Query 024021
Match_columns 274
No_of_seqs 191 out of 3120
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 16:49:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024021.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024021hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lcc_A Putative methyl chlorid 100.0 1.2E-27 4.1E-32 197.1 16.5 193 75-267 33-225 (235)
2 2gb4_A Thiopurine S-methyltran 99.9 6.3E-24 2.1E-28 176.5 16.5 175 75-250 33-228 (252)
3 1pjz_A Thiopurine S-methyltran 99.9 8.1E-24 2.8E-28 170.5 14.6 163 88-251 1-178 (203)
4 4gek_A TRNA (CMO5U34)-methyltr 99.9 4.5E-22 1.5E-26 166.1 15.2 152 98-250 60-246 (261)
5 2kw5_A SLR1183 protein; struct 99.9 1.9E-21 6.5E-26 156.1 14.2 186 77-271 1-193 (202)
6 3h2b_A SAM-dependent methyltra 99.9 1.3E-20 4.4E-25 151.4 17.0 148 95-251 31-184 (203)
7 4htf_A S-adenosylmethionine-de 99.8 5.4E-20 1.8E-24 155.5 17.2 152 98-251 58-234 (285)
8 3dtn_A Putative methyltransfer 99.8 7.8E-20 2.7E-24 150.0 16.4 146 107-255 43-220 (234)
9 3hem_A Cyclopropane-fatty-acyl 99.8 1.3E-19 4.3E-24 154.6 18.3 165 98-269 61-258 (302)
10 3g2m_A PCZA361.24; SAM-depende 99.8 2.9E-20 9.9E-25 158.3 14.1 159 95-253 69-278 (299)
11 3e23_A Uncharacterized protein 99.8 4.2E-20 1.4E-24 149.3 14.1 149 95-251 31-184 (211)
12 2p7i_A Hypothetical protein; p 99.8 3.7E-20 1.3E-24 152.9 14.0 136 107-249 41-199 (250)
13 3ujc_A Phosphoethanolamine N-m 99.8 8.2E-20 2.8E-24 152.5 16.0 155 95-252 41-209 (266)
14 3hnr_A Probable methyltransfer 99.8 6.3E-20 2.1E-24 149.1 14.8 139 107-250 44-202 (220)
15 2o57_A Putative sarcosine dime 99.8 2.3E-19 7.8E-24 152.5 18.7 142 107-250 81-235 (297)
16 2xvm_A Tellurite resistance pr 99.8 2E-19 6.7E-24 143.7 17.2 164 74-249 7-173 (199)
17 3ccf_A Cyclopropane-fatty-acyl 99.8 1.2E-19 4E-24 153.0 16.5 163 97-269 48-230 (279)
18 3sm3_A SAM-dependent methyltra 99.8 4.2E-20 1.5E-24 151.3 13.2 174 75-254 3-212 (235)
19 3ou2_A SAM-dependent methyltra 99.8 2.4E-19 8.2E-24 145.2 17.1 148 97-250 36-206 (218)
20 3vc1_A Geranyl diphosphate 2-C 99.8 1.5E-19 5.2E-24 154.8 16.7 141 107-250 116-270 (312)
21 1kpg_A CFA synthase;, cyclopro 99.8 1.3E-19 4.4E-24 153.3 16.0 152 98-251 53-230 (287)
22 3kkz_A Uncharacterized protein 99.8 8.6E-19 2.9E-23 146.7 20.2 153 95-250 31-197 (267)
23 3ocj_A Putative exported prote 99.8 3.6E-19 1.2E-23 152.0 17.6 144 106-249 116-291 (305)
24 3bus_A REBM, methyltransferase 99.8 4.5E-19 1.6E-23 148.8 17.6 154 98-253 50-220 (273)
25 1nkv_A Hypothetical protein YJ 99.8 4.6E-19 1.6E-23 147.3 16.9 152 95-248 22-186 (256)
26 3jwg_A HEN1, methyltransferase 99.8 2.3E-19 8E-24 145.7 14.7 160 107-267 28-209 (219)
27 3l8d_A Methyltransferase; stru 99.8 1.9E-19 6.6E-24 148.3 14.1 140 106-251 51-202 (242)
28 1vl5_A Unknown conserved prote 99.8 4.8E-19 1.6E-23 147.7 16.7 143 107-252 36-193 (260)
29 2a14_A Indolethylamine N-methy 99.8 4.3E-20 1.5E-24 154.5 10.1 177 74-250 17-239 (263)
30 2ex4_A Adrenal gland protein A 99.8 3.9E-19 1.3E-23 146.6 15.1 142 108-250 79-226 (241)
31 3dh0_A SAM dependent methyltra 99.8 4E-19 1.4E-23 144.2 14.9 141 107-250 36-182 (219)
32 3jwh_A HEN1; methyltransferase 99.8 5.6E-19 1.9E-23 143.3 15.6 140 107-246 28-189 (217)
33 3pfg_A N-methyltransferase; N, 99.8 6.6E-19 2.3E-23 147.1 16.3 145 98-248 40-236 (263)
34 2fk8_A Methoxy mycolic acid sy 99.8 5.2E-19 1.8E-23 151.8 16.1 152 98-251 79-256 (318)
35 1xtp_A LMAJ004091AAA; SGPP, st 99.8 6.3E-19 2.1E-23 146.2 15.7 150 98-250 82-239 (254)
36 1xxl_A YCGJ protein; structura 99.8 1E-18 3.5E-23 144.0 16.2 144 106-252 19-177 (239)
37 3g5l_A Putative S-adenosylmeth 99.8 3.9E-19 1.3E-23 147.6 13.6 142 107-254 43-221 (253)
38 3m70_A Tellurite resistance pr 99.8 1.6E-18 5.6E-23 146.5 17.4 149 95-249 109-260 (286)
39 3dli_A Methyltransferase; PSI- 99.8 3.6E-19 1.2E-23 146.8 12.7 135 107-250 40-185 (240)
40 1y8c_A S-adenosylmethionine-de 99.8 3.7E-19 1.3E-23 146.7 12.3 152 96-249 25-225 (246)
41 3dlc_A Putative S-adenosyl-L-m 99.8 1.1E-19 3.8E-24 147.2 8.7 149 99-249 34-203 (219)
42 3f4k_A Putative methyltransfer 99.8 1.7E-18 5.8E-23 143.9 15.8 152 96-250 32-197 (257)
43 3e8s_A Putative SAM dependent 99.8 7.2E-19 2.5E-23 143.1 12.5 135 107-251 51-211 (227)
44 3ggd_A SAM-dependent methyltra 99.8 1.6E-18 5.3E-23 143.3 14.1 140 107-252 55-222 (245)
45 3dp7_A SAM-dependent methyltra 99.8 3.3E-18 1.1E-22 149.5 16.5 140 108-248 179-341 (363)
46 2p8j_A S-adenosylmethionine-de 99.8 1.9E-18 6.4E-23 139.2 13.0 142 107-250 22-184 (209)
47 2r3s_A Uncharacterized protein 99.8 5.8E-18 2E-22 146.2 16.9 143 107-250 164-324 (335)
48 2i62_A Nicotinamide N-methyltr 99.8 1.1E-18 3.9E-23 145.5 11.9 177 75-251 19-241 (265)
49 3i53_A O-methyltransferase; CO 99.8 7.6E-18 2.6E-22 145.5 17.3 140 109-250 170-322 (332)
50 3cgg_A SAM-dependent methyltra 99.8 8.2E-18 2.8E-22 133.5 15.9 130 106-249 44-175 (195)
51 3i9f_A Putative type 11 methyl 99.8 2.5E-18 8.5E-23 134.1 12.5 132 107-250 16-149 (170)
52 1ri5_A MRNA capping enzyme; me 99.8 5.2E-18 1.8E-22 143.9 15.2 148 106-253 62-254 (298)
53 3mti_A RRNA methylase; SAM-dep 99.8 5.4E-18 1.9E-22 134.0 14.1 153 95-250 9-170 (185)
54 3gwz_A MMCR; methyltransferase 99.8 1.5E-17 5E-22 145.8 18.2 139 108-248 202-355 (369)
55 3gu3_A Methyltransferase; alph 99.8 7E-18 2.4E-22 142.6 15.4 135 107-246 21-187 (284)
56 3mgg_A Methyltransferase; NYSG 99.8 6.2E-18 2.1E-22 142.1 14.8 157 96-255 23-204 (276)
57 3mcz_A O-methyltransferase; ad 99.8 7.7E-18 2.6E-22 146.6 15.5 137 109-246 180-336 (352)
58 2p35_A Trans-aconitate 2-methy 99.8 9.7E-18 3.3E-22 139.4 15.5 162 97-268 21-207 (259)
59 2g72_A Phenylethanolamine N-me 99.8 7.2E-18 2.5E-22 142.8 14.6 154 98-251 61-258 (289)
60 3bkw_A MLL3908 protein, S-aden 99.8 2.7E-18 9.4E-23 141.3 11.6 138 107-250 42-215 (243)
61 3ege_A Putative methyltransfer 99.8 3E-18 1E-22 143.0 11.7 140 107-257 33-186 (261)
62 1ve3_A Hypothetical protein PH 99.8 1.5E-17 5.3E-22 135.4 14.6 142 107-250 37-216 (227)
63 3g07_A 7SK snRNA methylphospha 99.8 4.2E-18 1.4E-22 144.5 11.5 143 107-249 45-269 (292)
64 3bxo_A N,N-dimethyltransferase 99.8 1.6E-17 5.4E-22 136.4 14.6 112 98-215 30-143 (239)
65 2pxx_A Uncharacterized protein 99.8 1.7E-17 5.9E-22 133.9 14.3 153 74-241 6-175 (215)
66 2ip2_A Probable phenazine-spec 99.7 1.6E-17 5.4E-22 143.5 14.7 149 99-249 158-322 (334)
67 1x19_A CRTF-related protein; m 99.7 6E-17 2E-21 141.3 18.4 150 99-250 180-349 (359)
68 2yqz_A Hypothetical protein TT 99.7 1.9E-17 6.6E-22 137.8 14.5 140 107-251 38-198 (263)
69 3ofk_A Nodulation protein S; N 99.7 1.7E-17 5.8E-22 134.3 13.7 128 107-238 50-178 (216)
70 3d2l_A SAM-dependent methyltra 99.7 2.2E-17 7.5E-22 135.9 14.5 140 107-249 32-223 (243)
71 3thr_A Glycine N-methyltransfe 99.7 2.6E-17 8.9E-22 139.5 14.8 117 96-214 47-176 (293)
72 1qzz_A RDMB, aclacinomycin-10- 99.7 2.7E-17 9.4E-22 144.2 15.4 142 107-250 181-340 (374)
73 3njr_A Precorrin-6Y methylase; 99.7 3.3E-17 1.1E-21 131.8 14.3 127 106-249 53-180 (204)
74 4hg2_A Methyltransferase type 99.7 7.2E-18 2.5E-22 140.2 10.7 108 99-216 30-138 (257)
75 4a6d_A Hydroxyindole O-methylt 99.7 2.3E-16 7.9E-21 137.2 20.7 147 100-249 170-334 (353)
76 3bkx_A SAM-dependent methyltra 99.7 2.6E-17 8.8E-22 138.2 13.6 141 107-249 42-219 (275)
77 4fsd_A Arsenic methyltransfera 99.7 2.1E-17 7.2E-22 145.4 13.5 139 108-248 83-250 (383)
78 3grz_A L11 mtase, ribosomal pr 99.7 1.8E-17 6.3E-22 133.1 12.0 127 106-249 58-185 (205)
79 3q87_B N6 adenine specific DNA 99.7 3.9E-17 1.3E-21 127.6 13.5 124 107-252 22-152 (170)
80 3cc8_A Putative methyltransfer 99.7 1.4E-16 4.9E-21 129.7 16.8 137 107-253 31-189 (230)
81 1tw3_A COMT, carminomycin 4-O- 99.7 5E-17 1.7E-21 141.8 14.9 142 107-250 182-340 (360)
82 3orh_A Guanidinoacetate N-meth 99.7 2.7E-18 9.3E-23 141.3 6.5 157 96-254 48-215 (236)
83 1wzn_A SAM-dependent methyltra 99.7 2E-16 6.7E-21 131.1 17.0 115 97-213 29-145 (252)
84 3lst_A CALO1 methyltransferase 99.7 7.1E-17 2.4E-21 140.3 14.1 136 108-248 184-335 (348)
85 3g5t_A Trans-aconitate 3-methy 99.7 7.8E-17 2.7E-21 137.1 14.0 142 98-242 26-197 (299)
86 3evz_A Methyltransferase; NYSG 99.7 1.3E-16 4.3E-21 130.5 14.5 136 102-248 49-205 (230)
87 2vdw_A Vaccinia virus capping 99.7 4.4E-17 1.5E-21 138.7 12.1 143 108-250 48-247 (302)
88 1zx0_A Guanidinoacetate N-meth 99.7 1E-17 3.4E-22 137.7 7.5 136 106-243 58-204 (236)
89 3e05_A Precorrin-6Y C5,15-meth 99.7 2.1E-16 7.1E-21 126.9 14.6 128 99-242 30-161 (204)
90 3hm2_A Precorrin-6Y C5,15-meth 99.7 1.1E-16 3.8E-21 125.4 12.7 125 107-248 24-152 (178)
91 2nxc_A L11 mtase, ribosomal pr 99.7 4.3E-17 1.5E-21 135.5 10.7 132 100-248 112-243 (254)
92 1vlm_A SAM-dependent methyltra 99.7 1.5E-16 5.2E-21 129.2 13.7 128 109-250 48-189 (219)
93 3lpm_A Putative methyltransfer 99.7 2.1E-16 7.2E-21 131.7 14.9 132 108-250 49-202 (259)
94 2b3t_A Protein methyltransfera 99.7 1.4E-16 4.8E-21 134.0 13.6 139 97-247 98-261 (276)
95 2gs9_A Hypothetical protein TT 99.7 5.1E-16 1.7E-20 125.1 16.3 129 99-240 27-171 (211)
96 3eey_A Putative rRNA methylase 99.7 1.5E-16 5E-21 127.0 12.7 147 100-251 14-175 (197)
97 1yzh_A TRNA (guanine-N(7)-)-me 99.7 1.3E-16 4.6E-21 129.0 12.4 131 107-248 40-181 (214)
98 1dus_A MJ0882; hypothetical pr 99.7 4.9E-16 1.7E-20 123.1 15.3 138 96-245 39-178 (194)
99 1l3i_A Precorrin-6Y methyltran 99.7 2.1E-16 7.3E-21 125.0 12.2 126 106-246 31-157 (192)
100 3reo_A (ISO)eugenol O-methyltr 99.7 5.4E-16 1.8E-20 135.7 15.8 132 109-250 204-356 (368)
101 1jsx_A Glucose-inhibited divis 99.7 5.7E-16 1.9E-20 124.5 14.2 123 108-250 65-189 (207)
102 1xdz_A Methyltransferase GIDB; 99.7 2.4E-16 8.3E-21 129.8 11.6 130 108-252 70-205 (240)
103 4df3_A Fibrillarin-like rRNA/T 99.7 6.2E-16 2.1E-20 125.8 13.8 136 106-249 75-217 (233)
104 2aot_A HMT, histamine N-methyl 99.7 4.3E-16 1.5E-20 132.0 13.4 138 108-247 52-219 (292)
105 3fpf_A Mtnas, putative unchara 99.7 1.6E-16 5.5E-21 133.2 10.4 103 106-215 120-224 (298)
106 3bgv_A MRNA CAP guanine-N7 met 99.7 5.6E-16 1.9E-20 132.6 14.0 144 107-250 33-233 (313)
107 3p9c_A Caffeic acid O-methyltr 99.7 8.4E-16 2.9E-20 134.3 15.0 133 108-250 201-354 (364)
108 2qe6_A Uncharacterized protein 99.7 7.6E-16 2.6E-20 129.3 14.1 132 109-245 78-238 (274)
109 2frn_A Hypothetical protein PH 99.7 4.1E-16 1.4E-20 131.3 12.5 131 106-246 123-254 (278)
110 3fzg_A 16S rRNA methylase; met 99.7 2.4E-16 8.2E-21 123.0 9.7 136 107-247 48-186 (200)
111 2yxd_A Probable cobalt-precorr 99.7 5.2E-16 1.8E-20 121.8 11.9 123 107-248 34-156 (183)
112 3m33_A Uncharacterized protein 99.7 3.2E-16 1.1E-20 128.0 10.9 133 95-252 35-170 (226)
113 3htx_A HEN1; HEN1, small RNA m 99.7 1.9E-15 6.5E-20 140.7 17.2 159 107-267 720-916 (950)
114 3kr9_A SAM-dependent methyltra 99.7 1.7E-15 5.8E-20 122.6 14.8 126 106-247 13-141 (225)
115 3iv6_A Putative Zn-dependent a 99.7 7.6E-16 2.6E-20 127.8 12.9 115 98-215 34-150 (261)
116 3lec_A NADB-rossmann superfami 99.7 2E-15 6.9E-20 122.4 14.9 136 95-247 9-147 (230)
117 3dmg_A Probable ribosomal RNA 99.7 3E-15 1E-19 131.1 16.5 135 107-252 232-376 (381)
118 1fp1_D Isoliquiritigenin 2'-O- 99.6 1.1E-15 3.8E-20 133.9 13.1 132 108-249 209-360 (372)
119 3g89_A Ribosomal RNA small sub 99.6 4.3E-16 1.5E-20 129.0 9.9 131 108-253 80-216 (249)
120 1fbn_A MJ fibrillarin homologu 99.6 1.2E-15 4.2E-20 124.8 12.4 133 108-249 74-213 (230)
121 1fp2_A Isoflavone O-methyltran 99.6 8.5E-16 2.9E-20 133.7 11.9 131 108-248 188-340 (352)
122 3p9n_A Possible methyltransfer 99.6 1.9E-15 6.4E-20 119.8 12.9 108 107-216 43-156 (189)
123 2fca_A TRNA (guanine-N(7)-)-me 99.6 8.5E-16 2.9E-20 124.3 10.9 130 108-248 38-178 (213)
124 3gnl_A Uncharacterized protein 99.6 3.6E-15 1.2E-19 121.8 14.0 136 95-247 9-147 (244)
125 4e2x_A TCAB9; kijanose, tetron 99.6 3.4E-16 1.2E-20 139.2 8.6 147 98-250 96-254 (416)
126 2ozv_A Hypothetical protein AT 99.6 2.9E-15 1E-19 124.9 13.5 130 107-248 35-193 (260)
127 4dzr_A Protein-(glutamine-N5) 99.6 9.4E-17 3.2E-21 129.4 4.2 130 107-248 29-191 (215)
128 3p2e_A 16S rRNA methylase; met 99.6 2.9E-16 9.9E-21 128.1 7.0 146 106-252 22-188 (225)
129 3mb5_A SAM-dependent methyltra 99.6 9E-16 3.1E-20 127.4 8.4 125 107-248 92-221 (255)
130 3bzb_A Uncharacterized protein 99.6 1.3E-14 4.4E-19 122.3 15.5 135 107-248 78-236 (281)
131 3ntv_A MW1564 protein; rossman 99.6 5.1E-15 1.7E-19 121.3 12.2 102 107-213 70-176 (232)
132 1yb2_A Hypothetical protein TA 99.6 1.8E-15 6E-20 127.2 9.4 124 107-248 109-236 (275)
133 3lbf_A Protein-L-isoaspartate 99.6 8.1E-15 2.8E-19 118.0 12.7 100 107-215 76-176 (210)
134 2zfu_A Nucleomethylin, cerebra 99.6 3.6E-15 1.2E-19 120.5 10.6 112 107-248 66-178 (215)
135 3id6_C Fibrillarin-like rRNA/T 99.6 2.4E-14 8.1E-19 116.7 15.4 135 107-249 75-216 (232)
136 2avn_A Ubiquinone/menaquinone 99.6 5.8E-15 2E-19 122.9 12.1 142 98-250 44-214 (260)
137 3bwc_A Spermidine synthase; SA 99.6 5.9E-15 2E-19 125.7 12.2 137 107-249 94-240 (304)
138 1g8a_A Fibrillarin-like PRE-rR 99.6 1.8E-14 6.1E-19 117.5 14.3 133 108-249 73-212 (227)
139 2ipx_A RRNA 2'-O-methyltransfe 99.6 3.7E-15 1.3E-19 122.1 10.2 132 108-248 77-216 (233)
140 2ift_A Putative methylase HI07 99.6 2.8E-15 9.6E-20 120.2 9.1 106 108-216 53-166 (201)
141 1nt2_A Fibrillarin-like PRE-rR 99.6 5.7E-15 2E-19 119.1 10.9 131 107-250 56-196 (210)
142 2igt_A SAM dependent methyltra 99.6 8.9E-15 3E-19 126.0 12.6 129 108-244 153-299 (332)
143 4dcm_A Ribosomal RNA large sub 99.6 1.4E-14 4.6E-19 126.8 13.7 115 100-214 213-335 (375)
144 3hp7_A Hemolysin, putative; st 99.6 1.6E-15 5.5E-20 127.3 7.4 159 97-268 72-249 (291)
145 1zg3_A Isoflavanone 4'-O-methy 99.6 7.3E-15 2.5E-19 128.0 11.9 131 108-248 193-346 (358)
146 3u81_A Catechol O-methyltransf 99.6 4E-15 1.4E-19 120.9 9.3 127 107-246 57-194 (221)
147 3dxy_A TRNA (guanine-N(7)-)-me 99.6 5.2E-15 1.8E-19 120.1 9.6 105 108-213 34-150 (218)
148 2fhp_A Methylase, putative; al 99.6 6.8E-15 2.3E-19 116.0 10.0 107 107-216 43-157 (187)
149 1af7_A Chemotaxis receptor met 99.6 8E-15 2.7E-19 122.6 10.6 105 108-212 105-251 (274)
150 1ws6_A Methyltransferase; stru 99.6 1.9E-15 6.4E-20 117.5 6.3 103 108-216 41-150 (171)
151 3giw_A Protein of unknown func 99.6 1.6E-14 5.4E-19 119.8 12.1 133 110-245 80-243 (277)
152 3mq2_A 16S rRNA methyltransfer 99.6 8.5E-15 2.9E-19 118.6 9.9 141 106-250 25-185 (218)
153 3q7e_A Protein arginine N-meth 99.6 9.4E-15 3.2E-19 126.9 10.8 104 107-211 65-171 (349)
154 2y1w_A Histone-arginine methyl 99.6 1.5E-14 5E-19 125.6 12.0 105 107-212 49-154 (348)
155 1o9g_A RRNA methyltransferase; 99.6 6.8E-15 2.3E-19 121.8 9.2 108 108-215 51-216 (250)
156 2esr_A Methyltransferase; stru 99.6 9.5E-15 3.2E-19 114.4 9.5 107 107-216 30-141 (177)
157 4hc4_A Protein arginine N-meth 99.6 1.1E-14 3.7E-19 126.7 10.6 104 107-211 82-187 (376)
158 2pwy_A TRNA (adenine-N(1)-)-me 99.6 9.4E-15 3.2E-19 121.3 9.8 124 107-248 95-223 (258)
159 1wy7_A Hypothetical protein PH 99.6 6.7E-14 2.3E-18 112.3 14.4 129 107-251 48-177 (207)
160 1o54_A SAM-dependent O-methylt 99.6 8.5E-15 2.9E-19 123.1 9.5 125 107-248 111-238 (277)
161 1vbf_A 231AA long hypothetical 99.6 2.4E-14 8.2E-19 116.9 12.0 106 100-216 61-168 (231)
162 3gdh_A Trimethylguanosine synt 99.6 3.1E-16 1E-20 129.1 0.2 137 108-246 78-216 (241)
163 3k6r_A Putative transferase PH 99.6 2.7E-14 9.4E-19 119.3 12.0 132 106-247 123-255 (278)
164 3r0q_C Probable protein argini 99.6 1.2E-14 4.2E-19 127.4 10.3 106 107-213 62-169 (376)
165 2fyt_A Protein arginine N-meth 99.6 2.7E-14 9.2E-19 123.5 11.9 103 107-210 63-168 (340)
166 3duw_A OMT, O-methyltransferas 99.5 1.5E-14 5.1E-19 117.6 9.5 103 107-214 57-168 (223)
167 2fpo_A Methylase YHHF; structu 99.5 1.6E-14 5.5E-19 115.8 9.5 105 108-216 54-163 (202)
168 3tfw_A Putative O-methyltransf 99.5 3.8E-14 1.3E-18 117.3 11.8 103 107-214 62-171 (248)
169 3dr5_A Putative O-methyltransf 99.5 1.5E-14 5.1E-19 117.6 8.8 99 110-213 58-163 (221)
170 3tr6_A O-methyltransferase; ce 99.5 1.7E-14 5.9E-19 117.3 8.5 104 107-215 63-176 (225)
171 2yxe_A Protein-L-isoaspartate 99.5 4.6E-14 1.6E-18 114.0 10.9 100 107-215 76-179 (215)
172 3b3j_A Histone-arginine methyl 99.5 3.4E-14 1.1E-18 128.0 11.0 104 107-211 157-261 (480)
173 2h00_A Methyltransferase 10 do 99.5 5E-13 1.7E-17 110.8 17.2 143 108-250 65-239 (254)
174 3ckk_A TRNA (guanine-N(7)-)-me 99.5 6.2E-14 2.1E-18 115.0 11.4 127 108-244 46-190 (235)
175 1g6q_1 HnRNP arginine N-methyl 99.5 5E-14 1.7E-18 121.3 10.7 103 107-210 37-142 (328)
176 1ne2_A Hypothetical protein TA 99.5 2.2E-13 7.5E-18 108.8 13.7 121 107-250 50-171 (200)
177 3tm4_A TRNA (guanine N2-)-meth 99.5 1.7E-13 5.8E-18 120.0 14.1 128 106-248 215-351 (373)
178 2pjd_A Ribosomal RNA small sub 99.5 5.3E-14 1.8E-18 121.9 10.5 114 98-214 185-304 (343)
179 1sui_A Caffeoyl-COA O-methyltr 99.5 5.3E-14 1.8E-18 116.3 10.1 102 107-213 78-190 (247)
180 3tma_A Methyltransferase; thum 99.5 1.4E-13 4.8E-18 119.7 13.2 127 107-248 202-338 (354)
181 1nv8_A HEMK protein; class I a 99.5 7.8E-14 2.7E-18 117.6 11.1 120 108-239 123-264 (284)
182 3r3h_A O-methyltransferase, SA 99.5 1.1E-14 3.8E-19 120.0 5.6 104 107-215 59-172 (242)
183 1p91_A Ribosomal RNA large sub 99.5 1.6E-13 5.6E-18 114.6 12.5 129 107-254 84-221 (269)
184 3lcv_B Sisomicin-gentamicin re 99.5 1E-13 3.5E-18 113.1 10.6 139 107-248 131-271 (281)
185 3uwp_A Histone-lysine N-methyl 99.5 6.5E-14 2.2E-18 121.9 9.9 118 96-216 160-291 (438)
186 2yvl_A TRMI protein, hypotheti 99.5 8.4E-14 2.9E-18 114.8 10.2 124 107-248 90-214 (248)
187 2b78_A Hypothetical protein SM 99.5 2.6E-13 8.7E-18 119.3 13.4 137 107-248 211-361 (385)
188 3adn_A Spermidine synthase; am 99.5 2E-13 6.7E-18 115.5 12.2 133 107-246 82-224 (294)
189 2gpy_A O-methyltransferase; st 99.5 8E-14 2.7E-18 114.1 9.4 102 107-213 53-160 (233)
190 1dl5_A Protein-L-isoaspartate 99.5 1.1E-13 3.8E-18 118.6 10.5 110 98-216 64-178 (317)
191 1jg1_A PIMT;, protein-L-isoasp 99.5 2.2E-13 7.4E-18 111.7 11.7 101 106-215 89-191 (235)
192 3c3p_A Methyltransferase; NP_9 99.5 7.8E-14 2.7E-18 112.3 8.8 100 108-213 56-160 (210)
193 2ld4_A Anamorsin; methyltransf 99.5 1.1E-13 3.7E-18 108.3 9.1 119 106-248 10-133 (176)
194 2qm3_A Predicted methyltransfe 99.5 1E-12 3.5E-17 115.0 15.9 128 107-248 171-308 (373)
195 3opn_A Putative hemolysin; str 99.5 1.6E-14 5.4E-19 118.2 3.6 147 97-252 24-187 (232)
196 2yx1_A Hypothetical protein MJ 99.5 3E-13 1E-17 116.8 11.7 122 107-248 194-316 (336)
197 3c3y_A Pfomt, O-methyltransfer 99.5 1.2E-13 4.1E-18 113.5 8.6 102 107-213 69-181 (237)
198 1ixk_A Methyltransferase; open 99.5 5.6E-13 1.9E-17 114.0 12.9 134 106-247 116-273 (315)
199 3ajd_A Putative methyltransfer 99.5 3.1E-13 1.1E-17 113.4 11.1 143 95-247 72-239 (274)
200 3frh_A 16S rRNA methylase; met 99.5 5.9E-13 2E-17 107.6 12.1 135 107-246 104-239 (253)
201 4azs_A Methyltransferase WBDD; 99.5 8.2E-14 2.8E-18 128.4 7.8 108 108-216 66-176 (569)
202 1i1n_A Protein-L-isoaspartate 99.5 6.5E-13 2.2E-17 108.0 12.3 102 106-215 75-184 (226)
203 2hnk_A SAM-dependent O-methylt 99.5 1.2E-13 4E-18 113.6 7.6 102 107-213 59-181 (239)
204 2pbf_A Protein-L-isoaspartate 99.4 2.6E-13 8.9E-18 110.5 9.6 102 106-215 78-195 (227)
205 3a27_A TYW2, uncharacterized p 99.4 4.9E-13 1.7E-17 112.1 11.4 105 106-217 117-223 (272)
206 1u2z_A Histone-lysine N-methyl 99.4 7E-13 2.4E-17 117.2 12.7 114 97-213 230-359 (433)
207 1i9g_A Hypothetical protein RV 99.4 1.7E-13 5.7E-18 115.2 8.4 124 107-247 98-228 (280)
208 3c0k_A UPF0064 protein YCCW; P 99.4 3.9E-13 1.3E-17 118.6 11.1 136 107-247 219-368 (396)
209 2avd_A Catechol-O-methyltransf 99.4 2E-13 6.7E-18 111.3 8.5 103 107-214 68-180 (229)
210 2as0_A Hypothetical protein PH 99.4 5.4E-13 1.8E-17 117.8 12.0 140 99-247 208-364 (396)
211 3cbg_A O-methyltransferase; cy 99.4 1.6E-13 5.6E-18 112.3 7.6 102 108-214 72-183 (232)
212 2i7c_A Spermidine synthase; tr 99.4 1.2E-12 4.1E-17 110.3 12.6 132 108-246 78-218 (283)
213 2vdv_E TRNA (guanine-N(7)-)-me 99.4 9E-13 3.1E-17 108.8 11.4 105 108-213 49-173 (246)
214 2pt6_A Spermidine synthase; tr 99.4 6.5E-13 2.2E-17 113.8 10.9 133 108-247 116-257 (321)
215 2f8l_A Hypothetical protein LM 99.4 1.7E-13 5.9E-18 118.7 7.3 128 108-243 130-280 (344)
216 1iy9_A Spermidine synthase; ro 99.4 8.6E-13 2.9E-17 110.7 11.2 133 108-247 75-216 (275)
217 1r18_A Protein-L-isoaspartate( 99.4 2.5E-13 8.7E-18 110.7 7.8 102 106-215 82-196 (227)
218 4dmg_A Putative uncharacterize 99.4 2E-12 7E-17 113.5 13.9 140 98-248 204-356 (393)
219 1wxx_A TT1595, hypothetical pr 99.4 8.5E-13 2.9E-17 115.9 11.2 141 99-247 202-354 (382)
220 1ej0_A FTSJ; methyltransferase 99.4 6.1E-13 2.1E-17 103.4 9.2 118 107-247 21-159 (180)
221 3v97_A Ribosomal RNA large sub 99.4 4.5E-13 1.5E-17 125.9 9.7 134 107-251 538-684 (703)
222 1uwv_A 23S rRNA (uracil-5-)-me 99.4 3.1E-12 1.1E-16 114.1 14.2 142 107-267 285-431 (433)
223 1mjf_A Spermidine synthase; sp 99.4 7.9E-13 2.7E-17 111.3 9.7 106 107-213 74-193 (281)
224 2plw_A Ribosomal RNA methyltra 99.4 3.4E-12 1.2E-16 101.8 12.9 117 107-246 21-176 (201)
225 3dou_A Ribosomal RNA large sub 99.4 4.2E-12 1.4E-16 100.8 12.9 119 107-248 24-163 (191)
226 2b25_A Hypothetical protein; s 99.4 1.8E-12 6.1E-17 111.9 11.7 103 106-215 103-221 (336)
227 1uir_A Polyamine aminopropyltr 99.4 1.9E-12 6.4E-17 110.7 11.6 133 108-246 77-222 (314)
228 3gjy_A Spermidine synthase; AP 99.4 1.3E-12 4.4E-17 110.9 10.3 104 110-214 91-201 (317)
229 2b2c_A Spermidine synthase; be 99.4 9.2E-13 3.1E-17 112.4 9.0 106 108-213 108-222 (314)
230 1inl_A Spermidine synthase; be 99.4 1.5E-12 5.2E-17 110.4 10.3 132 108-246 90-231 (296)
231 2o07_A Spermidine synthase; st 99.4 1.4E-12 4.7E-17 110.9 10.1 107 107-213 94-209 (304)
232 1xj5_A Spermidine synthase 1; 99.4 1.6E-12 5.6E-17 111.7 10.5 107 107-213 119-235 (334)
233 1zq9_A Probable dimethyladenos 99.4 1.7E-12 5.8E-17 109.5 9.3 112 97-210 16-144 (285)
234 2jjq_A Uncharacterized RNA met 99.3 2E-11 7E-16 108.3 15.7 99 107-213 289-387 (425)
235 2bm8_A Cephalosporin hydroxyla 99.3 5.4E-13 1.9E-17 109.4 5.1 120 108-244 81-214 (236)
236 2yxl_A PH0851 protein, 450AA l 99.3 1.4E-11 4.9E-16 110.3 14.3 134 106-247 257-417 (450)
237 3m6w_A RRNA methylase; rRNA me 99.3 5.4E-12 1.8E-16 112.6 10.8 142 95-247 90-257 (464)
238 3sso_A Methyltransferase; macr 99.3 3.7E-12 1.3E-16 110.6 8.6 108 95-215 203-326 (419)
239 3m4x_A NOL1/NOP2/SUN family pr 99.3 7.1E-12 2.4E-16 111.7 10.6 143 95-247 94-261 (456)
240 3bt7_A TRNA (uracil-5-)-methyl 99.3 4.7E-12 1.6E-16 110.6 8.7 144 101-265 206-366 (369)
241 2ih2_A Modification methylase 99.3 1.2E-11 4.1E-16 109.8 10.1 132 94-241 24-186 (421)
242 2wa2_A Non-structural protein 99.3 2.2E-12 7.4E-17 108.1 4.8 114 98-215 71-195 (276)
243 2xyq_A Putative 2'-O-methyl tr 99.3 1.8E-11 6E-16 102.9 10.1 115 107-247 62-195 (290)
244 2oxt_A Nucleoside-2'-O-methylt 99.3 3.8E-12 1.3E-16 106.1 5.9 116 96-215 61-187 (265)
245 2h1r_A Dimethyladenosine trans 99.3 4.6E-11 1.6E-15 101.4 11.9 78 107-186 41-118 (299)
246 2frx_A Hypothetical protein YE 99.2 9.3E-11 3.2E-15 105.5 14.0 125 108-240 117-266 (479)
247 2cmg_A Spermidine synthase; tr 99.2 1.7E-11 5.6E-16 102.0 8.3 97 108-213 72-171 (262)
248 2nyu_A Putative ribosomal RNA 99.2 5E-11 1.7E-15 94.5 10.7 117 107-246 21-167 (196)
249 1sqg_A SUN protein, FMU protei 99.2 1.1E-10 3.8E-15 103.9 13.6 131 106-245 244-400 (429)
250 2okc_A Type I restriction enzy 99.2 1.7E-11 5.9E-16 109.7 8.3 122 93-214 155-308 (445)
251 2p41_A Type II methyltransfera 99.2 1E-11 3.5E-16 105.6 5.2 114 98-216 71-194 (305)
252 3ldu_A Putative methylase; str 99.2 1.5E-10 5E-15 101.6 12.4 113 101-213 187-344 (385)
253 3k0b_A Predicted N6-adenine-sp 99.2 1.2E-10 4E-15 102.4 11.6 107 107-213 200-350 (393)
254 3ldg_A Putative uncharacterize 99.2 1.7E-10 5.7E-15 101.0 12.5 107 107-213 193-343 (384)
255 1qam_A ERMC' methyltransferase 99.2 1.5E-10 5.2E-15 95.3 10.2 87 95-185 16-105 (244)
256 3b5i_A S-adenosyl-L-methionine 99.1 3.5E-09 1.2E-13 91.9 16.7 145 109-253 53-302 (374)
257 3axs_A Probable N(2),N(2)-dime 99.1 2.1E-10 7.2E-15 100.3 8.3 100 108-213 52-158 (392)
258 2b9e_A NOL1/NOP2/SUN domain fa 99.1 4.4E-09 1.5E-13 89.4 15.9 141 95-246 91-262 (309)
259 3cvo_A Methyltransferase-like 99.1 9.3E-10 3.2E-14 87.3 10.9 96 108-212 30-153 (202)
260 3gru_A Dimethyladenosine trans 99.1 3.5E-10 1.2E-14 95.4 8.8 87 96-185 37-125 (295)
261 2qfm_A Spermine synthase; sper 99.1 5.3E-10 1.8E-14 96.0 9.9 107 108-214 188-315 (364)
262 1yub_A Ermam, rRNA methyltrans 99.0 1.1E-11 3.8E-16 102.2 -1.4 111 98-213 18-145 (245)
263 3tqs_A Ribosomal RNA small sub 99.0 1.7E-09 5.7E-14 89.4 11.2 84 98-185 18-107 (255)
264 3fut_A Dimethyladenosine trans 99.0 1.4E-09 4.9E-14 90.5 10.4 95 97-197 35-132 (271)
265 2dul_A N(2),N(2)-dimethylguano 99.0 6E-10 2.1E-14 97.3 8.3 99 108-213 47-164 (378)
266 2efj_A 3,7-dimethylxanthine me 99.0 5.6E-09 1.9E-13 90.7 13.8 143 109-254 53-297 (384)
267 2r6z_A UPF0341 protein in RSP 99.0 1.4E-10 4.9E-15 96.1 3.6 79 108-186 83-173 (258)
268 4gqb_A Protein arginine N-meth 99.0 9.3E-10 3.2E-14 101.2 8.9 100 110-210 359-464 (637)
269 1m6e_X S-adenosyl-L-methionnin 99.0 7.2E-09 2.5E-13 89.3 13.4 144 110-253 53-284 (359)
270 3ll7_A Putative methyltransfer 99.0 9.8E-10 3.3E-14 96.4 7.5 88 96-184 81-173 (410)
271 2ar0_A M.ecoki, type I restric 98.9 5.4E-09 1.8E-13 95.5 11.5 122 93-214 153-313 (541)
272 3khk_A Type I restriction-modi 98.9 8.7E-10 3E-14 100.6 6.1 146 92-241 228-419 (544)
273 2qy6_A UPF0209 protein YFCK; s 98.9 1.3E-09 4.3E-14 90.2 5.3 127 108-248 60-234 (257)
274 3v97_A Ribosomal RNA large sub 98.9 9.4E-09 3.2E-13 96.7 11.1 108 107-214 189-348 (703)
275 3ua3_A Protein arginine N-meth 98.9 2E-09 6.9E-14 99.0 6.3 100 110-210 411-531 (745)
276 1m6y_A S-adenosyl-methyltransf 98.9 6E-09 2E-13 88.1 8.2 75 107-183 25-107 (301)
277 3lkd_A Type I restriction-modi 98.8 2.5E-08 8.5E-13 90.9 11.2 129 108-241 221-381 (542)
278 3o4f_A Spermidine synthase; am 98.8 5.2E-08 1.8E-12 81.5 12.0 107 107-213 82-198 (294)
279 3ftd_A Dimethyladenosine trans 98.8 1.9E-08 6.5E-13 82.8 8.6 85 96-185 18-106 (249)
280 2k4m_A TR8_protein, UPF0146 pr 98.7 1.3E-08 4.5E-13 75.3 5.5 98 97-217 24-125 (153)
281 3uzu_A Ribosomal RNA small sub 98.7 1.6E-08 5.5E-13 84.6 6.5 67 98-169 31-102 (279)
282 2oyr_A UPF0341 protein YHIQ; a 98.7 4.8E-09 1.7E-13 86.6 2.7 77 110-186 90-176 (258)
283 1qyr_A KSGA, high level kasuga 98.6 2.2E-08 7.5E-13 82.6 4.9 74 107-185 20-101 (252)
284 3evf_A RNA-directed RNA polyme 98.6 9.9E-08 3.4E-12 78.4 8.6 142 95-248 60-210 (277)
285 3s1s_A Restriction endonucleas 98.6 2.4E-07 8.3E-12 86.7 11.9 137 108-249 321-496 (878)
286 3c6k_A Spermine synthase; sper 98.5 3.7E-07 1.3E-11 78.7 7.8 131 108-246 205-356 (381)
287 3gcz_A Polyprotein; flavivirus 98.4 3.9E-07 1.3E-11 75.0 7.2 141 95-248 76-227 (282)
288 2wk1_A NOVP; transferase, O-me 98.4 5.5E-07 1.9E-11 75.1 8.2 125 107-243 105-266 (282)
289 1wg8_A Predicted S-adenosylmet 98.4 2E-06 6.9E-11 71.1 10.2 81 95-182 11-97 (285)
290 4auk_A Ribosomal RNA large sub 98.4 2.5E-06 8.5E-11 73.3 10.7 125 106-243 209-334 (375)
291 4fzv_A Putative methyltransfer 98.3 3E-06 1E-10 73.1 10.7 126 106-238 146-302 (359)
292 3ufb_A Type I restriction-modi 98.3 4.9E-06 1.7E-10 75.8 10.8 122 92-214 200-363 (530)
293 3eld_A Methyltransferase; flav 98.2 4.5E-06 1.5E-10 69.1 8.8 140 96-248 68-217 (300)
294 3vyw_A MNMC2; tRNA wobble urid 98.2 9.2E-06 3.2E-10 68.1 10.8 126 109-248 97-247 (308)
295 2px2_A Genome polyprotein [con 98.1 4.5E-06 1.5E-10 67.6 6.5 111 98-215 62-185 (269)
296 3p8z_A Mtase, non-structural p 98.1 6E-05 2.1E-09 60.2 12.3 118 96-217 65-190 (267)
297 2zig_A TTHA0409, putative modi 98.1 6.4E-06 2.2E-10 69.5 7.3 61 93-153 220-280 (297)
298 3lkz_A Non-structural protein 98.0 5.2E-05 1.8E-09 62.6 11.3 118 95-216 80-207 (321)
299 1rjd_A PPM1P, carboxy methyl t 97.9 0.00032 1.1E-08 59.9 13.7 141 98-242 89-281 (334)
300 3r24_A NSP16, 2'-O-methyl tran 97.8 0.00027 9.2E-09 58.3 10.9 126 98-248 96-240 (344)
301 2uyo_A Hypothetical protein ML 97.8 0.0016 5.4E-08 55.0 16.1 134 110-244 104-274 (310)
302 1g60_A Adenine-specific methyl 97.7 5.5E-05 1.9E-09 62.4 7.0 63 92-154 196-258 (260)
303 2oo3_A Protein involved in cat 97.7 6.4E-05 2.2E-09 62.2 6.3 123 108-243 91-220 (283)
304 1g55_A DNA cytosine methyltran 97.5 0.00024 8.3E-09 61.0 7.6 124 110-246 3-146 (343)
305 3g7u_A Cytosine-specific methy 97.5 0.001 3.5E-08 57.8 11.5 123 110-243 3-145 (376)
306 3tka_A Ribosomal RNA small sub 97.5 0.00079 2.7E-08 57.0 10.2 72 106-182 55-136 (347)
307 2vz8_A Fatty acid synthase; tr 97.3 8E-05 2.8E-09 78.9 2.4 133 107-246 1239-1392(2512)
308 2c7p_A Modification methylase 97.2 0.0023 8E-08 54.4 10.6 125 109-246 11-150 (327)
309 1i4w_A Mitochondrial replicati 97.2 0.00065 2.2E-08 58.3 6.5 56 109-168 59-116 (353)
310 3pvc_A TRNA 5-methylaminomethy 97.1 0.00035 1.2E-08 65.7 4.9 125 109-247 59-231 (689)
311 3qv2_A 5-cytosine DNA methyltr 97.1 0.0017 5.8E-08 55.3 8.2 128 109-248 10-159 (327)
312 3ps9_A TRNA 5-methylaminomethy 97.0 0.0011 3.6E-08 62.3 6.8 125 109-247 67-239 (676)
313 3iei_A Leucine carboxyl methyl 97.0 0.026 8.8E-07 48.0 14.7 141 109-251 91-283 (334)
314 3tos_A CALS11; methyltransfera 96.9 0.01 3.6E-07 48.4 11.0 131 107-247 68-245 (257)
315 1boo_A Protein (N-4 cytosine-s 96.9 0.0019 6.6E-08 54.9 7.0 64 91-154 235-298 (323)
316 3ubt_Y Modification methylase 96.8 0.0094 3.2E-07 50.6 10.7 126 110-247 1-141 (331)
317 3fwz_A Inner membrane protein 96.6 0.026 9E-07 41.4 10.5 109 110-245 8-123 (140)
318 1eg2_A Modification methylase 96.6 0.0029 9.9E-08 53.6 5.9 62 92-153 226-290 (319)
319 4h0n_A DNMT2; SAH binding, tra 96.6 0.0025 8.6E-08 54.3 5.3 125 110-248 4-148 (333)
320 2zig_A TTHA0409, putative modi 96.2 0.013 4.5E-07 49.0 7.7 92 157-248 20-135 (297)
321 3llv_A Exopolyphosphatase-rela 96.1 0.11 3.9E-06 37.7 11.5 105 109-243 6-119 (141)
322 3me5_A Cytosine-specific methy 96.1 0.032 1.1E-06 49.9 9.7 127 110-244 89-255 (482)
323 2qrv_A DNA (cytosine-5)-methyl 95.8 0.022 7.6E-07 47.6 7.1 71 108-184 15-93 (295)
324 2py6_A Methyltransferase FKBM; 95.6 0.019 6.6E-07 50.3 6.4 60 107-166 225-291 (409)
325 1boo_A Protein (N-4 cytosine-s 95.6 0.017 5.7E-07 49.0 5.8 90 157-248 13-119 (323)
326 1f8f_A Benzyl alcohol dehydrog 95.4 0.0075 2.6E-07 52.1 2.9 92 107-214 189-290 (371)
327 3two_A Mannitol dehydrogenase; 95.4 0.078 2.7E-06 45.2 9.2 91 106-214 174-266 (348)
328 1lss_A TRK system potassium up 95.3 0.52 1.8E-05 33.7 12.4 87 110-211 5-100 (140)
329 2dph_A Formaldehyde dismutase; 95.2 0.059 2E-06 46.9 8.2 100 106-213 183-299 (398)
330 3fpc_A NADP-dependent alcohol 95.2 0.01 3.6E-07 50.8 3.2 94 106-214 164-267 (352)
331 3c85_A Putative glutathione-re 95.2 0.43 1.5E-05 36.3 12.2 107 109-244 39-156 (183)
332 3ius_A Uncharacterized conserv 95.2 0.52 1.8E-05 38.4 13.5 128 110-248 6-151 (286)
333 3m6i_A L-arabinitol 4-dehydrog 95.1 0.09 3.1E-06 45.0 8.8 96 106-214 177-284 (363)
334 1pl8_A Human sorbitol dehydrog 95.0 0.076 2.6E-06 45.4 8.2 93 106-214 169-274 (356)
335 2zwa_A Leucine carboxyl methyl 95.0 1.1 3.9E-05 41.8 16.5 151 97-250 95-310 (695)
336 1id1_A Putative potassium chan 94.9 0.49 1.7E-05 34.8 11.6 92 110-213 4-105 (153)
337 3ip1_A Alcohol dehydrogenase, 94.9 0.031 1.1E-06 48.8 5.5 98 107-214 212-319 (404)
338 1uuf_A YAHK, zinc-type alcohol 94.9 0.04 1.4E-06 47.5 6.1 92 106-213 192-288 (369)
339 1pqw_A Polyketide synthase; ro 94.9 0.022 7.4E-07 44.3 3.9 90 107-214 37-138 (198)
340 2hwk_A Helicase NSP2; rossman 94.8 0.12 4.2E-06 42.3 8.0 82 159-249 190-281 (320)
341 3uog_A Alcohol dehydrogenase; 94.8 0.013 4.5E-07 50.4 2.5 93 107-215 188-289 (363)
342 3s2e_A Zinc-containing alcohol 94.7 0.1 3.5E-06 44.2 8.0 94 106-214 164-264 (340)
343 1zkd_A DUF185; NESG, RPR58, st 94.7 0.25 8.7E-06 42.7 10.3 43 110-152 82-133 (387)
344 4ej6_A Putative zinc-binding d 94.5 0.039 1.3E-06 47.6 5.1 97 106-214 180-285 (370)
345 1kol_A Formaldehyde dehydrogen 94.4 0.21 7E-06 43.4 9.4 100 106-213 183-300 (398)
346 1g60_A Adenine-specific methyl 94.4 0.061 2.1E-06 43.9 5.6 81 159-250 5-100 (260)
347 3l9w_A Glutathione-regulated p 94.2 0.24 8.3E-06 43.4 9.3 90 109-213 4-102 (413)
348 1e3j_A NADP(H)-dependent ketos 94.1 0.15 5.2E-06 43.4 7.8 94 106-214 166-272 (352)
349 2d8a_A PH0655, probable L-thre 94.0 0.035 1.2E-06 47.3 3.6 92 108-214 167-268 (348)
350 3l4b_C TRKA K+ channel protien 93.9 0.44 1.5E-05 37.5 9.6 89 111-213 2-99 (218)
351 3goh_A Alcohol dehydrogenase, 93.9 0.075 2.6E-06 44.6 5.3 87 107-213 141-229 (315)
352 3gms_A Putative NADPH:quinone 93.8 0.018 6.2E-07 49.0 1.4 92 107-214 143-244 (340)
353 3swr_A DNA (cytosine-5)-methyl 93.6 0.41 1.4E-05 46.5 10.5 126 110-246 541-699 (1002)
354 4b7c_A Probable oxidoreductase 93.6 0.28 9.6E-06 41.4 8.5 94 106-214 147-249 (336)
355 3jyn_A Quinone oxidoreductase; 93.6 0.023 7.8E-07 48.0 1.6 92 107-214 139-240 (325)
356 1eg2_A Modification methylase 93.6 0.25 8.5E-06 41.7 8.0 89 158-249 38-140 (319)
357 2h6e_A ADH-4, D-arabinose 1-de 93.5 0.093 3.2E-06 44.6 5.4 92 108-214 170-270 (344)
358 1v3u_A Leukotriene B4 12- hydr 93.5 0.3 1E-05 41.1 8.5 89 107-213 144-244 (333)
359 3qwb_A Probable quinone oxidor 93.4 0.028 9.4E-07 47.7 1.8 92 107-214 147-248 (334)
360 3oig_A Enoyl-[acyl-carrier-pro 93.2 1.3 4.6E-05 35.6 11.7 107 107-214 5-148 (266)
361 3pxx_A Carveol dehydrogenase; 93.0 1.2 4.2E-05 36.2 11.4 105 107-213 8-153 (287)
362 2eih_A Alcohol dehydrogenase; 93.0 0.65 2.2E-05 39.2 9.9 90 107-214 165-266 (343)
363 4fn4_A Short chain dehydrogena 93.0 2.2 7.4E-05 34.6 12.5 74 107-182 5-92 (254)
364 1vj0_A Alcohol dehydrogenase, 92.9 0.27 9.3E-06 42.4 7.5 93 107-214 194-299 (380)
365 4f3n_A Uncharacterized ACR, CO 92.9 0.23 8E-06 43.5 7.0 43 109-151 138-187 (432)
366 4eye_A Probable oxidoreductase 92.9 0.29 9.9E-06 41.5 7.5 92 107-214 158-258 (342)
367 1piw_A Hypothetical zinc-type 92.9 0.17 5.9E-06 43.2 6.1 95 106-214 177-277 (360)
368 2j3h_A NADP-dependent oxidored 92.7 0.54 1.8E-05 39.7 9.0 93 107-214 154-256 (345)
369 3iht_A S-adenosyl-L-methionine 92.6 0.93 3.2E-05 33.7 8.6 98 106-211 38-145 (174)
370 4ft4_B DNA (cytosine-5)-methyl 92.6 1.1 3.8E-05 42.5 11.7 42 110-151 213-261 (784)
371 3grk_A Enoyl-(acyl-carrier-pro 92.5 1.7 5.9E-05 35.7 11.7 105 107-214 29-170 (293)
372 2g1u_A Hypothetical protein TM 92.5 0.58 2E-05 34.5 8.0 93 107-213 17-118 (155)
373 3jv7_A ADH-A; dehydrogenase, n 92.4 0.17 5.8E-06 43.0 5.4 94 106-214 169-271 (345)
374 3uko_A Alcohol dehydrogenase c 92.3 0.063 2.1E-06 46.4 2.5 93 107-214 192-296 (378)
375 4eso_A Putative oxidoreductase 92.3 0.95 3.2E-05 36.5 9.6 102 107-213 6-138 (255)
376 2c0c_A Zinc binding alcohol de 92.2 0.15 5.2E-06 43.7 4.8 93 106-214 161-262 (362)
377 2b5w_A Glucose dehydrogenase; 92.2 0.47 1.6E-05 40.4 8.0 87 110-214 174-274 (357)
378 1cdo_A Alcohol dehydrogenase; 92.2 0.1 3.4E-06 45.0 3.7 93 107-214 191-295 (374)
379 2dq4_A L-threonine 3-dehydroge 92.1 0.029 9.8E-07 47.8 0.2 89 108-213 164-262 (343)
380 1p0f_A NADP-dependent alcohol 92.0 0.1 3.5E-06 44.9 3.6 93 107-214 190-294 (373)
381 2fzw_A Alcohol dehydrogenase c 92.0 0.12 3.9E-06 44.5 3.9 93 107-214 189-293 (373)
382 3av4_A DNA (cytosine-5)-methyl 92.0 1.2 4.1E-05 44.7 11.4 128 109-246 851-1010(1330)
383 1e3i_A Alcohol dehydrogenase, 91.9 0.11 3.8E-06 44.7 3.7 93 107-214 194-298 (376)
384 3v2g_A 3-oxoacyl-[acyl-carrier 91.9 2.3 7.7E-05 34.6 11.5 113 100-214 22-166 (271)
385 2jhf_A Alcohol dehydrogenase E 91.9 0.13 4.6E-06 44.2 4.2 92 107-213 190-293 (374)
386 2j8z_A Quinone oxidoreductase; 91.8 0.07 2.4E-06 45.6 2.3 92 107-214 161-262 (354)
387 1jvb_A NAD(H)-dependent alcoho 91.8 0.5 1.7E-05 40.0 7.6 95 106-214 168-272 (347)
388 1rjw_A ADH-HT, alcohol dehydro 91.7 0.16 5.6E-06 43.0 4.4 91 106-213 162-261 (339)
389 3ek2_A Enoyl-(acyl-carrier-pro 91.6 1.2 4E-05 36.0 9.4 106 106-214 11-154 (271)
390 4dup_A Quinone oxidoreductase; 91.5 0.062 2.1E-06 46.0 1.6 91 107-214 166-266 (353)
391 2hcy_A Alcohol dehydrogenase 1 91.5 0.72 2.5E-05 39.1 8.3 91 106-214 167-270 (347)
392 3ijr_A Oxidoreductase, short c 91.5 2.4 8.4E-05 34.7 11.4 105 107-213 45-182 (291)
393 1yb5_A Quinone oxidoreductase; 91.5 0.79 2.7E-05 39.0 8.6 89 107-213 169-269 (351)
394 3nx4_A Putative oxidoreductase 91.4 0.22 7.4E-06 41.8 4.9 89 111-214 149-242 (324)
395 1iz0_A Quinone oxidoreductase; 91.3 0.094 3.2E-06 43.7 2.5 89 106-213 123-218 (302)
396 1qor_A Quinone oxidoreductase; 91.2 0.069 2.4E-06 45.0 1.6 90 107-214 139-240 (327)
397 4dkj_A Cytosine-specific methy 91.1 0.53 1.8E-05 41.0 7.0 43 110-152 11-60 (403)
398 4g81_D Putative hexonate dehyd 91.0 1.1 3.7E-05 36.4 8.5 61 106-168 6-69 (255)
399 1wly_A CAAR, 2-haloacrylate re 90.9 0.1 3.5E-06 44.1 2.3 90 107-214 144-245 (333)
400 4dvj_A Putative zinc-dependent 90.8 0.77 2.6E-05 39.2 7.9 90 108-212 171-269 (363)
401 3ggo_A Prephenate dehydrogenas 90.7 1.3 4.5E-05 37.0 9.0 88 110-211 34-126 (314)
402 2aef_A Calcium-gated potassium 90.5 1.6 5.5E-05 34.5 9.1 89 109-214 9-106 (234)
403 2hmt_A YUAA protein; RCK, KTN, 90.5 1.8 6.1E-05 30.9 8.7 106 109-243 6-120 (144)
404 3is3_A 17BETA-hydroxysteroid d 90.5 3 0.0001 33.7 10.9 106 107-214 16-153 (270)
405 1lnq_A MTHK channels, potassiu 90.4 1.9 6.4E-05 36.3 9.8 89 109-214 115-212 (336)
406 3h7a_A Short chain dehydrogena 90.3 5.1 0.00017 32.0 12.0 60 107-168 5-67 (252)
407 3e8x_A Putative NAD-dependent 90.2 2.8 9.7E-05 32.9 10.3 131 107-248 19-170 (236)
408 1yqd_A Sinapyl alcohol dehydro 90.2 0.9 3.1E-05 38.8 7.8 91 108-214 187-283 (366)
409 3qiv_A Short-chain dehydrogena 90.2 1.9 6.4E-05 34.4 9.3 76 107-184 7-96 (253)
410 4eez_A Alcohol dehydrogenase 1 90.1 0.58 2E-05 39.6 6.4 97 106-214 161-264 (348)
411 2zb4_A Prostaglandin reductase 90.0 1.5 5.1E-05 37.2 9.0 92 106-214 156-261 (357)
412 3fbg_A Putative arginate lyase 89.9 0.15 5.1E-06 43.4 2.5 90 108-212 150-247 (346)
413 3k31_A Enoyl-(acyl-carrier-pro 89.9 2.5 8.5E-05 34.8 10.0 105 107-214 28-169 (296)
414 4fgs_A Probable dehydrogenase 89.8 7.2 0.00025 31.8 13.3 57 107-168 27-86 (273)
415 3lyl_A 3-oxoacyl-(acyl-carrier 89.5 3.4 0.00012 32.7 10.3 75 108-184 4-92 (247)
416 1xa0_A Putative NADPH dependen 89.5 0.35 1.2E-05 40.6 4.5 94 108-214 148-247 (328)
417 3ioy_A Short-chain dehydrogena 89.3 8.4 0.00029 32.0 13.1 62 107-168 6-70 (319)
418 1wma_A Carbonyl reductase [NAD 89.3 1.9 6.4E-05 34.6 8.7 102 109-213 4-138 (276)
419 4hp8_A 2-deoxy-D-gluconate 3-d 89.3 3.1 0.00011 33.5 9.8 74 106-183 6-88 (247)
420 2cf5_A Atccad5, CAD, cinnamyl 89.3 0.67 2.3E-05 39.5 6.2 92 108-214 180-276 (357)
421 3r3s_A Oxidoreductase; structu 89.2 3 0.0001 34.3 10.0 106 107-214 47-186 (294)
422 2cdc_A Glucose dehydrogenase g 89.2 0.84 2.9E-05 39.0 6.8 89 109-213 181-278 (366)
423 1xg5_A ARPG836; short chain de 89.2 2.8 9.7E-05 34.0 9.8 76 108-184 31-121 (279)
424 3gaz_A Alcohol dehydrogenase s 89.1 0.15 5.1E-06 43.4 1.9 88 107-213 149-246 (343)
425 3krt_A Crotonyl COA reductase; 89.1 2.2 7.6E-05 37.6 9.6 94 107-213 227-344 (456)
426 2f1k_A Prephenate dehydrogenas 88.8 3.1 0.00011 33.7 9.7 86 111-211 2-89 (279)
427 4fs3_A Enoyl-[acyl-carrier-pro 88.7 5.1 0.00017 32.1 10.9 108 106-214 3-147 (256)
428 1qsg_A Enoyl-[acyl-carrier-pro 88.6 6.2 0.00021 31.6 11.4 104 108-214 8-149 (265)
429 4a2c_A Galactitol-1-phosphate 88.4 10 0.00035 31.7 15.3 94 106-214 158-261 (346)
430 3imf_A Short chain dehydrogena 87.9 8.4 0.00029 30.7 11.7 59 108-168 5-66 (257)
431 3abi_A Putative uncharacterize 87.7 1.7 5.9E-05 37.1 7.7 65 107-182 14-85 (365)
432 2ae2_A Protein (tropinone redu 87.6 3.6 0.00012 32.9 9.3 75 107-184 7-97 (260)
433 4e6p_A Probable sorbitol dehyd 87.5 6.5 0.00022 31.4 10.8 73 107-184 6-92 (259)
434 2gdz_A NAD+-dependent 15-hydro 86.9 7 0.00024 31.3 10.8 76 108-184 6-96 (267)
435 3sju_A Keto reductase; short-c 86.8 10 0.00034 30.7 11.7 58 109-168 24-84 (279)
436 1hdc_A 3-alpha, 20 beta-hydrox 86.8 3.7 0.00012 32.8 8.9 72 108-184 4-89 (254)
437 3t4x_A Oxidoreductase, short c 86.7 3.6 0.00012 33.1 8.9 78 107-184 8-95 (267)
438 1g0o_A Trihydroxynaphthalene r 86.7 6.4 0.00022 31.9 10.5 104 107-213 27-163 (283)
439 3r6d_A NAD-dependent epimerase 86.6 3.2 0.00011 32.2 8.3 126 111-248 7-154 (221)
440 3ucx_A Short chain dehydrogena 86.5 11 0.00038 30.1 13.3 60 107-168 9-71 (264)
441 3lf2_A Short chain oxidoreduct 86.3 11 0.00038 30.1 11.7 63 106-168 5-70 (265)
442 1tt7_A YHFP; alcohol dehydroge 86.2 1.7 5.9E-05 36.3 6.8 91 108-214 149-248 (330)
443 4ibo_A Gluconate dehydrogenase 85.9 2.7 9.3E-05 34.1 7.7 77 106-184 23-113 (271)
444 3tfo_A Putative 3-oxoacyl-(acy 85.9 11 0.00039 30.2 11.4 58 109-168 4-64 (264)
445 4dcm_A Ribosomal RNA large sub 85.5 13 0.00045 31.7 12.2 99 108-214 38-137 (375)
446 3ged_A Short-chain dehydrogena 85.4 8.9 0.0003 30.7 10.4 67 110-182 3-83 (247)
447 3r1i_A Short-chain type dehydr 85.3 8.4 0.00029 31.2 10.4 61 106-168 29-92 (276)
448 2ew2_A 2-dehydropantoate 2-red 85.0 14 0.00049 30.0 12.1 98 110-212 4-107 (316)
449 2g5c_A Prephenate dehydrogenas 84.6 6.6 0.00022 31.8 9.5 87 111-211 3-94 (281)
450 4e12_A Diketoreductase; oxidor 84.6 3.6 0.00012 33.7 7.9 96 110-211 5-119 (283)
451 4a0s_A Octenoyl-COA reductase/ 84.4 4.4 0.00015 35.5 8.8 93 107-213 219-336 (447)
452 4imr_A 3-oxoacyl-(acyl-carrier 84.4 7.6 0.00026 31.4 9.8 61 106-168 30-93 (275)
453 1xkq_A Short-chain reductase f 84.3 5.8 0.0002 32.1 9.0 75 108-183 5-95 (280)
454 3k96_A Glycerol-3-phosphate de 84.1 6.9 0.00024 33.3 9.7 96 110-213 30-133 (356)
455 3gqv_A Enoyl reductase; medium 84.1 4.5 0.00016 34.4 8.6 91 107-213 163-263 (371)
456 3v8b_A Putative dehydrogenase, 84.0 16 0.00053 29.7 13.2 60 107-168 26-88 (283)
457 1zcj_A Peroxisomal bifunctiona 83.7 14 0.00047 32.6 11.8 95 110-211 38-148 (463)
458 1geg_A Acetoin reductase; SDR 83.6 8.7 0.0003 30.5 9.7 71 110-183 3-88 (256)
459 3f9i_A 3-oxoacyl-[acyl-carrier 83.5 4.9 0.00017 31.8 8.1 74 106-184 11-94 (249)
460 3ic5_A Putative saccharopine d 83.3 3.7 0.00013 28.0 6.5 64 109-182 5-77 (118)
461 1xhl_A Short-chain dehydrogena 83.3 4.4 0.00015 33.3 8.0 76 107-183 24-115 (297)
462 3pgx_A Carveol dehydrogenase; 83.2 16 0.00056 29.3 12.1 60 107-168 13-88 (280)
463 3tjr_A Short chain dehydrogena 83.2 4.4 0.00015 33.4 7.9 76 107-184 29-118 (301)
464 1cyd_A Carbonyl reductase; sho 83.2 15 0.0005 28.7 11.1 70 107-183 5-85 (244)
465 3tqh_A Quinone oxidoreductase; 83.1 4.1 0.00014 33.8 7.8 90 106-212 150-244 (321)
466 3hwr_A 2-dehydropantoate 2-red 82.9 7 0.00024 32.5 9.1 98 107-214 17-121 (318)
467 3nrc_A Enoyl-[acyl-carrier-pro 82.6 16 0.00055 29.4 11.1 74 107-184 24-113 (280)
468 2vn8_A Reticulon-4-interacting 82.6 4.1 0.00014 34.7 7.7 92 107-213 182-280 (375)
469 2cfc_A 2-(R)-hydroxypropyl-COM 82.6 5.8 0.0002 31.2 8.2 71 110-183 3-89 (250)
470 3tox_A Short chain dehydrogena 82.5 16 0.00054 29.6 11.0 60 107-168 6-68 (280)
471 2p91_A Enoyl-[acyl-carrier-pro 82.1 13 0.00046 29.9 10.5 75 107-184 19-109 (285)
472 3t7c_A Carveol dehydrogenase; 82.0 19 0.00066 29.3 13.4 60 107-168 26-100 (299)
473 3oec_A Carveol dehydrogenase ( 81.9 20 0.0007 29.5 11.8 60 107-168 44-118 (317)
474 3g0o_A 3-hydroxyisobutyrate de 81.9 5.4 0.00019 32.9 8.0 112 110-245 8-125 (303)
475 2pd4_A Enoyl-[acyl-carrier-pro 81.9 12 0.00042 30.0 10.1 104 108-214 5-145 (275)
476 3ftp_A 3-oxoacyl-[acyl-carrier 81.8 16 0.00053 29.4 10.7 60 107-168 26-88 (270)
477 3o38_A Short chain dehydrogena 81.6 18 0.00062 28.7 12.4 61 107-168 20-84 (266)
478 3rd5_A Mypaa.01249.C; ssgcid, 81.3 6.5 0.00022 32.0 8.2 73 107-184 14-96 (291)
479 3c24_A Putative oxidoreductase 81.3 12 0.0004 30.4 9.8 85 110-211 12-99 (286)
480 3tsc_A Putative oxidoreductase 81.2 19 0.00067 28.8 12.1 60 107-168 9-84 (277)
481 2cvz_A Dehydrogenase, 3-hydrox 81.2 8 0.00027 31.3 8.8 109 111-245 3-113 (289)
482 2dpo_A L-gulonate 3-dehydrogen 81.1 12 0.00042 31.1 10.0 96 110-211 7-121 (319)
483 3gaf_A 7-alpha-hydroxysteroid 81.1 4.2 0.00014 32.5 6.9 77 106-184 9-99 (256)
484 3d1l_A Putative NADP oxidoredu 81.1 11 0.00036 30.2 9.4 89 109-212 10-101 (266)
485 3rkr_A Short chain oxidoreduct 81.1 5 0.00017 32.1 7.4 75 107-184 27-116 (262)
486 3h2s_A Putative NADH-flavin re 81.0 8.6 0.00029 29.6 8.6 93 111-212 2-103 (224)
487 4g65_A TRK system potassium up 80.6 5 0.00017 35.5 7.7 90 109-212 3-101 (461)
488 2wyu_A Enoyl-[acyl carrier pro 80.3 5.9 0.0002 31.7 7.5 75 107-184 6-96 (261)
489 3guy_A Short-chain dehydrogena 80.2 12 0.00042 29.0 9.3 68 111-184 3-82 (230)
490 1ej6_A Lambda2; icosahedral, n 80.2 2.7 9.3E-05 40.7 5.9 96 106-208 819-919 (1289)
491 3rih_A Short chain dehydrogena 79.9 21 0.00073 29.1 11.0 61 107-168 39-102 (293)
492 3dqp_A Oxidoreductase YLBE; al 79.8 15 0.00052 28.1 9.6 125 111-248 2-150 (219)
493 3oj0_A Glutr, glutamyl-tRNA re 79.4 7.8 0.00027 27.8 7.3 107 109-237 21-132 (144)
494 3svt_A Short-chain type dehydr 79.4 23 0.00078 28.5 13.2 62 107-168 9-74 (281)
495 3rku_A Oxidoreductase YMR226C; 79.3 10 0.00035 30.9 8.8 77 108-184 32-125 (287)
496 2nwq_A Probable short-chain de 78.8 21 0.00071 28.7 10.5 72 110-184 22-107 (272)
497 3ew7_A LMO0794 protein; Q8Y8U8 78.7 18 0.00062 27.5 9.8 92 111-212 2-101 (221)
498 3pk0_A Short-chain dehydrogena 78.6 23 0.00079 28.1 12.0 61 107-168 8-71 (262)
499 3awd_A GOX2181, putative polyo 78.6 8.4 0.00029 30.5 8.0 74 107-183 11-99 (260)
500 1yb1_A 17-beta-hydroxysteroid 78.4 8.4 0.00029 31.0 8.0 75 107-184 29-118 (272)
No 1
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.95 E-value=1.2e-27 Score=197.09 Aligned_cols=193 Identities=68% Similarity=1.261 Sum_probs=172.9
Q ss_pred ccchhHhhhcCCCCccCCCccHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCC
Q 024021 75 SGGWEKCWEEGLTPWDIGQPAPIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLP 154 (274)
Q Consensus 75 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~ 154 (274)
..+|++.|.....+|......+.+..++.....++.+|||+|||+|..+..+++.+.+|+|+|+++.+++.|+++....+
T Consensus 33 ~~~w~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~ 112 (235)
T 3lcc_A 33 EGGWEKCWEEEITPWDQGRATPLIVHLVDTSSLPLGRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSSP 112 (235)
T ss_dssp HHHHHHHHHTTCCTTCCSSCCHHHHHHHHTTCSCCEEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTSG
T ss_pred HHHHHHHHhcCCCCcccCCCCHHHHHHHHhcCCCCCCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhccC
Confidence 47899999998889988888888899888776667799999999999999999999999999999999999999987755
Q ss_pred CCcceEEEEcccCCCCCCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHH
Q 024021 155 NAKFVSFLKADFFTWCPTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEE 234 (274)
Q Consensus 155 ~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (274)
...+++++.+|+.+..+.++||+|++..++++++++....+++.+.++|+|||.+++..+.......++++.++.+++.+
T Consensus 113 ~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (235)
T 3lcc_A 113 KAEYFSFVKEDVFTWRPTELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEE 192 (235)
T ss_dssp GGGGEEEECCCTTTCCCSSCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHH
T ss_pred CCcceEEEECchhcCCCCCCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHH
Confidence 55679999999999777779999999999999987788899999999999999999999988777778888899999999
Q ss_pred HHhcCCCcEEEEeecccccCCccchhHHHHhhh
Q 024021 235 VLQPMGFQAISIVDNKLAIGPRKGREKLGRWKR 267 (274)
Q Consensus 235 ~l~~~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (274)
+++.+||+++.+...........+.|.+.+++.
T Consensus 193 ~l~~~Gf~~~~~~~~~~~~~~~~g~e~~~~~~~ 225 (235)
T 3lcc_A 193 VLVPIGFKAVSVEENPHAIPTRKGKEKLGRWKK 225 (235)
T ss_dssp HHGGGTEEEEEEEECTTCCTTTTTSCEEEEEEE
T ss_pred HHHHcCCeEEEEEecCCccccccCHHHHhhhhh
Confidence 999999999999999999888888877765543
No 2
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.92 E-value=6.3e-24 Score=176.50 Aligned_cols=175 Identities=18% Similarity=0.303 Sum_probs=141.9
Q ss_pred ccchhHhhhcCCCCccCCCccHHHHHHHhcC--CCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhc
Q 024021 75 SGGWEKCWEEGLTPWDIGQPAPIIVHLHQSG--ALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSS 152 (274)
Q Consensus 75 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~ 152 (274)
..+|+..|..+..+|....+.+.+..++... ..++.+|||+|||+|..+..|++.|++|+|+|+|+.+++.|+++...
T Consensus 33 ~~~Wd~~y~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~ 112 (252)
T 2gb4_A 33 LEDWKEKWVTRHISFHQEQGHQLLKKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNL 112 (252)
T ss_dssp HHHHHHHHHHTCCTTCCTTCCHHHHHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCCCcccCCCCHHHHHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhccc
Confidence 4689999998888898888888887777542 23568999999999999999999999999999999999999877531
Q ss_pred ----------C------CCCcceEEEEcccCCCCCC--CCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 153 ----------L------PNAKFVSFLKADFFTWCPT--ELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 153 ----------~------~~~~~~~~~~~d~~~~~~~--~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
. ....+++++++|+.+..+. ++||+|++..++++++++....+++++.++|+|||++++.++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~ 192 (252)
T 2gb4_A 113 SYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVL 192 (252)
T ss_dssp CEEEEECTTSTTCEEEEETTSSEEEEESCTTTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ccccccccccccccccccCCCceEEEECccccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEE
Confidence 0 0125799999999985443 789999999999999887788999999999999999875443
Q ss_pred cC-CCCCCCCCcccCHHHHHHHHhcCCCcEEEEeecc
Q 024021 215 PI-SDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDNK 250 (274)
Q Consensus 215 ~~-~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 250 (274)
.. .....++++.++.+++.++++. +|+++......
T Consensus 193 ~~~~~~~~g~~~~~~~~el~~~l~~-~f~v~~~~~~~ 228 (252)
T 2gb4_A 193 SYDPTKHAGPPFYVPSAELKRLFGT-KCSMQCLEEVD 228 (252)
T ss_dssp ECCTTSCCCSSCCCCHHHHHHHHTT-TEEEEEEEEEE
T ss_pred ecCCccCCCCCCCCCHHHHHHHhhC-CeEEEEEeccc
Confidence 22 2223467777899999999998 59998877543
No 3
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.91 E-value=8.1e-24 Score=170.47 Aligned_cols=163 Identities=18% Similarity=0.295 Sum_probs=131.2
Q ss_pred CccCCCccHHHHHHHhcCCC-CCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCC-----------C
Q 024021 88 PWDIGQPAPIIVHLHQSGAL-PKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLP-----------N 155 (274)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~-~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~-----------~ 155 (274)
+|+...+.+.+.+++..... ++.+|||+|||+|..+..+++.|.+|+|+|+|+.+++.|+++..... .
T Consensus 1 ~w~~~~~~~~l~~~~~~l~~~~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~ 80 (203)
T 1pjz_A 1 GSHQSEVNKDLQQYWSSLNVVPGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYA 80 (203)
T ss_dssp --CCSSSTHHHHHHHHHHCCCTTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEE
T ss_pred CCCcccCCHHHHHHHHhcccCCCCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCccccccccccccc
Confidence 58888889999888876543 56899999999999999999989999999999999999998864310 1
Q ss_pred CcceEEEEcccCCCCCC--CCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccC-CCCCCCCCcccCHHHH
Q 024021 156 AKFVSFLKADFFTWCPT--ELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPI-SDHVGGPPYKVSVSDY 232 (274)
Q Consensus 156 ~~~~~~~~~d~~~~~~~--~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~-~~~~~~~~~~~~~~~~ 232 (274)
..+++++++|+.+.... ++||+|++..++++++++....+++++.++|+|||++++..... .....++++.++.+++
T Consensus 81 ~~~v~~~~~d~~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el 160 (203)
T 1pjz_A 81 APGIEIWCGDFFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWL 160 (203)
T ss_dssp CSSSEEEEECCSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHH
T ss_pred CCccEEEECccccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHH
Confidence 25799999999985543 68999999999999988778889999999999999844433322 1223466777899999
Q ss_pred HHHHhcCCCcEEEEeeccc
Q 024021 233 EEVLQPMGFQAISIVDNKL 251 (274)
Q Consensus 233 ~~~l~~~Gf~~~~~~~~~~ 251 (274)
.++++. ||+++.+.....
T Consensus 161 ~~~~~~-gf~i~~~~~~~~ 178 (203)
T 1pjz_A 161 HRVMSG-NWEVTKVGGQDT 178 (203)
T ss_dssp HHTSCS-SEEEEEEEESSC
T ss_pred HHHhcC-CcEEEEeccccc
Confidence 999999 999988877554
No 4
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.88 E-value=4.5e-22 Score=166.15 Aligned_cols=152 Identities=18% Similarity=0.169 Sum_probs=122.7
Q ss_pred HHHHHhcCCCCCCeEEEEcCCcchhHHHhhC----CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCC
Q 024021 98 IVHLHQSGALPKGRALVPGCGTGYDVVAMAS----PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTE 173 (274)
Q Consensus 98 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~----~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 173 (274)
+..++.....++.+|||+|||+|..+..+++ ++++|+|+|+|+.|++.|++++...+...+++++++|+.+... +
T Consensus 60 i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~-~ 138 (261)
T 4gek_A 60 IGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAI-E 138 (261)
T ss_dssp HHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCC-C
T ss_pred HHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccc-c
Confidence 3344444456778999999999999988875 4779999999999999999999887777789999999987543 5
Q ss_pred CeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC----------------CCC---------------
Q 024021 174 LFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH----------------VGG--------------- 222 (274)
Q Consensus 174 ~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~----------------~~~--------------- 222 (274)
+||+|+++.++++++++.+..++++++++|+|||.+++.+...... ..|
T Consensus 139 ~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~~~~~~~~~~~~~~~~g~s~~ei~~~~~~l~~ 218 (261)
T 4gek_A 139 NASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSMLEN 218 (261)
T ss_dssp SEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHHHHHHHHHHHHHHHHTTGGGSTTHHHHHHHHH
T ss_pred ccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhcc
Confidence 6999999999999998888899999999999999999977544321 000
Q ss_pred CCcccCHHHHHHHHhcCCCcEEEEeecc
Q 024021 223 PPYKVSVSDYEEVLQPMGFQAISIVDNK 250 (274)
Q Consensus 223 ~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 250 (274)
.....+.+++.++|+++||+.+++....
T Consensus 219 ~~~~~s~~~~~~~L~~AGF~~ve~~fq~ 246 (261)
T 4gek_A 219 VMLTDSVETHKARLHKAGFEHSELWFQC 246 (261)
T ss_dssp HCCCBCHHHHHHHHHHHTCSEEEEEEEE
T ss_pred cccCCCHHHHHHHHHHcCCCeEEEEEEe
Confidence 0123478899999999999998876543
No 5
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.87 E-value=1.9e-21 Score=156.11 Aligned_cols=186 Identities=15% Similarity=0.223 Sum_probs=141.8
Q ss_pred chhHhhhcCCCCccCCCccHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCC
Q 024021 77 GWEKCWEEGLTPWDIGQPAPIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNA 156 (274)
Q Consensus 77 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~ 156 (274)
+|++.|......|. ..+...+..++.... ++ +|||+|||+|..+..+++.+.+++++|+++.+++.|+++....+.
T Consensus 1 ~W~~~y~~~~~~~~-~~~~~~l~~~~~~~~-~~-~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~- 76 (202)
T 2kw5_A 1 MWDERFSQSEYVYG-TEPNDFLVSVANQIP-QG-KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLAQEKGV- 76 (202)
T ss_dssp CCCCCCCCCCCCCC-CCCCSSHHHHHHHSC-SS-EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHTC-
T ss_pred Chhhhhcccchhhc-cCchHHHHHHHHhCC-CC-CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCC-
Confidence 57777776555554 345556666666433 34 999999999999999999889999999999999999999866543
Q ss_pred cceEEEEcccCCC-CCCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCC---CC---CCcccCH
Q 024021 157 KFVSFLKADFFTW-CPTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHV---GG---PPYKVSV 229 (274)
Q Consensus 157 ~~~~~~~~d~~~~-~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~---~~---~~~~~~~ 229 (274)
++.++.+|+.+. .+.++||+|++. +.+++.+....+++.+.++|+|||.+++..+...... .+ ..+.++.
T Consensus 77 -~~~~~~~d~~~~~~~~~~fD~v~~~--~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (202)
T 2kw5_A 77 -KITTVQSNLADFDIVADAWEGIVSI--FCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKL 153 (202)
T ss_dssp -CEEEECCBTTTBSCCTTTCSEEEEE--CCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCH
T ss_pred -ceEEEEcChhhcCCCcCCccEEEEE--hhcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCH
Confidence 699999999884 355789999985 3455667788999999999999999999887654331 11 1345799
Q ss_pred HHHHHHHhcCCCcEEEEeecccccCCccchhHHHHhhhhhcc
Q 024021 230 SDYEEVLQPMGFQAISIVDNKLAIGPRKGREKLGRWKRSVRH 271 (274)
Q Consensus 230 ~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (274)
+++.++++ ||+++.+.....+.........+..|.+..+.
T Consensus 154 ~~l~~~l~--Gf~v~~~~~~~~~~~~g~~~~~~~~~i~~~~~ 193 (202)
T 2kw5_A 154 ETLQSELP--SLNWLIANNLERNLDEGAYHQGKAALIQLLGQ 193 (202)
T ss_dssp HHHHHHCS--SSCEEEEEEEEEECSCSSSSCCEEEEEEEEEC
T ss_pred HHHHHHhc--CceEEEEEEEEeecCCCCCcccHHHHHHHHHH
Confidence 99999999 99999998877765443334455666665544
No 6
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.86 E-value=1.3e-20 Score=151.36 Aligned_cols=148 Identities=17% Similarity=0.162 Sum_probs=122.8
Q ss_pred cHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCCC
Q 024021 95 APIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPTE 173 (274)
Q Consensus 95 ~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~ 173 (274)
...+..++... +.+|||+|||+|.++..+++.+.+++|+|+++.+++.++++. .+++++.+|+.+ ..+.+
T Consensus 31 ~~~l~~~~~~~---~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~ 101 (203)
T 3h2b_A 31 RVLIEPWATGV---DGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELARQTH------PSVTFHHGTITDLSDSPK 101 (203)
T ss_dssp HHHHHHHHHHC---CSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHHHHC------TTSEEECCCGGGGGGSCC
T ss_pred HHHHHHHhccC---CCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC------CCCeEEeCcccccccCCC
Confidence 44555655532 789999999999999999998889999999999999999884 468999999988 34568
Q ss_pred CeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC-----CCCCCcccCHHHHHHHHhcCCCcEEEEee
Q 024021 174 LFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH-----VGGPPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 174 ~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 248 (274)
+||+|++..++++++.+....+++++.++|+|||.+++..+..... .......++.+++.++++++||+++.+..
T Consensus 102 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 181 (203)
T 3h2b_A 102 RWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHW 181 (203)
T ss_dssp CEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEE
T ss_pred CeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEe
Confidence 8999999999999986677899999999999999999988655431 11122346899999999999999999987
Q ss_pred ccc
Q 024021 249 NKL 251 (274)
Q Consensus 249 ~~~ 251 (274)
...
T Consensus 182 ~~~ 184 (203)
T 3h2b_A 182 DPR 184 (203)
T ss_dssp CTT
T ss_pred cCC
Confidence 654
No 7
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.84 E-value=5.4e-20 Score=155.53 Aligned_cols=152 Identities=17% Similarity=0.196 Sum_probs=124.5
Q ss_pred HHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC--CCCCe
Q 024021 98 IVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC--PTELF 175 (274)
Q Consensus 98 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~ 175 (274)
+..++.....++.+|||+|||+|.++..+++.+.+|+|+|+++.+++.|+++....+..++++++.+|+.+.. ++++|
T Consensus 58 l~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~f 137 (285)
T 4htf_A 58 LDRVLAEMGPQKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPV 137 (285)
T ss_dssp HHHHHHHTCSSCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCE
T ss_pred HHHHHHhcCCCCCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCc
Confidence 4455555555568999999999999999998899999999999999999999988877678999999998843 67899
Q ss_pred eEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCC-----------------------CCCCCCcccCHHHH
Q 024021 176 DLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISD-----------------------HVGGPPYKVSVSDY 232 (274)
Q Consensus 176 D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~ 232 (274)
|+|++..+++++++. ..+++++.++|+|||.+++..+.... ........++.+++
T Consensus 138 D~v~~~~~l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 215 (285)
T 4htf_A 138 DLILFHAVLEWVADP--RSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQV 215 (285)
T ss_dssp EEEEEESCGGGCSCH--HHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHH
T ss_pred eEEEECchhhcccCH--HHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHH
Confidence 999999999999643 67999999999999999997753211 01122344689999
Q ss_pred HHHHhcCCCcEEEEeeccc
Q 024021 233 EEVLQPMGFQAISIVDNKL 251 (274)
Q Consensus 233 ~~~l~~~Gf~~~~~~~~~~ 251 (274)
.++++++||+++.+.....
T Consensus 216 ~~~l~~aGf~v~~~~~~~~ 234 (285)
T 4htf_A 216 YLWLEEAGWQIMGKTGVRV 234 (285)
T ss_dssp HHHHHHTTCEEEEEEEESS
T ss_pred HHHHHHCCCceeeeeeEEE
Confidence 9999999999998877544
No 8
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.84 E-value=7.8e-20 Score=150.00 Aligned_cols=146 Identities=16% Similarity=0.179 Sum_probs=120.9
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFF 184 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~ 184 (274)
.++.+|||+|||+|..+..+++. +.+++++|+++.+++.|+++....+ +++++.+|+.+....++||+|++..++
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~~~~fD~v~~~~~l 119 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL---KVKYIEADYSKYDFEEKYDMVVSALSI 119 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT---TEEEEESCTTTCCCCSCEEEEEEESCG
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC---CEEEEeCchhccCCCCCceEEEEeCcc
Confidence 45689999999999999999884 7899999999999999999987653 799999999986555899999999999
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC------------------------------CCCCCcccCHHHHHH
Q 024021 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH------------------------------VGGPPYKVSVSDYEE 234 (274)
Q Consensus 185 ~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~ 234 (274)
++++++....+++++.++|+|||.+++.+...... ..+....++.+++.+
T Consensus 120 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (234)
T 3dtn_A 120 HHLEDEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQLN 199 (234)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHHH
Confidence 99987777789999999999999999987543221 012223457899999
Q ss_pred HHhcCCCcEEEEeecccccCC
Q 024021 235 VLQPMGFQAISIVDNKLAIGP 255 (274)
Q Consensus 235 ~l~~~Gf~~~~~~~~~~~~~~ 255 (274)
+++++||+.+++......+..
T Consensus 200 ll~~aGF~~v~~~~~~~~~~~ 220 (234)
T 3dtn_A 200 WLKEAGFRDVSCIYKYYQFAV 220 (234)
T ss_dssp HHHHTTCEEEEEEEEETTEEE
T ss_pred HHHHcCCCceeeeeeecceeE
Confidence 999999999998776655543
No 9
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.84 E-value=1.3e-19 Score=154.58 Aligned_cols=165 Identities=15% Similarity=0.162 Sum_probs=131.3
Q ss_pred HHHHHhcCC-CCCCeEEEEcCCcchhHHHhhCC-CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCe
Q 024021 98 IVHLHQSGA-LPKGRALVPGCGTGYDVVAMASP-ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELF 175 (274)
Q Consensus 98 ~~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 175 (274)
+..++.... .++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.|+++....++.++++++.+|+.+. +++|
T Consensus 61 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~f 138 (302)
T 3hem_A 61 RKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF--DEPV 138 (302)
T ss_dssp HHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC--CCCC
T ss_pred HHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc--CCCc
Confidence 344555443 35579999999999999999885 7899999999999999999998887777899999999876 6889
Q ss_pred eEEEecccccccC-------hhHHHHHHHHHHhcccCCcEEEEEEccCCCCC-----C-------------------CCC
Q 024021 176 DLIFDYTFFCAIE-------PEMRAAWAQKIKDFLKPDGELITLMFPISDHV-----G-------------------GPP 224 (274)
Q Consensus 176 D~v~~~~~~~~~~-------~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~-----~-------------------~~~ 224 (274)
|+|++..++++++ .+....+++++.++|+|||++++..+...... . ...
T Consensus 139 D~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 218 (302)
T 3hem_A 139 DRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGG 218 (302)
T ss_dssp SEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTC
T ss_pred cEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCCC
Confidence 9999999999993 35678899999999999999999887554221 0 001
Q ss_pred cccCHHHHHHHHhcCCCcEEEEeecccccCCccchhHHHHhhhhh
Q 024021 225 YKVSVSDYEEVLQPMGFQAISIVDNKLAIGPRKGREKLGRWKRSV 269 (274)
Q Consensus 225 ~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (274)
...+.+++.++++++||+++.+......+ ..++..|.+.+
T Consensus 219 ~~~s~~~~~~~l~~aGf~~~~~~~~~~~y-----~~tl~~w~~~~ 258 (302)
T 3hem_A 219 RLPRISQVDYYSSNAGWKVERYHRIGANY-----VPTLNAWADAL 258 (302)
T ss_dssp CCCCHHHHHHHHHHHTCEEEEEEECGGGH-----HHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHhCCcEEEEEEeCchhH-----HHHHHHHHHHH
Confidence 33578999999999999999987755433 35566665543
No 10
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.84 E-value=2.9e-20 Score=158.33 Aligned_cols=159 Identities=13% Similarity=0.131 Sum_probs=126.9
Q ss_pred cHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCC--cceEEEEcccCCCCCC
Q 024021 95 APIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNA--KFVSFLKADFFTWCPT 172 (274)
Q Consensus 95 ~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~--~~~~~~~~d~~~~~~~ 172 (274)
......++.....++.+|||+|||+|.++..+++.+.+|+++|+++.+++.|+++....+.. .+++++.+|+.+....
T Consensus 69 ~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 148 (299)
T 3g2m_A 69 TSEAREFATRTGPVSGPVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFALD 148 (299)
T ss_dssp HHHHHHHHHHHCCCCSCEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCCS
T ss_pred cHHHHHHHHhhCCCCCcEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCcC
Confidence 44455555554555569999999999999999999999999999999999999998765421 4699999999986667
Q ss_pred CCeeEEEec-ccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCC-------------------------------
Q 024021 173 ELFDLIFDY-TFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHV------------------------------- 220 (274)
Q Consensus 173 ~~~D~v~~~-~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~------------------------------- 220 (274)
++||+|++. .++++++++....+++++.++|+|||.+++..+......
T Consensus 149 ~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 228 (299)
T 3g2m_A 149 KRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVRHLPAEEIQ 228 (299)
T ss_dssp CCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHHSCCCCC-------------CCEEEEEEEEEE
T ss_pred CCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCccccccchhccceeecCCCcEEEEEEEEeccccEE
Confidence 899998865 677888877788999999999999999999776543110
Q ss_pred ----------CCC-------CcccCHHHHHHHHhcCCCcEEEEeeccccc
Q 024021 221 ----------GGP-------PYKVSVSDYEEVLQPMGFQAISIVDNKLAI 253 (274)
Q Consensus 221 ----------~~~-------~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~ 253 (274)
.+. ...++.+++.++++++||+++.+.....+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~g 278 (299)
T 3g2m_A 229 EITIHPADETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFASGG 278 (299)
T ss_dssp EEEEEESCC--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEECTTS
T ss_pred EEEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecCCCC
Confidence 000 012589999999999999999998876544
No 11
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.84 E-value=4.2e-20 Score=149.28 Aligned_cols=149 Identities=14% Similarity=0.077 Sum_probs=123.3
Q ss_pred cHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCC
Q 024021 95 APIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTEL 174 (274)
Q Consensus 95 ~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 174 (274)
...+..++... .++.+|||+|||+|.++..+++.+.+|+++|+++.+++.++++. ++.+..+|+....+.++
T Consensus 31 ~~~~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~d~~~~~~~~~ 102 (211)
T 3e23_A 31 SATLTKFLGEL-PAGAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRL-------GRPVRTMLFHQLDAIDA 102 (211)
T ss_dssp CHHHHHHHTTS-CTTCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-------TSCCEECCGGGCCCCSC
T ss_pred hHHHHHHHHhc-CCCCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHhc-------CCceEEeeeccCCCCCc
Confidence 55566666643 35689999999999999999998899999999999999999986 36778899888667789
Q ss_pred eeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCC----CCCCcccCHHHHHHHHhcCC-CcEEEEeec
Q 024021 175 FDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHV----GGPPYKVSVSDYEEVLQPMG-FQAISIVDN 249 (274)
Q Consensus 175 ~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~ 249 (274)
||+|++..++++++.+....+++++.++|+|||++++......... ......++.+++.++++++| |+++.+...
T Consensus 103 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~ 182 (211)
T 3e23_A 103 YDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVESS 182 (211)
T ss_dssp EEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEE
T ss_pred EEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEEec
Confidence 9999999999999877888999999999999999999875543221 11122358999999999999 999998775
Q ss_pred cc
Q 024021 250 KL 251 (274)
Q Consensus 250 ~~ 251 (274)
..
T Consensus 183 ~~ 184 (211)
T 3e23_A 183 EG 184 (211)
T ss_dssp EE
T ss_pred cC
Confidence 54
No 12
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.84 E-value=3.7e-20 Score=152.88 Aligned_cols=136 Identities=17% Similarity=0.144 Sum_probs=114.4
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFCA 186 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~ 186 (274)
.++.+|||+|||+|.++..+++.+.+|+|+|+++.+++.|+++... +++++.+|+.+..++++||+|++..+++|
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~-----~v~~~~~d~~~~~~~~~fD~v~~~~~l~~ 115 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRLKD-----GITYIHSRFEDAQLPRRYDNIVLTHVLEH 115 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHHSCS-----CEEEEESCGGGCCCSSCEEEEEEESCGGG
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhhhC-----CeEEEEccHHHcCcCCcccEEEEhhHHHh
Confidence 4567999999999999999999888999999999999999998743 59999999988766788999999999999
Q ss_pred cChhHHHHHHHHHH-hcccCCcEEEEEEccCCCC----------------------CCCCCcccCHHHHHHHHhcCCCcE
Q 024021 187 IEPEMRAAWAQKIK-DFLKPDGELITLMFPISDH----------------------VGGPPYKVSVSDYEEVLQPMGFQA 243 (274)
Q Consensus 187 ~~~~~~~~~l~~~~-~~L~pgG~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~l~~~Gf~~ 243 (274)
+++. ..+++++. ++|+|||++++........ ..+....++.+++.++++++||++
T Consensus 116 ~~~~--~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 193 (250)
T 2p7i_A 116 IDDP--VALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQV 193 (250)
T ss_dssp CSSH--HHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEE
T ss_pred hcCH--HHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCeE
Confidence 9644 68999999 9999999999988554310 011123468999999999999999
Q ss_pred EEEeec
Q 024021 244 ISIVDN 249 (274)
Q Consensus 244 ~~~~~~ 249 (274)
+.....
T Consensus 194 ~~~~~~ 199 (250)
T 2p7i_A 194 TYRSGI 199 (250)
T ss_dssp EEEEEE
T ss_pred EEEeee
Confidence 988753
No 13
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.83 E-value=8.2e-20 Score=152.46 Aligned_cols=155 Identities=21% Similarity=0.265 Sum_probs=125.9
Q ss_pred cHHHHHHHhcCCC-CCCeEEEEcCCcchhHHHhhCC-CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCC
Q 024021 95 APIIVHLHQSGAL-PKGRALVPGCGTGYDVVAMASP-ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCP 171 (274)
Q Consensus 95 ~~~~~~~~~~~~~-~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~ 171 (274)
......++..... ++.+|||+|||+|..+..+++. +.+|+|+|+++.+++.++++.... ++++++.+|+.+ +.+
T Consensus 41 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~ 117 (266)
T 3ujc_A 41 LEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN---NKIIFEANDILTKEFP 117 (266)
T ss_dssp HHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC---TTEEEEECCTTTCCCC
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC---CCeEEEECccccCCCC
Confidence 4445566665543 4579999999999999999885 889999999999999999988655 579999999988 445
Q ss_pred CCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCC-C----------CCcccCHHHHHHHHhcCC
Q 024021 172 TELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVG-G----------PPYKVSVSDYEEVLQPMG 240 (274)
Q Consensus 172 ~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~-~----------~~~~~~~~~~~~~l~~~G 240 (274)
.++||+|++..++++++++....+++++.++|+|||.+++.++....... . .....+.+++.++++++|
T Consensus 118 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 197 (266)
T 3ujc_A 118 ENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACN 197 (266)
T ss_dssp TTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTT
T ss_pred CCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcC
Confidence 68999999999999998778889999999999999999998865443100 0 112348999999999999
Q ss_pred CcEEEEeecccc
Q 024021 241 FQAISIVDNKLA 252 (274)
Q Consensus 241 f~~~~~~~~~~~ 252 (274)
|+++.+......
T Consensus 198 f~~~~~~~~~~~ 209 (266)
T 3ujc_A 198 FKNVVSKDLSDY 209 (266)
T ss_dssp CEEEEEEECHHH
T ss_pred CeEEEEEeCCHH
Confidence 999998875543
No 14
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.83 E-value=6.3e-20 Score=149.10 Aligned_cols=139 Identities=21% Similarity=0.225 Sum_probs=115.1
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFCA 186 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~ 186 (274)
.++.+|||+|||+|.++..+++.+.+++|+|+++.+++.++++.. .+++++.+|+.+....++||+|++..++++
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~ 118 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAKEKLP-----KEFSITEGDFLSFEVPTSIDTIVSTYAFHH 118 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHHHHSC-----TTCCEESCCSSSCCCCSCCSEEEEESCGGG
T ss_pred cCCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCC-----CceEEEeCChhhcCCCCCeEEEEECcchhc
Confidence 356899999999999999999888999999999999999999875 368999999998544489999999999999
Q ss_pred cChhHHHHHHHHHHhcccCCcEEEEEEccCCCC-----------CCC---------CCcccCHHHHHHHHhcCCCcEEEE
Q 024021 187 IEPEMRAAWAQKIKDFLKPDGELITLMFPISDH-----------VGG---------PPYKVSVSDYEEVLQPMGFQAISI 246 (274)
Q Consensus 187 ~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~-----------~~~---------~~~~~~~~~~~~~l~~~Gf~~~~~ 246 (274)
+++.....+++++.++|+|||.+++.+...... ..+ ..+..+.+++.++++++||+++..
T Consensus 119 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~ 198 (220)
T 3hnr_A 119 LTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTFT 198 (220)
T ss_dssp SCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEEE
T ss_pred CChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEEe
Confidence 987766679999999999999999987443221 001 113347899999999999998887
Q ss_pred eecc
Q 024021 247 VDNK 250 (274)
Q Consensus 247 ~~~~ 250 (274)
....
T Consensus 199 ~~~~ 202 (220)
T 3hnr_A 199 RLNH 202 (220)
T ss_dssp ECSS
T ss_pred eccc
Confidence 6643
No 15
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.83 E-value=2.3e-19 Score=152.50 Aligned_cols=142 Identities=17% Similarity=0.186 Sum_probs=118.3
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC-CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCCCCeeEEEecccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASP-ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPTELFDLIFDYTFF 184 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~v~~~~~~ 184 (274)
.++.+|||+|||+|..+..+++. +.+|+|+|+++.+++.|+++....+..++++++.+|+.+ +.++++||+|++..++
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 160 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDAF 160 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESCG
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecchh
Confidence 45679999999999999999885 789999999999999999998777666789999999988 4456789999999999
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCC-----------CCCcccCHHHHHHHHhcCCCcEEEEeecc
Q 024021 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVG-----------GPPYKVSVSDYEEVLQPMGFQAISIVDNK 250 (274)
Q Consensus 185 ~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 250 (274)
+|+++ ...+++++.++|+|||++++.+........ ..+...+.+++.++++++||+++.+....
T Consensus 161 ~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 235 (297)
T 2o57_A 161 LHSPD--KLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRSLAKECGLVTLRTFSRP 235 (297)
T ss_dssp GGCSC--HHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHHHHHHTTEEEEEEEECH
T ss_pred hhcCC--HHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCCCCCCHHHHHHHHHHCCCeEEEEEECc
Confidence 99965 578999999999999999998765432211 11223488999999999999999987754
No 16
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.83 E-value=2e-19 Score=143.69 Aligned_cols=164 Identities=13% Similarity=0.201 Sum_probs=128.3
Q ss_pred cccchhHhhhcCCCCccCCCccHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcC
Q 024021 74 SSGGWEKCWEEGLTPWDIGQPAPIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSL 153 (274)
Q Consensus 74 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~ 153 (274)
...+|...|... .....+...+. ..++.+|||+|||+|..+..+++.+.+++++|+++.+++.++++....
T Consensus 7 ~~~~~~~~~~~~-------~~~~~l~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~ 77 (199)
T 2xvm_A 7 DENYFTDKYELT-------RTHSEVLEAVK--VVKPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIE 77 (199)
T ss_dssp CTTHHHHHHTCC-------CCCHHHHHHTT--TSCSCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred chHHHhhhhccc-------cccHHHHHHhh--ccCCCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhC
Confidence 346677777542 22444555554 345679999999999999999988889999999999999999988665
Q ss_pred CCCcceEEEEcccCCCCCCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC-CC--CCCcccCHH
Q 024021 154 PNAKFVSFLKADFFTWCPTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH-VG--GPPYKVSVS 230 (274)
Q Consensus 154 ~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~-~~--~~~~~~~~~ 230 (274)
+. .+++++.+|+.+....++||+|++..++++++++....+++.+.++|+|||.+++........ .. ...+.++.+
T Consensus 78 ~~-~~~~~~~~d~~~~~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~ 156 (199)
T 2xvm_A 78 NL-DNLHTRVVDLNNLTFDRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEG 156 (199)
T ss_dssp TC-TTEEEEECCGGGCCCCCCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTT
T ss_pred CC-CCcEEEEcchhhCCCCCCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHH
Confidence 44 359999999988544778999999999999987778899999999999999987765433222 11 123456899
Q ss_pred HHHHHHhcCCCcEEEEeec
Q 024021 231 DYEEVLQPMGFQAISIVDN 249 (274)
Q Consensus 231 ~~~~~l~~~Gf~~~~~~~~ 249 (274)
++.++++. |+++.....
T Consensus 157 ~l~~~~~~--f~~~~~~~~ 173 (199)
T 2xvm_A 157 ELRRYYEG--WERVKYNED 173 (199)
T ss_dssp HHHHHTTT--SEEEEEECC
T ss_pred HHHHHhcC--CeEEEeccc
Confidence 99999987 999888664
No 17
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.83 E-value=1.2e-19 Score=153.02 Aligned_cols=163 Identities=20% Similarity=0.251 Sum_probs=126.9
Q ss_pred HHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCee
Q 024021 97 IIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFD 176 (274)
Q Consensus 97 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D 176 (274)
.+...+. ..++.+|||+|||+|.++..+++++.+|+|+|+++.+++.++++. +++++..+|+.+...+++||
T Consensus 48 ~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~fD 119 (279)
T 3ccf_A 48 DLLQLLN--PQPGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQNY------PHLHFDVADARNFRVDKPLD 119 (279)
T ss_dssp HHHHHHC--CCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHC------TTSCEEECCTTTCCCSSCEE
T ss_pred HHHHHhC--CCCCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHhhC------CCCEEEECChhhCCcCCCcC
Confidence 3444443 345689999999999999999998899999999999999999886 46889999998855567899
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC--------------------CCCCCcccCHHHHHHHH
Q 024021 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH--------------------VGGPPYKVSVSDYEEVL 236 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~l 236 (274)
+|++..+++++++ ...++.++.++|+|||++++........ ...+....+.+++.+++
T Consensus 120 ~v~~~~~l~~~~d--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 197 (279)
T 3ccf_A 120 AVFSNAMLHWVKE--PEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALYNALETLGIHNPQALNPWYFPSIGEYVNIL 197 (279)
T ss_dssp EEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEECTTTTHHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHHH
T ss_pred EEEEcchhhhCcC--HHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHhcCCccccCcCceeCCCHHHHHHHH
Confidence 9999999999864 3578999999999999999877654321 01112345899999999
Q ss_pred hcCCCcEEEEeecccccCCccchhHHHHhhhhh
Q 024021 237 QPMGFQAISIVDNKLAIGPRKGREKLGRWKRSV 269 (274)
Q Consensus 237 ~~~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (274)
+++||+++.+.....+.....+.+.+..|.+..
T Consensus 198 ~~aGf~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 230 (279)
T 3ccf_A 198 EKQGFDVTYAALFNRPTTLAEGEFGMANWIQMF 230 (279)
T ss_dssp HHHTEEEEEEEEEECCEECSSGGGHHHHHHHHH
T ss_pred HHcCCEEEEEEEecccccccCCHHHHHHHHHHh
Confidence 999999998877665554432455666666543
No 18
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.83 E-value=4.2e-20 Score=151.31 Aligned_cols=174 Identities=21% Similarity=0.221 Sum_probs=123.7
Q ss_pred ccchhHhhhcCCCCccCCCccHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCC
Q 024021 75 SGGWEKCWEEGLTPWDIGQPAPIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLP 154 (274)
Q Consensus 75 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~ 154 (274)
..+|+..|....... ......+... ..++.+|||+|||+|.++..+++.+.+|+++|+++.+++.++++....+
T Consensus 3 ~~yw~~~~~~~~~~~--~~~~~~~~~~----~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 76 (235)
T 3sm3_A 3 ESYWEKVSGKNIPSS--LDLYPIIHNY----LQEDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAARSPG 76 (235)
T ss_dssp -----------------CCCCTTHHHH----CCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTCCS
T ss_pred hhHHHHHhhccCCCH--HHHHHHHHHh----CCCCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcC
Confidence 356777665432211 1112223333 2356899999999999999999888999999999999999999987765
Q ss_pred C----CcceEEEEcccCC-CCCCCCeeEEEecccccccCh-hHHHHHHHHHHhcccCCcEEEEEEccCCCCC--------
Q 024021 155 N----AKFVSFLKADFFT-WCPTELFDLIFDYTFFCAIEP-EMRAAWAQKIKDFLKPDGELITLMFPISDHV-------- 220 (274)
Q Consensus 155 ~----~~~~~~~~~d~~~-~~~~~~~D~v~~~~~~~~~~~-~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~-------- 220 (274)
. ..++++..+|+.. ..+.++||+|++..+++++++ .....+++++.++|+|||.+++.++......
T Consensus 77 ~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~ 156 (235)
T 3sm3_A 77 LNQKTGGKAEFKVENASSLSFHDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYL 156 (235)
T ss_dssp CCSSSSCEEEEEECCTTSCCSCTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHH
T ss_pred CccccCcceEEEEecccccCCCCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhh
Confidence 4 2368999999988 445678999999999999964 4566899999999999999999876442110
Q ss_pred ------------------CC----CCcccCHHHHHHHHhcCCCcEEEEeecccccC
Q 024021 221 ------------------GG----PPYKVSVSDYEEVLQPMGFQAISIVDNKLAIG 254 (274)
Q Consensus 221 ------------------~~----~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~ 254 (274)
.+ ....++.+++.++++++||+++.+........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~~~~~~ 212 (235)
T 3sm3_A 157 HDFPITKEEGSFLARDPETGETEFIAHHFTEKELVFLLTDCRFEIDYFRVKELETR 212 (235)
T ss_dssp HHHHHHCSTTEEEEECTTTCCEEEEEECBCHHHHHHHHHTTTEEEEEEEEEEEECT
T ss_pred hhccchhhhcceEecccccCCcceeeEeCCHHHHHHHHHHcCCEEEEEEecceeec
Confidence 00 01246899999999999999999987554443
No 19
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.83 E-value=2.4e-19 Score=145.24 Aligned_cols=148 Identities=18% Similarity=0.246 Sum_probs=117.7
Q ss_pred HHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCee
Q 024021 97 IIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFD 176 (274)
Q Consensus 97 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D 176 (274)
.+...+.. ..++.+|||+|||+|.++..+++.+.+++++|+++.+++.+++. + ..+++++.+|+.+..+.++||
T Consensus 36 ~~~~~l~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~----~-~~~~~~~~~d~~~~~~~~~~D 109 (218)
T 3ou2_A 36 AALERLRA-GNIRGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGRH----G-LDNVEFRQQDLFDWTPDRQWD 109 (218)
T ss_dssp HHHHHHTT-TTSCSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGGG----C-CTTEEEEECCTTSCCCSSCEE
T ss_pred HHHHHHhc-CCCCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHhc----C-CCCeEEEecccccCCCCCcee
Confidence 34444432 23457999999999999999988888999999999999999881 1 146999999999887778999
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCC------------------CCC-----CcccCHHHHH
Q 024021 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHV------------------GGP-----PYKVSVSDYE 233 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~------------------~~~-----~~~~~~~~~~ 233 (274)
+|++..++++++++....+++++.++|+|||.+++.++...... .+. ...++.+++.
T Consensus 110 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (218)
T 3ou2_A 110 AVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELT 189 (218)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC------------CEEEEECTTSCEEEEECCCCCHHHHH
T ss_pred EEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccceeeecCCcchhhHhhcCCCHHHHH
Confidence 99999999999887778999999999999999999876543210 011 1134889999
Q ss_pred HHHhcCCCcEEEEeecc
Q 024021 234 EVLQPMGFQAISIVDNK 250 (274)
Q Consensus 234 ~~l~~~Gf~~~~~~~~~ 250 (274)
++++++||++.......
T Consensus 190 ~~l~~aGf~v~~~~~~~ 206 (218)
T 3ou2_A 190 ERLTALGWSCSVDEVHP 206 (218)
T ss_dssp HHHHHTTEEEEEEEEET
T ss_pred HHHHHCCCEEEeeeccc
Confidence 99999999966655433
No 20
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.83 E-value=1.5e-19 Score=154.82 Aligned_cols=141 Identities=16% Similarity=0.135 Sum_probs=119.2
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC-CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-CCCCCeeEEEecccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASP-ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-CPTELFDLIFDYTFF 184 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~~ 184 (274)
.++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.|+++....++.++++++.+|+.+. .+.++||+|++..++
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 195 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNEST 195 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEESCG
T ss_pred CCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECCch
Confidence 34579999999999999999886 8899999999999999999998888777899999999884 456899999999999
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCC------------CCcccCHHHHHHHHhcCCCcEEEEeecc
Q 024021 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGG------------PPYKVSVSDYEEVLQPMGFQAISIVDNK 250 (274)
Q Consensus 185 ~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 250 (274)
++++ ...+++++.++|+|||++++.+......... .+...+.+++.++++++||+++.+....
T Consensus 196 ~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~~~~ 270 (312)
T 3vc1_A 196 MYVD---LHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPHTIVDLT 270 (312)
T ss_dssp GGSC---HHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEEEEECH
T ss_pred hhCC---HHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEEEEeCC
Confidence 9995 5789999999999999999987655432110 0123478999999999999999988755
No 21
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.83 E-value=1.3e-19 Score=153.29 Aligned_cols=152 Identities=20% Similarity=0.166 Sum_probs=122.2
Q ss_pred HHHHHhcCC-CCCCeEEEEcCCcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCe
Q 024021 98 IVHLHQSGA-LPKGRALVPGCGTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELF 175 (274)
Q Consensus 98 ~~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 175 (274)
+..++.... .++.+|||+|||+|..+..+++ .+.+|+|+|+++.+++.++++....+..+++++..+|+.+.. ++|
T Consensus 53 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~f 130 (287)
T 1kpg_A 53 IDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD--EPV 130 (287)
T ss_dssp HHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC--CCC
T ss_pred HHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC--CCe
Confidence 334444443 3457999999999999999884 577999999999999999999988777678999999997644 789
Q ss_pred eEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCC----C--------------------CCcccCHHH
Q 024021 176 DLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVG----G--------------------PPYKVSVSD 231 (274)
Q Consensus 176 D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~----~--------------------~~~~~~~~~ 231 (274)
|+|++..+++|++++....+++++.++|+|||.+++.++....... + .....+.++
T Consensus 131 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 210 (287)
T 1kpg_A 131 DRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPM 210 (287)
T ss_dssp SEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCHHH
T ss_pred eEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCCHHH
Confidence 9999999999997666788999999999999999997765432100 0 011248999
Q ss_pred HHHHHhcCCCcEEEEeeccc
Q 024021 232 YEEVLQPMGFQAISIVDNKL 251 (274)
Q Consensus 232 ~~~~l~~~Gf~~~~~~~~~~ 251 (274)
+.++++++||+++.+.....
T Consensus 211 ~~~~l~~aGf~~~~~~~~~~ 230 (287)
T 1kpg_A 211 VQECASANGFTVTRVQSLQP 230 (287)
T ss_dssp HHHHHHTTTCEEEEEEECHH
T ss_pred HHHHHHhCCcEEEEEEeCcH
Confidence 99999999999999876543
No 22
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.82 E-value=8.6e-19 Score=146.74 Aligned_cols=153 Identities=15% Similarity=0.098 Sum_probs=122.4
Q ss_pred cHHHHHHHhcCC--CCCCeEEEEcCCcchhHHHhhCC-CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-C
Q 024021 95 APIIVHLHQSGA--LPKGRALVPGCGTGYDVVAMASP-ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-C 170 (274)
Q Consensus 95 ~~~~~~~~~~~~--~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~ 170 (274)
.......+.... .++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.|+++....+..++++++.+|+.+. .
T Consensus 31 ~~~~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 110 (267)
T 3kkz_A 31 PEVTLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPF 110 (267)
T ss_dssp HHHHHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCC
T ss_pred HHHHHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCC
Confidence 344455555543 45689999999999999999885 4499999999999999999998888777899999999884 4
Q ss_pred CCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCC----------CCCcccCHHHHHHHHhcCC
Q 024021 171 PTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVG----------GPPYKVSVSDYEEVLQPMG 240 (274)
Q Consensus 171 ~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~l~~~G 240 (274)
+.++||+|++..++++++ ...+++.+.++|+|||++++.+........ ..+...+.+++.++++++|
T Consensus 111 ~~~~fD~i~~~~~~~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 187 (267)
T 3kkz_A 111 RNEELDLIWSEGAIYNIG---FERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAG 187 (267)
T ss_dssp CTTCEEEEEESSCGGGTC---HHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTT
T ss_pred CCCCEEEEEEcCCceecC---HHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCC
Confidence 567899999999999984 357899999999999999998754221100 0122347899999999999
Q ss_pred CcEEEEeecc
Q 024021 241 FQAISIVDNK 250 (274)
Q Consensus 241 f~~~~~~~~~ 250 (274)
|+++.+....
T Consensus 188 f~~v~~~~~~ 197 (267)
T 3kkz_A 188 YLPVATFILP 197 (267)
T ss_dssp EEEEEEEECC
T ss_pred CEEEEEEECC
Confidence 9999887644
No 23
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.82 E-value=3.6e-19 Score=152.04 Aligned_cols=144 Identities=17% Similarity=0.210 Sum_probs=118.5
Q ss_pred CCCCCeEEEEcCCcchhHHHhh--C-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecc
Q 024021 106 ALPKGRALVPGCGTGYDVVAMA--S-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYT 182 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~--~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~ 182 (274)
..++.+|||+|||+|..+..++ . ++.+|+++|+++.+++.|+++....+..++++++.+|+.+....++||+|+++.
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~ 195 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLTSNG 195 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEEECCS
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEEEECC
Confidence 4566899999999999999985 2 577999999999999999999988877778999999999854448999999999
Q ss_pred cccccCh-hHHHHHHHHHHhcccCCcEEEEEEccCCCCCC----------------------------CCCcccCHHHHH
Q 024021 183 FFCAIEP-EMRAAWAQKIKDFLKPDGELITLMFPISDHVG----------------------------GPPYKVSVSDYE 233 (274)
Q Consensus 183 ~~~~~~~-~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~ 233 (274)
+++++++ .....+++++.++|+|||++++.++....... +.....+.+++.
T Consensus 196 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (305)
T 3ocj_A 196 LNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQTR 275 (305)
T ss_dssp SGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHHH
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHHH
Confidence 9999854 44456899999999999999998765432110 011225899999
Q ss_pred HHHhcCCCcEEEEeec
Q 024021 234 EVLQPMGFQAISIVDN 249 (274)
Q Consensus 234 ~~l~~~Gf~~~~~~~~ 249 (274)
++++++||+++.+...
T Consensus 276 ~~l~~aGF~~v~~~~~ 291 (305)
T 3ocj_A 276 AQLEEAGFTDLRFEDD 291 (305)
T ss_dssp HHHHHTTCEEEEEECC
T ss_pred HHHHHCCCEEEEEEcc
Confidence 9999999999998763
No 24
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.82 E-value=4.5e-19 Score=148.76 Aligned_cols=154 Identities=20% Similarity=0.240 Sum_probs=123.8
Q ss_pred HHHHHhcCC-CCCCeEEEEcCCcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCCCC
Q 024021 98 IVHLHQSGA-LPKGRALVPGCGTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPTEL 174 (274)
Q Consensus 98 ~~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~ 174 (274)
...++.... .++.+|||+|||+|..+..+++ .+.+|+++|+++.+++.++++....+..++++++.+|+.+ +.++++
T Consensus 50 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 129 (273)
T 3bus_A 50 TDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDAS 129 (273)
T ss_dssp HHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTC
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCC
Confidence 334444443 3567999999999999999987 5789999999999999999998887776789999999988 445678
Q ss_pred eeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCC--------------CCCcccCHHHHHHHHhcCC
Q 024021 175 FDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVG--------------GPPYKVSVSDYEEVLQPMG 240 (274)
Q Consensus 175 ~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~l~~~G 240 (274)
||+|++..+++++++. ..+++++.++|+|||.+++.++....... ......+.+++.++++++|
T Consensus 130 fD~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 207 (273)
T 3bus_A 130 FDAVWALESLHHMPDR--GRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYESDVRQAE 207 (273)
T ss_dssp EEEEEEESCTTTSSCH--HHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHTT
T ss_pred ccEEEEechhhhCCCH--HHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHHhhcCccCCCCHHHHHHHHHHcC
Confidence 9999999999999643 68899999999999999998765432110 1223468899999999999
Q ss_pred CcEEEEeeccccc
Q 024021 241 FQAISIVDNKLAI 253 (274)
Q Consensus 241 f~~~~~~~~~~~~ 253 (274)
|+++.+......+
T Consensus 208 f~~~~~~~~~~~~ 220 (273)
T 3bus_A 208 LVVTSTVDISAQA 220 (273)
T ss_dssp CEEEEEEECHHHH
T ss_pred CeEEEEEECcHhH
Confidence 9999888765443
No 25
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.82 E-value=4.6e-19 Score=147.29 Aligned_cols=152 Identities=16% Similarity=0.135 Sum_probs=120.9
Q ss_pred cHHHHHHHhcCC-CCCCeEEEEcCCcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCC
Q 024021 95 APIIVHLHQSGA-LPKGRALVPGCGTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPT 172 (274)
Q Consensus 95 ~~~~~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 172 (274)
...+..++.... .++.+|||+|||+|..+..+++ .+.+++|+|+++.+++.|+++....+..++++++.+|+.+..+.
T Consensus 22 ~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 101 (256)
T 1nkv_A 22 EEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVAN 101 (256)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCCS
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCcC
Confidence 444555555543 4557999999999999998887 47799999999999999999998877767899999999885557
Q ss_pred CCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCC-----------CCCCcccCHHHHHHHHhcCCC
Q 024021 173 ELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHV-----------GGPPYKVSVSDYEEVLQPMGF 241 (274)
Q Consensus 173 ~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~l~~~Gf 241 (274)
++||+|++..+++++++ ...+++++.++|+|||.+++.+....... .......+.+++.++++++||
T Consensus 102 ~~fD~V~~~~~~~~~~~--~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 179 (256)
T 1nkv_A 102 EKCDVAACVGATWIAGG--FAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPGLVGAFDDLGY 179 (256)
T ss_dssp SCEEEEEEESCGGGTSS--SHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHHHHHHHHHTTTB
T ss_pred CCCCEEEECCChHhcCC--HHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCCHHHHHHHHHHCCC
Confidence 78999999999998853 36789999999999999998764322110 111134588999999999999
Q ss_pred cEEEEee
Q 024021 242 QAISIVD 248 (274)
Q Consensus 242 ~~~~~~~ 248 (274)
+++.+..
T Consensus 180 ~~~~~~~ 186 (256)
T 1nkv_A 180 DVVEMVL 186 (256)
T ss_dssp CCCEEEE
T ss_pred eeEEEEe
Confidence 9887654
No 26
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.82 E-value=2.3e-19 Score=145.74 Aligned_cols=160 Identities=9% Similarity=0.156 Sum_probs=120.2
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCC--CeEEEEeCChHHHHHHHHHhhcCCCCc----ceEEEEcccCCC-CCCCCeeEEE
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPE--RYVVGLEISDIAIKKAEELSSSLPNAK----FVSFLKADFFTW-CPTELFDLIF 179 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~----~~~~~~~d~~~~-~~~~~~D~v~ 179 (274)
.++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.|+++....++.. +++++.+|+... .+.++||+|+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~ 107 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAAT 107 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEE
Confidence 456899999999999999999854 699999999999999999987665443 799999999663 3457899999
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCC-----------CCCCcccCHHHHH----HHHhcCCCcEE
Q 024021 180 DYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHV-----------GGPPYKVSVSDYE----EVLQPMGFQAI 244 (274)
Q Consensus 180 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~-----------~~~~~~~~~~~~~----~~l~~~Gf~~~ 244 (274)
+..++++++++....+++++.++|+|||.++.......... ....+.++.+++. ++++++||++.
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~v~ 187 (219)
T 3jwg_A 108 VIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYGYSVR 187 (219)
T ss_dssp EESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHHHTEEEE
T ss_pred EHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceeeecHHHHHHHHHHHHHHCCcEEE
Confidence 99999999887778999999999999997776654322110 1122346888998 88999999775
Q ss_pred EEeecccccCCccchhHHHHhhh
Q 024021 245 SIVDNKLAIGPRKGREKLGRWKR 267 (274)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~ 267 (274)
... ........+...++.+|.+
T Consensus 188 ~~~-~g~~~~~~g~~~qi~~~~~ 209 (219)
T 3jwg_A 188 FLQ-IGEIDDEFGSPTQMGVFTL 209 (219)
T ss_dssp EEE-ESCCCTTSCCSEEEEEEEE
T ss_pred EEe-cCCccccCCCCeEEEEEec
Confidence 542 2223333334445555544
No 27
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.82 E-value=1.9e-19 Score=148.27 Aligned_cols=140 Identities=21% Similarity=0.308 Sum_probs=115.1
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-CCCCCeeEEEecccc
Q 024021 106 ALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-CPTELFDLIFDYTFF 184 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~~ 184 (274)
..++.+|||+|||+|.++..+++.+.+|+++|+++.+++.++++... .+++++.+|+.+. .+.++||+|++..++
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 126 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKGKERGEG----PDLSFIKGDLSSLPFENEQFEAIMAINSL 126 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHTTTCB----TTEEEEECBTTBCSSCTTCEEEEEEESCT
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhccc----CCceEEEcchhcCCCCCCCccEEEEcChH
Confidence 34678999999999999999999899999999999999999987522 5699999999884 456899999999999
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCC-----------CCCCcccCHHHHHHHHhcCCCcEEEEeeccc
Q 024021 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHV-----------GGPPYKVSVSDYEEVLQPMGFQAISIVDNKL 251 (274)
Q Consensus 185 ~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 251 (274)
+|+++ ...+++.+.++|+|||.+++..+...... ......++.+++.++++++||+++.......
T Consensus 127 ~~~~~--~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 202 (242)
T 3l8d_A 127 EWTEE--PLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDGIGVYK 202 (242)
T ss_dssp TSSSC--HHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEEEEEEC
T ss_pred hhccC--HHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEeecccc
Confidence 99853 35789999999999999999886543221 1112236889999999999999999876543
No 28
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.82 E-value=4.8e-19 Score=147.68 Aligned_cols=143 Identities=16% Similarity=0.133 Sum_probs=116.2
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCCCCeeEEEeccccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPTELFDLIFDYTFFC 185 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~v~~~~~~~ 185 (274)
.++.+|||+|||+|.++..+++.+.+|+++|+++.+++.|+++....+. .+++++.+|+.+ +.++++||+|++..+++
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~l~~~~~~fD~V~~~~~l~ 114 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGNGH-QQVEYVQGDAEQMPFTDERFHIVTCRIAAH 114 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEECCC-CCCSCTTCEEEEEEESCGG
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCC-CceEEEEecHHhCCCCCCCEEEEEEhhhhH
Confidence 4568999999999999999998778999999999999999999876654 369999999988 44567999999999999
Q ss_pred ccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC--------------CCCCCcccCHHHHHHHHhcCCCcEEEEeeccc
Q 024021 186 AIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH--------------VGGPPYKVSVSDYEEVLQPMGFQAISIVDNKL 251 (274)
Q Consensus 186 ~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 251 (274)
++++. ..++.++.++|+|||++++.+...... .......++.+++.++++++||+++.+.....
T Consensus 115 ~~~d~--~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~ 192 (260)
T 1vl5_A 115 HFPNP--ASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNYVEKERDYSHHRAWKKSDWLKMLEEAGFELEELHCFHK 192 (260)
T ss_dssp GCSCH--HHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHHTCEEEEEEEEEE
T ss_pred hcCCH--HHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHHHHHHhcCccccCCCCHHHHHHHHHHCCCeEEEEEEeec
Confidence 99643 588999999999999999876543221 01112335789999999999999988877654
Q ss_pred c
Q 024021 252 A 252 (274)
Q Consensus 252 ~ 252 (274)
.
T Consensus 193 ~ 193 (260)
T 1vl5_A 193 T 193 (260)
T ss_dssp E
T ss_pred c
Confidence 3
No 29
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.81 E-value=4.3e-20 Score=154.47 Aligned_cols=177 Identities=15% Similarity=0.106 Sum_probs=123.9
Q ss_pred cccchhHhhhcCCCCccCC----CccHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHH
Q 024021 74 SSGGWEKCWEEGLTPWDIG----QPAPIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEE 148 (274)
Q Consensus 74 ~~~~w~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~ 148 (274)
...+|+.+|.......... -+...+.+++.....++.+|||+|||+|..+..++..++ +|+|+|+|+.+++.|++
T Consensus 17 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~ 96 (263)
T 2a14_A 17 PRDYLATYYSFDGSPSPEAEMLKFNLECLHKTFGPGGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEK 96 (263)
T ss_dssp HHHHHHHHCCCCCSCCHHHHHHHHHHHHHHHHHSTTSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHhcCCCcccchhhHHHHHHHHHHHHHhcCCCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHH
Confidence 3467888887644321100 011223333332345567999999999988887777776 79999999999999998
Q ss_pred HhhcCCC----------------------------CcceE-EEEcccCCCC-----CCCCeeEEEecccccccC--hhHH
Q 024021 149 LSSSLPN----------------------------AKFVS-FLKADFFTWC-----PTELFDLIFDYTFFCAIE--PEMR 192 (274)
Q Consensus 149 ~~~~~~~----------------------------~~~~~-~~~~d~~~~~-----~~~~~D~v~~~~~~~~~~--~~~~ 192 (274)
++..... ..++. ++.+|+.+.. ..++||+|+++.+++++. .+..
T Consensus 97 ~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~ 176 (263)
T 2a14_A 97 WLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAY 176 (263)
T ss_dssp HHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHH
T ss_pred HHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHH
Confidence 7654310 01243 8899998732 246899999999999863 3566
Q ss_pred HHHHHHHHhcccCCcEEEEEEccCCCC-CCC----CCcccCHHHHHHHHhcCCCcEEEEeecc
Q 024021 193 AAWAQKIKDFLKPDGELITLMFPISDH-VGG----PPYKVSVSDYEEVLQPMGFQAISIVDNK 250 (274)
Q Consensus 193 ~~~l~~~~~~L~pgG~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 250 (274)
..++.+++++|||||.+++........ ..+ ..+.++.+++.++++++||+++.+....
T Consensus 177 ~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~aGF~i~~~~~~~ 239 (263)
T 2a14_A 177 RAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKGEVEQAVLDAGFDIEQLLHSP 239 (263)
T ss_dssp HHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEeeccccCHHHHHHHHHHCCCEEEEEeecc
Confidence 789999999999999999986432211 001 1123589999999999999999987754
No 30
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.81 E-value=3.9e-19 Score=146.64 Aligned_cols=142 Identities=13% Similarity=0.139 Sum_probs=116.2
Q ss_pred CCCeEEEEcCCcchhHHHhhCCC-CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-CCCCCeeEEEeccccc
Q 024021 108 PKGRALVPGCGTGYDVVAMASPE-RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-CPTELFDLIFDYTFFC 185 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~~~ 185 (274)
++.+|||+|||+|..+..+++.+ .+|+++|+++.+++.|+++....+ ..+++++.+|+.+. .+.++||+|++..+++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 157 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEG-KRVRNYFCCGLQDFTPEPDSYDVIWIQWVIG 157 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGG-GGEEEEEECCGGGCCCCSSCEEEEEEESCGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcC-CceEEEEEcChhhcCCCCCCEEEEEEcchhh
Confidence 46899999999999999998864 499999999999999999987653 24689999998774 3445899999999999
Q ss_pred ccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC----CCCCCcccCHHHHHHHHhcCCCcEEEEeecc
Q 024021 186 AIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH----VGGPPYKVSVSDYEEVLQPMGFQAISIVDNK 250 (274)
Q Consensus 186 ~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 250 (274)
+++++....+++++.++|+|||++++.+...... .....+..+.+++.++++++||+++......
T Consensus 158 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 226 (241)
T 2ex4_A 158 HLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEERQE 226 (241)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEEECC
T ss_pred hCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEeeecC
Confidence 9987777889999999999999999977543320 1112233489999999999999999987643
No 31
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.81 E-value=4e-19 Score=144.19 Aligned_cols=141 Identities=19% Similarity=0.210 Sum_probs=117.6
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC---CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCCCCeeEEEecc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASP---ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPTELFDLIFDYT 182 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~v~~~~ 182 (274)
.++.+|||+|||+|.++..+++. ..+++++|+++.+++.++++....+.. +++++.+|+.+ ..+.++||+|++..
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~~~~~fD~v~~~~ 114 (219)
T 3dh0_A 36 KEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLK-NVEVLKSEENKIPLPDNTVDFIFMAF 114 (219)
T ss_dssp CTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECBTTBCSSCSSCEEEEEEES
T ss_pred CCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEecccccCCCCCCCeeEEEeeh
Confidence 45679999999999999999874 479999999999999999998766543 69999999987 44567899999999
Q ss_pred cccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCC--cccCHHHHHHHHhcCCCcEEEEeecc
Q 024021 183 FFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPP--YKVSVSDYEEVLQPMGFQAISIVDNK 250 (274)
Q Consensus 183 ~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~Gf~~~~~~~~~ 250 (274)
+++++++ ...+++++.++|+|||.+++.++.......+.. ..++.+++.++++++||+++......
T Consensus 115 ~l~~~~~--~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 182 (219)
T 3dh0_A 115 TFHELSE--PLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVEVG 182 (219)
T ss_dssp CGGGCSS--HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEEET
T ss_pred hhhhcCC--HHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEeeC
Confidence 9999853 468899999999999999998877655433332 33689999999999999998876643
No 32
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.81 E-value=5.6e-19 Score=143.30 Aligned_cols=140 Identities=11% Similarity=0.141 Sum_probs=112.4
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCC--CeEEEEeCChHHHHHHHHHhhcCCCCc----ceEEEEcccCCC-CCCCCeeEEE
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPE--RYVVGLEISDIAIKKAEELSSSLPNAK----FVSFLKADFFTW-CPTELFDLIF 179 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~----~~~~~~~d~~~~-~~~~~~D~v~ 179 (274)
.++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.|++++...+... +++++.+|+... .+.++||+|+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 107 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAAT 107 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEe
Confidence 456899999999999999998754 599999999999999999987766543 799999998653 3346899999
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCC-----------CCCCCCCcccCHHHHH----HHHhcCCCcEE
Q 024021 180 DYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPIS-----------DHVGGPPYKVSVSDYE----EVLQPMGFQAI 244 (274)
Q Consensus 180 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~-----------~~~~~~~~~~~~~~~~----~~l~~~Gf~~~ 244 (274)
+..++++++++....+++.+.++|+|||.+++...... .......+.++.+++. ++++++||+++
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Gf~v~ 187 (217)
T 3jwh_A 108 VIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFANLPAGKLRHKDHRFEWTRSQFQNWANKITERFAYNVQ 187 (217)
T ss_dssp EESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC-----------CCSCBCHHHHHHHHHHHHHHSSEEEE
T ss_pred eHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccchhhcccccccccccccccccCHHHHHHHHHHHHHHcCceEE
Confidence 99999999888888999999999999998777654321 0011223446889998 99999999875
Q ss_pred EE
Q 024021 245 SI 246 (274)
Q Consensus 245 ~~ 246 (274)
..
T Consensus 188 ~~ 189 (217)
T 3jwh_A 188 FQ 189 (217)
T ss_dssp EC
T ss_pred EE
Confidence 54
No 33
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.81 E-value=6.6e-19 Score=147.06 Aligned_cols=145 Identities=15% Similarity=0.157 Sum_probs=115.3
Q ss_pred HHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeE
Q 024021 98 IVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDL 177 (274)
Q Consensus 98 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~ 177 (274)
+..++.....++.+|||+|||+|.++..+++.+.+|+|+|+++.+++.|+++.. +++++.+|+.+....++||+
T Consensus 40 ~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~------~~~~~~~d~~~~~~~~~fD~ 113 (263)
T 3pfg_A 40 LAALVRRHSPKAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARRRNP------DAVLHHGDMRDFSLGRRFSA 113 (263)
T ss_dssp HHHHHHHHCTTCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHHHCT------TSEEEECCTTTCCCSCCEEE
T ss_pred HHHHHHhhCCCCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhCC------CCEEEECChHHCCccCCcCE
Confidence 334443333456899999999999999999988999999999999999999863 68999999998655789999
Q ss_pred EEecc-cccccCh-hHHHHHHHHHHhcccCCcEEEEEEccCCCCC-----------------------------------
Q 024021 178 IFDYT-FFCAIEP-EMRAAWAQKIKDFLKPDGELITLMFPISDHV----------------------------------- 220 (274)
Q Consensus 178 v~~~~-~~~~~~~-~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~----------------------------------- 220 (274)
|++.. ++++++. +....+++++.++|+|||.+++..+......
T Consensus 114 v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (263)
T 3pfg_A 114 VTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVH 193 (263)
T ss_dssp EEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEE
T ss_pred EEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEEEE
Confidence 99998 9999864 5677899999999999999999643222110
Q ss_pred -----CC-C---------CcccCHHHHHHHHhcCCCcEEEEee
Q 024021 221 -----GG-P---------PYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 221 -----~~-~---------~~~~~~~~~~~~l~~~Gf~~~~~~~ 248 (274)
.+ . ...++.+++.++|+++||+++.+..
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~ 236 (263)
T 3pfg_A 194 YLVAGPDRGITHHEESHRITLFTREQYERAFTAAGLSVEFMPG 236 (263)
T ss_dssp EEEEETTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESS
T ss_pred EEEecCCCcEEEEEEEEEEEeecHHHHHHHHHHCCCEEEEeeC
Confidence 00 0 1124789999999999999988744
No 34
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.81 E-value=5.2e-19 Score=151.83 Aligned_cols=152 Identities=16% Similarity=0.115 Sum_probs=123.7
Q ss_pred HHHHHhcCC-CCCCeEEEEcCCcchhHHHhhCC-CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCe
Q 024021 98 IVHLHQSGA-LPKGRALVPGCGTGYDVVAMASP-ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELF 175 (274)
Q Consensus 98 ~~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 175 (274)
+..++.... .++.+|||+|||+|..+..+++. +.+|+|+|+++.+++.|+++....+..+++++..+|+.+.. ++|
T Consensus 79 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~f 156 (318)
T 2fk8_A 79 VDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA--EPV 156 (318)
T ss_dssp HHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC--CCC
T ss_pred HHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC--CCc
Confidence 344444443 35579999999999999999875 88999999999999999999988777678999999997653 789
Q ss_pred eEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCC------------------------CCCcccCHHH
Q 024021 176 DLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVG------------------------GPPYKVSVSD 231 (274)
Q Consensus 176 D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~------------------------~~~~~~~~~~ 231 (274)
|+|++..++++++++....+++++.++|+|||.+++.++....... ......+.++
T Consensus 157 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 236 (318)
T 2fk8_A 157 DRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTEM 236 (318)
T ss_dssp SEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCCHHH
T ss_pred CEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCCHHH
Confidence 9999999999998767789999999999999999998766543100 0012348999
Q ss_pred HHHHHhcCCCcEEEEeeccc
Q 024021 232 YEEVLQPMGFQAISIVDNKL 251 (274)
Q Consensus 232 ~~~~l~~~Gf~~~~~~~~~~ 251 (274)
+.++++++||+++.+.....
T Consensus 237 ~~~~l~~aGf~~~~~~~~~~ 256 (318)
T 2fk8_A 237 MVEHGEKAGFTVPEPLSLRP 256 (318)
T ss_dssp HHHHHHHTTCBCCCCEECHH
T ss_pred HHHHHHhCCCEEEEEEecch
Confidence 99999999999988776543
No 35
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.81 E-value=6.3e-19 Score=146.22 Aligned_cols=150 Identities=15% Similarity=0.090 Sum_probs=120.1
Q ss_pred HHHHHhcCC-CCCCeEEEEcCCcchhHHHhhCCC-CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-CCCCC
Q 024021 98 IVHLHQSGA-LPKGRALVPGCGTGYDVVAMASPE-RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-CPTEL 174 (274)
Q Consensus 98 ~~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~~ 174 (274)
...++.... .++.+|||+|||+|.++..+++.+ .+|+++|+++.+++.++++.... .+++++.+|+.+. .+.++
T Consensus 82 ~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~~~~ 158 (254)
T 1xtp_A 82 SRNFIASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM---PVGKFILASMETATLPPNT 158 (254)
T ss_dssp HHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS---SEEEEEESCGGGCCCCSSC
T ss_pred HHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC---CceEEEEccHHHCCCCCCC
Confidence 344555443 346899999999999999998764 47999999999999999998654 5799999999874 45578
Q ss_pred eeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC-----CCCCCcccCHHHHHHHHhcCCCcEEEEeec
Q 024021 175 FDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH-----VGGPPYKVSVSDYEEVLQPMGFQAISIVDN 249 (274)
Q Consensus 175 ~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 249 (274)
||+|++..++++++++....+++++.++|+|||++++.+...... .....+..+.+++.++++++||+++.+...
T Consensus 159 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 238 (254)
T 1xtp_A 159 YDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKEAFQ 238 (254)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEEEEC
T ss_pred eEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEeeec
Confidence 999999999999987778899999999999999999987532211 112233458899999999999999988764
Q ss_pred c
Q 024021 250 K 250 (274)
Q Consensus 250 ~ 250 (274)
.
T Consensus 239 ~ 239 (254)
T 1xtp_A 239 E 239 (254)
T ss_dssp T
T ss_pred C
Confidence 3
No 36
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.80 E-value=1e-18 Score=143.99 Aligned_cols=144 Identities=15% Similarity=0.176 Sum_probs=117.2
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCCCCeeEEEecccc
Q 024021 106 ALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPTELFDLIFDYTFF 184 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~v~~~~~~ 184 (274)
..++.+|||+|||+|.++..+++.+.+++++|+++.+++.++++....+. .+++++.+|+.+ ..++++||+|++..++
T Consensus 19 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~fD~v~~~~~l 97 (239)
T 1xxl_A 19 CRAEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEKGV-ENVRFQQGTAESLPFPDDSFDIITCRYAA 97 (239)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTC-CSEEEEECBTTBCCSCTTCEEEEEEESCG
T ss_pred cCCCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCC-CCeEEEecccccCCCCCCcEEEEEECCch
Confidence 34568999999999999999998888999999999999999998866544 369999999987 3455789999999999
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC--------------CCCCCcccCHHHHHHHHhcCCCcEEEEeecc
Q 024021 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH--------------VGGPPYKVSVSDYEEVLQPMGFQAISIVDNK 250 (274)
Q Consensus 185 ~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 250 (274)
+++++ ...++.++.++|+|||.+++.+...... .......++.+++.++++++||.++.+....
T Consensus 98 ~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~~~~~ 175 (239)
T 1xxl_A 98 HHFSD--VRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVNHLNRLRDPSHVRESSLSEWQAMFSANQLAYQDIQKWN 175 (239)
T ss_dssp GGCSC--HHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHTTEEEEEEEEEE
T ss_pred hhccC--HHHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHHHHHHhccccccCCCCHHHHHHHHHHCCCcEEEEEeec
Confidence 99864 4678999999999999999976544221 1111233589999999999999999887764
Q ss_pred cc
Q 024021 251 LA 252 (274)
Q Consensus 251 ~~ 252 (274)
.+
T Consensus 176 ~~ 177 (239)
T 1xxl_A 176 LP 177 (239)
T ss_dssp EE
T ss_pred Cc
Confidence 43
No 37
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.80 E-value=3.9e-19 Score=147.58 Aligned_cols=142 Identities=19% Similarity=0.278 Sum_probs=114.2
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-CCCCCeeEEEecccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-CPTELFDLIFDYTFF 184 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~~ 184 (274)
.++.+|||+|||+|..+..+++.+. +|+|+|+++.+++.|+++.. ..+++++.+|+.+. .+.++||+|++..++
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 118 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT----SPVVCYEQKAIEDIAIEPDAYNVVLSSLAL 118 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC----CTTEEEEECCGGGCCCCTTCEEEEEEESCG
T ss_pred cCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc----cCCeEEEEcchhhCCCCCCCeEEEEEchhh
Confidence 3568999999999999999998777 99999999999999999876 25799999999873 446789999999999
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEccCCC----------CCCC-------------------------CCcccCH
Q 024021 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMFPISD----------HVGG-------------------------PPYKVSV 229 (274)
Q Consensus 185 ~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~----------~~~~-------------------------~~~~~~~ 229 (274)
++++ ....+++++.++|+|||.+++....... ...+ ..++.+.
T Consensus 119 ~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 196 (253)
T 3g5l_A 119 HYIA--SFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGEDVQKYHRTV 196 (253)
T ss_dssp GGCS--CHHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETTEEEEEECCCH
T ss_pred hhhh--hHHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeeccccCccEecCH
Confidence 9995 3468999999999999999987543210 0000 0112288
Q ss_pred HHHHHHHhcCCCcEEEEeecccccC
Q 024021 230 SDYEEVLQPMGFQAISIVDNKLAIG 254 (274)
Q Consensus 230 ~~~~~~l~~~Gf~~~~~~~~~~~~~ 254 (274)
+++.++|+++||+++.+.+...+..
T Consensus 197 ~~~~~~l~~aGF~~~~~~e~~~~~~ 221 (253)
T 3g5l_A 197 TTYIQTLLKNGFQINSVIEPEPAPE 221 (253)
T ss_dssp HHHHHHHHHTTEEEEEEECCCCCGG
T ss_pred HHHHHHHHHcCCeeeeeecCCCchh
Confidence 9999999999999999987654433
No 38
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.80 E-value=1.6e-18 Score=146.47 Aligned_cols=149 Identities=15% Similarity=0.155 Sum_probs=121.8
Q ss_pred cHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCC
Q 024021 95 APIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTEL 174 (274)
Q Consensus 95 ~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 174 (274)
...+...+.. .++.+|||+|||+|.++..+++.+.+|+|+|+++.+++.++++....+. +++++.+|+.+....++
T Consensus 109 ~~~~~~~~~~--~~~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~ 184 (286)
T 3m70_A 109 HGDVVDAAKI--ISPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKENL--NISTALYDINAANIQEN 184 (286)
T ss_dssp CHHHHHHHHH--SCSCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCGGGCCCCSC
T ss_pred HHHHHHHhhc--cCCCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHcCC--ceEEEEeccccccccCC
Confidence 3445555543 3678999999999999999999899999999999999999999887764 79999999988655788
Q ss_pred eeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCC---CCCcccCHHHHHHHHhcCCCcEEEEeec
Q 024021 175 FDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVG---GPPYKVSVSDYEEVLQPMGFQAISIVDN 249 (274)
Q Consensus 175 ~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 249 (274)
||+|++..++++++++....+++.+.++|+|||.+++.......... ...+.++.+++.++++. |+++.....
T Consensus 185 fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~ 260 (286)
T 3m70_A 185 YDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCPLPFSFTFAENELKEYYKD--WEFLEYNEN 260 (286)
T ss_dssp EEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCSSCCSCCBCTTHHHHHTTT--SEEEEEECC
T ss_pred ccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCCCCccccCCHHHHHHHhcC--CEEEEEEcc
Confidence 99999999999998888889999999999999997776544332211 22455788999999975 998887654
No 39
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.80 E-value=3.6e-19 Score=146.76 Aligned_cols=135 Identities=18% Similarity=0.145 Sum_probs=113.5
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC---CCCCCCeeEEEeccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT---WCPTELFDLIFDYTF 183 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~D~v~~~~~ 183 (274)
.++.+|||+|||+|.++..+++.+.+|+|+|+++.+++.++++ ++++.+|+.+ ..+.++||+|++..+
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~---------~~~~~~d~~~~~~~~~~~~fD~i~~~~~ 110 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFCEGK---------FNVVKSDAIEYLKSLPDKYLDGVMISHF 110 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHHHTT---------SEEECSCHHHHHHTSCTTCBSEEEEESC
T ss_pred cCCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHHHHHhh---------cceeeccHHHHhhhcCCCCeeEEEECCc
Confidence 3458999999999999999988888999999999999999865 6788888876 446689999999999
Q ss_pred ccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC--------CCCCCcccCHHHHHHHHhcCCCcEEEEeecc
Q 024021 184 FCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH--------VGGPPYKVSVSDYEEVLQPMGFQAISIVDNK 250 (274)
Q Consensus 184 ~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 250 (274)
+++++++....+++++.++|+|||++++........ ..+....++.+++.++++++||+++.+....
T Consensus 111 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~ 185 (240)
T 3dli_A 111 VEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDVKIEFFE 185 (240)
T ss_dssp GGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEEEEEEEC
T ss_pred hhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEEEEEEec
Confidence 999987778899999999999999999987654321 1122344688999999999999999887754
No 40
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.80 E-value=3.7e-19 Score=146.68 Aligned_cols=152 Identities=18% Similarity=0.105 Sum_probs=119.9
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCe
Q 024021 96 PIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELF 175 (274)
Q Consensus 96 ~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 175 (274)
..+..++.....++.+|||+|||+|..+..+++.+.+++++|+++.+++.++++....+. +++++.+|+.+....++|
T Consensus 25 ~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~f 102 (246)
T 1y8c_A 25 DFIIEKCVENNLVFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGL--KPRLACQDISNLNINRKF 102 (246)
T ss_dssp HHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTC--CCEEECCCGGGCCCSCCE
T ss_pred HHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHHhhcCC--CeEEEecccccCCccCCc
Confidence 345555554334678999999999999999998888999999999999999999876643 699999999885444889
Q ss_pred eEEEecc-cccccC-hhHHHHHHHHHHhcccCCcEEEEEEccCCCC----------------------------------
Q 024021 176 DLIFDYT-FFCAIE-PEMRAAWAQKIKDFLKPDGELITLMFPISDH---------------------------------- 219 (274)
Q Consensus 176 D~v~~~~-~~~~~~-~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~---------------------------------- 219 (274)
|+|++.. ++++++ ++....+++++.++|+|||.+++........
T Consensus 103 D~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (246)
T 1y8c_A 103 DLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINSYYKLSQVLGNNDFNYDDDEVFYYWENQFEDDLVSMYIS 182 (246)
T ss_dssp EEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHTTTTTCCEEEEETTEEEEEEEEEETTEEEEEEE
T ss_pred eEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecCHHHHHhhcCcceEEecCCcEEEEEecccCCceEEEEEE
Confidence 9999998 999984 3667899999999999999999854422100
Q ss_pred ----CCC---------CCcccCHHHHHHHHhcCCCcEEEEeec
Q 024021 220 ----VGG---------PPYKVSVSDYEEVLQPMGFQAISIVDN 249 (274)
Q Consensus 220 ----~~~---------~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 249 (274)
..+ ....++.+++.++++++||+++.+...
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~ 225 (246)
T 1y8c_A 183 FFVRDGEFYKRFDEEHEERAYKEEDIEKYLKHGQLNILDKVDC 225 (246)
T ss_dssp EEEECSSSEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEES
T ss_pred EEEecCCcccccEEEEEEEcCCHHHHHHHHHHCCCeEEEEEcc
Confidence 000 012358999999999999999988653
No 41
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.80 E-value=1.1e-19 Score=147.16 Aligned_cols=149 Identities=16% Similarity=0.103 Sum_probs=117.5
Q ss_pred HHHHhcCCCCCCeEEEEcCCcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCCCCee
Q 024021 99 VHLHQSGALPKGRALVPGCGTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPTELFD 176 (274)
Q Consensus 99 ~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D 176 (274)
..++.....++.+|||+|||+|..+..+++ .+.+++++|+++.+++.|+++....+..++++++.+|+.+ ..+.++||
T Consensus 34 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 113 (219)
T 3dlc_A 34 ENIINRFGITAGTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYAD 113 (219)
T ss_dssp HHHHHHHCCCEEEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEE
T ss_pred HHHHHhcCCCCCEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCccccc
Confidence 334443344445999999999999999988 4779999999999999999999887776789999999988 45567899
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC-----------C-C-------CCCcccCHHHHHHHHh
Q 024021 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH-----------V-G-------GPPYKVSVSDYEEVLQ 237 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~-----------~-~-------~~~~~~~~~~~~~~l~ 237 (274)
+|++..++++++ ....+++++.++|+|||.+++........ . . ......+.+++.++++
T Consensus 114 ~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 191 (219)
T 3dlc_A 114 LIVSRGSVFFWE--DVATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLD 191 (219)
T ss_dssp EEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHH
T ss_pred EEEECchHhhcc--CHHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHH
Confidence 999999999984 34679999999999999999876332210 0 0 0011236799999999
Q ss_pred cCCCcEEEEeec
Q 024021 238 PMGFQAISIVDN 249 (274)
Q Consensus 238 ~~Gf~~~~~~~~ 249 (274)
++||+.+++...
T Consensus 192 ~aGf~~v~~~~~ 203 (219)
T 3dlc_A 192 EIGISSYEIILG 203 (219)
T ss_dssp HHTCSSEEEEEE
T ss_pred HcCCCeEEEEec
Confidence 999999887653
No 42
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.79 E-value=1.7e-18 Score=143.91 Aligned_cols=152 Identities=14% Similarity=0.069 Sum_probs=120.2
Q ss_pred HHHHHHHhcC--CCCCCeEEEEcCCcchhHHHhhCCC-CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-CC
Q 024021 96 PIIVHLHQSG--ALPKGRALVPGCGTGYDVVAMASPE-RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-CP 171 (274)
Q Consensus 96 ~~~~~~~~~~--~~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~~ 171 (274)
.....++... ..++.+|||+|||+|..+..+++.+ .+|+|+|+++.+++.++++....+..++++++.+|+.+. .+
T Consensus 32 ~~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 111 (257)
T 3f4k_A 32 EATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQ 111 (257)
T ss_dssp HHHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSC
T ss_pred HHHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCC
Confidence 3344455543 2345799999999999999998854 499999999999999999998888777899999999873 45
Q ss_pred CCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCC----------CCCcccCHHHHHHHHhcCCC
Q 024021 172 TELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVG----------GPPYKVSVSDYEEVLQPMGF 241 (274)
Q Consensus 172 ~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~l~~~Gf 241 (274)
.++||+|++..++++++ ...+++.+.++|+|||++++.+........ ..+...+.+++.++++++||
T Consensus 112 ~~~fD~v~~~~~l~~~~---~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 188 (257)
T 3f4k_A 112 NEELDLIWSEGAIYNIG---FERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGY 188 (257)
T ss_dssp TTCEEEEEEESCSCCCC---HHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTE
T ss_pred CCCEEEEEecChHhhcC---HHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCC
Confidence 68899999999999984 357899999999999999998743211100 01123478999999999999
Q ss_pred cEEEEeecc
Q 024021 242 QAISIVDNK 250 (274)
Q Consensus 242 ~~~~~~~~~ 250 (274)
+++......
T Consensus 189 ~~v~~~~~~ 197 (257)
T 3f4k_A 189 TPTAHFILP 197 (257)
T ss_dssp EEEEEEECC
T ss_pred eEEEEEECC
Confidence 999976644
No 43
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.79 E-value=7.2e-19 Score=143.09 Aligned_cols=135 Identities=19% Similarity=0.232 Sum_probs=107.9
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-----CCCCCeeEEEec
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-----CPTELFDLIFDY 181 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~D~v~~~ 181 (274)
.++.+|||+|||+|.++..+++.+.+++++|+++.+++.++++ .++.+..+|+.+. .+..+||+|++.
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~ 123 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADRGIEAVGVDGDRTLVDAARAA-------GAGEVHLASYAQLAEAKVPVGKDYDLICAN 123 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHT-------CSSCEEECCHHHHHTTCSCCCCCEEEEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHCCCEEEEEcCCHHHHHHHHHh-------cccccchhhHHhhcccccccCCCccEEEEC
Confidence 4468999999999999999999899999999999999999987 2467788777653 334569999999
Q ss_pred ccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCC---------------------CCcccCHHHHHHHHhcCC
Q 024021 182 TFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGG---------------------PPYKVSVSDYEEVLQPMG 240 (274)
Q Consensus 182 ~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~l~~~G 240 (274)
.+++ .+ ....+++.+.++|+|||++++..+.......+ ..+..+.+++.++++++|
T Consensus 124 ~~l~-~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 200 (227)
T 3e8s_A 124 FALL-HQ--DIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAG 200 (227)
T ss_dssp SCCC-SS--CCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTT
T ss_pred chhh-hh--hHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcC
Confidence 9998 43 34578999999999999999988754322111 012248999999999999
Q ss_pred CcEEEEeeccc
Q 024021 241 FQAISIVDNKL 251 (274)
Q Consensus 241 f~~~~~~~~~~ 251 (274)
|+++.+.....
T Consensus 201 f~~~~~~~~~~ 211 (227)
T 3e8s_A 201 LRLVSLQEPQH 211 (227)
T ss_dssp EEEEEEECCCC
T ss_pred CeEEEEecCCC
Confidence 99999887443
No 44
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.79 E-value=1.6e-18 Score=143.25 Aligned_cols=140 Identities=19% Similarity=0.158 Sum_probs=113.6
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCC------CCeeEEEe
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPT------ELFDLIFD 180 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~------~~~D~v~~ 180 (274)
.++.+|||+|||+|.++..+++.+.+|+++|+++.+++.++++... .+++++.+|+.+.... ..||+|++
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~ 130 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKENTA----ANISYRLLDGLVPEQAAQIHSEIGDANIYM 130 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHSCC----TTEEEEECCTTCHHHHHHHHHHHCSCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhCcc----cCceEEECcccccccccccccccCccEEEE
Confidence 4567999999999999999998777999999999999999998732 3699999999873221 24899999
Q ss_pred cccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC----------------------CCCCCcccCHHHHHHHHhc
Q 024021 181 YTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH----------------------VGGPPYKVSVSDYEEVLQP 238 (274)
Q Consensus 181 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~l~~ 238 (274)
..++++++++....+++++.++|+|||++++.++...+. ....+..++.+++.+++
T Consensus 131 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 208 (245)
T 3ggd_A 131 RTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGCIDFFNSLLEKYGQLPYELLLVMEHGIRPGIFTAEDIELYF-- 208 (245)
T ss_dssp ESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTHHHHHHHHHHHHSSCCHHHHHHHTTTCCCCCCCHHHHHHHC--
T ss_pred cchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccccHHHHHHHhCCCCCchhhhhccccCCCCCccCHHHHHHHh--
Confidence 999999987778899999999999999999888754321 01112336889999999
Q ss_pred CCCcEEEEeecccc
Q 024021 239 MGFQAISIVDNKLA 252 (274)
Q Consensus 239 ~Gf~~~~~~~~~~~ 252 (274)
+||+++........
T Consensus 209 aGf~~~~~~~~~~~ 222 (245)
T 3ggd_A 209 PDFEILSQGEGLFQ 222 (245)
T ss_dssp TTEEEEEEECCBCC
T ss_pred CCCEEEeccccccc
Confidence 89999987765443
No 45
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.78 E-value=3.3e-18 Score=149.52 Aligned_cols=140 Identities=14% Similarity=0.122 Sum_probs=118.4
Q ss_pred CCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC--CCCCeeEEEeccc
Q 024021 108 PKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC--PTELFDLIFDYTF 183 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~D~v~~~~~ 183 (274)
...+|||||||+|..+..+++ ++.+++++|+ +.+++.|+++....+..++++++.+|+.+.. .+++||+|++..+
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~~v 257 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWMSQF 257 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEEESC
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEEech
Confidence 457999999999999999987 7789999999 9999999999988777678999999999852 2378999999999
Q ss_pred ccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCC-------------------CCCCcccCHHHHHHHHhcCCCcEE
Q 024021 184 FCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHV-------------------GGPPYKVSVSDYEEVLQPMGFQAI 244 (274)
Q Consensus 184 ~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~l~~~Gf~~~ 244 (274)
+++++++....+++++.++|+|||++++.+....... .+.....+.+++.++++++||+++
T Consensus 258 lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AGf~~v 337 (363)
T 3dp7_A 258 LDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAGLEVE 337 (363)
T ss_dssp STTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTEEES
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcCCeEE
Confidence 9999988888999999999999999999886544321 111223489999999999999998
Q ss_pred EEee
Q 024021 245 SIVD 248 (274)
Q Consensus 245 ~~~~ 248 (274)
++..
T Consensus 338 ~~~~ 341 (363)
T 3dp7_A 338 EIQD 341 (363)
T ss_dssp CCCC
T ss_pred EEEe
Confidence 7764
No 46
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.78 E-value=1.9e-18 Score=139.17 Aligned_cols=142 Identities=20% Similarity=0.182 Sum_probs=114.3
Q ss_pred CCCCeEEEEcCCcchhH-HHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-CCCCCeeEEEecccc
Q 024021 107 LPKGRALVPGCGTGYDV-VAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-CPTELFDLIFDYTFF 184 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~-~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~~ 184 (274)
.++.+|||+|||+|..+ ..++..+.+++++|+++.+++.++++....+ .+++++.+|+.+. .+.++||+|++..++
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 99 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENN--FKLNISKGDIRKLPFKDESMSFVYSYGTI 99 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHT--CCCCEEECCTTSCCSCTTCEEEEEECSCG
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEECchhhCCCCCCceeEEEEcChH
Confidence 45689999999999984 4556688899999999999999999876544 4689999999884 446789999999999
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCC----------------CCC---cccCHHHHHHHHhcCCCcEEE
Q 024021 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVG----------------GPP---YKVSVSDYEEVLQPMGFQAIS 245 (274)
Q Consensus 185 ~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~----------------~~~---~~~~~~~~~~~l~~~Gf~~~~ 245 (274)
++++.+....+++++.++|+|||.+++..+...+... +.+ ..++.+++.++++..||....
T Consensus 100 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~~~~~ 179 (209)
T 2p8j_A 100 FHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKDMKVLFKE 179 (209)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTTSEEEEEE
T ss_pred HhCCHHHHHHHHHHHHHHcCCCcEEEEEEecccchhccchhhhccccceeccCCCceeEEecCHHHHHHHHhhcCceeee
Confidence 9998778889999999999999999998876543211 111 245889999999999988776
Q ss_pred Eeecc
Q 024021 246 IVDNK 250 (274)
Q Consensus 246 ~~~~~ 250 (274)
.....
T Consensus 180 ~~~~~ 184 (209)
T 2p8j_A 180 DRVVE 184 (209)
T ss_dssp EEEEE
T ss_pred eeeee
Confidence 55433
No 47
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.78 E-value=5.8e-18 Score=146.24 Aligned_cols=143 Identities=17% Similarity=0.180 Sum_probs=119.2
Q ss_pred CCCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFF 184 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~ 184 (274)
.++.+|||+|||+|..+..+++ ++.+++++|++ .+++.|+++....+..+++++..+|+.+...++.||+|++..++
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~~~~~l 242 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGNDYDLVLLPNFL 242 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSCEEEEEEESCG
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCCCCcEEEEcchh
Confidence 4557999999999999999887 47799999999 99999999987766667899999999874434459999999999
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCC----------------CCcccCHHHHHHHHhcCCCcEEEEee
Q 024021 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGG----------------PPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 185 ~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~l~~~Gf~~~~~~~ 248 (274)
++++++....+++++.++|+|||++++.++........ .....+.+++.++++++||+.+++..
T Consensus 243 ~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~~~~~ 322 (335)
T 2r3s_A 243 HHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHSQLHS 322 (335)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEEEEEC
T ss_pred ccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCeeeEEE
Confidence 99988888899999999999999999988765432111 12235799999999999999998866
Q ss_pred cc
Q 024021 249 NK 250 (274)
Q Consensus 249 ~~ 250 (274)
..
T Consensus 323 ~~ 324 (335)
T 2r3s_A 323 LP 324 (335)
T ss_dssp CT
T ss_pred CC
Confidence 43
No 48
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.78 E-value=1.1e-18 Score=145.51 Aligned_cols=177 Identities=14% Similarity=0.102 Sum_probs=126.9
Q ss_pred ccchhHhhhcCCCCccCCC----ccHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHH
Q 024021 75 SGGWEKCWEEGLTPWDIGQ----PAPIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEEL 149 (274)
Q Consensus 75 ~~~w~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~ 149 (274)
..+|+.+|......+.... +...+..++.....++.+|||+|||+|..+..++..+. +|+++|+++.+++.++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~ 98 (265)
T 2i62_A 19 RDYLEKYYSFGSRHCAENEILRHLLKNLFKIFCLGAVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKW 98 (265)
T ss_dssp HHHHHHHHCCCSSCHHHHHHHHHHHHHHHHHHHSSSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHhCcCCcchhHHHHHHhhHHHHHHHhcccccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHH
Confidence 3578888865443321100 01122234443234567999999999999999988777 999999999999999998
Q ss_pred hhcCCC----------------------------Ccce-EEEEcccCCCC--CC---CCeeEEEecccccccCh--hHHH
Q 024021 150 SSSLPN----------------------------AKFV-SFLKADFFTWC--PT---ELFDLIFDYTFFCAIEP--EMRA 193 (274)
Q Consensus 150 ~~~~~~----------------------------~~~~-~~~~~d~~~~~--~~---~~~D~v~~~~~~~~~~~--~~~~ 193 (274)
....+. ..++ +++.+|+.+.. +. ++||+|++..+++++++ +...
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~ 178 (265)
T 2i62_A 99 LKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYR 178 (265)
T ss_dssp HTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHH
T ss_pred HhcCCccccchhhhhhhhcccccccchHHHHHHhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHH
Confidence 765421 0127 89999998743 34 68999999999996543 3678
Q ss_pred HHHHHHHhcccCCcEEEEEEccCCCC--CCC---CCcccCHHHHHHHHhcCCCcEEEEeeccc
Q 024021 194 AWAQKIKDFLKPDGELITLMFPISDH--VGG---PPYKVSVSDYEEVLQPMGFQAISIVDNKL 251 (274)
Q Consensus 194 ~~l~~~~~~L~pgG~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 251 (274)
.++.++.++|+|||.+++........ ... ....++.+++.++++++||+++.+.....
T Consensus 179 ~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~ 241 (265)
T 2i62_A 179 TALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKFSSLPLGWETVRDAVEEAGYTIEQFEVISQ 241 (265)
T ss_dssp HHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTCEEEEEEEECC
T ss_pred HHHHHHHhhCCCCcEEEEEecCCCceEEcCCccccccccCHHHHHHHHHHCCCEEEEEEEecc
Confidence 89999999999999999877433211 000 12335788999999999999999887653
No 49
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.78 E-value=7.6e-18 Score=145.47 Aligned_cols=140 Identities=12% Similarity=0.054 Sum_probs=117.5
Q ss_pred CCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccccc
Q 024021 109 KGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFCA 186 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~ 186 (274)
..+|||+|||+|..+..+++ ++.+++++|+ +.+++.|+++....+..++++|..+|+....+. +||+|++.+++++
T Consensus 170 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p~-~~D~v~~~~vlh~ 247 (332)
T 3i53_A 170 LGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPA-GAGGYVLSAVLHD 247 (332)
T ss_dssp GSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCC-SCSEEEEESCGGG
T ss_pred CCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCCCCC-CCcEEEEehhhcc
Confidence 47999999999999999987 6779999999 999999999988877778899999999865444 8999999999999
Q ss_pred cChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCC-----------CCcccCHHHHHHHHhcCCCcEEEEeecc
Q 024021 187 IEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGG-----------PPYKVSVSDYEEVLQPMGFQAISIVDNK 250 (274)
Q Consensus 187 ~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 250 (274)
++++....++++++++|+|||++++.+....+.... .....+.+++.++++++||+++++....
T Consensus 248 ~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~ 322 (332)
T 3i53_A 248 WDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAAHPIS 322 (332)
T ss_dssp SCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEEEECS
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEEEECC
Confidence 998878899999999999999999988755432000 0112478999999999999999887643
No 50
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.78 E-value=8.2e-18 Score=133.50 Aligned_cols=130 Identities=19% Similarity=0.208 Sum_probs=111.8
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCCCCeeEEEec-cc
Q 024021 106 ALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPTELFDLIFDY-TF 183 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~v~~~-~~ 183 (274)
..++.+|||+|||+|..+..+++.+.+++++|+++.+++.++++. .+++++.+|+.+ ..+.++||+|++. .+
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~~D~i~~~~~~ 117 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQDF------PEARWVVGDLSVDQISETDFDLIVSAGNV 117 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHC------TTSEEEECCTTTSCCCCCCEEEEEECCCC
T ss_pred ccCCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHHhC------CCCcEEEcccccCCCCCCceeEEEECCcH
Confidence 346789999999999999999988889999999999999999886 358899999987 3445789999998 78
Q ss_pred ccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeec
Q 024021 184 FCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDN 249 (274)
Q Consensus 184 ~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 249 (274)
+++++.+....+++.+.++|+|||.+++...... ..+.+++.++++++||.++.....
T Consensus 118 ~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~--------~~~~~~~~~~l~~~Gf~~~~~~~~ 175 (195)
T 3cgg_A 118 MGFLAEDGREPALANIHRALGADGRAVIGFGAGR--------GWVFGDFLEVAERVGLELENAFES 175 (195)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETTS--------SCCHHHHHHHHHHHTEEEEEEESS
T ss_pred HhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCCC--------CcCHHHHHHHHHHcCCEEeeeecc
Confidence 8888777788999999999999999998764332 247899999999999999887654
No 51
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.77 E-value=2.5e-18 Score=134.07 Aligned_cols=132 Identities=22% Similarity=0.304 Sum_probs=111.3
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFCA 186 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~ 186 (274)
.++.+|||+|||+|.++..+++.+.+++++|+++.+++.++++. +++++..+| ...+.++||+|++..++++
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~------~~v~~~~~d--~~~~~~~~D~v~~~~~l~~ 87 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEKF------DSVITLSDP--KEIPDNSVDFILFANSFHD 87 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHHHC------TTSEEESSG--GGSCTTCEEEEEEESCSTT
T ss_pred CCCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHHHHhC------CCcEEEeCC--CCCCCCceEEEEEccchhc
Confidence 45679999999999999999987679999999999999999982 579999999 4455678999999999999
Q ss_pred cChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCc--ccCHHHHHHHHhcCCCcEEEEeecc
Q 024021 187 IEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPY--KVSVSDYEEVLQPMGFQAISIVDNK 250 (274)
Q Consensus 187 ~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~Gf~~~~~~~~~ 250 (274)
+++ ...+++++.++|+|||.+++.++.......+++. .++.+++.++++ ||+++......
T Consensus 88 ~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~~~~ 149 (170)
T 3i9f_A 88 MDD--KQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRFNPT 149 (170)
T ss_dssp CSC--HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEECSS
T ss_pred ccC--HHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEccCCC
Confidence 853 4688999999999999999998876655444333 368999999999 99999887654
No 52
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.77 E-value=5.2e-18 Score=143.87 Aligned_cols=148 Identities=18% Similarity=0.182 Sum_probs=118.5
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-C-CCCCeeEEEecc
Q 024021 106 ALPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-C-PTELFDLIFDYT 182 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~-~~~~~D~v~~~~ 182 (274)
..++.+|||+|||+|..+..+++.+. +++|+|+++.+++.|+++....+...+++++.+|+.+. . +.++||+|++..
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 141 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQF 141 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEES
T ss_pred CCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECc
Confidence 35668999999999999988887555 99999999999999999998776656899999999873 3 467899999999
Q ss_pred cccc--cChhHHHHHHHHHHhcccCCcEEEEEEccCCC-------------------------CC-CCC-----------
Q 024021 183 FFCA--IEPEMRAAWAQKIKDFLKPDGELITLMFPISD-------------------------HV-GGP----------- 223 (274)
Q Consensus 183 ~~~~--~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~-------------------------~~-~~~----------- 223 (274)
++++ .+.+....+++.+.++|+|||.+++....... .. .+.
T Consensus 142 ~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~ 221 (298)
T 1ri5_A 142 SFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSVN 221 (298)
T ss_dssp CGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSCS
T ss_pred hhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHccCccCCeeEEEEeCccccccccccceEEEEEchhhc
Confidence 9987 45567789999999999999999987654210 00 000
Q ss_pred ---CcccCHHHHHHHHhcCCCcEEEEeeccccc
Q 024021 224 ---PYKVSVSDYEEVLQPMGFQAISIVDNKLAI 253 (274)
Q Consensus 224 ---~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~ 253 (274)
...++.+++.++++++||+++........+
T Consensus 222 ~~~~~~~~~~~l~~ll~~aGf~~v~~~~~~~~~ 254 (298)
T 1ri5_A 222 NCIEYFVDFTRMVDGFKRLGLSLVERKGFIDFY 254 (298)
T ss_dssp SEEEECCCHHHHHHHHHTTTEEEEEEEEHHHHH
T ss_pred CCcccccCHHHHHHHHHHcCCEEEEecCHHHHH
Confidence 123578999999999999999987755433
No 53
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.77 E-value=5.4e-18 Score=134.01 Aligned_cols=153 Identities=16% Similarity=0.107 Sum_probs=108.6
Q ss_pred cHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC--CCC
Q 024021 95 APIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW--CPT 172 (274)
Q Consensus 95 ~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~ 172 (274)
......++.....++.+|||+|||+|..+..+++.+.+|+|+|+++.+++.|+++....+. ++++++..|.... .++
T Consensus 9 ~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~~~~~l~~~~~ 87 (185)
T 3mti_A 9 IHMSHDFLAEVLDDESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLSDLGI-ENTELILDGHENLDHYVR 87 (185)
T ss_dssp HHHHHHHHHTTCCTTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHHTC-CCEEEEESCGGGGGGTCC
T ss_pred HHHHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCcHHHHHhhcc
Confidence 3445556655556678999999999999999999888999999999999999999987666 6799999777662 346
Q ss_pred CCeeEEEeccccccc-------ChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEE
Q 024021 173 ELFDLIFDYTFFCAI-------EPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAIS 245 (274)
Q Consensus 173 ~~~D~v~~~~~~~~~-------~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 245 (274)
++||+|+++..+... ..+....+++++.++|+|||.+++..+..... +........++.+.+...+|.+..
T Consensus 88 ~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~ 165 (185)
T 3mti_A 88 EPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDG--GDMEKDAVLEYVIGLDQRVFTAML 165 (185)
T ss_dssp SCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC--------CHHHHHHHHHHHHSCTTTEEEEE
T ss_pred CCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCC--CHHHHHHHHHHHHhCCCceEEEEE
Confidence 789999987322111 22455678899999999999999988754321 111111234445555566788877
Q ss_pred Eeecc
Q 024021 246 IVDNK 250 (274)
Q Consensus 246 ~~~~~ 250 (274)
.....
T Consensus 166 ~~~~~ 170 (185)
T 3mti_A 166 YQPLN 170 (185)
T ss_dssp EEESS
T ss_pred ehhhc
Confidence 76644
No 54
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.77 E-value=1.5e-17 Score=145.75 Aligned_cols=139 Identities=20% Similarity=0.196 Sum_probs=118.0
Q ss_pred CCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccccc
Q 024021 108 PKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFC 185 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~ 185 (274)
+..+|||+|||+|..+..+++ ++.+++++|+ +.+++.|+++....++.++++|..+|+....+. .||+|++..+++
T Consensus 202 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p~-~~D~v~~~~vlh 279 (369)
T 3gwz_A 202 GAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFETIPD-GADVYLIKHVLH 279 (369)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTCCCS-SCSEEEEESCGG
T ss_pred cCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCCCCC-CceEEEhhhhhc
Confidence 347999999999999999987 5779999999 999999999988877778899999999865544 899999999999
Q ss_pred ccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCC-------------CCcccCHHHHHHHHhcCCCcEEEEee
Q 024021 186 AIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGG-------------PPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 186 ~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~l~~~Gf~~~~~~~ 248 (274)
+++++....+++++.++|+|||++++.+....+.... .....+.+++.++++++||+++++..
T Consensus 280 ~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~ 355 (369)
T 3gwz_A 280 DWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLRVERSLP 355 (369)
T ss_dssp GSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeEEEEEE
Confidence 9998877889999999999999999988655432110 01125789999999999999999866
No 55
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.77 E-value=7e-18 Score=142.58 Aligned_cols=135 Identities=20% Similarity=0.232 Sum_probs=110.5
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC---CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASP---ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTF 183 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~ 183 (274)
.++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.|+++....+ .+++++.+|+.+...+++||+|++..+
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~fD~v~~~~~ 98 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLP--YDSEFLEGDATEIELNDKYDIAICHAF 98 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSS--SEEEEEESCTTTCCCSSCEEEEEEESC
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEEcchhhcCcCCCeeEEEECCh
Confidence 35689999999999999999884 5799999999999999999987665 379999999998655678999999999
Q ss_pred ccccChhHHHHHHHHHHhcccCCcEEEEEEcc-----CC---CC---------------------CCCCCcccCHHHHHH
Q 024021 184 FCAIEPEMRAAWAQKIKDFLKPDGELITLMFP-----IS---DH---------------------VGGPPYKVSVSDYEE 234 (274)
Q Consensus 184 ~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~-----~~---~~---------------------~~~~~~~~~~~~~~~ 234 (274)
++++++. ..+++++.++|+|||++++.+.. .. +. ..+.. .....++.+
T Consensus 99 l~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~ 175 (284)
T 3gu3_A 99 LLHMTTP--ETMLQKMIHSVKKGGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQRNGKD-GNIGMKIPI 175 (284)
T ss_dssp GGGCSSH--HHHHHHHHHTEEEEEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHHHHHTCCC-TTGGGTHHH
T ss_pred hhcCCCH--HHHHHHHHHHcCCCCEEEEEecchhcccccceecCcchhhccchHHHHHHHHHHhhhhccc-ccHHHHHHH
Confidence 9999643 58999999999999999988765 11 00 00111 124678999
Q ss_pred HHhcCCCcEEEE
Q 024021 235 VLQPMGFQAISI 246 (274)
Q Consensus 235 ~l~~~Gf~~~~~ 246 (274)
+|+++||..+..
T Consensus 176 ~l~~aGF~~v~~ 187 (284)
T 3gu3_A 176 YLSELGVKNIEC 187 (284)
T ss_dssp HHHHTTCEEEEE
T ss_pred HHHHcCCCeEEE
Confidence 999999999987
No 56
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.77 E-value=6.2e-18 Score=142.09 Aligned_cols=157 Identities=23% Similarity=0.313 Sum_probs=121.3
Q ss_pred HHHHHHHhcC--CCCCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CC
Q 024021 96 PIIVHLHQSG--ALPKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WC 170 (274)
Q Consensus 96 ~~~~~~~~~~--~~~~~~vLDiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~ 170 (274)
..+..++... ..++.+|||+|||+|.++..+++ ++.+++++|+++.+++.++++....+. .+++++.+|+.+ ..
T Consensus 23 ~~l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~~~ 101 (276)
T 3mgg_A 23 ETLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGI-KNVKFLQANIFSLPF 101 (276)
T ss_dssp CHHHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEECCGGGCCS
T ss_pred HHHHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-CCcEEEEcccccCCC
Confidence 3445555433 24568999999999999999987 378999999999999999999877665 369999999988 44
Q ss_pred CCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCC---C-----------------CCCcccCHH
Q 024021 171 PTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHV---G-----------------GPPYKVSVS 230 (274)
Q Consensus 171 ~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~---~-----------------~~~~~~~~~ 230 (274)
+.++||+|++..+++++++. ..+++.+.++|+|||.+++.+....... . ......+..
T Consensus 102 ~~~~fD~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (276)
T 3mgg_A 102 EDSSFDHIFVCFVLEHLQSP--EEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLVGR 179 (276)
T ss_dssp CTTCEEEEEEESCGGGCSCH--HHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHHHHTTCCTTGGG
T ss_pred CCCCeeEEEEechhhhcCCH--HHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHHHhcCCCcchHH
Confidence 56789999999999999654 4789999999999999999774321110 0 001113568
Q ss_pred HHHHHHhcCCCcEEEEeecccccCC
Q 024021 231 DYEEVLQPMGFQAISIVDNKLAIGP 255 (274)
Q Consensus 231 ~~~~~l~~~Gf~~~~~~~~~~~~~~ 255 (274)
++.++|+++||+++.+.....+...
T Consensus 180 ~l~~~l~~aGf~~v~~~~~~~~~~~ 204 (276)
T 3mgg_A 180 QIYPLLQESGFEKIRVEPRMVYIDS 204 (276)
T ss_dssp GHHHHHHHTTCEEEEEEEEEEEECT
T ss_pred HHHHHHHHCCCCeEEEeeEEEECCC
Confidence 9999999999999999876655443
No 57
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.77 E-value=7.7e-18 Score=146.55 Aligned_cols=137 Identities=11% Similarity=0.073 Sum_probs=117.1
Q ss_pred CCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC--CCCCeeEEEecccc
Q 024021 109 KGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC--PTELFDLIFDYTFF 184 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~D~v~~~~~~ 184 (274)
+.+|||+|||+|.++..+++ ++.+++++|+ +.+++.++++....+..++++++.+|+.+.. +++.||+|++..++
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vl 258 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDCL 258 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESCG
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEeccc
Confidence 57999999999999999987 5779999999 8899999999887777778999999999854 56779999999999
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCC----------------CCcccCHHHHHHHHhcCCCcEEEE
Q 024021 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGG----------------PPYKVSVSDYEEVLQPMGFQAISI 246 (274)
Q Consensus 185 ~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~l~~~Gf~~~~~ 246 (274)
++++++....+++++.++|+|||++++.+....+.... .....+.+++.++++++||++++.
T Consensus 259 h~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 336 (352)
T 3mcz_A 259 HYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAVGER 336 (352)
T ss_dssp GGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred ccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCceeee
Confidence 99998888899999999999999999988654433211 122357999999999999999884
No 58
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.77 E-value=9.7e-18 Score=139.42 Aligned_cols=162 Identities=20% Similarity=0.222 Sum_probs=119.3
Q ss_pred HHHHHHhcCC-CCCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCC
Q 024021 97 IIVHLHQSGA-LPKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTE 173 (274)
Q Consensus 97 ~~~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 173 (274)
....++.... .++.+|||+|||+|.++..+++. +.+++++|+++.+++.++++. .+++++.+|+.+..+.+
T Consensus 21 ~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~ 94 (259)
T 2p35_A 21 PARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL------PNTNFGKADLATWKPAQ 94 (259)
T ss_dssp HHHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS------TTSEEEECCTTTCCCSS
T ss_pred HHHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC------CCcEEEECChhhcCccC
Confidence 3445555543 34579999999999999999874 889999999999999999883 46899999998855677
Q ss_pred CeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC------------------C----CCCCcccCHHH
Q 024021 174 LFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH------------------V----GGPPYKVSVSD 231 (274)
Q Consensus 174 ~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~------------------~----~~~~~~~~~~~ 231 (274)
+||+|+++.++++++ +...++.++.++|+|||.+++........ . .......+.++
T Consensus 95 ~fD~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (259)
T 2p35_A 95 KADLLYANAVFQWVP--DHLAVLSQLMDQLESGGVLAVQMPDNLQEPTHIAMHETADGGPWKDAFSGGGLRRKPLPPPSD 172 (259)
T ss_dssp CEEEEEEESCGGGST--THHHHHHHHGGGEEEEEEEEEEEECCTTSHHHHHHHHHHHHSTTGGGC-------CCCCCHHH
T ss_pred CcCEEEEeCchhhCC--CHHHHHHHHHHhcCCCeEEEEEeCCCCCcHHHHHHHHHhcCcchHHHhccccccccCCCCHHH
Confidence 899999999999995 34678999999999999999987543211 0 11223458999
Q ss_pred HHHHHhcCCCcEEEEeecccccCCccchhHHHHhhhh
Q 024021 232 YEEVLQPMGFQAISIVDNKLAIGPRKGREKLGRWKRS 268 (274)
Q Consensus 232 ~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (274)
+.++|+++||.+..... .... ...+.+.+..|.+.
T Consensus 173 ~~~~l~~aGf~v~~~~~-~~~~-~~~~~~~~~~~l~~ 207 (259)
T 2p35_A 173 YFNALSPKSSRVDVWHT-VYNH-PMKDADSIVEWVKG 207 (259)
T ss_dssp HHHHHGGGEEEEEEEEE-EEEE-EESCHHHHHHHHTT
T ss_pred HHHHHHhcCCceEEEEE-Eeee-ccCCchHHhhhhhc
Confidence 99999999997543322 1111 12234555555543
No 59
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.76 E-value=7.2e-18 Score=142.80 Aligned_cols=154 Identities=14% Similarity=0.137 Sum_probs=110.1
Q ss_pred HHHHHhcCCCCCCeEEEEcCCcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCC-----------------C---
Q 024021 98 IVHLHQSGALPKGRALVPGCGTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPN-----------------A--- 156 (274)
Q Consensus 98 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~-----------------~--- 156 (274)
+...+.....++.+|||+|||+|.....++. .+.+|+|+|+|+.+++.|++++..... .
T Consensus 61 l~~~l~~~~~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 140 (289)
T 2g72_A 61 LAQTFATGEVSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECW 140 (289)
T ss_dssp HHHHHHTSCSCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCH
T ss_pred HHHHhCCCCCCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccch
Confidence 3344433234668999999999995544444 467999999999999999986543210 0
Q ss_pred ---------cceEEEEcccCCC-------CCCCCeeEEEecccccccCh--hHHHHHHHHHHhcccCCcEEEEEEccCCC
Q 024021 157 ---------KFVSFLKADFFTW-------CPTELFDLIFDYTFFCAIEP--EMRAAWAQKIKDFLKPDGELITLMFPISD 218 (274)
Q Consensus 157 ---------~~~~~~~~d~~~~-------~~~~~~D~v~~~~~~~~~~~--~~~~~~l~~~~~~L~pgG~~~~~~~~~~~ 218 (274)
..++++.+|+.+. .++++||+|+++.+++++++ +....++.++.++|+|||++++.......
T Consensus 141 ~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~ 220 (289)
T 2g72_A 141 QDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEES 220 (289)
T ss_dssp HHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCC
T ss_pred hhhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcc
Confidence 0156777788762 22356999999999998653 36788999999999999999986432211
Q ss_pred C--CCC---CCcccCHHHHHHHHhcCCCcEEEEeeccc
Q 024021 219 H--VGG---PPYKVSVSDYEEVLQPMGFQAISIVDNKL 251 (274)
Q Consensus 219 ~--~~~---~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 251 (274)
. ... ....++.+++.++|+++||+++.+.....
T Consensus 221 ~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~~ 258 (289)
T 2g72_A 221 WYLAGEARLTVVPVSEEEVREALVRSGYKVRDLRTYIM 258 (289)
T ss_dssp EEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEEEC
T ss_pred eEEcCCeeeeeccCCHHHHHHHHHHcCCeEEEeeEeec
Confidence 0 001 12346899999999999999999877653
No 60
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.76 E-value=2.7e-18 Score=141.34 Aligned_cols=138 Identities=20% Similarity=0.242 Sum_probs=111.5
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-CCCCCeeEEEecccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-CPTELFDLIFDYTFF 184 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~~ 184 (274)
.++.+|||+|||+|..+..+++.+. +++++|+++.+++.++++... .+++++.+|+.+. .+.++||+|++..++
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 117 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD----TGITYERADLDKLHLPQDSFDLAYSSLAL 117 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS----SSEEEEECCGGGCCCCTTCEEEEEEESCG
T ss_pred cCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc----CCceEEEcChhhccCCCCCceEEEEeccc
Confidence 4568999999999999999988887 999999999999999988754 3699999999874 446789999999999
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEccCCC---CC-------------------------------CCCCcccCHH
Q 024021 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMFPISD---HV-------------------------------GGPPYKVSVS 230 (274)
Q Consensus 185 ~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~---~~-------------------------------~~~~~~~~~~ 230 (274)
+++++ ...+++++.++|+|||.+++....... .. ....++.+.+
T Consensus 118 ~~~~~--~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 195 (243)
T 3bkw_A 118 HYVED--VARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKGVVKHHRTVG 195 (243)
T ss_dssp GGCSC--HHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHSCCEEECCHH
T ss_pred cccch--HHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccCceEEEeccHH
Confidence 99853 468899999999999999987643210 00 0011224789
Q ss_pred HHHHHHhcCCCcEEEEeecc
Q 024021 231 DYEEVLQPMGFQAISIVDNK 250 (274)
Q Consensus 231 ~~~~~l~~~Gf~~~~~~~~~ 250 (274)
++.++++++||+++.+....
T Consensus 196 ~~~~~l~~aGF~~~~~~~~~ 215 (243)
T 3bkw_A 196 TTLNALIRSGFAIEHVEEFC 215 (243)
T ss_dssp HHHHHHHHTTCEEEEEEECC
T ss_pred HHHHHHHHcCCEeeeeccCC
Confidence 99999999999999987643
No 61
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.76 E-value=3e-18 Score=143.01 Aligned_cols=140 Identities=16% Similarity=0.090 Sum_probs=112.7
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCCCCeeEEEeccccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPTELFDLIFDYTFFC 185 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~v~~~~~~~ 185 (274)
.++.+|||+|||+|.++..+++++.+|+|+|+++.+++.++++. +++++.+|+.+ +.+.++||+|++..+++
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~-------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 105 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQAVVHP-------QVEWFTGYAENLALPDKSVDGVISILAIH 105 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSSCCCT-------TEEEECCCTTSCCSCTTCBSEEEEESCGG
T ss_pred CCCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHHHHHhcc-------CCEEEECchhhCCCCCCCEeEEEEcchHh
Confidence 45689999999999999999999999999999999988776543 69999999988 44568999999999999
Q ss_pred ccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCC-------------CcccCHHHHHHHHhcCCCcEEEEeecccc
Q 024021 186 AIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGP-------------PYKVSVSDYEEVLQPMGFQAISIVDNKLA 252 (274)
Q Consensus 186 ~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~ 252 (274)
+++ +...+++++.++|+ ||++++.++......... ....+.+++. +++++||..+.+.....+
T Consensus 106 ~~~--~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~aGF~~v~~~~~~~p 181 (261)
T 3ege_A 106 HFS--HLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFLWEDALRFLPLDEQIN-LLQENTKRRVEAIPFLLP 181 (261)
T ss_dssp GCS--SHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHHHHHHHTSCCHHHHHH-HHHHHHCSEEEEEECCEE
T ss_pred hcc--CHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHHhhhhhhhCCCHHHHH-HHHHcCCCceeEEEecCC
Confidence 995 44688999999999 998888877543221100 1123567788 999999999999887776
Q ss_pred cCCcc
Q 024021 253 IGPRK 257 (274)
Q Consensus 253 ~~~~~ 257 (274)
....+
T Consensus 182 ~~~~~ 186 (261)
T 3ege_A 182 HDLSD 186 (261)
T ss_dssp TTCSB
T ss_pred CcCcc
Confidence 66543
No 62
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.75 E-value=1.5e-17 Score=135.43 Aligned_cols=142 Identities=24% Similarity=0.281 Sum_probs=111.3
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-CCCCCeeEEEeccccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-CPTELFDLIFDYTFFC 185 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~~~ 185 (274)
.++.+|||+|||+|..+..+++.+.+++++|+++.+++.|+++....+ .+++++.+|+.+. .+.++||+|+++.+++
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~ 114 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAKSRE--SNVEFIVGDARKLSFEDKTFDYVIFIDSIV 114 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCTTSCCSCTTCEEEEEEESCGG
T ss_pred CCCCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC--CCceEEECchhcCCCCCCcEEEEEEcCchH
Confidence 346899999999999999998887899999999999999999987665 5799999999883 4557899999999966
Q ss_pred ccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC--------CCCCCc-----------------------------ccC
Q 024021 186 AIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH--------VGGPPY-----------------------------KVS 228 (274)
Q Consensus 186 ~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~--------~~~~~~-----------------------------~~~ 228 (274)
+.+......+++.+.++|+|||.+++........ ..+..+ ..-
T Consensus 115 ~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 194 (227)
T 1ve3_A 115 HFEPLELNQVFKEVRRVLKPSGKFIMYFTDLRELLPRLKESLVVGQKYWISKVIPDQEERTVVIEFKSEQDSFRVRFNVW 194 (227)
T ss_dssp GCCHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHGGGCCC---------CCEEEEETTTTEEEEEC-----CCEEEEECC
T ss_pred hCCHHHHHHHHHHHHHHcCCCcEEEEEecChHHHHHHHHhhhhcccceeecccccCccccEEEEEeccchhhheeehhhh
Confidence 6665677889999999999999999876541100 000000 000
Q ss_pred HHHHHHHHhcCCCcEEEEeecc
Q 024021 229 VSDYEEVLQPMGFQAISIVDNK 250 (274)
Q Consensus 229 ~~~~~~~l~~~Gf~~~~~~~~~ 250 (274)
..++.++++++||..+++....
T Consensus 195 ~~~~~~~l~~~GF~~v~~~~~~ 216 (227)
T 1ve3_A 195 GKTGVELLAKLYFTKEAEEKVG 216 (227)
T ss_dssp CHHHHHHHHTTTEEEEEEEEET
T ss_pred chHHHHHHHHHhhhHHHHHHhC
Confidence 1578999999999999887743
No 63
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.75 E-value=4.2e-18 Score=144.52 Aligned_cols=143 Identities=19% Similarity=0.259 Sum_probs=108.3
Q ss_pred CCCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCC----------------------------
Q 024021 107 LPKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNA---------------------------- 156 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~---------------------------- 156 (274)
.++.+|||+|||+|.++..+++ .+.+|+|+|+++.+++.|+++....+..
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 3568999999999999999987 3679999999999999999987654321
Q ss_pred -----------------------------cceEEEEcccCCCC------CCCCeeEEEeccccccc----ChhHHHHHHH
Q 024021 157 -----------------------------KFVSFLKADFFTWC------PTELFDLIFDYTFFCAI----EPEMRAAWAQ 197 (274)
Q Consensus 157 -----------------------------~~~~~~~~d~~~~~------~~~~~D~v~~~~~~~~~----~~~~~~~~l~ 197 (274)
.+++|+.+|+.... ..++||+|++..+++++ +++....+++
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~ 204 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFR 204 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHH
Confidence 57999999998633 56789999999999777 4457788999
Q ss_pred HHHhcccCCcEEEEEEccCCC--CCCCC---------CcccCHHHHHHHHhc--CCCcEEEEeec
Q 024021 198 KIKDFLKPDGELITLMFPISD--HVGGP---------PYKVSVSDYEEVLQP--MGFQAISIVDN 249 (274)
Q Consensus 198 ~~~~~L~pgG~~~~~~~~~~~--~~~~~---------~~~~~~~~~~~~l~~--~Gf~~~~~~~~ 249 (274)
++.++|+|||++++....... ..... ...+.++++.++|.+ +||..+++...
T Consensus 205 ~~~~~LkpGG~lil~~~~~~~y~~~~~~~~~~~~~~~~~~~~p~~~~~~L~~~~~GF~~~~~~~~ 269 (292)
T 3g07_A 205 RIYRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNYYRIQLKPEQFSSYLTSPDVGFSSYELVAT 269 (292)
T ss_dssp HHHHHEEEEEEEEEECCCHHHHHTTTTSCHHHHHHHHHCCCCGGGHHHHHTSTTTCCCEEEEC--
T ss_pred HHHHHhCCCcEEEEecCCchhhhhhhcccHHHHhhhhcEEEcHHHHHHHHHhcCCCceEEEEecc
Confidence 999999999999986432110 00000 112468899999999 99998877653
No 64
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.75 E-value=1.6e-17 Score=136.40 Aligned_cols=112 Identities=18% Similarity=0.224 Sum_probs=92.2
Q ss_pred HHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeE
Q 024021 98 IVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDL 177 (274)
Q Consensus 98 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~ 177 (274)
+..++.....++.+|||+|||+|..+..+++.+.+++++|+++.+++.++++. .+++++.+|+.+....++||+
T Consensus 30 ~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~D~ 103 (239)
T 3bxo_A 30 IADLVRSRTPEASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARKRL------PDATLHQGDMRDFRLGRKFSA 103 (239)
T ss_dssp HHHHHHHHCTTCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHHHC------TTCEEEECCTTTCCCSSCEEE
T ss_pred HHHHHHHhcCCCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhC------CCCEEEECCHHHcccCCCCcE
Confidence 33444332355689999999999999999887779999999999999999885 358999999988555678999
Q ss_pred EEe-cccccccCh-hHHHHHHHHHHhcccCCcEEEEEEcc
Q 024021 178 IFD-YTFFCAIEP-EMRAAWAQKIKDFLKPDGELITLMFP 215 (274)
Q Consensus 178 v~~-~~~~~~~~~-~~~~~~l~~~~~~L~pgG~~~~~~~~ 215 (274)
|++ ..++++++. +....+++++.++|+|||.+++..+.
T Consensus 104 v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 143 (239)
T 3bxo_A 104 VVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWW 143 (239)
T ss_dssp EEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCC
T ss_pred EEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecc
Confidence 995 458888853 56788999999999999999987643
No 65
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.75 E-value=1.7e-17 Score=133.86 Aligned_cols=153 Identities=14% Similarity=0.193 Sum_probs=116.7
Q ss_pred cccchhHhhhcCCC--CccCCCccHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHh
Q 024021 74 SSGGWEKCWEEGLT--PWDIGQPAPIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELS 150 (274)
Q Consensus 74 ~~~~w~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~ 150 (274)
...+|+..|..... .+........+..++.....++.+|||+|||+|.++..+++.+. +++++|+++.+++.++++.
T Consensus 6 ~~~~W~~~y~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~ 85 (215)
T 2pxx_A 6 EVEYWDQRYQGAADSAPYDWFGDFSSFRALLEPELRPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACY 85 (215)
T ss_dssp CHHHHHHHTTTTTTSCCCCTTCCHHHHHHHHGGGCCTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHT
T ss_pred chhHHHHHhccCCCCCCcccccCHHHHHHHHHHhcCCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhc
Confidence 34789999987652 12222234446666655456678999999999999999988776 8999999999999999987
Q ss_pred hcCCCCcceEEEEcccCC-CCCCCCeeEEEecccccccC-------------hhHHHHHHHHHHhcccCCcEEEEEEccC
Q 024021 151 SSLPNAKFVSFLKADFFT-WCPTELFDLIFDYTFFCAIE-------------PEMRAAWAQKIKDFLKPDGELITLMFPI 216 (274)
Q Consensus 151 ~~~~~~~~~~~~~~d~~~-~~~~~~~D~v~~~~~~~~~~-------------~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 216 (274)
... ++++++.+|+.+ ..+.++||+|++..+++++. ......+++++.++|+|||.+++..+..
T Consensus 86 ~~~---~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 86 AHV---PQLRWETMDVRKLDFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp TTC---TTCEEEECCTTSCCSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred ccC---CCcEEEEcchhcCCCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 642 479999999988 44557899999998887764 3456789999999999999999988533
Q ss_pred CCCCCCCCcccCHHHHHHHHhcCCC
Q 024021 217 SDHVGGPPYKVSVSDYEEVLQPMGF 241 (274)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~l~~~Gf 241 (274)
......++...|+
T Consensus 163 ------------~~~~~~~~~~~~~ 175 (215)
T 2pxx_A 163 ------------PHFRTRHYAQAYY 175 (215)
T ss_dssp ------------HHHHHHHHCCGGG
T ss_pred ------------cHHHHHHHhcccc
Confidence 2334456666665
No 66
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.75 E-value=1.6e-17 Score=143.54 Aligned_cols=149 Identities=17% Similarity=0.154 Sum_probs=119.2
Q ss_pred HHHHhcCCCCCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCee
Q 024021 99 VHLHQSGALPKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFD 176 (274)
Q Consensus 99 ~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D 176 (274)
..++.....++.+|||+|||+|..+..+++ ++.+++++|+ +.+++.|+++....+..++++++.+|+.+..+ ++||
T Consensus 158 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~D 235 (334)
T 2ip2_A 158 HEIPRLLDFRGRSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQEVP-SNGD 235 (334)
T ss_dssp HHHHHHSCCTTCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTTCCC-SSCS
T ss_pred HHHHHhCCCCCCEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCCCCC-CCCC
Confidence 334443333338999999999999999887 5779999999 99999999987665555689999999988544 6799
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCC--------------CCcccCHHHHHHHHhcCCCc
Q 024021 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGG--------------PPYKVSVSDYEEVLQPMGFQ 242 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~l~~~Gf~ 242 (274)
+|++..++++++++....+++++.++|+|||++++.+....+.... .....+.+++.++++++||+
T Consensus 236 ~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~ 315 (334)
T 2ip2_A 236 IYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFA 315 (334)
T ss_dssp EEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEE
T ss_pred EEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCc
Confidence 9999999999988877899999999999999999988654332110 01224789999999999999
Q ss_pred EEEEeec
Q 024021 243 AISIVDN 249 (274)
Q Consensus 243 ~~~~~~~ 249 (274)
++++...
T Consensus 316 ~~~~~~~ 322 (334)
T 2ip2_A 316 VERIVDL 322 (334)
T ss_dssp EEEEEEE
T ss_pred eeEEEEC
Confidence 9888653
No 67
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.75 E-value=6e-17 Score=141.32 Aligned_cols=150 Identities=18% Similarity=0.184 Sum_probs=120.0
Q ss_pred HHHHhcCC-CCCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCe
Q 024021 99 VHLHQSGA-LPKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELF 175 (274)
Q Consensus 99 ~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 175 (274)
..++.... .++.+|||+|||+|..+..+++ ++.+++++|+ +.+++.|+++....+..++++++.+|+.+...+ .+
T Consensus 180 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~ 257 (359)
T 1x19_A 180 QLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYP-EA 257 (359)
T ss_dssp HHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCC-CC
T ss_pred HHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCC-CC
Confidence 34444433 3457999999999999999987 5779999999 999999999988777667899999999875332 34
Q ss_pred eEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCC---------------C--CCcccCHHHHHHHHhc
Q 024021 176 DLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVG---------------G--PPYKVSVSDYEEVLQP 238 (274)
Q Consensus 176 D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~---------------~--~~~~~~~~~~~~~l~~ 238 (274)
|+|++..++++++++....+++++.++|+|||++++.++...+... + .....+.+++.+++++
T Consensus 258 D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll~~ 337 (359)
T 1x19_A 258 DAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYKEILES 337 (359)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHHHH
T ss_pred CEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHHHHHHH
Confidence 9999999999998877889999999999999999888765433200 1 0111689999999999
Q ss_pred CCCcEEEEeecc
Q 024021 239 MGFQAISIVDNK 250 (274)
Q Consensus 239 ~Gf~~~~~~~~~ 250 (274)
+||+++++....
T Consensus 338 aGf~~v~~~~~~ 349 (359)
T 1x19_A 338 LGYKDVTMVRKY 349 (359)
T ss_dssp HTCEEEEEEEET
T ss_pred CCCceEEEEecC
Confidence 999998887643
No 68
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.75 E-value=1.9e-17 Score=137.83 Aligned_cols=140 Identities=15% Similarity=0.147 Sum_probs=111.2
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-CCCCCeeEEEeccccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-CPTELFDLIFDYTFFC 185 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~~~ 185 (274)
.++.+|||+|||+|.++..+++.+.+++|+|+++.+++.++++.. ....+++++.+|+.+. .+.++||+|++..+++
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~--~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 115 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKIA--GVDRKVQVVQADARAIPLPDESVHGVIVVHLWH 115 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHTT--TSCTTEEEEESCTTSCCSCTTCEEEEEEESCGG
T ss_pred CCCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh--ccCCceEEEEcccccCCCCCCCeeEEEECCchh
Confidence 456799999999999999999988999999999999999999972 2236799999999874 4567899999999999
Q ss_pred ccChhHHHHHHHHHHhcccCCcEEEEEEccCCC-CC--------------CCC-----CcccCHHHHHHHHhcCCCcEEE
Q 024021 186 AIEPEMRAAWAQKIKDFLKPDGELITLMFPISD-HV--------------GGP-----PYKVSVSDYEEVLQPMGFQAIS 245 (274)
Q Consensus 186 ~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~-~~--------------~~~-----~~~~~~~~~~~~l~~~Gf~~~~ 245 (274)
++++ ...+++++.++|+|||.+++. +...+ .. .+. ....+.+++.++++++||.++.
T Consensus 116 ~~~~--~~~~l~~~~~~L~pgG~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 192 (263)
T 2yqz_A 116 LVPD--WPKVLAEAIRVLKPGGALLEG-WDQAEASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRLGLKPRT 192 (263)
T ss_dssp GCTT--HHHHHHHHHHHEEEEEEEEEE-EEEECCCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHTTCCCEE
T ss_pred hcCC--HHHHHHHHHHHCCCCcEEEEE-ecCCCccHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHHcCCCcce
Confidence 9863 467899999999999999887 32221 00 011 1235688999999999999877
Q ss_pred Eeeccc
Q 024021 246 IVDNKL 251 (274)
Q Consensus 246 ~~~~~~ 251 (274)
......
T Consensus 193 ~~~~~~ 198 (263)
T 2yqz_A 193 REVARW 198 (263)
T ss_dssp EEEEEE
T ss_pred EEEeee
Confidence 654433
No 69
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.75 E-value=1.7e-17 Score=134.33 Aligned_cols=128 Identities=17% Similarity=0.185 Sum_probs=102.9
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFCA 186 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~ 186 (274)
.++.+|||+|||+|.++..+++.+.+|+++|+++.+++.++++.... ++++++.+|+.+..+.++||+|++..++++
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~ 126 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKRW---SHISWAATDILQFSTAELFDLIVVAEVLYY 126 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTTTC---SSEEEEECCTTTCCCSCCEEEEEEESCGGG
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhcccC---CCeEEEEcchhhCCCCCCccEEEEccHHHh
Confidence 34579999999999999999998889999999999999999998765 379999999998767789999999999999
Q ss_pred cCh-hHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhc
Q 024021 187 IEP-EMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQP 238 (274)
Q Consensus 187 ~~~-~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 238 (274)
+++ +....+++++.++|+|||.+++........... ......+.+..++..
T Consensus 127 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 178 (216)
T 3ofk_A 127 LEDMTQMRTAIDNMVKMLAPGGHLVFGSARDATCRRW-GHVAGAETVITILTE 178 (216)
T ss_dssp SSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHT-TCSCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEEEecCCCcchhh-hhhhhHHHHHHHHHh
Confidence 974 566788999999999999999876433211000 012345666666654
No 70
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.75 E-value=2.2e-17 Score=135.91 Aligned_cols=140 Identities=19% Similarity=0.220 Sum_probs=112.3
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecc-ccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYT-FFC 185 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~-~~~ 185 (274)
.++.+|||+|||+|..+..+++. .+++++|+++.+++.|+++....+ .+++++.+|+.+....++||+|++.. +++
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~-~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~~~~fD~v~~~~~~~~ 108 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADH-YEVTGVDLSEEMLEIAQEKAMETN--RHVDFWVQDMRELELPEPVDAITILCDSLN 108 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT-SEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCGGGCCCSSCEEEEEECTTGGG
T ss_pred CCCCeEEEecCCCCHHHHHHhhC-CeEEEEECCHHHHHHHHHhhhhcC--CceEEEEcChhhcCCCCCcCEEEEeCCchh
Confidence 44689999999999999999888 899999999999999999987654 46999999998855457899999986 888
Q ss_pred cc-ChhHHHHHHHHHHhcccCCcEEEEEEccCC--------------------------CC---------------CCC-
Q 024021 186 AI-EPEMRAAWAQKIKDFLKPDGELITLMFPIS--------------------------DH---------------VGG- 222 (274)
Q Consensus 186 ~~-~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~--------------------------~~---------------~~~- 222 (274)
++ +.+....+++.+.++|+|||.+++...... .. ..+
T Consensus 109 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (243)
T 3d2l_A 109 YLQTEADVKQTFDSAARLLTDGGKLLFDVHSPYKMETLFNGKTYATHAEQSSYIWFADPGEEPLSVVHELTFFIEGEDGR 188 (243)
T ss_dssp GCCSHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHHTTTSSEEEEEECSSEEEEEEEEECSSTTEEEEEEEEEEECTTSC
T ss_pred hcCCHHHHHHHHHHHHHhcCCCeEEEEEcCCHHHHHHhcCCcceeEECCCcEEEEEeecCccccEEEEEEEEEEEcCCCc
Confidence 88 456778899999999999999988442210 00 000
Q ss_pred --------CCcccCHHHHHHHHhcCCCcEEEEeec
Q 024021 223 --------PPYKVSVSDYEEVLQPMGFQAISIVDN 249 (274)
Q Consensus 223 --------~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 249 (274)
....++.+++.++++++||+++.+...
T Consensus 189 ~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~ 223 (243)
T 3d2l_A 189 YDRVDETHHQRTYPPEQYITWLREAGFRVCAVTGD 223 (243)
T ss_dssp EEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEET
T ss_pred eEEEEEEEeEecCCHHHHHHHHHHCCCeEEEEecC
Confidence 002358999999999999999988653
No 71
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.74 E-value=2.6e-17 Score=139.47 Aligned_cols=117 Identities=19% Similarity=0.196 Sum_probs=95.5
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCC---CcceEEEEcccCCC---
Q 024021 96 PIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPN---AKFVSFLKADFFTW--- 169 (274)
Q Consensus 96 ~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~~~~~~~d~~~~--- 169 (274)
..+..++. ..++.+|||+|||+|.++..+++.+.+|+|+|+|+.+++.|+++...... ..++.+..+|+...
T Consensus 47 ~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 124 (293)
T 3thr_A 47 AWLLGLLR--QHGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKD 124 (293)
T ss_dssp HHHHHHHH--HTTCCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHH
T ss_pred HHHHHHhc--ccCCCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccc
Confidence 33444444 23568999999999999999999889999999999999999987633221 14688999998873
Q ss_pred -CCCCCeeEEEec-ccccccCh-----hHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 170 -CPTELFDLIFDY-TFFCAIEP-----EMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 170 -~~~~~~D~v~~~-~~~~~~~~-----~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
.+.++||+|++. .+++|+++ +....+++++.++|+|||++++...
T Consensus 125 ~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 125 VPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp SCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 467899999998 89999976 6678999999999999999998664
No 72
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.74 E-value=2.7e-17 Score=144.17 Aligned_cols=142 Identities=18% Similarity=0.108 Sum_probs=115.5
Q ss_pred CCCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFF 184 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~ 184 (274)
.++.+|||+|||+|..+..+++ ++.+++++|+ +.+++.|+++....+..++++++.+|+.+..+. .||+|++..++
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~D~v~~~~vl 258 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPLPV-TADVVLLSFVL 258 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSC-CEEEEEEESCG
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcCCC-CCCEEEEeccc
Confidence 3457999999999999999887 4679999999 999999999988777767899999999874443 49999999999
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEc--cCCCCCCC--------------CCcccCHHHHHHHHhcCCCcEEEEee
Q 024021 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMF--PISDHVGG--------------PPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 185 ~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~--~~~~~~~~--------------~~~~~~~~~~~~~l~~~Gf~~~~~~~ 248 (274)
++++++....+++++.++|+|||++++.+. ...+.... .....+.+++.++++++||+++.+..
T Consensus 259 ~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~~~ 338 (374)
T 1qzz_A 259 LNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLALASERT 338 (374)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEEEEEEE
T ss_pred cCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCceEEEEE
Confidence 999887777899999999999999999887 32211000 01224899999999999999998876
Q ss_pred cc
Q 024021 249 NK 250 (274)
Q Consensus 249 ~~ 250 (274)
..
T Consensus 339 ~~ 340 (374)
T 1qzz_A 339 SG 340 (374)
T ss_dssp EC
T ss_pred CC
Confidence 53
No 73
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.74 E-value=3.3e-17 Score=131.81 Aligned_cols=127 Identities=12% Similarity=0.027 Sum_probs=105.9
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCCCCeeEEEecccc
Q 024021 106 ALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPTELFDLIFDYTFF 184 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~v~~~~~~ 184 (274)
..++.+|||+|||+|.++..+++.+.+|+++|+++.+++.|+++....+..++++++.+|+.+ ....+.||+|++...+
T Consensus 53 ~~~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~~ 132 (204)
T 3njr_A 53 PRRGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGGGG 132 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECSCC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECCcc
Confidence 345689999999999999999888889999999999999999999887766589999999988 4444579999987743
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeec
Q 024021 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDN 249 (274)
Q Consensus 185 ~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 249 (274)
+ .. +++.+.++|+|||++++...... +..++.+++++.||++..+...
T Consensus 133 ---~---~~-~l~~~~~~LkpgG~lv~~~~~~~----------~~~~~~~~l~~~g~~i~~i~~~ 180 (204)
T 3njr_A 133 ---S---QA-LYDRLWEWLAPGTRIVANAVTLE----------SETLLTQLHARHGGQLLRIDIA 180 (204)
T ss_dssp ---C---HH-HHHHHHHHSCTTCEEEEEECSHH----------HHHHHHHHHHHHCSEEEEEEEE
T ss_pred ---c---HH-HHHHHHHhcCCCcEEEEEecCcc----------cHHHHHHHHHhCCCcEEEEEee
Confidence 1 23 88999999999999999774332 5778889999999998887553
No 74
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.74 E-value=7.2e-18 Score=140.22 Aligned_cols=108 Identities=16% Similarity=0.205 Sum_probs=89.8
Q ss_pred HHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCCCCeeE
Q 024021 99 VHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPTELFDL 177 (274)
Q Consensus 99 ~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~ 177 (274)
.+++........+|||+|||+|..+..+++.+.+|+|+|+|+.|++.|++. ++++++++|+.+ +.++++||+
T Consensus 30 ~~~l~~~~~~~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml~~a~~~-------~~v~~~~~~~e~~~~~~~sfD~ 102 (257)
T 4hg2_A 30 FRWLGEVAPARGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQIRQALRH-------PRVTYAVAPAEDTGLPPASVDV 102 (257)
T ss_dssp HHHHHHHSSCSSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHHHTCCCC-------TTEEEEECCTTCCCCCSSCEEE
T ss_pred HHHHHHhcCCCCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhhhhhhhc-------CCceeehhhhhhhcccCCcccE
Confidence 333333233457999999999999999999999999999999999877532 579999999988 556789999
Q ss_pred EEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccC
Q 024021 178 IFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPI 216 (274)
Q Consensus 178 v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 216 (274)
|++..++++++. ..++.++.++|||||.+++..+..
T Consensus 103 v~~~~~~h~~~~---~~~~~e~~rvLkpgG~l~~~~~~~ 138 (257)
T 4hg2_A 103 AIAAQAMHWFDL---DRFWAELRRVARPGAVFAAVTYGL 138 (257)
T ss_dssp EEECSCCTTCCH---HHHHHHHHHHEEEEEEEEEEEECC
T ss_pred EEEeeehhHhhH---HHHHHHHHHHcCCCCEEEEEECCC
Confidence 999999988864 468899999999999999887654
No 75
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.74 E-value=2.3e-16 Score=137.25 Aligned_cols=147 Identities=17% Similarity=0.167 Sum_probs=118.1
Q ss_pred HHHhcCCCC-CCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCee
Q 024021 100 HLHQSGALP-KGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFD 176 (274)
Q Consensus 100 ~~~~~~~~~-~~~vLDiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D 176 (274)
.++...+.+ ..+|+|+|||+|..+..+++ ++.+++..|. |.+++.|+++....+ .++++++.+|+++.. ...+|
T Consensus 170 ~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~-~~rv~~~~gD~~~~~-~~~~D 246 (353)
T 4a6d_A 170 SVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQE-EEQIDFQEGDFFKDP-LPEAD 246 (353)
T ss_dssp HHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC---CCSEEEEESCTTTSC-CCCCS
T ss_pred HHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcc-cCceeeecCccccCC-CCCce
Confidence 334433333 36999999999999999987 7779999997 899999999886543 578999999998753 34589
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCC---------------cccCHHHHHHHHhcCCC
Q 024021 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPP---------------YKVSVSDYEEVLQPMGF 241 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~l~~~Gf 241 (274)
+|++..++++++++....+++++++.|+|||++++.+....+...++. ...+.+++.++++++||
T Consensus 247 ~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf 326 (353)
T 4a6d_A 247 LYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGF 326 (353)
T ss_dssp EEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTC
T ss_pred EEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCC
Confidence 999999999999988889999999999999999999876544322221 12378999999999999
Q ss_pred cEEEEeec
Q 024021 242 QAISIVDN 249 (274)
Q Consensus 242 ~~~~~~~~ 249 (274)
+.+++...
T Consensus 327 ~~v~v~~~ 334 (353)
T 4a6d_A 327 RDFQFKKT 334 (353)
T ss_dssp EEEEEECC
T ss_pred ceEEEEEc
Confidence 99988653
No 76
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.74 E-value=2.6e-17 Score=138.16 Aligned_cols=141 Identities=13% Similarity=0.078 Sum_probs=113.0
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC-C--CeEEEEeCChH------HHHHHHHHhhcCCCCcceEEEEcc-cCC---CCCCC
Q 024021 107 LPKGRALVPGCGTGYDVVAMASP-E--RYVVGLEISDI------AIKKAEELSSSLPNAKFVSFLKAD-FFT---WCPTE 173 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~-~--~~v~~vD~~~~------~~~~a~~~~~~~~~~~~~~~~~~d-~~~---~~~~~ 173 (274)
.++.+|||+|||+|.++..+++. + .+|+|+|+++. +++.|+++....+..++++++.+| +.. +.+.+
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 121 (275)
T 3bkx_A 42 KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQ 121 (275)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCCCC
Confidence 45689999999999999999874 3 79999999997 999999998877766789999998 432 23567
Q ss_pred CeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC------------------------CCCCCcccCH
Q 024021 174 LFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH------------------------VGGPPYKVSV 229 (274)
Q Consensus 174 ~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~------------------------~~~~~~~~~~ 229 (274)
+||+|++..+++++++.. .+++.+..+++|||++++.++..... .......++.
T Consensus 122 ~fD~v~~~~~l~~~~~~~--~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 199 (275)
T 3bkx_A 122 HFDRVVLAHSLWYFASAN--ALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYAIAPSDVANIRTLITP 199 (275)
T ss_dssp CCSEEEEESCGGGSSCHH--HHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHHHSCCTTCSCCCCCCH
T ss_pred CEEEEEEccchhhCCCHH--HHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHHHHhhccccccccccccCCH
Confidence 899999999999997543 46777777778899999987655322 1112234689
Q ss_pred HHHHHHHhcCCCcEEEEeec
Q 024021 230 SDYEEVLQPMGFQAISIVDN 249 (274)
Q Consensus 230 ~~~~~~l~~~Gf~~~~~~~~ 249 (274)
+++.++++++||+++.....
T Consensus 200 ~~l~~~l~~aGf~~~~~~~~ 219 (275)
T 3bkx_A 200 DTLAQIAHDNTWTYTAGTIV 219 (275)
T ss_dssp HHHHHHHHHHTCEEEECCCB
T ss_pred HHHHHHHHHCCCeeEEEEEe
Confidence 99999999999999998876
No 77
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.74 E-value=2.1e-17 Score=145.43 Aligned_cols=139 Identities=20% Similarity=0.274 Sum_probs=110.9
Q ss_pred CCCeEEEEcCCcchhHHHhhC---CCCeEEEEeCChHHHHHHHHHhhcC-----C--CCcceEEEEcccCC-------CC
Q 024021 108 PKGRALVPGCGTGYDVVAMAS---PERYVVGLEISDIAIKKAEELSSSL-----P--NAKFVSFLKADFFT-------WC 170 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~-----~--~~~~~~~~~~d~~~-------~~ 170 (274)
++.+|||+|||+|.++..+++ ++.+|+|+|+++.+++.|+++.... + ...+++|+.+|+.+ ..
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~ 162 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGV 162 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCC
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCC
Confidence 567999999999999998876 5679999999999999999987532 1 12579999999987 34
Q ss_pred CCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCC------------CCCCcccCHHHHHHHHhc
Q 024021 171 PTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHV------------GGPPYKVSVSDYEEVLQP 238 (274)
Q Consensus 171 ~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~l~~ 238 (274)
+.++||+|+++.+++++++ ...+++++.++|+|||++++.+....... ......++.+++.+++++
T Consensus 163 ~~~~fD~V~~~~~l~~~~d--~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 240 (383)
T 4fsd_A 163 PDSSVDIVISNCVCNLSTN--KLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAE 240 (383)
T ss_dssp CTTCEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHH
T ss_pred CCCCEEEEEEccchhcCCC--HHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHH
Confidence 5678999999999999864 46899999999999999999775443210 011123467999999999
Q ss_pred CCCcEEEEee
Q 024021 239 MGFQAISIVD 248 (274)
Q Consensus 239 ~Gf~~~~~~~ 248 (274)
+||..+++..
T Consensus 241 aGF~~v~~~~ 250 (383)
T 4fsd_A 241 AGFRDVRLVS 250 (383)
T ss_dssp TTCCCEEEEE
T ss_pred CCCceEEEEe
Confidence 9999887655
No 78
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.74 E-value=1.8e-17 Score=133.15 Aligned_cols=127 Identities=19% Similarity=0.167 Sum_probs=107.0
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccc
Q 024021 106 ALPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFF 184 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~ 184 (274)
..++.+|||+|||+|..+..+++.+. +++++|+++.+++.|+++....+..+ +++..+|+.+.. .++||+|+++.++
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~-~~~fD~i~~~~~~ 135 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYD-IALQKTSLLADV-DGKFDLIVANILA 135 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCC-CEEEESSTTTTC-CSCEEEEEEESCH
T ss_pred ccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCc-eEEEeccccccC-CCCceEEEECCcH
Confidence 34568999999999999999888655 99999999999999999988776544 999999998754 4789999998776
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeec
Q 024021 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDN 249 (274)
Q Consensus 185 ~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 249 (274)
++ ...+++.+.++|+|||++++..+... +.+++.++++++||+++.....
T Consensus 136 ~~-----~~~~l~~~~~~L~~gG~l~~~~~~~~----------~~~~~~~~~~~~Gf~~~~~~~~ 185 (205)
T 3grz_A 136 EI-----LLDLIPQLDSHLNEDGQVIFSGIDYL----------QLPKIEQALAENSFQIDLKMRA 185 (205)
T ss_dssp HH-----HHHHGGGSGGGEEEEEEEEEEEEEGG----------GHHHHHHHHHHTTEEEEEEEEE
T ss_pred HH-----HHHHHHHHHHhcCCCCEEEEEecCcc----------cHHHHHHHHHHcCCceEEeecc
Confidence 54 36788999999999999999764432 5789999999999999887653
No 79
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.73 E-value=3.9e-17 Score=127.58 Aligned_cols=124 Identities=15% Similarity=0.139 Sum_probs=102.2
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFCA 186 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~ 186 (274)
.++.+|||+|||+|.++..+++.+ +|+|+|+++.+++. .++++++.+|+.+..+.++||+|+++.++..
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~-~v~gvD~s~~~~~~----------~~~~~~~~~d~~~~~~~~~fD~i~~n~~~~~ 90 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN-TVVSTDLNIRALES----------HRGGNLVRADLLCSINQESVDVVVFNPPYVP 90 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS-EEEEEESCHHHHHT----------CSSSCEEECSTTTTBCGGGCSEEEECCCCBT
T ss_pred CCCCeEEEeccCccHHHHHHHhcC-cEEEEECCHHHHhc----------ccCCeEEECChhhhcccCCCCEEEECCCCcc
Confidence 556799999999999999999988 99999999999987 1568999999988666689999999988875
Q ss_pred cChh-------HHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeecccc
Q 024021 187 IEPE-------MRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDNKLA 252 (274)
Q Consensus 187 ~~~~-------~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~ 252 (274)
.++. ....++.++.+.+ |||.+++..... ...+++.++++++||..+.+......
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~----------~~~~~l~~~l~~~gf~~~~~~~~~~~ 152 (170)
T 3q87_B 91 DTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA----------NRPKEVLARLEERGYGTRILKVRKIL 152 (170)
T ss_dssp TCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG----------GCHHHHHHHHHHTTCEEEEEEEEECS
T ss_pred CCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC----------CCHHHHHHHHHHCCCcEEEEEeeccC
Confidence 4322 2345778888888 999999877433 26789999999999999888775543
No 80
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.73 E-value=1.4e-16 Score=129.65 Aligned_cols=137 Identities=17% Similarity=0.118 Sum_probs=110.6
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC---CCCCCCeeEEEeccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT---WCPTELFDLIFDYTF 183 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~D~v~~~~~ 183 (274)
.++.+|||+|||+|..+..+++.+.+++++|+++.+++.++++. .++..+|+.+ ..+.++||+|++..+
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~--------~~~~~~d~~~~~~~~~~~~fD~v~~~~~ 102 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAKEKL--------DHVVLGDIETMDMPYEEEQFDCVIFGDV 102 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHHHHHHTTS--------SEEEESCTTTCCCCSCTTCEEEEEEESC
T ss_pred cCCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC--------CcEEEcchhhcCCCCCCCccCEEEECCh
Confidence 45689999999999999999887889999999999999998765 3678888875 234578999999999
Q ss_pred ccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC-------------------CCCCCcccCHHHHHHHHhcCCCcEE
Q 024021 184 FCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH-------------------VGGPPYKVSVSDYEEVLQPMGFQAI 244 (274)
Q Consensus 184 ~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~l~~~Gf~~~ 244 (274)
++++++. ..+++.+.++|+|||.+++........ .......++.+++.++++++||+++
T Consensus 103 l~~~~~~--~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 180 (230)
T 3cc8_A 103 LEHLFDP--WAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYSIS 180 (230)
T ss_dssp GGGSSCH--HHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEEEE
T ss_pred hhhcCCH--HHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCCeEE
Confidence 9998644 588999999999999999976542210 0111234689999999999999999
Q ss_pred EEeeccccc
Q 024021 245 SIVDNKLAI 253 (274)
Q Consensus 245 ~~~~~~~~~ 253 (274)
.+.......
T Consensus 181 ~~~~~~~~~ 189 (230)
T 3cc8_A 181 KVDRVYVDH 189 (230)
T ss_dssp EEEEEECCC
T ss_pred EEEecccCh
Confidence 988866554
No 81
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.73 E-value=5e-17 Score=141.82 Aligned_cols=142 Identities=15% Similarity=0.114 Sum_probs=116.8
Q ss_pred CCCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFF 184 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~ 184 (274)
.++.+|||+|||+|..+..+++ ++.+++++|+ +.+++.|+++....+..++++++.+|+.+..+. .||+|++..++
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~D~v~~~~vl 259 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPR-KADAIILSFVL 259 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCCSS-CEEEEEEESCG
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCCCC-CccEEEEcccc
Confidence 3457999999999999998887 4679999999 999999999988777667899999999874443 49999999999
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEcc-CCCCCCC--------------CCcccCHHHHHHHHhcCCCcEEEEeec
Q 024021 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMFP-ISDHVGG--------------PPYKVSVSDYEEVLQPMGFQAISIVDN 249 (274)
Q Consensus 185 ~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~-~~~~~~~--------------~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 249 (274)
++++++....+++++.++|+|||++++.++. ..+.... .....+.+++.++++++||+++++...
T Consensus 260 ~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~ 339 (360)
T 1tw3_A 260 LNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVEEVRQL 339 (360)
T ss_dssp GGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEEEE
T ss_pred cCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEEEEEeC
Confidence 9998877778999999999999999998866 3221100 012248899999999999999988765
Q ss_pred c
Q 024021 250 K 250 (274)
Q Consensus 250 ~ 250 (274)
.
T Consensus 340 ~ 340 (360)
T 1tw3_A 340 P 340 (360)
T ss_dssp E
T ss_pred C
Confidence 3
No 82
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.73 E-value=2.7e-18 Score=141.26 Aligned_cols=157 Identities=18% Similarity=0.127 Sum_probs=109.1
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCC-CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC---CCC
Q 024021 96 PIIVHLHQSGALPKGRALVPGCGTGYDVVAMASP-ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT---WCP 171 (274)
Q Consensus 96 ~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~---~~~ 171 (274)
+.+..+......++.+|||||||+|..+..+++. +.++++||+++.+++.|+++....+ .+++++.+|... ..+
T Consensus 48 ~~m~~~a~~~~~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~--~~~~~~~~~a~~~~~~~~ 125 (236)
T 3orh_A 48 PYMHALAAAASSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTLP 125 (236)
T ss_dssp HHHHHHHHHHTTTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGSC
T ss_pred HHHHHHHHhhccCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCC--CceEEEeehHHhhccccc
Confidence 3444444444567789999999999999999874 4589999999999999999987765 568889888765 456
Q ss_pred CCCeeEEEecccccc---cChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCc----ccCHHHHHHHHhcCCCcEE
Q 024021 172 TELFDLIFDYTFFCA---IEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPY----KVSVSDYEEVLQPMGFQAI 244 (274)
Q Consensus 172 ~~~~D~v~~~~~~~~---~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~Gf~~~ 244 (274)
.++||.|+...+... .+..+...+++++.++|||||++++.+...........+ ....+.+...|.++||+++
T Consensus 126 ~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~eaGF~~~ 205 (236)
T 3orh_A 126 DGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRRE 205 (236)
T ss_dssp TTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHHTCCGG
T ss_pred ccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEecCCchhhhhhhhhhhhhhhHHHHHHHHHHcCCeEE
Confidence 678999986433221 122456789999999999999988754221111001111 1234566677888999976
Q ss_pred EEeecccccC
Q 024021 245 SIVDNKLAIG 254 (274)
Q Consensus 245 ~~~~~~~~~~ 254 (274)
.+........
T Consensus 206 ~i~~~~~~l~ 215 (236)
T 3orh_A 206 NIRTEVMALV 215 (236)
T ss_dssp GEEEEEEECC
T ss_pred EEEEEeeccC
Confidence 6655444443
No 83
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.72 E-value=2e-16 Score=131.07 Aligned_cols=115 Identities=23% Similarity=0.322 Sum_probs=95.1
Q ss_pred HHHHHHhcCC-CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCe
Q 024021 97 IIVHLHQSGA-LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELF 175 (274)
Q Consensus 97 ~~~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 175 (274)
.+..++.... .++.+|||+|||+|..+..+++.+.+|+|+|+++.+++.|+++....+. +++++.+|+.+....++|
T Consensus 29 ~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~f 106 (252)
T 1wzn_A 29 FVEEIFKEDAKREVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKAKERNL--KIEFLQGDVLEIAFKNEF 106 (252)
T ss_dssp HHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CCEEEESCGGGCCCCSCE
T ss_pred HHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEECChhhcccCCCc
Confidence 3455555433 3557999999999999999998899999999999999999999876653 699999999886556789
Q ss_pred eEEEec-ccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024021 176 DLIFDY-TFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 176 D~v~~~-~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 213 (274)
|+|++. ..+.+++.+....+++.+.++|+|||.+++..
T Consensus 107 D~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 107 DAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp EEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEec
Confidence 999987 45566676778899999999999999988743
No 84
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.72 E-value=7.1e-17 Score=140.29 Aligned_cols=136 Identities=13% Similarity=0.125 Sum_probs=108.2
Q ss_pred CCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccccc
Q 024021 108 PKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFC 185 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~ 185 (274)
++.+|||+|||+|..+..+++ ++.+++++|+ +.++. +.+....+..++++++.+|++...+ +||+|++..+++
T Consensus 184 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~~~p--~~D~v~~~~vlh 258 (348)
T 3lst_A 184 ATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLREVP--HADVHVLKRILH 258 (348)
T ss_dssp SSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTTCCC--CCSEEEEESCGG
T ss_pred CCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCCCCC--CCcEEEEehhcc
Confidence 346999999999999999987 6678999999 55554 3333333445689999999986554 899999999999
Q ss_pred ccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCC--------------CCcccCHHHHHHHHhcCCCcEEEEee
Q 024021 186 AIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGG--------------PPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 186 ~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~l~~~Gf~~~~~~~ 248 (274)
+++++....++++++++|+|||++++.+....+.... .....+.+++.++++++||+++++..
T Consensus 259 ~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 335 (348)
T 3lst_A 259 NWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLRLDRVVG 335 (348)
T ss_dssp GSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCceEEEEE
Confidence 9998877899999999999999999988654432110 01124789999999999999999876
No 85
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.72 E-value=7.8e-17 Score=137.07 Aligned_cols=142 Identities=19% Similarity=0.187 Sum_probs=108.6
Q ss_pred HHHHHhcCCCCCCeEEEEcCCcchhHHHhh---CCCCeEEEEeCChHHHHHHHHHhhcC-CCCcceEEEEcccCC-CCCC
Q 024021 98 IVHLHQSGALPKGRALVPGCGTGYDVVAMA---SPERYVVGLEISDIAIKKAEELSSSL-PNAKFVSFLKADFFT-WCPT 172 (274)
Q Consensus 98 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~---~~~~~v~~vD~~~~~~~~a~~~~~~~-~~~~~~~~~~~d~~~-~~~~ 172 (274)
...+......++.+|||+|||+|..+..++ ..+.+|+|+|+++.+++.|+++.... +...+++++.+|+.+ ..+.
T Consensus 26 ~~~l~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 105 (299)
T 3g5t_A 26 YKMIDEYHDGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLG 105 (299)
T ss_dssp HHHHHHHCCSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGC
T ss_pred HHHHHHHhcCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccc
Confidence 333333334567899999999999999999 67889999999999999999998765 344689999999988 3333
Q ss_pred ------CCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCC---C-C--------------CCCCCcc-c
Q 024021 173 ------ELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPIS---D-H--------------VGGPPYK-V 227 (274)
Q Consensus 173 ------~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~---~-~--------------~~~~~~~-~ 227 (274)
++||+|++..+++++ +...+++++.++|+|||.+++..+... . . ..++.+. .
T Consensus 106 ~~~~~~~~fD~V~~~~~l~~~---~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~p 182 (299)
T 3g5t_A 106 ADSVDKQKIDMITAVECAHWF---DFEKFQRSAYANLRKDGTIAIWGYADPIFPDYPEFDDLMIEVPYGKQGLGPYWEQP 182 (299)
T ss_dssp TTTTTSSCEEEEEEESCGGGS---CHHHHHHHHHHHEEEEEEEEEEEEEEEECTTCGGGTTHHHHHHHCTTTTGGGSCTT
T ss_pred cccccCCCeeEEeHhhHHHHh---CHHHHHHHHHHhcCCCcEEEEEecCCccccCcHHHHHHHHHhccCcccccchhhch
Confidence 689999999999998 346889999999999999988554321 1 0 0111111 3
Q ss_pred CHHHHHHHHhcCCCc
Q 024021 228 SVSDYEEVLQPMGFQ 242 (274)
Q Consensus 228 ~~~~~~~~l~~~Gf~ 242 (274)
..+.+.++++..||.
T Consensus 183 ~~~~~~~~l~~~gfp 197 (299)
T 3g5t_A 183 GRSRLRNMLKDSHLD 197 (299)
T ss_dssp HHHHHHTTTTTCCCC
T ss_pred hhHHHHHhhhccCCC
Confidence 456789999999993
No 86
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.72 E-value=1.3e-16 Score=130.48 Aligned_cols=136 Identities=16% Similarity=0.082 Sum_probs=106.9
Q ss_pred HhcCCCCCCeEEEEcCC-cchhHHHhhCC-CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC--CCCCCCeeE
Q 024021 102 HQSGALPKGRALVPGCG-TGYDVVAMASP-ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT--WCPTELFDL 177 (274)
Q Consensus 102 ~~~~~~~~~~vLDiG~G-~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~D~ 177 (274)
+.....++.+|||+||| +|..+..+++. +.+|+|+|+++.+++.|+++....+. +++++.+|+.. ..+.++||+
T Consensus 49 ~~~~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~~fD~ 126 (230)
T 3evz_A 49 LKTFLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNS--NVRLVKSNGGIIKGVVEGTFDV 126 (230)
T ss_dssp HHTTCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTC--CCEEEECSSCSSTTTCCSCEEE
T ss_pred hHhhcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCC--CcEEEeCCchhhhhcccCceeE
Confidence 34444567899999999 99999999886 78999999999999999999988765 79999999643 344578999
Q ss_pred EEecccccccCh-----------------hHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCC
Q 024021 178 IFDYTFFCAIEP-----------------EMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMG 240 (274)
Q Consensus 178 v~~~~~~~~~~~-----------------~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 240 (274)
|+++.++...+. .....+++.+.++|+|||++++...... ...+++.++++++|
T Consensus 127 I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---------~~~~~~~~~l~~~g 197 (230)
T 3evz_A 127 IFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE---------KLLNVIKERGIKLG 197 (230)
T ss_dssp EEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH---------HHHHHHHHHHHHTT
T ss_pred EEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH---------hHHHHHHHHHHHcC
Confidence 999987765432 1236789999999999999998653211 24678999999999
Q ss_pred CcEEEEee
Q 024021 241 FQAISIVD 248 (274)
Q Consensus 241 f~~~~~~~ 248 (274)
|.+..+..
T Consensus 198 ~~~~~~~~ 205 (230)
T 3evz_A 198 YSVKDIKF 205 (230)
T ss_dssp CEEEEEEE
T ss_pred CceEEEEe
Confidence 98776644
No 87
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.72 E-value=4.4e-17 Score=138.72 Aligned_cols=143 Identities=15% Similarity=0.157 Sum_probs=105.9
Q ss_pred CCCeEEEEcCCcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCc-----ceEEEEcccCC---------CCCC
Q 024021 108 PKGRALVPGCGTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAK-----FVSFLKADFFT---------WCPT 172 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-----~~~~~~~d~~~---------~~~~ 172 (274)
++.+|||+|||+|..+..++. .+.+|+|+|+|+.+++.|+++....+... +++|...|+.. ..+.
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 357999999999987765554 45799999999999999999876543211 26788887732 2345
Q ss_pred CCeeEEEeccccccc-ChhHHHHHHHHHHhcccCCcEEEEEEccCCC-------------------C-------------
Q 024021 173 ELFDLIFDYTFFCAI-EPEMRAAWAQKIKDFLKPDGELITLMFPISD-------------------H------------- 219 (274)
Q Consensus 173 ~~~D~v~~~~~~~~~-~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~-------------------~------------- 219 (274)
++||+|+|..+++++ +.+....+++.+.++|+|||++++.+..... .
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 207 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYMSVEKIADDRI 207 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHHHHTTCCSCEEEECCSSSCTTTSEEEECEEETTEE
T ss_pred CCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHhcCCcccccccccccceeeecccccccc
Confidence 789999999999875 3334578999999999999999986653110 0
Q ss_pred ----CCC-----CCcccCHHHHHHHHhcCCCcEEEEeecc
Q 024021 220 ----VGG-----PPYKVSVSDYEEVLQPMGFQAISIVDNK 250 (274)
Q Consensus 220 ----~~~-----~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 250 (274)
..+ +.+..+++++.++++++||+++......
T Consensus 208 ~~~~~~~~~~~~~e~~v~~~el~~l~~~~Gl~lv~~~~f~ 247 (302)
T 2vdw_A 208 VVYNPSTMSTPMTEYIIKKNDIVRVFNEYGFVLVDNVDFA 247 (302)
T ss_dssp EEBCTTTBSSCEEEECCCHHHHHHHHHHTTEEEEEEEEHH
T ss_pred ceeeccccCCCceeeeeEHHHHHHHHHHCCCEEEEecChH
Confidence 000 1124567999999999999999987654
No 88
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.71 E-value=1e-17 Score=137.75 Aligned_cols=136 Identities=17% Similarity=0.091 Sum_probs=100.6
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC---CCCCCeeEEEe-
Q 024021 106 ALPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW---CPTELFDLIFD- 180 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~D~v~~- 180 (274)
..++.+|||+|||+|..+..+++.+. +|+++|+++.+++.|+++....+ .+++++.+|+.+. .++++||+|++
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~fD~V~~d 135 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTLPDGHFDGILYD 135 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGSCTTCEEEEEEC
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcC--CCeEEEecCHHHhhcccCCCceEEEEEC
Confidence 34568999999999999999988554 89999999999999999987665 5799999998763 45678999999
Q ss_pred cccc--cccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCc----ccCHHHHHHHHhcCCCcE
Q 024021 181 YTFF--CAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPY----KVSVSDYEEVLQPMGFQA 243 (274)
Q Consensus 181 ~~~~--~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~Gf~~ 243 (274)
...+ ...+......+++++.++|||||++++.++..........+ ....+.....+.++||..
T Consensus 136 ~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~ 204 (236)
T 1zx0_A 136 TYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRR 204 (236)
T ss_dssp CCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHTTCCG
T ss_pred CcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecCcHHHhhchhhhhhhhhccHHHHHHHHHCCCCC
Confidence 4443 22333455678999999999999999876442111000011 112355567788999985
No 89
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.71 E-value=2.1e-16 Score=126.91 Aligned_cols=128 Identities=12% Similarity=-0.006 Sum_probs=103.4
Q ss_pred HHHHhcC-CCCCCeEEEEcCCcchhHHHhhCCC--CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC-CCCC
Q 024021 99 VHLHQSG-ALPKGRALVPGCGTGYDVVAMASPE--RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC-PTEL 174 (274)
Q Consensus 99 ~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~ 174 (274)
..++... ..++.+|||+|||+|..+..+++.+ .+++++|+++.+++.|+++....+. ++++++.+|+.+.. ..++
T Consensus 30 ~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~ 108 (204)
T 3e05_A 30 AVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVA-RNVTLVEAFAPEGLDDLPD 108 (204)
T ss_dssp HHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTC-TTEEEEECCTTTTCTTSCC
T ss_pred HHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeCChhhhhhcCCC
Confidence 3334433 3456799999999999999998844 7999999999999999999877665 67999999997743 3367
Q ss_pred eeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCc
Q 024021 175 FDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQ 242 (274)
Q Consensus 175 ~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 242 (274)
||+|++..+++ ....+++.+.++|+|||++++..... .+.+++.++++++||.
T Consensus 109 ~D~i~~~~~~~-----~~~~~l~~~~~~LkpgG~l~~~~~~~----------~~~~~~~~~l~~~g~~ 161 (204)
T 3e05_A 109 PDRVFIGGSGG-----MLEEIIDAVDRRLKSEGVIVLNAVTL----------DTLTKAVEFLEDHGYM 161 (204)
T ss_dssp CSEEEESCCTT-----CHHHHHHHHHHHCCTTCEEEEEECBH----------HHHHHHHHHHHHTTCE
T ss_pred CCEEEECCCCc-----CHHHHHHHHHHhcCCCeEEEEEeccc----------ccHHHHHHHHHHCCCc
Confidence 99999988765 23578999999999999999976432 1578899999999993
No 90
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.71 E-value=1.1e-16 Score=125.39 Aligned_cols=125 Identities=15% Similarity=0.037 Sum_probs=103.1
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCC--CCeeEEEecc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPT--ELFDLIFDYT 182 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~D~v~~~~ 182 (274)
.++.+|||+|||+|..+..+++. +.+++++|+++.+++.|+++....+...++ ++.+|..+..+. ++||+|++..
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~D~i~~~~ 102 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVPDNPDVIFIGG 102 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCCSCCSEEEECC
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccCCCCCEEEECC
Confidence 45579999999999999999884 679999999999999999999887766578 888888764433 7899999998
Q ss_pred cccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEee
Q 024021 183 FFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 183 ~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 248 (274)
++++ ..+++.+.++|+|||.+++...... +...+.++++..|+.+..+..
T Consensus 103 ~~~~------~~~l~~~~~~L~~gG~l~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~ 152 (178)
T 3hm2_A 103 GLTA------PGVFAAAWKRLPVGGRLVANAVTVE----------SEQMLWALRKQFGGTISSFAI 152 (178)
T ss_dssp -TTC------TTHHHHHHHTCCTTCEEEEEECSHH----------HHHHHHHHHHHHCCEEEEEEE
T ss_pred cccH------HHHHHHHHHhcCCCCEEEEEeeccc----------cHHHHHHHHHHcCCeeEEEEe
Confidence 8876 3578999999999999998774332 567888999999988877644
No 91
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.71 E-value=4.3e-17 Score=135.53 Aligned_cols=132 Identities=19% Similarity=0.246 Sum_probs=108.1
Q ss_pred HHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEE
Q 024021 100 HLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIF 179 (274)
Q Consensus 100 ~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~ 179 (274)
+.+.....++.+|||+|||+|.++..+++.+.+|+++|+++.+++.++++...++.. +++..+|+.+..+.++||+|+
T Consensus 112 ~~l~~~~~~~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d~~~~~~~~~fD~Vv 189 (254)
T 2nxc_A 112 KALARHLRPGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSLEAALPFGPFDLLV 189 (254)
T ss_dssp HHHHHHCCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCHHHHGGGCCEEEEE
T ss_pred HHHHHhcCCCCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChhhcCcCCCCCEEE
Confidence 333333456789999999999999999888889999999999999999998877653 899999987754457899999
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEee
Q 024021 180 DYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 180 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 248 (274)
++...+ ....++..+.++|+|||++++...... ..+++.+.++++||.++....
T Consensus 190 ~n~~~~-----~~~~~l~~~~~~LkpgG~lils~~~~~----------~~~~v~~~l~~~Gf~~~~~~~ 243 (254)
T 2nxc_A 190 ANLYAE-----LHAALAPRYREALVPGGRALLTGILKD----------RAPLVREAMAGAGFRPLEEAA 243 (254)
T ss_dssp EECCHH-----HHHHHHHHHHHHEEEEEEEEEEEEEGG----------GHHHHHHHHHHTTCEEEEEEE
T ss_pred ECCcHH-----HHHHHHHHHHHHcCCCCEEEEEeeccC----------CHHHHHHHHHHCCCEEEEEec
Confidence 876543 346788999999999999998764332 578999999999999988765
No 92
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.71 E-value=1.5e-16 Score=129.18 Aligned_cols=128 Identities=22% Similarity=0.256 Sum_probs=105.0
Q ss_pred CCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-CCCCCeeEEEeccccccc
Q 024021 109 KGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-CPTELFDLIFDYTFFCAI 187 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~~~~~ 187 (274)
+.+|||+|||+|.++..++.. +++|+++.+++.++++ +++++.+|+.+. .+.++||+|++..+++++
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~----~~vD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 115 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK----IGVEPSERMAEIARKR--------GVFVLKGTAENLPLKDESFDFALMVTTICFV 115 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC----EEEESCHHHHHHHHHT--------TCEEEECBTTBCCSCTTCEEEEEEESCGGGS
T ss_pred CCcEEEeCCCCCHHHHHHHHH----hccCCCHHHHHHHHhc--------CCEEEEcccccCCCCCCCeeEEEEcchHhhc
Confidence 789999999999999998776 9999999999999887 378999998773 445689999999999998
Q ss_pred ChhHHHHHHHHHHhcccCCcEEEEEEccCCCC-------------CCCCCcccCHHHHHHHHhcCCCcEEEEeecc
Q 024021 188 EPEMRAAWAQKIKDFLKPDGELITLMFPISDH-------------VGGPPYKVSVSDYEEVLQPMGFQAISIVDNK 250 (274)
Q Consensus 188 ~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 250 (274)
++ ...+++.+.++|+|||.+++........ .......++.+++.++++++||+++.+....
T Consensus 116 ~~--~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~~ 189 (219)
T 1vlm_A 116 DD--PERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVVQTL 189 (219)
T ss_dssp SC--HHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEEEEC
T ss_pred cC--HHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEeccc
Confidence 53 3678999999999999999987654211 0111233689999999999999998887643
No 93
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.71 E-value=2.1e-16 Score=131.69 Aligned_cols=132 Identities=15% Similarity=0.151 Sum_probs=108.2
Q ss_pred CCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC---CCCCeeEEEeccc
Q 024021 108 PKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC---PTELFDLIFDYTF 183 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~D~v~~~~~ 183 (274)
++.+|||+|||+|..+..+++.+. +|+|+|+++.+++.|++++..+++.++++++.+|+.+.. +.++||+|+++.+
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npP 128 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPP 128 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECCC
T ss_pred CCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECCC
Confidence 578999999999999999988655 999999999999999999998888778999999998843 3678999999877
Q ss_pred cccc------C------------hhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEE
Q 024021 184 FCAI------E------------PEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAIS 245 (274)
Q Consensus 184 ~~~~------~------------~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 245 (274)
+... . ......+++.+.++|+|||+++++.... ...++.+.++++||....
T Consensus 129 y~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-----------~~~~~~~~l~~~~~~~~~ 197 (259)
T 3lpm_A 129 YFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPE-----------RLLDIIDIMRKYRLEPKR 197 (259)
T ss_dssp C-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTT-----------THHHHHHHHHHTTEEEEE
T ss_pred CCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHH-----------HHHHHHHHHHHCCCceEE
Confidence 6433 0 0234678999999999999999965222 578899999999999888
Q ss_pred Eeecc
Q 024021 246 IVDNK 250 (274)
Q Consensus 246 ~~~~~ 250 (274)
+....
T Consensus 198 ~~~v~ 202 (259)
T 3lpm_A 198 IQFVH 202 (259)
T ss_dssp EEEEE
T ss_pred EEEee
Confidence 76643
No 94
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.70 E-value=1.4e-16 Score=133.98 Aligned_cols=139 Identities=16% Similarity=0.168 Sum_probs=109.0
Q ss_pred HHHHHHhcCCCCCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCC
Q 024021 97 IIVHLHQSGALPKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTEL 174 (274)
Q Consensus 97 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 174 (274)
.+..++.....++.+|||+|||+|..+..+++ ++.+|+++|+++.+++.|+++....+.. +++++.+|+.+..+.++
T Consensus 98 l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~-~v~~~~~d~~~~~~~~~ 176 (276)
T 2b3t_A 98 LVEQALARLPEQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSALAGQQ 176 (276)
T ss_dssp HHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCSTTGGGTTCC
T ss_pred HHHHHHHhcccCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEEcchhhhcccCC
Confidence 34444444334567999999999999999885 5779999999999999999998776553 69999999988655678
Q ss_pred eeEEEecccccccCh-----------------------hHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHH
Q 024021 175 FDLIFDYTFFCAIEP-----------------------EMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSD 231 (274)
Q Consensus 175 ~D~v~~~~~~~~~~~-----------------------~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~ 231 (274)
||+|+++.++..... .....+++.+.++|+|||++++... ....++
T Consensus 177 fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~-----------~~~~~~ 245 (276)
T 2b3t_A 177 FAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHG-----------WQQGEA 245 (276)
T ss_dssp EEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECC-----------SSCHHH
T ss_pred ccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEEC-----------chHHHH
Confidence 999999865543211 3456788999999999999988641 125789
Q ss_pred HHHHHhcCCCcEEEEe
Q 024021 232 YEEVLQPMGFQAISIV 247 (274)
Q Consensus 232 ~~~~l~~~Gf~~~~~~ 247 (274)
+.++++++||..+.+.
T Consensus 246 ~~~~l~~~Gf~~v~~~ 261 (276)
T 2b3t_A 246 VRQAFILAGYHDVETC 261 (276)
T ss_dssp HHHHHHHTTCTTCCEE
T ss_pred HHHHHHHCCCcEEEEE
Confidence 9999999999876554
No 95
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.70 E-value=5.1e-16 Score=125.13 Aligned_cols=129 Identities=19% Similarity=0.211 Sum_probs=103.7
Q ss_pred HHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-CCCCCee
Q 024021 99 VHLHQSGALPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-CPTELFD 176 (274)
Q Consensus 99 ~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~D 176 (274)
..++.....++.+|||+|||+|..+..+ +. +++++|+++.+++.++++. .+++++.+|+.+. .+.++||
T Consensus 27 ~~~l~~~~~~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD 97 (211)
T 2gs9_A 27 ERALKGLLPPGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA------PEATWVRAWGEALPFPGESFD 97 (211)
T ss_dssp HHHHHTTCCCCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC------TTSEEECCCTTSCCSCSSCEE
T ss_pred HHHHHHhcCCCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC------CCcEEEEcccccCCCCCCcEE
Confidence 3445544446789999999999999888 66 9999999999999999987 4588999999873 4567899
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC----------CCC----CCcccCHHHHHHHHhcCC
Q 024021 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH----------VGG----PPYKVSVSDYEEVLQPMG 240 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~----------~~~----~~~~~~~~~~~~~l~~~G 240 (274)
+|++..+++++++ ...+++++.++|+|||.+++..+..... ... ....++.+++.++++ |
T Consensus 98 ~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~--G 171 (211)
T 2gs9_A 98 VVLLFTTLEFVED--VERVLLEARRVLRPGGALVVGVLEALSPWAALYRRLGEKGVLPWAQARFLAREDLKALLG--P 171 (211)
T ss_dssp EEEEESCTTTCSC--HHHHHHHHHHHEEEEEEEEEEEECTTSHHHHHHHHHHHTTCTTGGGCCCCCHHHHHHHHC--S
T ss_pred EEEEcChhhhcCC--HHHHHHHHHHHcCCCCEEEEEecCCcCcHHHHHHHHhhccCccccccccCCHHHHHHHhc--C
Confidence 9999999999863 4688999999999999999988655321 011 123369999999999 7
No 96
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.70 E-value=1.5e-16 Score=126.99 Aligned_cols=147 Identities=17% Similarity=0.137 Sum_probs=107.5
Q ss_pred HHHhcCCCCCCeEEEEcCCcchhHHHhhC---CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC--CCCCC
Q 024021 100 HLHQSGALPKGRALVPGCGTGYDVVAMAS---PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW--CPTEL 174 (274)
Q Consensus 100 ~~~~~~~~~~~~vLDiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~ 174 (274)
.++.....++.+|||+|||+|..+..+++ +..+++++|+++.+++.|+++....+..++++++.+|+.+. ...++
T Consensus 14 ~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 93 (197)
T 3eey_A 14 DYIKMFVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCP 93 (197)
T ss_dssp HHHHHHCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSC
T ss_pred HHHHhcCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCC
Confidence 33333345678999999999999998877 34699999999999999999998877667899999998773 45578
Q ss_pred eeEEEecccccc-------cChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHH---hcCCCcEE
Q 024021 175 FDLIFDYTFFCA-------IEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVL---QPMGFQAI 244 (274)
Q Consensus 175 ~D~v~~~~~~~~-------~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~Gf~~~ 244 (274)
||+|+++..+.. ........+++.+.++|+|||++++..+..... + ....+.+.+++ ...+|.+.
T Consensus 94 fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~--~---~~~~~~~~~~~~~l~~~~~~v~ 168 (197)
T 3eey_A 94 VKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDT--G---FEEKEKVLEFLKGVDQKKFIVQ 168 (197)
T ss_dssp EEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTT--B---SHHHHHHHHHHTTSCTTTEEEE
T ss_pred ceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCC--c---HHHHHHHHHHHHhCCCCcEEEE
Confidence 999998875511 122345579999999999999999988654321 1 11233344444 45678887
Q ss_pred EEeeccc
Q 024021 245 SIVDNKL 251 (274)
Q Consensus 245 ~~~~~~~ 251 (274)
.......
T Consensus 169 ~~~~~~~ 175 (197)
T 3eey_A 169 RTDFINQ 175 (197)
T ss_dssp EEEETTC
T ss_pred EEEeccC
Confidence 7766543
No 97
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.70 E-value=1.3e-16 Score=129.04 Aligned_cols=131 Identities=14% Similarity=0.035 Sum_probs=102.8
Q ss_pred CCCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC---CCCCCeeEEEec
Q 024021 107 LPKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW---CPTELFDLIFDY 181 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~D~v~~~ 181 (274)
.++.+|||+|||+|.++..+++ ++.+++|+|+++.+++.|+++....+. .+++++.+|+.+. .+.++||+|+++
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~D~i~~~ 118 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGV-PNIKLLWVDGSDLTDYFEDGEIDRLYLN 118 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-SSEEEEECCSSCGGGTSCTTCCSEEEEE
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhcCCCCCCEEEEE
Confidence 3467999999999999998887 467999999999999999999877665 5799999999873 456789999988
Q ss_pred ccccccChh------HHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEee
Q 024021 182 TFFCAIEPE------MRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 182 ~~~~~~~~~------~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 248 (274)
....+.... ....+++.+.++|+|||.+++.+... ...+++.+.++++||..+.+..
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~----------~~~~~~~~~~~~~g~~~~~~~~ 181 (214)
T 1yzh_A 119 FSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNR----------GLFEYSLVSFSQYGMKLNGVWL 181 (214)
T ss_dssp SCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCH----------HHHHHHHHHHHHHTCEEEEEES
T ss_pred CCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCH----------HHHHHHHHHHHHCCCeeeeccc
Confidence 654322110 12468999999999999998876211 0236778889999999887764
No 98
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.70 E-value=4.9e-16 Score=123.06 Aligned_cols=138 Identities=17% Similarity=0.174 Sum_probs=108.1
Q ss_pred HHHHHHHhcCC-CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCc-ceEEEEcccCCCCCCC
Q 024021 96 PIIVHLHQSGA-LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAK-FVSFLKADFFTWCPTE 173 (274)
Q Consensus 96 ~~~~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-~~~~~~~d~~~~~~~~ 173 (274)
.....++.... .++.+|||+|||+|.++..+++.+.+++++|+++.+++.++++....+..+ +++++.+|+.+..+.+
T Consensus 39 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 118 (194)
T 1dus_A 39 KGTKILVENVVVDKDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKDR 118 (194)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCTTS
T ss_pred hHHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccccC
Confidence 34444554443 356799999999999999998888899999999999999999987766543 4999999998866677
Q ss_pred CeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEE
Q 024021 174 LFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAIS 245 (274)
Q Consensus 174 ~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 245 (274)
+||+|+++.++++ ..+....+++.+.++|+|||.+++...... ...++.+.+++. |..++
T Consensus 119 ~~D~v~~~~~~~~-~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~----------~~~~~~~~l~~~-~~~~~ 178 (194)
T 1dus_A 119 KYNKIITNPPIRA-GKEVLHRIIEEGKELLKDNGEIWVVIQTKQ----------GAKSLAKYMKDV-FGNVE 178 (194)
T ss_dssp CEEEEEECCCSTT-CHHHHHHHHHHHHHHEEEEEEEEEEEESTH----------HHHHHHHHHHHH-HSCCE
T ss_pred CceEEEECCCccc-chhHHHHHHHHHHHHcCCCCEEEEEECCCC----------ChHHHHHHHHHH-hcceE
Confidence 8999999888765 235667899999999999999999875432 345577777776 44333
No 99
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.69 E-value=2.1e-16 Score=124.95 Aligned_cols=126 Identities=21% Similarity=0.170 Sum_probs=104.3
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCC-CCeeEEEecccc
Q 024021 106 ALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPT-ELFDLIFDYTFF 184 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~D~v~~~~~~ 184 (274)
..++.+|||+|||+|..+..+++.+.+++++|+++.+++.++++....+...++++..+|+.+..+. ++||+|++..++
T Consensus 31 ~~~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~ 110 (192)
T 1l3i_A 31 PGKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDIDIAVVGGSG 110 (192)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCCEEEEEESCCT
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccCCCCCEEEECCch
Confidence 3456899999999999999999877999999999999999999988776656899999998773333 589999998876
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEE
Q 024021 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISI 246 (274)
Q Consensus 185 ~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 246 (274)
+++ ..+++.+.++|+|||.+++..... .+..++.+.++++||.+...
T Consensus 111 ~~~-----~~~l~~~~~~l~~gG~l~~~~~~~----------~~~~~~~~~l~~~g~~~~~~ 157 (192)
T 1l3i_A 111 GEL-----QEILRIIKDKLKPGGRIIVTAILL----------ETKFEAMECLRDLGFDVNIT 157 (192)
T ss_dssp TCH-----HHHHHHHHHTEEEEEEEEEEECBH----------HHHHHHHHHHHHTTCCCEEE
T ss_pred HHH-----HHHHHHHHHhcCCCcEEEEEecCc----------chHHHHHHHHHHCCCceEEE
Confidence 543 578899999999999999877432 15678899999999955443
No 100
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.69 E-value=5.4e-16 Score=135.68 Aligned_cols=132 Identities=16% Similarity=0.203 Sum_probs=108.3
Q ss_pred CCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccccc
Q 024021 109 KGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFCA 186 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~ 186 (274)
..+|||+|||+|..+..+++ ++.+++++|+ +.+++.+++. ++++++.+|++++.+.. |+|++..++++
T Consensus 204 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~~~p~~--D~v~~~~vlh~ 273 (368)
T 3reo_A 204 LTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF-------SGVEHLGGDMFDGVPKG--DAIFIKWICHD 273 (368)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTTCCCCC--SEEEEESCGGG
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc-------CCCEEEecCCCCCCCCC--CEEEEechhhc
Confidence 47999999999999999987 6789999999 8888766532 57999999998855533 99999999999
Q ss_pred cChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCC-------------------CCcccCHHHHHHHHhcCCCcEEEEe
Q 024021 187 IEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGG-------------------PPYKVSVSDYEEVLQPMGFQAISIV 247 (274)
Q Consensus 187 ~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~l~~~Gf~~~~~~ 247 (274)
++++....++++++++|+|||++++.+....+.... .....+.+++.++++++||+.+++.
T Consensus 274 ~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~ 353 (368)
T 3reo_A 274 WSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRGFKVA 353 (368)
T ss_dssp BCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHTTCCEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHCCCeeeEEE
Confidence 998888899999999999999999988765432211 1122478999999999999999987
Q ss_pred ecc
Q 024021 248 DNK 250 (274)
Q Consensus 248 ~~~ 250 (274)
...
T Consensus 354 ~~~ 356 (368)
T 3reo_A 354 SCA 356 (368)
T ss_dssp EEE
T ss_pred EeC
Confidence 643
No 101
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.68 E-value=5.7e-16 Score=124.47 Aligned_cols=123 Identities=13% Similarity=0.143 Sum_probs=100.1
Q ss_pred CCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccccc
Q 024021 108 PKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFC 185 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~ 185 (274)
++.+|||+|||+|..+..++. ++.+++++|+++.+++.++++....+.. ++++..+|+.+..+.++||+|+++.+ .
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~D~i~~~~~-~ 142 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLE-NIEPVQSRVEEFPSEPPFDGVISRAF-A 142 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCS-SEEEEECCTTTSCCCSCEEEEECSCS-S
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEecchhhCCccCCcCEEEEecc-C
Confidence 468999999999999998886 4779999999999999999998877654 49999999988666678999998653 2
Q ss_pred ccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeecc
Q 024021 186 AIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDNK 250 (274)
Q Consensus 186 ~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 250 (274)
....+++.+.++|+|||.+++.... ...+++.++++ ||..+.+....
T Consensus 143 -----~~~~~l~~~~~~L~~gG~l~~~~~~-----------~~~~~~~~~~~--g~~~~~~~~~~ 189 (207)
T 1jsx_A 143 -----SLNDMVSWCHHLPGEQGRFYALKGQ-----------MPEDEIALLPE--EYQVESVVKLQ 189 (207)
T ss_dssp -----SHHHHHHHHTTSEEEEEEEEEEESS-----------CCHHHHHTSCT--TEEEEEEEEEE
T ss_pred -----CHHHHHHHHHHhcCCCcEEEEEeCC-----------CchHHHHHHhc--CCceeeeeeec
Confidence 2357899999999999999987521 14677777766 99988766543
No 102
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.68 E-value=2.4e-16 Score=129.84 Aligned_cols=130 Identities=16% Similarity=0.183 Sum_probs=102.6
Q ss_pred CCCeEEEEcCCcchhHHHhh--CCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC----CCCeeEEEec
Q 024021 108 PKGRALVPGCGTGYDVVAMA--SPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP----TELFDLIFDY 181 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~--~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~D~v~~~ 181 (274)
++.+|||+|||+|..+..++ .++.+|+++|+++.+++.|+++....+.. +++++.+|+.+... .++||+|++.
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLE-NTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEeccHHHhcccccccCCccEEEEe
Confidence 46799999999999999888 57889999999999999999998776653 59999999877331 4689999987
Q ss_pred ccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeecccc
Q 024021 182 TFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDNKLA 252 (274)
Q Consensus 182 ~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~ 252 (274)
.+ .....+++.+.++|+|||.+++... .......+++.+.++..||.++.+.....+
T Consensus 149 ~~------~~~~~~l~~~~~~LkpgG~l~~~~g--------~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~ 205 (240)
T 1xdz_A 149 AV------ARLSVLSELCLPLVKKNGLFVALKA--------ASAEEELNAGKKAITTLGGELENIHSFKLP 205 (240)
T ss_dssp CC------SCHHHHHHHHGGGEEEEEEEEEEEC--------C-CHHHHHHHHHHHHHTTEEEEEEEEEECT
T ss_pred cc------CCHHHHHHHHHHhcCCCCEEEEEeC--------CCchHHHHHHHHHHHHcCCeEeEEEEEecC
Confidence 63 1246789999999999999988641 111123456778899999999887765433
No 103
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.68 E-value=6.2e-16 Score=125.83 Aligned_cols=136 Identities=16% Similarity=0.134 Sum_probs=101.6
Q ss_pred CCCCCeEEEEcCCcchhHHHhhC---CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC----CCCCCCeeEE
Q 024021 106 ALPKGRALVPGCGTGYDVVAMAS---PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT----WCPTELFDLI 178 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~D~v 178 (274)
..|+.+|||+|||+|.++..+++ +..+|+++|+++++++.++++.... .++..+.+|... ....+.+|+|
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~---~ni~~V~~d~~~p~~~~~~~~~vDvV 151 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR---RNIFPILGDARFPEKYRHLVEGVDGL 151 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC---TTEEEEESCTTCGGGGTTTCCCEEEE
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh---cCeeEEEEeccCccccccccceEEEE
Confidence 45678999999999999999987 5679999999999999999988665 478999998876 2345789999
Q ss_pred EecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeec
Q 024021 179 FDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDN 249 (274)
Q Consensus 179 ~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 249 (274)
++... +. ++...++.++.+.|||||++++...........++.. ...+..+.|+++||++++....
T Consensus 152 f~d~~--~~--~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~-~~~~ev~~L~~~GF~l~e~i~L 217 (233)
T 4df3_A 152 YADVA--QP--EQAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSE-VYKREIKTLMDGGLEIKDVVHL 217 (233)
T ss_dssp EECCC--CT--THHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCH-HHHHHHHHHHHTTCCEEEEEEC
T ss_pred EEecc--CC--hhHHHHHHHHHHhccCCCEEEEEEecccCCCCCChHH-HHHHHHHHHHHCCCEEEEEEcc
Confidence 86433 22 3456789999999999999998753332111111111 2345567788999999887663
No 104
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.68 E-value=4.3e-16 Score=132.05 Aligned_cols=138 Identities=17% Similarity=0.177 Sum_probs=99.8
Q ss_pred CCCeEEEEcCCcchhHHHh----hC--CCCeE--EEEeCChHHHHHHHHHhhcCCCCcceEE--EEcccCCC-------C
Q 024021 108 PKGRALVPGCGTGYDVVAM----AS--PERYV--VGLEISDIAIKKAEELSSSLPNAKFVSF--LKADFFTW-------C 170 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l----~~--~~~~v--~~vD~~~~~~~~a~~~~~~~~~~~~~~~--~~~d~~~~-------~ 170 (274)
++.+|||||||+|..+..+ +. ++..+ +++|+|++|++.|+++........++.+ ..++..+. .
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 131 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKK 131 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcccc
Confidence 4579999999999765433 22 45544 9999999999999998764321234444 45554432 2
Q ss_pred CCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC-----------CC--CCCcccCHHHHHHHHh
Q 024021 171 PTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH-----------VG--GPPYKVSVSDYEEVLQ 237 (274)
Q Consensus 171 ~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~-----------~~--~~~~~~~~~~~~~~l~ 237 (274)
++++||+|++..+++++++ ...++++++++|||||++++........ .. .....++.+++.++|+
T Consensus 132 ~~~~fD~V~~~~~l~~~~d--~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 209 (292)
T 2aot_A 132 ELQKWDFIHMIQMLYYVKD--IPATLKFFHSLLGTNAKMLIIVVSGSSGWDKLWKKYGSRFPQDDLCQYITSDDLTQMLD 209 (292)
T ss_dssp CCCCEEEEEEESCGGGCSC--HHHHHHHHHHTEEEEEEEEEEEECTTSHHHHHHHHHGGGSCCCTTCCCCCHHHHHHHHH
T ss_pred CCCceeEEEEeeeeeecCC--HHHHHHHHHHHcCCCcEEEEEEecCCccHHHHHHHHHHhccCCCcccCCCHHHHHHHHH
Confidence 4678999999999999964 3678999999999999999876543210 00 1123468999999999
Q ss_pred cCCCcEEEEe
Q 024021 238 PMGFQAISIV 247 (274)
Q Consensus 238 ~~Gf~~~~~~ 247 (274)
++||+++...
T Consensus 210 ~aGf~~~~~~ 219 (292)
T 2aot_A 210 NLGLKYECYD 219 (292)
T ss_dssp HHTCCEEEEE
T ss_pred HCCCceEEEE
Confidence 9999987743
No 105
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.68 E-value=1.6e-16 Score=133.23 Aligned_cols=103 Identities=15% Similarity=0.089 Sum_probs=85.8
Q ss_pred CCCCCeEEEEcCCcchhH-HHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccc
Q 024021 106 ALPKGRALVPGCGTGYDV-VAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTF 183 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~-~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~ 183 (274)
..++.+|||+|||+|..+ ..+++ .+++|+|+|+++++++.|++++...+. ++++|+.+|+.+.. +++||+|++...
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l~-d~~FDvV~~~a~ 197 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVID-GLEFDVLMVAAL 197 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGGG-GCCCSEEEECTT
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhCC-CCCcCEEEECCC
Confidence 356789999999998765 44555 788999999999999999999987777 78999999998854 678999997654
Q ss_pred ccccChhHHHHHHHHHHhcccCCcEEEEEEcc
Q 024021 184 FCAIEPEMRAAWAQKIKDFLKPDGELITLMFP 215 (274)
Q Consensus 184 ~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 215 (274)
. +....+++++.++|+|||++++....
T Consensus 198 ---~--~d~~~~l~el~r~LkPGG~Lvv~~~~ 224 (298)
T 3fpf_A 198 ---A--EPKRRVFRNIHRYVDTETRIIYRTYT 224 (298)
T ss_dssp ---C--SCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred ---c--cCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence 2 23467899999999999999987743
No 106
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.67 E-value=5.6e-16 Score=132.60 Aligned_cols=144 Identities=17% Similarity=0.137 Sum_probs=110.9
Q ss_pred CCCCeEEEEcCCcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCC------CCcceEEEEcccCCCC-------CC
Q 024021 107 LPKGRALVPGCGTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLP------NAKFVSFLKADFFTWC-------PT 172 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~------~~~~~~~~~~d~~~~~-------~~ 172 (274)
.++.+|||+|||+|..+..+++ .+.+++++|+++.+++.|+++....+ ...+++++.+|+.+.. +.
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 3567999999999999998886 46699999999999999999875421 1246999999998743 23
Q ss_pred CCeeEEEeccccccc--ChhHHHHHHHHHHhcccCCcEEEEEEccCC---------------CC--------C-C-----
Q 024021 173 ELFDLIFDYTFFCAI--EPEMRAAWAQKIKDFLKPDGELITLMFPIS---------------DH--------V-G----- 221 (274)
Q Consensus 173 ~~~D~v~~~~~~~~~--~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~---------------~~--------~-~----- 221 (274)
++||+|++..+++++ +.+....++.++.++|+|||.+++..+... .. . .
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 192 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYPLFG 192 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHHHHTTSSSSEEECSSEEEEESCSSCCCSSC
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCChHHHHHHHHhhccCccCCeeEEEEeCCCCCCCCcc
Confidence 589999999999887 445677999999999999999998775321 00 0 0
Q ss_pred ------------CCCcccCHHHHHHHHhcCCCcEEEEeecc
Q 024021 222 ------------GPPYKVSVSDYEEVLQPMGFQAISIVDNK 250 (274)
Q Consensus 222 ------------~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 250 (274)
.+.+..+.+++.+++++.||+++......
T Consensus 193 ~~~~f~l~~~~~~~~~~~~~~~~~~l~~~~G~~~v~~~~f~ 233 (313)
T 3bgv_A 193 CKYDFNLEGVVDVPEFLVYFPLLNEMAKKYNMKLVYKKTFL 233 (313)
T ss_dssp CEEEEEEC---CCEEECCCHHHHHHHGGGGTEEEEEEEEHH
T ss_pred ceEEEEECCcccCcceEEcHHHHHHHHHHcCcEEEEecCHH
Confidence 00122567899999999999999886533
No 107
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.67 E-value=8.4e-16 Score=134.26 Aligned_cols=133 Identities=17% Similarity=0.210 Sum_probs=108.6
Q ss_pred CCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccccc
Q 024021 108 PKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFC 185 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~ 185 (274)
+..+|||||||+|..+..+++ ++.+++++|+ +.+++.|++. ++++|+.+|++++.+.. |+|++..+++
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~D~~~~~p~~--D~v~~~~vlh 270 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF-------PGVTHVGGDMFKEVPSG--DTILMKWILH 270 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTTCCCCC--SEEEEESCGG
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc-------CCeEEEeCCcCCCCCCC--CEEEehHHhc
Confidence 347999999999999999987 6789999999 8887766532 57999999998855443 9999999999
Q ss_pred ccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCC-------------------CCcccCHHHHHHHHhcCCCcEEEE
Q 024021 186 AIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGG-------------------PPYKVSVSDYEEVLQPMGFQAISI 246 (274)
Q Consensus 186 ~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~l~~~Gf~~~~~ 246 (274)
+++++....++++++++|+|||++++.+....+.... .....+.+++.++++++||+.+++
T Consensus 271 ~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~AGF~~v~~ 350 (364)
T 3p9c_A 271 DWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAGFTGVKS 350 (364)
T ss_dssp GSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHTTCCEEEE
T ss_pred cCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHCCCceEEE
Confidence 9998888899999999999999999988765432111 111246899999999999999998
Q ss_pred eecc
Q 024021 247 VDNK 250 (274)
Q Consensus 247 ~~~~ 250 (274)
....
T Consensus 351 ~~~~ 354 (364)
T 3p9c_A 351 TYIY 354 (364)
T ss_dssp EEEE
T ss_pred EEcC
Confidence 7643
No 108
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.67 E-value=7.6e-16 Score=129.33 Aligned_cols=132 Identities=15% Similarity=0.123 Sum_probs=106.2
Q ss_pred CCeEEEEcCCc---chhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC------------CC
Q 024021 109 KGRALVPGCGT---GYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW------------CP 171 (274)
Q Consensus 109 ~~~vLDiG~G~---G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~------------~~ 171 (274)
..+|||+|||+ |..+..+.+ ++.+|+++|+|+.+++.|+++.... ++++++.+|+.+. .+
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~---~~v~~~~~D~~~~~~~~~~~~~~~~~d 154 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKD---PNTAVFTADVRDPEYILNHPDVRRMID 154 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTC---TTEEEEECCTTCHHHHHHSHHHHHHCC
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCC---CCeEEEEeeCCCchhhhccchhhccCC
Confidence 37999999999 988766654 6789999999999999999988543 5799999999762 22
Q ss_pred CCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC------------CCCCCcccCHHHHHHHHhcC
Q 024021 172 TELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH------------VGGPPYKVSVSDYEEVLQPM 239 (274)
Q Consensus 172 ~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~l~~~ 239 (274)
..+||+|++..++++++++....+++++.++|+|||++++.++..... ...+....+.+++.+++ .
T Consensus 155 ~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ei~~~l--~ 232 (274)
T 2qe6_A 155 FSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDTGLPAQQKLARITRENLGEGWARTPEEIERQF--G 232 (274)
T ss_dssp TTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCSSCHHHHHHHHHHHHHHSCCCCBCHHHHHHTT--T
T ss_pred CCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCcchHHHHHHHHHHHhcCCCCccCCHHHHHHHh--C
Confidence 357999999999999987667889999999999999999988765310 01123345899999999 4
Q ss_pred CCcEEE
Q 024021 240 GFQAIS 245 (274)
Q Consensus 240 Gf~~~~ 245 (274)
||+++.
T Consensus 233 G~~l~~ 238 (274)
T 2qe6_A 233 DFELVE 238 (274)
T ss_dssp TCEECT
T ss_pred CCeEcc
Confidence 898765
No 109
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.67 E-value=4.1e-16 Score=131.30 Aligned_cols=131 Identities=12% Similarity=0.034 Sum_probs=107.5
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccc
Q 024021 106 ALPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFF 184 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~ 184 (274)
..++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.|+++...++..++++++.+|+.+..+.++||+|++....
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~~~p~ 202 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYVV 202 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCCS
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEECCch
Confidence 34578999999999999999998666 69999999999999999998888777799999999996667889999986553
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEE
Q 024021 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISI 246 (274)
Q Consensus 185 ~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 246 (274)
.. ..++..+.++|+|||.+++.++...... .....+++.+.++++||.+..+
T Consensus 203 ~~------~~~l~~~~~~LkpgG~l~~~~~~~~~~~----~~~~~~~i~~~~~~~G~~~~~~ 254 (278)
T 2frn_A 203 RT------HEFIPKALSIAKDGAIIHYHNTVPEKLM----PREPFETFKRITKEYGYDVEKL 254 (278)
T ss_dssp SG------GGGHHHHHHHEEEEEEEEEEEEEEGGGT----TTTTHHHHHHHHHHTTCEEEEE
T ss_pred hH------HHHHHHHHHHCCCCeEEEEEEeeccccc----cccHHHHHHHHHHHcCCeeEEe
Confidence 32 3577899999999999999876542111 1125688899999999998764
No 110
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.67 E-value=2.4e-16 Score=123.00 Aligned_cols=136 Identities=12% Similarity=0.015 Sum_probs=100.5
Q ss_pred CCCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFF 184 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~ 184 (274)
.++.+|||+|||+|.++..++. ++.+|+++|+++.+++.+++++...+...++++ .|.....++++||+|++..++
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~~~~~DvVLa~k~L 125 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVYKGTYDVVFLLKML 125 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHTTSEEEEEEEETCH
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCCCCCcChhhHhhHH
Confidence 4468999999999999999976 577999999999999999999988876556666 666655667889999999999
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEccC-CCCCCCCCcccCHHHHHHHHhcCCCcEEEEe
Q 024021 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMFPI-SDHVGGPPYKVSVSDYEEVLQPMGFQAISIV 247 (274)
Q Consensus 185 ~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 247 (274)
+++ ++.+..+.++.+.|+|||+++...-.. .....+ ....-...+.+.+.+-++.+.+.+
T Consensus 126 HlL--~~~~~al~~v~~~L~pggvfISfptksl~Gr~~g-m~~~Y~~~~~~~~~~~~~~~~~~~ 186 (200)
T 3fzg_A 126 PVL--KQQDVNILDFLQLFHTQNFVISFPIKSLSGKEKG-MEENYQLWFESFTKGWIKILDSKV 186 (200)
T ss_dssp HHH--HHTTCCHHHHHHTCEEEEEEEEEECCCCC--CTT-CCCCHHHHHHHHTTTTSCEEEEEE
T ss_pred Hhh--hhhHHHHHHHHHHhCCCCEEEEeChHHhcCCCcc-hhhhHHHHHHHhccCcceeeeeee
Confidence 999 445566779999999999887765111 111111 111235677777766555544433
No 111
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.67 E-value=5.2e-16 Score=121.83 Aligned_cols=123 Identities=12% Similarity=0.091 Sum_probs=102.4
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFCA 186 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~ 186 (274)
.++.+|||+|||+|..+..+++.+.+++++|+++.+++.++++....+. .+++++.+|+.+..+.++||+|++..+ .
T Consensus 34 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~~~~~~~D~i~~~~~-~- 110 (183)
T 2yxd_A 34 NKDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNLAKFNI-KNCQIIKGRAEDVLDKLEFNKAFIGGT-K- 110 (183)
T ss_dssp CTTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHHHHTTC-CSEEEEESCHHHHGGGCCCSEEEECSC-S-
T ss_pred CCCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHcCC-CcEEEEECCccccccCCCCcEEEECCc-c-
Confidence 4567999999999999999999888999999999999999999887765 569999999987555578999999888 2
Q ss_pred cChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEee
Q 024021 187 IEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 187 ~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 248 (274)
....+++.+.++ |||.+++...... ...++.+.++++||.+..+..
T Consensus 111 ----~~~~~l~~~~~~--~gG~l~~~~~~~~----------~~~~~~~~l~~~g~~~~~~~~ 156 (183)
T 2yxd_A 111 ----NIEKIIEILDKK--KINHIVANTIVLE----------NAAKIINEFESRGYNVDAVNV 156 (183)
T ss_dssp ----CHHHHHHHHHHT--TCCEEEEEESCHH----------HHHHHHHHHHHTTCEEEEEEE
T ss_pred ----cHHHHHHHHhhC--CCCEEEEEecccc----------cHHHHHHHHHHcCCeEEEEEe
Confidence 235678888888 9999999874332 467899999999988776644
No 112
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.67 E-value=3.2e-16 Score=127.95 Aligned_cols=133 Identities=15% Similarity=0.163 Sum_probs=104.1
Q ss_pred cHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC--CCC-
Q 024021 95 APIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT--WCP- 171 (274)
Q Consensus 95 ~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~- 171 (274)
...+..++.....++.+|||+|||+|.++..+++.+.+|+++|+++.+++.++++. ++++++.+|+.+ +.+
T Consensus 35 ~~l~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~ 108 (226)
T 3m33_A 35 ELTFDLWLSRLLTPQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARANA------PHADVYEWNGKGELPAGL 108 (226)
T ss_dssp THHHHHHHHHHCCTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHC------TTSEEEECCSCSSCCTTC
T ss_pred HHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhC------CCceEEEcchhhccCCcC
Confidence 34455555443456789999999999999999998889999999999999999983 469999999965 233
Q ss_pred CCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeeccc
Q 024021 172 TELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDNKL 251 (274)
Q Consensus 172 ~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 251 (274)
.++||+|+++.- ...++.++.++|+|||.++.... ..+.+++.+.++++||..+.+.....
T Consensus 109 ~~~fD~v~~~~~--------~~~~l~~~~~~LkpgG~l~~~~~-----------~~~~~~~~~~l~~~Gf~~~~~~~~~~ 169 (226)
T 3m33_A 109 GAPFGLIVSRRG--------PTSVILRLPELAAPDAHFLYVGP-----------RLNVPEVPERLAAVGWDIVAEDHVSV 169 (226)
T ss_dssp CCCEEEEEEESC--------CSGGGGGHHHHEEEEEEEEEEES-----------SSCCTHHHHHHHHTTCEEEEEEEEEE
T ss_pred CCCEEEEEeCCC--------HHHHHHHHHHHcCCCcEEEEeCC-----------cCCHHHHHHHHHHCCCeEEEEEeeee
Confidence 578999998721 13567899999999999982211 12567899999999999988776544
Q ss_pred c
Q 024021 252 A 252 (274)
Q Consensus 252 ~ 252 (274)
.
T Consensus 170 ~ 170 (226)
T 3m33_A 170 L 170 (226)
T ss_dssp E
T ss_pred c
Confidence 3
No 113
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.67 E-value=1.9e-15 Score=140.69 Aligned_cols=159 Identities=10% Similarity=0.127 Sum_probs=115.8
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCC---CeEEEEeCChHHHHHHHHHhhc------CCCCcceEEEEcccCCC-CCCCCee
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPE---RYVVGLEISDIAIKKAEELSSS------LPNAKFVSFLKADFFTW-CPTELFD 176 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~------~~~~~~~~~~~~d~~~~-~~~~~~D 176 (274)
.++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|++++.. .+. .+++|+.+|+.+. ...++||
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl-~nVefiqGDa~dLp~~d~sFD 798 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNV-KSATLYDGSILEFDSRLHDVD 798 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSC-SEEEEEESCTTSCCTTSCSCC
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCC-CceEEEECchHhCCcccCCee
Confidence 367899999999999999999866 7999999999999999986542 122 4799999999883 4457899
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCC------------------------CCCCCCcccCHHHH
Q 024021 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISD------------------------HVGGPPYKVSVSDY 232 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~------------------------~~~~~~~~~~~~~~ 232 (274)
+|++..+++|++++....+++.+.++|+|| .+++.+..... ......+.++.+++
T Consensus 799 lVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~eyN~lF~~Lnp~tr~~dPd~~~~~~fRh~DHrFEWTReEF 877 (950)
T 3htx_A 799 IGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNYEFNTILQRSTPETQEENNSEPQLPKFRNHDHKFEWTREQF 877 (950)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBGGGHHHHTCC------------CCSSCSCSSCSCCBCHHHH
T ss_pred EEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCchhhhhhhhcccccccccccccccccccccCcceeecHHHH
Confidence 999999999999887778999999999999 76666533211 00112233567777
Q ss_pred HH----HHhcCCCcEEEEeecccccCCccchhHHHHhhh
Q 024021 233 EE----VLQPMGFQAISIVDNKLAIGPRKGREKLGRWKR 267 (274)
Q Consensus 233 ~~----~l~~~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (274)
.. +++..||.+.-..--.......+...++++|.|
T Consensus 878 r~Wae~LAer~GYsVefvGVGDg~ep~vG~~TQiAVFtR 916 (950)
T 3htx_A 878 NQWASKLGKRHNYSVEFSGVGGSGEVEPGFASQIAIFRR 916 (950)
T ss_dssp HHHHHHHHHHTTEEEEEEEESSCSSSTTCCSEEEEEEEE
T ss_pred HHHHHHHHHhcCcEEEEEccCCCCCCCCCCccEEEEEEE
Confidence 77 677779876444332221222333456666665
No 114
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.66 E-value=1.7e-15 Score=122.63 Aligned_cols=126 Identities=13% Similarity=-0.007 Sum_probs=105.2
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCCC--CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCC-CeeEEEecc
Q 024021 106 ALPKGRALVPGCGTGYDVVAMASPE--RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTE-LFDLIFDYT 182 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~D~v~~~~ 182 (274)
..++.+|||+|||+|.++..+++.+ .+|+++|+++.+++.|++++..+++.+++++..+|..+..+.+ +||+|+..+
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~IviaG 92 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAG 92 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEEEcC
Confidence 3456799999999999999998854 4899999999999999999999988888999999998755544 699998654
Q ss_pred cccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEe
Q 024021 183 FFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIV 247 (274)
Q Consensus 183 ~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 247 (274)
.- ......+++...+.|+++|++++... ...+.+.++|.++||.+++..
T Consensus 93 ~G----g~~i~~Il~~~~~~L~~~~~lVlq~~------------~~~~~vr~~L~~~Gf~i~~e~ 141 (225)
T 3kr9_A 93 MG----GRLIARILEEGLGKLANVERLILQPN------------NREDDLRIWLQDHGFQIVAES 141 (225)
T ss_dssp EC----HHHHHHHHHHTGGGCTTCCEEEEEES------------SCHHHHHHHHHHTTEEEEEEE
T ss_pred CC----hHHHHHHHHHHHHHhCCCCEEEEECC------------CCHHHHHHHHHHCCCEEEEEE
Confidence 42 24457789999999999999888552 157899999999999998754
No 115
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.66 E-value=7.6e-16 Score=127.77 Aligned_cols=115 Identities=10% Similarity=0.018 Sum_probs=88.7
Q ss_pred HHHHHhcCC-CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccC-CCCCCCCe
Q 024021 98 IVHLHQSGA-LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFF-TWCPTELF 175 (274)
Q Consensus 98 ~~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~ 175 (274)
+..++.... .++.+|||+|||+|.++..+++.+.+|+++|+|+.+++.|+++..... ....+...+.. .....++|
T Consensus 34 ~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~~~~--v~~~~~~~~~~~~~~~~~~f 111 (261)
T 3iv6_A 34 RENDIFLENIVPGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALADRC--VTIDLLDITAEIPKELAGHF 111 (261)
T ss_dssp HHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTSSSC--CEEEECCTTSCCCGGGTTCC
T ss_pred HHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcc--ceeeeeecccccccccCCCc
Confidence 344444443 456799999999999999999999999999999999999999986541 12233222220 11224689
Q ss_pred eEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEcc
Q 024021 176 DLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFP 215 (274)
Q Consensus 176 D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 215 (274)
|+|+++.++++++.+....++.++.++| |||++++....
T Consensus 112 D~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 112 DFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred cEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 9999999999998778888999999999 99999987643
No 116
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.66 E-value=2e-15 Score=122.38 Aligned_cols=136 Identities=13% Similarity=0.003 Sum_probs=110.1
Q ss_pred cHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCC--CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCC
Q 024021 95 APIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPE--RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPT 172 (274)
Q Consensus 95 ~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 172 (274)
...+..+... ..++.+|+|+|||+|.++..+++.+ .+|+++|+++.+++.|++++..+++.+++++..+|..+...+
T Consensus 9 s~RL~~i~~~-v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~ 87 (230)
T 3lec_A 9 SKRLQKVANY-VPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEE 87 (230)
T ss_dssp CHHHHHHHTT-SCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG
T ss_pred HHHHHHHHHh-CCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcccc
Confidence 3444444433 3456799999999999999999865 389999999999999999999998888999999999985544
Q ss_pred C-CeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEe
Q 024021 173 E-LFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIV 247 (274)
Q Consensus 173 ~-~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 247 (274)
+ +||+|+..+... +....+++...+.|+++|++++... ...+.+++++.++||.+++..
T Consensus 88 ~~~~D~IviaGmGg----~lI~~IL~~~~~~l~~~~~lIlqp~------------~~~~~lr~~L~~~Gf~i~~E~ 147 (230)
T 3lec_A 88 ADNIDTITICGMGG----RLIADILNNDIDKLQHVKTLVLQPN------------NREDDLRKWLAANDFEIVAED 147 (230)
T ss_dssp GGCCCEEEEEEECH----HHHHHHHHHTGGGGTTCCEEEEEES------------SCHHHHHHHHHHTTEEEEEEE
T ss_pred ccccCEEEEeCCch----HHHHHHHHHHHHHhCcCCEEEEECC------------CChHHHHHHHHHCCCEEEEEE
Confidence 3 799988655433 4456788899999999999888652 147899999999999998755
No 117
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.65 E-value=3e-15 Score=131.15 Aligned_cols=135 Identities=16% Similarity=0.134 Sum_probs=105.6
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-CCCeeEEEeccccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP-TELFDLIFDYTFFC 185 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~ 185 (274)
.++.+|||+|||+|.++..+++.+.+|+++|+++.+++.|+++...++. +++++.+|+.+... .++||+|+++.+++
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n~~~~~~--~v~~~~~D~~~~~~~~~~fD~Ii~npp~~ 309 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGLEANAL--KAQALHSDVDEALTEEARFDIIVTNPPFH 309 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHHHHHTTC--CCEEEECSTTTTSCTTCCEEEEEECCCCC
T ss_pred CCCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCC--CeEEEEcchhhccccCCCeEEEEECCchh
Confidence 3567999999999999999999889999999999999999999987764 38999999998544 47899999999988
Q ss_pred c---cChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHH------hcCCCcEEEEeecccc
Q 024021 186 A---IEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVL------QPMGFQAISIVDNKLA 252 (274)
Q Consensus 186 ~---~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~~Gf~~~~~~~~~~~ 252 (274)
+ ...+....+++.+.++|+|||.++++..... + -...+.+.+ +..||++.........
T Consensus 310 ~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l------~---~~~~l~~~f~~v~~l~~~gF~Vl~a~~~~~~ 376 (381)
T 3dmg_A 310 VGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFL------K---YEPLLEEKFGAFQTLKVAEYKVLFAEKRGRH 376 (381)
T ss_dssp TTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTS------C---HHHHHHHHHSCCEEEEESSSEEEEEECC---
T ss_pred hcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCC------C---hHHHHHHhhccEEEEeCCCEEEEEEEEeccc
Confidence 7 3346677899999999999999999874331 1 122222322 6778888877665544
No 118
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.65 E-value=1.1e-15 Score=133.94 Aligned_cols=132 Identities=17% Similarity=0.249 Sum_probs=106.5
Q ss_pred CCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccccc
Q 024021 108 PKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFC 185 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~ 185 (274)
+..+|||+|||+|..+..+++ ++.+++++|+ +.+++.|++. ++++++.+|+.+..+. ||+|++..+++
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~~~~~--~D~v~~~~~lh 278 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL-------SGIEHVGGDMFASVPQ--GDAMILKAVCH 278 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTTCCCC--EEEEEEESSGG
T ss_pred CCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc-------CCCEEEeCCcccCCCC--CCEEEEecccc
Confidence 347999999999999999987 5678999999 9888776541 4699999999884433 99999999999
Q ss_pred ccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCC------------------CcccCHHHHHHHHhcCCCcEEEEe
Q 024021 186 AIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGP------------------PYKVSVSDYEEVLQPMGFQAISIV 247 (274)
Q Consensus 186 ~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~l~~~Gf~~~~~~ 247 (274)
+++++....++++++++|+|||++++.++........+ ....+.+++.++++++||+++++.
T Consensus 279 ~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~ 358 (372)
T 1fp1_D 279 NWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLSGFSKFQVA 358 (372)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCSEEEEE
T ss_pred cCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHHHHHHCCCceEEEE
Confidence 99887777999999999999999999875433221110 122478999999999999999887
Q ss_pred ec
Q 024021 248 DN 249 (274)
Q Consensus 248 ~~ 249 (274)
..
T Consensus 359 ~~ 360 (372)
T 1fp1_D 359 CR 360 (372)
T ss_dssp EE
T ss_pred Ec
Confidence 63
No 119
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.65 E-value=4.3e-16 Score=129.03 Aligned_cols=131 Identities=15% Similarity=0.125 Sum_probs=104.2
Q ss_pred CCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC----CCCeeEEEec
Q 024021 108 PKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP----TELFDLIFDY 181 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~D~v~~~ 181 (274)
++.+|||+|||+|..+..++. ++.+|+++|+++.+++.|+++....++. +++++.+|+.+... .++||+|++.
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~-~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLK-GARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC-ceEEEECcHHHhhcccccCCCceEEEEC
Confidence 457999999999999988876 5789999999999999999999877664 59999999987432 4789999997
Q ss_pred ccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeeccccc
Q 024021 182 TFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDNKLAI 253 (274)
Q Consensus 182 ~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~ 253 (274)
.+. ....+++.+.++|+|||++++... ........++.+.++..||.+..+.....+.
T Consensus 159 a~~------~~~~ll~~~~~~LkpgG~l~~~~g--------~~~~~e~~~~~~~l~~~G~~~~~~~~~~~p~ 216 (249)
T 3g89_A 159 AVA------PLCVLSELLLPFLEVGGAAVAMKG--------PRVEEELAPLPPALERLGGRLGEVLALQLPL 216 (249)
T ss_dssp SSC------CHHHHHHHHGGGEEEEEEEEEEEC--------SCCHHHHTTHHHHHHHHTEEEEEEEEEECTT
T ss_pred CcC------CHHHHHHHHHHHcCCCeEEEEEeC--------CCcHHHHHHHHHHHHHcCCeEEEEEEeeCCC
Confidence 652 235788999999999999988662 1222235567788888999999888764443
No 120
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.65 E-value=1.2e-15 Score=124.80 Aligned_cols=133 Identities=19% Similarity=0.213 Sum_probs=98.7
Q ss_pred CCCeEEEEcCCcchhHHHhhCC-C-CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC----CCCCCCeeEEEec
Q 024021 108 PKGRALVPGCGTGYDVVAMASP-E-RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT----WCPTELFDLIFDY 181 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~-~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~D~v~~~ 181 (274)
++.+|||+|||+|..+..+++. + .+|+++|+++.+++.++++.... .++.++.+|+.. ....++||+|+.
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~~~~D~v~~- 149 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER---ENIIPILGDANKPQEYANIVEKVDVIYE- 149 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC---TTEEEEECCTTCGGGGTTTSCCEEEEEE-
T ss_pred CCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC---CCeEEEECCCCCcccccccCccEEEEEE-
Confidence 4579999999999999999874 3 69999999999999999987655 579999999987 333478999993
Q ss_pred cccccc-ChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeec
Q 024021 182 TFFCAI-EPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDN 249 (274)
Q Consensus 182 ~~~~~~-~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 249 (274)
++ .+.....+++.+.++|+|||++++...........++..+..+++. +++++||+.+.....
T Consensus 150 ----~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~~~~~~ 213 (230)
T 1fbn_A 150 ----DVAQPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGGFKIVDEVDI 213 (230)
T ss_dssp ----CCCSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEEEEEEC
T ss_pred ----ecCChhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCCCEEEEEEcc
Confidence 22 2234567799999999999999987322111111111122346777 889999998887653
No 121
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.65 E-value=8.5e-16 Score=133.66 Aligned_cols=131 Identities=14% Similarity=0.174 Sum_probs=106.8
Q ss_pred CCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccccc
Q 024021 108 PKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFC 185 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~ 185 (274)
+..+|||+|||+|..+..+++ ++.+++++|+ +.+++.|++. .+++++.+|+.+..+ .||+|++..+++
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~~~p--~~D~v~~~~~lh 257 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS-------NNLTYVGGDMFTSIP--NADAVLLKYILH 257 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB-------TTEEEEECCTTTCCC--CCSEEEEESCGG
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC-------CCcEEEeccccCCCC--CccEEEeehhhc
Confidence 347999999999999999986 5779999999 9998877642 359999999987443 399999999999
Q ss_pred ccChhHHHHHHHHHHhcccC---CcEEEEEEccCCCCCCC-----------------CCcccCHHHHHHHHhcCCCcEEE
Q 024021 186 AIEPEMRAAWAQKIKDFLKP---DGELITLMFPISDHVGG-----------------PPYKVSVSDYEEVLQPMGFQAIS 245 (274)
Q Consensus 186 ~~~~~~~~~~l~~~~~~L~p---gG~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~l~~~Gf~~~~ 245 (274)
+++++....++++++++|+| ||++++.++........ .....+.+++.++++++||+.++
T Consensus 258 ~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~~aGf~~~~ 337 (352)
T 1fp2_A 258 NWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIEAGFQHYK 337 (352)
T ss_dssp GSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHHHTTCCEEE
T ss_pred cCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHHHHHHHCCCCeeE
Confidence 99887777999999999999 99999987654332111 01224789999999999999988
Q ss_pred Eee
Q 024021 246 IVD 248 (274)
Q Consensus 246 ~~~ 248 (274)
+..
T Consensus 338 ~~~ 340 (352)
T 1fp2_A 338 ISP 340 (352)
T ss_dssp EEE
T ss_pred EEe
Confidence 866
No 122
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.64 E-value=1.9e-15 Score=119.84 Aligned_cols=108 Identities=11% Similarity=-0.044 Sum_probs=90.9
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC---CCCCCeeEEEecc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW---CPTELFDLIFDYT 182 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~D~v~~~~ 182 (274)
.++.+|||+|||+|..+..++..+. +|+++|+++.+++.|+++....+. ++++++.+|+.+. .+.++||+|+++.
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~fD~i~~~~ 121 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGL-SGATLRRGAVAAVVAAGTTSPVDLVLADP 121 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTC-SCEEEEESCHHHHHHHCCSSCCSEEEECC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCC-CceEEEEccHHHHHhhccCCCccEEEECC
Confidence 5678999999999999997777555 899999999999999999887765 6799999999873 3367899999998
Q ss_pred cccccChhHHHHHHHHHHh--cccCCcEEEEEEccC
Q 024021 183 FFCAIEPEMRAAWAQKIKD--FLKPDGELITLMFPI 216 (274)
Q Consensus 183 ~~~~~~~~~~~~~l~~~~~--~L~pgG~~~~~~~~~ 216 (274)
++++. .+....++..+.+ +|+|||.+++.....
T Consensus 122 p~~~~-~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 122 PYNVD-SADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp CTTSC-HHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred CCCcc-hhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 87753 3456788999999 999999999977544
No 123
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.64 E-value=8.5e-16 Score=124.32 Aligned_cols=130 Identities=13% Similarity=0.047 Sum_probs=100.0
Q ss_pred CCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC---CCCCCeeEEEecc
Q 024021 108 PKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW---CPTELFDLIFDYT 182 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~D~v~~~~ 182 (274)
++.+|||+|||+|..+..+++ ++.+++|+|+++.+++.|+++....+. .+++++.+|+.+. .+.+.||.|+++.
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~-~nv~~~~~d~~~l~~~~~~~~~d~v~~~~ 116 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEA-QNVKLLNIDADTLTDVFEPGEVKRVYLNF 116 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCC-SSEEEECCCGGGHHHHCCTTSCCEEEEES
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhcCcCCcCEEEEEC
Confidence 467999999999999999887 578999999999999999999877665 4699999999872 4567899998765
Q ss_pred cccccChh------HHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEee
Q 024021 183 FFCAIEPE------MRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 183 ~~~~~~~~------~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 248 (274)
...+.... ....+++.+.++|+|||.+++.+... ...+.+.+.++++||..+....
T Consensus 117 ~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~----------~~~~~~~~~~~~~g~~~~~~~~ 178 (213)
T 2fca_A 117 SDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNR----------GLFEYSLKSFSEYGLLLTYVSL 178 (213)
T ss_dssp CCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCH----------HHHHHHHHHHHHHTCEEEEEES
T ss_pred CCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCH----------HHHHHHHHHHHHCCCccccccc
Confidence 43221110 02578999999999999999876211 0235667788888998876543
No 124
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.64 E-value=3.6e-15 Score=121.84 Aligned_cols=136 Identities=11% Similarity=-0.001 Sum_probs=108.8
Q ss_pred cHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCC--CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCC
Q 024021 95 APIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPE--RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPT 172 (274)
Q Consensus 95 ~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 172 (274)
...+..+... ..++.+|||+|||+|.++..+++.+ .+|+++|+++.+++.|++++..+++.+++++..+|..+...+
T Consensus 9 s~RL~~i~~~-v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~ 87 (244)
T 3gnl_A 9 SKRLEKVASY-ITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEK 87 (244)
T ss_dssp CHHHHHHHTT-CCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG
T ss_pred hHHHHHHHHh-CCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCc
Confidence 3444444443 3456799999999999999999865 389999999999999999999998888899999999986554
Q ss_pred C-CeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEe
Q 024021 173 E-LFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIV 247 (274)
Q Consensus 173 ~-~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 247 (274)
+ +||+|+..+... +....+++...+.|++++++++.-. ...+.+.++|.+.||.+++..
T Consensus 88 ~~~~D~IviagmGg----~lI~~IL~~~~~~L~~~~~lIlq~~------------~~~~~lr~~L~~~Gf~i~~E~ 147 (244)
T 3gnl_A 88 KDAIDTIVIAGMGG----TLIRTILEEGAAKLAGVTKLILQPN------------IAAWQLREWSEQNNWLITSEA 147 (244)
T ss_dssp GGCCCEEEEEEECH----HHHHHHHHHTGGGGTTCCEEEEEES------------SCHHHHHHHHHHHTEEEEEEE
T ss_pred cccccEEEEeCCch----HHHHHHHHHHHHHhCCCCEEEEEcC------------CChHHHHHHHHHCCCEEEEEE
Confidence 4 599998644433 4556788999999999999888652 147899999999999986543
No 125
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.64 E-value=3.4e-16 Score=139.19 Aligned_cols=147 Identities=17% Similarity=0.177 Sum_probs=108.1
Q ss_pred HHHHHhcCC-CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceE-EEEcccCC-CCCCCC
Q 024021 98 IVHLHQSGA-LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVS-FLKADFFT-WCPTEL 174 (274)
Q Consensus 98 ~~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~-~~~~d~~~-~~~~~~ 174 (274)
...++.... .++.+|||+|||+|.++..+++.+.+++|+|+++.+++.|+++. ...... +...+... ..+.++
T Consensus 96 ~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~a~~~~----~~~~~~~~~~~~~~~l~~~~~~ 171 (416)
T 4e2x_A 96 ARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKAREKG----IRVRTDFFEKATADDVRRTEGP 171 (416)
T ss_dssp HHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHHHHTTT----CCEECSCCSHHHHHHHHHHHCC
T ss_pred HHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHHHHHcC----CCcceeeechhhHhhcccCCCC
Confidence 344444443 34579999999999999999998899999999999999998762 111111 11222222 233578
Q ss_pred eeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCC--------CC-CCCCCcccCHHHHHHHHhcCCCcEEE
Q 024021 175 FDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPIS--------DH-VGGPPYKVSVSDYEEVLQPMGFQAIS 245 (274)
Q Consensus 175 ~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~--------~~-~~~~~~~~~~~~~~~~l~~~Gf~~~~ 245 (274)
||+|++.++++|++ +...+++++.++|+|||++++...... .. .......++.+++.++++++||+++.
T Consensus 172 fD~I~~~~vl~h~~--d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~ 249 (416)
T 4e2x_A 172 ANVIYAANTLCHIP--YVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELVD 249 (416)
T ss_dssp EEEEEEESCGGGCT--THHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEE
T ss_pred EEEEEECChHHhcC--CHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEE
Confidence 99999999999996 457899999999999999998764311 00 11223346899999999999999999
Q ss_pred Eeecc
Q 024021 246 IVDNK 250 (274)
Q Consensus 246 ~~~~~ 250 (274)
+....
T Consensus 250 ~~~~~ 254 (416)
T 4e2x_A 250 VQRLP 254 (416)
T ss_dssp EEEEC
T ss_pred EEEcc
Confidence 87754
No 126
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.63 E-value=2.9e-15 Score=124.85 Aligned_cols=130 Identities=18% Similarity=0.157 Sum_probs=101.7
Q ss_pred CCCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhc---CCCCcceEEEEcccCCC--------CCCC
Q 024021 107 LPKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSS---LPNAKFVSFLKADFFTW--------CPTE 173 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~---~~~~~~~~~~~~d~~~~--------~~~~ 173 (274)
.++.+|||+|||+|.++..++. ++.+|+++|+++.+++.|++++.. +++.++++++.+|+.+. .+.+
T Consensus 35 ~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 114 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDE 114 (260)
T ss_dssp CSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTT
T ss_pred cCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCC
Confidence 3457999999999999998887 357999999999999999999988 77767899999999875 3467
Q ss_pred CeeEEEecccccccC----------------hhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHh
Q 024021 174 LFDLIFDYTFFCAIE----------------PEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQ 237 (274)
Q Consensus 174 ~~D~v~~~~~~~~~~----------------~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 237 (274)
+||+|+++.++.... ......+++.+.++|+|||.+++..... ...++.+.++
T Consensus 115 ~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-----------~~~~~~~~l~ 183 (260)
T 2ozv_A 115 HFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQ-----------SVAEIIAACG 183 (260)
T ss_dssp CEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGG-----------GHHHHHHHHT
T ss_pred CcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHH-----------HHHHHHHHHH
Confidence 899999986664321 1124678999999999999999875221 4567888888
Q ss_pred cCCCcEEEEee
Q 024021 238 PMGFQAISIVD 248 (274)
Q Consensus 238 ~~Gf~~~~~~~ 248 (274)
+. |..+.+..
T Consensus 184 ~~-~~~~~i~~ 193 (260)
T 2ozv_A 184 SR-FGGLEITL 193 (260)
T ss_dssp TT-EEEEEEEE
T ss_pred hc-CCceEEEE
Confidence 75 77666544
No 127
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.63 E-value=9.4e-17 Score=129.40 Aligned_cols=130 Identities=15% Similarity=0.116 Sum_probs=84.9
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCC-----CCeeEEE
Q 024021 107 LPKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPT-----ELFDLIF 179 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-----~~~D~v~ 179 (274)
.++.+|||+|||+|..+..+++. +.+++++|+++.+++.|+++....+. +++++.+|+.+..+. ++||+|+
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~fD~i~ 106 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA--VVDWAAADGIEWLIERAERGRPWHAIV 106 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC---------------------CCHHHHHHHHHHHHHTTCCBSEEE
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC--ceEEEEcchHhhhhhhhhccCcccEEE
Confidence 45679999999999999999884 66999999999999999999877654 689999999874444 7899999
Q ss_pred ecccccccC------hhH------------------HHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHH
Q 024021 180 DYTFFCAIE------PEM------------------RAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEV 235 (274)
Q Consensus 180 ~~~~~~~~~------~~~------------------~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (274)
++.++.... ... ...+++.+.++|+|||++++...+. ...+++.++
T Consensus 107 ~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~----------~~~~~~~~~ 176 (215)
T 4dzr_A 107 SNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGH----------NQADEVARL 176 (215)
T ss_dssp ECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTT----------SCHHHHHHH
T ss_pred ECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECC----------ccHHHHHHH
Confidence 987664321 111 1678899999999999955554332 157889999
Q ss_pred Hh--cCCCcEEEEee
Q 024021 236 LQ--PMGFQAISIVD 248 (274)
Q Consensus 236 l~--~~Gf~~~~~~~ 248 (274)
++ ++||..+.+..
T Consensus 177 l~~~~~gf~~~~~~~ 191 (215)
T 4dzr_A 177 FAPWRERGFRVRKVK 191 (215)
T ss_dssp TGGGGGGTEECCEEE
T ss_pred HHHhhcCCceEEEEE
Confidence 99 99997766544
No 128
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.63 E-value=2.9e-16 Score=128.13 Aligned_cols=146 Identities=13% Similarity=0.092 Sum_probs=97.3
Q ss_pred CCCCCeEEEEcCCcchhHHHhh--CCCCeEEEEeCC-hHHHHHH---HHHhhcCCCCcceEEEEcccCCCCC--CCCeeE
Q 024021 106 ALPKGRALVPGCGTGYDVVAMA--SPERYVVGLEIS-DIAIKKA---EELSSSLPNAKFVSFLKADFFTWCP--TELFDL 177 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~--~~~~~v~~vD~~-~~~~~~a---~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~D~ 177 (274)
..++.+|||+|||+|..+..++ .++.+|+|+|+| +.+++.| +++....+. .++.++.+|+..... .+.+|.
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~-~~v~~~~~d~~~l~~~~~d~v~~ 100 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGL-SNVVFVIAAAESLPFELKNIADS 100 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCC-SSEEEECCBTTBCCGGGTTCEEE
T ss_pred CCCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCC-CCeEEEEcCHHHhhhhccCeEEE
Confidence 4566899999999999999998 477899999999 6666665 777666554 469999999987521 245666
Q ss_pred EEecccccccCh---hHHHHHHHHHHhcccCCcEEEEEEccCCCC------CCCCCcc----cCHHHHHHHHhcCCCcEE
Q 024021 178 IFDYTFFCAIEP---EMRAAWAQKIKDFLKPDGELITLMFPISDH------VGGPPYK----VSVSDYEEVLQPMGFQAI 244 (274)
Q Consensus 178 v~~~~~~~~~~~---~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~------~~~~~~~----~~~~~~~~~l~~~Gf~~~ 244 (274)
|+++..+..... .....++.++.++|||||.+++........ ..+.+.. +..+++.++++++||++.
T Consensus 101 i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~aGf~v~ 180 (225)
T 3p2e_A 101 ISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEIKKRGLPLLSKAYFLSEQYKAELSNSGFRID 180 (225)
T ss_dssp EEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC--------------CCHHHHHSHHHHHHHHHHTCEEE
T ss_pred EEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhchhhhcCCCCCChhhcchHHHHHHHHHcCCCee
Confidence 665544332100 011467899999999999998833211110 0111111 112249999999999999
Q ss_pred EEeecccc
Q 024021 245 SIVDNKLA 252 (274)
Q Consensus 245 ~~~~~~~~ 252 (274)
........
T Consensus 181 ~~~~~~~~ 188 (225)
T 3p2e_A 181 DVKELDNE 188 (225)
T ss_dssp EEEEECHH
T ss_pred eeeecCHH
Confidence 98876643
No 129
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.61 E-value=9e-16 Score=127.38 Aligned_cols=125 Identities=20% Similarity=0.112 Sum_probs=103.8
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC---CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASP---ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTF 183 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~ 183 (274)
.++.+|||+|||+|.++..+++. +.+++++|+++.+++.|++++...+..++++++.+|+.+..+.++||+|++...
T Consensus 92 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~~~~~ 171 (255)
T 3mb5_A 92 SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEEENVDHVILDLP 171 (255)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCCCSEEEEEECSS
T ss_pred CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCCCCcCEEEECCC
Confidence 45679999999999999999874 779999999999999999998877766679999999998777788999997422
Q ss_pred ccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCC--CcEEEEee
Q 024021 184 FCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMG--FQAISIVD 248 (274)
Q Consensus 184 ~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G--f~~~~~~~ 248 (274)
....+++.+.++|+|||.+++..... ...+++.+.++++| |..+++..
T Consensus 172 -------~~~~~l~~~~~~L~~gG~l~~~~~~~----------~~~~~~~~~l~~~g~~f~~~~~~e 221 (255)
T 3mb5_A 172 -------QPERVVEHAAKALKPGGFFVAYTPCS----------NQVMRLHEKLREFKDYFMKPRTIN 221 (255)
T ss_dssp -------CGGGGHHHHHHHEEEEEEEEEEESSH----------HHHHHHHHHHHHTGGGBSCCEEEC
T ss_pred -------CHHHHHHHHHHHcCCCCEEEEEECCH----------HHHHHHHHHHHHcCCCccccEEEE
Confidence 12457899999999999999876322 14678889999999 98877654
No 130
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.61 E-value=1.3e-14 Score=122.29 Aligned_cols=135 Identities=10% Similarity=0.061 Sum_probs=99.1
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeC-ChHHHHHHHHHh-----hcCCCC----cceEEEEcccCCC---C--
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPER-YVVGLEI-SDIAIKKAEELS-----SSLPNA----KFVSFLKADFFTW---C-- 170 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~-~~~~~~~a~~~~-----~~~~~~----~~~~~~~~d~~~~---~-- 170 (274)
.++.+|||+|||+|..+..+++.+. +|+++|+ ++.+++.|+++. ...+.. +++++...|..+. .
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 157 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQR 157 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHH
T ss_pred cCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHh
Confidence 4567999999999999999988777 9999999 899999999998 444433 3688887665441 1
Q ss_pred --CCCCeeEEEecccccccChhHHHHHHHHHHhccc---C--CcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCC-Cc
Q 024021 171 --PTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLK---P--DGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMG-FQ 242 (274)
Q Consensus 171 --~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~---p--gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-f~ 242 (274)
+.++||+|++..++++. +....+++.+.++|+ | ||.+++...... +.......++.+.++++| |.
T Consensus 158 ~~~~~~fD~Ii~~dvl~~~--~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~-----~~~~~~~~~~~~~l~~~G~f~ 230 (281)
T 3bzb_A 158 CTGLQRFQVVLLADLLSFH--QAHDALLRSVKMLLALPANDPTAVALVTFTHHR-----PHLAERDLAFFRLVNADGALI 230 (281)
T ss_dssp HHSCSSBSEEEEESCCSCG--GGHHHHHHHHHHHBCCTTTCTTCEEEEEECC-------------CTHHHHHHHHSTTEE
T ss_pred hccCCCCCEEEEeCcccCh--HHHHHHHHHHHHHhcccCCCCCCEEEEEEEeee-----cccchhHHHHHHHHHhcCCEE
Confidence 35789999998888775 445788999999999 9 998877543221 011113467778899999 99
Q ss_pred EEEEee
Q 024021 243 AISIVD 248 (274)
Q Consensus 243 ~~~~~~ 248 (274)
+..+..
T Consensus 231 v~~~~~ 236 (281)
T 3bzb_A 231 AEPWLS 236 (281)
T ss_dssp EEEEEC
T ss_pred EEEecc
Confidence 988744
No 131
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.61 E-value=5.1e-15 Score=121.28 Aligned_cols=102 Identities=19% Similarity=0.200 Sum_probs=87.4
Q ss_pred CCCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC---CCCeeEEEec
Q 024021 107 LPKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP---TELFDLIFDY 181 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~D~v~~~ 181 (274)
.++.+|||+|||+|..+..+++ ++.+|+++|+++.+++.|++++...+..++++++.+|+.+..+ .++||+|++.
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~ 149 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFID 149 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEE
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEc
Confidence 3568999999999999999998 6789999999999999999999888777789999999987543 6789999976
Q ss_pred ccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024021 182 TFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 182 ~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 213 (274)
.... ....+++.+.++|+|||++++..
T Consensus 150 ~~~~-----~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 150 AAKA-----QSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp TTSS-----SHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CcHH-----HHHHHHHHHHHhcCCCeEEEEee
Confidence 5432 34568999999999999998844
No 132
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.61 E-value=1.8e-15 Score=127.22 Aligned_cols=124 Identities=18% Similarity=0.180 Sum_probs=101.9
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC---CCeEEEEeCChHHHHHHHHHhhcC-CCCcceEEEEcccCCCCCCCCeeEEEecc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASP---ERYVVGLEISDIAIKKAEELSSSL-PNAKFVSFLKADFFTWCPTELFDLIFDYT 182 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~D~v~~~~ 182 (274)
.++.+|||+|||+|..+..+++. +.+|+++|+++.+++.|+++.... + .+++++..+|+.+..+.++||+|++.
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g-~~~v~~~~~d~~~~~~~~~fD~Vi~~- 186 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYD-IGNVRTSRSDIADFISDQMYDAVIAD- 186 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSC-CTTEEEECSCTTTCCCSCCEEEEEEC-
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCC-CCcEEEEECchhccCcCCCccEEEEc-
Confidence 45579999999999999988874 789999999999999999998776 5 35799999999886666789999972
Q ss_pred cccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEee
Q 024021 183 FFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 183 ~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 248 (274)
++. ...+++.+.++|+|||++++.+... ...+++.+.++++||..++...
T Consensus 187 ----~~~--~~~~l~~~~~~LkpgG~l~i~~~~~----------~~~~~~~~~l~~~Gf~~~~~~~ 236 (275)
T 1yb2_A 187 ----IPD--PWNHVQKIASMMKPGSVATFYLPNF----------DQSEKTVLSLSASGMHHLETVE 236 (275)
T ss_dssp ----CSC--GGGSHHHHHHTEEEEEEEEEEESSH----------HHHHHHHHHSGGGTEEEEEEEE
T ss_pred ----CcC--HHHHHHHHHHHcCCCCEEEEEeCCH----------HHHHHHHHHHHHCCCeEEEEEE
Confidence 222 2467899999999999999987322 1357788889999999888765
No 133
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.60 E-value=8.1e-15 Score=118.01 Aligned_cols=100 Identities=22% Similarity=0.142 Sum_probs=87.0
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-CCCCCeeEEEeccccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-CPTELFDLIFDYTFFC 185 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~~~ 185 (274)
.++.+|||+|||+|..+..+++.+.+|+++|+++.+++.|+++....+.. +++++.+|..+. ...++||+|++..+++
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~~D~i~~~~~~~ 154 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLDLH-NVSTRHGDGWQGWQARAPFDAIIVTAAPP 154 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCGGGCCEEEEEESSBCS
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCC-ceEEEECCcccCCccCCCccEEEEccchh
Confidence 45689999999999999999888889999999999999999998876654 699999999873 3457899999999999
Q ss_pred ccChhHHHHHHHHHHhcccCCcEEEEEEcc
Q 024021 186 AIEPEMRAAWAQKIKDFLKPDGELITLMFP 215 (274)
Q Consensus 186 ~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 215 (274)
++++ .+.++|+|||++++....
T Consensus 155 ~~~~--------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 155 EIPT--------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp SCCT--------HHHHTEEEEEEEEEEECS
T ss_pred hhhH--------HHHHhcccCcEEEEEEcC
Confidence 8863 478999999999998754
No 134
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.60 E-value=3.6e-15 Score=120.50 Aligned_cols=112 Identities=14% Similarity=0.094 Sum_probs=92.5
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCCCCeeEEEeccccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPTELFDLIFDYTFFC 185 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~v~~~~~~~ 185 (274)
.++.+|||+|||+|.++..++ .+++++|+++. ++++..+|+.+ ..+.++||+|++..+++
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~---~~v~~~D~s~~----------------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 126 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR---NPVHCFDLASL----------------DPRVTVCDMAQVPLEDESVDVAVFCLSLM 126 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC---SCEEEEESSCS----------------STTEEESCTTSCSCCTTCEEEEEEESCCC
T ss_pred CCCCeEEEECCcCCHHHHHhh---ccEEEEeCCCC----------------CceEEEeccccCCCCCCCEeEEEEehhcc
Confidence 456799999999999998883 68999999986 36788999887 34567899999999986
Q ss_pred ccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEee
Q 024021 186 AIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 186 ~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 248 (274)
+ .....+++++.++|+|||.+++.++... ..+.+++.++++++||+++....
T Consensus 127 ~---~~~~~~l~~~~~~L~~gG~l~i~~~~~~--------~~~~~~~~~~l~~~Gf~~~~~~~ 178 (215)
T 2zfu_A 127 G---TNIRDFLEEANRVLKPGGLLKVAEVSSR--------FEDVRTFLRAVTKLGFKIVSKDL 178 (215)
T ss_dssp S---SCHHHHHHHHHHHEEEEEEEEEEECGGG--------CSCHHHHHHHHHHTTEEEEEEEC
T ss_pred c---cCHHHHHHHHHHhCCCCeEEEEEEcCCC--------CCCHHHHHHHHHHCCCEEEEEec
Confidence 4 3446889999999999999999875432 12789999999999999988654
No 135
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.60 E-value=2.4e-14 Score=116.74 Aligned_cols=135 Identities=19% Similarity=0.162 Sum_probs=93.0
Q ss_pred CCCCeEEEEcCCcchhHHHhhC---CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC----CCCCeeEEE
Q 024021 107 LPKGRALVPGCGTGYDVVAMAS---PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC----PTELFDLIF 179 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~D~v~ 179 (274)
.++.+|||+|||+|..+..+++ +..+|+++|+++.++....+..... .++.++.+|+..+. ..++||+|+
T Consensus 75 ~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r---~nv~~i~~Da~~~~~~~~~~~~~D~I~ 151 (232)
T 3id6_C 75 RKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR---PNIFPLLADARFPQSYKSVVENVDVLY 151 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC---TTEEEEECCTTCGGGTTTTCCCEEEEE
T ss_pred CCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc---CCeEEEEcccccchhhhccccceEEEE
Confidence 4568999999999999998876 4569999999998875444433322 46999999998632 246899999
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeec
Q 024021 180 DYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDN 249 (274)
Q Consensus 180 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 249 (274)
+.... +.....+...+.++|+|||++++..........-.+.. ..++..+.++++||++++....
T Consensus 152 ~d~a~----~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e-~~~~~~~~L~~~gf~~~~~~~l 216 (232)
T 3id6_C 152 VDIAQ----PDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKE-IYKTEVEKLENSNFETIQIINL 216 (232)
T ss_dssp ECCCC----TTHHHHHHHHHHHHEEEEEEEEEEEC-------CCSSS-STTHHHHHHHHTTEEEEEEEEC
T ss_pred ecCCC----hhHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHH-HHHHHHHHHHHCCCEEEEEecc
Confidence 87654 23334455666779999999999865443221111222 2355667888899999887764
No 136
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.60 E-value=5.8e-15 Score=122.94 Aligned_cols=142 Identities=20% Similarity=0.197 Sum_probs=106.7
Q ss_pred HHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-CCCCCee
Q 024021 98 IVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-CPTELFD 176 (274)
Q Consensus 98 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~D 176 (274)
+..++.....++.+|||+|||+|.++..+++.+.+++++|+++.+++.++++.. . .++.+|+.+. .+.++||
T Consensus 44 ~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~-----~--~~~~~d~~~~~~~~~~fD 116 (260)
T 2avn_A 44 IGSFLEEYLKNPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAREKGV-----K--NVVEAKAEDLPFPSGAFE 116 (260)
T ss_dssp HHHHHHHHCCSCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHHTC-----S--CEEECCTTSCCSCTTCEE
T ss_pred HHHHHHHhcCCCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHHHHHHHHhhcC-----C--CEEECcHHHCCCCCCCEE
Confidence 334443322367899999999999999999988999999999999999998864 1 2788898873 4567899
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCC---------CC--------CCC------C-----CcccC
Q 024021 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPIS---------DH--------VGG------P-----PYKVS 228 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~---------~~--------~~~------~-----~~~~~ 228 (274)
+|++..++.++.++ ...+++++.++|+|||.+++...+.. .. ..+ . ...++
T Consensus 117 ~v~~~~~~~~~~~~-~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (260)
T 2avn_A 117 AVLALGDVLSYVEN-KDKAFSEIRRVLVPDGLLIATVDNFYTFLQQMIEKDAWDQITRFLKTQTTSVGTTLFSFNSYAFK 195 (260)
T ss_dssp EEEECSSHHHHCSC-HHHHHHHHHHHEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHHHHHHCEEEEECSSEEEEEECBC
T ss_pred EEEEcchhhhcccc-HHHHHHHHHHHcCCCeEEEEEeCChHHHHHHhhcchhHHHHHHHHhccccccCCCceeEEEeccC
Confidence 99998877666333 67899999999999999998765432 00 000 0 01357
Q ss_pred HHHHHHHHhcCCCcEEEEeecc
Q 024021 229 VSDYEEVLQPMGFQAISIVDNK 250 (274)
Q Consensus 229 ~~~~~~~l~~~Gf~~~~~~~~~ 250 (274)
.+++.++ +||+++.+....
T Consensus 196 ~~~l~~l---aGf~~~~~~~~~ 214 (260)
T 2avn_A 196 PEDLDSL---EGFETVDIRGIG 214 (260)
T ss_dssp GGGGSSC---TTEEEEEEEEEC
T ss_pred HHHHHHh---cCceEEEEECCC
Confidence 8888777 899998877644
No 137
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.60 E-value=5.9e-15 Score=125.73 Aligned_cols=137 Identities=15% Similarity=0.100 Sum_probs=100.7
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhc---CCCCcceEEEEcccCCCC---CCCCeeEE
Q 024021 107 LPKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSS---LPNAKFVSFLKADFFTWC---PTELFDLI 178 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~---~~~~~~~~~~~~d~~~~~---~~~~~D~v 178 (274)
.++.+|||+|||+|..+..+++. ..+|+++|+++.+++.|+++++. ....++++++.+|+.+.. +.++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 34579999999999999999874 56999999999999999998732 112357999999998732 46789999
Q ss_pred EecccccccChhHH--HHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeec
Q 024021 179 FDYTFFCAIEPEMR--AAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDN 249 (274)
Q Consensus 179 ~~~~~~~~~~~~~~--~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 249 (274)
++.......+.... ..+++.+.++|+|||++++....... ......++.+.++++||..+.....
T Consensus 174 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~------~~~~~~~~~~~l~~~GF~~v~~~~~ 240 (304)
T 3bwc_A 174 IIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWL------DLELIEKMSRFIRETGFASVQYALM 240 (304)
T ss_dssp EEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTT------CHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCccc------chHHHHHHHHHHHhCCCCcEEEEEe
Confidence 99766544332222 57899999999999999987532210 1124678899999999998876543
No 138
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.60 E-value=1.8e-14 Score=117.45 Aligned_cols=133 Identities=17% Similarity=0.178 Sum_probs=97.9
Q ss_pred CCCeEEEEcCCcchhHHHhhCC---CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC----CCCCCeeEEEe
Q 024021 108 PKGRALVPGCGTGYDVVAMASP---ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW----CPTELFDLIFD 180 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~----~~~~~~D~v~~ 180 (274)
++.+|||+|||+|.++..+++. +.+|+++|+++.+++.++++.... .+++++.+|+.+. ...++||+|++
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~~~D~v~~ 149 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER---RNIVPILGDATKPEEYRALVPKVDVIFE 149 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC---TTEEEEECCTTCGGGGTTTCCCEEEEEE
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc---CCCEEEEccCCCcchhhcccCCceEEEE
Confidence 4579999999999999998863 479999999999999999988665 5799999999872 22458999997
Q ss_pred cccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeec
Q 024021 181 YTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDN 249 (274)
Q Consensus 181 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 249 (274)
... .+.....++..+.++|+|||.+++...........++..+..+++.++ +++ |++++....
T Consensus 150 ~~~----~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~-f~~~~~~~~ 212 (227)
T 1g8a_A 150 DVA----QPTQAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVFREVEREL-SEY-FEVIERLNL 212 (227)
T ss_dssp CCC----STTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCTTSCHHHHHHHHHHHH-HTT-SEEEEEEEC
T ss_pred CCC----CHhHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCChhhhhHHHHHHH-Hhh-ceeeeEecc
Confidence 654 223334568999999999999988732222111111222345677776 777 998877664
No 139
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.60 E-value=3.7e-15 Score=122.13 Aligned_cols=132 Identities=16% Similarity=0.169 Sum_probs=96.5
Q ss_pred CCCeEEEEcCCcchhHHHhhCC---CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC----CCCCeeEEEe
Q 024021 108 PKGRALVPGCGTGYDVVAMASP---ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC----PTELFDLIFD 180 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~D~v~~ 180 (274)
++.+|||+|||+|.++..+++. +.+|+++|+++.+++.+.++.... .+++++.+|+.+.. ..++||+|++
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~~~~~D~V~~ 153 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR---TNIIPVIEDARHPHKYRMLIAMVDVIFA 153 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC---TTEEEECSCTTCGGGGGGGCCCEEEEEE
T ss_pred CCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc---CCeEEEEcccCChhhhcccCCcEEEEEE
Confidence 4579999999999999999873 479999999999888777776554 46999999998732 3568999998
Q ss_pred cccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCc-ccCHHHHHHHHhcCCCcEEEEee
Q 024021 181 YTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPY-KVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 181 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~Gf~~~~~~~ 248 (274)
..+ .++....++.++.++|+|||++++........ .+.+. ..-.++ .++|+++||+++....
T Consensus 154 ~~~----~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~-~~~~~~~~~~~~-~~~l~~~Gf~~~~~~~ 216 (233)
T 2ipx_A 154 DVA----QPDQTRIVALNAHTFLRNGGHFVISIKANCID-STASAEAVFASE-VKKMQQENMKPQEQLT 216 (233)
T ss_dssp CCC----CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHC-SSSCHHHHHHHH-HHTTGGGTEEEEEEEE
T ss_pred cCC----CccHHHHHHHHHHHHcCCCeEEEEEEcccccc-cCCCHHHHHHHH-HHHHHHCCCceEEEEe
Confidence 655 22344567888999999999999965442111 11111 111123 5889999999988655
No 140
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.59 E-value=2.8e-15 Score=120.16 Aligned_cols=106 Identities=14% Similarity=0.148 Sum_probs=86.7
Q ss_pred CCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCC-cceEEEEcccCCCC---CCCC-eeEEEec
Q 024021 108 PKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNA-KFVSFLKADFFTWC---PTEL-FDLIFDY 181 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~-~~~~~~~~d~~~~~---~~~~-~D~v~~~ 181 (274)
++.+|||+|||+|.++..++..+. +|+++|+++.+++.|+++....+.. ++++++.+|+.+.. +.++ ||+|++.
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 468999999999999998766554 8999999999999999999887653 57999999987732 2468 9999998
Q ss_pred ccccccChhHHHHHHHHH--HhcccCCcEEEEEEccC
Q 024021 182 TFFCAIEPEMRAAWAQKI--KDFLKPDGELITLMFPI 216 (274)
Q Consensus 182 ~~~~~~~~~~~~~~l~~~--~~~L~pgG~~~~~~~~~ 216 (274)
.+++ . .....+++.+ .++|+|||.+++.....
T Consensus 133 ~~~~-~--~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 133 PPFH-F--NLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp CCSS-S--CHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred CCCC-C--ccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 8854 2 3456778888 67899999999877544
No 141
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.59 E-value=5.7e-15 Score=119.14 Aligned_cols=131 Identities=19% Similarity=0.125 Sum_probs=92.8
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC----CCCCCeeEEEe
Q 024021 107 LPKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW----CPTELFDLIFD 180 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~----~~~~~~D~v~~ 180 (274)
.++.+|||+|||+|..+..+++. +.+|+|+|+|+.+++.+.+..... .++.++.+|+... ...++||+|++
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~~~~fD~V~~ 132 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER---NNIIPLLFDASKPWKYSGIVEKVDLIYQ 132 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC---SSEEEECSCTTCGGGTTTTCCCEEEEEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC---CCeEEEEcCCCCchhhcccccceeEEEE
Confidence 35679999999999999988773 369999999999876665554433 3688888988763 23478999998
Q ss_pred cccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHH----HHHhcCCCcEEEEeecc
Q 024021 181 YTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYE----EVLQPMGFQAISIVDNK 250 (274)
Q Consensus 181 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~Gf~~~~~~~~~ 250 (274)
+.. ++.....++.++.++|||||++++....... ....+++++. +.++++ |++++.....
T Consensus 133 ~~~----~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~-----~~~~~~~~~~~~~~~~l~~~-f~~~~~~~~~ 196 (210)
T 1nt2_A 133 DIA----QKNQIEILKANAEFFLKEKGEVVIMVKARSI-----DSTAEPEEVFKSVLKEMEGD-FKIVKHGSLM 196 (210)
T ss_dssp CCC----STTHHHHHHHHHHHHEEEEEEEEEEEEHHHH-----CTTSCHHHHHHHHHHHHHTT-SEEEEEEECT
T ss_pred ecc----ChhHHHHHHHHHHHHhCCCCEEEEEEecCCc-----cccCCHHHHHHHHHHHHHhh-cEEeeeecCC
Confidence 731 2234445689999999999999988533210 0112344542 337888 9998887653
No 142
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.59 E-value=8.9e-15 Score=125.96 Aligned_cols=129 Identities=15% Similarity=0.053 Sum_probs=98.9
Q ss_pred CCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCc-ceEEEEcccCCCCC-----CCCeeEEEec
Q 024021 108 PKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAK-FVSFLKADFFTWCP-----TELFDLIFDY 181 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-~~~~~~~d~~~~~~-----~~~~D~v~~~ 181 (274)
++.+|||+|||+|.++..+++.+++|+++|+++.+++.|++++..+++.+ +++++.+|+.+..+ .++||+|++.
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~d 232 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILTD 232 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEEC
T ss_pred CCCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEEC
Confidence 45799999999999999999888899999999999999999998776654 59999999987432 4689999997
Q ss_pred ccccccC--------hhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHh----cCCCcEE
Q 024021 182 TFFCAIE--------PEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQ----PMGFQAI 244 (274)
Q Consensus 182 ~~~~~~~--------~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~Gf~~~ 244 (274)
....... ......++..+.++|+|||.+++...... ..+.+.+.++++ .+|+.+.
T Consensus 233 PP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~--------~~~~~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 233 PPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSI--------RASFYSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp CCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCT--------TSCHHHHHHHHHHHTTTSCSEEE
T ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCC--------CCCHHHHHHHHHHHHHHcCCeEE
Confidence 6532211 13456889999999999999777653321 224445555444 7888876
No 143
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.59 E-value=1.4e-14 Score=126.83 Aligned_cols=115 Identities=16% Similarity=0.151 Sum_probs=92.3
Q ss_pred HHHhcCC-CCCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhcCCCCc--ceEEEEcccCCCCCCCC
Q 024021 100 HLHQSGA-LPKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSSLPNAK--FVSFLKADFFTWCPTEL 174 (274)
Q Consensus 100 ~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~--~~~~~~~d~~~~~~~~~ 174 (274)
.++.... .++.+|||+|||+|.++..+++. +.+|+++|+++.+++.++++...++..+ +++|..+|+.+..+.++
T Consensus 213 ~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~~~~ 292 (375)
T 4dcm_A 213 FFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFR 292 (375)
T ss_dssp HHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCCTTC
T ss_pred HHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCCCCC
Confidence 3444443 33479999999999999999884 7899999999999999999988766432 58889999998777789
Q ss_pred eeEEEecccccc---cChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 175 FDLIFDYTFFCA---IEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 175 ~D~v~~~~~~~~---~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
||+|+++.++++ +.......+++.+.++|+|||.++++..
T Consensus 293 fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n 335 (375)
T 4dcm_A 293 FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVAN 335 (375)
T ss_dssp EEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEE
Confidence 999999998875 3334445789999999999999999763
No 144
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.59 E-value=1.6e-15 Score=127.34 Aligned_cols=159 Identities=11% Similarity=0.026 Sum_probs=108.9
Q ss_pred HHHHHHhcC--CCCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEE-EEcccCCC---
Q 024021 97 IIVHLHQSG--ALPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSF-LKADFFTW--- 169 (274)
Q Consensus 97 ~~~~~~~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~-~~~d~~~~--- 169 (274)
.+...+... ..++.+|||+|||||.++..+++.|+ +|+|+|+++.|++.+.++. .++.. ...|+...
T Consensus 72 Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~------~rv~~~~~~ni~~l~~~ 145 (291)
T 3hp7_A 72 KLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQD------DRVRSMEQYNFRYAEPV 145 (291)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTC------TTEEEECSCCGGGCCGG
T ss_pred HHHHHHHhcCCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC------cccceecccCceecchh
Confidence 344444443 33567999999999999999888775 9999999999998865432 22322 22333321
Q ss_pred -CCCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC---C---CCCC-----cccCHHHHHHHHh
Q 024021 170 -CPTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH---V---GGPP-----YKVSVSDYEEVLQ 237 (274)
Q Consensus 170 -~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~---~---~~~~-----~~~~~~~~~~~l~ 237 (274)
.+...||+|++..+++++ ..++..+.++|+|||.+++...+..+. . .|.. +....+++.++++
T Consensus 146 ~l~~~~fD~v~~d~sf~sl-----~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~ 220 (291)
T 3hp7_A 146 DFTEGLPSFASIDVSFISL-----NLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAV 220 (291)
T ss_dssp GCTTCCCSEEEECCSSSCG-----GGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHH
T ss_pred hCCCCCCCEEEEEeeHhhH-----HHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHH
Confidence 233459999998887765 467899999999999999874332211 1 1221 1136788999999
Q ss_pred cCCCcEEEEeecccccCCccchhHHHHhhhh
Q 024021 238 PMGFQAISIVDNKLAIGPRKGREKLGRWKRS 268 (274)
Q Consensus 238 ~~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (274)
++||.+..+... ++.+..++..+..|.+.
T Consensus 221 ~~Gf~v~~~~~s--pi~g~~gn~e~l~~~~~ 249 (291)
T 3hp7_A 221 DYGFSVKGLDFS--PIQGGHGNIEFLAHLEK 249 (291)
T ss_dssp HTTEEEEEEEEC--SSCCGGGCCCEEEEEEE
T ss_pred HCCCEEEEEEEC--CCCCCCcCHHHHHHhhh
Confidence 999999888774 44454566666666554
No 145
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.59 E-value=7.3e-15 Score=128.03 Aligned_cols=131 Identities=15% Similarity=0.193 Sum_probs=105.9
Q ss_pred CCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccccc
Q 024021 108 PKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFC 185 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~ 185 (274)
+..+|||+|||+|..+..+++ ++.+++++|+ +.+++.+++ . .+++++.+|+++..+ .||+|++..+++
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~---~~v~~~~~d~~~~~~--~~D~v~~~~vlh 262 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG----N---ENLNFVGGDMFKSIP--SADAVLLKWVLH 262 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC----C---SSEEEEECCTTTCCC--CCSEEEEESCGG
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc----C---CCcEEEeCccCCCCC--CceEEEEccccc
Confidence 347999999999999999987 5679999999 788776653 1 359999999987433 499999999999
Q ss_pred ccChhHHHHHHHHHHhcccC---CcEEEEEEccCCCCCCCC------------------CcccCHHHHHHHHhcCCCcEE
Q 024021 186 AIEPEMRAAWAQKIKDFLKP---DGELITLMFPISDHVGGP------------------PYKVSVSDYEEVLQPMGFQAI 244 (274)
Q Consensus 186 ~~~~~~~~~~l~~~~~~L~p---gG~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~l~~~Gf~~~ 244 (274)
+++++....+++++.++|+| ||++++.++...+....+ ....+.+++.++++++||+.+
T Consensus 263 ~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~ 342 (358)
T 1zg3_A 263 DWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSY 342 (358)
T ss_dssp GSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCCEE
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHHHcCCCee
Confidence 99887777999999999999 999999876543322110 112378999999999999999
Q ss_pred EEee
Q 024021 245 SIVD 248 (274)
Q Consensus 245 ~~~~ 248 (274)
++..
T Consensus 343 ~~~~ 346 (358)
T 1zg3_A 343 KITP 346 (358)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8876
No 146
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.58 E-value=4e-15 Score=120.93 Aligned_cols=127 Identities=15% Similarity=0.161 Sum_probs=94.7
Q ss_pred CCCCeEEEEcCCcchhHHHhhC---CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC---CC----CCCee
Q 024021 107 LPKGRALVPGCGTGYDVVAMAS---PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW---CP----TELFD 176 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~---~~----~~~~D 176 (274)
.++.+|||+|||+|..+..+++ ++.+|+++|+++.+++.|++++...+..++++++.+|+.+. .. .++||
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD 136 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLD 136 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCS
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceE
Confidence 3568999999999999999987 37799999999999999999998877777899999998652 11 16899
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCC-CcEEEE
Q 024021 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMG-FQAISI 246 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~ 246 (274)
+|++....++.. ....++..+ ++|+|||++++...... ...++.+.++... |....+
T Consensus 137 ~V~~d~~~~~~~--~~~~~~~~~-~~LkpgG~lv~~~~~~~----------~~~~~~~~l~~~~~~~~~~~ 194 (221)
T 3u81_A 137 MVFLDHWKDRYL--PDTLLLEKC-GLLRKGTVLLADNVIVP----------GTPDFLAYVRGSSSFECTHY 194 (221)
T ss_dssp EEEECSCGGGHH--HHHHHHHHT-TCCCTTCEEEESCCCCC----------CCHHHHHHHHHCTTEEEEEE
T ss_pred EEEEcCCcccch--HHHHHHHhc-cccCCCeEEEEeCCCCc----------chHHHHHHHhhCCCceEEEc
Confidence 999887666542 223556666 99999999988543221 2345556665554 544433
No 147
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.58 E-value=5.2e-15 Score=120.06 Aligned_cols=105 Identities=17% Similarity=0.161 Sum_probs=85.6
Q ss_pred CCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC----CCCCCeeEEEec
Q 024021 108 PKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW----CPTELFDLIFDY 181 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~----~~~~~~D~v~~~ 181 (274)
++.+|||||||+|..+..+++ ++..|+|+|+++.+++.|+++....+.. ++.++.+|+.+. .++++||.|+++
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~-nv~~~~~Da~~~l~~~~~~~~~d~v~~~ 112 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLS-NLRVMCHDAVEVLHKMIPDNSLRMVQLF 112 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCS-SEEEECSCHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHcCCCChheEEEe
Confidence 567999999999999999986 5678999999999999999998877653 699999998773 567899999987
Q ss_pred ccccccChhHH------HHHHHHHHhcccCCcEEEEEE
Q 024021 182 TFFCAIEPEMR------AAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 182 ~~~~~~~~~~~------~~~l~~~~~~L~pgG~~~~~~ 213 (274)
.+..+...... ..+++.+.++|+|||.+++.+
T Consensus 113 ~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 113 FPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp SCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence 54332211111 258999999999999999877
No 148
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.58 E-value=6.8e-15 Score=116.04 Aligned_cols=107 Identities=17% Similarity=0.089 Sum_probs=85.9
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCC-CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-----CCCeeEEEe
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPE-RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP-----TELFDLIFD 180 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~~D~v~~ 180 (274)
.++.+|||+|||+|..+..+++.+ .+|+++|+++.+++.|+++....+..++++++.+|+.+..+ .++||+|++
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~ 122 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLL 122 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred cCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEE
Confidence 356899999999999999887755 59999999999999999998877665689999999977322 578999999
Q ss_pred cccccccChhHHHHHHHHH--HhcccCCcEEEEEEccC
Q 024021 181 YTFFCAIEPEMRAAWAQKI--KDFLKPDGELITLMFPI 216 (274)
Q Consensus 181 ~~~~~~~~~~~~~~~l~~~--~~~L~pgG~~~~~~~~~ 216 (274)
+.++.... ....+..+ .++|+|||.+++.....
T Consensus 123 ~~~~~~~~---~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 123 DPPYAKQE---IVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp CCCGGGCC---HHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred CCCCCchh---HHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 88865322 23455666 88999999999876443
No 149
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.58 E-value=8e-15 Score=122.62 Aligned_cols=105 Identities=20% Similarity=0.221 Sum_probs=84.8
Q ss_pred CCCeEEEEcCCcch----hHHHhhC--C----CCeEEEEeCChHHHHHHHHHhhc-----------------------CC
Q 024021 108 PKGRALVPGCGTGY----DVVAMAS--P----ERYVVGLEISDIAIKKAEELSSS-----------------------LP 154 (274)
Q Consensus 108 ~~~~vLDiG~G~G~----~~~~l~~--~----~~~v~~vD~~~~~~~~a~~~~~~-----------------------~~ 154 (274)
++.+|+|+|||||. +++.+++ . +.+|+|+|+|+.+++.|++.... .+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 34699999999998 4444544 2 46999999999999999987521 00
Q ss_pred -------CCcceEEEEcccCCC-CC-CCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEE
Q 024021 155 -------NAKFVSFLKADFFTW-CP-TELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITL 212 (274)
Q Consensus 155 -------~~~~~~~~~~d~~~~-~~-~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~ 212 (274)
+..++.|...|+.+. .+ .++||+|+|.+++.|++++....++.+++++|+|||++++.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 013699999999883 33 47899999999999999888899999999999999999883
No 150
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.58 E-value=1.9e-15 Score=117.49 Aligned_cols=103 Identities=18% Similarity=0.092 Sum_probs=83.4
Q ss_pred CCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-----CCCeeEEEecc
Q 024021 108 PKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP-----TELFDLIFDYT 182 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~~D~v~~~~ 182 (274)
++.+|||+|||+|..+..+++.+..++++|+++.+++.|+++....+. +++++.+|+.+..+ .++||+|+++.
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~ 118 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGL--GARVVALPVEVFLPEAKAQGERFTVAFMAP 118 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTC--CCEEECSCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHcCC--ceEEEeccHHHHHHhhhccCCceEEEEECC
Confidence 568999999999999999998888899999999999999999877654 69999999876321 24799999998
Q ss_pred cccccChhHHHHHHHHHH--hcccCCcEEEEEEccC
Q 024021 183 FFCAIEPEMRAAWAQKIK--DFLKPDGELITLMFPI 216 (274)
Q Consensus 183 ~~~~~~~~~~~~~l~~~~--~~L~pgG~~~~~~~~~ 216 (274)
+++... ..+++.+. ++|+|||.+++.....
T Consensus 119 ~~~~~~----~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 119 PYAMDL----AALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp CTTSCT----THHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred CCchhH----HHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 775211 23455555 9999999999877544
No 151
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.58 E-value=1.6e-14 Score=119.83 Aligned_cols=133 Identities=17% Similarity=0.218 Sum_probs=101.6
Q ss_pred CeEEEEcCCc--chhHHHhhC---CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC-----C--CCCee-
Q 024021 110 GRALVPGCGT--GYDVVAMAS---PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC-----P--TELFD- 176 (274)
Q Consensus 110 ~~vLDiG~G~--G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~--~~~~D- 176 (274)
.+|||+|||+ +.++..++. ++.+|+++|.|+.|++.|+.++.... ..+++|+.+|+.++. + .+.||
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~-~~~~~~v~aD~~~~~~~l~~~~~~~~~D~ 158 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP-EGRTAYVEADMLDPASILDAPELRDTLDL 158 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS-SSEEEEEECCTTCHHHHHTCHHHHTTCCT
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC-CCcEEEEEecccChhhhhcccccccccCc
Confidence 6899999997 444444432 78899999999999999999986542 247999999998731 1 23455
Q ss_pred ----EEEecccccccChhH-HHHHHHHHHhcccCCcEEEEEEccCCCC------------CCCCCc-ccCHHHHHHHHhc
Q 024021 177 ----LIFDYTFFCAIEPEM-RAAWAQKIKDFLKPDGELITLMFPISDH------------VGGPPY-KVSVSDYEEVLQP 238 (274)
Q Consensus 177 ----~v~~~~~~~~~~~~~-~~~~l~~~~~~L~pgG~~~~~~~~~~~~------------~~~~~~-~~~~~~~~~~l~~ 238 (274)
.|+++.+++++++.. ...++.++.+.|+|||++++........ ..+.++ ..+.+++..+|.
T Consensus 159 ~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~p~~~~~~~~~~~~~g~p~~~rs~~ei~~~f~- 237 (277)
T 3giw_A 159 TRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAPQEVGRVAREYAARNMPMRLRTHAEAEEFFE- 237 (277)
T ss_dssp TSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTSHHHHHHHHHHHHHTTCCCCCCCHHHHHHTTT-
T ss_pred CCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCCHHHHHHHHHHHHhcCCCCccCCHHHHHHHhC-
Confidence 688999999998754 4789999999999999999988765421 122233 458899999995
Q ss_pred CCCcEEE
Q 024021 239 MGFQAIS 245 (274)
Q Consensus 239 ~Gf~~~~ 245 (274)
||++++
T Consensus 238 -Glelve 243 (277)
T 3giw_A 238 -GLELVE 243 (277)
T ss_dssp -TSEECT
T ss_pred -CCcccC
Confidence 999754
No 152
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.57 E-value=8.5e-15 Score=118.62 Aligned_cols=141 Identities=12% Similarity=0.061 Sum_probs=96.0
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHH----hhcCCCCcceEEEEcccCCCC-CCCCeeEE
Q 024021 106 ALPKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEEL----SSSLPNAKFVSFLKADFFTWC-PTELFDLI 178 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~----~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v 178 (274)
..++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.+.+. ....+. ++++++.+|+.+.. +.+. |.|
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~-~~v~~~~~d~~~l~~~~~~-d~v 102 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGL-PNLLYLWATAERLPPLSGV-GEL 102 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCC-TTEEEEECCSTTCCSCCCE-EEE
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCC-CceEEEecchhhCCCCCCC-CEE
Confidence 345679999999999999999884 78999999999988864332 223332 47999999998843 3344 777
Q ss_pred Eeccccc-----ccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC-----CCCCCcc---cCHHHHHHHHhcCCCcEEE
Q 024021 179 FDYTFFC-----AIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH-----VGGPPYK---VSVSDYEEVLQPMGFQAIS 245 (274)
Q Consensus 179 ~~~~~~~-----~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~-----~~~~~~~---~~~~~~~~~l~~~Gf~~~~ 245 (274)
+....+. ++++ ...+++++.++|+|||.+++........ ..+.+.. ...+++.++++++||++..
T Consensus 103 ~~~~~~~~~~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~ 180 (218)
T 3mq2_A 103 HVLMPWGSLLRGVLGS--SPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLAD 180 (218)
T ss_dssp EEESCCHHHHHHHHTS--SSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEE
T ss_pred EEEccchhhhhhhhcc--HHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCcee
Confidence 6333222 2221 1578999999999999999854322110 0111111 1234588899999999999
Q ss_pred Eeecc
Q 024021 246 IVDNK 250 (274)
Q Consensus 246 ~~~~~ 250 (274)
+....
T Consensus 181 ~~~~~ 185 (218)
T 3mq2_A 181 CRYLE 185 (218)
T ss_dssp EEEEC
T ss_pred eeccc
Confidence 87754
No 153
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.57 E-value=9.4e-15 Score=126.86 Aligned_cols=104 Identities=21% Similarity=0.231 Sum_probs=88.4
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-CCCCCeeEEEecccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-CPTELFDLIFDYTFF 184 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~~ 184 (274)
.++.+|||+|||+|.++..+++.+. +|+|+|+++ +++.|+++....+..++++++.+|+.+. .+.++||+|++..+.
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~ 143 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMG 143 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCB
T ss_pred CCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcccc
Confidence 3568999999999999999998766 999999995 9999999998888877899999999984 455899999998765
Q ss_pred ccc-ChhHHHHHHHHHHhcccCCcEEEE
Q 024021 185 CAI-EPEMRAAWAQKIKDFLKPDGELIT 211 (274)
Q Consensus 185 ~~~-~~~~~~~~l~~~~~~L~pgG~~~~ 211 (274)
+++ .......++..+.++|+|||+++.
T Consensus 144 ~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 144 YCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp BTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred ccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 544 234567889999999999999874
No 154
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.57 E-value=1.5e-14 Score=125.62 Aligned_cols=105 Identities=20% Similarity=0.193 Sum_probs=89.9
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFC 185 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~ 185 (274)
.++.+|||+|||+|.++..+++.+. +|+++|+++ +++.|+++...+++.++++++.+|+.+...+++||+|++..+++
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~~D~Ivs~~~~~ 127 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDIIISEPMGY 127 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEEECCCBT
T ss_pred CCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCCCceeEEEEeCchh
Confidence 4668999999999999999988765 999999996 88999999888877778999999998855457899999998888
Q ss_pred ccChhHHHHHHHHHHhcccCCcEEEEE
Q 024021 186 AIEPEMRAAWAQKIKDFLKPDGELITL 212 (274)
Q Consensus 186 ~~~~~~~~~~l~~~~~~L~pgG~~~~~ 212 (274)
++..+.....+..+.++|+|||.+++.
T Consensus 128 ~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 128 MLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp TBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred cCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 776555567778899999999999853
No 155
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.57 E-value=6.8e-15 Score=121.83 Aligned_cols=108 Identities=14% Similarity=0.110 Sum_probs=86.7
Q ss_pred CCCeEEEEcCCcchhHHHhhCC----CCeEEEEeCChHHHHHHHHHhhcC---CCCcc----------------------
Q 024021 108 PKGRALVPGCGTGYDVVAMASP----ERYVVGLEISDIAIKKAEELSSSL---PNAKF---------------------- 158 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~----~~~v~~vD~~~~~~~~a~~~~~~~---~~~~~---------------------- 158 (274)
++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.|+++.... +..++
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 4579999999999999988764 569999999999999999887655 33222
Q ss_pred ---eE-------------EEEcccCCCC------CCCCeeEEEecccccccCh-------hHHHHHHHHHHhcccCCcEE
Q 024021 159 ---VS-------------FLKADFFTWC------PTELFDLIFDYTFFCAIEP-------EMRAAWAQKIKDFLKPDGEL 209 (274)
Q Consensus 159 ---~~-------------~~~~d~~~~~------~~~~~D~v~~~~~~~~~~~-------~~~~~~l~~~~~~L~pgG~~ 209 (274)
++ |..+|+.+.. ...+||+|+++.++.+... +....+++++.++|+|||++
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 210 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVI 210 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEE
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEE
Confidence 66 9999998854 3458999999987766532 45678999999999999999
Q ss_pred EEEEcc
Q 024021 210 ITLMFP 215 (274)
Q Consensus 210 ~~~~~~ 215 (274)
++....
T Consensus 211 ~~~~~~ 216 (250)
T 1o9g_A 211 AVTDRS 216 (250)
T ss_dssp EEEESS
T ss_pred EEeCcc
Confidence 985533
No 156
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.57 E-value=9.5e-15 Score=114.41 Aligned_cols=107 Identities=19% Similarity=0.114 Sum_probs=87.4
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCC-CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC--CCCCCeeEEEeccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPE-RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW--CPTELFDLIFDYTF 183 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~D~v~~~~~ 183 (274)
.++.+|||+|||+|..+..+++.+ .+|+++|+++.+++.|+++....+..++++++.+|+.+. ...++||+|+++.+
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~ 109 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPP 109 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCS
T ss_pred cCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCC
Confidence 456799999999999999888765 599999999999999999998887766899999999772 23457999999877
Q ss_pred ccccChhHHHHHHHHHH--hcccCCcEEEEEEccC
Q 024021 184 FCAIEPEMRAAWAQKIK--DFLKPDGELITLMFPI 216 (274)
Q Consensus 184 ~~~~~~~~~~~~l~~~~--~~L~pgG~~~~~~~~~ 216 (274)
++. ......++.+. ++|+|||.+++.....
T Consensus 110 ~~~---~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 110 YAK---ETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp SHH---HHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred CCc---chHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 642 33456667776 9999999999877544
No 157
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.56 E-value=1.1e-14 Score=126.75 Aligned_cols=104 Identities=22% Similarity=0.136 Sum_probs=88.9
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFC 185 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~ 185 (274)
.++++|||||||+|.+++.+++.|+ +|+++|.++ +++.|++.+..+++.++++++.+|+.+...+++||+|++-..-.
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~DvivsE~~~~ 160 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWMGY 160 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCBT
T ss_pred cCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEEeecccc
Confidence 4578999999999999999998887 899999986 88999999999999899999999999866668999999865544
Q ss_pred cc-ChhHHHHHHHHHHhcccCCcEEEE
Q 024021 186 AI-EPEMRAAWAQKIKDFLKPDGELIT 211 (274)
Q Consensus 186 ~~-~~~~~~~~l~~~~~~L~pgG~~~~ 211 (274)
.+ .......++....++|+|||.++-
T Consensus 161 ~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 161 GLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp TBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred cccccchhhhHHHHHHhhCCCCceECC
Confidence 43 234677888999999999999773
No 158
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.56 E-value=9.4e-15 Score=121.26 Aligned_cols=124 Identities=19% Similarity=0.155 Sum_probs=100.4
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC---CCeEEEEeCChHHHHHHHHHhhcC-CCCcceEEEEcccCCC-CCCCCeeEEEec
Q 024021 107 LPKGRALVPGCGTGYDVVAMASP---ERYVVGLEISDIAIKKAEELSSSL-PNAKFVSFLKADFFTW-CPTELFDLIFDY 181 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~-~~~~~~~~~~~d~~~~-~~~~~~D~v~~~ 181 (274)
.++.+|||+|||+|.++..+++. +.+++++|+++.+++.|+++.... + .+++++..+|+.+. .+.++||+|++.
T Consensus 95 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g-~~~v~~~~~d~~~~~~~~~~~D~v~~~ 173 (258)
T 2pwy_A 95 APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ-VENVRFHLGKLEEAELEEAAYDGVALD 173 (258)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-CCCEEEEESCGGGCCCCTTCEEEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC-CCCEEEEECchhhcCCCCCCcCEEEEC
Confidence 45679999999999999988874 679999999999999999998665 4 46799999999885 556789999973
Q ss_pred ccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEee
Q 024021 182 TFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 182 ~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 248 (274)
.+ ....+++.+.++|+|||.+++..... ....++.+.++++||..+.+.+
T Consensus 174 -----~~--~~~~~l~~~~~~L~~gG~l~~~~~~~----------~~~~~~~~~l~~~gf~~~~~~~ 223 (258)
T 2pwy_A 174 -----LM--EPWKVLEKAALALKPDRFLVAYLPNI----------TQVLELVRAAEAHPFRLERVLE 223 (258)
T ss_dssp -----SS--CGGGGHHHHHHHEEEEEEEEEEESCH----------HHHHHHHHHHTTTTEEEEEEEE
T ss_pred -----Cc--CHHHHHHHHHHhCCCCCEEEEEeCCH----------HHHHHHHHHHHHCCCceEEEEE
Confidence 22 12367899999999999999987322 1356788889999999877654
No 159
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.56 E-value=6.7e-14 Score=112.33 Aligned_cols=129 Identities=13% Similarity=0.074 Sum_probs=100.6
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFC 185 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~ 185 (274)
.++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++....+. +++++.+|+.+.. ++||+|+++.+++
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~--~~~D~v~~~~p~~ 123 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKG--KFKVFIGDVSEFN--SRVDIVIMNPPFG 123 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT--SEEEEESCGGGCC--CCCSEEEECCCCS
T ss_pred CCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC--CEEEEECchHHcC--CCCCEEEEcCCCc
Confidence 4568999999999999999988765 799999999999999999887654 6999999998753 4899999999887
Q ss_pred ccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeeccc
Q 024021 186 AIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDNKL 251 (274)
Q Consensus 186 ~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 251 (274)
.........+++.+.+++ |+ +++..... ..+.+.+.+.+++.||.+..+.....
T Consensus 124 ~~~~~~~~~~l~~~~~~l--~~-~~~~~~~~---------~~~~~~~~~~l~~~g~~~~~~~~~~~ 177 (207)
T 1wy7_A 124 SQRKHADRPFLLKAFEIS--DV-VYSIHLAK---------PEVRRFIEKFSWEHGFVVTHRLTTKI 177 (207)
T ss_dssp SSSTTTTHHHHHHHHHHC--SE-EEEEEECC---------HHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred cccCCchHHHHHHHHHhc--Cc-EEEEEeCC---------cCCHHHHHHHHHHCCCeEEEEEEEec
Confidence 765444457788888888 44 44433111 11467788899999998877765443
No 160
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.56 E-value=8.5e-15 Score=123.12 Aligned_cols=125 Identities=19% Similarity=0.124 Sum_probs=101.8
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC---CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASP---ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTF 183 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~ 183 (274)
.++.+|||+|||+|.++..+++. +.+++++|+++.+++.|+++....+..+++++..+|+.+..+.++||+|++..
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~V~~~~- 189 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEKDVDALFLDV- 189 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSCCSEEEEEECC-
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccCCccCEEEECC-
Confidence 45679999999999999988873 67999999999999999999887766568999999998876667899999742
Q ss_pred ccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEee
Q 024021 184 FCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 184 ~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 248 (274)
+ ....+++.+.++|+|||.+++..... ....++.+.+++.||..+++..
T Consensus 190 ----~--~~~~~l~~~~~~L~pgG~l~~~~~~~----------~~~~~~~~~l~~~gf~~~~~~~ 238 (277)
T 1o54_A 190 ----P--DPWNYIDKCWEALKGGGRFATVCPTT----------NQVQETLKKLQELPFIRIEVWE 238 (277)
T ss_dssp ----S--CGGGTHHHHHHHEEEEEEEEEEESSH----------HHHHHHHHHHHHSSEEEEEEEC
T ss_pred ----c--CHHHHHHHHHHHcCCCCEEEEEeCCH----------HHHHHHHHHHHHCCCceeEEEE
Confidence 1 12367899999999999999987322 1356788888899999877654
No 161
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.56 E-value=2.4e-14 Score=116.93 Aligned_cols=106 Identities=19% Similarity=0.130 Sum_probs=88.0
Q ss_pred HHHhcC-CCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCCCCeeE
Q 024021 100 HLHQSG-ALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPTELFDL 177 (274)
Q Consensus 100 ~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~ 177 (274)
.++... ..++.+|||+|||+|..+..+++.+.+|+++|+++.+++.++++....+ +++++.+|+.+ ....++||+
T Consensus 61 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~v~~~~~d~~~~~~~~~~fD~ 137 (231)
T 1vbf_A 61 FMLDELDLHKGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLSYYN---NIKLILGDGTLGYEEEKPYDR 137 (231)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHTTCS---SEEEEESCGGGCCGGGCCEEE
T ss_pred HHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHHhhcC---CeEEEECCcccccccCCCccE
Confidence 344433 3456799999999999999998877899999999999999999987664 69999999987 333578999
Q ss_pred EEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccC
Q 024021 178 IFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPI 216 (274)
Q Consensus 178 v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 216 (274)
|++..++++++ +.+.++|+|||++++.....
T Consensus 138 v~~~~~~~~~~--------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 138 VVVWATAPTLL--------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp EEESSBBSSCC--------HHHHHTEEEEEEEEEEECSS
T ss_pred EEECCcHHHHH--------HHHHHHcCCCcEEEEEEcCC
Confidence 99999999885 35888999999999987543
No 162
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.56 E-value=3.1e-16 Score=129.14 Aligned_cols=137 Identities=18% Similarity=0.190 Sum_probs=105.6
Q ss_pred CCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccccccc
Q 024021 108 PKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFCAI 187 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~~ 187 (274)
++.+|||+|||+|..+..+++.+.+|+|+|+++.+++.|++++...+..++++++.+|+.+..+.++||+|+++.++++.
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~~ 157 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLSPPWGGP 157 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCCSEEEECCCCSSG
T ss_pred CCCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCCCEEEECCCcCCc
Confidence 67899999999999999999988999999999999999999998887666899999999886667799999999998876
Q ss_pred ChhHHHHHHHHHHhcccCCcEEEEEEccCCCC--CCCCCcccCHHHHHHHHhcCCCcEEEE
Q 024021 188 EPEMRAAWAQKIKDFLKPDGELITLMFPISDH--VGGPPYKVSVSDYEEVLQPMGFQAISI 246 (274)
Q Consensus 188 ~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 246 (274)
+.. ...+..+.++|+|||.+++........ ..-.+.....+++..++...|...+..
T Consensus 158 ~~~--~~~~~~~~~~L~pgG~~i~~~~~~~~~~~~~~lp~~~~~~~~~~~l~~~g~~~i~~ 216 (241)
T 3gdh_A 158 DYA--TAETFDIRTMMSPDGFEIFRLSKKITNNIVYFLPRNADIDQVASLAGPGGQVEIEQ 216 (241)
T ss_dssp GGG--GSSSBCTTTSCSSCHHHHHHHHHHHCSCEEEEEETTBCHHHHHHTTCTTCCEEEEE
T ss_pred chh--hhHHHHHHhhcCCcceeHHHHHHhhCCceEEECCCCCCHHHHHHHhccCCCEEEEe
Confidence 432 235667899999999966543211100 000112236788888888877655443
No 163
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.56 E-value=2.7e-14 Score=119.32 Aligned_cols=132 Identities=12% Similarity=0.024 Sum_probs=106.2
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCCC-CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccc
Q 024021 106 ALPKGRALVPGCGTGYDVVAMASPE-RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFF 184 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~ 184 (274)
..++.+|||+|||+|.++..+++.| .+|+++|++|.+++.+++++..+++.++++++.+|..+..+.+.||.|+++.+.
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~D~Vi~~~p~ 202 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYVV 202 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCCS
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccCCCEEEECCCC
Confidence 4567899999999999999988865 599999999999999999999999989999999999998777899999976553
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEe
Q 024021 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIV 247 (274)
Q Consensus 185 ~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 247 (274)
.. ..++..+.++|++||++.+.++....... ....+.+.+.++..|+.+..+.
T Consensus 203 ~~------~~~l~~a~~~lk~gG~ih~~~~~~e~~~~----~~~~e~i~~~~~~~g~~v~~~~ 255 (278)
T 3k6r_A 203 RT------HEFIPKALSIAKDGAIIHYHNTVPEKLMP----REPFETFKRITKEYGYDVEKLN 255 (278)
T ss_dssp SG------GGGHHHHHHHEEEEEEEEEEEEEEGGGTT----TTTHHHHHHHHHHTTCEEEEEE
T ss_pred cH------HHHHHHHHHHcCCCCEEEEEeeecccccc----hhHHHHHHHHHHHcCCcEEEEE
Confidence 32 24567788999999998776654432211 1245778888999999875543
No 164
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.56 E-value=1.2e-14 Score=127.38 Aligned_cols=106 Identities=17% Similarity=0.126 Sum_probs=90.9
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFC 185 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~ 185 (274)
.++.+|||+|||+|.++..+++.|. +|+|+|++ .+++.|++++..+++.++++++.+|+.+...+++||+|++..+.+
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~Iv~~~~~~ 140 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLPEKVDVIISEWMGY 140 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCSSCEEEEEECCCBT
T ss_pred CCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcCCcceEEEEcChhh
Confidence 4568999999999999999998877 99999999 999999999988888788999999998855458899999977655
Q ss_pred ccCh-hHHHHHHHHHHhcccCCcEEEEEE
Q 024021 186 AIEP-EMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 186 ~~~~-~~~~~~l~~~~~~L~pgG~~~~~~ 213 (274)
.+.. .....++..+.++|+|||++++..
T Consensus 141 ~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 141 FLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp TBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred cccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 5532 456778999999999999997643
No 165
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.55 E-value=2.7e-14 Score=123.53 Aligned_cols=103 Identities=18% Similarity=0.210 Sum_probs=86.8
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-CCCCCeeEEEecccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-CPTELFDLIFDYTFF 184 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~~ 184 (274)
.++.+|||+|||+|.++..+++.|. +|+|+|+++ +++.|++++..+++.++++++.+|+.+. .+.++||+|++..+.
T Consensus 63 ~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~ 141 (340)
T 2fyt_A 63 FKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMG 141 (340)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCCB
T ss_pred cCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCch
Confidence 4568999999999999999988765 999999997 9999999998887777899999999884 445789999998743
Q ss_pred ccc-ChhHHHHHHHHHHhcccCCcEEE
Q 024021 185 CAI-EPEMRAAWAQKIKDFLKPDGELI 210 (274)
Q Consensus 185 ~~~-~~~~~~~~l~~~~~~L~pgG~~~ 210 (274)
..+ .......++..+.++|+|||.++
T Consensus 142 ~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 142 YFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp TTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 333 23456788999999999999987
No 166
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.55 E-value=1.5e-14 Score=117.57 Aligned_cols=103 Identities=19% Similarity=0.072 Sum_probs=86.0
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC---CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC------CCCeeE
Q 024021 107 LPKGRALVPGCGTGYDVVAMASP---ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP------TELFDL 177 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~------~~~~D~ 177 (274)
.++.+|||+|||+|..+..+++. +.+|+++|+++.+++.|++++...+..++++++.+|+.+..+ .++||+
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~ 136 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDF 136 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSE
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCE
Confidence 35689999999999999999884 789999999999999999999888777789999999976322 157999
Q ss_pred EEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 178 IFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 178 v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
|++.... .....+++.+.++|+|||++++...
T Consensus 137 v~~d~~~-----~~~~~~l~~~~~~L~pgG~lv~~~~ 168 (223)
T 3duw_A 137 IFIDADK-----QNNPAYFEWALKLSRPGTVIIGDNV 168 (223)
T ss_dssp EEECSCG-----GGHHHHHHHHHHTCCTTCEEEEESC
T ss_pred EEEcCCc-----HHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 9976653 2345788999999999998887543
No 167
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.55 E-value=1.6e-14 Score=115.77 Aligned_cols=105 Identities=10% Similarity=-0.009 Sum_probs=84.9
Q ss_pred CCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC--CCCCCCeeEEEecccc
Q 024021 108 PKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT--WCPTELFDLIFDYTFF 184 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~D~v~~~~~~ 184 (274)
++.+|||+|||+|..+..++..+. +|+++|+++.+++.|+++....+. ++++++.+|+.+ ....++||+|++...+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~ 132 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKA-GNARVVNSNAMSFLAQKGTPHNIVFVDPPF 132 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCHHHHHSSCCCCEEEEEECCSS
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEECCHHHHHhhcCCCCCEEEECCCC
Confidence 468999999999999998776664 999999999999999999987765 579999999877 2345689999998775
Q ss_pred cccChhHHHHHHHHHHh--cccCCcEEEEEEccC
Q 024021 185 CAIEPEMRAAWAQKIKD--FLKPDGELITLMFPI 216 (274)
Q Consensus 185 ~~~~~~~~~~~l~~~~~--~L~pgG~~~~~~~~~ 216 (274)
+ . .....+++.+.+ +|+|||++++.....
T Consensus 133 ~-~--~~~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 133 R-R--GLLEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp S-T--TTHHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred C-C--CcHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 4 2 233466777765 599999999877544
No 168
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.54 E-value=3.8e-14 Score=117.29 Aligned_cols=103 Identities=18% Similarity=0.117 Sum_probs=86.2
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC---CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC--C--CCCCeeEEE
Q 024021 107 LPKGRALVPGCGTGYDVVAMASP---ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW--C--PTELFDLIF 179 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--~--~~~~~D~v~ 179 (274)
.++.+|||+|||+|..+..+++. +.+|+++|+++.+++.|++++...+..++++++.+|+.+. . ..++||+|+
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~ 141 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIF 141 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEE
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEE
Confidence 35689999999999999999884 7899999999999999999998888777899999998762 1 234899999
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 180 DYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 180 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
+.... .....+++.+.++|+|||++++...
T Consensus 142 ~d~~~-----~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 142 IDADK-----PNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp ECSCG-----GGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred ECCch-----HHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 86532 3445789999999999999988654
No 169
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.54 E-value=1.5e-14 Score=117.63 Aligned_cols=99 Identities=13% Similarity=0.085 Sum_probs=83.9
Q ss_pred CeEEEEcCCcchhHHHhhC---CCCeEEEEeCChHHHHHHHHHhhcCCCC-cceEEEEcccCCC---CCCCCeeEEEecc
Q 024021 110 GRALVPGCGTGYDVVAMAS---PERYVVGLEISDIAIKKAEELSSSLPNA-KFVSFLKADFFTW---CPTELFDLIFDYT 182 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~~~~~~~d~~~~---~~~~~~D~v~~~~ 182 (274)
.+|||+|||+|..+..+++ ++.+|+++|+++.+++.|++++...+.. ++++++.+|+.+. .+.++||+|++..
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d~ 137 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQV 137 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEECC
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEcC
Confidence 4999999999999999886 3789999999999999999999988887 7899999998763 2257899999765
Q ss_pred cccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024021 183 FFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 183 ~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 213 (274)
.. .....+++.+.++|+|||++++.+
T Consensus 138 ~~-----~~~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 138 SP-----MDLKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp CT-----TTHHHHHHHHHHHEEEEEEEEETT
T ss_pred cH-----HHHHHHHHHHHHHcCCCcEEEEeC
Confidence 43 234568999999999999999844
No 170
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.53 E-value=1.7e-14 Score=117.31 Aligned_cols=104 Identities=13% Similarity=0.096 Sum_probs=86.5
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC---CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCC-------CCee
Q 024021 107 LPKGRALVPGCGTGYDVVAMASP---ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPT-------ELFD 176 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~~D 176 (274)
.++.+|||+|||+|..+..+++. +.+|+++|+++.+++.|++++...+..++++++.+|+.+..+. ++||
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYD 142 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEE
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCcc
Confidence 35679999999999999999884 7899999999999999999998888777899999998663211 6899
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEcc
Q 024021 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFP 215 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 215 (274)
+|++.... .....+++.+.++|+|||++++....
T Consensus 143 ~v~~~~~~-----~~~~~~l~~~~~~L~pgG~lv~~~~~ 176 (225)
T 3tr6_A 143 LIYIDADK-----ANTDLYYEESLKLLREGGLIAVDNVL 176 (225)
T ss_dssp EEEECSCG-----GGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred EEEECCCH-----HHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 99965542 33467889999999999999986543
No 171
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.53 E-value=4.6e-14 Score=113.96 Aligned_cols=100 Identities=23% Similarity=0.162 Sum_probs=83.9
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCC---CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-CCCeeEEEecc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPE---RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP-TELFDLIFDYT 182 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~ 182 (274)
.++.+|||+|||+|..+..+++.+ .+|+++|+++.+++.++++....+. .++++..+|+....+ .++||+|++..
T Consensus 76 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~fD~v~~~~ 154 (215)
T 2yxe_A 76 KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGY-DNVIVIVGDGTLGYEPLAPYDRIYTTA 154 (215)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTC-TTEEEEESCGGGCCGGGCCEEEEEESS
T ss_pred CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC-CCeEEEECCcccCCCCCCCeeEEEECC
Confidence 456799999999999999988743 7999999999999999998876544 359999999866433 56899999999
Q ss_pred cccccChhHHHHHHHHHHhcccCCcEEEEEEcc
Q 024021 183 FFCAIEPEMRAAWAQKIKDFLKPDGELITLMFP 215 (274)
Q Consensus 183 ~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 215 (274)
++++++ +.+.++|+|||.+++....
T Consensus 155 ~~~~~~--------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 155 AGPKIP--------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp BBSSCC--------HHHHHTEEEEEEEEEEESS
T ss_pred chHHHH--------HHHHHHcCCCcEEEEEECC
Confidence 999886 3788999999999998743
No 172
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.53 E-value=3.4e-14 Score=128.04 Aligned_cols=104 Identities=21% Similarity=0.216 Sum_probs=89.0
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCC-CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPE-RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFC 185 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~ 185 (274)
.++.+|||+|||+|.++..+++.+ .+|+++|+++ +++.|++++..+++.++++++.+|+.+...+++||+|++..+++
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~~~fD~Ivs~~~~~ 235 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDIIISEPMGY 235 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCHH
T ss_pred cCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccCCCeEEEEEeCchH
Confidence 356899999999999999988865 4999999998 99999999988887788999999998854456899999988877
Q ss_pred ccChhHHHHHHHHHHhcccCCcEEEE
Q 024021 186 AIEPEMRAAWAQKIKDFLKPDGELIT 211 (274)
Q Consensus 186 ~~~~~~~~~~l~~~~~~L~pgG~~~~ 211 (274)
++..+.....+..+.++|+|||.+++
T Consensus 236 ~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 236 MLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp HHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred hcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 77655556677789999999999885
No 173
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.53 E-value=5e-13 Score=110.76 Aligned_cols=143 Identities=15% Similarity=0.125 Sum_probs=93.8
Q ss_pred CCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC----CCC---CCCeeEE
Q 024021 108 PKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT----WCP---TELFDLI 178 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~----~~~---~~~~D~v 178 (274)
++.+|||+|||+|..+..++. ++.+|+|+|+++.+++.|+++....+..++++++.+|+.+ ..+ .++||+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 457999999999999988876 4689999999999999999999888776779999999654 233 2579999
Q ss_pred EecccccccCh-------------hHHHHHHHHHHhcccCCcEEEEEEccCC-----CCCCC-----CCcccCHHHHHHH
Q 024021 179 FDYTFFCAIEP-------------EMRAAWAQKIKDFLKPDGELITLMFPIS-----DHVGG-----PPYKVSVSDYEEV 235 (274)
Q Consensus 179 ~~~~~~~~~~~-------------~~~~~~l~~~~~~L~pgG~~~~~~~~~~-----~~~~~-----~~~~~~~~~~~~~ 235 (274)
+++.++..... .....++..+.++|+|||.+.+...-.. ....+ .......+++.++
T Consensus 145 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~ 224 (254)
T 2h00_A 145 MCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLGKKCSLAPLKEE 224 (254)
T ss_dssp EECCCCC-------------------------CTTTTHHHHTHHHHHHHHHHHHHHHGGGBSCEEEEESSTTSHHHHHHH
T ss_pred EECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHHHHHhcccceEEEEECCCChhHHHHHHHH
Confidence 99977664430 0112344555666666665443211000 00000 0011134789999
Q ss_pred HhcCCCcEEEEeecc
Q 024021 236 LQPMGFQAISIVDNK 250 (274)
Q Consensus 236 l~~~Gf~~~~~~~~~ 250 (274)
++++||..+.+....
T Consensus 225 l~~~Gf~~v~~~~~~ 239 (254)
T 2h00_A 225 LRIQGVPKVTYTEFC 239 (254)
T ss_dssp HHHTTCSEEEEEEEE
T ss_pred HHHcCCCceEEEEEe
Confidence 999999988776543
No 174
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.52 E-value=6.2e-14 Score=115.00 Aligned_cols=127 Identities=13% Similarity=0.107 Sum_probs=90.7
Q ss_pred CCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhc-----CCCCcceEEEEcccCC-C---CCCCCee
Q 024021 108 PKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSS-----LPNAKFVSFLKADFFT-W---CPTELFD 176 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~-----~~~~~~~~~~~~d~~~-~---~~~~~~D 176 (274)
++.+|||||||+|.++..+++ ++..++|+|+++.+++.|++++.. .....++.++.+|+.+ . .+.++||
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D 125 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLT 125 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEE
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCee
Confidence 346899999999999999987 467999999999999999887642 1122579999999986 2 4568899
Q ss_pred EEEecccccccCh--hH----HHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCC-CcEE
Q 024021 177 LIFDYTFFCAIEP--EM----RAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMG-FQAI 244 (274)
Q Consensus 177 ~v~~~~~~~~~~~--~~----~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~ 244 (274)
.|++...-.+... .. ...+++.+.++|+|||.+++..... .-.+.+.+.+..+| |..+
T Consensus 126 ~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~----------~~~~~~~~~l~~~~~f~~~ 190 (235)
T 3ckk_A 126 KMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVL----------ELHDWMCTHFEEHPLFERV 190 (235)
T ss_dssp EEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESCH----------HHHHHHHHHHHTSTTEEEE
T ss_pred EEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCH----------HHHHHHHHHHHHCCCcccc
Confidence 9987543221100 00 1368999999999999999876211 12355666777776 5443
No 175
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.52 E-value=5e-14 Score=121.25 Aligned_cols=103 Identities=20% Similarity=0.216 Sum_probs=86.6
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-CCCCCeeEEEecccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-CPTELFDLIFDYTFF 184 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~~ 184 (274)
.++.+|||+|||+|.++..+++.+. +|+|+|++ .+++.|++++..++..++++++.+|+.+. .+.++||+|++..+.
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~ 115 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMG 115 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCB
T ss_pred cCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCch
Confidence 3467999999999999999988766 99999999 58999999998888778899999999884 444789999998765
Q ss_pred ccc-ChhHHHHHHHHHHhcccCCcEEE
Q 024021 185 CAI-EPEMRAAWAQKIKDFLKPDGELI 210 (274)
Q Consensus 185 ~~~-~~~~~~~~l~~~~~~L~pgG~~~ 210 (274)
+.+ .......++..+.++|+|||.++
T Consensus 116 ~~l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 116 YFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp TTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred hhcccHHHHHHHHHHHHhhcCCCeEEE
Confidence 544 23445678899999999999987
No 176
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.52 E-value=2.2e-13 Score=108.79 Aligned_cols=121 Identities=14% Similarity=0.061 Sum_probs=90.7
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFC 185 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~ 185 (274)
.++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.|+++.. +++++.+|+.+.. ++||+|+++.+++
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~------~~~~~~~d~~~~~--~~~D~v~~~~p~~ 121 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG------GVNFMVADVSEIS--GKYDTWIMNPPFG 121 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT------TSEEEECCGGGCC--CCEEEEEECCCC-
T ss_pred CCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC------CCEEEECcHHHCC--CCeeEEEECCCch
Confidence 4568999999999999999988765 79999999999999999874 5899999998753 6899999999999
Q ss_pred ccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeecc
Q 024021 186 AIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDNK 250 (274)
Q Consensus 186 ~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 250 (274)
++.......+++.+.+.+ |.+++..... +...+.+.++..| .+..+....
T Consensus 122 ~~~~~~~~~~l~~~~~~~---g~~~~~~~~~-----------~~~~~~~~~~~~g-~~~~~~~~~ 171 (200)
T 1ne2_A 122 SVVKHSDRAFIDKAFETS---MWIYSIGNAK-----------ARDFLRREFSARG-DVFREEKVY 171 (200)
T ss_dssp ------CHHHHHHHHHHE---EEEEEEEEGG-----------GHHHHHHHHHHHE-EEEEEEEEE
T ss_pred hccCchhHHHHHHHHHhc---CcEEEEEcCc-----------hHHHHHHHHHHCC-CEEEEEEEe
Confidence 886544457888888888 4455444211 4677888899988 665555433
No 177
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.52 E-value=1.7e-13 Score=119.97 Aligned_cols=128 Identities=17% Similarity=0.220 Sum_probs=101.6
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCCCC--eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-CCCCCeeEEEecc
Q 024021 106 ALPKGRALVPGCGTGYDVVAMASPER--YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-CPTELFDLIFDYT 182 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~ 182 (274)
..++.+|||+|||+|.++..++..+. +|+|+|+++.+++.|++++...++.+++++..+|+.+. .+.++||+|+++.
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~np 294 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNL 294 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEEC
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECC
Confidence 34568999999999999999988665 99999999999999999999888777899999999984 4457899999988
Q ss_pred cccccC------hhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEee
Q 024021 183 FFCAIE------PEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 183 ~~~~~~------~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 248 (274)
++.... .+....+++.+.++| +|.+++... +.+.+.+.++..||+..+...
T Consensus 295 Pyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~-------------~~~~~~~~~~~~G~~~~~~~~ 351 (373)
T 3tm4_A 295 PYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT-------------EKKAIEEAIAENGFEIIHHRV 351 (373)
T ss_dssp CCC------CCHHHHHHHHHHHHHHHE--EEEEEEEES-------------CHHHHHHHHHHTTEEEEEEEE
T ss_pred CCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC-------------CHHHHHHHHHHcCCEEEEEEE
Confidence 765421 122367888899988 444444431 678889999999999877544
No 178
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.51 E-value=5.3e-14 Score=121.89 Aligned_cols=114 Identities=19% Similarity=0.184 Sum_probs=91.6
Q ss_pred HHHHHhcC-CCCCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCC
Q 024021 98 IVHLHQSG-ALPKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTEL 174 (274)
Q Consensus 98 ~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 174 (274)
...++... ..++.+|||+|||+|.++..+++. ..+|+++|+++.+++.++++....+. .++++.+|+.+.. .++
T Consensus 185 ~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~--~~~~~~~d~~~~~-~~~ 261 (343)
T 2pjd_A 185 SQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGV--EGEVFASNVFSEV-KGR 261 (343)
T ss_dssp HHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTC--CCEEEECSTTTTC-CSC
T ss_pred HHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC--CCEEEEccccccc-cCC
Confidence 33444433 334579999999999999999873 46999999999999999999877664 3677889987744 578
Q ss_pred eeEEEeccccccc---ChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 175 FDLIFDYTFFCAI---EPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 175 ~D~v~~~~~~~~~---~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
||+|+++.++++. +.+....+++++.++|+|||.+++...
T Consensus 262 fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 262 FDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp EEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred eeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 9999999998752 335567899999999999999998764
No 179
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.51 E-value=5.3e-14 Score=116.30 Aligned_cols=102 Identities=15% Similarity=0.182 Sum_probs=85.4
Q ss_pred CCCCeEEEEcCCcchhHHHhhC--C-CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC--------CCCe
Q 024021 107 LPKGRALVPGCGTGYDVVAMAS--P-ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP--------TELF 175 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~--~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~--------~~~~ 175 (274)
.++.+|||+|||+|..+..+++ + +.+|+++|+++.+++.|++++...+..++++++.+|..+..+ .++|
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 157 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSY 157 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCB
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCE
Confidence 3567999999999999998887 3 789999999999999999999888777789999999876321 5789
Q ss_pred eEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024021 176 DLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 176 D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 213 (274)
|+|++.... .....+++.+.++|+|||++++..
T Consensus 158 D~V~~d~~~-----~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 158 DFIFVDADK-----DNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp SEEEECSCS-----TTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEEEcCch-----HHHHHHHHHHHHhCCCCeEEEEec
Confidence 999986542 234678899999999999998854
No 180
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.51 E-value=1.4e-13 Score=119.74 Aligned_cols=127 Identities=20% Similarity=0.154 Sum_probs=101.5
Q ss_pred CCCCeEEEEcCCcchhHHHhhC---CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-CCCCCeeEEEecc
Q 024021 107 LPKGRALVPGCGTGYDVVAMAS---PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-CPTELFDLIFDYT 182 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~ 182 (274)
.++.+|||+|||+|.++..++. ++.+++|+|+++.+++.|++++...++. ++++..+|+.+. .+.+.||+|+++.
T Consensus 202 ~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~~~~~~~~~~~D~Ii~np 280 (354)
T 3tma_A 202 RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADARHLPRFFPEVDRILANP 280 (354)
T ss_dssp CTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCGGGGGGTCCCCSEEEECC
T ss_pred CCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCChhhCccccCCCCEEEECC
Confidence 4567999999999999998887 3479999999999999999999988876 899999999984 3456689999998
Q ss_pred cccccCh------hHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEee
Q 024021 183 FFCAIEP------EMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 183 ~~~~~~~------~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 248 (274)
++..... .....+++.+.++|+|||.+++.+. +.+.+.++++ .||+..+...
T Consensus 281 Pyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~-------------~~~~~~~~~~-~g~~~~~~~~ 338 (354)
T 3tma_A 281 PHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL-------------RPALLKRALP-PGFALRHARV 338 (354)
T ss_dssp CSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES-------------CHHHHHHHCC-TTEEEEEEEE
T ss_pred CCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC-------------CHHHHHHHhh-cCcEEEEEEE
Confidence 8764211 1236788999999999999999862 4555666666 8888766544
No 181
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.51 E-value=7.8e-14 Score=117.61 Aligned_cols=120 Identities=14% Similarity=0.159 Sum_probs=93.3
Q ss_pred CCCeEEEEcCCcchhHHHhhCC-CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCe---eEEEeccc
Q 024021 108 PKGRALVPGCGTGYDVVAMASP-ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELF---DLIFDYTF 183 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---D~v~~~~~ 183 (274)
++.+|||+|||+|..+..+++. +.+|+++|+|+.+++.|+++....+..++++|+.+|+.+..+ ++| |+|+++..
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~-~~f~~~D~IvsnPP 201 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFK-EKFASIEMILSNPP 201 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGG-GGTTTCCEEEECCC
T ss_pred CCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcc-cccCCCCEEEEcCC
Confidence 4579999999999999998874 789999999999999999999888776679999999988543 478 99999855
Q ss_pred cccc-----------ChhH------HHHHHHHHH-hcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcC
Q 024021 184 FCAI-----------EPEM------RAAWAQKIK-DFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPM 239 (274)
Q Consensus 184 ~~~~-----------~~~~------~~~~l~~~~-~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 239 (274)
+... +... ...+++++. +.|+|||.+++.. +.. ..+++.+++++.
T Consensus 202 yi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~-~~~----------q~~~v~~~~~~~ 264 (284)
T 1nv8_A 202 YVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEI-GED----------QVEELKKIVSDT 264 (284)
T ss_dssp CBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEEC-CTT----------CHHHHTTTSTTC
T ss_pred CCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEE-Cch----------HHHHHHHHHHhC
Confidence 4421 1110 116789999 9999999999754 111 355676777664
No 182
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.51 E-value=1.1e-14 Score=120.01 Aligned_cols=104 Identities=16% Similarity=0.120 Sum_probs=87.1
Q ss_pred CCCCeEEEEcCCcchhHHHhhC---CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-------CCCee
Q 024021 107 LPKGRALVPGCGTGYDVVAMAS---PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP-------TELFD 176 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-------~~~~D 176 (274)
.++.+|||+|||+|..+..+++ .+.+|+++|+++.+++.|++++...+..++++++.+|+.+..+ .++||
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD 138 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFD 138 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEE
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEe
Confidence 3467999999999999999987 3679999999999999999999888877789999999976322 47899
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEcc
Q 024021 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFP 215 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 215 (274)
+|++... ......+++.+.++|+|||++++.+..
T Consensus 139 ~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~d~~~ 172 (242)
T 3r3h_A 139 FIFIDAD-----KTNYLNYYELALKLVTPKGLIAIDNIF 172 (242)
T ss_dssp EEEEESC-----GGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred EEEEcCC-----hHHhHHHHHHHHHhcCCCeEEEEECCc
Confidence 9997654 234457899999999999999986543
No 183
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.50 E-value=1.6e-13 Score=114.57 Aligned_cols=129 Identities=24% Similarity=0.218 Sum_probs=96.2
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCCCCeeEEEeccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPTELFDLIFDYTF 183 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~v~~~~~ 183 (274)
.++.+|||+|||+|..+..+++. +.+++++|+++.+++.|+++. .++.+..+|+.+ ..+.++||+|++..+
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 157 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY------PQVTFCVASSHRLPFSDTSMDAIIRIYA 157 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC------TTSEEEECCTTSCSBCTTCEEEEEEESC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC------CCcEEEEcchhhCCCCCCceeEEEEeCC
Confidence 45689999999999999998874 789999999999999999875 458899999887 345678999998665
Q ss_pred ccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC------CCCCCcccCHHHHHHHHhcCCCcEEEEeecccccC
Q 024021 184 FCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH------VGGPPYKVSVSDYEEVLQPMGFQAISIVDNKLAIG 254 (274)
Q Consensus 184 ~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~ 254 (274)
.. .++++.++|+|||.+++........ .......... ..+..+||+++..........
T Consensus 158 ~~---------~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~gf~~~~~~~~~~~~~ 221 (269)
T 1p91_A 158 PC---------KAEELARVVKPGGWVITATPGPRHLMELKGLIYNEVHLHAP----HAEQLEGFTLQQSAELCYPMR 221 (269)
T ss_dssp CC---------CHHHHHHHEEEEEEEEEEEECTTTTHHHHTTTCSSCCCCCC----CCCCCTTEEEEEEEEEEEEEE
T ss_pred hh---------hHHHHHHhcCCCcEEEEEEcCHHHHHHHHHHhhcccccccc----hhhHhcCCcEEEEEEEEEEEE
Confidence 32 3688999999999999987654321 0000000000 345678999988877655544
No 184
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.50 E-value=1e-13 Score=113.12 Aligned_cols=139 Identities=11% Similarity=0.022 Sum_probs=106.0
Q ss_pred CCCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFF 184 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~ 184 (274)
.++.+|||+|||+|-++..++. +..+|+++|+++.+++.+++++..++. +.++...|+....+.++||+++++-++
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~--~~~~~v~D~~~~~p~~~~DvaL~lkti 208 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNV--PHRTNVADLLEDRLDEPADVTLLLKTL 208 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTC--CEEEEECCTTTSCCCSCCSEEEETTCH
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCC--CceEEEeeecccCCCCCcchHHHHHHH
Confidence 3467999999999999988876 566999999999999999999988774 489999999988888999999999999
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEee
Q 024021 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 185 ~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 248 (274)
+++++......+ ++.+.|+++|+++......-....-.....-.+.+.+.+.+.|+.+.+.+-
T Consensus 209 ~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ksl~Grs~gm~~~Y~~~~e~~~~~~g~~~~~~~~ 271 (281)
T 3lcv_B 209 PCLETQQRGSGW-EVIDIVNSPNIVVTFPTKSLGQRSKGMFQNYSQSFESQARERSCRIQRLEI 271 (281)
T ss_dssp HHHHHHSTTHHH-HHHHHSSCSEEEEEEECC-------CHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred HHhhhhhhHHHH-HHHHHhCCCCEEEeccchhhcCCCcchhhHHHHHHHHHHHhcCCceeeeee
Confidence 999755444555 899999999988765531111101011112357888888888996655543
No 185
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.50 E-value=6.5e-14 Score=121.86 Aligned_cols=118 Identities=16% Similarity=0.109 Sum_probs=88.6
Q ss_pred HHHHHHHhcC-CCCCCeEEEEcCCcchhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhh-------cCCC-CcceEEEEc
Q 024021 96 PIIVHLHQSG-ALPKGRALVPGCGTGYDVVAMAS-PER-YVVGLEISDIAIKKAEELSS-------SLPN-AKFVSFLKA 164 (274)
Q Consensus 96 ~~~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~-~~~-~v~~vD~~~~~~~~a~~~~~-------~~~~-~~~~~~~~~ 164 (274)
..+..++... ..++.+|||+|||+|..+..++. .+. +++|||+++.+++.|+++.. ..+. ..+++|+++
T Consensus 160 ~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~G 239 (438)
T 3uwp_A 160 DLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERG 239 (438)
T ss_dssp HHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEEC
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEEC
Confidence 3355555544 34568999999999999998875 555 59999999999999987542 2333 257999999
Q ss_pred ccCCCCCC---CCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccC
Q 024021 165 DFFTWCPT---ELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPI 216 (274)
Q Consensus 165 d~~~~~~~---~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 216 (274)
|+.+.... ..||+|+++.++. . +.....+.++.+.|+|||+|++.+.-.
T Consensus 240 D~~~lp~~d~~~~aDVVf~Nn~~F--~-pdl~~aL~Ei~RvLKPGGrIVssE~f~ 291 (438)
T 3uwp_A 240 DFLSEEWRERIANTSVIFVNNFAF--G-PEVDHQLKERFANMKEGGRIVSSKPFA 291 (438)
T ss_dssp CTTSHHHHHHHHTCSEEEECCTTC--C-HHHHHHHHHHHTTSCTTCEEEESSCSS
T ss_pred cccCCccccccCCccEEEEccccc--C-chHHHHHHHHHHcCCCCcEEEEeeccc
Confidence 99883321 3699999987753 3 345667789999999999999865433
No 186
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.50 E-value=8.4e-14 Score=114.81 Aligned_cols=124 Identities=19% Similarity=0.186 Sum_probs=99.0
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC-CCCCeeEEEeccccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC-PTELFDLIFDYTFFC 185 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~~ 185 (274)
.++.+|||+|||+|..+..+++.+.+++++|+++.+++.|+++....+..+++++..+|+.+.. +.++||+|++...
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~-- 167 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVDVR-- 167 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEECSS--
T ss_pred CCCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEECCc--
Confidence 4568999999999999998887777999999999999999999887766568999999998865 5678999997422
Q ss_pred ccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEee
Q 024021 186 AIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 186 ~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 248 (274)
....+++.+.++|+|||.+++..... ....++.+.+++. |..+....
T Consensus 168 -----~~~~~l~~~~~~L~~gG~l~~~~~~~----------~~~~~~~~~l~~~-f~~~~~~~ 214 (248)
T 2yvl_A 168 -----EPWHYLEKVHKSLMEGAPVGFLLPTA----------NQVIKLLESIENY-FGNLEVVE 214 (248)
T ss_dssp -----CGGGGHHHHHHHBCTTCEEEEEESSH----------HHHHHHHHHSTTT-EEEEEEEE
T ss_pred -----CHHHHHHHHHHHcCCCCEEEEEeCCH----------HHHHHHHHHHHhh-CCcceEEE
Confidence 12357899999999999999987322 1345677777776 77665543
No 187
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.49 E-value=2.6e-13 Score=119.27 Aligned_cols=137 Identities=9% Similarity=-0.044 Sum_probs=102.3
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCc-ceEEEEcccCCCCC-----CCCeeEEE
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAK-FVSFLKADFFTWCP-----TELFDLIF 179 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~-~~~~~~~d~~~~~~-----~~~~D~v~ 179 (274)
.++.+|||+|||+|.++..++..++ +|+++|+++.+++.|++++..++..+ +++|+.+|+.+..+ ..+||+|+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 4568999999999999999998666 89999999999999999999887765 89999999977321 35899999
Q ss_pred eccccc-----ccCh--hHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEee
Q 024021 180 DYTFFC-----AIEP--EMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 180 ~~~~~~-----~~~~--~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 248 (274)
+..... .... .....++..+.++|+|||++++.+...... ...-.+.+.+.+..+|..++....
T Consensus 291 ~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~-----~~~~~~~i~~~~~~~g~~~~~~~~ 361 (385)
T 2b78_A 291 IDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMT-----VSQFKKQIEKGFGKQKHTYLDLQQ 361 (385)
T ss_dssp ECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSC-----HHHHHHHHHHHHTTCCCEEEEEEC
T ss_pred ECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCC-----HHHHHHHHHHHHHHcCCcEEEeCC
Confidence 976652 2221 234567888899999999999987544211 001124455667778888555443
No 188
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.49 E-value=2e-13 Score=115.55 Aligned_cols=133 Identities=14% Similarity=0.105 Sum_probs=91.4
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhcCC----CCcceEEEEcccCCCC--CCCCeeEE
Q 024021 107 LPKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSSLP----NAKFVSFLKADFFTWC--PTELFDLI 178 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~~~~~~~d~~~~~--~~~~~D~v 178 (274)
.++.+|||||||+|..+..+++. ..+|+++|+++.+++.|+++++..+ ..++++++.+|..+.. ..++||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 34689999999999999999883 4589999999999999999876431 2358999999998743 35789999
Q ss_pred EecccccccChhHH--HHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEE
Q 024021 179 FDYTFFCAIEPEMR--AAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISI 246 (274)
Q Consensus 179 ~~~~~~~~~~~~~~--~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 246 (274)
++.......+.... ..+++.+.++|+|||++++...+.... .-....+.+.+++. |..+..
T Consensus 162 i~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~------~~~~~~~~~~l~~~-F~~v~~ 224 (294)
T 3adn_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQ------QEEAIDSHRKLSHY-FSDVGF 224 (294)
T ss_dssp EECC----------CCHHHHHHHHHTEEEEEEEEEEEEECSSC------CHHHHHHHHHHHHH-CSEEEE
T ss_pred EECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecCCcccc------hHHHHHHHHHHHHH-CCCeEE
Confidence 99655332222222 678999999999999999876322110 01234555556554 555543
No 189
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.49 E-value=8e-14 Score=114.06 Aligned_cols=102 Identities=21% Similarity=0.282 Sum_probs=86.2
Q ss_pred CCCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC----CCCeeEEEe
Q 024021 107 LPKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP----TELFDLIFD 180 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~D~v~~ 180 (274)
.++.+|||+|||+|..+..+++ ++.+|+++|+++.+++.|++++...+..++++++.+|+.+..+ .++||+|++
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 132 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFI 132 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEE
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEE
Confidence 3567999999999999999887 3789999999999999999999887776789999999987321 468999998
Q ss_pred cccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024021 181 YTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 181 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 213 (274)
..... ....+++.+.++|+|||.+++.+
T Consensus 133 ~~~~~-----~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 133 DAAKG-----QYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp EGGGS-----CHHHHHHHHGGGEEEEEEEEEET
T ss_pred CCCHH-----HHHHHHHHHHHHcCCCeEEEEEc
Confidence 76643 33578899999999999999864
No 190
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.49 E-value=1.1e-13 Score=118.60 Aligned_cols=110 Identities=22% Similarity=0.146 Sum_probs=88.8
Q ss_pred HHHHHhcC-CCCCCeEEEEcCCcchhHHHhhCC---CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-CCC
Q 024021 98 IVHLHQSG-ALPKGRALVPGCGTGYDVVAMASP---ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-CPT 172 (274)
Q Consensus 98 ~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~ 172 (274)
...++... ..++.+|||+|||+|..+..+++. ..+|+++|+++++++.|+++....+.. ++++..+|+.+. ...
T Consensus 64 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~-~v~~~~~d~~~~~~~~ 142 (317)
T 1dl5_A 64 MALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIE-NVIFVCGDGYYGVPEF 142 (317)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCGGG
T ss_pred HHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CeEEEECChhhccccC
Confidence 33444443 345689999999999999999873 346999999999999999998877654 499999999873 345
Q ss_pred CCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccC
Q 024021 173 ELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPI 216 (274)
Q Consensus 173 ~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 216 (274)
++||+|++..++++++ +.+.++|+|||++++...+.
T Consensus 143 ~~fD~Iv~~~~~~~~~--------~~~~~~LkpgG~lvi~~~~~ 178 (317)
T 1dl5_A 143 SPYDVIFVTVGVDEVP--------ETWFTQLKEGGRVIVPINLK 178 (317)
T ss_dssp CCEEEEEECSBBSCCC--------HHHHHHEEEEEEEEEEBCBG
T ss_pred CCeEEEEEcCCHHHHH--------HHHHHhcCCCcEEEEEECCC
Confidence 7899999999999886 46788999999999976544
No 191
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.49 E-value=2.2e-13 Score=111.70 Aligned_cols=101 Identities=19% Similarity=0.118 Sum_probs=83.6
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCCC-CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-CCCeeEEEeccc
Q 024021 106 ALPKGRALVPGCGTGYDVVAMASPE-RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP-TELFDLIFDYTF 183 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~ 183 (274)
..++.+|||+|||+|..+..+++.+ .+|+++|+++.+++.|+++....+.. ++++..+|+....+ ..+||+|++..+
T Consensus 89 ~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~fD~Ii~~~~ 167 (235)
T 1jg1_A 89 LKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVK-NVHVILGDGSKGFPPKAPYDVIIVTAG 167 (235)
T ss_dssp CCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCGGGCCEEEEEECSB
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCC-CcEEEECCcccCCCCCCCccEEEECCc
Confidence 3456799999999999999998854 89999999999999999998776653 49999999844333 345999999999
Q ss_pred ccccChhHHHHHHHHHHhcccCCcEEEEEEcc
Q 024021 184 FCAIEPEMRAAWAQKIKDFLKPDGELITLMFP 215 (274)
Q Consensus 184 ~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 215 (274)
+++++ +.+.+.|+|||++++....
T Consensus 168 ~~~~~--------~~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 168 APKIP--------EPLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp BSSCC--------HHHHHTEEEEEEEEEEECS
T ss_pred HHHHH--------HHHHHhcCCCcEEEEEEec
Confidence 88875 2678899999999998743
No 192
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.49 E-value=7.8e-14 Score=112.32 Aligned_cols=100 Identities=17% Similarity=0.130 Sum_probs=82.9
Q ss_pred CCCeEEEEcCCcchhHHHhhCC---CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC--CCCCCeeEEEecc
Q 024021 108 PKGRALVPGCGTGYDVVAMASP---ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW--CPTELFDLIFDYT 182 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~D~v~~~~ 182 (274)
++.+|||+|||+|..+..+++. +.+|+++|+++.+++.|+++....+..++++++.+|..+. ...+ ||+|++..
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~ 134 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDC 134 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEET
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcC
Confidence 4679999999999999999873 7799999999999999999987766666899999998762 2345 99999864
Q ss_pred cccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024021 183 FFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 183 ~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 213 (274)
.. .....+++.+.++|+|||++++..
T Consensus 135 ~~-----~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 135 DV-----FNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp TT-----SCHHHHHHHHGGGEEEEEEEEEES
T ss_pred Ch-----hhhHHHHHHHHHhcCCCeEEEEEC
Confidence 32 234678999999999999998854
No 193
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.48 E-value=1.1e-13 Score=108.30 Aligned_cols=119 Identities=14% Similarity=0.029 Sum_probs=92.1
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-C---CCCCeeEEEec
Q 024021 106 ALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-C---PTELFDLIFDY 181 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~---~~~~~D~v~~~ 181 (274)
..++.+|||+|||. +++|+++.+++.|+++... ++++..+|+.+. . ++++||+|++.
T Consensus 10 ~~~g~~vL~~~~g~--------------v~vD~s~~ml~~a~~~~~~-----~~~~~~~d~~~~~~~~~~~~~fD~V~~~ 70 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS--------------SPVEALKGLVDKLQALTGN-----EGRVSVENIKQLLQSAHKESSFDIILSG 70 (176)
T ss_dssp CCTTSEEEEEECTT--------------SCHHHHHHHHHHHHHHTTT-----TSEEEEEEGGGGGGGCCCSSCEEEEEEC
T ss_pred CCCCCEEEEecCCc--------------eeeeCCHHHHHHHHHhccc-----CcEEEEechhcCccccCCCCCEeEEEEC
Confidence 34568999999986 2399999999999998642 389999999873 3 56789999999
Q ss_pred cccccc-ChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEee
Q 024021 182 TFFCAI-EPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 182 ~~~~~~-~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 248 (274)
.+++++ ++. ..++++++++|||||++++....... .....+..+.+++.++++++|| +. +..
T Consensus 71 ~~l~~~~~~~--~~~l~~~~r~LkpgG~l~~~~~~~~~-~~~~~~~~~~~~~~~~l~~aGf-i~-~~~ 133 (176)
T 2ld4_A 71 LVPGSTTLHS--AEILAEIARILRPGGCLFLKEPVETA-VDNNSKVKTASKLCSALTLSGL-VE-VKE 133 (176)
T ss_dssp CSTTCCCCCC--HHHHHHHHHHEEEEEEEEEEEEEESS-SCSSSSSCCHHHHHHHHHHTTC-EE-EEE
T ss_pred ChhhhcccCH--HHHHHHHHHHCCCCEEEEEEcccccc-cccccccCCHHHHHHHHHHCCC-cE-eec
Confidence 999998 433 67899999999999999985432211 1113344578999999999999 44 443
No 194
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.48 E-value=1e-12 Score=115.02 Aligned_cols=128 Identities=14% Similarity=0.087 Sum_probs=100.3
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCC--CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC---CCCeeEEEec
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPE--RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP---TELFDLIFDY 181 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~D~v~~~ 181 (274)
.++.+|||+| |+|.++..++..+ .+|+++|+++.+++.|+++....+.. +++++.+|+.+..+ .++||+|+++
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~l~~~~~~~fD~Vi~~ 248 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYE-DIEIFTFDLRKPLPDYALHKFDTFITD 248 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCC-CEEEECCCTTSCCCTTTSSCBSEEEEC
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CEEEEEChhhhhchhhccCCccEEEEC
Confidence 4568999999 9999999988743 59999999999999999999877664 79999999988332 3589999999
Q ss_pred ccccccChhHHHHHHHHHHhcccCCcEE-EEEEccCCCCCCCCCcccCH---HHHHHHHh-cCCCcEEEEee
Q 024021 182 TFFCAIEPEMRAAWAQKIKDFLKPDGEL-ITLMFPISDHVGGPPYKVSV---SDYEEVLQ-PMGFQAISIVD 248 (274)
Q Consensus 182 ~~~~~~~~~~~~~~l~~~~~~L~pgG~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~l~-~~Gf~~~~~~~ 248 (274)
.+++.. ....+++++.++|+|||.+ ++...... .+. .++.+.++ ..||.+..+..
T Consensus 249 ~p~~~~---~~~~~l~~~~~~LkpgG~~~~~~~~~~~---------~~~~~~~~~~~~l~~~~g~~~~~~~~ 308 (373)
T 2qm3_A 249 PPETLE---AIRAFVGRGIATLKGPRCAGYFGITRRE---------SSLDKWREIQKLLLNEFNVVITDIIR 308 (373)
T ss_dssp CCSSHH---HHHHHHHHHHHTBCSTTCEEEEEECTTT---------CCHHHHHHHHHHHHHTSCCEEEEEEE
T ss_pred CCCchH---HHHHHHHHHHHHcccCCeEEEEEEecCc---------CCHHHHHHHHHHHHHhcCcchhhhhh
Confidence 876543 2478899999999999954 44443210 144 67778888 88998866544
No 195
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.47 E-value=1.6e-14 Score=118.23 Aligned_cols=147 Identities=13% Similarity=0.079 Sum_probs=95.0
Q ss_pred HHHHHHhcCC--CCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCC--CcceEEEE-cccCCCC
Q 024021 97 IIVHLHQSGA--LPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPN--AKFVSFLK-ADFFTWC 170 (274)
Q Consensus 97 ~~~~~~~~~~--~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~~-~d~~~~~ 170 (274)
.+...+.... .++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.++++.+.... ..++.+.. .|+..
T Consensus 24 kL~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~-- 101 (232)
T 3opn_A 24 KLEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQ-- 101 (232)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCS--
T ss_pred HHHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCc--
Confidence 3445554432 3457999999999999999988875 999999999999998876532110 01122222 22211
Q ss_pred CCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC------CCCC-----CcccCHHHHHHHHhcC
Q 024021 171 PTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH------VGGP-----PYKVSVSDYEEVLQPM 239 (274)
Q Consensus 171 ~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~------~~~~-----~~~~~~~~~~~~l~~~ 239 (274)
..||.+.+..++..+ ..++.++.++|+|||.+++...+.... ..|. .+..+.+++.++++++
T Consensus 102 --~~~d~~~~D~v~~~l-----~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~a 174 (232)
T 3opn_A 102 --GRPSFTSIDVSFISL-----DLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQL 174 (232)
T ss_dssp --CCCSEEEECCSSSCG-----GGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred --CCCCEEEEEEEhhhH-----HHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHC
Confidence 124555554444444 467899999999999999864211100 0111 0123678999999999
Q ss_pred CCcEEEEeecccc
Q 024021 240 GFQAISIVDNKLA 252 (274)
Q Consensus 240 Gf~~~~~~~~~~~ 252 (274)
||+++.+...+..
T Consensus 175 Gf~v~~~~~~pi~ 187 (232)
T 3opn_A 175 GFSVKGLTFSPIK 187 (232)
T ss_dssp TEEEEEEEECSSC
T ss_pred CCEEEEEEEccCC
Confidence 9999988775443
No 196
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.47 E-value=3e-13 Score=116.77 Aligned_cols=122 Identities=9% Similarity=-0.039 Sum_probs=98.3
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFCA 186 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~ 186 (274)
.++.+|||+|||+|.++.. ++.+.+|+++|+++.+++.|++++..++..++++++.+|+.+.. ++||+|++......
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~--~~fD~Vi~dpP~~~ 270 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD--VKGNRVIMNLPKFA 270 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC--CCEEEEEECCTTTG
T ss_pred CCCCEEEEccCccCHHHHh-ccCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc--CCCcEEEECCcHhH
Confidence 3568999999999999999 88666999999999999999999998887678999999998865 78999998654322
Q ss_pred cChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcC-CCcEEEEee
Q 024021 187 IEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPM-GFQAISIVD 248 (274)
Q Consensus 187 ~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gf~~~~~~~ 248 (274)
..++..+.++|+|||.+++.++... .+.+.+.++++ ||.++.+..
T Consensus 271 ------~~~l~~~~~~L~~gG~l~~~~~~~~-----------~~~~~~~l~~~~~~~i~~~~~ 316 (336)
T 2yx1_A 271 ------HKFIDKALDIVEEGGVIHYYTIGKD-----------FDKAIKLFEKKCDCEVLEKRI 316 (336)
T ss_dssp ------GGGHHHHHHHEEEEEEEEEEEEESS-----------SHHHHHHHHHHSEEEEEEEEE
T ss_pred ------HHHHHHHHHHcCCCCEEEEEEeecC-----------chHHHHHHHHhcCCcEEEEEE
Confidence 2578889999999999998776542 34555666666 777655444
No 197
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.46 E-value=1.2e-13 Score=113.47 Aligned_cols=102 Identities=13% Similarity=0.162 Sum_probs=85.3
Q ss_pred CCCCeEEEEcCCcchhHHHhhC--C-CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC--------CCCCe
Q 024021 107 LPKGRALVPGCGTGYDVVAMAS--P-ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC--------PTELF 175 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~--~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--------~~~~~ 175 (274)
.++.+|||+|||+|..+..+++ + +.+++++|+++.+++.|++++...+..++++++.+|..+.. ..++|
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 148 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSY 148 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCE
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCc
Confidence 3567999999999999999886 3 78999999999999999999988877778999999987621 14789
Q ss_pred eEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024021 176 DLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 176 D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 213 (274)
|+|++... ......+++.+.++|+|||++++..
T Consensus 149 D~I~~d~~-----~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 149 DFGFVDAD-----KPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEEEECSC-----GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CEEEECCc-----hHHHHHHHHHHHHhcCCCeEEEEec
Confidence 99997643 2345678999999999999998854
No 198
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.46 E-value=5.6e-13 Score=114.01 Aligned_cols=134 Identities=12% Similarity=0.090 Sum_probs=100.9
Q ss_pred CCCCCeEEEEcCCcchhHHHhhC---CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC-CCCCeeEEEec
Q 024021 106 ALPKGRALVPGCGTGYDVVAMAS---PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC-PTELFDLIFDY 181 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~ 181 (274)
..++.+|||+|||+|..+..+++ .+.+|+++|+++.+++.++++....+.. +++++.+|+.+.. ..++||+|++.
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~~~~~~~fD~Il~d 194 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVL-NVILFHSSSLHIGELNVEFDKILLD 194 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCC-SEEEESSCGGGGGGGCCCEEEEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-eEEEEECChhhcccccccCCEEEEe
Confidence 45568999999999999999886 3479999999999999999998876653 6999999998743 35689999985
Q ss_pred cc------ccccCh-------h-------HHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCC
Q 024021 182 TF------FCAIEP-------E-------MRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGF 241 (274)
Q Consensus 182 ~~------~~~~~~-------~-------~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf 241 (274)
.. +...++ . ....+++.+.++|+|||++++.+.+... .-..+.+...++..||
T Consensus 195 ~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~-------~Ene~~v~~~l~~~~~ 267 (315)
T 1ixk_A 195 APCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEP-------EENEFVIQWALDNFDV 267 (315)
T ss_dssp CCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCG-------GGTHHHHHHHHHHSSE
T ss_pred CCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCCh-------HHhHHHHHHHHhcCCC
Confidence 33 221111 1 1258899999999999999987754321 1145567788899998
Q ss_pred cEEEEe
Q 024021 242 QAISIV 247 (274)
Q Consensus 242 ~~~~~~ 247 (274)
+.+.+.
T Consensus 268 ~~~~~~ 273 (315)
T 1ixk_A 268 ELLPLK 273 (315)
T ss_dssp EEECCC
T ss_pred EEecCC
Confidence 877654
No 199
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.46 E-value=3.1e-13 Score=113.37 Aligned_cols=143 Identities=17% Similarity=0.096 Sum_probs=103.3
Q ss_pred cHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhC--CC-CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC
Q 024021 95 APIIVHLHQSGALPKGRALVPGCGTGYDVVAMAS--PE-RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP 171 (274)
Q Consensus 95 ~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~--~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 171 (274)
...+..++. ..++.+|||+|||+|..+..+++ .+ .+|+++|+++.+++.++++....+.. +++++.+|+.+...
T Consensus 72 s~l~~~~l~--~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~ 148 (274)
T 3ajd_A 72 SMIPPIVLN--PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL-NTIIINADMRKYKD 148 (274)
T ss_dssp GGHHHHHHC--CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCHHHHHH
T ss_pred HHHHHHHhC--CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC-cEEEEeCChHhcch
Confidence 333444443 45668999999999999998886 45 69999999999999999999887654 79999999977432
Q ss_pred -----CCCeeEEEeccccccc---C------h-------hHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHH
Q 024021 172 -----TELFDLIFDYTFFCAI---E------P-------EMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVS 230 (274)
Q Consensus 172 -----~~~~D~v~~~~~~~~~---~------~-------~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~ 230 (274)
.++||+|++....... . . .....+++.+.++|+|||.+++.+.+.... -+.+
T Consensus 149 ~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~-------ene~ 221 (274)
T 3ajd_A 149 YLLKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVE-------ENEE 221 (274)
T ss_dssp HHHHTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTT-------SSHH
T ss_pred hhhhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChH-------HhHH
Confidence 5689999987443221 0 0 123578999999999999999887544211 1355
Q ss_pred HHHHHHhcC-CCcEEEEe
Q 024021 231 DYEEVLQPM-GFQAISIV 247 (274)
Q Consensus 231 ~~~~~l~~~-Gf~~~~~~ 247 (274)
.+.+.++.+ +|+++.+.
T Consensus 222 ~v~~~l~~~~~~~~~~~~ 239 (274)
T 3ajd_A 222 VIKYILQKRNDVELIIIK 239 (274)
T ss_dssp HHHHHHHHCSSEEEECCC
T ss_pred HHHHHHHhCCCcEEecCc
Confidence 666777554 56665543
No 200
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.46 E-value=5.9e-13 Score=107.63 Aligned_cols=135 Identities=14% Similarity=0.007 Sum_probs=97.7
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFCA 186 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~ 186 (274)
.++.+|||+|||+|.++..+. .+.+|+++|+++.+++.++++....+ .+..+..+|.....++++||+|++.-++++
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~-~~~~y~a~DId~~~i~~ar~~~~~~g--~~~~~~v~D~~~~~~~~~~DvvLllk~lh~ 180 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER-GIASVWGCDIHQGLGDVITPFAREKD--WDFTFALQDVLCAPPAEAGDLALIFKLLPL 180 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT-TCSEEEEEESBHHHHHHHHHHHHHTT--CEEEEEECCTTTSCCCCBCSEEEEESCHHH
T ss_pred CCCCeEEEecCCccHHHHHhc-cCCeEEEEeCCHHHHHHHHHHHHhcC--CCceEEEeecccCCCCCCcchHHHHHHHHH
Confidence 456899999999999999888 77799999999999999999987766 568999999998777789999999988888
Q ss_pred cChhHHHHHHHHHHhcccCCcEEEEEEc-cCCCCCCCCCcccCHHHHHHHHhcCCCcEEEE
Q 024021 187 IEPEMRAAWAQKIKDFLKPDGELITLMF-PISDHVGGPPYKVSVSDYEEVLQPMGFQAISI 246 (274)
Q Consensus 187 ~~~~~~~~~l~~~~~~L~pgG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 246 (274)
++.......+ ++.+.|+++|+++.... .......+ ....-...+.+.+.+.++.+.+.
T Consensus 181 LE~q~~~~~~-~ll~aL~~~~vvVsfPtksl~Gr~~g-m~~~Y~~~~e~~~~~~~~~~~~~ 239 (253)
T 3frh_A 181 LEREQAGSAM-ALLQSLNTPRMAVSFPTRSLGGRGKG-MEANYAAWFEGGLPAEFEIEDKK 239 (253)
T ss_dssp HHHHSTTHHH-HHHHHCBCSEEEEEEECC------------CHHHHHHHHSCTTEEEEEEE
T ss_pred hhhhchhhHH-HHHHHhcCCCEEEEcChHHhcCCCcc-hhhHHHHHHHHHhhccchhhhhe
Confidence 8654433444 78889999987766541 11111000 11123466666666654544443
No 201
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.46 E-value=8.2e-14 Score=128.44 Aligned_cols=108 Identities=18% Similarity=0.217 Sum_probs=88.7
Q ss_pred CCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC---CCCCCeeEEEecccc
Q 024021 108 PKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW---CPTELFDLIFDYTFF 184 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~D~v~~~~~~ 184 (274)
.+.+|||||||.|.++..|++.|++|+|+|.++.+++.|+.+....+. .+++|.++++.+. ..+++||+|+|..++
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~~~a~~~~~-~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~ 144 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRALAEENPD-FAAEFRVGRIEEVIAALEEGEFDLAIGLSVF 144 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTSTT-SEEEEEECCHHHHHHHCCTTSCSEEEEESCH
T ss_pred CCCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHhcCC-CceEEEECCHHHHhhhccCCCccEEEECcch
Confidence 457999999999999999999999999999999999999999877653 2699999998773 456789999999999
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEccC
Q 024021 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMFPI 216 (274)
Q Consensus 185 ~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~ 216 (274)
+|++++.....+..+.+.|+++|..++.....
T Consensus 145 ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~ 176 (569)
T 4azs_A 145 HHIVHLHGIDEVKRLLSRLADVTQAVILELAV 176 (569)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHSSEEEEECCC
T ss_pred hcCCCHHHHHHHHHHHHHhccccceeeEEecc
Confidence 99976543344556777788888766655443
No 202
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.45 E-value=6.5e-13 Score=108.04 Aligned_cols=102 Identities=21% Similarity=0.166 Sum_probs=83.1
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCC---CCeEEEEeCChHHHHHHHHHhhcCCC----CcceEEEEcccCCC-CCCCCeeE
Q 024021 106 ALPKGRALVPGCGTGYDVVAMASP---ERYVVGLEISDIAIKKAEELSSSLPN----AKFVSFLKADFFTW-CPTELFDL 177 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~~~~~~~d~~~~-~~~~~~D~ 177 (274)
..++.+|||+|||+|..+..+++. ..+|+++|+++.+++.++++....+. ..++++..+|+... ...++||+
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 154 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDA 154 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCE
Confidence 345689999999999999988863 36999999999999999998866432 24799999998763 33568999
Q ss_pred EEecccccccChhHHHHHHHHHHhcccCCcEEEEEEcc
Q 024021 178 IFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFP 215 (274)
Q Consensus 178 v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 215 (274)
|++..++.++. +.+.++|+|||++++...+
T Consensus 155 i~~~~~~~~~~--------~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 155 IHVGAAAPVVP--------QALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp EEECSBBSSCC--------HHHHHTEEEEEEEEEEESC
T ss_pred EEECCchHHHH--------HHHHHhcCCCcEEEEEEec
Confidence 99998887663 5788999999999997743
No 203
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.45 E-value=1.2e-13 Score=113.61 Aligned_cols=102 Identities=19% Similarity=0.101 Sum_probs=84.6
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC---CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC------------
Q 024021 107 LPKGRALVPGCGTGYDVVAMASP---ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP------------ 171 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~------------ 171 (274)
.++.+|||+|||+|..+..+++. +.+|+++|+++.+++.|++++...+..++++++.+|+.+..+
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 138 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWA 138 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGG
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccc
Confidence 35689999999999999999873 679999999999999999998877766679999999865211
Q ss_pred -----C-CCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024021 172 -----T-ELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 172 -----~-~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 213 (274)
. ++||+|++..... ....+++.+.++|+|||++++..
T Consensus 139 ~~f~~~~~~fD~I~~~~~~~-----~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 139 SDFAFGPSSIDLFFLDADKE-----NYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp TTTCCSTTCEEEEEECSCGG-----GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccccCCCCCcCEEEEeCCHH-----HHHHHHHHHHHHcCCCeEEEEEc
Confidence 2 6899999875433 34578899999999999999865
No 204
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.45 E-value=2.6e-13 Score=110.47 Aligned_cols=102 Identities=25% Similarity=0.286 Sum_probs=83.9
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCCC-------CeEEEEeCChHHHHHHHHHhhcCCC----CcceEEEEcccCCC-----
Q 024021 106 ALPKGRALVPGCGTGYDVVAMASPE-------RYVVGLEISDIAIKKAEELSSSLPN----AKFVSFLKADFFTW----- 169 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~~-------~~v~~vD~~~~~~~~a~~~~~~~~~----~~~~~~~~~d~~~~----- 169 (274)
..++.+|||+|||+|..+..+++.. .+|+++|+++.+++.|+++....+. ..+++++.+|+.+.
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 157 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEK 157 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccC
Confidence 3456899999999999999888733 4999999999999999999876542 35799999999874
Q ss_pred CCCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEcc
Q 024021 170 CPTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFP 215 (274)
Q Consensus 170 ~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 215 (274)
...++||+|++...++++. +.+.++|+|||++++....
T Consensus 158 ~~~~~fD~I~~~~~~~~~~--------~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 158 KELGLFDAIHVGASASELP--------EILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp HHHCCEEEEEECSBBSSCC--------HHHHHHEEEEEEEEEEEEE
T ss_pred ccCCCcCEEEECCchHHHH--------HHHHHhcCCCcEEEEEEcc
Confidence 3456899999998887653 6788999999999987743
No 205
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.45 E-value=4.9e-13 Score=112.08 Aligned_cols=105 Identities=16% Similarity=0.007 Sum_probs=86.8
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccc
Q 024021 106 ALPKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTF 183 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~ 183 (274)
..++.+|||+|||+|.++..+++. +.+|+++|+++.+++.|++++..++.. ++.++.+|+.+....++||+|++..+
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~-~~~~~~~d~~~~~~~~~~D~Vi~d~p 195 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLN-NVIPILADNRDVELKDVADRVIMGYV 195 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCS-SEEEEESCGGGCCCTTCEEEEEECCC
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEECChHHcCccCCceEEEECCc
Confidence 345679999999999999999884 449999999999999999999887764 58899999988622468999998876
Q ss_pred ccccChhHHHHHHHHHHhcccCCcEEEEEEccCC
Q 024021 184 FCAIEPEMRAAWAQKIKDFLKPDGELITLMFPIS 217 (274)
Q Consensus 184 ~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~ 217 (274)
.. ...++..+.+.|+|||++++.++...
T Consensus 196 ~~------~~~~l~~~~~~LkpgG~l~~s~~~~~ 223 (272)
T 3a27_A 196 HK------THKFLDKTFEFLKDRGVIHYHETVAE 223 (272)
T ss_dssp SS------GGGGHHHHHHHEEEEEEEEEEEEEEG
T ss_pred cc------HHHHHHHHHHHcCCCCEEEEEEcCcc
Confidence 52 23567889999999999999886553
No 206
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.45 E-value=7e-13 Score=117.25 Aligned_cols=114 Identities=21% Similarity=0.143 Sum_probs=86.9
Q ss_pred HHHHHHhcCC-CCCCeEEEEcCCcchhHHHhhCC-C-CeEEEEeCChHHHHHH-------HHHhhcCCCC-cceEEEEcc
Q 024021 97 IIVHLHQSGA-LPKGRALVPGCGTGYDVVAMASP-E-RYVVGLEISDIAIKKA-------EELSSSLPNA-KFVSFLKAD 165 (274)
Q Consensus 97 ~~~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~~-~-~~v~~vD~~~~~~~~a-------~~~~~~~~~~-~~~~~~~~d 165 (274)
.+..++.... .++.+|||+|||+|..+..+++. + .+|+|+|+++.+++.| ++++...++. .+++++.+|
T Consensus 230 ~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD 309 (433)
T 1u2z_A 230 FLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKK 309 (433)
T ss_dssp HHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESS
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcC
Confidence 3445555443 35679999999999999999872 3 4899999999999999 8887776643 579999876
Q ss_pred cCC-C--C--CCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024021 166 FFT-W--C--PTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 166 ~~~-~--~--~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 213 (274)
... . . ..++||+|+++.++. . +....++.++.++|+|||++++..
T Consensus 310 ~~~~~~~~~~~~~~FDvIvvn~~l~--~-~d~~~~L~el~r~LKpGG~lVi~d 359 (433)
T 1u2z_A 310 SFVDNNRVAELIPQCDVILVNNFLF--D-EDLNKKVEKILQTAKVGCKIISLK 359 (433)
T ss_dssp CSTTCHHHHHHGGGCSEEEECCTTC--C-HHHHHHHHHHHTTCCTTCEEEESS
T ss_pred ccccccccccccCCCCEEEEeCccc--c-ccHHHHHHHHHHhCCCCeEEEEee
Confidence 542 1 1 246899999876652 2 455678899999999999999864
No 207
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.45 E-value=1.7e-13 Score=115.21 Aligned_cols=124 Identities=16% Similarity=0.168 Sum_probs=95.3
Q ss_pred CCCCeEEEEcCCcchhHHHhhC---CCCeEEEEeCChHHHHHHHHHhhcC-C-CCcceEEEEcccCCC-CCCCCeeEEEe
Q 024021 107 LPKGRALVPGCGTGYDVVAMAS---PERYVVGLEISDIAIKKAEELSSSL-P-NAKFVSFLKADFFTW-CPTELFDLIFD 180 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~-~-~~~~~~~~~~d~~~~-~~~~~~D~v~~ 180 (274)
.++.+|||+|||+|.++..+++ ++.+++++|+++.+++.|+++.... + ..+++++..+|+.+. .+.++||+|++
T Consensus 98 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~v~~ 177 (280)
T 1i9g_A 98 FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRAVL 177 (280)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEEEE
T ss_pred CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeEEEE
Confidence 4567999999999999998887 3679999999999999999998655 3 346799999999874 44678999997
Q ss_pred cccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhc-CCCcEEEEe
Q 024021 181 YTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQP-MGFQAISIV 247 (274)
Q Consensus 181 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gf~~~~~~ 247 (274)
... ....+++.+.++|+|||.+++...... ...++.+.++. .||..+++.
T Consensus 178 ~~~-------~~~~~l~~~~~~L~pgG~l~~~~~~~~----------~~~~~~~~l~~~~~f~~~~~~ 228 (280)
T 1i9g_A 178 DML-------APWEVLDAVSRLLVAGGVLMVYVATVT----------QLSRIVEALRAKQCWTEPRAW 228 (280)
T ss_dssp ESS-------CGGGGHHHHHHHEEEEEEEEEEESSHH----------HHHHHHHHHHHHSSBCCCEEE
T ss_pred CCc-------CHHHHHHHHHHhCCCCCEEEEEeCCHH----------HHHHHHHHHHhcCCcCCcEEE
Confidence 322 113678999999999999999874221 34456666666 788765544
No 208
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.44 E-value=3.9e-13 Score=118.64 Aligned_cols=136 Identities=17% Similarity=0.009 Sum_probs=101.8
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCC-CcceEEEEcccCCCCC-----CCCeeEEE
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPN-AKFVSFLKADFFTWCP-----TELFDLIF 179 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~~~d~~~~~~-----~~~~D~v~ 179 (274)
.++.+|||+|||+|.++..++..|+ +|+++|+++.+++.|++++..++. .++++++.+|+.+..+ .++||+|+
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 4568999999999999999998765 999999999999999999988876 5589999999987432 46899999
Q ss_pred ecccccccC-------hhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEe
Q 024021 180 DYTFFCAIE-------PEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIV 247 (274)
Q Consensus 180 ~~~~~~~~~-------~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 247 (274)
+..+..... ......++..+.+.|+|||++++.+.+.... .....+.+.+.+..+|+....+.
T Consensus 299 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-----~~~~~~~i~~~~~~~g~~~~~i~ 368 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMT-----SDLFQKIIADAAIDAGRDVQFIE 368 (396)
T ss_dssp ECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCC-----HHHHHHHHHHHHHHHTCCEEEEE
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCC-----HHHHHHHHHHHHHHcCCeEEEEE
Confidence 976542211 0345678899999999999999987544211 00013344456777786655443
No 209
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.44 E-value=2e-13 Score=111.31 Aligned_cols=103 Identities=20% Similarity=0.191 Sum_probs=85.1
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC---CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC----C---CCee
Q 024021 107 LPKGRALVPGCGTGYDVVAMASP---ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP----T---ELFD 176 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~----~---~~~D 176 (274)
.++.+|||+|||+|..+..+++. +.+++++|+++.+++.|++++...+..++++++.+|+.+..+ . ++||
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D 147 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFD 147 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEE
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCcc
Confidence 45689999999999999999873 679999999999999999999887776789999999865211 1 6899
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
+|++.... .....+++.+.++|+|||.+++...
T Consensus 148 ~v~~d~~~-----~~~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 148 VAVVDADK-----ENCSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp EEEECSCS-----TTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEEECCCH-----HHHHHHHHHHHHHcCCCeEEEEECC
Confidence 99986542 2345788999999999999998653
No 210
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.44 E-value=5.4e-13 Score=117.76 Aligned_cols=140 Identities=17% Similarity=0.024 Sum_probs=103.8
Q ss_pred HHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-----C
Q 024021 99 VHLHQSGALPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP-----T 172 (274)
Q Consensus 99 ~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-----~ 172 (274)
..++.....++.+|||+|||+|.++..++..|. +|+++|+++.+++.|++++..++..++++++.+|+.+..+ .
T Consensus 208 ~~~~~~~~~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~ 287 (396)
T 2as0_A 208 RLALEKWVQPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKG 287 (396)
T ss_dssp HHHHGGGCCTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTT
T ss_pred HHHHHHHhhCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhC
Confidence 344443333678999999999999999998765 9999999999999999999888775589999999987322 5
Q ss_pred CCeeEEEecccccccCh-------hHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHH----HHHHHHhcCCC
Q 024021 173 ELFDLIFDYTFFCAIEP-------EMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVS----DYEEVLQPMGF 241 (274)
Q Consensus 173 ~~~D~v~~~~~~~~~~~-------~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~Gf 241 (274)
++||+|++......... .....++..+.++|+|||.+++.+.... .+.+ .+.+.+...|.
T Consensus 288 ~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~---------~~~~~~~~~v~~~~~~~~~ 358 (396)
T 2as0_A 288 EKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQH---------VDLQMFKDMIIAAGAKAGK 358 (396)
T ss_dssp CCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTT---------SCHHHHHHHHHHHHHHTTE
T ss_pred CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCC---------CCHHHHHHHHHHHHHHcCC
Confidence 68999999765433221 3456788999999999999988875442 1233 34445566676
Q ss_pred cEEEEe
Q 024021 242 QAISIV 247 (274)
Q Consensus 242 ~~~~~~ 247 (274)
....+.
T Consensus 359 ~~~~i~ 364 (396)
T 2as0_A 359 FLKMLE 364 (396)
T ss_dssp EEEESS
T ss_pred eEEEEe
Confidence 654444
No 211
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.44 E-value=1.6e-13 Score=112.28 Aligned_cols=102 Identities=18% Similarity=0.105 Sum_probs=84.2
Q ss_pred CCCeEEEEcCCcchhHHHhhCC---CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-----CCC--CCeeE
Q 024021 108 PKGRALVPGCGTGYDVVAMASP---ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-----CPT--ELFDL 177 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-----~~~--~~~D~ 177 (274)
++.+|||+|||+|..+..+++. +.+++++|+++.+++.|+++....+..++++++.+|+.+. ... ++||+
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~ 151 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDL 151 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCE
Confidence 4679999999999999999873 6799999999999999999987776667899999997652 112 68999
Q ss_pred EEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 178 IFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 178 v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
|++.... .....+++.+.++|+|||++++.+.
T Consensus 152 V~~d~~~-----~~~~~~l~~~~~~LkpgG~lv~~~~ 183 (232)
T 3cbg_A 152 IFIDADK-----RNYPRYYEIGLNLLRRGGLMVIDNV 183 (232)
T ss_dssp EEECSCG-----GGHHHHHHHHHHTEEEEEEEEEECT
T ss_pred EEECCCH-----HHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 9976542 3446789999999999999998654
No 212
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.43 E-value=1.2e-12 Score=110.29 Aligned_cols=132 Identities=17% Similarity=0.153 Sum_probs=94.3
Q ss_pred CCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhcCC--C-CcceEEEEcccCCC--CCCCCeeEEEe
Q 024021 108 PKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSSLP--N-AKFVSFLKADFFTW--CPTELFDLIFD 180 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~--~-~~~~~~~~~d~~~~--~~~~~~D~v~~ 180 (274)
++.+|||+|||+|..+..+++. +.+++++|+++.+++.|+++++..+ . .++++++.+|..+. ...++||+|++
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 157 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 157 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEE
Confidence 4579999999999999999873 4699999999999999999886532 1 36799999998763 22578999998
Q ss_pred cccccccChhHH--HHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEE
Q 024021 181 YTFFCAIEPEMR--AAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISI 246 (274)
Q Consensus 181 ~~~~~~~~~~~~--~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 246 (274)
.......+.... ..+++.+.++|+|||++++...+.... ......+.+.+++. |..+..
T Consensus 158 d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~------~~~~~~~~~~l~~~-F~~v~~ 218 (283)
T 2i7c_A 158 DSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIH------VGTIKNMIGYAKKL-FKKVEY 218 (283)
T ss_dssp ECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCCTTTC------HHHHHHHHHHHHTT-CSEEEE
T ss_pred cCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCCcccC------HHHHHHHHHHHHHH-CCceEE
Confidence 654332222222 588999999999999999875321100 01234555666664 665544
No 213
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.43 E-value=9e-13 Score=108.79 Aligned_cols=105 Identities=17% Similarity=0.218 Sum_probs=79.8
Q ss_pred CCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcC--------CCCcceEEEEcccCCC----CCCC
Q 024021 108 PKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSL--------PNAKFVSFLKADFFTW----CPTE 173 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~--------~~~~~~~~~~~d~~~~----~~~~ 173 (274)
++.+|||+|||+|.++..+++ ++..|+|+|+++.+++.+++++... +. .++.++.+|+.+. .+.+
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~-~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGF-QNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTT-TTEEEEECCTTSCGGGTSCTT
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCC-CcEEEEeccHHHHHHHhcccc
Confidence 457999999999999999987 4568999999999999999887543 33 4799999999872 3467
Q ss_pred CeeEEEecccccccChh------HHHHHHHHHHhcccCCcEEEEEE
Q 024021 174 LFDLIFDYTFFCAIEPE------MRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 174 ~~D~v~~~~~~~~~~~~------~~~~~l~~~~~~L~pgG~~~~~~ 213 (274)
.+|.|+....-...... ....++..+.++|+|||.+++.+
T Consensus 128 ~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 128 QLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp CEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 89999854321111000 00378999999999999999865
No 214
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.43 E-value=6.5e-13 Score=113.79 Aligned_cols=133 Identities=17% Similarity=0.126 Sum_probs=94.5
Q ss_pred CCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhcC--CC-CcceEEEEcccCCC--CCCCCeeEEEe
Q 024021 108 PKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSSL--PN-AKFVSFLKADFFTW--CPTELFDLIFD 180 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~--~~-~~~~~~~~~d~~~~--~~~~~~D~v~~ 180 (274)
++.+|||+|||+|..+..+++. +.+|+++|+++.+++.|++++... +. .++++++.+|+.+. ...++||+|++
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~ 195 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 195 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEE
Confidence 4579999999999999999874 569999999999999999998652 12 35799999998763 23568999998
Q ss_pred cccccccChhHH--HHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEe
Q 024021 181 YTFFCAIEPEMR--AAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIV 247 (274)
Q Consensus 181 ~~~~~~~~~~~~--~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 247 (274)
...-..-+.... ..+++.+.++|+|||++++...+... ......++.+.+++. |..+...
T Consensus 196 d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~------~~~~~~~~~~~l~~~-F~~v~~~ 257 (321)
T 2pt6_A 196 DSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWI------HVGTIKNMIGYAKKL-FKKVEYA 257 (321)
T ss_dssp ECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTTT------CHHHHHHHHHHHHTT-CSEEEEE
T ss_pred CCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCccc------CHHHHHHHHHHHHHH-CCCeEEE
Confidence 653211111111 57899999999999999987532210 001245566666665 5555443
No 215
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.43 E-value=1.7e-13 Score=118.69 Aligned_cols=128 Identities=14% Similarity=0.143 Sum_probs=99.9
Q ss_pred CCCeEEEEcCCcchhHHHhhCC---C----CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEe
Q 024021 108 PKGRALVPGCGTGYDVVAMASP---E----RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFD 180 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~---~----~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~ 180 (274)
++.+|||+|||+|.++..+++. . .+++|+|+++.+++.|+.+....+. ++.+..+|.....+.++||+|++
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~--~~~i~~~D~l~~~~~~~fD~Ii~ 207 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ--KMTLLHQDGLANLLVDPVDVVIS 207 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC--CCEEEESCTTSCCCCCCEEEEEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC--CceEEECCCCCccccCCccEEEE
Confidence 4579999999999999888762 1 6899999999999999999876654 58999999988666678999999
Q ss_pred cccccccChhHH----------------HHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcE
Q 024021 181 YTFFCAIEPEMR----------------AAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQA 243 (274)
Q Consensus 181 ~~~~~~~~~~~~----------------~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 243 (274)
+.++++++.+.. ..++.++.+.|+|||+++++....... + -...++.+++.+.|+..
T Consensus 208 NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~--~----~~~~~ir~~l~~~~~~~ 280 (344)
T 2f8l_A 208 DLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFG--T----SDFAKVDKFIKKNGHIE 280 (344)
T ss_dssp ECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGG--S----TTHHHHHHHHHHHEEEE
T ss_pred CCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcC--C----chHHHHHHHHHhCCeEE
Confidence 999877643321 258999999999999988877432111 1 13578888888877644
No 216
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.42 E-value=8.6e-13 Score=110.70 Aligned_cols=133 Identities=14% Similarity=0.105 Sum_probs=95.3
Q ss_pred CCCeEEEEcCCcchhHHHhhCC-C-CeEEEEeCChHHHHHHHHHhhcC--CC-CcceEEEEcccCCC--CCCCCeeEEEe
Q 024021 108 PKGRALVPGCGTGYDVVAMASP-E-RYVVGLEISDIAIKKAEELSSSL--PN-AKFVSFLKADFFTW--CPTELFDLIFD 180 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~-~-~~v~~vD~~~~~~~~a~~~~~~~--~~-~~~~~~~~~d~~~~--~~~~~~D~v~~ 180 (274)
.+.+|||+|||+|..+..+++. + .+|+++|+++.+++.|+++++.. +. .++++++.+|..+. ...++||+|++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~ 154 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV 154 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEE
Confidence 4689999999999999999874 4 59999999999999999987431 12 36899999998762 23578999999
Q ss_pred cccccccChh--HHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEe
Q 024021 181 YTFFCAIEPE--MRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIV 247 (274)
Q Consensus 181 ~~~~~~~~~~--~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 247 (274)
.......+.. ....+++.+.++|+|||++++...+... ..-....+.+.+++. |..+...
T Consensus 155 d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~------~~~~~~~~~~~l~~~-F~~v~~~ 216 (275)
T 1iy9_A 155 DSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWF------TPELITNVQRDVKEI-FPITKLY 216 (275)
T ss_dssp SCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTT------CHHHHHHHHHHHHTT-CSEEEEE
T ss_pred CCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCccc------cHHHHHHHHHHHHHh-CCCeEEE
Confidence 6554322111 1246889999999999999887522110 011245666777776 6665543
No 217
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.42 E-value=2.5e-13 Score=110.67 Aligned_cols=102 Identities=18% Similarity=0.202 Sum_probs=83.4
Q ss_pred CCCCCeEEEEcCCcchhHHHhhC-CC-------CeEEEEeCChHHHHHHHHHhhcCCC----CcceEEEEcccCCCCCC-
Q 024021 106 ALPKGRALVPGCGTGYDVVAMAS-PE-------RYVVGLEISDIAIKKAEELSSSLPN----AKFVSFLKADFFTWCPT- 172 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~-~~-------~~v~~vD~~~~~~~~a~~~~~~~~~----~~~~~~~~~d~~~~~~~- 172 (274)
..++.+|||+|||+|..+..+++ .+ .+|+++|+++.+++.|+++....+. ..++++..+|..+..+.
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 161 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPN 161 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGGG
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCcC
Confidence 34567999999999999998887 23 5999999999999999998765321 14699999999874443
Q ss_pred CCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEcc
Q 024021 173 ELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFP 215 (274)
Q Consensus 173 ~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 215 (274)
++||+|++...+++++ +.+.+.|+|||++++....
T Consensus 162 ~~fD~I~~~~~~~~~~--------~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 162 APYNAIHVGAAAPDTP--------TELINQLASGGRLIVPVGP 196 (227)
T ss_dssp CSEEEEEECSCBSSCC--------HHHHHTEEEEEEEEEEESC
T ss_pred CCccEEEECCchHHHH--------HHHHHHhcCCCEEEEEEec
Confidence 6899999999988774 5688999999999998753
No 218
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.42 E-value=2e-12 Score=113.49 Aligned_cols=140 Identities=11% Similarity=0.002 Sum_probs=100.1
Q ss_pred HHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC--CCCCe
Q 024021 98 IVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC--PTELF 175 (274)
Q Consensus 98 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~ 175 (274)
...++.....++.+|||+|||+|.++..++..|+.|+++|+|+.+++.|++++..++.. ..+..+|+.+.. ..+.|
T Consensus 204 ~r~~l~~~~~~g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n~~~ng~~--~~~~~~D~~~~l~~~~~~f 281 (393)
T 4dmg_A 204 NRRLFEAMVRPGERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQAALRLGLR--VDIRHGEALPTLRGLEGPF 281 (393)
T ss_dssp HHHHHHTTCCTTCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCC--CEEEESCHHHHHHTCCCCE
T ss_pred HHHHHHHHhcCCCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHhCCC--CcEEEccHHHHHHHhcCCC
Confidence 34444444445789999999999999999998888999999999999999999887764 356689988732 13349
Q ss_pred eEEEecccccccCh-------hHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCH----HHHHHHHhcCCCcEE
Q 024021 176 DLIFDYTFFCAIEP-------EMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSV----SDYEEVLQPMGFQAI 244 (274)
Q Consensus 176 D~v~~~~~~~~~~~-------~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~Gf~~~ 244 (274)
|+|++......-.. .....++..+.++|+|||.+++...... .+. +.+.+.+..+|....
T Consensus 282 D~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~---------~~~~~f~~~v~~a~~~~g~~~~ 352 (393)
T 4dmg_A 282 HHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYH---------LRLEDLLEVARRAAADLGRRLR 352 (393)
T ss_dssp EEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT---------SCHHHHHHHHHHHHHHHTCCEE
T ss_pred CEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC---------CCHHHHHHHHHHHHHHhCCeEE
Confidence 99998765422111 2345788999999999999997765432 133 344455566676655
Q ss_pred EEee
Q 024021 245 SIVD 248 (274)
Q Consensus 245 ~~~~ 248 (274)
.+..
T Consensus 353 i~~~ 356 (393)
T 4dmg_A 353 VHRV 356 (393)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4433
No 219
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.42 E-value=8.5e-13 Score=115.92 Aligned_cols=141 Identities=21% Similarity=0.031 Sum_probs=102.7
Q ss_pred HHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-----CC
Q 024021 99 VHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP-----TE 173 (274)
Q Consensus 99 ~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-----~~ 173 (274)
..++... ++.+|||+|||+|.++..++..+.+|+++|+++.+++.|++++..++..+ ++++.+|+.+..+ .+
T Consensus 202 ~~~~~~~--~~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n~~~n~~~~-~~~~~~d~~~~~~~~~~~~~ 278 (382)
T 1wxx_A 202 RLYMERF--RGERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARLNGLGN-VRVLEANAFDLLRRLEKEGE 278 (382)
T ss_dssp HHHGGGC--CEEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHHHHTTCTT-EEEEESCHHHHHHHHHHTTC
T ss_pred HHHHHhc--CCCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCC-ceEEECCHHHHHHHHHhcCC
Confidence 3344443 56799999999999999998776699999999999999999998887654 9999999987432 56
Q ss_pred CeeEEEecccccccCh-------hHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEE
Q 024021 174 LFDLIFDYTFFCAIEP-------EMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISI 246 (274)
Q Consensus 174 ~~D~v~~~~~~~~~~~-------~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 246 (274)
+||+|++.......+. .....++..+.++|+|||.+++.+.+.... ...-.+.+.+.+..+|.....+
T Consensus 279 ~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-----~~~~~~~i~~~~~~~g~~~~~i 353 (382)
T 1wxx_A 279 RFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMT-----EPLFYAMVAEAAQDAHRLLRVV 353 (382)
T ss_dssp CEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSC-----HHHHHHHHHHHHHHTTCCEEEE
T ss_pred CeeEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCC-----HHHHHHHHHHHHHHcCCeEEEE
Confidence 8999998765432221 334678899999999999999987544211 0001234455677777655444
Q ss_pred e
Q 024021 247 V 247 (274)
Q Consensus 247 ~ 247 (274)
.
T Consensus 354 ~ 354 (382)
T 1wxx_A 354 E 354 (382)
T ss_dssp E
T ss_pred E
Confidence 3
No 220
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.42 E-value=6.1e-13 Score=103.44 Aligned_cols=118 Identities=13% Similarity=0.159 Sum_probs=91.3
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC---CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC---------CCCCC
Q 024021 107 LPKGRALVPGCGTGYDVVAMASP---ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW---------CPTEL 174 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~---------~~~~~ 174 (274)
.++.+|||+|||+|.++..+++. +.+++++|+++ ++.. .++++..+|+.+. .+.++
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-----------~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-----------VGVDFLQGDFRDELVMKALLERVGDSK 88 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-----------TTEEEEESCTTSHHHHHHHHHHHTTCC
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-----------CcEEEEEcccccchhhhhhhccCCCCc
Confidence 45679999999999999988773 57999999998 6422 4689999999874 55678
Q ss_pred eeEEEecccccccChh---H------HHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEE
Q 024021 175 FDLIFDYTFFCAIEPE---M------RAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAIS 245 (274)
Q Consensus 175 ~D~v~~~~~~~~~~~~---~------~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 245 (274)
||+|+++.++++.... . ...+++.+.++|+|||.+++..+... ...++.+.++.. |..+.
T Consensus 89 ~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~----------~~~~~~~~~~~~-~~~~~ 157 (180)
T 1ej0_A 89 VQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGE----------GFDEYLREIRSL-FTKVK 157 (180)
T ss_dssp EEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESST----------THHHHHHHHHHH-EEEEE
T ss_pred eeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCC----------cHHHHHHHHHHh-hhhEE
Confidence 9999998887765322 1 15789999999999999998775442 456777777774 77666
Q ss_pred Ee
Q 024021 246 IV 247 (274)
Q Consensus 246 ~~ 247 (274)
+.
T Consensus 158 ~~ 159 (180)
T 1ej0_A 158 VR 159 (180)
T ss_dssp EE
T ss_pred ee
Confidence 54
No 221
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.41 E-value=4.5e-13 Score=125.94 Aligned_cols=134 Identities=19% Similarity=0.189 Sum_probs=103.0
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCC-cceEEEEcccCCC--CCCCCeeEEEecc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNA-KFVSFLKADFFTW--CPTELFDLIFDYT 182 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~-~~~~~~~~d~~~~--~~~~~~D~v~~~~ 182 (274)
.++.+|||+|||+|.++..++..|+ +|+++|+|+.+++.|++++..+++. ++++++.+|+.+. ...++||+|++..
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DP 617 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDP 617 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECC
T ss_pred cCCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECC
Confidence 3578999999999999999988777 6999999999999999999988876 5899999999873 2346899999976
Q ss_pred cccc--------cC-hhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeeccc
Q 024021 183 FFCA--------IE-PEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDNKL 251 (274)
Q Consensus 183 ~~~~--------~~-~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 251 (274)
.... +. ......++..+.++|+|||++++.+.... +... .+.++..||+...+.....
T Consensus 618 P~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~-------~~~~----~~~l~~~g~~~~~i~~~~l 684 (703)
T 3v97_A 618 PTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRG-------FRMD----LDGLAKLGLKAQEITQKTL 684 (703)
T ss_dssp CSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTT-------CCCC----HHHHHHTTEEEEECTTTTC
T ss_pred ccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcc-------cccC----HHHHHHcCCceeeeeeccC
Confidence 5321 11 13456788999999999999998774321 1112 4567788988666655443
No 222
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.41 E-value=3.1e-12 Score=114.11 Aligned_cols=142 Identities=18% Similarity=0.176 Sum_probs=104.3
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC-----CCCCeeEEEec
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC-----PTELFDLIFDY 181 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~~~~D~v~~~ 181 (274)
.++.+|||+|||+|.++..+++.+.+|+|+|+++.+++.|+++...++.. +++|+.+|+.+.. ..++||+|+++
T Consensus 285 ~~~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~n~~~~~~~-~v~f~~~d~~~~l~~~~~~~~~fD~Vv~d 363 (433)
T 1uwv_A 285 QPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQ-NVTFYHENLEEDVTKQPWAKNGFDKVLLD 363 (433)
T ss_dssp CTTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCTTSCCSSSGGGTTCCSEEEEC
T ss_pred CCCCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEECCHHHHhhhhhhhcCCCCEEEEC
Confidence 34579999999999999999998889999999999999999999877664 7999999998732 23579999987
Q ss_pred ccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEeecccccCCccchhH
Q 024021 182 TFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVDNKLAIGPRKGREK 261 (274)
Q Consensus 182 ~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~~ 261 (274)
....... .+++.+.+ ++|++++++.+.+. +...-...+.+.||.+..+...+. ++.-...|.
T Consensus 364 PPr~g~~-----~~~~~l~~-~~p~~ivyvsc~p~-----------tlard~~~l~~~Gy~~~~~~~~d~-Fp~t~HvE~ 425 (433)
T 1uwv_A 364 PARAGAA-----GVMQQIIK-LEPIRIVYVSCNPA-----------TLARDSEALLKAGYTIARLAMLDM-FPHTGHLES 425 (433)
T ss_dssp CCTTCCH-----HHHHHHHH-HCCSEEEEEESCHH-----------HHHHHHHHHHHTTCEEEEEEEECC-STTSSCCEE
T ss_pred CCCccHH-----HHHHHHHh-cCCCeEEEEECChH-----------HHHhhHHHHHHCCcEEEEEEEecc-CCCCCeEEE
Confidence 7665441 34455544 78999888876222 333445667778999988766432 333334565
Q ss_pred HHHhhh
Q 024021 262 LGRWKR 267 (274)
Q Consensus 262 ~~~~~~ 267 (274)
+.++.|
T Consensus 426 v~ll~r 431 (433)
T 1uwv_A 426 MVLFSR 431 (433)
T ss_dssp EEEEEC
T ss_pred EEEEEE
Confidence 555543
No 223
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.40 E-value=7.9e-13 Score=111.31 Aligned_cols=106 Identities=20% Similarity=0.184 Sum_probs=81.4
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC-CCeEEEEeCChHHHHHHHHHhhcC--C--------CCcceEEEEcccCCCCC-CCC
Q 024021 107 LPKGRALVPGCGTGYDVVAMASP-ERYVVGLEISDIAIKKAEELSSSL--P--------NAKFVSFLKADFFTWCP-TEL 174 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~--~--------~~~~~~~~~~d~~~~~~-~~~ 174 (274)
..+.+|||+|||+|..+..+++. ..+++++|+++.+++.|++++ .. + ..++++++.+|..+... .++
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~ 152 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRG 152 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcccCC
Confidence 34579999999999999999875 459999999999999999988 32 2 13679999999866211 578
Q ss_pred eeEEEecccccccChhH--HHHHHHHHHhcccCCcEEEEEE
Q 024021 175 FDLIFDYTFFCAIEPEM--RAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 175 ~D~v~~~~~~~~~~~~~--~~~~l~~~~~~L~pgG~~~~~~ 213 (274)
||+|++......-+... ...+++.+.++|+|||++++..
T Consensus 153 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 153 FDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp EEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 99999866532211122 2578999999999999998865
No 224
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.40 E-value=3.4e-12 Score=101.76 Aligned_cols=117 Identities=15% Similarity=0.190 Sum_probs=85.8
Q ss_pred CCCCeEEEEcCCcchhHHHhhC--C--CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC------------
Q 024021 107 LPKGRALVPGCGTGYDVVAMAS--P--ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC------------ 170 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~--~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~------------ 170 (274)
.++.+|||+|||+|.++..+++ + +.+|+|+|+++.+ . ..+++++.+|+.+..
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~---------~---~~~v~~~~~d~~~~~~~~~~~~~~i~~ 88 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD---------P---IPNVYFIQGEIGKDNMNNIKNINYIDN 88 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC---------C---CTTCEEEECCTTTTSSCCC--------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC---------C---CCCceEEEccccchhhhhhcccccccc
Confidence 3557999999999999999987 2 5799999999831 1 146899999998743
Q ss_pred --------------CCCCeeEEEecccccccC---hhH------HHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCccc
Q 024021 171 --------------PTELFDLIFDYTFFCAIE---PEM------RAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKV 227 (274)
Q Consensus 171 --------------~~~~~D~v~~~~~~~~~~---~~~------~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~ 227 (274)
+.++||+|++...+++.. .+. ...++..+.++|+|||.+++..+...
T Consensus 89 ~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~---------- 158 (201)
T 2plw_A 89 MNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGS---------- 158 (201)
T ss_dssp ---CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECST----------
T ss_pred ccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCC----------
Confidence 456899999987766531 111 12478899999999999998665331
Q ss_pred CHHHHHHHHhcCCCcEEEE
Q 024021 228 SVSDYEEVLQPMGFQAISI 246 (274)
Q Consensus 228 ~~~~~~~~l~~~Gf~~~~~ 246 (274)
...++.+.++. .|..+.+
T Consensus 159 ~~~~l~~~l~~-~f~~v~~ 176 (201)
T 2plw_A 159 QTNNLKTYLKG-MFQLVHT 176 (201)
T ss_dssp THHHHHHHHHT-TEEEEEE
T ss_pred CHHHHHHHHHH-HHheEEE
Confidence 45677777776 4665554
No 225
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.40 E-value=4.2e-12 Score=100.76 Aligned_cols=119 Identities=13% Similarity=0.208 Sum_probs=88.2
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC--------C----CC
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP--------T----EL 174 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~--------~----~~ 174 (274)
.++.+|||+|||+|.++..+++.+.+|+|+|+++.. . ..+++++++|+.+... . ++
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~---------~---~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEME---------E---IAGVRFIRCDIFKETIFDDIDRALREEGIEK 91 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCC---------C---CTTCEEEECCTTSSSHHHHHHHHHHHHTCSS
T ss_pred CCCCEEEEEeecCCHHHHHHHHcCCcEEEEeccccc---------c---CCCeEEEEccccCHHHHHHHHHHhhcccCCc
Confidence 456899999999999999999988899999999741 1 1469999999987321 1 48
Q ss_pred eeEEEecccccccC---h------hHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEE
Q 024021 175 FDLIFDYTFFCAIE---P------EMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAIS 245 (274)
Q Consensus 175 ~D~v~~~~~~~~~~---~------~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 245 (274)
||+|++........ . .....+++.+.++|+|||.+++..+... ...++.+.++. .|..+.
T Consensus 92 ~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~----------~~~~~~~~l~~-~F~~v~ 160 (191)
T 3dou_A 92 VDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGD----------MTNDFIAIWRK-NFSSYK 160 (191)
T ss_dssp EEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECST----------HHHHHHHHHGG-GEEEEE
T ss_pred ceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCC----------CHHHHHHHHHH-hcCEEE
Confidence 99999976433211 0 1235678889999999999998776442 34677777866 477766
Q ss_pred Eee
Q 024021 246 IVD 248 (274)
Q Consensus 246 ~~~ 248 (274)
+..
T Consensus 161 ~~k 163 (191)
T 3dou_A 161 ISK 163 (191)
T ss_dssp EEC
T ss_pred EEC
Confidence 544
No 226
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.40 E-value=1.8e-12 Score=111.91 Aligned_cols=103 Identities=16% Similarity=0.086 Sum_probs=79.1
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCC-C--CeEEEEeCChHHHHHHHHHhhcC-------C---CCcceEEEEcccCCC---
Q 024021 106 ALPKGRALVPGCGTGYDVVAMASP-E--RYVVGLEISDIAIKKAEELSSSL-------P---NAKFVSFLKADFFTW--- 169 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~-~--~~v~~vD~~~~~~~~a~~~~~~~-------~---~~~~~~~~~~d~~~~--- 169 (274)
..++.+|||+|||+|.++..+++. | .+|+++|+++.+++.|+++.... + ...++++..+|+.+.
T Consensus 103 ~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~ 182 (336)
T 2b25_A 103 INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATED 182 (336)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC--
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccc
Confidence 456689999999999999998873 3 79999999999999999988642 1 225799999999874
Q ss_pred CCCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEcc
Q 024021 170 CPTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFP 215 (274)
Q Consensus 170 ~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 215 (274)
.+.++||+|++...-. ..++..+.++|+|||.+++....
T Consensus 183 ~~~~~fD~V~~~~~~~-------~~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 183 IKSLTFDAVALDMLNP-------HVTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp -----EEEEEECSSST-------TTTHHHHGGGEEEEEEEEEEESS
T ss_pred cCCCCeeEEEECCCCH-------HHHHHHHHHhcCCCcEEEEEeCC
Confidence 2346799999854321 13678999999999999987643
No 227
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.40 E-value=1.9e-12 Score=110.69 Aligned_cols=133 Identities=13% Similarity=0.077 Sum_probs=95.5
Q ss_pred CCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhc--CC-C-CcceEEEEcccCCC--CCCCCeeEEE
Q 024021 108 PKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSS--LP-N-AKFVSFLKADFFTW--CPTELFDLIF 179 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~--~~-~-~~~~~~~~~d~~~~--~~~~~~D~v~ 179 (274)
.+.+|||+|||+|..+..+++. +.+++++|+++.+++.|++++.. .+ . .++++++.+|+.+. ...++||+|+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVI 156 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEE
Confidence 4579999999999999999874 56999999999999999998754 11 1 36799999999773 2357899999
Q ss_pred ecccccc---cChhH--HHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEE
Q 024021 180 DYTFFCA---IEPEM--RAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISI 246 (274)
Q Consensus 180 ~~~~~~~---~~~~~--~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 246 (274)
+....+. -+... ...+++.+.++|+|||++++........ . .-....+.+.+++. |..+..
T Consensus 157 ~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~--~---~~~~~~~~~~l~~~-F~~v~~ 222 (314)
T 1uir_A 157 IDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLT--H---HRVHPVVHRTVREA-FRYVRS 222 (314)
T ss_dssp EECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC--------CHHHHHHHHHHTT-CSEEEE
T ss_pred ECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCcccc--C---HHHHHHHHHHHHHH-CCceEE
Confidence 9765543 11111 3678999999999999999865332100 0 01345666777765 554443
No 228
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.39 E-value=1.3e-12 Score=110.92 Aligned_cols=104 Identities=18% Similarity=0.080 Sum_probs=83.4
Q ss_pred CeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC---CCCCCeeEEEecccc
Q 024021 110 GRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW---CPTELFDLIFDYTFF 184 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~D~v~~~~~~ 184 (274)
.+|||||||+|..+..+++ ++.+++++|+++.+++.|++++... ..++++++.+|..+. .+.++||+|++....
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~-~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~ 169 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIP-RAPRVKIRVDDARMVAESFTPASRDVIIRDVFA 169 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCC-CTTTEEEEESCHHHHHHTCCTTCEEEEEECCST
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhcccc-CCCceEEEECcHHHHHhhccCCCCCEEEECCCC
Confidence 4999999999999999987 6779999999999999999998653 236899999999873 235789999986443
Q ss_pred cccChhH--HHHHHHHHHhcccCCcEEEEEEc
Q 024021 185 CAIEPEM--RAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 185 ~~~~~~~--~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
....+.. ...+++.+.++|+|||++++...
T Consensus 170 ~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 170 GAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp TSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 3211111 25789999999999999988764
No 229
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.39 E-value=9.2e-13 Score=112.41 Aligned_cols=106 Identities=21% Similarity=0.196 Sum_probs=80.3
Q ss_pred CCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhcC--CC-CcceEEEEcccCCC--CCCCCeeEEEe
Q 024021 108 PKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSSL--PN-AKFVSFLKADFFTW--CPTELFDLIFD 180 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~--~~-~~~~~~~~~d~~~~--~~~~~~D~v~~ 180 (274)
.+.+|||+|||+|..+..+++. ..+|+++|+++.+++.|+++++.. +. .++++++.+|+.+. ...++||+|++
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 187 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIIT 187 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEE
Confidence 4579999999999999999873 569999999999999999998653 22 36899999998763 24578999998
Q ss_pred cccccccChhHH--HHHHHHHHhcccCCcEEEEEE
Q 024021 181 YTFFCAIEPEMR--AAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 181 ~~~~~~~~~~~~--~~~l~~~~~~L~pgG~~~~~~ 213 (274)
...-..-+.... ..+++.+.++|+|||++++..
T Consensus 188 d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 188 DSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp CCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred cCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 654221111111 688999999999999999865
No 230
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.39 E-value=1.5e-12 Score=110.35 Aligned_cols=132 Identities=14% Similarity=0.025 Sum_probs=91.1
Q ss_pred CCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhc--CCC-CcceEEEEcccCCC--CCCCCeeEEEe
Q 024021 108 PKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSS--LPN-AKFVSFLKADFFTW--CPTELFDLIFD 180 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~--~~~-~~~~~~~~~d~~~~--~~~~~~D~v~~ 180 (274)
.+.+|||+|||+|..+..+++. ..+|+++|+++.+++.|++++.. .+. .++++++.+|+.+. ...++||+|++
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 4579999999999999999874 46999999999999999998753 112 35799999998762 23568999998
Q ss_pred cccccccCh-h--HHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEE
Q 024021 181 YTFFCAIEP-E--MRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISI 246 (274)
Q Consensus 181 ~~~~~~~~~-~--~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 246 (274)
...-....+ . ....+++.+.++|+|||++++...+... .......+.+.+++. |..+..
T Consensus 170 d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~------~~~~~~~~~~~l~~~-F~~v~~ 231 (296)
T 1inl_A 170 DSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPFY------DIGWFKLAYRRISKV-FPITRV 231 (296)
T ss_dssp EC----------CCSHHHHHHHHHHEEEEEEEEEECCCTTT------THHHHHHHHHHHHHH-CSEEEE
T ss_pred cCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCccc------CHHHHHHHHHHHHHH-CCceEE
Confidence 543220111 1 1257889999999999999986522110 011234556666665 555554
No 231
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.38 E-value=1.4e-12 Score=110.94 Aligned_cols=107 Identities=21% Similarity=0.213 Sum_probs=81.2
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhc--CCC-CcceEEEEcccCCC--CCCCCeeEEE
Q 024021 107 LPKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSS--LPN-AKFVSFLKADFFTW--CPTELFDLIF 179 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~--~~~-~~~~~~~~~d~~~~--~~~~~~D~v~ 179 (274)
..+.+|||+|||+|..+..+++. ..+++++|+++.+++.|++++.. .+. .++++++.+|..+. ...++||+|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 34579999999999999999874 46999999999999999998754 222 36799999998762 2357899999
Q ss_pred ecccccccChh--HHHHHHHHHHhcccCCcEEEEEE
Q 024021 180 DYTFFCAIEPE--MRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 180 ~~~~~~~~~~~--~~~~~l~~~~~~L~pgG~~~~~~ 213 (274)
+.......+.. ....+++.+.++|+|||++++..
T Consensus 174 ~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 174 TDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 86543221111 23568999999999999999865
No 232
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.38 E-value=1.6e-12 Score=111.72 Aligned_cols=107 Identities=15% Similarity=0.149 Sum_probs=82.7
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhcC--CC-CcceEEEEcccCCC---CCCCCeeEE
Q 024021 107 LPKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSSL--PN-AKFVSFLKADFFTW---CPTELFDLI 178 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~--~~-~~~~~~~~~d~~~~---~~~~~~D~v 178 (274)
..+.+|||+|||+|..+..+++. +.+|+++|+++.+++.|++++... ++ .++++++.+|+.+. .+.++||+|
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 34579999999999999999874 569999999999999999987541 22 25799999998763 235689999
Q ss_pred EecccccccChh--HHHHHHHHHHhcccCCcEEEEEE
Q 024021 179 FDYTFFCAIEPE--MRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 179 ~~~~~~~~~~~~--~~~~~l~~~~~~L~pgG~~~~~~ 213 (274)
++...-..-+.. ....+++.+.++|+|||++++..
T Consensus 199 i~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 199 IVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp EECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 986542111111 13678999999999999999864
No 233
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.37 E-value=1.7e-12 Score=109.49 Aligned_cols=112 Identities=20% Similarity=0.188 Sum_probs=83.2
Q ss_pred HHHHHHhcCC-CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCe
Q 024021 97 IIVHLHQSGA-LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELF 175 (274)
Q Consensus 97 ~~~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 175 (274)
.+..++.... .++.+|||+|||+|.++..+++.+.+|+++|+++.+++.++++....+..++++++.+|+.+... ..|
T Consensus 16 i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~-~~f 94 (285)
T 1zq9_A 16 IINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDL-PFF 94 (285)
T ss_dssp HHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCC-CCC
T ss_pred HHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccc-hhh
Confidence 3444444443 35579999999999999999988889999999999999999998766544689999999987433 379
Q ss_pred eEEEecccccccChhHHHHHHH--------------HH--HhcccCCcEEE
Q 024021 176 DLIFDYTFFCAIEPEMRAAWAQ--------------KI--KDFLKPDGELI 210 (274)
Q Consensus 176 D~v~~~~~~~~~~~~~~~~~l~--------------~~--~~~L~pgG~~~ 210 (274)
|+|+++.+++..+ +....+++ ++ +.+++|||.++
T Consensus 95 D~vv~nlpy~~~~-~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 95 DTCVANLPYQISS-PFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp SEEEEECCGGGHH-HHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred cEEEEecCcccch-HHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 9999987766432 22223332 11 35889999764
No 234
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.35 E-value=2e-11 Score=108.28 Aligned_cols=99 Identities=15% Similarity=0.043 Sum_probs=81.5
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFCA 186 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~ 186 (274)
.++.+|||+|||+|.++..+++.+.+|+|+|+++.+++.|+++...++.. ++|+.+|+.+..+. +||+|++......
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~n~~~ngl~--v~~~~~d~~~~~~~-~fD~Vv~dPPr~g 365 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEINNVD--AEFEVASDREVSVK-GFDTVIVDPPRAG 365 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCC--EEEEECCTTTCCCT-TCSEEEECCCTTC
T ss_pred CCCCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChHHcCcc-CCCEEEEcCCccc
Confidence 45679999999999999999988889999999999999999999877653 99999999986544 8999998776544
Q ss_pred cChhHHHHHHHHHHhcccCCcEEEEEE
Q 024021 187 IEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 187 ~~~~~~~~~l~~~~~~L~pgG~~~~~~ 213 (274)
+. ..+++.+. .|+|+|++++.+
T Consensus 366 ~~----~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 366 LH----PRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp SC----HHHHHHHH-HHCCSEEEEEES
T ss_pred hH----HHHHHHHH-hcCCCcEEEEEC
Confidence 43 23445554 489999999876
No 235
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.35 E-value=5.4e-13 Score=109.45 Aligned_cols=120 Identities=12% Similarity=0.019 Sum_probs=89.2
Q ss_pred CCCeEEEEcCCcchhHHHhhCC------CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC---C-CC-CCee
Q 024021 108 PKGRALVPGCGTGYDVVAMASP------ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW---C-PT-ELFD 176 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~---~-~~-~~~D 176 (274)
++.+|||||||+|..+..+++. +.+|+++|+++.+++.|+. ..++++++.+|+.+. . .. .+||
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~------~~~~v~~~~gD~~~~~~l~~~~~~~fD 154 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS------DMENITLHQGDCSDLTTFEHLREMAHP 154 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG------GCTTEEEEECCSSCSGGGGGGSSSCSS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc------cCCceEEEECcchhHHHHHhhccCCCC
Confidence 4579999999999999988763 6799999999999888872 125799999999873 1 22 3799
Q ss_pred EEEecccccccChhHHHHHHHHHHh-cccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcC--CCcEE
Q 024021 177 LIFDYTFFCAIEPEMRAAWAQKIKD-FLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPM--GFQAI 244 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~~~~-~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--Gf~~~ 244 (274)
+|++... +. ....++..+.+ +|+|||++++.+.... ......+.+.++++.+ +|.+.
T Consensus 155 ~I~~d~~--~~---~~~~~l~~~~r~~LkpGG~lv~~d~~~~------~~~~~~~~~~~~l~~~~~~f~~~ 214 (236)
T 2bm8_A 155 LIFIDNA--HA---NTFNIMKWAVDHLLEEGDYFIIEDMIPY------WYRYAPQLFSEYLGAFRDVLSMD 214 (236)
T ss_dssp EEEEESS--CS---SHHHHHHHHHHHTCCTTCEEEECSCHHH------HHHHCHHHHHHHHHTTTTTEEEE
T ss_pred EEEECCc--hH---hHHHHHHHHHHhhCCCCCEEEEEeCccc------ccccCHHHHHHHHHhCcccEEEc
Confidence 9997654 22 33568899997 9999999999653110 0012456888888888 56654
No 236
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.34 E-value=1.4e-11 Score=110.30 Aligned_cols=134 Identities=13% Similarity=0.136 Sum_probs=100.5
Q ss_pred CCCCCeEEEEcCCcchhHHHhhC--CC-CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC---CCCCeeEEE
Q 024021 106 ALPKGRALVPGCGTGYDVVAMAS--PE-RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC---PTELFDLIF 179 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~--~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~D~v~ 179 (274)
..++.+|||+|||+|..+..+++ .+ .+|+++|+++.+++.++++....+. .+++++.+|+.+.. +.++||+|+
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~-~~v~~~~~D~~~~~~~~~~~~fD~Vl 335 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGI-KIVKPLVKDARKAPEIIGEEVADKVL 335 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCTTCCSSSSCSSCEEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC-CcEEEEEcChhhcchhhccCCCCEEE
Confidence 45567999999999999999887 44 6999999999999999999987765 36999999998743 236799999
Q ss_pred ecc------cccccChhH--------------HHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcC
Q 024021 180 DYT------FFCAIEPEM--------------RAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPM 239 (274)
Q Consensus 180 ~~~------~~~~~~~~~--------------~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 239 (274)
+.. ++...++.. ...+++.+.++|+|||.+++.+.+... .-..+.+..+++.+
T Consensus 336 ~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~-------~ene~~v~~~l~~~ 408 (450)
T 2yxl_A 336 LDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFK-------EENEKNIRWFLNVH 408 (450)
T ss_dssp EECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCG-------GGTHHHHHHHHHHC
T ss_pred EcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCCh-------hhHHHHHHHHHHhC
Confidence 732 232222111 157899999999999999988765421 11355677788887
Q ss_pred -CCcEEEEe
Q 024021 240 -GFQAISIV 247 (274)
Q Consensus 240 -Gf~~~~~~ 247 (274)
||..+.+.
T Consensus 409 ~~~~~~~~~ 417 (450)
T 2yxl_A 409 PEFKLVPLK 417 (450)
T ss_dssp SSCEECCCC
T ss_pred CCCEEeecc
Confidence 68876543
No 237
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.33 E-value=5.4e-12 Score=112.63 Aligned_cols=142 Identities=13% Similarity=0.101 Sum_probs=103.7
Q ss_pred cHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhC---CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC-
Q 024021 95 APIIVHLHQSGALPKGRALVPGCGTGYDVVAMAS---PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC- 170 (274)
Q Consensus 95 ~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~- 170 (274)
...+..++. ..++.+|||+|||+|..+..+++ ....|+++|+++.+++.+++++...+.. +.++.+|..+..
T Consensus 90 s~l~a~~L~--~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~--v~~~~~Da~~l~~ 165 (464)
T 3m6w_A 90 AQAVGVLLD--PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP--LAVTQAPPRALAE 165 (464)
T ss_dssp THHHHHHHC--CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC--CEEECSCHHHHHH
T ss_pred HHHHHHhcC--cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe--EEEEECCHHHhhh
Confidence 334444444 45678999999999999998886 2369999999999999999999887764 899999987632
Q ss_pred -CCCCeeEEEecccc------cccC-------hh-------HHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCH
Q 024021 171 -PTELFDLIFDYTFF------CAIE-------PE-------MRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSV 229 (274)
Q Consensus 171 -~~~~~D~v~~~~~~------~~~~-------~~-------~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~ 229 (274)
..++||+|++.... ..-+ ++ ....+++.+.++|+|||+++..+.+... .-+.
T Consensus 166 ~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~-------eEne 238 (464)
T 3m6w_A 166 AFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAP-------EENE 238 (464)
T ss_dssp HHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCG-------GGTH
T ss_pred hccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCch-------hcCH
Confidence 35789999964332 1111 11 1267899999999999999987754421 1246
Q ss_pred HHHHHHHhcC-CCcEEEEe
Q 024021 230 SDYEEVLQPM-GFQAISIV 247 (274)
Q Consensus 230 ~~~~~~l~~~-Gf~~~~~~ 247 (274)
+.+..+++.+ +|+++.+.
T Consensus 239 ~vv~~~l~~~~~~~l~~~~ 257 (464)
T 3m6w_A 239 GVVAHFLKAHPEFRLEDAR 257 (464)
T ss_dssp HHHHHHHHHCTTEEEECCC
T ss_pred HHHHHHHHHCCCcEEEecc
Confidence 6777778877 58776654
No 238
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.32 E-value=3.7e-12 Score=110.56 Aligned_cols=108 Identities=17% Similarity=0.109 Sum_probs=82.5
Q ss_pred cHHHHHHHhcCCCCCCeEEEEcCC------cchhHHHhhC---CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcc
Q 024021 95 APIIVHLHQSGALPKGRALVPGCG------TGYDVVAMAS---PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKAD 165 (274)
Q Consensus 95 ~~~~~~~~~~~~~~~~~vLDiG~G------~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d 165 (274)
......++.....++.+||||||| +|..+..+++ ++.+|+|+|+++.+. . ..++++|+++|
T Consensus 203 ~~~Ye~lL~~l~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~------~----~~~rI~fv~GD 272 (419)
T 3sso_A 203 TPHYDRHFRDYRNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH------V----DELRIRTIQGD 272 (419)
T ss_dssp HHHHHHHHGGGTTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG------G----CBTTEEEEECC
T ss_pred HHHHHHHHHhhcCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh------h----cCCCcEEEEec
Confidence 455666666555567899999999 7766666654 578999999999872 1 12579999999
Q ss_pred cCCC-CC------CCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEcc
Q 024021 166 FFTW-CP------TELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFP 215 (274)
Q Consensus 166 ~~~~-~~------~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 215 (274)
+.+. .. .++||+|++... +++ .+...+++++.++|||||++++.+..
T Consensus 273 a~dlpf~~~l~~~d~sFDlVisdgs-H~~--~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 273 QNDAEFLDRIARRYGPFDIVIDDGS-HIN--AHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp TTCHHHHHHHHHHHCCEEEEEECSC-CCH--HHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred ccccchhhhhhcccCCccEEEECCc-ccc--hhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 9883 22 478999998754 333 45678899999999999999998765
No 239
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.31 E-value=7.1e-12 Score=111.70 Aligned_cols=143 Identities=15% Similarity=0.044 Sum_probs=105.6
Q ss_pred cHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhC---CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC-
Q 024021 95 APIIVHLHQSGALPKGRALVPGCGTGYDVVAMAS---PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC- 170 (274)
Q Consensus 95 ~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~- 170 (274)
...+..++. ..++.+|||+|||+|..+..++. ....|+++|+++.+++.+++++...+.. ++.++.+|.....
T Consensus 94 s~l~~~~L~--~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~-nv~v~~~Da~~l~~ 170 (456)
T 3m4x_A 94 AMIVGTAAA--AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVS-NAIVTNHAPAELVP 170 (456)
T ss_dssp THHHHHHHC--CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCS-SEEEECCCHHHHHH
T ss_pred HHHHHHHcC--CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEeCCHHHhhh
Confidence 334444444 45678999999999999998876 3469999999999999999999887764 6999999987632
Q ss_pred -CCCCeeEEEecccc---ccc--Chh---------------HHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCH
Q 024021 171 -PTELFDLIFDYTFF---CAI--EPE---------------MRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSV 229 (274)
Q Consensus 171 -~~~~~D~v~~~~~~---~~~--~~~---------------~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~ 229 (274)
..+.||+|++.... ..+ +++ ....+++.+.++|+|||+++..+.+... .-+.
T Consensus 171 ~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~-------eEne 243 (456)
T 3m4x_A 171 HFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAP-------EENE 243 (456)
T ss_dssp HHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCG-------GGTH
T ss_pred hccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeeccc-------ccCH
Confidence 35789999986442 111 111 1237899999999999999987754421 1256
Q ss_pred HHHHHHHhcCCCcEEEEe
Q 024021 230 SDYEEVLQPMGFQAISIV 247 (274)
Q Consensus 230 ~~~~~~l~~~Gf~~~~~~ 247 (274)
+.+..+++.+||+++.+.
T Consensus 244 ~vv~~~l~~~~~~l~~~~ 261 (456)
T 3m4x_A 244 EIISWLVENYPVTIEEIP 261 (456)
T ss_dssp HHHHHHHHHSSEEEECCC
T ss_pred HHHHHHHHhCCCEEEecc
Confidence 778888999887776654
No 240
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.30 E-value=4.7e-12 Score=110.63 Aligned_cols=144 Identities=12% Similarity=0.028 Sum_probs=98.6
Q ss_pred HHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC---CC-----
Q 024021 101 LHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC---PT----- 172 (274)
Q Consensus 101 ~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~----- 172 (274)
+++.....+.+|||+|||+|.++..+++...+|+++|+++.+++.|+++...++. ++++|+.+|+.+.. ..
T Consensus 206 ~~~~~~~~~~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~~n~~~ng~-~~v~~~~~d~~~~~~~~~~~~~~~ 284 (369)
T 3bt7_A 206 ALDVTKGSKGDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAANHI-DNVQIIRMAAEEFTQAMNGVREFN 284 (369)
T ss_dssp HHHHTTTCCSEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHHHHHHHTTC-CSEEEECCCSHHHHHHHSSCCCCT
T ss_pred HHHHhhcCCCEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECCHHHHHHHHhhccccc
Confidence 3343344467899999999999999998777999999999999999999988876 47999999987621 11
Q ss_pred ---------CCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcE
Q 024021 173 ---------ELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQA 243 (274)
Q Consensus 173 ---------~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 243 (274)
.+||+|++......+. ..+.+.|+++|.++.+..++. . -..++.. +.. ||.+
T Consensus 285 ~l~~~~~~~~~fD~Vv~dPPr~g~~--------~~~~~~l~~~g~ivyvsc~p~--------t-~ard~~~-l~~-~y~~ 345 (369)
T 3bt7_A 285 RLQGIDLKSYQCETIFVDPPRSGLD--------SETEKMVQAYPRILYISCNPE--------T-LCKNLET-LSQ-THKV 345 (369)
T ss_dssp TGGGSCGGGCCEEEEEECCCTTCCC--------HHHHHHHTTSSEEEEEESCHH--------H-HHHHHHH-HHH-HEEE
T ss_pred cccccccccCCCCEEEECcCccccH--------HHHHHHHhCCCEEEEEECCHH--------H-HHHHHHH-Hhh-CcEE
Confidence 3799999765543332 345555668888777664321 0 1233333 333 7988
Q ss_pred EEEeecccccCCccchhHHHHh
Q 024021 244 ISIVDNKLAIGPRKGREKLGRW 265 (274)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~ 265 (274)
..+...+. ++.-...|.+.++
T Consensus 346 ~~~~~~D~-FP~T~HvE~v~ll 366 (369)
T 3bt7_A 346 ERLALFDQ-FPYTHHMQCGVLL 366 (369)
T ss_dssp EEEEEECC-STTSSCCEEEEEE
T ss_pred EEEEeecc-CCCCCcEEEEEEE
Confidence 88776543 3333445555444
No 241
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.28 E-value=1.2e-11 Score=109.85 Aligned_cols=132 Identities=25% Similarity=0.364 Sum_probs=96.7
Q ss_pred ccHHHHHHHhcCC-CCCCeEEEEcCCcchhHHHhhC---CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC
Q 024021 94 PAPIIVHLHQSGA-LPKGRALVPGCGTGYDVVAMAS---PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW 169 (274)
Q Consensus 94 ~~~~~~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 169 (274)
+......++.... .++.+|||+|||+|.++..+++ .+.+++|+|+++.+++.| .+++++.+|+...
T Consensus 24 P~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----------~~~~~~~~D~~~~ 93 (421)
T 2ih2_A 24 PPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----------PWAEGILADFLLW 93 (421)
T ss_dssp CHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----------TTEEEEESCGGGC
T ss_pred CHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----------CCCcEEeCChhhc
Confidence 3444444554443 2457999999999999999886 457999999999988766 3589999999887
Q ss_pred CCCCCeeEEEecccccccC----------hhHH-----------------HHHHHHHHhcccCCcEEEEEEccCCCCCCC
Q 024021 170 CPTELFDLIFDYTFFCAIE----------PEMR-----------------AAWAQKIKDFLKPDGELITLMFPISDHVGG 222 (274)
Q Consensus 170 ~~~~~~D~v~~~~~~~~~~----------~~~~-----------------~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~ 222 (274)
.+.++||+|+++.++.... ++.. ..+++.+.++|+|||.++++.......
T Consensus 94 ~~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~--- 170 (421)
T 2ih2_A 94 EPGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLV--- 170 (421)
T ss_dssp CCSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGT---
T ss_pred CccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhc---
Confidence 6667899999987764321 2221 256899999999999988877432100
Q ss_pred CCcccCHHHHHHHHhcCCC
Q 024021 223 PPYKVSVSDYEEVLQPMGF 241 (274)
Q Consensus 223 ~~~~~~~~~~~~~l~~~Gf 241 (274)
....+.+++.+.+.|+
T Consensus 171 ---~~~~~~lr~~l~~~~~ 186 (421)
T 2ih2_A 171 ---LEDFALLREFLAREGK 186 (421)
T ss_dssp ---CGGGHHHHHHHHHHSE
T ss_pred ---CccHHHHHHHHHhcCC
Confidence 1135678888888887
No 242
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.28 E-value=2.2e-12 Score=108.10 Aligned_cols=114 Identities=15% Similarity=0.042 Sum_probs=78.5
Q ss_pred HHHHHhcC-CCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHh-hcCCCCcceEEE--EcccCCCCCCC
Q 024021 98 IVHLHQSG-ALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELS-SSLPNAKFVSFL--KADFFTWCPTE 173 (274)
Q Consensus 98 ~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~~~~~--~~d~~~~~~~~ 173 (274)
+..+.+.. ..++.+|||+|||+|.++..+++. .+|+|+|+++ ++..+++.. .......++.++ .+|+.+.. ++
T Consensus 71 L~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~-~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~-~~ 147 (276)
T 2wa2_A 71 LAWIDERGGVELKGTVVDLGCGRGSWSYYAASQ-PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME-PF 147 (276)
T ss_dssp HHHHHHTTSCCCCEEEEEESCTTCHHHHHHHTS-TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC-CC
T ss_pred HHHHHHcCCCCCCCEEEEeccCCCHHHHHHHHc-CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC-CC
Confidence 44444433 235679999999999999999888 7999999998 533332211 011111268999 89988754 67
Q ss_pred CeeEEEecccccccCh---hHH--HHHHHHHHhcccCCc--EEEEEEcc
Q 024021 174 LFDLIFDYTFFCAIEP---EMR--AAWAQKIKDFLKPDG--ELITLMFP 215 (274)
Q Consensus 174 ~~D~v~~~~~~~~~~~---~~~--~~~l~~~~~~L~pgG--~~~~~~~~ 215 (274)
+||+|++... +.... +.. ..+++.+.++|+||| .+++..+.
T Consensus 148 ~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 148 QADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp CCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred CcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 8999999876 33221 111 137899999999999 98887654
No 243
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.27 E-value=1.8e-11 Score=102.94 Aligned_cols=115 Identities=16% Similarity=0.123 Sum_probs=84.2
Q ss_pred CCCCeEEEEcCCc------chhHHHhhC---CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEE-EEcccCCCCCCCCee
Q 024021 107 LPKGRALVPGCGT------GYDVVAMAS---PERYVVGLEISDIAIKKAEELSSSLPNAKFVSF-LKADFFTWCPTELFD 176 (274)
Q Consensus 107 ~~~~~vLDiG~G~------G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~-~~~d~~~~~~~~~~D 176 (274)
.++.+|||+|||+ |. ..+++ .+.+|+|+|+++. + .++++ +++|+.+....++||
T Consensus 62 ~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v------~~v~~~i~gD~~~~~~~~~fD 125 (290)
T 2xyq_A 62 PYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------V------SDADSTLIGDCATVHTANKWD 125 (290)
T ss_dssp CTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------B------CSSSEEEESCGGGCCCSSCEE
T ss_pred CCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------C------CCCEEEEECccccCCccCccc
Confidence 4567999999944 65 22332 3579999999987 1 25888 999998855557899
Q ss_pred EEEecccccc--------c-ChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEe
Q 024021 177 LIFDYTFFCA--------I-EPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIV 247 (274)
Q Consensus 177 ~v~~~~~~~~--------~-~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 247 (274)
+|+++..... . .......+++.+.++|+|||.+++..+... ...++.+.++..||..+.+.
T Consensus 126 ~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~----------~~~~l~~~l~~~GF~~v~~~ 195 (290)
T 2xyq_A 126 LIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHS----------WNADLYKLMGHFSWWTAFVT 195 (290)
T ss_dssp EEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSS----------CCHHHHHHHTTEEEEEEEEE
T ss_pred EEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccC----------CHHHHHHHHHHcCCcEEEEE
Confidence 9999754221 1 012345789999999999999999775432 34588899999999877664
No 244
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.27 E-value=3.8e-12 Score=106.07 Aligned_cols=116 Identities=14% Similarity=0.084 Sum_probs=79.3
Q ss_pred HHHHHHHhcC-CCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHh-hcCCCCcceEEE--EcccCCCCC
Q 024021 96 PIIVHLHQSG-ALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELS-SSLPNAKFVSFL--KADFFTWCP 171 (274)
Q Consensus 96 ~~~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~~~~~--~~d~~~~~~ 171 (274)
..+..+.+.. ..++.+|||+|||+|.++..+++. .+|+|+|+++ ++..+++.. .......++.++ ++|+.+..
T Consensus 61 ~KL~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~-~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~- 137 (265)
T 2oxt_A 61 AKLAWMEERGYVELTGRVVDLGCGRGGWSYYAASR-PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP- 137 (265)
T ss_dssp HHHHHHHHHTSCCCCEEEEEESCTTSHHHHHHHTS-TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC-
T ss_pred HHHHHHHHcCCCCCCCEEEEeCcCCCHHHHHHHHc-CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC-
Confidence 3345555443 335679999999999999999887 7999999998 432221111 000111268999 89998754
Q ss_pred CCCeeEEEecccccccChh---HH--HHHHHHHHhcccCCc--EEEEEEcc
Q 024021 172 TELFDLIFDYTFFCAIEPE---MR--AAWAQKIKDFLKPDG--ELITLMFP 215 (274)
Q Consensus 172 ~~~~D~v~~~~~~~~~~~~---~~--~~~l~~~~~~L~pgG--~~~~~~~~ 215 (274)
+++||+|++... ++.... .. ..+++.+.++|+||| .+++..+.
T Consensus 138 ~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 138 VERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred CCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 578999999876 332211 11 137899999999999 98887754
No 245
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.25 E-value=4.6e-11 Score=101.35 Aligned_cols=78 Identities=17% Similarity=0.159 Sum_probs=62.8
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFCA 186 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~ 186 (274)
.++.+|||+|||+|.++..+++.+.+|+|+|+++.+++.++++....+. ++++++.+|+.+... ++||+|+++.+++.
T Consensus 41 ~~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~~~~~-~~v~~~~~D~~~~~~-~~~D~Vv~n~py~~ 118 (299)
T 2h1r_A 41 KSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCLYEGY-NNLEVYEGDAIKTVF-PKFDVCTANIPYKI 118 (299)
T ss_dssp CTTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHHHTTC-CCEEC----CCSSCC-CCCSEEEEECCGGG
T ss_pred CCcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECchhhCCc-ccCCEEEEcCCccc
Confidence 4567999999999999999999888999999999999999998865544 579999999987543 47999999877654
No 246
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.24 E-value=9.3e-11 Score=105.47 Aligned_cols=125 Identities=15% Similarity=0.110 Sum_probs=93.1
Q ss_pred CCCeEEEEcCCcchhHHHhhC---CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC--CCCCeeEEEecc
Q 024021 108 PKGRALVPGCGTGYDVVAMAS---PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC--PTELFDLIFDYT 182 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~D~v~~~~ 182 (274)
++.+|||+|||+|..+..+++ .+..|+++|+++.+++.+++++...+.. ++.++.+|..... ..+.||.|++..
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~-nv~~~~~D~~~~~~~~~~~fD~Il~D~ 195 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGIS-NVALTHFDGRVFGAAVPEMFDAILLDA 195 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCCSTTHHHHSTTCEEEEEEEC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEeCCHHHhhhhccccCCEEEECC
Confidence 678999999999999998887 2469999999999999999999877653 6999999998732 456899999843
Q ss_pred c------ccc-------cChh-------HHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCC
Q 024021 183 F------FCA-------IEPE-------MRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMG 240 (274)
Q Consensus 183 ~------~~~-------~~~~-------~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 240 (274)
. +.. +.++ ....++..+.++|+|||++++.+.+.... -+.+.+..+++.++
T Consensus 196 PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~-------Ene~vv~~~l~~~~ 266 (479)
T 2frx_A 196 PCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQE-------ENEAVCLWLKETYP 266 (479)
T ss_dssp CCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSST-------TTHHHHHHHHHHST
T ss_pred CcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcc-------cCHHHHHHHHHHCC
Confidence 2 211 1111 12478899999999999999877544211 13445566666665
No 247
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.24 E-value=1.7e-11 Score=102.03 Aligned_cols=97 Identities=14% Similarity=0.055 Sum_probs=78.2
Q ss_pred CCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcC--C-CCcceEEEEcccCCCCCCCCeeEEEecccc
Q 024021 108 PKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSL--P-NAKFVSFLKADFFTWCPTELFDLIFDYTFF 184 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~--~-~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~ 184 (274)
.+.+|||+|||+|..+..+++.+.+|+++|+++.+++.|+++++.. + ..++++++.+|..+.. ++||+|++...
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~--~~fD~Ii~d~~- 148 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI--KKYDLIFCLQE- 148 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC--CCEEEEEESSC-
T ss_pred CCCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH--hhCCEEEECCC-
Confidence 4579999999999999988765579999999999999999876431 1 1257999999998755 78999998621
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024021 185 CAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 185 ~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 213 (274)
+ + ..+++.+.++|+|||++++..
T Consensus 149 ---d-p--~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 149 ---P-D--IHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp ---C-C--HHHHHHHHTTEEEEEEEEEEE
T ss_pred ---C-h--HHHHHHHHHhcCCCcEEEEEc
Confidence 1 2 237899999999999998864
No 248
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.24 E-value=5e-11 Score=94.46 Aligned_cols=117 Identities=22% Similarity=0.248 Sum_probs=82.7
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC-C----------CeEEEEeCChHHHHHHHHHhhcCCCCcceEEE-EcccCCC-----
Q 024021 107 LPKGRALVPGCGTGYDVVAMASP-E----------RYVVGLEISDIAIKKAEELSSSLPNAKFVSFL-KADFFTW----- 169 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~-~----------~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~-~~d~~~~----- 169 (274)
.++.+|||+|||+|.++..+++. + .+|+++|+++.. . ..+++++ .+|+...
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~-~~~~~~~~~~d~~~~~~~~~ 88 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------P-LEGATFLCPADVTDPRTSQR 88 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------C-CTTCEEECSCCTTSHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------c-CCCCeEEEeccCCCHHHHHH
Confidence 45689999999999999999873 3 789999999831 0 1458888 8888762
Q ss_pred ----CCCCCeeEEEeccccccc----Chh-----HHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHH
Q 024021 170 ----CPTELFDLIFDYTFFCAI----EPE-----MRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVL 236 (274)
Q Consensus 170 ----~~~~~~D~v~~~~~~~~~----~~~-----~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 236 (274)
.+.++||+|++...++.. .+. ....+++.+.++|+|||.+++..+... ...++.+.+
T Consensus 89 ~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~----------~~~~~~~~l 158 (196)
T 2nyu_A 89 ILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGS----------QSRRLQRRL 158 (196)
T ss_dssp HHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSG----------GGHHHHHHH
T ss_pred HHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCc----------cHHHHHHHH
Confidence 234589999997654431 111 114788999999999999999875432 345666666
Q ss_pred hcCCCcEEEE
Q 024021 237 QPMGFQAISI 246 (274)
Q Consensus 237 ~~~Gf~~~~~ 246 (274)
+.. |..+..
T Consensus 159 ~~~-f~~v~~ 167 (196)
T 2nyu_A 159 TEE-FQNVRI 167 (196)
T ss_dssp HHH-EEEEEE
T ss_pred HHH-hcceEE
Confidence 653 655444
No 249
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.23 E-value=1.1e-10 Score=103.92 Aligned_cols=131 Identities=15% Similarity=0.101 Sum_probs=97.3
Q ss_pred CCCCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC---CCCCCeeEEEe
Q 024021 106 ALPKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW---CPTELFDLIFD 180 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~D~v~~ 180 (274)
..++.+|||+|||+|..+..+++ .+.+|+++|+++.+++.++++....+. ++.++.+|+.+. .+.++||+|++
T Consensus 244 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~--~~~~~~~D~~~~~~~~~~~~fD~Vl~ 321 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM--KATVKQGDGRYPSQWCGEQQFDRILL 321 (429)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC--CCEEEECCTTCTHHHHTTCCEEEEEE
T ss_pred CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC--CeEEEeCchhhchhhcccCCCCEEEE
Confidence 45668999999999999999987 347999999999999999999987764 478999999874 34468999997
Q ss_pred ccc------ccccChh--------------HHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcC-
Q 024021 181 YTF------FCAIEPE--------------MRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPM- 239 (274)
Q Consensus 181 ~~~------~~~~~~~--------------~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~- 239 (274)
... +...++. ....+++.+.++|+|||++++.+.+.... -..+.+.+.++.+
T Consensus 322 D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~-------ene~~v~~~l~~~~ 394 (429)
T 1sqg_A 322 DAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPE-------ENSLQIKAFLQRTA 394 (429)
T ss_dssp ECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGG-------GTHHHHHHHHHHCT
T ss_pred eCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChh-------hHHHHHHHHHHhCC
Confidence 432 2222211 11478999999999999999987544211 1345677777776
Q ss_pred CCcEEE
Q 024021 240 GFQAIS 245 (274)
Q Consensus 240 Gf~~~~ 245 (274)
+|..+.
T Consensus 395 ~~~~~~ 400 (429)
T 1sqg_A 395 DAELCE 400 (429)
T ss_dssp TCEECS
T ss_pred CCEEeC
Confidence 576543
No 250
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.22 E-value=1.7e-11 Score=109.67 Aligned_cols=122 Identities=16% Similarity=0.186 Sum_probs=92.0
Q ss_pred CccHHHHHHHhcC-CCCCCeEEEEcCCcchhHHHhhC---------------CCCeEEEEeCChHHHHHHHHHhhcCCCC
Q 024021 93 QPAPIIVHLHQSG-ALPKGRALVPGCGTGYDVVAMAS---------------PERYVVGLEISDIAIKKAEELSSSLPNA 156 (274)
Q Consensus 93 ~~~~~~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~---------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~ 156 (274)
++......++... ..++.+|||+|||+|.++..+++ .+.+++|+|+++.++..|+.+....+..
T Consensus 155 TP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~ 234 (445)
T 2okc_A 155 TPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIG 234 (445)
T ss_dssp CCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCC
T ss_pred CcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCC
Confidence 4455444444433 33457999999999999987765 2358999999999999999998776653
Q ss_pred c-ceEEEEcccCCCCCCCCeeEEEecccccccChh---------------HHHHHHHHHHhcccCCcEEEEEEc
Q 024021 157 K-FVSFLKADFFTWCPTELFDLIFDYTFFCAIEPE---------------MRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 157 ~-~~~~~~~d~~~~~~~~~~D~v~~~~~~~~~~~~---------------~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
. ++++..+|........+||+|+++.++...... ....++.++.+.|+|||++.++..
T Consensus 235 ~~~~~i~~gD~l~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 235 TDRSPIVCEDSLEKEPSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp SSCCSEEECCTTTSCCSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCCCEeeCCCCCCcccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 2 688999999875555689999999888764211 113688999999999999887763
No 251
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.20 E-value=1e-11 Score=105.55 Aligned_cols=114 Identities=12% Similarity=0.078 Sum_probs=76.9
Q ss_pred HHHHHhcC-CCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeC----ChHHHHHHHHHhhcCCCCcceEEEEc-ccCCCCC
Q 024021 98 IVHLHQSG-ALPKGRALVPGCGTGYDVVAMASPERYVVGLEI----SDIAIKKAEELSSSLPNAKFVSFLKA-DFFTWCP 171 (274)
Q Consensus 98 ~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~----~~~~~~~a~~~~~~~~~~~~~~~~~~-d~~~~~~ 171 (274)
+..+.+.. ..++.+|||+|||+|.++..+++. .+|+|+|+ ++.+++.+. ....+ .++++++.+ |+....
T Consensus 71 L~~i~~~~~~~~g~~VLDlGcG~G~~s~~la~~-~~V~gvD~~~~~~~~~~~~~~--~~~~~-~~~v~~~~~~D~~~l~- 145 (305)
T 2p41_A 71 LRWFVERNLVTPEGKVVDLGCGRGGWSYYCGGL-KNVREVKGLTKGGPGHEEPIP--MSTYG-WNLVRLQSGVDVFFIP- 145 (305)
T ss_dssp HHHHHHTTSSCCCEEEEEETCTTSHHHHHHHTS-TTEEEEEEECCCSTTSCCCCC--CCSTT-GGGEEEECSCCTTTSC-
T ss_pred HHHHHHcCCCCCCCEEEEEcCCCCHHHHHHHhc-CCEEEEeccccCchhHHHHHH--hhhcC-CCCeEEEeccccccCC-
Confidence 44444432 334579999999999999999888 68999999 554332110 11111 256999999 888753
Q ss_pred CCCeeEEEeccccc---ccChhH-HHHHHHHHHhcccCCcEEEEEEccC
Q 024021 172 TELFDLIFDYTFFC---AIEPEM-RAAWAQKIKDFLKPDGELITLMFPI 216 (274)
Q Consensus 172 ~~~~D~v~~~~~~~---~~~~~~-~~~~l~~~~~~L~pgG~~~~~~~~~ 216 (274)
.++||+|++...+. +..+.. ...++..+.++|+|||.+++..+..
T Consensus 146 ~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 146 PERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred cCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 46899999977653 111111 1157888999999999988866543
No 252
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.19 E-value=1.5e-10 Score=101.56 Aligned_cols=113 Identities=14% Similarity=0.173 Sum_probs=87.3
Q ss_pred HHhcCC-CCCCeEEEEcCCcchhHHHhhCC--C--------------------------------------CeEEEEeCC
Q 024021 101 LHQSGA-LPKGRALVPGCGTGYDVVAMASP--E--------------------------------------RYVVGLEIS 139 (274)
Q Consensus 101 ~~~~~~-~~~~~vLDiG~G~G~~~~~l~~~--~--------------------------------------~~v~~vD~~ 139 (274)
++.... .++.+|||++||+|.+++.++.. + .+|+|+|++
T Consensus 187 ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid 266 (385)
T 3ldu_A 187 LIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDID 266 (385)
T ss_dssp HHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESC
T ss_pred HHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECC
Confidence 444333 34579999999999999877641 1 479999999
Q ss_pred hHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccccc-cC-hhHHHHHHHHHHhcccC--CcEEEEEE
Q 024021 140 DIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFCA-IE-PEMRAAWAQKIKDFLKP--DGELITLM 213 (274)
Q Consensus 140 ~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~-~~-~~~~~~~l~~~~~~L~p--gG~~~~~~ 213 (274)
+.+++.|+.++...++.++++|.++|+.+..+..+||+|+++..+.. +. .+....+...+.+.|++ |+.+++.+
T Consensus 267 ~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 344 (385)
T 3ldu_A 267 EESIDIARENAEIAGVDEYIEFNVGDATQFKSEDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLIT 344 (385)
T ss_dssp HHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCCceEEEECChhhcCcCCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEE
Confidence 99999999999888877789999999998766678999999988753 22 23445566666666666 88877776
No 253
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.19 E-value=1.2e-10 Score=102.36 Aligned_cols=107 Identities=14% Similarity=0.174 Sum_probs=83.9
Q ss_pred CCCCeEEEEcCCcchhHHHhhC--CC--------------------------------------CeEEEEeCChHHHHHH
Q 024021 107 LPKGRALVPGCGTGYDVVAMAS--PE--------------------------------------RYVVGLEISDIAIKKA 146 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~--~~--------------------------------------~~v~~vD~~~~~~~~a 146 (274)
.++..|||++||+|.+++.++. .+ .+|+|+|+++.+++.|
T Consensus 200 ~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~A 279 (393)
T 3k0b_A 200 HPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIA 279 (393)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHH
Confidence 3457999999999999887765 11 4699999999999999
Q ss_pred HHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccccccc-C-hhHHHHHHHHHHhcccC--CcEEEEEE
Q 024021 147 EELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFCAI-E-PEMRAAWAQKIKDFLKP--DGELITLM 213 (274)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~~-~-~~~~~~~l~~~~~~L~p--gG~~~~~~ 213 (274)
+.++...++.+++++.++|+.+.....+||+|+++..+..- . .+....+...+.+.|++ ||.+++.+
T Consensus 280 r~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 350 (393)
T 3k0b_A 280 KQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLT 350 (393)
T ss_dssp HHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEE
T ss_pred HHHHHHcCCCCceEEEECChHhCCCCCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 99999888877899999999986666789999999887532 1 13344455555556655 88888876
No 254
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.19 E-value=1.7e-10 Score=100.98 Aligned_cols=107 Identities=10% Similarity=0.196 Sum_probs=86.4
Q ss_pred CCCCeEEEEcCCcchhHHHhhC--CC--------------------------------------CeEEEEeCChHHHHHH
Q 024021 107 LPKGRALVPGCGTGYDVVAMAS--PE--------------------------------------RYVVGLEISDIAIKKA 146 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~--~~--------------------------------------~~v~~vD~~~~~~~~a 146 (274)
.++..+||++||+|.+++.++. .+ .+++|+|+++.+++.|
T Consensus 193 ~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~A 272 (384)
T 3ldg_A 193 FPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIA 272 (384)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHH
Confidence 4557999999999999887764 11 4699999999999999
Q ss_pred HHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccccc-c-ChhHHHHHHHHHHhcccC--CcEEEEEE
Q 024021 147 EELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFCA-I-EPEMRAAWAQKIKDFLKP--DGELITLM 213 (274)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~-~-~~~~~~~~l~~~~~~L~p--gG~~~~~~ 213 (274)
++++...++.+++++..+|+.+.....+||+|+++..++. + .......+...+.+.|++ ||.+++.+
T Consensus 273 r~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 343 (384)
T 3ldg_A 273 RKNAREVGLEDVVKLKQMRLQDFKTNKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILT 343 (384)
T ss_dssp HHHHHHTTCTTTEEEEECCGGGCCCCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEE
T ss_pred HHHHHHcCCCCceEEEECChHHCCccCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEE
Confidence 9999998887789999999998666678999999988764 2 224555666667777766 88888877
No 255
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.16 E-value=1.5e-10 Score=95.29 Aligned_cols=87 Identities=15% Similarity=0.153 Sum_probs=66.3
Q ss_pred cHHHHHHHhcCC-CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCC-
Q 024021 95 APIIVHLHQSGA-LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPT- 172 (274)
Q Consensus 95 ~~~~~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~- 172 (274)
...+..++.... .++.+|||+|||+|.++..+++.+.+|+++|+++.+++.++++.... ++++++.+|+.+....
T Consensus 16 ~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~---~~v~~~~~D~~~~~~~~ 92 (244)
T 1qam_A 16 KHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLVDH---DNFQVLNKDILQFKFPK 92 (244)
T ss_dssp HHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTTTC---CSEEEECCCGGGCCCCS
T ss_pred HHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHHHhhccC---CCeEEEEChHHhCCccc
Confidence 344555555443 34579999999999999999988899999999999999999988643 5799999999884332
Q ss_pred -CCeeEEEeccccc
Q 024021 173 -ELFDLIFDYTFFC 185 (274)
Q Consensus 173 -~~~D~v~~~~~~~ 185 (274)
..| .|+++..++
T Consensus 93 ~~~~-~vv~nlPy~ 105 (244)
T 1qam_A 93 NQSY-KIFGNIPYN 105 (244)
T ss_dssp SCCC-EEEEECCGG
T ss_pred CCCe-EEEEeCCcc
Confidence 345 456555543
No 256
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=99.10 E-value=3.5e-09 Score=91.88 Aligned_cols=145 Identities=17% Similarity=0.214 Sum_probs=102.6
Q ss_pred CCeEEEEcCCcchhHHHhhC-----------------CCCeEEEEeCChHHHHHHHHHhhcCC-----------CCcceE
Q 024021 109 KGRALVPGCGTGYDVVAMAS-----------------PERYVVGLEISDIAIKKAEELSSSLP-----------NAKFVS 160 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~~-----------------~~~~v~~vD~~~~~~~~a~~~~~~~~-----------~~~~~~ 160 (274)
..+|+|+|||+|.++..+.. +..+|...|+-....+..-+.++... ...+..
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 36899999999999877621 34589999997776666655554321 001223
Q ss_pred EEE---cccCC-CCCCCCeeEEEecccccccCh------------------------------------hHHHHHHHHHH
Q 024021 161 FLK---ADFFT-WCPTELFDLIFDYTFFCAIEP------------------------------------EMRAAWAQKIK 200 (274)
Q Consensus 161 ~~~---~d~~~-~~~~~~~D~v~~~~~~~~~~~------------------------------------~~~~~~l~~~~ 200 (274)
|+. +.+.. ..|.+++|+|+++.++|+++. .++..+++..+
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333 33333 678899999999999999851 14556788999
Q ss_pred hcccCCcEEEEEEccCCCC------------------------------------CCCCCcccCHHHHHHHHh-cCCCcE
Q 024021 201 DFLKPDGELITLMFPISDH------------------------------------VGGPPYKVSVSDYEEVLQ-PMGFQA 243 (274)
Q Consensus 201 ~~L~pgG~~~~~~~~~~~~------------------------------------~~~~~~~~~~~~~~~~l~-~~Gf~~ 243 (274)
+.|+|||++++...+..+. ..-|.++.+.+|+.+.++ +.||.+
T Consensus 213 ~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~~F~I 292 (374)
T 3b5i_A 213 AEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFAI 292 (374)
T ss_dssp HHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHCSEEE
T ss_pred HHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHHHHHHHHHhcCCcEE
Confidence 9999999999877654321 022456679999999998 589999
Q ss_pred EEEeeccccc
Q 024021 244 ISIVDNKLAI 253 (274)
Q Consensus 244 ~~~~~~~~~~ 253 (274)
..++....+.
T Consensus 293 ~~le~~~~~~ 302 (374)
T 3b5i_A 293 DKLVVYKGGS 302 (374)
T ss_dssp EEEEEEECCC
T ss_pred EEEEEEeecC
Confidence 9887765443
No 257
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.09 E-value=2.1e-10 Score=100.32 Aligned_cols=100 Identities=13% Similarity=-0.017 Sum_probs=82.9
Q ss_pred CCCeEEEEcCCcchhHHHhhC--CC-CeEEEEeCChHHHHHHHHHhhcCCCCcc-eEEEEcccCCCC---CCCCeeEEEe
Q 024021 108 PKGRALVPGCGTGYDVVAMAS--PE-RYVVGLEISDIAIKKAEELSSSLPNAKF-VSFLKADFFTWC---PTELFDLIFD 180 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~--~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~-~~~~~~d~~~~~---~~~~~D~v~~ 180 (274)
++.+|||++||+|..++.++. .| .+|+++|+++.+++.+++++..+++.++ ++++.+|+.+.. ..+.||+|++
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~l 131 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDL 131 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEE
Confidence 467999999999999998887 45 4899999999999999999999988766 999999987632 2457999998
Q ss_pred cccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024021 181 YTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 181 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 213 (274)
.. +.. + ..+++.+.+.|++||++++..
T Consensus 132 DP-~g~-~----~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 132 DP-FGT-P----VPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp CC-SSC-C----HHHHHHHHHHEEEEEEEEEEE
T ss_pred CC-CcC-H----HHHHHHHHHHhCCCCEEEEEe
Confidence 76 221 1 357888999999999888876
No 258
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.08 E-value=4.4e-09 Score=89.35 Aligned_cols=141 Identities=11% Similarity=0.108 Sum_probs=96.8
Q ss_pred cHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhC---CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC
Q 024021 95 APIIVHLHQSGALPKGRALVPGCGTGYDVVAMAS---PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP 171 (274)
Q Consensus 95 ~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 171 (274)
...+..++. ..++.+|||+|||+|..+..+++ ...+|+++|+++.+++.+++++...+. .+++++.+|+.+..+
T Consensus 91 s~l~~~~l~--~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~-~~v~~~~~D~~~~~~ 167 (309)
T 2b9e_A 91 SCLPAMLLD--PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGV-SCCELAEEDFLAVSP 167 (309)
T ss_dssp GGHHHHHHC--CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEECCGGGSCT
T ss_pred HHHHHHHhC--CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC-CeEEEEeCChHhcCc
Confidence 333444443 45678999999999999998886 346999999999999999999988776 469999999887433
Q ss_pred C----CCeeEEEecccc------cccCh----------------hHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCc
Q 024021 172 T----ELFDLIFDYTFF------CAIEP----------------EMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPY 225 (274)
Q Consensus 172 ~----~~~D~v~~~~~~------~~~~~----------------~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~ 225 (274)
. .+||.|++.... ..-++ .....+++.+.++++ ||+++..+.+...
T Consensus 168 ~~~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~------- 239 (309)
T 2b9e_A 168 SDPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLCQ------- 239 (309)
T ss_dssp TCGGGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCCG-------
T ss_pred cccccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCCh-------
Confidence 2 479999974332 11011 011346777777786 8988876644321
Q ss_pred ccCHHHHHHHHhcC-C-CcEEEE
Q 024021 226 KVSVSDYEEVLQPM-G-FQAISI 246 (274)
Q Consensus 226 ~~~~~~~~~~l~~~-G-f~~~~~ 246 (274)
.-+.+.+.+.++++ + |+.+.+
T Consensus 240 ~Ene~~v~~~l~~~~~~~~~~~~ 262 (309)
T 2b9e_A 240 EENEDVVRDALQQNPGAFRLAPA 262 (309)
T ss_dssp GGTHHHHHHHHTTSTTTEEECCC
T ss_pred HHhHHHHHHHHHhCCCcEEEecc
Confidence 11456677778776 3 665543
No 259
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.08 E-value=9.3e-10 Score=87.26 Aligned_cols=96 Identities=15% Similarity=0.006 Sum_probs=76.1
Q ss_pred CCCeEEEEcCCcchhHHHhhCC-CCeEEEEeCChHHHHHHHHHhhcCCC--CcceEEEEcccCCC---------------
Q 024021 108 PKGRALVPGCGTGYDVVAMASP-ERYVVGLEISDIAIKKAEELSSSLPN--AKFVSFLKADFFTW--------------- 169 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~~--------------- 169 (274)
+..+|||+|| |+.+..+++. +.+|+.+|.+++..+.|++++...+. .++++++.+|+.+.
T Consensus 30 ~a~~VLEiGt--GySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l 107 (202)
T 3cvo_A 30 EAEVILEYGS--GGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSY 107 (202)
T ss_dssp HCSEEEEESC--SHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGT
T ss_pred CCCEEEEECc--hHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhH
Confidence 4689999998 5778888774 78999999999999999999998887 78999999996542
Q ss_pred ---------C-CCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEE
Q 024021 170 ---------C-PTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITL 212 (274)
Q Consensus 170 ---------~-~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~ 212 (274)
. ..++||+|+..+- .....+..+.+.|+|||++++-
T Consensus 108 ~~~~~~i~~~~~~~~fDlIfIDg~-------k~~~~~~~~l~~l~~GG~Iv~D 153 (202)
T 3cvo_A 108 PDYPLAVWRTEGFRHPDVVLVDGR-------FRVGCALATAFSITRPVTLLFD 153 (202)
T ss_dssp THHHHGGGGCTTCCCCSEEEECSS-------SHHHHHHHHHHHCSSCEEEEET
T ss_pred HHHhhhhhccccCCCCCEEEEeCC-------CchhHHHHHHHhcCCCeEEEEe
Confidence 1 1367999996542 2235566777999999999663
No 260
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.07 E-value=3.5e-10 Score=95.37 Aligned_cols=87 Identities=15% Similarity=0.098 Sum_probs=70.3
Q ss_pred HHHHHHHhcCC-CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-CCCC
Q 024021 96 PIIVHLHQSGA-LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-CPTE 173 (274)
Q Consensus 96 ~~~~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~ 173 (274)
..+..++.... .++.+|||||||+|.++..+++.+.+|+++|+++.+++.++++.... ++++++.+|+.+. .+..
T Consensus 37 ~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~~~---~~v~vi~gD~l~~~~~~~ 113 (295)
T 3gru_A 37 NFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKELY---NNIEIIWGDALKVDLNKL 113 (295)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHHHC---SSEEEEESCTTTSCGGGS
T ss_pred HHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhccC---CCeEEEECchhhCCcccC
Confidence 34445555443 35579999999999999999988889999999999999999988633 5799999999983 3445
Q ss_pred CeeEEEeccccc
Q 024021 174 LFDLIFDYTFFC 185 (274)
Q Consensus 174 ~~D~v~~~~~~~ 185 (274)
.||.|+++..++
T Consensus 114 ~fD~Iv~NlPy~ 125 (295)
T 3gru_A 114 DFNKVVANLPYQ 125 (295)
T ss_dssp CCSEEEEECCGG
T ss_pred CccEEEEeCccc
Confidence 799999887765
No 261
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.07 E-value=5.3e-10 Score=96.04 Aligned_cols=107 Identities=18% Similarity=0.164 Sum_probs=78.5
Q ss_pred CCCeEEEEcCCcchhHHHhhCCC-CeEEEEeCChHHHHHHHHHhhcCC---CC----cceEEEEcccCCCC-----CCCC
Q 024021 108 PKGRALVPGCGTGYDVVAMASPE-RYVVGLEISDIAIKKAEELSSSLP---NA----KFVSFLKADFFTWC-----PTEL 174 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~---~~----~~~~~~~~d~~~~~-----~~~~ 174 (274)
.+.+||++|||+|..+..+++.+ .+|+++|+++.+++.|+++++..+ +. ++++++.+|..+.. ..++
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~ 267 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 267 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCC
Confidence 45799999999999999888743 589999999999999999986432 11 27999999998833 3578
Q ss_pred eeEEEecccc---cccChh-HHHHHHHHH----HhcccCCcEEEEEEc
Q 024021 175 FDLIFDYTFF---CAIEPE-MRAAWAQKI----KDFLKPDGELITLMF 214 (274)
Q Consensus 175 ~D~v~~~~~~---~~~~~~-~~~~~l~~~----~~~L~pgG~~~~~~~ 214 (274)
||+|++...- ...+.. ....+++.+ .++|+|||++++...
T Consensus 268 fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~ 315 (364)
T 2qfm_A 268 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 315 (364)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcC
Confidence 9999987532 111100 113444444 999999999998763
No 262
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.05 E-value=1.1e-11 Score=102.15 Aligned_cols=111 Identities=14% Similarity=0.139 Sum_probs=80.9
Q ss_pred HHHHHhcCC-CCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC-C-CCC
Q 024021 98 IVHLHQSGA-LPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC-P-TEL 174 (274)
Q Consensus 98 ~~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~-~~~ 174 (274)
+..++.... .++.+|||+|||+|.++..+++.+.+|+|+|+++.+++.++++... .++++++.+|+.+.. + .++
T Consensus 18 ~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~~---~~~v~~~~~D~~~~~~~~~~~ 94 (245)
T 1yub_A 18 LNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLKL---NTRVTLIHQDILQFQFPNKQR 94 (245)
T ss_dssp HHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTTT---CSEEEECCSCCTTTTCCCSSE
T ss_pred HHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhcc---CCceEEEECChhhcCcccCCC
Confidence 444444433 3457999999999999999998888999999999999998877652 257999999998843 3 257
Q ss_pred eeEEEecccccccChhHHHHHH--------------HHHHhcccCCcEEEEEE
Q 024021 175 FDLIFDYTFFCAIEPEMRAAWA--------------QKIKDFLKPDGELITLM 213 (274)
Q Consensus 175 ~D~v~~~~~~~~~~~~~~~~~l--------------~~~~~~L~pgG~~~~~~ 213 (274)
| .|+++..+.. .......++ +.+.++|+|||.+.+..
T Consensus 95 f-~vv~n~Py~~-~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 95 Y-KIVGNIPYHL-STQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp E-EEEEECCSSS-CHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred c-EEEEeCCccc-cHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 8 6777655543 222222332 56889999999877644
No 263
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.03 E-value=1.7e-09 Score=89.43 Aligned_cols=84 Identities=8% Similarity=0.019 Sum_probs=65.5
Q ss_pred HHHHHhcC-CCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-----
Q 024021 98 IVHLHQSG-ALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP----- 171 (274)
Q Consensus 98 ~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~----- 171 (274)
+..++... ..++.+|||||||+|.++..+++.+.+|+++|+++.+++.++++.... ++++++.+|+.+...
T Consensus 18 ~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~~---~~v~~i~~D~~~~~~~~~~~ 94 (255)
T 3tqs_A 18 LQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQQ---KNITIYQNDALQFDFSSVKT 94 (255)
T ss_dssp HHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTTC---TTEEEEESCTTTCCGGGSCC
T ss_pred HHHHHHhcCCCCcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhhC---CCcEEEEcchHhCCHHHhcc
Confidence 33344433 345679999999999999999998899999999999999999998652 579999999988422
Q ss_pred CCCeeEEEeccccc
Q 024021 172 TELFDLIFDYTFFC 185 (274)
Q Consensus 172 ~~~~D~v~~~~~~~ 185 (274)
.++|| |+++..+.
T Consensus 95 ~~~~~-vv~NlPY~ 107 (255)
T 3tqs_A 95 DKPLR-VVGNLPYN 107 (255)
T ss_dssp SSCEE-EEEECCHH
T ss_pred CCCeE-EEecCCcc
Confidence 34688 66655543
No 264
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.02 E-value=1.4e-09 Score=90.54 Aligned_cols=95 Identities=14% Similarity=0.034 Sum_probs=71.6
Q ss_pred HHHHHHhcC-CCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCC--C
Q 024021 97 IIVHLHQSG-ALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPT--E 173 (274)
Q Consensus 97 ~~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~--~ 173 (274)
.+..++... ..++ +|||+|||+|.++..+++.+.+|+++|+++.+++.++++... .+++++.+|+.+.... .
T Consensus 35 i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~~~----~~v~vi~~D~l~~~~~~~~ 109 (271)
T 3fut_A 35 HLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLSG----LPVRLVFQDALLYPWEEVP 109 (271)
T ss_dssp HHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTTT----SSEEEEESCGGGSCGGGSC
T ss_pred HHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCC----CCEEEEECChhhCChhhcc
Confidence 344444433 3445 999999999999999999889999999999999999998862 4799999999884332 2
Q ss_pred CeeEEEecccccccChhHHHHHHH
Q 024021 174 LFDLIFDYTFFCAIEPEMRAAWAQ 197 (274)
Q Consensus 174 ~~D~v~~~~~~~~~~~~~~~~~l~ 197 (274)
.+|.|+++..++ +..+....+++
T Consensus 110 ~~~~iv~NlPy~-iss~il~~ll~ 132 (271)
T 3fut_A 110 QGSLLVANLPYH-IATPLVTRLLK 132 (271)
T ss_dssp TTEEEEEEECSS-CCHHHHHHHHH
T ss_pred CccEEEecCccc-ccHHHHHHHhc
Confidence 689999887766 44343333433
No 265
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.02 E-value=6e-10 Score=97.28 Aligned_cols=99 Identities=15% Similarity=-0.031 Sum_probs=79.6
Q ss_pred CCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhcC---------------CCCcceEEEEcccCCCC
Q 024021 108 PKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSSL---------------PNAKFVSFLKADFFTWC 170 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~---------------~~~~~~~~~~~d~~~~~ 170 (274)
++.+|||+|||+|..+..+++. +.+|+++|+++.+++.+++++..+ +.. +++++.+|+....
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~-~i~v~~~Da~~~~ 125 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEK-TIVINHDDANRLM 125 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSS-EEEEEESCHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCC-ceEEEcCcHHHHH
Confidence 4689999999999999988873 458999999999999999999876 553 3999999987632
Q ss_pred --CCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024021 171 --PTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 171 --~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 213 (274)
..+.||+|+... +... ..+++.+.+.|++||++++..
T Consensus 126 ~~~~~~fD~I~lDP-~~~~-----~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 126 AERHRYFHFIDLDP-FGSP-----MEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHSTTCEEEEEECC-SSCC-----HHHHHHHHHHEEEEEEEEEEE
T ss_pred HhccCCCCEEEeCC-CCCH-----HHHHHHHHHhcCCCCEEEEEe
Confidence 135799999654 3221 367888999999999888765
No 266
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=99.00 E-value=5.6e-09 Score=90.74 Aligned_cols=143 Identities=11% Similarity=0.108 Sum_probs=97.7
Q ss_pred CCeEEEEcCCcchhHHHhhC-------------------CCCeEEEEeCC-----------hHHHHHHHHHhhcCCCCcc
Q 024021 109 KGRALVPGCGTGYDVVAMAS-------------------PERYVVGLEIS-----------DIAIKKAEELSSSLPNAKF 158 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~~-------------------~~~~v~~vD~~-----------~~~~~~a~~~~~~~~~~~~ 158 (274)
..+|+|+||++|.++..+.. +..+|+..|+- +...+.+++.. +...+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~---g~~~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKEN---GRKIG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHT---CCCTT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhc---cCCCC
Confidence 46899999999999875543 12478888886 44333332221 11123
Q ss_pred eEEEEcccCC----CCCCCCeeEEEecccccccCh---h----------------------------------HHHHHHH
Q 024021 159 VSFLKADFFT----WCPTELFDLIFDYTFFCAIEP---E----------------------------------MRAAWAQ 197 (274)
Q Consensus 159 ~~~~~~d~~~----~~~~~~~D~v~~~~~~~~~~~---~----------------------------------~~~~~l~ 197 (274)
..|+.+.... +.|.+++|+|+++.++|++.. . ++..+|+
T Consensus 130 ~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~ 209 (384)
T 2efj_A 130 SCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLR 209 (384)
T ss_dssp SEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4566654443 678899999999999999742 1 1123377
Q ss_pred HHHhcccCCcEEEEEEccCCCC--C----------------------------CCCCcccCHHHHHHHHhcCC-CcEEEE
Q 024021 198 KIKDFLKPDGELITLMFPISDH--V----------------------------GGPPYKVSVSDYEEVLQPMG-FQAISI 246 (274)
Q Consensus 198 ~~~~~L~pgG~~~~~~~~~~~~--~----------------------------~~~~~~~~~~~~~~~l~~~G-f~~~~~ 246 (274)
..++.|+|||++++...+.... . .-|.+..+.+|+.+++++.| |++..+
T Consensus 210 ~Ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~l 289 (384)
T 2efj_A 210 IHSEELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYL 289 (384)
T ss_dssp HHHHHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEEE
T ss_pred HHHHHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEEE
Confidence 7799999999999988766443 1 12556679999999999985 898888
Q ss_pred eecccccC
Q 024021 247 VDNKLAIG 254 (274)
Q Consensus 247 ~~~~~~~~ 254 (274)
+.......
T Consensus 290 e~~~~~~~ 297 (384)
T 2efj_A 290 ETFNAPYD 297 (384)
T ss_dssp EEEEEETT
T ss_pred EEEeeccc
Confidence 76554443
No 267
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.00 E-value=1.4e-10 Score=96.09 Aligned_cols=79 Identities=14% Similarity=0.064 Sum_probs=64.8
Q ss_pred CCCeEEEEcCCcchhHHHhhCCCCeEEEEeCCh-------HHHHHHHHHhhcCCCCcceEEEEcccCCCC---CC--CCe
Q 024021 108 PKGRALVPGCGTGYDVVAMASPERYVVGLEISD-------IAIKKAEELSSSLPNAKFVSFLKADFFTWC---PT--ELF 175 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~-------~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~--~~~ 175 (274)
++.+|||+|||+|..+..++..+.+|+++|+++ .+++.|+++...++..++++++.+|+.+.. +. ++|
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~~f 162 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQGKP 162 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHCCC
T ss_pred CcCeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCCCc
Confidence 457999999999999999998888999999999 999999888765544456999999998732 22 689
Q ss_pred eEEEecccccc
Q 024021 176 DLIFDYTFFCA 186 (274)
Q Consensus 176 D~v~~~~~~~~ 186 (274)
|+|++..++.+
T Consensus 163 D~V~~dP~~~~ 173 (258)
T 2r6z_A 163 DIVYLDPMYPE 173 (258)
T ss_dssp SEEEECCCC--
T ss_pred cEEEECCCCCC
Confidence 99999877654
No 268
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.99 E-value=9.3e-10 Score=101.24 Aligned_cols=100 Identities=22% Similarity=0.206 Sum_probs=78.9
Q ss_pred CeEEEEcCCcchhHHHhhC----CCC--eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccc
Q 024021 110 GRALVPGCGTGYDVVAMAS----PER--YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTF 183 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~~l~~----~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~ 183 (274)
..|||+|||+|.+....++ .+. +|++||.++ +...+++....+++.++|+++.+|+++...++++|+|++=..
T Consensus 359 ~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~LPEKVDIIVSEwM 437 (637)
T 4gqb_A 359 QVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELL 437 (637)
T ss_dssp EEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCCCSSCEEEEECCCC
T ss_pred cEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceeccCCcccCEEEEEcC
Confidence 5799999999999543333 233 789999997 566788888888888999999999999777789999998655
Q ss_pred ccccChhHHHHHHHHHHhcccCCcEEE
Q 024021 184 FCAIEPEMRAAWAQKIKDFLKPDGELI 210 (274)
Q Consensus 184 ~~~~~~~~~~~~l~~~~~~L~pgG~~~ 210 (274)
-..+..+....++....+.|||||+++
T Consensus 438 G~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 438 GSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp BTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred cccccccCCHHHHHHHHHhcCCCcEEc
Confidence 443433444578888999999999875
No 269
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.98 E-value=7.2e-09 Score=89.32 Aligned_cols=144 Identities=14% Similarity=0.162 Sum_probs=103.4
Q ss_pred CeEEEEcCCcchhHHHhhCC------------------CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc---ccCC
Q 024021 110 GRALVPGCGTGYDVVAMASP------------------ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA---DFFT 168 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~~l~~~------------------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~---d~~~ 168 (274)
.+|+|+||++|.+++.+... ..+|+..|+-....+...+.++......+..|+.+ .+..
T Consensus 53 ~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy~ 132 (359)
T 1m6e_X 53 LAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFYG 132 (359)
T ss_dssp ECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSSS
T ss_pred eEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhhh
Confidence 68999999999988655432 34899999988888888777754211112345444 3333
Q ss_pred -CCCCCCeeEEEecccccccCh-------------------------------hHHHHHHHHHHhcccCCcEEEEEEccC
Q 024021 169 -WCPTELFDLIFDYTFFCAIEP-------------------------------EMRAAWAQKIKDFLKPDGELITLMFPI 216 (274)
Q Consensus 169 -~~~~~~~D~v~~~~~~~~~~~-------------------------------~~~~~~l~~~~~~L~pgG~~~~~~~~~ 216 (274)
+.|.+++|+|+++.++|++.. .++..+|+..++.|+|||++++...+.
T Consensus 133 rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~gr 212 (359)
T 1m6e_X 133 RLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGR 212 (359)
T ss_dssp CCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEEC
T ss_pred ccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEecC
Confidence 678899999999999998742 134566889999999999999987655
Q ss_pred CCCC----------------------------------CCCCcccCHHHHHHHHhcCC-CcEEEEeeccccc
Q 024021 217 SDHV----------------------------------GGPPYKVSVSDYEEVLQPMG-FQAISIVDNKLAI 253 (274)
Q Consensus 217 ~~~~----------------------------------~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~~~~ 253 (274)
.... .-|.+..+.+|+.+.+++.| |.+..++......
T Consensus 213 ~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~e~~~~~~ 284 (359)
T 1m6e_X 213 RSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYW 284 (359)
T ss_dssp SSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEEEEEEET
T ss_pred CCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEEEEEEeecc
Confidence 3320 22456678999999999996 5887776554433
No 270
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.96 E-value=9.8e-10 Score=96.36 Aligned_cols=88 Identities=20% Similarity=0.133 Sum_probs=70.3
Q ss_pred HHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcC--CCCcceEEEEcccCCCCC--
Q 024021 96 PIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSL--PNAKFVSFLKADFFTWCP-- 171 (274)
Q Consensus 96 ~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~~~~~~~~~~d~~~~~~-- 171 (274)
..+..+......++.+|||+|||+|..+..+++.+.+|+++|+++.+++.|+.+.... +. .+++++++|+.+..+
T Consensus 81 e~vA~~~a~~l~~g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~N~~~~~~gl-~~i~~i~~Da~~~L~~~ 159 (410)
T 3ll7_A 81 AVTSSYKSRFIREGTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARHNIPLLLNEG-KDVNILTGDFKEYLPLI 159 (410)
T ss_dssp HHHHHHGGGGSCTTCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHSCTT-CEEEEEESCGGGSHHHH
T ss_pred HHHHHHHHHhcCCCCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHhHHHhccCC-CcEEEEECcHHHhhhhc
Confidence 3344443332334789999999999999999998899999999999999999999866 55 679999999987422
Q ss_pred -CCCeeEEEecccc
Q 024021 172 -TELFDLIFDYTFF 184 (274)
Q Consensus 172 -~~~~D~v~~~~~~ 184 (274)
.++||+|++....
T Consensus 160 ~~~~fDvV~lDPPr 173 (410)
T 3ll7_A 160 KTFHPDYIYVDPAR 173 (410)
T ss_dssp HHHCCSEEEECCEE
T ss_pred cCCCceEEEECCCC
Confidence 2579999997554
No 271
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.93 E-value=5.4e-09 Score=95.48 Aligned_cols=122 Identities=15% Similarity=0.098 Sum_probs=89.0
Q ss_pred CccHHHHHHHhcC-CCCCCeEEEEcCCcchhHHHhhC----C----------------CCeEEEEeCChHHHHHHHHHhh
Q 024021 93 QPAPIIVHLHQSG-ALPKGRALVPGCGTGYDVVAMAS----P----------------ERYVVGLEISDIAIKKAEELSS 151 (274)
Q Consensus 93 ~~~~~~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~----~----------------~~~v~~vD~~~~~~~~a~~~~~ 151 (274)
+|......++... ..++.+|||++||+|.++..+++ . ...++|+|+++.++..|+.++.
T Consensus 153 TP~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~ 232 (541)
T 2ar0_A 153 TPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCL 232 (541)
T ss_dssp CCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHH
Confidence 3444333333332 33457999999999999877654 1 1379999999999999999987
Q ss_pred cCCCCc----ceEEEEcccCCC--CCCCCeeEEEecccccccCh------------hHHHHHHHHHHhcccCCcEEEEEE
Q 024021 152 SLPNAK----FVSFLKADFFTW--CPTELFDLIFDYTFFCAIEP------------EMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 152 ~~~~~~----~~~~~~~d~~~~--~~~~~~D~v~~~~~~~~~~~------------~~~~~~l~~~~~~L~pgG~~~~~~ 213 (274)
..+... ++.+..+|.... ...++||+|+++.++..... .....++.++.+.|+|||++.++.
T Consensus 233 l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~ 312 (541)
T 2ar0_A 233 LHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVV 312 (541)
T ss_dssp TTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HhCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEe
Confidence 766543 278999998762 33468999999988765321 112368999999999999988876
Q ss_pred c
Q 024021 214 F 214 (274)
Q Consensus 214 ~ 214 (274)
.
T Consensus 313 p 313 (541)
T 2ar0_A 313 P 313 (541)
T ss_dssp E
T ss_pred c
Confidence 4
No 272
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.93 E-value=8.7e-10 Score=100.62 Aligned_cols=146 Identities=20% Similarity=0.132 Sum_probs=99.8
Q ss_pred CCccHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCC-----------------CCeEEEEeCChHHHHHHHHHhhcCC
Q 024021 92 GQPAPIIVHLHQSGALPKGRALVPGCGTGYDVVAMASP-----------------ERYVVGLEISDIAIKKAEELSSSLP 154 (274)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~-----------------~~~v~~vD~~~~~~~~a~~~~~~~~ 154 (274)
-+|...+..++........+|||.+||+|.++..+++. ...++|+|+++.++..|+.++...+
T Consensus 228 yTP~~Vv~lmv~ll~p~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~g 307 (544)
T 3khk_A 228 YTPKSIVTLIVEMLEPYKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRG 307 (544)
T ss_dssp CCCHHHHHHHHHHHCCCSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTT
T ss_pred eCCHHHHHHHHHHHhcCCCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhC
Confidence 34555555555444333459999999999998776430 4589999999999999999988777
Q ss_pred CCcceEEEEcccCCC--CCCCCeeEEEecccccc-------------------------cChh--HHHHHHHHHHhcccC
Q 024021 155 NAKFVSFLKADFFTW--CPTELFDLIFDYTFFCA-------------------------IEPE--MRAAWAQKIKDFLKP 205 (274)
Q Consensus 155 ~~~~~~~~~~d~~~~--~~~~~~D~v~~~~~~~~-------------------------~~~~--~~~~~l~~~~~~L~p 205 (274)
...++.+..+|.... .+..+||+|+++.++.. +++. .--.++.++.+.|+|
T Consensus 308 i~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~ 387 (544)
T 3khk_A 308 IDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAP 387 (544)
T ss_dssp CCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEE
T ss_pred CCcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhcc
Confidence 655555588887652 34568999999988764 1110 012588999999999
Q ss_pred CcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCC
Q 024021 206 DGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGF 241 (274)
Q Consensus 206 gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf 241 (274)
||++.++.....-... ......+++.+-+.+.
T Consensus 388 gGr~aiVlP~g~L~~~----~~~~~~iRk~Lle~~~ 419 (544)
T 3khk_A 388 TGSMALLLANGSMSSN----TNNEGEIRKTLVEQDL 419 (544)
T ss_dssp EEEEEEEEETHHHHCC----GGGHHHHHHHHHHTTC
T ss_pred CceEEEEecchhhhcC----cchHHHHHHHHHhCCc
Confidence 9998877632210000 0134677777777654
No 273
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.89 E-value=1.3e-09 Score=90.19 Aligned_cols=127 Identities=20% Similarity=0.222 Sum_probs=85.1
Q ss_pred CCCeEEEEcCCcchhHHHhh---------CC-----CCeEEEEeCCh---HHHH-----------HHHHHhhcC------
Q 024021 108 PKGRALVPGCGTGYDVVAMA---------SP-----ERYVVGLEISD---IAIK-----------KAEELSSSL------ 153 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~---------~~-----~~~v~~vD~~~---~~~~-----------~a~~~~~~~------ 153 (274)
++.+|||+|+|+|.++..++ .+ ..+++++|..| +.+. .|++.....
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 44799999999999987643 22 14899999887 4333 555554331
Q ss_pred -------CCCcceEEEEcccCCCCC---C---CCeeEEEecccccccChhH-HHHHHHHHHhcccCCcEEEEEEccCCCC
Q 024021 154 -------PNAKFVSFLKADFFTWCP---T---ELFDLIFDYTFFCAIEPEM-RAAWAQKIKDFLKPDGELITLMFPISDH 219 (274)
Q Consensus 154 -------~~~~~~~~~~~d~~~~~~---~---~~~D~v~~~~~~~~~~~~~-~~~~l~~~~~~L~pgG~~~~~~~~~~~~ 219 (274)
....+++++.+|+.+..+ . ..||+|+....-..-.++. ...+++.+.++|+|||+++..+
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tys------ 213 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFT------ 213 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEESC------
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEEEe------
Confidence 112467899999877221 1 2799999754211111111 2578999999999999988532
Q ss_pred CCCCCcccCHHHHHHHHhcCCCcEEEEee
Q 024021 220 VGGPPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 220 ~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 248 (274)
....+.+.|+++||.+.+...
T Consensus 214 --------aa~~vrr~L~~aGF~v~~~~g 234 (257)
T 2qy6_A 214 --------SAGFVRRGLQEAGFTMQKRKG 234 (257)
T ss_dssp --------CBHHHHHHHHHHTEEEEEECC
T ss_pred --------CCHHHHHHHHHCCCEEEeCCC
Confidence 235788899999999876543
No 274
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.87 E-value=9.4e-09 Score=96.66 Aligned_cols=108 Identities=15% Similarity=0.155 Sum_probs=81.6
Q ss_pred CCCCeEEEEcCCcchhHHHhhC------C--------------------------------------CCeEEEEeCChHH
Q 024021 107 LPKGRALVPGCGTGYDVVAMAS------P--------------------------------------ERYVVGLEISDIA 142 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~------~--------------------------------------~~~v~~vD~~~~~ 142 (274)
.++..|||++||+|.+++.++. + ...++|+|+++.+
T Consensus 189 ~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~a 268 (703)
T 3v97_A 189 QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARV 268 (703)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHH
T ss_pred CCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHH
Confidence 3557999999999999877654 1 1479999999999
Q ss_pred HHHHHHHhhcCCCCcceEEEEcccCCCCCC---CCeeEEEecccccc-cC-hhHHHHHH---HHHHhcccCCcEEEEEEc
Q 024021 143 IKKAEELSSSLPNAKFVSFLKADFFTWCPT---ELFDLIFDYTFFCA-IE-PEMRAAWA---QKIKDFLKPDGELITLMF 214 (274)
Q Consensus 143 ~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~D~v~~~~~~~~-~~-~~~~~~~l---~~~~~~L~pgG~~~~~~~ 214 (274)
++.|+.++...++.+.++|.++|+.+..++ ++||+|+++.++.. +. ......+. .++.+.+.|||.+++.+.
T Consensus 269 v~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~ilt~ 348 (703)
T 3v97_A 269 IQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSA 348 (703)
T ss_dssp HHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred HHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 999999999998887899999999874322 37999999988764 21 22333333 444455568999888763
No 275
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.87 E-value=2e-09 Score=99.05 Aligned_cols=100 Identities=17% Similarity=0.086 Sum_probs=75.7
Q ss_pred CeEEEEcCCcchhHHHh---hC-CC-----------CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC---
Q 024021 110 GRALVPGCGTGYDVVAM---AS-PE-----------RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP--- 171 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~~l---~~-~~-----------~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~--- 171 (274)
..|||+|||+|.+.... ++ .+ .+|++||.++.++...+.... +++.++|+++.+|+++...
T Consensus 411 ~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~~ 489 (745)
T 3ua3_A 411 VVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIAK 489 (745)
T ss_dssp EEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHHH
T ss_pred cEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhcccccc
Confidence 58999999999996432 21 22 399999999987766665554 5667889999999998432
Q ss_pred ---CCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEE
Q 024021 172 ---TELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELI 210 (274)
Q Consensus 172 ---~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~ 210 (274)
.+++|+|++=..-..++.+.....+..+.+.|+|||+++
T Consensus 490 ~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 490 DRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred cCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 678999998666444444555667888889999999866
No 276
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.85 E-value=6e-09 Score=88.11 Aligned_cols=75 Identities=19% Similarity=0.119 Sum_probs=62.8
Q ss_pred CCCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC---C---CCCeeEE
Q 024021 107 LPKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC---P---TELFDLI 178 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~---~~~~D~v 178 (274)
.++.+|||+|||+|..+..+++. +.+|+|+|.++.+++.|+++....+ ++++++++|+.+.. . .++||.|
T Consensus 25 ~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g--~~v~~v~~d~~~l~~~l~~~g~~~~D~V 102 (301)
T 1m6y_A 25 EDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS--DRVSLFKVSYREADFLLKTLGIEKVDGI 102 (301)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT--TTEEEEECCGGGHHHHHHHTTCSCEEEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCHHHHHHHHHhcCCCCCCEE
Confidence 45689999999999999999873 6799999999999999999987765 58999999987632 1 1579999
Q ss_pred Eeccc
Q 024021 179 FDYTF 183 (274)
Q Consensus 179 ~~~~~ 183 (274)
++...
T Consensus 103 l~D~g 107 (301)
T 1m6y_A 103 LMDLG 107 (301)
T ss_dssp EEECS
T ss_pred EEcCc
Confidence 97654
No 277
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.81 E-value=2.5e-08 Score=90.90 Aligned_cols=129 Identities=13% Similarity=-0.023 Sum_probs=93.5
Q ss_pred CCCeEEEEcCCcchhHHHhhCC-----CCeEEEEeCChHHHHHHHHHhhcCCCC-cceEEEEcccCCC----CCCCCeeE
Q 024021 108 PKGRALVPGCGTGYDVVAMASP-----ERYVVGLEISDIAIKKAEELSSSLPNA-KFVSFLKADFFTW----CPTELFDL 177 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~-----~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~~~~~~~d~~~~----~~~~~~D~ 177 (274)
++.+|+|.+||+|.++..+++. ...++|+|+++.++..|+.+....+.. .++.+..+|.... ....+||+
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD~ 300 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDG 300 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBSE
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccccE
Confidence 4579999999999998777652 468999999999999999998777654 4688999998864 23568999
Q ss_pred EEecccccccC-h------h--------------HHHHHHHHHHhccc-CCcEEEEEEccCCCCCCCCCcccCHHHHHHH
Q 024021 178 IFDYTFFCAIE-P------E--------------MRAAWAQKIKDFLK-PDGELITLMFPISDHVGGPPYKVSVSDYEEV 235 (274)
Q Consensus 178 v~~~~~~~~~~-~------~--------------~~~~~l~~~~~~L~-pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (274)
|+++.++..-. . + .--.++.++.+.|+ |||++.++.....-... .....+++.
T Consensus 301 IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g~Lf~~-----~~~~~iRk~ 375 (542)
T 3lkd_A 301 VLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHGVLFRG-----NAEGTIRKA 375 (542)
T ss_dssp EEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETHHHHCC-----THHHHHHHH
T ss_pred EEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecchHhhCC-----chhHHHHHH
Confidence 99998764210 0 0 01247899999999 99998877643211000 024667777
Q ss_pred HhcCCC
Q 024021 236 LQPMGF 241 (274)
Q Consensus 236 l~~~Gf 241 (274)
+-+.+.
T Consensus 376 Lle~~~ 381 (542)
T 3lkd_A 376 LLEEGA 381 (542)
T ss_dssp HHHTTC
T ss_pred HHhCCc
Confidence 777654
No 278
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.80 E-value=5.2e-08 Score=81.49 Aligned_cols=107 Identities=15% Similarity=0.143 Sum_probs=81.7
Q ss_pred CCCCeEEEEcCCcchhHHHhhC-C-CCeEEEEeCChHHHHHHHHHhhcC--C--CCcceEEEEcccCCCC--CCCCeeEE
Q 024021 107 LPKGRALVPGCGTGYDVVAMAS-P-ERYVVGLEISDIAIKKAEELSSSL--P--NAKFVSFLKADFFTWC--PTELFDLI 178 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~-~-~~~v~~vD~~~~~~~~a~~~~~~~--~--~~~~~~~~~~d~~~~~--~~~~~D~v 178 (274)
..+.+||-||.|.|..+..+++ + ..+|+.+|+++.+++.+++.++.. + ..++++++.+|..... ..++||+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 4468999999999999999987 3 459999999999999999987531 1 2478999999999843 34689999
Q ss_pred EecccccccChh--HHHHHHHHHHhcccCCcEEEEEE
Q 024021 179 FDYTFFCAIEPE--MRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 179 ~~~~~~~~~~~~--~~~~~l~~~~~~L~pgG~~~~~~ 213 (274)
+....=..-+.. ....+++.+.+.|+|||+++...
T Consensus 162 i~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEE
T ss_pred EEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEec
Confidence 975331111111 12467899999999999999865
No 279
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.78 E-value=1.9e-08 Score=82.84 Aligned_cols=85 Identities=7% Similarity=0.041 Sum_probs=62.3
Q ss_pred HHHHHHHhcCC-CCCCeEEEEcCCcchhHHHhhCCC-CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCC
Q 024021 96 PIIVHLHQSGA-LPKGRALVPGCGTGYDVVAMASPE-RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTE 173 (274)
Q Consensus 96 ~~~~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 173 (274)
..+..++.... .++.+|||+|||+|.++..+++.+ .+|+++|+++.+++.++++ . ..+++++.+|+.+.....
T Consensus 18 ~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~-~----~~~v~~i~~D~~~~~~~~ 92 (249)
T 3ftd_A 18 GVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI-G----DERLEVINEDASKFPFCS 92 (249)
T ss_dssp HHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS-C----CTTEEEECSCTTTCCGGG
T ss_pred HHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc-c----CCCeEEEEcchhhCChhH
Confidence 33445555443 356799999999999999999975 7999999999999999877 2 257999999998843222
Q ss_pred --CeeEEEeccccc
Q 024021 174 --LFDLIFDYTFFC 185 (274)
Q Consensus 174 --~~D~v~~~~~~~ 185 (274)
....|+++..+.
T Consensus 93 ~~~~~~vv~NlPy~ 106 (249)
T 3ftd_A 93 LGKELKVVGNLPYN 106 (249)
T ss_dssp SCSSEEEEEECCTT
T ss_pred ccCCcEEEEECchh
Confidence 122555555543
No 280
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.73 E-value=1.3e-08 Score=75.34 Aligned_cols=98 Identities=13% Similarity=0.003 Sum_probs=68.0
Q ss_pred HHHHHHhcCCCCCCeEEEEcCCcc-hhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCC--
Q 024021 97 IIVHLHQSGALPKGRALVPGCGTG-YDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPT-- 172 (274)
Q Consensus 97 ~~~~~~~~~~~~~~~vLDiG~G~G-~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-- 172 (274)
.+..++.....++.+|||+|||.| ..+..|++ .|..|+++|+++.+++ ++..|++++...
T Consensus 24 ~LaeYI~~~~~~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~----------------~v~dDiF~P~~~~Y 87 (153)
T 2k4m_A 24 DLAVYIIRCSGPGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG----------------IVRDDITSPRMEIY 87 (153)
T ss_dssp HHHHHHHHHSCSSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT----------------EECCCSSSCCHHHH
T ss_pred HHHHHHHhcCCCCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc----------------eEEccCCCCccccc
Confidence 355555544455689999999999 69999997 9999999999987544 888999986543
Q ss_pred CCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCC
Q 024021 173 ELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPIS 217 (274)
Q Consensus 173 ~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~ 217 (274)
..||+|++...-. +++..+-++.+.+ |.-+++...+..
T Consensus 88 ~~~DLIYsirPP~-----El~~~i~~lA~~v--~adliI~pL~~E 125 (153)
T 2k4m_A 88 RGAALIYSIRPPA-----EIHSSLMRVADAV--GARLIIKPLTGE 125 (153)
T ss_dssp TTEEEEEEESCCT-----TTHHHHHHHHHHH--TCEEEEECBTTB
T ss_pred CCcCEEEEcCCCH-----HHHHHHHHHHHHc--CCCEEEEcCCCC
Confidence 4899998755432 2233344444433 455666655443
No 281
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.72 E-value=1.6e-08 Score=84.60 Aligned_cols=67 Identities=15% Similarity=0.103 Sum_probs=54.3
Q ss_pred HHHHHhcC-CCCCCeEEEEcCCcchhHHHhhCCCCe----EEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC
Q 024021 98 IVHLHQSG-ALPKGRALVPGCGTGYDVVAMASPERY----VVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW 169 (274)
Q Consensus 98 ~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~~----v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 169 (274)
+..++... ..++.+|||||||+|.++..+++.+.. |+++|+++.+++.++++. .++++++.+|+.+.
T Consensus 31 ~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-----~~~v~~i~~D~~~~ 102 (279)
T 3uzu_A 31 IDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-----GELLELHAGDALTF 102 (279)
T ss_dssp HHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-----GGGEEEEESCGGGC
T ss_pred HHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-----CCCcEEEECChhcC
Confidence 34444433 345679999999999999999886665 999999999999999983 25799999999874
No 282
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.70 E-value=4.8e-09 Score=86.62 Aligned_cols=77 Identities=16% Similarity=0.068 Sum_probs=60.5
Q ss_pred CeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhc-------CC-CCcceEEEEcccCCCCC--CCCeeEEE
Q 024021 110 GRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSS-------LP-NAKFVSFLKADFFTWCP--TELFDLIF 179 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~-------~~-~~~~~~~~~~d~~~~~~--~~~~D~v~ 179 (274)
.+|||+|||+|..+..++..|++|+++|.++.++..+++++.. ++ ...+++++.+|..+..+ .++||+|+
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fDvV~ 169 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVVY 169 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCSEEE
T ss_pred CEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCCEEE
Confidence 7999999999999999998888999999999876666655431 11 22479999999877322 24799999
Q ss_pred ecccccc
Q 024021 180 DYTFFCA 186 (274)
Q Consensus 180 ~~~~~~~ 186 (274)
+...+..
T Consensus 170 lDP~y~~ 176 (258)
T 2oyr_A 170 LDPMFPH 176 (258)
T ss_dssp ECCCCCC
T ss_pred EcCCCCC
Confidence 9988765
No 283
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.64 E-value=2.2e-08 Score=82.60 Aligned_cols=74 Identities=11% Similarity=-0.029 Sum_probs=57.7
Q ss_pred CCCCeEEEEcCCcchhHHHhhCCCCe--EEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCC------CCeeEE
Q 024021 107 LPKGRALVPGCGTGYDVVAMASPERY--VVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPT------ELFDLI 178 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~~~~~--v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~------~~~D~v 178 (274)
.++.+|||||||+|.++. +.+ +.+ |+++|+++.+++.++++.... ++++++.+|+.+.... +..|.|
T Consensus 20 ~~~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~~~~~~a~~~~~~~---~~v~~i~~D~~~~~~~~~~~~~~~~~~v 94 (252)
T 1qyr_A 20 QKGQAMVEIGPGLAALTE-PVG-ERLDQLTVIELDRDLAARLQTHPFLG---PKLTIYQQDAMTFNFGELAEKMGQPLRV 94 (252)
T ss_dssp CTTCCEEEECCTTTTTHH-HHH-TTCSCEEEECCCHHHHHHHHTCTTTG---GGEEEECSCGGGCCHHHHHHHHTSCEEE
T ss_pred CCcCEEEEECCCCcHHHH-hhh-CCCCeEEEEECCHHHHHHHHHHhccC---CceEEEECchhhCCHHHhhcccCCceEE
Confidence 455799999999999999 654 566 999999999999999887543 4799999999874221 234677
Q ss_pred Eeccccc
Q 024021 179 FDYTFFC 185 (274)
Q Consensus 179 ~~~~~~~ 185 (274)
+++..+.
T Consensus 95 vsNlPY~ 101 (252)
T 1qyr_A 95 FGNLPYN 101 (252)
T ss_dssp EEECCTT
T ss_pred EECCCCC
Confidence 7776654
No 284
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.63 E-value=9.9e-08 Score=78.38 Aligned_cols=142 Identities=18% Similarity=0.132 Sum_probs=85.3
Q ss_pred cHHHHHHHhcCC-CCCCeEEEEcCCcchhHHHhhCC-CC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CC
Q 024021 95 APIIVHLHQSGA-LPKGRALVPGCGTGYDVVAMASP-ER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WC 170 (274)
Q Consensus 95 ~~~~~~~~~~~~-~~~~~vLDiG~G~G~~~~~l~~~-~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~ 170 (274)
...+.++.+... .++.+|||+|||+|.++..+++. +. .++++|+.-.....+... ... ..++..+..++.. ..
T Consensus 60 A~KL~ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~-~~~--g~~ii~~~~~~dv~~l 136 (277)
T 3evf_A 60 TAKLRWFHERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNV-QSL--GWNIITFKDKTDIHRL 136 (277)
T ss_dssp HHHHHHHHHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCC-CBT--TGGGEEEECSCCTTTS
T ss_pred HHHHHHHHHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccccccc-CcC--CCCeEEEeccceehhc
Confidence 444555555543 34579999999999999988763 44 788888874320000000 000 1134445555432 34
Q ss_pred CCCCeeEEEeccccc----ccChhHHHHHHHHHHhcccCC-cEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEE
Q 024021 171 PTELFDLIFDYTFFC----AIEPEMRAAWAQKIKDFLKPD-GELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAIS 245 (274)
Q Consensus 171 ~~~~~D~v~~~~~~~----~~~~~~~~~~l~~~~~~L~pg-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 245 (274)
+.++||+|++..... ..+....-.+++.+.++|+|| |.+++-.|.+. .....++.+.|+.. |..+.
T Consensus 137 ~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~py--------g~~~~~l~~~lk~~-F~~V~ 207 (277)
T 3evf_A 137 EPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAPY--------MPDVLEKLELLQRR-FGGTV 207 (277)
T ss_dssp CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTT--------SHHHHHHHHHHHHH-HCCEE
T ss_pred CCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCC--------CccHHHHHHHHHHh-cCCEE
Confidence 457899999987665 121111123478889999999 99999876532 11345666666664 66665
Q ss_pred Eee
Q 024021 246 IVD 248 (274)
Q Consensus 246 ~~~ 248 (274)
+..
T Consensus 208 ~~K 210 (277)
T 3evf_A 208 IRN 210 (277)
T ss_dssp ECC
T ss_pred EEe
Confidence 543
No 285
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.62 E-value=2.4e-07 Score=86.68 Aligned_cols=137 Identities=10% Similarity=0.066 Sum_probs=88.6
Q ss_pred CCCeEEEEcCCcchhHHHhhCC-----CCeEEEEeCChHHHHHH--HHHhhcCCCC---cceEEEEcccCC--CCCCCCe
Q 024021 108 PKGRALVPGCGTGYDVVAMASP-----ERYVVGLEISDIAIKKA--EELSSSLPNA---KFVSFLKADFFT--WCPTELF 175 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~-----~~~v~~vD~~~~~~~~a--~~~~~~~~~~---~~~~~~~~d~~~--~~~~~~~ 175 (274)
++.+|||+|||+|.++..+++. ..+++|+|+++.++..| +.+...+... ....+...|+.. .....+|
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kF 400 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANV 400 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTE
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCC
Confidence 4679999999999999988762 24799999999999999 5554432211 223556666665 2234689
Q ss_pred eEEEecccccc-cC-hh-------------------------HHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccC
Q 024021 176 DLIFDYTFFCA-IE-PE-------------------------MRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVS 228 (274)
Q Consensus 176 D~v~~~~~~~~-~~-~~-------------------------~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~ 228 (274)
|+|+++.++.. .. +. ....++.++.+.|++||++.++....--...+ ..
T Consensus 401 DVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~Lf~sg----~~ 476 (878)
T 3s1s_A 401 SVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQYLTAQG----NE 476 (878)
T ss_dssp EEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHHHHCCS----HH
T ss_pred CEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHHhccCC----hH
Confidence 99999998843 11 11 12346788999999999988877432110000 01
Q ss_pred HHHHHHHHhcCCCcEEEEeec
Q 024021 229 VSDYEEVLQPMGFQAISIVDN 249 (274)
Q Consensus 229 ~~~~~~~l~~~Gf~~~~~~~~ 249 (274)
...+++.+.+. +.+..+...
T Consensus 477 ~kkLRk~LLe~-~~I~aIIdL 496 (878)
T 3s1s_A 477 SKAFREFLVGN-FGLEHIFLY 496 (878)
T ss_dssp HHHHHHHHTTT-TCEEEEEEC
T ss_pred HHHHHHHHHhC-CCeEEEEEC
Confidence 45677776654 444444443
No 286
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.46 E-value=3.7e-07 Score=78.74 Aligned_cols=131 Identities=18% Similarity=0.182 Sum_probs=91.2
Q ss_pred CCCeEEEEcCCcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCC-------CCcceEEEEcccCCCC-----CCCC
Q 024021 108 PKGRALVPGCGTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLP-------NAKFVSFLKADFFTWC-----PTEL 174 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~-------~~~~~~~~~~d~~~~~-----~~~~ 174 (274)
++++||=||.|.|..+..+++ +..+|+.+|+++.+++.+++.++... ..++++++.+|..... ..++
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~ 284 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 284 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCc
Confidence 457999999999999999887 55689999999999999999875421 1246899999987632 3467
Q ss_pred eeEEEeccccc---c----cCh-hHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEE
Q 024021 175 FDLIFDYTFFC---A----IEP-EMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISI 246 (274)
Q Consensus 175 ~D~v~~~~~~~---~----~~~-~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 246 (274)
||+|+....-. . ... -....+++.+.+.|+|||+++.-.-.. .+.-....+.+.+++. |..+..
T Consensus 285 yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~-------~~~~~~~~i~~tl~~v-F~~v~~ 356 (381)
T 3c6k_A 285 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCV-------NLTEALSLYEEQLGRL-YCPVEF 356 (381)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEET-------TCHHHHHHHHHHHTTS-SSCEEE
T ss_pred eeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecCCC-------cchhHHHHHHHHHHHh-CCcceE
Confidence 99999753211 0 111 123578899999999999988754211 1111345677778776 444443
No 287
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.44 E-value=3.9e-07 Score=74.99 Aligned_cols=141 Identities=16% Similarity=0.062 Sum_probs=84.6
Q ss_pred cHHHHHHHhcC-CCCCCeEEEEcCCcchhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc--ccCCC
Q 024021 95 APIIVHLHQSG-ALPKGRALVPGCGTGYDVVAMAS-PER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA--DFFTW 169 (274)
Q Consensus 95 ~~~~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~-~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~--d~~~~ 169 (274)
...+.++.+.. ..++.+|||+|||+|.++.++++ .+. .++|+|+...+...+... ... ..++..... |+. .
T Consensus 76 AfKL~ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~~~--g~~ii~~~~~~dv~-~ 151 (282)
T 3gcz_A 76 SAKLRWMEERGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-TTL--GWNLIRFKDKTDVF-N 151 (282)
T ss_dssp HHHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-CBT--TGGGEEEECSCCGG-G
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-ccC--CCceEEeeCCcchh-h
Confidence 44455555544 34557999999999999998875 344 789999975422111100 001 122333332 333 3
Q ss_pred CCCCCeeEEEeccccc----ccChhHHHHHHHHHHhcccCC--cEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcE
Q 024021 170 CPTELFDLIFDYTFFC----AIEPEMRAAWAQKIKDFLKPD--GELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQA 243 (274)
Q Consensus 170 ~~~~~~D~v~~~~~~~----~~~~~~~~~~l~~~~~~L~pg--G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 243 (274)
.+..++|+|+|..... ..+....-.+++-+.++|+|| |.|++-.|.+. .....++.+.|+.. |..
T Consensus 152 l~~~~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~py--------g~~~~~l~~~lk~~-F~~ 222 (282)
T 3gcz_A 152 MEVIPGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCPY--------TPLIMEELSRLQLK-HGG 222 (282)
T ss_dssp SCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCCC--------SHHHHHHHHHHHHH-HCC
T ss_pred cCCCCcCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecCC--------CccHHHHHHHHHHh-cCC
Confidence 3457899999987766 121111123577778999999 99999886531 11345666666664 666
Q ss_pred EEEee
Q 024021 244 ISIVD 248 (274)
Q Consensus 244 ~~~~~ 248 (274)
+.+..
T Consensus 223 V~~~K 227 (282)
T 3gcz_A 223 GLVRV 227 (282)
T ss_dssp EEECC
T ss_pred EEEEc
Confidence 65543
No 288
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.44 E-value=5.5e-07 Score=75.11 Aligned_cols=125 Identities=12% Similarity=0.039 Sum_probs=90.1
Q ss_pred CCCCeEEEEcCCcchhHHHhhC-------CCCeEEEEeCCh--------------------------HHHHHHHHHhhcC
Q 024021 107 LPKGRALVPGCGTGYDVVAMAS-------PERYVVGLEISD--------------------------IAIKKAEELSSSL 153 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~-------~~~~v~~vD~~~--------------------------~~~~~a~~~~~~~ 153 (274)
..++.|||+|+..|..+..++. ++.+++++|... ..++.+++++...
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 3467999999999999987764 267899999642 1367788898888
Q ss_pred CC-CcceEEEEcccCCC---CCCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCH
Q 024021 154 PN-AKFVSFLKADFFTW---CPTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSV 229 (274)
Q Consensus 154 ~~-~~~~~~~~~d~~~~---~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~ 229 (274)
++ .++++++.+|+.+. .+.++||+|+.-.-.+ .....+++.+...|+|||++++-++.. +.-..
T Consensus 185 gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~y----~~~~~~Le~~~p~L~pGGiIv~DD~~~--------~~G~~ 252 (282)
T 2wk1_A 185 DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDLY----ESTWDTLTNLYPKVSVGGYVIVDDYMM--------CPPCK 252 (282)
T ss_dssp TCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCSH----HHHHHHHHHHGGGEEEEEEEEESSCTT--------CHHHH
T ss_pred CCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCcc----ccHHHHHHHHHhhcCCCEEEEEcCCCC--------CHHHH
Confidence 87 37899999999773 2346899999654321 234578899999999999988865411 11124
Q ss_pred HHHHHHHhcCCCcE
Q 024021 230 SDYEEVLQPMGFQA 243 (274)
Q Consensus 230 ~~~~~~l~~~Gf~~ 243 (274)
.-+.+.++..|+..
T Consensus 253 ~Av~Ef~~~~~i~~ 266 (282)
T 2wk1_A 253 DAVDEYRAKFDIAD 266 (282)
T ss_dssp HHHHHHHHHTTCCS
T ss_pred HHHHHHHHhcCCce
Confidence 56666777777554
No 289
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.38 E-value=2e-06 Score=71.07 Aligned_cols=81 Identities=16% Similarity=0.115 Sum_probs=63.8
Q ss_pred cHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-----
Q 024021 95 APIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW----- 169 (274)
Q Consensus 95 ~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~----- 169 (274)
...+.+.+. ..++..++|++||.|..+..+++.+.+|+|+|.++.+++.|++ +.. ++++++++|+.+.
T Consensus 11 l~e~le~L~--~~~gg~~VD~T~G~GGHS~~il~~~g~VigiD~Dp~Ai~~A~~-L~~----~rv~lv~~~f~~l~~~L~ 83 (285)
T 1wg8_A 11 YQEALDLLA--VRPGGVYVDATLGGAGHARGILERGGRVIGLDQDPEAVARAKG-LHL----PGLTVVQGNFRHLKRHLA 83 (285)
T ss_dssp HHHHHHHHT--CCTTCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHH-TCC----TTEEEEESCGGGHHHHHH
T ss_pred HHHHHHhhC--CCCCCEEEEeCCCCcHHHHHHHHCCCEEEEEeCCHHHHHHHHh-hcc----CCEEEEECCcchHHHHHH
Confidence 333444443 3467899999999999999998878899999999999999998 643 4799999999873
Q ss_pred -CCCCCeeEEEecc
Q 024021 170 -CPTELFDLIFDYT 182 (274)
Q Consensus 170 -~~~~~~D~v~~~~ 182 (274)
...+++|.|++..
T Consensus 84 ~~g~~~vDgIL~DL 97 (285)
T 1wg8_A 84 ALGVERVDGILADL 97 (285)
T ss_dssp HTTCSCEEEEEEEC
T ss_pred HcCCCCcCEEEeCC
Confidence 1225799999743
No 290
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.37 E-value=2.5e-06 Score=73.30 Aligned_cols=125 Identities=14% Similarity=0.088 Sum_probs=80.5
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-CCCeeEEEecccc
Q 024021 106 ALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP-TELFDLIFDYTFF 184 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~~ 184 (274)
..++.+|||+||++|.++..+++.|.+|++||..+- -... .. .++++++.+|.+...+ ..+||+|+|..+.
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~l-~~~l----~~---~~~V~~~~~d~~~~~~~~~~~D~vvsDm~~ 280 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGPM-AQSL----MD---TGQVTWLREDGFKFRPTRSNISWMVCDMVE 280 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTTCEEEEECSSCC-CHHH----HT---TTCEEEECSCTTTCCCCSSCEEEEEECCSS
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhhc-Chhh----cc---CCCeEEEeCccccccCCCCCcCEEEEcCCC
Confidence 456789999999999999999999999999998642 1111 11 1579999999998544 4579999997765
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcE
Q 024021 185 CAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQA 243 (274)
Q Consensus 185 ~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 243 (274)
. +......+..+......++.++........... ........+.+.++.+||..
T Consensus 281 ~---p~~~~~l~~~wl~~~~~~~aI~~lKL~mk~~~~--~l~~~~~~i~~~l~~~g~~~ 334 (375)
T 4auk_A 281 K---PAKVAALMAQWLVNGWCRETIFNLKLPMKKRYE--EVSHNLAYIQAQLDEHGINA 334 (375)
T ss_dssp C---HHHHHHHHHHHHHTTSCSEEEEEEECCSSSHHH--HHHHHHHHHHHHHHHTTCCE
T ss_pred C---hHHhHHHHHHHHhccccceEEEEEEecccchHH--HHHHHHHHHHHHHHhcCcch
Confidence 3 222333444444444444666665544321100 00012456677888888864
No 291
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.34 E-value=3e-06 Score=73.10 Aligned_cols=126 Identities=13% Similarity=0.093 Sum_probs=89.5
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCCC--CeEEEEeCChHHHHHHHHHhhcCCC-----CcceEEEEcccCCC--CCCCCee
Q 024021 106 ALPKGRALVPGCGTGYDVVAMASPE--RYVVGLEISDIAIKKAEELSSSLPN-----AKFVSFLKADFFTW--CPTELFD 176 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~~~--~~~~~~D 176 (274)
..++.+|||+++|.|.=+..++..+ ..++++|+++..+...++++...+. ..++.+...|.... ...+.||
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD 225 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYD 225 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEE
T ss_pred CCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCC
Confidence 5667899999999999998888743 3799999999999999888765432 24688888888763 3457899
Q ss_pred EEEecccccc---------------cChh-------HHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHH
Q 024021 177 LIFDYTFFCA---------------IEPE-------MRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEE 234 (274)
Q Consensus 177 ~v~~~~~~~~---------------~~~~-------~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (274)
.|++...-.. .... ....++....++|||||+++..+.+.... -+.+.+..
T Consensus 226 ~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~-------ENE~vV~~ 298 (359)
T 4fzv_A 226 RVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHL-------QNEYVVQG 298 (359)
T ss_dssp EEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTT-------TTHHHHHH
T ss_pred EEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchh-------hCHHHHHH
Confidence 9996432110 1111 12478889999999999999887665322 13455555
Q ss_pred HHhc
Q 024021 235 VLQP 238 (274)
Q Consensus 235 ~l~~ 238 (274)
.++.
T Consensus 299 ~L~~ 302 (359)
T 4fzv_A 299 AIEL 302 (359)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5554
No 292
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.26 E-value=4.9e-06 Score=75.76 Aligned_cols=122 Identities=18% Similarity=0.166 Sum_probs=83.9
Q ss_pred CCccHHHHHHHhcC-CCCCCeEEEEcCCcchhHHHhhC----C-----------CCeEEEEeCChHHHHHHHHHhhcCCC
Q 024021 92 GQPAPIIVHLHQSG-ALPKGRALVPGCGTGYDVVAMAS----P-----------ERYVVGLEISDIAIKKAEELSSSLPN 155 (274)
Q Consensus 92 ~~~~~~~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~----~-----------~~~v~~vD~~~~~~~~a~~~~~~~~~ 155 (274)
-+|...+.-++... ..++.+|+|.+||+|.++..+.+ . ...++|+|+++.+...|+-+....+.
T Consensus 200 yTP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~ 279 (530)
T 3ufb_A 200 YTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGL 279 (530)
T ss_dssp CCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTC
T ss_pred CCcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCC
Confidence 35555555454443 33456999999999999876643 1 24699999999999999988766554
Q ss_pred CcceEEEEcccCCC-----CCCCCeeEEEecccccccCh--------------hHHHHHHHHHHhccc-------CCcEE
Q 024021 156 AKFVSFLKADFFTW-----CPTELFDLIFDYTFFCAIEP--------------EMRAAWAQKIKDFLK-------PDGEL 209 (274)
Q Consensus 156 ~~~~~~~~~d~~~~-----~~~~~~D~v~~~~~~~~~~~--------------~~~~~~l~~~~~~L~-------pgG~~ 209 (274)
+...+..+|.... ....+||+|+++.++..-.. ..-..++..+.+.|+ +||++
T Consensus 280 -~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~ 358 (530)
T 3ufb_A 280 -EYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRA 358 (530)
T ss_dssp -SCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEE
T ss_pred -ccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceE
Confidence 2356777877642 12347999999999853211 111356777888776 79998
Q ss_pred EEEEc
Q 024021 210 ITLMF 214 (274)
Q Consensus 210 ~~~~~ 214 (274)
.++..
T Consensus 359 avVlP 363 (530)
T 3ufb_A 359 AVVVP 363 (530)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 87764
No 293
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.22 E-value=4.5e-06 Score=69.12 Aligned_cols=140 Identities=21% Similarity=0.159 Sum_probs=81.6
Q ss_pred HHHHHHHhcC-CCCCCeEEEEcCCcchhHHHhhCC-CC-eEEEEeCChHHHHHHHHHhhcCCCCcce-EEEEc-ccCCCC
Q 024021 96 PIIVHLHQSG-ALPKGRALVPGCGTGYDVVAMASP-ER-YVVGLEISDIAIKKAEELSSSLPNAKFV-SFLKA-DFFTWC 170 (274)
Q Consensus 96 ~~~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~-~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~~-d~~~~~ 170 (274)
..+.++.+.. ..++.+|||+||++|.++..+++. +. .|+|+|+.......+.. ... ...++ .+... |+.. .
T Consensus 68 ~KL~ei~ek~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~~--~~~~iv~~~~~~di~~-l 143 (300)
T 3eld_A 68 AKIRWLHERGYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQT--LGWNIVKFKDKSNVFT-M 143 (300)
T ss_dssp HHHHHHHHHTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCB--TTGGGEEEECSCCTTT-S
T ss_pred HHHHHHHHhCCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-ccc--cCCceEEeecCceeee-c
Confidence 3344444433 345679999999999999999973 44 78999996532100000 000 01122 23222 3332 3
Q ss_pred CCCCeeEEEeccccc----ccChhHHHHHHHHHHhcccCC-cEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEE
Q 024021 171 PTELFDLIFDYTFFC----AIEPEMRAAWAQKIKDFLKPD-GELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAIS 245 (274)
Q Consensus 171 ~~~~~D~v~~~~~~~----~~~~~~~~~~l~~~~~~L~pg-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 245 (274)
..+++|+|++..... ..+......+++-+.++|+|| |.|++-.|.+. .....++.+.|+.. |..+.
T Consensus 144 ~~~~~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~y--------G~~~~~ll~~lk~~-F~~V~ 214 (300)
T 3eld_A 144 PTEPSDTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAPY--------HPDVIEKLERLQLR-FGGGI 214 (300)
T ss_dssp CCCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESSTT--------SHHHHHHHHHHHHH-HCCEE
T ss_pred CCCCcCEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecccc--------CccHHHHHHHHHHh-CCcEE
Confidence 346899999976655 111111124477778999999 99999887532 11345566666654 66555
Q ss_pred Eee
Q 024021 246 IVD 248 (274)
Q Consensus 246 ~~~ 248 (274)
+..
T Consensus 215 ~~K 217 (300)
T 3eld_A 215 VRV 217 (300)
T ss_dssp ECC
T ss_pred EEe
Confidence 543
No 294
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=98.22 E-value=9.2e-06 Score=68.13 Aligned_cols=126 Identities=19% Similarity=0.170 Sum_probs=80.8
Q ss_pred CCeEEEEcCCcchhHHHhh------CCCC--eEEEEeCCh------------HHHHHHHHHhhc-CCCCcceEEEEcccC
Q 024021 109 KGRALVPGCGTGYDVVAMA------SPER--YVVGLEISD------------IAIKKAEELSSS-LPNAKFVSFLKADFF 167 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~------~~~~--~v~~vD~~~------------~~~~~a~~~~~~-~~~~~~~~~~~~d~~ 167 (274)
.-+|||+|-|+|.+..... .+.. +++.+|..+ +.........+. .+..-.+++..+|+.
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~ 176 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDAR 176 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHH
Confidence 3589999999999864322 1333 567777521 112222222221 111124577888987
Q ss_pred CC---CCCCCeeEEEecccccccChhHH-HHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcE
Q 024021 168 TW---CPTELFDLIFDYTFFCAIEPEMR-AAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQA 243 (274)
Q Consensus 168 ~~---~~~~~~D~v~~~~~~~~~~~~~~-~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 243 (274)
+. .....||+|+..+.-..-.++.+ ..+++.++++++|||.+...+ ....++..|+++||.+
T Consensus 177 ~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laTYt--------------aag~VRR~L~~aGF~V 242 (308)
T 3vyw_A 177 KRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVSYS--------------SSLSVRKSLLTLGFKV 242 (308)
T ss_dssp HHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEESC--------------CCHHHHHHHHHTTCEE
T ss_pred HHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEEEe--------------CcHHHHHHHHHCCCEE
Confidence 62 23347999997654322233322 578999999999999987644 4678999999999999
Q ss_pred EEEee
Q 024021 244 ISIVD 248 (274)
Q Consensus 244 ~~~~~ 248 (274)
.++.-
T Consensus 243 ~k~~G 247 (308)
T 3vyw_A 243 GSSRE 247 (308)
T ss_dssp EEEEC
T ss_pred EecCC
Confidence 87654
No 295
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.12 E-value=4.5e-06 Score=67.62 Aligned_cols=111 Identities=18% Similarity=0.129 Sum_probs=67.1
Q ss_pred HHHHHhcC-CCCCCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhcCCCCcc---eEEEEc-ccCCCC
Q 024021 98 IVHLHQSG-ALPKGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSSLPNAKF---VSFLKA-DFFTWC 170 (274)
Q Consensus 98 ~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~---~~~~~~-d~~~~~ 170 (274)
+.++-+.. ..++.+|||+||+.|.|+.++++. ...|.|.++.... ...+....... +.|.++ |+++..
T Consensus 62 L~EIdeK~likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-----~~~P~~~~~~Gv~~i~~~~G~Df~~~~ 136 (269)
T 2px2_A 62 LRWLVERRFVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-----HEEPMLMQSYGWNIVTMKSGVDVFYKP 136 (269)
T ss_dssp HHHHHHTTSCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-----SCCCCCCCSTTGGGEEEECSCCGGGSC
T ss_pred HHHHHHcCCCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-----ccCCCcccCCCceEEEeeccCCccCCC
Confidence 44444333 456789999999999999999884 2244555443220 00011100012 355557 998743
Q ss_pred CCCCeeEEEecccccccCh---hH--HHHHHHHHHhcccCCc-EEEEEEcc
Q 024021 171 PTELFDLIFDYTFFCAIEP---EM--RAAWAQKIKDFLKPDG-ELITLMFP 215 (274)
Q Consensus 171 ~~~~~D~v~~~~~~~~~~~---~~--~~~~l~~~~~~L~pgG-~~~~~~~~ 215 (274)
..++|+|+|...-. -.. +. .-.+++-+.++|+||| -|++-.|.
T Consensus 137 -~~~~DvVLSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 137 -SEISDTLLCDIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp -CCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred -CCCCCEEEeCCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 45799999976543 211 11 1125777779999999 88887765
No 296
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.09 E-value=6e-05 Score=60.21 Aligned_cols=118 Identities=17% Similarity=0.181 Sum_probs=76.3
Q ss_pred HHHHHHHhcC-CCCCCeEEEEcCCcchhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc-ccCCCCC
Q 024021 96 PIIVHLHQSG-ALPKGRALVPGCGTGYDVVAMAS-PER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA-DFFTWCP 171 (274)
Q Consensus 96 ~~~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~-~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~-d~~~~~~ 171 (274)
..+..+.+.. ..++.+|||+||++|.++.+++. .+. .|+|+|+...-.+..+ ..+..++ +.++|..+ |++...+
T Consensus 65 ~KL~ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~-~~~s~gw-n~v~fk~gvDv~~~~~ 142 (267)
T 3p8z_A 65 AKLQWFVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPV-PMSTYGW-NIVKLMSGKDVFYLPP 142 (267)
T ss_dssp HHHHHHHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCC-CCCCTTT-TSEEEECSCCGGGCCC
T ss_pred HHHHHHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcc-hhhhcCc-CceEEEeccceeecCC
Confidence 3344544443 34567999999999999997776 455 7999999654221000 0112222 46999999 9866444
Q ss_pred CCCeeEEEecccccccCh----hHHHHHHHHHHhcccCCcEEEEEEccCC
Q 024021 172 TELFDLIFDYTFFCAIEP----EMRAAWAQKIKDFLKPDGELITLMFPIS 217 (274)
Q Consensus 172 ~~~~D~v~~~~~~~~~~~----~~~~~~l~~~~~~L~pgG~~~~~~~~~~ 217 (274)
.++|+|+|...-..-.+ ...-.+|+-+.++|++ |-+++-.+.+.
T Consensus 143 -~~~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py 190 (267)
T 3p8z_A 143 -EKCDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPY 190 (267)
T ss_dssp -CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCC
T ss_pred -ccccEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCC
Confidence 67999999755432221 1123477888899998 78887766553
No 297
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.09 E-value=6.4e-06 Score=69.48 Aligned_cols=61 Identities=23% Similarity=0.178 Sum_probs=52.2
Q ss_pred CccHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcC
Q 024021 93 QPAPIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSL 153 (274)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~ 153 (274)
.+...+..++.....++..|||++||+|..+..+++.|.+++|+|+++.+++.|++++...
T Consensus 220 ~p~~l~~~~i~~~~~~~~~vlD~f~GsGt~~~~a~~~g~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 220 FPLELAERLVRMFSFVGDVVLDPFAGTGTTLIAAARWGRRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp SCHHHHHHHHHHHCCTTCEEEETTCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHHh
Confidence 3456666777665667889999999999999999999999999999999999999988653
No 298
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.03 E-value=5.2e-05 Score=62.59 Aligned_cols=118 Identities=18% Similarity=0.156 Sum_probs=75.9
Q ss_pred cHHHHHHHhcC-CCCCCeEEEEcCCcchhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc-ccCCCC
Q 024021 95 APIIVHLHQSG-ALPKGRALVPGCGTGYDVVAMAS-PER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA-DFFTWC 170 (274)
Q Consensus 95 ~~~~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~-~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~-d~~~~~ 170 (274)
...+..+.+.. ..++.+|||+||++|.++.+++. .+. .|+|+|+...-.+..+ ..+..++ +-+.+..+ |+....
T Consensus 80 ~~KL~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~-~~~ql~w-~lV~~~~~~Dv~~l~ 157 (321)
T 3lkz_A 80 TAKLRWLVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQ-LVQSYGW-NIVTMKSGVDVFYRP 157 (321)
T ss_dssp HHHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCC-CCCBTTG-GGEEEECSCCTTSSC
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcc-hhhhcCC-cceEEEeccCHhhCC
Confidence 34455555543 34557999999999999997766 555 7999999654110000 0011111 23788887 887655
Q ss_pred CCCCeeEEEecccccccChh-----HHHHHHHHHHhcccCC-cEEEEEEccC
Q 024021 171 PTELFDLIFDYTFFCAIEPE-----MRAAWAQKIKDFLKPD-GELITLMFPI 216 (274)
Q Consensus 171 ~~~~~D~v~~~~~~~~~~~~-----~~~~~l~~~~~~L~pg-G~~~~~~~~~ 216 (274)
+ .++|+|+|.-. +.-+.. ..-.+|+-+.++|++| |-+++-.+.+
T Consensus 158 ~-~~~D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~p 207 (321)
T 3lkz_A 158 S-ECCDTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCP 207 (321)
T ss_dssp C-CCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred C-CCCCEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCC
Confidence 4 66999998655 332221 1134778888999999 8888877655
No 299
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=97.86 E-value=0.00032 Score=59.94 Aligned_cols=141 Identities=11% Similarity=0.155 Sum_probs=100.5
Q ss_pred HHHHHhcCCCCCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCC--------------------C
Q 024021 98 IVHLHQSGALPKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLP--------------------N 155 (274)
Q Consensus 98 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~--------------------~ 155 (274)
+.+++.. .+...|+.+|||.......+.. ++..++-+|+ |+.++.-++.+...+ .
T Consensus 89 v~~fl~~--~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~ 165 (334)
T 1rjd_A 89 ILEFLVA--NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLID 165 (334)
T ss_dssp HHHHHHH--CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEE
T ss_pred HHHHHHH--CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccC
Confidence 4444442 2347899999999999988876 4567888887 888877777655431 1
Q ss_pred CcceEEEEcccCCC---------C-CCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCC---C-C--
Q 024021 156 AKFVSFLKADFFTW---------C-PTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPIS---D-H-- 219 (274)
Q Consensus 156 ~~~~~~~~~d~~~~---------~-~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~---~-~-- 219 (274)
.++..++.+|+.+. . ......++++-+++.|++++....+++.+.+.. |+|.+++.+.-.. . .
T Consensus 166 ~~~~~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~~~~~~~fg 244 (334)
T 1rjd_A 166 QGRYKLAACDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGGSQPNDRFG 244 (334)
T ss_dssp CSSEEEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCCCSTTCCHH
T ss_pred CCceEEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCCCCCcchHH
Confidence 35789999999871 1 234678999999999999999999999999877 6777765554322 1 0
Q ss_pred --------C-CCCCc-----ccCHHHHHHHHhcCCCc
Q 024021 220 --------V-GGPPY-----KVSVSDYEEVLQPMGFQ 242 (274)
Q Consensus 220 --------~-~~~~~-----~~~~~~~~~~l~~~Gf~ 242 (274)
. .+.++ ..++++..+.|.++||.
T Consensus 245 ~~m~~~l~~~rg~~l~~~~~y~s~~~~~~rl~~~Gf~ 281 (334)
T 1rjd_A 245 AIMQSNLKESRNLEMPTLMTYNSKEKYASRWSAAPNV 281 (334)
T ss_dssp HHHHHHHHHHHCCCCTTTTTTCSHHHHHGGGTTSSEE
T ss_pred HHHHHHhhcccCCcccccccCCCHHHHHHHHHHCCCC
Confidence 0 11111 13788899999999997
No 300
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.75 E-value=0.00027 Score=58.33 Aligned_cols=126 Identities=17% Similarity=0.112 Sum_probs=81.6
Q ss_pred HHHHHhcC---CCCCCeEEEEcC------CcchhHH-HhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccC
Q 024021 98 IVHLHQSG---ALPKGRALVPGC------GTGYDVV-AMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFF 167 (274)
Q Consensus 98 ~~~~~~~~---~~~~~~vLDiG~------G~G~~~~-~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 167 (274)
+.+++... ...+++|||+|+ ..|.... .+...|..++++|+.+-. . +...++++|..
T Consensus 96 lcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS~VLr~~~p~g~~VVavDL~~~~---------s----da~~~IqGD~~ 162 (344)
T 3r24_A 96 LCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFV---------S----DADSTLIGDCA 162 (344)
T ss_dssp HHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCCB---------C----SSSEEEESCGG
T ss_pred HHHHhccccEeecCCCEEEeCCCCCCCCCCCcHHHHHHhCCCCcEEEEeeCcccc---------c----CCCeEEEcccc
Confidence 55566432 223589999996 6666432 233345799999997631 1 11255999987
Q ss_pred CCCCCCCeeEEEeccccc---ccC------hhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhc
Q 024021 168 TWCPTELFDLIFDYTFFC---AIE------PEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQP 238 (274)
Q Consensus 168 ~~~~~~~~D~v~~~~~~~---~~~------~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 238 (274)
......+||+|++-..-. +.+ ......+++-+.+.|+|||-|++-.|... ..+++.++.+
T Consensus 163 ~~~~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGs----------g~~~L~~lrk- 231 (344)
T 3r24_A 163 TVHTANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHS----------WNADLYKLMG- 231 (344)
T ss_dssp GEEESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSS----------CCHHHHHHHT-
T ss_pred ccccCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCC----------CHHHHHHHHh-
Confidence 755567899999864321 111 12356778888999999999999886553 2245555554
Q ss_pred CCCcEEEEee
Q 024021 239 MGFQAISIVD 248 (274)
Q Consensus 239 ~Gf~~~~~~~ 248 (274)
-|..++...
T Consensus 232 -~F~~VK~fK 240 (344)
T 3r24_A 232 -HFSWWTAFV 240 (344)
T ss_dssp -TEEEEEEEE
T ss_pred -hCCeEEEEC
Confidence 588777763
No 301
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=97.75 E-value=0.0016 Score=55.04 Aligned_cols=134 Identities=7% Similarity=-0.009 Sum_probs=99.2
Q ss_pred CeEEEEcCCcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCC--CCcceEEEEcccCCC---------CCCCCeeE
Q 024021 110 GRALVPGCGTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLP--NAKFVSFLKADFFTW---------CPTELFDL 177 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~~---------~~~~~~D~ 177 (274)
..|+++|||-=.....+.. .+.+++-+| .|..++..++.+...+ ...+..++.+|+.+. ......-+
T Consensus 104 ~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~~Pt~ 182 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPSARTA 182 (310)
T ss_dssp CEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTTSCEE
T ss_pred CeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCCCCEE
Confidence 5799999998777666664 357899999 4999999988886432 236789999999861 11234568
Q ss_pred EEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC---------------CCC-------CCccc--C-HHHH
Q 024021 178 IFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH---------------VGG-------PPYKV--S-VSDY 232 (274)
Q Consensus 178 v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~---------------~~~-------~~~~~--~-~~~~ 232 (274)
+++-++++|++++....+++.+...+.||+.+++........ ..| .++.. + .+++
T Consensus 183 ~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~ 262 (310)
T 2uyo_A 183 WLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPLHGDEWREQMQLRFRRVSDALGFEQAVDVQELIYHDENRAVV 262 (310)
T ss_dssp EEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCTTCSHHHHHHHHHHHHHHC-----------CCTTCCTTCCCH
T ss_pred EEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCCCCcchhHHHHHHHHHHHHHcCCcCCCCccccccCCCChHHH
Confidence 888899999999888999999999999999888866544211 112 12222 5 7889
Q ss_pred HHHHhcCCCcEE
Q 024021 233 EEVLQPMGFQAI 244 (274)
Q Consensus 233 ~~~l~~~Gf~~~ 244 (274)
.+.|.++||+.+
T Consensus 263 ~~~f~~~G~~~~ 274 (310)
T 2uyo_A 263 ADWLNRHGWRAT 274 (310)
T ss_dssp HHHHTTTTEEEE
T ss_pred HHHHHHCcCccc
Confidence 999999999887
No 302
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.75 E-value=5.5e-05 Score=62.43 Aligned_cols=63 Identities=16% Similarity=0.241 Sum_probs=52.5
Q ss_pred CCccHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCC
Q 024021 92 GQPAPIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLP 154 (274)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~ 154 (274)
..+...+..++.....++..|||..||+|..+..+.+.|.+++|+|+++..++.+++++...+
T Consensus 196 ~~p~~l~~~~i~~~~~~~~~vlD~f~GsGtt~~~a~~~gr~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 196 PKPRDLIERIIRASSNPNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp CCCHHHHHHHHHHHCCTTCEEEESSCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC--
T ss_pred CCCHHHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcc
Confidence 344566667776656678899999999999999999999999999999999999999986543
No 303
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.68 E-value=6.4e-05 Score=62.19 Aligned_cols=123 Identities=15% Similarity=0.059 Sum_probs=88.3
Q ss_pred CCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-----CCCCCCeeEEEecc
Q 024021 108 PKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-----WCPTELFDLIFDYT 182 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-----~~~~~~~D~v~~~~ 182 (274)
.+..+||+-+|+|.+++.+.+.+.+++.+|.++..+...++++... .+++++..|... ..+..+||+|+...
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS~~d~~vfvE~~~~a~~~L~~Nl~~~---~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDP 167 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHFN---KKVYVNHTDGVSKLNALLPPPEKRGLIFIDP 167 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSCTTSEEEEECCSHHHHHHHTTSCCTT---SCEEEECSCHHHHHHHHCSCTTSCEEEEECC
T ss_pred cCCCceeEeCCcHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHhCcC---CcEEEEeCcHHHHHHHhcCCCCCccEEEECC
Confidence 3567899999999999999987779999999999999999998652 579999999765 23445799999988
Q ss_pred cccccChhHHHHHHHHHHh--cccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcE
Q 024021 183 FFCAIEPEMRAAWAQKIKD--FLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQA 243 (274)
Q Consensus 183 ~~~~~~~~~~~~~l~~~~~--~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 243 (274)
.++.- +....+++.+.+ .+.|+|++++-- +... .-..+.+.+.+++.|...
T Consensus 168 PYe~k--~~~~~vl~~L~~~~~r~~~Gi~v~WY-Pi~~-------~~~~~~~~~~l~~~~~~~ 220 (283)
T 2oo3_A 168 SYERK--EEYKEIPYAIKNAYSKFSTGLYCVWY-PVVN-------KAWTEQFLRKMREISSKS 220 (283)
T ss_dssp CCCST--THHHHHHHHHHHHHHHCTTSEEEEEE-EESS-------HHHHHHHHHHHHHHCSSE
T ss_pred CCCCC--cHHHHHHHHHHHhCccCCCeEEEEEE-eccc-------hHHHHHHHHHHHhcCCCe
Confidence 88742 244555655555 456788776632 2111 013456666676666633
No 304
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.49 E-value=0.00024 Score=60.98 Aligned_cols=124 Identities=16% Similarity=0.058 Sum_probs=78.8
Q ss_pred CeEEEEcCCcchhHHHhhCCC--C-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCC----CCeeEEEecc
Q 024021 110 GRALVPGCGTGYDVVAMASPE--R-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPT----ELFDLIFDYT 182 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~~l~~~~--~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~----~~~D~v~~~~ 182 (274)
.+++|+.||.|.+...+...| + .++++|+++.+++..+.+.+ +..++.+|+.+.... ..+|+++...
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~------~~~~~~~Di~~~~~~~~~~~~~D~l~~gp 76 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP------HTQLLAKTIEGITLEEFDRLSFDMILMSP 76 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT------TSCEECSCGGGCCHHHHHHHCCSEEEECC
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc------ccccccCCHHHccHhHcCcCCcCEEEEcC
Confidence 589999999999999998877 3 69999999999999999974 245678888774321 2689999887
Q ss_pred cccccCh--------hHHHHHHH---HHHhccc--CCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEE
Q 024021 183 FFCAIEP--------EMRAAWAQ---KIKDFLK--PDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISI 246 (274)
Q Consensus 183 ~~~~~~~--------~~~~~~l~---~~~~~L~--pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 246 (274)
....++. +.+..++. ++.+.++ |. +++.+....-. ...+.+.+.+.|++.||.+...
T Consensus 77 PCq~fS~ag~~~g~~d~r~~l~~~~~~~i~~~~~~P~--~~~~ENV~~l~-----~~~~~~~i~~~l~~~GY~v~~~ 146 (343)
T 1g55_A 77 PCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPK--YILLENVKGFE-----VSSTRDLLIQTIENCGFQYQEF 146 (343)
T ss_dssp C------------------CHHHHHHHHGGGCSSCCS--EEEEEEETTGG-----GSHHHHHHHHHHHHTTEEEEEE
T ss_pred CCcchhhcCCcCCccCccchHHHHHHHHHHHhcCCCC--EEEEeCCcccc-----CHHHHHHHHHHHHHCCCeeEEE
Confidence 7444321 11111223 3444455 54 33333222100 0124578889999999987653
No 305
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.48 E-value=0.001 Score=57.79 Aligned_cols=123 Identities=12% Similarity=-0.053 Sum_probs=80.1
Q ss_pred CeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC---------CCCCeeEEE
Q 024021 110 GRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC---------PTELFDLIF 179 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---------~~~~~D~v~ 179 (274)
.+++|+.||.|.++..+...|+ .+.++|+++.+++..+.+.+ +..++.+|+.+.. ....+|+|+
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~~------~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ 76 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINFP------RSLHVQEDVSLLNAEIIKGFFKNDMPIDGII 76 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHCT------TSEEECCCGGGCCHHHHHHHHCSCCCCCEEE
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhCC------CCceEecChhhcCHHHHHhhcccCCCeeEEE
Confidence 5899999999999999988888 46799999999999888863 4667888887632 245799999
Q ss_pred ecccccccCh-------hHHHHHH---HHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcE
Q 024021 180 DYTFFCAIEP-------EMRAAWA---QKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQA 243 (274)
Q Consensus 180 ~~~~~~~~~~-------~~~~~~l---~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 243 (274)
....-..++. +.+..++ -++.+.++|. +++.+....-.. .......+.+. .|++.||.+
T Consensus 77 ggpPCQ~fS~ag~~~~~d~r~~L~~~~~~~v~~~~P~--~~v~ENV~gl~s--~~~~~~~~~i~-~l~~~GY~v 145 (376)
T 3g7u_A 77 GGPPCQGFSSIGKGNPDDSRNQLYMHFYRLVSELQPL--FFLAENVPGIMQ--EKYSGIRNKAF-NLVSGDYDI 145 (376)
T ss_dssp ECCCCCTTC-------CHHHHHHHHHHHHHHHHHCCS--EEEEEECTTTTC--GGGHHHHHHHH-HHHHTTEEE
T ss_pred ecCCCCCcccccCCCCCCchHHHHHHHHHHHHHhCCC--EEEEecchHhhc--cCcHHHHHHHH-HHHcCCCcc
Confidence 8766544421 1122222 2344446774 444443222110 00011245666 888999988
No 306
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.47 E-value=0.00079 Score=57.00 Aligned_cols=72 Identities=18% Similarity=0.099 Sum_probs=56.6
Q ss_pred CCCCCeEEEEcCCcchhHHHhhC---CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC---CC----CCCe
Q 024021 106 ALPKGRALVPGCGTGYDVVAMAS---PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW---CP----TELF 175 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~---~~----~~~~ 175 (274)
..++..++|..||.|..+..+++ +..+|+|+|.++.+++.++ ++ . .++++++.+++.+. .. .+++
T Consensus 55 i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL--~--~~Rv~lv~~nF~~l~~~L~~~g~~~~v 129 (347)
T 3tka_A 55 IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI--D--DPRFSIIHGPFSALGEYVAERDLIGKI 129 (347)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC--C--CTTEEEEESCGGGHHHHHHHTTCTTCE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh--c--CCcEEEEeCCHHHHHHHHHhcCCCCcc
Confidence 35678999999999999998887 3569999999999999994 43 1 36899999998772 11 1369
Q ss_pred eEEEecc
Q 024021 176 DLIFDYT 182 (274)
Q Consensus 176 D~v~~~~ 182 (274)
|.|+...
T Consensus 130 DgILfDL 136 (347)
T 3tka_A 130 DGILLDL 136 (347)
T ss_dssp EEEEEEC
T ss_pred cEEEECC
Confidence 9999743
No 307
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.28 E-value=8e-05 Score=78.95 Aligned_cols=133 Identities=16% Similarity=0.120 Sum_probs=66.3
Q ss_pred CCCCeEEEEcCCcchhHHHhhC---C----CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC--CCCCCeeE
Q 024021 107 LPKGRALVPGCGTGYDVVAMAS---P----ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW--CPTELFDL 177 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~---~----~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~D~ 177 (274)
.+..+|||+|.|+|..+..+.+ . -.+++..|+++...+.+++++... ++..-..|..++ .....||+
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~----di~~~~~d~~~~~~~~~~~ydl 1314 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL----HVTQGQWDPANPAPGSLGKADL 1314 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH----TEEEECCCSSCCCC-----CCE
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc----ccccccccccccccCCCCceeE
Confidence 3457999999999987654332 1 127899999988877777665431 133222233221 12456999
Q ss_pred EEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCC----CC--------CCCCcccCHHHHHHHHhcCCCcEEE
Q 024021 178 IFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISD----HV--------GGPPYKVSVSDYEEVLQPMGFQAIS 245 (274)
Q Consensus 178 v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~----~~--------~~~~~~~~~~~~~~~l~~~Gf~~~~ 245 (274)
|++..+++.. ......+.+++++|+|||++++.+..... .. .+.+ ..+.++|.++|+..||..+.
T Consensus 1315 via~~vl~~t--~~~~~~l~~~~~lL~p~G~l~~~e~~~~~~~g~~~~~~~~~~r~~~~-~~~~~~w~~~l~~~gf~~~~ 1391 (2512)
T 2vz8_A 1315 LVCNCALATL--GDPAVAVGNMAATLKEGGFLLLHTLLAGHPLGEMVGFLTSPEQGGRH-LLSQDQWESLFAGASLHLVA 1391 (2512)
T ss_dssp EEEECC----------------------CCEEEEEEC---------------------------CTTTTSSTTTTEEEEE
T ss_pred EEEccccccc--ccHHHHHHHHHHhcCCCcEEEEEeccccccccccccccccccccCCc-ccCHHHHHHHHHhCCCceee
Confidence 9999998754 23456789999999999998886532100 00 0011 24667888889999998876
Q ss_pred E
Q 024021 246 I 246 (274)
Q Consensus 246 ~ 246 (274)
.
T Consensus 1392 ~ 1392 (2512)
T 2vz8_A 1392 L 1392 (2512)
T ss_dssp E
T ss_pred e
Confidence 5
No 308
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.23 E-value=0.0023 Score=54.43 Aligned_cols=125 Identities=14% Similarity=-0.029 Sum_probs=81.2
Q ss_pred CCeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC--CCCeeEEEeccccc
Q 024021 109 KGRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP--TELFDLIFDYTFFC 185 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~D~v~~~~~~~ 185 (274)
+.+++|+.||.|.+...+...|+ .+.++|+++.+++..+.+.+... .+|+.+... -..+|+|+......
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~~--------~~Di~~~~~~~~~~~D~l~~gpPCQ 82 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEKP--------EGDITQVNEKTIPDHDILCAGFPCQ 82 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCCC--------BSCGGGSCGGGSCCCSEEEEECCCT
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCCC--------cCCHHHcCHhhCCCCCEEEECCCCC
Confidence 47899999999999999988888 58889999999999999875431 577776322 13589999876655
Q ss_pred ccCh------------hHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEE
Q 024021 186 AIEP------------EMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISI 246 (274)
Q Consensus 186 ~~~~------------~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 246 (274)
.++. .....++ ++.+.++|. +++.+....-... ......+.+.+.|++.||.+...
T Consensus 83 ~fS~ag~~~g~~d~r~~L~~~~~-r~i~~~~P~--~~~~ENV~gl~~~--~~~~~~~~i~~~l~~~GY~v~~~ 150 (327)
T 2c7p_A 83 AFSISGKQKGFEDSRGTLFFDIA-RIVREKKPK--VVFMENVKNFASH--DNGNTLEVVKNTMNELDYSFHAK 150 (327)
T ss_dssp TTCTTSCCCGGGSTTSCHHHHHH-HHHHHHCCS--EEEEEEEGGGGTG--GGGHHHHHHHHHHHHTTBCCEEE
T ss_pred CcchhcccCCCcchhhHHHHHHH-HHHHhccCc--EEEEeCcHHHHhc--cccHHHHHHHHHHHhCCCEEEEE
Confidence 4421 1223333 344456775 3444422211100 00113567888999999887544
No 309
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.17 E-value=0.00065 Score=58.33 Aligned_cols=56 Identities=18% Similarity=0.021 Sum_probs=49.1
Q ss_pred CCeEEEEcCCcchhHHHhhCC--CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024021 109 KGRALVPGCGTGYDVVAMASP--ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 168 (274)
+..|||||.|.|.++..|++. +.+++++|+++..+...++.. .. ++++++.+|+.+
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~~---~~l~ii~~D~l~ 116 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-EG---SPLQILKRDPYD 116 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-TT---SSCEEECSCTTC
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-cC---CCEEEEECCccc
Confidence 478999999999999999974 569999999999999998876 22 579999999976
No 310
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.13 E-value=0.00035 Score=65.70 Aligned_cols=125 Identities=19% Similarity=0.215 Sum_probs=81.0
Q ss_pred CCeEEEEcCCcchhHHHhhC------------CC--CeEEEEeC---ChHHHHHHHHH-----------hhcCC------
Q 024021 109 KGRALVPGCGTGYDVVAMAS------------PE--RYVVGLEI---SDIAIKKAEEL-----------SSSLP------ 154 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~~------------~~--~~v~~vD~---~~~~~~~a~~~-----------~~~~~------ 154 (274)
..+|+|+|.|+|.+.+.+.+ .. .+++.+|. +.+.+..+-.. .....
T Consensus 59 ~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 138 (689)
T 3pvc_A 59 SCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGC 138 (689)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEE
T ss_pred ceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCc
Confidence 46999999999998765533 11 47999999 44444433211 11110
Q ss_pred ----C---CcceEEEEcccCCCCC------CCCeeEEEecccccccChhH-HHHHHHHHHhcccCCcEEEEEEccCCCCC
Q 024021 155 ----N---AKFVSFLKADFFTWCP------TELFDLIFDYTFFCAIEPEM-RAAWAQKIKDFLKPDGELITLMFPISDHV 220 (274)
Q Consensus 155 ----~---~~~~~~~~~d~~~~~~------~~~~D~v~~~~~~~~~~~~~-~~~~l~~~~~~L~pgG~~~~~~~~~~~~~ 220 (274)
+ ...+++..+|+.+..+ ...+|.++..++-..-.++. ...++..+.++++|||.+....
T Consensus 139 ~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~------- 211 (689)
T 3pvc_A 139 HRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTFT------- 211 (689)
T ss_dssp EEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEESC-------
T ss_pred eEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEecc-------
Confidence 0 1256778888876221 36799999755422221121 1567899999999999876533
Q ss_pred CCCCcccCHHHHHHHHhcCCCcEEEEe
Q 024021 221 GGPPYKVSVSDYEEVLQPMGFQAISIV 247 (274)
Q Consensus 221 ~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 247 (274)
....+++.+.++||.+..+.
T Consensus 212 -------~~~~vr~~l~~aGf~~~~~~ 231 (689)
T 3pvc_A 212 -------AAGFVRRGLQQAGFNVTKVK 231 (689)
T ss_dssp -------CCHHHHHHHHHTTCEEEEEE
T ss_pred -------CcHHHHHHHHhCCeEEEecc
Confidence 34688999999999988765
No 311
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=97.08 E-value=0.0017 Score=55.27 Aligned_cols=128 Identities=10% Similarity=-0.057 Sum_probs=82.4
Q ss_pred CCeEEEEcCCcchhHHHhhCCCC---eE-EEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC----CCCeeEEEe
Q 024021 109 KGRALVPGCGTGYDVVAMASPER---YV-VGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP----TELFDLIFD 180 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~~~~~---~v-~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~D~v~~ 180 (274)
..+++|+.||.|.+...+...|. .+ .++|+++.+++..+.+.+.. ++.+|+.+..+ ...+|+++.
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~-------~~~~DI~~~~~~~i~~~~~Dil~g 82 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE-------VQVKNLDSISIKQIESLNCNTWFM 82 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC-------CBCCCTTTCCHHHHHHTCCCEEEE
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC-------cccCChhhcCHHHhccCCCCEEEe
Confidence 46899999999999999988773 45 69999999999999887432 45678776322 226899998
Q ss_pred ccccccc--C--------hhHHHHHHHHHHh-cccC---CcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEE
Q 024021 181 YTFFCAI--E--------PEMRAAWAQKIKD-FLKP---DGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISI 246 (274)
Q Consensus 181 ~~~~~~~--~--------~~~~~~~l~~~~~-~L~p---gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 246 (274)
...-..+ + .+.+..++..+.+ +++. .-.+++.+....-.. ....+.+.+.|++.||.+...
T Consensus 83 gpPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV~gl~~-----~~~~~~i~~~l~~~GY~v~~~ 157 (327)
T 3qv2_A 83 SPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVPLFKE-----SLVFKEIYNILIKNQYYIKDI 157 (327)
T ss_dssp CCCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEECGGGGG-----SHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCccCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEEchhhhcC-----hHHHHHHHHHHHhCCCEEEEE
Confidence 7664444 1 1122233444444 4332 234555553332110 114678889999999987654
Q ss_pred ee
Q 024021 247 VD 248 (274)
Q Consensus 247 ~~ 248 (274)
.-
T Consensus 158 vl 159 (327)
T 3qv2_A 158 IC 159 (327)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 312
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.00 E-value=0.0011 Score=62.27 Aligned_cols=125 Identities=18% Similarity=0.182 Sum_probs=81.8
Q ss_pred CCeEEEEcCCcchhHHHhhC------------CC--CeEEEEeC---ChHHHHHHHHH-----------hhcCCC-----
Q 024021 109 KGRALVPGCGTGYDVVAMAS------------PE--RYVVGLEI---SDIAIKKAEEL-----------SSSLPN----- 155 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~~------------~~--~~v~~vD~---~~~~~~~a~~~-----------~~~~~~----- 155 (274)
.-+|+|+|.|+|.+.....+ .. .+++++|. +++.+..+-.. ......
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 146 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 146 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEE
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCc
Confidence 35999999999998764432 12 36999999 76666644332 111110
Q ss_pred --------CcceEEEEcccCCCCC------CCCeeEEEecccccccChhHH-HHHHHHHHhcccCCcEEEEEEccCCCCC
Q 024021 156 --------AKFVSFLKADFFTWCP------TELFDLIFDYTFFCAIEPEMR-AAWAQKIKDFLKPDGELITLMFPISDHV 220 (274)
Q Consensus 156 --------~~~~~~~~~d~~~~~~------~~~~D~v~~~~~~~~~~~~~~-~~~l~~~~~~L~pgG~~~~~~~~~~~~~ 220 (274)
...+++..+|+.+..+ ...||+++....-....++.+ ..++..+.++++|||.+....
T Consensus 147 ~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~------- 219 (676)
T 3ps9_A 147 HRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFT------- 219 (676)
T ss_dssp EEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEESC-------
T ss_pred eEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEecc-------
Confidence 1235566777765221 357999997654332222222 567899999999999876543
Q ss_pred CCCCcccCHHHHHHHHhcCCCcEEEEe
Q 024021 221 GGPPYKVSVSDYEEVLQPMGFQAISIV 247 (274)
Q Consensus 221 ~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 247 (274)
....+++.++++||.+....
T Consensus 220 -------~~~~vr~~L~~aGf~v~~~~ 239 (676)
T 3ps9_A 220 -------SAGFVRRGLQDAGFTMQKRK 239 (676)
T ss_dssp -------CCHHHHHHHHHHTCEEEEEE
T ss_pred -------CcHHHHHHHHhCCeEEEecc
Confidence 34688999999999987754
No 313
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=96.99 E-value=0.026 Score=48.04 Aligned_cols=141 Identities=14% Similarity=0.114 Sum_probs=94.3
Q ss_pred CCeEEEEcCCcchhHHHhhCC---CCeEEEEeCChHHHHHHHHHhhcCC----------------------CCcceEEEE
Q 024021 109 KGRALVPGCGTGYDVVAMASP---ERYVVGLEISDIAIKKAEELSSSLP----------------------NAKFVSFLK 163 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~----------------------~~~~~~~~~ 163 (274)
...|+-+|||-=.....+... +..++=+|+ |+.++.=++.+...+ ...+.+++.
T Consensus 91 ~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v~ 169 (334)
T 3iei_A 91 HCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIG 169 (334)
T ss_dssp CSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEEE
T ss_pred CCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEEc
Confidence 468999999987666666543 557888887 555554333332100 135789999
Q ss_pred cccCCC-----------CCCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC-----------CC
Q 024021 164 ADFFTW-----------CPTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH-----------VG 221 (274)
Q Consensus 164 ~d~~~~-----------~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~-----------~~ 221 (274)
+|+.+. ......-++++-+++.|++++....+++.+.+... +|.+++.+.-..+. ..
T Consensus 170 ~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f~-~~~~i~yE~i~p~d~fg~~M~~~l~~~ 248 (334)
T 3iei_A 170 ADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSFE-RAMFINYEQVNMGDRFGQIMIENLRRR 248 (334)
T ss_dssp CCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCS-SEEEEEEEECCTTSHHHHHHHHHHHTT
T ss_pred cccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhCC-CceEEEEeccCCCCHHHHHHHHHHHHh
Confidence 999761 23345678888899999999999999999998765 55555555432221 11
Q ss_pred CCCc-----ccCHHHHHHHHhcCCCcEEEEeeccc
Q 024021 222 GPPY-----KVSVSDYEEVLQPMGFQAISIVDNKL 251 (274)
Q Consensus 222 ~~~~-----~~~~~~~~~~l~~~Gf~~~~~~~~~~ 251 (274)
|.+. ..+.+...+.+.++||..+...+...
T Consensus 249 g~pl~sl~~y~t~~~~~~r~~~~Gw~~~~~~d~~~ 283 (334)
T 3iei_A 249 QCDLAGVETCKSLESQKERLLSNGWETASAVDMME 283 (334)
T ss_dssp TCCCTTGGGGGCHHHHHHHHHTTTCSEEEEEEHHH
T ss_pred CCCCcccccCCCHHHHHHHHHHcCCCcceeecHHH
Confidence 2221 24778889999999999977665433
No 314
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.90 E-value=0.01 Score=48.44 Aligned_cols=131 Identities=15% Similarity=0.078 Sum_probs=85.1
Q ss_pred CCCCeEEEEcCCcchhHHHhhC---------CCCeEEEEe-----CCh----------------------HHHHHHH---
Q 024021 107 LPKGRALVPGCGTGYDVVAMAS---------PERYVVGLE-----ISD----------------------IAIKKAE--- 147 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~~---------~~~~v~~vD-----~~~----------------------~~~~~a~--- 147 (274)
.-++.|+|+|+-.|..+..++. ...+++++| ..+ +.+....
T Consensus 68 ~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 68 DVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp TSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 3457999999999998877543 246899999 221 1112111
Q ss_pred HHhhcCCC-CcceEEEEcccCCC-------CCCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCC
Q 024021 148 ELSSSLPN-AKFVSFLKADFFTW-------CPTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDH 219 (274)
Q Consensus 148 ~~~~~~~~-~~~~~~~~~d~~~~-------~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~ 219 (274)
++....+. .++++++.+++.+. .+..++|+|+.-.-. .+....+++.+...|+|||++++-++...
T Consensus 148 ~~~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~----Y~~t~~~le~~~p~l~~GGvIv~DD~~~~-- 221 (257)
T 3tos_A 148 ECSDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL----YEPTKAVLEAIRPYLTKGSIVAFDELDNP-- 221 (257)
T ss_dssp HTTSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC----HHHHHHHHHHHGGGEEEEEEEEESSTTCT--
T ss_pred hhhhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc----cchHHHHHHHHHHHhCCCcEEEEcCCCCC--
Confidence 11222333 37899999999872 234579999965532 13345678999999999999998665321
Q ss_pred CCCCCcccCHHHHHHHHhcCCCcEEEEe
Q 024021 220 VGGPPYKVSVSDYEEVLQPMGFQAISIV 247 (274)
Q Consensus 220 ~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 247 (274)
.+.--..-+.+.+...|.++....
T Consensus 222 ----~w~G~~~A~~ef~~~~~~~i~~~p 245 (257)
T 3tos_A 222 ----KWPGENIAMRKVLGLDHAPLRLLP 245 (257)
T ss_dssp ----TCTHHHHHHHHHTCTTSSCCEECT
T ss_pred ----CChHHHHHHHHHHhhCCCeEEEcc
Confidence 111135667777888887766553
No 315
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.90 E-value=0.0019 Score=54.87 Aligned_cols=64 Identities=9% Similarity=-0.045 Sum_probs=55.0
Q ss_pred CCCccHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCC
Q 024021 91 IGQPAPIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLP 154 (274)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~ 154 (274)
...+...+..++.....++..|||.-||+|..+.+..+.|.+.+|+|+++..++.+++++...+
T Consensus 235 ~~kp~~l~~~~i~~~~~~~~~VlDpF~GsGtt~~aa~~~gr~~ig~e~~~~~~~~~~~r~~~~~ 298 (323)
T 1boo_A 235 ARFPAKLPEFFIRMLTEPDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYVAASAFRFLDNN 298 (323)
T ss_dssp SCCCTHHHHHHHHHHCCTTCEEEETTCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHGGGSCSC
T ss_pred CcCCHHHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHcCCCEEEEeCCHHHHHHHHHHHHhcc
Confidence 3455677777777666778999999999999999999999999999999999999999987654
No 316
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=96.82 E-value=0.0094 Score=50.59 Aligned_cols=126 Identities=13% Similarity=0.034 Sum_probs=81.6
Q ss_pred CeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC--CCCeeEEEecccccc
Q 024021 110 GRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP--TELFDLIFDYTFFCA 186 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~D~v~~~~~~~~ 186 (274)
++|||+-||.|.+..-+.+.|. .+.++|+++.+++--+.+.+ -.++.+|+.+... -..+|+++....-..
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~-------~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ~ 73 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHS-------AKLIKGDISKISSDEFPKCDGIIGGPPSQS 73 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHCC-------SEEEESCGGGCCGGGSCCCSEEECCCCGGG
T ss_pred CeEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHCC-------CCcccCChhhCCHhhCCcccEEEecCCCCC
Confidence 4799999999999999988888 56789999999988888863 3567889887322 246899997655433
Q ss_pred c---------Ch---hHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEe
Q 024021 187 I---------EP---EMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIV 247 (274)
Q Consensus 187 ~---------~~---~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 247 (274)
+ .+ .....+ -++.+.++|. +++.+....-.. .........+.+.|++.||.+....
T Consensus 74 fS~ag~~~g~~d~R~~L~~~~-~r~i~~~~Pk--~~~~ENV~gl~~--~~~~~~~~~i~~~l~~~GY~v~~~v 141 (331)
T 3ubt_Y 74 WSEGGSLRGIDDPRGKLFYEY-IRILKQKKPI--FFLAENVKGMMA--QRHNKAVQEFIQEFDNAGYDVHIIL 141 (331)
T ss_dssp TEETTEECCTTCGGGHHHHHH-HHHHHHHCCS--EEEEEECCGGGG--CTTSHHHHHHHHHHHHHTEEEEEEE
T ss_pred cCCCCCccCCCCchhHHHHHH-HHHHhccCCe--EEEeeeeccccc--ccccchhhhhhhhhccCCcEEEEEe
Confidence 3 11 112233 3445556885 444443221110 0111246788888999999875443
No 317
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.61 E-value=0.026 Score=41.37 Aligned_cols=109 Identities=17% Similarity=0.103 Sum_probs=69.0
Q ss_pred CeEEEEcCCc-chhH-HHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-----CCCCCeeEEEecc
Q 024021 110 GRALVPGCGT-GYDV-VAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-----CPTELFDLIFDYT 182 (274)
Q Consensus 110 ~~vLDiG~G~-G~~~-~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~D~v~~~~ 182 (274)
.+|+=+|||. |... ..|.+.|..|+++|.+++.++.++.. .+.++.+|..+. .....+|+|++.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~--------g~~~i~gd~~~~~~l~~a~i~~ad~vi~~- 78 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRER--------GVRAVLGNAANEEIMQLAHLECAKWLILT- 78 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT--------TCEEEESCTTSHHHHHHTTGGGCSEEEEC-
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHc--------CCCEEECCCCCHHHHHhcCcccCCEEEEE-
Confidence 5788888864 2222 23334789999999999988877642 267788888762 122468888843
Q ss_pred cccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEE
Q 024021 183 FFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAIS 245 (274)
Q Consensus 183 ~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 245 (274)
.+++.....+-...+.+.|+..++... ...+..+.|++.|-..+-
T Consensus 79 ----~~~~~~n~~~~~~a~~~~~~~~iiar~--------------~~~~~~~~l~~~G~d~vi 123 (140)
T 3fwz_A 79 ----IPNGYEAGEIVASARAKNPDIEIIARA--------------HYDDEVAYITERGANQVV 123 (140)
T ss_dssp ----CSCHHHHHHHHHHHHHHCSSSEEEEEE--------------SSHHHHHHHHHTTCSEEE
T ss_pred ----CCChHHHHHHHHHHHHHCCCCeEEEEE--------------CCHHHHHHHHHCCCCEEE
Confidence 222222233344566677888777655 334556777888876543
No 318
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=96.61 E-value=0.0029 Score=53.64 Aligned_cols=62 Identities=16% Similarity=0.118 Sum_probs=51.8
Q ss_pred CCccHHHHHHHhcCCCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCCh---HHHHHHHHHhhcC
Q 024021 92 GQPAPIIVHLHQSGALPKGRALVPGCGTGYDVVAMASPERYVVGLEISD---IAIKKAEELSSSL 153 (274)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~---~~~~~a~~~~~~~ 153 (274)
..+...+..++.....++..|||.-||+|..+.+..+.|.+.+|+|+++ ..++.+++++...
T Consensus 226 ~kp~~l~~~~i~~~~~~~~~vlDpF~GsGtt~~aa~~~~r~~ig~e~~~~~~~~~~~~~~Rl~~~ 290 (319)
T 1eg2_A 226 QKPAAVIERLVRALSHPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQLTFLQDD 290 (319)
T ss_dssp CCCHHHHHHHHHHHSCTTCEEEETTCTTCHHHHHHHHHTCEEEEEESSTHHHHHHHHHHHHC---
T ss_pred CCCHHHHHHHHHHhCCCCCEEEecCCCCCHHHHHHHHcCCcEEEEECCccHHHHHHHHHHHHHHc
Confidence 4456667777776667789999999999999999998899999999999 9999999998654
No 319
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=96.57 E-value=0.0025 Score=54.35 Aligned_cols=125 Identities=14% Similarity=0.009 Sum_probs=81.0
Q ss_pred CeEEEEcCCcchhHHHhhCCCC---eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC----CCCeeEEEecc
Q 024021 110 GRALVPGCGTGYDVVAMASPER---YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP----TELFDLIFDYT 182 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~D~v~~~~ 182 (274)
.+++|+.||.|.+...+...|. .+.++|+++.+++..+.+.+. ..++.+|+.+..+ ...+|+++...
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~------~~~~~~DI~~~~~~~~~~~~~D~l~ggp 77 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPE------TNLLNRNIQQLTPQVIKKWNVDTILMSP 77 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT------SCEECCCGGGCCHHHHHHTTCCEEEECC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCC------CceeccccccCCHHHhccCCCCEEEecC
Confidence 4799999999999998887664 578999999999998888743 4466788876322 23689999865
Q ss_pred cccccC---------hh---HHHHHHHHHHhccc-CCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEEEee
Q 024021 183 FFCAIE---------PE---MRAAWAQKIKDFLK-PDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 183 ~~~~~~---------~~---~~~~~l~~~~~~L~-pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 248 (274)
.-..++ ++ ....++ ++.+.++ | .+++.+....-.. ....+.+.+.|++.||.+....-
T Consensus 78 PCQ~fS~ag~~~~~~d~r~~L~~~~~-r~i~~~~~P--~~~vlENV~gl~~-----~~~~~~i~~~l~~~GY~v~~~vl 148 (333)
T 4h0n_A 78 PCQPFTRNGKYLDDNDPRTNSFLYLI-GILDQLDNV--DYILMENVKGFEN-----STVRNLFIDKLKECNFIYQEFLL 148 (333)
T ss_dssp CCCCSEETTEECCTTCTTSCCHHHHH-HHGGGCTTC--CEEEEEECTTGGG-----SHHHHHHHHHHHHTTEEEEEEEE
T ss_pred CCcchhhhhhccCCcCcccccHHHHH-HHHHHhcCC--CEEEEecchhhhh-----hhHHHHHHHHHHhCCCeEEEEEe
Confidence 544331 11 122222 3334444 5 4555553332110 11357899999999998865443
No 320
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.22 E-value=0.013 Score=49.03 Aligned_cols=92 Identities=12% Similarity=0.136 Sum_probs=58.5
Q ss_pred cceEEEEcccCC---CCCCCCeeEEEecccccccCh------------------hHHHHHHHHHHhcccCCcEEEEEEcc
Q 024021 157 KFVSFLKADFFT---WCPTELFDLIFDYTFFCAIEP------------------EMRAAWAQKIKDFLKPDGELITLMFP 215 (274)
Q Consensus 157 ~~~~~~~~d~~~---~~~~~~~D~v~~~~~~~~~~~------------------~~~~~~l~~~~~~L~pgG~~~~~~~~ 215 (274)
.+++++++|..+ ..++++||+|+++..+..... .....++..+.++|+|||.+++....
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d 99 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGD 99 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECC
Confidence 457899999987 345678999999988753210 11245778899999999999886532
Q ss_pred CCCC--CCCCCcccC-HHHHHHHHhcCCCcEEEEee
Q 024021 216 ISDH--VGGPPYKVS-VSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 216 ~~~~--~~~~~~~~~-~~~~~~~l~~~Gf~~~~~~~ 248 (274)
.... ..+...... ...+..+++++||......-
T Consensus 100 ~~~~~~~~g~~~~~~~~~~l~~~~~~~Gf~~~~~ii 135 (297)
T 2zig_A 100 VAVARRRFGRHLVFPLHADIQVRCRKLGFDNLNPII 135 (297)
T ss_dssp EEEECC----EEEECHHHHHHHHHHHTTCEEEEEEE
T ss_pred CccccccCCcccccccHHHHHHHHHHcCCeeeccEE
Confidence 1100 001000011 25688889999998876443
No 321
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.09 E-value=0.11 Score=37.73 Aligned_cols=105 Identities=15% Similarity=0.004 Sum_probs=64.3
Q ss_pred CCeEEEEcCCcchhHHHhh----CCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-----CCCCCeeEEE
Q 024021 109 KGRALVPGCGTGYDVVAMA----SPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-----CPTELFDLIF 179 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~----~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~D~v~ 179 (274)
..+|+=+|+| ..+..++ +.|.+|+++|.+++.++.++.. ...++.+|..+. .....+|+|+
T Consensus 6 ~~~v~I~G~G--~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~--------~~~~~~gd~~~~~~l~~~~~~~~d~vi 75 (141)
T 3llv_A 6 RYEYIVIGSE--AAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE--------GFDAVIADPTDESFYRSLDLEGVSAVL 75 (141)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT--------TCEEEECCTTCHHHHHHSCCTTCSEEE
T ss_pred CCEEEEECCC--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC--------CCcEEECCCCCHHHHHhCCcccCCEEE
Confidence 3578889885 4554444 4789999999999988777642 266788888762 1234689888
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcE
Q 024021 180 DYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQA 243 (274)
Q Consensus 180 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 243 (274)
.... ++.....+....+.+. ...++... +..+..+.++..|...
T Consensus 76 ~~~~-----~~~~n~~~~~~a~~~~-~~~iia~~--------------~~~~~~~~l~~~G~~~ 119 (141)
T 3llv_A 76 ITGS-----DDEFNLKILKALRSVS-DVYAIVRV--------------SSPKKKEEFEEAGANL 119 (141)
T ss_dssp ECCS-----CHHHHHHHHHHHHHHC-CCCEEEEE--------------SCGGGHHHHHHTTCSE
T ss_pred EecC-----CHHHHHHHHHHHHHhC-CceEEEEE--------------cChhHHHHHHHcCCCE
Confidence 5332 2222233344445555 55565544 2234445667777653
No 322
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=96.06 E-value=0.032 Score=49.88 Aligned_cols=127 Identities=12% Similarity=-0.018 Sum_probs=79.3
Q ss_pred CeEEEEcCCcchhHHHhhCCCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-----------------
Q 024021 110 GRALVPGCGTGYDVVAMASPER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP----------------- 171 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~----------------- 171 (274)
.+++|+-||.|.+...+...|. .+.++|+++.+++.-+.+.... +...++.+|+.+...
T Consensus 89 ~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~~---p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i~~ 165 (482)
T 3me5_A 89 FRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYCD---PATHHFNEDIRDITLSHQEGVSDEAAAEHIRQ 165 (482)
T ss_dssp EEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCCC---TTTCEEESCTHHHHCTTCTTSCHHHHHHHHHH
T ss_pred ceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhcccC---CCcceeccchhhhhhccccccchhhHHhhhhh
Confidence 5899999999999999988888 5889999999988888876322 234566788765221
Q ss_pred -CCCeeEEEecccccccChh---------------------HHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCH
Q 024021 172 -TELFDLIFDYTFFCAIEPE---------------------MRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSV 229 (274)
Q Consensus 172 -~~~~D~v~~~~~~~~~~~~---------------------~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~ 229 (274)
...+|+++.......++.. ....+ -++.+.++|. +++.+....-... ......
T Consensus 166 ~~~~~Dvl~gGpPCQ~FS~AG~~k~~~~g~~~G~~~D~R~~Lf~e~-~riI~~~rPk--~fvlENV~gl~s~--~~g~~f 240 (482)
T 3me5_A 166 HIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDV-VRIIDARRPA--MFVLENVKNLKSH--DKGKTF 240 (482)
T ss_dssp HSCCCSEEEEECCCCCC------------------CTTTTSHHHHH-HHHHHHHCCS--EEEEEEETTTTTG--GGGHHH
T ss_pred cCCCCCEEEecCCCcchhhhCcccccccccccccccCccccHHHHH-HHHHHHcCCc--EEEEeCcHHHhcc--cCCcHH
Confidence 1358999987654443210 11222 2333445664 4444433221100 011135
Q ss_pred HHHHHHHhcCCCcEE
Q 024021 230 SDYEEVLQPMGFQAI 244 (274)
Q Consensus 230 ~~~~~~l~~~Gf~~~ 244 (274)
..+.+.|++.||.+.
T Consensus 241 ~~i~~~L~~lGY~v~ 255 (482)
T 3me5_A 241 RIIMQTLDELGYDVA 255 (482)
T ss_dssp HHHHHHHHHTTEEET
T ss_pred HHHHHHHhcCCcEEE
Confidence 688889999998763
No 323
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=95.79 E-value=0.022 Score=47.59 Aligned_cols=71 Identities=13% Similarity=-0.011 Sum_probs=55.1
Q ss_pred CCCeEEEEcCCcchhHHHhhCCCCe---EEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-----CCCeeEEE
Q 024021 108 PKGRALVPGCGTGYDVVAMASPERY---VVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP-----TELFDLIF 179 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~~D~v~ 179 (274)
...+++|+-||.|.+...+...|.+ +.++|+++.+++..+.+.+ ...+..+|+.+... .+.+|+++
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~------~~~~~~~DI~~i~~~~i~~~~~~Dll~ 88 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQ------GKIMYVGDVRSVTQKHIQEWGPFDLVI 88 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTT------TCEEEECCGGGCCHHHHHHTCCCSEEE
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCC------CCceeCCChHHccHHHhcccCCcCEEE
Confidence 3469999999999999999888875 4899999999888877763 34577888877322 13689999
Q ss_pred ecccc
Q 024021 180 DYTFF 184 (274)
Q Consensus 180 ~~~~~ 184 (274)
.....
T Consensus 89 ggpPC 93 (295)
T 2qrv_A 89 GGSPC 93 (295)
T ss_dssp ECCCC
T ss_pred ecCCC
Confidence 86543
No 324
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=95.64 E-value=0.019 Score=50.33 Aligned_cols=60 Identities=10% Similarity=0.045 Sum_probs=46.6
Q ss_pred CCCCeEEEEcCCcchhHHHhh-C-C--CCeEEEEeCChHHHHHHHHHhhc--CCCC-cceEEEEccc
Q 024021 107 LPKGRALVPGCGTGYDVVAMA-S-P--ERYVVGLEISDIAIKKAEELSSS--LPNA-KFVSFLKADF 166 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~-~-~--~~~v~~vD~~~~~~~~a~~~~~~--~~~~-~~~~~~~~d~ 166 (274)
.++..++|+||+.|..+..++ + . ..+|+++|.+|...+..+++... ++.. ++++++..-+
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al 291 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGA 291 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEE
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEE
Confidence 456899999999999998877 3 2 26999999999999999999876 3223 5666665443
No 325
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.63 E-value=0.017 Score=49.04 Aligned_cols=90 Identities=18% Similarity=0.185 Sum_probs=59.9
Q ss_pred cceEEEEcccCC---CCCCCCeeEEEecccccccC------------hhHHHHHHHHHHhcccCCcEEEEEEccCCCCCC
Q 024021 157 KFVSFLKADFFT---WCPTELFDLIFDYTFFCAIE------------PEMRAAWAQKIKDFLKPDGELITLMFPISDHVG 221 (274)
Q Consensus 157 ~~~~~~~~d~~~---~~~~~~~D~v~~~~~~~~~~------------~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~ 221 (274)
....++.+|..+ ..+.++||+|++...+.... ......++..+.++|+|||.+++..-.... .
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~~~--~ 90 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYM--K 90 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEE--T
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCEec--C
Confidence 457889999865 35577899999998875321 024567888999999999999887632200 0
Q ss_pred CCCcc--cCHHHHHHHHhcCCCcEEEEee
Q 024021 222 GPPYK--VSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 222 ~~~~~--~~~~~~~~~l~~~Gf~~~~~~~ 248 (274)
+.++. .....+.++++..||.......
T Consensus 91 g~~~~~~~~~~~i~~~~~~~Gf~~~~~ii 119 (323)
T 1boo_A 91 GVPARSIYNFRVLIRMIDEVGFFLAEDFY 119 (323)
T ss_dssp TEEEECCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CCcccccchHHHHHHHHHhCCCEEEEEEE
Confidence 11111 1234566778899998876443
No 326
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=95.40 E-value=0.0075 Score=52.08 Aligned_cols=92 Identities=14% Similarity=0.161 Sum_probs=62.0
Q ss_pred CCCCeEEEEcCCc-chhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc---ccCC----CCCCCCee
Q 024021 107 LPKGRALVPGCGT-GYDVVAMAS-PER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA---DFFT----WCPTELFD 176 (274)
Q Consensus 107 ~~~~~vLDiG~G~-G~~~~~l~~-~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~---d~~~----~~~~~~~D 176 (274)
.++.+||-+|+|. |..+..+++ .|+ +|+++|.+++.++.+++.-. ..++.. |+.+ ... +.+|
T Consensus 189 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa-------~~vi~~~~~~~~~~~~~~~~-gg~D 260 (371)
T 1f8f_A 189 TPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGA-------THVINSKTQDPVAAIKEITD-GGVN 260 (371)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTC-------SEEEETTTSCHHHHHHHHTT-SCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCC-------CEEecCCccCHHHHHHHhcC-CCCc
Confidence 4568999999876 677777776 677 79999999999999876531 111221 1111 112 2799
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
+|+..-.- ...++...++|+++|.+++...
T Consensus 261 ~vid~~g~--------~~~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 261 FALESTGS--------PEILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp EEEECSCC--------HHHHHHHHHTEEEEEEEEECCC
T ss_pred EEEECCCC--------HHHHHHHHHHHhcCCEEEEeCC
Confidence 99853221 2356788999999999887653
No 327
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.36 E-value=0.078 Score=45.16 Aligned_cols=91 Identities=19% Similarity=0.108 Sum_probs=61.4
Q ss_pred CCCCCeEEEEcCCc-chhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccc
Q 024021 106 ALPKGRALVPGCGT-GYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTF 183 (274)
Q Consensus 106 ~~~~~~vLDiG~G~-G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~ 183 (274)
..++.+||-+|+|. |..+.++++ .|++|++++.+++..+.+++.-. + . ++ .|.... ...+|+|+..-.
T Consensus 174 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa-----~-~-v~-~~~~~~--~~~~D~vid~~g 243 (348)
T 3two_A 174 VTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGV-----K-H-FY-TDPKQC--KEELDFIISTIP 243 (348)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTC-----S-E-EE-SSGGGC--CSCEEEEEECCC
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCC-----C-e-ec-CCHHHH--hcCCCEEEECCC
Confidence 45678999999865 666667766 78899999999998888876321 1 1 12 222212 127999995432
Q ss_pred ccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 184 FCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 184 ~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
-. ..++...++|+++|.+++...
T Consensus 244 ~~--------~~~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 244 TH--------YDLKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp SC--------CCHHHHHTTEEEEEEEEECCC
T ss_pred cH--------HHHHHHHHHHhcCCEEEEECC
Confidence 11 135678899999999988654
No 328
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.28 E-value=0.52 Score=33.70 Aligned_cols=87 Identities=15% Similarity=0.046 Sum_probs=52.4
Q ss_pred CeEEEEcCCcchhHHHh----hCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-----CCCCCeeEEEe
Q 024021 110 GRALVPGCGTGYDVVAM----ASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-----CPTELFDLIFD 180 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~~l----~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~D~v~~ 180 (274)
++|+=+|+ |..+..+ .+.|.+|+++|.+++.++..+... .+.++.+|..+. .....+|+|+.
T Consensus 5 m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~-------~~~~~~~d~~~~~~l~~~~~~~~d~vi~ 75 (140)
T 1lss_A 5 MYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-------DALVINGDCTKIKTLEDAGIEDADMYIA 75 (140)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-------SSEEEESCTTSHHHHHHTTTTTCSEEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc-------CcEEEEcCCCCHHHHHHcCcccCCEEEE
Confidence 57888877 5555444 347889999999998776655432 245666776541 11346898886
Q ss_pred cccccccChhHHHHHHHHHHhcccCCcEEEE
Q 024021 181 YTFFCAIEPEMRAAWAQKIKDFLKPDGELIT 211 (274)
Q Consensus 181 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~ 211 (274)
.-. .+.....+..+.+.+.++ .+++
T Consensus 76 ~~~-----~~~~~~~~~~~~~~~~~~-~ii~ 100 (140)
T 1lss_A 76 VTG-----KEEVNLMSSLLAKSYGIN-KTIA 100 (140)
T ss_dssp CCS-----CHHHHHHHHHHHHHTTCC-CEEE
T ss_pred eeC-----CchHHHHHHHHHHHcCCC-EEEE
Confidence 532 222233445556667775 4444
No 329
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.25 E-value=0.059 Score=46.92 Aligned_cols=100 Identities=15% Similarity=0.037 Sum_probs=62.7
Q ss_pred CCCCCeEEEEcCCc-chhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc---cc-CC----CCCCCC
Q 024021 106 ALPKGRALVPGCGT-GYDVVAMAS-PER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA---DF-FT----WCPTEL 174 (274)
Q Consensus 106 ~~~~~~vLDiG~G~-G~~~~~l~~-~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~---d~-~~----~~~~~~ 174 (274)
..++.+||-+|+|. |..+.++++ .|+ +|+++|.+++.++.+++. + .+.+.. |. .+ ......
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----G----a~~i~~~~~~~~~~~~~~~~~g~g 254 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDA----G----FETIDLRNSAPLRDQIDQILGKPE 254 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTT----T----CEEEETTSSSCHHHHHHHHHSSSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc----C----CcEEcCCCcchHHHHHHHHhCCCC
Confidence 34568999999876 777777776 688 999999999988887643 2 122221 11 11 111236
Q ss_pred eeEEEecccccccC--h----hHHHHHHHHHHhcccCCcEEEEEE
Q 024021 175 FDLIFDYTFFCAIE--P----EMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 175 ~D~v~~~~~~~~~~--~----~~~~~~l~~~~~~L~pgG~~~~~~ 213 (274)
+|+|+..-.-.... . ......++...++|++||++++..
T Consensus 255 ~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 255 VDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp EEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCS
T ss_pred CCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEec
Confidence 99999653322100 0 000134678889999999987654
No 330
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.23 E-value=0.01 Score=50.78 Aligned_cols=94 Identities=14% Similarity=0.060 Sum_probs=62.2
Q ss_pred CCCCCeEEEEcCCc-chhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc---ccCC----CCCCCCe
Q 024021 106 ALPKGRALVPGCGT-GYDVVAMAS-PER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA---DFFT----WCPTELF 175 (274)
Q Consensus 106 ~~~~~~vLDiG~G~-G~~~~~l~~-~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~---d~~~----~~~~~~~ 175 (274)
..++.+||-+|+|. |..+.++++ .|+ +|+++|.+++.++.+++.-.. .++.. |+.+ ......+
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~-------~vi~~~~~~~~~~v~~~t~g~g~ 236 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGAT-------DIINYKNGDIVEQILKATDGKGV 236 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCC-------EEECGGGSCHHHHHHHHTTTCCE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCc-------eEEcCCCcCHHHHHHHHcCCCCC
Confidence 34568999999865 566666666 787 899999999989988875321 12211 1111 2233469
Q ss_pred eEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 176 DLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 176 D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
|+|+....- ...++...++|++||.++....
T Consensus 237 D~v~d~~g~--------~~~~~~~~~~l~~~G~~v~~G~ 267 (352)
T 3fpc_A 237 DKVVIAGGD--------VHTFAQAVKMIKPGSDIGNVNY 267 (352)
T ss_dssp EEEEECSSC--------TTHHHHHHHHEEEEEEEEECCC
T ss_pred CEEEECCCC--------hHHHHHHHHHHhcCCEEEEecc
Confidence 999953221 1246778899999999887654
No 331
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.20 E-value=0.43 Score=36.26 Aligned_cols=107 Identities=16% Similarity=0.087 Sum_probs=62.9
Q ss_pred CCeEEEEcCCcchhHHHh----hCC-CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-----C-CCCCeeE
Q 024021 109 KGRALVPGCGTGYDVVAM----ASP-ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-----C-PTELFDL 177 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l----~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-----~-~~~~~D~ 177 (274)
+.+|+=+|+| ..+..+ .+. |..|+++|.+++.++.++.. .+..+.+|..+. . ....+|+
T Consensus 39 ~~~v~IiG~G--~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~--------g~~~~~gd~~~~~~l~~~~~~~~ad~ 108 (183)
T 3c85_A 39 HAQVLILGMG--RIGTGAYDELRARYGKISLGIEIREEAAQQHRSE--------GRNVISGDATDPDFWERILDTGHVKL 108 (183)
T ss_dssp TCSEEEECCS--HHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHT--------TCCEEECCTTCHHHHHTBCSCCCCCE
T ss_pred CCcEEEECCC--HHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHC--------CCCEEEcCCCCHHHHHhccCCCCCCE
Confidence 4689988875 444333 346 88999999999887776532 145666776541 1 2346898
Q ss_pred EEecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEE
Q 024021 178 IFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAI 244 (274)
Q Consensus 178 v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 244 (274)
|+..- +++.....+-...+.+.|++.++.... ..+..+.+++.|-..+
T Consensus 109 vi~~~-----~~~~~~~~~~~~~~~~~~~~~ii~~~~--------------~~~~~~~l~~~G~~~v 156 (183)
T 3c85_A 109 VLLAM-----PHHQGNQTALEQLQRRNYKGQIAAIAE--------------YPDQLEGLLESGVDAA 156 (183)
T ss_dssp EEECC-----SSHHHHHHHHHHHHHTTCCSEEEEEES--------------SHHHHHHHHHHTCSEE
T ss_pred EEEeC-----CChHHHHHHHHHHHHHCCCCEEEEEEC--------------CHHHHHHHHHcCCCEE
Confidence 88532 212222223345555677777776541 2233446666676654
No 332
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=95.18 E-value=0.52 Score=38.43 Aligned_cols=128 Identities=12% Similarity=-0.071 Sum_probs=74.8
Q ss_pred CeEEEEcCCcchhHHHhhC----CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccccc
Q 024021 110 GRALVPGCGTGYDVVAMAS----PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFC 185 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~~l~~----~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~ 185 (274)
++||=.|+ |..+..+++ .|.+|++++.++........ .+++++.+|+.+.. ...+|+|+......
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--------~~~~~~~~D~~d~~-~~~~d~vi~~a~~~ 74 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA--------SGAEPLLWPGEEPS-LDGVTHLLISTAPD 74 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH--------TTEEEEESSSSCCC-CTTCCEEEECCCCB
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh--------CCCeEEEecccccc-cCCCCEEEECCCcc
Confidence 58999994 888766654 78899999998765443322 24889999998855 56789999766544
Q ss_pred ccChhHHHHHHHHHHhcccCCcEEE-EEEccCCCCCCC----------C--CcccCHHHHHHHHhcC-CCcEEEEee
Q 024021 186 AIEPEMRAAWAQKIKDFLKPDGELI-TLMFPISDHVGG----------P--PYKVSVSDYEEVLQPM-GFQAISIVD 248 (274)
Q Consensus 186 ~~~~~~~~~~l~~~~~~L~pgG~~~-~~~~~~~~~~~~----------~--~~~~~~~~~~~~l~~~-Gf~~~~~~~ 248 (274)
.........+++.+.+.-..-+.++ +..........+ + +|..++...++++... |+..+-+..
T Consensus 75 ~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~ilRp 151 (286)
T 3ius_A 75 SGGDPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAVPNLPLHVFRL 151 (286)
T ss_dssp TTBCHHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHHHSTTCCEEEEEE
T ss_pred ccccHHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEEEEec
Confidence 3322333445555444312223444 433222111111 1 1233455666777776 777665554
No 333
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.08 E-value=0.09 Score=45.03 Aligned_cols=96 Identities=15% Similarity=0.036 Sum_probs=63.5
Q ss_pred CCCCCeEEEEcCCc-chhHHHhhC-CCCe-EEEEeCChHHHHHHHHHhhcCCCCcceEEEE-----cccCC----CCCCC
Q 024021 106 ALPKGRALVPGCGT-GYDVVAMAS-PERY-VVGLEISDIAIKKAEELSSSLPNAKFVSFLK-----ADFFT----WCPTE 173 (274)
Q Consensus 106 ~~~~~~vLDiG~G~-G~~~~~l~~-~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~-----~d~~~----~~~~~ 173 (274)
..++.+||=+|+|. |..+.++++ .|++ |+++|.+++..+.+++. ... -+.+.. .|+.+ .....
T Consensus 177 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~----~~~~~~~~~~~~~~~~~v~~~t~g~ 251 (363)
T 3m6i_A 177 VRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPE----VVTHKVERLSAEESAKKIVESFGGI 251 (363)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTT----CEEEECCSCCHHHHHHHHHHHTSSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chh----cccccccccchHHHHHHHHHHhCCC
Confidence 34567899898865 566667766 7886 99999999999999876 221 122221 12211 12245
Q ss_pred CeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 174 LFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 174 ~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
.+|+|+..-. . ...+....++|++||.+++...
T Consensus 252 g~Dvvid~~g-----~---~~~~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 252 EPAVALECTG-----V---ESSIAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp CCSEEEECSC-----C---HHHHHHHHHHSCTTCEEEECCC
T ss_pred CCCEEEECCC-----C---hHHHHHHHHHhcCCCEEEEEcc
Confidence 7999995322 1 1346788899999999988654
No 334
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.05 E-value=0.076 Score=45.43 Aligned_cols=93 Identities=19% Similarity=0.141 Sum_probs=61.5
Q ss_pred CCCCCeEEEEcCCc-chhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc------ccCC----CCCC
Q 024021 106 ALPKGRALVPGCGT-GYDVVAMAS-PER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA------DFFT----WCPT 172 (274)
Q Consensus 106 ~~~~~~vLDiG~G~-G~~~~~l~~-~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~------d~~~----~~~~ 172 (274)
..++.+||-+|+|. |..+..+++ .|+ +|+++|.+++..+.+++.-. + ..+.. +..+ ...
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa-----~--~vi~~~~~~~~~~~~~i~~~~~- 240 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGA-----D--LVLQISKESPQEIARKVEGQLG- 240 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC-----S--EEEECSSCCHHHHHHHHHHHHT-
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCC-----C--EEEcCcccccchHHHHHHHHhC-
Confidence 34568999999875 666777766 788 89999999998888875421 1 12211 1111 112
Q ss_pred CCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 173 ELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 173 ~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
..+|+|+..-.- ...+....++|++||.++....
T Consensus 241 ~g~D~vid~~g~--------~~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 241 CKPEVTIECTGA--------EASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp SCCSEEEECSCC--------HHHHHHHHHHSCTTCEEEECSC
T ss_pred CCCCEEEECCCC--------hHHHHHHHHHhcCCCEEEEEec
Confidence 469999853221 1345778899999999887643
No 335
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.97 E-value=1.1 Score=41.84 Aligned_cols=151 Identities=12% Similarity=0.123 Sum_probs=95.4
Q ss_pred HHHHHHhcC-CCCCCeEEEEcCCcchhHHHhhCC----------CCeEEEEeCChHHHHHHHHHhhcCC-----------
Q 024021 97 IIVHLHQSG-ALPKGRALVPGCGTGYDVVAMASP----------ERYVVGLEISDIAIKKAEELSSSLP----------- 154 (274)
Q Consensus 97 ~~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~----------~~~v~~vD~~~~~~~~a~~~~~~~~----------- 154 (274)
.+.+++... ..+...|+-+|||-=.....+... +..++=+|+ |+.++.=++.+....
T Consensus 95 ~v~~fl~~~~~~~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~-p~v~~~K~~~l~~~~~l~~~~~~~~~ 173 (695)
T 2zwa_A 95 RLNSIIEQTPQDKKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDY-SDLLKIKIELIKTIPELSKIIGLSED 173 (695)
T ss_dssp HHHHHHHHSCTTSEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEEC-HHHHHHHHHHHHHCHHHHHHTTCCSS
T ss_pred HHHHHHhcccCCCCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECcc-HHHHHHHHHHHHcChHHHHhhccccc
Confidence 345555543 223468999999987777777553 345666666 444444333332110
Q ss_pred --C----------CcceEEEEcccCCC-----------C-CCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEE
Q 024021 155 --N----------AKFVSFLKADFFTW-----------C-PTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELI 210 (274)
Q Consensus 155 --~----------~~~~~~~~~d~~~~-----------~-~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~ 210 (274)
. +.+..++.+|+.+. . .....-++++-.++.|++++....+++.+.+. +++.++
T Consensus 174 ~~~~~~~~~~~~~s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~~--~~~~~~ 251 (695)
T 2zwa_A 174 KDYVDDSNVDFLTTPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSKM--ENSHFI 251 (695)
T ss_dssp CSSCSCTTCCCEECSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHTS--SSEEEE
T ss_pred cccccccccccccCCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhhC--CCceEE
Confidence 0 13788999999872 0 33445677888999999999999999999864 677766
Q ss_pred EEEccCCC---C-----------CCCCC-----cccCHHHHHHHHhcCCCcEEEEeecc
Q 024021 211 TLMFPISD---H-----------VGGPP-----YKVSVSDYEEVLQPMGFQAISIVDNK 250 (274)
Q Consensus 211 ~~~~~~~~---~-----------~~~~~-----~~~~~~~~~~~l~~~Gf~~~~~~~~~ 250 (274)
+.+.-... . ..+.+ ...+.++..+.|.++||..+...+..
T Consensus 252 ~~e~~~~~~~~d~f~~~m~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~Gw~~v~~~~~~ 310 (695)
T 2zwa_A 252 ILEQLIPKGPFEPFSKQMLAHFKRNDSPLQSVLKYNTIESQVQRFNKLGFAYVNVGDMF 310 (695)
T ss_dssp EEEECCTTCTTSHHHHHHHHHHHHTTCCCCGGGTCCSHHHHHHHHHHTTCCEEEEEEHH
T ss_pred EEEeecCCCCCChHHHHHHHHHHHcCCCCCccccCCCHHHHHHHHHHCCCCCcceeeHH
Confidence 65532221 0 11111 12368899999999999977666543
No 336
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.95 E-value=0.49 Score=34.83 Aligned_cols=92 Identities=11% Similarity=0.047 Sum_probs=57.9
Q ss_pred CeEEEEcCCcchhHHHhhC----CCCeEEEEeCC-hHHHHHHHHHhhcCCCCcceEEEEcccCCC-----CCCCCeeEEE
Q 024021 110 GRALVPGCGTGYDVVAMAS----PERYVVGLEIS-DIAIKKAEELSSSLPNAKFVSFLKADFFTW-----CPTELFDLIF 179 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~~l~~----~~~~v~~vD~~-~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~D~v~ 179 (274)
.+|+=+|+ |..+..+++ .|..|+.+|.+ ++.++....... ..+.++.+|..+. ..-..+|+|+
T Consensus 4 ~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~-----~~~~~i~gd~~~~~~l~~a~i~~ad~vi 76 (153)
T 1id1_A 4 DHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG-----DNADVIPGDSNDSSVLKKAGIDRCRAIL 76 (153)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC-----TTCEEEESCTTSHHHHHHHTTTTCSEEE
T ss_pred CcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc-----CCCeEEEcCCCCHHHHHHcChhhCCEEE
Confidence 56777775 666655544 78899999997 454544443322 2378889998762 1235688888
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024021 180 DYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 180 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 213 (274)
+.- +++.....+....+.+.|...++...
T Consensus 77 ~~~-----~~d~~n~~~~~~a~~~~~~~~ii~~~ 105 (153)
T 1id1_A 77 ALS-----DNDADNAFVVLSAKDMSSDVKTVLAV 105 (153)
T ss_dssp ECS-----SCHHHHHHHHHHHHHHTSSSCEEEEC
T ss_pred Eec-----CChHHHHHHHHHHHHHCCCCEEEEEE
Confidence 532 22334455566677777777777654
No 337
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.95 E-value=0.031 Score=48.78 Aligned_cols=98 Identities=16% Similarity=0.146 Sum_probs=58.4
Q ss_pred CCCCeEEEEcCCc-chhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc---ccCC----CCCCCCee
Q 024021 107 LPKGRALVPGCGT-GYDVVAMAS-PER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA---DFFT----WCPTELFD 176 (274)
Q Consensus 107 ~~~~~vLDiG~G~-G~~~~~l~~-~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~---d~~~----~~~~~~~D 176 (274)
.++.+||=+|+|. |..+..+++ .|+ +|+++|.+++..+.+++.-.. .++.. |+.+ ......+|
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~-------~vi~~~~~~~~~~i~~~t~g~g~D 284 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGAD-------HVIDPTKENFVEAVLDYTNGLGAK 284 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCS-------EEECTTTSCHHHHHHHHTTTCCCS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCC-------EEEcCCCCCHHHHHHHHhCCCCCC
Confidence 4567899998754 455566665 788 999999999999998765311 11111 1111 12234699
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
+|+..-.-. .......++.+.++++++|.+++...
T Consensus 285 ~vid~~g~~---~~~~~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 285 LFLEATGVP---QLVWPQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp EEEECSSCH---HHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred EEEECCCCc---HHHHHHHHHHHHhccCCCcEEEEeCC
Confidence 999432211 01222333333455599999888643
No 338
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.92 E-value=0.04 Score=47.48 Aligned_cols=92 Identities=22% Similarity=0.227 Sum_probs=60.3
Q ss_pred CCCCCeEEEEcCCc-chhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc---ccCCCCCCCCeeEEEe
Q 024021 106 ALPKGRALVPGCGT-GYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA---DFFTWCPTELFDLIFD 180 (274)
Q Consensus 106 ~~~~~~vLDiG~G~-G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~---d~~~~~~~~~~D~v~~ 180 (274)
..++.+||-+|+|. |..+.++++ .|++|++++.+++.++.+++.-. + .++.. |..... .+.+|+|+.
T Consensus 192 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa-----~--~vi~~~~~~~~~~~-~~g~Dvvid 263 (369)
T 1uuf_A 192 AGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGA-----D--EVVNSRNADEMAAH-LKSFDFILN 263 (369)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTC-----S--EEEETTCHHHHHTT-TTCEEEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC-----c--EEeccccHHHHHHh-hcCCCEEEE
Confidence 34568999999874 666667766 78899999999998888876421 1 11211 111111 157999995
Q ss_pred cccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024021 181 YTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 181 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 213 (274)
.-.-. ..++...++|+++|.++...
T Consensus 264 ~~g~~--------~~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 264 TVAAP--------HNLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp CCSSC--------CCHHHHHTTEEEEEEEEECC
T ss_pred CCCCH--------HHHHHHHHHhccCCEEEEec
Confidence 43221 12466788999999988754
No 339
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=94.87 E-value=0.022 Score=44.34 Aligned_cols=90 Identities=20% Similarity=0.155 Sum_probs=57.7
Q ss_pred CCCCeEEEEcC--CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC---------CCCCCC
Q 024021 107 LPKGRALVPGC--GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT---------WCPTEL 174 (274)
Q Consensus 107 ~~~~~vLDiG~--G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~---------~~~~~~ 174 (274)
.++.+||..|+ |.|..+..++. .|++|+++|.+++..+.+++. +. . . .+ |..+ ......
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~----g~-~-~-~~--d~~~~~~~~~~~~~~~~~~ 107 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRL----GV-E-Y-VG--DSRSVDFADEILELTDGYG 107 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTT----CC-S-E-EE--ETTCSTHHHHHHHHTTTCC
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc----CC-C-E-Ee--eCCcHHHHHHHHHHhCCCC
Confidence 45689999995 44555555544 688999999998877766532 21 1 1 11 2221 112246
Q ss_pred eeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 175 FDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 175 ~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
+|+++.+.. . ..++...++|++||+++....
T Consensus 108 ~D~vi~~~g----~-----~~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 108 VDVVLNSLA----G-----EAIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp EEEEEECCC----T-----HHHHHHHHTEEEEEEEEECSC
T ss_pred CeEEEECCc----h-----HHHHHHHHHhccCCEEEEEcC
Confidence 999996432 1 246788899999999887543
No 340
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=94.79 E-value=0.12 Score=42.34 Aligned_cols=82 Identities=13% Similarity=0.126 Sum_probs=56.1
Q ss_pred eEEE-EcccCCCCCCCCeeEEEeccccccc--C-----h--hHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccC
Q 024021 159 VSFL-KADFFTWCPTELFDLIFDYTFFCAI--E-----P--EMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVS 228 (274)
Q Consensus 159 ~~~~-~~d~~~~~~~~~~D~v~~~~~~~~~--~-----~--~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~ 228 (274)
.++. .+|+..+...+++|+|++...-.+- . + .....+++...++|+|||.+++-.+...+. .
T Consensus 190 At~~~~lDfg~p~~~~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~KvyggaDr--------~ 261 (320)
T 2hwk_A 190 ATFRARLDLGIPGDVPKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGYADR--------A 261 (320)
T ss_dssp CSEECCGGGCSCTTSCCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCCCSH--------H
T ss_pred ceeecccccCCccccCcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecCCcc--------c
Confidence 4555 7888776555789999997543221 1 1 122346678889999999999998876432 3
Q ss_pred HHHHHHHHhcCCCcEEEEeec
Q 024021 229 VSDYEEVLQPMGFQAISIVDN 249 (274)
Q Consensus 229 ~~~~~~~l~~~Gf~~~~~~~~ 249 (274)
.+++...+++ -|+.+.+...
T Consensus 262 se~lv~~LaR-~F~~Vr~vKP 281 (320)
T 2hwk_A 262 SESIIGAIAR-QFKFSRVCKP 281 (320)
T ss_dssp HHHHHHHHHT-TEEEEEEECC
T ss_pred HHHHHHHHHH-hcceeeeeCC
Confidence 5777777777 4888777653
No 341
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=94.76 E-value=0.013 Score=50.44 Aligned_cols=93 Identities=16% Similarity=0.044 Sum_probs=61.5
Q ss_pred CCCCeEEEEcCCc-chhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-------CCCCCCeeE
Q 024021 107 LPKGRALVPGCGT-GYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-------WCPTELFDL 177 (274)
Q Consensus 107 ~~~~~vLDiG~G~-G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-------~~~~~~~D~ 177 (274)
.++.+||-+|+|. |..+..+++ .|++|++++.+++.++.+++.-. ...+..+..+ ......+|+
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa-------~~vi~~~~~~~~~~v~~~~~g~g~D~ 260 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGA-------DHGINRLEEDWVERVYALTGDRGADH 260 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTC-------SEEEETTTSCHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCC-------CEEEcCCcccHHHHHHHHhCCCCceE
Confidence 4568999999765 555666666 78899999999999988876531 1122211111 122347999
Q ss_pred EEecccccccChhHHHHHHHHHHhcccCCcEEEEEEcc
Q 024021 178 IFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFP 215 (274)
Q Consensus 178 v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~ 215 (274)
|+.... . ..+....++|+++|.+++....
T Consensus 261 vid~~g-~--------~~~~~~~~~l~~~G~iv~~G~~ 289 (363)
T 3uog_A 261 ILEIAG-G--------AGLGQSLKAVAPDGRISVIGVL 289 (363)
T ss_dssp EEEETT-S--------SCHHHHHHHEEEEEEEEEECCC
T ss_pred EEECCC-h--------HHHHHHHHHhhcCCEEEEEecC
Confidence 996433 1 1356778899999999887543
No 342
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=94.68 E-value=0.1 Score=44.21 Aligned_cols=94 Identities=16% Similarity=0.172 Sum_probs=62.0
Q ss_pred CCCCCeEEEEcCCc-chhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc---ccCCC--CCCCCeeEE
Q 024021 106 ALPKGRALVPGCGT-GYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA---DFFTW--CPTELFDLI 178 (274)
Q Consensus 106 ~~~~~~vLDiG~G~-G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~---d~~~~--~~~~~~D~v 178 (274)
..++.+||-.|+|. |..+..+++ .|++|+++|.+++..+.+++.-. + ..+.. |+.+. ...+.+|+|
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa-----~--~~i~~~~~~~~~~~~~~~g~~d~v 236 (340)
T 3s2e_A 164 TRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGA-----E--VAVNARDTDPAAWLQKEIGGAHGV 236 (340)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTC-----S--EEEETTTSCHHHHHHHHHSSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCC-----C--EEEeCCCcCHHHHHHHhCCCCCEE
Confidence 34568999999875 777777776 78899999999999998876421 1 11211 11110 011368998
Q ss_pred EecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 179 FDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 179 ~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
+.... . ...++...++|+++|.+++...
T Consensus 237 id~~g----~----~~~~~~~~~~l~~~G~iv~~G~ 264 (340)
T 3s2e_A 237 LVTAV----S----PKAFSQAIGMVRRGGTIALNGL 264 (340)
T ss_dssp EESSC----C----HHHHHHHHHHEEEEEEEEECSC
T ss_pred EEeCC----C----HHHHHHHHHHhccCCEEEEeCC
Confidence 85322 1 2356788899999999887543
No 343
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=94.65 E-value=0.25 Score=42.71 Aligned_cols=43 Identities=21% Similarity=0.155 Sum_probs=33.6
Q ss_pred CeEEEEcCCcchhHHHhhC---------CCCeEEEEeCChHHHHHHHHHhhc
Q 024021 110 GRALVPGCGTGYDVVAMAS---------PERYVVGLEISDIAIKKAEELSSS 152 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~~l~~---------~~~~v~~vD~~~~~~~~a~~~~~~ 152 (274)
..|+|+|+|.|.++..+++ ...+++.||+|+...+.-++++..
T Consensus 82 ~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 133 (387)
T 1zkd_A 82 LRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAG 133 (387)
T ss_dssp EEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTT
T ss_pred cEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcC
Confidence 4799999999999876653 223899999999988877666543
No 344
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=94.55 E-value=0.039 Score=47.56 Aligned_cols=97 Identities=16% Similarity=0.124 Sum_probs=62.1
Q ss_pred CCCCCeEEEEcCCc-chhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC---C---CCCCCee
Q 024021 106 ALPKGRALVPGCGT-GYDVVAMAS-PER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT---W---CPTELFD 176 (274)
Q Consensus 106 ~~~~~~vLDiG~G~-G~~~~~l~~-~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~---~---~~~~~~D 176 (274)
..++.+||-.|+|. |..+..+++ .|+ +|+++|.+++..+.+++.-... -+.....|+.+ . ...+.+|
T Consensus 180 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~----vi~~~~~~~~~~i~~~~~~~~gg~D 255 (370)
T 4ej6_A 180 IKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATA----TVDPSAGDVVEAIAGPVGLVPGGVD 255 (370)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSE----EECTTSSCHHHHHHSTTSSSTTCEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCE----EECCCCcCHHHHHHhhhhccCCCCC
Confidence 35668999999865 566666666 788 8999999999999888753110 01110112111 0 1223799
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
+|+..-.- ...++...++|++||.+++...
T Consensus 256 vvid~~G~--------~~~~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 256 VVIECAGV--------AETVKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp EEEECSCC--------HHHHHHHHHHEEEEEEEEECSC
T ss_pred EEEECCCC--------HHHHHHHHHHhccCCEEEEEec
Confidence 99953211 1356788899999999888653
No 345
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=94.42 E-value=0.21 Score=43.38 Aligned_cols=100 Identities=16% Similarity=0.120 Sum_probs=62.7
Q ss_pred CCCCCeEEEEcCCc-chhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcc----cCC----CCCCCC
Q 024021 106 ALPKGRALVPGCGT-GYDVVAMAS-PER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKAD----FFT----WCPTEL 174 (274)
Q Consensus 106 ~~~~~~vLDiG~G~-G~~~~~l~~-~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d----~~~----~~~~~~ 174 (274)
..++.+||-+|+|. |..+.++++ .|+ .|+++|.+++.++.+++.- .+.+... +.+ ......
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lG--------a~~i~~~~~~~~~~~v~~~t~g~g 254 (398)
T 1kol_A 183 VGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQG--------FEIADLSLDTPLHEQIAALLGEPE 254 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTT--------CEEEETTSSSCHHHHHHHHHSSSC
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcC--------CcEEccCCcchHHHHHHHHhCCCC
Confidence 34568999999865 667777776 787 7999999999999887542 1222211 111 112246
Q ss_pred eeEEEeccccccc-------ChhHHHHHHHHHHhcccCCcEEEEEE
Q 024021 175 FDLIFDYTFFCAI-------EPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 175 ~D~v~~~~~~~~~-------~~~~~~~~l~~~~~~L~pgG~~~~~~ 213 (274)
+|+|+..-.-... ........++...++|++||.+++..
T Consensus 255 ~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 255 VDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp EEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred CCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence 9999965332110 00001235678889999999987754
No 346
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=94.38 E-value=0.061 Score=43.94 Aligned_cols=81 Identities=15% Similarity=0.146 Sum_probs=55.2
Q ss_pred eEEEEcccCC---CCCCCCeeEEEeccccccc--------Ch----hHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCC
Q 024021 159 VSFLKADFFT---WCPTELFDLIFDYTFFCAI--------EP----EMRAAWAQKIKDFLKPDGELITLMFPISDHVGGP 223 (274)
Q Consensus 159 ~~~~~~d~~~---~~~~~~~D~v~~~~~~~~~--------~~----~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~ 223 (274)
.+++.+|..+ ..+.++||+|++...+..- .. .....++..+.++|+|||.+++....
T Consensus 5 ~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~~d-------- 76 (260)
T 1g60_A 5 NKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFNTP-------- 76 (260)
T ss_dssp SSEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEECH--------
T ss_pred CeEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEcCc--------
Confidence 4567888765 3456789999998887532 11 13467788889999999998886411
Q ss_pred CcccCHHHHHHHHhcCCCcEEEEeecc
Q 024021 224 PYKVSVSDYEEVLQPMGFQAISIVDNK 250 (274)
Q Consensus 224 ~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 250 (274)
.....+..++.+.||.......+.
T Consensus 77 ---~~~~~~~~~~~~~gf~~~~~iiW~ 100 (260)
T 1g60_A 77 ---FNCAFICQYLVSKGMIFQNWITWD 100 (260)
T ss_dssp ---HHHHHHHHHHHHTTCEEEEEEEEC
T ss_pred ---HHHHHHHHHHHhhccceeEEEEEE
Confidence 123456667888899877754443
No 347
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=94.16 E-value=0.24 Score=43.35 Aligned_cols=90 Identities=12% Similarity=0.058 Sum_probs=61.9
Q ss_pred CCeEEEEcCCcchhHHHhh----CCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-----CCCCCeeEEE
Q 024021 109 KGRALVPGCGTGYDVVAMA----SPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-----CPTELFDLIF 179 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~----~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~D~v~ 179 (274)
..+|+=+|+| .++..++ +.|..|+++|.+++.++.++.. .+.++.+|..+. ..-..+|+|+
T Consensus 4 ~~~viIiG~G--r~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~--------g~~vi~GDat~~~~L~~agi~~A~~vi 73 (413)
T 3l9w_A 4 GMRVIIAGFG--RFGQITGRLLLSSGVKMVVLDHDPDHIETLRKF--------GMKVFYGDATRMDLLESAGAAKAEVLI 73 (413)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHT--------TCCCEESCTTCHHHHHHTTTTTCSEEE
T ss_pred CCeEEEECCC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhC--------CCeEEEcCCCCHHHHHhcCCCccCEEE
Confidence 3578888875 4554444 3789999999999999888643 256788998872 2235688887
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024021 180 DYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 180 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 213 (274)
+. ++++.....+-...+.+.|+..+++-.
T Consensus 74 v~-----~~~~~~n~~i~~~ar~~~p~~~Iiara 102 (413)
T 3l9w_A 74 NA-----IDDPQTNLQLTEMVKEHFPHLQIIARA 102 (413)
T ss_dssp EC-----CSSHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred EC-----CCChHHHHHHHHHHHHhCCCCeEEEEE
Confidence 53 233444455566777788888877765
No 348
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=94.10 E-value=0.15 Score=43.43 Aligned_cols=94 Identities=17% Similarity=0.096 Sum_probs=60.9
Q ss_pred CCCCCeEEEEcCCc-chhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc----ccCC----CCC---C
Q 024021 106 ALPKGRALVPGCGT-GYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA----DFFT----WCP---T 172 (274)
Q Consensus 106 ~~~~~~vLDiG~G~-G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~----d~~~----~~~---~ 172 (274)
..++.+||-+|+|. |..+..+++ .|++|+++|.+++..+.+++.- . + ..+.. |..+ ... .
T Consensus 166 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lG----a-~--~~~~~~~~~~~~~~i~~~~~~~~g 238 (352)
T 1e3j_A 166 VQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCG----A-D--VTLVVDPAKEEESSIIERIRSAIG 238 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----C-S--EEEECCTTTSCHHHHHHHHHHHSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhC----C-C--EEEcCcccccHHHHHHHHhccccC
Confidence 34668999999864 566666666 7889999999999988887532 1 1 11211 1111 011 2
Q ss_pred CCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 173 ELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 173 ~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
..+|+|+..... ...++...++|+++|.++....
T Consensus 239 ~g~D~vid~~g~--------~~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 239 DLPNVTIDCSGN--------EKCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp SCCSEEEECSCC--------HHHHHHHHHHSCTTCEEEECSC
T ss_pred CCCCEEEECCCC--------HHHHHHHHHHHhcCCEEEEEec
Confidence 469999853321 1245778899999999887643
No 349
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=94.03 E-value=0.035 Score=47.34 Aligned_cols=92 Identities=17% Similarity=0.209 Sum_probs=59.8
Q ss_pred CCCeEEEEcCCc-chhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc---ccCC----CCCCCCeeE
Q 024021 108 PKGRALVPGCGT-GYDVVAMAS-PER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA---DFFT----WCPTELFDL 177 (274)
Q Consensus 108 ~~~~vLDiG~G~-G~~~~~l~~-~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~---d~~~----~~~~~~~D~ 177 (274)
++.+||-+|+|. |..+..+++ .|+ +|++++.+++..+.+++.-. + ..+.. |+.+ ......+|+
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga-----~--~~~~~~~~~~~~~v~~~~~g~g~D~ 239 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGA-----D--YVINPFEEDVVKEVMDITDGNGVDV 239 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTC-----S--EEECTTTSCHHHHHHHHTTTSCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCC-----C--EEECCCCcCHHHHHHHHcCCCCCCE
Confidence 678999999853 555566665 788 99999999998888875421 1 11111 1111 112246999
Q ss_pred EEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 178 IFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 178 v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
|+..-.. ...++...++|+++|.++....
T Consensus 240 vid~~g~--------~~~~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 240 FLEFSGA--------PKALEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp EEECSCC--------HHHHHHHHHHEEEEEEEEECCC
T ss_pred EEECCCC--------HHHHHHHHHHHhcCCEEEEEcc
Confidence 9954321 1346778899999999887543
No 350
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.88 E-value=0.44 Score=37.45 Aligned_cols=89 Identities=8% Similarity=-0.031 Sum_probs=57.4
Q ss_pred eEEEEcCCcchhHHHhhC----CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-----CCCCCeeEEEec
Q 024021 111 RALVPGCGTGYDVVAMAS----PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-----CPTELFDLIFDY 181 (274)
Q Consensus 111 ~vLDiG~G~G~~~~~l~~----~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~D~v~~~ 181 (274)
+|+=+|+ |..+..+++ .|..|+.+|.+++.++...+.. .+.++.+|..+. ..-..+|+|++.
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~-------~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 72 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL-------KATIIHGDGSHKEILRDAEVSKNDVVVIL 72 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS-------SSEEEESCTTSHHHHHHHTCCTTCEEEEC
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc-------CCeEEEcCCCCHHHHHhcCcccCCEEEEe
Confidence 4666665 666655544 7889999999999887655432 367889998762 123468988853
Q ss_pred ccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024021 182 TFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 182 ~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 213 (274)
.+++.....+..+.+.+.+...++...
T Consensus 73 -----~~~d~~n~~~~~~a~~~~~~~~iia~~ 99 (218)
T 3l4b_C 73 -----TPRDEVNLFIAQLVMKDFGVKRVVSLV 99 (218)
T ss_dssp -----CSCHHHHHHHHHHHHHTSCCCEEEECC
T ss_pred -----cCCcHHHHHHHHHHHHHcCCCeEEEEE
Confidence 233344455566666666666666543
No 351
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=93.87 E-value=0.075 Score=44.58 Aligned_cols=87 Identities=17% Similarity=0.166 Sum_probs=57.2
Q ss_pred CCCCeEEEEcCCc-chhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccc
Q 024021 107 LPKGRALVPGCGT-GYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFF 184 (274)
Q Consensus 107 ~~~~~vLDiG~G~-G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~ 184 (274)
.++.+||=.|+|. |..+.++++ .|++|++++ +++..+.+++.-. ..++ .| .+.. ...+|+|+..-.-
T Consensus 141 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lGa-------~~v~-~d-~~~v-~~g~Dvv~d~~g~ 209 (315)
T 3goh_A 141 TKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRGV-------RHLY-RE-PSQV-TQKYFAIFDAVNS 209 (315)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHTE-------EEEE-SS-GGGC-CSCEEEEECC---
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcCC-------CEEE-cC-HHHh-CCCccEEEECCCc
Confidence 4568999999853 666667766 788999999 9988888877431 1122 24 2222 5679999943211
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024021 185 CAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 185 ~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 213 (274)
+ .+....++|+++|.++...
T Consensus 210 -----~----~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 210 -----Q----NAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp -------------TTGGGEEEEEEEEEEC
T ss_pred -----h----hHHHHHHHhcCCCEEEEEe
Confidence 1 1256789999999988863
No 352
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=93.83 E-value=0.018 Score=49.01 Aligned_cols=92 Identities=13% Similarity=0.159 Sum_probs=59.3
Q ss_pred CCCCeEEEEcCC--cchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc---ccCC----CCCCCCee
Q 024021 107 LPKGRALVPGCG--TGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA---DFFT----WCPTELFD 176 (274)
Q Consensus 107 ~~~~~vLDiG~G--~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~---d~~~----~~~~~~~D 176 (274)
.++.+||-.|+| .|..+..+++ .|++|++++.+++.++.+++.-. + ..+.. |+.+ ......+|
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga-----~--~~~~~~~~~~~~~~~~~~~~~g~D 215 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGA-----A--YVIDTSTAPLYETVMELTNGIGAD 215 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTC-----S--EEEETTTSCHHHHHHHHTTTSCEE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCC-----c--EEEeCCcccHHHHHHHHhCCCCCc
Confidence 456899999987 5666666666 78899999999988888877421 1 11211 1111 12234799
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
+|+....- .. .....++|+++|.++....
T Consensus 216 vvid~~g~-----~~----~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 216 AAIDSIGG-----PD----GNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp EEEESSCH-----HH----HHHHHHTEEEEEEEEECCC
T ss_pred EEEECCCC-----hh----HHHHHHHhcCCCEEEEEee
Confidence 99853321 11 2334489999999888654
No 353
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=93.61 E-value=0.41 Score=46.54 Aligned_cols=126 Identities=12% Similarity=-0.004 Sum_probs=77.3
Q ss_pred CeEEEEcCCcchhHHHhhCCCC--eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEccc------------CC-----CC
Q 024021 110 GRALVPGCGTGYDVVAMASPER--YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADF------------FT-----WC 170 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~------------~~-----~~ 170 (274)
.+++|+-||.|.+..-+...|. .+.++|+++.+++..+.+.+ ...++.+|+ .+ ..
T Consensus 541 l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~p------~~~~~~~DI~~l~~~~~~~di~~~~~~~lp 614 (1002)
T 3swr_A 541 LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNP------GSTVFTEDCNILLKLVMAGETTNSRGQRLP 614 (1002)
T ss_dssp EEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHCT------TSEEECSCHHHHHHHHHHTCSBCTTCCBCC
T ss_pred CeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC------CCccccccHHHHhhhccchhhhhhhhhhcc
Confidence 5899999999999999988887 57899999999988888764 234454443 21 11
Q ss_pred CCCCeeEEEecccccccCh----------h----HHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHH
Q 024021 171 PTELFDLIFDYTFFCAIEP----------E----MRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVL 236 (274)
Q Consensus 171 ~~~~~D~v~~~~~~~~~~~----------~----~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 236 (274)
..+.+|+|+....-..++. + .+..+ -++.+.++|. +++.+....-.. .........+.+.|
T Consensus 615 ~~~~vDll~GGpPCQ~FS~ag~~~~~~~~d~R~~L~~~~-~riv~~~rPk--~~llENV~glls--~~~~~~~~~i~~~L 689 (1002)
T 3swr_A 615 QKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSF-LSYCDYYRPR--FFLLENVRNFVS--FKRSMVLKLTLRCL 689 (1002)
T ss_dssp CTTTCSEEEECCCCTTCCSSSCCCHHHHHHHTTSHHHHH-HHHHHHHCCS--EEEEEEEGGGGT--TGGGHHHHHHHHHH
T ss_pred cCCCeeEEEEcCCCcchhhhCCCCCCcccchhhHHHHHH-HHHHHHhCCC--EEEEeccHHHhc--cCcchHHHHHHHHH
Confidence 2347999998765443321 0 11222 3344556765 444443221100 00011356788888
Q ss_pred hcCCCcEEEE
Q 024021 237 QPMGFQAISI 246 (274)
Q Consensus 237 ~~~Gf~~~~~ 246 (274)
+..||.+.-.
T Consensus 690 ~~lGY~v~~~ 699 (1002)
T 3swr_A 690 VRMGYQCTFG 699 (1002)
T ss_dssp HHHTCEEEEE
T ss_pred HhcCCeEEEE
Confidence 8999987543
No 354
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=93.60 E-value=0.28 Score=41.39 Aligned_cols=94 Identities=12% Similarity=0.000 Sum_probs=60.4
Q ss_pred CCCCCeEEEEcC--CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc---ccCC---CCCCCCee
Q 024021 106 ALPKGRALVPGC--GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA---DFFT---WCPTELFD 176 (274)
Q Consensus 106 ~~~~~~vLDiG~--G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~---d~~~---~~~~~~~D 176 (274)
..++.+||-.|+ |.|..+..+++ .|++|++++.+++..+.+.+.+ +. ...+.. |+.+ ....+.+|
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~---g~---~~~~~~~~~~~~~~~~~~~~~~~d 220 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL---GF---DGAIDYKNEDLAAGLKRECPKGID 220 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT---CC---SEEEETTTSCHHHHHHHHCTTCEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CC---CEEEECCCHHHHHHHHHhcCCCce
Confidence 345689999998 45666666665 7889999999998888774332 11 111111 1111 01134699
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
+|+.+.. . ..+....++|+++|.+++...
T Consensus 221 ~vi~~~g-----~----~~~~~~~~~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 221 VFFDNVG-----G----EILDTVLTRIAFKARIVLCGA 249 (336)
T ss_dssp EEEESSC-----H----HHHHHHHTTEEEEEEEEECCC
T ss_pred EEEECCC-----c----chHHHHHHHHhhCCEEEEEee
Confidence 9985332 1 256788899999999887643
No 355
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=93.59 E-value=0.023 Score=48.04 Aligned_cols=92 Identities=14% Similarity=0.055 Sum_probs=60.7
Q ss_pred CCCCeEEEEcC--CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-------CCCCCCee
Q 024021 107 LPKGRALVPGC--GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-------WCPTELFD 176 (274)
Q Consensus 107 ~~~~~vLDiG~--G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-------~~~~~~~D 176 (274)
.++.+||-.|+ |.|..+..+++ .|++|++++.+++.++.+++.-. ...+..+-.+ ......+|
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga-------~~~~~~~~~~~~~~~~~~~~~~g~D 211 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGA-------WETIDYSHEDVAKRVLELTDGKKCP 211 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTC-------SEEEETTTSCHHHHHHHHTTTCCEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC-------CEEEeCCCccHHHHHHHHhCCCCce
Confidence 45679999883 45666666665 78899999999999988876421 1112211111 12234799
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
+|+....- ..+....++|+++|.+++...
T Consensus 212 vvid~~g~---------~~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 212 VVYDGVGQ---------DTWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp EEEESSCG---------GGHHHHHTTEEEEEEEEECCC
T ss_pred EEEECCCh---------HHHHHHHHHhcCCCEEEEEec
Confidence 99964331 135678899999999988654
No 356
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=93.56 E-value=0.25 Score=41.67 Aligned_cols=89 Identities=10% Similarity=0.078 Sum_probs=58.1
Q ss_pred ceEEE-EcccCC---CCCCCCeeEEEeccccccc------C---hhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCC
Q 024021 158 FVSFL-KADFFT---WCPTELFDLIFDYTFFCAI------E---PEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPP 224 (274)
Q Consensus 158 ~~~~~-~~d~~~---~~~~~~~D~v~~~~~~~~~------~---~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~ 224 (274)
...++ .+|..+ ..+.++||+|++...+..- . .......+..+.++|+|||.+++..-.... +..
T Consensus 38 ~~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~~~~---~~~ 114 (319)
T 1eg2_A 38 TRHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGLQYQ---GEA 114 (319)
T ss_dssp EEEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECSCCC---CCT
T ss_pred cceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCcccc---ccc
Confidence 46677 899876 4556789999999887532 1 124567788889999999999886532211 001
Q ss_pred cccCHHHHHHHHhcCC-CcEEEEeec
Q 024021 225 YKVSVSDYEEVLQPMG-FQAISIVDN 249 (274)
Q Consensus 225 ~~~~~~~~~~~l~~~G-f~~~~~~~~ 249 (274)
.......+...+...| |.......+
T Consensus 115 ~~~~l~~l~~~i~~~G~~~~~~~IIW 140 (319)
T 1eg2_A 115 GSGDLISIISHMRQNSKMLLANLIIW 140 (319)
T ss_dssp TBCCHHHHHHHHHHHCCCEEEEEEEE
T ss_pred ccccHHHHHHHHhCcccceeEEEEEE
Confidence 1123456667777777 887765443
No 357
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=93.53 E-value=0.093 Score=44.61 Aligned_cols=92 Identities=14% Similarity=0.129 Sum_probs=61.0
Q ss_pred CCCeEEEEcCCc-chhHHHhhC-C--CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEE----cccCC-CCCCCCeeEE
Q 024021 108 PKGRALVPGCGT-GYDVVAMAS-P--ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLK----ADFFT-WCPTELFDLI 178 (274)
Q Consensus 108 ~~~~vLDiG~G~-G~~~~~l~~-~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~----~d~~~-~~~~~~~D~v 178 (274)
++.+||-+|+|. |..+.++++ . |++|++++.+++..+.+++.-. + .++. .|... ......+|+|
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa-----~--~vi~~~~~~~~~~~~~~g~g~D~v 242 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGA-----D--YVSEMKDAESLINKLTDGLGASIA 242 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTC-----S--EEECHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCC-----C--EEeccccchHHHHHhhcCCCccEE
Confidence 678999999864 556666666 5 8999999999999988876421 1 1111 11111 1113379999
Q ss_pred EecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 179 FDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 179 ~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
+..-.- ...++...++|+++|.++....
T Consensus 243 id~~g~--------~~~~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 243 IDLVGT--------EETTYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp EESSCC--------HHHHHHHHHHEEEEEEEEECCC
T ss_pred EECCCC--------hHHHHHHHHHhhcCCEEEEeCC
Confidence 954321 1346788899999999887543
No 358
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=93.48 E-value=0.3 Score=41.11 Aligned_cols=89 Identities=19% Similarity=0.113 Sum_probs=58.2
Q ss_pred CCCCeEEEEcC--CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC---------CCCCCC
Q 024021 107 LPKGRALVPGC--GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT---------WCPTEL 174 (274)
Q Consensus 107 ~~~~~vLDiG~--G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~---------~~~~~~ 174 (274)
.++.+||-.|+ |.|..+..+++ .|++|+++|.+++.++.+++. +. .. .+ |..+ ....+.
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~----g~--~~-~~--d~~~~~~~~~~~~~~~~~~ 214 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQI----GF--DA-AF--NYKTVNSLEEALKKASPDG 214 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----TC--SE-EE--ETTSCSCHHHHHHHHCTTC
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc----CC--cE-EE--ecCCHHHHHHHHHHHhCCC
Confidence 45689999997 55555555554 788999999999888887433 11 11 11 2221 001246
Q ss_pred eeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024021 175 FDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 175 ~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 213 (274)
+|+++.+..- ..+....++|++||.+++..
T Consensus 215 ~d~vi~~~g~---------~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 215 YDCYFDNVGG---------EFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp EEEEEESSCH---------HHHHHHHTTEEEEEEEEECC
T ss_pred CeEEEECCCh---------HHHHHHHHHHhcCCEEEEEe
Confidence 9999854331 23577889999999988754
No 359
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=93.39 E-value=0.028 Score=47.71 Aligned_cols=92 Identities=15% Similarity=0.083 Sum_probs=60.1
Q ss_pred CCCCeEEEEcC--CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-------CCCCCCee
Q 024021 107 LPKGRALVPGC--GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-------WCPTELFD 176 (274)
Q Consensus 107 ~~~~~vLDiG~--G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-------~~~~~~~D 176 (274)
.++.+||-.|+ |.|..+..+++ .|++|++++.+++.++.+++.-. ...+..+-.+ ......+|
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga-------~~~~~~~~~~~~~~~~~~~~~~g~D 219 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGA-------EYLINASKEDILRQVLKFTNGKGVD 219 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC-------SEEEETTTSCHHHHHHHHTTTSCEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC-------cEEEeCCCchHHHHHHHHhCCCCce
Confidence 45689999984 45566666665 78899999999998888866421 1122211111 12234699
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
+|+....- ..++...++|+++|.++....
T Consensus 220 ~vid~~g~---------~~~~~~~~~l~~~G~iv~~G~ 248 (334)
T 3qwb_A 220 ASFDSVGK---------DTFEISLAALKRKGVFVSFGN 248 (334)
T ss_dssp EEEECCGG---------GGHHHHHHHEEEEEEEEECCC
T ss_pred EEEECCCh---------HHHHHHHHHhccCCEEEEEcC
Confidence 99964331 235678889999999888643
No 360
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=93.16 E-value=1.3 Score=35.62 Aligned_cols=107 Identities=14% Similarity=0.121 Sum_probs=68.3
Q ss_pred CCCCeEEEEcCC--cch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC----------
Q 024021 107 LPKGRALVPGCG--TGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP---------- 171 (274)
Q Consensus 107 ~~~~~vLDiG~G--~G~---~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~---------- 171 (274)
..++++|=.|++ .|. .+..|++.|++|+.++.++...+.+.+.....+ ..++.++.+|+.+...
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLD-RNDSIILPCDVTNDAEIETCFASIKE 83 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSS-SCCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcC-CCCceEEeCCCCCHHHHHHHHHHHHH
Confidence 456788888876 332 345666689999999988765555555544433 1368999999987321
Q ss_pred -CCCeeEEEecccccc----------cChhHHH-----------HHHHHHHhcccCCcEEEEEEc
Q 024021 172 -TELFDLIFDYTFFCA----------IEPEMRA-----------AWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 172 -~~~~D~v~~~~~~~~----------~~~~~~~-----------~~l~~~~~~L~pgG~~~~~~~ 214 (274)
.+.+|+++.+..+.. .+.+... .+++.+...++++|.++.+..
T Consensus 84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 148 (266)
T 3oig_A 84 QVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTY 148 (266)
T ss_dssp HHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred HhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEec
Confidence 136899887754322 2223222 345667777888888777653
No 361
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=93.03 E-value=1.2 Score=36.25 Aligned_cols=105 Identities=13% Similarity=0.135 Sum_probs=67.4
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCC------------hHHHHHHHHHhhcCCCCcceEEEEcccCCCCC
Q 024021 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEIS------------DIAIKKAEELSSSLPNAKFVSFLKADFFTWCP 171 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~vD~~------------~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 171 (274)
..++++|=.|++.|. .+..|++.|++|+.+|.+ .+.++.+.......+ .++.++.+|+.+...
T Consensus 8 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~ 85 (287)
T 3pxx_A 8 VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG--RKAYTAEVDVRDRAA 85 (287)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT--SCEEEEECCTTCHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC--CceEEEEccCCCHHH
Confidence 446788888876653 234555689999999987 666666555554443 568999999987211
Q ss_pred -----------CCCeeEEEecccccc----cChhHH-----------HHHHHHHHhcccCCcEEEEEE
Q 024021 172 -----------TELFDLIFDYTFFCA----IEPEMR-----------AAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 172 -----------~~~~D~v~~~~~~~~----~~~~~~-----------~~~l~~~~~~L~pgG~~~~~~ 213 (274)
.++.|+++.+..+.. .+.+.+ ..+++.+...++.+|.++...
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 153 (287)
T 3pxx_A 86 VSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTG 153 (287)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence 136899998755432 222322 234456667777788877654
No 362
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=93.02 E-value=0.65 Score=39.25 Aligned_cols=90 Identities=14% Similarity=0.134 Sum_probs=60.7
Q ss_pred CCCCeEEEEcC--CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC---------CCCCCC
Q 024021 107 LPKGRALVPGC--GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT---------WCPTEL 174 (274)
Q Consensus 107 ~~~~~vLDiG~--G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~---------~~~~~~ 174 (274)
.++.+||-.|+ |.|..+..+++ .|++|++++.+++.++.+++.- . . ..+ |..+ ......
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g----a-~--~~~--d~~~~~~~~~~~~~~~~~~ 235 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALG----A-D--ETV--NYTHPDWPKEVRRLTGGKG 235 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHT----C-S--EEE--ETTSTTHHHHHHHHTTTTC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcC----C-C--EEE--cCCcccHHHHHHHHhCCCC
Confidence 45689999998 56777766665 7889999999999888886532 1 1 112 2221 112247
Q ss_pred eeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 175 FDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 175 ~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
+|+|+.... . ..++.+.++|+++|.++....
T Consensus 236 ~d~vi~~~g-~--------~~~~~~~~~l~~~G~~v~~g~ 266 (343)
T 2eih_A 236 ADKVVDHTG-A--------LYFEGVIKATANGGRIAIAGA 266 (343)
T ss_dssp EEEEEESSC-S--------SSHHHHHHHEEEEEEEEESSC
T ss_pred ceEEEECCC-H--------HHHHHHHHhhccCCEEEEEec
Confidence 999996543 2 135677889999999887543
No 363
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=93.00 E-value=2.2 Score=34.58 Aligned_cols=74 Identities=20% Similarity=0.195 Sum_probs=54.7
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-----------C
Q 024021 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP-----------T 172 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-----------~ 172 (274)
++++.+|=-|++.|. .+..|++.|++|+.+|.+++.++...+.+...+ .++.++.+|+.+... -
T Consensus 5 L~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g--~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMG--KEVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 457888888887774 245556689999999999999888887776655 468899999976211 1
Q ss_pred CCeeEEEecc
Q 024021 173 ELFDLIFDYT 182 (274)
Q Consensus 173 ~~~D~v~~~~ 182 (274)
++.|+++.+.
T Consensus 83 G~iDiLVNNA 92 (254)
T 4fn4_A 83 SRIDVLCNNA 92 (254)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 4677777664
No 364
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=92.93 E-value=0.27 Score=42.38 Aligned_cols=93 Identities=18% Similarity=0.088 Sum_probs=59.4
Q ss_pred CCCCeEEEEcCCc-chhHHHhhC-CC-CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc------ccCC----CCCCC
Q 024021 107 LPKGRALVPGCGT-GYDVVAMAS-PE-RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA------DFFT----WCPTE 173 (274)
Q Consensus 107 ~~~~~vLDiG~G~-G~~~~~l~~-~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~------d~~~----~~~~~ 173 (274)
.++.+||-+|+|. |..+..+++ .| .+|++++.+++.++.+++.- . ..++.. |+.+ .....
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lG----a---~~vi~~~~~~~~~~~~~v~~~~~g~ 266 (380)
T 1vj0_A 194 FAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIG----A---DLTLNRRETSVEERRKAIMDITHGR 266 (380)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTT----C---SEEEETTTSCHHHHHHHHHHHTTTS
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcC----C---cEEEeccccCcchHHHHHHHHhCCC
Confidence 4567999999653 555566666 78 59999999999988887532 1 112221 1111 12233
Q ss_pred CeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 174 LFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 174 ~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
.+|+|+..-.. ...+....++|+++|.++....
T Consensus 267 g~Dvvid~~g~--------~~~~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 267 GADFILEATGD--------SRALLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp CEEEEEECSSC--------TTHHHHHHHHEEEEEEEEECCC
T ss_pred CCcEEEECCCC--------HHHHHHHHHHHhcCCEEEEEec
Confidence 69999954321 1245678899999999887643
No 365
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=92.93 E-value=0.23 Score=43.52 Aligned_cols=43 Identities=16% Similarity=0.113 Sum_probs=33.8
Q ss_pred CCeEEEEcCCcchhHHHhhC----C---CCeEEEEeCChHHHHHHHHHhh
Q 024021 109 KGRALVPGCGTGYDVVAMAS----P---ERYVVGLEISDIAIKKAEELSS 151 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~~----~---~~~v~~vD~~~~~~~~a~~~~~ 151 (274)
+.+|+|+|+|+|.++..+++ . ..+++.||+|+...+.-++++.
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 187 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLG 187 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHh
Confidence 46999999999998876654 1 2389999999988777776654
No 366
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=92.91 E-value=0.29 Score=41.50 Aligned_cols=92 Identities=16% Similarity=0.136 Sum_probs=60.1
Q ss_pred CCCCeEEEEcC--CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcc--cCC----CCCCCCeeE
Q 024021 107 LPKGRALVPGC--GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKAD--FFT----WCPTELFDL 177 (274)
Q Consensus 107 ~~~~~vLDiG~--G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d--~~~----~~~~~~~D~ 177 (274)
.++.+||-.|+ |.|..+..+++ .|++|++++.+++..+.+++.-. ..++..+ +.+ ......+|+
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga-------~~v~~~~~~~~~~v~~~~~~~g~Dv 230 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGA-------DIVLPLEEGWAKAVREATGGAGVDM 230 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTC-------SEEEESSTTHHHHHHHHTTTSCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC-------cEEecCchhHHHHHHHHhCCCCceE
Confidence 45689999997 45666666666 78899999999988888877421 1122222 111 122346999
Q ss_pred EEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 178 IFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 178 v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
|+....- ..+....++|+++|.+++...
T Consensus 231 vid~~g~---------~~~~~~~~~l~~~G~iv~~G~ 258 (342)
T 4eye_A 231 VVDPIGG---------PAFDDAVRTLASEGRLLVVGF 258 (342)
T ss_dssp EEESCC-----------CHHHHHHTEEEEEEEEEC--
T ss_pred EEECCch---------hHHHHHHHhhcCCCEEEEEEc
Confidence 9964331 135678889999999887643
No 367
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=92.90 E-value=0.17 Score=43.23 Aligned_cols=95 Identities=14% Similarity=0.106 Sum_probs=59.7
Q ss_pred CCCCCeEEEEcCCc-chhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc----ccCCCCCCCCeeEEE
Q 024021 106 ALPKGRALVPGCGT-GYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA----DFFTWCPTELFDLIF 179 (274)
Q Consensus 106 ~~~~~~vLDiG~G~-G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~----d~~~~~~~~~~D~v~ 179 (274)
..++.+||-+|+|. |..+..+++ .|++|++++.+++.++.+++.-. ..++.. |+.+... +.+|+|+
T Consensus 177 ~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa-------~~v~~~~~~~~~~~~~~-~~~D~vi 248 (360)
T 1piw_A 177 CGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGA-------DHYIATLEEGDWGEKYF-DTFDLIV 248 (360)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTC-------SEEEEGGGTSCHHHHSC-SCEEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCC-------CEEEcCcCchHHHHHhh-cCCCEEE
Confidence 34568999999853 555666666 78899999999988888876421 112221 1111111 4799999
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 180 DYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 180 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
..-... +. ..++...++|++||.++....
T Consensus 249 d~~g~~--~~----~~~~~~~~~l~~~G~iv~~g~ 277 (360)
T 1piw_A 249 VCASSL--TD----IDFNIMPKAMKVGGRIVSISI 277 (360)
T ss_dssp ECCSCS--TT----CCTTTGGGGEEEEEEEEECCC
T ss_pred ECCCCC--cH----HHHHHHHHHhcCCCEEEEecC
Confidence 653320 00 123567789999999887543
No 368
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=92.73 E-value=0.54 Score=39.75 Aligned_cols=93 Identities=15% Similarity=0.075 Sum_probs=60.0
Q ss_pred CCCCeEEEEcC--CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc----ccCC---CCCCCCee
Q 024021 107 LPKGRALVPGC--GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA----DFFT---WCPTELFD 176 (274)
Q Consensus 107 ~~~~~vLDiG~--G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~----d~~~---~~~~~~~D 176 (274)
.++.+||-.|+ |.|..+..+++ .|++|++++.+++.++.+++.+ +. . ..+.. ++.+ ....+.+|
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~---g~-~--~~~d~~~~~~~~~~~~~~~~~~~d 227 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF---GF-D--DAFNYKEESDLTAALKRCFPNGID 227 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS---CC-S--EEEETTSCSCSHHHHHHHCTTCEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CC-c--eEEecCCHHHHHHHHHHHhCCCCc
Confidence 45689999997 56666666665 7889999999998888876433 11 1 11111 1111 00124699
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
+|+....- ..+....++|++||.+++...
T Consensus 228 ~vi~~~g~---------~~~~~~~~~l~~~G~~v~~G~ 256 (345)
T 2j3h_A 228 IYFENVGG---------KMLDAVLVNMNMHGRIAVCGM 256 (345)
T ss_dssp EEEESSCH---------HHHHHHHTTEEEEEEEEECCC
T ss_pred EEEECCCH---------HHHHHHHHHHhcCCEEEEEcc
Confidence 99854321 246788899999999887543
No 369
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=92.59 E-value=0.93 Score=33.69 Aligned_cols=98 Identities=14% Similarity=0.073 Sum_probs=57.0
Q ss_pred CCCCCeEEEEcCCcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC------CCCeeE
Q 024021 106 ALPKGRALVPGCGTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP------TELFDL 177 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~------~~~~D~ 177 (274)
.....-|||+|-|.|..--.+.+ ++.+|+++|-.-..- +. -..+.-.++.+|+.+..+ ..+.-+
T Consensus 38 ~~~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~h-------p~-~~P~~e~~ilGdi~~tL~~~~~r~g~~a~L 109 (174)
T 3iht_A 38 AGLSGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVASH-------PD-STPPEAQLILGDIRETLPATLERFGATASL 109 (174)
T ss_dssp TTCCSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCCC-------GG-GCCCGGGEEESCHHHHHHHHHHHHCSCEEE
T ss_pred cCCCCceEEecCCCChhHHHHHHhCCCCcEEEEEeeeccC-------CC-CCCchHheecccHHHHHHHHHHhcCCceEE
Confidence 33457899999999999988888 888999999731100 00 011234677787776322 222333
Q ss_pred EEecccccccCh--hHHHHHHHHHHhcccCCcEEEE
Q 024021 178 IFDYTFFCAIEP--EMRAAWAQKIKDFLKPDGELIT 211 (274)
Q Consensus 178 v~~~~~~~~~~~--~~~~~~l~~~~~~L~pgG~~~~ 211 (274)
+.+..-.++-.. .....+-..+..+|.|||+++.
T Consensus 110 aHaD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS 145 (174)
T 3iht_A 110 VHADLGGHNREKNDRFARLISPLIEPHLAQGGLMVS 145 (174)
T ss_dssp EEECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred EEeecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEe
Confidence 332222221111 1122333556788999998876
No 370
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=92.56 E-value=1.1 Score=42.53 Aligned_cols=42 Identities=10% Similarity=-0.030 Sum_probs=35.3
Q ss_pred CeEEEEcCCcchhHHHhhCCC------C-eEEEEeCChHHHHHHHHHhh
Q 024021 110 GRALVPGCGTGYDVVAMASPE------R-YVVGLEISDIAIKKAEELSS 151 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~~l~~~~------~-~v~~vD~~~~~~~~a~~~~~ 151 (274)
.+|+|+-||.|+++.-+...| + .+.++|+++.+++--+.|.+
T Consensus 213 ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp 261 (784)
T 4ft4_B 213 ATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHP 261 (784)
T ss_dssp EEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCT
T ss_pred CeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCC
Confidence 689999999999998776644 3 57899999999988888864
No 371
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=92.54 E-value=1.7 Score=35.73 Aligned_cols=105 Identities=16% Similarity=0.126 Sum_probs=66.8
Q ss_pred CCCCeEEEEcCCcc-----hhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC-----------
Q 024021 107 LPKGRALVPGCGTG-----YDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC----------- 170 (274)
Q Consensus 107 ~~~~~vLDiG~G~G-----~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~----------- 170 (274)
..++++|=.|++.| ..+..|++.|++|+.++.++...+.+++..... .++.++.+|+.+..
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEEL---GAFVAGHCDVADAASIDAVFETLEK 105 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHH---TCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc---CCceEEECCCCCHHHHHHHHHHHHH
Confidence 45678999987633 234556668999999999876555555444333 25888999998721
Q ss_pred CCCCeeEEEeccccc----------ccChhHH-----------HHHHHHHHhcccCCcEEEEEEc
Q 024021 171 PTELFDLIFDYTFFC----------AIEPEMR-----------AAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 171 ~~~~~D~v~~~~~~~----------~~~~~~~-----------~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
..++.|+++.+..+. ..+.+.+ ..+++.+...++.+|.|+.+..
T Consensus 106 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS 170 (293)
T 3grk_A 106 KWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTY 170 (293)
T ss_dssp HTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred hcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEee
Confidence 114789999875433 1222322 2344566677777888777653
No 372
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=92.52 E-value=0.58 Score=34.53 Aligned_cols=93 Identities=15% Similarity=0.170 Sum_probs=52.1
Q ss_pred CCCCeEEEEcCCcchhHHHh----hCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC---C--CCCCCeeE
Q 024021 107 LPKGRALVPGCGTGYDVVAM----ASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT---W--CPTELFDL 177 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l----~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~---~--~~~~~~D~ 177 (274)
.++.+|+=+|+| ..+..+ ...|.+|+++|.+++.++.++. . ....++.+|..+ . .....+|+
T Consensus 17 ~~~~~v~IiG~G--~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~----~g~~~~~~d~~~~~~l~~~~~~~ad~ 87 (155)
T 2g1u_A 17 QKSKYIVIFGCG--RLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---E----FSGFTVVGDAAEFETLKECGMEKADM 87 (155)
T ss_dssp CCCCEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---T----CCSEEEESCTTSHHHHHTTTGGGCSE
T ss_pred cCCCcEEEECCC--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---c----CCCcEEEecCCCHHHHHHcCcccCCE
Confidence 456799999875 444333 3478899999998875443321 1 124556666543 1 11246898
Q ss_pred EEecccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024021 178 IFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 178 v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 213 (274)
|+..-. .+.....+..+.+.+.+...++...
T Consensus 88 Vi~~~~-----~~~~~~~~~~~~~~~~~~~~iv~~~ 118 (155)
T 2g1u_A 88 VFAFTN-----DDSTNFFISMNARYMFNVENVIARV 118 (155)
T ss_dssp EEECSS-----CHHHHHHHHHHHHHTSCCSEEEEEC
T ss_pred EEEEeC-----CcHHHHHHHHHHHHHCCCCeEEEEE
Confidence 885422 2222334444555555555655544
No 373
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=92.39 E-value=0.17 Score=42.96 Aligned_cols=94 Identities=16% Similarity=0.208 Sum_probs=62.0
Q ss_pred CCCCCeEEEEcCCc-chhHHHhhC-C-CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc--ccCC----CCCCCCee
Q 024021 106 ALPKGRALVPGCGT-GYDVVAMAS-P-ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA--DFFT----WCPTELFD 176 (274)
Q Consensus 106 ~~~~~~vLDiG~G~-G~~~~~l~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~--d~~~----~~~~~~~D 176 (274)
..++.+||-+|+|. |..+.++++ . +.+|+++|.+++..+.+++.-. + .++.. |..+ ......+|
T Consensus 169 ~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa-----~--~~i~~~~~~~~~v~~~t~g~g~d 241 (345)
T 3jv7_A 169 LGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGA-----D--AAVKSGAGAADAIRELTGGQGAT 241 (345)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTC-----S--EEEECSTTHHHHHHHHHGGGCEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCC-----C--EEEcCCCcHHHHHHHHhCCCCCe
Confidence 35568999999865 666677776 4 6799999999999998876421 1 11211 1111 11223799
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
+|+..-. . ...++...++|+++|.+++...
T Consensus 242 ~v~d~~G-----~---~~~~~~~~~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 242 AVFDFVG-----A---QSTIDTAQQVVAVDGHISVVGI 271 (345)
T ss_dssp EEEESSC-----C---HHHHHHHHHHEEEEEEEEECSC
T ss_pred EEEECCC-----C---HHHHHHHHHHHhcCCEEEEECC
Confidence 9995322 1 2356788899999999987654
No 374
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=92.29 E-value=0.063 Score=46.35 Aligned_cols=93 Identities=15% Similarity=0.182 Sum_probs=59.8
Q ss_pred CCCCeEEEEcCCc-chhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc-----ccCC---CCCCCCe
Q 024021 107 LPKGRALVPGCGT-GYDVVAMAS-PER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA-----DFFT---WCPTELF 175 (274)
Q Consensus 107 ~~~~~vLDiG~G~-G~~~~~l~~-~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~-----d~~~---~~~~~~~ 175 (274)
.++.+||=+|+|. |..+..+++ .|+ +|+++|.+++.++.+++.- . ...+.. |+.+ ....+.+
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lG----a---~~vi~~~~~~~~~~~~i~~~~~gg~ 264 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFG----V---NEFVNPKDHDKPIQEVIVDLTDGGV 264 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTT----C---CEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcC----C---cEEEccccCchhHHHHHHHhcCCCC
Confidence 4567999999863 666666666 687 8999999999888886532 1 112211 1111 0112379
Q ss_pred eEEEecccccccChhHHHHHHHHHHhcccCC-cEEEEEEc
Q 024021 176 DLIFDYTFFCAIEPEMRAAWAQKIKDFLKPD-GELITLMF 214 (274)
Q Consensus 176 D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~~~~~~~ 214 (274)
|+|+..-. . ...++...++|++| |++++...
T Consensus 265 D~vid~~g-----~---~~~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 265 DYSFECIG-----N---VSVMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp SEEEECSC-----C---HHHHHHHHHTBCTTTCEEEECSC
T ss_pred CEEEECCC-----C---HHHHHHHHHHhhccCCEEEEEcc
Confidence 99995322 1 23567888999997 99887654
No 375
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=92.27 E-value=0.95 Score=36.46 Aligned_cols=102 Identities=15% Similarity=0.123 Sum_probs=66.7
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-----------C
Q 024021 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP-----------T 172 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-----------~ 172 (274)
..++++|=.|++.|. .+..|++.|++|+.++.+++.++...+... .++.++.+|+.+... .
T Consensus 6 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (255)
T 4eso_A 6 YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFG-----PRVHALRSDIADLNEIAVLGAAAGQTL 80 (255)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-----GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-----CcceEEEccCCCHHHHHHHHHHHHHHh
Confidence 456788888876653 234555589999999999887776665542 468999999987211 1
Q ss_pred CCeeEEEecccccc------cChhHHH-----------HHHHHHHhcccCCcEEEEEE
Q 024021 173 ELFDLIFDYTFFCA------IEPEMRA-----------AWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 173 ~~~D~v~~~~~~~~------~~~~~~~-----------~~l~~~~~~L~pgG~~~~~~ 213 (274)
++.|+++.+..... .+.+.+. .+.+.+...++++|.++...
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 138 (255)
T 4eso_A 81 GAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTS 138 (255)
T ss_dssp SSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEEC
Confidence 47899997754322 2333322 23455666677788777654
No 376
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=92.21 E-value=0.15 Score=43.69 Aligned_cols=93 Identities=22% Similarity=0.133 Sum_probs=61.1
Q ss_pred CCCCCeEEEEc--CCcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc---ccCC---CCCCCCee
Q 024021 106 ALPKGRALVPG--CGTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA---DFFT---WCPTELFD 176 (274)
Q Consensus 106 ~~~~~~vLDiG--~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~---d~~~---~~~~~~~D 176 (274)
..++.+||-.| .|.|..+..+++ .|++|++++.+++.++.+++.- . + ..+.. |+.+ ......+|
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~G----a-~--~~~~~~~~~~~~~~~~~~~~g~D 233 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLG----C-D--RPINYKTEPVGTVLKQEYPEGVD 233 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT----C-S--EEEETTTSCHHHHHHHHCTTCEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcC----C-c--EEEecCChhHHHHHHHhcCCCCC
Confidence 34568999999 456777777766 7889999999998888887631 1 1 11211 1111 01124699
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
+|+....- ..++.+.++|+++|.++....
T Consensus 234 ~vid~~g~---------~~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 234 VVYESVGG---------AMFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp EEEECSCT---------HHHHHHHHHEEEEEEEEECCC
T ss_pred EEEECCCH---------HHHHHHHHHHhcCCEEEEEeC
Confidence 99954321 246778899999999887653
No 377
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=92.21 E-value=0.47 Score=40.41 Aligned_cols=87 Identities=25% Similarity=0.242 Sum_probs=57.3
Q ss_pred CeEEEEcCCc-chhH-HHhh-C-CCCe-EEEEeCChH---HHHHHHHHhhcCCCCcceEEEEcccCCCCC------CCCe
Q 024021 110 GRALVPGCGT-GYDV-VAMA-S-PERY-VVGLEISDI---AIKKAEELSSSLPNAKFVSFLKADFFTWCP------TELF 175 (274)
Q Consensus 110 ~~vLDiG~G~-G~~~-~~l~-~-~~~~-v~~vD~~~~---~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~------~~~~ 175 (274)
.+||-+|+|. |..+ .+++ + .|++ |++++.+++ ..+.+++.- .+.+ |..+... .+.+
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lG--------a~~v--~~~~~~~~~i~~~~gg~ 243 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELD--------ATYV--DSRQTPVEDVPDVYEQM 243 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTT--------CEEE--ETTTSCGGGHHHHSCCE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcC--------Cccc--CCCccCHHHHHHhCCCC
Confidence 8999999743 6666 7777 6 6886 999999887 788876532 1222 2221100 1379
Q ss_pred eEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 176 DLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 176 D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
|+|+..-.- ...++...++|+++|.++....
T Consensus 244 Dvvid~~g~--------~~~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 244 DFIYEATGF--------PKHAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp EEEEECSCC--------HHHHHHHHHHEEEEEEEEECCC
T ss_pred CEEEECCCC--------hHHHHHHHHHHhcCCEEEEEeC
Confidence 999843221 1346788899999999887643
No 378
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=92.17 E-value=0.1 Score=44.97 Aligned_cols=93 Identities=12% Similarity=0.146 Sum_probs=59.6
Q ss_pred CCCCeEEEEcCCc-chhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcc-----cCC---CCCCCCe
Q 024021 107 LPKGRALVPGCGT-GYDVVAMAS-PER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKAD-----FFT---WCPTELF 175 (274)
Q Consensus 107 ~~~~~vLDiG~G~-G~~~~~l~~-~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d-----~~~---~~~~~~~ 175 (274)
.++.+||-+|+|. |..+..+++ .|+ +|+++|.+++.++.+++.-. + ..+..+ +.+ ....+.+
T Consensus 191 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa-----~--~vi~~~~~~~~~~~~~~~~~~~g~ 263 (374)
T 1cdo_A 191 EPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGA-----T--DFVNPNDHSEPISQVLSKMTNGGV 263 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC-----C--EEECGGGCSSCHHHHHHHHHTSCB
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCC-----c--eEEeccccchhHHHHHHHHhCCCC
Confidence 4567999999764 556666666 788 89999999998888875321 1 112111 111 0011369
Q ss_pred eEEEecccccccChhHHHHHHHHHHhcccCC-cEEEEEEc
Q 024021 176 DLIFDYTFFCAIEPEMRAAWAQKIKDFLKPD-GELITLMF 214 (274)
Q Consensus 176 D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~~~~~~~ 214 (274)
|+|+..-.. ...+....++|+++ |.+++...
T Consensus 264 D~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 264 DFSLECVGN--------VGVMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp SEEEECSCC--------HHHHHHHHHTBCTTTCEEEECSC
T ss_pred CEEEECCCC--------HHHHHHHHHHhhcCCcEEEEEcC
Confidence 999853221 13467888999999 99887543
No 379
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=92.14 E-value=0.029 Score=47.81 Aligned_cols=89 Identities=13% Similarity=0.157 Sum_probs=57.3
Q ss_pred CCCeEEEEcCCc-chhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc---ccCC----CCCCCCeeE
Q 024021 108 PKGRALVPGCGT-GYDVVAMAS-PER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA---DFFT----WCPTELFDL 177 (274)
Q Consensus 108 ~~~~vLDiG~G~-G~~~~~l~~-~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~---d~~~----~~~~~~~D~ 177 (274)
++.+||-+|+|. |..+..+++ .|+ +|++++.+++.++.+++. . + ..+.. |+.+ .. ...+|+
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a-----~--~v~~~~~~~~~~~~~~~~-~~g~D~ 234 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-A-----D--RLVNPLEEDLLEVVRRVT-GSGVEV 234 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-C-----S--EEECTTTSCHHHHHHHHH-SSCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-H-----H--hccCcCccCHHHHHHHhc-CCCCCE
Confidence 678999999843 555666665 788 999999998877766543 1 1 11111 1111 11 346999
Q ss_pred EEecccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024021 178 IFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 178 v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 213 (274)
|+..-.- ...++...++|+++|.++...
T Consensus 235 vid~~g~--------~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 235 LLEFSGN--------EAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp EEECSCC--------HHHHHHHHHHEEEEEEEEECC
T ss_pred EEECCCC--------HHHHHHHHHHHhcCCEEEEEe
Confidence 9853221 134677889999999988754
No 380
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=92.05 E-value=0.1 Score=44.92 Aligned_cols=93 Identities=15% Similarity=0.130 Sum_probs=59.6
Q ss_pred CCCCeEEEEcCCc-chhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc-----ccCC---CCCCCCe
Q 024021 107 LPKGRALVPGCGT-GYDVVAMAS-PER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA-----DFFT---WCPTELF 175 (274)
Q Consensus 107 ~~~~~vLDiG~G~-G~~~~~l~~-~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~-----d~~~---~~~~~~~ 175 (274)
.++.+||-+|+|. |..+.++++ .|+ +|+++|.+++..+.+++.-. + ..+.. |+.+ ....+.+
T Consensus 190 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa-----~--~vi~~~~~~~~~~~~i~~~t~gg~ 262 (373)
T 1p0f_A 190 TPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGA-----T--ECLNPKDYDKPIYEVICEKTNGGV 262 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTC-----S--EEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCC-----c--EEEecccccchHHHHHHHHhCCCC
Confidence 4568999999764 556666666 677 89999999998888875321 1 11211 1111 0111379
Q ss_pred eEEEecccccccChhHHHHHHHHHHhcccCC-cEEEEEEc
Q 024021 176 DLIFDYTFFCAIEPEMRAAWAQKIKDFLKPD-GELITLMF 214 (274)
Q Consensus 176 D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~~~~~~~ 214 (274)
|+|+..-.- ...+....++|+++ |.++....
T Consensus 263 Dvvid~~g~--------~~~~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 263 DYAVECAGR--------IETMMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp SEEEECSCC--------HHHHHHHHHTBCTTTCEEEECCC
T ss_pred CEEEECCCC--------HHHHHHHHHHHhcCCCEEEEEcc
Confidence 999953221 23467888999999 99887543
No 381
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=92.01 E-value=0.12 Score=44.53 Aligned_cols=93 Identities=14% Similarity=0.153 Sum_probs=59.6
Q ss_pred CCCCeEEEEcCCc-chhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc-----ccCC---CCCCCCe
Q 024021 107 LPKGRALVPGCGT-GYDVVAMAS-PER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA-----DFFT---WCPTELF 175 (274)
Q Consensus 107 ~~~~~vLDiG~G~-G~~~~~l~~-~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~-----d~~~---~~~~~~~ 175 (274)
.++.+||-+|+|. |..+.++++ .|+ +|+++|.+++..+.+++.-. + ..+.. |+.+ ....+.+
T Consensus 189 ~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa-----~--~vi~~~~~~~~~~~~v~~~~~~g~ 261 (373)
T 2fzw_A 189 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGA-----T--ECINPQDFSKPIQEVLIEMTDGGV 261 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTC-----S--EEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCC-----c--eEeccccccccHHHHHHHHhCCCC
Confidence 4567999999764 555666666 687 89999999999888876421 1 11211 1111 0111379
Q ss_pred eEEEecccccccChhHHHHHHHHHHhcccCC-cEEEEEEc
Q 024021 176 DLIFDYTFFCAIEPEMRAAWAQKIKDFLKPD-GELITLMF 214 (274)
Q Consensus 176 D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~~~~~~~ 214 (274)
|+|+..-.- ...+....++|+++ |.+++...
T Consensus 262 D~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 262 DYSFECIGN--------VKVMRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp SEEEECSCC--------HHHHHHHHHTBCTTTCEEEECSC
T ss_pred CEEEECCCc--------HHHHHHHHHhhccCCcEEEEEec
Confidence 999853221 13467888999999 99887543
No 382
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=92.00 E-value=1.2 Score=44.68 Aligned_cols=128 Identities=13% Similarity=0.009 Sum_probs=77.6
Q ss_pred CCeEEEEcCCcchhHHHhhCCCC--eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccC------------C-----C
Q 024021 109 KGRALVPGCGTGYDVVAMASPER--YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFF------------T-----W 169 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~------------~-----~ 169 (274)
..+++|+-||.|++..-+...|. .+.++|+++.+++.-+.+.+. ..++.+|+. + .
T Consensus 851 ~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~p~------~~~~~~DI~~l~~~~~~gdi~~~~~~~l 924 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPG------TTVFTEDCNVLLKLVMAGEVTNSLGQRL 924 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHCTT------SEEECSCHHHHHHHHTTTCSBCSSCCBC
T ss_pred CceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCCC------CcEeeccHHHHhHhhhccchhhhhhhhc
Confidence 46899999999999999988886 588999999999888887632 334444432 1 1
Q ss_pred CCCCCeeEEEecccccccCh----------hHHHHH---HHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHH
Q 024021 170 CPTELFDLIFDYTFFCAIEP----------EMRAAW---AQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVL 236 (274)
Q Consensus 170 ~~~~~~D~v~~~~~~~~~~~----------~~~~~~---l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 236 (274)
...+.+|+|+....-..++. +.+..+ +-++.+.++|. +++.+....-... ........+.+.|
T Consensus 925 p~~~~vDvl~GGpPCQ~FS~agr~~~~~~~d~R~~L~~~~lriv~~~rPk--~fv~ENV~glls~--~~g~~~~~il~~L 1000 (1330)
T 3av4_A 925 PQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPR--FFLLENVRNFVSY--RRSMVLKLTLRCL 1000 (1330)
T ss_dssp CCTTTCSEEEECCCCTTTCSSSCCCHHHHHHHHHSHHHHHHHHHHHHCCS--EEEEEEEGGGGTT--TTTHHHHHHHHHH
T ss_pred cccCccceEEecCCCcccccccccccccccchhhHHHHHHHHHHHHhcCc--EEEEeccHHHhcc--CccHHHHHHHHHH
Confidence 11246899998765444321 111111 22344556775 4444432221100 0011356788888
Q ss_pred hcCCCcEEEE
Q 024021 237 QPMGFQAISI 246 (274)
Q Consensus 237 ~~~Gf~~~~~ 246 (274)
+..||.+...
T Consensus 1001 ~~lGY~v~~~ 1010 (1330)
T 3av4_A 1001 VRMGYQCTFG 1010 (1330)
T ss_dssp HHHTCEEEEE
T ss_pred HhcCCeeeEE
Confidence 8999987543
No 383
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=91.92 E-value=0.11 Score=44.71 Aligned_cols=93 Identities=16% Similarity=0.129 Sum_probs=59.3
Q ss_pred CCCCeEEEEcCCc-chhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc-----ccCC---CCCCCCe
Q 024021 107 LPKGRALVPGCGT-GYDVVAMAS-PER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA-----DFFT---WCPTELF 175 (274)
Q Consensus 107 ~~~~~vLDiG~G~-G~~~~~l~~-~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~-----d~~~---~~~~~~~ 175 (274)
.++.+||-+|+|. |..+.++++ .|+ +|+++|.+++..+.+++.-. + ..+.. |+.+ ....+.+
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa-----~--~vi~~~~~~~~~~~~v~~~~~~g~ 266 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGA-----T--DCLNPRELDKPVQDVITELTAGGV 266 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC-----S--EEECGGGCSSCHHHHHHHHHTSCB
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC-----c--EEEccccccchHHHHHHHHhCCCc
Confidence 4567999999763 556666666 788 89999999998888865321 1 11111 1111 0011369
Q ss_pred eEEEecccccccChhHHHHHHHHHHhcccCC-cEEEEEEc
Q 024021 176 DLIFDYTFFCAIEPEMRAAWAQKIKDFLKPD-GELITLMF 214 (274)
Q Consensus 176 D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~~~~~~~ 214 (274)
|+|+..-.- ...++...++|+++ |.+++...
T Consensus 267 Dvvid~~G~--------~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 267 DYSLDCAGT--------AQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp SEEEESSCC--------HHHHHHHHHTBCTTTCEEEECCC
T ss_pred cEEEECCCC--------HHHHHHHHHHhhcCCCEEEEECC
Confidence 999843221 23467888999999 99887543
No 384
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=91.90 E-value=2.3 Score=34.58 Aligned_cols=113 Identities=13% Similarity=-0.008 Sum_probs=69.7
Q ss_pred HHHhcCCCCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCC-hHHHHHHHHHhhcCCCCcceEEEEcccCCCCC----
Q 024021 100 HLHQSGALPKGRALVPGCGTGY---DVVAMASPERYVVGLEIS-DIAIKKAEELSSSLPNAKFVSFLKADFFTWCP---- 171 (274)
Q Consensus 100 ~~~~~~~~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~vD~~-~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~---- 171 (274)
.+.......++++|=.|++.|. .+..|++.|++|+.++.. .+..+.....+...+ .++.++.+|+.+...
T Consensus 22 ~mm~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~ 99 (271)
T 3v2g_A 22 SMMTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAG--GRAVAIRADNRDAEAIEQA 99 (271)
T ss_dssp HHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHH
T ss_pred hhccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHH
Confidence 3444445667889989887653 234555689999998664 344555444444433 468899999987211
Q ss_pred -------CCCeeEEEecccccc------cChhHHH-----------HHHHHHHhcccCCcEEEEEEc
Q 024021 172 -------TELFDLIFDYTFFCA------IEPEMRA-----------AWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 172 -------~~~~D~v~~~~~~~~------~~~~~~~-----------~~l~~~~~~L~pgG~~~~~~~ 214 (274)
.++.|+++.+..+.. .+.+.+. .+++.+...++++|.++.+.-
T Consensus 100 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS 166 (271)
T 3v2g_A 100 IRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS 166 (271)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred HHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 136899998754322 2323322 345666677778888777653
No 385
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=91.89 E-value=0.13 Score=44.17 Aligned_cols=92 Identities=14% Similarity=0.127 Sum_probs=58.9
Q ss_pred CCCCeEEEEcCCc-chhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc-----ccCC---CCCCCCe
Q 024021 107 LPKGRALVPGCGT-GYDVVAMAS-PER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA-----DFFT---WCPTELF 175 (274)
Q Consensus 107 ~~~~~vLDiG~G~-G~~~~~l~~-~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~-----d~~~---~~~~~~~ 175 (274)
.++.+||-+|+|. |..+..+++ .|+ +|+++|.+++.++.+++.-. + ..+.. |+.+ ....+.+
T Consensus 190 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa-----~--~vi~~~~~~~~~~~~~~~~~~~g~ 262 (374)
T 2jhf_A 190 TQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA-----T--ECVNPQDYKKPIQEVLTEMSNGGV 262 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC-----S--EEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC-----c--eEecccccchhHHHHHHHHhCCCC
Confidence 4567999999764 556666666 788 89999999998888865321 1 11211 1111 0111369
Q ss_pred eEEEecccccccChhHHHHHHHHHHhcccCC-cEEEEEE
Q 024021 176 DLIFDYTFFCAIEPEMRAAWAQKIKDFLKPD-GELITLM 213 (274)
Q Consensus 176 D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~~~~~~ 213 (274)
|+|+..-.- ...+....++|+++ |.+++..
T Consensus 263 D~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 263 DFSFEVIGR--------LDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp SEEEECSCC--------HHHHHHHHHHBCTTTCEEEECS
T ss_pred cEEEECCCC--------HHHHHHHHHHhhcCCcEEEEec
Confidence 999843221 13467788999999 9988754
No 386
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=91.84 E-value=0.07 Score=45.62 Aligned_cols=92 Identities=15% Similarity=0.110 Sum_probs=58.2
Q ss_pred CCCCeEEEEcC--CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-------CCCCCCee
Q 024021 107 LPKGRALVPGC--GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-------WCPTELFD 176 (274)
Q Consensus 107 ~~~~~vLDiG~--G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-------~~~~~~~D 176 (274)
.++.+||-.|+ |.|..+..+++ .|++|++++.+++.++.+++.-. + ..+..+-.+ ......+|
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~-----~--~~~~~~~~~~~~~~~~~~~~~~~d 233 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGA-----A--AGFNYKKEDFSEATLKFTKGAGVN 233 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTC-----S--EEEETTTSCHHHHHHHHTTTSCEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC-----c--EEEecCChHHHHHHHHHhcCCCce
Confidence 45679999984 45555555555 78899999999998888855421 1 111111111 12234699
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
+++.+..-. .+....++|+++|.+++...
T Consensus 234 ~vi~~~G~~---------~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 234 LILDCIGGS---------YWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp EEEESSCGG---------GHHHHHHHEEEEEEEEECCC
T ss_pred EEEECCCch---------HHHHHHHhccCCCEEEEEec
Confidence 998654321 24667889999999887653
No 387
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=91.80 E-value=0.5 Score=40.05 Aligned_cols=95 Identities=16% Similarity=0.170 Sum_probs=60.0
Q ss_pred CCCCCeEEEEcCC--cchhHHHhhC-C-CCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcc--c----CCCCCCCCe
Q 024021 106 ALPKGRALVPGCG--TGYDVVAMAS-P-ERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKAD--F----FTWCPTELF 175 (274)
Q Consensus 106 ~~~~~~vLDiG~G--~G~~~~~l~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d--~----~~~~~~~~~ 175 (274)
..++.+||-.|+| .|..+..+++ . |++|+++|.+++..+.+++.-. + ..+-..+ . .+....+.+
T Consensus 168 ~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~-----~-~~~~~~~~~~~~~~~~~~~~~~~ 241 (347)
T 1jvb_A 168 LDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGA-----D-YVINASMQDPLAEIRRITESKGV 241 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTC-----S-EEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC-----C-EEecCCCccHHHHHHHHhcCCCc
Confidence 3456899999987 4455555555 5 8999999999998888865421 1 1111111 1 011111479
Q ss_pred eEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 176 DLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 176 D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
|+|+....- ...++...++|+++|.++....
T Consensus 242 d~vi~~~g~--------~~~~~~~~~~l~~~G~iv~~g~ 272 (347)
T 1jvb_A 242 DAVIDLNNS--------EKTLSVYPKALAKQGKYVMVGL 272 (347)
T ss_dssp EEEEESCCC--------HHHHTTGGGGEEEEEEEEECCS
T ss_pred eEEEECCCC--------HHHHHHHHHHHhcCCEEEEECC
Confidence 999854321 1346778899999999887543
No 388
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=91.66 E-value=0.16 Score=42.99 Aligned_cols=91 Identities=18% Similarity=0.101 Sum_probs=59.4
Q ss_pred CCCCCeEEEEcCC-cchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-------CCCee
Q 024021 106 ALPKGRALVPGCG-TGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP-------TELFD 176 (274)
Q Consensus 106 ~~~~~~vLDiG~G-~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-------~~~~D 176 (274)
..++.+||-+|+| .|..+..+++ .|++|++++.+++.++.+++.- . + .. .|..+... .+.+|
T Consensus 162 ~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lG----a-~--~~--~d~~~~~~~~~~~~~~~~~d 232 (339)
T 1rjw_A 162 AKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELG----A-D--LV--VNPLKEDAAKFMKEKVGGVH 232 (339)
T ss_dssp CCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT----C-S--EE--ECTTTSCHHHHHHHHHSSEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCC----C-C--EE--ecCCCccHHHHHHHHhCCCC
Confidence 4566899999985 3555566655 7889999999999888886531 1 1 11 12221000 04699
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024021 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 213 (274)
+|+..... ...++...++|+++|.++...
T Consensus 233 ~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 233 AAVVTAVS--------KPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp EEEESSCC--------HHHHHHHHHHEEEEEEEEECC
T ss_pred EEEECCCC--------HHHHHHHHHHhhcCCEEEEec
Confidence 99854321 134677889999999988754
No 389
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=91.62 E-value=1.2 Score=35.99 Aligned_cols=106 Identities=17% Similarity=0.087 Sum_probs=65.5
Q ss_pred CCCCCeEEEEcCC-cchhH----HHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC---------
Q 024021 106 ALPKGRALVPGCG-TGYDV----VAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP--------- 171 (274)
Q Consensus 106 ~~~~~~vLDiG~G-~G~~~----~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~--------- 171 (274)
..++++||=.|++ +|..+ ..|++.|++|+.++.+....+.+++..... .++.++.+|+.+...
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~ 87 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF---GSELVFPCDVADDAQIDALFASLK 87 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHT---TCCCEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHc---CCcEEEECCCCCHHHHHHHHHHHH
Confidence 3456889999875 24444 344558999999998865555555444433 247889999987211
Q ss_pred --CCCeeEEEecccccc-----------cChhHHH-----------HHHHHHHhcccCCcEEEEEEc
Q 024021 172 --TELFDLIFDYTFFCA-----------IEPEMRA-----------AWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 172 --~~~~D~v~~~~~~~~-----------~~~~~~~-----------~~l~~~~~~L~pgG~~~~~~~ 214 (274)
.++.|+++.+..+.. .+.+.+. .+++.+...++++|.++.+..
T Consensus 88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 154 (271)
T 3ek2_A 88 THWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSY 154 (271)
T ss_dssp HHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred HHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEec
Confidence 147899998754322 3333322 344556666777787776553
No 390
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=91.54 E-value=0.062 Score=45.97 Aligned_cols=91 Identities=19% Similarity=0.114 Sum_probs=59.3
Q ss_pred CCCCeEEEEcC--CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-------CCCCCCee
Q 024021 107 LPKGRALVPGC--GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-------WCPTELFD 176 (274)
Q Consensus 107 ~~~~~vLDiG~--G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-------~~~~~~~D 176 (274)
.++.+||-.|+ |.|..+..+++ .|++|++++.+++.++.+++.-. ...+..+-.+ .. ...+|
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa-------~~~~~~~~~~~~~~~~~~~-~~g~D 237 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGA-------KRGINYRSEDFAAVIKAET-GQGVD 237 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTC-------SEEEETTTSCHHHHHHHHH-SSCEE
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC-------CEEEeCCchHHHHHHHHHh-CCCce
Confidence 45679998853 45666666665 78999999999999988876421 1112111111 11 34699
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
+|+....- + .+....++|+++|.+++...
T Consensus 238 vvid~~g~-----~----~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 238 IILDMIGA-----A----YFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp EEEESCCG-----G----GHHHHHHTEEEEEEEEECCC
T ss_pred EEEECCCH-----H----HHHHHHHHhccCCEEEEEEe
Confidence 99964332 1 35677889999999887543
No 391
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=91.53 E-value=0.72 Score=39.06 Aligned_cols=91 Identities=13% Similarity=0.158 Sum_probs=60.1
Q ss_pred CCCCCeEEEEcC--CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC----------CCCC
Q 024021 106 ALPKGRALVPGC--GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT----------WCPT 172 (274)
Q Consensus 106 ~~~~~~vLDiG~--G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~----------~~~~ 172 (274)
..++.+||-.|+ |.|..+..+++ .|++|++++.+++..+.+++. +. + ..+ |..+ ....
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~----g~-~--~~~--d~~~~~~~~~~~~~~~~~ 237 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSI----GG-E--VFI--DFTKEKDIVGAVLKATDG 237 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHT----TC-C--EEE--ETTTCSCHHHHHHHHHTS
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHc----CC-c--eEE--ecCccHhHHHHHHHHhCC
Confidence 345689999998 45666666655 788999999998887777653 11 1 111 3321 0112
Q ss_pred CCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 173 ELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 173 ~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
.+|+|+..... ...++.+.+.|+++|.++....
T Consensus 238 -~~D~vi~~~g~--------~~~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 238 -GAHGVINVSVS--------EAAIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp -CEEEEEECSSC--------HHHHHHHTTSEEEEEEEEECCC
T ss_pred -CCCEEEECCCc--------HHHHHHHHHHHhcCCEEEEEeC
Confidence 69999865331 1356788999999999887543
No 392
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=91.50 E-value=2.4 Score=34.75 Aligned_cols=105 Identities=12% Similarity=0.073 Sum_probs=65.4
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChH-HHHHHHHHhhcCCCCcceEEEEcccCCCCC-----------
Q 024021 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDI-AIKKAEELSSSLPNAKFVSFLKADFFTWCP----------- 171 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~vD~~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~----------- 171 (274)
..++++|=.|++.|. .+..|++.|++|+.++.++. ..+...+.....+ .++.++.+|+.+...
T Consensus 45 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 45 LKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG--VKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT--CCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 456788888876652 23455558999999998765 3444444444433 468999999987211
Q ss_pred CCCeeEEEeccccc-------ccChhHH-----------HHHHHHHHhcccCCcEEEEEE
Q 024021 172 TELFDLIFDYTFFC-------AIEPEMR-----------AAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 172 ~~~~D~v~~~~~~~-------~~~~~~~-----------~~~l~~~~~~L~pgG~~~~~~ 213 (274)
.+..|+++.+.... ..+.+.+ ..+++.+...++.+|.++.+.
T Consensus 123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 13689999774322 1233332 234566677778888877654
No 393
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=91.48 E-value=0.79 Score=38.96 Aligned_cols=89 Identities=16% Similarity=0.158 Sum_probs=58.1
Q ss_pred CCCCeEEEEcC--CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC---------CCCCCC
Q 024021 107 LPKGRALVPGC--GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT---------WCPTEL 174 (274)
Q Consensus 107 ~~~~~vLDiG~--G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~---------~~~~~~ 174 (274)
.++.+||-.|+ |.|..+..+++ .|++|++++.+++.++.+++.- . + ..+ |..+ ......
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g----a-~--~~~--d~~~~~~~~~~~~~~~~~~ 239 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNG----A-H--EVF--NHREVNYIDKIKKYVGEKG 239 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT----C-S--EEE--ETTSTTHHHHHHHHHCTTC
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcC----C-C--EEE--eCCCchHHHHHHHHcCCCC
Confidence 45689999996 45566665555 7899999999998888775431 1 1 112 2211 112236
Q ss_pred eeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024021 175 FDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 175 ~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 213 (274)
+|+|+.+..- ..+....++|+++|.+++..
T Consensus 240 ~D~vi~~~G~---------~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 240 IDIIIEMLAN---------VNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp EEEEEESCHH---------HHHHHHHHHEEEEEEEEECC
T ss_pred cEEEEECCCh---------HHHHHHHHhccCCCEEEEEe
Confidence 9999854321 23567789999999988754
No 394
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=91.45 E-value=0.22 Score=41.84 Aligned_cols=89 Identities=15% Similarity=0.137 Sum_probs=59.1
Q ss_pred eEEEEcC--CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEccc--CCCCCCCCeeEEEeccccc
Q 024021 111 RALVPGC--GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADF--FTWCPTELFDLIFDYTFFC 185 (274)
Q Consensus 111 ~vLDiG~--G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~--~~~~~~~~~D~v~~~~~~~ 185 (274)
+||=.|+ |.|..+.++++ .|++|++++.+++..+.+++.-. + ..+-..+. ......+.+|+|+..
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa-----~-~vi~~~~~~~~~~~~~~~~d~v~d~---- 218 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGA-----N-RILSRDEFAESRPLEKQLWAGAIDT---- 218 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTC-----S-EEEEGGGSSCCCSSCCCCEEEEEES----
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC-----C-EEEecCCHHHHHhhcCCCccEEEEC----
Confidence 5998886 56777777776 78899999999999998877421 1 11111111 111223579998843
Q ss_pred ccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 186 AIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 186 ~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
... ..++...++|+++|.++....
T Consensus 219 -~g~----~~~~~~~~~l~~~G~iv~~G~ 242 (324)
T 3nx4_A 219 -VGD----KVLAKVLAQMNYGGCVAACGL 242 (324)
T ss_dssp -SCH----HHHHHHHHTEEEEEEEEECCC
T ss_pred -CCc----HHHHHHHHHHhcCCEEEEEec
Confidence 221 257888999999999887643
No 395
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=91.32 E-value=0.094 Score=43.68 Aligned_cols=89 Identities=16% Similarity=0.088 Sum_probs=58.5
Q ss_pred CCCCCeEEEEcC--CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc----ccCCCCCCCCeeEE
Q 024021 106 ALPKGRALVPGC--GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA----DFFTWCPTELFDLI 178 (274)
Q Consensus 106 ~~~~~~vLDiG~--G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~----d~~~~~~~~~~D~v 178 (274)
..++.+||-.|+ |.|..+..+++ .|++|++++.+++..+.+++. +. + ..+.. |+.+.. +.+|+|
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----ga-~--~~~~~~~~~~~~~~~--~~~d~v 193 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLAL----GA-E--EAATYAEVPERAKAW--GGLDLV 193 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHT----TC-S--EEEEGGGHHHHHHHT--TSEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc----CC-C--EEEECCcchhHHHHh--cCceEE
Confidence 345689999997 45666666665 788999999999888887653 11 1 11211 111111 569999
Q ss_pred EecccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024021 179 FDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 179 ~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 213 (274)
+. ..- ..++...++|+++|.++...
T Consensus 194 id-~g~---------~~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 194 LE-VRG---------KEVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp EE-CSC---------TTHHHHHTTEEEEEEEEEC-
T ss_pred EE-CCH---------HHHHHHHHhhccCCEEEEEe
Confidence 96 221 13567889999999988754
No 396
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=91.23 E-value=0.069 Score=45.02 Aligned_cols=90 Identities=12% Similarity=0.097 Sum_probs=58.8
Q ss_pred CCCCeEEEEcC--CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC---------CCCCCC
Q 024021 107 LPKGRALVPGC--GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT---------WCPTEL 174 (274)
Q Consensus 107 ~~~~~vLDiG~--G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~---------~~~~~~ 174 (274)
.++.+||-.|+ |.|..+..+++ .|++|++++.+++..+.+++.- . + . .+ |..+ ......
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g----~-~-~-~~--~~~~~~~~~~~~~~~~~~~ 209 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAG----A-W-Q-VI--NYREEDLVERLKEITGGKK 209 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHT----C-S-E-EE--ETTTSCHHHHHHHHTTTCC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcC----C-C-E-EE--ECCCccHHHHHHHHhCCCC
Confidence 45689999984 55555555554 7889999999998888887632 1 1 1 12 2211 112346
Q ss_pred eeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 175 FDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 175 ~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
+|+++.+.. . ..++...++|+++|.++....
T Consensus 210 ~D~vi~~~g-~--------~~~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 210 VRVVYDSVG-R--------DTWERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp EEEEEECSC-G--------GGHHHHHHTEEEEEEEEECCC
T ss_pred ceEEEECCc-h--------HHHHHHHHHhcCCCEEEEEec
Confidence 999996543 1 235778899999999887653
No 397
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=91.06 E-value=0.53 Score=41.01 Aligned_cols=43 Identities=19% Similarity=0.063 Sum_probs=36.5
Q ss_pred CeEEEEcCCcchhHHHhhCCCC---e----EEEEeCChHHHHHHHHHhhc
Q 024021 110 GRALVPGCGTGYDVVAMASPER---Y----VVGLEISDIAIKKAEELSSS 152 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~~l~~~~~---~----v~~vD~~~~~~~~a~~~~~~ 152 (274)
.+|+|+-||.|.....+.+.|. . |.++|+++.++..-+.+...
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~ 60 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSK 60 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCS
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCC
Confidence 5899999999999998877662 3 78899999999888888754
No 398
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=91.01 E-value=1.1 Score=36.42 Aligned_cols=61 Identities=16% Similarity=0.112 Sum_probs=46.1
Q ss_pred CCCCCeEEEEcCCcchh---HHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024021 106 ALPKGRALVPGCGTGYD---VVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~---~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 168 (274)
.+.++++|=-|++.|.- +..|++.|++|+.+|.+++.++...+.+...+ .++.++.+|+.+
T Consensus 6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g--~~~~~~~~Dv~~ 69 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG--YDAHGVAFDVTD 69 (255)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT--CCEEECCCCTTC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEeeCCC
Confidence 45678888888777632 35556699999999999998888777766554 468888888875
No 399
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=90.90 E-value=0.1 Score=44.11 Aligned_cols=90 Identities=21% Similarity=0.203 Sum_probs=59.3
Q ss_pred CCCCeEEEEcC--CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC---------CCCCCC
Q 024021 107 LPKGRALVPGC--GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT---------WCPTEL 174 (274)
Q Consensus 107 ~~~~~vLDiG~--G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~---------~~~~~~ 174 (274)
.++.+||-.|+ |.|..+..+++ .|++|++++.+++.++.+++.- . + . .+ |..+ ......
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g----~-~-~-~~--d~~~~~~~~~i~~~~~~~~ 214 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLG----C-H-H-TI--NYSTQDFAEVVREITGGKG 214 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHT----C-S-E-EE--ETTTSCHHHHHHHHHTTCC
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC----C-C-E-EE--ECCCHHHHHHHHHHhCCCC
Confidence 45679999995 56666666655 7889999999998888886532 1 1 1 11 2221 111246
Q ss_pred eeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 175 FDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 175 ~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
+|+++.+..- ..++...++|+++|.++....
T Consensus 215 ~d~vi~~~g~---------~~~~~~~~~l~~~G~iv~~g~ 245 (333)
T 1wly_A 215 VDVVYDSIGK---------DTLQKSLDCLRPRGMCAAYGH 245 (333)
T ss_dssp EEEEEECSCT---------TTHHHHHHTEEEEEEEEECCC
T ss_pred CeEEEECCcH---------HHHHHHHHhhccCCEEEEEec
Confidence 9999965331 235678899999999887643
No 400
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=90.85 E-value=0.77 Score=39.21 Aligned_cols=90 Identities=17% Similarity=0.229 Sum_probs=59.3
Q ss_pred CCCeEEEEc-C-CcchhHHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc--ccCC---CCCCCCeeEE
Q 024021 108 PKGRALVPG-C-GTGYDVVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA--DFFT---WCPTELFDLI 178 (274)
Q Consensus 108 ~~~~vLDiG-~-G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~--d~~~---~~~~~~~D~v 178 (274)
++.+||=.| + |.|..+..+++ .+.+|++++.+++..+.+++.-. + .++.. |+.+ ....+.+|+|
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGa-----d--~vi~~~~~~~~~v~~~~~~g~Dvv 243 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGA-----H--HVIDHSKPLAAEVAALGLGAPAFV 243 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTC-----S--EEECTTSCHHHHHHTTCSCCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCC-----C--EEEeCCCCHHHHHHHhcCCCceEE
Confidence 456899888 3 44777778876 47899999999998888876321 1 11111 1111 1233579999
Q ss_pred EecccccccChhHHHHHHHHHHhcccCCcEEEEE
Q 024021 179 FDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITL 212 (274)
Q Consensus 179 ~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~ 212 (274)
+..-. . ...++...++|+++|.+++.
T Consensus 244 id~~g-----~---~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 244 FSTTH-----T---DKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EECSC-----H---HHHHHHHHHHSCTTCEEEEC
T ss_pred EECCC-----c---hhhHHHHHHHhcCCCEEEEE
Confidence 84221 1 23567888999999999876
No 401
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=90.72 E-value=1.3 Score=37.04 Aligned_cols=88 Identities=17% Similarity=0.118 Sum_probs=55.1
Q ss_pred CeEEEEcCCc-c-hhHHHhhCCCC--eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCCCCeeEEEecccc
Q 024021 110 GRALVPGCGT-G-YDVVAMASPER--YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPTELFDLIFDYTFF 184 (274)
Q Consensus 110 ~~vLDiG~G~-G-~~~~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~v~~~~~~ 184 (274)
.+|.=||+|. | .++..+++.|. +|+++|.+++.++.+++. +. +.-...|..+ . ....|+|+..
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~----G~---~~~~~~~~~~~~--~~~aDvVila--- 101 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL----GI---IDEGTTSIAKVE--DFSPDFVMLS--- 101 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT----TS---CSEEESCTTGGG--GGCCSEEEEC---
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHC----CC---cchhcCCHHHHh--hccCCEEEEe---
Confidence 6898998764 1 22344455787 999999999888777643 21 1112233322 1 2357988854
Q ss_pred cccChhHHHHHHHHHHhcccCCcEEEE
Q 024021 185 CAIEPEMRAAWAQKIKDFLKPDGELIT 211 (274)
Q Consensus 185 ~~~~~~~~~~~l~~~~~~L~pgG~~~~ 211 (274)
+++.....+++.+...+++|.+++-
T Consensus 102 --vp~~~~~~vl~~l~~~l~~~~iv~d 126 (314)
T 3ggo_A 102 --SPVRTFREIAKKLSYILSEDATVTD 126 (314)
T ss_dssp --SCGGGHHHHHHHHHHHSCTTCEEEE
T ss_pred --CCHHHHHHHHHHHhhccCCCcEEEE
Confidence 3334456778888888988876543
No 402
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=90.51 E-value=1.6 Score=34.51 Aligned_cols=89 Identities=10% Similarity=-0.040 Sum_probs=57.5
Q ss_pred CCeEEEEcCCcchhHHHhh----CCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-----CCCCCeeEEE
Q 024021 109 KGRALVPGCGTGYDVVAMA----SPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-----CPTELFDLIF 179 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~----~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~D~v~ 179 (274)
..+|+=+|+| ..+..++ +.|. |+++|.+++.++.++ . .+.++.+|..+. ..-..+|.|+
T Consensus 9 ~~~viI~G~G--~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~----~~~~i~gd~~~~~~l~~a~i~~ad~vi 76 (234)
T 2aef_A 9 SRHVVICGWS--ESTLECLRELRGSEV-FVLAEDENVRKKVLR-----S----GANFVHGDPTRVSDLEKANVRGARAVI 76 (234)
T ss_dssp -CEEEEESCC--HHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----T----TCEEEESCTTCHHHHHHTTCTTCSEEE
T ss_pred CCEEEEECCC--hHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----c----CCeEEEcCCCCHHHHHhcCcchhcEEE
Confidence 3678888874 5554443 3677 999999998776654 1 277889998762 2235688888
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 180 DYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 180 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
+.. +++.....+....+.+.|+..++....
T Consensus 77 ~~~-----~~d~~n~~~~~~a~~~~~~~~iia~~~ 106 (234)
T 2aef_A 77 VDL-----ESDSETIHCILGIRKIDESVRIIAEAE 106 (234)
T ss_dssp ECC-----SCHHHHHHHHHHHHHHCSSSEEEEECS
T ss_pred EcC-----CCcHHHHHHHHHHHHHCCCCeEEEEEC
Confidence 532 223334445566667788777776553
No 403
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=90.51 E-value=1.8 Score=30.85 Aligned_cols=106 Identities=10% Similarity=-0.010 Sum_probs=58.2
Q ss_pred CCeEEEEcCCcchhHHHhh----CCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-----CCCCCeeEEE
Q 024021 109 KGRALVPGCGTGYDVVAMA----SPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-----CPTELFDLIF 179 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~----~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~D~v~ 179 (274)
..+|+=+|+ |..+..++ +.|.+|+++|.+++.++.++. . ...++.+|..+. .....+|+|+
T Consensus 6 ~~~v~I~G~--G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~----~----~~~~~~~d~~~~~~l~~~~~~~~d~vi 75 (144)
T 2hmt_A 6 NKQFAVIGL--GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS----Y----ATHAVIANATEENELLSLGIRNFEYVI 75 (144)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT----T----CSEEEECCTTCHHHHHTTTGGGCSEEE
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----h----CCEEEEeCCCCHHHHHhcCCCCCCEEE
Confidence 457888987 55555444 368899999998875543321 1 135566776541 1124689988
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcE
Q 024021 180 DYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQA 243 (274)
Q Consensus 180 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 243 (274)
....-. ......+....+.+.+. .++... +.....+.++..|...
T Consensus 76 ~~~~~~----~~~~~~~~~~~~~~~~~-~ii~~~--------------~~~~~~~~l~~~g~~~ 120 (144)
T 2hmt_A 76 VAIGAN----IQASTLTTLLLKELDIP-NIWVKA--------------QNYYHHKVLEKIGADR 120 (144)
T ss_dssp ECCCSC----HHHHHHHHHHHHHTTCS-EEEEEC--------------CSHHHHHHHHHHTCSE
T ss_pred ECCCCc----hHHHHHHHHHHHHcCCC-eEEEEe--------------CCHHHHHHHHHcCCCE
Confidence 543311 11122334444556665 555443 2223345666667653
No 404
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=90.50 E-value=3 Score=33.71 Aligned_cols=106 Identities=19% Similarity=0.083 Sum_probs=66.2
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCC-hHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-----------
Q 024021 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEIS-DIAIKKAEELSSSLPNAKFVSFLKADFFTWCP----------- 171 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~vD~~-~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~----------- 171 (274)
..++++|=.|++.|. .+..|++.|++|+.++.. .+..+...+.....+ .++.++.+|+.+...
T Consensus 16 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 93 (270)
T 3is3_A 16 LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALG--SDAIAIKADIRQVPEIVKLFDQAVAH 93 (270)
T ss_dssp CTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 456788888876553 234555689999998764 455555555444433 468999999987211
Q ss_pred CCCeeEEEecccccc------cChhHHH-----------HHHHHHHhcccCCcEEEEEEc
Q 024021 172 TELFDLIFDYTFFCA------IEPEMRA-----------AWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 172 ~~~~D~v~~~~~~~~------~~~~~~~-----------~~l~~~~~~L~pgG~~~~~~~ 214 (274)
.++.|+++.+..... .+.+.+. .+.+.+...++++|.++.+.-
T Consensus 94 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 94 FGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp HSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 136899997754322 2333322 344666777888888777654
No 405
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=90.36 E-value=1.9 Score=36.29 Aligned_cols=89 Identities=10% Similarity=-0.034 Sum_probs=59.4
Q ss_pred CCeEEEEcCCcchhHHHhhC----CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-----CCCCCeeEEE
Q 024021 109 KGRALVPGCGTGYDVVAMAS----PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-----CPTELFDLIF 179 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~~----~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~D~v~ 179 (274)
..+++=+|+ |..+..+++ .|. ++.+|.+++.++ ++. ..+.++.+|..+. ..-+.+|.++
T Consensus 115 ~~~viI~G~--G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~--------~~~~~i~gd~~~~~~L~~a~i~~a~~vi 182 (336)
T 1lnq_A 115 SRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKK-VLR--------SGANFVHGDPTRVSDLEKANVRGARAVI 182 (336)
T ss_dssp -CEEEEESC--CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH--------TTCEEEESCTTSHHHHHHTCSTTEEEEE
T ss_pred cCCEEEECC--cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh--------CCcEEEEeCCCCHHHHHhcChhhccEEE
Confidence 357888876 666666654 577 999999998887 543 1378899998872 2235789888
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 180 DYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 180 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
+.. +++..........+.+.|...++....
T Consensus 183 ~~~-----~~d~~n~~~~~~ar~~~~~~~iiar~~ 212 (336)
T 1lnq_A 183 VDL-----ESDSETIHCILGIRKIDESVRIIAEAE 212 (336)
T ss_dssp ECC-----SSHHHHHHHHHHHHTTCTTSEEEEECS
T ss_pred EcC-----CccHHHHHHHHHHHHHCCCCeEEEEEC
Confidence 532 233334455566677888877776553
No 406
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=90.29 E-value=5.1 Score=31.97 Aligned_cols=60 Identities=10% Similarity=-0.111 Sum_probs=43.5
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024021 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 168 (274)
..++++|=.|++.|. .+..|++.|++|+.++.+++.++.....+...+ .++.++.+|+.+
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~ 67 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG--GRIVARSLDARN 67 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT--CEEEEEECCTTC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECcCCC
Confidence 345788888877653 234555689999999999887777766665543 468888888865
No 407
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=90.23 E-value=2.8 Score=32.87 Aligned_cols=131 Identities=11% Similarity=-0.035 Sum_probs=71.7
Q ss_pred CCCCeEEEEcCCcchhHHHhh----CCCCeEEEEeCChHHHHHHHHHhhcCCCCcce-EEEEcccCCCC--CCCCeeEEE
Q 024021 107 LPKGRALVPGCGTGYDVVAMA----SPERYVVGLEISDIAIKKAEELSSSLPNAKFV-SFLKADFFTWC--PTELFDLIF 179 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~----~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~~d~~~~~--~~~~~D~v~ 179 (274)
..+++||=.|+ +|..+..++ +.|.+|++++.++........ .++ .++.+|+.+.. .-+.+|+|+
T Consensus 19 l~~~~ilVtGa-tG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~--------~~~~~~~~~Dl~~~~~~~~~~~D~vi 89 (236)
T 3e8x_A 19 FQGMRVLVVGA-NGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE--------RGASDIVVANLEEDFSHAFASIDAVV 89 (236)
T ss_dssp --CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH--------TTCSEEEECCTTSCCGGGGTTCSEEE
T ss_pred cCCCeEEEECC-CChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh--------CCCceEEEcccHHHHHHHHcCCCEEE
Confidence 34678888875 455554444 489999999998876544332 137 88999986311 113689999
Q ss_pred ecccccccCh-hH--------HHHHHHHHHhcccCCcEEEE-EEccCCCCC----CCCCcccCHHHHHHHHhcCCCcEEE
Q 024021 180 DYTFFCAIEP-EM--------RAAWAQKIKDFLKPDGELIT-LMFPISDHV----GGPPYKVSVSDYEEVLQPMGFQAIS 245 (274)
Q Consensus 180 ~~~~~~~~~~-~~--------~~~~l~~~~~~L~pgG~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~l~~~Gf~~~~ 245 (274)
.+........ .. ...+++.+.+. . .+.++. ..+...... ....|..++...+++++..|+...-
T Consensus 90 ~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~-~~~iv~~SS~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~gi~~~~ 167 (236)
T 3e8x_A 90 FAAGSGPHTGADKTILIDLWGAIKTIQEAEKR-G-IKRFIMVSSVGTVDPDQGPMNMRHYLVAKRLADDELKRSSLDYTI 167 (236)
T ss_dssp ECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHH-T-CCEEEEECCTTCSCGGGSCGGGHHHHHHHHHHHHHHHHSSSEEEE
T ss_pred ECCCCCCCCCccccchhhHHHHHHHHHHHHHc-C-CCEEEEEecCCCCCCCCChhhhhhHHHHHHHHHHHHHHCCCCEEE
Confidence 7755432111 10 12233333221 2 245544 333322211 1112334566777788888888766
Q ss_pred Eee
Q 024021 246 IVD 248 (274)
Q Consensus 246 ~~~ 248 (274)
+..
T Consensus 168 lrp 170 (236)
T 3e8x_A 168 VRP 170 (236)
T ss_dssp EEE
T ss_pred EeC
Confidence 655
No 408
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=90.23 E-value=0.9 Score=38.83 Aligned_cols=91 Identities=22% Similarity=0.113 Sum_probs=55.5
Q ss_pred CCCeEEEEcCCc-chhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC----CCCCCCeeEEEec
Q 024021 108 PKGRALVPGCGT-GYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT----WCPTELFDLIFDY 181 (274)
Q Consensus 108 ~~~~vLDiG~G~-G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~D~v~~~ 181 (274)
++.+||-+|+|. |..+..+++ .|++|++++.+++..+.+++.+.. + .++ |..+ ....+.+|+|+..
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa----~--~v~--~~~~~~~~~~~~~~~D~vid~ 258 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGA----D--SFL--VSRDQEQMQAAAGTLDGIIDT 258 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCC----S--EEE--ETTCHHHHHHTTTCEEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCC----c--eEE--eccCHHHHHHhhCCCCEEEEC
Confidence 678999998743 444455555 788999999999887777643311 1 111 1111 0011469999965
Q ss_pred ccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 182 TFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 182 ~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
-.... .++...++|+++|.++....
T Consensus 259 ~g~~~--------~~~~~~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 259 VSAVH--------PLLPLFGLLKSHGKLILVGA 283 (366)
T ss_dssp CSSCC--------CSHHHHHHEEEEEEEEECCC
T ss_pred CCcHH--------HHHHHHHHHhcCCEEEEEcc
Confidence 33221 13456778899999887543
No 409
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=90.19 E-value=1.9 Score=34.42 Aligned_cols=76 Identities=16% Similarity=0.063 Sum_probs=54.0
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-----------C
Q 024021 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP-----------T 172 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-----------~ 172 (274)
..++++|=.|++.|. .+..|++.|++|+.++.+++..+...+.....+ .++.++.+|+.+... .
T Consensus 7 ~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T 3qiv_A 7 FENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG--GTAISVAVDVSDPESAKAMADRTLAEF 84 (253)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 446788888876552 234555589999999999988877776665543 568899999987211 1
Q ss_pred CCeeEEEecccc
Q 024021 173 ELFDLIFDYTFF 184 (274)
Q Consensus 173 ~~~D~v~~~~~~ 184 (274)
+..|+++.+..+
T Consensus 85 g~id~li~~Ag~ 96 (253)
T 3qiv_A 85 GGIDYLVNNAAI 96 (253)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 368999987644
No 410
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=90.12 E-value=0.58 Score=39.57 Aligned_cols=97 Identities=11% Similarity=0.105 Sum_probs=59.8
Q ss_pred CCCCCeEEEEcCCcchh-HHHhhC--CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC----CCCCCCeeEE
Q 024021 106 ALPKGRALVPGCGTGYD-VVAMAS--PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT----WCPTELFDLI 178 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~-~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~D~v 178 (274)
..++.+||=+|+|.+.. +..+++ .+.+|+++|.+++.++.+++..... -+..-..|..+ ......+|.+
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~----~i~~~~~~~~~~v~~~t~g~g~d~~ 236 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADV----TINSGDVNPVDEIKKITGGLGVQSA 236 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSE----EEEC-CCCHHHHHHHHTTSSCEEEE
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeE----EEeCCCCCHHHHhhhhcCCCCceEE
Confidence 45678999999987543 334443 4779999999999888887654211 12222222221 2223457777
Q ss_pred EecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 179 FDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 179 ~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
+.... . ...+....++|+++|.+++...
T Consensus 237 ~~~~~----~----~~~~~~~~~~l~~~G~~v~~g~ 264 (348)
T 4eez_A 237 IVCAV----A----RIAFEQAVASLKPMGKMVAVAV 264 (348)
T ss_dssp EECCS----C----HHHHHHHHHTEEEEEEEEECCC
T ss_pred EEecc----C----cchhheeheeecCCceEEEEec
Confidence 64322 1 2356788899999999887543
No 411
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=90.00 E-value=1.5 Score=37.19 Aligned_cols=92 Identities=11% Similarity=0.008 Sum_probs=59.0
Q ss_pred CCCC--CeEEEEcC--CcchhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC--------CC
Q 024021 106 ALPK--GRALVPGC--GTGYDVVAMAS-PER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW--------CP 171 (274)
Q Consensus 106 ~~~~--~~vLDiG~--G~G~~~~~l~~-~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--------~~ 171 (274)
..++ .+||-.|+ |.|..+..+++ .|+ +|++++.+++..+.+++.+ +. + ..+ |..+. ..
T Consensus 156 ~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~---g~-~--~~~--d~~~~~~~~~~~~~~ 227 (357)
T 2zb4_A 156 ITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL---GF-D--AAI--NYKKDNVAEQLRESC 227 (357)
T ss_dssp CCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS---CC-S--EEE--ETTTSCHHHHHHHHC
T ss_pred CCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc---CC-c--eEE--ecCchHHHHHHHHhc
Confidence 3456 89999997 44555555554 788 9999999988887776533 11 1 111 22210 01
Q ss_pred CCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 172 TELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 172 ~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
.+.+|+++.+.. ...+....++|+++|.+++...
T Consensus 228 ~~~~d~vi~~~G---------~~~~~~~~~~l~~~G~iv~~G~ 261 (357)
T 2zb4_A 228 PAGVDVYFDNVG---------GNISDTVISQMNENSHIILCGQ 261 (357)
T ss_dssp TTCEEEEEESCC---------HHHHHHHHHTEEEEEEEEECCC
T ss_pred CCCCCEEEECCC---------HHHHHHHHHHhccCcEEEEECC
Confidence 126999985433 1346788899999999887543
No 412
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=89.93 E-value=0.15 Score=43.39 Aligned_cols=90 Identities=17% Similarity=0.228 Sum_probs=58.0
Q ss_pred CCCeEEEEc-C-CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc--ccCC---CCCCCCeeEEE
Q 024021 108 PKGRALVPG-C-GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA--DFFT---WCPTELFDLIF 179 (274)
Q Consensus 108 ~~~~vLDiG-~-G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~--d~~~---~~~~~~~D~v~ 179 (274)
++.+||=.| + |.|..+..+++ .|++|++++.+++.++.+++.-. + ..+.. |+.+ ......+|+|+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa-----~--~vi~~~~~~~~~~~~~~~~g~Dvv~ 222 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGA-----D--IVLNHKESLLNQFKTQGIELVDYVF 222 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTC-----S--EEECTTSCHHHHHHHHTCCCEEEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC-----c--EEEECCccHHHHHHHhCCCCccEEE
Confidence 568899884 3 34556666665 78899999999999998887431 1 11111 1111 11234699999
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCcEEEEE
Q 024021 180 DYTFFCAIEPEMRAAWAQKIKDFLKPDGELITL 212 (274)
Q Consensus 180 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~ 212 (274)
.... . ...++...++|+++|.++..
T Consensus 223 d~~g-----~---~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 223 CTFN-----T---DMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp ESSC-----H---HHHHHHHHHHEEEEEEEEES
T ss_pred ECCC-----c---hHHHHHHHHHhccCCEEEEE
Confidence 5321 1 23567888999999998764
No 413
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=89.89 E-value=2.5 Score=34.79 Aligned_cols=105 Identities=15% Similarity=0.147 Sum_probs=65.7
Q ss_pred CCCCeEEEEcCCc--ch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC----------
Q 024021 107 LPKGRALVPGCGT--GY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP---------- 171 (274)
Q Consensus 107 ~~~~~vLDiG~G~--G~---~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~---------- 171 (274)
..++++|=.|++. |. .+..|++.|++|+.++.++...+...+..... .++.++.+|+.+...
T Consensus 28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~ 104 (296)
T 3k31_A 28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL---GVKLTVPCDVSDAESVDNMFKVLAE 104 (296)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH---TCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc---CCeEEEEcCCCCHHHHHHHHHHHHH
Confidence 4467888888753 32 34556668999999999876555554443333 246789999987211
Q ss_pred -CCCeeEEEeccccc----------ccChhHH-----------HHHHHHHHhcccCCcEEEEEEc
Q 024021 172 -TELFDLIFDYTFFC----------AIEPEMR-----------AAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 172 -~~~~D~v~~~~~~~----------~~~~~~~-----------~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
.++.|+++.+..+. ..+.+.+ ..+++.+...++.+|.++.+..
T Consensus 105 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS 169 (296)
T 3k31_A 105 EWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSY 169 (296)
T ss_dssp HHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred HcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEe
Confidence 14689999875442 1222332 2344566667777888777653
No 414
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=89.78 E-value=7.2 Score=31.82 Aligned_cols=57 Identities=14% Similarity=0.005 Sum_probs=42.2
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024021 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 168 (274)
+.++.+|=-|++.|. .+..|++.|++|+.+|.+++.++.+.+... .++.++.+|+.+
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g-----~~~~~~~~Dv~~ 86 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIG-----GGAVGIQADSAN 86 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-----TTCEEEECCTTC
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC-----CCeEEEEecCCC
Confidence 567888888887773 345566699999999999988877665542 346777888764
No 415
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=89.51 E-value=3.4 Score=32.69 Aligned_cols=75 Identities=21% Similarity=0.111 Sum_probs=52.5
Q ss_pred CCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC-----------CCC
Q 024021 108 PKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC-----------PTE 173 (274)
Q Consensus 108 ~~~~vLDiG~G~G~---~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-----------~~~ 173 (274)
.++++|=.|++.|. .+..|++.|++|+.++.+++..+.........+ .++.++.+|+.+.. ..+
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKG--FKARGLVLNISDIESIQNFFAEIKAENL 81 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 45678877765542 234555589999999999988877776665543 46899999998721 124
Q ss_pred CeeEEEecccc
Q 024021 174 LFDLIFDYTFF 184 (274)
Q Consensus 174 ~~D~v~~~~~~ 184 (274)
+.|+++.+..+
T Consensus 82 ~id~li~~Ag~ 92 (247)
T 3lyl_A 82 AIDILVNNAGI 92 (247)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999987543
No 416
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=89.45 E-value=0.35 Score=40.59 Aligned_cols=94 Identities=13% Similarity=0.035 Sum_probs=57.3
Q ss_pred CCC-eEEEEcC--CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc--ccCCCCCCCCeeEEEec
Q 024021 108 PKG-RALVPGC--GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA--DFFTWCPTELFDLIFDY 181 (274)
Q Consensus 108 ~~~-~vLDiG~--G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~--d~~~~~~~~~~D~v~~~ 181 (274)
++. +||-.|+ |.|..+.++++ .|++|++++.+++.++.+++.-.. .-+..... +.......+.+|+|+..
T Consensus 148 ~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~----~~i~~~~~~~~~~~~~~~~~~d~vid~ 223 (328)
T 1xa0_A 148 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAK----EVLAREDVMAERIRPLDKQRWAAAVDP 223 (328)
T ss_dssp GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCS----EEEECC---------CCSCCEEEEEEC
T ss_pred CCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCc----EEEecCCcHHHHHHHhcCCcccEEEEC
Confidence 443 8999997 56677777766 788999999998888888653211 00111111 11111123469999854
Q ss_pred ccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 182 TFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 182 ~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
-.- ..+....++++++|.+++...
T Consensus 224 ~g~---------~~~~~~~~~l~~~G~~v~~G~ 247 (328)
T 1xa0_A 224 VGG---------RTLATVLSRMRYGGAVAVSGL 247 (328)
T ss_dssp STT---------TTHHHHHHTEEEEEEEEECSC
T ss_pred CcH---------HHHHHHHHhhccCCEEEEEee
Confidence 321 135677889999999887543
No 417
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=89.30 E-value=8.4 Score=31.95 Aligned_cols=62 Identities=19% Similarity=0.091 Sum_probs=44.4
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024021 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 168 (274)
..+++||=.|++.|. ++..|++.|++|++++.+++.++.+...+...+...++.++.+|+.+
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~ 70 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVAS 70 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTC
T ss_pred CCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCC
Confidence 345788888877653 23455558999999999998887777665544322368889999876
No 418
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=89.30 E-value=1.9 Score=34.62 Aligned_cols=102 Identities=13% Similarity=-0.005 Sum_probs=62.6
Q ss_pred CCeEEEEcCCcchhHH----HhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-----------C
Q 024021 109 KGRALVPGCGTGYDVV----AMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP-----------T 172 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~----~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-----------~ 172 (274)
+++||=.|+ +|.++. .|++ .|++|++++.++...+...+.+...+ .++.++.+|+.+... .
T Consensus 4 ~k~vlITGa-sggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (276)
T 1wma_A 4 IHVALVTGG-NKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG--LSPRFHQLDIDDLQSIRALRDFLRKEY 80 (276)
T ss_dssp CCEEEESSC-SSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC--CeeEEEECCCCCHHHHHHHHHHHHHhc
Confidence 456776664 555554 4455 78999999999877766655554433 468899999986211 1
Q ss_pred CCeeEEEeccccccc-----C-hhHH-----------HHHHHHHHhcccCCcEEEEEE
Q 024021 173 ELFDLIFDYTFFCAI-----E-PEMR-----------AAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 173 ~~~D~v~~~~~~~~~-----~-~~~~-----------~~~l~~~~~~L~pgG~~~~~~ 213 (274)
+.+|+++.+...... + .+.. ..+++.+...++++|.++.+.
T Consensus 81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~s 138 (276)
T 1wma_A 81 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVS 138 (276)
T ss_dssp SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEEC
Confidence 368999976543211 1 1221 234455666666677776654
No 419
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=89.30 E-value=3.1 Score=33.52 Aligned_cols=74 Identities=23% Similarity=0.205 Sum_probs=48.9
Q ss_pred CCCCCeEEEEcCCcchh---HHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC------CCCCCee
Q 024021 106 ALPKGRALVPGCGTGYD---VVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW------CPTELFD 176 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~---~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~------~~~~~~D 176 (274)
.+.++++|=-|++.|.- +..|++.|++|+..|.+.. +.+.+.....+ .++.++.+|+.+. ...++.|
T Consensus 6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g--~~~~~~~~Dv~d~~~v~~~~~~g~iD 81 (247)
T 4hp8_A 6 SLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDG--GNASALLIDFADPLAAKDSFTDAGFD 81 (247)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTT--CCEEEEECCTTSTTTTTTSSTTTCCC
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhC--CcEEEEEccCCCHHHHHHHHHhCCCC
Confidence 35677888888777643 4556669999999998742 22223333333 4688899999862 2235799
Q ss_pred EEEeccc
Q 024021 177 LIFDYTF 183 (274)
Q Consensus 177 ~v~~~~~ 183 (274)
+.+.+.-
T Consensus 82 iLVNNAG 88 (247)
T 4hp8_A 82 ILVNNAG 88 (247)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9998754
No 420
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=89.26 E-value=0.67 Score=39.47 Aligned_cols=92 Identities=21% Similarity=0.149 Sum_probs=55.7
Q ss_pred CCCeEEEEcCCc-chhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc-c--cCCCCCCCCeeEEEecc
Q 024021 108 PKGRALVPGCGT-GYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA-D--FFTWCPTELFDLIFDYT 182 (274)
Q Consensus 108 ~~~~vLDiG~G~-G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~-d--~~~~~~~~~~D~v~~~~ 182 (274)
++.+||-+|+|. |..+.++++ .|++|++++.+++..+.+++.+ +. +. ++.. + ..... .+.+|+|+..-
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~l---Ga-~~--vi~~~~~~~~~~~-~~g~D~vid~~ 252 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDL---GA-DD--YVIGSDQAKMSEL-ADSLDYVIDTV 252 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTS---CC-SC--EEETTCHHHHHHS-TTTEEEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHc---CC-ce--eeccccHHHHHHh-cCCCCEEEECC
Confidence 678999998752 444455555 6889999999988777776332 11 11 1111 1 00011 23699999543
Q ss_pred cccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 183 FFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 183 ~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
.-.. .++...++|+++|.++....
T Consensus 253 g~~~--------~~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 253 PVHH--------ALEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp CSCC--------CSHHHHTTEEEEEEEEECSC
T ss_pred CChH--------HHHHHHHHhccCCEEEEeCC
Confidence 2211 23567789999999887543
No 421
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=89.24 E-value=3 Score=34.30 Aligned_cols=106 Identities=17% Similarity=0.076 Sum_probs=65.6
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCC--hHHHHHHHHHhhcCCCCcceEEEEcccCCCCC----------
Q 024021 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEIS--DIAIKKAEELSSSLPNAKFVSFLKADFFTWCP---------- 171 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~vD~~--~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~---------- 171 (274)
..++++|=.|++.|. .+..|++.|++|+.++.+ ....+.........+ .++.++.+|+.+...
T Consensus 47 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~ 124 (294)
T 3r3s_A 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECG--RKAVLLPGDLSDESFARSLVHKARE 124 (294)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTT--CCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcC--CcEEEEEecCCCHHHHHHHHHHHHH
Confidence 456788888876552 234455589999999886 334444444444433 468899999987211
Q ss_pred -CCCeeEEEecccccc-------cChhHH-----------HHHHHHHHhcccCCcEEEEEEc
Q 024021 172 -TELFDLIFDYTFFCA-------IEPEMR-----------AAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 172 -~~~~D~v~~~~~~~~-------~~~~~~-----------~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
.+..|+++.+..... .+.+.+ ..+++.+...++++|.|+.+.-
T Consensus 125 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS 186 (294)
T 3r3s_A 125 ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSS 186 (294)
T ss_dssp HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECC
Confidence 146899998754321 222332 2345666777888888776553
No 422
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=89.23 E-value=0.84 Score=38.96 Aligned_cols=89 Identities=18% Similarity=0.114 Sum_probs=55.5
Q ss_pred CCeEEEEcCCc-chhHHHhhC-CCCeEEEEeCCh---HHHHHHHHHhhcCCCCcceEEEEc-ccCCCC--CCCCeeEEEe
Q 024021 109 KGRALVPGCGT-GYDVVAMAS-PERYVVGLEISD---IAIKKAEELSSSLPNAKFVSFLKA-DFFTWC--PTELFDLIFD 180 (274)
Q Consensus 109 ~~~vLDiG~G~-G~~~~~l~~-~~~~v~~vD~~~---~~~~~a~~~~~~~~~~~~~~~~~~-d~~~~~--~~~~~D~v~~ 180 (274)
+.+||-+|+|. |..+..+++ .|++|++++.++ +..+.+++.- .+.+.. |+.+.. ....+|+|+.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~g--------a~~v~~~~~~~~~~~~~~~~d~vid 252 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETK--------TNYYNSSNGYDKLKDSVGKFDVIID 252 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHT--------CEEEECTTCSHHHHHHHCCEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhC--------CceechHHHHHHHHHhCCCCCEEEE
Confidence 78999999832 334444444 688999999998 7777776542 122211 111100 0146999986
Q ss_pred cccccccChhHHHHHH-HHHHhcccCCcEEEEEE
Q 024021 181 YTFFCAIEPEMRAAWA-QKIKDFLKPDGELITLM 213 (274)
Q Consensus 181 ~~~~~~~~~~~~~~~l-~~~~~~L~pgG~~~~~~ 213 (274)
..... ..+ +...+.|+++|.++...
T Consensus 253 ~~g~~--------~~~~~~~~~~l~~~G~iv~~g 278 (366)
T 2cdc_A 253 ATGAD--------VNILGNVIPLLGRNGVLGLFG 278 (366)
T ss_dssp CCCCC--------THHHHHHGGGEEEEEEEEECS
T ss_pred CCCCh--------HHHHHHHHHHHhcCCEEEEEe
Confidence 43321 134 77889999999988754
No 423
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=89.17 E-value=2.8 Score=33.95 Aligned_cols=76 Identities=17% Similarity=0.035 Sum_probs=50.9
Q ss_pred CCCeEEEEcCCcchhHH----HhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-----------C
Q 024021 108 PKGRALVPGCGTGYDVV----AMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP-----------T 172 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~----~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-----------~ 172 (274)
.++++|=.|++ |.++. .|++.|++|++++.++..++.....+...+...++.++.+|+.+... .
T Consensus 31 ~~k~vlVTGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 109 (279)
T 1xg5_A 31 RDRLALVTGAS-GGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH 109 (279)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 35678877765 44444 44458999999999988777665555444333468889999987211 1
Q ss_pred CCeeEEEecccc
Q 024021 173 ELFDLIFDYTFF 184 (274)
Q Consensus 173 ~~~D~v~~~~~~ 184 (274)
+.+|+++.+...
T Consensus 110 g~iD~vi~~Ag~ 121 (279)
T 1xg5_A 110 SGVDICINNAGL 121 (279)
T ss_dssp CCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 368999976543
No 424
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=89.10 E-value=0.15 Score=43.35 Aligned_cols=88 Identities=15% Similarity=0.149 Sum_probs=58.1
Q ss_pred CCCCeEEEEcC--CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-------CCCCCCee
Q 024021 107 LPKGRALVPGC--GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-------WCPTELFD 176 (274)
Q Consensus 107 ~~~~~vLDiG~--G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-------~~~~~~~D 176 (274)
.++.+||-+|+ |.|..+..+++ .|++|+++ .+++.++.+++.- .+.+. +-.+ ......+|
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lG--------a~~i~-~~~~~~~~~~~~~~~~g~D 218 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLG--------ATPID-ASREPEDYAAEHTAGQGFD 218 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHT--------SEEEE-TTSCHHHHHHHHHTTSCEE
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcC--------CCEec-cCCCHHHHHHHHhcCCCce
Confidence 45689999994 45666667766 78899999 8888888886642 11122 1111 11234799
Q ss_pred EEEecccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024021 177 LIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 177 ~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 213 (274)
+|+..-. . ..+....++|+++|.+++..
T Consensus 219 ~vid~~g-----~----~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 219 LVYDTLG-----G----PVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp EEEESSC-----T----HHHHHHHHHEEEEEEEEESC
T ss_pred EEEECCC-----c----HHHHHHHHHHhcCCeEEEEc
Confidence 9985322 1 24677888999999988754
No 425
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=89.07 E-value=2.2 Score=37.58 Aligned_cols=94 Identities=12% Similarity=0.050 Sum_probs=59.9
Q ss_pred CCCCeEEEEcC--CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEccc-----------------
Q 024021 107 LPKGRALVPGC--GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADF----------------- 166 (274)
Q Consensus 107 ~~~~~vLDiG~--G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~----------------- 166 (274)
.++.+||=+|+ |.|..+..+++ .|+++++++.+++.++.+++.-... -+.....|+
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa~~----vi~~~~~d~~~~~~~~~~~~~~~~~~ 302 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEA----IIDRNAEGYRFWKDENTQDPKEWKRF 302 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCCE----EEETTTTTCCSEEETTEECHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCcE----EEecCcCcccccccccccchHHHHHH
Confidence 45679999986 45666667766 7899999999999999887643110 011001111
Q ss_pred ----CCCCCCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024021 167 ----FTWCPTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 167 ----~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 213 (274)
.+......+|+|+..-. . ..+....++|++||.+++..
T Consensus 303 ~~~i~~~t~g~g~Dvvid~~G-----~----~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 303 GKRIRELTGGEDIDIVFEHPG-----R----ETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp HHHHHHHHTSCCEEEEEECSC-----H----HHHHHHHHHEEEEEEEEESC
T ss_pred HHHHHHHhCCCCCcEEEEcCC-----c----hhHHHHHHHhhCCcEEEEEe
Confidence 00112357999985322 1 34677888999999988754
No 426
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=88.77 E-value=3.1 Score=33.74 Aligned_cols=86 Identities=16% Similarity=0.132 Sum_probs=52.2
Q ss_pred eEEEEcCCcc-h-hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccccccC
Q 024021 111 RALVPGCGTG-Y-DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFCAIE 188 (274)
Q Consensus 111 ~vLDiG~G~G-~-~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~~~ 188 (274)
+|.=||||.= . ++..+.+.|.+|+++|.+++.++.+.+. +... . ...|..+. ...|+|+.. ++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~----g~~~--~-~~~~~~~~---~~~D~vi~a-----v~ 66 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVER----QLVD--E-AGQDLSLL---QTAKIIFLC-----TP 66 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT----TSCS--E-EESCGGGG---TTCSEEEEC-----SC
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhC----CCCc--c-ccCCHHHh---CCCCEEEEE-----CC
Confidence 5677887642 1 2233445788999999999887766432 2111 1 12233222 457988853 34
Q ss_pred hhHHHHHHHHHHhcccCCcEEEE
Q 024021 189 PEMRAAWAQKIKDFLKPDGELIT 211 (274)
Q Consensus 189 ~~~~~~~l~~~~~~L~pgG~~~~ 211 (274)
+.....+++.+...++++..++-
T Consensus 67 ~~~~~~~~~~l~~~~~~~~~vv~ 89 (279)
T 2f1k_A 67 IQLILPTLEKLIPHLSPTAIVTD 89 (279)
T ss_dssp HHHHHHHHHHHGGGSCTTCEEEE
T ss_pred HHHHHHHHHHHHhhCCCCCEEEE
Confidence 45566788888888888776543
No 427
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=88.72 E-value=5.1 Score=32.12 Aligned_cols=108 Identities=13% Similarity=0.106 Sum_probs=69.4
Q ss_pred CCCCCeEEEEcCC----cch-hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC----------
Q 024021 106 ALPKGRALVPGCG----TGY-DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC---------- 170 (274)
Q Consensus 106 ~~~~~~vLDiG~G----~G~-~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---------- 170 (274)
.+.++++|=-|++ -|. .+..|++.|++|+.++.+++..+.+.+.....+. .++.++.+|+.+..
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQ-PEAHLYQIDVQSDEEVINGFEQIG 81 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTC-SSCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-CcEEEEEccCCCHHHHHHHHHHHH
Confidence 4567888988853 332 3456677999999999998888877776655432 46889999998721
Q ss_pred -CCCCeeEEEecccccc----------cChhHHH-----------HHHHHHHhcccCCcEEEEEEc
Q 024021 171 -PTELFDLIFDYTFFCA----------IEPEMRA-----------AWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 171 -~~~~~D~v~~~~~~~~----------~~~~~~~-----------~~l~~~~~~L~pgG~~~~~~~ 214 (274)
.-++.|+++.+..+.. .+.+.+. .........++.+|.|+....
T Consensus 82 ~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS 147 (256)
T 4fs3_A 82 KDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTY 147 (256)
T ss_dssp HHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEEC
T ss_pred HHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEec
Confidence 1257899987644321 1112221 122344566778898876553
No 428
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=88.57 E-value=6.2 Score=31.60 Aligned_cols=104 Identities=22% Similarity=0.162 Sum_probs=58.3
Q ss_pred CCCeEEEEcCCc-chhHH----HhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC-----------C
Q 024021 108 PKGRALVPGCGT-GYDVV----AMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC-----------P 171 (274)
Q Consensus 108 ~~~~vLDiG~G~-G~~~~----~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-----------~ 171 (274)
.++++|=.|++. |..+. .|++.|++|+.++.++...+...+..... ++..++.+|+.+.. .
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQL---GSDIVLQCDVAEDASIDTMFAELGKV 84 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHT---TCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhc---CCcEEEEccCCCHHHHHHHHHHHHHH
Confidence 456788888752 44444 44458999999998762112222221111 12467888987621 1
Q ss_pred CCCeeEEEecccccc-----------cChhHHH-----------HHHHHHHhcccCCcEEEEEEc
Q 024021 172 TELFDLIFDYTFFCA-----------IEPEMRA-----------AWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 172 ~~~~D~v~~~~~~~~-----------~~~~~~~-----------~~l~~~~~~L~pgG~~~~~~~ 214 (274)
.++.|+++.+..+.. .+.+.+. .+++.+...++++|.++.+..
T Consensus 85 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 149 (265)
T 1qsg_A 85 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSY 149 (265)
T ss_dssp CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred cCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcc
Confidence 246899998765432 2323222 233455566656677776553
No 429
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=88.38 E-value=10 Score=31.67 Aligned_cols=94 Identities=13% Similarity=0.113 Sum_probs=58.5
Q ss_pred CCCCCeEEEEcCCcc-hhHHHhhC-CCC-eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc---ccCC----CCCCCCe
Q 024021 106 ALPKGRALVPGCGTG-YDVVAMAS-PER-YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA---DFFT----WCPTELF 175 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G-~~~~~l~~-~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~---d~~~----~~~~~~~ 175 (274)
..++.+||=.|+|.. ..+.++++ .|+ .++++|.+++.++.+++.-. ...+.. |..+ ......+
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa-------~~~i~~~~~~~~~~~~~~~~~~g~ 230 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGA-------MQTFNSSEMSAPQMQSVLRELRFN 230 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC-------SEEEETTTSCHHHHHHHHGGGCSS
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCC-------eEEEeCCCCCHHHHHHhhcccCCc
Confidence 456689999998653 33445555 676 57899999999888876531 112221 1111 1123457
Q ss_pred eEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 176 DLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 176 D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
|+|+....- ...++...++|++||.+++...
T Consensus 231 d~v~d~~G~--------~~~~~~~~~~l~~~G~~v~~g~ 261 (346)
T 4a2c_A 231 QLILETAGV--------PQTVELAVEIAGPHAQLALVGT 261 (346)
T ss_dssp EEEEECSCS--------HHHHHHHHHHCCTTCEEEECCC
T ss_pred ccccccccc--------cchhhhhhheecCCeEEEEEec
Confidence 888743211 2356778899999999887553
No 430
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=87.89 E-value=8.4 Score=30.71 Aligned_cols=59 Identities=14% Similarity=0.122 Sum_probs=42.8
Q ss_pred CCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024021 108 PKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 108 ~~~~vLDiG~G~G~---~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 168 (274)
.++++|=.|++.|. .+..|++.|++|+.++.+++.++.+...+...+ .++.++.+|+.+
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~ 66 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFP--GQILTVQMDVRN 66 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCST--TCEEEEECCTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCC
Confidence 45678877766542 234455589999999999988888777665443 468888999875
No 431
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=87.67 E-value=1.7 Score=37.07 Aligned_cols=65 Identities=22% Similarity=0.188 Sum_probs=41.7
Q ss_pred CCCCeEEEEcCCcchhHHHhh---CCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC----CCCCeeEEE
Q 024021 107 LPKGRALVPGCGTGYDVVAMA---SPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC----PTELFDLIF 179 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~l~---~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~D~v~ 179 (274)
...++||=+|| |..+..++ .....|+..|.+.+.++.++.. +..+..|+.+.. .-..+|+|+
T Consensus 14 g~~mkilvlGa--G~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~~~---------~~~~~~d~~d~~~l~~~~~~~DvVi 82 (365)
T 3abi_A 14 GRHMKVLILGA--GNIGRAIAWDLKDEFDVYIGDVNNENLEKVKEF---------ATPLKVDASNFDKLVEVMKEFELVI 82 (365)
T ss_dssp --CCEEEEECC--SHHHHHHHHHHTTTSEEEEEESCHHHHHHHTTT---------SEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CCccEEEEECC--CHHHHHHHHHHhcCCCeEEEEcCHHHHHHHhcc---------CCcEEEecCCHHHHHHHHhCCCEEE
Confidence 34578999998 44554433 3567899999999887766432 455667776511 114689998
Q ss_pred ecc
Q 024021 180 DYT 182 (274)
Q Consensus 180 ~~~ 182 (274)
...
T Consensus 83 ~~~ 85 (365)
T 3abi_A 83 GAL 85 (365)
T ss_dssp ECC
T ss_pred Eec
Confidence 653
No 432
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=87.65 E-value=3.6 Score=32.94 Aligned_cols=75 Identities=16% Similarity=0.018 Sum_probs=50.7
Q ss_pred CCCCeEEEEcCCcchhH----HHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-----------
Q 024021 107 LPKGRALVPGCGTGYDV----VAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP----------- 171 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~----~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~----------- 171 (274)
..++++|=.|++.| .+ ..|++.|++|+.++.+++..+...+.+...+ .++.++.+|+.+...
T Consensus 7 l~~k~vlVTGas~g-iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (260)
T 2ae2_A 7 LEGCTALVTGGSRG-IGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG--FKVEASVCDLSSRSERQELMNTVANH 83 (260)
T ss_dssp CTTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 34577887776544 44 3445589999999999887766555544332 468889999987210
Q ss_pred C-CCeeEEEecccc
Q 024021 172 T-ELFDLIFDYTFF 184 (274)
Q Consensus 172 ~-~~~D~v~~~~~~ 184 (274)
. +..|+++.+..+
T Consensus 84 ~~g~id~lv~~Ag~ 97 (260)
T 2ae2_A 84 FHGKLNILVNNAGI 97 (260)
T ss_dssp TTTCCCEEEECCCC
T ss_pred cCCCCCEEEECCCC
Confidence 1 578999987543
No 433
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=87.51 E-value=6.5 Score=31.37 Aligned_cols=73 Identities=15% Similarity=0.078 Sum_probs=50.4
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-----------C
Q 024021 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP-----------T 172 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-----------~ 172 (274)
..++++|=.|++.|. .+..|++.|++|+.+|.+++..+....... .++.++.+|+.+... .
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~ 80 (259)
T 4e6p_A 6 LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIG-----PAAYAVQMDVTRQDSIDAAIAATVEHA 80 (259)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-----TTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-----CCceEEEeeCCCHHHHHHHHHHHHHHc
Confidence 446788888866552 234555689999999999887766655542 358899999987211 1
Q ss_pred CCeeEEEecccc
Q 024021 173 ELFDLIFDYTFF 184 (274)
Q Consensus 173 ~~~D~v~~~~~~ 184 (274)
++.|+++.+...
T Consensus 81 g~id~lv~~Ag~ 92 (259)
T 4e6p_A 81 GGLDILVNNAAL 92 (259)
T ss_dssp SSCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 368999987543
No 434
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=86.95 E-value=7 Score=31.30 Aligned_cols=76 Identities=14% Similarity=0.021 Sum_probs=49.4
Q ss_pred CCCeEEEEcCCcchhH----HHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-----------C
Q 024021 108 PKGRALVPGCGTGYDV----VAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP-----------T 172 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~----~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-----------~ 172 (274)
.++++|=.|++.| .+ ..|++.|++|++++.+++..+.....+.......++.++.+|+.+... .
T Consensus 6 ~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (267)
T 2gdz_A 6 NGKVALVTGAAQG-IGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF 84 (267)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCc-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence 3567888886544 44 344558999999999987766555444332112468899999987211 1
Q ss_pred CCeeEEEecccc
Q 024021 173 ELFDLIFDYTFF 184 (274)
Q Consensus 173 ~~~D~v~~~~~~ 184 (274)
++.|+++.+...
T Consensus 85 g~id~lv~~Ag~ 96 (267)
T 2gdz_A 85 GRLDILVNNAGV 96 (267)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 357999987654
No 435
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=86.84 E-value=10 Score=30.70 Aligned_cols=58 Identities=17% Similarity=0.083 Sum_probs=42.1
Q ss_pred CCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024021 109 KGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 109 ~~~vLDiG~G~G~---~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 168 (274)
++++|=.|++.|. .+..|++.|++|+.++.+++.++...+.+...+ .++.++.+|+.+
T Consensus 24 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d 84 (279)
T 3sju_A 24 PQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAG--HDVDGSSCDVTS 84 (279)
T ss_dssp -CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT--CCEEEEECCTTC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCC
Confidence 5678888876552 234555589999999999988877776665543 468888888875
No 436
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=86.78 E-value=3.7 Score=32.83 Aligned_cols=72 Identities=10% Similarity=-0.000 Sum_probs=47.4
Q ss_pred CCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-----------CC
Q 024021 108 PKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP-----------TE 173 (274)
Q Consensus 108 ~~~~vLDiG~G~G~---~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-----------~~ 173 (274)
.++++|=.|++.|. .+..|++.|++|+.++.+++..+...+.. ..++.++.+|+.+... .+
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (254)
T 1hdc_A 4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDVTIEEDWQRVVAYAREEFG 78 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 45678888765542 23344558999999999987665544333 1458889999976211 13
Q ss_pred CeeEEEecccc
Q 024021 174 LFDLIFDYTFF 184 (274)
Q Consensus 174 ~~D~v~~~~~~ 184 (274)
+.|+++.+..+
T Consensus 79 ~iD~lv~nAg~ 89 (254)
T 1hdc_A 79 SVDGLVNNAGI 89 (254)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999987543
No 437
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=86.74 E-value=3.6 Score=33.15 Aligned_cols=78 Identities=14% Similarity=0.045 Sum_probs=51.7
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC-------CCCCee
Q 024021 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC-------PTELFD 176 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-------~~~~~D 176 (274)
..++++|=.|++.|. .+..+++.|++|+.++.+++..+...+.+...+....+.++.+|+.+.. .-++.|
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id 87 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVD 87 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCS
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCC
Confidence 446778887766542 2344555899999999998877766655543322246788899987621 124689
Q ss_pred EEEecccc
Q 024021 177 LIFDYTFF 184 (274)
Q Consensus 177 ~v~~~~~~ 184 (274)
+++.+...
T Consensus 88 ~lv~nAg~ 95 (267)
T 3t4x_A 88 ILINNLGI 95 (267)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99977543
No 438
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=86.72 E-value=6.4 Score=31.92 Aligned_cols=104 Identities=17% Similarity=0.088 Sum_probs=61.1
Q ss_pred CCCCeEEEEcCCcchhHH----HhhCCCCeEEEEeCChHH-HHHHHHHhhcCCCCcceEEEEcccCCCCC----------
Q 024021 107 LPKGRALVPGCGTGYDVV----AMASPERYVVGLEISDIA-IKKAEELSSSLPNAKFVSFLKADFFTWCP---------- 171 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~----~l~~~~~~v~~vD~~~~~-~~~a~~~~~~~~~~~~~~~~~~d~~~~~~---------- 171 (274)
..++++|=.|++.| .+. .|++.|++|+.++.++.. .+...+.+...+ .++.++.+|+.+...
T Consensus 27 ~~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~ 103 (283)
T 1g0o_A 27 LEGKVALVTGAGRG-IGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG--SDAACVKANVGVVEDIVRMFEEAVK 103 (283)
T ss_dssp CTTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhC--CCeEEEEcCCCCHHHHHHHHHHHHH
Confidence 34567777776544 444 444589999999987643 333333333332 468889999876210
Q ss_pred -CCCeeEEEecccccc------cChhHHH-----------HHHHHHHhcccCCcEEEEEE
Q 024021 172 -TELFDLIFDYTFFCA------IEPEMRA-----------AWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 172 -~~~~D~v~~~~~~~~------~~~~~~~-----------~~l~~~~~~L~pgG~~~~~~ 213 (274)
.+..|+++.+..+.. .+.+.+. .+++.+...++.+|.++.+.
T Consensus 104 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 163 (283)
T 1g0o_A 104 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMG 163 (283)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEEC
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 136899998754332 2223322 23455666666678777654
No 439
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=86.60 E-value=3.2 Score=32.18 Aligned_cols=126 Identities=10% Similarity=0.021 Sum_probs=69.7
Q ss_pred eEEEEcCCcchhH----HHhh-CCCCeEEEEeCChH-HHHHHHHHhhcCCCCcceEEEEcccCCCC----CCCCeeEEEe
Q 024021 111 RALVPGCGTGYDV----VAMA-SPERYVVGLEISDI-AIKKAEELSSSLPNAKFVSFLKADFFTWC----PTELFDLIFD 180 (274)
Q Consensus 111 ~vLDiG~G~G~~~----~~l~-~~~~~v~~vD~~~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~D~v~~ 180 (274)
+||=.|+ +|..+ ..|+ +.|++|++++.+++ .++.... . ..++.++.+|+.+.. .-..+|+|+.
T Consensus 7 ~vlVtGa-sg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~---~---~~~~~~~~~D~~d~~~~~~~~~~~d~vv~ 79 (221)
T 3r6d_A 7 YITILGA-AGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEII---D---HERVTVIEGSFQNPGXLEQAVTNAEVVFV 79 (221)
T ss_dssp EEEEEST-TSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHH---T---STTEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred EEEEEeC-CcHHHHHHHHHHHhcCCceEEEEecCccccchhhcc---C---CCceEEEECCCCCHHHHHHHHcCCCEEEE
Confidence 4777774 44443 4455 58899999999876 4433221 1 146899999998621 1136899997
Q ss_pred cccccccChhHHHHHHHHHHhcccCCcEEEE-EEccCCCCCCCC-----------CcccCHHHHHHHHhcCCCcEEEEee
Q 024021 181 YTFFCAIEPEMRAAWAQKIKDFLKPDGELIT-LMFPISDHVGGP-----------PYKVSVSDYEEVLQPMGFQAISIVD 248 (274)
Q Consensus 181 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~-~~~~~~~~~~~~-----------~~~~~~~~~~~~l~~~Gf~~~~~~~ 248 (274)
+.....+ . ...+++.+.+ ...|.++. ..........+. .|..+.....++++..|+...-+..
T Consensus 80 ~ag~~n~--~-~~~~~~~~~~--~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~i~~~~vrp 154 (221)
T 3r6d_A 80 GAMESGS--D-MASIVKALSR--XNIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRESNLNYTILRL 154 (221)
T ss_dssp SCCCCHH--H-HHHHHHHHHH--TTCCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred cCCCCCh--h-HHHHHHHHHh--cCCCeEEEEeeceecCCCCcccccccccccccHHHHHHHHHHHHHHhCCCCEEEEec
Confidence 7654322 1 2333333332 11244544 433322211110 2333467778888888887765554
No 440
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=86.49 E-value=11 Score=30.11 Aligned_cols=60 Identities=10% Similarity=0.035 Sum_probs=44.6
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024021 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 168 (274)
..++++|=.|++.|. .+..|++.|++|+.++.+++.++...+.+...+ .++.++.+|+.+
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~ 71 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG--RRALSVGTDITD 71 (264)
T ss_dssp TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTC
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCC
Confidence 446788888887663 234556689999999999988877776665543 468889999875
No 441
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=86.32 E-value=11 Score=30.10 Aligned_cols=63 Identities=16% Similarity=0.069 Sum_probs=43.4
Q ss_pred CCCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024021 106 ALPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 168 (274)
...++++|=.|++.|. .+..+++.|++|+.++.+++.++...+.+.......++.++.+|+.+
T Consensus 5 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~ 70 (265)
T 3lf2_A 5 DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLD 70 (265)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTC
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCC
Confidence 3456788888877653 23455568999999999998877776655431111348888888875
No 442
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=86.19 E-value=1.7 Score=36.31 Aligned_cols=91 Identities=16% Similarity=0.126 Sum_probs=58.2
Q ss_pred CCC-eEEEEcC--CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc-cc----CCCCCCCCeeEE
Q 024021 108 PKG-RALVPGC--GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA-DF----FTWCPTELFDLI 178 (274)
Q Consensus 108 ~~~-~vLDiG~--G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~-d~----~~~~~~~~~D~v 178 (274)
++. +||-.|+ |.|..+..+++ .|+++++++.+++.++.+++.-. + ..+.. +. ........+|+|
T Consensus 149 ~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa-----~--~v~~~~~~~~~~~~~~~~~~~d~v 221 (330)
T 1tt7_A 149 PEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGA-----S--EVISREDVYDGTLKALSKQQWQGA 221 (330)
T ss_dssp GGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTC-----S--EEEEHHHHCSSCCCSSCCCCEEEE
T ss_pred CCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC-----c--EEEECCCchHHHHHHhhcCCccEE
Confidence 443 8999996 55666666666 68899999999888888876421 1 11111 11 111223469999
Q ss_pred EecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 179 FDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 179 ~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
+..-. . ..+....++++++|.+++...
T Consensus 222 id~~g-----~----~~~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 222 VDPVG-----G----KQLASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp EESCC-----T----HHHHHHHTTEEEEEEEEECCC
T ss_pred EECCc-----H----HHHHHHHHhhcCCCEEEEEec
Confidence 85322 1 246778899999999887543
No 443
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=85.90 E-value=2.7 Score=34.09 Aligned_cols=77 Identities=12% Similarity=0.030 Sum_probs=53.8
Q ss_pred CCCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC-----------C
Q 024021 106 ALPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC-----------P 171 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-----------~ 171 (274)
...++++|=.|++.|. .+..|++.|++|+.++.+++.++...+.+...+ .++.++.+|+.+.. .
T Consensus 23 ~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 100 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVG--HDAEAVAFDVTSESEIIEAFARLDEQ 100 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT--CCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3556788888866552 234555589999999999988877766665543 46889999998721 1
Q ss_pred CCCeeEEEecccc
Q 024021 172 TELFDLIFDYTFF 184 (274)
Q Consensus 172 ~~~~D~v~~~~~~ 184 (274)
.++.|+++.+..+
T Consensus 101 ~g~iD~lv~nAg~ 113 (271)
T 4ibo_A 101 GIDVDILVNNAGI 113 (271)
T ss_dssp TCCCCEEEECCCC
T ss_pred CCCCCEEEECCCC
Confidence 2468999987543
No 444
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=85.87 E-value=11 Score=30.23 Aligned_cols=58 Identities=9% Similarity=-0.056 Sum_probs=41.5
Q ss_pred CCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024021 109 KGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 109 ~~~vLDiG~G~G~---~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 168 (274)
++++|=.|++.|. .+..|++.|++|+.++.+++.++...+.+...+ .++.++.+|+.+
T Consensus 4 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d 64 (264)
T 3tfo_A 4 DKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAG--GTALAQVLDVTD 64 (264)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT--CEEEEEECCTTC
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEcCCCC
Confidence 4677777776552 234455589999999999988877776665543 467888888875
No 445
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=85.53 E-value=13 Score=31.74 Aligned_cols=99 Identities=13% Similarity=-0.003 Sum_probs=65.7
Q ss_pred CCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCc-ceEEEEcccCCCCCCCCeeEEEecccccc
Q 024021 108 PKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAK-FVSFLKADFFTWCPTELFDLIFDYTFFCA 186 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~D~v~~~~~~~~ 186 (274)
.+.+||.++.+.|.++..++.. .++.+.-|--.....+.|...++..+ ++++... .+ .....||+|+....=
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~--~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~--~~-~~~~~~~~v~~~lpk-- 110 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH--KPYSIGDSYISELATRENLRLNGIDESSVKFLDS--TA-DYPQQPGVVLIKVPK-- 110 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG--CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEET--TS-CCCSSCSEEEEECCS--
T ss_pred CCCCEEEECCCCCHHHHhhccC--CceEEEhHHHHHHHHHHHHHHcCCCccceEeccc--cc-ccccCCCEEEEEcCC--
Confidence 4468999999999999888753 34555435555555666777776543 3565433 22 234579998853321
Q ss_pred cChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 187 IEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 187 ~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
........+..+...|++|+.+++...
T Consensus 111 -~~~~l~~~L~~l~~~l~~~~~i~~~g~ 137 (375)
T 4dcm_A 111 -TLALLEQQLRALRKVVTSDTRIIAGAK 137 (375)
T ss_dssp -CHHHHHHHHHHHHTTCCTTSEEEEEEE
T ss_pred -CHHHHHHHHHHHHhhCCCCCEEEEEec
Confidence 224556778999999999999877653
No 446
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=85.43 E-value=8.9 Score=30.74 Aligned_cols=67 Identities=12% Similarity=0.154 Sum_probs=44.5
Q ss_pred CeEEEEcCCcchh---HHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-----------CCCe
Q 024021 110 GRALVPGCGTGYD---VVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP-----------TELF 175 (274)
Q Consensus 110 ~~vLDiG~G~G~~---~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-----------~~~~ 175 (274)
++||=-|++.|.- +..|++.|++|+.+|.+++..+...+. . .++.++.+|+.+... -++.
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~---~---~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~i 76 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE---R---PNLFYFHGDVADPLTLKKFVEYAMEKLQRI 76 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT---C---TTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---c---CCEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 4677777777632 455666999999999998766544322 1 458888899876211 1457
Q ss_pred eEEEecc
Q 024021 176 DLIFDYT 182 (274)
Q Consensus 176 D~v~~~~ 182 (274)
|+++.+.
T Consensus 77 DiLVNNA 83 (247)
T 3ged_A 77 DVLVNNA 83 (247)
T ss_dssp CEEEECC
T ss_pred CEEEECC
Confidence 7777654
No 447
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=85.27 E-value=8.4 Score=31.19 Aligned_cols=61 Identities=20% Similarity=0.163 Sum_probs=44.0
Q ss_pred CCCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024021 106 ALPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 168 (274)
...++++|=.|++.|. .+..|++.|++|+.++.+++.++...+.+...+ .++.++.+|+.+
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d 92 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVG--GKALPIRCDVTQ 92 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT--CCCEEEECCTTC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCC
Confidence 4567888888877553 234555689999999999877777666655443 468888899875
No 448
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=84.99 E-value=14 Score=30.05 Aligned_cols=98 Identities=12% Similarity=0.047 Sum_probs=54.5
Q ss_pred CeEEEEcCCcchh--HHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-CCCC---CCeeEEEeccc
Q 024021 110 GRALVPGCGTGYD--VVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-WCPT---ELFDLIFDYTF 183 (274)
Q Consensus 110 ~~vLDiG~G~G~~--~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~---~~~D~v~~~~~ 183 (274)
++|.=+|+|.=.. +..+++.|.+|+.+|.+++.++..++........+.......+... .... ..+|+|+..
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~-- 81 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIAL-- 81 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEEC--
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEE--
Confidence 4788898864222 2344457889999999998877766542100000000000001111 0111 268988853
Q ss_pred ccccChhHHHHHHHHHHhcccCCcEEEEE
Q 024021 184 FCAIEPEMRAAWAQKIKDFLKPDGELITL 212 (274)
Q Consensus 184 ~~~~~~~~~~~~l~~~~~~L~pgG~~~~~ 212 (274)
++......+++.+...++++..++..
T Consensus 82 ---v~~~~~~~v~~~l~~~l~~~~~iv~~ 107 (316)
T 2ew2_A 82 ---TKAQQLDAMFKAIQPMITEKTYVLCL 107 (316)
T ss_dssp ---SCHHHHHHHHHHHGGGCCTTCEEEEC
T ss_pred ---eccccHHHHHHHHHHhcCCCCEEEEe
Confidence 33445577888888888888766654
No 449
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=84.59 E-value=6.6 Score=31.80 Aligned_cols=87 Identities=17% Similarity=0.136 Sum_probs=51.2
Q ss_pred eEEEEcCCc-ch-hHHHhhCCCC--eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCC-CeeEEEeccccc
Q 024021 111 RALVPGCGT-GY-DVVAMASPER--YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTE-LFDLIFDYTFFC 185 (274)
Q Consensus 111 ~vLDiG~G~-G~-~~~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~D~v~~~~~~~ 185 (274)
+|.=||+|. |. ++..+++.|. +|+++|.+++.++.+++. +... . ...|..+.. . ..|+|+..
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~----g~~~--~-~~~~~~~~~--~~~aDvVila---- 69 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL----GIID--E-GTTSIAKVE--DFSPDFVMLS---- 69 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT----TSCS--E-EESCGGGGG--GTCCSEEEEC----
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHC----CCcc--c-ccCCHHHHh--cCCCCEEEEc----
Confidence 577787654 21 2233344676 899999999887776532 2111 1 122332222 2 57888843
Q ss_pred ccChhHHHHHHHHHHhcccCCcEEEE
Q 024021 186 AIEPEMRAAWAQKIKDFLKPDGELIT 211 (274)
Q Consensus 186 ~~~~~~~~~~l~~~~~~L~pgG~~~~ 211 (274)
+++.....++..+...++++..++.
T Consensus 70 -vp~~~~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 70 -SPVRTFREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp -SCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred -CCHHHHHHHHHHHHhhCCCCcEEEE
Confidence 4444556777888888888875554
No 450
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=84.56 E-value=3.6 Score=33.65 Aligned_cols=96 Identities=16% Similarity=0.086 Sum_probs=56.3
Q ss_pred CeEEEEcCCcc--hhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcC---------CCC--------cceEEEEcccCCCC
Q 024021 110 GRALVPGCGTG--YDVVAMASPERYVVGLEISDIAIKKAEELSSSL---------PNA--------KFVSFLKADFFTWC 170 (274)
Q Consensus 110 ~~vLDiG~G~G--~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~---------~~~--------~~~~~~~~d~~~~~ 170 (274)
.+|.=||+|.= ..+..++..|.+|+.+|.+++.++.+++..... +.. .++.. ..|..+..
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~~~~ 83 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLAQAV 83 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHHHHh
Confidence 46777887652 223344458999999999999988887653110 000 11222 22222211
Q ss_pred CCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEE
Q 024021 171 PTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELIT 211 (274)
Q Consensus 171 ~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~ 211 (274)
...|+|+..-.- +.+....++.++...++|+.+++.
T Consensus 84 --~~aDlVi~av~~---~~~~~~~v~~~l~~~~~~~~il~s 119 (283)
T 4e12_A 84 --KDADLVIEAVPE---SLDLKRDIYTKLGELAPAKTIFAT 119 (283)
T ss_dssp --TTCSEEEECCCS---CHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred --ccCCEEEEeccC---cHHHHHHHHHHHHhhCCCCcEEEE
Confidence 357988853221 113556788889999998876653
No 451
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=84.39 E-value=4.4 Score=35.49 Aligned_cols=93 Identities=13% Similarity=0.018 Sum_probs=58.6
Q ss_pred CCCCeEEEEcC--CcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccC----------------
Q 024021 107 LPKGRALVPGC--GTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFF---------------- 167 (274)
Q Consensus 107 ~~~~~vLDiG~--G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~---------------- 167 (274)
.++.+||=.|+ |.|..+..+++ .|+++++++.+++.++.+++.-. ..-+.....|+.
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa----~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 294 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGC----DLVINRAELGITDDIADDPRRVVETGRK 294 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC----CCEEEHHHHTCCTTGGGCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC----CEEEecccccccccccccccccchhhhH
Confidence 45689999986 44566666666 78999999999998888865321 111111111210
Q ss_pred ------CCCCCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024021 168 ------TWCPTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 168 ------~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 213 (274)
+.. ...+|+|+....- ..+....++|++||.++...
T Consensus 295 ~~~~v~~~~-g~g~Dvvid~~G~---------~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 295 LAKLVVEKA-GREPDIVFEHTGR---------VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHH-SSCCSEEEECSCH---------HHHHHHHHHSCTTCEEEESC
T ss_pred HHHHHHHHh-CCCceEEEECCCc---------hHHHHHHHHHhcCCEEEEEe
Confidence 011 3469999853221 24567788999999988754
No 452
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=84.37 E-value=7.6 Score=31.43 Aligned_cols=61 Identities=16% Similarity=0.081 Sum_probs=42.5
Q ss_pred CCCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024021 106 ALPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 168 (274)
...++++|=.|++.|. .+..|++.|++|+.++.+++..+.........+ .++.++.+|+.+
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~ 93 (275)
T 4imr_A 30 GLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASG--GTAQELAGDLSE 93 (275)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTT--CCEEEEECCTTS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CeEEEEEecCCC
Confidence 3556788888766552 234455589999999998877766666554443 468888999875
No 453
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=84.26 E-value=5.8 Score=32.12 Aligned_cols=75 Identities=15% Similarity=0.059 Sum_probs=49.9
Q ss_pred CCCeEEEEcCCcchhH----HHhhCCCCeEEEEeCChHHHHHHHHHhhcCCC-CcceEEEEcccCCCCC-----------
Q 024021 108 PKGRALVPGCGTGYDV----VAMASPERYVVGLEISDIAIKKAEELSSSLPN-AKFVSFLKADFFTWCP----------- 171 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~~----~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~~~d~~~~~~----------- 171 (274)
.++++|=.|++.| .+ ..|++.|++|+.++.+++.++...+.+...+. ..++.++.+|+.+...
T Consensus 5 ~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (280)
T 1xkq_A 5 SNKTVIITGSSNG-IGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ 83 (280)
T ss_dssp TTCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence 4567777776554 44 34455899999999998877766555544321 1268899999987210
Q ss_pred CCCeeEEEeccc
Q 024021 172 TELFDLIFDYTF 183 (274)
Q Consensus 172 ~~~~D~v~~~~~ 183 (274)
.+++|+++.+..
T Consensus 84 ~g~iD~lv~nAg 95 (280)
T 1xkq_A 84 FGKIDVLVNNAG 95 (280)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 136899998754
No 454
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=84.12 E-value=6.9 Score=33.25 Aligned_cols=96 Identities=9% Similarity=-0.018 Sum_probs=59.4
Q ss_pred CeEEEEcCCcch--hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcC------CCCcceEEEEcccCCCCCCCCeeEEEec
Q 024021 110 GRALVPGCGTGY--DVVAMASPERYVVGLEISDIAIKKAEELSSSL------PNAKFVSFLKADFFTWCPTELFDLIFDY 181 (274)
Q Consensus 110 ~~vLDiG~G~G~--~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~------~~~~~~~~~~~d~~~~~~~~~~D~v~~~ 181 (274)
++|.=||+|.=. ++..+++.|.+|+.+|.+++.++..++..... .+..++.+. .|..+.. ...|+|+..
T Consensus 30 mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t-~d~~ea~--~~aDvVila 106 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAY-CDLKASL--EGVTDILIV 106 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEE-SCHHHHH--TTCCEEEEC
T ss_pred CeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEE-CCHHHHH--hcCCEEEEC
Confidence 578889886522 23445567889999999998888776653211 011122221 2221111 346888843
Q ss_pred ccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024021 182 TFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 182 ~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 213 (274)
++......+++.+...++++..++...
T Consensus 107 -----Vp~~~~~~vl~~i~~~l~~~~ivvs~~ 133 (356)
T 3k96_A 107 -----VPSFAFHEVITRMKPLIDAKTRIAWGT 133 (356)
T ss_dssp -----CCHHHHHHHHHHHGGGCCTTCEEEECC
T ss_pred -----CCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 455567788899999999887766543
No 455
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=84.11 E-value=4.5 Score=34.43 Aligned_cols=91 Identities=11% Similarity=0.017 Sum_probs=57.0
Q ss_pred CCCCeEEEEcCC--cchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc---ccCC---CCCCCCeeE
Q 024021 107 LPKGRALVPGCG--TGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA---DFFT---WCPTELFDL 177 (274)
Q Consensus 107 ~~~~~vLDiG~G--~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~---d~~~---~~~~~~~D~ 177 (274)
.++.+||=+|++ .|..+.++++ .|++|+++. +++..+.+++.-. ..++.. |+.+ ....+.+|+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa-------~~vi~~~~~~~~~~v~~~t~g~~d~ 234 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRGA-------EEVFDYRAPNLAQTIRTYTKNNLRY 234 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTC-------SEEEETTSTTHHHHHHHHTTTCCCE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHcCC-------cEEEECCCchHHHHHHHHccCCccE
Confidence 556899999983 6777777777 788998885 8888887765421 112221 1111 111235999
Q ss_pred EEecccccccChhHHHHHHHHHHhcc-cCCcEEEEEE
Q 024021 178 IFDYTFFCAIEPEMRAAWAQKIKDFL-KPDGELITLM 213 (274)
Q Consensus 178 v~~~~~~~~~~~~~~~~~l~~~~~~L-~pgG~~~~~~ 213 (274)
|+..-. . ...++...++| ++||+++...
T Consensus 235 v~d~~g-----~---~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 235 ALDCIT-----N---VESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp EEESSC-----S---HHHHHHHHHHSCTTCEEEEESS
T ss_pred EEECCC-----c---hHHHHHHHHHhhcCCCEEEEEe
Confidence 984322 1 13456677788 6999988754
No 456
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=83.98 E-value=16 Score=29.66 Aligned_cols=60 Identities=22% Similarity=0.238 Sum_probs=43.0
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024021 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 168 (274)
..++++|=.|++.|. .+..|++.|++|+.++.+++.++.....+...+ .++.++.+|+.+
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d 88 (283)
T 3v8b_A 26 QPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAG--GQAIALEADVSD 88 (283)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTT--CCEEEEECCTTC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCC
Confidence 446788888876653 234455589999999999988877776665443 468888888875
No 457
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=83.74 E-value=14 Score=32.63 Aligned_cols=95 Identities=19% Similarity=0.206 Sum_probs=58.6
Q ss_pred CeEEEEcCCc-c-hhHHHhhCCCCeEEEEeCChHHHHHHHHHhhc-------------CCC-CcceEEEEcccCCCCCCC
Q 024021 110 GRALVPGCGT-G-YDVVAMASPERYVVGLEISDIAIKKAEELSSS-------------LPN-AKFVSFLKADFFTWCPTE 173 (274)
Q Consensus 110 ~~vLDiG~G~-G-~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~-------------~~~-~~~~~~~~~d~~~~~~~~ 173 (274)
.+|.-||+|. | .++..++..|..|+++|.+++.++.++..... ... .....+ ..|. +. -.
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~-~~--~~ 113 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSST-KE--LS 113 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCG-GG--GT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCH-HH--HC
Confidence 5799999987 3 33455667899999999999988877653210 000 011222 3343 11 24
Q ss_pred CeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEE
Q 024021 174 LFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELIT 211 (274)
Q Consensus 174 ~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~ 211 (274)
..|+|+..-. . +.+....++.++...++|+.+++.
T Consensus 114 ~aDlVIeaVp-e--~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 114 TVDLVVEAVF-E--DMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp TCSEEEECCC-S--CHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCCEEEEcCC-C--CHHHHHHHHHHHHhhCCCCeEEEe
Confidence 5798885432 1 112346778888888988877654
No 458
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=83.57 E-value=8.7 Score=30.52 Aligned_cols=71 Identities=20% Similarity=0.096 Sum_probs=47.5
Q ss_pred CeEEEEcCCcchhHH----HhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-----------CCC
Q 024021 110 GRALVPGCGTGYDVV----AMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP-----------TEL 174 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~----~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-----------~~~ 174 (274)
+++|=.|++.| .+. .|++.|++|+.++.+++..+...+.+...+ .++.++.+|+.+... .++
T Consensus 3 k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 79 (256)
T 1geg_A 3 KVALVTGAGQG-IGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAG--GHAVAVKVDVSDRDQVFAAVEQARKTLGG 79 (256)
T ss_dssp CEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred CEEEEECCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 46777776544 443 445589999999999877766555544332 458889999987210 136
Q ss_pred eeEEEeccc
Q 024021 175 FDLIFDYTF 183 (274)
Q Consensus 175 ~D~v~~~~~ 183 (274)
+|+++.+..
T Consensus 80 id~lv~nAg 88 (256)
T 1geg_A 80 FDVIVNNAG 88 (256)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 899998754
No 459
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=83.46 E-value=4.9 Score=31.80 Aligned_cols=74 Identities=11% Similarity=0.052 Sum_probs=50.9
Q ss_pred CCCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-------CCCCCe
Q 024021 106 ALPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-------CPTELF 175 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-------~~~~~~ 175 (274)
..++++||=.|++.|. .+..|++.|++|+.++.+++.++...+... .++.+..+|+.+. ...++.
T Consensus 11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~i 85 (249)
T 3f9i_A 11 DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK-----DNYTIEVCNLANKEECSNLISKTSNL 85 (249)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-----SSEEEEECCTTSHHHHHHHHHTCSCC
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc-----cCccEEEcCCCCHHHHHHHHHhcCCC
Confidence 3456788888876552 234455589999999999887777665543 3588899998762 122468
Q ss_pred eEEEecccc
Q 024021 176 DLIFDYTFF 184 (274)
Q Consensus 176 D~v~~~~~~ 184 (274)
|+++.+...
T Consensus 86 d~li~~Ag~ 94 (249)
T 3f9i_A 86 DILVCNAGI 94 (249)
T ss_dssp SEEEECCC-
T ss_pred CEEEECCCC
Confidence 999987553
No 460
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=83.29 E-value=3.7 Score=27.97 Aligned_cols=64 Identities=16% Similarity=-0.001 Sum_probs=42.9
Q ss_pred CCeEEEEcCCcchhHHHhh----CCC-CeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC----CCCCeeEEE
Q 024021 109 KGRALVPGCGTGYDVVAMA----SPE-RYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC----PTELFDLIF 179 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~----~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~D~v~ 179 (274)
..+|+=+|+ |..+..++ +.| .+|+++|.+++..+... . ..+.+...|+.+.. .-..+|+|+
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~----~~~~~~~~d~~~~~~~~~~~~~~d~vi 74 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R----MGVATKQVDAKDEAGLAKALGGFDAVI 74 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T----TTCEEEECCTTCHHHHHHHTTTCSEEE
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h----CCCcEEEecCCCHHHHHHHHcCCCEEE
Confidence 357888988 65555443 377 79999999988776654 1 23677778876511 113689988
Q ss_pred ecc
Q 024021 180 DYT 182 (274)
Q Consensus 180 ~~~ 182 (274)
...
T Consensus 75 ~~~ 77 (118)
T 3ic5_A 75 SAA 77 (118)
T ss_dssp ECS
T ss_pred ECC
Confidence 654
No 461
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=83.26 E-value=4.4 Score=33.28 Aligned_cols=76 Identities=11% Similarity=0.034 Sum_probs=50.0
Q ss_pred CCCCeEEEEcCCcchhHH----HhhCCCCeEEEEeCChHHHHHHHHHhhcCCC-CcceEEEEcccCCCCC----------
Q 024021 107 LPKGRALVPGCGTGYDVV----AMASPERYVVGLEISDIAIKKAEELSSSLPN-AKFVSFLKADFFTWCP---------- 171 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~----~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~~~d~~~~~~---------- 171 (274)
..++++|=.|++.| .+. .|++.|++|+.++.+++.++.....+...+. ..++.++.+|+.+...
T Consensus 24 l~~k~vlVTGas~g-IG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 102 (297)
T 1xhl_A 24 FSGKSVIITGSSNG-IGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA 102 (297)
T ss_dssp CTTCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 44567777776544 444 4445899999999998877666555443321 1168899999987211
Q ss_pred -CCCeeEEEeccc
Q 024021 172 -TELFDLIFDYTF 183 (274)
Q Consensus 172 -~~~~D~v~~~~~ 183 (274)
.+++|+++.+..
T Consensus 103 ~~g~iD~lvnnAG 115 (297)
T 1xhl_A 103 KFGKIDILVNNAG 115 (297)
T ss_dssp HHSCCCEEEECCC
T ss_pred hcCCCCEEEECCC
Confidence 136899998754
No 462
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=83.21 E-value=16 Score=29.33 Aligned_cols=60 Identities=17% Similarity=0.183 Sum_probs=42.6
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeC-------------ChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024021 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEI-------------SDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~vD~-------------~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 168 (274)
..++++|=.|++.|. .+..|++.|++|+.+|. +++.++...+.....+ .++.++.+|+.+
T Consensus 13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~ 88 (280)
T 3pgx_A 13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQG--RKALTRVLDVRD 88 (280)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT--CCEEEEECCTTC
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC--CeEEEEEcCCCC
Confidence 456788888877653 23455568999999997 6677766666655543 468888888875
No 463
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=83.19 E-value=4.4 Score=33.39 Aligned_cols=76 Identities=14% Similarity=0.054 Sum_probs=54.7
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-----------C
Q 024021 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP-----------T 172 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-----------~ 172 (274)
..+++||=.|++.|. ++..|++.|++|+.++.+++.++.+.+.+...+ .++.++.+|+.+... .
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG--FDAHGVVCDVRHLDEMVRLADEAFRLL 106 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHhC
Confidence 456788888887652 234555589999999999988887777665543 468999999987211 1
Q ss_pred CCeeEEEecccc
Q 024021 173 ELFDLIFDYTFF 184 (274)
Q Consensus 173 ~~~D~v~~~~~~ 184 (274)
+..|+++.+..+
T Consensus 107 g~id~lvnnAg~ 118 (301)
T 3tjr_A 107 GGVDVVFSNAGI 118 (301)
T ss_dssp SSCSEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 368999987543
No 464
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=83.17 E-value=15 Score=28.71 Aligned_cols=70 Identities=17% Similarity=0.142 Sum_probs=45.8
Q ss_pred CCCCeEEEEcCCcchhHHH----hhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-------CCCCCe
Q 024021 107 LPKGRALVPGCGTGYDVVA----MASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-------CPTELF 175 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~----l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-------~~~~~~ 175 (274)
..++++|=.|++ |..+.. |++.|++|++++.++...+...+.. .+++++.+|+.+. ...+++
T Consensus 5 ~~~~~vlVTGas-ggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~i 77 (244)
T 1cyd_A 5 FSGLRALVTGAG-KGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC------PGIEPVCVDLGDWDATEKALGGIGPV 77 (244)
T ss_dssp CTTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHHTTCCCC
T ss_pred CCCCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc------cCCCcEEecCCCHHHHHHHHHHcCCC
Confidence 345778877764 444444 4458999999999887665544332 2366778898762 112468
Q ss_pred eEEEeccc
Q 024021 176 DLIFDYTF 183 (274)
Q Consensus 176 D~v~~~~~ 183 (274)
|+++.+..
T Consensus 78 d~vi~~Ag 85 (244)
T 1cyd_A 78 DLLVNNAA 85 (244)
T ss_dssp SEEEECCC
T ss_pred CEEEECCc
Confidence 99998754
No 465
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=83.07 E-value=4.1 Score=33.85 Aligned_cols=90 Identities=14% Similarity=0.134 Sum_probs=54.6
Q ss_pred CCCCCeEEEEc--CCcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-C-CCCCCeeEEEe
Q 024021 106 ALPKGRALVPG--CGTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-W-CPTELFDLIFD 180 (274)
Q Consensus 106 ~~~~~~vLDiG--~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~-~~~~~~D~v~~ 180 (274)
..++.+||=.| .|.|..+..+++ .|++|++++ +++..+.+++.-. + ..+..+-.+ . ..-..+|+|+.
T Consensus 150 ~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~lGa-----~--~~i~~~~~~~~~~~~~g~D~v~d 221 (321)
T 3tqh_A 150 VKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKALGA-----E--QCINYHEEDFLLAISTPVDAVID 221 (321)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHHHTC-----S--EEEETTTSCHHHHCCSCEEEEEE
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHHHcCC-----C--EEEeCCCcchhhhhccCCCEEEE
Confidence 34568999886 345666777766 788999987 5555777765421 1 122211111 0 01146999984
Q ss_pred cccccccChhHHHHHHHHHHhcccCCcEEEEE
Q 024021 181 YTFFCAIEPEMRAAWAQKIKDFLKPDGELITL 212 (274)
Q Consensus 181 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~ 212 (274)
.- ..+ .+....++|+++|.++..
T Consensus 222 ~~-----g~~----~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 222 LV-----GGD----VGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp SS-----CHH----HHHHHGGGEEEEEEEEEC
T ss_pred CC-----CcH----HHHHHHHhccCCCEEEEe
Confidence 32 211 237788999999998875
No 466
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=82.95 E-value=7 Score=32.50 Aligned_cols=98 Identities=13% Similarity=0.046 Sum_probs=56.6
Q ss_pred CCCCeEEEEcCCcchh--HHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEE-----EcccCCCCCCCCeeEEE
Q 024021 107 LPKGRALVPGCGTGYD--VVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFL-----KADFFTWCPTELFDLIF 179 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~--~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~-----~~d~~~~~~~~~~D~v~ 179 (274)
....+|.=+|+|.=.. +..|++.|..|+.+ .+++.++..++.-..... ....+. ..|. .....+|+|+
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~~-~~~~~~~~~~~~~~~---~~~~~~D~vi 91 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLET-QSFDEQVKVSASSDP---SAVQGADLVL 91 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEEC-SSCEEEECCEEESCG---GGGTTCSEEE
T ss_pred ccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEEc-CCCcEEEeeeeeCCH---HHcCCCCEEE
Confidence 4457899998875332 33445578899999 888888777654211000 111110 1111 1124689888
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCcEEEEEEc
Q 024021 180 DYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 180 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 214 (274)
..- +......+++.+...++++..++....
T Consensus 92 lav-----k~~~~~~~l~~l~~~l~~~~~iv~~~n 121 (318)
T 3hwr_A 92 FCV-----KSTDTQSAALAMKPALAKSALVLSLQN 121 (318)
T ss_dssp ECC-----CGGGHHHHHHHHTTTSCTTCEEEEECS
T ss_pred EEc-----ccccHHHHHHHHHHhcCCCCEEEEeCC
Confidence 532 333446788889999998887766543
No 467
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=82.60 E-value=16 Score=29.44 Aligned_cols=74 Identities=18% Similarity=0.140 Sum_probs=46.3
Q ss_pred CCCCeEEEEcCC----cch-hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC-----------
Q 024021 107 LPKGRALVPGCG----TGY-DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC----------- 170 (274)
Q Consensus 107 ~~~~~vLDiG~G----~G~-~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~----------- 170 (274)
..++++|=.|++ .|. .+..+++.|++|+.++.++ ..+..++..... .++.++.+|+.+..
T Consensus 24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~l~~~~---~~~~~~~~Dl~~~~~v~~~~~~~~~ 99 (280)
T 3nrc_A 24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ-FKDRVEKLCAEF---NPAAVLPCDVISDQEIKDLFVELGK 99 (280)
T ss_dssp TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT-CHHHHHHHHGGG---CCSEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch-HHHHHHHHHHhc---CCceEEEeecCCHHHHHHHHHHHHH
Confidence 456788888844 332 3455666899999999987 122222222222 34889999998721
Q ss_pred CCCCeeEEEecccc
Q 024021 171 PTELFDLIFDYTFF 184 (274)
Q Consensus 171 ~~~~~D~v~~~~~~ 184 (274)
..++.|+++.+..+
T Consensus 100 ~~g~id~li~nAg~ 113 (280)
T 3nrc_A 100 VWDGLDAIVHSIAF 113 (280)
T ss_dssp HCSSCCEEEECCCC
T ss_pred HcCCCCEEEECCcc
Confidence 12468999987654
No 468
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=82.59 E-value=4.1 Score=34.73 Aligned_cols=92 Identities=16% Similarity=0.048 Sum_probs=54.9
Q ss_pred CCCCeEEEEc--CCcchhHHHhhC-CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEc---ccCC-CCCCCCeeEEE
Q 024021 107 LPKGRALVPG--CGTGYDVVAMAS-PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKA---DFFT-WCPTELFDLIF 179 (274)
Q Consensus 107 ~~~~~vLDiG--~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~---d~~~-~~~~~~~D~v~ 179 (274)
.++.+||=.| .|.|..+..+++ .|++|++++ +++..+.+++. +. + ..+.. |+.+ ......+|+|+
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~l----Ga-~--~v~~~~~~~~~~~~~~~~g~D~vi 253 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRKL----GA-D--DVIDYKSGSVEEQLKSLKPFDFIL 253 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHT----TC-S--EEEETTSSCHHHHHHTSCCBSEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHHc----CC-C--EEEECCchHHHHHHhhcCCCCEEE
Confidence 3567999998 345666666666 788999998 67767766543 21 1 11211 1111 11124699998
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCcEEEEEE
Q 024021 180 DYTFFCAIEPEMRAAWAQKIKDFLKPDGELITLM 213 (274)
Q Consensus 180 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~ 213 (274)
..-.-. ...+....++++++|.++...
T Consensus 254 d~~g~~-------~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 254 DNVGGS-------TETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp ESSCTT-------HHHHGGGGBCSSSCCEEEESC
T ss_pred ECCCCh-------hhhhHHHHHhhcCCcEEEEeC
Confidence 543211 023466778899999988753
No 469
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=82.58 E-value=5.8 Score=31.25 Aligned_cols=71 Identities=17% Similarity=0.151 Sum_probs=47.0
Q ss_pred CeEEEEcCCcchhHHH----hhCCCCeEEEEeCChHHHHHHHHHh-hcCCCCcceEEEEcccCCCCC-----------CC
Q 024021 110 GRALVPGCGTGYDVVA----MASPERYVVGLEISDIAIKKAEELS-SSLPNAKFVSFLKADFFTWCP-----------TE 173 (274)
Q Consensus 110 ~~vLDiG~G~G~~~~~----l~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~~~~~~~d~~~~~~-----------~~ 173 (274)
+++|=.|++ |..+.. |++.|++|+.++.++...+...... ... ..++.++.+|+.+... .+
T Consensus 3 k~vlItGas-ggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (250)
T 2cfc_A 3 RVAIVTGAS-SGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAY--ADKVLRVRADVADEGDVNAAIAATMEQFG 79 (250)
T ss_dssp CEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTT--GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 467777755 444444 4458999999999987776655544 222 2468999999987211 13
Q ss_pred CeeEEEeccc
Q 024021 174 LFDLIFDYTF 183 (274)
Q Consensus 174 ~~D~v~~~~~ 183 (274)
.+|+++.+..
T Consensus 80 ~id~li~~Ag 89 (250)
T 2cfc_A 80 AIDVLVNNAG 89 (250)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 6899998754
No 470
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=82.55 E-value=16 Score=29.59 Aligned_cols=60 Identities=18% Similarity=0.094 Sum_probs=42.7
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024021 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 168 (274)
..++++|=.|++.|. .+..|++.|++|+.++.+++.++.....+...+ .++.++.+|+.+
T Consensus 6 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~ 68 (280)
T 3tox_A 6 LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGG--GEAAALAGDVGD 68 (280)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTT--CCEEECCCCTTC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCCCC
Confidence 446778888876552 234555689999999999988877766664433 467888888865
No 471
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=82.10 E-value=13 Score=29.95 Aligned_cols=75 Identities=15% Similarity=0.061 Sum_probs=45.4
Q ss_pred CCCCeEEEEcCCc-chhHH----HhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC----------
Q 024021 107 LPKGRALVPGCGT-GYDVV----AMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP---------- 171 (274)
Q Consensus 107 ~~~~~vLDiG~G~-G~~~~----~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~---------- 171 (274)
..++++|=.|++. |..+. .|++.|++|+.++.++...+.+.+..... +++.++.+|+.+...
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~v~~~~~~~~~ 95 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGF---GSDLVVKCDVSLDEDIKNLKKFLEE 95 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHT---TCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEEcCCCCHHHHHHHHHHHHH
Confidence 3467888888752 44444 44458999999998875222222222212 236788899886210
Q ss_pred -CCCeeEEEecccc
Q 024021 172 -TELFDLIFDYTFF 184 (274)
Q Consensus 172 -~~~~D~v~~~~~~ 184 (274)
.++.|+++.+..+
T Consensus 96 ~~g~iD~lv~~Ag~ 109 (285)
T 2p91_A 96 NWGSLDIIVHSIAY 109 (285)
T ss_dssp HTSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCC
Confidence 1468999987543
No 472
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=82.01 E-value=19 Score=29.31 Aligned_cols=60 Identities=10% Similarity=0.199 Sum_probs=41.7
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCC------------hHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024021 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEIS------------DIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~vD~~------------~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 168 (274)
..++++|=.|++.|. .+..|++.|++|+.+|.+ ++.++.....+...+ .++.++.+|+.+
T Consensus 26 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~ 100 (299)
T 3t7c_A 26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG--RRIIASQVDVRD 100 (299)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcC--CceEEEECCCCC
Confidence 456788888887663 234555689999999987 566665555544443 468888998875
No 473
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=81.93 E-value=20 Score=29.51 Aligned_cols=60 Identities=18% Similarity=0.244 Sum_probs=40.2
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCC------------hHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024021 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEIS------------DIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~vD~~------------~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 168 (274)
..++++|=.|++.|. .+..|++.|++|+.+|.+ ++.++.........+ .++.++.+|+.+
T Consensus 44 l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d 118 (317)
T 3oec_A 44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQG--RRIIARQADVRD 118 (317)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTC
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcC--CeEEEEECCCCC
Confidence 446778888876653 234555689999999886 555555554444433 468888999875
No 474
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=81.88 E-value=5.4 Score=32.85 Aligned_cols=112 Identities=9% Similarity=0.059 Sum_probs=64.1
Q ss_pred CeEEEEcCCcch--hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccccccc
Q 024021 110 GRALVPGCGTGY--DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFCAI 187 (274)
Q Consensus 110 ~~vLDiG~G~G~--~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~~ 187 (274)
++|.=||+|.=. ++..+++.|.+|+++|.+++.++.+.+. + ......+..+.. ...|+|+.. +
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~----g----~~~~~~~~~e~~--~~aDvvi~~-----v 72 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAE----G----ACGAAASAREFA--GVVDALVIL-----V 72 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT----T----CSEEESSSTTTT--TTCSEEEEC-----C
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc----C----CccccCCHHHHH--hcCCEEEEE-----C
Confidence 578888776421 2234445889999999999887776543 1 111233333322 346988853 2
Q ss_pred Ch-hHHHHHH---HHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEE
Q 024021 188 EP-EMRAAWA---QKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAIS 245 (274)
Q Consensus 188 ~~-~~~~~~l---~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 245 (274)
+. .....++ +.+...+++|..++-.. +. ...+..++.+.+++.|...+.
T Consensus 73 p~~~~~~~v~~~~~~l~~~l~~g~ivv~~s-t~--------~~~~~~~~~~~~~~~g~~~~~ 125 (303)
T 3g0o_A 73 VNAAQVRQVLFGEDGVAHLMKPGSAVMVSS-TI--------SSADAQEIAAALTALNLNMLD 125 (303)
T ss_dssp SSHHHHHHHHC--CCCGGGSCTTCEEEECS-CC--------CHHHHHHHHHHHHTTTCEEEE
T ss_pred CCHHHHHHHHhChhhHHhhCCCCCEEEecC-CC--------CHHHHHHHHHHHHHcCCeEEe
Confidence 32 2344454 56667788877654322 11 011345666777777766554
No 475
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=81.86 E-value=12 Score=30.00 Aligned_cols=104 Identities=12% Similarity=0.103 Sum_probs=59.4
Q ss_pred CCCeEEEEcCC-cchhH----HHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC-----------C
Q 024021 108 PKGRALVPGCG-TGYDV----VAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC-----------P 171 (274)
Q Consensus 108 ~~~~vLDiG~G-~G~~~----~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-----------~ 171 (274)
.++++|=.|++ +|..+ ..|++.|++|+.++.+++..+..++..... .++.++.+|+.+.. .
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQEL---NSPYVYELDVSKEEHFKSLYNSVKKD 81 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHT---TCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45788888875 24444 345558999999998875212222221112 23678889988621 0
Q ss_pred CCCeeEEEeccccc----------ccChhHHH-----------HHHHHHHhcccCCcEEEEEEc
Q 024021 172 TELFDLIFDYTFFC----------AIEPEMRA-----------AWAQKIKDFLKPDGELITLMF 214 (274)
Q Consensus 172 ~~~~D~v~~~~~~~----------~~~~~~~~-----------~~l~~~~~~L~pgG~~~~~~~ 214 (274)
.++.|+++.+..+. ..+.+.+. .+++.+...++++|.++.+.-
T Consensus 82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 145 (275)
T 2pd4_A 82 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSY 145 (275)
T ss_dssp TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred cCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEec
Confidence 14689999875432 22223222 233455566665777776553
No 476
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=81.81 E-value=16 Score=29.42 Aligned_cols=60 Identities=15% Similarity=0.073 Sum_probs=40.7
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024021 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 168 (274)
..++++|=.|++.|. .+..|++.|++|+.++.+++..+.....+...+ .++.++.+|+.+
T Consensus 26 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d 88 (270)
T 3ftp_A 26 LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAG--LEGRGAVLNVND 88 (270)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHT--CCCEEEECCTTC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEEeCCC
Confidence 345677777765542 234455589999999999887777666554433 357788888765
No 477
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=81.60 E-value=18 Score=28.71 Aligned_cols=61 Identities=18% Similarity=0.115 Sum_probs=44.2
Q ss_pred CCCCeEEEEcC-Ccch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024021 107 LPKGRALVPGC-GTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 107 ~~~~~vLDiG~-G~G~---~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 168 (274)
..++++|=.|+ |.|. .+..+++.|++|+.++.+++..+.....+...+ ..++.++.+|+.+
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~ 84 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLG-LGRVEAVVCDVTS 84 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC-SSCEEEEECCTTC
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC-CCceEEEEeCCCC
Confidence 44678888887 5543 345666689999999999988877776664432 2468899999875
No 478
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=81.27 E-value=6.5 Score=32.01 Aligned_cols=73 Identities=12% Similarity=0.079 Sum_probs=50.1
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC-------CCCCee
Q 024021 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC-------PTELFD 176 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-------~~~~~D 176 (274)
..++++|=.|++.|. .+..|++.|++|+.++.++...+.+.+.. ..++.++.+|+.+.. .-++.|
T Consensus 14 l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~v~~~~~~~~~iD 88 (291)
T 3rd5_A 14 FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-----AGQVEVRELDLQDLSSVRRFADGVSGAD 88 (291)
T ss_dssp CTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS-----SSEEEEEECCTTCHHHHHHHHHTCCCEE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----cCCeeEEEcCCCCHHHHHHHHHhcCCCC
Confidence 456788888876542 23344558999999999988766655443 257999999998721 114789
Q ss_pred EEEecccc
Q 024021 177 LIFDYTFF 184 (274)
Q Consensus 177 ~v~~~~~~ 184 (274)
+++.+..+
T Consensus 89 ~lv~nAg~ 96 (291)
T 3rd5_A 89 VLINNAGI 96 (291)
T ss_dssp EEEECCCC
T ss_pred EEEECCcC
Confidence 99987543
No 479
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=81.25 E-value=12 Score=30.44 Aligned_cols=85 Identities=13% Similarity=0.211 Sum_probs=53.2
Q ss_pred CeEEEEcC-Cc-ch-hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccccc
Q 024021 110 GRALVPGC-GT-GY-DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFCA 186 (274)
Q Consensus 110 ~~vLDiG~-G~-G~-~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~ 186 (274)
.+|.=||+ |. |. ++..+++.|.+|+++|.+++.++.+.+ .+ +.. .+..+.. ...|+|+..
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~----~g----~~~--~~~~~~~--~~aDvVi~a----- 74 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG----MG----IPL--TDGDGWI--DEADVVVLA----- 74 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH----TT----CCC--CCSSGGG--GTCSEEEEC-----
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh----cC----CCc--CCHHHHh--cCCCEEEEc-----
Confidence 47888988 64 22 233445578899999999987776654 12 111 1222211 357988843
Q ss_pred cChhHHHHHHHHHHhcccCCcEEEE
Q 024021 187 IEPEMRAAWAQKIKDFLKPDGELIT 211 (274)
Q Consensus 187 ~~~~~~~~~l~~~~~~L~pgG~~~~ 211 (274)
+++.....+++.+...+++|..++-
T Consensus 75 v~~~~~~~v~~~l~~~l~~~~ivv~ 99 (286)
T 3c24_A 75 LPDNIIEKVAEDIVPRVRPGTIVLI 99 (286)
T ss_dssp SCHHHHHHHHHHHGGGSCTTCEEEE
T ss_pred CCchHHHHHHHHHHHhCCCCCEEEE
Confidence 3445567788888888888765543
No 480
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=81.24 E-value=19 Score=28.83 Aligned_cols=60 Identities=18% Similarity=0.221 Sum_probs=41.3
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeC-------------ChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024021 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEI-------------SDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~vD~-------------~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 168 (274)
..++++|=.|++.|. .+..|++.|++|+.+|. +++.++...+.....+ .++.++.+|+.+
T Consensus 9 l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~ 84 (277)
T 3tsc_A 9 LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN--RRIVAAVVDTRD 84 (277)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTC
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC--CeEEEEECCCCC
Confidence 456788888877653 23455568999999998 5666666555544433 468888888875
No 481
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=81.19 E-value=8 Score=31.30 Aligned_cols=109 Identities=13% Similarity=0.011 Sum_probs=62.6
Q ss_pred eEEEEcCCc-ch-hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEecccccccC
Q 024021 111 RALVPGCGT-GY-DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFCAIE 188 (274)
Q Consensus 111 ~vLDiG~G~-G~-~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~~~ 188 (274)
+|.=+|+|. |. ++..+++ |.+|+.+|.+++..+...+.- +... +..+.. ...|+|+..-. +
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g--------~~~~--~~~~~~--~~~D~vi~~v~----~ 65 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEF--------GSEA--VPLERV--AEARVIFTCLP----T 65 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHH--------CCEE--CCGGGG--GGCSEEEECCS----S
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCC--------Cccc--CHHHHH--hCCCEEEEeCC----C
Confidence 577788875 32 3345667 889999999988777665431 1111 111111 35798885322 1
Q ss_pred hhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHhcCCCcEEE
Q 024021 189 PEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQPMGFQAIS 245 (274)
Q Consensus 189 ~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 245 (274)
+.....+++.+...+++|..++... .. ...+.+++.+.+...|...+.
T Consensus 66 ~~~~~~v~~~l~~~l~~~~~vv~~s-~~--------~~~~~~~l~~~~~~~g~~~~~ 113 (289)
T 2cvz_A 66 TREVYEVAEALYPYLREGTYWVDAT-SG--------EPEASRRLAERLREKGVTYLD 113 (289)
T ss_dssp HHHHHHHHHHHTTTCCTTEEEEECS-CC--------CHHHHHHHHHHHHTTTEEEEE
T ss_pred hHHHHHHHHHHHhhCCCCCEEEECC-CC--------CHHHHHHHHHHHHHcCCEEEE
Confidence 2234567778888888877655432 11 011345677777776755543
No 482
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=81.11 E-value=12 Score=31.14 Aligned_cols=96 Identities=16% Similarity=0.051 Sum_probs=58.1
Q ss_pred CeEEEEcCCc--chhHHHhhCCCCeEEEEeCChHHHHHHHHHhh-------cCCCC----------cceEEEEcccCCCC
Q 024021 110 GRALVPGCGT--GYDVVAMASPERYVVGLEISDIAIKKAEELSS-------SLPNA----------KFVSFLKADFFTWC 170 (274)
Q Consensus 110 ~~vLDiG~G~--G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~-------~~~~~----------~~~~~~~~d~~~~~ 170 (274)
.+|-=||+|. +.++..+++.|.+|+++|.+++.++.+.+... ..+.. .++++. .|..+.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~-~~~~ea- 84 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNLAEA- 84 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCHHHH-
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEe-CCHHHH-
Confidence 5688888875 23344556689999999999999988865421 11110 123332 222211
Q ss_pred CCCCeeEEEecccccccChhHHHHHHHHHHhcccCCcEEEE
Q 024021 171 PTELFDLIFDYTFFCAIEPEMRAAWAQKIKDFLKPDGELIT 211 (274)
Q Consensus 171 ~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~ 211 (274)
-...|+|+..-. . +.+....++.++...++|+.+++.
T Consensus 85 -v~~aDlVieavp-e--~~~~k~~v~~~l~~~~~~~~Ii~s 121 (319)
T 2dpo_A 85 -VEGVVHIQECVP-E--NLDLKRKIFAQLDSIVDDRVVLSS 121 (319)
T ss_dssp -TTTEEEEEECCC-S--CHHHHHHHHHHHHTTCCSSSEEEE
T ss_pred -HhcCCEEEEecc-C--CHHHHHHHHHHHHhhCCCCeEEEE
Confidence 145798885322 1 113446788899999998886654
No 483
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=81.11 E-value=4.2 Score=32.52 Aligned_cols=77 Identities=12% Similarity=-0.008 Sum_probs=53.7
Q ss_pred CCCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-----------
Q 024021 106 ALPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP----------- 171 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~----------- 171 (274)
...++++|=.|++.|. .+..|++.|++|+.++.+++..+.....+...+ .++.++.+|+.+...
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 86 (256)
T 3gaf_A 9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAG--GKAIGLECNVTDEQHREAVIKAALDQ 86 (256)
T ss_dssp CCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 3456788888776653 234455589999999999988777766665543 568999999987211
Q ss_pred CCCeeEEEecccc
Q 024021 172 TELFDLIFDYTFF 184 (274)
Q Consensus 172 ~~~~D~v~~~~~~ 184 (274)
.++.|+++.+...
T Consensus 87 ~g~id~lv~nAg~ 99 (256)
T 3gaf_A 87 FGKITVLVNNAGG 99 (256)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 1368999987543
No 484
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=81.08 E-value=11 Score=30.25 Aligned_cols=89 Identities=10% Similarity=0.066 Sum_probs=54.2
Q ss_pred CCeEEEEcCCc-chh-HHHhhCCCCe-EEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCCCCCeeEEEeccccc
Q 024021 109 KGRALVPGCGT-GYD-VVAMASPERY-VVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCPTELFDLIFDYTFFC 185 (274)
Q Consensus 109 ~~~vLDiG~G~-G~~-~~~l~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~ 185 (274)
..+|.=+|||. |.. +..+++.|.+ |+.+|.+++.++.+.+.. + +.. ..|..+.. ...|+|+..
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~---g----~~~-~~~~~~~~--~~~Dvvi~a---- 75 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKV---E----AEY-TTDLAEVN--PYAKLYIVS---- 75 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHT---T----CEE-ESCGGGSC--SCCSEEEEC----
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHc---C----Cce-eCCHHHHh--cCCCEEEEe----
Confidence 35788898863 222 2333446777 899999998877766543 1 222 22333222 357988853
Q ss_pred ccChhHHHHHHHHHHhcccCCcEEEEE
Q 024021 186 AIEPEMRAAWAQKIKDFLKPDGELITL 212 (274)
Q Consensus 186 ~~~~~~~~~~l~~~~~~L~pgG~~~~~ 212 (274)
.++.....+++.+...+++|..++..
T Consensus 76 -v~~~~~~~v~~~l~~~~~~~~ivv~~ 101 (266)
T 3d1l_A 76 -LKDSAFAELLQGIVEGKREEALMVHT 101 (266)
T ss_dssp -CCHHHHHHHHHHHHTTCCTTCEEEEC
T ss_pred -cCHHHHHHHHHHHHhhcCCCcEEEEC
Confidence 34444567778888888887765543
No 485
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=81.06 E-value=5 Score=32.15 Aligned_cols=75 Identities=15% Similarity=-0.001 Sum_probs=53.0
Q ss_pred CCCCeEEEEcCCcchhHH----HhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-----------
Q 024021 107 LPKGRALVPGCGTGYDVV----AMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP----------- 171 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~----~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~----------- 171 (274)
..+++||=.|++.| ++. .|++.|++|+.++.+++.++.....+...+ .++.++.+|+.+...
T Consensus 27 l~~k~vlITGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~ 103 (262)
T 3rkr_A 27 LSGQVAVVTGASRG-IGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG--GEAESHACDLSHSDAIAAFATGVLAA 103 (262)
T ss_dssp TTTCEEEESSTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC--CceeEEEecCCCHHHHHHHHHHHHHh
Confidence 44678888876554 443 444589999999999988877776665543 468999999987211
Q ss_pred CCCeeEEEecccc
Q 024021 172 TELFDLIFDYTFF 184 (274)
Q Consensus 172 ~~~~D~v~~~~~~ 184 (274)
.++.|+++.+...
T Consensus 104 ~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 104 HGRCDVLVNNAGV 116 (262)
T ss_dssp HSCCSEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 1468999987554
No 486
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=81.00 E-value=8.6 Score=29.56 Aligned_cols=93 Identities=14% Similarity=0.081 Sum_probs=55.6
Q ss_pred eEEEEcCCcchhHHHhh----CCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC--CCCeeEEEecccc
Q 024021 111 RALVPGCGTGYDVVAMA----SPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP--TELFDLIFDYTFF 184 (274)
Q Consensus 111 ~vLDiG~G~G~~~~~l~----~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~D~v~~~~~~ 184 (274)
+||=.|+ +|..+..++ +.|.+|++++.++...... . ..+++++.+|+.+... -..+|+|+.....
T Consensus 2 kilVtGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~-----~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 72 (224)
T 3h2s_A 2 KIAVLGA-TGRAGSAIVAEARRRGHEVLAVVRDPQKAADR---L-----GATVATLVKEPLVLTEADLDSVDAVVDALSV 72 (224)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---T-----CTTSEEEECCGGGCCHHHHTTCSEEEECCCC
T ss_pred EEEEEcC-CCHHHHHHHHHHHHCCCEEEEEEecccccccc---c-----CCCceEEecccccccHhhcccCCEEEECCcc
Confidence 5666664 566665544 4789999999988754422 1 1358999999987422 2368999977654
Q ss_pred ccc--ChhHHHHHHHHHHhcccC-CcEEEEE
Q 024021 185 CAI--EPEMRAAWAQKIKDFLKP-DGELITL 212 (274)
Q Consensus 185 ~~~--~~~~~~~~l~~~~~~L~p-gG~~~~~ 212 (274)
.+- ...........+.+.++. |+.+++.
T Consensus 73 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~ 103 (224)
T 3h2s_A 73 PWGSGRGYLHLDFATHLVSLLRNSDTLAVFI 103 (224)
T ss_dssp CTTSSCTHHHHHHHHHHHHTCTTCCCEEEEE
T ss_pred CCCcchhhHHHHHHHHHHHHHHHcCCcEEEE
Confidence 311 112223344566666654 4555554
No 487
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=80.59 E-value=5 Score=35.49 Aligned_cols=90 Identities=9% Similarity=0.015 Sum_probs=58.5
Q ss_pred CCeEEEEcCCcchhHHHhh----CCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC-----CCCCCeeEEE
Q 024021 109 KGRALVPGCGTGYDVVAMA----SPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW-----CPTELFDLIF 179 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~----~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~D~v~ 179 (274)
.++|+=+|||. .+..++ ..|..|+.+|.+++.++.+...+ .+..+.||..++ ..-+..|+++
T Consensus 3 ~M~iiI~G~G~--vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-------~~~~i~Gd~~~~~~L~~Agi~~ad~~i 73 (461)
T 4g65_A 3 AMKIIILGAGQ--VGGTLAENLVGENNDITIVDKDGDRLRELQDKY-------DLRVVNGHASHPDVLHEAGAQDADMLV 73 (461)
T ss_dssp CEEEEEECCSH--HHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-------SCEEEESCTTCHHHHHHHTTTTCSEEE
T ss_pred cCEEEEECCCH--HHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-------CcEEEEEcCCCHHHHHhcCCCcCCEEE
Confidence 35777777764 544444 46889999999999998887665 367889999872 2235689888
Q ss_pred ecccccccChhHHHHHHHHHHhcccCCcEEEEE
Q 024021 180 DYTFFCAIEPEMRAAWAQKIKDFLKPDGELITL 212 (274)
Q Consensus 180 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~ 212 (274)
+.- +.+....+...+.+.+.+.-..+..
T Consensus 74 a~t-----~~De~Nl~~~~~Ak~~~~~~~~iar 101 (461)
T 4g65_A 74 AVT-----NTDETNMAACQVAFTLFNTPNRIAR 101 (461)
T ss_dssp ECC-----SCHHHHHHHHHHHHHHHCCSSEEEE
T ss_pred EEc-----CChHHHHHHHHHHHHhcCCccceeE
Confidence 521 2233344555666666555444443
No 488
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=80.26 E-value=5.9 Score=31.67 Aligned_cols=75 Identities=20% Similarity=0.076 Sum_probs=45.7
Q ss_pred CCCCeEEEEcCC-cchhHHH----hhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC----------
Q 024021 107 LPKGRALVPGCG-TGYDVVA----MASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP---------- 171 (274)
Q Consensus 107 ~~~~~vLDiG~G-~G~~~~~----l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~---------- 171 (274)
..++++|=.|++ +|..+.. |++.|++|+.++.++...+...+..... ..+.++.+|+.+...
T Consensus 6 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (261)
T 2wyu_A 6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEAL---GGALLFRADVTQDEELDALFAGVKE 82 (261)
T ss_dssp CTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHT---TCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc---CCcEEEECCCCCHHHHHHHHHHHHH
Confidence 345788888875 2445444 4447999999998875222222222212 237888999987211
Q ss_pred -CCCeeEEEecccc
Q 024021 172 -TELFDLIFDYTFF 184 (274)
Q Consensus 172 -~~~~D~v~~~~~~ 184 (274)
.++.|+++.+...
T Consensus 83 ~~g~iD~lv~~Ag~ 96 (261)
T 2wyu_A 83 AFGGLDYLVHAIAF 96 (261)
T ss_dssp HHSSEEEEEECCCC
T ss_pred HcCCCCEEEECCCC
Confidence 1368999987543
No 489
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=80.20 E-value=12 Score=29.04 Aligned_cols=68 Identities=7% Similarity=-0.008 Sum_probs=45.9
Q ss_pred eEEEEcCCcchhH----HHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCC--------CCCCCeeEE
Q 024021 111 RALVPGCGTGYDV----VAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTW--------CPTELFDLI 178 (274)
Q Consensus 111 ~vLDiG~G~G~~~----~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--------~~~~~~D~v 178 (274)
++|=.|++.| .+ ..|++.|++|+.++.+++.++...... ..++.++.+|+.+. .....+|++
T Consensus 3 ~vlVTGas~g-IG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~l 76 (230)
T 3guy_A 3 LIVITGASSG-LGAELAKLYDAEGKATYLTGRSESKLSTVTNCL-----SNNVGYRARDLASHQEVEQLFEQLDSIPSTV 76 (230)
T ss_dssp CEEEESTTSH-HHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC-----SSCCCEEECCTTCHHHHHHHHHSCSSCCSEE
T ss_pred EEEEecCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-----hhccCeEeecCCCHHHHHHHHHHHhhcCCEE
Confidence 4666776544 43 344558999999999988777665544 24688899999872 112346999
Q ss_pred Eecccc
Q 024021 179 FDYTFF 184 (274)
Q Consensus 179 ~~~~~~ 184 (274)
+.+...
T Consensus 77 v~~Ag~ 82 (230)
T 3guy_A 77 VHSAGS 82 (230)
T ss_dssp EECCCC
T ss_pred EEeCCc
Confidence 876543
No 490
>1ej6_A Lambda2; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_U
Probab=80.18 E-value=2.7 Score=40.74 Aligned_cols=96 Identities=17% Similarity=0.132 Sum_probs=67.7
Q ss_pred CCCCCeEEEEcCCcchhHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC--CCCCCCeeEEEeccc
Q 024021 106 ALPKGRALVPGCGTGYDVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT--WCPTELFDLIFDYTF 183 (274)
Q Consensus 106 ~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~D~v~~~~~ 183 (274)
...+.++||+|+|.=.=...|..+...|+.+|.-|-+ .....+....+|++.|+.. .....++|.|.|...
T Consensus 819 ~~~~~~~lDlGTGPE~RiLsLiP~~~pvtm~D~RP~a-------e~~~~w~~~T~f~~~DyL~~~~~~~~~~D~vt~i~S 891 (1289)
T 1ej6_A 819 VYDGDVVLDLGTGPEAKILELIPATSPVTCVDIRPTA-------QPSGCWNVRTTFLELDYLSDGWITGVRGDIVTCMLS 891 (1289)
T ss_dssp CCTTCCEEEESCCSSCGGGGTSCTTSCEEEEESSCCC-------SCSTTBSSCEEEEESCTTSSSCGGGCCCSEEEECSC
T ss_pred ecccceEEEccCCCcceeeeecCCCCceEEecccCch-------hhhccccccceeeEccccccceeecCCCcEEEEEee
Confidence 4556899999998877777777788899999997742 1112234568999999987 333457999999888
Q ss_pred ccccCh---hHHHHHHHHHHhcccCCcE
Q 024021 184 FCAIEP---EMRAAWAQKIKDFLKPDGE 208 (274)
Q Consensus 184 ~~~~~~---~~~~~~l~~~~~~L~pgG~ 208 (274)
++..-. -.+...++++.+.+++.|.
T Consensus 892 LGAA~A~a~~tl~~~~~q~l~~~~~~~~ 919 (1289)
T 1ej6_A 892 LGAAAAGKSMTFDAAFQQLIKVLSKSTA 919 (1289)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHTSCC
T ss_pred chhhhhccCCcHHHHHHHHHHHHHhcCc
Confidence 765311 1245677777777777663
No 491
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=79.91 E-value=21 Score=29.08 Aligned_cols=61 Identities=20% Similarity=0.080 Sum_probs=42.2
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024021 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 168 (274)
..++++|=.|++.|. .+..|++.|++|+.++.+++.++...+.+...+ ..++.++.+|+.+
T Consensus 39 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d 102 (293)
T 3rih_A 39 LSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELG-AGNVIGVRLDVSD 102 (293)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSS-SSCEEEEECCTTC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhC-CCcEEEEEEeCCC
Confidence 456778877776552 234555589999999999887777666654432 1368888888865
No 492
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=79.77 E-value=15 Score=28.10 Aligned_cols=125 Identities=10% Similarity=-0.057 Sum_probs=67.4
Q ss_pred eEEEEcCCcchhHHHhh----CCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC-C----CCCCCeeEEEec
Q 024021 111 RALVPGCGTGYDVVAMA----SPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT-W----CPTELFDLIFDY 181 (274)
Q Consensus 111 ~vLDiG~G~G~~~~~l~----~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~----~~~~~~D~v~~~ 181 (274)
+||=.| |+|..+..++ +.|.+|++++.++... ... .+++++.+|+.+ . ..-..+|+|+..
T Consensus 2 ~ilItG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~-------~~~---~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ 70 (219)
T 3dqp_A 2 KIFIVG-STGRVGKSLLKSLSTTDYQIYAGARKVEQV-------PQY---NNVKAVHFDVDWTPEEMAKQLHGMDAIINV 70 (219)
T ss_dssp EEEEES-TTSHHHHHHHHHHTTSSCEEEEEESSGGGS-------CCC---TTEEEEECCTTSCHHHHHTTTTTCSEEEEC
T ss_pred eEEEEC-CCCHHHHHHHHHHHHCCCEEEEEECCccch-------hhc---CCceEEEecccCCHHHHHHHHcCCCEEEEC
Confidence 566666 4566665554 4789999999987421 111 469999999987 2 122468999976
Q ss_pred cccccc-----ChhHHHHHHHHHHhcccCCcEEEEEEcc-CCCCCC--------CCCcccCHHHHHHHH-hcCCCcEEEE
Q 024021 182 TFFCAI-----EPEMRAAWAQKIKDFLKPDGELITLMFP-ISDHVG--------GPPYKVSVSDYEEVL-QPMGFQAISI 246 (274)
Q Consensus 182 ~~~~~~-----~~~~~~~~l~~~~~~L~pgG~~~~~~~~-~~~~~~--------~~~~~~~~~~~~~~l-~~~Gf~~~~~ 246 (274)
.....- .......+++.+.+. . .+.++...-. ...... ...|..++...++++ +..|+...-+
T Consensus 71 ag~~~~~~~~~n~~~~~~l~~a~~~~-~-~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK~~~e~~~~~~~~i~~~il 148 (219)
T 3dqp_A 71 SGSGGKSLLKVDLYGAVKLMQAAEKA-E-VKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKHFADLYLTKETNLDYTII 148 (219)
T ss_dssp CCCTTSSCCCCCCHHHHHHHHHHHHT-T-CCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHHHHHHHHHHHSCCCEEEEE
T ss_pred CcCCCCCcEeEeHHHHHHHHHHHHHh-C-CCEEEEECcccccCCCcccccccccccHHHHHHHHHHHHHHhccCCcEEEE
Confidence 543321 111223344444331 1 2345543322 111110 112233556667777 7778776665
Q ss_pred ee
Q 024021 247 VD 248 (274)
Q Consensus 247 ~~ 248 (274)
..
T Consensus 149 rp 150 (219)
T 3dqp_A 149 QP 150 (219)
T ss_dssp EE
T ss_pred eC
Confidence 54
No 493
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=79.41 E-value=7.8 Score=27.78 Aligned_cols=107 Identities=17% Similarity=0.119 Sum_probs=56.5
Q ss_pred CCeEEEEcCCcchhHHHhhC----CCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEE-cccCCCCCCCCeeEEEeccc
Q 024021 109 KGRALVPGCGTGYDVVAMAS----PERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLK-ADFFTWCPTELFDLIFDYTF 183 (274)
Q Consensus 109 ~~~vLDiG~G~G~~~~~l~~----~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~D~v~~~~~ 183 (274)
+.+|+=+||| ..+..++. .|.+++.+|.+++..+...+... ..... .+..+.. ..+|+|+..-.
T Consensus 21 ~~~v~iiG~G--~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~-------~~~~~~~~~~~~~--~~~Divi~at~ 89 (144)
T 3oj0_A 21 GNKILLVGNG--MLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE-------YEYVLINDIDSLI--KNNDVIITATS 89 (144)
T ss_dssp CCEEEEECCS--HHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT-------CEEEECSCHHHHH--HTCSEEEECSC
T ss_pred CCEEEEECCC--HHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC-------CceEeecCHHHHh--cCCCEEEEeCC
Confidence 6799999985 45544433 67789999999887665444331 22221 1211111 35799887544
Q ss_pred ccccChhHHHHHHHHHHhcccCCcEEEEEEccCCCCCCCCCcccCHHHHHHHHh
Q 024021 184 FCAIEPEMRAAWAQKIKDFLKPDGELITLMFPISDHVGGPPYKVSVSDYEEVLQ 237 (274)
Q Consensus 184 ~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 237 (274)
..+. .+. ...+++|+.++-...+..-.. + .+.++.+++.+.++
T Consensus 90 ~~~~-------~~~--~~~l~~g~~vid~~~p~~~~~-~-~~~~~~d~l~~~~~ 132 (144)
T 3oj0_A 90 SKTP-------IVE--ERSLMPGKLFIDLGNPPNIER-G-NNVITLDEIYEISK 132 (144)
T ss_dssp CSSC-------SBC--GGGCCTTCEEEECCSSCSBCC-S-TTSEEHHHHHHHHH
T ss_pred CCCc-------Eee--HHHcCCCCEEEEccCCccCCC-C-CEEEeHHHHHHHHH
Confidence 3221 011 256788777655443222111 1 22345566665544
No 494
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=79.40 E-value=23 Score=28.48 Aligned_cols=62 Identities=15% Similarity=0.148 Sum_probs=44.0
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCC-CcceEEEEcccCC
Q 024021 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPN-AKFVSFLKADFFT 168 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~~~d~~~ 168 (274)
..++++|=.|++.|. .+..|++.|++|+.++.+++..+...+.+...+. ..++.++.+|+.+
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~ 74 (281)
T 3svt_A 9 FQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITN 74 (281)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTS
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCC
Confidence 456788888876552 2345556899999999999888777766654432 1268888888875
No 495
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=79.35 E-value=10 Score=30.94 Aligned_cols=77 Identities=9% Similarity=0.016 Sum_probs=51.3
Q ss_pred CCCeEEEEcCCcchh---HHHhhCCCC---eEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC----------
Q 024021 108 PKGRALVPGCGTGYD---VVAMASPER---YVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP---------- 171 (274)
Q Consensus 108 ~~~~vLDiG~G~G~~---~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~---------- 171 (274)
.++++|=.|++.|.- +..+++.|+ +|+.++.+++.++...+.+.......++.++.+|+.+...
T Consensus 32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 111 (287)
T 3rku_A 32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ 111 (287)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 357888888765532 234444565 9999999998887776665432212468899999987321
Q ss_pred -CCCeeEEEecccc
Q 024021 172 -TELFDLIFDYTFF 184 (274)
Q Consensus 172 -~~~~D~v~~~~~~ 184 (274)
.++.|+++.+...
T Consensus 112 ~~g~iD~lVnnAG~ 125 (287)
T 3rku_A 112 EFKDIDILVNNAGK 125 (287)
T ss_dssp GGCSCCEEEECCCC
T ss_pred hcCCCCEEEECCCc
Confidence 1468999987543
No 496
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=78.78 E-value=21 Score=28.72 Aligned_cols=72 Identities=11% Similarity=0.024 Sum_probs=48.6
Q ss_pred CeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC-----------CCCCe
Q 024021 110 GRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC-----------PTELF 175 (274)
Q Consensus 110 ~~vLDiG~G~G~---~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-----------~~~~~ 175 (274)
+++|=.|++.|. .+..|++.|++|+.++.+++.++......... .++.++.+|+.+.. .-++.
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 98 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK---TRVLPLTLDVRDRAAMSAAVDNLPEEFATL 98 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT---SCEEEEECCTTCHHHHHHHHHTCCGGGSSC
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC---CcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 577877765552 23455558999999999988777665554332 36889999998621 11467
Q ss_pred eEEEecccc
Q 024021 176 DLIFDYTFF 184 (274)
Q Consensus 176 D~v~~~~~~ 184 (274)
|+++.+..+
T Consensus 99 D~lvnnAG~ 107 (272)
T 2nwq_A 99 RGLINNAGL 107 (272)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999987543
No 497
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=78.66 E-value=18 Score=27.47 Aligned_cols=92 Identities=15% Similarity=0.136 Sum_probs=52.8
Q ss_pred eEEEEcCCcchhHHHhh----CCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC--CCCeeEEEecccc
Q 024021 111 RALVPGCGTGYDVVAMA----SPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP--TELFDLIFDYTFF 184 (274)
Q Consensus 111 ~vLDiG~G~G~~~~~l~----~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~D~v~~~~~~ 184 (274)
+||=.|+ +|..+..++ +.|.+|++++.++....... .+++++.+|+.+... -..+|+|+.....
T Consensus 2 kvlVtGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---------~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 71 (221)
T 3ew7_A 2 KIGIIGA-TGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH---------KDINILQKDIFDLTLSDLSDQNVVVDAYGI 71 (221)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC---------SSSEEEECCGGGCCHHHHTTCSEEEECCCS
T ss_pred eEEEEcC-CchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc---------CCCeEEeccccChhhhhhcCCCEEEECCcC
Confidence 5666654 555555444 47899999999886544321 358899999986421 1358999976544
Q ss_pred cccChhHHHHHHHHHHhcccCC--cEEEEE
Q 024021 185 CAIEPEMRAAWAQKIKDFLKPD--GELITL 212 (274)
Q Consensus 185 ~~~~~~~~~~~l~~~~~~L~pg--G~~~~~ 212 (274)
..-...........+.+.++.. +.+++.
T Consensus 72 ~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~ 101 (221)
T 3ew7_A 72 SPDEAEKHVTSLDHLISVLNGTVSPRLLVV 101 (221)
T ss_dssp STTTTTSHHHHHHHHHHHHCSCCSSEEEEE
T ss_pred CccccchHHHHHHHHHHHHHhcCCceEEEE
Confidence 2211111123334455555443 455543
No 498
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=78.60 E-value=23 Score=28.14 Aligned_cols=61 Identities=18% Similarity=0.055 Sum_probs=42.7
Q ss_pred CCCCeEEEEcCCcch---hHHHhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCC
Q 024021 107 LPKGRALVPGCGTGY---DVVAMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFT 168 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~---~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 168 (274)
..++++|=.|++.|. .+..|++.|++|+.++.+++.++.....+...+ ..++.++.+|+.+
T Consensus 8 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~ 71 (262)
T 3pk0_A 8 LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLG-SGKVIGVQTDVSD 71 (262)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTS-SSCEEEEECCTTS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC-CCcEEEEEcCCCC
Confidence 446778877766542 234455589999999999988877766665442 1368888999875
No 499
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=78.57 E-value=8.4 Score=30.48 Aligned_cols=74 Identities=19% Similarity=0.056 Sum_probs=49.7
Q ss_pred CCCCeEEEEcCCcchhHH----HhhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCCC-----------
Q 024021 107 LPKGRALVPGCGTGYDVV----AMASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWCP----------- 171 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~----~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~----------- 171 (274)
..+++||=.|++ |..+. .|++.|++|++++.++...+...+.+...+ .++.++.+|+.+...
T Consensus 11 l~~k~vlItGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (260)
T 3awd_A 11 LDNRVAIVTGGA-QNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEG--HDVSSVVMDVTNTESVQNAVRSVHEQ 87 (260)
T ss_dssp CTTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHH
Confidence 446778888765 44444 444589999999999877665555444332 468999999987211
Q ss_pred CCCeeEEEeccc
Q 024021 172 TELFDLIFDYTF 183 (274)
Q Consensus 172 ~~~~D~v~~~~~ 183 (274)
.+++|+++.+..
T Consensus 88 ~~~id~vi~~Ag 99 (260)
T 3awd_A 88 EGRVDILVACAG 99 (260)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 136899997654
No 500
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=78.40 E-value=8.4 Score=30.96 Aligned_cols=75 Identities=12% Similarity=0.039 Sum_probs=51.2
Q ss_pred CCCCeEEEEcCCcchhHHH----hhCCCCeEEEEeCChHHHHHHHHHhhcCCCCcceEEEEcccCCCC-----------C
Q 024021 107 LPKGRALVPGCGTGYDVVA----MASPERYVVGLEISDIAIKKAEELSSSLPNAKFVSFLKADFFTWC-----------P 171 (274)
Q Consensus 107 ~~~~~vLDiG~G~G~~~~~----l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-----------~ 171 (274)
..+++||=.|++ |..+.. |++.|++|++++.++...+...+.+...+ .++.++.+|+.+.. .
T Consensus 29 l~~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~ 105 (272)
T 1yb1_A 29 VTGEIVLITGAG-HGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG--AKVHTFVVDCSNREDIYSSAKKVKAE 105 (272)
T ss_dssp CTTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcC--CeEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 445788888765 445444 44489999999999887776655554433 46899999998721 0
Q ss_pred CCCeeEEEecccc
Q 024021 172 TELFDLIFDYTFF 184 (274)
Q Consensus 172 ~~~~D~v~~~~~~ 184 (274)
.+.+|+++.+...
T Consensus 106 ~g~iD~li~~Ag~ 118 (272)
T 1yb1_A 106 IGDVSILVNNAGV 118 (272)
T ss_dssp TCCCSEEEECCCC
T ss_pred CCCCcEEEECCCc
Confidence 1368999987543
Done!