Query 024023
Match_columns 274
No_of_seqs 122 out of 1223
Neff 9.0
Searched_HMMs 46136
Date Fri Mar 29 08:21:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024023.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024023hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3109 Haloacid dehalogenase- 100.0 4.2E-30 9.1E-35 206.2 19.2 220 20-256 14-235 (244)
2 PRK13288 pyrophosphatase PpaX; 100.0 2.7E-28 5.8E-33 204.1 15.2 199 20-250 2-212 (214)
3 TIGR01993 Pyr-5-nucltdase pyri 100.0 2.2E-27 4.8E-32 193.9 19.9 184 22-225 1-184 (184)
4 COG0546 Gph Predicted phosphat 100.0 1.9E-27 4E-32 199.8 17.5 199 19-249 2-218 (220)
5 PLN02770 haloacid dehalogenase 100.0 2.7E-27 5.8E-32 202.4 17.8 194 18-245 19-232 (248)
6 PRK13226 phosphoglycolate phos 100.0 3.1E-27 6.8E-32 199.7 17.3 196 20-248 11-224 (229)
7 PRK13478 phosphonoacetaldehyde 100.0 9.8E-27 2.1E-31 201.0 19.7 204 18-255 1-261 (267)
8 TIGR03351 PhnX-like phosphonat 99.9 2E-26 4.4E-31 193.4 19.6 195 21-248 1-219 (220)
9 PRK10563 6-phosphogluconate ph 99.9 7.9E-27 1.7E-31 196.1 16.1 196 19-247 2-211 (221)
10 TIGR01422 phosphonatase phosph 99.9 1.9E-26 4.1E-31 197.8 18.5 123 103-248 96-252 (253)
11 TIGR02253 CTE7 HAD superfamily 99.9 3.6E-26 7.7E-31 191.9 18.0 198 21-244 2-220 (221)
12 TIGR01449 PGP_bact 2-phosphogl 99.9 3.5E-26 7.6E-31 190.9 17.5 191 24-247 1-212 (213)
13 PRK10826 2-deoxyglucose-6-phos 99.9 3.4E-26 7.3E-31 192.4 17.2 195 19-246 5-217 (222)
14 PLN03243 haloacid dehalogenase 99.9 3.2E-26 6.9E-31 196.5 16.7 212 6-254 13-240 (260)
15 PRK11587 putative phosphatase; 99.9 5.6E-26 1.2E-30 190.6 17.6 192 19-245 1-204 (218)
16 PLN02575 haloacid dehalogenase 99.9 9.4E-26 2E-30 200.7 18.0 202 20-253 130-347 (381)
17 TIGR01454 AHBA_synth_RP 3-amin 99.9 1.6E-25 3.5E-30 186.0 18.3 192 24-249 1-204 (205)
18 PRK14988 GMP/IMP nucleotidase; 99.9 3.8E-25 8.3E-30 186.2 19.9 202 19-251 8-221 (224)
19 PRK13223 phosphoglycolate phos 99.9 1.3E-25 2.9E-30 194.2 16.9 202 18-251 10-232 (272)
20 PRK13222 phosphoglycolate phos 99.9 3.1E-25 6.6E-30 186.7 18.1 200 18-250 3-223 (226)
21 PRK13225 phosphoglycolate phos 99.9 8.5E-25 1.9E-29 188.8 20.7 197 20-253 61-272 (273)
22 TIGR02254 YjjG/YfnB HAD superf 99.9 7.6E-25 1.6E-29 184.0 19.1 199 21-248 1-224 (224)
23 PRK09449 dUMP phosphatase; Pro 99.9 6.6E-25 1.4E-29 184.7 18.4 123 104-249 93-223 (224)
24 PLN02940 riboflavin kinase 99.9 2.9E-25 6.2E-30 200.4 16.6 195 20-247 10-219 (382)
25 PRK10725 fructose-1-P/6-phosph 99.9 5.8E-25 1.3E-29 180.0 14.6 174 19-226 3-186 (188)
26 COG0637 Predicted phosphatase/ 99.9 1.2E-24 2.6E-29 182.7 15.9 195 20-247 1-215 (221)
27 COG1011 Predicted hydrolase (H 99.9 1.3E-23 2.7E-28 177.2 19.0 124 104-250 97-228 (229)
28 PRK10748 flavin mononucleotide 99.9 2.4E-23 5.1E-28 177.0 17.9 118 103-248 110-238 (238)
29 TIGR01428 HAD_type_II 2-haloal 99.9 7.4E-23 1.6E-27 169.1 19.4 104 103-229 89-195 (198)
30 PRK06698 bifunctional 5'-methy 99.9 2.2E-23 4.7E-28 193.1 16.7 202 19-251 239-456 (459)
31 PLN02779 haloacid dehalogenase 99.9 3.8E-23 8.3E-28 180.0 17.1 198 20-246 39-270 (286)
32 TIGR02009 PGMB-YQAB-SF beta-ph 99.9 2.1E-23 4.6E-28 170.2 13.8 170 21-225 1-185 (185)
33 TIGR01990 bPGM beta-phosphoglu 99.9 1.8E-23 3.9E-28 170.6 13.1 169 23-226 1-185 (185)
34 TIGR02252 DREG-2 REG-2-like, H 99.9 1.9E-22 4.2E-27 167.2 17.2 173 22-224 1-203 (203)
35 PF13419 HAD_2: Haloacid dehal 99.9 3.7E-23 7.9E-28 166.3 9.2 168 24-225 1-176 (176)
36 PHA02597 30.2 hypothetical pro 99.9 2.5E-22 5.4E-27 165.8 13.4 183 20-246 1-196 (197)
37 PLN02919 haloacid dehalogenase 99.9 1.5E-21 3.3E-26 195.3 17.9 194 19-245 73-286 (1057)
38 TIGR01509 HAD-SF-IA-v3 haloaci 99.9 2.5E-22 5.3E-27 163.4 9.8 97 105-225 84-183 (183)
39 TIGR00338 serB phosphoserine p 99.9 1.2E-21 2.6E-26 164.3 14.0 197 18-247 11-218 (219)
40 TIGR02247 HAD-1A3-hyp Epoxide 99.9 2.5E-21 5.5E-26 161.5 14.2 101 104-227 92-197 (211)
41 PRK09456 ?-D-glucose-1-phospha 99.9 2E-20 4.4E-25 154.7 17.0 102 105-229 83-188 (199)
42 TIGR01548 HAD-SF-IA-hyp1 haloa 99.9 2.3E-20 5E-25 154.1 15.5 88 107-218 107-197 (197)
43 TIGR01493 HAD-SF-IA-v2 Haloaci 99.8 4.6E-21 1E-25 155.2 10.5 89 103-218 87-175 (175)
44 PLN02811 hydrolase 99.8 1.5E-20 3.3E-25 157.9 12.8 185 28-246 1-208 (220)
45 TIGR01549 HAD-SF-IA-v1 haloaci 99.8 1.4E-19 3.1E-24 143.4 14.5 151 23-219 1-154 (154)
46 PLN02954 phosphoserine phospha 99.8 8E-19 1.7E-23 147.6 19.5 201 19-248 10-223 (224)
47 PRK08942 D,D-heptose 1,7-bisph 99.8 7.5E-19 1.6E-23 143.2 14.2 120 105-249 28-177 (181)
48 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.8 4.9E-19 1.1E-23 146.2 13.1 113 104-229 78-193 (201)
49 PRK06769 hypothetical protein; 99.8 1.1E-18 2.4E-23 141.1 12.7 121 105-248 27-171 (173)
50 PRK11133 serB phosphoserine ph 99.8 1.3E-18 2.7E-23 153.3 14.1 131 104-248 179-312 (322)
51 KOG3085 Predicted hydrolase (H 99.8 2.4E-18 5.2E-23 143.1 13.5 183 18-230 4-217 (237)
52 TIGR00213 GmhB_yaeD D,D-heptos 99.8 2.2E-18 4.7E-23 139.8 12.8 127 105-245 25-175 (176)
53 PRK13582 thrH phosphoserine ph 99.8 3.7E-18 7.9E-23 141.6 13.3 195 21-254 1-201 (205)
54 PRK09552 mtnX 2-hydroxy-3-keto 99.8 3.8E-18 8.2E-23 143.2 11.2 126 103-253 71-217 (219)
55 TIGR01691 enolase-ppase 2,3-di 99.8 6.3E-17 1.4E-21 135.2 17.9 103 103-230 92-200 (220)
56 KOG2914 Predicted haloacid-hal 99.8 1.6E-17 3.5E-22 137.7 13.8 193 19-244 8-218 (222)
57 TIGR01656 Histidinol-ppas hist 99.7 4.2E-18 9.1E-23 134.1 8.5 100 106-228 27-147 (147)
58 TIGR01685 MDP-1 magnesium-depe 99.7 8.6E-18 1.9E-22 135.0 6.9 104 103-229 42-160 (174)
59 COG0560 SerB Phosphoserine pho 99.7 8.4E-17 1.8E-21 133.8 12.9 193 19-240 3-201 (212)
60 TIGR01672 AphA HAD superfamily 99.7 2E-16 4.2E-21 133.3 14.8 98 103-230 111-215 (237)
61 TIGR01261 hisB_Nterm histidino 99.7 6.9E-17 1.5E-21 128.8 10.4 100 105-229 28-150 (161)
62 TIGR01662 HAD-SF-IIIA HAD-supe 99.7 1.4E-16 3.1E-21 123.0 11.4 94 106-226 25-131 (132)
63 TIGR02137 HSK-PSP phosphoserin 99.7 4E-16 8.7E-21 129.1 13.9 141 86-251 54-198 (203)
64 TIGR01489 DKMTPPase-SF 2,3-dik 99.7 1.2E-15 2.6E-20 124.5 14.9 120 87-222 59-185 (188)
65 cd01427 HAD_like Haloacid deha 99.7 5.6E-16 1.2E-20 119.0 9.9 116 103-225 21-139 (139)
66 TIGR01490 HAD-SF-IB-hyp1 HAD-s 99.7 2.6E-15 5.7E-20 124.2 14.2 109 105-226 86-198 (202)
67 TIGR01664 DNA-3'-Pase DNA 3'-p 99.7 5.2E-16 1.1E-20 124.4 9.6 93 107-224 43-160 (166)
68 TIGR03333 salvage_mtnX 2-hydro 99.6 3.4E-15 7.4E-20 124.9 12.8 125 104-253 68-213 (214)
69 TIGR01458 HAD-SF-IIA-hyp3 HAD- 99.6 6.9E-16 1.5E-20 132.5 8.8 121 108-248 122-254 (257)
70 TIGR01488 HAD-SF-IB Haloacid D 99.6 1.5E-14 3.2E-19 117.0 13.5 103 104-218 71-177 (177)
71 TIGR01670 YrbI-phosphatas 3-de 99.6 5.5E-15 1.2E-19 117.2 9.7 111 111-254 36-151 (154)
72 TIGR01668 YqeG_hyp_ppase HAD s 99.6 1.8E-14 3.9E-19 116.1 12.5 93 106-230 43-140 (170)
73 PRK11009 aphA acid phosphatase 99.6 2.1E-14 4.6E-19 120.9 13.3 109 89-230 98-215 (237)
74 PRK09484 3-deoxy-D-manno-octul 99.6 3.3E-15 7.2E-20 121.9 7.4 105 113-250 58-170 (183)
75 TIGR02726 phenyl_P_delta pheny 99.6 2.3E-15 5E-20 120.7 6.1 95 113-239 44-139 (169)
76 PLN02645 phosphoglycolate phos 99.6 1.5E-15 3.2E-20 133.9 4.2 73 178-250 226-309 (311)
77 TIGR01452 PGP_euk phosphoglyco 99.6 3.5E-15 7.6E-20 129.7 6.4 65 180-244 200-279 (279)
78 PRK05446 imidazole glycerol-ph 99.5 5.8E-14 1.3E-18 124.6 12.2 99 104-227 28-149 (354)
79 PHA02530 pseT polynucleotide k 99.5 7.8E-14 1.7E-18 122.5 11.2 102 105-229 186-299 (300)
80 TIGR01681 HAD-SF-IIIC HAD-supe 99.5 5.7E-14 1.2E-18 107.9 9.0 85 106-217 29-126 (128)
81 PF06888 Put_Phosphatase: Puta 99.5 3E-13 6.4E-18 113.4 14.0 129 87-229 58-200 (234)
82 COG0647 NagD Predicted sugar p 99.5 4.6E-14 1E-18 120.4 8.9 73 178-250 186-267 (269)
83 TIGR01457 HAD-SF-IIA-hyp2 HAD- 99.5 1.9E-13 4.1E-18 116.9 10.3 68 177-244 173-249 (249)
84 PRK10444 UMP phosphatase; Prov 99.5 3.4E-14 7.3E-19 121.2 5.6 69 177-245 169-246 (248)
85 PRK11590 hypothetical protein; 99.5 6.6E-13 1.4E-17 110.8 13.1 104 105-224 94-201 (211)
86 PF00702 Hydrolase: haloacid d 99.5 9.7E-14 2.1E-18 115.4 7.9 87 105-219 126-215 (215)
87 PRK01158 phosphoglycolate phos 99.4 1.8E-13 3.9E-18 115.5 6.5 60 181-240 155-215 (230)
88 PF13242 Hydrolase_like: HAD-h 99.4 5.2E-13 1.1E-17 92.7 7.3 65 180-244 2-75 (75)
89 PRK10530 pyridoxal phosphate ( 99.4 1.1E-12 2.4E-17 113.3 10.7 70 181-251 197-270 (272)
90 COG2179 Predicted hydrolase of 99.4 2.1E-12 4.5E-17 100.5 10.2 79 117-227 60-139 (175)
91 KOG1615 Phosphoserine phosphat 99.4 1.1E-11 2.4E-16 98.5 13.7 127 103-245 85-222 (227)
92 COG0241 HisB Histidinol phosph 99.4 1.6E-11 3.5E-16 98.4 14.4 121 106-246 31-174 (181)
93 TIGR01482 SPP-subfamily Sucros 99.4 6.1E-13 1.3E-17 111.8 6.1 61 181-241 147-208 (225)
94 TIGR01456 CECR5 HAD-superfamil 99.3 1.5E-11 3.2E-16 109.0 12.8 72 177-248 228-320 (321)
95 TIGR01545 YfhB_g-proteo haloac 99.3 4.4E-11 9.5E-16 99.6 12.9 103 105-224 93-200 (210)
96 KOG3120 Predicted haloacid deh 99.3 2.5E-11 5.5E-16 98.3 11.0 149 87-254 71-249 (256)
97 TIGR01544 HAD-SF-IE haloacid d 99.3 1.1E-10 2.3E-15 100.1 14.6 122 84-218 103-230 (277)
98 TIGR01686 FkbH FkbH-like domai 99.3 1.7E-11 3.6E-16 108.7 9.7 87 107-221 32-125 (320)
99 smart00577 CPDc catalytic doma 99.3 4E-12 8.6E-17 100.1 5.0 93 104-222 43-138 (148)
100 TIGR01487 SPP-like sucrose-pho 99.3 3.9E-12 8.5E-17 106.3 5.0 60 181-240 145-205 (215)
101 PRK00192 mannosyl-3-phosphogly 99.3 7.7E-11 1.7E-15 102.2 13.2 72 183-254 190-272 (273)
102 KOG2882 p-Nitrophenyl phosphat 99.2 1.9E-10 4.2E-15 97.8 13.7 79 170-248 212-303 (306)
103 PRK08238 hypothetical protein; 99.2 2.9E-10 6.2E-15 105.4 15.8 96 104-229 70-168 (479)
104 TIGR01663 PNK-3'Pase polynucle 99.2 8.5E-11 1.9E-15 109.5 10.9 89 107-220 198-305 (526)
105 COG4229 Predicted enolase-phos 99.2 9.3E-10 2E-14 86.7 14.7 196 20-242 3-224 (229)
106 PRK10513 sugar phosphate phosp 99.2 1.1E-10 2.3E-15 101.0 9.6 71 181-251 194-267 (270)
107 PRK10976 putative hydrolase; P 99.2 6.9E-11 1.5E-15 102.0 8.3 71 181-251 188-263 (266)
108 COG1778 Low specificity phosph 99.2 5.9E-11 1.3E-15 91.3 6.5 82 112-225 44-125 (170)
109 PRK15126 thiamin pyrimidine py 99.2 2.8E-10 6.1E-15 98.5 10.9 72 181-252 186-262 (272)
110 PLN02887 hydrolase family prot 99.2 2.7E-10 5.9E-15 107.5 11.6 61 181-241 505-566 (580)
111 TIGR02244 HAD-IG-Ncltidse HAD 99.1 1.9E-09 4E-14 95.4 15.6 118 104-226 182-323 (343)
112 COG0561 Cof Predicted hydrolas 99.1 2.3E-10 5E-15 98.6 9.5 72 181-252 187-261 (264)
113 KOG3040 Predicted sugar phosph 99.1 7.9E-11 1.7E-15 94.7 5.3 86 163-249 163-257 (262)
114 TIGR02463 MPGP_rel mannosyl-3- 99.1 4.2E-10 9E-15 94.4 9.1 43 181-223 177-219 (221)
115 TIGR01460 HAD-SF-IIA Haloacid 99.1 2.4E-09 5.2E-14 90.9 13.3 50 179-228 185-236 (236)
116 PRK03669 mannosyl-3-phosphogly 99.1 1.4E-09 3E-14 94.2 11.2 74 180-253 184-269 (271)
117 PF12710 HAD: haloacid dehalog 99.1 1.9E-09 4.2E-14 88.0 11.1 95 109-216 92-192 (192)
118 TIGR01533 lipo_e_P4 5'-nucleot 99.1 2.9E-09 6.4E-14 91.2 12.4 93 89-215 105-204 (266)
119 PF12689 Acid_PPase: Acid Phos 99.0 1.3E-09 2.8E-14 87.1 9.1 99 103-229 42-154 (169)
120 PTZ00445 p36-lilke protein; Pr 99.0 4.8E-09 1E-13 85.5 9.3 103 115-229 87-208 (219)
121 TIGR01459 HAD-SF-IIA-hyp4 HAD- 98.9 1E-09 2.2E-14 93.5 4.4 96 108-227 140-242 (242)
122 COG4359 Uncharacterized conser 98.9 3.6E-08 7.8E-13 78.0 11.7 149 87-252 59-215 (220)
123 TIGR01485 SPP_plant-cyano sucr 98.9 1.3E-07 2.8E-12 80.8 15.9 49 181-229 165-213 (249)
124 TIGR00099 Cof-subfamily Cof su 98.9 2.9E-09 6.3E-14 91.3 5.5 60 181-240 186-246 (256)
125 TIGR01459 HAD-SF-IIA-hyp4 HAD- 98.8 8.3E-09 1.8E-13 87.9 7.6 86 107-220 25-116 (242)
126 PF09419 PGP_phosphatase: Mito 98.8 2E-08 4.2E-13 80.0 9.1 76 121-229 79-167 (168)
127 TIGR02471 sucr_syn_bact_C sucr 98.8 3.4E-08 7.3E-13 83.7 11.0 46 181-226 157-202 (236)
128 PF08645 PNK3P: Polynucleotide 98.8 1.6E-08 3.5E-13 80.4 6.4 90 109-223 32-153 (159)
129 TIGR01512 ATPase-IB2_Cd heavy 98.7 4.3E-08 9.3E-13 92.8 8.5 109 105-247 361-477 (536)
130 PLN02177 glycerol-3-phosphate 98.7 4.2E-07 9.2E-12 84.6 13.4 100 107-224 111-213 (497)
131 TIGR01486 HAD-SF-IIB-MPGP mann 98.7 7.6E-07 1.7E-11 76.4 13.9 48 181-228 174-223 (256)
132 TIGR01525 ATPase-IB_hvy heavy 98.6 5.3E-08 1.1E-12 92.7 7.1 121 105-261 383-511 (556)
133 TIGR02251 HIF-SF_euk Dullard-l 98.6 1.8E-08 4E-13 80.4 3.3 115 105-252 41-158 (162)
134 COG4087 Soluble P-type ATPase 98.6 2.9E-07 6.3E-12 68.9 9.2 115 105-251 29-149 (152)
135 PF06941 NT5C: 5' nucleotidase 98.6 4.7E-08 1E-12 80.2 5.1 165 24-248 5-185 (191)
136 TIGR01684 viral_ppase viral ph 98.6 3.4E-07 7.5E-12 78.7 10.3 103 109-212 149-264 (301)
137 PRK12702 mannosyl-3-phosphogly 98.5 2.6E-06 5.6E-11 73.5 13.6 43 182-224 207-251 (302)
138 TIGR01522 ATPase-IIA2_Ca golgi 98.5 5E-07 1.1E-11 90.4 10.4 136 106-248 528-670 (884)
139 PRK14502 bifunctional mannosyl 98.5 7.3E-07 1.6E-11 84.8 10.6 46 181-226 611-658 (694)
140 TIGR01511 ATPase-IB1_Cu copper 98.5 1E-06 2.2E-11 83.9 10.5 121 105-262 404-531 (562)
141 TIGR02461 osmo_MPG_phos mannos 98.4 6.8E-07 1.5E-11 75.3 5.9 43 181-223 179-223 (225)
142 PHA03398 viral phosphatase sup 98.4 2.8E-06 6E-11 73.2 9.4 104 109-212 151-266 (303)
143 PLN02382 probable sucrose-phos 98.3 1.3E-05 2.8E-10 73.4 13.9 49 181-229 173-224 (413)
144 PF05116 S6PP: Sucrose-6F-phos 98.3 2E-06 4.3E-11 73.5 6.6 47 182-229 164-210 (247)
145 PRK10671 copA copper exporting 98.3 5.5E-06 1.2E-10 82.6 10.4 109 106-249 650-765 (834)
146 TIGR01675 plant-AP plant acid 98.2 2.7E-05 5.8E-10 65.3 12.1 106 89-226 107-222 (229)
147 TIGR00685 T6PP trehalose-phosp 98.2 5.8E-06 1.3E-10 70.5 8.1 71 182-252 166-243 (244)
148 PF05761 5_nucleotid: 5' nucle 98.2 3.8E-05 8.3E-10 70.7 13.7 118 104-226 181-324 (448)
149 PLN02423 phosphomannomutase 98.2 3.4E-05 7.5E-10 65.8 11.8 42 181-227 187-232 (245)
150 TIGR01116 ATPase-IIA1_Ca sarco 98.1 2E-05 4.4E-10 79.3 10.8 135 106-248 537-682 (917)
151 PF03767 Acid_phosphat_B: HAD 98.1 8.5E-06 1.8E-10 68.7 6.0 99 106-227 115-223 (229)
152 COG4996 Predicted phosphatase 98.0 1.1E-05 2.5E-10 60.5 5.6 83 103-212 38-129 (164)
153 COG2503 Predicted secreted aci 98.0 5.8E-05 1.3E-09 62.7 9.2 93 86-212 106-206 (274)
154 smart00775 LNS2 LNS2 domain. T 97.9 0.00019 4.1E-09 56.9 10.3 101 108-222 29-142 (157)
155 PF11019 DUF2608: Protein of u 97.8 0.0012 2.6E-08 56.5 15.4 118 109-230 87-213 (252)
156 PRK14010 potassium-transportin 97.8 0.00016 3.4E-09 70.0 10.3 107 106-247 441-554 (673)
157 PF08282 Hydrolase_3: haloacid 97.8 1.7E-05 3.6E-10 67.0 3.2 63 181-243 184-247 (254)
158 PRK11033 zntA zinc/cadmium/mer 97.8 0.0002 4.3E-09 70.5 11.1 122 106-265 568-696 (741)
159 TIGR01680 Veg_Stor_Prot vegeta 97.7 0.00065 1.4E-08 58.1 12.1 49 103-152 142-196 (275)
160 TIGR01517 ATPase-IIB_Ca plasma 97.7 9.4E-05 2E-09 74.7 8.2 151 106-264 579-736 (941)
161 TIGR01497 kdpB K+-transporting 97.7 0.0002 4.3E-09 69.2 9.7 107 106-247 446-559 (675)
162 PRK10517 magnesium-transportin 97.7 0.00011 2.3E-09 73.8 7.6 131 107-247 551-688 (902)
163 PF03031 NIF: NLI interacting 97.7 1.1E-05 2.5E-10 63.9 0.6 89 105-219 35-126 (159)
164 PRK15122 magnesium-transportin 97.7 0.00011 2.4E-09 73.7 7.6 133 106-248 550-689 (903)
165 PRK10187 trehalose-6-phosphate 97.7 0.00024 5.1E-09 61.4 8.6 73 181-256 172-248 (266)
166 PRK01122 potassium-transportin 97.7 0.00029 6.3E-09 68.2 10.0 108 106-248 445-559 (679)
167 TIGR01524 ATPase-IIIB_Mg magne 97.7 0.00018 3.9E-09 72.1 8.8 131 107-247 516-653 (867)
168 TIGR01523 ATPase-IID_K-Na pota 97.6 0.00017 3.8E-09 73.4 8.6 136 106-248 646-798 (1053)
169 TIGR01484 HAD-SF-IIB HAD-super 97.6 6.9E-05 1.5E-09 61.8 4.1 43 181-223 161-203 (204)
170 COG4030 Uncharacterized protei 97.5 0.0027 5.8E-08 52.5 12.4 150 104-254 81-267 (315)
171 COG2217 ZntA Cation transport 97.5 0.00026 5.7E-09 68.7 7.7 107 106-247 537-650 (713)
172 KOG2630 Enolase-phosphatase E- 97.5 0.0032 7E-08 52.1 12.7 100 106-230 123-228 (254)
173 COG3700 AphA Acid phosphatase 97.5 0.00053 1.1E-08 54.4 7.2 76 118-225 129-210 (237)
174 TIGR01647 ATPase-IIIA_H plasma 97.4 0.00059 1.3E-08 67.4 9.0 137 106-247 442-585 (755)
175 TIGR02250 FCP1_euk FCP1-like p 97.4 0.00031 6.7E-09 55.6 5.5 85 104-216 56-144 (156)
176 COG0474 MgtA Cation transport 97.4 0.00047 1E-08 69.5 8.0 118 106-230 547-669 (917)
177 KOG0202 Ca2+ transporting ATPa 97.3 0.00082 1.8E-08 65.0 7.8 136 106-248 584-730 (972)
178 TIGR01106 ATPase-IIC_X-K sodiu 97.3 0.0017 3.8E-08 66.1 10.5 136 106-247 568-735 (997)
179 COG5663 Uncharacterized conser 97.2 0.0024 5.1E-08 50.3 8.5 44 190-237 128-172 (194)
180 PLN02499 glycerol-3-phosphate 97.1 0.012 2.6E-07 54.6 13.3 97 108-226 98-197 (498)
181 TIGR02245 HAD_IIID1 HAD-superf 97.0 0.0076 1.6E-07 49.4 9.6 129 107-253 46-180 (195)
182 PLN02645 phosphoglycolate phos 97.0 0.0059 1.3E-07 54.0 9.6 86 107-224 45-136 (311)
183 TIGR01689 EcbF-BcbF capsule bi 96.8 0.0061 1.3E-07 46.4 7.3 45 107-153 25-87 (126)
184 PTZ00174 phosphomannomutase; P 96.8 0.0011 2.5E-08 56.5 3.7 43 181-227 186-232 (247)
185 TIGR01652 ATPase-Plipid phosph 96.8 0.0011 2.5E-08 67.8 4.0 50 199-249 768-820 (1057)
186 PRK14501 putative bifunctional 96.8 0.0039 8.5E-08 61.5 7.5 70 181-252 655-724 (726)
187 PF05152 DUF705: Protein of un 96.6 0.019 4.2E-07 49.2 9.6 97 115-212 154-260 (297)
188 PLN02580 trehalose-phosphatase 96.6 0.0097 2.1E-07 53.8 8.1 71 182-253 300-378 (384)
189 COG3882 FkbH Predicted enzyme 96.6 0.011 2.4E-07 54.1 8.2 82 115-220 267-348 (574)
190 KOG0207 Cation transport ATPas 96.5 0.013 2.7E-07 57.6 8.7 102 111-246 731-835 (951)
191 COG5610 Predicted hydrolase (H 96.4 0.0064 1.4E-07 55.2 5.8 112 91-225 82-201 (635)
192 TIGR01657 P-ATPase-V P-type AT 96.3 0.04 8.8E-07 56.7 11.6 142 107-249 657-852 (1054)
193 PLN03190 aminophospholipid tra 96.3 0.004 8.6E-08 64.2 4.1 63 200-263 872-937 (1178)
194 TIGR01494 ATPase_P-type ATPase 96.1 0.033 7.1E-07 52.6 9.1 94 106-240 347-443 (499)
195 PLN02205 alpha,alpha-trehalose 96.1 0.017 3.6E-07 57.8 7.3 75 181-255 760-848 (854)
196 KOG2469 IMP-GMP specific 5'-nu 96.1 0.095 2.1E-06 47.1 11.1 114 109-227 204-334 (424)
197 PF13344 Hydrolase_6: Haloacid 95.6 0.083 1.8E-06 38.5 7.7 81 106-220 14-100 (101)
198 TIGR01658 EYA-cons_domain eyes 95.4 0.1 2.2E-06 43.9 8.2 78 123-227 179-258 (274)
199 KOG0210 P-type ATPase [Inorgan 95.2 0.17 3.6E-06 48.7 9.8 77 184-263 769-847 (1051)
200 PF08235 LNS2: LNS2 (Lipin/Ned 95.1 0.17 3.6E-06 40.0 8.2 21 202-222 122-142 (157)
201 COG1877 OtsB Trehalose-6-phosp 95.1 0.067 1.5E-06 46.0 6.4 48 182-229 181-231 (266)
202 KOG2961 Predicted hydrolase (H 94.8 0.11 2.4E-06 40.4 6.1 48 182-229 117-170 (190)
203 KOG2470 Similar to IMP-GMP spe 94.7 0.057 1.2E-06 47.6 4.9 112 109-225 243-374 (510)
204 COG3769 Predicted hydrolase (H 94.6 0.88 1.9E-05 37.9 11.2 41 185-226 193-235 (274)
205 PTZ00174 phosphomannomutase; P 94.5 0.052 1.1E-06 46.3 4.3 37 19-57 3-39 (247)
206 PLN03017 trehalose-phosphatase 94.2 0.26 5.7E-06 44.4 8.1 74 182-255 282-362 (366)
207 PLN02151 trehalose-phosphatase 94.1 0.23 4.9E-06 44.6 7.6 71 182-253 268-346 (354)
208 PF08282 Hydrolase_3: haloacid 94.0 0.043 9.4E-07 45.9 2.9 26 24-49 1-26 (254)
209 COG0647 NagD Predicted sugar p 93.5 1.3 2.8E-05 38.2 11.0 141 103-254 21-183 (269)
210 TIGR01452 PGP_euk phosphoglyco 93.2 0.7 1.5E-05 40.1 9.1 84 107-223 19-108 (279)
211 PF05822 UMPH-1: Pyrimidine 5' 93.2 0.6 1.3E-05 39.6 8.2 118 86-218 74-198 (246)
212 KOG0206 P-type ATPase [General 93.1 0.24 5.1E-06 50.8 6.5 48 198-246 793-843 (1151)
213 TIGR01484 HAD-SF-IIB HAD-super 92.2 0.095 2.1E-06 43.0 2.2 27 23-49 1-28 (204)
214 PLN02580 trehalose-phosphatase 92.0 0.38 8.2E-06 43.7 5.9 34 106-139 141-176 (384)
215 PF06437 ISN1: IMP-specific 5' 91.4 1.3 2.9E-05 39.7 8.4 44 184-229 350-402 (408)
216 COG4502 5'(3')-deoxyribonucleo 91.2 0.15 3.3E-06 39.1 2.1 114 20-153 2-123 (180)
217 COG2216 KdpB High-affinity K+ 91.1 0.66 1.4E-05 43.3 6.5 119 108-261 449-603 (681)
218 PLN02151 trehalose-phosphatase 91.0 0.51 1.1E-05 42.3 5.6 33 106-138 120-154 (354)
219 KOG1605 TFIIF-interacting CTD 91.0 0.054 1.2E-06 46.4 -0.6 93 105-223 130-225 (262)
220 PRK10187 trehalose-6-phosphate 90.9 0.3 6.5E-06 42.1 4.0 29 21-49 14-47 (266)
221 TIGR01457 HAD-SF-IIA-hyp2 HAD- 90.1 8.1 0.00018 32.8 12.1 135 109-254 20-171 (249)
222 KOG0204 Calcium transporting A 89.7 1.1 2.4E-05 44.3 6.9 132 108-247 649-790 (1034)
223 KOG0203 Na+/K+ ATPase, alpha s 89.2 2 4.3E-05 42.6 8.2 116 108-225 595-731 (1019)
224 PF13344 Hydrolase_6: Haloacid 88.8 0.19 4.1E-06 36.6 0.9 18 24-41 1-18 (101)
225 PF06189 5-nucleotidase: 5'-nu 87.4 3 6.5E-05 35.6 7.3 73 119-229 186-261 (264)
226 PRK10444 UMP phosphatase; Prov 86.7 13 0.00028 31.6 11.1 133 107-254 18-167 (248)
227 KOG3128 Uncharacterized conser 86.7 1.9 4.2E-05 36.6 5.7 93 111-217 146-246 (298)
228 TIGR00685 T6PP trehalose-phosp 85.0 0.52 1.1E-05 40.0 1.7 15 20-34 2-16 (244)
229 PLN03064 alpha,alpha-trehalose 85.0 1.2 2.5E-05 45.2 4.4 36 106-141 622-661 (934)
230 KOG3107 Predicted haloacid deh 84.5 4.5 9.7E-05 36.4 7.2 44 183-227 409-452 (468)
231 PLN03063 alpha,alpha-trehalose 82.9 2.1 4.6E-05 42.9 5.2 78 181-258 676-790 (797)
232 PLN03017 trehalose-phosphatase 80.8 1.3 2.8E-05 39.9 2.6 30 20-49 110-144 (366)
233 PF02358 Trehalose_PPase: Treh 79.1 2.1 4.6E-05 36.0 3.3 59 182-240 164-233 (235)
234 PRK14501 putative bifunctional 78.2 2 4.3E-05 42.7 3.2 15 20-34 491-505 (726)
235 TIGR01460 HAD-SF-IIA Haloacid 76.5 26 0.00055 29.5 9.2 49 105-153 13-68 (236)
236 PF06014 DUF910: Bacterial pro 76.0 1.4 3E-05 28.8 1.0 26 187-216 6-31 (62)
237 smart00577 CPDc catalytic doma 75.6 1.9 4.1E-05 33.5 1.9 16 21-36 2-17 (148)
238 PLN02205 alpha,alpha-trehalose 73.6 3.4 7.3E-05 41.8 3.5 17 20-36 595-611 (854)
239 TIGR02468 sucrsPsyn_pln sucros 73.3 10 0.00022 39.1 6.7 40 181-221 954-995 (1050)
240 PLN03063 alpha,alpha-trehalose 71.7 19 0.00041 36.3 8.2 35 106-140 532-570 (797)
241 TIGR01458 HAD-SF-IIA-hyp3 HAD- 68.9 5.5 0.00012 34.1 3.3 47 107-153 22-74 (257)
242 KOG3189 Phosphomannomutase [Li 68.8 4.5 9.8E-05 33.2 2.6 28 22-49 12-39 (252)
243 KOG1618 Predicted phosphatase 68.7 9 0.0002 33.8 4.5 59 171-229 260-343 (389)
244 PLN02588 glycerol-3-phosphate 67.5 16 0.00036 34.4 6.2 42 107-153 134-176 (525)
245 TIGR02251 HIF-SF_euk Dullard-l 65.4 4.1 8.9E-05 32.2 1.7 15 22-36 2-16 (162)
246 TIGR02250 FCP1_euk FCP1-like p 65.4 4.5 9.7E-05 31.9 1.9 18 20-37 5-22 (156)
247 COG5083 SMP2 Uncharacterized p 65.3 3.5 7.6E-05 37.8 1.4 28 195-222 489-517 (580)
248 COG2241 CobL Precorrin-6B meth 61.1 26 0.00056 29.1 5.7 88 109-227 57-148 (210)
249 COG0078 ArgF Ornithine carbamo 60.5 1.2E+02 0.0026 26.7 11.3 40 186-226 139-184 (310)
250 PRK10513 sugar phosphate phosp 60.4 25 0.00054 29.9 5.9 48 106-153 20-70 (270)
251 KOG2456 Aldehyde dehydrogenase 59.9 74 0.0016 29.2 8.6 105 106-243 141-256 (477)
252 PF02358 Trehalose_PPase: Treh 58.2 5.1 0.00011 33.6 1.2 10 25-34 1-10 (235)
253 KOG0323 TFIIF-interacting CTD 53.9 25 0.00053 34.2 5.0 52 105-156 200-255 (635)
254 PRK00192 mannosyl-3-phosphogly 53.6 28 0.0006 29.8 5.0 40 106-145 21-63 (273)
255 COG4483 Uncharacterized protei 52.9 14 0.00031 24.3 2.3 27 187-217 6-32 (68)
256 COG4850 Uncharacterized conser 52.0 61 0.0013 28.9 6.7 81 104-213 194-292 (373)
257 KOG2882 p-Nitrophenyl phosphat 50.6 58 0.0012 28.6 6.3 38 106-143 38-81 (306)
258 TIGR01487 SPP-like sucrose-pho 48.9 35 0.00077 27.9 4.8 39 106-144 18-59 (215)
259 TIGR02461 osmo_MPG_phos mannos 48.2 34 0.00073 28.6 4.6 31 114-144 26-56 (225)
260 PRK01158 phosphoglycolate phos 47.8 39 0.00085 27.8 5.0 38 107-144 21-61 (230)
261 TIGR00715 precor6x_red precorr 47.5 36 0.00079 29.2 4.7 61 187-251 188-254 (256)
262 PRK00994 F420-dependent methyl 47.2 79 0.0017 26.8 6.3 43 182-227 73-117 (277)
263 PF02571 CbiJ: Precorrin-6x re 47.0 1.8E+02 0.0039 24.8 10.5 61 185-249 183-248 (249)
264 PF14336 DUF4392: Domain of un 46.2 1.2E+02 0.0026 26.5 7.8 30 113-142 70-100 (291)
265 KOG1359 Glycine C-acetyltransf 44.6 72 0.0016 28.1 5.9 48 182-229 322-378 (417)
266 PRK12415 fructose 1,6-bisphosp 43.6 82 0.0018 27.9 6.2 55 175-229 130-188 (322)
267 COG0561 Cof Predicted hydrolas 43.6 61 0.0013 27.4 5.6 39 106-144 20-61 (264)
268 KOG2134 Polynucleotide kinase 42.2 14 0.00031 33.4 1.4 18 20-37 74-91 (422)
269 KOG0209 P-type ATPase [Inorgan 42.0 26 0.00056 35.2 3.2 30 200-229 807-836 (1160)
270 TIGR02463 MPGP_rel mannosyl-3- 41.2 53 0.0011 26.9 4.7 31 113-143 26-56 (221)
271 TIGR00099 Cof-subfamily Cof su 41.2 61 0.0013 27.2 5.2 38 106-143 16-56 (256)
272 PRK11840 bifunctional sulfur c 40.8 2.7E+02 0.0058 24.9 9.8 97 104-230 176-282 (326)
273 PF13535 ATP-grasp_4: ATP-gras 40.5 1.7E+02 0.0036 22.7 7.4 71 185-256 5-76 (184)
274 PRK15126 thiamin pyrimidine py 40.4 59 0.0013 27.7 5.0 39 106-144 19-60 (272)
275 cd00885 cinA Competence-damage 39.8 85 0.0018 25.0 5.5 89 184-272 20-124 (170)
276 KOG2832 TFIIF-interacting CTD 39.7 57 0.0012 29.4 4.7 80 106-211 214-295 (393)
277 TIGR00877 purD phosphoribosyla 38.8 3.1E+02 0.0067 25.0 10.1 69 185-254 105-175 (423)
278 PRK10976 putative hydrolase; P 38.4 64 0.0014 27.3 4.9 39 106-144 19-60 (266)
279 smart00475 53EXOc 5'-3' exonuc 38.3 7.2 0.00016 33.5 -1.0 108 109-223 87-199 (259)
280 PRK12702 mannosyl-3-phosphogly 37.9 69 0.0015 28.2 4.9 39 107-145 19-60 (302)
281 TIGR01456 CECR5 HAD-superfamil 37.6 1.7E+02 0.0038 25.8 7.6 83 105-223 15-108 (321)
282 TIGR01486 HAD-SF-IIB-MPGP mann 37.5 80 0.0017 26.6 5.3 31 113-143 26-56 (256)
283 PRK03669 mannosyl-3-phosphogly 36.7 95 0.0021 26.5 5.7 36 108-143 26-64 (271)
284 PRK08057 cobalt-precorrin-6x r 36.5 77 0.0017 27.0 5.0 63 185-251 179-246 (248)
285 PF01993 MTD: methylene-5,6,7, 36.1 91 0.002 26.5 5.1 43 182-227 72-116 (276)
286 PRK10530 pyridoxal phosphate ( 35.0 70 0.0015 27.0 4.6 39 106-144 20-61 (272)
287 TIGR01482 SPP-subfamily Sucros 34.7 96 0.0021 25.3 5.3 37 107-143 16-55 (225)
288 PF10113 Fibrillarin_2: Fibril 34.3 99 0.0021 28.5 5.4 44 185-228 208-255 (505)
289 COG1058 CinA Predicted nucleot 32.2 2.1E+02 0.0046 24.6 6.9 47 182-228 20-69 (255)
290 PF04413 Glycos_transf_N: 3-De 31.4 74 0.0016 25.7 3.9 78 104-213 103-185 (186)
291 PF05690 ThiG: Thiazole biosyn 31.3 3.3E+02 0.0072 23.2 8.8 98 103-229 101-207 (247)
292 PRK05294 carB carbamoyl phosph 31.2 4.5E+02 0.0098 27.6 10.4 69 185-253 670-738 (1066)
293 PRK13789 phosphoribosylamine-- 30.8 4.3E+02 0.0094 24.4 10.4 69 185-253 109-177 (426)
294 COG1494 GlpX Fructose-1,6-bisp 30.6 2.5E+02 0.0053 24.7 6.9 70 160-229 115-188 (332)
295 TIGR03674 fen_arch flap struct 30.4 15 0.00033 32.9 -0.3 99 107-222 131-248 (338)
296 cd06537 CIDE_N_B CIDE_N domain 29.6 33 0.00072 23.8 1.3 16 22-37 40-55 (81)
297 KOG1618 Predicted phosphatase 29.4 79 0.0017 28.1 3.9 83 106-224 51-144 (389)
298 PF06506 PrpR_N: Propionate ca 29.1 1.7E+02 0.0037 23.2 5.7 26 202-228 127-152 (176)
299 cd06539 CIDE_N_A CIDE_N domain 29.0 37 0.0008 23.4 1.5 16 22-37 41-56 (78)
300 PF02350 Epimerase_2: UDP-N-ac 29.0 1.2E+02 0.0026 27.2 5.2 81 122-228 12-100 (346)
301 PRK14976 5'-3' exonuclease; Pr 28.8 14 0.0003 32.2 -0.8 107 108-223 92-204 (281)
302 KOG0205 Plasma membrane H+-tra 28.5 2E+02 0.0044 28.4 6.7 111 108-226 494-611 (942)
303 smart00266 CAD Domains present 28.1 42 0.00092 22.9 1.6 16 22-37 39-54 (74)
304 PRK12388 fructose-1,6-bisphosp 28.0 4.3E+02 0.0093 23.5 8.2 66 164-229 118-187 (321)
305 PRK06524 biotin carboxylase-li 27.8 4.4E+02 0.0095 25.1 8.7 120 105-253 90-215 (493)
306 KOG3040 Predicted sugar phosph 27.5 3.7E+02 0.0081 22.6 7.5 37 107-143 24-66 (262)
307 PRK09479 glpX fructose 1,6-bis 27.4 4.1E+02 0.0089 23.6 7.9 66 164-229 121-190 (319)
308 PRK09423 gldA glycerol dehydro 27.3 4.6E+02 0.0099 23.5 9.2 46 182-227 67-116 (366)
309 PF03332 PMM: Eukaryotic phosp 26.7 54 0.0012 27.4 2.4 42 112-153 2-45 (220)
310 PF09269 DUF1967: Domain of un 26.7 52 0.0011 21.9 1.9 23 187-209 44-66 (69)
311 PF11071 DUF2872: Protein of u 26.6 1.8E+02 0.0039 22.3 4.8 67 186-252 59-140 (141)
312 PF02601 Exonuc_VII_L: Exonucl 26.5 63 0.0014 28.4 3.0 116 120-260 15-164 (319)
313 PRK00885 phosphoribosylamine-- 26.1 5.1E+02 0.011 23.6 10.4 68 185-253 103-171 (420)
314 CHL00162 thiG thiamin biosynth 25.9 4.3E+02 0.0094 22.8 9.2 99 103-230 115-222 (267)
315 TIGR00237 xseA exodeoxyribonuc 25.6 3.5E+02 0.0076 25.1 7.8 111 119-254 129-270 (432)
316 TIGR00236 wecB UDP-N-acetylglu 25.3 3.9E+02 0.0083 23.6 7.9 83 122-229 32-120 (365)
317 COG0052 RpsB Ribosomal protein 25.2 2E+02 0.0044 24.6 5.5 53 200-252 157-220 (252)
318 PF02593 dTMP_synthase: Thymid 25.1 1.5E+02 0.0031 24.9 4.6 92 106-224 59-159 (217)
319 cd01615 CIDE_N CIDE_N domain, 24.9 47 0.001 22.9 1.4 16 22-37 41-56 (78)
320 COG0027 PurT Formate-dependent 24.6 2E+02 0.0042 25.8 5.4 76 187-263 117-193 (394)
321 TIGR03595 Obg_CgtA_exten Obg f 24.6 76 0.0017 21.1 2.4 23 187-209 44-66 (69)
322 PF13911 AhpC-TSA_2: AhpC/TSA 24.2 2.8E+02 0.006 19.9 5.9 32 112-143 6-37 (115)
323 cd06536 CIDE_N_ICAD CIDE_N dom 23.9 50 0.0011 22.9 1.4 16 22-37 43-58 (80)
324 PRK09864 putative peptidase; P 23.7 2E+02 0.0043 26.0 5.6 70 186-256 268-342 (356)
325 KOG2116 Protein involved in pl 23.7 40 0.00086 32.8 1.1 21 202-222 653-673 (738)
326 cd00886 MogA_MoaB MogA_MoaB fa 23.1 2.6E+02 0.0056 21.6 5.6 62 183-244 20-86 (152)
327 TIGR01369 CPSaseII_lrg carbamo 23.1 8.5E+02 0.018 25.6 10.7 68 186-253 671-738 (1050)
328 TIGR02471 sucr_syn_bact_C sucr 23.0 1.9E+02 0.0042 23.8 5.2 25 119-143 30-54 (236)
329 PRK01372 ddl D-alanine--D-alan 22.6 4.9E+02 0.011 22.3 10.6 68 185-252 99-166 (304)
330 TIGR01485 SPP_plant-cyano sucr 22.4 2.1E+02 0.0045 24.0 5.3 25 119-143 37-61 (249)
331 PRK10342 glycerate kinase I; P 21.9 6.2E+02 0.013 23.2 9.4 74 131-225 267-343 (381)
332 PRK13790 phosphoribosylamine-- 21.8 4.7E+02 0.01 23.6 7.7 67 186-252 69-135 (379)
333 COG5190 FCP1 TFIIF-interacting 21.7 1.7E+02 0.0038 26.8 4.8 80 107-212 253-334 (390)
334 TIGR02667 moaB_proteo molybden 21.7 2.7E+02 0.0059 21.9 5.4 61 184-244 23-88 (163)
335 cd06538 CIDE_N_FSP27 CIDE_N do 21.2 68 0.0015 22.2 1.6 16 22-37 40-55 (79)
336 PF09949 DUF2183: Uncharacteri 21.1 3.3E+02 0.0071 19.6 7.3 30 183-214 50-80 (100)
337 PRK12815 carB carbamoyl phosph 21.1 9E+02 0.02 25.5 10.4 66 185-251 671-737 (1068)
338 COG0378 HypB Ni2+-binding GTPa 21.1 2.2E+02 0.0047 23.5 4.8 64 182-245 24-91 (202)
339 PRK00286 xseA exodeoxyribonucl 21.0 4.8E+02 0.01 24.1 7.8 111 119-254 135-275 (438)
340 PRK14021 bifunctional shikimat 20.9 7.5E+02 0.016 23.7 10.0 35 193-227 263-303 (542)
341 cd00008 53EXOc 5'-3' exonuclea 20.8 19 0.0004 30.6 -1.5 35 188-222 157-195 (240)
342 PRK09482 flap endonuclease-lik 20.5 22 0.00048 30.5 -1.1 36 188-223 156-195 (256)
343 PF02017 CIDE-N: CIDE-N domain 20.4 70 0.0015 22.1 1.5 16 22-37 41-56 (78)
344 TIGR00200 cinA_nterm competenc 20.4 3.1E+02 0.0068 25.3 6.3 58 184-241 21-81 (413)
345 PLN02257 phosphoribosylamine-- 20.4 6.9E+02 0.015 23.1 10.2 67 185-252 103-170 (434)
346 PF08620 RPAP1_C: RPAP1-like, 20.2 39 0.00084 23.0 0.2 9 25-33 4-12 (73)
347 PRK02186 argininosuccinate lya 20.1 9.5E+02 0.021 24.6 10.6 68 185-253 108-176 (887)
348 PF06901 FrpC: RTX iron-regula 20.0 73 0.0016 26.1 1.8 13 22-34 59-71 (271)
No 1
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.97 E-value=4.2e-30 Score=206.17 Aligned_cols=220 Identities=60% Similarity=1.014 Sum_probs=206.4
Q ss_pred CccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHHHHhcCCCChHHHHHHHhcc
Q 024023 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGK 99 (274)
Q Consensus 20 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (274)
++++++||+|.|||+....+...+++++.+++.+++|++.+.+..++..+++.||.....+...+..++.++++++.++.
T Consensus 14 ~~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG~t~aGL~~~~~~~d~deY~~~V~~~ 93 (244)
T KOG3109|consen 14 NYKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYGLTMAGLKAVGYIFDADEYHRFVHGR 93 (244)
T ss_pred cceEEEEecccccccCchhHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHHHhhcc
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCChhHHHHHHhCCCc-EEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccc
Q 024023 100 LPYEKLKPDPVLRNLLLSMPQR-KIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR 178 (274)
Q Consensus 100 ~~~~~~~~~~~~~~~L~~l~~~-~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (274)
.++..++|.+.++++|-.|+.+ .+++||+...++...|+++|+.+||+.|++++...+. +-.
T Consensus 94 LPlq~LkPD~~LRnlLL~l~~r~k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np~-----------------~~~ 156 (244)
T KOG3109|consen 94 LPLQDLKPDPVLRNLLLSLKKRRKWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNPI-----------------EKT 156 (244)
T ss_pred CcHhhcCCCHHHHHHHHhCccccEEEecCCcHHHHHHHHHHhChHHhccceeEeeccCCC-----------------CCc
Confidence 9999999999999999999866 9999999999999999999999999999998854421 123
Q ss_pred cCCCCCHHHHHHHHHHhCCC-CCeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCCccccccCHhHHHHHHHHHHhhcc
Q 024023 179 ILCKPSLEAIETAIRIANVD-PKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEGEG 256 (274)
Q Consensus 179 ~~~kp~~~~~~~~l~~~g~~-~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~~~~~~~~ 256 (274)
..+||.+++++.+.+..|+. |.+++||+||.++|+.|++.|++++++.......++++++.++.+..+.++.+|+.+.
T Consensus 157 ~vcKP~~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~~~~~~~~d~~l~~ih~~k~a~p~l~~~~~ 235 (244)
T KOG3109|consen 157 VVCKPSEEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTVLVGREHKIKGVDYALEQIHNNKEALPELWEILE 235 (244)
T ss_pred eeecCCHHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHhccceeEEEEeeecccchHHHHHHhhchhhhchHHhhccc
Confidence 44699999999999999997 9999999999999999999999999999988889999999999999999999999865
No 2
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.96 E-value=2.7e-28 Score=204.07 Aligned_cols=199 Identities=17% Similarity=0.196 Sum_probs=149.1
Q ss_pred CccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHHHHhcCCCChHHHHHHHhc-
Q 024023 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHG- 98 (274)
Q Consensus 20 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 98 (274)
++++|+||+||||+|+...+..++.+ .+++++....... .+...+|.........-.+...+.+.+.+..
T Consensus 2 ~~~~viFD~DGTL~ds~~~~~~a~~~-----~~~~~~~~~~~~~----~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (214)
T PRK13288 2 KINTVLFDLDGTLINTNELIISSFLH-----TLKTYYPNQYKRE----DVLPFIGPSLHDTFSKIDESKVEEMITTYREF 72 (214)
T ss_pred CccEEEEeCCCcCccCHHHHHHHHHH-----HHHHhCCCCCCHH----HHHHHhCcCHHHHHHhcCHHHHHHHHHHHHHH
Confidence 57999999999999988877777775 4444443321111 2233345443322211111112222221111
Q ss_pred --cCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCccccccc
Q 024023 99 --KLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSF 173 (274)
Q Consensus 99 --~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~ 173 (274)
........++||+.++|+.| +.+++|+||+....+...++.+|+..+|+.++++++....
T Consensus 73 ~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~--------------- 137 (214)
T PRK13288 73 NHEHHDELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEHA--------------- 137 (214)
T ss_pred HHHhhhhhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCCC---------------
Confidence 11123567899999999988 4789999999999999999999999999999999988765
Q ss_pred CcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC------CCCccccccCHhHHHHH
Q 024023 174 SSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIKEA 247 (274)
Q Consensus 174 ~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~------~~~a~~~~~~l~~l~~~ 247 (274)
||+|+.+..+++++|++|+++++|||+.+|+.+|+++|+.++++.|+.. ...++++++++.++.++
T Consensus 138 --------Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l~~~ 209 (214)
T PRK13288 138 --------KPDPEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDKMSDLLAI 209 (214)
T ss_pred --------CCCcHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECCHHHHHHH
Confidence 9999999999999999999999999999999999999999999988753 34689999999999987
Q ss_pred HHH
Q 024023 248 IPE 250 (274)
Q Consensus 248 l~~ 250 (274)
+..
T Consensus 210 i~~ 212 (214)
T PRK13288 210 VGD 212 (214)
T ss_pred Hhh
Confidence 654
No 3
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.96 E-value=2.2e-27 Score=193.94 Aligned_cols=184 Identities=58% Similarity=0.961 Sum_probs=150.1
Q ss_pred cEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHHHHhcCCCChHHHHHHHhccCC
Q 024023 22 ECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLP 101 (274)
Q Consensus 22 k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (274)
.+|+||+||||+|+...+..++.+++.+...+++|++......+...++..+|.....+... .....+.+...+.....
T Consensus 1 ~~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~ 79 (184)
T TIGR01993 1 DVWFFDLDNTLYPHSAGIFLQIDRNITEFVAARLKLSEEEARVLRKDYYREYGTTLAGLMIL-HEIDADEYLRYVHGRLP 79 (184)
T ss_pred CeEEEeCCCCCCCCcccHHHHHHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHchHHHHHHHh-hCCCHHHHHHHHhccCC
Confidence 37999999999999889999888877777778889877655555555555566554444332 34455667776665444
Q ss_pred CCCCCCChhHHHHHHhCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCC
Q 024023 102 YEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 181 (274)
Q Consensus 102 ~~~~~~~~~~~~~L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (274)
...+.++||+.++|+.|+.+++|+||++...+...++.+|+..+|+.++++++.+.. ....
T Consensus 80 ~~~~~~~~g~~~~L~~L~~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~-------------------~~~~ 140 (184)
T TIGR01993 80 YEKLKPDPELRNLLLRLPGRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPD-------------------YLLP 140 (184)
T ss_pred HHhCCCCHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCc-------------------cCCC
Confidence 456789999999999999999999999999999999999999999999999887641 0012
Q ss_pred CCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEE
Q 024023 182 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 225 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v 225 (274)
||+|+++..+++++|++|+++++|||+..|+.+|+++|++++++
T Consensus 141 KP~p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 141 KPSPQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMKTVLV 184 (184)
T ss_pred CCCHHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence 99999999999999999999999999999999999999999875
No 4
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.95 E-value=1.9e-27 Score=199.81 Aligned_cols=199 Identities=22% Similarity=0.255 Sum_probs=152.5
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHHHH--hcCC------CChH
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKA--VGYE------FDND 90 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~------~~~~ 90 (274)
++++.|+||+||||+|+...+..++.. .++.++.+...... +....|......-. .+.. ...+
T Consensus 2 ~~~~~iiFDlDGTL~Ds~~~~~~~~~~-----~~~~~~~~~~~~~~----~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~ 72 (220)
T COG0546 2 MMIKAILFDLDGTLVDSAEDILRAFNA-----ALAELGLPPLDEEE----IRQLIGLGLDELIERLLGEADEEAAAELVE 72 (220)
T ss_pred CCCCEEEEeCCCccccChHHHHHHHHH-----HHHHcCCCCCCHHH----HHHHhcCCHHHHHHHHhccccchhHHHHHH
Confidence 568999999999999999998888764 77888887533332 22223333222111 0100 0112
Q ss_pred HHHHHHhccCCCC-CCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCC
Q 024023 91 EFHAFVHGKLPYE-KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTD 166 (274)
Q Consensus 91 ~~~~~~~~~~~~~-~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~ 166 (274)
.+...+....... ...++||+.++|..| |++++|+|+.+...+...++.+|+..+|+.+++.++....
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~~-------- 144 (220)
T COG0546 73 RLREEFLTAYAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPPP-------- 144 (220)
T ss_pred HHHHHHHHHHHhhccCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCCC--------
Confidence 2222222222111 257899999999888 4889999999999999999999999999999997766654
Q ss_pred cccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC------CCCccccccC
Q 024023 167 GIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNS 240 (274)
Q Consensus 167 ~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~------~~~a~~~~~~ 240 (274)
||+|..+..+++++|++|++++||||+.+|+.+|+++|+.++++.||+. ..++++++++
T Consensus 145 ---------------KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~ 209 (220)
T COG0546 145 ---------------KPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDS 209 (220)
T ss_pred ---------------CcCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECC
Confidence 9999999999999999988999999999999999999999999999863 5679999999
Q ss_pred HhHHHHHHH
Q 024023 241 IHNIKEAIP 249 (274)
Q Consensus 241 l~~l~~~l~ 249 (274)
+.+|...+.
T Consensus 210 ~~el~~~l~ 218 (220)
T COG0546 210 LAELLALLA 218 (220)
T ss_pred HHHHHHHHh
Confidence 999998764
No 5
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.95 E-value=2.7e-27 Score=202.37 Aligned_cols=194 Identities=24% Similarity=0.298 Sum_probs=144.2
Q ss_pred CCCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCC----CcchHHHHHHHHH-HHhcCcHHHHH-HhcC-CCC--
Q 024023 18 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHI----DESEVPRMCLELY-REHGTTMAGLK-AVGY-EFD-- 88 (274)
Q Consensus 18 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~-~~~-- 88 (274)
+.++++|+|||||||+|+...+..++.+ .++++|. +... . .+. ...|....... .... ...
T Consensus 19 ~~~~k~viFDlDGTLiDs~~~~~~a~~~-----~~~~~g~~~g~~~~~-~----~~~~~~~G~~~~~~~~~~~~~~~~~~ 88 (248)
T PLN02770 19 LAPLEAVLFDVDGTLCDSDPLHYYAFRE-----MLQEINFNGGVPITE-E----FFVENIAGKHNEDIALGLFPDDLERG 88 (248)
T ss_pred cCccCEEEEcCCCccCcCHHHHHHHHHH-----HHHHhccccCCCCCH-H----HHHHHcCCCCHHHHHHHHcCcchhhH
Confidence 4568999999999999998888887776 3444432 2211 1 111 11233222211 1111 000
Q ss_pred ---hHHHHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCC
Q 024023 89 ---NDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPA 162 (274)
Q Consensus 89 ---~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~ 162 (274)
...+...+... ......++||+.++|+.| +++++|+||+....+...++.+|+.++|+.+++++++...
T Consensus 89 ~~~~~~~~~~y~~~-~~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~~---- 163 (248)
T PLN02770 89 LKFTDDKEALFRKL-ASEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEHA---- 163 (248)
T ss_pred HHHHHHHHHHHHHH-HHhcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCCC----
Confidence 01112222221 124578899999999888 5889999999999999999999999999999999988775
Q ss_pred CCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-----CCCcccc
Q 024023 163 DNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHA 237 (274)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-----~~~a~~~ 237 (274)
||+|+.+..+++++|++|++|++|||+.+|+++|+++|+.++++.++.. ..+++++
T Consensus 164 -------------------KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~v 224 (248)
T PLN02770 164 -------------------KPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFL 224 (248)
T ss_pred -------------------CCChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEE
Confidence 9999999999999999999999999999999999999999999987653 3579999
Q ss_pred ccCHhHHH
Q 024023 238 LNSIHNIK 245 (274)
Q Consensus 238 ~~~l~~l~ 245 (274)
++++.++.
T Consensus 225 i~~~~e~~ 232 (248)
T PLN02770 225 IKDYEDPK 232 (248)
T ss_pred eccchhhH
Confidence 99999944
No 6
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.95 E-value=3.1e-27 Score=199.66 Aligned_cols=196 Identities=20% Similarity=0.151 Sum_probs=147.1
Q ss_pred CccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHHH-HhcCCCCh-------HH
Q 024023 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLK-AVGYEFDN-------DE 91 (274)
Q Consensus 20 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-------~~ 91 (274)
|+|+|+||+||||+|+...+..++.. .++++|.+...... .....|....... ........ +.
T Consensus 11 ~~k~viFD~DGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (229)
T PRK13226 11 FPRAVLFDLDGTLLDSAPDMLATVNA-----MLAARGRAPITLAQ----LRPVVSKGARAMLAVAFPELDAAARDALIPE 81 (229)
T ss_pred cCCEEEEcCcCccccCHHHHHHHHHH-----HHHHCCCCCCCHHH----HHHHhhhHHHHHHHHHhccCChHHHHHHHHH
Confidence 56899999999999988888777764 66677765332222 1222232222211 11111111 12
Q ss_pred HHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcc
Q 024023 92 FHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGI 168 (274)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~ 168 (274)
+.+.+.... .....++||+.++|+.| +.+++|+||++.......++.+|+..+|+.++++++.+..
T Consensus 82 ~~~~~~~~~-~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~---------- 150 (229)
T PRK13226 82 FLQRYEALI-GTQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAER---------- 150 (229)
T ss_pred HHHHHHHhh-hhcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCCCC----------
Confidence 223332222 23468899999999888 4789999999999999999999999999999998877654
Q ss_pred cccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-------CCCccccccCH
Q 024023 169 ENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-------VPPADHALNSI 241 (274)
Q Consensus 169 ~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-------~~~a~~~~~~l 241 (274)
||+|+.+..+++++|++|++|++|||+.+|+.+|+++|+.++++.++.. ..+++++++++
T Consensus 151 -------------KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~ 217 (229)
T PRK13226 151 -------------KPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQP 217 (229)
T ss_pred -------------CCCHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCCH
Confidence 9999999999999999999999999999999999999999999987763 24699999999
Q ss_pred hHHHHHH
Q 024023 242 HNIKEAI 248 (274)
Q Consensus 242 ~~l~~~l 248 (274)
.+|.+.+
T Consensus 218 ~el~~~~ 224 (229)
T PRK13226 218 QLLWNPA 224 (229)
T ss_pred HHHHHHh
Confidence 9998765
No 7
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.95 E-value=9.8e-27 Score=201.04 Aligned_cols=204 Identities=14% Similarity=0.064 Sum_probs=147.7
Q ss_pred CCCccEEEEecCCCccCCchh-HHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHH---------------HHH
Q 024023 18 AANYECLLFDLDDTLYPLSTG-FNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA---------------GLK 81 (274)
Q Consensus 18 ~~~~k~viFDlDGTL~d~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------------~~~ 81 (274)
|+++|+|+||+||||+|+... +..++.+ .++.+|.+... . .....+|.... ...
T Consensus 1 ~~~~k~vIFDlDGTLiDs~~~~~~~a~~~-----~~~~~g~~~~~-~----~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 70 (267)
T PRK13478 1 MMKIQAVIFDWAGTTVDFGSFAPTQAFVE-----AFAQFGVEITL-E----EARGPMGLGKWDHIRALLKMPRVAARWQA 70 (267)
T ss_pred CCceEEEEEcCCCCeecCCCccHHHHHHH-----HHHHcCCCCCH-H----HHHHhcCCCHHHHHHHHHhcHHHHHHHHH
Confidence 457899999999999997543 2445543 44556665322 1 11222222211 011
Q ss_pred HhcCCCChHHHH-------HHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCcc-ceeE
Q 024023 82 AVGYEFDNDEFH-------AFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCF-EGII 150 (274)
Q Consensus 82 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~f-d~i~ 150 (274)
..+.....+.+. +.+.... .....++||+.++|+.| +++++|+||+....+...++.+++.++| +.++
T Consensus 71 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~ 149 (267)
T PRK13478 71 VFGRLPTEADVDALYAAFEPLQIAKL-ADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVV 149 (267)
T ss_pred HhCCCCCHHHHHHHHHHHHHHHHHHH-hhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEE
Confidence 122222222221 1111111 24568899999999988 4889999999999999999999988875 8899
Q ss_pred ecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCC-CCeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 151 CFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVD-PKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~-~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
+++++... ||+|+.+..+++++|+. +++|++|||+.+|+.+|+++|+.++++.++.
T Consensus 150 ~~~~~~~~-----------------------KP~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~ 206 (267)
T PRK13478 150 TTDDVPAG-----------------------RPYPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSG 206 (267)
T ss_pred cCCcCCCC-----------------------CCChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCc
Confidence 99887764 99999999999999996 6999999999999999999999999998875
Q ss_pred C-----------------------------CCCccccccCHhHHHHHHHHHHhhc
Q 024023 230 P-----------------------------VPPADHALNSIHNIKEAIPEIWEGE 255 (274)
Q Consensus 230 ~-----------------------------~~~a~~~~~~l~~l~~~l~~~~~~~ 255 (274)
. ..+++++++++.+|.+.+..+...+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~vi~~~~~l~~~l~~~~~~~ 261 (267)
T PRK13478 207 NELGLSEEEYQALSAAELAARRERARARLRAAGAHYVIDTIADLPAVIADIEARL 261 (267)
T ss_pred ccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCCCeehhhHHHHHHHHHHHHHHH
Confidence 3 4579999999999999887665543
No 8
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.95 E-value=2e-26 Score=193.42 Aligned_cols=195 Identities=16% Similarity=0.203 Sum_probs=145.6
Q ss_pred ccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHH-HhcCcHHHH-HH----hcCCC-ChHH--
Q 024023 21 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYR-EHGTTMAGL-KA----VGYEF-DNDE-- 91 (274)
Q Consensus 21 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~-~~----~~~~~-~~~~-- 91 (274)
+|+|+||+||||+|+.+.+..++.+ +.++.|.+..... ... ..|...... .. .+... ..+.
T Consensus 1 ~k~iiFD~DGTL~ds~~~~~~~~~~-----~~~~~g~~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGLVYRALRQ-----AVTAAGLSPTPEE-----VQSAWMGQSKIEAIRALLALDGADEAEAQAAF 70 (220)
T ss_pred CcEEEEecCCCeeccCchHHHHHHH-----HHHHcCCCCCHHH-----HHHhhcCCCHHHHHHHHHhccCCCHHHHHHHH
Confidence 5799999999999999888888775 5556677543211 111 223332221 11 12211 0111
Q ss_pred --HHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCC--CccceeEecccCCCCCCCCCC
Q 024023 92 --FHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLE--DCFEGIICFETINPRLQPADN 164 (274)
Q Consensus 92 --~~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~--~~fd~i~~~~~~~~~~~~~~~ 164 (274)
+.+.+...+......++||+.++|+.| +++++|+||+....+...++.+|+. .+|+.++++++....
T Consensus 71 ~~~~~~~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~------ 144 (220)
T TIGR03351 71 ADFEERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAG------ 144 (220)
T ss_pred HHHHHHHHHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCC------
Confidence 122222212223468999999999998 4789999999999999999999998 999999999987764
Q ss_pred CCcccccccCcccccCCCCCHHHHHHHHHHhCCC-CCeEEEEcCChhcHHHHHHcCCeE-EEECCCCC------CCCccc
Q 024023 165 TDGIENNSFSSNQRILCKPSLEAIETAIRIANVD-PKKTIFFDDSARNIASAKAAGLHT-VIVGSSVP------VPPADH 236 (274)
Q Consensus 165 ~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~-~~~~i~VGDs~~Di~~a~~~G~~~-v~v~~~~~------~~~a~~ 236 (274)
||+|+++..+++++|+. |++|++|||+.+|+.+|+++|+.+ +++.++.. ...+++
T Consensus 145 -----------------KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~ 207 (220)
T TIGR03351 145 -----------------RPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTH 207 (220)
T ss_pred -----------------CCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCce
Confidence 99999999999999997 799999999999999999999999 88877653 456899
Q ss_pred cccCHhHHHHHH
Q 024023 237 ALNSIHNIKEAI 248 (274)
Q Consensus 237 ~~~~l~~l~~~l 248 (274)
+++++.+|..++
T Consensus 208 ~i~~~~~l~~~~ 219 (220)
T TIGR03351 208 VLDSVADLPALL 219 (220)
T ss_pred eecCHHHHHHhh
Confidence 999999987643
No 9
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.95 E-value=7.9e-27 Score=196.07 Aligned_cols=196 Identities=20% Similarity=0.238 Sum_probs=143.0
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHH-hcCcHH-----HHHHhcCCCChHHH
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYRE-HGTTMA-----GLKAVGYEFDNDEF 92 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~~ 92 (274)
+++++|+||+||||+|+...+..++.+ ..+.+|.+... .. .... .|.... .+...+.....+.+
T Consensus 2 ~~~~~viFD~DGTL~d~~~~~~~a~~~-----~~~~~g~~~~~-~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 71 (221)
T PRK10563 2 SQIEAVFFDCDGTLVDSEVICSRAYVT-----MFAEFGITLSL-EE----VFKRFKGVKLYEIIDIISKEHGVTLAKAEL 71 (221)
T ss_pred CCCCEEEECCCCCCCCChHHHHHHHHH-----HHHHcCCCCCH-HH----HHHHhcCCCHHHHHHHHHHHhCCCCCHHHH
Confidence 468999999999999988777676654 55567765332 11 1122 222211 12233444444444
Q ss_pred HHHHhccC---CCCCCCCChhHHHHHHhCCCcEEEEeCCChHHHHHHHHHcCCCCccc-eeEecccCCCCCCCCCCCCcc
Q 024023 93 HAFVHGKL---PYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFE-GIICFETINPRLQPADNTDGI 168 (274)
Q Consensus 93 ~~~~~~~~---~~~~~~~~~~~~~~L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd-~i~~~~~~~~~~~~~~~~~~~ 168 (274)
...+.... ......++||+.++|+.|+.+++|+||++...+...++.+|+.++|+ .++++++++..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~gv~~~L~~L~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~~---------- 141 (221)
T PRK10563 72 EPVYRAEVARLFDSELEPIAGANALLESITVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQRW---------- 141 (221)
T ss_pred HHHHHHHHHHHHHccCCcCCCHHHHHHHcCCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCCC----------
Confidence 43322211 12457889999999999999999999999999999999999999996 67788777765
Q ss_pred cccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC----CCCccccccCHhHH
Q 024023 169 ENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNI 244 (274)
Q Consensus 169 ~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~----~~~a~~~~~~l~~l 244 (274)
||+|+.+..+++++|++|++|++|||+.+|+++|+++|++++++.++.. ...++.++.++.+|
T Consensus 142 -------------KP~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~~~~~~~~~~~~~~~~~~~~~~~~l 208 (221)
T PRK10563 142 -------------KPDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFYFCADPHNKPIDHPLVTTFTDLAQL 208 (221)
T ss_pred -------------CCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEEECCCCCCcchhhhhhHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998854332 22344556666666
Q ss_pred HHH
Q 024023 245 KEA 247 (274)
Q Consensus 245 ~~~ 247 (274)
.+.
T Consensus 209 ~~~ 211 (221)
T PRK10563 209 PEL 211 (221)
T ss_pred HHH
Confidence 653
No 10
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.95 E-value=1.9e-26 Score=197.75 Aligned_cols=123 Identities=14% Similarity=0.081 Sum_probs=110.7
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCcc-ceeEecccCCCCCCCCCCCCcccccccCcccc
Q 024023 103 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCF-EGIICFETINPRLQPADNTDGIENNSFSSNQR 178 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~f-d~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (274)
....++||+.++|+.| +++++|+||++...+..+++.+|+..+| +.+++++++...
T Consensus 96 ~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~-------------------- 155 (253)
T TIGR01422 96 EYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPAG-------------------- 155 (253)
T ss_pred hcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCCC--------------------
Confidence 4578999999999988 4889999999999999999999999986 899999988765
Q ss_pred cCCCCCHHHHHHHHHHhCCC-CCeEEEEcCChhcHHHHHHcCCeEEEECCCCC---------------------------
Q 024023 179 ILCKPSLEAIETAIRIANVD-PKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--------------------------- 230 (274)
Q Consensus 179 ~~~kp~~~~~~~~l~~~g~~-~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--------------------------- 230 (274)
||+|+.+..+++++|+. |++|++|||+.+|+.+|+++|+.++++.+|..
T Consensus 156 ---KP~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (253)
T TIGR01422 156 ---RPAPWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTVGLILSSNELGLSEEEYRALDPAELEARRAEATAR 232 (253)
T ss_pred ---CCCHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHHHHH
Confidence 99999999999999995 99999999999999999999999999988753
Q ss_pred --CCCccccccCHhHHHHHH
Q 024023 231 --VPPADHALNSIHNIKEAI 248 (274)
Q Consensus 231 --~~~a~~~~~~l~~l~~~l 248 (274)
..+++++++++.+|.++|
T Consensus 233 l~~~~~~~v~~~~~el~~~~ 252 (253)
T TIGR01422 233 LKAAGAHYVIDTLAELPAVI 252 (253)
T ss_pred HHhcCCCEehhcHHHHHHhh
Confidence 357999999999987654
No 11
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.94 E-value=3.6e-26 Score=191.94 Aligned_cols=198 Identities=26% Similarity=0.359 Sum_probs=139.1
Q ss_pred ccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcc--hHHHHHHHHHHHhcCc-----HHHHHHhcCCCChHHHH
Q 024023 21 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDES--EVPRMCLELYREHGTT-----MAGLKAVGYEFDNDEFH 93 (274)
Q Consensus 21 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 93 (274)
+++|+||+||||+|+...+..++..... .....|.+.. ............++.. .............+...
T Consensus 2 ~~~viFDlDGTL~ds~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (221)
T TIGR02253 2 IKAIFFDLDDTLIDTSGLAEKARRNAIE--VLIEAGLNVDFEEAYEELLKLIKEYGSNYPTHFDYLIRRLWEEYNPKLVA 79 (221)
T ss_pred ceEEEEeCCCCCcCCCCccCHHHHHHHH--HHHHCCCcCCHHHHHHHHHHHHHHhccccCcchHHHHHHHhhhcCHHHHH
Confidence 6899999999999988877666543221 2334444422 1111111111222211 11111111111111111
Q ss_pred H---HHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCc
Q 024023 94 A---FVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDG 167 (274)
Q Consensus 94 ~---~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~ 167 (274)
+ .+.. .....+.++||+.++|+.| |.+++|+||+....+...++.+|+..+|+.++++++.+..
T Consensus 80 ~~~~~~~~-~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~--------- 149 (221)
T TIGR02253 80 AFVYAYHK-LKFAYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGVE--------- 149 (221)
T ss_pred HHHHHHHH-HHHHhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCCC---------
Confidence 1 1111 1124568999999999988 4789999999999999999999999999999999988875
Q ss_pred ccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCC-------CCCcccccc
Q 024023 168 IENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP-------VPPADHALN 239 (274)
Q Consensus 168 ~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~-------~~~a~~~~~ 239 (274)
||+|+.+..+++++|++++++++|||+. +|+.+|+++|+.++++.++.. ...+++++.
T Consensus 150 --------------KP~~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~~~~i~ 215 (221)
T TIGR02253 150 --------------KPHPKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQGKSSKMEDDVYPYPDYEIS 215 (221)
T ss_pred --------------CCCHHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEECCCCCcccccccccCCCeeeC
Confidence 9999999999999999999999999998 899999999999999987653 235788888
Q ss_pred CHhHH
Q 024023 240 SIHNI 244 (274)
Q Consensus 240 ~l~~l 244 (274)
++.+|
T Consensus 216 ~~~el 220 (221)
T TIGR02253 216 SLREL 220 (221)
T ss_pred cHHhh
Confidence 88776
No 12
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.94 E-value=3.5e-26 Score=190.85 Aligned_cols=191 Identities=25% Similarity=0.288 Sum_probs=143.2
Q ss_pred EEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHH-----HHHhcCCCChH---H----
Q 024023 24 LLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAG-----LKAVGYEFDND---E---- 91 (274)
Q Consensus 24 viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~---~---- 91 (274)
|+||+||||+|+...+..++.. ..++.|.+...... +....|..... +...+.....+ .
T Consensus 1 viFD~DGTL~Ds~~~~~~~~~~-----~~~~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (213)
T TIGR01449 1 VLFDLDGTLVDSAPDIAAAVNM-----ALAALGLPPATLAR----VIGFIGNGVPVLMERVLAWAGQEPDAQRVAELRKL 71 (213)
T ss_pred CeecCCCccccCHHHHHHHHHH-----HHHHCCCCCCCHHH----HHHHhcccHHHHHHHHhhccccccChHHHHHHHHH
Confidence 6899999999988877776664 55667765322221 22223333211 11112222221 1
Q ss_pred HHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcc
Q 024023 92 FHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGI 168 (274)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~ 168 (274)
+...+.... .....++||+.++|+.| |.+++|+|+++...+...++++|+..+|+.++++++.+..
T Consensus 72 ~~~~~~~~~-~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~---------- 140 (213)
T TIGR01449 72 FDRHYEEVA-GELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQR---------- 140 (213)
T ss_pred HHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCCC----------
Confidence 122222211 23468899999999988 4789999999999999999999999999999999887764
Q ss_pred cccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC------CCCccccccCHh
Q 024023 169 ENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIH 242 (274)
Q Consensus 169 ~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~------~~~a~~~~~~l~ 242 (274)
||+|+.+..+++++|++|+++++|||+.+|+.+|+++|+.++++.++.. ..+++++++++.
T Consensus 141 -------------Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~ 207 (213)
T TIGR01449 141 -------------KPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDSLN 207 (213)
T ss_pred -------------CCChHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCCHH
Confidence 9999999999999999999999999999999999999999999987653 357899999999
Q ss_pred HHHHH
Q 024023 243 NIKEA 247 (274)
Q Consensus 243 ~l~~~ 247 (274)
+|..+
T Consensus 208 ~l~~~ 212 (213)
T TIGR01449 208 ELPPL 212 (213)
T ss_pred HHHhh
Confidence 98764
No 13
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.94 E-value=3.4e-26 Score=192.43 Aligned_cols=195 Identities=21% Similarity=0.199 Sum_probs=146.3
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHH-----HHhcC-CCChHHH
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL-----KAVGY-EFDNDEF 92 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~ 92 (274)
.++|+|+||+||||+|+...+..++.+ +++..|.+...... +....|...... ...+. ....+.+
T Consensus 5 ~~~k~iiFD~DGTL~d~~~~~~~a~~~-----~~~~~g~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 75 (222)
T PRK10826 5 RQILAAIFDMDGLLIDSEPLWDRAELD-----VMASLGVDISRREE----LPDTLGLRIDQVVDLWYARQPWNGPSRQEV 75 (222)
T ss_pred ccCcEEEEcCCCCCCcCHHHHHHHHHH-----HHHHCCCCCCHHHH----HHHhhCCCHHHHHHHHHHhcCCCCCCHHHH
Confidence 358999999999999988888777764 56677765432121 122223222111 11111 1112222
Q ss_pred H----HHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCC
Q 024023 93 H----AFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNT 165 (274)
Q Consensus 93 ~----~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~ 165 (274)
. +.+.... .....++||+.++|+.| |.+++|+|++....+...++.+|+..+|+.++++++++..
T Consensus 76 ~~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~------- 147 (222)
T PRK10826 76 VQRIIARVISLI-EETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPYS------- 147 (222)
T ss_pred HHHHHHHHHHHH-hcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCCCC-------
Confidence 1 1111111 24568999999999988 4889999999999999999999999999999999887764
Q ss_pred CcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-----CCCccccccC
Q 024023 166 DGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHALNS 240 (274)
Q Consensus 166 ~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-----~~~a~~~~~~ 240 (274)
||+|+.+..+++++|++|++|++|||+.+|+++|+++|++++++..+.. ...+++++.+
T Consensus 148 ----------------Kp~~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~ 211 (222)
T PRK10826 148 ----------------KPHPEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLES 211 (222)
T ss_pred ----------------CCCHHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccC
Confidence 9999999999999999999999999999999999999999999987653 2368899999
Q ss_pred HhHHHH
Q 024023 241 IHNIKE 246 (274)
Q Consensus 241 l~~l~~ 246 (274)
+.+|..
T Consensus 212 ~~dl~~ 217 (222)
T PRK10826 212 LTELTA 217 (222)
T ss_pred HHHHhh
Confidence 999864
No 14
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.94 E-value=3.2e-26 Score=196.45 Aligned_cols=212 Identities=14% Similarity=0.205 Sum_probs=152.5
Q ss_pred ccccccccccCCCCCccEEEEecCCCccCCchhHH-HHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHH-HHh
Q 024023 6 PALKMDTMGRTTAANYECLLFDLDDTLYPLSTGFN-LACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL-KAV 83 (274)
Q Consensus 6 ~~~~~~~~~~~~~~~~k~viFDlDGTL~d~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 83 (274)
|.++-+..+ ..+|+|+|||||||+||...+. .++.+ +++++|++..... ......|...... ..+
T Consensus 13 ~~~~~~~~~----~~~k~vIFDlDGTLvDS~~~~~~~a~~~-----~~~~~G~~~~~~e----~~~~~~G~~~~~~~~~l 79 (260)
T PLN03243 13 PLLRQHRLG----CGWLGVVLEWEGVIVEDDSELERKAWRA-----LAEEEGKRPPPAF----LLKRAEGMKNEQAISEV 79 (260)
T ss_pred HHHHHHHhc----CCceEEEEeCCCceeCCchHHHHHHHHH-----HHHHcCCCCCHHH----HHHHhcCCCHHHHHHHH
Confidence 444444444 3589999999999999865444 45553 6667777643211 1122334433221 111
Q ss_pred -cCCCChH---HH----HHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEec
Q 024023 84 -GYEFDND---EF----HAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICF 152 (274)
Q Consensus 84 -~~~~~~~---~~----~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~ 152 (274)
......+ .+ ...+. ........++||+.++|+.| |++++|+||++...+...++.+|+.++|+.++++
T Consensus 80 ~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~ 158 (260)
T PLN03243 80 LCWSRDFLQMKRLAIRKEDLYE-YMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAA 158 (260)
T ss_pred hccCCCHHHHHHHHHHHHHHHH-HHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEec
Confidence 1111111 11 11111 11123467899999999988 4899999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--
Q 024023 153 ETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-- 230 (274)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-- 230 (274)
+++... ||+|+.+..+++++|++|++|++|||+.+|+.+|+++|+.++++.....
T Consensus 159 ~d~~~~-----------------------KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~ 215 (260)
T PLN03243 159 EDVYRG-----------------------KPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVY 215 (260)
T ss_pred ccCCCC-----------------------CCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchh
Confidence 988765 9999999999999999999999999999999999999999999863221
Q ss_pred -CCCccccccCHhHHHHHHHHHHhh
Q 024023 231 -VPPADHALNSIHNIKEAIPEIWEG 254 (274)
Q Consensus 231 -~~~a~~~~~~l~~l~~~l~~~~~~ 254 (274)
...++++++++.+|...+..-++.
T Consensus 216 ~l~~ad~vi~~~~el~~~~~~~~~~ 240 (260)
T PLN03243 216 ELSAGDLVVRRLDDLSVVDLKNLSD 240 (260)
T ss_pred hhccCCEEeCCHHHHHHHHHhhhhc
Confidence 345899999999998765555554
No 15
>PRK11587 putative phosphatase; Provisional
Probab=99.94 E-value=5.6e-26 Score=190.60 Aligned_cols=192 Identities=21% Similarity=0.218 Sum_probs=141.1
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHH-HHHhcCCCChHHHHHHHh
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAG-LKAVGYEFDNDEFHAFVH 97 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 97 (274)
|++|+|+||+||||+|+...+..++.+ .++++|++..... ....|..... +..+......+.+.+.+.
T Consensus 1 M~~k~viFDlDGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 69 (218)
T PRK11587 1 MRCKGFLFDLDGTLVDSLPAVERAWSN-----WADRHGIAPDEVL------NFIHGKQAITSLRHFMAGASEAEIQAEFT 69 (218)
T ss_pred CCCCEEEEcCCCCcCcCHHHHHHHHHH-----HHHHcCCCHHHHH------HHHcCCCHHHHHHHHhccCCcHHHHHHHH
Confidence 357999999999999988888777775 6667777532111 1112332221 222211122222222111
Q ss_pred -----ccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCccc
Q 024023 98 -----GKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIE 169 (274)
Q Consensus 98 -----~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~ 169 (274)
.........++||+.++|+.| +.+++|+||++.......++..++ .+|+.+++++++...
T Consensus 70 ~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l-~~~~~i~~~~~~~~~----------- 137 (218)
T PRK11587 70 RLEQIEATDTEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL-PAPEVFVTAERVKRG----------- 137 (218)
T ss_pred HHHHHHHhhhcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC-CCccEEEEHHHhcCC-----------
Confidence 111124678999999999888 488999999998888888888888 457888888877664
Q ss_pred ccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC---CCCccccccCHhHHH
Q 024023 170 NNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP---VPPADHALNSIHNIK 245 (274)
Q Consensus 170 ~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~---~~~a~~~~~~l~~l~ 245 (274)
||+|+.+..+++++|+.|++|++|||+.+|+++|+++|+.++++.++.. ...++++++++.+|.
T Consensus 138 ------------KP~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~el~ 204 (218)
T PRK11587 138 ------------KPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLHSLEQLT 204 (218)
T ss_pred ------------CCCcHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEecchhhee
Confidence 9999999999999999999999999999999999999999999987653 346889999998875
No 16
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.94 E-value=9.4e-26 Score=200.65 Aligned_cols=202 Identities=15% Similarity=0.207 Sum_probs=148.2
Q ss_pred CccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHH-HHh-cCCCCh---HHH--
Q 024023 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL-KAV-GYEFDN---DEF-- 92 (274)
Q Consensus 20 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~---~~~-- 92 (274)
..++|||||||||+|+...+....+. .+.++.|.+..... ......|...... ..+ ...... +.+
T Consensus 130 ~~~~VIFDlDGTLIDS~~~i~~~a~~----~l~~e~G~~~~~~e----~~~~~~G~~~~~~l~~ll~~~~~~~~~e~l~~ 201 (381)
T PLN02575 130 GWLGAIFEWEGVIIEDNPDLENQAWL----TLAQEEGKSPPPAF----ILRRVEGMKNEQAISEVLCWSRDPAELRRMAT 201 (381)
T ss_pred CCCEEEEcCcCcceeCHHHHHHHHHH----HHHHHcCCCCCHHH----HHHHhcCCCHHHHHHHHhhccCCHHHHHHHHH
Confidence 57899999999999988755543332 25566777643211 1223344443322 111 111111 111
Q ss_pred --HHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCc
Q 024023 93 --HAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDG 167 (274)
Q Consensus 93 --~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~ 167 (274)
.+.+.... .....++||+.++|+.| |++++|+|++....+...++.+|+..+|+.+++++++...
T Consensus 202 ~~~~~y~~~~-~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~~--------- 271 (381)
T PLN02575 202 RKEEIYQALQ-GGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYRG--------- 271 (381)
T ss_pred HHHHHHHHHh-ccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCCCC---------
Confidence 22222211 23467899999999998 5889999999999999999999999999999999988764
Q ss_pred ccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC---CCCccccccCHhHH
Q 024023 168 IENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP---VPPADHALNSIHNI 244 (274)
Q Consensus 168 ~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~---~~~a~~~~~~l~~l 244 (274)
||+|+++..+++++|++|++|++|||+.+|+++|+++|+.+|++.++.. ...++++++++.+|
T Consensus 272 --------------KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~s~~EL 337 (381)
T PLN02575 272 --------------KPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVRRLDEL 337 (381)
T ss_pred --------------CCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEECCHHHH
Confidence 9999999999999999999999999999999999999999999987553 33588999999999
Q ss_pred HH-HHHHHHh
Q 024023 245 KE-AIPEIWE 253 (274)
Q Consensus 245 ~~-~l~~~~~ 253 (274)
.. .++.+..
T Consensus 338 ~~~~l~~l~~ 347 (381)
T PLN02575 338 SIVDLKNLAD 347 (381)
T ss_pred HHHHHhhhhh
Confidence 53 3444443
No 17
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.94 E-value=1.6e-25 Score=185.98 Aligned_cols=192 Identities=21% Similarity=0.264 Sum_probs=144.4
Q ss_pred EEEecCCCccCCchhHHHHHHHHHHHHHHhh-cCCCcchHHHHHHHHHHHhcCcHHH-HHHhcCCCC-hHHHHHHHhccC
Q 024023 24 LLFDLDDTLYPLSTGFNLACRRNIEEFMSQH-LHIDESEVPRMCLELYREHGTTMAG-LKAVGYEFD-NDEFHAFVHGKL 100 (274)
Q Consensus 24 viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~ 100 (274)
|+|||||||+|+.+.+..++.++ .++ .|.+..... .+....|..... +...+.+.. .+.+......
T Consensus 1 iiFDlDGTL~Ds~~~~~~~~~~~-----~~~~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-- 69 (205)
T TIGR01454 1 VVFDLDGVLVDSFAVMREAFAIA-----YREVVGDGPAPFE----EYRRHLGRYFPDIMRIMGLPLEMEEPFVRESYR-- 69 (205)
T ss_pred CeecCcCccccCHHHHHHHHHHH-----HHHhcCCCCCCHH----HHHHHhCccHHHHHHHcCCCHHHHHHHHHHHHH--
Confidence 68999999999988888888753 333 344322211 222233333322 222332211 1112111221
Q ss_pred CCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCccc
Q 024023 101 PYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQ 177 (274)
Q Consensus 101 ~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (274)
....+.++||+.++|+.| +.+++|+||++...+...++.+|+..+|+.++++++....
T Consensus 70 ~~~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~------------------- 130 (205)
T TIGR01454 70 LAGEVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPRP------------------- 130 (205)
T ss_pred hhcccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCCCC-------------------
Confidence 124678999999999988 4789999999999999999999999999999999887654
Q ss_pred ccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC------CCCccccccCHhHHHHHHH
Q 024023 178 RILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIKEAIP 249 (274)
Q Consensus 178 ~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~------~~~a~~~~~~l~~l~~~l~ 249 (274)
||+++.+..+++++|++++++++|||+.+|+.+|+++|+.++++.||.. ..+++++++++.+|..+++
T Consensus 131 ----KP~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l~~~~~ 204 (205)
T TIGR01454 131 ----KPAPDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRKPQSLLALCR 204 (205)
T ss_pred ----CCChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999988864 4568999999999987654
No 18
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.94 E-value=3.8e-25 Score=186.19 Aligned_cols=202 Identities=18% Similarity=0.230 Sum_probs=140.5
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCc-----HHH-HHHhcCCCChHHH
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTT-----MAG-LKAVGYEFDNDEF 92 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~ 92 (274)
.++|+|+|||||||+|+... ...+.+...+.+.+..|.+...........+...+.. ... ....+. ....+
T Consensus 8 ~~~k~vIFDlDGTL~d~~~~-~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 84 (224)
T PRK14988 8 QDVDTVLLDMDGTLLDLAFD-NYFWQKLVPETLGAQRGISPQEAQEYIRQEYHAVQHTLNWYCLDYWSERLGL--DICAM 84 (224)
T ss_pred ccCCEEEEcCCCCccchhhh-chHHHhhHHHHHHHHhCcCHHHHHHHHHHHHHHHcCccceecHHHHHHHhCC--CHHHH
Confidence 35789999999999995311 1122222333455677876543222211111111110 000 111111 11111
Q ss_pred HHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCccc
Q 024023 93 HAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIE 169 (274)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~ 169 (274)
... ......++||+.++|+.| |.+++|+||+....+...++.+|+..+|+.++++++++..
T Consensus 85 ~~~-----~~~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~~----------- 148 (224)
T PRK14988 85 TTE-----QGPRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYP----------- 148 (224)
T ss_pred HHH-----HhccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCCCC-----------
Confidence 111 124578899999999988 4789999999999999999999999999999999988865
Q ss_pred ccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeE-EEECCCCC--CCCccccccCHhHHHH
Q 024023 170 NNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT-VIVGSSVP--VPPADHALNSIHNIKE 246 (274)
Q Consensus 170 ~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~-v~v~~~~~--~~~a~~~~~~l~~l~~ 246 (274)
||+|+.+..+++++|++|++|++|||+.+|+++|+++|+++ +++.++.. ...+.....++.++.+
T Consensus 149 ------------KP~p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 216 (224)
T PRK14988 149 ------------KEDQRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTNPDSGIAEKQYQRHPSLNDYRR 216 (224)
T ss_pred ------------CCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeCCCCCccchhccCCCcHHHHHH
Confidence 99999999999999999999999999999999999999985 56766554 3455566788888887
Q ss_pred HHHHH
Q 024023 247 AIPEI 251 (274)
Q Consensus 247 ~l~~~ 251 (274)
.+..+
T Consensus 217 ~~~~l 221 (224)
T PRK14988 217 LIPSL 221 (224)
T ss_pred Hhhhh
Confidence 77665
No 19
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.94 E-value=1.3e-25 Score=194.19 Aligned_cols=202 Identities=20% Similarity=0.258 Sum_probs=150.2
Q ss_pred CCCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHH-HH-hc-----CCCCh-
Q 024023 18 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL-KA-VG-----YEFDN- 89 (274)
Q Consensus 18 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~-----~~~~~- 89 (274)
..++|+|+||+||||+|+...+..++.. +.+..|.+...... +....|.....+ .. +. ...+.
T Consensus 10 ~~~~k~viFDlDGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~~----~~~~~g~~~~~~~~~~l~~~~~~~~~~~~ 80 (272)
T PRK13223 10 GRLPRLVMFDLDGTLVDSVPDLAAAVDR-----MLLELGRPPAGLEA----VRHWVGNGAPVLVRRALAGSIDHDGVDDE 80 (272)
T ss_pred CccCCEEEEcCCCccccCHHHHHHHHHH-----HHHHcCCCCCCHHH----HHHHhChhHHHHHHHHhcccccccCCCHH
Confidence 3568999999999999988887777764 66777776433222 122223222211 11 00 01111
Q ss_pred --HHHHHHHhccC--CCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCC
Q 024023 90 --DEFHAFVHGKL--PYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPA 162 (274)
Q Consensus 90 --~~~~~~~~~~~--~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~ 162 (274)
+.+.+.+.+.+ ......++||+.++|+.| +.+++|+||++...+...++.+|+..+|+.++++++.+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~~---- 156 (272)
T PRK13223 81 LAEQALALFMEAYADSHELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQK---- 156 (272)
T ss_pred HHHHHHHHHHHHHHhcCcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCCC----
Confidence 12222222111 123457899999999988 4789999999999999999999999999999999877654
Q ss_pred CCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC------CCCccc
Q 024023 163 DNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADH 236 (274)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~------~~~a~~ 236 (274)
||+|+.+..+++++|+++++|++|||+.+|+++|+++|+.++++.+|.. ...+++
T Consensus 157 -------------------Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~ 217 (272)
T PRK13223 157 -------------------KPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPAL 217 (272)
T ss_pred -------------------CCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCE
Confidence 9999999999999999999999999999999999999999999988753 347999
Q ss_pred cccCHhHHHHHHHHH
Q 024023 237 ALNSIHNIKEAIPEI 251 (274)
Q Consensus 237 ~~~~l~~l~~~l~~~ 251 (274)
+++++.+|.+++...
T Consensus 218 vi~~l~el~~~~~~~ 232 (272)
T PRK13223 218 VIDDLRALLPGCADP 232 (272)
T ss_pred EECCHHHHHHHHhcc
Confidence 999999998776644
No 20
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.94 E-value=3.1e-25 Score=186.74 Aligned_cols=200 Identities=20% Similarity=0.243 Sum_probs=148.7
Q ss_pred CCCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHH-----HHhcCCCChHHH
Q 024023 18 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL-----KAVGYEFDNDEF 92 (274)
Q Consensus 18 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 92 (274)
.+++++|+||+||||+|+...+..++.. +.+.+|.+......+ ....+.....+ ...+...+.+.+
T Consensus 3 ~~~~~~iiFD~DGTL~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 73 (226)
T PRK13222 3 FMDIRAVAFDLDGTLVDSAPDLAAAVNA-----ALAALGLPPAGEERV----RTWVGNGADVLVERALTWAGREPDEELL 73 (226)
T ss_pred CCcCcEEEEcCCcccccCHHHHHHHHHH-----HHHHCCCCCCCHHHH----HHHhCccHHHHHHHHHhhccCCccHHHH
Confidence 3568999999999999987777766654 555667654332221 11222222111 111112222222
Q ss_pred -------HHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCC
Q 024023 93 -------HAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPA 162 (274)
Q Consensus 93 -------~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~ 162 (274)
...+.... .....++||+.++|+.+ +.+++++|++.......+++.+|+..+|+.+++.++.+..
T Consensus 74 ~~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~---- 148 (226)
T PRK13222 74 EKLRELFDRHYAENV-AGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPNK---- 148 (226)
T ss_pred HHHHHHHHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCCC----
Confidence 22222211 13467899999999988 4789999999999999999999999999999998877654
Q ss_pred CCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC------CCCccc
Q 024023 163 DNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADH 236 (274)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~------~~~a~~ 236 (274)
||+|+++..++++++++++++++|||+.+|+++|+++|++++++.++.. ...+++
T Consensus 149 -------------------kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~ 209 (226)
T PRK13222 149 -------------------KPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDV 209 (226)
T ss_pred -------------------CcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCE
Confidence 9999999999999999999999999999999999999999999988764 346889
Q ss_pred cccCHhHHHHHHHH
Q 024023 237 ALNSIHNIKEAIPE 250 (274)
Q Consensus 237 ~~~~l~~l~~~l~~ 250 (274)
++.++.+|..++..
T Consensus 210 ~i~~~~~l~~~l~~ 223 (226)
T PRK13222 210 VIDHFAELLPLLGL 223 (226)
T ss_pred EECCHHHHHHHHHH
Confidence 99999999987654
No 21
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.94 E-value=8.5e-25 Score=188.81 Aligned_cols=197 Identities=15% Similarity=0.216 Sum_probs=147.0
Q ss_pred CccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHH-HHHhcCC-CChHH----HH
Q 024023 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAG-LKAVGYE-FDNDE----FH 93 (274)
Q Consensus 20 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~----~~ 93 (274)
.+++++||+||||+||.+.+...+.+ ..+++|.+...... +....+..... +...+.. ...+. +.
T Consensus 61 ~~k~vIFDlDGTLiDS~~~~~~a~~~-----~~~~~G~~~~~~~~----~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~ 131 (273)
T PRK13225 61 TLQAIIFDFDGTLVDSLPTVVAIANA-----HAPDFGYDPIDERD----YAQLRQWSSRTIVRRAGLSPWQQARLLQRVQ 131 (273)
T ss_pred hcCEEEECCcCccccCHHHHHHHHHH-----HHHHCCCCCCCHHH----HHHHhCccHHHHHHHcCCCHHHHHHHHHHHH
Confidence 58999999999999998888777764 56777775332111 11122222221 1222221 01111 22
Q ss_pred HHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccc
Q 024023 94 AFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIEN 170 (274)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~ 170 (274)
+.+.. ....++++||+.++|+.| +++++|+|++....+...++.+|+..+|+.+++.++.
T Consensus 132 ~~~~~--~~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~--------------- 194 (273)
T PRK13225 132 RQLGD--CLPALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPI--------------- 194 (273)
T ss_pred HHHHh--hcccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCC---------------
Confidence 22211 134678899999999998 4789999999999999999999999999988877643
Q ss_pred cccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC------CCCccccccCHhHH
Q 024023 171 NSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNI 244 (274)
Q Consensus 171 ~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~------~~~a~~~~~~l~~l 244 (274)
+++++.+..++++++++|++|++|||+.+|+.+|+++|+.++++.++.. ..+++++++++.+|
T Consensus 195 -----------~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL 263 (273)
T PRK13225 195 -----------LSKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLETPSDL 263 (273)
T ss_pred -----------CCCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECCHHHH
Confidence 4457899999999999999999999999999999999999999988764 35799999999999
Q ss_pred HHHHHHHHh
Q 024023 245 KEAIPEIWE 253 (274)
Q Consensus 245 ~~~l~~~~~ 253 (274)
.+++.++.+
T Consensus 264 ~~~~~~~~~ 272 (273)
T PRK13225 264 LQAVTQLMR 272 (273)
T ss_pred HHHHHHHhc
Confidence 998776653
No 22
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.93 E-value=7.6e-25 Score=184.01 Aligned_cols=199 Identities=25% Similarity=0.269 Sum_probs=143.8
Q ss_pred ccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHH--HH---HHHHHHHh--cC-cHH---------HHHHh
Q 024023 21 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVP--RM---CLELYREH--GT-TMA---------GLKAV 83 (274)
Q Consensus 21 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~---~~~~~~~~--~~-~~~---------~~~~~ 83 (274)
+|+|+||+||||+|+...+...+.+ +.+..|.+..... .+ ....+..+ +. ... .+...
T Consensus 1 ~k~viFD~DGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQAAEALALRL-----LFEDQGIPLTEDMFAQYKEINQGLWRAYEEGKITKDEVVNTRFSALLKEY 75 (224)
T ss_pred CCEEEEcCcCcccccchHHHHHHHH-----HHHHhCCCccHHHHHHHHHHhHHHHHHHHcCCCCHHHHHHHHHHHHHHHh
Confidence 5799999999999988877766664 4455665532111 11 01111111 11 000 11122
Q ss_pred cCCCChHHHHHHHhccCCCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCC
Q 024023 84 GYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQP 161 (274)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~ 161 (274)
+.....+.+...+.... .....++||+.++|+.++ .+++|+||+....+...++.+|+..+||.++++++.+..
T Consensus 76 ~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~--- 151 (224)
T TIGR02254 76 NTEADEALLNQKYLRFL-EEGHQLLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGIQ--- 151 (224)
T ss_pred CCCCcHHHHHHHHHHHH-hccCeeCccHHHHHHHHHhcCcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCCC---
Confidence 22222222322222211 234678999999999885 789999999999999999999999999999999988875
Q ss_pred CCCCCcccccccCcccccCCCCCHHHHHHHHHHh-CCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCC----CCCcc
Q 024023 162 ADNTDGIENNSFSSNQRILCKPSLEAIETAIRIA-NVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP----VPPAD 235 (274)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~-g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~----~~~a~ 235 (274)
||+|+++..+++++ |++|+++++|||+. +|+.+|+++|++++++.++.. ...++
T Consensus 152 --------------------KP~~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~ 211 (224)
T TIGR02254 152 --------------------KPDKEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPT 211 (224)
T ss_pred --------------------CCCHHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCc
Confidence 99999999999999 99999999999998 799999999999999987542 34678
Q ss_pred ccccCHhHHHHHH
Q 024023 236 HALNSIHNIKEAI 248 (274)
Q Consensus 236 ~~~~~l~~l~~~l 248 (274)
++++++.+|.++|
T Consensus 212 ~~~~~~~el~~~~ 224 (224)
T TIGR02254 212 YEIRSLEELYEIL 224 (224)
T ss_pred eEECCHHHHHhhC
Confidence 9999999988753
No 23
>PRK09449 dUMP phosphatase; Provisional
Probab=99.93 E-value=6.6e-25 Score=184.69 Aligned_cols=123 Identities=19% Similarity=0.236 Sum_probs=109.0
Q ss_pred CCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCC
Q 024023 104 KLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 181 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (274)
...++||+.++|+.|+ .+++|+||+........++.+|+..+||.++++++.+..
T Consensus 93 ~~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~----------------------- 149 (224)
T PRK09449 93 ICTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGVA----------------------- 149 (224)
T ss_pred cCccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccCCC-----------------------
Confidence 4678999999999994 789999999999999999999999999999999988875
Q ss_pred CCCHHHHHHHHHHhCCC-CCeEEEEcCCh-hcHHHHHHcCCeEEEECCCC-C---CCCccccccCHhHHHHHHH
Q 024023 182 KPSLEAIETAIRIANVD-PKKTIFFDDSA-RNIASAKAAGLHTVIVGSSV-P---VPPADHALNSIHNIKEAIP 249 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~-~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~-~---~~~a~~~~~~l~~l~~~l~ 249 (274)
||+|+++..+++++|+. +++|++|||+. +|+.+|+++|+.++++.++. . ...+++++.++.+|.+++.
T Consensus 150 KP~p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~~~el~~~l~ 223 (224)
T PRK09449 150 KPDVAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSSLSELEQLLC 223 (224)
T ss_pred CCCHHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECCHHHHHHHHh
Confidence 99999999999999985 47999999998 79999999999999997432 2 2458899999999988764
No 24
>PLN02940 riboflavin kinase
Probab=99.93 E-value=2.9e-25 Score=200.41 Aligned_cols=195 Identities=20% Similarity=0.256 Sum_probs=148.3
Q ss_pred CccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHH-----HHHHhcCCCChHHHHH
Q 024023 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-----GLKAVGYEFDNDEFHA 94 (274)
Q Consensus 20 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 94 (274)
.+|+|+||+||||+|+...+..++.. +++++|.+.... ......|.... .+...+.....+.+.+
T Consensus 10 ~ik~VIFDlDGTLvDt~~~~~~a~~~-----~~~~~G~~~~~~-----~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (382)
T PLN02940 10 LVSHVILDLDGTLLNTDGIVSDVLKA-----FLVKYGKQWDGR-----EAQKIVGKTPLEAAATVVEDYGLPCSTDEFNS 79 (382)
T ss_pred cCCEEEECCcCcCCcCHHHHHHHHHH-----HHHHcCCCCCHH-----HHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHH
Confidence 58999999999999988888877775 556667654321 12233333222 1222333333333322
Q ss_pred HHhccC--CCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHH-HcCCCCccceeEecccCCCCCCCCCCCCcc
Q 024023 95 FVHGKL--PYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLG-RLGLEDCFEGIICFETINPRLQPADNTDGI 168 (274)
Q Consensus 95 ~~~~~~--~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~-~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~ 168 (274)
.+.... .+....++||+.++|+.| +.+++|+||++...+...++ .+|+.++|+.+++++++...
T Consensus 80 ~~~~~~~~~~~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~---------- 149 (382)
T PLN02940 80 EITPLLSEQWCNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKG---------- 149 (382)
T ss_pred HHHHHHHHHHccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCC----------
Confidence 222111 124567899999999988 48899999999999888887 78999999999999988765
Q ss_pred cccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC----CCCccccccCHhHH
Q 024023 169 ENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNI 244 (274)
Q Consensus 169 ~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~----~~~a~~~~~~l~~l 244 (274)
||+|+.+..+++++|++|++|++|||+.+|+++|+++|+.++++.++.. ...++++++++.++
T Consensus 150 -------------KP~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~sl~el 216 (382)
T PLN02940 150 -------------KPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINSLLDL 216 (382)
T ss_pred -------------CCCHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCCHhHc
Confidence 9999999999999999999999999999999999999999999988653 45789999999998
Q ss_pred HHH
Q 024023 245 KEA 247 (274)
Q Consensus 245 ~~~ 247 (274)
...
T Consensus 217 ~~~ 219 (382)
T PLN02940 217 QPE 219 (382)
T ss_pred CHH
Confidence 643
No 25
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.93 E-value=5.8e-25 Score=180.04 Aligned_cols=174 Identities=19% Similarity=0.335 Sum_probs=128.1
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHH-----HHHhcCCCChHHHH
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAG-----LKAVGYEFDNDEFH 93 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 93 (274)
.++++|+||+||||+|+...+..++.+ +.+++|.+... . ......|..... ....+.....+.+.
T Consensus 3 ~~~~~viFD~DGTLiDs~~~~~~a~~~-----~~~~~g~~~~~-~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 72 (188)
T PRK10725 3 DRYAGLIFDMDGTILDTEPTHRKAWRE-----VLGRYGLQFDE-Q----AMVALNGSPTWRIAQAIIELNQADLDPHALA 72 (188)
T ss_pred CcceEEEEcCCCcCccCHHHHHHHHHH-----HHHHcCCCCCH-H----HHHHhcCCCHHHHHHHHHHHhCCCCCHHHHH
Confidence 367999999999999998888887775 45556665321 1 112222322211 11122233333332
Q ss_pred HHHh---ccCCCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcc
Q 024023 94 AFVH---GKLPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGI 168 (274)
Q Consensus 94 ~~~~---~~~~~~~~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~ 168 (274)
..+. .........++|+ .++|..++ .+++|+||++...+...++++|+..+|+.++++++.+..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~-~e~L~~L~~~~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~---------- 141 (188)
T PRK10725 73 REKTEAVKSMLLDSVEPLPL-IEVVKAWHGRRPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQHH---------- 141 (188)
T ss_pred HHHHHHHHHHHhccCCCccH-HHHHHHHHhCCCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccCC----------
Confidence 2111 1111244567786 47888774 789999999999999999999999999999999988765
Q ss_pred cccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEEC
Q 024023 169 ENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG 226 (274)
Q Consensus 169 ~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~ 226 (274)
||+|+.+..+++++|++|+++++|||+.+|+++|+++|++++++.
T Consensus 142 -------------KP~p~~~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 142 -------------KPAPDTFLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMDAVDVR 186 (188)
T ss_pred -------------CCChHHHHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCEEEeec
Confidence 999999999999999999999999999999999999999999874
No 26
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.93 E-value=1.2e-24 Score=182.66 Aligned_cols=195 Identities=27% Similarity=0.326 Sum_probs=144.4
Q ss_pred CccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCc----HHHHHH-hcCC--CChHHH
Q 024023 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTT----MAGLKA-VGYE--FDNDEF 92 (274)
Q Consensus 20 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~--~~~~~~ 92 (274)
+++++||||||||+||+..+..++.+ +++++|+..... .....+|.. ...+.. .... ......
T Consensus 1 ~~~avIFD~DGvLvDse~~~~~a~~~-----~~~~~g~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (221)
T COG0637 1 MIKAVIFDMDGTLVDSEPLHARAWLE-----ALKEYGIEISDE-----EIRELHGGGIARIIDLLRKLAAGEDPADLAEL 70 (221)
T ss_pred CCcEEEEcCCCCcCcchHHHHHHHHH-----HHHHcCCCCCHH-----HHHHHHCCChHHHHHHHHHHhcCCcccCHHHH
Confidence 36899999999999998888888875 778888876541 122223321 111111 1111 122222
Q ss_pred HHHHh--ccCCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCc
Q 024023 93 HAFVH--GKLPYEKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDG 167 (274)
Q Consensus 93 ~~~~~--~~~~~~~~~~~~~~~~~L~~l~---~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~ 167 (274)
..... .........+.||+.++|+.|+ .++++.|+++...+...++.+|+.++|+.+++++++...
T Consensus 71 ~~~~~~~~~~~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~~--------- 141 (221)
T COG0637 71 ERLLYEAEALELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVARG--------- 141 (221)
T ss_pred HHHHHHHHHhhhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhcC---------
Confidence 22211 1122356789999999999996 888999999999999999999999999999999988874
Q ss_pred ccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--------CCCcccccc
Q 024023 168 IENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--------VPPADHALN 239 (274)
Q Consensus 168 ~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--------~~~a~~~~~ 239 (274)
||.|+.|..+++++|+.|++|+.|+|+.+.+++|+++|+.++++..+.. ...++....
T Consensus 142 --------------KP~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv~v~~~~~~~~~~~~~~~~~~~~~~ 207 (221)
T COG0637 142 --------------KPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVVGVPAGHDRPHLDPLDAHGADTVLL 207 (221)
T ss_pred --------------CCCCHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEEEecCCCCccccchhhhhhcchhhc
Confidence 9999999999999999999999999999999999999999999986443 233455555
Q ss_pred CHhHHHHH
Q 024023 240 SIHNIKEA 247 (274)
Q Consensus 240 ~l~~l~~~ 247 (274)
++.++...
T Consensus 208 ~~~~l~~~ 215 (221)
T COG0637 208 DLAELPAL 215 (221)
T ss_pred cHHHHHHH
Confidence 55555443
No 27
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.92 E-value=1.3e-23 Score=177.18 Aligned_cols=124 Identities=26% Similarity=0.384 Sum_probs=113.1
Q ss_pred CCCCChhHHHHHHhCCCc--EEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCC
Q 024023 104 KLKPDPVLRNLLLSMPQR--KIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 181 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l~~~--~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (274)
.++++|++.++|+.++.+ ++++||+........++.+|+.++||.++++++.+..
T Consensus 97 ~~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~~----------------------- 153 (229)
T COG1011 97 LLPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVGVA----------------------- 153 (229)
T ss_pred hCccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHHcCChhhhheEEEecccccC-----------------------
Confidence 478999999999999755 9999999999999999999999999999999999976
Q ss_pred CCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCC-----CCCccccccCHhHHHHHHHH
Q 024023 182 KPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP-----VPPADHALNSIHNIKEAIPE 250 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~-----~~~a~~~~~~l~~l~~~l~~ 250 (274)
||.|.+|..+++++|++|+++++|||+. ||+.+|+++|+++||++.+.. ...+++.+.++.++.+.+..
T Consensus 154 KP~~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i~~l~~l~~~~~~ 228 (229)
T COG1011 154 KPDPEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAELLDLLER 228 (229)
T ss_pred CCCcHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEEcCHHHHHHHHhh
Confidence 9999999999999999999999999999 788999999999999987653 24788999999999987653
No 28
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.91 E-value=2.4e-23 Score=176.96 Aligned_cols=118 Identities=15% Similarity=0.194 Sum_probs=102.3
Q ss_pred CCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 103 EKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
..+.++||+.++|+.|+ .+++|+||++.. ++..|+.++|+.++++++.+..
T Consensus 110 ~~~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~~~~---------------------- 162 (238)
T PRK10748 110 SRIDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPHGRS---------------------- 162 (238)
T ss_pred hcCCCCccHHHHHHHHHcCCCEEEEECCCch-----HHHCCcHHhhceeEecccCCcC----------------------
Confidence 34688999999999994 779999998765 3678999999999999988765
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCC--------CCCccccccCHhHHHHHH
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNIKEAI 248 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~--------~~~a~~~~~~l~~l~~~l 248 (274)
||+|+++..+++++|+.|++|++|||+. +|+.+|+++|+.++++..+.. ...+++.+.++.+|.++|
T Consensus 163 -KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l~el~~~~ 238 (238)
T PRK10748 163 -KPFSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWINPENGDLMQTWDSRLLPHIEISRLASLTSLI 238 (238)
T ss_pred -CCcHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEEcCCCccccccccccCCCCEEECCHHHHHhhC
Confidence 9999999999999999999999999995 999999999999999976432 135888999999988753
No 29
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.91 E-value=7.4e-23 Score=169.08 Aligned_cols=104 Identities=21% Similarity=0.375 Sum_probs=96.5
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCccccc
Q 024023 103 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 179 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (274)
....++||+.++|+.| |++++|+||++...+...++.+|+..+|+.++++++++..
T Consensus 89 ~~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~--------------------- 147 (198)
T TIGR01428 89 LRLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRAY--------------------- 147 (198)
T ss_pred hcCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCCC---------------------
Confidence 3467899999999988 4789999999999999999999999999999999998875
Q ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 180 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 180 ~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
||+|+++..+++++|++|+++++|||+.+|+.+|+++|+.+++++.+.
T Consensus 148 --KP~~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i~v~r~~ 195 (198)
T TIGR01428 148 --KPAPQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTAWVNRPG 195 (198)
T ss_pred --CCCHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEEEecCCC
Confidence 999999999999999999999999999999999999999999997654
No 30
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.91 E-value=2.2e-23 Score=193.08 Aligned_cols=202 Identities=14% Similarity=0.219 Sum_probs=144.0
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhh-cCCCcchHHHHHHHHHHHhcCcHHHH-HHhcCCCC---hHHHH
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQH-LHIDESEVPRMCLELYREHGTTMAGL-KAVGYEFD---NDEFH 93 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~ 93 (274)
+|+++|+|||||||+|+...+..++.+.+.++.... .+.... . ..+....|...... ..+..... .+.+.
T Consensus 239 ~m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~~~~~~~-~----~~~~~~~G~~~~~~~~~l~~~~~~~~~~~~~ 313 (459)
T PRK06698 239 EMLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQLWDTVTP-I----DKYREIMGVPLPKVWEALLPDHSLEIREQTD 313 (459)
T ss_pred HhhhheeEccCCceecchhHHHHHHHHHHHHHhhhcccCCCCC-H----HHHHHHcCCChHHHHHHHhhhcchhHHHHHH
Confidence 457999999999999999988888887665532111 111111 0 12223334332221 11111111 11222
Q ss_pred HH----HhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCC
Q 024023 94 AF----VHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTD 166 (274)
Q Consensus 94 ~~----~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~ 166 (274)
.. +.+.......+++||+.++|++| +.+++|+||+....+...++.+|+..+|+.+++++++..
T Consensus 314 ~~~~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~~--------- 384 (459)
T PRK06698 314 AYFLERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQINS--------- 384 (459)
T ss_pred HHHHHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCCC---------
Confidence 22 22211123568899999999888 488999999999999999999999999999999987642
Q ss_pred cccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC----CCCccccccCHh
Q 024023 167 GIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIH 242 (274)
Q Consensus 167 ~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~----~~~a~~~~~~l~ 242 (274)
||||+.+..++++++ |++|++|||+.+|+.+|+++|+.++++.++.. ...++++++++.
T Consensus 385 ---------------~~kP~~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~ 447 (459)
T PRK06698 385 ---------------LNKSDLVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDDLL 447 (459)
T ss_pred ---------------CCCcHHHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCCHH
Confidence 778889999998865 68999999999999999999999999987653 346899999999
Q ss_pred HHHHHHHHH
Q 024023 243 NIKEAIPEI 251 (274)
Q Consensus 243 ~l~~~l~~~ 251 (274)
+|.+++...
T Consensus 448 el~~~l~~~ 456 (459)
T PRK06698 448 ELKGILSTV 456 (459)
T ss_pred HHHHHHHHH
Confidence 999876544
No 31
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.91 E-value=3.8e-23 Score=180.01 Aligned_cols=198 Identities=19% Similarity=0.282 Sum_probs=134.2
Q ss_pred CccEEEEecCCCccCCc-hhHHHHHHHHHHHHHHhhcCCCc-chHHHHHHHHHHHhcCcHHH----HHHhcCC-------
Q 024023 20 NYECLLFDLDDTLYPLS-TGFNLACRRNIEEFMSQHLHIDE-SEVPRMCLELYREHGTTMAG----LKAVGYE------- 86 (274)
Q Consensus 20 ~~k~viFDlDGTL~d~~-~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~------- 86 (274)
++++|||||||||+|+. ..+..++.+ +++.+|++. .........+.. .|..... +...+..
T Consensus 39 ~~k~VIFDlDGTLvDS~~~~~~~a~~~-----~l~~~G~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~ 112 (286)
T PLN02779 39 LPEALLFDCDGVLVETERDGHRVAFND-----AFKEFGLRPVEWDVELYDELLN-IGGGKERMTWYFNENGWPTSTIEKA 112 (286)
T ss_pred CCcEEEEeCceeEEccccHHHHHHHHH-----HHHHcCCCCCCCCHHHHHHHHc-cCCChHHHHHHHHHcCCCccccccC
Confidence 57999999999999988 777777765 556677732 111111011111 2221111 1111111
Q ss_pred -CChH-------HHH----HHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccce--e
Q 024023 87 -FDND-------EFH----AFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEG--I 149 (274)
Q Consensus 87 -~~~~-------~~~----~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~--i 149 (274)
...+ .+. ..+........+.++||+.++|+.| |++++|+||++...+..+++.++...+|+. +
T Consensus 113 ~~~~e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~ 192 (286)
T PLN02779 113 PKDEEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDV 192 (286)
T ss_pred CccchhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEE
Confidence 0111 111 1121111112358999999999887 589999999999999988887643334432 3
Q ss_pred EecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 150 ICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
+++++++.. ||+|+++..+++++|++|++|++|||+.+|+++|+++|+.++++.++.
T Consensus 193 v~~~~~~~~-----------------------KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~ 249 (286)
T PLN02779 193 FAGDDVPKK-----------------------KPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSY 249 (286)
T ss_pred EeccccCCC-----------------------CCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCC
Confidence 366666554 999999999999999999999999999999999999999999998765
Q ss_pred C----CCCccccccCHhHHHH
Q 024023 230 P----VPPADHALNSIHNIKE 246 (274)
Q Consensus 230 ~----~~~a~~~~~~l~~l~~ 246 (274)
. ...++++++++.++..
T Consensus 250 ~~~~~l~~ad~vi~~~~~l~~ 270 (286)
T PLN02779 250 TADEDFSGADAVFDCLGDVPL 270 (286)
T ss_pred ccccccCCCcEEECChhhcch
Confidence 3 2468999999999874
No 32
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.91 E-value=2.1e-23 Score=170.22 Aligned_cols=170 Identities=22% Similarity=0.341 Sum_probs=122.6
Q ss_pred ccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHH-----HHHhcCCCChHHHH--
Q 024023 21 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAG-----LKAVGYEFDNDEFH-- 93 (274)
Q Consensus 21 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-- 93 (274)
+|+|+||+||||+|+...+..++.+ +.+++|.+... .. .....|..... +...+...+.+.+.
T Consensus 1 ~~~iiFD~DGTL~ds~~~~~~~~~~-----~~~~~g~~~~~--~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPLHAQAWKH-----LADKYGIEFDK--QY---NTSLGGLSREDILRAILKLRKPGLSLETIHQL 70 (185)
T ss_pred CCeEEEcCCCcccCChHHHHHHHHH-----HHHHcCCCCCH--HH---HHHcCCCCHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 4789999999999988776666664 45566665321 11 11112222111 11111123333222
Q ss_pred -----HHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCC
Q 024023 94 -----AFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNT 165 (274)
Q Consensus 94 -----~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~ 165 (274)
+.+..........++||+.++|+.| +.+++++|++ ..+...++.+|+..+|+.++++++.+..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~~~------- 141 (185)
T TIGR02009 71 AERKNELYRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVKEG------- 141 (185)
T ss_pred HHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCCCC-------
Confidence 1221111123478999999999888 4788999988 6678899999999999999999887764
Q ss_pred CcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEE
Q 024023 166 DGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 225 (274)
Q Consensus 166 ~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v 225 (274)
||+|+.+..+++++|++|+++++|||+.+|+++|+++|++++++
T Consensus 142 ----------------kp~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 142 ----------------KPHPETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMFAVAV 185 (185)
T ss_pred ----------------CCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeEeeC
Confidence 99999999999999999999999999999999999999999864
No 33
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.90 E-value=1.8e-23 Score=170.61 Aligned_cols=169 Identities=26% Similarity=0.311 Sum_probs=121.7
Q ss_pred EEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHH-----HHHHhcCCCChHHHHH---
Q 024023 23 CLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-----GLKAVGYEFDNDEFHA--- 94 (274)
Q Consensus 23 ~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~--- 94 (274)
+|+||+||||+|+...+..++.+ +.+.+|.+.... ......|.... .+...+...+.+.+.+
T Consensus 1 ~iiFD~DGTL~ds~~~~~~~~~~-----~~~~~g~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (185)
T TIGR01990 1 AVIFDLDGVITDTAEYHYLAWKA-----LADELGIPFDEE-----FNESLKGVSREDSLERILDLGGKKYSEEEKEELAE 70 (185)
T ss_pred CeEEcCCCccccChHHHHHHHHH-----HHHHcCCCCCHH-----HHHHhcCCChHHHHHHHHHhcCCCCCHHHHHHHHH
Confidence 48999999999988888777765 556667653321 11111222111 1122233333332221
Q ss_pred ----HHhccCC-CCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCC
Q 024023 95 ----FVHGKLP-YEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTD 166 (274)
Q Consensus 95 ----~~~~~~~-~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~ 166 (274)
.+..... .....++||+.++|+.| +.+++|+|++.. ....++.+|+..+|+.++++++.+..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~~~~-------- 140 (185)
T TIGR01990 71 RKNDYYVELLKELTPADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEIKKG-------- 140 (185)
T ss_pred HHHHHHHHHHHhcCCcccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhcCCC--------
Confidence 1111110 12347899999999988 478999998653 45688999999999999999988765
Q ss_pred cccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEEC
Q 024023 167 GIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG 226 (274)
Q Consensus 167 ~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~ 226 (274)
||+|+.+..++++++++|+++++|||+.+|+.+|+++|+.++++.
T Consensus 141 ---------------kp~p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~~i~v~ 185 (185)
T TIGR01990 141 ---------------KPDPEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFAVGVG 185 (185)
T ss_pred ---------------CCChHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCEEEecC
Confidence 999999999999999999999999999999999999999999873
No 34
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.90 E-value=1.9e-22 Score=167.17 Aligned_cols=173 Identities=18% Similarity=0.246 Sum_probs=121.4
Q ss_pred cEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHH---HHH-------h----cCcHH---------
Q 024023 22 ECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLEL---YRE-------H----GTTMA--------- 78 (274)
Q Consensus 22 k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~-------~----~~~~~--------- 78 (274)
|+|+||+||||+|+...+..++.+ +.++.|++..... ....+ +.. + |....
T Consensus 1 k~viFDlDGTL~d~~~~~~~a~~~-----~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 74 (203)
T TIGR02252 1 KLITFDAVGTLLALKEPVGEVYCE-----IARKYGVEVSPDE-LEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRD 74 (203)
T ss_pred CeEEEecCCceeeeCCCHHHHHHH-----HHHHhCCCCCHHH-HHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHH
Confidence 589999999999988888887775 5566777643211 11111 110 0 11110
Q ss_pred HHHHhcCCC--ChHHHHHHHhcc-CCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEec
Q 024023 79 GLKAVGYEF--DNDEFHAFVHGK-LPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICF 152 (274)
Q Consensus 79 ~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~ 152 (274)
.+...+... ....+.+.+... .......++||+.++|+.| +.+++|+||++.. ....++.+|+..+|+.++++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s 153 (203)
T TIGR02252 75 TFGRAGVPDPESFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTS 153 (203)
T ss_pred HHHhcCCCCchhHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEee
Confidence 111122111 111111111111 1123457899999999988 4789999998765 47788999999999999999
Q ss_pred ccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEE
Q 024023 153 ETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVI 224 (274)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~ 224 (274)
++.+.. ||+|+.+..+++++|++|+++++|||+. +|+.+|+++|+.+++
T Consensus 154 ~~~~~~-----------------------KP~~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 154 YEVGAE-----------------------KPDPKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred cccCCC-----------------------CCCHHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCeeeC
Confidence 988865 9999999999999999999999999998 899999999999874
No 35
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.89 E-value=3.7e-23 Score=166.26 Aligned_cols=168 Identities=30% Similarity=0.477 Sum_probs=122.8
Q ss_pred EEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHH-----HHHhcCCCChHHHHHHHhc
Q 024023 24 LLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAG-----LKAVGYEFDNDEFHAFVHG 98 (274)
Q Consensus 24 viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 98 (274)
|+||+||||+|+...+...+.. .+.+.++.+.. . .......+..... +...+. ....+.+.+.+
T Consensus 1 iifD~dgtL~d~~~~~~~~~~~----~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 69 (176)
T PF13419_consen 1 IIFDLDGTLVDTDPAIFRALQR----LALEEFGLEIS-A----EELRELFGKSYEEALERLLERFGI--DPEEIQELFRE 69 (176)
T ss_dssp EEEESBTTTEEHHHHHHHHHHH----HHHHHTTHHHH-H----HHHHHHTTSHHHHHHHHHHHHHHH--HHHHHHHHHHH
T ss_pred cEEECCCCcEeCHHHHHHHHHH----HHHHHhCCCCC-H----HHHHHHhCCCHHHHHHHhhhccch--hHHHHHHHhhh
Confidence 7999999999966644444443 34555555421 1 1111112211111 111111 13333333333
Q ss_pred cCCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCc
Q 024023 99 KLPYEKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSS 175 (274)
Q Consensus 99 ~~~~~~~~~~~~~~~~L~~l~---~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (274)
........++||+.++|+.|+ .+++++||++...+...++.+|+.++|+.++++++.+..
T Consensus 70 ~~~~~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~----------------- 132 (176)
T PF13419_consen 70 YNLESKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGSR----------------- 132 (176)
T ss_dssp HHHHGGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSSS-----------------
T ss_pred hhhhhccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhhh-----------------
Confidence 221256789999999998884 999999999999999999999999999999999988875
Q ss_pred ccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEE
Q 024023 176 NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 225 (274)
Q Consensus 176 ~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v 225 (274)
||+++.+..+++++|++|+++++|||+..|+.+|+++|+.+|++
T Consensus 133 ------Kp~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 133 ------KPDPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp ------TTSHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEEEEE
T ss_pred ------hhHHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeEEeC
Confidence 99999999999999999999999999999999999999999986
No 36
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.89 E-value=2.5e-22 Score=165.83 Aligned_cols=183 Identities=15% Similarity=0.152 Sum_probs=122.9
Q ss_pred CccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHHHHhcCCCChHHH---HHHH
Q 024023 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEF---HAFV 96 (274)
Q Consensus 20 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 96 (274)
|+|+|+||+||||+|....+ . .+.+..|++... +...+......... ...+ ...+.. .+.+
T Consensus 1 m~k~viFDlDGTLiD~~~~~----~-----~~~~~~g~~~~~---~~~~~g~~~~~~~~--~~~~--~~~~~~~~~~~~~ 64 (197)
T PHA02597 1 MKPTILTDVDGVLLSWQSGL----P-----YFAQKYNIPTDH---ILKMIQDERFRDPG--ELFG--CDQELAKKLIEKY 64 (197)
T ss_pred CCcEEEEecCCceEchhhcc----H-----HHHHhcCCCHHH---HHHHHhHhhhcCHH--HHhc--ccHHHHHHHhhhh
Confidence 36899999999999944332 2 245567765421 11111111001111 1111 111111 2222
Q ss_pred hccCCCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCC----ccceeEecccCCCCCCCCCCCCcccc
Q 024023 97 HGKLPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLED----CFEGIICFETINPRLQPADNTDGIEN 170 (274)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~----~fd~i~~~~~~~~~~~~~~~~~~~~~ 170 (274)
..........++||+.++|+.|+ .+++++|+.+.......++.+++.. +|+.++++++.
T Consensus 65 ~~~~~~~~~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~--------------- 129 (197)
T PHA02597 65 NNSDFIRYLSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHD--------------- 129 (197)
T ss_pred hHHHHHHhccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccC---------------
Confidence 21112245679999999999994 5678888887776666777777765 45666666642
Q ss_pred cccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHc--CCeEEEECCCCC--CCCccccccCHhHHHH
Q 024023 171 NSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA--GLHTVIVGSSVP--VPPADHALNSIHNIKE 246 (274)
Q Consensus 171 ~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~--G~~~v~v~~~~~--~~~a~~~~~~l~~l~~ 246 (274)
||||+.+..+++++| ++++++|||+.+|+.+|+++ |++++++.++.. ...++|.+.++.++.+
T Consensus 130 -----------~~kp~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (197)
T PHA02597 130 -----------ESKEKLFIKAKEKYG--DRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGERDHIPKLAHRVKSWNDIEN 196 (197)
T ss_pred -----------cccHHHHHHHHHHhC--CCcEEEeCCCHHHHHHHHHHHcCCcEEEecchhhccccchhhhhccHHHHhc
Confidence 778999999999999 88899999999999999999 999999999875 3367799999988864
No 37
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.88 E-value=1.5e-21 Score=195.28 Aligned_cols=194 Identities=20% Similarity=0.257 Sum_probs=146.3
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHHH-----HhcC-CCChHH-
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLK-----AVGY-EFDNDE- 91 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~- 91 (274)
+++++|+|||||||+|+...+..++.+ +++++|++.... .+....|....... ..+. ....+.
T Consensus 73 ~~ikaVIFDlDGTLiDS~~~~~~a~~~-----~~~~~G~~it~e-----~~~~~~G~~~~~~~~~~~~~~~l~~~~~~~~ 142 (1057)
T PLN02919 73 GKVSAVLFDMDGVLCNSEEPSRRAAVD-----VFAEMGVEVTVE-----DFVPFMGTGEANFLGGVASVKGVKGFDPDAA 142 (1057)
T ss_pred CCCCEEEECCCCCeEeChHHHHHHHHH-----HHHHcCCCCCHH-----HHHHHhCCCHHHHHHHHHHhcCCCCCCHHHH
Confidence 468999999999999988888777765 556677764321 12233343332211 1111 112222
Q ss_pred ---HHHHHhccCC-CCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCC-CccceeEecccCCCCCCCCC
Q 024023 92 ---FHAFVHGKLP-YEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLE-DCFEGIICFETINPRLQPAD 163 (274)
Q Consensus 92 ---~~~~~~~~~~-~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~-~~fd~i~~~~~~~~~~~~~~ 163 (274)
+.+.+...+. .....++||+.++|+.| +++++|+||.....+...++.+|+. .+|+.+++++++...
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~----- 217 (1057)
T PLN02919 143 KKRFFEIYLEKYAKPNSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENL----- 217 (1057)
T ss_pred HHHHHHHHHHHhhhcccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccC-----
Confidence 2222222111 11234799999999998 4899999999999999999999996 789999999988765
Q ss_pred CCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-----CCCccccc
Q 024023 164 NTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHAL 238 (274)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-----~~~a~~~~ 238 (274)
||+|+++..+++++|++|++|++|||+.+|+++|+++|++++++.++.. ..++++++
T Consensus 218 ------------------KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi 279 (1057)
T PLN02919 218 ------------------KPAPDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIR 279 (1057)
T ss_pred ------------------CCCHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEE
Confidence 9999999999999999999999999999999999999999999988754 46789999
Q ss_pred cCHhHHH
Q 024023 239 NSIHNIK 245 (274)
Q Consensus 239 ~~l~~l~ 245 (274)
+++.++.
T Consensus 280 ~~l~el~ 286 (1057)
T PLN02919 280 KDIGNIS 286 (1057)
T ss_pred CChHHCC
Confidence 9999985
No 38
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.87 E-value=2.5e-22 Score=163.37 Aligned_cols=97 Identities=34% Similarity=0.556 Sum_probs=88.5
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCC
Q 024023 105 LKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 181 (274)
Q Consensus 105 ~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (274)
+.++||+.++|+.| |.+++++||++... ...+.++|+..+|+.++++++.+..
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~~~----------------------- 139 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVGRG----------------------- 139 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCCCC-----------------------
Confidence 68899999999888 47899999999888 6666669999999999999888765
Q ss_pred CCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEE
Q 024023 182 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 225 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v 225 (274)
||+|+.+..+++++|++|+++++|||+..|+.+|+++|+.++++
T Consensus 140 KP~~~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 140 KPDPDIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMHTVLV 183 (183)
T ss_pred CCCHHHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCEEEeC
Confidence 99999999999999999999999999999999999999999874
No 39
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.87 E-value=1.2e-21 Score=164.29 Aligned_cols=197 Identities=16% Similarity=0.213 Sum_probs=126.2
Q ss_pred CCCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcC-cHH-----HHHHhcCCCChHH
Q 024023 18 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGT-TMA-----GLKAVGYEFDNDE 91 (274)
Q Consensus 18 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~ 91 (274)
++++++++||+||||+++. .+. .+.+..|.+... ......... |. ... .+..+ .....+.
T Consensus 11 ~~~~k~iiFD~DGTL~~~~-~~~---------~l~~~~g~~~~~-~~~~~~~~~--g~~~~~~~~~~~~~~~-~~~~~~~ 76 (219)
T TIGR00338 11 LRSKKLVVFDMDSTLINAE-TID---------EIAKIAGVEEEV-SEITERAMR--GELDFKASLRERVALL-KGLPVEL 76 (219)
T ss_pred hccCCEEEEeCcccCCCch-HHH---------HHHHHhCCHHHH-HHHHHHHHc--CCCCHHHHHHHHHHHh-CCCCHHH
Confidence 4578999999999999953 221 134455553221 111111111 11 000 11111 1222333
Q ss_pred HHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcc
Q 024023 92 FHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGI 168 (274)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~ 168 (274)
+.... +.+.++||+.++|+.| +.+++|+|++....+..+++.+|+..+|+..+..++..
T Consensus 77 ~~~~~------~~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~------------ 138 (219)
T TIGR00338 77 LKEVR------ENLPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGK------------ 138 (219)
T ss_pred HHHHH------hcCCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCE------------
Confidence 33333 3356899999998887 58899999999999999999999988886544332211
Q ss_pred cccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCCcccccc--CHhHHHH
Q 024023 169 ENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALN--SIHNIKE 246 (274)
Q Consensus 169 ~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~a~~~~~--~l~~l~~ 246 (274)
.++...+....++||+..+..+++++++++++|++|||+.+|+++|+++|+++++.+...-...+++++. ++.++.+
T Consensus 139 -~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~~~~~~~~~a~~~i~~~~~~~~~~ 217 (219)
T TIGR00338 139 -LTGLVEGPIVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFNAKPKLQQKADICINKKDLTDILP 217 (219)
T ss_pred -EEEEecCcccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeCCCHHHHHhchhccCCCCHHHHHh
Confidence 0111122223347899999999999999999999999999999999999998765332222456888866 5566655
Q ss_pred H
Q 024023 247 A 247 (274)
Q Consensus 247 ~ 247 (274)
+
T Consensus 218 ~ 218 (219)
T TIGR00338 218 L 218 (219)
T ss_pred h
Confidence 4
No 40
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.87 E-value=2.5e-21 Score=161.45 Aligned_cols=101 Identities=22% Similarity=0.270 Sum_probs=87.5
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCCChHH--HHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccc
Q 024023 104 KLKPDPVLRNLLLSM---PQRKIIFTNADQKH--AMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR 178 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~--~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (274)
...++||+.++|+.| |++++|+||+.... ....+...++..+||.++++++.+..
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~-------------------- 151 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGLR-------------------- 151 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCCC--------------------
Confidence 467899999999888 48899999986543 33344456788899999999888765
Q ss_pred cCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECC
Q 024023 179 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGS 227 (274)
Q Consensus 179 ~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~ 227 (274)
||+|+.+..+++++|++|++|++|||+..|+.+|+++|++++++.+
T Consensus 152 ---KP~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~~ 197 (211)
T TIGR02247 152 ---KPDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTIKVSD 197 (211)
T ss_pred ---CCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEEEECC
Confidence 9999999999999999999999999999999999999999999866
No 41
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.86 E-value=2e-20 Score=154.72 Aligned_cols=102 Identities=19% Similarity=0.348 Sum_probs=90.6
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHH-cCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 105 LKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGR-LGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 105 ~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~-~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
..++||+.++|+.+ |.+++|+||++.......+.. .++..+||.++++++++..
T Consensus 83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~---------------------- 140 (199)
T PRK09456 83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMR---------------------- 140 (199)
T ss_pred hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCC----------------------
Confidence 35789999999988 488999999998877665554 4778899999999998875
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
||+|+.+..+++++|++|+++++|||+..|+.+|+++|+.++++.++.
T Consensus 141 -KP~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i~~~~~~ 188 (199)
T PRK09456 141 -KPEARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITSILVTDKQ 188 (199)
T ss_pred -CCCHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEEEecCCc
Confidence 999999999999999999999999999999999999999999987754
No 42
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.85 E-value=2.3e-20 Score=154.12 Aligned_cols=88 Identities=25% Similarity=0.326 Sum_probs=77.7
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCC
Q 024023 107 PDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 183 (274)
Q Consensus 107 ~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp 183 (274)
+.++..++|+.| |.+++|+||++...+...++.+|+..+|+.++++++... ||
T Consensus 107 ~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~------------------------KP 162 (197)
T TIGR01548 107 TLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDCPP------------------------KP 162 (197)
T ss_pred cccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCCCC------------------------Cc
Confidence 334446666655 689999999999999999999999999999999987653 99
Q ss_pred CHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHc
Q 024023 184 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA 218 (274)
Q Consensus 184 ~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~ 218 (274)
+|+.+..+++++|+++++|++|||+.+|+.+|+++
T Consensus 163 ~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 163 NPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred CHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 99999999999999999999999999999999874
No 43
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=99.85 E-value=4.6e-21 Score=155.17 Aligned_cols=89 Identities=19% Similarity=0.264 Sum_probs=82.4
Q ss_pred CCCCCChhHHHHHHhCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 103 EKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
..+.++||+.++|+ +++|+||++...+...++++|+..+|+.++++++++.. |
T Consensus 87 ~~~~~~~g~~~~L~----~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~-----------------------K 139 (175)
T TIGR01493 87 KNLPPWPDSAAALA----RVAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVRAY-----------------------K 139 (175)
T ss_pred hcCCCCCchHHHHH----HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcCCC-----------------------C
Confidence 34679999999998 47899999999999999999999999999999988775 9
Q ss_pred CCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHc
Q 024023 183 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA 218 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~ 218 (274)
|+|+.|..+++++|++|++|++|||+.+|+.+|+++
T Consensus 140 P~p~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 140 PDPVVYELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred CCHHHHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 999999999999999999999999999999999864
No 44
>PLN02811 hydrolase
Probab=99.84 E-value=1.5e-20 Score=157.89 Aligned_cols=185 Identities=18% Similarity=0.207 Sum_probs=131.4
Q ss_pred cCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHH-----HHHhcCC--CChHHHHHH---Hh
Q 024023 28 LDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAG-----LKAVGYE--FDNDEFHAF---VH 97 (274)
Q Consensus 28 lDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~--~~~~~~~~~---~~ 97 (274)
|||||+|+...+..++.+ +++++|++... .......|..... ....+.+ ...+.+.+. +.
T Consensus 1 ~DGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~-----~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (220)
T PLN02811 1 MDGLLLDTEKFYTEVQEK-----ILARYGKTFDW-----SLKAKMMGKKAIEAARIFVEESGLSDSLSPEDFLVEREAML 70 (220)
T ss_pred CCCcceecHHHHHHHHHH-----HHHHcCCCCCH-----HHHHHccCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 799999988887777765 56677775321 1122233443321 1112222 122222221 11
Q ss_pred ccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHH-HHHHcCCCCccceeEecc--cCCCCCCCCCCCCccccc
Q 024023 98 GKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAME-VLGRLGLEDCFEGIICFE--TINPRLQPADNTDGIENN 171 (274)
Q Consensus 98 ~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~-~l~~~gl~~~fd~i~~~~--~~~~~~~~~~~~~~~~~~ 171 (274)
... .....++||+.++|+.| +++++|+||........ .++..++.++|+.+++++ +++..
T Consensus 71 ~~~-~~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~------------- 136 (220)
T PLN02811 71 QDL-FPTSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQG------------- 136 (220)
T ss_pred HHH-HhhCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCC-------------
Confidence 111 23567899999999888 58999999998765554 334457888999999999 66654
Q ss_pred ccCcccccCCCCCHHHHHHHHHHhC---CCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC----CCCccccccCHhHH
Q 024023 172 SFSSNQRILCKPSLEAIETAIRIAN---VDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNI 244 (274)
Q Consensus 172 ~~~~~~~~~~kp~~~~~~~~l~~~g---~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~----~~~a~~~~~~l~~l 244 (274)
||+|+++..+++++| ++|++|++|||+.+|+++|+++|++++++.++.. ...++++++++.++
T Consensus 137 ----------KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~~~e~ 206 (220)
T PLN02811 137 ----------KPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSLLDF 206 (220)
T ss_pred ----------CCCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcCHhhC
Confidence 999999999999997 9999999999999999999999999999987653 34688888888876
Q ss_pred HH
Q 024023 245 KE 246 (274)
Q Consensus 245 ~~ 246 (274)
..
T Consensus 207 ~~ 208 (220)
T PLN02811 207 KP 208 (220)
T ss_pred CH
Confidence 53
No 45
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.83 E-value=1.4e-19 Score=143.37 Aligned_cols=151 Identities=22% Similarity=0.257 Sum_probs=109.6
Q ss_pred EEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHHHHhcCCCChHHHHHHHhccCCC
Q 024023 23 CLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPY 102 (274)
Q Consensus 23 ~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (274)
+|+||+||||+|+...+..++.+ ..++.+.... .+....|.....+.... ..+.+.. . ..
T Consensus 1 ~iifD~DGTL~d~~~~~~~~~~~-----~~~~~~~~~~-------~~~~~~g~~~~~~~~~~-----~~~~~~~-~--~~ 60 (154)
T TIGR01549 1 AILFDIDGTLVDSSFAIRRAFEE-----TLEEFGEDFQ-------ALKALRGLAEELLYRIA-----TSFEELL-G--YD 60 (154)
T ss_pred CeEecCCCcccccHHHHHHHHHH-----HHHHhcccHH-------HHHHHHccChHHHHHHH-----HHHHHHh-C--cc
Confidence 48999999999988777777765 3334443221 11112222222211110 1122221 1 11
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCccccc
Q 024023 103 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 179 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (274)
.....+||+.++|+.| +.+++|+|++....+...++.+ +..+|+.+++.++.+ .
T Consensus 61 ~~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~~-~--------------------- 117 (154)
T TIGR01549 61 AEEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEFG-A--------------------- 117 (154)
T ss_pred hhheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCCC-C---------------------
Confidence 2345678999999888 4889999999999999999987 788899999988776 5
Q ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcC
Q 024023 180 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAG 219 (274)
Q Consensus 180 ~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G 219 (274)
||+|+.+..+++++|+++ +|++|||+.+|+.+|+++|
T Consensus 118 --Kp~~~~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 118 --KPEPEIFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred --CcCHHHHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 999999999999999999 9999999999999999987
No 46
>PLN02954 phosphoserine phosphatase
Probab=99.83 E-value=8e-19 Score=147.64 Aligned_cols=201 Identities=15% Similarity=0.207 Sum_probs=124.2
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHH-HHH-hc-CCCChHHHHHH
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAG-LKA-VG-YEFDNDEFHAF 95 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~-~~~~~~~~~~~ 95 (274)
+++|+|+|||||||+++. .+ . .+.+.+|.+.. .......+... ...... +.. ++ .....+.+...
T Consensus 10 ~~~k~viFDfDGTL~~~~-~~----~-----~~~~~~g~~~~-~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (224)
T PLN02954 10 RSADAVCFDVDSTVCVDE-GI----D-----ELAEFCGAGEA-VAEWTAKAMGG-SVPFEEALAARLSLFKPSLSQVEEF 77 (224)
T ss_pred ccCCEEEEeCCCcccchH-HH----H-----HHHHHcCChHH-HHHHHHHHHCC-CCCHHHHHHHHHHHcCCCHHHHHHH
Confidence 468999999999999942 22 1 25556665421 11111111110 011111 111 10 11233444444
Q ss_pred HhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCC--CccceeEecccCCCCCCCCCCCCcccc
Q 024023 96 VHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLE--DCFEGIICFETINPRLQPADNTDGIEN 170 (274)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~--~~fd~i~~~~~~~~~~~~~~~~~~~~~ 170 (274)
+.. ....++||+.++|+.+ +.+++|+|++....+..+++.+|+. .+|+..+..++.+.. .
T Consensus 78 ~~~----~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~-----------~ 142 (224)
T PLN02954 78 LEK----RPPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEY-----------A 142 (224)
T ss_pred HHH----ccCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcE-----------E
Confidence 433 1246889999998887 4789999999999999999999996 356442222211100 0
Q ss_pred cccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-----CCCccccccCHhHHH
Q 024023 171 NSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHALNSIHNIK 245 (274)
Q Consensus 171 ~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-----~~~a~~~~~~l~~l~ 245 (274)
+.......+.+++|++.+..+++++|. +++++|||+.+|+.+++++|+.++...++.. ...++++++++.+|.
T Consensus 143 g~~~~~~~~~~~~K~~~i~~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~ 220 (224)
T PLN02954 143 GFDENEPTSRSGGKAEAVQHIKKKHGY--KTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDLI 220 (224)
T ss_pred CccCCCcccCCccHHHHHHHHHHHcCC--CceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHHH
Confidence 001111122357889999999999885 6899999999999999998888765433321 346899999999998
Q ss_pred HHH
Q 024023 246 EAI 248 (274)
Q Consensus 246 ~~l 248 (274)
+++
T Consensus 221 ~~~ 223 (224)
T PLN02954 221 EVL 223 (224)
T ss_pred Hhh
Confidence 753
No 47
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.81 E-value=7.5e-19 Score=143.20 Aligned_cols=120 Identities=22% Similarity=0.242 Sum_probs=96.3
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCCh---------------HHHHHHHHHcCCCCccceeEecc-----cCCCCCCC
Q 024023 105 LKPDPVLRNLLLSM---PQRKIIFTNADQ---------------KHAMEVLGRLGLEDCFEGIICFE-----TINPRLQP 161 (274)
Q Consensus 105 ~~~~~~~~~~L~~l---~~~~~i~s~~~~---------------~~~~~~l~~~gl~~~fd~i~~~~-----~~~~~~~~ 161 (274)
+.++||+.++|+.| +++++|+||.+. ..+...++.+|+ +|+.++.+. +.+.
T Consensus 28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~~i~~~~~~~~~~~~~---- 101 (181)
T PRK08942 28 WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLDGIYYCPHHPEDGCDC---- 101 (181)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCCCCCcC----
Confidence 35778999998888 588999999863 334445666776 377777543 2333
Q ss_pred CCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-----CCCc--
Q 024023 162 ADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPA-- 234 (274)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-----~~~a-- 234 (274)
.||+|+.+..+++++|++++++++|||+.+|+.+|+++|+.++++.++.. ...+
T Consensus 102 -------------------~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~ 162 (181)
T PRK08942 102 -------------------RKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPG 162 (181)
T ss_pred -------------------CCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCC
Confidence 49999999999999999999999999999999999999999999987653 2345
Q ss_pred cccccCHhHHHHHHH
Q 024023 235 DHALNSIHNIKEAIP 249 (274)
Q Consensus 235 ~~~~~~l~~l~~~l~ 249 (274)
++++.++.++.+.+.
T Consensus 163 ~~ii~~l~el~~~l~ 177 (181)
T PRK08942 163 TWVLDSLADLPQALK 177 (181)
T ss_pred ceeecCHHHHHHHHH
Confidence 899999999988654
No 48
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.80 E-value=4.9e-19 Score=146.19 Aligned_cols=113 Identities=14% Similarity=0.115 Sum_probs=88.2
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 104 KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
.+.++||+.++|+.| |.+++|+|++....+...++.+|+..+|+..+..++.+.. ... ......
T Consensus 78 ~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~-----------~p~--~~~~~~ 144 (201)
T TIGR01491 78 EISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFI-----------QPD--GIVRVT 144 (201)
T ss_pred hCCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeE-----------ecc--eeeEEc
Confidence 357899999998888 5899999999999999999999998888776665543321 000 000111
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
.++|++.+..+++++|++++++++||||.+|+.+|+.+|+.++..+.+.
T Consensus 145 ~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~ 193 (201)
T TIGR01491 145 FDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGH 193 (201)
T ss_pred cccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCcc
Confidence 2456678999999999999999999999999999999999888765544
No 49
>PRK06769 hypothetical protein; Validated
Probab=99.79 E-value=1.1e-18 Score=141.09 Aligned_cols=121 Identities=17% Similarity=0.157 Sum_probs=95.0
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChH--------HHHHHHHHcCCCCccceeE-ecccCCCCCCCCCCCCcccccc
Q 024023 105 LKPDPVLRNLLLSM---PQRKIIFTNADQK--------HAMEVLGRLGLEDCFEGII-CFETINPRLQPADNTDGIENNS 172 (274)
Q Consensus 105 ~~~~~~~~~~L~~l---~~~~~i~s~~~~~--------~~~~~l~~~gl~~~fd~i~-~~~~~~~~~~~~~~~~~~~~~~ 172 (274)
+.++||+.++|+.| |++++|+||.+.. .....++.+|+..+|.... ++++.+..
T Consensus 27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~-------------- 92 (173)
T PRK06769 27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCECR-------------- 92 (173)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCCCC--------------
Confidence 35788999998888 5899999998641 2334466677655443322 34444443
Q ss_pred cCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC------------CCCccccccC
Q 024023 173 FSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------------VPPADHALNS 240 (274)
Q Consensus 173 ~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~------------~~~a~~~~~~ 240 (274)
||+|+.+..++++++++|++|++|||+.+|+.+|+++|+.++++.++.. ...+++++.+
T Consensus 93 ---------KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~ 163 (173)
T PRK06769 93 ---------KPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIAEN 163 (173)
T ss_pred ---------CCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchhhC
Confidence 9999999999999999999999999999999999999999999988652 2458899999
Q ss_pred HhHHHHHH
Q 024023 241 IHNIKEAI 248 (274)
Q Consensus 241 l~~l~~~l 248 (274)
+.+|.++|
T Consensus 164 ~~el~~~l 171 (173)
T PRK06769 164 FEDAVNWI 171 (173)
T ss_pred HHHHHHHH
Confidence 99998754
No 50
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.79 E-value=1.3e-18 Score=153.28 Aligned_cols=131 Identities=14% Similarity=0.090 Sum_probs=96.2
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 104 KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
.+++.||+.++++.| +++++|+|++........++++|+...+...+...+. . -++.+.+..+.
T Consensus 179 ~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg------------~-ltg~v~g~iv~ 245 (322)
T PRK11133 179 NLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDG------------K-LTGNVLGDIVD 245 (322)
T ss_pred hCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECC------------E-EEeEecCccCC
Confidence 467899999988877 5899999999999899999999886554322211100 0 01111222234
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCCccccccCHhHHHHHH
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAI 248 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l 248 (274)
+|||++.++.+++++|++++++++|||+.||+.|++.+|+++++.....-+..|+++++ ..+|..+|
T Consensus 246 ~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~nAkp~Vk~~Ad~~i~-~~~l~~~l 312 (322)
T PRK11133 246 AQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAYHAKPKVNEQAQVTIR-HADLMGVL 312 (322)
T ss_pred cccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEeCCCHHHHhhCCEEec-CcCHHHHH
Confidence 58999999999999999999999999999999999999999887333333677888886 44454443
No 51
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.78 E-value=2.4e-18 Score=143.13 Aligned_cols=183 Identities=15% Similarity=0.227 Sum_probs=124.6
Q ss_pred CCCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcC----------c-----HHHH--
Q 024023 18 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGT----------T-----MAGL-- 80 (274)
Q Consensus 18 ~~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~----------~-----~~~~-- 80 (274)
.+++|+|+||++|||+...+.....+.+ +.+.+|++... ......+.+.+.. . ....
T Consensus 4 ~~~iravtfD~~~tLl~~~~~~~~~y~~-----i~~~~gl~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~~ww~ 77 (237)
T KOG3085|consen 4 LMRIRAVTFDAGGTLLATLPPVMEVYCE-----IAEAYGLEYDD-SLIETIFRKDFKKMSEKGPFFGLYSGELTLSQWWP 77 (237)
T ss_pred ccceEEEEEeCCCceeecCCccHHHHHH-----HHHHhCCCCCH-HHHhHhhhHHHHhhcccCCcccccCCcccHHHHHH
Confidence 3578999999999999755555555553 67777877443 2222222222210 0 0000
Q ss_pred -------HHhcCCCChHHHHHHHhccCCC---CCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHcCCCCccc
Q 024023 81 -------KAVGYEFDNDEFHAFVHGKLPY---EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFE 147 (274)
Q Consensus 81 -------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~L~~l~---~~~~i~s~~~~~~~~~~l~~~gl~~~fd 147 (274)
...+.....+....+....+.. ......+++.++++.++ ..+.++||.+...- ..+..+|+..+||
T Consensus 78 ~lv~~~f~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~~-~~l~~~~l~~~fD 156 (237)
T KOG3085|consen 78 KLVESTFGKAGIDYEEELLENFSFRLFSTFAPSAWKYLDGMQELLQKLRKKGTILGIISNFDDRLR-LLLLPLGLSAYFD 156 (237)
T ss_pred HHHHHHhccccchhHHHHHhhhhhheeccccccCceeccHHHHHHHHHHhCCeEEEEecCCcHHHH-HHhhccCHHHhhh
Confidence 0001111111111111111111 23455677778888884 56778888776654 7888899999999
Q ss_pred eeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEEC
Q 024023 148 GIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVG 226 (274)
Q Consensus 148 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~ 226 (274)
.++.+.+.+.. ||+|.+|..+++.+|+.|++|++|||+. ||+++|+++||+++.+.
T Consensus 157 ~vv~S~e~g~~-----------------------KPDp~If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~ 213 (237)
T KOG3085|consen 157 FVVESCEVGLE-----------------------KPDPRIFQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVD 213 (237)
T ss_pred hhhhhhhhccC-----------------------CCChHHHHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEc
Confidence 99999999986 9999999999999999999999999999 89999999999999997
Q ss_pred CCCC
Q 024023 227 SSVP 230 (274)
Q Consensus 227 ~~~~ 230 (274)
++..
T Consensus 214 ~~~~ 217 (237)
T KOG3085|consen 214 NSIT 217 (237)
T ss_pred cccc
Confidence 6654
No 52
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=99.78 E-value=2.2e-18 Score=139.84 Aligned_cols=127 Identities=17% Similarity=0.154 Sum_probs=95.2
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCCh---------------HHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCC
Q 024023 105 LKPDPVLRNLLLSM---PQRKIIFTNADQ---------------KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTD 166 (274)
Q Consensus 105 ~~~~~~~~~~L~~l---~~~~~i~s~~~~---------------~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~ 166 (274)
+.++||+.++|+.| |++++|+||.+. ......+...++. |+.++.+.....
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~~~~~--------- 93 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCPHHPE--------- 93 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECCCCCc---------
Confidence 45778999998888 488999999874 3334556666666 777665432110
Q ss_pred cccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeE-EEECCCCC-----CCCccccccC
Q 024023 167 GIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT-VIVGSSVP-----VPPADHALNS 240 (274)
Q Consensus 167 ~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~-v~v~~~~~-----~~~a~~~~~~ 240 (274)
....++.....+||+|+++..+++++|++++++++|||+.+|+++|+++|+.+ +++.++.. ...+++++++
T Consensus 94 ---~~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~ 170 (176)
T TIGR00213 94 ---GVEEFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNS 170 (176)
T ss_pred ---ccccccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEecc
Confidence 00011112223599999999999999999999999999999999999999998 78888764 2468999999
Q ss_pred HhHHH
Q 024023 241 IHNIK 245 (274)
Q Consensus 241 l~~l~ 245 (274)
+.+|.
T Consensus 171 ~~el~ 175 (176)
T TIGR00213 171 LADLP 175 (176)
T ss_pred HHHhh
Confidence 99885
No 53
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.78 E-value=3.7e-18 Score=141.64 Aligned_cols=195 Identities=13% Similarity=0.087 Sum_probs=124.0
Q ss_pred ccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHH-HHHHHHHhcCcHHHHHHhcCCCChHHHHHHHhcc
Q 024023 21 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRM-CLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGK 99 (274)
Q Consensus 21 ~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (274)
+++|+|||||||++ . .|. .+.++.|.+....... ...+...++.....+.. ...+.+.+...+
T Consensus 1 ~~~v~FD~DGTL~~-~-~~~---------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~i~~~~--- 64 (205)
T PRK13582 1 MEIVCLDLEGVLVP-E-IWI---------AFAEKTGIPELRATTRDIPDYDVLMKQRLDILDE--HGLGLADIQEVI--- 64 (205)
T ss_pred CeEEEEeCCCCChh-h-HHH---------HHHHHcCChHHHHHhcCCCCHHHHHHHHHHHHHH--cCCCHHHHHHHH---
Confidence 37899999999995 2 221 1445666643210000 00011112222222221 123455555544
Q ss_pred CCCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCccc
Q 024023 100 LPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQ 177 (274)
Q Consensus 100 ~~~~~~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (274)
..+.++||+.++|+.++ .+++|+|++....+...++.+|+..+|+..+...+.+.. .+.
T Consensus 65 ---~~~~~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~i---------------~~~- 125 (205)
T PRK13582 65 ---ATLDPLPGAVEFLDWLRERFQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGMI---------------TGY- 125 (205)
T ss_pred ---HhCCCCCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCeE---------------ECc-
Confidence 34678999999999885 688999999999999999999999888765544321100 000
Q ss_pred ccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccc-cccCHhHHHHHHHHHHhh
Q 024023 178 RILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADH-ALNSIHNIKEAIPEIWEG 254 (274)
Q Consensus 178 ~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~-~~~~l~~l~~~l~~~~~~ 254 (274)
.+++|.....++++++..++++++||||.+|+.+++++|++.. +..+.. ...+++ +++++.+|..++.++...
T Consensus 126 ---~~~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~-~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~~ 201 (205)
T PRK13582 126 ---DLRQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGIL-FRPPANVIAEFPQFPAVHTYDELLAAIDKASAR 201 (205)
T ss_pred ---cccccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEE-ECCCHHHHHhCCcccccCCHHHHHHHHHHHHhh
Confidence 0233344566666777778999999999999999999998765 333332 234555 899999999888776543
No 54
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.76 E-value=3.8e-18 Score=143.22 Aligned_cols=126 Identities=13% Similarity=0.089 Sum_probs=92.2
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCC--cc--ceeEecccCCCCCCCCCCCCcccccccCc
Q 024023 103 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLED--CF--EGIICFETINPRLQPADNTDGIENNSFSS 175 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~--~f--d~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (274)
....++||+.++|+.+ +.+++|+|++....+..+++.+ +.. .+ +..++++....
T Consensus 71 ~~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~------------------ 131 (219)
T PRK09552 71 ETAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITI------------------ 131 (219)
T ss_pred hCCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEE------------------
Confidence 3467899999998887 5899999999999999999987 643 11 22233332222
Q ss_pred ccccCCCCCHHH----------HHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECC--C--CCCCCccccccCH
Q 024023 176 NQRILCKPSLEA----------IETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGS--S--VPVPPADHALNSI 241 (274)
Q Consensus 176 ~~~~~~kp~~~~----------~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~--~--~~~~~a~~~~~~l 241 (274)
.||.|.. ...++++++..++++++||||.+|+.+|+++|+.++ -.. . .....+.+.++++
T Consensus 132 -----~kp~p~~~~~~~~~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a-~~~l~~~~~~~~~~~~~~~~f 205 (219)
T PRK09552 132 -----TWPHPCDEHCQNHCGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA-RDFLITKCEELGIPYTPFETF 205 (219)
T ss_pred -----eccCCccccccccCCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee-HHHHHHHHHHcCCCccccCCH
Confidence 2554432 346888899999999999999999999999999544 111 0 0244577889999
Q ss_pred hHHHHHHHHHHh
Q 024023 242 HNIKEAIPEIWE 253 (274)
Q Consensus 242 ~~l~~~l~~~~~ 253 (274)
.++.+.|+.+++
T Consensus 206 ~ei~~~l~~~~~ 217 (219)
T PRK09552 206 HDVQTELKHLLE 217 (219)
T ss_pred HHHHHHHHHHhc
Confidence 999999888765
No 55
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=99.76 E-value=6.3e-17 Score=135.20 Aligned_cols=103 Identities=17% Similarity=0.212 Sum_probs=88.5
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHc---CCCCccceeEecccCCCCCCCCCCCCcccccccCcc
Q 024023 103 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRL---GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSN 176 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~---gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (274)
....++||+.++|+.| |.+++|+||++.......++.. ++..+|+.++.. ..+
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~-~~g-------------------- 150 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDT-TVG-------------------- 150 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEe-Ccc--------------------
Confidence 3457999999999998 5889999999999888888775 577778877643 222
Q ss_pred cccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC
Q 024023 177 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP 230 (274)
Q Consensus 177 ~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~ 230 (274)
.||+|+.+..+++++|++|+++++|||+..|+.+|+++|+.++++.++.+
T Consensus 151 ----~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g~ 200 (220)
T TIGR01691 151 ----LKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQLVRPGN 200 (220)
T ss_pred ----cCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEEEECCCC
Confidence 39999999999999999999999999999999999999999999876654
No 56
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=99.76 E-value=1.6e-17 Score=137.66 Aligned_cols=193 Identities=19% Similarity=0.184 Sum_probs=143.4
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHH-----HHhcCCCChHHHH
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL-----KAVGYEFDNDEFH 93 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 93 (274)
..+.+++||+||||+|++..+...+.+ +..++|.+.+. . ...+..|...... .....+.+.+++.
T Consensus 8 ~~~~~~lfD~dG~lvdte~~y~~~~~~-----~~~~ygk~~~~-~----~~~~~mG~~~~eaa~~~~~~~~dp~s~ee~~ 77 (222)
T KOG2914|consen 8 LKVSACLFDMDGTLVDTEDLYTEAWQE-----LLDRYGKPYPW-D----VKVKSMGKRTSEAARLFVKKLPDPVSREEFN 77 (222)
T ss_pred cceeeEEEecCCcEEecHHHHHHHHHH-----HHHHcCCCChH-H----HHHHHcCCCHHHHHHHHHhhcCCCCCHHHHH
Confidence 357899999999999988888887775 77788874432 1 2222344433222 2234566666665
Q ss_pred HHHhccCC--CCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcC-CCCccceeEe--cccCCCCCCCCCCC
Q 024023 94 AFVHGKLP--YEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLG-LEDCFEGIIC--FETINPRLQPADNT 165 (274)
Q Consensus 94 ~~~~~~~~--~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~g-l~~~fd~i~~--~~~~~~~~~~~~~~ 165 (274)
...+.... .....+.||+.++++.| +.++.++|+.+.......+++++ +...|+.++. .+++..
T Consensus 78 ~e~~~~~~~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~-------- 149 (222)
T KOG2914|consen 78 KEEEEILDRLFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKN-------- 149 (222)
T ss_pred HHHHHHHHHhccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccccC--------
Confidence 44333221 35678889999999988 48899999999988888888876 6677888777 344444
Q ss_pred CcccccccCcccccCCCCCHHHHHHHHHHhCCCC-CeEEEEcCChhcHHHHHHcCCeEEEECCCCC----CCCccccccC
Q 024023 166 DGIENNSFSSNQRILCKPSLEAIETAIRIANVDP-KKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNS 240 (274)
Q Consensus 166 ~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~-~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~----~~~a~~~~~~ 240 (274)
+||.|++|..+++.+|..+ +.|++++|++..+++|+++|++++++++..- ..+++.++++
T Consensus 150 ---------------gKP~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~~~~~~~~~~~~~~~~~ 214 (222)
T KOG2914|consen 150 ---------------GKPDPDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATPDLSNLFSAGATLILES 214 (222)
T ss_pred ---------------CCCCchHHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEEecCCCcchhhhhccceeccc
Confidence 5999999999999999998 9999999999999999999999999988432 4556666666
Q ss_pred HhHH
Q 024023 241 IHNI 244 (274)
Q Consensus 241 l~~l 244 (274)
+.+.
T Consensus 215 ~~~~ 218 (222)
T KOG2914|consen 215 LEDF 218 (222)
T ss_pred cccc
Confidence 6554
No 57
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.75 E-value=4.2e-18 Score=134.12 Aligned_cols=100 Identities=22% Similarity=0.283 Sum_probs=79.0
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCCh---------------HHHHHHHHHcCCCCc--cceeE-ecccCCCCCCCCCC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQ---------------KHAMEVLGRLGLEDC--FEGII-CFETINPRLQPADN 164 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~---------------~~~~~~l~~~gl~~~--fd~i~-~~~~~~~~~~~~~~ 164 (274)
.++||+.++|+.| +++++|+||.+. ..+...++.+|+... |.... +++..+.
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~------- 99 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNCSC------- 99 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCCCC-------
Confidence 4678888888887 589999999873 456677888888621 11111 1233333
Q ss_pred CCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCC
Q 024023 165 TDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS 228 (274)
Q Consensus 165 ~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~ 228 (274)
.||+|+++..+++++|+++++|++|||+..|+++|+++|+.+++++.|
T Consensus 100 ----------------~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 100 ----------------RKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVDG 147 (147)
T ss_pred ----------------CCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEEecCC
Confidence 399999999999999999999999999999999999999999998764
No 58
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.72 E-value=8.6e-18 Score=135.01 Aligned_cols=104 Identities=17% Similarity=0.247 Sum_probs=89.5
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCC-ChHHHHHHHHHcCCC---------CccceeEecccCCCCCCCCCCCCccc
Q 024023 103 EKLKPDPVLRNLLLSM---PQRKIIFTNA-DQKHAMEVLGRLGLE---------DCFEGIICFETINPRLQPADNTDGIE 169 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l---~~~~~i~s~~-~~~~~~~~l~~~gl~---------~~fd~i~~~~~~~~~~~~~~~~~~~~ 169 (274)
....++||+.++|+.| |.+++|+|+. ....++..++.+|+. ++|+.++++++....
T Consensus 42 ~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~----------- 110 (174)
T TIGR01685 42 TEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNKA----------- 110 (174)
T ss_pred CEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCchH-----------
Confidence 4567899999999988 4789999998 888889999999998 999999998875432
Q ss_pred ccccCcccccCCCCCHHHHHHHHHHh--CCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 170 NNSFSSNQRILCKPSLEAIETAIRIA--NVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 170 ~~~~~~~~~~~~kp~~~~~~~~l~~~--g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
||.+..++.+.+.+ |++|++|+||||+..|+.+|+++|+.++++.++.
T Consensus 111 ------------kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~g~ 160 (174)
T TIGR01685 111 ------------KQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPSGM 160 (174)
T ss_pred ------------HHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCCCc
Confidence 66667777776666 7999999999999999999999999999998864
No 59
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.72 E-value=8.4e-17 Score=133.84 Aligned_cols=193 Identities=14% Similarity=0.116 Sum_probs=131.1
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHH---HhcCcHHHHHHhcCCCChHHHHHH
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYR---EHGTTMAGLKAVGYEFDNDEFHAF 95 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 95 (274)
++.++++|||||||++ ...+. .+.+..|........ ...... .+..........-...+.+.+.++
T Consensus 3 ~~~~L~vFD~D~TLi~-~~~~~---------~~~~~~g~~~~v~~~-t~~~~~~~~~~~~~~~~~v~~l~g~~~~~v~~~ 71 (212)
T COG0560 3 RMKKLAVFDLDGTLIN-AELID---------ELARGAGVGEEVLAI-TERAMRGELDFEESLRLRVALLKGLPVEVLEEV 71 (212)
T ss_pred CccceEEEecccchhh-HHHHH---------HHHHHhCCHHHHHHH-HHHHhcccccHHHHHHHHHHHhCCCCHHHHHHH
Confidence 3568999999999999 21111 134444443321111 111111 011111111112223344455554
Q ss_pred HhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccc
Q 024023 96 VHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNS 172 (274)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~ 172 (274)
..+. .++.|++.++++.+ |.+++|+|++....+..+.+.+|++..+...+..++ +. .++
T Consensus 72 ~~~~-----~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~d-G~------------ltG 133 (212)
T COG0560 72 REEF-----LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDD-GK------------LTG 133 (212)
T ss_pred HHhc-----CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeC-CE------------Eec
Confidence 4321 67888988887777 699999999999999999999999988888777776 42 567
Q ss_pred cCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCCccccccC
Q 024023 173 FSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNS 240 (274)
Q Consensus 173 ~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~a~~~~~~ 240 (274)
...+..+.++.|...+.++++++|+++++++++|||.||+.|.+.+|.+.+..+.+.-...++.....
T Consensus 134 ~v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~l~~~a~~~~~~ 201 (212)
T COG0560 134 RVVGPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPKLRALADVRIWP 201 (212)
T ss_pred eeeeeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHHHHHHHHHhcCh
Confidence 77777888888999999999999999999999999999999999999998766554433333333333
No 60
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.72 E-value=2e-16 Score=133.32 Aligned_cols=98 Identities=17% Similarity=0.144 Sum_probs=80.9
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCC----ChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCc
Q 024023 103 EKLKPDPVLRNLLLSM---PQRKIIFTNA----DQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSS 175 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l---~~~~~i~s~~----~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (274)
....+.+++.++|+.+ |.+++++||. ....+..+++.+|+..+|+.++++++....
T Consensus 111 ~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~----------------- 173 (237)
T TIGR01672 111 EFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQY----------------- 173 (237)
T ss_pred cCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCCC-----------------
Confidence 3446777799998888 5889999998 666888888999999999999998876543
Q ss_pred ccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC
Q 024023 176 NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP 230 (274)
Q Consensus 176 ~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~ 230 (274)
||++. .+++++|+ +++|||+.+|+.+|+++|+.++.+.|+..
T Consensus 174 ------Kp~~~---~~l~~~~i----~i~vGDs~~DI~aAk~AGi~~I~V~~g~~ 215 (237)
T TIGR01672 174 ------QYTKT---QWIQDKNI----RIHYGDSDNDITAAKEAGARGIRILRASN 215 (237)
T ss_pred ------CCCHH---HHHHhCCC----eEEEeCCHHHHHHHHHCCCCEEEEEecCC
Confidence 77664 45677776 79999999999999999999999987764
No 61
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=99.71 E-value=6.9e-17 Score=128.77 Aligned_cols=100 Identities=17% Similarity=0.368 Sum_probs=85.6
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCC---------------hHHHHHHHHHcCCCCccceeE-e----cccCCCCCCC
Q 024023 105 LKPDPVLRNLLLSM---PQRKIIFTNAD---------------QKHAMEVLGRLGLEDCFEGII-C----FETINPRLQP 161 (274)
Q Consensus 105 ~~~~~~~~~~L~~l---~~~~~i~s~~~---------------~~~~~~~l~~~gl~~~fd~i~-~----~~~~~~~~~~ 161 (274)
+.++||+.++|+.| |++++|+||.+ ...+...++.+|+. |+.++ + +++...+
T Consensus 28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~~~--- 102 (161)
T TIGR01261 28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDNCDCR--- 102 (161)
T ss_pred eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCCCCCC---
Confidence 46788999998888 48899999963 45677788999997 87665 4 3555554
Q ss_pred CCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 162 ADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
||+++.+..++++++++++++++|||+.+|+.+|+++|++++++.+++
T Consensus 103 --------------------KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~~ 150 (161)
T TIGR01261 103 --------------------KPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYDEEE 150 (161)
T ss_pred --------------------CCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEEChhh
Confidence 999999999999999999999999999999999999999999998765
No 62
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.70 E-value=1.4e-16 Score=123.00 Aligned_cols=94 Identities=21% Similarity=0.355 Sum_probs=78.7
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCC--------hHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNAD--------QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFS 174 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~--------~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (274)
.++|++.++|+.| |++++++||++ ...+...++.+|+. ++.++.+. +.
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~--~~----------------- 83 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP--IDVLYACP--HC----------------- 83 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC--EEEEEECC--CC-----------------
Confidence 4667788877776 58999999998 77888899999986 34444333 33
Q ss_pred cccccCCCCCHHHHHHHHHHh-CCCCCeEEEEcC-ChhcHHHHHHcCCeEEEEC
Q 024023 175 SNQRILCKPSLEAIETAIRIA-NVDPKKTIFFDD-SARNIASAKAAGLHTVIVG 226 (274)
Q Consensus 175 ~~~~~~~kp~~~~~~~~l~~~-g~~~~~~i~VGD-s~~Di~~a~~~G~~~v~v~ 226 (274)
.||+++.+..+++++ +++|+++++||| +.+|+.+|+++|+.++++.
T Consensus 84 ------~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~ 131 (132)
T TIGR01662 84 ------RKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAFILVA 131 (132)
T ss_pred ------CCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence 399999999999999 599999999999 6899999999999999875
No 63
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.70 E-value=4e-16 Score=129.10 Aligned_cols=141 Identities=11% Similarity=0.088 Sum_probs=95.4
Q ss_pred CCChHHHHHHHhccCCCCCCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCC
Q 024023 86 EFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPAD 163 (274)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~ 163 (274)
..+.+.+.+.+ ..++++||+.++++.++ .+++|+|++....+..+++.+|+..+|...+..++.+.
T Consensus 54 g~~~~~i~~~~------~~i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~------ 121 (203)
T TIGR02137 54 GLKLGDIQEVI------ATLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDR------ 121 (203)
T ss_pred CCCHHHHHHHH------HhCCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCe------
Confidence 44556665554 34578999999999884 58999999999999999999999887764322221010
Q ss_pred CCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccccCH
Q 024023 164 NTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSI 241 (274)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~~l 241 (274)
..+.....++.+......+++.|. ++++||||.||+.+++.+|.++++...+.- .+.---++.+.
T Consensus 122 ----------~tG~~~~~~~~K~~~l~~l~~~~~---~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~~~~~~ 188 (203)
T TIGR02137 122 ----------VVGYQLRQKDPKRQSVIAFKSLYY---RVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVHTY 188 (203)
T ss_pred ----------eECeeecCcchHHHHHHHHHhhCC---CEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCCcccCH
Confidence 000000124444434444456553 799999999999999999999887765443 33333457788
Q ss_pred hHHHHHHHHH
Q 024023 242 HNIKEAIPEI 251 (274)
Q Consensus 242 ~~l~~~l~~~ 251 (274)
++|...+...
T Consensus 189 ~~~~~~~~~~ 198 (203)
T TIGR02137 189 EDLKREFLKA 198 (203)
T ss_pred HHHHHHHHHH
Confidence 8888776655
No 64
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=99.68 E-value=1.2e-15 Score=124.48 Aligned_cols=120 Identities=15% Similarity=0.125 Sum_probs=85.4
Q ss_pred CChHHHHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCC
Q 024023 87 FDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPAD 163 (274)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~ 163 (274)
...+.+...+. .++++|++.++|+.| +.+++|+|++....+...++.+|+.++|+.+++++.....
T Consensus 59 ~~~~~~~~~~~------~~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~----- 127 (188)
T TIGR01489 59 LKEDEILEVLK------SAPIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDN----- 127 (188)
T ss_pred CCHHHHHHHHH------hCCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECC-----
Confidence 34445555542 357889999998887 5889999999999999999999999999999987542210
Q ss_pred CCCcccccccCc----ccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeE
Q 024023 164 NTDGIENNSFSS----NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT 222 (274)
Q Consensus 164 ~~~~~~~~~~~~----~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~ 222 (274)
+++....... .....+.+|++.++++++++ ++++++|||+.+|+.+|+++++-+
T Consensus 128 --~g~~~~~~~~~~~~~~~~~g~~K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~~ 185 (188)
T TIGR01489 128 --DGRHIVWPHHCHGCCSCPCGCCKGKVIHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVVF 185 (188)
T ss_pred --CCcEEEecCCCCccCcCCCCCCHHHHHHHHHhhc---CceEEEECCCcchhchHhcCCccc
Confidence 0111100000 01223456788888888765 799999999999999999987644
No 65
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.66 E-value=5.6e-16 Score=118.95 Aligned_cols=116 Identities=27% Similarity=0.362 Sum_probs=92.3
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCccccc
Q 024023 103 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 179 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (274)
....+++++.++|+.| +.+++++|++....+...++.+|+..+++.+++.+..... ..............
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~~~~~~~~~~~~ 93 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIY-------YPKEGLFLGGGPFD 93 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhh-------cccccccccccccc
Confidence 4567888999988888 4789999999999999999999998888888877644321 00001112233344
Q ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEE
Q 024023 180 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 225 (274)
Q Consensus 180 ~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v 225 (274)
.+||++..+..++++++..++++++|||+.+|+.+++++|+.++++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v 139 (139)
T cd01427 94 IGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139 (139)
T ss_pred cCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence 5599999999999999999999999999999999999999998864
No 66
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=99.66 E-value=2.6e-15 Score=124.18 Aligned_cols=109 Identities=12% Similarity=0.095 Sum_probs=87.1
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccce-eEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 105 LKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEG-IICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 105 ~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
..++|++.++++.+ +.+++|+|++....++.+++.+|+..+|.. +...++ +. .++...+..+.
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~-g~------------~~g~~~~~~~~ 152 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESED-GI------------YTGNIDGNNCK 152 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCC-CE------------EeCCccCCCCC
Confidence 36789999998876 588999999999999999999999877655 222121 11 23444445567
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEEC
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG 226 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~ 226 (274)
+++|...+..++++.++++++++++|||.+|+++++.+|..++..+
T Consensus 153 g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 153 GEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNP 198 (202)
T ss_pred ChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCC
Confidence 8889999999999999999999999999999999999998876443
No 67
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=99.66 E-value=5.2e-16 Score=124.43 Aligned_cols=93 Identities=20% Similarity=0.189 Sum_probs=77.3
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCChH------------HHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCccccc
Q 024023 107 PDPVLRNLLLSM---PQRKIIFTNADQK------------HAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENN 171 (274)
Q Consensus 107 ~~~~~~~~L~~l---~~~~~i~s~~~~~------------~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~ 171 (274)
++||+.++|+.| |++++|+||++.. .+...++.+|+. ++.++++++...
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~--~~~ii~~~~~~~-------------- 106 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP--IQVLAATHAGLY-------------- 106 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC--EEEEEecCCCCC--------------
Confidence 578888888887 5889999998763 467788999985 356666654433
Q ss_pred ccCcccccCCCCCHHHHHHHHHHhC--CCCCeEEEEcCCh--------hcHHHHHHcCCeEEE
Q 024023 172 SFSSNQRILCKPSLEAIETAIRIAN--VDPKKTIFFDDSA--------RNIASAKAAGLHTVI 224 (274)
Q Consensus 172 ~~~~~~~~~~kp~~~~~~~~l~~~g--~~~~~~i~VGDs~--------~Di~~a~~~G~~~v~ 224 (274)
+||+|+.+..+++++| ++++++++|||+. +|+++|+++|+.+++
T Consensus 107 ---------~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 107 ---------RKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY 160 (166)
T ss_pred ---------CCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence 3999999999999999 9999999999996 699999999999875
No 68
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=99.64 E-value=3.4e-15 Score=124.85 Aligned_cols=125 Identities=13% Similarity=0.084 Sum_probs=87.0
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCcc---ceeEecccCCCCCCCCCCCCcccccccCccc
Q 024023 104 KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCF---EGIICFETINPRLQPADNTDGIENNSFSSNQ 177 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~f---d~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (274)
...++||+.++++.+ +.+++|+|++....+..+++.++....+ +.++..+.+..
T Consensus 68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~-------------------- 127 (214)
T TIGR03333 68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHI-------------------- 127 (214)
T ss_pred cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEE--------------------
Confidence 367889999998888 5889999999999999999887543222 12222222211
Q ss_pred ccCCCCCHHHH----------HHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCC-----CCCCCccccccCHh
Q 024023 178 RILCKPSLEAI----------ETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS-----VPVPPADHALNSIH 242 (274)
Q Consensus 178 ~~~~kp~~~~~----------~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~-----~~~~~a~~~~~~l~ 242 (274)
.+|.+..+ ..++++++..++++++||||.+|+.+|+.+|+.++ ... .....+...++++.
T Consensus 128 ---~~p~~~~~~~~~~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~a--r~~l~~~~~~~~~~~~~~~~f~ 202 (214)
T TIGR03333 128 ---DWPHPCDGTCQNQCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFA--RDYLLNECEELGLNHAPFQDFY 202 (214)
T ss_pred ---eCCCCCccccccCCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEe--hHHHHHHHHHcCCCccCcCCHH
Confidence 24444332 46667777788999999999999999999998333 211 12333667789999
Q ss_pred HHHHHHHHHHh
Q 024023 243 NIKEAIPEIWE 253 (274)
Q Consensus 243 ~l~~~l~~~~~ 253 (274)
|+.++|+++++
T Consensus 203 di~~~l~~~~~ 213 (214)
T TIGR03333 203 DVRKELENVKE 213 (214)
T ss_pred HHHHHHHHHhc
Confidence 99988887653
No 69
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=99.64 E-value=6.9e-16 Score=132.49 Aligned_cols=121 Identities=14% Similarity=0.201 Sum_probs=90.0
Q ss_pred ChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCC
Q 024023 108 DPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPS 184 (274)
Q Consensus 108 ~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~ 184 (274)
++++.+.++.+ +.+++++||.+.......+..+|...+|+.+.+..... ....+||+
T Consensus 122 y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~~~~~i~~~~~~~--------------------~~~~gKP~ 181 (257)
T TIGR01458 122 YQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGPFVTALEYATDTK--------------------ATVVGKPS 181 (257)
T ss_pred HHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchHHHHHHHHHhCCC--------------------ceeecCCC
Confidence 45666655555 25567777776665554445556666666555433221 11236999
Q ss_pred HHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCC--------CCCccccccCHhHHHHHH
Q 024023 185 LEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNIKEAI 248 (274)
Q Consensus 185 ~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~--------~~~a~~~~~~l~~l~~~l 248 (274)
|.++..+++++|++|+++++|||+. +|+.+|+++|+.++++.+|.. ...++++++++.+|.+++
T Consensus 182 p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~l 254 (257)
T TIGR01458 182 KTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDLI 254 (257)
T ss_pred HHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHHH
Confidence 9999999999999999999999997 999999999999999988742 346899999999998754
No 70
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=99.61 E-value=1.5e-14 Score=117.02 Aligned_cols=103 Identities=17% Similarity=0.170 Sum_probs=79.0
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcc-ccc
Q 024023 104 KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSN-QRI 179 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 179 (274)
.+.+.|++.++++.+ +.+++|+|++....+...++.+|+..+|...+..++.+. .++.... ...
T Consensus 71 ~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~------------~~g~~~~~~~~ 138 (177)
T TIGR01488 71 QVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGL------------LTGPIEGQVNP 138 (177)
T ss_pred cCCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCE------------EeCccCCcccC
Confidence 345789999998877 588999999999999999999999877766555532221 1111111 234
Q ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHc
Q 024023 180 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA 218 (274)
Q Consensus 180 ~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~ 218 (274)
.+..|+..+..++++.|++++++++||||.+|+.+++.+
T Consensus 139 ~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 139 EGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred CcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 457778899999999999999999999999999998754
No 71
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.60 E-value=5.5e-15 Score=117.23 Aligned_cols=111 Identities=18% Similarity=0.231 Sum_probs=89.2
Q ss_pred HHHHHHhCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHH
Q 024023 111 LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIET 190 (274)
Q Consensus 111 ~~~~L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~ 190 (274)
+.+.|+.-+.+++|+|+.+...+...++.+|+..+|+. .+|+++.+..
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~~--------------------------------~~~k~~~~~~ 83 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQG--------------------------------QSNKLIAFSD 83 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEec--------------------------------ccchHHHHHH
Confidence 44556666799999999999999999999999877642 1788999999
Q ss_pred HHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccccCHhH---HHHHHHHHHhh
Q 024023 191 AIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN---IKEAIPEIWEG 254 (274)
Q Consensus 191 ~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~~l~~---l~~~l~~~~~~ 254 (274)
+++++|++++++++|||+.+|+.+++++|+. +.+.+... +..+++++.+-.. +.++++++...
T Consensus 84 ~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~-~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~~~~~~~ 151 (154)
T TIGR01670 84 ILEKLALAPENVAYIGDDLIDWPVMEKVGLS-VAVADAHPLLIPRADYVTRIAGGRGAVREVCELLLLA 151 (154)
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCe-EecCCcCHHHHHhCCEEecCCCCCcHHHHHHHHHHHh
Confidence 9999999999999999999999999999998 55554433 5567888776654 66666666543
No 72
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=99.59 E-value=1.8e-14 Score=116.14 Aligned_cols=93 Identities=19% Similarity=0.260 Sum_probs=76.1
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCC-hHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNAD-QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 181 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~-~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (274)
.++|++.++|+.| +.+++|+||++ ...+..+++.+|+..++ +. .
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~~---------~~-----------------------~ 90 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVLP---------HA-----------------------V 90 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEEc---------CC-----------------------C
Confidence 3456677666666 58899999998 56677777777764321 12 3
Q ss_pred CCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCC
Q 024023 182 KPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP 230 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~ 230 (274)
||+|+.+..+++++|++++++++|||+. +|+.+|+++|+.++++.++..
T Consensus 91 KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~~g~~ 140 (170)
T TIGR01668 91 KPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILVEPLVH 140 (170)
T ss_pred CCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEEccCcC
Confidence 9999999999999999999999999998 799999999999999988774
No 73
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=99.59 E-value=2.1e-14 Score=120.89 Aligned_cols=109 Identities=17% Similarity=0.203 Sum_probs=84.8
Q ss_pred hHHHHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCC----hHHHHHHHHHcCC--CCccceeEecccCCCCC
Q 024023 89 NDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNAD----QKHAMEVLGRLGL--EDCFEGIICFETINPRL 159 (274)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~----~~~~~~~l~~~gl--~~~fd~i~~~~~~~~~~ 159 (274)
.+.+++++.+.. .....|+||+.++|+.+ |.+++++|+.+ ......+++.+|+ .++|+.++++++. .
T Consensus 98 ~~~fw~~y~~~~-~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--~- 173 (237)
T PRK11009 98 NQKFWEKMNNGW-DEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--G- 173 (237)
T ss_pred hHHHHHHHHhcc-cccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC--C-
Confidence 456666665542 34578999999999988 58899999954 4466677777999 7889888887753 2
Q ss_pred CCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC
Q 024023 160 QPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP 230 (274)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~ 230 (274)
||.+. .+++++++ +++|||+.+|+.+|+++|+.++.+.|+..
T Consensus 174 ----------------------K~~K~---~~l~~~~i----~I~IGDs~~Di~aA~~AGi~~I~v~~G~~ 215 (237)
T PRK11009 174 ----------------------QYTKT---QWLKKKNI----RIFYGDSDNDITAAREAGARGIRILRAAN 215 (237)
T ss_pred ----------------------CCCHH---HHHHhcCC----eEEEcCCHHHHHHHHHcCCcEEEEecCCC
Confidence 66554 35566776 89999999999999999999999988775
No 74
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.58 E-value=3.3e-15 Score=121.86 Aligned_cols=105 Identities=17% Similarity=0.269 Sum_probs=85.2
Q ss_pred HHHHhCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHH
Q 024023 113 NLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAI 192 (274)
Q Consensus 113 ~~L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l 192 (274)
+.|+..+++++|+|+.+...+...++.+|+..+|+ + .+++++.+..++
T Consensus 58 ~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~----g----------------------------~~~k~~~l~~~~ 105 (183)
T PRK09484 58 RCLLTSGIEVAIITGRKSKLVEDRMTTLGITHLYQ----G----------------------------QSNKLIAFSDLL 105 (183)
T ss_pred HHHHHCCCEEEEEeCCCcHHHHHHHHHcCCceeec----C----------------------------CCcHHHHHHHHH
Confidence 33445678999999999999999999999877664 1 267789999999
Q ss_pred HHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCcccccc------CHhHHHHHHHH
Q 024023 193 RIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALN------SIHNIKEAIPE 250 (274)
Q Consensus 193 ~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~------~l~~l~~~l~~ 250 (274)
+++|+++++++||||+.+|+.+++++|+.++ +.+... ...+++++. .+.++.+.|..
T Consensus 106 ~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~-v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~ 170 (183)
T PRK09484 106 EKLAIAPEQVAYIGDDLIDWPVMEKVGLSVA-VADAHPLLLPRADYVTRIAGGRGAVREVCDLLLL 170 (183)
T ss_pred HHhCCCHHHEEEECCCHHHHHHHHHCCCeEe-cCChhHHHHHhCCEEecCCCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999954 544332 456888886 57787776553
No 75
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.58 E-value=2.3e-15 Score=120.67 Aligned_cols=95 Identities=15% Similarity=0.141 Sum_probs=81.0
Q ss_pred HHHHhCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHH
Q 024023 113 NLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAI 192 (274)
Q Consensus 113 ~~L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l 192 (274)
..|+..+.+++|+|+.+...++..++.+|+..+|+. .||+|+.+..++
T Consensus 44 ~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~~--------------------------------~kpkp~~~~~~~ 91 (169)
T TIGR02726 44 IVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHEG--------------------------------IKKKTEPYAQML 91 (169)
T ss_pred HHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEec--------------------------------CCCCHHHHHHHH
Confidence 556677899999999999999999999999877762 178899999999
Q ss_pred HHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-CCCcccccc
Q 024023 193 RIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALN 239 (274)
Q Consensus 193 ~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-~~~a~~~~~ 239 (274)
+++|++++++++|||+.||+.+++.+|++++..+.... +..++++..
T Consensus 92 ~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~ 139 (169)
T TIGR02726 92 EEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTT 139 (169)
T ss_pred HHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcC
Confidence 99999999999999999999999999999886654433 455666654
No 76
>PLN02645 phosphoglycolate phosphatase
Probab=99.57 E-value=1.5e-15 Score=133.93 Aligned_cols=73 Identities=16% Similarity=0.176 Sum_probs=64.8
Q ss_pred ccCCCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCC------C----CCccccccCHhHHHH
Q 024023 178 RILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP------V----PPADHALNSIHNIKE 246 (274)
Q Consensus 178 ~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~------~----~~a~~~~~~l~~l~~ 246 (274)
...+||+|.++..++++++++++++++|||+. +|+.+|+++|++++++.+|.. . ..++++++++.+|.+
T Consensus 226 ~~~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~~ 305 (311)
T PLN02645 226 LVVGKPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFLT 305 (311)
T ss_pred ccCCCChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHHH
Confidence 44579999999999999999999999999998 999999999999999988764 1 468999999999988
Q ss_pred HHHH
Q 024023 247 AIPE 250 (274)
Q Consensus 247 ~l~~ 250 (274)
+++.
T Consensus 306 ~~~~ 309 (311)
T PLN02645 306 LKAA 309 (311)
T ss_pred Hhhc
Confidence 6653
No 77
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=99.57 E-value=3.5e-15 Score=129.73 Aligned_cols=65 Identities=26% Similarity=0.358 Sum_probs=57.8
Q ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCC-----C---------CCccccccCHhHH
Q 024023 180 LCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP-----V---------PPADHALNSIHNI 244 (274)
Q Consensus 180 ~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~-----~---------~~a~~~~~~l~~l 244 (274)
.+||+|+.+..+++++|+++++++||||+. +||.+|+++|+.++++.||.. . ..|+++++++.+|
T Consensus 200 ~gKP~p~~~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 200 VGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL 279 (279)
T ss_pred cCCCCHHHHHHHHHHhCCChhhEEEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence 469999999999999999999999999995 999999999999999998864 1 3588999888764
No 78
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=99.54 E-value=5.8e-14 Score=124.63 Aligned_cols=99 Identities=17% Similarity=0.318 Sum_probs=81.6
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCC---------------ChHHHHHHHHHcCCCCccceeEec-----ccCCCCCC
Q 024023 104 KLKPDPVLRNLLLSM---PQRKIIFTNA---------------DQKHAMEVLGRLGLEDCFEGIICF-----ETINPRLQ 160 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l---~~~~~i~s~~---------------~~~~~~~~l~~~gl~~~fd~i~~~-----~~~~~~~~ 160 (274)
...++||+.++|+.| +++++|+||. ....+..+++.+|+. |+.++.+ ++...
T Consensus 28 ~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~--fd~i~i~~~~~sd~~~~--- 102 (354)
T PRK05446 28 KLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK--FDEVLICPHFPEDNCSC--- 102 (354)
T ss_pred cceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc--eeeEEEeCCcCcccCCC---
Confidence 357889999998888 4889999995 244566677888884 7766543 33333
Q ss_pred CCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECC
Q 024023 161 PADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGS 227 (274)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~ 227 (274)
+||+|..+..+++++++++++++||||+.+|+.+|+++|+++++++.
T Consensus 103 --------------------rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v~~ 149 (354)
T PRK05446 103 --------------------RKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRYAR 149 (354)
T ss_pred --------------------CCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEC
Confidence 49999999999999999999999999999999999999999999954
No 79
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=99.52 E-value=7.8e-14 Score=122.48 Aligned_cols=102 Identities=17% Similarity=0.153 Sum_probs=91.0
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCC-ccceeEeccc-------CCCCCCCCCCCCccccccc
Q 024023 105 LKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLED-CFEGIICFET-------INPRLQPADNTDGIENNSF 173 (274)
Q Consensus 105 ~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~-~fd~i~~~~~-------~~~~~~~~~~~~~~~~~~~ 173 (274)
..++|++.++|+.| |.+++++|+.+.......++.+++.+ +|+.+++.+. ...
T Consensus 186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~~~~~~~~---------------- 249 (300)
T PHA02530 186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMHFQREQGD---------------- 249 (300)
T ss_pred CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhhhcccCCC----------------
Confidence 46788999998888 58899999999999999999999997 8999988873 223
Q ss_pred CcccccCCCCCHHHHHHHHHHhCC-CCCeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 174 SSNQRILCKPSLEAIETAIRIANV-DPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 174 ~~~~~~~~kp~~~~~~~~l~~~g~-~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
+||+|+.+..++++++. .+++|++|||+.+|+.+|+++|+.++++.||.
T Consensus 250 -------~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g~ 299 (300)
T PHA02530 250 -------KRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPGD 299 (300)
T ss_pred -------CCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEecCCC
Confidence 49999999999999998 67999999999999999999999999998875
No 80
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.52 E-value=5.7e-14 Score=107.87 Aligned_cols=85 Identities=19% Similarity=0.178 Sum_probs=73.8
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCC-ChHHHHHHHHHcC-------CCCccceeEecccCCCCCCCCCCCCcccccccC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNA-DQKHAMEVLGRLG-------LEDCFEGIICFETINPRLQPADNTDGIENNSFS 174 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~-~~~~~~~~l~~~g-------l~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (274)
.++||+.++|+.| +++++|+|++ ....+...++..+ +..+|+.++++++
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~~-------------------- 88 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGYW-------------------- 88 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcCC--------------------
Confidence 5778999998888 5889999999 8888888889888 7888988887752
Q ss_pred cccccCCCCCHHHHHHHHHHhC--CCCCeEEEEcCChhcHHHHHH
Q 024023 175 SNQRILCKPSLEAIETAIRIAN--VDPKKTIFFDDSARNIASAKA 217 (274)
Q Consensus 175 ~~~~~~~kp~~~~~~~~l~~~g--~~~~~~i~VGDs~~Di~~a~~ 217 (274)
+|+|+.+..+++++| +.|++|++|||+..|+...+.
T Consensus 89 -------~pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 89 -------LPKSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred -------CcHHHHHHHHHHHhcCCCCcceEEEECCCHhHHHHHHh
Confidence 788999999999999 999999999999999877654
No 81
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=99.52 E-value=3e-13 Score=113.39 Aligned_cols=129 Identities=17% Similarity=0.254 Sum_probs=91.4
Q ss_pred CChHHHHHHHhccCCCCCCCCChhHHHHHHhC-----CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccC----CC
Q 024023 87 FDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM-----PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETI----NP 157 (274)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l-----~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~----~~ 157 (274)
...+.+.+.+ +.+++.||+.++++.+ +..++|+|++...++..+|+..|+.++|+.|++..-. |.
T Consensus 58 vt~~~I~~~l------~~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~ 131 (234)
T PF06888_consen 58 VTPEDIRDAL------RSIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADGR 131 (234)
T ss_pred CCHHHHHHHH------HcCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCce
Confidence 5677777666 5578899999999888 3779999999999999999999999999999886411 10
Q ss_pred C-CCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHh---CCCCCeEEEEcCChhcHHHHHHcCCe-EEEECCCC
Q 024023 158 R-LQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIA---NVDPKKTIFFDDSARNIASAKAAGLH-TVIVGSSV 229 (274)
Q Consensus 158 ~-~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~---g~~~~~~i~VGDs~~Di~~a~~~G~~-~v~v~~~~ 229 (274)
. .+|-.. ..|..++...|+ ...++++++.. |...++++|||||.||+-++...+-. .++...++
T Consensus 132 l~v~pyh~----h~C~~C~~NmCK----~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R~~~ 200 (234)
T PF06888_consen 132 LRVRPYHS----HGCSLCPPNMCK----GKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFPRKGY 200 (234)
T ss_pred EEEeCccC----CCCCcCCCccch----HHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEecCCCC
Confidence 0 000000 122233333333 45777777763 78889999999999999999886654 44444454
No 82
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=99.51 E-value=4.6e-14 Score=120.39 Aligned_cols=73 Identities=27% Similarity=0.388 Sum_probs=66.9
Q ss_pred ccCCCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCC--------CCCccccccCHhHHHHHH
Q 024023 178 RILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNIKEAI 248 (274)
Q Consensus 178 ~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~--------~~~a~~~~~~l~~l~~~l 248 (274)
...|||.+.+++.++++++.+++++++|||+. +||.+|+++|+.+++|.+|.. ...++|+++++.++...+
T Consensus 186 ~~~GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~~~~~~ 265 (269)
T COG0647 186 TVIGKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAELITAL 265 (269)
T ss_pred cccCCCCHHHHHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhhhhccCCcchHhhHHHHHhhh
Confidence 68899999999999999999999999999999 899999999999999988875 356899999999998876
Q ss_pred HH
Q 024023 249 PE 250 (274)
Q Consensus 249 ~~ 250 (274)
+.
T Consensus 266 ~~ 267 (269)
T COG0647 266 KE 267 (269)
T ss_pred hc
Confidence 54
No 83
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=99.48 E-value=1.9e-13 Score=116.87 Aligned_cols=68 Identities=21% Similarity=0.329 Sum_probs=59.7
Q ss_pred cccCCCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCC------C--CCccccccCHhHH
Q 024023 177 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP------V--PPADHALNSIHNI 244 (274)
Q Consensus 177 ~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~------~--~~a~~~~~~l~~l 244 (274)
....+||+|++++.++++++++++++++|||+. +|+.+|+++|+.++++.+|.. . ..++++++++.++
T Consensus 173 ~~~~gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~l~~~ 249 (249)
T TIGR01457 173 PVYIGKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAGLPIAPTHVVSSLAEW 249 (249)
T ss_pred ccccCCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhcCCCCCCEEeCChhhC
Confidence 355689999999999999999999999999997 899999999999999998863 1 4688888888764
No 84
>PRK10444 UMP phosphatase; Provisional
Probab=99.48 E-value=3.4e-14 Score=121.21 Aligned_cols=69 Identities=25% Similarity=0.278 Sum_probs=62.2
Q ss_pred cccCCCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCC--------CCCccccccCHhHHH
Q 024023 177 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNIK 245 (274)
Q Consensus 177 ~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~--------~~~a~~~~~~l~~l~ 245 (274)
....+||+|+.+..++++++++++++++|||+. +|+.+|+++|+.++++.+|.. ...++++++++.+|.
T Consensus 169 ~~~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el~ 246 (248)
T PRK10444 169 PFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADID 246 (248)
T ss_pred ccccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHhh
Confidence 345689999999999999999999999999997 899999999999999998874 257999999999873
No 85
>PRK11590 hypothetical protein; Provisional
Probab=99.48 E-value=6.6e-13 Score=110.80 Aligned_cols=104 Identities=13% Similarity=0.046 Sum_probs=82.7
Q ss_pred CCCChhHHHHHH-hC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 105 LKPDPVLRNLLL-SM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 105 ~~~~~~~~~~L~-~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
..++||+.+.|+ .+ |.+++|+|+++...+...++.+|+.. .+.+++++-.. .+++++.+..|+
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~~------------~~tg~~~g~~c~ 160 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQR------------RYGGWVLTLRCL 160 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEEE------------EEccEECCccCC
Confidence 567999999994 44 57999999999999999999998633 45667665111 267888888999
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEE
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVI 224 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~ 224 (274)
|..|...+++++ |.+.+.+.+.|||.+|+++...+|-+.+.
T Consensus 161 g~~K~~~l~~~~---~~~~~~~~aY~Ds~~D~pmL~~a~~~~~v 201 (211)
T PRK11590 161 GHEKVAQLERKI---GTPLRLYSGYSDSKQDNPLLYFCQHRWRV 201 (211)
T ss_pred ChHHHHHHHHHh---CCCcceEEEecCCcccHHHHHhCCCCEEE
Confidence 988877776666 56778889999999999999999977653
No 86
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.48 E-value=9.7e-14 Score=115.37 Aligned_cols=87 Identities=22% Similarity=0.308 Sum_probs=73.5
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCC
Q 024023 105 LKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 181 (274)
Q Consensus 105 ~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (274)
.++.|++.++|+.| |++++++|+.+...+....+.+|+. +.++.+... .
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~---~~~v~a~~~--~----------------------- 177 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIF---DSIVFARVI--G----------------------- 177 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSC---SEEEEESHE--T-----------------------
T ss_pred CcchhhhhhhhhhhhccCcceeeeeccccccccccccccccc---ccccccccc--c-----------------------
Confidence 35678999988887 5789999999999999999999994 333333211 2
Q ss_pred CCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcC
Q 024023 182 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAG 219 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G 219 (274)
||.+.++..+++.+++++.+|+||||+.||+.|+++||
T Consensus 178 kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 178 KPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp TTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred cccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99999999999999999999999999999999999987
No 87
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.43 E-value=1.8e-13 Score=115.48 Aligned_cols=60 Identities=13% Similarity=0.210 Sum_probs=50.5
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-CCCccccccC
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNS 240 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-~~~a~~~~~~ 240 (274)
+..|+.+++.+++.+|++++++++|||+.||++|++.+|+++++.+.... +..++++..+
T Consensus 155 ~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~ 215 (230)
T PRK01158 155 GVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEK 215 (230)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecC
Confidence 57889999999999999999999999999999999999998775544333 5567777655
No 88
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=99.43 E-value=5.2e-13 Score=92.74 Aligned_cols=65 Identities=31% Similarity=0.467 Sum_probs=60.1
Q ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEcCC-hhcHHHHHHcCCeEEEECCCCC--------CCCccccccCHhHH
Q 024023 180 LCKPSLEAIETAIRIANVDPKKTIFFDDS-ARNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNI 244 (274)
Q Consensus 180 ~~kp~~~~~~~~l~~~g~~~~~~i~VGDs-~~Di~~a~~~G~~~v~v~~~~~--------~~~a~~~~~~l~~l 244 (274)
.+||+|.++..++++++++++++++|||+ .+||.+|+++|+.++++.+|.. ...++++++++.|+
T Consensus 2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e~ 75 (75)
T PF13242_consen 2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKEA 75 (75)
T ss_dssp CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGGH
T ss_pred CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHhC
Confidence 36999999999999999999999999999 7999999999999999998774 35899999999885
No 89
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.42 E-value=1.1e-12 Score=113.34 Aligned_cols=70 Identities=19% Similarity=0.162 Sum_probs=54.1
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccccCHhH--HHHHHHHH
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEI 251 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~~l~~--l~~~l~~~ 251 (274)
+..|+.+++.+++.+|++++++++|||+.||++|++.+|+++++-+ +.. +..|++++.+-.+ +..+|+++
T Consensus 197 ~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgn-a~~~lk~~Ad~v~~~n~~dGv~~~l~~~ 270 (272)
T PRK10530 197 GNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGN-ADDAVKARADLVIGDNTTPSIAEFIYSH 270 (272)
T ss_pred CCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecC-chHHHHHhCCEEEecCCCCcHHHHHHHH
Confidence 3567889999999999999999999999999999999998766543 332 5568888765443 44455443
No 90
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=99.41 E-value=2.1e-12 Score=100.48 Aligned_cols=79 Identities=19% Similarity=0.334 Sum_probs=70.6
Q ss_pred hCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhC
Q 024023 117 SMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIAN 196 (274)
Q Consensus 117 ~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g 196 (274)
..|.+++|+||..+..+...++++|+. +++.+ .||.+..+..++++++
T Consensus 60 ~~gi~v~vvSNn~e~RV~~~~~~l~v~----fi~~A----------------------------~KP~~~~fr~Al~~m~ 107 (175)
T COG2179 60 EAGIKVVVVSNNKESRVARAAEKLGVP----FIYRA----------------------------KKPFGRAFRRALKEMN 107 (175)
T ss_pred hcCCEEEEEeCCCHHHHHhhhhhcCCc----eeecc----------------------------cCccHHHHHHHHHHcC
Confidence 346889999999999999999998874 55554 3999999999999999
Q ss_pred CCCCeEEEEcCCh-hcHHHHHHcCCeEEEECC
Q 024023 197 VDPKKTIFFDDSA-RNIASAKAAGLHTVIVGS 227 (274)
Q Consensus 197 ~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~ 227 (274)
+++++|++|||.. +|+.++..+|+.+|.|..
T Consensus 108 l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~P 139 (175)
T COG2179 108 LPPEEVVMVGDQLFTDVLGGNRAGMRTILVEP 139 (175)
T ss_pred CChhHEEEEcchhhhhhhcccccCcEEEEEEE
Confidence 9999999999999 999999999999999854
No 91
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.39 E-value=1.1e-11 Score=98.53 Aligned_cols=127 Identities=13% Similarity=0.128 Sum_probs=91.3
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCC--ccceeEecccCCCCCCCCCCCCcccccccCccc
Q 024023 103 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLED--CFEGIICFETINPRLQPADNTDGIENNSFSSNQ 177 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~--~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (274)
.+..+.||++++...| +.+++++|++....+..+...+|+.. .+...+-.+..+. +.+....++
T Consensus 85 ~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk-----------~~gfd~~~p 153 (227)
T KOG1615|consen 85 QKPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGK-----------YLGFDTNEP 153 (227)
T ss_pred CCCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCc-----------ccccccCCc
Confidence 4567889999998877 58899999999999999999999974 4444333333332 244566667
Q ss_pred ccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC------CCCccccccCHhHHH
Q 024023 178 RILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIK 245 (274)
Q Consensus 178 ~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~------~~~a~~~~~~l~~l~ 245 (274)
...+-.|++.+..+.+ +...+.++||||+.||+++... |.- ++..+.. ...+.|.+.+|+.|.
T Consensus 154 tsdsggKa~~i~~lrk--~~~~~~~~mvGDGatDlea~~p-a~a--fi~~~g~~~r~~vk~nak~~~~~f~~L~ 222 (227)
T KOG1615|consen 154 TSDSGGKAEVIALLRK--NYNYKTIVMVGDGATDLEAMPP-ADA--FIGFGGNVIREGVKANAKWYVTDFYVLG 222 (227)
T ss_pred cccCCccHHHHHHHHh--CCChheeEEecCCccccccCCc-hhh--hhccCCceEcHhhHhccHHHHHHHHHHc
Confidence 6777788889888777 8888999999999999988766 322 3333332 345666666665554
No 92
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=99.39 E-value=1.6e-11 Score=98.43 Aligned_cols=121 Identities=18% Similarity=0.298 Sum_probs=89.9
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCC---------------hHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCc
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNAD---------------QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDG 167 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~---------------~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~ 167 (274)
.+.|++.+.+..+ +++++++||.+ +......|+..|.. ||.++.+......
T Consensus 31 ~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv~--id~i~~Cph~p~~--------- 99 (181)
T COG0241 31 QFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGVK--IDGILYCPHHPED--------- 99 (181)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCCc--cceEEECCCCCCC---------
Confidence 4455666665555 69999999943 23344566666663 8888877644321
Q ss_pred ccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-----CCCccccccCHh
Q 024023 168 IENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHALNSIH 242 (274)
Q Consensus 168 ~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-----~~~a~~~~~~l~ 242 (274)
....+||++.++..+++++++++++.++|||+.+|+++|.++|+..+.+.++.. ....+++++++.
T Consensus 100 ---------~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (181)
T COG0241 100 ---------NCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTGIGVTTDGAGRAKWVFDSLA 170 (181)
T ss_pred ---------CCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEcCcccccccccccccccccHH
Confidence 133469999999999999999999999999999999999999999877755543 224567888887
Q ss_pred HHHH
Q 024023 243 NIKE 246 (274)
Q Consensus 243 ~l~~ 246 (274)
++..
T Consensus 171 ~~~~ 174 (181)
T COG0241 171 EFAN 174 (181)
T ss_pred HHHH
Confidence 7773
No 93
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.38 E-value=6.1e-13 Score=111.81 Aligned_cols=61 Identities=16% Similarity=0.130 Sum_probs=50.7
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-CCCccccccCH
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNSI 241 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-~~~a~~~~~~l 241 (274)
+.+|+.++..+++++|++++++++|||+.||++|++.+|+.+++-+.... +..++++..+-
T Consensus 147 ~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~ 208 (225)
T TIGR01482 147 GVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFGVAVANAQPELKEWADYVTESP 208 (225)
T ss_pred CCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCceEEcCChhHHHHHhcCeecCCC
Confidence 47889999999999999999999999999999999999998775544333 56677776543
No 94
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=99.34 E-value=1.5e-11 Score=109.05 Aligned_cols=72 Identities=17% Similarity=0.163 Sum_probs=60.6
Q ss_pred cccCCCCCHHHHHHHHHHh--------CC-----CCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCC-------CCCcc
Q 024023 177 QRILCKPSLEAIETAIRIA--------NV-----DPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP-------VPPAD 235 (274)
Q Consensus 177 ~~~~~kp~~~~~~~~l~~~--------g~-----~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~-------~~~a~ 235 (274)
....|||++..++.+++.+ +. ++++++||||++ +||.+|+++|+.+++|.+|.. ...++
T Consensus 228 ~~~~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~~~~~p~ 307 (321)
T TIGR01456 228 YYTLGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDLKECKPT 307 (321)
T ss_pred eEEcCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCCCCCCCC
Confidence 3577999999999988887 43 457999999999 999999999999999988732 23588
Q ss_pred ccccCHhHHHHHH
Q 024023 236 HALNSIHNIKEAI 248 (274)
Q Consensus 236 ~~~~~l~~l~~~l 248 (274)
++++++.++...|
T Consensus 308 ~vv~~l~e~~~~i 320 (321)
T TIGR01456 308 LIVNDVFDAVTKI 320 (321)
T ss_pred EEECCHHHHHHHh
Confidence 9999999988754
No 95
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=99.30 E-value=4.4e-11 Score=99.63 Aligned_cols=103 Identities=14% Similarity=0.058 Sum_probs=79.1
Q ss_pred CCCChhHHHHHH-hC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecc-cCCCCCCCCCCCCcccccccCccccc
Q 024023 105 LKPDPVLRNLLL-SM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFE-TINPRLQPADNTDGIENNSFSSNQRI 179 (274)
Q Consensus 105 ~~~~~~~~~~L~-~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (274)
..++|++.+.|+ .+ |.+++|+|++....++.+.+..++.+- +.+++++ ++. +++...+.+|
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~-~~~i~t~le~~-------------~gg~~~g~~c 158 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR-LNLIASQIERG-------------NGGWVLPLRC 158 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc-CcEEEEEeEEe-------------CCceEcCccC
Confidence 467899999995 43 689999999999999999988666442 4566654 211 3366777888
Q ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEE
Q 024023 180 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVI 224 (274)
Q Consensus 180 ~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~ 224 (274)
.|..|...+++.+ |.+.+.+.+.|||.+|++|...+|.+.+.
T Consensus 159 ~g~~Kv~rl~~~~---~~~~~~~~aYsDS~~D~pmL~~a~~~~~V 200 (210)
T TIGR01545 159 LGHEKVAQLEQKI---GSPLKLYSGYSDSKQDNPLLAFCEHRWRV 200 (210)
T ss_pred CChHHHHHHHHHh---CCChhheEEecCCcccHHHHHhCCCcEEE
Confidence 8887777777666 44667789999999999999999977653
No 96
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.30 E-value=2.5e-11 Score=98.33 Aligned_cols=149 Identities=13% Similarity=0.192 Sum_probs=103.2
Q ss_pred CChHHHHHHHhccCCCCCCCCChhHHHHHHhCC----CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCC
Q 024023 87 FDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP----QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPA 162 (274)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~----~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~ 162 (274)
...+++.+.+ +.++..||+.++++.+. +.++|+|.....++..+|+.+|+.++|+.|++....
T Consensus 71 v~~~~ik~~~------r~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~------- 137 (256)
T KOG3120|consen 71 VRIAEIKQVL------RSIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPAC------- 137 (256)
T ss_pred CCHHHHHHHH------hcCCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcc-------
Confidence 3466666555 56889999999988773 578999999999999999999999999999886521
Q ss_pred CCCCccc-----------ccccCcccccCCCCCHHHHHHHHHH---hCCCCCeEEEEcCChhcHHHHHH-cCCeEEEECC
Q 024023 163 DNTDGIE-----------NNSFSSNQRILCKPSLEAIETAIRI---ANVDPKKTIFFDDSARNIASAKA-AGLHTVIVGS 227 (274)
Q Consensus 163 ~~~~~~~-----------~~~~~~~~~~~~kp~~~~~~~~l~~---~g~~~~~~i~VGDs~~Di~~a~~-~G~~~v~v~~ 227 (274)
+|+-. .|..++...|+++ .+.++..+ -|+..++.+||||+.||+-.... .+..+++...
T Consensus 138 --~da~G~L~v~pyH~~hsC~~CPsNmCKg~----Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRk 211 (256)
T KOG3120|consen 138 --VDASGRLLVRPYHTQHSCNLCPSNMCKGL----VLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRK 211 (256)
T ss_pred --cCCCCcEEeecCCCCCccCcCchhhhhhH----HHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccC
Confidence 11111 3445566566655 44444433 38888999999999999765544 4556666666
Q ss_pred CCC-----------CCCccccccCHhHHHHHHHHHHhh
Q 024023 228 SVP-----------VPPADHALNSIHNIKEAIPEIWEG 254 (274)
Q Consensus 228 ~~~-----------~~~a~~~~~~l~~l~~~l~~~~~~ 254 (274)
+++ -...-...+|=+++...|..+...
T Consensus 212 gfpl~k~~~~~p~~~kasV~~W~sg~d~~~~L~~lik~ 249 (256)
T KOG3120|consen 212 GFPLWKLISANPMLLKASVLEWSSGEDLERILQQLIKT 249 (256)
T ss_pred CCchHhhhhcCcceeeeeEEecccHHHHHHHHHHHHHH
Confidence 664 112334466777777776666443
No 97
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=99.29 E-value=1.1e-10 Score=100.14 Aligned_cols=122 Identities=15% Similarity=0.078 Sum_probs=84.1
Q ss_pred cCCCChHHHHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCC
Q 024023 84 GYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQ 160 (274)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~ 160 (274)
+..++.+.+...+.+ ..+.+.||+.++++.| +++++|+|++....+...++.+|+.+.+..+++..-.-.
T Consensus 103 ~~~~~~e~i~~~v~~----~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~--- 175 (277)
T TIGR01544 103 QQAFPKAKIKEIVAE----SDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFD--- 175 (277)
T ss_pred cCCCCHHHHHHHHhh----cCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEEC---
Confidence 445566666666643 4578999999998888 589999999999999999999998766666644321000
Q ss_pred CCCCCCcccccccCcccccCCCCCHH-HHHHHHHHhC--CCCCeEEEEcCChhcHHHHHHc
Q 024023 161 PADNTDGIENNSFSSNQRILCKPSLE-AIETAIRIAN--VDPKKTIFFDDSARNIASAKAA 218 (274)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~kp~~~-~~~~~l~~~g--~~~~~~i~VGDs~~Di~~a~~~ 218 (274)
-++ ..++ .+++.+..-.|.+ .+....+.++ ..+++|++||||.+|+.||...
T Consensus 176 ----~dG-vltG-~~~P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 176 ----EDG-VLKG-FKGPLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred ----CCC-eEeC-CCCCcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCC
Confidence 000 0122 2233333333444 4556888888 7999999999999999997654
No 98
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.28 E-value=1.7e-11 Score=108.67 Aligned_cols=87 Identities=16% Similarity=0.171 Sum_probs=76.9
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHH----cCCCCccceeEecccCCCCCCCCCCCCcccccccCccccc
Q 024023 107 PDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGR----LGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 179 (274)
Q Consensus 107 ~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~----~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (274)
+++++.++|+.| |+.++|+|+.+...+...++. +++.++|+.+.+..
T Consensus 32 ~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~~-------------------------- 85 (320)
T TIGR01686 32 LHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSINW-------------------------- 85 (320)
T ss_pred cHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEec--------------------------
Confidence 467788887777 588999999999999999998 88988998876652
Q ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCe
Q 024023 180 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLH 221 (274)
Q Consensus 180 ~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~ 221 (274)
||+++.+..+++++|+.+++++||||++.|+.++++++-.
T Consensus 86 --~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 86 --GPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPV 125 (320)
T ss_pred --CchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCC
Confidence 9999999999999999999999999999999999987653
No 99
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.28 E-value=4e-12 Score=100.13 Aligned_cols=93 Identities=16% Similarity=0.072 Sum_probs=82.6
Q ss_pred CCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCC-ccceeEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 104 KLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLED-CFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~-~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
.+.++||+.++|+.|+ ++++|+|++....+..+++.+++.. +|+.++++++....
T Consensus 43 ~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~~---------------------- 100 (148)
T smart00577 43 YVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVFV---------------------- 100 (148)
T ss_pred EEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECcccccc----------------------
Confidence 3567899999999994 7899999999999999999999865 56999999988764
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeE
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT 222 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~ 222 (274)
||+ +..+++++|.+|++|++|||+.+|+.+++++|+..
T Consensus 101 -KP~---~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i 138 (148)
T smart00577 101 -KGK---YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPI 138 (148)
T ss_pred -CCe---EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEe
Confidence 776 88899999999999999999999999999998764
No 100
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.27 E-value=3.9e-12 Score=106.35 Aligned_cols=60 Identities=13% Similarity=0.175 Sum_probs=49.7
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-CCCccccccC
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNS 240 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-~~~a~~~~~~ 240 (274)
+..|..+++.+++.+|++++++++|||+.||++|++.+|+.+++.+.... +..++++..+
T Consensus 145 ~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~vam~na~~~~k~~A~~v~~~ 205 (215)
T TIGR01487 145 GVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVAVANADDQLKEIADYVTSN 205 (215)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEEcCCccHHHHHhCCEEcCC
Confidence 46778899999999999999999999999999999999988776654333 4556776654
No 101
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.27 E-value=7.7e-11 Score=102.16 Aligned_cols=72 Identities=21% Similarity=0.243 Sum_probs=55.6
Q ss_pred CCHHHHHHHHHHhCCCC-CeEEEEcCChhcHHHHHHcCCeEEEECCCCCCC----C-c-cccc--cC--HhHHHHHHHHH
Q 024023 183 PSLEAIETAIRIANVDP-KKTIFFDDSARNIASAKAAGLHTVIVGSSVPVP----P-A-DHAL--NS--IHNIKEAIPEI 251 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~-~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~----~-a-~~~~--~~--l~~l~~~l~~~ 251 (274)
.|..+++.+++.+|+++ +++++|||+.||++|++.+|+.+++.+...... . + +++. .+ -+.+.+.|+++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~~ 269 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAINKL 269 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHHHH
Confidence 66779999999999999 999999999999999999999988776554422 2 2 3544 23 44667777776
Q ss_pred Hhh
Q 024023 252 WEG 254 (274)
Q Consensus 252 ~~~ 254 (274)
++.
T Consensus 270 ~~~ 272 (273)
T PRK00192 270 LSK 272 (273)
T ss_pred Hhh
Confidence 654
No 102
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=99.24 E-value=1.9e-10 Score=97.76 Aligned_cols=79 Identities=24% Similarity=0.282 Sum_probs=68.4
Q ss_pred ccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCC------------CCCccc
Q 024023 170 NNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP------------VPPADH 236 (274)
Q Consensus 170 ~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~------------~~~a~~ 236 (274)
.++..+++...|||++.++..++++++++|++++||||+. +||.-++++|++++++-+|-. ...|||
T Consensus 212 ~~~t~R~P~v~GKP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~~~~~~~~PDy 291 (306)
T KOG2882|consen 212 KFATGRQPIVLGKPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEAQGDNKMVPDY 291 (306)
T ss_pred HHHhcCCCeecCCCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHhcccccCCCCch
Confidence 5556677899999999999999999999999999999999 799999999999999877664 234888
Q ss_pred cccCHhHHHHHH
Q 024023 237 ALNSIHNIKEAI 248 (274)
Q Consensus 237 ~~~~l~~l~~~l 248 (274)
.++++.++.+.+
T Consensus 292 y~~~l~d~~~~~ 303 (306)
T KOG2882|consen 292 YADSLGDLLPLL 303 (306)
T ss_pred HHhhHHHHhhhc
Confidence 888888887643
No 103
>PRK08238 hypothetical protein; Validated
Probab=99.24 E-value=2.9e-10 Score=105.41 Aligned_cols=96 Identities=20% Similarity=0.265 Sum_probs=74.6
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 104 KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
.++..|++.+.++.+ |.+++++|++++..++..++.+|+ ||.++++++.... +
T Consensus 70 ~lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl---Fd~Vigsd~~~~~---------------------k 125 (479)
T PRK08238 70 TLPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL---FDGVFASDGTTNL---------------------K 125 (479)
T ss_pred hCCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC---CCEEEeCCCcccc---------------------C
Confidence 456779999999888 488999999999999999999988 8999999876543 1
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
++||++. +.+.++. ++++++||+.+|+++++.+| +.+.++.+.
T Consensus 126 g~~K~~~---l~~~l~~--~~~~yvGDS~~Dlp~~~~A~-~av~Vn~~~ 168 (479)
T PRK08238 126 GAAKAAA---LVEAFGE--RGFDYAGNSAADLPVWAAAR-RAIVVGASP 168 (479)
T ss_pred CchHHHH---HHHHhCc--cCeeEecCCHHHHHHHHhCC-CeEEECCCH
Confidence 2344443 3355552 55899999999999999999 556676554
No 104
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=99.21 E-value=8.5e-11 Score=109.45 Aligned_cols=89 Identities=25% Similarity=0.273 Sum_probs=72.8
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCCh------------HHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCccccc
Q 024023 107 PDPVLRNLLLSM---PQRKIIFTNADQ------------KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENN 171 (274)
Q Consensus 107 ~~~~~~~~L~~l---~~~~~i~s~~~~------------~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~ 171 (274)
++||+.+.|+.| |++++|+||.+. ..+..+++.+|+. |+.+++.++...
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdviia~~~~~~-------------- 261 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQVFIAIGAGFY-------------- 261 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEEEEeCCCCCC--------------
Confidence 467888888777 689999999766 4577788888886 887777765544
Q ss_pred ccCcccccCCCCCHHHHHHHHHHhC----CCCCeEEEEcCChhcHHHHHHcCC
Q 024023 172 SFSSNQRILCKPSLEAIETAIRIAN----VDPKKTIFFDDSARNIASAKAAGL 220 (274)
Q Consensus 172 ~~~~~~~~~~kp~~~~~~~~l~~~g----~~~~~~i~VGDs~~Di~~a~~~G~ 220 (274)
+||++.++..++++++ +++++++||||+..|+.+++++|-
T Consensus 262 ---------RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaagr~~~g~~ag~ 305 (526)
T TIGR01663 262 ---------RKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAAGRPANGKAAGK 305 (526)
T ss_pred ---------CCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcccchHHHHhcCC
Confidence 4999999999999995 899999999999988877666664
No 105
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=99.20 E-value=9.3e-10 Score=86.72 Aligned_cols=196 Identities=17% Similarity=0.199 Sum_probs=123.8
Q ss_pred CccEEEEecCCCccCCc---hhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHH--H----HHHh---cCCC
Q 024023 20 NYECLLFDLDDTLYPLS---TGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA--G----LKAV---GYEF 87 (274)
Q Consensus 20 ~~k~viFDlDGTL~d~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~----~~~~---~~~~ 87 (274)
+.|+++.|+.||+..-. ........+.+.+++.+..+-+. +.....+.....|.... . +..+ +...
T Consensus 3 m~kaiLlDIEGTv~~iSFVkdvlFPYa~~~lp~fv~e~~e~~~--v~~~v~~v~~e~g~~~s~E~lva~~~~wiaed~K~ 80 (229)
T COG4229 3 MVKAILLDIEGTVSPISFVKDVLFPYAARKLPDFVRENTEDSE--VKKIVDEVLSEFGIANSEEALVALLLEWIAEDSKD 80 (229)
T ss_pred chhhheeeccccccchhHHHhhhhHHHHHHhHHHHHhhccCCh--hhHHHHHHHHHhCccchHHHHHHHHHHHHhccccc
Confidence 56899999999999622 12233344455665655555432 23333455555554431 1 1011 0100
Q ss_pred -ChHHH-HHHHhccCCCC--CCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHc---CCCCccceeEecccCCC
Q 024023 88 -DNDEF-HAFVHGKLPYE--KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRL---GLEDCFEGIICFETINP 157 (274)
Q Consensus 88 -~~~~~-~~~~~~~~~~~--~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~---gl~~~fd~i~~~~~~~~ 157 (274)
+...+ ..+|...+... +..+||++.+.+++. |.+++|.|+++......+.... ++..+|+..+-. .++
T Consensus 81 t~lK~lQG~iWa~Gy~sgelkahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDt-tiG- 158 (229)
T COG4229 81 TPLKALQGMIWAHGYESGELKAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDT-TIG- 158 (229)
T ss_pred chHHHHHhHHHHhccccCccccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeec-ccc-
Confidence 11111 11233322222 457899999999877 5899999999988777666542 355666666554 233
Q ss_pred CCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCCc---
Q 024023 158 RLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPA--- 234 (274)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~a--- 234 (274)
.|....-+..++...|++|.+++|+.|++..+.+|+.+|+.+..+......+-+
T Consensus 159 -----------------------~KrE~~SY~kIa~~iGl~p~eilFLSDn~~EL~AA~~vGl~t~l~~R~g~~P~~d~~ 215 (229)
T COG4229 159 -----------------------KKRESQSYAKIAGDIGLPPAEILFLSDNPEELKAAAGVGLATGLAVRPGNAPVPDGQ 215 (229)
T ss_pred -----------------------ccccchhHHHHHHhcCCCchheEEecCCHHHHHHHHhcchheeeeecCCCCCCCCCc
Confidence 277778899999999999999999999999999999999999987655443222
Q ss_pred -cccccCHh
Q 024023 235 -DHALNSIH 242 (274)
Q Consensus 235 -~~~~~~l~ 242 (274)
-.+++||+
T Consensus 216 ~~~~~~sf~ 224 (229)
T COG4229 216 GFLVYKSFE 224 (229)
T ss_pred Cceeeechh
Confidence 34455555
No 106
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.18 E-value=1.1e-10 Score=101.01 Aligned_cols=71 Identities=14% Similarity=0.131 Sum_probs=56.5
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-CCCccccccCHhH--HHHHHHHH
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNSIHN--IKEAIPEI 251 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-~~~a~~~~~~l~~--l~~~l~~~ 251 (274)
+..|..+++.+++.+|++++++++|||+.||++|.+.+|.++++-+.... +..|+++..+-++ +..+|+++
T Consensus 194 gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~~ 267 (270)
T PRK10513 194 RVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEKY 267 (270)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHHHH
Confidence 57889999999999999999999999999999999999998776554433 6678888765432 44445443
No 107
>PRK10976 putative hydrolase; Provisional
Probab=99.18 E-value=6.9e-11 Score=101.95 Aligned_cols=71 Identities=13% Similarity=0.115 Sum_probs=54.4
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-CCCcc--ccccCHhH--HHHHHHHH
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPAD--HALNSIHN--IKEAIPEI 251 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-~~~a~--~~~~~l~~--l~~~l~~~ 251 (274)
+..|..+++.+++.+|++++++++|||+.||++|.+.+|.++++-+.... +..|+ +++.+-++ +..+|+++
T Consensus 188 gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~~~ 263 (266)
T PRK10976 188 GVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLRKL 263 (266)
T ss_pred CCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHHHH
Confidence 57789999999999999999999999999999999999998776655443 44554 55544332 44555544
No 108
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=99.17 E-value=5.9e-11 Score=91.33 Aligned_cols=82 Identities=21% Similarity=0.305 Sum_probs=71.7
Q ss_pred HHHHHhCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHH
Q 024023 112 RNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETA 191 (274)
Q Consensus 112 ~~~L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~ 191 (274)
.++|..++.++.|+|+.....++...+.+|+..++ .+- +.|...+..+
T Consensus 44 ik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~~----qG~----------------------------~dK~~a~~~L 91 (170)
T COG1778 44 IKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHLY----QGI----------------------------SDKLAAFEEL 91 (170)
T ss_pred HHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCceee----ech----------------------------HhHHHHHHHH
Confidence 36778889999999999999999999999996444 332 5668899999
Q ss_pred HHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEE
Q 024023 192 IRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 225 (274)
Q Consensus 192 l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v 225 (274)
++++++.++++.||||..+|+.....+|++++..
T Consensus 92 ~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~ 125 (170)
T COG1778 92 LKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA 125 (170)
T ss_pred HHHhCCCHHHhhhhcCccccHHHHHHcCCccccc
Confidence 9999999999999999999999999999987643
No 109
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.16 E-value=2.8e-10 Score=98.51 Aligned_cols=72 Identities=7% Similarity=0.039 Sum_probs=55.5
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-CCCccc--cccCHh--HHHHHHHHHH
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADH--ALNSIH--NIKEAIPEIW 252 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-~~~a~~--~~~~l~--~l~~~l~~~~ 252 (274)
+-.|..+++.+++.+|++++++++|||+.||++|.+.+|.++++-+.... +..|++ ++.+-+ .+..+|++++
T Consensus 186 g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~~~~ 262 (272)
T PRK15126 186 GCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWL 262 (272)
T ss_pred CCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHHHHHh
Confidence 56789999999999999999999999999999999999988776554333 455554 444332 3666666665
No 110
>PLN02887 hydrolase family protein
Probab=99.15 E-value=2.7e-10 Score=107.49 Aligned_cols=61 Identities=15% Similarity=0.122 Sum_probs=51.9
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-CCCccccccCH
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNSI 241 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-~~~a~~~~~~l 241 (274)
+..|..+++.+++.+|++++++++|||+.||++|.+.+|.++++-+.... +..|+++..+-
T Consensus 505 gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sN 566 (580)
T PLN02887 505 GTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSN 566 (580)
T ss_pred CCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCC
Confidence 57889999999999999999999999999999999999998776654443 66688877553
No 111
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=99.14 E-value=1.9e-09 Score=95.37 Aligned_cols=118 Identities=18% Similarity=0.170 Sum_probs=83.5
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHc-C-------CCCccceeEecccCCCCCCCCCCCCccc---
Q 024023 104 KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRL-G-------LEDCFEGIICFETINPRLQPADNTDGIE--- 169 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~-g-------l~~~fd~i~~~~~~~~~~~~~~~~~~~~--- 169 (274)
.+.+.|++.++|+.+ |.+++|+||++...+...++.+ | +.++||.|++...-. .=|.+...
T Consensus 182 yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP-----~FF~~~~pf~~ 256 (343)
T TIGR02244 182 YVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKP-----GFFTEGRPFRQ 256 (343)
T ss_pred HhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCC-----cccCCCCceEE
Confidence 456789999999888 5889999999999999999996 7 889999998876321 11111111
Q ss_pred ---ccccCcccc----cCC-CCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHH-HcCCeEEEEC
Q 024023 170 ---NNSFSSNQR----ILC-KPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAK-AAGLHTVIVG 226 (274)
Q Consensus 170 ---~~~~~~~~~----~~~-kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~-~~G~~~v~v~ 226 (274)
.++..+-.. ..| .=...-...+.+.+|+.++++++|||++ +|+..++ .+||.++++-
T Consensus 257 v~~~~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~ 323 (343)
T TIGR02244 257 VDVETGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAII 323 (343)
T ss_pred EeCCCCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEc
Confidence 111111110 001 0012346677788899999999999999 8999998 8999999884
No 112
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.14 E-value=2.3e-10 Score=98.60 Aligned_cols=72 Identities=19% Similarity=0.229 Sum_probs=54.4
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-CCCccccccC--HhHHHHHHHHHH
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNS--IHNIKEAIPEIW 252 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-~~~a~~~~~~--l~~l~~~l~~~~ 252 (274)
+..|..+++.+++.+|++++++++|||+.||++|.+.+|.++++-+.... +..++++..+ -+.+..+|+++.
T Consensus 187 g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~Gv~~~l~~~~ 261 (264)
T COG0561 187 GVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDEDGVAEALEKLL 261 (264)
T ss_pred CCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccchHHHHHHHHHh
Confidence 57889999999999999999999999999999999999988876665333 4555544333 233445555443
No 113
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=99.12 E-value=7.9e-11 Score=94.67 Aligned_cols=86 Identities=20% Similarity=0.328 Sum_probs=67.6
Q ss_pred CCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChh-cHHHHHHcCCeEEEECCCCC--------CCC
Q 024023 163 DNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSAR-NIASAKAAGLHTVIVGSSVP--------VPP 233 (274)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~-Di~~a~~~G~~~v~v~~~~~--------~~~ 233 (274)
-++.++++-+-+ +..+.|||++..|+.+++.+|++|++++||||..+ |+-.|+++||..+.|.+|.- ...
T Consensus 163 ~fv~aLeyatg~-~a~vvGKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k~~~~ 241 (262)
T KOG3040|consen 163 PFVAALEYATGC-EATVVGKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEKPPVP 241 (262)
T ss_pred HHHHHhhhccCc-eEEEecCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccccCCcccccCCCC
Confidence 445555532222 23566899999999999999999999999999996 79999999999999977663 345
Q ss_pred ccccccCHhHHHHHHH
Q 024023 234 ADHALNSIHNIKEAIP 249 (274)
Q Consensus 234 a~~~~~~l~~l~~~l~ 249 (274)
|+..+++|.+..+.|-
T Consensus 242 p~~~~d~f~~AVd~I~ 257 (262)
T KOG3040|consen 242 PDLTADNFADAVDLII 257 (262)
T ss_pred cchhhhhHHHHHHHHH
Confidence 7778888888777653
No 114
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.10 E-value=4.2e-10 Score=94.42 Aligned_cols=43 Identities=16% Similarity=0.068 Sum_probs=39.3
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEE
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTV 223 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v 223 (274)
+-.|+.+++.+++.+|++++++++|||+.||++|.+.+|.+++
T Consensus 177 ~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va 219 (221)
T TIGR02463 177 SSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVV 219 (221)
T ss_pred CCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEE
Confidence 3567789999999999999999999999999999999998765
No 115
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=99.09 E-value=2.4e-09 Score=90.88 Aligned_cols=50 Identities=26% Similarity=0.476 Sum_probs=46.5
Q ss_pred cCCCCCHHHHHHHHHHhCCCCCeE-EEEcCCh-hcHHHHHHcCCeEEEECCC
Q 024023 179 ILCKPSLEAIETAIRIANVDPKKT-IFFDDSA-RNIASAKAAGLHTVIVGSS 228 (274)
Q Consensus 179 ~~~kp~~~~~~~~l~~~g~~~~~~-i~VGDs~-~Di~~a~~~G~~~v~v~~~ 228 (274)
..+||++..++.++++++++++++ ++|||+. +||.+|+++|+.++++.+|
T Consensus 185 ~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G 236 (236)
T TIGR01460 185 VVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG 236 (236)
T ss_pred eecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence 468999999999999999998887 9999999 8999999999999999765
No 116
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.07 E-value=1.4e-09 Score=94.21 Aligned_cols=74 Identities=11% Similarity=0.049 Sum_probs=57.3
Q ss_pred CCCCCHHHHHHHHHHhCC---CCCeEEEEcCChhcHHHHHHcCCeEEEECCCC-------CCCCccccccCHh--HHHHH
Q 024023 180 LCKPSLEAIETAIRIANV---DPKKTIFFDDSARNIASAKAAGLHTVIVGSSV-------PVPPADHALNSIH--NIKEA 247 (274)
Q Consensus 180 ~~kp~~~~~~~~l~~~g~---~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~-------~~~~a~~~~~~l~--~l~~~ 247 (274)
.+-.|..+++.+++.+|+ +++++++|||+.||++|.+.+|.++++-+... ....++|+....+ .+.+.
T Consensus 184 ~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~ 263 (271)
T PRK03669 184 ASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREG 263 (271)
T ss_pred CCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHH
Confidence 367889999999999999 99999999999999999999999888763331 1235667666655 56666
Q ss_pred HHHHHh
Q 024023 248 IPEIWE 253 (274)
Q Consensus 248 l~~~~~ 253 (274)
|+.+..
T Consensus 264 l~~~~~ 269 (271)
T PRK03669 264 LDHFFS 269 (271)
T ss_pred HHHHHh
Confidence 665543
No 117
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=99.05 E-value=1.9e-09 Score=88.02 Aligned_cols=95 Identities=18% Similarity=0.268 Sum_probs=61.3
Q ss_pred hhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCH
Q 024023 109 PVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSL 185 (274)
Q Consensus 109 ~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~ 185 (274)
|++.++++.+ +.+++|+|++....+..+++.+|+.. +.+++.+-.... .....+.+....+ + .|.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~--~~v~~~~~~~~~--------~~~~~~~~~~~~~-~-~K~ 159 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDD--DNVIGNELFDNG--------GGIFTGRITGSNC-G-GKA 159 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSE--GGEEEEEEECTT--------CCEEEEEEEEEEE-S-HHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc--eEEEEEeeeecc--------cceeeeeECCCCC-C-cHH
Confidence 5666888665 79999999999999999999998874 234443321000 0000011111000 1 256
Q ss_pred HHHHHH---HHHhCCCCCeEEEEcCChhcHHHHH
Q 024023 186 EAIETA---IRIANVDPKKTIFFDDSARNIASAK 216 (274)
Q Consensus 186 ~~~~~~---l~~~g~~~~~~i~VGDs~~Di~~a~ 216 (274)
..++.+ ... +..+..+++||||.+|+.+++
T Consensus 160 ~~l~~~~~~~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 160 EALKELYIRDEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHH-THTCCEEEEEESSGGGHHHHH
T ss_pred HHHHHHHHHhhc-CCCCCeEEEEECCHHHHHHhC
Confidence 666666 344 788999999999999999985
No 118
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=99.05 E-value=2.9e-09 Score=91.22 Aligned_cols=93 Identities=13% Similarity=0.201 Sum_probs=67.6
Q ss_pred hHHHHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChH---HHHHHHHHcCCCCc-cceeEecccCCCCCCC
Q 024023 89 NDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQK---HAMEVLGRLGLEDC-FEGIICFETINPRLQP 161 (274)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~---~~~~~l~~~gl~~~-fd~i~~~~~~~~~~~~ 161 (274)
.+.+.++... ....++||+.++|+.+ |.+++++|+.+.. .+...|+.+|+... ++.++..++
T Consensus 105 ~~~w~~wv~~----~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~------- 173 (266)
T TIGR01533 105 PETWDKWVQA----AQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKD------- 173 (266)
T ss_pred HHHHHHHHHc----CCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCC-------
Confidence 4445555433 3457899999999877 6889999998744 45577888999764 456666542
Q ss_pred CCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHH
Q 024023 162 ADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASA 215 (274)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a 215 (274)
.++|+..+..+.+++++ +++|||+.+|+..+
T Consensus 174 -------------------~~~K~~rr~~I~~~y~I----vl~vGD~~~Df~~~ 204 (266)
T TIGR01533 174 -------------------KSSKESRRQKVQKDYEI----VLLFGDNLLDFDDF 204 (266)
T ss_pred -------------------CCCcHHHHHHHHhcCCE----EEEECCCHHHhhhh
Confidence 15667888888887776 89999999998653
No 119
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=99.04 E-value=1.3e-09 Score=87.05 Aligned_cols=99 Identities=21% Similarity=0.371 Sum_probs=68.4
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeC-CChHHHHHHHHHcCCC----------CccceeEecccCCCCCCCCCCCCcc
Q 024023 103 EKLKPDPVLRNLLLSM---PQRKIIFTN-ADQKHAMEVLGRLGLE----------DCFEGIICFETINPRLQPADNTDGI 168 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l---~~~~~i~s~-~~~~~~~~~l~~~gl~----------~~fd~i~~~~~~~~~~~~~~~~~~~ 168 (274)
..+.++|++...|+.| |.+++++|. ..++.++..|+.+++. ++|+.. ++..
T Consensus 42 ~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~----eI~~----------- 106 (169)
T PF12689_consen 42 EEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYL----EIYP----------- 106 (169)
T ss_dssp -EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECEE----EESS-----------
T ss_pred CEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcchh----heec-----------
Confidence 5678999999998888 588999995 4567999999999998 555552 2221
Q ss_pred cccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 169 ENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 169 ~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
-.|..-++.+.++.|+++++++||+|-..+++..+..|+.++.+..|-
T Consensus 107 -------------gsK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~Gl 154 (169)
T PF12689_consen 107 -------------GSKTTHFRRIHRKTGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDGL 154 (169)
T ss_dssp -------------S-HHHHHHHHHHHH---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS-
T ss_pred -------------CchHHHHHHHHHhcCCChhHEEEecCchhcceeeEecCcEEEEeCCCC
Confidence 356778999999999999999999999999999989999999998864
No 120
>PTZ00445 p36-lilke protein; Provisional
Probab=98.95 E-value=4.8e-09 Score=85.53 Aligned_cols=103 Identities=16% Similarity=0.104 Sum_probs=70.5
Q ss_pred HHhCCCcEEEEeCCChH---------------HHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCccccc
Q 024023 115 LLSMPQRKIIFTNADQK---------------HAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 179 (274)
Q Consensus 115 L~~l~~~~~i~s~~~~~---------------~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (274)
|...+++++|+|-++.. .+...|+.-+...-+..+++.-.--+ ..-..=.+..
T Consensus 87 l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w------------~~p~~y~~~g 154 (219)
T PTZ00445 87 LKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFW------------QEPSDYRPLG 154 (219)
T ss_pred HHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCccc------------CChhhhhhhc
Confidence 33446888888877664 45666665555544455554321110 0000001122
Q ss_pred CCCCCHHH--H--HHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 180 LCKPSLEA--I--ETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 180 ~~kp~~~~--~--~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
..||.|+. + +.+++++|+.|++++||+|+..++++|++.|+.++.+..+.
T Consensus 155 l~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~~e 208 (219)
T PTZ00445 155 LDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTGNE 208 (219)
T ss_pred ccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCChH
Confidence 34999999 8 99999999999999999999999999999999999886543
No 121
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.92 E-value=1e-09 Score=93.53 Aligned_cols=96 Identities=20% Similarity=0.177 Sum_probs=68.7
Q ss_pred ChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCcccee--EecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 108 DPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGI--ICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 108 ~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
++++.++++.+ +.++ |+||.+.......+..+|...+|..+ .+.+... .+|
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~~~~~i~~~g~~~~~-----------------------~gK 195 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGYYAELIKQLGGKVIY-----------------------SGK 195 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccHHHHHHHHhCCcEec-----------------------CCC
Confidence 46666666654 2444 66777666655455555555555433 3333222 369
Q ss_pred CCHHHHHHHHHHhCCC-CCeEEEEcCC-hhcHHHHHHcCCeEEEECC
Q 024023 183 PSLEAIETAIRIANVD-PKKTIFFDDS-ARNIASAKAAGLHTVIVGS 227 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~-~~~~i~VGDs-~~Di~~a~~~G~~~v~v~~ 227 (274)
|+|+.+..+++++|.. ++++++|||+ .+|+.+|+++|+.++++.+
T Consensus 196 P~~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~t 242 (242)
T TIGR01459 196 PYPAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDTALVLT 242 (242)
T ss_pred CCHHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeEEEEeC
Confidence 9999999999999975 5789999999 5999999999999998753
No 122
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=98.88 E-value=3.6e-08 Score=78.00 Aligned_cols=149 Identities=13% Similarity=0.090 Sum_probs=84.8
Q ss_pred CChHHHHHHHhccCCCCCCCCChhHHHHHHhCC---CcEEEEeCCChHHHHHHHHHcCCCCccce-eEecccCCCCCCCC
Q 024023 87 FDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEG-IICFETINPRLQPA 162 (274)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~---~~~~i~s~~~~~~~~~~l~~~gl~~~fd~-i~~~~~~~~~~~~~ 162 (274)
.+.++..+.+. ..+.+.|+.+++.++++ .+++|+|++....++.+++.++-.+-.+. -+.+++...
T Consensus 59 ~s~~Eile~ll-----k~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~i----- 128 (220)
T COG4359 59 SSLEEILEFLL-----KDIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYI----- 128 (220)
T ss_pred CCHHHHHHHHH-----hhcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceE-----
Confidence 34456666552 45678899999988874 89999999999999999998763222222 122222111
Q ss_pred CCCCcccccc-cCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEE---EECCCCCCCCccccc
Q 024023 163 DNTDGIENNS-FSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTV---IVGSSVPVPPADHAL 238 (274)
Q Consensus 163 ~~~~~~~~~~-~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v---~v~~~~~~~~a~~~~ 238 (274)
+.++.++.- ....+..+.| +.. ++.+.-.++.++|.|||.+|+.+|+....-++ +++.-.++...-.-+
T Consensus 129 -h~dg~h~i~~~~ds~fG~dK--~~v----I~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK~~L~nyc~eqn~~f~~f 201 (220)
T COG4359 129 -HIDGQHSIKYTDDSQFGHDK--SSV----IHELSEPNESIFYCGDSVSDLSAAKLSDLLFAKDDLLNYCREQNLNFLEF 201 (220)
T ss_pred -cCCCceeeecCCccccCCCc--chh----HHHhhcCCceEEEecCCcccccHhhhhhhHhhHHHHHHHHHHcCCCCccc
Confidence 122222111 1112222234 333 44455566779999999999999998886544 122222233333334
Q ss_pred cCHhHHHHHHHHHH
Q 024023 239 NSIHNIKEAIPEIW 252 (274)
Q Consensus 239 ~~l~~l~~~l~~~~ 252 (274)
+++.++..-+++..
T Consensus 202 e~F~eIlk~iekvl 215 (220)
T COG4359 202 ETFYEILKEIEKVL 215 (220)
T ss_pred ccHHHHHHHHHHHH
Confidence 45555544444443
No 123
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.87 E-value=1.3e-07 Score=80.85 Aligned_cols=49 Identities=18% Similarity=0.276 Sum_probs=43.2
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
+.+|+.+++.+++.+|++++++++|||+.||++|++.++..++.+.+..
T Consensus 165 ~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~ 213 (249)
T TIGR01485 165 GSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQ 213 (249)
T ss_pred CCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCH
Confidence 5899999999999999999999999999999999998666666676554
No 124
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.86 E-value=2.9e-09 Score=91.32 Aligned_cols=60 Identities=18% Similarity=0.182 Sum_probs=48.8
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-CCCccccccC
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNS 240 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-~~~a~~~~~~ 240 (274)
+..|..+++.+++.+|++++++++|||+.||++|++.+|+.+++.+.... +..+++++.+
T Consensus 186 ~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~ 246 (256)
T TIGR00099 186 GVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDS 246 (256)
T ss_pred CCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecC
Confidence 57789999999999999999999999999999999999998776533222 4456666554
No 125
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.84 E-value=8.3e-09 Score=87.88 Aligned_cols=86 Identities=14% Similarity=0.088 Sum_probs=67.9
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCChHHHH--HHHHHcCCCC-ccceeEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 107 PDPVLRNLLLSM---PQRKIIFTNADQKHAM--EVLGRLGLED-CFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 107 ~~~~~~~~L~~l---~~~~~i~s~~~~~~~~--~~l~~~gl~~-~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
++||+.++|+.| |.+++++||+++.... ..++.+|+.. +|+.|+++.+..
T Consensus 25 ~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~------------------------ 80 (242)
T TIGR01459 25 TYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEIA------------------------ 80 (242)
T ss_pred cCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHHH------------------------
Confidence 456777777666 5889999998877655 7889999997 899999987542
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCC
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGL 220 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~ 220 (274)
.+.+..++++++..++++++|||+..|+......|.
T Consensus 81 ----~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 81 ----VQMILESKKRFDIRNGIIYLLGHLENDIINLMQCYT 116 (242)
T ss_pred ----HHHHHhhhhhccCCCceEEEeCCcccchhhhcCCCc
Confidence 236777778888999999999999999887765554
No 126
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=98.84 E-value=2e-08 Score=80.00 Aligned_cols=76 Identities=18% Similarity=0.281 Sum_probs=56.4
Q ss_pred cEEEEeCCC-------hHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHHH
Q 024023 121 RKIIFTNAD-------QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIR 193 (274)
Q Consensus 121 ~~~i~s~~~-------~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~ 193 (274)
+++|+||+. ...++.+-+.+|+. .+.... .|| ..+..+++
T Consensus 79 ~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp----vl~h~~---------------------------kKP--~~~~~i~~ 125 (168)
T PF09419_consen 79 RVLIVSNSAGSSDDPDGERAEALEKALGIP----VLRHRA---------------------------KKP--GCFREILK 125 (168)
T ss_pred eEEEEECCCCcccCccHHHHHHHHHhhCCc----EEEeCC---------------------------CCC--ccHHHHHH
Confidence 699999973 55666666777753 111111 266 56667777
Q ss_pred HhCC-----CCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCC
Q 024023 194 IANV-----DPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 194 ~~g~-----~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~ 229 (274)
.++. .|+++++|||.. +|+-+|...|+.++++..|-
T Consensus 126 ~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~gv 167 (168)
T PF09419_consen 126 YFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDGV 167 (168)
T ss_pred HHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEEEecCc
Confidence 7654 499999999999 99999999999999997763
No 127
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.83 E-value=3.4e-08 Score=83.75 Aligned_cols=46 Identities=11% Similarity=-0.017 Sum_probs=41.9
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEEC
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG 226 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~ 226 (274)
+++|+.+++.+++++|++++++++|||+.||++|++.+|..+++-+
T Consensus 157 ~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~n 202 (236)
T TIGR02471 157 RASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGN 202 (236)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcC
Confidence 5899999999999999999999999999999999999997776443
No 128
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=98.77 E-value=1.6e-08 Score=80.41 Aligned_cols=90 Identities=20% Similarity=0.280 Sum_probs=58.0
Q ss_pred hhHHHHHHhC---CCcEEEEeCCC---h-----------HHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCccccc
Q 024023 109 PVLRNLLLSM---PQRKIIFTNAD---Q-----------KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENN 171 (274)
Q Consensus 109 ~~~~~~L~~l---~~~~~i~s~~~---~-----------~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~ 171 (274)
|++.+.|+.+ |+.++|+||.. . ..+..+++.+++. + .++.+.....
T Consensus 32 ~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip--~-~~~~a~~~d~-------------- 94 (159)
T PF08645_consen 32 PGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIP--I-QVYAAPHKDP-------------- 94 (159)
T ss_dssp TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS---E-EEEECGCSST--------------
T ss_pred hhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCc--e-EEEecCCCCC--------------
Confidence 3455555555 79999999852 1 2333455566665 3 3344332222
Q ss_pred ccCcccccCCCCCHHHHHHHHHHhCC----CCCeEEEEcCC-----------hhcHHHHHHcCCeEE
Q 024023 172 SFSSNQRILCKPSLEAIETAIRIANV----DPKKTIFFDDS-----------ARNIASAKAAGLHTV 223 (274)
Q Consensus 172 ~~~~~~~~~~kp~~~~~~~~l~~~g~----~~~~~i~VGDs-----------~~Di~~a~~~G~~~v 223 (274)
.+||++.++..++++++. +.++++||||. .+|..-|.++|+.+.
T Consensus 95 --------~RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f~ 153 (159)
T PF08645_consen 95 --------CRKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKFY 153 (159)
T ss_dssp --------TSTTSSHHHHHHCCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--EE
T ss_pred --------CCCCchhHHHHHHHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCccc
Confidence 259999999999999874 88999999996 578999999999864
No 129
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=98.71 E-value=4.3e-08 Score=92.83 Aligned_cols=109 Identities=14% Similarity=0.216 Sum_probs=83.7
Q ss_pred CCCChhHHHHHHhC---CC-cEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 105 LKPDPVLRNLLLSM---PQ-RKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 105 ~~~~~~~~~~L~~l---~~-~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
-.++||+.++++.| |. +++++|+.+...+...++.+|+..+|..+..
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~~~~p----------------------------- 411 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAELLP----------------------------- 411 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhhccCc-----------------------------
Confidence 35779999998888 57 8999999999999999999999877643211
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccc--cCHhHHHHH
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEA 247 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~--~~l~~l~~~ 247 (274)
.+| ..++++++...++++||||+.||+.+++++|+...+-..+.. ...+|+++ +++.+|.+.
T Consensus 412 -~~K----~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~ 477 (536)
T TIGR01512 412 -EDK----LEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQA 477 (536)
T ss_pred -HHH----HHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHH
Confidence 223 345556666668999999999999999999975554322222 45788888 899999874
No 130
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=98.67 E-value=4.2e-07 Score=84.64 Aligned_cols=100 Identities=12% Similarity=0.142 Sum_probs=69.2
Q ss_pred CChhHHHHHHhCCCcEEEEeCCChHHHHHHHHH-cCCCCccceeEecc-cCCCCCCCCCCCCcccccccCccc-ccCCCC
Q 024023 107 PDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGR-LGLEDCFEGIICFE-TINPRLQPADNTDGIENNSFSSNQ-RILCKP 183 (274)
Q Consensus 107 ~~~~~~~~L~~l~~~~~i~s~~~~~~~~~~l~~-~gl~~~fd~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~kp 183 (274)
+.+...+.++..+.. +|+|.+.+..++.+++. +|+ |.+++++ ++. -++ ..+|.+.+. .|.|..
T Consensus 111 l~~~a~~~~~~~g~~-vvVSASp~~~Vepfa~~~LGi----d~VIgTeLev~--------~~G-~~TG~i~g~~~c~Ge~ 176 (497)
T PLN02177 111 VHPETWRVFNSFGKR-YIITASPRIMVEPFVKTFLGA----DKVLGTELEVS--------KSG-RATGFMKKPGVLVGDH 176 (497)
T ss_pred cCHHHHHHHHhCCCE-EEEECCcHHHHHHHHHHcCCC----CEEEecccEEC--------cCC-EEeeeecCCCCCccHH
Confidence 567788888887754 99999999999999976 676 5666665 110 011 255555554 466665
Q ss_pred CHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEE
Q 024023 184 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVI 224 (274)
Q Consensus 184 ~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~ 224 (274)
|...++ +.+|.+... ++.|||.+|..+...++-..+.
T Consensus 177 Kv~rl~---~~~g~~~~~-~aYgDS~sD~plL~~a~e~y~V 213 (497)
T PLN02177 177 KRDAVL---KEFGDALPD-LGLGDRETDHDFMSICKEGYMV 213 (497)
T ss_pred HHHHHH---HHhCCCCce-EEEECCccHHHHHHhCCccEEe
Confidence 555554 455654444 8999999999999999966543
No 131
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.65 E-value=7.6e-07 Score=76.40 Aligned_cols=48 Identities=17% Similarity=0.170 Sum_probs=43.4
Q ss_pred CCCCHHHHHHHHHHhCCC--CCeEEEEcCChhcHHHHHHcCCeEEEECCC
Q 024023 181 CKPSLEAIETAIRIANVD--PKKTIFFDDSARNIASAKAAGLHTVIVGSS 228 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~--~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~ 228 (274)
+..|..+++.+++.+|++ .+++++|||+.||+.|.+.+|.++++-+..
T Consensus 174 ~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~ 223 (256)
T TIGR01486 174 GSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPN 223 (256)
T ss_pred CCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCC
Confidence 477888999999999999 999999999999999999999888876654
No 132
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=98.65 E-value=5.3e-08 Score=92.67 Aligned_cols=121 Identities=13% Similarity=0.229 Sum_probs=86.6
Q ss_pred CCCChhHHHHHHhC---C-CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 105 LKPDPVLRNLLLSM---P-QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 105 ~~~~~~~~~~L~~l---~-~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
-.++||+.++++.| | .+++++|+.+...+...++.+|+..+|..+..
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~~~~p----------------------------- 433 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHAELLP----------------------------- 433 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeeccCCH-----------------------------
Confidence 45789999998888 6 78999999999999999999999877754311
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCcccccc--CHhHHHHHHHHHHhhcc
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALN--SIHNIKEAIPEIWEGEG 256 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~--~l~~l~~~l~~~~~~~~ 256 (274)
++|+ .++++++..+.+++||||+.||+++++++|+.+.+- ++.. ...+|+++. ++..+.+.+ ++.....
T Consensus 434 -~~K~----~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~~~~~~~l~~~i-~~~r~~~ 506 (556)
T TIGR01525 434 -EDKL----AIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAI-DLSRKTR 506 (556)
T ss_pred -HHHH----HHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHH-HHHHHHH
Confidence 2223 344555556789999999999999999999665543 3222 456888887 677777753 3333333
Q ss_pred cchhh
Q 024023 257 EQLEQ 261 (274)
Q Consensus 257 ~~~~~ 261 (274)
..+.+
T Consensus 507 ~~i~~ 511 (556)
T TIGR01525 507 RIIKQ 511 (556)
T ss_pred HHHHH
Confidence 33333
No 133
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=98.64 E-value=1.8e-08 Score=80.44 Aligned_cols=115 Identities=16% Similarity=0.139 Sum_probs=89.1
Q ss_pred CCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCC-ccceeEecccCCCCCCCCCCCCcccccccCcccccCC
Q 024023 105 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLED-CFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 181 (274)
Q Consensus 105 ~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~-~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (274)
+..-||+.++|+.|. +.++|.|++....+..+++.++... +|+.+++.++....
T Consensus 41 v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~~----------------------- 97 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVFT----------------------- 97 (162)
T ss_pred EEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEEe-----------------------
Confidence 456799999999994 7899999999999999999999875 89999998865532
Q ss_pred CCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCCccccccCHhHHHHHHHHHH
Q 024023 182 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIW 252 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~~~~ 252 (274)
+|+ +.+.++.+|.+++++++|||++.|+.++.++|+.+...... ..|. .|.+|.++|+.+.
T Consensus 98 ~~~---~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~f~~~----~~D~---~L~~l~~~L~~l~ 158 (162)
T TIGR02251 98 NGK---YVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSWFGD----PNDT---ELLNLIPFLEGLR 158 (162)
T ss_pred CCC---EEeEchhcCCChhhEEEEeCChhhhccCccCEeecCCCCCC----CCHH---HHHHHHHHHHHHh
Confidence 444 56778889999999999999999999999999886644321 1111 2555666665543
No 134
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=98.64 E-value=2.9e-07 Score=68.88 Aligned_cols=115 Identities=15% Similarity=0.144 Sum_probs=92.2
Q ss_pred CCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 105 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 105 ~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
-.+++.+.+.++.|. .+++|.|+.....+...++-.|+. .+.++..
T Consensus 29 Gklf~ev~e~iqeL~d~V~i~IASgDr~gsl~~lae~~gi~--~~rv~a~------------------------------ 76 (152)
T COG4087 29 GKLFSEVSETIQELHDMVDIYIASGDRKGSLVQLAEFVGIP--VERVFAG------------------------------ 76 (152)
T ss_pred cEEcHhhHHHHHHHHHhheEEEecCCcchHHHHHHHHcCCc--eeeeecc------------------------------
Confidence 456788888888775 889999999999999999988875 4455543
Q ss_pred CCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC----CCCccccccCHhHHHHHHHHH
Q 024023 183 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIKEAIPEI 251 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~----~~~a~~~~~~l~~l~~~l~~~ 251 (274)
.+++....+++.++-+.+.+++|||+.||+.+.+++.++.+-+..... ...+|+++.++.++.+++...
T Consensus 77 a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~~~ 149 (152)
T COG4087 77 ADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLLKDT 149 (152)
T ss_pred cCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHhhcc
Confidence 235677888888888889999999999999999999998877764332 457999999999999886543
No 135
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=98.62 E-value=4.7e-08 Score=80.23 Aligned_cols=165 Identities=15% Similarity=0.210 Sum_probs=90.0
Q ss_pred EEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCC----cchHHHHHHHHHHHhcCcHHHHHHhcCCCChHHHHHHHhcc
Q 024023 24 LLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHID----ESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGK 99 (274)
Q Consensus 24 viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (274)
|.+|+||||.|....+...+ .+.++.. ...... ......+|. ..+...+.+.+.+...
T Consensus 5 I~iDiDgVLad~~~~~~~~~--------n~~~~~~~~~~~~~~~~--~~~~~~~g~--------~~~e~~~~~~~~~~~~ 66 (191)
T PF06941_consen 5 IAIDIDGVLADFNSAFIEWF--------NEEFGKNPELTPEDITG--YWDWEKWGI--------TEPEFYEKLWRFYEEP 66 (191)
T ss_dssp EEEESBTTTB-HHHHHHHHH--------HHHTTTS----GGGGTS--SSHHHHHHH--------HSTTHHHHHHHHHTST
T ss_pred EEEECCCCCcccHHHHHHHH--------HHHcCCCCCCCHHHhhh--hhHHHHhCC--------CCHHHHHHHHHHHhCh
Confidence 89999999999555444433 3444444 111110 011111111 1112234455555555
Q ss_pred CCCCCCCCChhHHHHHHhCC---CcEEEEeCCChH-------HHHHHHHHc-CCCCccceeEecccCCCCCCCCCCCCcc
Q 024023 100 LPYEKLKPDPVLRNLLLSMP---QRKIIFTNADQK-------HAMEVLGRL-GLEDCFEGIICFETINPRLQPADNTDGI 168 (274)
Q Consensus 100 ~~~~~~~~~~~~~~~L~~l~---~~~~i~s~~~~~-------~~~~~l~~~-gl~~~fd~i~~~~~~~~~~~~~~~~~~~ 168 (274)
..+..++|+||+.+.|+.|. ...+++|+.+.. .....+++. |... ++.++.+.+
T Consensus 67 ~~f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~-~~~~~~~~~-------------- 131 (191)
T PF06941_consen 67 GFFSNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIP-YDNLIFTGD-------------- 131 (191)
T ss_dssp TTTTT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHH-HCCEEEESS--------------
T ss_pred hhhcCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCc-hheEEEecC--------------
Confidence 55678999999999999983 457777765432 334445443 3211 233333211
Q ss_pred cccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCC-ccccccCHhHHHHH
Q 024023 169 ENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPP-ADHALNSIHNIKEA 247 (274)
Q Consensus 169 ~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~-a~~~~~~l~~l~~~ 247 (274)
|. .++. + ++|+|++..+..+.+.|++.+++..+.++.. .-..+.+..++.+.
T Consensus 132 -------------K~----------~v~~--D--vlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~~~~~Rv~~W~ei~~~ 184 (191)
T PF06941_consen 132 -------------KT----------LVGG--D--VLIDDRPHNLEQFANAGIPVILFDQPYNRDESNFPRVNNWEEIEDL 184 (191)
T ss_dssp -------------GG----------GC----S--EEEESSSHHHSS-SSESSEEEEE--GGGTT--TSEEE-STTSHHHH
T ss_pred -------------CC----------eEec--c--EEecCChHHHHhccCCCceEEEEcCCCCCCCCCCccCCCHHHHHHH
Confidence 31 1122 2 8999999999999999999999988877443 47889999998876
Q ss_pred H
Q 024023 248 I 248 (274)
Q Consensus 248 l 248 (274)
+
T Consensus 185 i 185 (191)
T PF06941_consen 185 I 185 (191)
T ss_dssp H
T ss_pred H
Confidence 5
No 136
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.61 E-value=3.4e-07 Score=78.66 Aligned_cols=103 Identities=18% Similarity=0.208 Sum_probs=68.7
Q ss_pred hhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCC-CCCCcccccccCccc----c--
Q 024023 109 PVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPA-DNTDGIENNSFSSNQ----R-- 178 (274)
Q Consensus 109 ~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~-- 178 (274)
|++.++|+.| |.+++|+|++.+..+...++.+|+..+|+.++++.+....| |+ +..|......+.+.+ .
T Consensus 149 PgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~~k-p~~e~~d~~~~~~~~~~~f~~d~~~ 227 (301)
T TIGR01684 149 PRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAEEY-STMSTEDRQYRYVFTKTPFYLNTTD 227 (301)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccccCC-CCccccccccceEEecCCeEEeCCC
Confidence 4555555555 68899999999999999999999999999999998876653 22 222222211111111 1
Q ss_pred cCCCC-CHHHHHHHHHHhCCCC-CeEEEEcCCh-hcH
Q 024023 179 ILCKP-SLEAIETAIRIANVDP-KKTIFFDDSA-RNI 212 (274)
Q Consensus 179 ~~~kp-~~~~~~~~l~~~g~~~-~~~i~VGDs~-~Di 212 (274)
...-| +|..+...|++.|+.. +.+-.|+|=. ||+
T Consensus 228 ~~~lPKSprvvl~yL~~~gvn~~KtitLVDDl~~Nn~ 264 (301)
T TIGR01684 228 GKRLPKSPRVVLWYLYDLGVNYFKSITLVDDLADNNF 264 (301)
T ss_pred CCcCCCCCeehHHHHHHcCCceeeeEEEeccCcccCc
Confidence 11223 3678888999999976 4455788877 554
No 137
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.53 E-value=2.6e-06 Score=73.48 Aligned_cols=43 Identities=16% Similarity=0.174 Sum_probs=36.3
Q ss_pred CCCHHHHHHHHHHhCCC--CCeEEEEcCChhcHHHHHHcCCeEEE
Q 024023 182 KPSLEAIETAIRIANVD--PKKTIFFDDSARNIASAKAAGLHTVI 224 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~--~~~~i~VGDs~~Di~~a~~~G~~~v~ 224 (274)
.+|..+++.+.+.|... +-.++.+|||+||+.|...+.+.++.
T Consensus 207 ~dKg~A~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~D~~vvi 251 (302)
T PRK12702 207 LPGEQAVQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWSEQKVVL 251 (302)
T ss_pred CCHHHHHHHHHHHHHhccCCceEEEecCChhhHHHHHhCCeeEEe
Confidence 56788888888888764 45899999999999999999988774
No 138
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=98.52 E-value=5e-07 Score=90.40 Aligned_cols=136 Identities=17% Similarity=0.229 Sum_probs=98.8
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
++.|++.+.++.| |.+++++|+.+...+....+.+|+...++.++++++.... +.-.-.....+......
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~-------~~~~l~~~~~~~~Vfar 600 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAM-------DDQQLSQIVPKVAVFAR 600 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhC-------CHHHHHHHhhcCeEEEE
Confidence 5578888888777 6899999999999999999999998777777777654321 00000001112223346
Q ss_pred CCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccc--cCHhHHHHHH
Q 024023 183 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAI 248 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~--~~l~~l~~~l 248 (274)
..|+-...+.+.+......+.++||+.||..+++.|+++..+-..+.. +..+|+++ +++..+...+
T Consensus 601 ~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i 670 (884)
T TIGR01522 601 ASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAI 670 (884)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHH
Confidence 777777888887777778999999999999999999987665323333 56789999 6688888754
No 139
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=98.51 E-value=7.3e-07 Score=84.80 Aligned_cols=46 Identities=11% Similarity=0.068 Sum_probs=41.3
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEE--cCChhcHHHHHHcCCeEEEEC
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFF--DDSARNIASAKAAGLHTVIVG 226 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~V--GDs~~Di~~a~~~G~~~v~v~ 226 (274)
+-.|..+++.+++.+|++.++++.| ||+.||++|.+.+|.++++-.
T Consensus 611 gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM~~ 658 (694)
T PRK14502 611 GNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILVQR 658 (694)
T ss_pred CCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEEcC
Confidence 4677899999999999999999988 999999999999999887643
No 140
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=98.46 E-value=1e-06 Score=83.89 Aligned_cols=121 Identities=16% Similarity=0.228 Sum_probs=84.2
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCC
Q 024023 105 LKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 181 (274)
Q Consensus 105 ~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (274)
-.++|++.++++.| |.+++++|+.+...+...++.+|+. +| . + .. .
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-~~----~-~-~~------------------------p 452 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-VR----A-E-VL------------------------P 452 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-EE----c-c-CC------------------------h
Confidence 35678988888777 5889999999999999999999995 22 1 1 10 1
Q ss_pred CCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccc--cCHhHHHHHHHHHHhhccc
Q 024023 182 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAIPEIWEGEGE 257 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~--~~l~~l~~~l~~~~~~~~~ 257 (274)
++|.+.+ +++..++++++||||+.||+.+++++|++..+- .+.. ...+|+++ +++..|.+.+ ++......
T Consensus 453 ~~K~~~v----~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g-~g~~~a~~~Advvl~~~~l~~l~~~i-~lsr~~~~ 526 (562)
T TIGR01511 453 DDKAALI----KELQEKGRVVAMVGDGINDAPALAQADVGIAIG-AGTDVAIEAADVVLMRNDLNDVATAI-DLSRKTLR 526 (562)
T ss_pred HHHHHHH----HHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeC-CcCHHHHhhCCEEEeCCCHHHHHHHH-HHHHHHHH
Confidence 3334444 444446789999999999999999999875443 3332 45688888 4888887743 34444444
Q ss_pred chhhh
Q 024023 258 QLEQV 262 (274)
Q Consensus 258 ~~~~~ 262 (274)
.+.|+
T Consensus 527 ~i~qn 531 (562)
T TIGR01511 527 RIKQN 531 (562)
T ss_pred HHHHH
Confidence 44443
No 141
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.36 E-value=6.8e-07 Score=75.28 Aligned_cols=43 Identities=12% Similarity=0.145 Sum_probs=37.2
Q ss_pred CCCCHHHHHHHHHHhCC--CCCeEEEEcCChhcHHHHHHcCCeEE
Q 024023 181 CKPSLEAIETAIRIANV--DPKKTIFFDDSARNIASAKAAGLHTV 223 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~--~~~~~i~VGDs~~Di~~a~~~G~~~v 223 (274)
+-.|+.+++.+++.+++ .++++++|||+.||+.|.+.+|++++
T Consensus 179 ~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~ 223 (225)
T TIGR02461 179 GSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFL 223 (225)
T ss_pred CCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEe
Confidence 45668889999999876 66789999999999999999998765
No 142
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=98.35 E-value=2.8e-06 Score=73.21 Aligned_cols=104 Identities=19% Similarity=0.186 Sum_probs=65.7
Q ss_pred hhHHHHHH---hCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCccc----cc--
Q 024023 109 PVLRNLLL---SMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQ----RI-- 179 (274)
Q Consensus 109 ~~~~~~L~---~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-- 179 (274)
|++.++|+ ..|.+++|+|++++..+...++.+|+..+|+.++++++......-....|......+.+.+ ..
T Consensus 151 p~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~~~ 230 (303)
T PHA03398 151 PFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDVTDV 230 (303)
T ss_pred hhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCcccccccceeecccceeEEecCceeEeCCcc
Confidence 34444444 4468999999999999999999999999999999988654321101111211111111111 11
Q ss_pred CCCC-CHHHHHHHHHHhCCCC-CeEEEEcCCh-hcH
Q 024023 180 LCKP-SLEAIETAIRIANVDP-KKTIFFDDSA-RNI 212 (274)
Q Consensus 180 ~~kp-~~~~~~~~l~~~g~~~-~~~i~VGDs~-~Di 212 (274)
..-| +|..+...|++.|+.. +.+-.|+|=. ||+
T Consensus 231 ~~lPKSprvVl~yL~~~gvn~~KtiTLVDDl~~Nn~ 266 (303)
T PHA03398 231 KNLPKSPRVVLWYLRKKGVNYFKTITLVDDLKSNNY 266 (303)
T ss_pred cCCCCCCeehHHHHHHcCcceeccEEEeccCcccCc
Confidence 1223 3678889999999976 4455888877 564
No 143
>PLN02382 probable sucrose-phosphatase
Probab=98.33 E-value=1.3e-05 Score=73.44 Aligned_cols=49 Identities=14% Similarity=0.148 Sum_probs=41.3
Q ss_pred CCCCHHHHHHHHHHh---CCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 181 CKPSLEAIETAIRIA---NVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~---g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
+-.|..+++.+++++ |+++++++++||+.||++|.+.+|...+.+.+..
T Consensus 173 g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~ 224 (413)
T PLN02382 173 GAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQ 224 (413)
T ss_pred CCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCc
Confidence 467789999999999 9999999999999999999999995344454444
No 144
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=98.27 E-value=2e-06 Score=73.51 Aligned_cols=47 Identities=19% Similarity=0.314 Sum_probs=37.5
Q ss_pred CCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 182 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
-.|..+++.+++++++++++++++|||.||+.|. ..+...+.|.+..
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~Na~ 210 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGNAQ 210 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TTS-
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcCCC
Confidence 5678999999999999999999999999999999 6666778787644
No 145
>PRK10671 copA copper exporting ATPase; Provisional
Probab=98.25 E-value=5.5e-06 Score=82.60 Aligned_cols=109 Identities=11% Similarity=0.169 Sum_probs=81.6
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
++.|++.+.++.| +++++++|+.....+..+++.+|+..+|..+ .
T Consensus 650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~~~~~~--------------------------------~ 697 (834)
T PRK10671 650 PLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGV--------------------------------L 697 (834)
T ss_pred cchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCEEEeCC--------------------------------C
Confidence 5578888887777 5889999999999999999999997544321 1
Q ss_pred CCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC----CCCccccccCHhHHHHHHH
Q 024023 183 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIKEAIP 249 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~----~~~a~~~~~~l~~l~~~l~ 249 (274)
|+....++++++.+++++++|||+.||+.+++.+|++.++- ++.. .+...+..+++..|.+.+.
T Consensus 698 --p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g-~g~~~a~~~ad~vl~~~~~~~i~~~i~ 765 (834)
T PRK10671 698 --PDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMG-GGSDVAIETAAITLMRHSLMGVADALA 765 (834)
T ss_pred --HHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHH
Confidence 22345677777778899999999999999999999976554 3332 2334455578888887653
No 146
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=98.22 E-value=2.7e-05 Score=65.25 Aligned_cols=106 Identities=10% Similarity=0.050 Sum_probs=64.8
Q ss_pred hHHHHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHH---HHHHHHHcCCCCccceeEecccCCCCCCCC
Q 024023 89 NDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKH---AMEVLGRLGLEDCFEGIICFETINPRLQPA 162 (274)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~---~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~ 162 (274)
...+.++... ...++.|++.++++.+ |++++++|+.+... +..-|...|+..+ +.++-......
T Consensus 107 ~~~~~~wv~~----~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~-~~LiLR~~~d~----- 176 (229)
T TIGR01675 107 PTAFWLWLGK----GAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW-KHLILRGLEDS----- 176 (229)
T ss_pred HHHHHHHHHc----CCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc-CeeeecCCCCC-----
Confidence 4445555443 4458889999988877 68999999998766 6677788888765 66555431111
Q ss_pred CCCCcccccccCcccccCCCC----CHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEEC
Q 024023 163 DNTDGIENNSFSSNQRILCKP----SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG 226 (274)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~kp----~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~ 226 (274)
+++ |.+...++. +-|... +..|||..+|+.. ..+|..+.-.+
T Consensus 177 ------------------~~~~~~yKs~~R~~l~-~~GYrI--v~~iGDq~sDl~G-~~~~~RtFKLP 222 (229)
T TIGR01675 177 ------------------NKTVVTYKSEVRKSLM-EEGYRI--WGNIGDQWSDLLG-SPPGRRTFKLP 222 (229)
T ss_pred ------------------CchHhHHHHHHHHHHH-hCCceE--EEEECCChHHhcC-CCccCceeeCC
Confidence 122 222332322 223322 5688999999954 34555554443
No 147
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=98.20 E-value=5.8e-06 Score=70.49 Aligned_cols=71 Identities=13% Similarity=0.131 Sum_probs=62.2
Q ss_pred CCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHc-------CCeEEEECCCCCCCCccccccCHhHHHHHHHHHH
Q 024023 182 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA-------GLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIW 252 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~-------G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~~~~ 252 (274)
..|+.+++.++++++..++++++|||+.||+.|++.+ |..++.+.++.....|++++++.+++..+|..+.
T Consensus 166 ~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~~~~~A~~~~~~~~~v~~~L~~l~ 243 (244)
T TIGR00685 166 VNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGSKKTVAKFHLTGPQQVLEFLGLLV 243 (244)
T ss_pred CCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCCcCCCceEeCCCHHHHHHHHHHHh
Confidence 3457899999999999999999999999999999998 6677777767667889999999999999887764
No 148
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=98.19 E-value=3.8e-05 Score=70.65 Aligned_cols=118 Identities=20% Similarity=0.219 Sum_probs=66.4
Q ss_pred CCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHc---------CCCCccceeEecccCCCCCCCCCCCCccc--
Q 024023 104 KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRL---------GLEDCFEGIICFETINPRLQPADNTDGIE-- 169 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~---------gl~~~fd~i~~~~~~~~~~~~~~~~~~~~-- 169 (274)
.+...|.+..+|+.+ |.++.++||++...+...+..+ .+.++||.|++.-.- |.=|.+...
T Consensus 181 Yi~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~K-----P~FF~~~~pfr 255 (448)
T PF05761_consen 181 YIHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARK-----PGFFTEGRPFR 255 (448)
T ss_dssp CEE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--C-----CHHHCT---EE
T ss_pred HccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCC-----CcccCCCCceE
Confidence 445567888888777 5789999999999999888764 356899999875421 110000000
Q ss_pred ----ccccCcccc---cCCCC---CHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHc-CCeEEEEC
Q 024023 170 ----NNSFSSNQR---ILCKP---SLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAA-GLHTVIVG 226 (274)
Q Consensus 170 ----~~~~~~~~~---~~~kp---~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~-G~~~v~v~ 226 (274)
.++...... ...++ ...-...+.+-+|...+++++|||+. .||...+.. ||.+++|-
T Consensus 256 ~vd~~~g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii 324 (448)
T PF05761_consen 256 EVDTETGKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAII 324 (448)
T ss_dssp EEETTTSSEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-
T ss_pred EEECCCCccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEe
Confidence 111111100 00011 12345566677788889999999999 798777765 99999883
No 149
>PLN02423 phosphomannomutase
Probab=98.15 E-value=3.4e-05 Score=65.79 Aligned_cols=42 Identities=14% Similarity=0.027 Sum_probs=35.2
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcC----ChhcHHHHHHcCCeEEEECC
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDD----SARNIASAKAAGLHTVIVGS 227 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGD----s~~Di~~a~~~G~~~v~v~~ 227 (274)
+..|..+++.++ +++++++||| +.||++|.+..|+.++-|..
T Consensus 187 gvnKg~al~~L~-----~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~ 232 (245)
T PLN02423 187 GWDKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTS 232 (245)
T ss_pred CCCHHHHHHHhc-----CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCC
Confidence 567788888877 8999999999 79999999888888776643
No 150
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=98.10 E-value=2e-05 Score=79.26 Aligned_cols=135 Identities=12% Similarity=0.138 Sum_probs=89.0
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCc----cceeEecccCCCCCCCCCCCCcccccccCcccc
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDC----FEGIICFETINPRLQPADNTDGIENNSFSSNQR 178 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~----fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (274)
++.|++.+.++.| |.+++++|+.....+....+.+|+... .+..+++.+.... +.-..........
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~-------~~~~~~~~~~~~~ 609 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEM-------GPAKQRAACRSAV 609 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhC-------CHHHHHHhhhcCe
Confidence 3567888887776 699999999999999999999998531 1123333221110 0000000011112
Q ss_pred cCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccccC--HhHHHHHH
Q 024023 179 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNS--IHNIKEAI 248 (274)
Q Consensus 179 ~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~~--l~~l~~~l 248 (274)
..+...|+-...+.+.++...+.+.++||+.||+.|.+.++++.++- .+.. +..+|+++.+ +..+.+.+
T Consensus 610 v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i 682 (917)
T TIGR01116 610 LFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAV 682 (917)
T ss_pred EEEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHH
Confidence 22345566667777777766788889999999999999999976654 4433 5579999987 88877764
No 151
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=98.05 E-value=8.5e-06 Score=68.74 Aligned_cols=99 Identities=11% Similarity=0.041 Sum_probs=57.1
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCCh---HHHHHHHHHcCCCCccceeE-ecccCCCCCCCCCCCCcccccccCcccc
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQ---KHAMEVLGRLGLEDCFEGII-CFETINPRLQPADNTDGIENNSFSSNQR 178 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~---~~~~~~l~~~gl~~~fd~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (274)
+++|++.++++.+ |..++++|+.+. .....-|.+.|...+ +.++ -.+..... ..
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~-~~l~lr~~~~~~~-----------------~~- 175 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW-DHLILRPDKDPSK-----------------KS- 175 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB-SCGEEEEESSTSS--------------------
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc-chhcccccccccc-----------------cc-
Confidence 7778888887776 799999999655 455566778887654 4444 33321110 00
Q ss_pred cCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHc---CCeEEEECC
Q 024023 179 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA---GLHTVIVGS 227 (274)
Q Consensus 179 ~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~---G~~~v~v~~ 227 (274)
-..-|......+.++ |... ++.|||..+|+..++.. |...+..++
T Consensus 176 -~~~yK~~~r~~i~~~-Gy~I--i~~iGD~~~D~~~~~~~~~~~~r~f~lPN 223 (229)
T PF03767_consen 176 -AVEYKSERRKEIEKK-GYRI--IANIGDQLSDFSGAKTAGARAERWFKLPN 223 (229)
T ss_dssp -----SHHHHHHHHHT-TEEE--EEEEESSGGGCHCTHHHHHHHTTEEE-TT
T ss_pred -ccccchHHHHHHHHc-CCcE--EEEeCCCHHHhhcccccccccceEEEcCC
Confidence 001133444444444 4432 78999999999884433 345554444
No 152
>COG4996 Predicted phosphatase [General function prediction only]
Probab=98.03 E-value=1.1e-05 Score=60.46 Aligned_cols=83 Identities=16% Similarity=0.213 Sum_probs=58.6
Q ss_pred CCCCCChhHHHHHHhCCCcEEEEeC---CChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCccccc
Q 024023 103 EKLKPDPVLRNLLLSMPQRKIIFTN---ADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 179 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l~~~~~i~s~---~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (274)
..+.++|.+++++++++...+|+|. ....-+...|+.+++..||+.++.-..
T Consensus 38 ~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~~yFhy~ViePh------------------------- 92 (164)
T COG4996 38 REVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLLQYFHYIVIEPH------------------------- 92 (164)
T ss_pred eEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchhhhEEEEEecCC-------------------------
Confidence 4568899999999999766665554 455667778899999999988776331
Q ss_pred CCCCCHHHHHHHHHHh------CCCCCeEEEEcCChhcH
Q 024023 180 LCKPSLEAIETAIRIA------NVDPKKTIFFDDSARNI 212 (274)
Q Consensus 180 ~~kp~~~~~~~~l~~~------g~~~~~~i~VGDs~~Di 212 (274)
--|.-++.+++... -++|.+++|++|..--+
T Consensus 93 --P~K~~ML~~llr~i~~er~~~ikP~~Ivy~DDR~iH~ 129 (164)
T COG4996 93 --PYKFLMLSQLLREINTERNQKIKPSEIVYLDDRRIHF 129 (164)
T ss_pred --ChhHHHHHHHHHHHHHhhccccCcceEEEEecccccH
Confidence 01123444555443 46899999999998443
No 153
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=97.97 E-value=5.8e-05 Score=62.67 Aligned_cols=93 Identities=19% Similarity=0.271 Sum_probs=63.3
Q ss_pred CCChHHHHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHH----HHHHHHHcCCCCccce-eEecccCCC
Q 024023 86 EFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKH----AMEVLGRLGLEDCFEG-IICFETINP 157 (274)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~----~~~~l~~~gl~~~fd~-i~~~~~~~~ 157 (274)
.+.++.+.++... ....+.||+.+++++. |..++.+||.+.+. ...-|++.|+....+. ++...+
T Consensus 106 ~f~pe~Wd~wV~a----~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~llkk~--- 178 (274)
T COG2503 106 GFTPETWDKWVQA----KKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHLLLKKD--- 178 (274)
T ss_pred CCCccchHHHHhh----cccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccceEEeeC---
Confidence 3446666666654 4568999999999988 58899999987765 4456677788765443 333322
Q ss_pred CCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcH
Q 024023 158 RLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNI 212 (274)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di 212 (274)
.+++..-...+-+ ..+-++.|||+..|.
T Consensus 179 -----------------------~k~Ke~R~~~v~k----~~~iVm~vGDNl~DF 206 (274)
T COG2503 179 -----------------------KKSKEVRRQAVEK----DYKIVMLVGDNLDDF 206 (274)
T ss_pred -----------------------CCcHHHHHHHHhh----ccceeeEecCchhhh
Confidence 2566555555544 345589999999874
No 154
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=97.86 E-value=0.00019 Score=56.94 Aligned_cols=101 Identities=13% Similarity=0.095 Sum_probs=56.8
Q ss_pred ChhHHHHHHhC---CCcEEEEeCCChHHHH---HHHHHc---CCCCccceeEecccCCCCCCCCCCCCcccccccCcccc
Q 024023 108 DPVLRNLLLSM---PQRKIIFTNADQKHAM---EVLGRL---GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR 178 (274)
Q Consensus 108 ~~~~~~~L~~l---~~~~~i~s~~~~~~~~---~~l~~~---gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (274)
.|++.++++.+ |.+++++|+.+..... ..++.+ |..-....+++++..... ......
T Consensus 29 ~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~--------------~~~~e~ 94 (157)
T smart00775 29 HPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFA--------------ALHREV 94 (157)
T ss_pred CHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchh--------------hhhccc
Confidence 35666666655 6889999999887763 666662 211112345555432110 000011
Q ss_pred cCCCC---CHHHHHHHHHHhCCCCCeE-EEEcCChhcHHHHHHcCCeE
Q 024023 179 ILCKP---SLEAIETAIRIANVDPKKT-IFFDDSARNIASAKAAGLHT 222 (274)
Q Consensus 179 ~~~kp---~~~~~~~~l~~~g~~~~~~-i~VGDs~~Di~~a~~~G~~~ 222 (274)
...+| |.+.+..+.+-+.-..-.. +.+||+.+|+.+-+++|+..
T Consensus 95 i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~~ 142 (157)
T smart00775 95 ISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIPP 142 (157)
T ss_pred ccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCCh
Confidence 11233 4556666665443222233 45899999999999999964
No 155
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=97.84 E-value=0.0012 Score=56.52 Aligned_cols=118 Identities=22% Similarity=0.182 Sum_probs=68.9
Q ss_pred hhHHHHHHhCCCcEEEEeCCChHHHHHH---HHHcCCCCccceeEecccCCCCCCCCCCCCccc-ccccCccc-ccCCCC
Q 024023 109 PVLRNLLLSMPQRKIIFTNADQKHAMEV---LGRLGLEDCFEGIICFETINPRLQPADNTDGIE-NNSFSSNQ-RILCKP 183 (274)
Q Consensus 109 ~~~~~~L~~l~~~~~i~s~~~~~~~~~~---l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~kp 183 (274)
|.+.+-|+.-+.+++.+|..+..+.... |+++|++ |+.-...++.... -| ...+... ...+.++. .+.+-+
T Consensus 87 ~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~--fs~~~~~~~~~~~-~~-~~~~~~~~~~~~~~GIlft~~~~ 162 (252)
T PF11019_consen 87 PNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGID--FSSSSFPEDGIIS-FP-VFDSALSRAPSFYDGILFTGGQD 162 (252)
T ss_pred HHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCC--ccccccccCccee-cc-cccCCCCCCceeecCeEEeCCCc
Confidence 4444445555788999999877655544 4556665 4332111110000 00 0000000 11122222 223467
Q ss_pred CHHHHHHHHHHhCCCCCeEEEEcCChhcHHHH----HHcCCeEEEECCCCC
Q 024023 184 SLEAIETAIRIANVDPKKTIFFDDSARNIASA----KAAGLHTVIVGSSVP 230 (274)
Q Consensus 184 ~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a----~~~G~~~v~v~~~~~ 230 (274)
+++++..++.+.|..|+.+|||+|+...+... ++.|+.+.++.....
T Consensus 163 KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt~~ 213 (252)
T PF11019_consen 163 KGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYTGA 213 (252)
T ss_pred cHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEcch
Confidence 78999999999999999999999999776544 447888888765443
No 156
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=97.79 E-value=0.00016 Score=70.00 Aligned_cols=107 Identities=11% Similarity=0.070 Sum_probs=78.0
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
++.|++.+.++.| |++++++|+.+..-+..+.+.+|+.++|. .
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~v~A----------------------------------~ 486 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDRFVA----------------------------------E 486 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCceEEc----------------------------------C
Confidence 4457877776666 68999999999999999999999975332 2
Q ss_pred CCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccc--cCHhHHHHH
Q 024023 183 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEA 247 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~--~~l~~l~~~ 247 (274)
-.|+-..++.+++.-....+.|+||+.||..+.+.+.++.++- +|.. +..+|.++ +++..+.+.
T Consensus 487 ~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~ls~Iv~a 554 (673)
T PRK14010 487 CKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLDSNPTKLMEV 554 (673)
T ss_pred CCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHHHHhCCEEEcCCCHHHHHHH
Confidence 2355556666666655577999999999999999999987755 5553 45555554 345555543
No 157
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=97.78 E-value=1.7e-05 Score=67.00 Aligned_cols=63 Identities=21% Similarity=0.225 Sum_probs=51.4
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-CCCccccccCHhH
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNSIHN 243 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-~~~a~~~~~~l~~ 243 (274)
+-.|..+++.+++.+|++++++++|||+.||++|.+.+|.++++-+.... +..|++++.+-.+
T Consensus 184 ~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~ 247 (254)
T PF08282_consen 184 GVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNND 247 (254)
T ss_dssp TSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTC
T ss_pred CCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCC
Confidence 46779999999999999999999999999999999999988664433332 5667777777666
No 158
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=97.78 E-value=0.0002 Score=70.53 Aligned_cols=122 Identities=20% Similarity=0.265 Sum_probs=82.2
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
++.|++.+.++.| |.+++++|+.+...+..+.+.+|+..+++ . .
T Consensus 568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~~~~-------~--------------------------~ 614 (741)
T PRK11033 568 TLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDFRAG-------L--------------------------L 614 (741)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCeecC-------C--------------------------C
Confidence 5678888887777 68999999999999999999999963221 0 2
Q ss_pred CCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccc--cCHhHHHHHHHHHHhhcccc
Q 024023 183 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAIPEIWEGEGEQ 258 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~--~~l~~l~~~l~~~~~~~~~~ 258 (274)
| +-...++++++ .+.+++||||+.||..+++.++++.++. .+.. ...+|.++ +++..|.+.+ .+.......
T Consensus 615 p--~~K~~~v~~l~-~~~~v~mvGDgiNDapAl~~A~vgia~g-~~~~~a~~~adivl~~~~l~~l~~~i-~~sr~~~~~ 689 (741)
T PRK11033 615 P--EDKVKAVTELN-QHAPLAMVGDGINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMI-ELSRATHAN 689 (741)
T ss_pred H--HHHHHHHHHHh-cCCCEEEEECCHHhHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHH-HHHHHHHHH
Confidence 2 12223444444 2368999999999999999999887654 3332 23455544 6777777533 444555555
Q ss_pred hhhhcch
Q 024023 259 LEQVIQP 265 (274)
Q Consensus 259 ~~~~~~~ 265 (274)
+.|++.=
T Consensus 690 I~~nl~~ 696 (741)
T PRK11033 690 IRQNITI 696 (741)
T ss_pred HHHHHHH
Confidence 5555443
No 159
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=97.74 E-value=0.00065 Score=58.14 Aligned_cols=49 Identities=12% Similarity=0.049 Sum_probs=35.2
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCCChH---HHHHHHHHcCCCCccceeEec
Q 024023 103 EKLKPDPVLRNLLLSM---PQRKIIFTNADQK---HAMEVLGRLGLEDCFEGIICF 152 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~---~~~~~l~~~gl~~~fd~i~~~ 152 (274)
...++.|++.++++.+ |++++++|+.+.. ....-|++.|...+ +.++-.
T Consensus 142 ~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~-~~LiLR 196 (275)
T TIGR01680 142 GEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW-EKLILK 196 (275)
T ss_pred ccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc-ceeeec
Confidence 4567888999988776 6899999998764 34456667787654 555554
No 160
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=97.73 E-value=9.4e-05 Score=74.74 Aligned_cols=151 Identities=12% Similarity=0.025 Sum_probs=96.8
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
++.|++.+.++.| |++++++|+.+...+..+.+.+|+..--+.++++++.... ...+.............
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l-------~~~el~~~i~~~~Vfar 651 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRL-------VYEEMDPILPKLRVLAR 651 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhC-------CHHHHHHHhccCeEEEE
Confidence 4457777776666 6999999999999999999999986432345555543211 00000000011112234
Q ss_pred CCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCcccccc--CHhHHHHHHHHHHhhcccc
Q 024023 183 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALN--SIHNIKEAIPEIWEGEGEQ 258 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~--~l~~l~~~l~~~~~~~~~~ 258 (274)
-.|+-...+.+.+.-....+.|+||+.||..+.+.|.++.++-..+.. +..+|.++. +|..+...+ ......-..
T Consensus 652 ~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i-~~gR~~~~n 730 (941)
T TIGR01517 652 SSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAV-KWGRNVYDN 730 (941)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHH-HHHHHHHHH
Confidence 445555666666655556799999999999999999999775424443 567888887 788888876 444444445
Q ss_pred hhhhcc
Q 024023 259 LEQVIQ 264 (274)
Q Consensus 259 ~~~~~~ 264 (274)
+.+.++
T Consensus 731 i~k~i~ 736 (941)
T TIGR01517 731 IRKFLQ 736 (941)
T ss_pred HHHHHH
Confidence 544444
No 161
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=97.71 E-value=0.0002 Score=69.23 Aligned_cols=107 Identities=13% Similarity=0.140 Sum_probs=73.1
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
++.|++.+.++.| |.+++++|+.....+....+.+|+.+++ +.. .
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~v~----a~~----------------------------~ 493 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDDFI----AEA----------------------------T 493 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCEEE----cCC----------------------------C
Confidence 3457777777766 6899999999999999999999996433 211 2
Q ss_pred CCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccc--cCHhHHHHH
Q 024023 183 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEA 247 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~--~~l~~l~~~ 247 (274)
|+-...+++.+.-....+.|+||+.||..+.+.++++.++- .+.. +..++.++ +++..+.+.
T Consensus 494 --PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~-~gt~~akeaadivLldd~~s~Iv~a 559 (675)
T TIGR01497 494 --PEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSDPTKLIEV 559 (675)
T ss_pred --HHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEECCCCHHHHHHH
Confidence 33334444444434467999999999999999999987764 4443 34445543 334444443
No 162
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=97.68 E-value=0.00011 Score=73.84 Aligned_cols=131 Identities=16% Similarity=0.186 Sum_probs=87.2
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCC
Q 024023 107 PDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 183 (274)
Q Consensus 107 ~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp 183 (274)
+.|++.+.++.| |++++++|+.+..-+..+.+.+|+. -+.++++.+.... +.-+-............-
T Consensus 551 ~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~--~~~v~~G~el~~l-------~~~el~~~~~~~~VfAr~ 621 (902)
T PRK10517 551 PKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLD--AGEVLIGSDIETL-------SDDELANLAERTTLFARL 621 (902)
T ss_pred chhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC--ccCceeHHHHHhC-------CHHHHHHHHhhCcEEEEc
Confidence 346777776666 6999999999999999999999995 2456666544321 000000001111122345
Q ss_pred CHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccc--cCHhHHHHH
Q 024023 184 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEA 247 (274)
Q Consensus 184 ~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~--~~l~~l~~~ 247 (274)
.|+-..++.+.+.-....+.|+||+.||..+.+.|.++.++- ++.. +..+|.++ +++..+.+.
T Consensus 622 sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~a 688 (902)
T PRK10517 622 TPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEG 688 (902)
T ss_pred CHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHH
Confidence 566667777776656677999999999999999999997765 5543 56677777 456666554
No 163
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=97.68 E-value=1.1e-05 Score=63.92 Aligned_cols=89 Identities=24% Similarity=0.248 Sum_probs=60.5
Q ss_pred CCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCC-CCccceeEecccCCCCCCCCCCCCcccccccCcccccCC
Q 024023 105 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGL-EDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 181 (274)
Q Consensus 105 ~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl-~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (274)
+.+.||+.++|+.+. +.++|.|.+....+..+++.+.- ..+|+.+++.++....
T Consensus 35 v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~ldp~~~~~~~~~~r~~~~~~----------------------- 91 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDALDPNGKLFSRRLYRDDCTFD----------------------- 91 (159)
T ss_dssp EEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHHHTTTTSSEEEEEEGGGSEEE-----------------------
T ss_pred EeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHhhhhhcccccccccccccccc-----------------------
Confidence 456799999999884 89999999999999999999987 4678998887754321
Q ss_pred CCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcC
Q 024023 182 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAG 219 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G 219 (274)
+.. . ..-++.+|.+.+++++|+|++.-...-...+
T Consensus 92 ~~~--~-~KdL~~l~~~~~~vvivDD~~~~~~~~~~N~ 126 (159)
T PF03031_consen 92 KGS--Y-IKDLSKLGRDLDNVVIVDDSPRKWALQPDNG 126 (159)
T ss_dssp TTE--E-E--GGGSSS-GGGEEEEES-GGGGTTSGGGE
T ss_pred ccc--c-ccchHHHhhccccEEEEeCCHHHeeccCCce
Confidence 100 0 1345555778899999999997553333333
No 164
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=97.67 E-value=0.00011 Score=73.72 Aligned_cols=133 Identities=13% Similarity=0.150 Sum_probs=88.5
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
++.|++.+.++.| |++++++|+.+..-+..+.+.+|+.. +.++++.+.... +.-+-............
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~~vi~G~el~~~-------~~~el~~~v~~~~VfAr 620 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--GEPLLGTEIEAM-------DDAALAREVEERTVFAK 620 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--CCccchHhhhhC-------CHHHHHHHhhhCCEEEE
Confidence 3457777777766 68999999999999999999999952 345555543211 00000000011112234
Q ss_pred CCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccc--cCHhHHHHHH
Q 024023 183 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAI 248 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~--~~l~~l~~~l 248 (274)
-.|+-..++.+.+.-....+.|+||+.||..+.+.|.++.++- +|.. +..+|.++ ++|..+...+
T Consensus 621 ~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~f~~Iv~ai 689 (903)
T PRK15122 621 LTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGV 689 (903)
T ss_pred eCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeC-cccHHHHHhcCEEEecCChHHHHHHH
Confidence 4566667777777666677999999999999999999997654 4443 66788877 5666666643
No 165
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.67 E-value=0.00024 Score=61.41 Aligned_cols=73 Identities=19% Similarity=0.227 Sum_probs=61.3
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHc----CCeEEEECCCCCCCCccccccCHhHHHHHHHHHHhhcc
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA----GLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEGEG 256 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~----G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~~~~~~~~ 256 (274)
+..|..++..+++.+|+..+++++|||+.||+.|.+.+ |.. +.+..+ ...|.+.+++..++..+|..+.....
T Consensus 172 g~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~-vavg~a--~~~A~~~l~~~~~v~~~L~~l~~~~~ 248 (266)
T PRK10187 172 GTNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGIS-VKVGTG--ATQASWRLAGVPDVWSWLEMITTAQQ 248 (266)
T ss_pred CCCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeE-EEECCC--CCcCeEeCCCHHHHHHHHHHHHHhhh
Confidence 46778999999999999999999999999999999988 544 555544 36688999999999999988886544
No 166
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=97.66 E-value=0.00029 Score=68.21 Aligned_cols=108 Identities=11% Similarity=0.174 Sum_probs=77.8
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
++.|++.+.++.| |++++++|+.+..-+..+.+.+|++++| + .
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~v~----A------------------------------~ 490 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFL----A------------------------------E 490 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcEEE----c------------------------------c
Confidence 3457888776666 6999999999999999999999996432 2 2
Q ss_pred CCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCcccccc--CHhHHHHHH
Q 024023 183 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALN--SIHNIKEAI 248 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~--~l~~l~~~l 248 (274)
-.|+-...+.+++.-...-+.|+||+.||..+.+.++++.++- +|.. +..+|.++- ++..+.+.+
T Consensus 491 ~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~~s~Iv~av 559 (679)
T PRK01122 491 ATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAGNMVDLDSNPTKLIEVV 559 (679)
T ss_pred CCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHH
Confidence 2344555666666555567999999999999999999997765 5554 445555542 455555543
No 167
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=97.66 E-value=0.00018 Score=72.07 Aligned_cols=131 Identities=11% Similarity=0.163 Sum_probs=84.7
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCC
Q 024023 107 PDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 183 (274)
Q Consensus 107 ~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp 183 (274)
+.|++.+.++.| |++++++|+.+...+..+.+.+|+.. +.++++.+.... .+. +.........+...-
T Consensus 516 ~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--~~v~~g~~l~~~------~~~-el~~~~~~~~vfAr~ 586 (867)
T TIGR01524 516 PKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--NDFLLGADIEEL------SDE-ELARELRKYHIFARL 586 (867)
T ss_pred CchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC--CCeeecHhhhhC------CHH-HHHHHhhhCeEEEEC
Confidence 457777776666 68999999999999999999999952 345554433210 000 000000111122334
Q ss_pred CHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccc--cCHhHHHHH
Q 024023 184 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEA 247 (274)
Q Consensus 184 ~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~--~~l~~l~~~ 247 (274)
.|+-..++.+.+.-....+.|+||+.||..+.+.|+++.++- .+.. +..+|.++ +++..+...
T Consensus 587 ~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~~~~I~~a 653 (867)
T TIGR01524 587 TPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLMVLEEG 653 (867)
T ss_pred CHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCChHHHHHH
Confidence 555566666666555577999999999999999999997765 4443 56677776 455555554
No 168
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=97.64 E-value=0.00017 Score=73.39 Aligned_cols=136 Identities=11% Similarity=0.038 Sum_probs=88.3
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCc----------cceeEecccCCCCCCCCCCCCcccccc
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDC----------FEGIICFETINPRLQPADNTDGIENNS 172 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~----------fd~i~~~~~~~~~~~~~~~~~~~~~~~ 172 (274)
++.|++.+.++.| |++++++|+....-+..+.+.+|+..- -+.++++.+.... +..+-..
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l-------~~~~l~~ 718 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDAL-------SDEEVDD 718 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhc-------CHHHHHH
Confidence 4457777776666 699999999999999999999998531 1235555443211 0000000
Q ss_pred cCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccccC--HhHHHHHH
Q 024023 173 FSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNS--IHNIKEAI 248 (274)
Q Consensus 173 ~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~~--l~~l~~~l 248 (274)
......+...-.|+-...+.+.+.-....+.++||+.||..+.+.++++.++-..+.. +..+|+++.+ |..+...+
T Consensus 719 ~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i 798 (1053)
T TIGR01523 719 LKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAI 798 (1053)
T ss_pred HhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHH
Confidence 0011112234456666666666655557799999999999999999999875434443 5678888854 77777654
No 169
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=97.59 E-value=6.9e-05 Score=61.83 Aligned_cols=43 Identities=19% Similarity=0.198 Sum_probs=40.7
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEE
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTV 223 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v 223 (274)
+.+|+.+++.++++++++++++++|||+.||+.|++.+|+..+
T Consensus 161 ~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~va 203 (204)
T TIGR01484 161 GVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVA 203 (204)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceE
Confidence 5889999999999999999999999999999999999998865
No 170
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.54 E-value=0.0027 Score=52.54 Aligned_cols=150 Identities=13% Similarity=0.151 Sum_probs=78.8
Q ss_pred CCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCC-Cc-------cceeEecccCC----CCCCCCCC-----
Q 024023 104 KLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLE-DC-------FEGIICFETIN----PRLQPADN----- 164 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~-~~-------fd~i~~~~~~~----~~~~~~~~----- 164 (274)
..++.||+.++++.++ +.-+|+|.+-.++++.....+|+. +. +|.+-..++.. ....|-+.
T Consensus 81 sa~lvPgA~etm~~l~~~~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~gee 160 (315)
T COG4030 81 SAKLVPGAEETMATLQERWTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEE 160 (315)
T ss_pred hcccCCChHHHHHHHhccCCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHH
Confidence 4688999999999996 467788888788888888887762 11 23211111000 00000000
Q ss_pred ----CCccc-------ccccCcccccC-CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHc-C---CeEEEECCC
Q 024023 165 ----TDGIE-------NNSFSSNQRIL-CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA-G---LHTVIVGSS 228 (274)
Q Consensus 165 ----~~~~~-------~~~~~~~~~~~-~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~-G---~~~v~v~~~ 228 (274)
.|.+| .+-++.+.-.. +-.+...++..++--+.+.+ +++||||.+|+.|.+.+ | .-.++.++.
T Consensus 161 lfe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~s-a~~VGDSItDv~ml~~~rgrGglAvaFNGNe 239 (315)
T COG4030 161 LFEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFS-AVVVGDSITDVKMLEAARGRGGLAVAFNGNE 239 (315)
T ss_pred HHHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcc-eeEecCcccchHHHHHhhccCceEEEecCCc
Confidence 11111 11122222111 22233444445555555555 89999999999998875 2 333333444
Q ss_pred CCCCCccccc--cCHhHHHHHHHHHHhh
Q 024023 229 VPVPPADHAL--NSIHNIKEAIPEIWEG 254 (274)
Q Consensus 229 ~~~~~a~~~~--~~l~~l~~~l~~~~~~ 254 (274)
+....|+..+ .+...+.++|.-.+.+
T Consensus 240 Yal~eAdVAvisp~~~a~~pvielf~e~ 267 (315)
T COG4030 240 YALKEADVAVISPTAMAEAPVIELFMER 267 (315)
T ss_pred ccccccceEEeccchhhhhHHHHHHHHH
Confidence 4455555544 3444455555544444
No 171
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=97.53 E-value=0.00026 Score=68.71 Aligned_cols=107 Identities=15% Similarity=0.288 Sum_probs=76.2
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
.+.|+..+.++.| |.+++++|+.++..++.+.+.+|+++++..+.
T Consensus 537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~v~Aell-------------------------------- 584 (713)
T COG2217 537 ELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDEVRAELL-------------------------------- 584 (713)
T ss_pred CCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHhheccCC--------------------------------
Confidence 3456777666555 68999999999999999999999965543322
Q ss_pred CCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccc--cCHhHHHHH
Q 024023 183 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEA 247 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~--~~l~~l~~~ 247 (274)
|+-..+..+++.-....+.||||+.||-.+...+.++.++-. |.. .+-+|.++ +++..+...
T Consensus 585 --PedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~-GtDvA~eaADvvL~~~dL~~v~~a 650 (713)
T COG2217 585 --PEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGS-GTDVAIEAADVVLMRDDLSAVPEA 650 (713)
T ss_pred --cHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecC-CcHHHHHhCCEEEecCCHHHHHHH
Confidence 233345555555444789999999999999999998877554 443 45566654 347776664
No 172
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=97.52 E-value=0.0032 Score=52.08 Aligned_cols=100 Identities=17% Similarity=0.206 Sum_probs=76.2
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCC---CCccceeEecccCCCCCCCCCCCCcccccccCccccc
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGL---EDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 179 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl---~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (274)
..++++...++.. +.+++|.|+++....+.+....+- ..+++..+-. .+|
T Consensus 123 ~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~~gdl~~y~~gyfDt-~iG----------------------- 178 (254)
T KOG2630|consen 123 HVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSDAGDLRKYISGYFDT-TIG----------------------- 178 (254)
T ss_pred cccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccCcchHHHHhhhhhhc-ccc-----------------------
Confidence 5678888888776 589999999998877766654432 2222222221 222
Q ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC
Q 024023 180 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP 230 (274)
Q Consensus 180 ~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~ 230 (274)
.|-....+..+.+..|.++.+.++.-|.+.-..+|+.+|+.+..+..+.+
T Consensus 179 -~K~e~~sy~~I~~~Ig~s~~eiLfLTd~~~Ea~aa~~aGl~a~l~~rPgn 228 (254)
T KOG2630|consen 179 -LKVESQSYKKIGHLIGKSPREILFLTDVPREAAAARKAGLQAGLVSRPGN 228 (254)
T ss_pred -ceehhHHHHHHHHHhCCChhheEEeccChHHHHHHHhcccceeeeecCCC
Confidence 27778899999999999999999999999999999999999988766554
No 173
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=97.47 E-value=0.00053 Score=54.43 Aligned_cols=76 Identities=20% Similarity=0.203 Sum_probs=48.9
Q ss_pred CCCcEEEEeCCChHHHHHH----HHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCH--HHHHHH
Q 024023 118 MPQRKIIFTNADQKHAMEV----LGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSL--EAIETA 191 (274)
Q Consensus 118 l~~~~~i~s~~~~~~~~~~----l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~--~~~~~~ 191 (274)
-|..++++|+.+..-+... .+.+.+....-.++.++ ||+| ...-.+
T Consensus 129 RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gd----------------------------k~k~~qy~Kt~~ 180 (237)
T COG3700 129 RGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGD----------------------------KPKPGQYTKTQW 180 (237)
T ss_pred cCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccC----------------------------CCCcccccccHH
Confidence 3688999999776544332 23344443333455555 4433 233455
Q ss_pred HHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEE
Q 024023 192 IRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 225 (274)
Q Consensus 192 l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v 225 (274)
+++-++ -++.|||.+||.+|+++|+.-+-+
T Consensus 181 i~~~~~----~IhYGDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 181 IQDKNI----RIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred HHhcCc----eEEecCCchhhhHHHhcCccceeE
Confidence 655554 479999999999999999977654
No 174
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=97.44 E-value=0.00059 Score=67.42 Aligned_cols=137 Identities=15% Similarity=0.095 Sum_probs=83.3
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
++.|++.+.++.| |++++++|+.+...+..+.+.+|+.+ .++++++.....+- +.++..+-.....+......
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~---~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~vfAr 517 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGT---NIYTADVLLKGDNR-DDLPSGELGEMVEDADGFAE 517 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC---CCcCHHHhcCCcch-hhCCHHHHHHHHHhCCEEEe
Confidence 4457777776666 69999999999999999999999963 23333322111000 00000000000000112234
Q ss_pred CCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccc--cCHhHHHHH
Q 024023 183 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEA 247 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~--~~l~~l~~~ 247 (274)
-.|+-...+.+.+.-....+.|+||+.||..+.+.+.++.++- ++.. +..+|.++ +++..+...
T Consensus 518 ~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~-~gtdvAkeaADivLl~d~l~~I~~a 585 (755)
T TIGR01647 518 VFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVA-GATDAARSAADIVLTEPGLSVIVDA 585 (755)
T ss_pred cCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHHhCCEEEEcCChHHHHHH
Confidence 4566666677766666678999999999999999999997754 4443 45566665 345555543
No 175
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=97.41 E-value=0.00031 Score=55.63 Aligned_cols=85 Identities=18% Similarity=0.219 Sum_probs=64.0
Q ss_pred CCCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCC-Ccc-ceeEecccCCCCCCCCCCCCcccccccCccccc
Q 024023 104 KLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLE-DCF-EGIICFETINPRLQPADNTDGIENNSFSSNQRI 179 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~-~~f-d~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (274)
.+.+.||+.++|+.++ +.++|+|++.+..+..+++.++.. .+| +.+++.++....
T Consensus 56 ~v~~rPgv~efL~~l~~~yel~I~T~~~~~yA~~vl~~ldp~~~~F~~ri~~rd~~~~~--------------------- 114 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKLYEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRIISRDESGSP--------------------- 114 (156)
T ss_pred EEEECCCHHHHHHHHHhhcEEEEEeCCcHHHHHHHHHHhCcCCCeeccEEEEeccCCCC---------------------
Confidence 4578899999999994 789999999999999999999988 488 667777653311
Q ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHH
Q 024023 180 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAK 216 (274)
Q Consensus 180 ~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~ 216 (274)
..| .+-.-+|.+.+.+++|+|++.-...-.
T Consensus 115 ~~K-------dL~~i~~~d~~~vvivDd~~~~~~~~~ 144 (156)
T TIGR02250 115 HTK-------SLLRLFPADESMVVIIDDREDVWPWHK 144 (156)
T ss_pred ccc-------cHHHHcCCCcccEEEEeCCHHHhhcCc
Confidence 012 121335788899999999996554433
No 176
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=97.41 E-value=0.00047 Score=69.47 Aligned_cols=118 Identities=12% Similarity=0.132 Sum_probs=81.3
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCcc--ceeEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCF--EGIICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~f--d~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
+|.++++++++.| |++++++||....-+..+.+.+|+..-- +.++++.+..... ..++.+..... ...
T Consensus 547 ppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~-~~el~~~~~~~------~Vf 619 (917)
T COG0474 547 PPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALS-DEELAELVEEL------SVF 619 (917)
T ss_pred CCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcC-HHHHHHHhhhC------cEE
Confidence 4567777776666 7999999999999999999999987544 3366666543210 00111111111 133
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP 230 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~ 230 (274)
.+-.|+-..++.+.+.-...-+.+.||+.||..|.+.|.++..+...|.+
T Consensus 620 ARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtd 669 (917)
T COG0474 620 ARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTD 669 (917)
T ss_pred EEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHHH
Confidence 45556666666666666667899999999999999999999887776665
No 177
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=97.31 E-value=0.00082 Score=64.97 Aligned_cols=136 Identities=13% Similarity=0.120 Sum_probs=88.0
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccc----eeEecccCCCCCCCCCCCCcccccccCcccc
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFE----GIICFETINPRLQPADNTDGIENNSFSSNQR 178 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd----~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (274)
+|.|++.+.++.+ |+++..+|+....-+..+.+++|+...-+ ..+++.++... +..+.........
T Consensus 584 PPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~l-------s~~~~~~~~~~~~ 656 (972)
T KOG0202|consen 584 PPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDL-------SDEELDDAVRRVL 656 (972)
T ss_pred CCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcC-------CHHHHHHHhhcce
Confidence 4567777766665 79999999999999999999999865544 34555543321 1111111122222
Q ss_pred cCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccc--cCHhHHHHHH
Q 024023 179 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAI 248 (274)
Q Consensus 179 ~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~--~~l~~l~~~l 248 (274)
+...-.|....++.+.+.-..+=+.|-||+.||-.+.+.+.++.++--+|.. +..+|.++ ++|..+..++
T Consensus 657 vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAV 730 (972)
T KOG0202|consen 657 VFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVAAV 730 (972)
T ss_pred EEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHHHH
Confidence 2223344455556666655557788999999999999999999887656664 55566655 3455555443
No 178
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=97.28 E-value=0.0017 Score=66.05 Aligned_cols=136 Identities=10% Similarity=0.055 Sum_probs=85.0
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCcc------------------------ceeEecccCCCC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCF------------------------EGIICFETINPR 158 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~f------------------------d~i~~~~~~~~~ 158 (274)
++.|++.+.++.+ |++++++|+.+...+....+.+|+..-- ..++++.+....
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l 647 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDM 647 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhC
Confidence 3457787777766 6999999999999999999999984210 023333322210
Q ss_pred CCCCCCCCcccccccCc-ccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCcc
Q 024023 159 LQPADNTDGIENNSFSS-NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPAD 235 (274)
Q Consensus 159 ~~~~~~~~~~~~~~~~~-~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~ 235 (274)
.+.-......+ .......-.|+-..++.+.+.-....+.++||+.||..|.+.+.++.++-..|.. +..+|
T Consensus 648 ------~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aAD 721 (997)
T TIGR01106 648 ------TSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAAD 721 (997)
T ss_pred ------CHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhc
Confidence 00000000000 0012334455555566655555556789999999999999999999876444443 56678
Q ss_pred ccccC--HhHHHHH
Q 024023 236 HALNS--IHNIKEA 247 (274)
Q Consensus 236 ~~~~~--l~~l~~~ 247 (274)
+++.+ |..+...
T Consensus 722 ivL~dd~f~~Iv~a 735 (997)
T TIGR01106 722 MILLDDNFASIVTG 735 (997)
T ss_pred eEEecCCHHHHHHH
Confidence 88776 7777765
No 179
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=97.25 E-value=0.0024 Score=50.26 Aligned_cols=44 Identities=34% Similarity=0.552 Sum_probs=33.8
Q ss_pred HHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCCCCCCcccc
Q 024023 190 TAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVPVPPADHA 237 (274)
Q Consensus 190 ~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~~~~~a~~~ 237 (274)
.+.+..+++ +++.|+. |-.+.|+++|++.+.+++.+++.+++-.
T Consensus 128 ~~vrth~id----lf~ed~~~na~~iAk~~~~~vilins~ynRkp~~~n 172 (194)
T COG5663 128 EAVRTHNID----LFFEDSHDNAGQIAKNAGIPVILINSPYNRKPAAKN 172 (194)
T ss_pred hhhHhhccC----ccccccCchHHHHHHhcCCcEEEecCcccccchHHH
Confidence 445555664 5888998 7789999999999999999986665443
No 180
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=97.14 E-value=0.012 Score=54.62 Aligned_cols=97 Identities=9% Similarity=0.021 Sum_probs=58.3
Q ss_pred ChhHHHHHHhCCCcEEEEeCCChHHHHHHHHH-cCCCCccceeEeccc-CCCCCCCCCCCCcccccccCcccccCCCCCH
Q 024023 108 DPVLRNLLLSMPQRKIIFTNADQKHAMEVLGR-LGLEDCFEGIICFET-INPRLQPADNTDGIENNSFSSNQRILCKPSL 185 (274)
Q Consensus 108 ~~~~~~~L~~l~~~~~i~s~~~~~~~~~~l~~-~gl~~~fd~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~ 185 (274)
.+...+..+..+ +.+++|..++-+++.+++. +|. |.|++.+= +. +.=+.+|.+.+.++ .
T Consensus 98 ~~e~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~----D~VvGTEL~v~---------~~G~~TG~~~G~n~-----~ 158 (498)
T PLN02499 98 DMEAWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRA----DEVIGSELVVN---------RFGFATGFIRGTDV-----D 158 (498)
T ss_pred CHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCC----ceEEeeeEEEe---------eccEEEEEEecCcc-----H
Confidence 355667777766 9999999999999999998 666 55555441 10 00113444443222 3
Q ss_pred HH-HHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEEC
Q 024023 186 EA-IETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG 226 (274)
Q Consensus 186 ~~-~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~ 226 (274)
+. ...+.+.+|- ....+-+||+..|-.-..- |+-+.+.
T Consensus 159 ek~~~rl~~~~g~-~~~~vg~~~~~~~~~f~~~--ck~~~~~ 197 (498)
T PLN02499 159 QSVANRVANLFVD-ERPQLGLGRISASSSFLSL--CKEQIHP 197 (498)
T ss_pred HHHHHHHHHHhCc-cCceecccCCcccchhhhh--CceEEec
Confidence 33 4445555663 2447888998877665543 4445443
No 181
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=96.98 E-value=0.0076 Score=49.42 Aligned_cols=129 Identities=17% Similarity=0.190 Sum_probs=70.4
Q ss_pred CChhHHHHHHhC--CCcEEEEeCCChHHHHHHHHHcCCCCc--cceeEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 107 PDPVLRNLLLSM--PQRKIIFTNADQKHAMEVLGRLGLEDC--FEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 107 ~~~~~~~~L~~l--~~~~~i~s~~~~~~~~~~l~~~gl~~~--fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
.-|++.++|+.+ .+.++|.|.+....+..++..+++... +...+.-+..... .....+......|
T Consensus 46 kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~l~~~~~~~~~i~~~ld~~~~~-----------~~~~~~~g~~~vK 114 (195)
T TIGR02245 46 MRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTELGVLTNPNYKITFLLDSTAMI-----------TVHTPRRGKFDVK 114 (195)
T ss_pred eCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHHhcccCCccceEEEEeccccce-----------eeEeeccCcEEEe
Confidence 458899999998 488999999999999999999876432 1112222211000 0000001111124
Q ss_pred CCHHHHHHHHHHhCC--CCCeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCCccccccCHhHHHHHHHHHHh
Q 024023 183 PSLEAIETAIRIANV--DPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWE 253 (274)
Q Consensus 183 p~~~~~~~~l~~~g~--~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~~~~~ 253 (274)
+ +..+-.++|. +.+++++|+|++.-..+--..|+..--.... ...+.-=..+.+|.++|+.+..
T Consensus 115 d----L~~lw~~l~~~~~~~ntiiVDd~p~~~~~~P~N~i~I~~f~~~---~~~~~~D~eL~~L~~yL~~la~ 180 (195)
T TIGR02245 115 P----LGVIWALLPEFYSMKNTIMFDDLRRNFLMNPQNGLKIRPFKKA---HANRGTDQELLKLTQYLKTIAE 180 (195)
T ss_pred e----cHHhhhhcccCCCcccEEEEeCCHHHHhcCCCCccccCCcccc---CCCCcccHHHHHHHHHHHHHhc
Confidence 3 2223235543 7789999999997654443445543211111 1011112236677777777765
No 182
>PLN02645 phosphoglycolate phosphatase
Probab=96.98 E-value=0.0059 Score=53.97 Aligned_cols=86 Identities=15% Similarity=0.117 Sum_probs=62.9
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCC---hHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 107 PDPVLRNLLLSM---PQRKIIFTNAD---QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 107 ~~~~~~~~L~~l---~~~~~i~s~~~---~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
++||+.++|+.| |.+++++||.+ .......++.+|+...++.|+++.
T Consensus 45 ~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~ts~--------------------------- 97 (311)
T PLN02645 45 LIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFSSS--------------------------- 97 (311)
T ss_pred cCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEeehH---------------------------
Confidence 456777766655 68999999987 445555668889877777777764
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEE
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVI 224 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~ 224 (274)
......++..+....+.++|+++..+.+.++++|+.++.
T Consensus 98 -----~~~~~~l~~~~~~~~~~V~viG~~~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 98 -----FAAAAYLKSINFPKDKKVYVIGEEGILEELELAGFQYLG 136 (311)
T ss_pred -----HHHHHHHHhhccCCCCEEEEEcCHHHHHHHHHCCCEEec
Confidence 245566666666545568888888999999999998654
No 183
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=96.83 E-value=0.0061 Score=46.35 Aligned_cols=45 Identities=11% Similarity=0.118 Sum_probs=27.6
Q ss_pred CChhHHHHHH---hCCCcEEEEeCCChH---------------HHHHHHHHcCCCCccceeEecc
Q 024023 107 PDPVLRNLLL---SMPQRKIIFTNADQK---------------HAMEVLGRLGLEDCFEGIICFE 153 (274)
Q Consensus 107 ~~~~~~~~L~---~l~~~~~i~s~~~~~---------------~~~~~l~~~gl~~~fd~i~~~~ 153 (274)
+.+++.+.|+ ..|..++++|+.+.. .+...|++.++. +|.++.+-
T Consensus 25 ~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ip--Yd~l~~~k 87 (126)
T TIGR01689 25 PILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNVP--YDEIYVGK 87 (126)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCCC--CceEEeCC
Confidence 3344555554 346778888887654 445677777776 57766543
No 184
>PTZ00174 phosphomannomutase; Provisional
Probab=96.83 E-value=0.0011 Score=56.48 Aligned_cols=43 Identities=12% Similarity=-0.030 Sum_probs=36.2
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcC----ChhcHHHHHHcCCeEEEECC
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDD----SARNIASAKAAGLHTVIVGS 227 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGD----s~~Di~~a~~~G~~~v~v~~ 227 (274)
+-.|..+++.++++ ++++++||| +.||++|.+.++.....+.+
T Consensus 186 gvsKg~al~~L~~~----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n 232 (247)
T PTZ00174 186 GWDKTYCLRHLEND----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKN 232 (247)
T ss_pred CCcHHHHHHHHHhh----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCC
Confidence 57789999999988 599999999 89999999987776566653
No 185
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=96.79 E-value=0.0011 Score=67.85 Aligned_cols=50 Identities=16% Similarity=0.234 Sum_probs=39.3
Q ss_pred CCeEEEEcCChhcHHHHHHcCCeEEEECCCC---CCCCccccccCHhHHHHHHH
Q 024023 199 PKKTIFFDDSARNIASAKAAGLHTVIVGSSV---PVPPADHALNSIHNIKEAIP 249 (274)
Q Consensus 199 ~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~---~~~~a~~~~~~l~~l~~~l~ 249 (274)
...+.++|||.||+.|.+.|.++. ++...+ ....+|+++.++..|...|-
T Consensus 768 ~~~vl~iGDG~ND~~mlk~AdVGI-gi~g~eg~qA~~aaD~~i~~F~~L~~lll 820 (1057)
T TIGR01652 768 GKTTLAIGDGANDVSMIQEADVGV-GISGKEGMQAVMASDFAIGQFRFLTKLLL 820 (1057)
T ss_pred CCeEEEEeCCCccHHHHhhcCeee-EecChHHHHHHHhhhhhhhhHHHHHHHHH
Confidence 467999999999999999999886 343222 24579999999888888763
No 186
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=96.78 E-value=0.0039 Score=61.48 Aligned_cols=70 Identities=11% Similarity=0.034 Sum_probs=55.2
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCCccccccCHhHHHHHHHHHH
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIW 252 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~~~~ 252 (274)
+..|..+++.+++ +.+++.++++||+.||+.|.+.++.....+..|.....|.+++++-+++..+|+.+.
T Consensus 655 ~vnKG~al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~~s~A~~~l~~~~eV~~~L~~l~ 724 (726)
T PRK14501 655 GVNKGRAVRRLLE--AGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPGESRARYRLPSQREVRELLRRLL 724 (726)
T ss_pred CCCHHHHHHHHHh--cCCCCEEEEECCCCChHHHHHhcccCceEEEECCCCCcceEeCCCHHHHHHHHHHHh
Confidence 4667889999998 788899999999999999999874222223333346789999999999988888765
No 187
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=96.63 E-value=0.019 Score=49.19 Aligned_cols=97 Identities=19% Similarity=0.160 Sum_probs=59.9
Q ss_pred HHhCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCC-CCC----Ccccccc--cCcccccCCCC-CHH
Q 024023 115 LLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPA-DNT----DGIENNS--FSSNQRILCKP-SLE 186 (274)
Q Consensus 115 L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~-~~~----~~~~~~~--~~~~~~~~~kp-~~~ 186 (274)
|+..+.-+++=|.|+.+++...++.+++.++||.+++....... .+. ... +-++... +..-....+-| +|.
T Consensus 154 Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~~G~~~~~-~~~~~~~d~~~~~~f~~~~FylDv~~~~~LPKSPr 232 (297)
T PF05152_consen 154 LKEQGCVLVLWSYGNREHVRHSLKELKLEGYFDIIICGGNKAGE-YNSRVIVDRQYKVIFVSKPFYLDVTNVNNLPKSPR 232 (297)
T ss_pred HHHcCCEEEEecCCCHHHHHHHHHHhCCccccEEEEeCCccCCc-CCccceeecccceEEeccceEEeCCcCCCCCCCCe
Confidence 33445667888999999999999999999999999987633211 011 111 1122111 11111111123 367
Q ss_pred HHHHHHHHhCCCCC-eEEEEcCCh-hcH
Q 024023 187 AIETAIRIANVDPK-KTIFFDDSA-RNI 212 (274)
Q Consensus 187 ~~~~~l~~~g~~~~-~~i~VGDs~-~Di 212 (274)
.+...|++.|+..- .+-.|+|=. ||+
T Consensus 233 VVL~yL~k~gvny~KtiTLVDDL~~Nn~ 260 (297)
T PF05152_consen 233 VVLWYLRKKGVNYFKTITLVDDLKSNNY 260 (297)
T ss_pred ehHHHHHHcCCceeeeEEEeccCcccCc
Confidence 88899999999764 455788877 564
No 188
>PLN02580 trehalose-phosphatase
Probab=96.60 E-value=0.0097 Score=53.80 Aligned_cols=71 Identities=15% Similarity=0.142 Sum_probs=57.2
Q ss_pred CCCHHHHHHHHHHhCCCCCe---EEEEcCChhcHHHHHH-----cCCeEEEECCCCCCCCccccccCHhHHHHHHHHHHh
Q 024023 182 KPSLEAIETAIRIANVDPKK---TIFFDDSARNIASAKA-----AGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWE 253 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~---~i~VGDs~~Di~~a~~-----~G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~~~~~ 253 (274)
-.|..+++.+++.+|+...+ .++|||..||..|.+. .|+. |.+..+...-.|.|.+.+..++.++|..+..
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~-I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~~ 378 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYG-ILVSSVPKESNAFYSLRDPSEVMEFLKSLVT 378 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceE-EEEecCCCCccceEEcCCHHHHHHHHHHHHH
Confidence 56788999999999987663 3899999999999986 3654 4455555566789999999999999887754
No 189
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.58 E-value=0.011 Score=54.12 Aligned_cols=82 Identities=18% Similarity=0.111 Sum_probs=59.9
Q ss_pred HHhCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHH
Q 024023 115 LLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRI 194 (274)
Q Consensus 115 L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~ 194 (274)
|..-|+-++|.|-.....+.....+. -|.++.-+++.. +...| -||.+.++.++++
T Consensus 267 l~kqGVlLav~SKN~~~da~evF~kh-----p~MiLkeedfa~-------~~iNW------------~~K~eNirkIAkk 322 (574)
T COG3882 267 LKKQGVLLAVCSKNTEKDAKEVFRKH-----PDMILKEEDFAV-------FQINW------------DPKAENIRKIAKK 322 (574)
T ss_pred HHhccEEEEEecCCchhhHHHHHhhC-----CCeEeeHhhhhh-------heecC------------CcchhhHHHHHHH
Confidence 33445667788888888888777664 244544443321 12222 8999999999999
Q ss_pred hCCCCCeEEEEcCChhcHHHHHHcCC
Q 024023 195 ANVDPKKTIFFDDSARNIASAKAAGL 220 (274)
Q Consensus 195 ~g~~~~~~i~VGDs~~Di~~a~~~G~ 220 (274)
+++..+-.+|++|++...+-.+..+-
T Consensus 323 lNlg~dSmvFiDD~p~ErE~vk~~~~ 348 (574)
T COG3882 323 LNLGLDSMVFIDDNPAERELVKRELP 348 (574)
T ss_pred hCCCccceEEecCCHHHHHHHHhcCc
Confidence 99999999999999988888887763
No 190
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=96.52 E-value=0.013 Score=57.56 Aligned_cols=102 Identities=17% Similarity=0.190 Sum_probs=67.6
Q ss_pred HHHHHHhCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHH
Q 024023 111 LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIET 190 (274)
Q Consensus 111 ~~~~L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~ 190 (274)
+...|+.+|.+++++|+.....++...+.+| ++.|++-- +|. -...
T Consensus 731 av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VG----i~~V~aev----------------------------~P~--~K~~ 776 (951)
T KOG0207|consen 731 AVAELKSMGIKVVMLTGDNDAAARSVAQQVG----IDNVYAEV----------------------------LPE--QKAE 776 (951)
T ss_pred HHHHHHhcCceEEEEcCCCHHHHHHHHHhhC----cceEEecc----------------------------Cch--hhHH
Confidence 4445666789999999999999999999998 45666532 322 2233
Q ss_pred HHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC-CCCccccc--cCHhHHHH
Q 024023 191 AIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHAL--NSIHNIKE 246 (274)
Q Consensus 191 ~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~-~~~a~~~~--~~l~~l~~ 246 (274)
..+++.-....+.||||+.||-.+...+.++.+....+.- .+.+|.++ +++.++..
T Consensus 777 ~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~ 835 (951)
T KOG0207|consen 777 KIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPF 835 (951)
T ss_pred HHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHH
Confidence 4444443446799999999999988888888665433222 34445443 44555444
No 191
>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=96.45 E-value=0.0064 Score=55.20 Aligned_cols=112 Identities=21% Similarity=0.240 Sum_probs=83.7
Q ss_pred HHHHHHhccCCCCCCCCChhHH--HHHHhC---CCcEEEEeCC--ChHHHHHHHHHcCCCCccceeEecccCCCCCCCCC
Q 024023 91 EFHAFVHGKLPYEKLKPDPVLR--NLLLSM---PQRKIIFTNA--DQKHAMEVLGRLGLEDCFEGIICFETINPRLQPAD 163 (274)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~--~~L~~l---~~~~~i~s~~--~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~ 163 (274)
.+.+...-....++..++|..+ ++.+.+ +.+++++|.. +.+..+.+|.+.|.+..--.++.+.+....
T Consensus 82 ~f~~~~~lEI~tEKevLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~d~~nipiY~S~e~rl~----- 156 (635)
T COG5610 82 SFQELMKLEINTEKEVLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGPDFNNIPIYMSSEFRLK----- 156 (635)
T ss_pred HHHHHhceeeccceeEeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCCCccCceeeecceeehh-----
Confidence 3444443333344555555443 555555 4789999985 567888899999887554456777766654
Q ss_pred CCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHHHcCCeEEEE
Q 024023 164 NTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIV 225 (274)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v 225 (274)
|.+...+..++...++++...+.+||+. .|+.++++.|+.+...
T Consensus 157 ------------------KnSg~LFk~Vlk~EnVd~~~w~H~GDN~~aD~l~pk~LgI~Tlf~ 201 (635)
T COG5610 157 ------------------KNSGNLFKAVLKLENVDPKKWIHCGDNWVADYLKPKNLGISTLFY 201 (635)
T ss_pred ------------------cccchHHHHHHhhcCCChhheEEecCchhhhhcCccccchhHHHH
Confidence 8889999999999999999999999999 7999999999988643
No 192
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=96.32 E-value=0.04 Score=56.67 Aligned_cols=142 Identities=15% Similarity=0.171 Sum_probs=80.5
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccC---------------CC-------CCCC
Q 024023 107 PDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETI---------------NP-------RLQP 161 (274)
Q Consensus 107 ~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~---------------~~-------~~~~ 161 (274)
+.|++.+.++.| |++++++||.+..-+..+.+.+|+-.--+.++..+.. .. ..+|
T Consensus 657 lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (1054)
T TIGR01657 657 LKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIP 736 (1054)
T ss_pred CCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCcccccccccccc
Confidence 456777666665 6999999999999999999999984322222221100 00 0000
Q ss_pred CCC----CCccc--------cc---------------ccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHH
Q 024023 162 ADN----TDGIE--------NN---------------SFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIAS 214 (274)
Q Consensus 162 ~~~----~~~~~--------~~---------------~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~ 214 (274)
... .+... .+ ....+..+...-.|+-...+.+.+.-...-+.|+|||.||..+
T Consensus 737 ~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~A 816 (1054)
T TIGR01657 737 YPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGA 816 (1054)
T ss_pred CcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHH
Confidence 000 00000 00 0001111223444555555555555445679999999999999
Q ss_pred HHHcCCeEEEECCCCCCCCcccc--ccCHhHHHHHHH
Q 024023 215 AKAAGLHTVIVGSSVPVPPADHA--LNSIHNIKEAIP 249 (274)
Q Consensus 215 a~~~G~~~v~v~~~~~~~~a~~~--~~~l~~l~~~l~ 249 (274)
.+.|.++.++... +....++++ -+++..+..+++
T Consensus 817 LK~AdVGIam~~~-das~AA~f~l~~~~~~~I~~~I~ 852 (1054)
T TIGR01657 817 LKQADVGISLSEA-EASVAAPFTSKLASISCVPNVIR 852 (1054)
T ss_pred HHhcCcceeeccc-cceeecccccCCCcHHHHHHHHH
Confidence 9999998876543 222445555 346666666554
No 193
>PLN03190 aminophospholipid translocase; Provisional
Probab=96.27 E-value=0.004 Score=64.23 Aligned_cols=63 Identities=13% Similarity=0.121 Sum_probs=47.4
Q ss_pred CeEEEEcCChhcHHHHHHcCCeEEEECCCC---CCCCccccccCHhHHHHHHHHHHhhcccchhhhc
Q 024023 200 KKTIFFDDSARNIASAKAAGLHTVIVGSSV---PVPPADHALNSIHNIKEAIPEIWEGEGEQLEQVI 263 (274)
Q Consensus 200 ~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~---~~~~a~~~~~~l~~l~~~l~~~~~~~~~~~~~~~ 263 (274)
.-+++||||.||+.|.+.|.++. ++...+ ....+|+.+..|..|..+|-..-..+-.+++..+
T Consensus 872 ~vtlaIGDGaNDv~mIq~AdVGI-GIsG~EG~qA~~aSDfaI~~Fr~L~rLLlvHGr~~y~R~s~~i 937 (1178)
T PLN03190 872 DMTLAIGDGANDVSMIQMADVGV-GISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMI 937 (1178)
T ss_pred cEEEEECCCcchHHHHHhcCeee-eecCchhHHHHHhhccchhhhHHHHHHHHHhCHHHHHHHHHHH
Confidence 45899999999999999998876 443333 1567999999999999987766555555544443
No 194
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=96.11 E-value=0.033 Score=52.58 Aligned_cols=94 Identities=14% Similarity=0.149 Sum_probs=66.4
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
++.|++.+.++.| +.+++++|+.....+....+.+|+ ++ .
T Consensus 347 ~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi-------~~------------------------------~ 389 (499)
T TIGR01494 347 PLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI-------FA------------------------------R 389 (499)
T ss_pred CCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc-------ee------------------------------c
Confidence 4456666666655 688999999999999999999986 11 1
Q ss_pred CCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCCccccccC
Q 024023 183 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNS 240 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~a~~~~~~ 240 (274)
-.|+-...+.+++.-....+.+|||+.||..+.+.++++.++. ....+|.++.+
T Consensus 390 ~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~----a~~~adivl~~ 443 (499)
T TIGR01494 390 VTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG----AKAAADIVLLD 443 (499)
T ss_pred cCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCccccc----hHHhCCeEEec
Confidence 2244444555554444477999999999999999999875543 34456777664
No 195
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=96.09 E-value=0.017 Score=57.81 Aligned_cols=75 Identities=8% Similarity=-0.019 Sum_probs=58.2
Q ss_pred CCCCHHHHHHHHHH---hCCCCCeEEEEcCChhcHHHHHHcCCe-----------EEEECCCCCCCCccccccCHhHHHH
Q 024023 181 CKPSLEAIETAIRI---ANVDPKKTIFFDDSARNIASAKAAGLH-----------TVIVGSSVPVPPADHALNSIHNIKE 246 (274)
Q Consensus 181 ~kp~~~~~~~~l~~---~g~~~~~~i~VGDs~~Di~~a~~~G~~-----------~v~v~~~~~~~~a~~~~~~l~~l~~ 246 (274)
+..|..+++.+++. +|..++.+++|||+.||..|.+.++-. .+.|.-|.....|.|.+++..++.+
T Consensus 760 gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~~~S~A~y~L~d~~eV~~ 839 (854)
T PLN02205 760 GVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQKPSKAKYYLDDTAEIVR 839 (854)
T ss_pred CCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEECCCCccCeEecCCHHHHHH
Confidence 46778899988754 688999999999999999999987621 1223334445778899999999999
Q ss_pred HHHHHHhhc
Q 024023 247 AIPEIWEGE 255 (274)
Q Consensus 247 ~l~~~~~~~ 255 (274)
.|+.+.+..
T Consensus 840 lL~~L~~~~ 848 (854)
T PLN02205 840 LMQGLASVS 848 (854)
T ss_pred HHHHHHhcc
Confidence 998887543
No 196
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=96.07 E-value=0.095 Score=47.12 Aligned_cols=114 Identities=18% Similarity=0.151 Sum_probs=72.6
Q ss_pred hhHHHHHHhCCCcEEEEeCCChHHHHHHHHH---cCCCCccceeEecccCCCCCCCCCCCCcc-----------cccc-c
Q 024023 109 PVLRNLLLSMPQRKIIFTNADQKHAMEVLGR---LGLEDCFEGIICFETINPRLQPADNTDGI-----------ENNS-F 173 (274)
Q Consensus 109 ~~~~~~L~~l~~~~~i~s~~~~~~~~~~l~~---~gl~~~fd~i~~~~~~~~~~~~~~~~~~~-----------~~~~-~ 173 (274)
|-....++..|.++.++||............ .++..+||.+++.-.- |-=|..+. ...+ .
T Consensus 204 v~~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~K-----p~ff~e~~vlreV~t~~g~l~~g~~ 278 (424)
T KOG2469|consen 204 VPLLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAK-----PGFFHEGTVLREVEPQEGLLKNGDN 278 (424)
T ss_pred ccchHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccC-----Cccccccceeeeecccccccccccc
Confidence 3466667777889999999887766655543 2577889887665311 00011111 0111 1
Q ss_pred CcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChh-cH-HHHHHcCCeEEEECC
Q 024023 174 SSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSAR-NI-ASAKAAGLHTVIVGS 227 (274)
Q Consensus 174 ~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~-Di-~~a~~~G~~~v~v~~ 227 (274)
..-....+++++.....+.+.+++...+++++||+.. |+ ..-+.-|+.++.+..
T Consensus 279 ~~p~e~~~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~p 334 (424)
T KOG2469|consen 279 TGPLEQGGVYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAP 334 (424)
T ss_pred CCcchhcccCCcchHHHHHHHhcccccceeecccceeeeEEecceecceEEEEEeh
Confidence 1112334566777888899999999999999999994 64 444567888887743
No 197
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=95.65 E-value=0.083 Score=38.48 Aligned_cols=81 Identities=19% Similarity=0.187 Sum_probs=52.3
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCCh---HHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCccccc
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQ---KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 179 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~---~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (274)
.++||+.++++.| +.+++++||++. ......|+.+|+.---+.|+++-.
T Consensus 14 ~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ts~~------------------------- 68 (101)
T PF13344_consen 14 EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIITSGM------------------------- 68 (101)
T ss_dssp EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEEHHH-------------------------
T ss_pred CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEEChHH-------------------------
Confidence 5678888888777 688999999753 456667788898855577777642
Q ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCC
Q 024023 180 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGL 220 (274)
Q Consensus 180 ~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~ 220 (274)
.....+++. ....+++++|-. ...+.++++|+
T Consensus 69 -------~~~~~l~~~-~~~~~v~vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 69 -------AAAEYLKEH-KGGKKVYVLGSD-GLREELREAGF 100 (101)
T ss_dssp -------HHHHHHHHH-TTSSEEEEES-H-HHHHHHHHTTE
T ss_pred -------HHHHHHHhc-CCCCEEEEEcCH-HHHHHHHHcCC
Confidence 444555552 335678888765 44556666664
No 198
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=95.44 E-value=0.1 Score=43.93 Aligned_cols=78 Identities=12% Similarity=0.069 Sum_probs=57.8
Q ss_pred EEEeCCChHHHHHHHHHcCCCCcc--ceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCC
Q 024023 123 IIFTNADQKHAMEVLGRLGLEDCF--EGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPK 200 (274)
Q Consensus 123 ~i~s~~~~~~~~~~l~~~gl~~~f--d~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~ 200 (274)
+++|++.---...+.=-+|+.++| +.|+++-.+ .|.+.|+.+.+++|-+..
T Consensus 179 vLVTs~qLVPaLaKcLLy~L~~~f~ieNIYSa~kv---------------------------GK~~cFe~I~~Rfg~p~~ 231 (274)
T TIGR01658 179 VLVTSGQLIPSLAKCLLFRLDTIFRIENVYSSIKV---------------------------GKLQCFKWIKERFGHPKV 231 (274)
T ss_pred EEEEcCccHHHHHHHHHhccCCccccccccchhhc---------------------------chHHHHHHHHHHhCCCCc
Confidence 466665432222233334666665 557877653 447899999999999788
Q ss_pred eEEEEcCChhcHHHHHHcCCeEEEECC
Q 024023 201 KTIFFDDSARNIASAKAAGLHTVIVGS 227 (274)
Q Consensus 201 ~~i~VGDs~~Di~~a~~~G~~~v~v~~ 227 (274)
..++|||+..--.+|+..+++++-+..
T Consensus 232 ~f~~IGDG~eEe~aAk~l~wPFw~I~~ 258 (274)
T TIGR01658 232 RFCAIGDGWEECTAAQAMNWPFVKIDL 258 (274)
T ss_pred eEEEeCCChhHHHHHHhcCCCeEEeec
Confidence 999999999999999999999987755
No 199
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=95.21 E-value=0.17 Score=48.74 Aligned_cols=77 Identities=12% Similarity=0.139 Sum_probs=50.9
Q ss_pred CHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC--CCCccccccCHhHHHHHHHHHHhhcccchhh
Q 024023 184 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHNIKEAIPEIWEGEGEQLEQ 261 (274)
Q Consensus 184 ~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~~l~~l~~~l~~~~~~~~~~~~~ 261 (274)
|.++.+.+.++-| ..+.+|||+-||+.|-+.+.++.-.++.... .-.||+-+..|..+.+.|-..-...=.+...
T Consensus 769 KA~v~~llq~~t~---krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItqF~Hv~rLLl~HGR~SYkrsa~ 845 (1051)
T KOG0210|consen 769 KAQVVRLLQKKTG---KRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQFSHVSRLLLWHGRNSYKRSAK 845 (1051)
T ss_pred HHHHHHHHHHhhC---ceEEEEcCCCccchheeecccceeeecccccccchhccccHHHHHHHHHHhhccccchHHHHHH
Confidence 3445544444445 7799999999999998887665433333222 4468999999999998876555554444443
Q ss_pred hc
Q 024023 262 VI 263 (274)
Q Consensus 262 ~~ 263 (274)
+.
T Consensus 846 la 847 (1051)
T KOG0210|consen 846 LA 847 (1051)
T ss_pred HH
Confidence 33
No 200
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=95.11 E-value=0.17 Score=39.98 Aligned_cols=21 Identities=19% Similarity=0.313 Sum_probs=18.3
Q ss_pred EEEEcCChhcHHHHHHcCCeE
Q 024023 202 TIFFDDSARNIASAKAAGLHT 222 (274)
Q Consensus 202 ~i~VGDs~~Di~~a~~~G~~~ 222 (274)
...+|++.+|+.+-+++|++.
T Consensus 122 ~agfGN~~tDv~aY~~vGip~ 142 (157)
T PF08235_consen 122 YAGFGNRSTDVIAYKAVGIPK 142 (157)
T ss_pred EEecCCcHHHHHHHHHcCCCh
Confidence 557899999999999999964
No 201
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=95.08 E-value=0.067 Score=46.00 Aligned_cols=48 Identities=23% Similarity=0.144 Sum_probs=36.2
Q ss_pred CCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcC---CeEEEECCCC
Q 024023 182 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAG---LHTVIVGSSV 229 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G---~~~v~v~~~~ 229 (274)
..|...+..++++.+....-+++.||..+|=.+..... -.++-+..+.
T Consensus 181 ~~KG~a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~~~~ 231 (266)
T COG1877 181 VSKGAAIKYIMDELPFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVGVGS 231 (266)
T ss_pred cchHHHHHHHHhcCCCCCCcceecCCCCccHHHHHhhccCCCceEEecCCc
Confidence 45788899999888877767999999999977777765 4455554443
No 202
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=94.77 E-value=0.11 Score=40.45 Aligned_cols=48 Identities=15% Similarity=0.140 Sum_probs=37.7
Q ss_pred CCCHHHHHHHHHHh-C----CCCCeEEEEcCCh-hcHHHHHHcCCeEEEECCCC
Q 024023 182 KPSLEAIETAIRIA-N----VDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 182 kp~~~~~~~~l~~~-g----~~~~~~i~VGDs~-~Di~~a~~~G~~~v~v~~~~ 229 (274)
+-||..-.+..+.+ | ..++++++|||+. +||-+|...|...+|...|.
T Consensus 117 ~kKP~ct~E~~~y~~~Nshv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv 170 (190)
T KOG2961|consen 117 VKKPACTAEEVEYHFGNSHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGV 170 (190)
T ss_pred ccCCCccHHHHHHHhCCcccCChhHeEEEccchhhhHhhhhhccceeEEecccc
Confidence 34444555566554 4 5789999999999 99999999999999987765
No 203
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=94.65 E-value=0.057 Score=47.59 Aligned_cols=112 Identities=16% Similarity=0.176 Sum_probs=69.7
Q ss_pred hhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHc---CCCCccceeEecccCCCCCCCCCCCCcccccccCccc-----
Q 024023 109 PVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRL---GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQ----- 177 (274)
Q Consensus 109 ~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~---gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 177 (274)
|.+..+|+.| |.++.++||++-+++..-.+.+ .+.++||.|+.--+- |.=+.|...-...+.+-
T Consensus 243 ~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~K-----P~Fftde~rPfR~~dek~~sl~ 317 (510)
T KOG2470|consen 243 PQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANK-----PEFFTDERRPFRKYDEKRGSLL 317 (510)
T ss_pred HHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCC-----CcccccccCcchhhcccccchh
Confidence 5566666666 5889999999999988655443 456889997764321 11223333100000000
Q ss_pred ------ccCCC-CCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHHHH-HcCCeEEEE
Q 024023 178 ------RILCK-PSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAK-AAGLHTVIV 225 (274)
Q Consensus 178 ------~~~~k-p~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~a~-~~G~~~v~v 225 (274)
..+|| -....+...++--|....+++++||++ +|+.-.. ..||.+..+
T Consensus 318 wdkv~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAI 374 (510)
T KOG2470|consen 318 WDKVDKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAI 374 (510)
T ss_pred hhhhhhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccc
Confidence 00111 012346677777889899999999999 7987766 789988655
No 204
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=94.57 E-value=0.88 Score=37.86 Aligned_cols=41 Identities=12% Similarity=-0.023 Sum_probs=25.8
Q ss_pred HHHHHHHHHHhCC-CCC-eEEEEcCChhcHHHHHHcCCeEEEEC
Q 024023 185 LEAIETAIRIANV-DPK-KTIFFDDSARNIASAKAAGLHTVIVG 226 (274)
Q Consensus 185 ~~~~~~~l~~~g~-~~~-~~i~VGDs~~Di~~a~~~G~~~v~v~ 226 (274)
..+...+++.+.. ... .++.+|||+||+.+.. .+...+.|.
T Consensus 193 g~Aa~~ll~~y~rl~~~r~t~~~GDg~nD~Pl~e-v~d~AfiV~ 235 (274)
T COG3769 193 GQAANWLLETYRRLGGARTTLGLGDGPNDAPLLE-VMDYAFIVK 235 (274)
T ss_pred cHHHHHHHHHHHhcCceeEEEecCCCCCcccHHH-hhhhheeec
Confidence 3355555555433 223 4899999999998875 554555453
No 205
>PTZ00174 phosphomannomutase; Provisional
Probab=94.50 E-value=0.052 Score=46.26 Aligned_cols=37 Identities=19% Similarity=0.237 Sum_probs=29.3
Q ss_pred CCccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCC
Q 024023 19 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHI 57 (274)
Q Consensus 19 ~~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~ 57 (274)
|++|+|+||+||||+++...+.....+++++ +++.|+
T Consensus 3 ~~~klia~DlDGTLL~~~~~is~~~~~ai~~--l~~~Gi 39 (247)
T PTZ00174 3 MKKTILLFDVDGTLTKPRNPITQEMKDTLAK--LKSKGF 39 (247)
T ss_pred CCCeEEEEECcCCCcCCCCCCCHHHHHHHHH--HHHCCC
Confidence 4589999999999999888888888887766 334454
No 206
>PLN03017 trehalose-phosphatase
Probab=94.16 E-value=0.26 Score=44.35 Aligned_cols=74 Identities=11% Similarity=0.058 Sum_probs=56.3
Q ss_pred CCCHHHHHHHHHHhCCCC---CeEEEEcCChhcHHHHHHcC----CeEEEECCCCCCCCccccccCHhHHHHHHHHHHhh
Q 024023 182 KPSLEAIETAIRIANVDP---KKTIFFDDSARNIASAKAAG----LHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEG 254 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~---~~~i~VGDs~~Di~~a~~~G----~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~~~~~~ 254 (274)
-.|+.+++.+++.+|... .-.+|+||-.+|-.+.+.+. --.|.|........|.|.+.+..++.++|..+..-
T Consensus 282 ~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~~ 361 (366)
T PLN03017 282 WDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPKDTDASYSLQDPSEVMDFLARLVEW 361 (366)
T ss_pred CCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCCCCcceEeCCCHHHHHHHHHHHHHH
Confidence 456889999999998753 35899999999988887652 12345553334577999999999999999888654
Q ss_pred c
Q 024023 255 E 255 (274)
Q Consensus 255 ~ 255 (274)
.
T Consensus 362 ~ 362 (366)
T PLN03017 362 K 362 (366)
T ss_pred H
Confidence 3
No 207
>PLN02151 trehalose-phosphatase
Probab=94.10 E-value=0.23 Score=44.57 Aligned_cols=71 Identities=17% Similarity=0.157 Sum_probs=54.2
Q ss_pred CCCHHHHHHHHHHhCCCCC---eEEEEcCChhcHHHHHHc-----CCeEEEECCCCCCCCccccccCHhHHHHHHHHHHh
Q 024023 182 KPSLEAIETAIRIANVDPK---KTIFFDDSARNIASAKAA-----GLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWE 253 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~---~~i~VGDs~~Di~~a~~~-----G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~~~~~ 253 (274)
-.|..+++.+++.++.... -++|+||-.+|-.+.+.+ |++ +.|..+.....|.|.+.+..++.++|..+..
T Consensus 268 ~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~g-I~Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~ 346 (354)
T PLN02151 268 WDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLG-ILVSKYAKETNASYSLQEPDEVMEFLERLVE 346 (354)
T ss_pred CCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCcc-EEeccCCCCCcceEeCCCHHHHHHHHHHHHH
Confidence 4568899999999886533 389999999998887754 332 4454433456799999999999999988764
No 208
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=94.03 E-value=0.043 Score=45.94 Aligned_cols=26 Identities=23% Similarity=0.280 Sum_probs=22.9
Q ss_pred EEEecCCCccCCchhHHHHHHHHHHH
Q 024023 24 LLFDLDDTLYPLSTGFNLACRRNIEE 49 (274)
Q Consensus 24 viFDlDGTL~d~~~~~~~~~~~~~~~ 49 (274)
|+||+||||+++...+.+...+++.+
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~ 26 (254)
T PF08282_consen 1 IFSDLDGTLLNSDGKISPETIEALKE 26 (254)
T ss_dssp EEEECCTTTCSTTSSSCHHHHHHHHH
T ss_pred cEEEECCceecCCCeeCHHHHHHHHh
Confidence 68999999999888888888888877
No 209
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=93.51 E-value=1.3 Score=38.24 Aligned_cols=141 Identities=12% Similarity=0.091 Sum_probs=75.3
Q ss_pred CCCCCChhHHHHHHhC---CCcEEEEeCCCh---HHHHHHHHH-cCCCCccceeEecccCCCCCCCCCCCCcccccccCc
Q 024023 103 EKLKPDPVLRNLLLSM---PQRKIIFTNADQ---KHAMEVLGR-LGLEDCFEGIICFETINPRLQPADNTDGIENNSFSS 175 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l---~~~~~i~s~~~~---~~~~~~l~~-~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (274)
..-.++||+.++|+.| |.+++++||++. +.+...|+. .+++...+.|+++-..... ++.... ..+
T Consensus 21 ~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~~at~~-----~l~~~~---~~~ 92 (269)
T COG0647 21 RGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSGDATAD-----YLAKQK---PGK 92 (269)
T ss_pred eCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHHHHHHH-----HHHhhC---CCC
Confidence 4457889999998877 589999999765 345566766 5666667888887543210 000000 000
Q ss_pred ccccCCCCCHHHHHHHHHHhCCC----C-C---eEEEEcCChh-cHHH------HHHcCCeEEEECCCCCCCCccccccC
Q 024023 176 NQRILCKPSLEAIETAIRIANVD----P-K---KTIFFDDSAR-NIAS------AKAAGLHTVIVGSSVPVPPADHALNS 240 (274)
Q Consensus 176 ~~~~~~kp~~~~~~~~l~~~g~~----~-~---~~i~VGDs~~-Di~~------a~~~G~~~v~v~~~~~~~~a~~~~~~ 240 (274)
..... ..+.+...++.+|+. . + .++.+|...+ ..+. +...|+++++-+.....+..+-....
T Consensus 93 kv~vi---G~~~l~~~l~~~G~~~~~~~~~~~~d~Vv~g~d~~~~~e~l~~a~~~i~~g~~fI~tNpD~~~p~~~g~~pg 169 (269)
T COG0647 93 KVYVI---GEEGLKEELEGAGFELVDEEEPARVDAVVVGLDRTLTYEKLAEALLAIAAGAPFIATNPDLTVPTERGLRPG 169 (269)
T ss_pred EEEEE---CCcchHHHHHhCCcEEeccCCCCcccEEEEecCCCCCHHHHHHHHHHHHcCCcEEEeCCCccccCCCCCccC
Confidence 00011 134566777777641 1 1 3555655542 2222 22356666655554444444444555
Q ss_pred HhHHHHHHHHHHhh
Q 024023 241 IHNIKEAIPEIWEG 254 (274)
Q Consensus 241 l~~l~~~l~~~~~~ 254 (274)
-..+...++.+-+.
T Consensus 170 aGai~~~~~~~tg~ 183 (269)
T COG0647 170 AGAIAALLEQATGR 183 (269)
T ss_pred cHHHHHHHHHhhCC
Confidence 55555555544443
No 210
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=93.22 E-value=0.7 Score=40.06 Aligned_cols=84 Identities=19% Similarity=0.203 Sum_probs=52.6
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCC---hHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 107 PDPVLRNLLLSM---PQRKIIFTNAD---QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 107 ~~~~~~~~L~~l---~~~~~i~s~~~---~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
++|++.++|+.| |.+++++||++ .......++++|+....+.++++.
T Consensus 19 ~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~ts~--------------------------- 71 (279)
T TIGR01452 19 VVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFSSA--------------------------- 71 (279)
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEecHH---------------------------
Confidence 445666666555 68899999965 334446778888865556666653
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEE
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTV 223 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v 223 (274)
......+++......+++++|+.. ....++..|+..+
T Consensus 72 -----~~~~~~l~~~~~~~~~v~~iG~~~-~~~~l~~~g~~~~ 108 (279)
T TIGR01452 72 -----LCAARLLRQPPDAPKAVYVIGEEG-LRAELDAAGIRLA 108 (279)
T ss_pred -----HHHHHHHHhhCcCCCEEEEEcCHH-HHHHHHHCCCEEe
Confidence 244555555444456788888753 2345566777654
No 211
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=93.19 E-value=0.6 Score=39.64 Aligned_cols=118 Identities=12% Similarity=0.060 Sum_probs=57.8
Q ss_pred CCChHHHHHHHhccCCCCCCCCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccce--eEecccCCCCCC
Q 024023 86 EFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEG--IICFETINPRLQ 160 (274)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~--i~~~~~~~~~~~ 160 (274)
.+....+.+...+ ..+.+.+|+.++++.| ++++.|+|.|--..+...+++.|.. ++. |++.. ..
T Consensus 74 ~l~k~~i~~~V~~----s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~--~~Nv~VvSN~-M~---- 142 (246)
T PF05822_consen 74 GLTKSEIEEAVKE----SDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVF--HPNVKVVSNF-MD---- 142 (246)
T ss_dssp T-BGGGHHHHHHC----S---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT----BTTEEEEEE--EE----
T ss_pred CcCHHHHHHHHHh----cchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCC--CCCeEEEeee-EE----
Confidence 3445555555544 4567778888887776 5899999999999999999998654 332 22221 00
Q ss_pred CCCCCCcccccccCcccccCCCCCHHHHHHHHHHh-CC-CCCeEEEEcCChhcHHHHHHc
Q 024023 161 PADNTDGIENNSFSSNQRILCKPSLEAIETAIRIA-NV-DPKKTIFFDDSARNIASAKAA 218 (274)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~-g~-~~~~~i~VGDs~~Di~~a~~~ 218 (274)
||.-..-.-+++..++.-.|-+....-...+ .+ ...+++..|||.-|+.|+...
T Consensus 143 ----Fd~~g~l~gF~~~lIH~~NKn~~~l~~~~~~~~~~~R~NvlLlGDslgD~~Ma~G~ 198 (246)
T PF05822_consen 143 ----FDEDGVLVGFKGPLIHTFNKNESALEDSPYFKQLKKRTNVLLLGDSLGDLHMADGV 198 (246)
T ss_dssp ----E-TTSBEEEE-SS---TT-HHHHHHTTHHHHHCTTT--EEEEEESSSGGGGTTTT-
T ss_pred ----ECCcceEeecCCCceEEeeCCcccccCchHHHHhccCCcEEEecCccCChHhhcCC
Confidence 0000011112222222222222111111111 22 347899999999999998765
No 212
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=93.05 E-value=0.24 Score=50.80 Aligned_cols=48 Identities=15% Similarity=0.165 Sum_probs=31.8
Q ss_pred CCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC---CCCccccccCHhHHHH
Q 024023 198 DPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP---VPPADHALNSIHNIKE 246 (274)
Q Consensus 198 ~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~---~~~a~~~~~~l~~l~~ 246 (274)
.+..+++|||+.||+.|.+.|+++. ++...+. ...+|+.+..+.=|..
T Consensus 793 ~~~~TLAIGDGANDVsMIQ~AhVGV-GIsG~EGmQAvmsSD~AIaqFrfL~r 843 (1151)
T KOG0206|consen 793 LKAVTLAIGDGANDVSMIQEAHVGV-GISGQEGMQAVMSSDFAIAQFRFLER 843 (1151)
T ss_pred CCceEEEeeCCCccchheeeCCcCe-eeccchhhhhhhcccchHHHHHHHhh
Confidence 3467999999999999999887763 3433221 3446666555554443
No 213
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=92.22 E-value=0.095 Score=42.96 Aligned_cols=27 Identities=30% Similarity=0.407 Sum_probs=19.9
Q ss_pred EEEEecCCCccCCc-hhHHHHHHHHHHH
Q 024023 23 CLLFDLDDTLYPLS-TGFNLACRRNIEE 49 (274)
Q Consensus 23 ~viFDlDGTL~d~~-~~~~~~~~~~~~~ 49 (274)
+++||+||||+++. ..+.....+++.+
T Consensus 1 li~~D~DgTL~~~~~~~~~~~~~~~l~~ 28 (204)
T TIGR01484 1 LLFFDLDGTLLDPNAHELSPETIEALER 28 (204)
T ss_pred CEEEeCcCCCcCCCCCcCCHHHHHHHHH
Confidence 47899999999865 4566666665555
No 214
>PLN02580 trehalose-phosphatase
Probab=92.02 E-value=0.38 Score=43.68 Aligned_cols=34 Identities=12% Similarity=0.216 Sum_probs=26.1
Q ss_pred CCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHH
Q 024023 106 KPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGR 139 (274)
Q Consensus 106 ~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~ 139 (274)
.+.+++.+.|+.|. .+++|+|+.+...+..++.-
T Consensus 141 ~~s~~~~~aL~~La~~~~VAIVSGR~~~~L~~~l~~ 176 (384)
T PLN02580 141 LMSDAMRSAVKNVAKYFPTAIISGRSRDKVYELVGL 176 (384)
T ss_pred cCCHHHHHHHHHHhhCCCEEEEeCCCHHHHHHHhCC
Confidence 44567777777773 67999999999988877753
No 215
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=91.36 E-value=1.3 Score=39.73 Aligned_cols=44 Identities=16% Similarity=0.228 Sum_probs=32.4
Q ss_pred CHHHHHHHHHHh----CCCCCeEEEEcCCh-----hcHHHHHHcCCeEEEECCCC
Q 024023 184 SLEAIETAIRIA----NVDPKKTIFFDDSA-----RNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 184 ~~~~~~~~l~~~----g~~~~~~i~VGDs~-----~Di~~a~~~G~~~v~v~~~~ 229 (274)
|.-++..+.+-+ ++.+++++.|||-. ||.. |+.++ .++|+.++.
T Consensus 350 Ks~GV~~lQ~y~~~~~~i~~~~tLHVGDQF~s~GaNDfk-aR~a~-~t~WIasP~ 402 (408)
T PF06437_consen 350 KSLGVRALQKYFDPEGGIKPSETLHVGDQFLSAGANDFK-ARLAC-TTAWIASPQ 402 (408)
T ss_pred cHHhHHHHHHHHHhccCCCccceeeehhhhhccCCcchh-hhhhc-eeeEecCHH
Confidence 355676666667 89999999999954 7874 45555 678887754
No 216
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=91.24 E-value=0.15 Score=39.13 Aligned_cols=114 Identities=12% Similarity=0.134 Sum_probs=64.6
Q ss_pred CccEEEEecCCCccCCchhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHhcCcHHHHHHhcCCCChHHHHHHHhcc
Q 024023 20 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGK 99 (274)
Q Consensus 20 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (274)
+.|.+..|+|-||.|....|...+. +.++.++....... .... .. .......+.....+.
T Consensus 2 ~kk~iaIDmD~vLadll~ewv~~~N------~y~D~~lk~~di~g----------wdik---~y-v~~~~g~i~~il~ep 61 (180)
T COG4502 2 NKKTIAIDMDTVLADLLREWVKRYN------IYKDKLLKMSDIKG----------WDIK---NY-VKPECGKIYDILKEP 61 (180)
T ss_pred CCceEEeeHHHHHHHHHHHHHHHhh------hccccCcChHhhcc----------cchh---hc-cCccCCeeeeeccCc
Confidence 4578999999999997766766554 45555554332111 0000 00 000011122222332
Q ss_pred CCCCCCCCChhHHHHHHhC--CCcEEEEeCC--ChHHHHHHH----HHcCCCCccceeEecc
Q 024023 100 LPYEKLKPDPVLRNLLLSM--PQRKIIFTNA--DQKHAMEVL----GRLGLEDCFEGIICFE 153 (274)
Q Consensus 100 ~~~~~~~~~~~~~~~L~~l--~~~~~i~s~~--~~~~~~~~l----~~~gl~~~fd~i~~~~ 153 (274)
...+.+...|++...++.| .+.++|+|.. ......... +.+.+-++=..|+|+.
T Consensus 62 ~fFRnL~V~p~aq~v~keLt~~y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~vfCgn 123 (180)
T COG4502 62 HFFRNLGVQPFAQTVLKELTSIYNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIVFCGN 123 (180)
T ss_pred chhhhcCccccHHHHHHHHHhhheEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEEEecC
Confidence 3346678899999999998 4889999976 444554443 3444444445567765
No 217
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=91.12 E-value=0.66 Score=43.30 Aligned_cols=119 Identities=16% Similarity=0.226 Sum_probs=82.5
Q ss_pred ChhHHHH---HHhCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCC
Q 024023 108 DPVLRNL---LLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPS 184 (274)
Q Consensus 108 ~~~~~~~---L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~ 184 (274)
.||+++- |++++++.+.+|+.++--...+.+..|+++++. .-+
T Consensus 449 K~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDdfiA----------------------------------eat 494 (681)
T COG2216 449 KPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFIA----------------------------------EAT 494 (681)
T ss_pred chhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchhhhh----------------------------------cCC
Confidence 4788775 455579999999999888888888999976542 222
Q ss_pred HHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCC------------------------------CCCc
Q 024023 185 LEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------------------------------VPPA 234 (274)
Q Consensus 185 ~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~------------------------------~~~a 234 (274)
|+-...+.++..-...=+.|.||+.||-.+...+..+.++ ++|.+ ..++
T Consensus 495 PEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AM-NsGTqAAkEAaNMVDLDS~PTKlievV~IGKqlLiTRGa 573 (681)
T COG2216 495 PEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAM-NSGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLLITRGA 573 (681)
T ss_pred hHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhh-ccccHHHHHhhcccccCCCccceehHhhhhhhheeeccc
Confidence 4555667777776667788999999999999888877653 44442 1122
Q ss_pred cc---cccCHhHHHHHHHHHHhhcccchhh
Q 024023 235 DH---ALNSIHNIKEAIPEIWEGEGEQLEQ 261 (274)
Q Consensus 235 ~~---~~~~l~~l~~~l~~~~~~~~~~~~~ 261 (274)
-- +.+|+.....+|+.++.....++..
T Consensus 574 LTTFSIANDvAKYFaIiPA~F~~~~P~l~~ 603 (681)
T COG2216 574 LTTFSIANDVAKYFAIIPAMFAAAYPQLGA 603 (681)
T ss_pred ceeeehhhHHHHHHHHHHHHHHhhcccccc
Confidence 11 2445556666788888776666543
No 218
>PLN02151 trehalose-phosphatase
Probab=91.00 E-value=0.51 Score=42.34 Aligned_cols=33 Identities=9% Similarity=0.032 Sum_probs=24.4
Q ss_pred CCChhHHHHHHhC--CCcEEEEeCCChHHHHHHHH
Q 024023 106 KPDPVLRNLLLSM--PQRKIIFTNADQKHAMEVLG 138 (274)
Q Consensus 106 ~~~~~~~~~L~~l--~~~~~i~s~~~~~~~~~~l~ 138 (274)
.+.|++.+.|+.| +..++|+|+.+...+..++.
T Consensus 120 ~~~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~ 154 (354)
T PLN02151 120 FMSKKMRNTVRKLAKCFPTAIVSGRCREKVSSFVK 154 (354)
T ss_pred cCCHHHHHHHHHHhcCCCEEEEECCCHHHHHHHcC
Confidence 3446666777766 36799999999988887664
No 219
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=90.98 E-value=0.054 Score=46.40 Aligned_cols=93 Identities=14% Similarity=0.193 Sum_probs=66.0
Q ss_pred CCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCC-CCccceeEecccCCCCCCCCCCCCcccccccCcccccCC
Q 024023 105 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGL-EDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 181 (274)
Q Consensus 105 ~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl-~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (274)
+...|++-++|...+ +.+++.|++.......++..+.- ...+.+.+..+..... .+
T Consensus 130 V~kRP~vdeFL~~~s~~~e~v~FTAs~~~Ya~~v~D~LD~~~~i~~~RlyR~~C~~~----------------~g----- 188 (262)
T KOG1605|consen 130 VRKRPHVDEFLSRVSKWYELVLFTASLEVYADPLLDILDPDRKIISHRLYRDSCTLK----------------DG----- 188 (262)
T ss_pred EEcCCCHHHHHHHhHHHHHHHHHHhhhHHHHHHHHHHccCCCCeeeeeecccceEeE----------------CC-----
Confidence 455689999999986 78899999999999999888864 4556665555432211 11
Q ss_pred CCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEE
Q 024023 182 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTV 223 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v 223 (274)
.+-.-+..+|.+.+++++|+|++.-..+--+.|+++-
T Consensus 189 -----~yvKdls~~~~dL~~viIiDNsP~sy~~~p~NgIpI~ 225 (262)
T KOG1605|consen 189 -----NYVKDLSVLGRDLSKVIIVDNSPQSYRLQPENGIPIK 225 (262)
T ss_pred -----cEEEEcceeccCcccEEEEcCChHHhccCccCCCccc
Confidence 1111125567788999999999998888778888753
No 220
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=90.90 E-value=0.3 Score=42.14 Aligned_cols=29 Identities=21% Similarity=0.196 Sum_probs=19.9
Q ss_pred ccEEEEecCCCccCC-----chhHHHHHHHHHHH
Q 024023 21 YECLLFDLDDTLYPL-----STGFNLACRRNIEE 49 (274)
Q Consensus 21 ~k~viFDlDGTL~d~-----~~~~~~~~~~~~~~ 49 (274)
-.+|+||+||||++. ...+.....+++..
T Consensus 14 ~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~ 47 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQL 47 (266)
T ss_pred CEEEEEecCCCCCCCCCCcccccCCHHHHHHHHH
Confidence 358899999999973 34455555555544
No 221
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=90.08 E-value=8.1 Score=32.83 Aligned_cols=135 Identities=12% Similarity=0.169 Sum_probs=72.7
Q ss_pred hhHHHHHHhC---CCcEEEEeC---CChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 109 PVLRNLLLSM---PQRKIIFTN---ADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 109 ~~~~~~L~~l---~~~~~i~s~---~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
|++.++|+.| |.+++++|| .+...+...++.+|+....+.|+++...... ++.... ..+.....+.
T Consensus 20 ~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~~~~~~-----~l~~~~---~~~~v~~lg~ 91 (249)
T TIGR01457 20 PEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTASMATAD-----YMNDLK---LEKTVYVIGE 91 (249)
T ss_pred cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHHHHHHH-----HHHhcC---CCCEEEEEcC
Confidence 4555555544 688999997 4567788889999998777788887532100 000000 0011111122
Q ss_pred CCHHHHHHHHHHhCCC----CCeEEEEcCCh-hc---HHHH---HHcCCeEEEECCCCCCCCccccccCHhHHHHHHHHH
Q 024023 183 PSLEAIETAIRIANVD----PKKTIFFDDSA-RN---IASA---KAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEI 251 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~----~~~~i~VGDs~-~D---i~~a---~~~G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~~~ 251 (274)
+.+...++..|+. ..++|++|... .+ +..| ...|+..++.+.........-.+.....+...++..
T Consensus 92 ---~~l~~~l~~~g~~~~~~~~~~Vvvg~~~~~~y~~l~~a~~~l~~g~~~i~tN~D~~~~~~~~~~~~~G~~~~~i~~~ 168 (249)
T TIGR01457 92 ---EGLKEAIKEAGYVEDKEKPDYVVVGLDRQIDYEKFATATLAIRKGAHFIGTNGDLAIPTERGLLPGNGSLITVLEVA 168 (249)
T ss_pred ---hhHHHHHHHcCCEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCeEEEECCCCCCCCCCCCCCCcHHHHHHHHHH
Confidence 3467777777753 23566666543 23 2212 135888665544433232333445666777666655
Q ss_pred Hhh
Q 024023 252 WEG 254 (274)
Q Consensus 252 ~~~ 254 (274)
...
T Consensus 169 ~~~ 171 (249)
T TIGR01457 169 TGV 171 (249)
T ss_pred hCC
Confidence 433
No 222
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=89.71 E-value=1.1 Score=44.32 Aligned_cols=132 Identities=11% Similarity=0.069 Sum_probs=73.8
Q ss_pred ChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccce--eEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 108 DPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEG--IICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 108 ~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
.||+++.++.| |+.+-.+|+.+..-++.+....|+...=+. .+-+.++... .++-.+.++ +.......
T Consensus 649 RPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~--s~ee~~~i~-----pkl~VlAR 721 (1034)
T KOG0204|consen 649 RPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFREL--SQEERDKIW-----PKLRVLAR 721 (1034)
T ss_pred CCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhhc--CHHHHHhhh-----hhheeeec
Confidence 47777776666 688999999999999999999987643332 2222222210 000001111 11111112
Q ss_pred CCHHHHHHHHHHhCCCCCeEEEE-cCChhcHHHHHHcCCeEEEECCCCC--CCCcccccc--CHhHHHHH
Q 024023 183 PSLEAIETAIRIANVDPKKTIFF-DDSARNIASAKAAGLHTVIVGSSVP--VPPADHALN--SIHNIKEA 247 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~~~~i~V-GDs~~Di~~a~~~G~~~v~v~~~~~--~~~a~~~~~--~l~~l~~~ 247 (274)
..|.--..+.+.+. ...++++| ||+.||-.+.++|.++.++--.|.+ ++..|.++- +|..+...
T Consensus 722 SSP~DK~lLVk~L~-~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~ 790 (1034)
T KOG0204|consen 722 SSPNDKHLLVKGLI-KQGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKA 790 (1034)
T ss_pred CCCchHHHHHHHHH-hcCcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHH
Confidence 22222222222222 22345555 9999999999999999987655554 566776653 44444443
No 223
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=89.15 E-value=2 Score=42.56 Aligned_cols=116 Identities=16% Similarity=0.174 Sum_probs=63.8
Q ss_pred ChhHHHHHHhCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCC-CCCCCCCCcccccccCcccccCCCCCHH
Q 024023 108 DPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPR-LQPADNTDGIENNSFSSNQRILCKPSLE 186 (274)
Q Consensus 108 ~~~~~~~L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~kp~~~ 186 (274)
.|++....+..|++++.+|+..+.-.+...+..|+-. +.--+.++.-.+ -+|.+..+.......+-+......-.++
T Consensus 595 vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~--~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~~ 672 (1019)
T KOG0203|consen 595 VPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIIS--EGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSSE 672 (1019)
T ss_pred CchhhhhhhhhCceEEEEecCccchhhhhhhheeeec--CCchhhhhhHHhcCCcccccCccccceEEEecccccccCHH
Confidence 4777777777789999999998888888888777421 111111110000 0011111111112222222222233345
Q ss_pred HHHHHHHHhC-C-----CC-------------CeEE-EEcCChhcHHHHHHcCCeEEEE
Q 024023 187 AIETAIRIAN-V-----DP-------------KKTI-FFDDSARNIASAKAAGLHTVIV 225 (274)
Q Consensus 187 ~~~~~l~~~g-~-----~~-------------~~~i-~VGDs~~Di~~a~~~G~~~v~v 225 (274)
-+.++++... + .| ..++ +.||+.||-.+.+++.++.++-
T Consensus 673 qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMG 731 (1019)
T KOG0203|consen 673 QLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMG 731 (1019)
T ss_pred HHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeec
Confidence 5566655432 0 12 2344 5599999999999999999873
No 224
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=88.75 E-value=0.19 Score=36.56 Aligned_cols=18 Identities=39% Similarity=0.517 Sum_probs=13.4
Q ss_pred EEEecCCCccCCchhHHH
Q 024023 24 LLFDLDDTLYPLSTGFNL 41 (274)
Q Consensus 24 viFDlDGTL~d~~~~~~~ 41 (274)
++||+||||++....+..
T Consensus 1 ~l~D~dGvl~~g~~~ipg 18 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIPG 18 (101)
T ss_dssp EEEESTTTSEETTEE-TT
T ss_pred CEEeCccEeEeCCCcCcC
Confidence 689999999986655544
No 225
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=87.36 E-value=3 Score=35.63 Aligned_cols=73 Identities=22% Similarity=0.270 Sum_probs=48.0
Q ss_pred CCcEEEEeCCChHHHHHH---HHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHh
Q 024023 119 PQRKIIFTNADQKHAMEV---LGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIA 195 (274)
Q Consensus 119 ~~~~~i~s~~~~~~~~~~---l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~ 195 (274)
.++++++|..+....... |+..|+. +|..+.-- |-+|.. +|+.+
T Consensus 186 piRtalVTAR~apah~RvI~TLr~Wgv~--vDEafFLg---------------------------G~~K~~----vL~~~ 232 (264)
T PF06189_consen 186 PIRTALVTARSAPAHERVIRTLRSWGVR--VDEAFFLG---------------------------GLPKGP----VLKAF 232 (264)
T ss_pred ceEEEEEEcCCCchhHHHHHHHHHcCCc--HhHHHHhC---------------------------CCchhH----HHHhh
Confidence 488999998655433444 4455554 55544322 244444 44444
Q ss_pred CCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 196 NVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 196 g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
+- -||++|...-++.|. .+++++.|+.|.
T Consensus 233 ~p----hIFFDDQ~~H~~~a~-~~vps~hVP~gv 261 (264)
T PF06189_consen 233 RP----HIFFDDQDGHLESAS-KVVPSGHVPYGV 261 (264)
T ss_pred CC----CEeecCchhhhhHhh-cCCCEEeccCCc
Confidence 43 489999999999987 888999888764
No 226
>PRK10444 UMP phosphatase; Provisional
Probab=86.74 E-value=13 Score=31.64 Aligned_cols=133 Identities=9% Similarity=0.044 Sum_probs=69.9
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCChH---HHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 107 PDPVLRNLLLSM---PQRKIIFTNADQK---HAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 107 ~~~~~~~~L~~l---~~~~~i~s~~~~~---~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
++|++.++++.| |.+++++||.+.. .....++.+|+.---+.++++-..... +... .. .+.....
T Consensus 18 ~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~ts~~~~~~-----~L~~--~~--~~~v~~~ 88 (248)
T PRK10444 18 AVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSAMATAD-----FLRR--QE--GKKAYVI 88 (248)
T ss_pred eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEecHHHHHHH-----HHHh--CC--CCEEEEE
Confidence 456777776655 6889999997664 445566677875445667766321100 0000 00 0001111
Q ss_pred CCCCHHHHHHHHHHhCCC----CCeEEEEcCChh-cHHHHH------HcCCeEEEECCCCCCCCccccccCHhHHHHHHH
Q 024023 181 CKPSLEAIETAIRIANVD----PKKTIFFDDSAR-NIASAK------AAGLHTVIVGSSVPVPPADHALNSIHNIKEAIP 249 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~----~~~~i~VGDs~~-Di~~a~------~~G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~ 249 (274)
+. ..+...++..|+. ..+++++|...+ +..... ..|...++.+..... + -...+...+...++
T Consensus 89 g~---~~l~~~l~~~g~~~~~~~~~~Vvvg~~~~~~~~~l~~a~~~l~~g~~~i~~n~D~~~--~-g~~~~~G~~~~~l~ 162 (248)
T PRK10444 89 GE---GALIHELYKAGFTITDINPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPDTHG--R-GFYPACGALCAGIE 162 (248)
T ss_pred cC---HHHHHHHHHCcCEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCC--C-CCcCcHHHHHHHHH
Confidence 12 3455666666654 235788887664 332222 348777766544321 1 23455666666666
Q ss_pred HHHhh
Q 024023 250 EIWEG 254 (274)
Q Consensus 250 ~~~~~ 254 (274)
++.+.
T Consensus 163 ~~~g~ 167 (248)
T PRK10444 163 KISGR 167 (248)
T ss_pred HHhCC
Confidence 65543
No 227
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=86.72 E-value=1.9 Score=36.61 Aligned_cols=93 Identities=13% Similarity=0.003 Sum_probs=49.8
Q ss_pred HHHHHHhCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEec----ccCCCCCCCCCCCCcccccccCcccccC--CCCC
Q 024023 111 LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICF----ETINPRLQPADNTDGIENNSFSSNQRIL--CKPS 184 (274)
Q Consensus 111 ~~~~L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~kp~ 184 (274)
..++|+...+++.|+|.+--..+..+++.......+..+++. ++.+.. .-+++.... +|.
T Consensus 146 ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~pn~k~vSN~~~F~edg~l-------------~gF~~~Lihtfnkn- 211 (298)
T KOG3128|consen 146 FFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHPNVKFVSNYMDFDEDGNL-------------CGFSQPLIHTFNKN- 211 (298)
T ss_pred HHHHHHhCCCceEEEecchHHHHHHHHHHHhccCccHHhhhhhhhhcccchh-------------hhhhHHHHHHHccc-
Confidence 334455557999999999988888887664433222222221 111110 001111111 111
Q ss_pred HHHHHHHHHHhCC--CCCeEEEEcCChhcHHHHHH
Q 024023 185 LEAIETAIRIANV--DPKKTIFFDDSARNIASAKA 217 (274)
Q Consensus 185 ~~~~~~~l~~~g~--~~~~~i~VGDs~~Di~~a~~ 217 (274)
...++...+.+.. ...++++-|||.-|+.||..
T Consensus 212 ~~v~~~~s~yf~~~~~~~nVillGdsigdl~ma~g 246 (298)
T KOG3128|consen 212 SSVLQNESEYFHQLAGRVNVILLGDSIGDLHMADG 246 (298)
T ss_pred hHHHHhhhHHHhhccCCceEEEeccccccchhhcC
Confidence 1233333444433 45789999999999999754
No 228
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=85.03 E-value=0.52 Score=39.99 Aligned_cols=15 Identities=33% Similarity=0.527 Sum_probs=12.8
Q ss_pred CccEEEEecCCCccC
Q 024023 20 NYECLLFDLDDTLYP 34 (274)
Q Consensus 20 ~~k~viFDlDGTL~d 34 (274)
+..+++||+||||++
T Consensus 2 ~~~~l~lD~DGTL~~ 16 (244)
T TIGR00685 2 RKRAFFFDYDGTLSE 16 (244)
T ss_pred CcEEEEEecCccccC
Confidence 346899999999996
No 229
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=85.01 E-value=1.2 Score=45.18 Aligned_cols=36 Identities=17% Similarity=0.357 Sum_probs=27.8
Q ss_pred CCChhHHHHHHhC----CCcEEEEeCCChHHHHHHHHHcC
Q 024023 106 KPDPVLRNLLLSM----PQRKIIFTNADQKHAMEVLGRLG 141 (274)
Q Consensus 106 ~~~~~~~~~L~~l----~~~~~i~s~~~~~~~~~~l~~~g 141 (274)
.+.|++.++|+.| +..++|+|+.+...+...+...+
T Consensus 622 ~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~ 661 (934)
T PLN03064 622 RLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFD 661 (934)
T ss_pred CCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCC
Confidence 4667777777777 46799999999998888876543
No 230
>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]
Probab=84.50 E-value=4.5 Score=36.41 Aligned_cols=44 Identities=14% Similarity=0.018 Sum_probs=37.1
Q ss_pred CCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECC
Q 024023 183 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGS 227 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~ 227 (274)
.|...|+++.+++|- ....++|||+.-.-.+|++..|++.-+..
T Consensus 409 GKescFerI~~RFg~-K~~yvvIgdG~eee~aAK~ln~PfwrI~~ 452 (468)
T KOG3107|consen 409 GKESCFERIQSRFGR-KVVYVVIGDGVEEEQAAKALNMPFWRISS 452 (468)
T ss_pred cHHHHHHHHHHHhCC-ceEEEEecCcHHHHHHHHhhCCceEeecc
Confidence 347899999999998 46678899998888899999999876654
No 231
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=82.92 E-value=2.1 Score=42.86 Aligned_cols=78 Identities=6% Similarity=-0.106 Sum_probs=56.2
Q ss_pred CCCCHHHHHHHHHHh------CCCCCeEEEEcCCh-hcHHHHHHcCCeE------------------------------E
Q 024023 181 CKPSLEAIETAIRIA------NVDPKKTIFFDDSA-RNIASAKAAGLHT------------------------------V 223 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~------g~~~~~~i~VGDs~-~Di~~a~~~G~~~------------------------------v 223 (274)
+..|+.+++.+++++ +..++-++++||.. .|=.|.+..+-.. +
T Consensus 676 gvnKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gdd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 755 (797)
T PLN03063 676 GVTKGAAIGRILGEIVHNKSMTTPIDFVFCSGYFLEKDEDVYTFFEPEILSKKKSSSSNYSDSDKKVSSNLVDLKGENYF 755 (797)
T ss_pred CCChHHHHHHHHHHhhhccccCCCCCEEEEeCCCCCCcHHHHHhccccccccccccccccccccccccccccccccCceE
Confidence 346678888888876 33567799999976 4877777654211 2
Q ss_pred EECCCCCCCCccccccCHhHHHHHHHHHHhhcccc
Q 024023 224 IVGSSVPVPPADHALNSIHNIKEAIPEIWEGEGEQ 258 (274)
Q Consensus 224 ~v~~~~~~~~a~~~~~~l~~l~~~l~~~~~~~~~~ 258 (274)
.|.-|.....|.|.+++..++.++|..+.....+.
T Consensus 756 ~v~VG~~~s~A~y~l~~~~eV~~lL~~l~~~~~~~ 790 (797)
T PLN03063 756 SCAIGQARTKARYVLDSSNDVVSLLHKLAVANTTM 790 (797)
T ss_pred EEEECCCCccCeecCCCHHHHHHHHHHHhccCccc
Confidence 33344456789999999999999999988765443
No 232
>PLN03017 trehalose-phosphatase
Probab=80.83 E-value=1.3 Score=39.94 Aligned_cols=30 Identities=20% Similarity=0.270 Sum_probs=20.2
Q ss_pred CccEEEEecCCCcc---C-Cch-hHHHHHHHHHHH
Q 024023 20 NYECLLFDLDDTLY---P-LST-GFNLACRRNIEE 49 (274)
Q Consensus 20 ~~k~viFDlDGTL~---d-~~~-~~~~~~~~~~~~ 49 (274)
+..++++|+||||+ + ... .+.....+++.+
T Consensus 110 k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~ 144 (366)
T PLN03017 110 KQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKK 144 (366)
T ss_pred CCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHH
Confidence 34678889999999 3 333 466666666555
No 233
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=79.07 E-value=2.1 Score=35.96 Aligned_cols=59 Identities=15% Similarity=0.145 Sum_probs=30.0
Q ss_pred CCCHHHHHHHHHHhCCC---CCeEEEEcCChhcHHHHHHcCCe-----EEEECCCC---CCCCccccccC
Q 024023 182 KPSLEAIETAIRIANVD---PKKTIFFDDSARNIASAKAAGLH-----TVIVGSSV---PVPPADHALNS 240 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~---~~~~i~VGDs~~Di~~a~~~G~~-----~v~v~~~~---~~~~a~~~~~~ 240 (274)
..|..++..+++.++.. +.-++++||..+|-.+.+.+.-. .+.+.... ....|+|.+++
T Consensus 164 ~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 164 VNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp --HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES-----------------
T ss_pred CChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeeccccccccccccccc
Confidence 45788999999998876 77899999999998888875443 34454433 34566666654
No 234
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=78.15 E-value=2 Score=42.66 Aligned_cols=15 Identities=47% Similarity=0.678 Sum_probs=13.6
Q ss_pred CccEEEEecCCCccC
Q 024023 20 NYECLLFDLDDTLYP 34 (274)
Q Consensus 20 ~~k~viFDlDGTL~d 34 (274)
+.++++||+||||++
T Consensus 491 ~~rLi~~D~DGTL~~ 505 (726)
T PRK14501 491 SRRLLLLDYDGTLVP 505 (726)
T ss_pred cceEEEEecCccccC
Confidence 568999999999997
No 235
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=76.54 E-value=26 Score=29.45 Aligned_cols=49 Identities=24% Similarity=0.283 Sum_probs=35.8
Q ss_pred CCCChhHHHHHHhC---CCcEEEEeCCC---hHHHHHHHHH-cCCCCccceeEecc
Q 024023 105 LKPDPVLRNLLLSM---PQRKIIFTNAD---QKHAMEVLGR-LGLEDCFEGIICFE 153 (274)
Q Consensus 105 ~~~~~~~~~~L~~l---~~~~~i~s~~~---~~~~~~~l~~-~gl~~~fd~i~~~~ 153 (274)
-.++|++.++++.+ +.++.++||.+ .......+.. +|+.--.+.++++-
T Consensus 13 ~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits~ 68 (236)
T TIGR01460 13 HKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITSG 68 (236)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeHH
Confidence 35688999998887 68899999654 4555566666 78766677787764
No 236
>PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function.; PDB: 2NN4_A.
Probab=75.99 E-value=1.4 Score=28.85 Aligned_cols=26 Identities=12% Similarity=0.295 Sum_probs=16.9
Q ss_pred HHHHHHHHhCCCCCeEEEEcCChhcHHHHH
Q 024023 187 AIETAIRIANVDPKKTIFFDDSARNIASAK 216 (274)
Q Consensus 187 ~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~ 216 (274)
-+.+.++++|+ .+++||...|++++.
T Consensus 6 DVqQLLK~fG~----~IY~gdr~~DielM~ 31 (62)
T PF06014_consen 6 DVQQLLKKFGI----IIYVGDRLWDIELME 31 (62)
T ss_dssp HHHHHHHTTS---------S-HHHHHHHHH
T ss_pred HHHHHHHHCCE----EEEeCChHHHHHHHH
Confidence 35788999997 789999999998875
No 237
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=75.55 E-value=1.9 Score=33.50 Aligned_cols=16 Identities=38% Similarity=0.547 Sum_probs=13.6
Q ss_pred ccEEEEecCCCccCCc
Q 024023 21 YECLLFDLDDTLYPLS 36 (274)
Q Consensus 21 ~k~viFDlDGTL~d~~ 36 (274)
.+.+++|+||||+.+.
T Consensus 2 k~~lvldld~tl~~~~ 17 (148)
T smart00577 2 KKTLVLDLDETLVHST 17 (148)
T ss_pred CcEEEEeCCCCeECCC
Confidence 3689999999999854
No 238
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=73.59 E-value=3.4 Score=41.76 Aligned_cols=17 Identities=35% Similarity=0.612 Sum_probs=14.4
Q ss_pred CccEEEEecCCCccCCc
Q 024023 20 NYECLLFDLDDTLYPLS 36 (274)
Q Consensus 20 ~~k~viFDlDGTL~d~~ 36 (274)
+.+++++|+||||++..
T Consensus 595 ~~rlI~LDyDGTLlp~~ 611 (854)
T PLN02205 595 TTRAILLDYDGTLMPQA 611 (854)
T ss_pred cCeEEEEecCCcccCCc
Confidence 56899999999999643
No 239
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=73.34 E-value=10 Score=39.07 Aligned_cols=40 Identities=15% Similarity=0.237 Sum_probs=33.1
Q ss_pred CCCCHHHHHHHHHHhCCCCCeE-EEEcCChh-cHHHHHHcCCe
Q 024023 181 CKPSLEAIETAIRIANVDPKKT-IFFDDSAR-NIASAKAAGLH 221 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~-i~VGDs~~-Di~~a~~~G~~ 221 (274)
+-.+..+++.+..++|++.+++ +++|||-| |++... .|.+
T Consensus 954 ~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll-~G~~ 995 (1050)
T TIGR02468 954 LASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLL-GGLH 995 (1050)
T ss_pred CCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHHh-CCce
Confidence 3567999999999999999999 55999998 988764 3443
No 240
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=71.66 E-value=19 Score=36.26 Aligned_cols=35 Identities=11% Similarity=0.260 Sum_probs=27.5
Q ss_pred CCChhHHHHHHhC----CCcEEEEeCCChHHHHHHHHHc
Q 024023 106 KPDPVLRNLLLSM----PQRKIIFTNADQKHAMEVLGRL 140 (274)
Q Consensus 106 ~~~~~~~~~L~~l----~~~~~i~s~~~~~~~~~~l~~~ 140 (274)
.+.|++.++|+.| +..++|+|+.+.+.+...+...
T Consensus 532 ~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~ 570 (797)
T PLN03063 532 GLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEY 570 (797)
T ss_pred CCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCC
Confidence 3567888888888 3678999999998888887643
No 241
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=68.95 E-value=5.5 Score=34.07 Aligned_cols=47 Identities=17% Similarity=0.229 Sum_probs=33.7
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCChH---HHHHHHHHcCCCCccceeEecc
Q 024023 107 PDPVLRNLLLSM---PQRKIIFTNADQK---HAMEVLGRLGLEDCFEGIICFE 153 (274)
Q Consensus 107 ~~~~~~~~L~~l---~~~~~i~s~~~~~---~~~~~l~~~gl~~~fd~i~~~~ 153 (274)
++|++.++++.+ |.+++++||.+.. .....++.+|+.--.+.++++-
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~i~ts~ 74 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDEVFTPA 74 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHHeEcHH
Confidence 456777776665 6889999986544 5777888889874456677764
No 242
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=68.80 E-value=4.5 Score=33.20 Aligned_cols=28 Identities=25% Similarity=0.311 Sum_probs=21.2
Q ss_pred cEEEEecCCCccCCchhHHHHHHHHHHH
Q 024023 22 ECLLFDLDDTLYPLSTGFNLACRRNIEE 49 (274)
Q Consensus 22 k~viFDlDGTL~d~~~~~~~~~~~~~~~ 49 (274)
-++.||+||||..........+.+.++.
T Consensus 12 ~l~lfdvdgtLt~~r~~~~~e~~~~l~~ 39 (252)
T KOG3189|consen 12 TLCLFDVDGTLTPPRQKVTPEMLEFLQK 39 (252)
T ss_pred eEEEEecCCccccccccCCHHHHHHHHH
Confidence 4788999999998777776666665544
No 243
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=68.66 E-value=9 Score=33.83 Aligned_cols=59 Identities=17% Similarity=0.206 Sum_probs=39.7
Q ss_pred cccCcccccCCCCCHHHHHH-------HHHHhC-C-CCCeEEEEcCCh-hcHHHHH---------------HcCCeEEEE
Q 024023 171 NSFSSNQRILCKPSLEAIET-------AIRIAN-V-DPKKTIFFDDSA-RNIASAK---------------AAGLHTVIV 225 (274)
Q Consensus 171 ~~~~~~~~~~~kp~~~~~~~-------~l~~~g-~-~~~~~i~VGDs~-~Di~~a~---------------~~G~~~v~v 225 (274)
++..=+....|||.+-.|.. ..++.+ . .+.+..+|||++ +|+..|. +.||.+|.+
T Consensus 260 tGk~L~~~t~GKPt~ltY~~A~~vl~~~ak~~~~~~~~k~lymvGDNP~sDv~GA~lf~~yap~~~~g~~~~~~w~SILV 339 (389)
T KOG1618|consen 260 TGKPLRYTTLGKPTKLTYDYAEDVLRRQAKRRGGAAPIKKLYMVGDNPMSDVRGANLFHQYAPELGAGGSANYGWISILV 339 (389)
T ss_pred cCCcccccccCCCceehHHhHHHHHHHHHHhhcccCCcceeeeecCCCcccccccccccccccccccccccCCCceEEEE
Confidence 34444445678998644433 332322 2 567888999999 8999996 778888887
Q ss_pred CCCC
Q 024023 226 GSSV 229 (274)
Q Consensus 226 ~~~~ 229 (274)
.+|.
T Consensus 340 ~TGV 343 (389)
T KOG1618|consen 340 RTGV 343 (389)
T ss_pred eeee
Confidence 6554
No 244
>PLN02588 glycerol-3-phosphate acyltransferase
Probab=67.46 E-value=16 Score=34.40 Aligned_cols=42 Identities=10% Similarity=0.005 Sum_probs=28.4
Q ss_pred CChhHHHHHHhCCCcEEEEeCCChHHHHHHHHHc-CCCCccceeEecc
Q 024023 107 PDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRL-GLEDCFEGIICFE 153 (274)
Q Consensus 107 ~~~~~~~~L~~l~~~~~i~s~~~~~~~~~~l~~~-gl~~~fd~i~~~~ 153 (274)
+.+...+.+..++. -+++|..++-+++.+++.+ |. |.|++.|
T Consensus 134 v~~e~~~v~~~~~~-~~vv~~~PrvMve~Flkeyl~~----d~V~g~E 176 (525)
T PLN02588 134 VGLEMFQVLKRGGK-RVGVSDLPQVMIDVFLRDYLEI----EVVVGRD 176 (525)
T ss_pred cCHHHHHHHhhcCc-EEEEecCCHHHHHHHHHHhcCc----ceEeeee
Confidence 44677778877764 4455559999999999764 33 5555554
No 245
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=65.38 E-value=4.1 Score=32.23 Aligned_cols=15 Identities=40% Similarity=0.629 Sum_probs=12.9
Q ss_pred cEEEEecCCCccCCc
Q 024023 22 ECLLFDLDDTLYPLS 36 (274)
Q Consensus 22 k~viFDlDGTL~d~~ 36 (274)
+.+++|+|+||+.+.
T Consensus 2 ~~lvlDLDeTLi~~~ 16 (162)
T TIGR02251 2 KTLVLDLDETLVHST 16 (162)
T ss_pred cEEEEcCCCCcCCCC
Confidence 479999999999754
No 246
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=65.36 E-value=4.5 Score=31.87 Aligned_cols=18 Identities=33% Similarity=0.403 Sum_probs=14.8
Q ss_pred CccEEEEecCCCccCCch
Q 024023 20 NYECLLFDLDDTLYPLST 37 (274)
Q Consensus 20 ~~k~viFDlDGTL~d~~~ 37 (274)
+...+++|+|.||+.+..
T Consensus 5 ~kl~LVLDLDeTLihs~~ 22 (156)
T TIGR02250 5 KKLHLVLDLDQTLIHTTK 22 (156)
T ss_pred CceEEEEeCCCCcccccc
Confidence 457899999999998554
No 247
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=65.32 E-value=3.5 Score=37.81 Aligned_cols=28 Identities=11% Similarity=0.125 Sum_probs=19.9
Q ss_pred hCCCCCeE-EEEcCChhcHHHHHHcCCeE
Q 024023 195 ANVDPKKT-IFFDDSARNIASAKAAGLHT 222 (274)
Q Consensus 195 ~g~~~~~~-i~VGDs~~Di~~a~~~G~~~ 222 (274)
+++.++.. .-+|...+|+.+-++.|++.
T Consensus 489 lf~e~~PFyAGFGNriTDvisY~~vgIp~ 517 (580)
T COG5083 489 LFIEFDPFYAGFGNRITDVISYSNVGIPK 517 (580)
T ss_pred hhCcCChhhccccccchhheeeccccCCh
Confidence 34444333 36899999999999988864
No 248
>COG2241 CobL Precorrin-6B methylase 1 [Coenzyme metabolism]
Probab=61.12 E-value=26 Score=29.10 Aligned_cols=88 Identities=11% Similarity=0.143 Sum_probs=54.6
Q ss_pred hhHHHHHHhC-CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHH
Q 024023 109 PVLRNLLLSM-PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEA 187 (274)
Q Consensus 109 ~~~~~~L~~l-~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~ 187 (274)
+.+..++... +.+++|++.+++-+.- +..+.-..+..+++.. -|.++.
T Consensus 57 ~~l~~i~~~~~g~~v~VLasGDP~f~G-------~g~~l~~~~~~~~v~i------------------------IPgiSS 105 (210)
T COG2241 57 ESLEEILAERKGRDVVVLASGDPLFSG-------VGRLLRRKFSCEEVEI------------------------IPGISS 105 (210)
T ss_pred HHHHHHHHHhCCCCeEEEecCCcchhh-------hHHHHHHhcCccceEE------------------------ecChhH
Confidence 3555666555 6778888777765442 1111112222233332 788889
Q ss_pred HHHHHHHhCCCCCeEEEE---cCChhcHHHHHHcCCeEEEECC
Q 024023 188 IETAIRIANVDPKKTIFF---DDSARNIASAKAAGLHTVIVGS 227 (274)
Q Consensus 188 ~~~~l~~~g~~~~~~i~V---GDs~~Di~~a~~~G~~~v~v~~ 227 (274)
++.++.++|.+.+++.++ |...+++.....-|-..++...
T Consensus 106 ~q~a~ARlg~~~~~~~~islHgr~~~~l~~~~~~~~~~vil~~ 148 (210)
T COG2241 106 VQLAAARLGWPLQDTEVISLHGRPVELLRPLLENGRRLVILTP 148 (210)
T ss_pred HHHHHHHhCCChHHeEEEEecCCCHHHHHHHHhCCceEEEeCC
Confidence 999999999999988777 4555667766655655555433
No 249
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=60.51 E-value=1.2e+02 Score=26.74 Aligned_cols=40 Identities=18% Similarity=0.206 Sum_probs=29.8
Q ss_pred HHHHHHHHHhC-CCCCeEEEEcCChhc-----HHHHHHcCCeEEEEC
Q 024023 186 EAIETAIRIAN-VDPKKTIFFDDSARN-----IASAKAAGLHTVIVG 226 (274)
Q Consensus 186 ~~~~~~l~~~g-~~~~~~i~VGDs~~D-----i~~a~~~G~~~v~v~ 226 (274)
.-+..+.+.+| +...+++||||+ |+ +.++...|+..-.+.
T Consensus 139 ADl~Ti~E~~g~l~g~k~a~vGDg-NNv~nSl~~~~a~~G~dv~ia~ 184 (310)
T COG0078 139 ADLMTIKEHFGSLKGLKLAYVGDG-NNVANSLLLAAAKLGMDVRIAT 184 (310)
T ss_pred HHHHHHHHhcCcccCcEEEEEcCc-chHHHHHHHHHHHhCCeEEEEC
Confidence 34556777787 688899999999 44 567777899876553
No 250
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=60.41 E-value=25 Score=29.87 Aligned_cols=48 Identities=13% Similarity=0.078 Sum_probs=34.7
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecc
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFE 153 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~ 153 (274)
.+.+...+.|+++ |.+++++|+.+...+...++.+++....+.+++.+
T Consensus 20 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~N 70 (270)
T PRK10513 20 TISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNN 70 (270)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcC
Confidence 3445566666655 68999999999999999999998764334455543
No 251
>KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=59.95 E-value=74 Score=29.25 Aligned_cols=105 Identities=18% Similarity=0.128 Sum_probs=57.2
Q ss_pred CCChhHHHHHHhC-----CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccC
Q 024023 106 KPDPVLRNLLLSM-----PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 180 (274)
Q Consensus 106 ~~~~~~~~~L~~l-----~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (274)
++-|++..+|..+ ....+-+-++.......+|+.- ||.|+....-..
T Consensus 141 Els~n~a~~lakllp~Yld~~~~~VV~Ggv~ETt~LL~~r-----fD~IfyTGsp~V----------------------- 192 (477)
T KOG2456|consen 141 ELSPNTAKLLAKLLPQYLDQDLIRVVNGGVPETTELLKQR-----FDHIFYTGSPRV----------------------- 192 (477)
T ss_pred hcChhHHHHHHHHHHHhcCcceEEEecCCCchHHHHHHhh-----ccEEEecCCchH-----------------------
Confidence 3446777777665 2445544455455555555542 788776643221
Q ss_pred CCCCHHHHHHHHHHh------CCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCCccccccCHhH
Q 024023 181 CKPSLEAIETAIRIA------NVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHN 243 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~------g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~a~~~~~~l~~ 243 (274)
..++..++.+. .+-.+.-++|+|+- |++.+.+-=+...|+++|...-.+||++-+-+-
T Consensus 193 ----gkIim~aAaKhLTPvtLELGGKsP~~vd~~~-d~~ia~~RI~~gk~~N~GQtCvapDYiL~~k~~ 256 (477)
T KOG2456|consen 193 ----GKIIMAAAAKHLTPVTLELGGKSPCYVDKNC-DLKIAARRIAWGKWMNSGQTCVAPDYILCSKSI 256 (477)
T ss_pred ----HHHHHHHHHhcCCcEEEEcCCCCCeeecCCc-CHHHHHHHHHHHhhccCCCeeccCCeEEecHhh
Confidence 12444444441 22234557787776 555544432233457777777778888766443
No 252
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=58.23 E-value=5.1 Score=33.62 Aligned_cols=10 Identities=50% Similarity=0.846 Sum_probs=7.4
Q ss_pred EEecCCCccC
Q 024023 25 LFDLDDTLYP 34 (274)
Q Consensus 25 iFDlDGTL~d 34 (274)
+||+||||.+
T Consensus 1 ~lDyDGTL~p 10 (235)
T PF02358_consen 1 FLDYDGTLAP 10 (235)
T ss_dssp EEE-TTTSS-
T ss_pred CcccCCccCC
Confidence 6899999996
No 253
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=53.86 E-value=25 Score=34.24 Aligned_cols=52 Identities=19% Similarity=0.284 Sum_probs=42.8
Q ss_pred CCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCC-Ccc-ceeEecccCC
Q 024023 105 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLE-DCF-EGIICFETIN 156 (274)
Q Consensus 105 ~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~-~~f-d~i~~~~~~~ 156 (274)
+++.|++.++|+++. +.+.|.|-+.+..+..+++.+.-. .|| |.|++.++..
T Consensus 200 vKlRP~~~efL~~~sklfemhVyTmg~R~YA~~i~~liDP~~~lF~dRIisrde~~ 255 (635)
T KOG0323|consen 200 VKLRPFVHEFLKEANKLFEMHVYTMGTRDYALEIAKLIDPEGKYFGDRIISRDESP 255 (635)
T ss_pred EEeCccHHHHHHHHHhhceeEEEeccchHHHHHHHHHhCCCCccccceEEEecCCC
Confidence 567799999999995 889999999999999999988644 456 5688888644
No 254
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=53.63 E-value=28 Score=29.85 Aligned_cols=40 Identities=20% Similarity=0.091 Sum_probs=31.9
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCc
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDC 145 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~ 145 (274)
...+...++|+.+ |.+++++|+.+...+...++.+|+..+
T Consensus 21 ~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~ 63 (273)
T PRK00192 21 YSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDP 63 (273)
T ss_pred cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC
Confidence 3446666666665 689999999999999999999998654
No 255
>COG4483 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=52.88 E-value=14 Score=24.33 Aligned_cols=27 Identities=7% Similarity=0.306 Sum_probs=23.0
Q ss_pred HHHHHHHHhCCCCCeEEEEcCChhcHHHHHH
Q 024023 187 AIETAIRIANVDPKKTIFFDDSARNIASAKA 217 (274)
Q Consensus 187 ~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~ 217 (274)
-+.+.+.++|+ ++++||...||++.+-
T Consensus 6 DVqQlLK~~G~----ivyfg~r~~~iemm~~ 32 (68)
T COG4483 6 DVQQLLKKFGI----IVYFGKRLYDIEMMQI 32 (68)
T ss_pred HHHHHHHHCCe----eeecCCHHHHHHHHHH
Confidence 35788999998 7899999999999863
No 256
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=52.05 E-value=61 Score=28.85 Aligned_cols=81 Identities=10% Similarity=0.062 Sum_probs=49.5
Q ss_pred CCCCChhHHHHHHhC---C-CcEEEEeCCChHHHHHHHHHcCCC-------------CccceeEecccCCCCCCCCCCCC
Q 024023 104 KLKPDPVLRNLLLSM---P-QRKIIFTNADQKHAMEVLGRLGLE-------------DCFEGIICFETINPRLQPADNTD 166 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l---~-~~~~i~s~~~~~~~~~~l~~~gl~-------------~~fd~i~~~~~~~~~~~~~~~~~ 166 (274)
.-.++||+..+++.| + ..+..+||++......+-+.++-. ..+|.++.+-
T Consensus 194 tr~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~efi~~~~~P~GPl~L~~~g~~~~~i~~sg------------- 260 (373)
T COG4850 194 TRQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQEFITNRNFPYGPLLLRRWGGVLDNIIESG------------- 260 (373)
T ss_pred ccCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHHHHHHHhcCCCCCCchhHhhcCCcccccccch-------------
Confidence 346889999888877 3 678999999887655444433221 1123332221
Q ss_pred cccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHH
Q 024023 167 GIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIA 213 (274)
Q Consensus 167 ~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~ 213 (274)
.--|...+..++.++. ..+.+.|||+- .|.+
T Consensus 261 --------------a~rK~~~l~nil~~~p--~~kfvLVGDsGE~Dpe 292 (373)
T COG4850 261 --------------AARKGQSLRNILRRYP--DRKFVLVGDSGEHDPE 292 (373)
T ss_pred --------------hhhcccHHHHHHHhCC--CceEEEecCCCCcCHH
Confidence 1223445666777654 36789999987 7854
No 257
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=50.60 E-value=58 Score=28.61 Aligned_cols=38 Identities=26% Similarity=0.362 Sum_probs=25.2
Q ss_pred CCChhHHHHHHh---CCCcEEEEeCCChHHHHHHH---HHcCCC
Q 024023 106 KPDPVLRNLLLS---MPQRKIIFTNADQKHAMEVL---GRLGLE 143 (274)
Q Consensus 106 ~~~~~~~~~L~~---l~~~~~i~s~~~~~~~~~~l---~~~gl~ 143 (274)
.+.||+.+.++. ++.+++++||.+....+... +++|+.
T Consensus 38 ~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~ 81 (306)
T KOG2882|consen 38 KPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFN 81 (306)
T ss_pred CCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcc
Confidence 455666665554 47889999998776665544 455655
No 258
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=48.87 E-value=35 Score=27.89 Aligned_cols=39 Identities=8% Similarity=-0.085 Sum_probs=31.3
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLED 144 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~ 144 (274)
.+.|...+.|+++ |.+++++|+.+...+...++.+++..
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~ 59 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSG 59 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCC
Confidence 4556777777666 68999999999999999999888763
No 259
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=48.17 E-value=34 Score=28.55 Aligned_cols=31 Identities=13% Similarity=0.105 Sum_probs=25.6
Q ss_pred HHHhCCCcEEEEeCCChHHHHHHHHHcCCCC
Q 024023 114 LLLSMPQRKIIFTNADQKHAMEVLGRLGLED 144 (274)
Q Consensus 114 ~L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~ 144 (274)
.++..|.+++++|+.+...+...++.+|+.+
T Consensus 26 ~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 26 ELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred HHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 3444579999999999999999999999854
No 260
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=47.78 E-value=39 Score=27.77 Aligned_cols=38 Identities=11% Similarity=-0.094 Sum_probs=30.5
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCC
Q 024023 107 PDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLED 144 (274)
Q Consensus 107 ~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~ 144 (274)
+.|...+.|+++ |.+++++|+.+...+...++.+++..
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 61 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSG 61 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC
Confidence 446666776665 68999999999999998888888764
No 261
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=47.46 E-value=36 Score=29.15 Aligned_cols=61 Identities=11% Similarity=0.297 Sum_probs=42.2
Q ss_pred HHHHHHHHhCCCCCeEEEE---cCC---hhcHHHHHHcCCeEEEECCCCCCCCccccccCHhHHHHHHHHH
Q 024023 187 AIETAIRIANVDPKKTIFF---DDS---ARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEI 251 (274)
Q Consensus 187 ~~~~~l~~~g~~~~~~i~V---GDs---~~Di~~a~~~G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~~~ 251 (274)
.=..++++++++ +++- |++ ..=+++|++.|++.+++..+.. ..+..++.+++++.+.+.++
T Consensus 188 ~n~al~~~~~i~---~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~-~~~~~~~~~~~el~~~l~~~ 254 (256)
T TIGR00715 188 LEKALLREYRID---AVVTKASGEQGGELEKVKAAEALGINVIRIARPQT-IPGVAIFDDISQLNQFVARL 254 (256)
T ss_pred HHHHHHHHcCCC---EEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCCC-CCCCccCCCHHHHHHHHHHh
Confidence 334566667764 4444 332 2348999999999999987753 34457789999999888765
No 262
>PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional
Probab=47.18 E-value=79 Score=26.82 Aligned_cols=43 Identities=19% Similarity=0.305 Sum_probs=36.1
Q ss_pred CCCHHHHHHHHHHhCCCCCeEEEEcCChh--cHHHHHHcCCeEEEECC
Q 024023 182 KPSLEAIETAIRIANVDPKKTIFFDDSAR--NIASAKAAGLHTVIVGS 227 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~~i~VGDs~~--Di~~a~~~G~~~v~v~~ 227 (274)
-|.|..-++++...|+ .|+.|||.+. +-+..++.|++.+.+..
T Consensus 73 ~PGP~~ARE~l~~~~i---P~IvI~D~p~~K~~d~l~~~g~GYIivk~ 117 (277)
T PRK00994 73 APGPKKAREILKAAGI---PCIVIGDAPGKKVKDAMEEQGLGYIIVKA 117 (277)
T ss_pred CCCchHHHHHHHhcCC---CEEEEcCCCccchHHHHHhcCCcEEEEec
Confidence 6778888999998887 3999999993 67888999999988754
No 263
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=47.04 E-value=1.8e+02 Score=24.76 Aligned_cols=61 Identities=15% Similarity=0.242 Sum_probs=41.8
Q ss_pred HHHHHHHHHHhCCCCCeEEEE---cCChhc--HHHHHHcCCeEEEECCCCCCCCccccccCHhHHHHHHH
Q 024023 185 LEAIETAIRIANVDPKKTIFF---DDSARN--IASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIP 249 (274)
Q Consensus 185 ~~~~~~~l~~~g~~~~~~i~V---GDs~~D--i~~a~~~G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~ 249 (274)
.+.=..++++++++ +++- |++-.+ +++|+++|++.+++..+... ....++++++++.+.++
T Consensus 183 ~e~n~al~~~~~i~---~lVtK~SG~~g~~eKi~AA~~lgi~vivI~RP~~~-~~~~~~~~~~e~l~~l~ 248 (249)
T PF02571_consen 183 KELNRALFRQYGID---VLVTKESGGSGFDEKIEAARELGIPVIVIKRPPEP-YGDPVVETIEELLDWLE 248 (249)
T ss_pred HHHHHHHHHHcCCC---EEEEcCCCchhhHHHHHHHHHcCCeEEEEeCCCCC-CCCcccCCHHHHHHHHh
Confidence 34455677888865 4444 444322 99999999999999877533 34444788888888764
No 264
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=46.15 E-value=1.2e+02 Score=26.54 Aligned_cols=30 Identities=17% Similarity=0.213 Sum_probs=18.8
Q ss_pred HHHHhCCCcEEEEeCCCh-HHHHHHHHHcCC
Q 024023 113 NLLLSMPQRKIIFTNADQ-KHAMEVLGRLGL 142 (274)
Q Consensus 113 ~~L~~l~~~~~i~s~~~~-~~~~~~l~~~gl 142 (274)
.+|+.+|.+..|+|.... ..+...++.+++
T Consensus 70 ~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~ 100 (291)
T PF14336_consen 70 RALQALGKEVVIVTDERCAPVVKAAVRAAGL 100 (291)
T ss_pred HHHHHcCCeEEEEECHHHHHHHHHHHHHHhh
Confidence 457777889999987544 344444454443
No 265
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=44.62 E-value=72 Score=28.14 Aligned_cols=48 Identities=13% Similarity=0.180 Sum_probs=35.7
Q ss_pred CCCHHHHHHHHHHhCCC------CCeEEEEcCChhcHHHHHH---cCCeEEEECCCC
Q 024023 182 KPSLEAIETAIRIANVD------PKKTIFFDDSARNIASAKA---AGLHTVIVGSSV 229 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~------~~~~i~VGDs~~Di~~a~~---~G~~~v~v~~~~ 229 (274)
+.+.+-++...+.-|++ |--.+++||-.--..|+.. .|+.++.+..+.
T Consensus 322 ~a~~qrfr~~me~aGftIsg~~hPI~pv~lGda~lA~~~ad~lLk~Gi~Vigfs~Pv 378 (417)
T KOG1359|consen 322 QANTQRFREFMEAAGFTISGASHPICPVMLGDARLASKMADELLKRGIYVIGFSYPV 378 (417)
T ss_pred HHHHHHHHHHHHhcCceecCCCCCccceecccHHHHHHHHHHHHhcCceEEeecCCc
Confidence 66677888888888875 3447899999877677665 588888776554
No 266
>PRK12415 fructose 1,6-bisphosphatase II; Reviewed
Probab=43.59 E-value=82 Score=27.90 Aligned_cols=55 Identities=20% Similarity=0.309 Sum_probs=42.9
Q ss_pred cccccCCCCCHHHHHHHHHHhCCCCCe-EEEEcCChh--c-HHHHHHcCCeEEEECCCC
Q 024023 175 SNQRILCKPSLEAIETAIRIANVDPKK-TIFFDDSAR--N-IASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 175 ~~~~~~~kp~~~~~~~~l~~~g~~~~~-~i~VGDs~~--D-i~~a~~~G~~~v~v~~~~ 229 (274)
.+.....+|-.+.++.+.+.+|..+++ +++|=|.+. + |+..+++|...-+++.|.
T Consensus 130 ~Gaidl~~~~~~Nl~~~A~a~~k~~~dltV~vLdRpRH~~lI~eir~~Gari~Li~DGD 188 (322)
T PRK12415 130 AGKISLDDPIEKTIEIVAEANNKKIRDLTVIVQERERHQDIIDRVRAKGARVKLFGDGD 188 (322)
T ss_pred CceecCCCCHHHHHHHHHHHcCCChhHeEEEEEcCchHHHHHHHHHHcCCeEEEecccc
Confidence 344455688889999999999988776 567788883 2 888889999988887766
No 267
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=43.56 E-value=61 Score=27.40 Aligned_cols=39 Identities=18% Similarity=0.332 Sum_probs=32.5
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLED 144 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~ 144 (274)
...+...+.|+.+ |.+++++|+.+...+...++.+++..
T Consensus 20 ~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~ 61 (264)
T COG0561 20 TISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG 61 (264)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc
Confidence 3556777777754 79999999999999999999999875
No 268
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=42.24 E-value=14 Score=33.44 Aligned_cols=18 Identities=28% Similarity=0.484 Sum_probs=14.5
Q ss_pred CccEEEEecCCCccCCch
Q 024023 20 NYECLLFDLDDTLYPLST 37 (274)
Q Consensus 20 ~~k~viFDlDGTL~d~~~ 37 (274)
.-|.+.||+||||+++..
T Consensus 74 ~~K~i~FD~dgtlI~t~s 91 (422)
T KOG2134|consen 74 GSKIIMFDYDGTLIDTKS 91 (422)
T ss_pred CcceEEEecCCceeecCC
Confidence 457899999999997443
No 269
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=41.97 E-value=26 Score=35.16 Aligned_cols=30 Identities=13% Similarity=0.257 Sum_probs=26.8
Q ss_pred CeEEEEcCChhcHHHHHHcCCeEEEECCCC
Q 024023 200 KKTIFFDDSARNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 200 ~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~ 229 (274)
--++|.||+.||+-+.+.|..+.+..++..
T Consensus 807 y~TLMCGDGTNDVGALK~AhVGVALL~~~~ 836 (1160)
T KOG0209|consen 807 YVTLMCGDGTNDVGALKQAHVGVALLNNPE 836 (1160)
T ss_pred eEEEEecCCCcchhhhhhcccceehhcCCh
Confidence 459999999999999999999999887666
No 270
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=41.21 E-value=53 Score=26.89 Aligned_cols=31 Identities=19% Similarity=0.124 Sum_probs=26.3
Q ss_pred HHHHhCCCcEEEEeCCChHHHHHHHHHcCCC
Q 024023 113 NLLLSMPQRKIIFTNADQKHAMEVLGRLGLE 143 (274)
Q Consensus 113 ~~L~~l~~~~~i~s~~~~~~~~~~l~~~gl~ 143 (274)
..++..|++++++||.+...+...++.+++.
T Consensus 26 ~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 26 TRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 3445567999999999999999999999875
No 271
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=41.15 E-value=61 Score=27.25 Aligned_cols=38 Identities=21% Similarity=0.346 Sum_probs=30.1
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLE 143 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~ 143 (274)
.+.+...+.|+++ |.+++++|+.+...+...++.+++.
T Consensus 16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~ 56 (256)
T TIGR00099 16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLD 56 (256)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 3445666666665 6899999999999999999988875
No 272
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=40.78 E-value=2.7e+02 Score=24.89 Aligned_cols=97 Identities=14% Similarity=0.148 Sum_probs=62.7
Q ss_pred CCCCChhHHHHHHhC------CCcEEEEeCCChHHHHHHHHHcCCCCccceeEe-cccCCCCCCCCCCCCcccccccCcc
Q 024023 104 KLKPDPVLRNLLLSM------PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIIC-FETINPRLQPADNTDGIENNSFSSN 176 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l------~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (274)
...++|+..++++.. |+.+.++++.+....+.... +|.. .+-- .+.++..
T Consensus 176 ~~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l~~-~g~~----avmPl~~pIGsg------------------ 232 (326)
T PRK11840 176 AKTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLED-AGAV----AVMPLGAPIGSG------------------ 232 (326)
T ss_pred CCCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHh-cCCE----EEeeccccccCC------------------
Confidence 345567776666654 56676677776666654433 3431 1111 2333332
Q ss_pred cccCCCCCHHHHHHHHHHhCCCCCeEEEEcCCh---hcHHHHHHcCCeEEEECCCCC
Q 024023 177 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSA---RNIASAKAAGLHTVIVGSSVP 230 (274)
Q Consensus 177 ~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~---~Di~~a~~~G~~~v~v~~~~~ 230 (274)
.+-.+|+.++.+.+... -.+++|-+. .|...|-+.|+..++++++-.
T Consensus 233 ---~gv~~p~~i~~~~e~~~----vpVivdAGIg~~sda~~AmelGadgVL~nSaIa 282 (326)
T PRK11840 233 ---LGIQNPYTIRLIVEGAT----VPVLVDAGVGTASDAAVAMELGCDGVLMNTAIA 282 (326)
T ss_pred ---CCCCCHHHHHHHHHcCC----CcEEEeCCCCCHHHHHHHHHcCCCEEEEcceec
Confidence 23558999999998843 357788776 699999999999999988763
No 273
>PF13535 ATP-grasp_4: ATP-grasp domain; PDB: 3VMM_A 3LN6_A 3LN7_B 2PN1_A 4DIM_A.
Probab=40.50 E-value=1.7e+02 Score=22.72 Aligned_cols=71 Identities=18% Similarity=0.185 Sum_probs=46.4
Q ss_pred HHHHHHHHHHhCCCCCeEEEEcCChhcHHH-HHHcCCeEEEECCCCCCCCccccccCHhHHHHHHHHHHhhcc
Q 024023 185 LEAIETAIRIANVDPKKTIFFDDSARNIAS-AKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEGEG 256 (274)
Q Consensus 185 ~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~-a~~~G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~~~~~~~~ 256 (274)
.....+++.+.|++.-+.+.+.+. .++.. +...|.+.+.-+........-+.+.+.+++...+..+.....
T Consensus 5 K~~~~~~~~~~gv~~P~~~~~~~~-~~~~~~~~~~~~p~vvKp~~g~gs~gv~~~~~~~~l~~~~~~~~~~~~ 76 (184)
T PF13535_consen 5 KYRMRELLKKAGVPVPKTRIVDSE-EELRAFAEDLGFPFVVKPVDGSGSRGVFIVHSPEELEAALAEIREDSP 76 (184)
T ss_dssp HHHHHHHHHHHTS----EEEECSH-HHHHHHHHHSSSSEEEEESS-STTTT-EEESSHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHcCcCCCCEEEECCH-HHHHHHHHHcCCCEEEEcCccccCCCEEEeCCHHHHHHHHHHHHHhcc
Confidence 356778888999976667777654 45444 566788877655444445667779999999999888866544
No 274
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=40.44 E-value=59 Score=27.67 Aligned_cols=39 Identities=15% Similarity=0.113 Sum_probs=31.1
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLED 144 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~ 144 (274)
.+.+...+.|+++ |.+++++|+.+...+...++.+++..
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 60 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDA 60 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCC
Confidence 3456666666666 68999999999999999999998763
No 275
>cd00885 cinA Competence-damaged protein. CinA is the first gene in the competence- inducible (cin) operon and is thought to be specifically required at some stage in the process of transformation. This domain is closely related to a domain, found in a variety of proteins involved in biosynthesis of molybdopterin cofactor, where the domain is presumed to bind molybdopterin.
Probab=39.82 E-value=85 Score=24.98 Aligned_cols=89 Identities=16% Similarity=0.113 Sum_probs=51.1
Q ss_pred CHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHH---cCCeEEEECCCCCCCCcccc-----------ccCHhHHHHHHH
Q 024023 184 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKA---AGLHTVIVGSSVPVPPADHA-----------LNSIHNIKEAIP 249 (274)
Q Consensus 184 ~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~---~G~~~v~v~~~~~~~~a~~~-----------~~~l~~l~~~l~ 249 (274)
+...+...++.+|+....+..|+|....|..+-. .....+....|...-..|++ +.-..++.+.++
T Consensus 20 n~~~l~~~L~~~G~~v~~~~~v~Dd~~~I~~~l~~~~~~~dlVIttGG~G~t~~D~t~ea~~~~~~~~l~~~~e~~~~i~ 99 (170)
T cd00885 20 NAAFLAKELAELGIEVYRVTVVGDDEDRIAEALRRASERADLVITTGGLGPTHDDLTREAVAKAFGRPLVLDEEALERIE 99 (170)
T ss_pred HHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhCCCEEEECCCCCCCCCChHHHHHHHHhCCCcccCHHHHHHHH
Confidence 3457888899999999889999999988666543 24555555444332223332 333444444555
Q ss_pred HHHhhccc--chhhhcchhhhhhhh
Q 024023 250 EIWEGEGE--QLEQVIQPAAVETAV 272 (274)
Q Consensus 250 ~~~~~~~~--~~~~~~~~~~~~~~~ 272 (274)
+.+..... -.....|...-++|.
T Consensus 100 ~~~~~~~~~~~~~~~r~a~~p~ga~ 124 (170)
T cd00885 100 ARFARRGREMTEANLKQAMLPEGAT 124 (170)
T ss_pred HHHHhcCCccChhhhheecCCCCCE
Confidence 55544332 122344555445444
No 276
>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=39.73 E-value=57 Score=29.44 Aligned_cols=80 Identities=14% Similarity=0.127 Sum_probs=57.3
Q ss_pred CCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCC
Q 024023 106 KPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 183 (274)
Q Consensus 106 ~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp 183 (274)
..-||+.-+|..++ +.+++.|+...-.+..+++.++-.+|+..-+..+.... ..
T Consensus 214 ~kRPgvD~FL~~~a~~yEIVi~sse~gmt~~pl~d~lDP~g~IsYkLfr~~t~y------------------------~~ 269 (393)
T KOG2832|consen 214 KKRPGVDYFLGHLAKYYEIVVYSSEQGMTVFPLLDALDPKGYISYKLFRGATKY------------------------EE 269 (393)
T ss_pred ccCchHHHHHHhhcccceEEEEecCCccchhhhHhhcCCcceEEEEEecCcccc------------------------cC
Confidence 34589999999996 78999999888888889999877777776555442211 10
Q ss_pred CHHHHHHHHHHhCCCCCeEEEEcCChhc
Q 024023 184 SLEAIETAIRIANVDPKKTIFFDDSARN 211 (274)
Q Consensus 184 ~~~~~~~~l~~~g~~~~~~i~VGDs~~D 211 (274)
+.- -.=+.+++-++.++++|+=..|-
T Consensus 270 -G~H-vKdls~LNRdl~kVivVd~d~~~ 295 (393)
T KOG2832|consen 270 -GHH-VKDLSKLNRDLQKVIVVDFDANS 295 (393)
T ss_pred -ccc-hhhhhhhccccceeEEEEccccc
Confidence 011 12377889999999999766653
No 277
>TIGR00877 purD phosphoribosylamine--glycine ligase. This enzyme appears as a monofunctional protein in prokaryotes but as part of a larger, multidomain protein in eukaryotes.
Probab=38.80 E-value=3.1e+02 Score=25.04 Aligned_cols=69 Identities=12% Similarity=0.132 Sum_probs=47.0
Q ss_pred HHHHHHHHHHhCCCCCeEEEEcCChhc-HHHHHHcCCe-EEEECCCCCCCCccccccCHhHHHHHHHHHHhh
Q 024023 185 LEAIETAIRIANVDPKKTIFFDDSARN-IASAKAAGLH-TVIVGSSVPVPPADHALNSIHNIKEAIPEIWEG 254 (274)
Q Consensus 185 ~~~~~~~l~~~g~~~~~~i~VGDs~~D-i~~a~~~G~~-~v~v~~~~~~~~a~~~~~~l~~l~~~l~~~~~~ 254 (274)
....+.+++++|++......+.+ ..| ...+...|.+ .+.-+........-.++.+.+++...+..+...
T Consensus 105 K~~~k~~l~~~gIp~p~~~~~~~-~~~~~~~~~~~g~P~~VvKp~~~~gg~Gv~~v~~~~el~~~~~~~~~~ 175 (423)
T TIGR00877 105 KAFAKDFMKRYGIPTAEYEVFTD-PEEALSYIQEKGAPAIVVKADGLAAGKGVIVAKTNEEAIKAVEEILEQ 175 (423)
T ss_pred HHHHHHHHHHCCCCCCCeEEECC-HHHHHHHHHhcCCCeEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHH
Confidence 45677889999998777666654 444 3455677888 665544333334557789999998888777643
No 278
>PRK10976 putative hydrolase; Provisional
Probab=38.41 E-value=64 Score=27.28 Aligned_cols=39 Identities=10% Similarity=0.122 Sum_probs=30.5
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLED 144 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~ 144 (274)
.+.+...+.|+++ |.+++++|+.+...+...++.+++..
T Consensus 19 ~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 60 (266)
T PRK10976 19 TLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKS 60 (266)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCC
Confidence 3445566666665 68999999999999999999988753
No 279
>smart00475 53EXOc 5'-3' exonuclease.
Probab=38.29 E-value=7.2 Score=33.51 Aligned_cols=108 Identities=15% Similarity=0.169 Sum_probs=51.4
Q ss_pred hhHHHHHHhCCCcEEEEeCCChHHHHH-HHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHH
Q 024023 109 PVLRNLLLSMPQRKIIFTNADQKHAME-VLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEA 187 (274)
Q Consensus 109 ~~~~~~L~~l~~~~~i~s~~~~~~~~~-~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~ 187 (274)
+-+.++|+.++++.+..-+..-+.+-. +..+....++-..|++.|. ... ++.+. ............+...-.
T Consensus 87 ~~~~~~l~~~gi~~i~~~g~EADD~iatla~~~~~~g~~~~IvS~Dk-Dl~----ql~~~--~v~~~~~~~~~~~~~~~~ 159 (259)
T smart00475 87 PLIKELLDALGIPVLEVEGYEADDVIATLAKKAEAEGYEVRIVSGDK-DLL----QLVSD--KVSVLDPTKGIKEFELYT 159 (259)
T ss_pred HHHHHHHHHCCCCEEeeCCcCHHHHHHHHHHHHHhCCCeEEEEeCCC-cHh----hcCCC--CEEEEeccCCCCccEEEc
Confidence 567778888888887777744444433 3333222222223444442 111 11110 000000000000111123
Q ss_pred HHHHHHHhCCCCCe----EEEEcCChhcHHHHHHcCCeEE
Q 024023 188 IETAIRIANVDPKK----TIFFDDSARNIASAKAAGLHTV 223 (274)
Q Consensus 188 ~~~~l~~~g~~~~~----~i~VGDs~~Di~~a~~~G~~~v 223 (274)
.+.+.+++|+.|++ ...+||+--.+......|-+++
T Consensus 160 ~~~v~~~~Gv~p~q~~d~~aL~GD~sDnipGV~GIG~KtA 199 (259)
T smart00475 160 PENVIEKYGLTPEQIIDYKALMGDSSDNIPGVPGIGEKTA 199 (259)
T ss_pred HHHHHHHhCcCHHHHHHHHHHhCCcccCCCCCCCCCHHHH
Confidence 45567889999877 4467877766665555554443
No 280
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=37.93 E-value=69 Score=28.20 Aligned_cols=39 Identities=13% Similarity=0.159 Sum_probs=30.5
Q ss_pred CChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCCc
Q 024023 107 PDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDC 145 (274)
Q Consensus 107 ~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~~ 145 (274)
..+.+.+.|++| ++++++.|+.+...+..+.+.+++.++
T Consensus 19 ~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p 60 (302)
T PRK12702 19 SYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHP 60 (302)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCe
Confidence 344555655555 699999999999999999999998643
No 281
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=37.61 E-value=1.7e+02 Score=25.75 Aligned_cols=83 Identities=17% Similarity=0.185 Sum_probs=50.9
Q ss_pred CCCChhHHHHHHhC-------CCcEEEEeCCC---hHHHHHHH-HHcCCCCccceeEecccCCCCCCCCCCCCccccccc
Q 024023 105 LKPDPVLRNLLLSM-------PQRKIIFTNAD---QKHAMEVL-GRLGLEDCFEGIICFETINPRLQPADNTDGIENNSF 173 (274)
Q Consensus 105 ~~~~~~~~~~L~~l-------~~~~~i~s~~~---~~~~~~~l-~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~ 173 (274)
-.++|++.++++.| +.++.++||.. .......+ +.+|+.--.+.++++-
T Consensus 15 ~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~~~~~i~~s~-------------------- 74 (321)
T TIGR01456 15 KKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDVSPLQVIQSH-------------------- 74 (321)
T ss_pred ccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCCCHHHHHhhh--------------------
Confidence 34578888666554 45688999875 44444444 7888763334444431
Q ss_pred CcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEE
Q 024023 174 SSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTV 223 (274)
Q Consensus 174 ~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v 223 (274)
......+++++ ..+++||.+- -.+.++.+|+..+
T Consensus 75 ------------~~~~~ll~~~~---~~v~viG~~~-~~~~l~~~G~~~v 108 (321)
T TIGR01456 75 ------------SPYKSLVNKYE---KRILAVGTGS-VRGVAEGYGFQNV 108 (321)
T ss_pred ------------HHHHHHHHHcC---CceEEEeChH-HHHHHHHcCCccc
Confidence 13455555543 2578888764 4667778887765
No 282
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=37.51 E-value=80 Score=26.62 Aligned_cols=31 Identities=23% Similarity=0.152 Sum_probs=25.6
Q ss_pred HHHHhCCCcEEEEeCCChHHHHHHHHHcCCC
Q 024023 113 NLLLSMPQRKIIFTNADQKHAMEVLGRLGLE 143 (274)
Q Consensus 113 ~~L~~l~~~~~i~s~~~~~~~~~~l~~~gl~ 143 (274)
..++..|.+++++|+.+...+...++.+|+.
T Consensus 26 ~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~ 56 (256)
T TIGR01486 26 ERLQELGIPVIPCTSKTAAEVEYLRKELGLE 56 (256)
T ss_pred HHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 3345567899999999999999999999875
No 283
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=36.74 E-value=95 Score=26.47 Aligned_cols=36 Identities=14% Similarity=0.142 Sum_probs=29.0
Q ss_pred ChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCC
Q 024023 108 DPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLE 143 (274)
Q Consensus 108 ~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~ 143 (274)
.+...+.|+++ |.+++++|+.+...+...++.+|+.
T Consensus 26 ~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 26 WQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred cHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence 34555666555 6999999999999999999999875
No 284
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=36.49 E-value=77 Score=27.02 Aligned_cols=63 Identities=16% Similarity=0.339 Sum_probs=43.3
Q ss_pred HHHHHHHHHHhCCCCCeEEEE---cCC--hhcHHHHHHcCCeEEEECCCCCCCCccccccCHhHHHHHHHHH
Q 024023 185 LEAIETAIRIANVDPKKTIFF---DDS--ARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEI 251 (274)
Q Consensus 185 ~~~~~~~l~~~g~~~~~~i~V---GDs--~~Di~~a~~~G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~~~ 251 (274)
.+.=..++++++++ ++.- |.+ ..=+.+|+.+|++.+.+..+.. .....++.+++++.+.+.+.
T Consensus 179 ~e~n~aL~~~~~i~---~lVtK~SG~~g~~eKi~AA~~lgi~vivI~RP~~-~~~~~~~~~~~e~~~~l~~~ 246 (248)
T PRK08057 179 LELERALLRQHRID---VVVTKNSGGAGTEAKLEAARELGIPVVMIARPAL-PYADREFEDVAELVAWLRHL 246 (248)
T ss_pred HHHHHHHHHHcCCC---EEEEcCCCchhhHHHHHHHHHcCCeEEEEeCCCC-CCCCcccCCHHHHHHHHHHh
Confidence 34445667778875 3433 442 2338999999999999988753 22336688999999888764
No 285
>PF01993 MTD: methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase; InterPro: IPR002844 This archaeal enzyme family is involved in formation of methane from carbon dioxide 1.5.99.9 from EC. The enzyme requires coenzyme F420 [].; GO: 0008901 ferredoxin hydrogenase activity, 0015948 methanogenesis, 0055114 oxidation-reduction process; PDB: 1U6I_D 3IQF_G 1QV9_C 3IQE_F 1U6J_G 3IQZ_D 1U6K_B.
Probab=36.07 E-value=91 Score=26.53 Aligned_cols=43 Identities=14% Similarity=0.280 Sum_probs=35.1
Q ss_pred CCCHHHHHHHHHHhCCCCCeEEEEcCCh--hcHHHHHHcCCeEEEECC
Q 024023 182 KPSLEAIETAIRIANVDPKKTIFFDDSA--RNIASAKAAGLHTVIVGS 227 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~~i~VGDs~--~Di~~a~~~G~~~v~v~~ 227 (274)
.|.|..-++++...|++ |+.|||.+ .+-....+.|++.+.+..
T Consensus 72 ~PGP~~ARE~l~~~~iP---~IvI~D~p~~k~kd~l~~~g~GYIivk~ 116 (276)
T PF01993_consen 72 APGPTKAREMLSAKGIP---CIVISDAPTKKAKDALEEEGFGYIIVKA 116 (276)
T ss_dssp SHHHHHHHHHHHHSSS----EEEEEEGGGGGGHHHHHHTT-EEEEETT
T ss_pred CCCcHHHHHHHHhCCCC---EEEEcCCCchhhHHHHHhcCCcEEEEec
Confidence 78888899999888865 89999999 367888999999998854
No 286
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=35.01 E-value=70 Score=26.99 Aligned_cols=39 Identities=18% Similarity=0.094 Sum_probs=30.2
Q ss_pred CCChhHHHHHHhC---CCcEEEEeCCChHHHHHHHHHcCCCC
Q 024023 106 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLED 144 (274)
Q Consensus 106 ~~~~~~~~~L~~l---~~~~~i~s~~~~~~~~~~l~~~gl~~ 144 (274)
.+.|...+.|+++ |.+++++|+.+...+...++.+++..
T Consensus 20 ~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 61 (272)
T PRK10530 20 TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALDT 61 (272)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCC
Confidence 3445566666655 68999999999999999999988753
No 287
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=34.67 E-value=96 Score=25.28 Aligned_cols=37 Identities=8% Similarity=0.049 Sum_probs=29.1
Q ss_pred CChhHHHHHHh---CCCcEEEEeCCChHHHHHHHHHcCCC
Q 024023 107 PDPVLRNLLLS---MPQRKIIFTNADQKHAMEVLGRLGLE 143 (274)
Q Consensus 107 ~~~~~~~~L~~---l~~~~~i~s~~~~~~~~~~l~~~gl~ 143 (274)
+.+...+.|+. .|++++++|+.+...+..+++.+|+.
T Consensus 16 i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~ 55 (225)
T TIGR01482 16 INESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTP 55 (225)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC
Confidence 44555666666 57899999999999999999888864
No 288
>PF10113 Fibrillarin_2: Fibrillarin-like archaeal protein; InterPro: IPR016760 Members of this protein family are HmdC, whose gene regularly occurs in the context of genes for HmdA (5,10-methenyltetrahydromethanopterin hydrogenase) and the radical SAM protein HmdB involved in biosynthesis of the HmdA cofactor. Bioinformatics suggests this protein, a homologue of eukaryotic fibrillarin, may be involved in biosynthesis of the guanylyl pyridinol cofactor in HmdA.
Probab=34.27 E-value=99 Score=28.55 Aligned_cols=44 Identities=9% Similarity=0.204 Sum_probs=32.7
Q ss_pred HHHHHHHHHHhCCCCCeEEEEcCChhcH----HHHHHcCCeEEEECCC
Q 024023 185 LEAIETAIRIANVDPKKTIFFDDSARNI----ASAKAAGLHTVIVGSS 228 (274)
Q Consensus 185 ~~~~~~~l~~~g~~~~~~i~VGDs~~Di----~~a~~~G~~~v~v~~~ 228 (274)
.+-+..+.+++|--.+-+++|||++-|+ .++.+.|+..+.+..+
T Consensus 208 ~~~Va~~Akk~gkGveaI~~vGDGyddLI~G~~a~id~~vDvfVvEGg 255 (505)
T PF10113_consen 208 MEEVAELAKKYGKGVEAIMHVGDGYDDLITGLKACIDMGVDVFVVEGG 255 (505)
T ss_pred HHHHHHHHHHhCCCceEEEEecCChHHHHHHHHHHHhcCCcEEEEeCC
Confidence 3456678899999889999999999884 4555567776666443
No 289
>COG1058 CinA Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]
Probab=32.15 E-value=2.1e+02 Score=24.55 Aligned_cols=47 Identities=15% Similarity=0.144 Sum_probs=34.4
Q ss_pred CCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHc---CCeEEEECCC
Q 024023 182 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA---GLHTVIVGSS 228 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~---G~~~v~v~~~ 228 (274)
-.+...+...|..+|++..+...|||...+|..+-.. -...+.+..|
T Consensus 20 dtNa~~la~~L~~~G~~v~~~~~VgD~~~~I~~~l~~a~~r~D~vI~tGG 69 (255)
T COG1058 20 DTNAAFLADELTELGVDLARITTVGDNPDRIVEALREASERADVVITTGG 69 (255)
T ss_pred cchHHHHHHHHHhcCceEEEEEecCCCHHHHHHHHHHHHhCCCEEEECCC
Confidence 3457788899999999999999999999886544332 2555555443
No 290
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=31.36 E-value=74 Score=25.72 Aligned_cols=78 Identities=13% Similarity=0.068 Sum_probs=32.9
Q ss_pred CCCCChhHHHHHHhCCCcEEEEeCCChHHHHHHHHHc-----CCCCccceeEecccCCCCCCCCCCCCcccccccCcccc
Q 024023 104 KLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRL-----GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR 178 (274)
Q Consensus 104 ~~~~~~~~~~~L~~l~~~~~i~s~~~~~~~~~~l~~~-----gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (274)
..++.|++...++..+.+++++.+.-...-......+ .+...||.|++.++
T Consensus 103 EtElWPnll~~a~~~~ip~~LvNarls~~s~~~~~~~~~~~r~~l~~f~~i~aqs~------------------------ 158 (186)
T PF04413_consen 103 ETELWPNLLREAKRRGIPVVLVNARLSERSFRRYRRFPFLFRPLLSRFDRILAQSE------------------------ 158 (186)
T ss_dssp S----HHHHHH-----S-EEEEEE--------------HHHHHHGGG-SEEEESSH------------------------
T ss_pred ccccCHHHHHHHhhcCCCEEEEeeeeccccchhhhhhHHHHHHHHHhCCEEEECCH------------------------
Confidence 4567788888888888999888764332211111111 12355788877653
Q ss_pred cCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHH
Q 024023 179 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIA 213 (274)
Q Consensus 179 ~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~ 213 (274)
.-.+-+.++|..++++...||-.-|..
T Consensus 159 --------~da~r~~~lG~~~~~v~v~GnlKfd~~ 185 (186)
T PF04413_consen 159 --------ADAERFRKLGAPPERVHVTGNLKFDQA 185 (186)
T ss_dssp --------HHHHHHHTTT-S--SEEE---GGG---
T ss_pred --------HHHHHHHHcCCCcceEEEeCcchhccc
Confidence 335667788999999999999877753
No 291
>PF05690 ThiG: Thiazole biosynthesis protein ThiG; InterPro: IPR008867 This family consists of several bacterial thiazole biosynthesis protein G sequences. ThiG, together with ThiF and ThiH, is proposed to be involved in the synthesis of 4-methyl-5-(b-hydroxyethyl)thiazole (THZ) which is an intermediate in the thiazole production pathway [].; GO: 0009228 thiamine biosynthetic process; PDB: 1WV2_B 1TYG_C 1XM3_B 2HTM_C 2YZR_C.
Probab=31.28 E-value=3.3e+02 Score=23.18 Aligned_cols=98 Identities=16% Similarity=0.100 Sum_probs=58.1
Q ss_pred CCCCCChhHHHHHHhC------CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcc
Q 024023 103 EKLKPDPVLRNLLLSM------PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSN 176 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l------~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (274)
....++|+..++++.. |+.+.-.++.+.-.++ .|+..|.. -..--+..++..
T Consensus 101 D~~~L~PD~~etl~Aae~Lv~eGF~VlPY~~~D~v~ak-rL~d~Gca---avMPlgsPIGSg------------------ 158 (247)
T PF05690_consen 101 DDKTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAK-RLEDAGCA---AVMPLGSPIGSG------------------ 158 (247)
T ss_dssp -TTT--B-HHHHHHHHHHHHHTT-EEEEEE-S-HHHHH-HHHHTT-S---EBEEBSSSTTT-------------------
T ss_pred CCCCcCCChhHHHHHHHHHHHCCCEEeecCCCCHHHHH-HHHHCCCC---EEEecccccccC------------------
Confidence 3446678877777655 5777777777766555 45555653 122223344433
Q ss_pred cccCCCCCHHHHHHHHHHhCCCCCeEEEEcCCh---hcHHHHHHcCCeEEEECCCC
Q 024023 177 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSA---RNIASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 177 ~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~---~Di~~a~~~G~~~v~v~~~~ 229 (274)
+|--++..++.++++.+++ +.|+-+. +|...|-+.|+..+++++.-
T Consensus 159 ---~Gi~n~~~l~~i~~~~~vP----vIvDAGiG~pSdaa~AMElG~daVLvNTAi 207 (247)
T PF05690_consen 159 ---RGIQNPYNLRIIIERADVP----VIVDAGIGTPSDAAQAMELGADAVLVNTAI 207 (247)
T ss_dssp -----SSTHHHHHHHHHHGSSS----BEEES---SHHHHHHHHHTT-SEEEESHHH
T ss_pred ---cCCCCHHHHHHHHHhcCCc----EEEeCCCCCHHHHHHHHHcCCceeehhhHH
Confidence 3577789999999999774 4555554 79999999999999998744
No 292
>PRK05294 carB carbamoyl phosphate synthase large subunit; Reviewed
Probab=31.20 E-value=4.5e+02 Score=27.63 Aligned_cols=69 Identities=10% Similarity=0.022 Sum_probs=48.9
Q ss_pred HHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCCccccccCHhHHHHHHHHHHh
Q 024023 185 LEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWE 253 (274)
Q Consensus 185 ~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~~~~~ 253 (274)
...+..+++++|++-.....+.+...-...+...|.+.+.=+........-.++.+.++|..++.....
T Consensus 670 K~~~~~~L~~~GIp~P~~~~~~s~ee~~~~~~~igyPvvVKP~~~~Gg~Gv~iv~~~eeL~~~~~~a~~ 738 (1066)
T PRK05294 670 RERFSKLLEKLGIPQPPNGTATSVEEALEVAEEIGYPVLVRPSYVLGGRAMEIVYDEEELERYMREAVK 738 (1066)
T ss_pred HHHHHHHHHHcCcCCCCeEEECCHHHHHHHHHhcCCCeEEEeCCCCCCCcEEEECCHHHHHHHHHHHHh
Confidence 346788999999987777777654433455677898877655433344556788999999998887664
No 293
>PRK13789 phosphoribosylamine--glycine ligase; Provisional
Probab=30.81 E-value=4.3e+02 Score=24.39 Aligned_cols=69 Identities=13% Similarity=0.147 Sum_probs=47.5
Q ss_pred HHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCCccccccCHhHHHHHHHHHHh
Q 024023 185 LEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWE 253 (274)
Q Consensus 185 ~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~~~~~ 253 (274)
....+.+++++|++-.....+.|-..-...++..|.+.+.-+.+.....--.++.+.+++..++..++.
T Consensus 109 K~~~K~~l~~~gIpt~~~~~~~~~~ea~~~~~~~~~PvVVKp~~~~~gkGV~vv~~~eel~~a~~~~~~ 177 (426)
T PRK13789 109 KHFAKSLMKEAKIPTASYKTFTEYSSSLSYLESEMLPIVIKADGLAAGKGVTVATEKKMAKRALKEIFK 177 (426)
T ss_pred HHHHHHHHHHcCCCCCCeEeeCCHHHHHHHHHhcCCCEEEEeCCCCCCCcEEEECCHHHHHHHHHHHHh
Confidence 356678889999976655555443222344566788888766555444556788999999999988863
No 294
>COG1494 GlpX Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins [Carbohydrate transport and metabolism]
Probab=30.62 E-value=2.5e+02 Score=24.68 Aligned_cols=70 Identities=16% Similarity=0.155 Sum_probs=52.2
Q ss_pred CCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCe-EEEEcCCh-hc--HHHHHHcCCeEEEECCCC
Q 024023 160 QPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKK-TIFFDDSA-RN--IASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~-~i~VGDs~-~D--i~~a~~~G~~~v~v~~~~ 229 (274)
-||-.++.+-.+-.-++-....+|-.+.++.+.+.+|.+.++ ++.|=|.+ ++ |...+++|...-.++.|.
T Consensus 115 APD~YM~Ki~VgP~a~g~IDl~~p~~~Nl~~vAkalgk~~~dl~vvildrpRH~~lI~~ir~~GarV~li~DGD 188 (332)
T COG1494 115 APDMYMEKIAVGPEAKGVIDLDAPLADNLRAVAKALGKSLSDLTVVILDRPRHAELIAEIRAAGARVRLIPDGD 188 (332)
T ss_pred CchhhhhheeeCccccceeecCCCHHHHHHHHHHHhCCCHHHeEEEEecCchHHHHHHHHHHhCCEEEEecCcc
Confidence 344445555444444555666799999999999999999877 45668888 44 888999999988887766
No 295
>TIGR03674 fen_arch flap structure-specific endonuclease. Endonuclease that cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Has 5'-endo-/exonuclease and 5'-pseudo-Y-endonuclease activities. Cleaves the junction between single and double-stranded regions of flap DNA
Probab=30.35 E-value=15 Score=32.85 Aligned_cols=99 Identities=14% Similarity=0.112 Sum_probs=52.9
Q ss_pred CChhHHHHHHhCCCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccc--cCcccccCC---
Q 024023 107 PDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNS--FSSNQRILC--- 181 (274)
Q Consensus 107 ~~~~~~~~L~~l~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--- 181 (274)
.++.+.++|+.+|++.+.+-+.. +..-..+...| ..|.|++.|..- +..++ ...+....+
T Consensus 131 ~~~~~k~lL~~~Gip~i~AP~EA-eaq~a~L~~~g---~vd~v~S~D~D~-----------l~fg~~~vi~~~~~~~~~~ 195 (338)
T TIGR03674 131 IVESSKKLLDLMGIPYVQAPSEG-EAQAAYMAKKG---DVDYVGSQDYDS-----------LLFGAPRLVRNLTISGKRK 195 (338)
T ss_pred HHHHHHHHHHHcCCeEEECCccH-HHHHHHHHHCC---CeeEEecCCcCe-----------eeecCCEEEEecccccccC
Confidence 35678888888899988877733 33333444444 456776655211 00000 000000001
Q ss_pred ----------CCCHHHHHHHHHHhCCCCCe----EEEEcCChhcHHHHHHcCCeE
Q 024023 182 ----------KPSLEAIETAIRIANVDPKK----TIFFDDSARNIASAKAAGLHT 222 (274)
Q Consensus 182 ----------kp~~~~~~~~l~~~g~~~~~----~i~VGDs~~Di~~a~~~G~~~ 222 (274)
.+..-....+++.+|+.+++ ++.+||+.| ...+..|.++
T Consensus 196 ~~~~~~~~~~~~e~~~~~~v~~~lgl~~~q~id~~iL~G~dyn--~Gv~GIG~kt 248 (338)
T TIGR03674 196 LPGKNIYVEVKPELIELEEVLSELGITREQLIDIAILVGTDYN--EGVKGIGPKT 248 (338)
T ss_pred CCcccccccccceeeeHHHHHHHhCCCHHHHHHHHHhcCCCCC--CCCCCccHHH
Confidence 11122456688999998876 677899666 3334444433
No 296
>cd06537 CIDE_N_B CIDE_N domain of CIDE-B proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45 and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=29.63 E-value=33 Score=23.76 Aligned_cols=16 Identities=19% Similarity=0.144 Sum_probs=13.2
Q ss_pred cEEEEecCCCccCCch
Q 024023 22 ECLLFDLDDTLYPLST 37 (274)
Q Consensus 22 k~viFDlDGTL~d~~~ 37 (274)
-.++++-|||.+|++.
T Consensus 40 ~~lvLeeDGT~Vd~Ee 55 (81)
T cd06537 40 LTLVLEEDGTAVDSED 55 (81)
T ss_pred eEEEEecCCCEEccHH
Confidence 4699999999998444
No 297
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=29.44 E-value=79 Score=28.14 Aligned_cols=83 Identities=17% Similarity=0.208 Sum_probs=46.9
Q ss_pred CCChhHHHHHHhC-------CCcEEEEeCCChHHHH----HHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccC
Q 024023 106 KPDPVLRNLLLSM-------PQRKIIFTNADQKHAM----EVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFS 174 (274)
Q Consensus 106 ~~~~~~~~~L~~l-------~~~~~i~s~~~~~~~~----~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (274)
++.|++.+.|+.| +++.+++||+.-..-. .+-+.+|+.---|.++-+.
T Consensus 51 ~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~lS~~Lgv~Vs~dqviqSH--------------------- 109 (389)
T KOG1618|consen 51 RPIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQELSALLGVEVSADQVIQSH--------------------- 109 (389)
T ss_pred CCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHHHHhhCCccCHHHHHhhc---------------------
Confidence 5667777777766 3778999986543222 2223444432223333322
Q ss_pred cccccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEE
Q 024023 175 SNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVI 224 (274)
Q Consensus 175 ~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~ 224 (274)
..++... ....+.++++|++. -.+.|+..|++.|.
T Consensus 110 -----------sP~r~l~---~~~~k~vLv~G~~~-vr~vAegyGFk~Vv 144 (389)
T KOG1618|consen 110 -----------SPFRLLV---EYHYKRVLVVGQGS-VREVAEGYGFKNVV 144 (389)
T ss_pred -----------ChHHHHh---hhhhceEEEecCCc-HHHHhhccCcccee
Confidence 1344443 23447899999654 34567778887764
No 298
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=29.11 E-value=1.7e+02 Score=23.19 Aligned_cols=26 Identities=19% Similarity=0.285 Sum_probs=19.9
Q ss_pred EEEEcCChhcHHHHHHcCCeEEEECCC
Q 024023 202 TIFFDDSARNIASAKAAGLHTVIVGSS 228 (274)
Q Consensus 202 ~i~VGDs~~Di~~a~~~G~~~v~v~~~ 228 (274)
-++||++.. ...|+..|++++.+.++
T Consensus 127 ~viVGg~~~-~~~A~~~gl~~v~i~sg 152 (176)
T PF06506_consen 127 DVIVGGGVV-CRLARKLGLPGVLIESG 152 (176)
T ss_dssp -EEEESHHH-HHHHHHTTSEEEESS--
T ss_pred cEEECCHHH-HHHHHHcCCcEEEEEec
Confidence 368999875 68889999999988765
No 299
>cd06539 CIDE_N_A CIDE_N domain of CIDE-A proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45, and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, the CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=29.04 E-value=37 Score=23.38 Aligned_cols=16 Identities=19% Similarity=0.239 Sum_probs=13.1
Q ss_pred cEEEEecCCCccCCch
Q 024023 22 ECLLFDLDDTLYPLST 37 (274)
Q Consensus 22 k~viFDlDGTL~d~~~ 37 (274)
-.++++-|||.+|++.
T Consensus 41 ~~lvL~eDGT~Vd~Ee 56 (78)
T cd06539 41 VTLVLEEDGTVVDTEE 56 (78)
T ss_pred cEEEEeCCCCEEccHH
Confidence 4689999999998444
No 300
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=29.04 E-value=1.2e+02 Score=27.19 Aligned_cols=81 Identities=9% Similarity=0.131 Sum_probs=45.4
Q ss_pred EEEEeCCC--hHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCH---HHHHHHHHHhC
Q 024023 122 KIIFTNAD--QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSL---EAIETAIRIAN 196 (274)
Q Consensus 122 ~~i~s~~~--~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~---~~~~~~l~~~g 196 (274)
.+|+|+.. ..+-..+.+.+++ ...+..+..++ ... .+--. ..+..++++
T Consensus 12 ~li~tG~H~~~~~g~~~~~~f~i-~~~~~~l~~~~-~~~----------------------~~~~~~~~~~~~~~~~~-- 65 (346)
T PF02350_consen 12 ILIVTGQHLDPEMGDTFFEGFGI-PKPDYLLDSDS-QSM----------------------AKSTGLAIIELADVLER-- 65 (346)
T ss_dssp EEEEECSS--CHHHHHHHHHTT---SEEEE--STT-S-H----------------------HHHHHHHHHHHHHHHHH--
T ss_pred EEEEeCCCCCHHHHHHHHhhCCC-CCCCccccccc-chH----------------------HHHHHHHHHHHHHHHHh--
Confidence 46778877 7788888887777 55666666443 210 01111 122233333
Q ss_pred CCCCeEEEEcCChhcH---HHHHHcCCeEEEECCC
Q 024023 197 VDPKKTIFFDDSARNI---ASAKAAGLHTVIVGSS 228 (274)
Q Consensus 197 ~~~~~~i~VGDs~~Di---~~a~~~G~~~v~v~~~ 228 (274)
.+|+=+++.||+..=+ .+|...+++++.+..|
T Consensus 66 ~~Pd~Vlv~GD~~~~la~alaA~~~~ipv~HieaG 100 (346)
T PF02350_consen 66 EKPDAVLVLGDRNEALAAALAAFYLNIPVAHIEAG 100 (346)
T ss_dssp HT-SEEEEETTSHHHHHHHHHHHHTT-EEEEES--
T ss_pred cCCCEEEEEcCCchHHHHHHHHHHhCCCEEEecCC
Confidence 3788899999999654 4556679999999877
No 301
>PRK14976 5'-3' exonuclease; Provisional
Probab=28.84 E-value=14 Score=32.19 Aligned_cols=107 Identities=13% Similarity=0.118 Sum_probs=53.0
Q ss_pred ChhHHHHHHhCCCcEEEEeCCChHHHH-HHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCC-CCH
Q 024023 108 DPVLRNLLLSMPQRKIIFTNADQKHAM-EVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK-PSL 185 (274)
Q Consensus 108 ~~~~~~~L~~l~~~~~i~s~~~~~~~~-~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k-p~~ 185 (274)
.+.+.++++.+|++.+..-+..-+.+- .+..+..-.+ .+.++.+.|-... ++.+.. ...... ..+. ...
T Consensus 92 ~~~i~~~l~~~gi~~~~~~g~EADDviatla~~~~~~g-~~v~IvS~DkDl~----ql~~~~--v~~~~~--~~~~~~~~ 162 (281)
T PRK14976 92 IPLLKKILKLAGIKWEEQPGYEADDLIGSLAKKLSKQN-ITVLIYSSDKDLL----QLVNEN--TDVLLK--KKGTSHFI 162 (281)
T ss_pred HHHHHHHHHHCCCCEEecCCcCHHHHHHHHHHHHHHCC-CeEEEEeCCCCcC----ccCCCC--eEEEEe--cCCCCcEE
Confidence 356677888889988888775544333 3333332211 2333333332211 111100 000000 0010 011
Q ss_pred HHHHHHHHHhCCCCCeE----EEEcCChhcHHHHHHcCCeEE
Q 024023 186 EAIETAIRIANVDPKKT----IFFDDSARNIASAKAAGLHTV 223 (274)
Q Consensus 186 ~~~~~~l~~~g~~~~~~----i~VGDs~~Di~~a~~~G~~~v 223 (274)
-....+.+++|+.|++. ..+||+--+|......|-+++
T Consensus 163 ~~~~~v~~~~gv~p~q~~d~~aL~GD~sDnipGVpGIG~KtA 204 (281)
T PRK14976 163 LNTNNFFELYGIEPKQIIDYKGLVGDSSDNIKGVKGIGPKTA 204 (281)
T ss_pred EcHHHHHHHhCcCHHHHHHHHHHhCCccCCCCCCCcccHHHH
Confidence 23456778899998773 467888777766655555544
No 302
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=28.52 E-value=2e+02 Score=28.41 Aligned_cols=111 Identities=11% Similarity=0.056 Sum_probs=62.5
Q ss_pred ChhHHHHHHh---CCCcEEEEeCCChHHHHHHHHHcCCCCc--c-ceeEecccCCCCCCCCCCCCcccccc-cCcccccC
Q 024023 108 DPVLRNLLLS---MPQRKIIFTNADQKHAMEVLGRLGLEDC--F-EGIICFETINPRLQPADNTDGIENNS-FSSNQRIL 180 (274)
Q Consensus 108 ~~~~~~~L~~---l~~~~~i~s~~~~~~~~~~l~~~gl~~~--f-d~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 180 (274)
..+..+.++. ||..+-++|+.......+--+++|+..- - ...++.+.. +++.+.+.-. ..+..- .
T Consensus 494 rhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~-------~~~~~~~v~elie~adg-f 565 (942)
T KOG0205|consen 494 RHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKD-------GSMPGSPVDELIEKADG-F 565 (942)
T ss_pred ccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCC-------CCCCCCcHHHHhhhccC-c
Confidence 3455555553 4788999999888888877777776521 1 112222100 1111111000 000000 0
Q ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEEC
Q 024023 181 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG 226 (274)
Q Consensus 181 ~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~ 226 (274)
..-.|+---.+.+++.-..-.|-+.||+.||..+.+.+.++.+..+
T Consensus 566 AgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~ 611 (942)
T KOG0205|consen 566 AGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVAD 611 (942)
T ss_pred cccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeecc
Confidence 1122444456666666666778899999999999999998876543
No 303
>smart00266 CAD Domains present in proteins implicated in post-mortem DNA fragmentation.
Probab=28.11 E-value=42 Score=22.86 Aligned_cols=16 Identities=19% Similarity=0.204 Sum_probs=13.0
Q ss_pred cEEEEecCCCccCCch
Q 024023 22 ECLLFDLDDTLYPLST 37 (274)
Q Consensus 22 k~viFDlDGTL~d~~~ 37 (274)
-.++++-|||.++++.
T Consensus 39 ~~l~L~eDGT~VddEe 54 (74)
T smart00266 39 VTLVLEEDGTIVDDEE 54 (74)
T ss_pred cEEEEecCCcEEccHH
Confidence 4688999999998444
No 304
>PRK12388 fructose-1,6-bisphosphatase II-like protein; Reviewed
Probab=28.03 E-value=4.3e+02 Score=23.47 Aligned_cols=66 Identities=15% Similarity=0.156 Sum_probs=47.8
Q ss_pred CCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCe-EEEEcCChh-c--HHHHHHcCCeEEEECCCC
Q 024023 164 NTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKK-TIFFDDSAR-N--IASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~-~i~VGDs~~-D--i~~a~~~G~~~v~v~~~~ 229 (274)
.++++-.+-..++......|-.+.++.+.+.+|.+.++ +++|=|.+. . |+..+++|...-+++.|.
T Consensus 118 YM~KiavGp~~~G~idl~~p~~~Nl~~vA~algk~v~dltV~vLdRpRH~~lI~eiR~~GarI~Li~DGD 187 (321)
T PRK12388 118 YMKKLVVNRLAAGAIDLSLPLADNLRNVARALGKPLDKLRMVTLDKPRLSAAIEEATQLGVKVFALPDGD 187 (321)
T ss_pred ceeeeeECcccCCeecCCCCHHHHHHHHHHHcCCChhHeEEEEEcCchHHHHHHHHHHcCCeEEEecccc
Confidence 33444433344445556688889999999999988876 567788883 2 888899999988887766
No 305
>PRK06524 biotin carboxylase-like protein; Validated
Probab=27.75 E-value=4.4e+02 Score=25.07 Aligned_cols=120 Identities=12% Similarity=0.001 Sum_probs=70.1
Q ss_pred CCCChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCC
Q 024023 105 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 182 (274)
Q Consensus 105 ~~~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 182 (274)
+.-+|.+.++++.-+ -+.+.++- ...+..+++.+|+.-.....-++.- -
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~fl~~--DG~iQ~lLE~lGIpy~gP~a~asai---------------------------~ 140 (493)
T PRK06524 90 LLRHPETLEFIKRRGPGGKACFVMF--DEETEALARQAGLEVMHPPAELRHR---------------------------L 140 (493)
T ss_pred hhcCHHHHHHHHhhCCCCceEEecC--CHHHHHHHHHCCCeEECcCHHHHHH---------------------------h
Confidence 345678888888775 33444443 3446667788887522222111110 1
Q ss_pred CCHHHHHHHHHHhCCCCCeEEEE-cCChhcHHH-HHH--cCCeEEEECCCCCCCCccccccCHhHHHHHHHHHHh
Q 024023 183 PSLEAIETAIRIANVDPKKTIFF-DDSARNIAS-AKA--AGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWE 253 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~~~~i~V-GDs~~Di~~-a~~--~G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~~~~~ 253 (274)
-+....+.+++..|++-.....+ -++..++.. +.. .|.+++.-+...........+.+-++|..+++.++.
T Consensus 141 mDK~~tK~l~~~aGIPtpp~~~~~~~~~eel~~~~~~~~IGyPvVVKP~~GGSS~GV~~Vkn~eELe~a~~~~~~ 215 (493)
T PRK06524 141 DSKIVTTRLANEAGVPSVPHVLGRVDSYDELSALAHGAGLGDDLVVQTPYGDSGSTTFFVRGQRDWDKYAGGIVG 215 (493)
T ss_pred CCHHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHhccCCCcEEEEECCCCCCcCEEEeCCHHHHHHHHHHhcC
Confidence 22345667888999965554443 233333332 333 788877655544445556788899999988887754
No 306
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=27.49 E-value=3.7e+02 Score=22.56 Aligned_cols=37 Identities=22% Similarity=0.267 Sum_probs=24.8
Q ss_pred CChhHHHHHHhCC---CcEEEEeCCChHHHHH---HHHHcCCC
Q 024023 107 PDPVLRNLLLSMP---QRKIIFTNADQKHAME---VLGRLGLE 143 (274)
Q Consensus 107 ~~~~~~~~L~~l~---~~~~i~s~~~~~~~~~---~l~~~gl~ 143 (274)
..||..+.|+.|+ .++-++||...+.-+. .|+++|+.
T Consensus 24 avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 24 AVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred cCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 4567777777774 6677899877665554 45556654
No 307
>PRK09479 glpX fructose 1,6-bisphosphatase II; Reviewed
Probab=27.44 E-value=4.1e+02 Score=23.59 Aligned_cols=66 Identities=17% Similarity=0.195 Sum_probs=48.0
Q ss_pred CCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCe-EEEEcCChh-c--HHHHHHcCCeEEEECCCC
Q 024023 164 NTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKK-TIFFDDSAR-N--IASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~-~i~VGDs~~-D--i~~a~~~G~~~v~v~~~~ 229 (274)
.++++-.+-.-++......|-.+.++.+.+.+|..+++ +++|=|.+. . |+..+++|...-+++.|.
T Consensus 121 YM~KiavGp~~~g~vdl~~p~~eNl~~~A~algk~v~dltV~vLdRpRH~~lI~eiR~~Gari~Li~DGD 190 (319)
T PRK09479 121 YMEKLAVGPEAKGVVDLDAPVAENLRAVAKALGKDVSDLTVVVLDRPRHEELIAEIREAGARVKLISDGD 190 (319)
T ss_pred ceeeeeeCcccCCeecCCCCHHHHHHHHHHHcCCChhHeEEEEEcCchHHHHHHHHHHcCCeEEEecccc
Confidence 34444444444455556688889999999999988876 567788883 2 888888999988887766
No 308
>PRK09423 gldA glycerol dehydrogenase; Provisional
Probab=27.29 E-value=4.6e+02 Score=23.54 Aligned_cols=46 Identities=26% Similarity=0.203 Sum_probs=30.9
Q ss_pred CCCHHHHHHHHHHhC-CCCCeEEEEcCCh-hcHHHHHH--cCCeEEEECC
Q 024023 182 KPSLEAIETAIRIAN-VDPKKTIFFDDSA-RNIASAKA--AGLHTVIVGS 227 (274)
Q Consensus 182 kp~~~~~~~~l~~~g-~~~~~~i~VGDs~-~Di~~a~~--~G~~~v~v~~ 227 (274)
.|..+.+..+.+.+. ..++-+|.||=+. .|+.-+-+ .|++.+.+++
T Consensus 67 ep~~~~v~~~~~~~~~~~~d~IIavGGGsv~D~aK~iA~~~~~p~i~IPT 116 (366)
T PRK09423 67 ECSDNEIDRLVAIAEENGCDVVIGIGGGKTLDTAKAVADYLGVPVVIVPT 116 (366)
T ss_pred CCCHHHHHHHHHHHHhcCCCEEEEecChHHHHHHHHHHHHcCCCEEEeCC
Confidence 455566667766653 3567788998776 78665544 3788888864
No 309
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=26.75 E-value=54 Score=27.41 Aligned_cols=42 Identities=19% Similarity=0.150 Sum_probs=26.9
Q ss_pred HHHHHhC--CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecc
Q 024023 112 RNLLLSM--PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFE 153 (274)
Q Consensus 112 ~~~L~~l--~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~ 153 (274)
.++|+.| +..++++|+++..-+...+..-.+...||.++..+
T Consensus 2 ~~~L~~L~~~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~en 45 (220)
T PF03332_consen 2 AELLQKLRKKVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPEN 45 (220)
T ss_dssp HHHHHHHHTTSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGG
T ss_pred HHHHHHHHhcCeEEEEcchhHHHHHHHHcccchHhhCCeeecCC
Confidence 4566666 48899999999887777764223335577776654
No 310
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=26.75 E-value=52 Score=21.95 Aligned_cols=23 Identities=26% Similarity=0.345 Sum_probs=16.0
Q ss_pred HHHHHHHHhCCCCCeEEEEcCCh
Q 024023 187 AIETAIRIANVDPKKTIFFDDSA 209 (274)
Q Consensus 187 ~~~~~l~~~g~~~~~~i~VGDs~ 209 (274)
++...|.+.|+..-++|.|||-.
T Consensus 44 Gv~~~L~~~G~~~GD~V~Ig~~e 66 (69)
T PF09269_consen 44 GVEKALRKAGAKEGDTVRIGDYE 66 (69)
T ss_dssp THHHHHHTTT--TT-EEEETTEE
T ss_pred CHHHHHHHcCCCCCCEEEEcCEE
Confidence 56777888899999999999853
No 311
>PF11071 DUF2872: Protein of unknown function (DUF2872); InterPro: IPR019884 This entry represents a family of uncharacterised proteins, including YtoQ from Bacillus subtilis. This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship.
Probab=26.65 E-value=1.8e+02 Score=22.28 Aligned_cols=67 Identities=10% Similarity=0.084 Sum_probs=42.2
Q ss_pred HHHHHHHHHhCCCCCeE--EEEcCChhc------HHHHHHcCCeEEEECCCCC-------CCCccccccCHhHHHHHHHH
Q 024023 186 EAIETAIRIANVDPKKT--IFFDDSARN------IASAKAAGLHTVIVGSSVP-------VPPADHALNSIHNIKEAIPE 250 (274)
Q Consensus 186 ~~~~~~l~~~g~~~~~~--i~VGDs~~D------i~~a~~~G~~~v~v~~~~~-------~~~a~~~~~~l~~l~~~l~~ 250 (274)
.-+..+..+..+...++ +-|||.+.- .-.|.+.|-+.|.+....- ...+..++++.++..++|++
T Consensus 59 a~iN~iRT~~li~~aDvVVvrFGekYKQWNaAfDAg~a~AlgKplI~lh~~~~~HpLKEvda~A~a~~et~~Qvv~iL~Y 138 (141)
T PF11071_consen 59 AKINAIRTRTLIEKADVVVVRFGEKYKQWNAAFDAGYAAALGKPLITLHPEELHHPLKEVDAAALAVAETPEQVVEILRY 138 (141)
T ss_pred hhhhHHHHHHHHhhCCEEEEEechHHHHHHHHhhHHHHHHcCCCeEEecchhccccHHHHhHhhHhhhCCHHHHHHHHHH
Confidence 34444555555554554 456998854 4444555656665544432 45678889999999999888
Q ss_pred HH
Q 024023 251 IW 252 (274)
Q Consensus 251 ~~ 252 (274)
++
T Consensus 139 v~ 140 (141)
T PF11071_consen 139 VL 140 (141)
T ss_pred Hh
Confidence 75
No 312
>PF02601 Exonuc_VII_L: Exonuclease VII, large subunit; InterPro: IPR020579 Exonuclease VII 3.1.11.6 from EC is composed of two nonidentical subunits; one large subunit and 4 small ones []. Exonuclease VII catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides. The large subunit also contains the OB-fold domains (IPR004365 from INTERPRO) that bind to nucleic acids at the N terminus. This entry represents Exonuclease VII, large subunit, C-terminal. ; GO: 0008855 exodeoxyribonuclease VII activity
Probab=26.47 E-value=63 Score=28.42 Aligned_cols=116 Identities=15% Similarity=0.167 Sum_probs=62.5
Q ss_pred CcEEEEeCCChHHHHHHHHHcCCCCc-cceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCC
Q 024023 120 QRKIIFTNADQKHAMEVLGRLGLEDC-FEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVD 198 (274)
Q Consensus 120 ~~~~i~s~~~~~~~~~~l~~~gl~~~-fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~ 198 (274)
.+++|+|+.+.....-++..+.-..+ ++.++....+. |...+.-+..++++.+-.
T Consensus 15 ~~I~vITs~~gAa~~D~~~~~~~r~~~~~~~~~p~~vQ------------------------G~~A~~~I~~al~~~~~~ 70 (319)
T PF02601_consen 15 KRIAVITSPTGAAIQDFLRTLKRRNPIVEIILYPASVQ------------------------GEGAAASIVSALRKANEM 70 (319)
T ss_pred CEEEEEeCCchHHHHHHHHHHHHhCCCcEEEEEecccc------------------------ccchHHHHHHHHHHHHhc
Confidence 67899999887777766665543332 44444433332 355666677777777543
Q ss_pred ----CCeEEEE---cCChhcHH------HHH---HcCCeEEEECCCCC-----------------CCCccccccCHhHHH
Q 024023 199 ----PKKTIFF---DDSARNIA------SAK---AAGLHTVIVGSSVP-----------------VPPADHALNSIHNIK 245 (274)
Q Consensus 199 ----~~~~i~V---GDs~~Di~------~a~---~~G~~~v~v~~~~~-----------------~~~a~~~~~~l~~l~ 245 (274)
.-+++.| |=|..|+- -|+ ++.++++ .+-|++ ...+.+++.+..++.
T Consensus 71 ~~~~~~Dviii~RGGGs~eDL~~FN~e~varai~~~~~Pvi-saIGHe~D~ti~D~vAd~ra~TPtaaAe~~~~~~~~~~ 149 (319)
T PF02601_consen 71 GQADDFDVIIIIRGGGSIEDLWAFNDEEVARAIAASPIPVI-SAIGHETDFTIADFVADLRAPTPTAAAELIVPDRRELL 149 (319)
T ss_pred cccccccEEEEecCCCChHHhcccChHHHHHHHHhCCCCEE-EecCCCCCchHHHHHHHhhCCCHHHHHHHHhhhHHHHH
Confidence 2456666 44434433 333 3555544 222332 234556666666666
Q ss_pred HHHHHHHhhcccchh
Q 024023 246 EAIPEIWEGEGEQLE 260 (274)
Q Consensus 246 ~~l~~~~~~~~~~~~ 260 (274)
..+..+...+....+
T Consensus 150 ~~l~~~~~~l~~~~~ 164 (319)
T PF02601_consen 150 QRLDELRQRLNRAMR 164 (319)
T ss_pred HHHHHHHHHHHHHHH
Confidence 655555544444333
No 313
>PRK00885 phosphoribosylamine--glycine ligase; Provisional
Probab=26.10 E-value=5.1e+02 Score=23.64 Aligned_cols=68 Identities=12% Similarity=0.099 Sum_probs=46.9
Q ss_pred HHHHHHHHHHhCCCCCeEEEEcCChhcH-HHHHHcCCeEEEECCCCCCCCccccccCHhHHHHHHHHHHh
Q 024023 185 LEAIETAIRIANVDPKKTIFFDDSARNI-ASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWE 253 (274)
Q Consensus 185 ~~~~~~~l~~~g~~~~~~i~VGDs~~Di-~~a~~~G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~~~~~ 253 (274)
....+.++++.|++......+.+ ..++ ..+...|.+.+.-+.......--.++.+.+++..++..++.
T Consensus 103 K~~~k~~l~~~gip~p~~~~~~~-~~~~~~~~~~~~~P~VvKP~~~~gs~Gv~~v~~~~el~~~~~~~~~ 171 (420)
T PRK00885 103 KAFAKDFMARYGIPTAAYETFTD-AEEALAYLDEKGAPIVVKADGLAAGKGVVVAMTLEEAKAAVDDMLA 171 (420)
T ss_pred HHHHHHHHHHcCCCCCCeEEeCC-HHHHHHHHHHcCCCEEEEeCCCCCCCcEEEeCCHHHHHHHHHHHhh
Confidence 34567889999997666666644 4443 44556788887665544444456778999999998888765
No 314
>CHL00162 thiG thiamin biosynthesis protein G; Validated
Probab=25.89 E-value=4.3e+02 Score=22.78 Aligned_cols=99 Identities=17% Similarity=0.132 Sum_probs=66.4
Q ss_pred CCCCCChhHHHHHHhC------CCcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcc
Q 024023 103 EKLKPDPVLRNLLLSM------PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSN 176 (274)
Q Consensus 103 ~~~~~~~~~~~~L~~l------~~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (274)
....++|+..++++.. |+.+.-.++.+...++ .|+..|... ..--+..++..
T Consensus 115 D~~~LlPD~~etl~Aae~Lv~eGF~VlPY~~~D~v~a~-rLed~Gc~a---VMPlgsPIGSg------------------ 172 (267)
T CHL00162 115 DPKYLLPDPIGTLKAAEFLVKKGFTVLPYINADPMLAK-HLEDIGCAT---VMPLGSPIGSG------------------ 172 (267)
T ss_pred CCcccCCChHHHHHHHHHHHHCCCEEeecCCCCHHHHH-HHHHcCCeE---EeeccCcccCC------------------
Confidence 3456778877777655 5777777777766555 455556531 22222233332
Q ss_pred cccCCCCCHHHHHHHHHHhCCCCCeEEEEcCCh---hcHHHHHHcCCeEEEECCCCC
Q 024023 177 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSA---RNIASAKAAGLHTVIVGSSVP 230 (274)
Q Consensus 177 ~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~---~Di~~a~~~G~~~v~v~~~~~ 230 (274)
+|-.++..++.+++...+ .+.+|-+. .|...|-+.|+..++++++-.
T Consensus 173 ---~Gl~n~~~l~~i~e~~~v----pVivdAGIgt~sDa~~AmElGaDgVL~nSaIa 222 (267)
T CHL00162 173 ---QGLQNLLNLQIIIENAKI----PVIIDAGIGTPSEASQAMELGASGVLLNTAVA 222 (267)
T ss_pred ---CCCCCHHHHHHHHHcCCC----cEEEeCCcCCHHHHHHHHHcCCCEEeecceee
Confidence 357788999999987554 36677665 699999999999999988764
No 315
>TIGR00237 xseA exodeoxyribonuclease VII, large subunit. This family consist of exodeoxyribonuclease VII, large subunit XseA which catalyses exonucleolytic cleavage in either the 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides. Exonuclease VII consists of one large subunit and four small subunits.
Probab=25.63 E-value=3.5e+02 Score=25.11 Aligned_cols=111 Identities=14% Similarity=0.179 Sum_probs=61.6
Q ss_pred CCcEEEEeCCChHHHHHHHHHcCCCC-ccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCC
Q 024023 119 PQRKIIFTNADQKHAMEVLGRLGLED-CFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANV 197 (274)
Q Consensus 119 ~~~~~i~s~~~~~~~~~~l~~~gl~~-~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~ 197 (274)
..++.|+|+.+-.....++..+.-.. .+..++..-.+. |...+.-+..+++.++-
T Consensus 129 p~~i~vits~~~aa~~D~~~~~~~r~p~~~~~~~~~~vQ------------------------G~~a~~~i~~al~~~~~ 184 (432)
T TIGR00237 129 PKRVGVITSQTGAALADILHILKRRDPSLKVVIYPTLVQ------------------------GEGAVQSIVESIELANT 184 (432)
T ss_pred CCEEEEEeCCccHHHHHHHHHHHhhCCCceEEEeccccc------------------------CccHHHHHHHHHHHhhc
Confidence 36799999988887777777665432 244443333222 35555666667776664
Q ss_pred CC-CeEEEE---cCChhcHHH------HHH---cCCeEEEECCCCC-----------------CCCccccccCHhHHHHH
Q 024023 198 DP-KKTIFF---DDSARNIAS------AKA---AGLHTVIVGSSVP-----------------VPPADHALNSIHNIKEA 247 (274)
Q Consensus 198 ~~-~~~i~V---GDs~~Di~~------a~~---~G~~~v~v~~~~~-----------------~~~a~~~~~~l~~l~~~ 247 (274)
.. -+++.| |=|..|+-+ |++ +.++.+- +-|++ .+.|.+++++..++...
T Consensus 185 ~~~~dviii~RGGGs~eDL~~Fn~e~~~rai~~~~~Pvis-~iGHe~D~ti~D~vAd~ra~TPtaaae~~~p~~~el~qr 263 (432)
T TIGR00237 185 KNECDVLIVGRGGGSLEDLWSFNDEKVARAIFLSKIPIIS-AVGHETDFTISDFVADLRAPTPSAAAEIVSPNQDELLQR 263 (432)
T ss_pred CCCCCEEEEecCCCCHHHhhhcCcHHHHHHHHcCCCCEEE-ecCcCCCccHHHHhhhccCCCcHHHHHHhCccHHHHHHH
Confidence 32 367777 444455433 332 4444442 22222 24466777777776665
Q ss_pred HHHHHhh
Q 024023 248 IPEIWEG 254 (274)
Q Consensus 248 l~~~~~~ 254 (274)
|..+...
T Consensus 264 Ld~l~~R 270 (432)
T TIGR00237 264 LDGFNVR 270 (432)
T ss_pred HHHHHHH
Confidence 5444433
No 316
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=25.33 E-value=3.9e+02 Score=23.63 Aligned_cols=83 Identities=13% Similarity=0.066 Sum_probs=46.0
Q ss_pred EEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHH---HHHHHHHHhCCC
Q 024023 122 KIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLE---AIETAIRIANVD 198 (274)
Q Consensus 122 ~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~---~~~~~l~~~g~~ 198 (274)
.+++|+.+......+++.+++...++..+....... .+--.. .+..++++ .+
T Consensus 32 ~~~~tg~h~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~l~~~l~~--~~ 86 (365)
T TIGR00236 32 YVIVTAQHREMLDQVLDLFHLPPDYDLNIMSPGQTL-----------------------GEITSNMLEGLEELLLE--EK 86 (365)
T ss_pred EEEEeCCCHHHHHHHHHhcCCCCCeeeecCCCCCCH-----------------------HHHHHHHHHHHHHHHHH--cC
Confidence 578888888777788777777632222222210000 011111 23333343 34
Q ss_pred CCeEEEEcCChhc---HHHHHHcCCeEEEECCCC
Q 024023 199 PKKTIFFDDSARN---IASAKAAGLHTVIVGSSV 229 (274)
Q Consensus 199 ~~~~i~VGDs~~D---i~~a~~~G~~~v~v~~~~ 229 (274)
|+=++..||...- ..+|+..|++.+.+..+.
T Consensus 87 pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~ 120 (365)
T TIGR00236 87 PDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGL 120 (365)
T ss_pred CCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCC
Confidence 6667777997653 445667899998775443
No 317
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=25.24 E-value=2e+02 Score=24.57 Aligned_cols=53 Identities=17% Similarity=0.219 Sum_probs=32.2
Q ss_pred CeEEEEcCChhc---HHHHHHcCCeEEEE-CCCCCCCCcccc-------ccCHhHHHHHHHHHH
Q 024023 200 KKTIFFDDSARN---IASAKAAGLHTVIV-GSSVPVPPADHA-------LNSIHNIKEAIPEIW 252 (274)
Q Consensus 200 ~~~i~VGDs~~D---i~~a~~~G~~~v~v-~~~~~~~~a~~~-------~~~l~~l~~~l~~~~ 252 (274)
.++++|=|-..| +.-|+..|++++.+ ++......-||+ +.++.=+...|....
T Consensus 157 Pd~l~ViDp~~e~iAv~EA~klgIPVvAlvDTn~dpd~VD~~IP~Ndda~rsi~Li~~~lA~ai 220 (252)
T COG0052 157 PDVLFVIDPRKEKIAVKEANKLGIPVVALVDTNCDPDGVDYVIPGNDDAIRSIALIYWLLARAI 220 (252)
T ss_pred CCEEEEeCCcHhHHHHHHHHHcCCCEEEEecCCCCCccCceeecCCChHHHHHHHHHHHHHHHH
Confidence 458888888766 77788899999875 443333344444 444444444444333
No 318
>PF02593 dTMP_synthase: Thymidylate synthase; InterPro: IPR003745 This entry describes proteins of unknown function.
Probab=25.08 E-value=1.5e+02 Score=24.86 Aligned_cols=92 Identities=13% Similarity=0.118 Sum_probs=58.7
Q ss_pred CCChhHHH-H---HHhCCCcEEEEeCCChH-----HHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcc
Q 024023 106 KPDPVLRN-L---LLSMPQRKIIFTNADQK-----HAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSN 176 (274)
Q Consensus 106 ~~~~~~~~-~---L~~l~~~~~i~s~~~~~-----~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (274)
.++|++.- + ++.-|.+.+|+...... .++..++.+|+.-.|...+|+-+
T Consensus 59 ~lHPDl~~~l~~~~~e~g~kavIvp~~~~~~g~~~~lk~~~e~~gi~~~~P~~~CsL~---------------------- 116 (217)
T PF02593_consen 59 GLHPDLTYELPEIAKEAGVKAVIVPSESPKPGLRRQLKKQLEEFGIEVEFPKPFCSLE---------------------- 116 (217)
T ss_pred ccCchhHHHHHHHHHHcCCCEEEEecCCCccchHHHHHHHHHhcCceeecCccccccC----------------------
Confidence 45676653 3 33346777778776666 78888889888777777777643
Q ss_pred cccCCCCCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEE
Q 024023 177 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVI 224 (274)
Q Consensus 177 ~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~ 224 (274)
+.+-..+...++.+|-+.=++..=+|...|++-.+.+-|++-|
T Consensus 117 -----~~~~p~i~~F~~~fGkP~~ei~v~~~~I~~V~VlR~aPCGsT~ 159 (217)
T PF02593_consen 117 -----ENGNPQIDEFAEYFGKPKVEIEVENGKIKDVKVLRSAPCGSTW 159 (217)
T ss_pred -----CCCChhHHHHHHHhCCceEEEEecCCcEEEEEEEecCCCccHH
Confidence 2223357777777886554444334455777776766665543
No 319
>cd01615 CIDE_N CIDE_N domain, found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins, as well as CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of ICAD/DFF45, and the CAD/DFF40 and CIDE nucleases during apoptosis. The CIDE-N domain is also found in the FSP27/CIDE-C protein.
Probab=24.91 E-value=47 Score=22.90 Aligned_cols=16 Identities=19% Similarity=0.088 Sum_probs=12.9
Q ss_pred cEEEEecCCCccCCch
Q 024023 22 ECLLFDLDDTLYPLST 37 (274)
Q Consensus 22 k~viFDlDGTL~d~~~ 37 (274)
-.++++-|||.++++.
T Consensus 41 ~~lvL~eDGTeVddEe 56 (78)
T cd01615 41 VTLVLEEDGTEVDDEE 56 (78)
T ss_pred eEEEEeCCCcEEccHH
Confidence 4589999999998443
No 320
>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]
Probab=24.64 E-value=2e+02 Score=25.77 Aligned_cols=76 Identities=17% Similarity=0.130 Sum_probs=49.0
Q ss_pred HHHHHHHHhCCCCCeEEEEcCChhc-HHHHHHcCCeEEEECCCCCCCCccccccCHhHHHHHHHHHHhhcccchhhhc
Q 024023 187 AIETAIRIANVDPKKTIFFDDSARN-IASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEGEGEQLEQVI 263 (274)
Q Consensus 187 ~~~~~l~~~g~~~~~~i~VGDs~~D-i~~a~~~G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~~~~~~~~~~~~~~~ 263 (274)
.-+.+.+++|++-+...| -|+..+ ..++.+.|.+++.-+--...-+-..++.+.+++....++.....+.....++
T Consensus 117 iRrlAAeeLglpTs~Y~f-a~s~~e~~~a~~~iGfPcvvKPvMSSSGkGqsvv~~~e~ve~AW~~A~~g~R~~~~RVI 193 (394)
T COG0027 117 IRRLAAEELGLPTSKYRF-ADSLEELRAAVEKIGFPCVVKPVMSSSGKGQSVVRSPEDVEKAWEYAQQGGRGGSGRVI 193 (394)
T ss_pred HHHHHHHHhCCCCccccc-cccHHHHHHHHHHcCCCeecccccccCCCCceeecCHHHHHHHHHHHHhcCCCCCCcEE
Confidence 344566889997665554 466655 5667778999885432222234556789999988877777665555444433
No 321
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=24.57 E-value=76 Score=21.14 Aligned_cols=23 Identities=26% Similarity=0.328 Sum_probs=19.4
Q ss_pred HHHHHHHHhCCCCCeEEEEcCCh
Q 024023 187 AIETAIRIANVDPKKTIFFDDSA 209 (274)
Q Consensus 187 ~~~~~l~~~g~~~~~~i~VGDs~ 209 (274)
++..+|.+.|+.+-++|.|||-.
T Consensus 44 Gv~~~L~~~G~~~GD~V~Ig~~e 66 (69)
T TIGR03595 44 GVEDALRKAGAKDGDTVRIGDFE 66 (69)
T ss_pred CHHHHHHHcCCCCCCEEEEccEE
Confidence 57788888999999999999853
No 322
>PF13911 AhpC-TSA_2: AhpC/TSA antioxidant enzyme
Probab=24.16 E-value=2.8e+02 Score=19.93 Aligned_cols=32 Identities=6% Similarity=0.042 Sum_probs=24.7
Q ss_pred HHHHHhCCCcEEEEeCCChHHHHHHHHHcCCC
Q 024023 112 RNLLLSMPQRKIIFTNADQKHAMEVLGRLGLE 143 (274)
Q Consensus 112 ~~~L~~l~~~~~i~s~~~~~~~~~~l~~~gl~ 143 (274)
...|+..+.++++|+.++...+....+..++.
T Consensus 6 ~~~l~~~gv~lv~I~~g~~~~~~~f~~~~~~p 37 (115)
T PF13911_consen 6 KPELEAAGVKLVVIGCGSPEGIEKFCELTGFP 37 (115)
T ss_pred HHHHHHcCCeEEEEEcCCHHHHHHHHhccCCC
Confidence 45677789999999999886688887765554
No 323
>cd06536 CIDE_N_ICAD CIDE_N domain of ICAD. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD (DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and release of active DFF40/CAD nuclease.
Probab=23.91 E-value=50 Score=22.89 Aligned_cols=16 Identities=19% Similarity=0.131 Sum_probs=12.9
Q ss_pred cEEEEecCCCccCCch
Q 024023 22 ECLLFDLDDTLYPLST 37 (274)
Q Consensus 22 k~viFDlDGTL~d~~~ 37 (274)
-.|+++-|||.++++.
T Consensus 43 ~~lvL~eDGT~VddEe 58 (80)
T cd06536 43 ITLVLAEDGTIVEDED 58 (80)
T ss_pred eEEEEecCCcEEccHH
Confidence 4688999999998444
No 324
>PRK09864 putative peptidase; Provisional
Probab=23.69 E-value=2e+02 Score=26.05 Aligned_cols=70 Identities=9% Similarity=0.027 Sum_probs=38.7
Q ss_pred HHHHHHHHHhCCCCCeEEEEcCChhcHHHHH--HcCCeEEEECCCCCCCCccc---cccCHhHHHHHHHHHHhhcc
Q 024023 186 EAIETAIRIANVDPKKTIFFDDSARNIASAK--AAGLHTVIVGSSVPVPPADH---ALNSIHNIKEAIPEIWEGEG 256 (274)
Q Consensus 186 ~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~--~~G~~~v~v~~~~~~~~a~~---~~~~l~~l~~~l~~~~~~~~ 256 (274)
+.+..++++.|++..-.+.-| +-+|-...+ ..|++++.+.-+.+=.+... -.+|++...++|..+...+.
T Consensus 268 ~~l~~~A~~~~Ip~Q~~~~~~-ggTDa~~i~~~~~Gvpt~~isiP~RY~Hs~~e~~~~~D~e~~~~Ll~~~~~~l~ 342 (356)
T PRK09864 268 AALKSCAAHNDLPLQFSTMKT-GATDGGRYNVMGGGRPVVALCLPTRYLHANSGMISKADYDALLTLIRDFLTTLT 342 (356)
T ss_pred HHHHHHHHHcCCCceEEEcCC-CCchHHHHHHhCCCCcEEEEeeccCcCCCcceEeEHHHHHHHHHHHHHHHHhcc
Confidence 456667788899876544442 245533333 36888877654443222222 34555555566666555543
No 325
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=23.68 E-value=40 Score=32.82 Aligned_cols=21 Identities=14% Similarity=0.213 Sum_probs=18.1
Q ss_pred EEEEcCChhcHHHHHHcCCeE
Q 024023 202 TIFFDDSARNIASAKAAGLHT 222 (274)
Q Consensus 202 ~i~VGDs~~Di~~a~~~G~~~ 222 (274)
...||+.++|+-.-+..|++.
T Consensus 653 YAgFGNR~TDviSY~~VgVP~ 673 (738)
T KOG2116|consen 653 YAGFGNRITDVISYRQVGVPL 673 (738)
T ss_pred eeecCCCcccceeeeeecCCc
Confidence 557899999999999999865
No 326
>cd00886 MogA_MoaB MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MogA, together with MoeA, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes. In contrast, MoaB shows high similarity to MogA, but little is known about its physiological role. All well studied members of this family form highly stable trimers.
Probab=23.15 E-value=2.6e+02 Score=21.57 Aligned_cols=62 Identities=15% Similarity=0.154 Sum_probs=43.3
Q ss_pred CCHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHc-----CCeEEEECCCCCCCCccccccCHhHH
Q 024023 183 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA-----GLHTVIVGSSVPVPPADHALNSIHNI 244 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~-----G~~~v~v~~~~~~~~a~~~~~~l~~l 244 (274)
.+...+...++++|+.....-.+.|...++..+-.. +...+....|...-..|++.+-+.++
T Consensus 20 ~n~~~l~~~l~~~G~~v~~~~~v~Dd~~~i~~~l~~~~~~~~~DlVittGG~s~g~~D~t~~al~~~ 86 (152)
T cd00886 20 RSGPALVELLEEAGHEVVAYEIVPDDKDEIREALIEWADEDGVDLILTTGGTGLAPRDVTPEATRPL 86 (152)
T ss_pred chHHHHHHHHHHcCCeeeeEEEcCCCHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCcCcHHHHHHH
Confidence 345578889999999988889999999887665332 56666555554455566666555555
No 327
>TIGR01369 CPSaseII_lrg carbamoyl-phosphate synthase, large subunit. In several thermophilic species (Methanobacterium thermoautotrophicum, Methanococcus jannaschii, Aquifex aeolicus), the large subunit appears split, at different points, into two separate genes.
Probab=23.14 E-value=8.5e+02 Score=25.62 Aligned_cols=68 Identities=13% Similarity=0.049 Sum_probs=47.0
Q ss_pred HHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCCccccccCHhHHHHHHHHHHh
Q 024023 186 EAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWE 253 (274)
Q Consensus 186 ~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~~~~~ 253 (274)
..+..+++++|++--+...+.+-..-...+...|.+.+.=+........-.++.+.++|..++.++..
T Consensus 671 ~~f~~lL~~~GIp~P~~~~v~s~ee~~~~~~~igyPvIVKP~~~~Gg~gv~iv~~~eeL~~~l~~a~~ 738 (1050)
T TIGR01369 671 EKFSELLDELGIPQPKWKTATSVEEAVEFASEIGYPVLVRPSYVLGGRAMEIVYNEEELRRYLEEAVE 738 (1050)
T ss_pred HHHHHHHHHCCcCCCCeEEECCHHHHHHHHHhcCCCEEEEECCCCCCCCeEEECCHHHHHHHHHHHHH
Confidence 45778899999987777777553322344667898877655433334455678899999998887754
No 328
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=22.97 E-value=1.9e+02 Score=23.85 Aligned_cols=25 Identities=20% Similarity=0.060 Sum_probs=17.9
Q ss_pred CCcEEEEeCCChHHHHHHHHHcCCC
Q 024023 119 PQRKIIFTNADQKHAMEVLGRLGLE 143 (274)
Q Consensus 119 ~~~~~i~s~~~~~~~~~~l~~~gl~ 143 (274)
|.+++++|+.+...+..+++.+++.
T Consensus 30 gi~~viaTGR~~~~v~~~~~~l~l~ 54 (236)
T TIGR02471 30 AVGFGIATGRSVESAKSRYAKLNLP 54 (236)
T ss_pred CceEEEEeCCCHHHHHHHHHhCCCC
Confidence 4667777777777777777777664
No 329
>PRK01372 ddl D-alanine--D-alanine ligase; Reviewed
Probab=22.61 E-value=4.9e+02 Score=22.29 Aligned_cols=68 Identities=10% Similarity=0.066 Sum_probs=45.1
Q ss_pred HHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCCccccccCHhHHHHHHHHHH
Q 024023 185 LEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIW 252 (274)
Q Consensus 185 ~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~~~~ 252 (274)
......++++.|++-.+.+.+.+...-...+...|.+.+.-+........-..+.+.+++.+.+..+.
T Consensus 99 K~~~k~~l~~~gIp~p~~~~~~~~~~~~~~~~~~~~P~ivKP~~g~~s~Gv~~v~~~~el~~~~~~~~ 166 (304)
T PRK01372 99 KLRTKLVWQAAGLPTPPWIVLTREEDLLAAIDKLGLPLVVKPAREGSSVGVSKVKEEDELQAALELAF 166 (304)
T ss_pred HHHHHHHHHHCCCCCCCEEEEeCcchHHHHHhhcCCCEEEeeCCCCCCCCEEEeCCHHHHHHHHHHHH
Confidence 34677889999997666666655443344566778887765444333344567888999888776664
No 330
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=22.43 E-value=2.1e+02 Score=23.96 Aligned_cols=25 Identities=12% Similarity=-0.052 Sum_probs=16.2
Q ss_pred CCcEEEEeCCChHHHHHHHHHcCCC
Q 024023 119 PQRKIIFTNADQKHAMEVLGRLGLE 143 (274)
Q Consensus 119 ~~~~~i~s~~~~~~~~~~l~~~gl~ 143 (274)
+..++++|+.+...++.+++.+++.
T Consensus 37 gi~fv~aTGR~~~~~~~~~~~~~~~ 61 (249)
T TIGR01485 37 DSLLVYSTGRSPHSYKELQKQKPLL 61 (249)
T ss_pred CceEEEEcCCCHHHHHHHHhcCCCC
Confidence 3566677777777777666666553
No 331
>PRK10342 glycerate kinase I; Provisional
Probab=21.91 E-value=6.2e+02 Score=23.17 Aligned_cols=74 Identities=15% Similarity=0.058 Sum_probs=46.6
Q ss_pred HHHHHHHHHcCCCCcc---ceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCCCCCeEEEEcC
Q 024023 131 KHAMEVLGRLGLEDCF---EGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDD 207 (274)
Q Consensus 131 ~~~~~~l~~~gl~~~f---d~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~~~~~~i~VGD 207 (274)
.-+..+++..+++..+ |.|++++. .+..+...+|- |..+.+..++++++. +++.|-
T Consensus 267 ~G~d~v~~~~~l~~~l~~ADLVITGEG------------------~~D~QTl~GK~-p~gVa~~A~~~~vPv--iai~G~ 325 (381)
T PRK10342 267 SGIEIVTTALNLEEHIHDCTLVITGEG------------------RIDSQSIHGKV-PIGVANVAKKYHKPV--IGIAGS 325 (381)
T ss_pred CHHHHHHHhcCHHHHhccCCEEEECCC------------------cCcccccCCcc-HHHHHHHHHHhCCCE--EEEecc
Confidence 3355666667766544 66898873 33344445564 445666778888642 444465
Q ss_pred ChhcHHHHHHcCCeEEEE
Q 024023 208 SARNIASAKAAGLHTVIV 225 (274)
Q Consensus 208 s~~Di~~a~~~G~~~v~v 225 (274)
-..|.....+.|+..++-
T Consensus 326 ~~~~~~~~~~~g~~av~~ 343 (381)
T PRK10342 326 LTDDVGVVHQHGIDAVFS 343 (381)
T ss_pred cCCChHHHHhcCceEEEE
Confidence 457788888999877653
No 332
>PRK13790 phosphoribosylamine--glycine ligase; Provisional
Probab=21.78 E-value=4.7e+02 Score=23.64 Aligned_cols=67 Identities=9% Similarity=0.078 Sum_probs=47.2
Q ss_pred HHHHHHHHHhCCCCCeEEEEcCChhcHHHHHHcCCeEEEECCCCCCCCccccccCHhHHHHHHHHHH
Q 024023 186 EAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIW 252 (274)
Q Consensus 186 ~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~~G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~~~~ 252 (274)
...+.++++.|++-.....+.|...-.+.+...|.+.+.-+.+.....--.++.+.+++...++.++
T Consensus 69 ~~~k~~l~~~gIptp~~~~~~~~~ea~~~~~~~g~PvVvKp~~~~~gkGV~iv~~~~el~~a~~~~~ 135 (379)
T PRK13790 69 LFAKKIMEKYNIPTADYKEVERKKDALTYIENCELPVVVKKDGLAAGKGVIIADTIEAARSAIEIMY 135 (379)
T ss_pred HHHHHHHHHCCCCCCCEEEECCHHHHHHHHHhcCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHHH
Confidence 4566889999997666666655433344456778888866655444455678899999999888876
No 333
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=21.70 E-value=1.7e+02 Score=26.77 Aligned_cols=80 Identities=20% Similarity=0.159 Sum_probs=54.1
Q ss_pred CChhHHHHHHhCC--CcEEEEeCCChHHHHHHHHHcCCCCccceeEecccCCCCCCCCCCCCcccccccCcccccCCCCC
Q 024023 107 PDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPS 184 (274)
Q Consensus 107 ~~~~~~~~L~~l~--~~~~i~s~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~ 184 (274)
-.|++..++..++ +++++.|.........++..++-...|...+...... -+.
T Consensus 253 kRp~l~~fl~~ls~~~~l~~ft~s~~~y~~~v~d~l~~~k~~~~~lfr~sc~-------------------------~~~ 307 (390)
T COG5190 253 KRPELDYFLGKLSKIHELVYFTASVKRYADPVLDILDSDKVFSHRLFRESCV-------------------------SYL 307 (390)
T ss_pred CChHHHHHHhhhhhhEEEEEEecchhhhcchHHHhccccceeehhhhcccce-------------------------ecc
Confidence 3488888888885 7889999887777777777776555444433333221 122
Q ss_pred HHHHHHHHHHhCCCCCeEEEEcCChhcH
Q 024023 185 LEAIETAIRIANVDPKKTIFFDDSARNI 212 (274)
Q Consensus 185 ~~~~~~~l~~~g~~~~~~i~VGDs~~Di 212 (274)
+. +..-+.+++...+.+++|.++++=.
T Consensus 308 G~-~ikDis~i~r~l~~viiId~~p~SY 334 (390)
T COG5190 308 GV-YIKDISKIGRSLDKVIIIDNSPASY 334 (390)
T ss_pred Cc-hhhhHHhhccCCCceEEeeCChhhh
Confidence 22 3336667788889999999999654
No 334
>TIGR02667 moaB_proteo molybdenum cofactor biosynthesis protein B, proteobacterial. This model represents the MoaB protein molybdopterin biosynthesis regions in Proteobacteria. This crystallized but incompletely characterized protein is thought to be involved in, though not required for, early steps in molybdopterin biosynthesis. It may bind a molybdopterin precursor. A distinctive conserved motif PCN near the C-terminus helps distinguish this clade from other homologs, including sets of proteins designated MogA.
Probab=21.66 E-value=2.7e+02 Score=21.87 Aligned_cols=61 Identities=8% Similarity=0.111 Sum_probs=43.6
Q ss_pred CHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHH-----cCCeEEEECCCCCCCCccccccCHhHH
Q 024023 184 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKA-----AGLHTVIVGSSVPVPPADHALNSIHNI 244 (274)
Q Consensus 184 ~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~-----~G~~~v~v~~~~~~~~a~~~~~~l~~l 244 (274)
+...+...++++|......-.|.|....|..+-. .++..+....|......|++.+-+.++
T Consensus 23 n~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVIttGGtg~g~~D~t~eal~~l 88 (163)
T TIGR02667 23 SGQYLVERLTEAGHRLADRAIVKDDIYQIRAQVSAWIADPDVQVILITGGTGFTGRDVTPEALEPL 88 (163)
T ss_pred cHHHHHHHHHHCCCeEEEEEEcCCCHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCCcHHHHHHH
Confidence 3457888999999998888899999988766532 256766666555556666666655555
No 335
>cd06538 CIDE_N_FSP27 CIDE_N domain of FSP27 proteins. The CIDE-N (cell death-inducing DFF45-like effector, N-terminal) domain is found in the FSP27/CIDE-C protein, which has been identified as a n adipocyte lipid droplet protein that negatively regulates lipolysis and promotes triglyceride accumulation. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. The CIDE-N domain of FSP27 is sufficient to increase apoptosis in vitro when overexpressed.
Probab=21.16 E-value=68 Score=22.17 Aligned_cols=16 Identities=25% Similarity=0.208 Sum_probs=13.0
Q ss_pred cEEEEecCCCccCCch
Q 024023 22 ECLLFDLDDTLYPLST 37 (274)
Q Consensus 22 k~viFDlDGTL~d~~~ 37 (274)
-.++++-|||.++++.
T Consensus 40 ~~lvL~eDGT~Vd~Ee 55 (79)
T cd06538 40 SSLVLDEDGTGVDTEE 55 (79)
T ss_pred cEEEEecCCcEEccHH
Confidence 4689999999998444
No 336
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=21.13 E-value=3.3e+02 Score=19.62 Aligned_cols=30 Identities=23% Similarity=0.253 Sum_probs=20.1
Q ss_pred CCHHHHHHHHHHhCCCCCeEEEEcCCh-hcHHH
Q 024023 183 PSLEAIETAIRIANVDPKKTIFFDDSA-RNIAS 214 (274)
Q Consensus 183 p~~~~~~~~l~~~g~~~~~~i~VGDs~-~Di~~ 214 (274)
-|...++++++.+ +..+.|.||||- .|.+.
T Consensus 50 ~K~~~i~~i~~~f--P~~kfiLIGDsgq~Dpei 80 (100)
T PF09949_consen 50 HKRDNIERILRDF--PERKFILIGDSGQHDPEI 80 (100)
T ss_pred HHHHHHHHHHHHC--CCCcEEEEeeCCCcCHHH
Confidence 3455666666644 346799999998 68544
No 337
>PRK12815 carB carbamoyl phosphate synthase large subunit; Reviewed
Probab=21.11 E-value=9e+02 Score=25.50 Aligned_cols=66 Identities=14% Similarity=0.017 Sum_probs=46.6
Q ss_pred HHHHHHHHHHhCCCCCeEEEEcCChhcH-HHHHHcCCeEEEECCCCCCCCccccccCHhHHHHHHHHH
Q 024023 185 LEAIETAIRIANVDPKKTIFFDDSARNI-ASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEI 251 (274)
Q Consensus 185 ~~~~~~~l~~~g~~~~~~i~VGDs~~Di-~~a~~~G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~~~ 251 (274)
...+..+++++|++......+.+ ..|+ ..+...|.+++.=+........-+++.+-++|..++...
T Consensus 671 K~~f~~ll~~~GIp~P~~~~~~s-~ee~~~~~~~igyPvVVKP~~~~Gg~gv~iv~~~eeL~~~l~~~ 737 (1068)
T PRK12815 671 RDRFYQLLDELGLPHVPGLTATD-EEEAFAFAKRIGYPVLIRPSYVIGGQGMAVVYDEPALEAYLAEN 737 (1068)
T ss_pred HHHHHHHHHHcCcCCCCeEEeCC-HHHHHHHHHhcCCCEEEEeCCCCCCCCEEEECCHHHHHHHHHHh
Confidence 34578899999997766666643 4443 455678988876554444455667888999998888776
No 338
>COG0378 HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription]
Probab=21.05 E-value=2.2e+02 Score=23.50 Aligned_cols=64 Identities=16% Similarity=0.133 Sum_probs=46.6
Q ss_pred CCCHHHHHHHHHHhCCCCCeEEEEcCCh--hcHHHHHH-cCCeEEEECCCCC-CCCccccccCHhHHH
Q 024023 182 KPSLEAIETAIRIANVDPKKTIFFDDSA--RNIASAKA-AGLHTVIVGSSVP-VPPADHALNSIHNIK 245 (274)
Q Consensus 182 kp~~~~~~~~l~~~g~~~~~~i~VGDs~--~Di~~a~~-~G~~~v~v~~~~~-~~~a~~~~~~l~~l~ 245 (274)
-.|...+++.++.+.-..+=++.-||=+ +|-+..++ .|.+.+.+.+|.. +..+......++++.
T Consensus 24 SGKTaLie~~~~~L~~~~~~aVI~~Di~t~~Da~~l~~~~g~~i~~v~TG~~CH~da~m~~~ai~~l~ 91 (202)
T COG0378 24 SGKTALIEKTLRALKDEYKIAVITGDIYTKEDADRLRKLPGEPIIGVETGKGCHLDASMNLEAIEELV 91 (202)
T ss_pred cCHHHHHHHHHHHHHhhCCeEEEeceeechhhHHHHHhCCCCeeEEeccCCccCCcHHHHHHHHHHHh
Confidence 4457788888888877777788899988 48888888 9999999999843 333444444444444
No 339
>PRK00286 xseA exodeoxyribonuclease VII large subunit; Reviewed
Probab=21.00 E-value=4.8e+02 Score=24.10 Aligned_cols=111 Identities=17% Similarity=0.188 Sum_probs=60.7
Q ss_pred CCcEEEEeCCChHHHHHHHHHcCCCCc-cceeEecccCCCCCCCCCCCCcccccccCcccccCCCCCHHHHHHHHHHhCC
Q 024023 119 PQRKIIFTNADQKHAMEVLGRLGLEDC-FEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANV 197 (274)
Q Consensus 119 ~~~~~i~s~~~~~~~~~~l~~~gl~~~-fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~l~~~g~ 197 (274)
..+++|+|+.+-..+..+++.+.-... +..++..-.+. |...+.-+..+++.++-
T Consensus 135 p~~I~viTs~~gAa~~D~~~~~~~r~p~~~~~~~~~~vQ------------------------G~~A~~~i~~al~~~~~ 190 (438)
T PRK00286 135 PKRIGVITSPTGAAIRDILTVLRRRFPLVEVIIYPTLVQ------------------------GEGAAASIVAAIERANA 190 (438)
T ss_pred CCEEEEEeCCccHHHHHHHHHHHhcCCCCeEEEecCcCc------------------------CccHHHHHHHHHHHhcC
Confidence 367999999888777777776643322 33333333222 35556666677777665
Q ss_pred CCCeEEEE---cCChhcH------HHHH---HcCCeEEEECCCCC-----------------CCCccccccCHhHHHHHH
Q 024023 198 DPKKTIFF---DDSARNI------ASAK---AAGLHTVIVGSSVP-----------------VPPADHALNSIHNIKEAI 248 (274)
Q Consensus 198 ~~~~~i~V---GDs~~Di------~~a~---~~G~~~v~v~~~~~-----------------~~~a~~~~~~l~~l~~~l 248 (274)
..-++|.| |=|..|+ .-|+ ++-++++ .+-|++ .+.+.+++++..++...|
T Consensus 191 ~~~Dviii~RGGGS~eDL~~Fn~e~v~~ai~~~~~Pvi-s~IGHE~D~tl~D~vAd~ra~TPtaaae~~~~~~~e~~q~L 269 (438)
T PRK00286 191 RGEDVLIVARGGGSLEDLWAFNDEAVARAIAASRIPVI-SAVGHETDFTIADFVADLRAPTPTAAAELAVPDRAELLQRL 269 (438)
T ss_pred CCCCEEEEecCCCCHHHhhccCcHHHHHHHHcCCCCEE-EeccCCCCccHHHHhhhccCCChHHHHHHhCccHHHHHHHH
Confidence 32367776 4444454 3333 3455544 222332 234566677777766555
Q ss_pred HHHHhh
Q 024023 249 PEIWEG 254 (274)
Q Consensus 249 ~~~~~~ 254 (274)
..+...
T Consensus 270 d~l~~r 275 (438)
T PRK00286 270 QQLQQR 275 (438)
T ss_pred HHHHHH
Confidence 444433
No 340
>PRK14021 bifunctional shikimate kinase/3-dehydroquinate synthase; Provisional
Probab=20.94 E-value=7.5e+02 Score=23.73 Aligned_cols=35 Identities=14% Similarity=0.128 Sum_probs=24.9
Q ss_pred HHhCC-CCCeEEEEcCCh-hcHHHHHH----cCCeEEEECC
Q 024023 193 RIANV-DPKKTIFFDDSA-RNIASAKA----AGLHTVIVGS 227 (274)
Q Consensus 193 ~~~g~-~~~~~i~VGDs~-~Di~~a~~----~G~~~v~v~~ 227 (274)
.+.+. ..+-++.||-+. .|+..+-+ .|++.+.+++
T Consensus 263 ~~~~~~r~D~IIAIGGGsv~D~AKfvA~~y~rGi~~i~vPT 303 (542)
T PRK14021 263 GNEGFTRSDAIVGLGGGAATDLAGFVAATWMRGIRYVNCPT 303 (542)
T ss_pred HhcCCCCCcEEEEEcChHHHHHHHHHHHHHHcCCCEEEeCC
Confidence 33454 345567799877 79777766 5999998877
No 341
>cd00008 53EXOc 5'-3' exonuclease; T5 type 5'-3' exonuclease domains may co-occur with DNA polymerase I (Pol I) domains, or be part of Pol I containing complexes. They digest dsDNA and ssDNA, releasing mono-,di- and tri-nucleotides, as well as oligonucleotides, and have also been reported to possess RNase H activity. Also called 5' nuclease family, involved in structure-specific cleavage of flaps formed by Pol I activity (similar to mammalian flap endonuclease I, FEN-1). A single nucleic acid strand may be threaded through the 5' nuclease enzyme before cleavage occurs. The domain binds two divalent metal ions which are necessary for activity.
Probab=20.85 E-value=19 Score=30.56 Aligned_cols=35 Identities=29% Similarity=0.377 Sum_probs=22.0
Q ss_pred HHHHHHHhCCCCCe----EEEEcCChhcHHHHHHcCCeE
Q 024023 188 IETAIRIANVDPKK----TIFFDDSARNIASAKAAGLHT 222 (274)
Q Consensus 188 ~~~~l~~~g~~~~~----~i~VGDs~~Di~~a~~~G~~~ 222 (274)
...+.+++|+.|++ ...+||+--.+......|-++
T Consensus 157 ~~~v~~~~g~~p~q~~d~~~L~GD~sDnipGv~GiG~kt 195 (240)
T cd00008 157 EENVIEKYGVTPAQIIDYKALMGDSSDNIPGVPGIGEKT 195 (240)
T ss_pred HHHHHHHhCcCHHHHHHHHHHcCCcccCCCCCCccCHHH
Confidence 34567889998875 446787666665544444443
No 342
>PRK09482 flap endonuclease-like protein; Provisional
Probab=20.47 E-value=22 Score=30.47 Aligned_cols=36 Identities=14% Similarity=0.124 Sum_probs=24.6
Q ss_pred HHHHHHHhCCCCCeEE----EEcCChhcHHHHHHcCCeEE
Q 024023 188 IETAIRIANVDPKKTI----FFDDSARNIASAKAAGLHTV 223 (274)
Q Consensus 188 ~~~~l~~~g~~~~~~i----~VGDs~~Di~~a~~~G~~~v 223 (274)
...+.+++|+.|++.+ .+||+.-+|......|-+++
T Consensus 156 ~~~v~~~~Gv~P~q~~D~~aL~GD~sDnIpGVpGIG~KtA 195 (256)
T PRK09482 156 APFIEQEFGVEPQQLPDYWGLAGISSSKIPGVAGIGPKSA 195 (256)
T ss_pred HHHHHHHhCCCHHHHHHHHHHhCCCccCCCCCCCcChHHH
Confidence 3556788999887644 67888877776655554443
No 343
>PF02017 CIDE-N: CIDE-N domain; InterPro: IPR003508 This domain consists of caspase-activated (CAD) nucleases, which induce DNA fragmentation and chromatin condensation during apoptosis, and the cell death activator proteins CIDE-A and CIDE-B, which are inhibitors of CAD nuclease. The two proteins interact through the region defined by the method signatures.; GO: 0006915 apoptosis, 0005622 intracellular; PDB: 1IBX_A 2EEL_A 1F2R_I 1C9F_A 1D4B_A.
Probab=20.43 E-value=70 Score=22.06 Aligned_cols=16 Identities=19% Similarity=0.052 Sum_probs=12.7
Q ss_pred cEEEEecCCCccCCch
Q 024023 22 ECLLFDLDDTLYPLST 37 (274)
Q Consensus 22 k~viFDlDGTL~d~~~ 37 (274)
-.++++=|||.++++.
T Consensus 41 ~~lvL~eDGT~VddEe 56 (78)
T PF02017_consen 41 VRLVLEEDGTEVDDEE 56 (78)
T ss_dssp CEEEETTTTCBESSCH
T ss_pred cEEEEeCCCcEEccHH
Confidence 3578999999999554
No 344
>TIGR00200 cinA_nterm competence/damage-inducible protein CinA N-terminal domain. cinA is a DNA damage- or competence-inducible protein that is polycistronic with recA in a number of species
Probab=20.36 E-value=3.1e+02 Score=25.32 Aligned_cols=58 Identities=7% Similarity=0.099 Sum_probs=38.5
Q ss_pred CHHHHHHHHHHhCCCCCeEEEEcCChhcHHHHHH---cCCeEEEECCCCCCCCccccccCH
Q 024023 184 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKA---AGLHTVIVGSSVPVPPADHALNSI 241 (274)
Q Consensus 184 ~~~~~~~~l~~~g~~~~~~i~VGDs~~Di~~a~~---~G~~~v~v~~~~~~~~a~~~~~~l 241 (274)
+...+...++.+|+.......|+|...+|..+-. .....+....|-..-..|++.+.+
T Consensus 21 N~~~l~~~L~~~G~~v~~~~~v~Dd~~~i~~~l~~a~~~~DlVIttGGlgpt~dD~t~eav 81 (413)
T TIGR00200 21 NAQWLADFLAHQGLPLSRRTTVGDNPERLKTIIRIASERADVLIFNGGLGPTSDDLTAETI 81 (413)
T ss_pred hHHHHHHHHHHCCCeEEEEEEeCCCHHHHHHHHHHHhcCCCEEEEcCCCCCCCcccHHHHH
Confidence 4567888999999999999999999998766643 244555554443333344433333
No 345
>PLN02257 phosphoribosylamine--glycine ligase
Probab=20.36 E-value=6.9e+02 Score=23.14 Aligned_cols=67 Identities=10% Similarity=0.071 Sum_probs=46.1
Q ss_pred HHHHHHHHHHhCCCCCeEEEEcCChhcH-HHHHHcCCeEEEECCCCCCCCccccccCHhHHHHHHHHHH
Q 024023 185 LEAIETAIRIANVDPKKTIFFDDSARNI-ASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIW 252 (274)
Q Consensus 185 ~~~~~~~l~~~g~~~~~~i~VGDs~~Di-~~a~~~G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~~~~ 252 (274)
....+.+++++|++-.....+. +..++ ..+...|.+.+.-+.+.....--+++.+.+++.+++..+.
T Consensus 103 K~~~K~~l~~~GIptp~~~~~~-~~~e~~~~~~~~g~PvVVKp~~~~~GkGV~iv~~~~el~~a~~~~~ 170 (434)
T PLN02257 103 KNFMKDLCDKYKIPTAKYETFT-DPAAAKKYIKEQGAPIVVKADGLAAGKGVVVAMTLEEAYEAVDSML 170 (434)
T ss_pred HHHHHHHHHHcCCCCCCeEEeC-CHHHHHHHHHHcCCCEEEEcCCCCCCCCEEEECCHHHHHHHHHHHH
Confidence 3456788999999766655554 34443 3345678887766655544556678899999998888764
No 346
>PF08620 RPAP1_C: RPAP1-like, C-terminal; InterPro: IPR013929 Inhibition of RNA polymerase II-associated protein 1 (RPAP1) synthesis in Saccharomyces cerevisiae (Baker's yeast) results in changes in global gene expression that are similar to those caused by the loss of the RNAPII subunit Rpb11 []. This entry represents the C-terminal region that contains the motif GLHHH. This region is conserved from yeast to humans.
Probab=20.20 E-value=39 Score=22.99 Aligned_cols=9 Identities=44% Similarity=0.770 Sum_probs=8.2
Q ss_pred EEecCCCcc
Q 024023 25 LFDLDDTLY 33 (274)
Q Consensus 25 iFDlDGTL~ 33 (274)
=|||+|.|+
T Consensus 4 RFdf~G~l~ 12 (73)
T PF08620_consen 4 RFDFDGNLL 12 (73)
T ss_pred cccCCCCEe
Confidence 499999999
No 347
>PRK02186 argininosuccinate lyase; Provisional
Probab=20.10 E-value=9.5e+02 Score=24.64 Aligned_cols=68 Identities=7% Similarity=-0.025 Sum_probs=47.0
Q ss_pred HHHHHHHHHHhCCCCCeEEEEcCChhcHH-HHHHcCCeEEEECCCCCCCCccccccCHhHHHHHHHHHHh
Q 024023 185 LEAIETAIRIANVDPKKTIFFDDSARNIA-SAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWE 253 (274)
Q Consensus 185 ~~~~~~~l~~~g~~~~~~i~VGDs~~Di~-~a~~~G~~~v~v~~~~~~~~a~~~~~~l~~l~~~l~~~~~ 253 (274)
....++.+++.|++......+.+ ..|+. .+...|.++|.-+........-+.+.+.+++...+..+..
T Consensus 108 K~~~r~~L~~~GIp~P~~~~v~~-~~e~~~~~~~~~~PvVVKP~~g~gS~GV~~v~~~~el~~a~~~~~~ 176 (887)
T PRK02186 108 KKRLARTLRDHGIDVPRTHALAL-RAVALDALDGLTYPVVVKPRMGSGSVGVRLCASVAEAAAHCAALRR 176 (887)
T ss_pred HHHHHHHHHHcCCCCCCEEEeCC-HHHHHHHHHhCCCCEEEEeCCCCCCCCeEEECCHHHHHHHHHHHHh
Confidence 35677889999998666666644 45543 3456788877665544444455778999999988887764
No 348
>PF06901 FrpC: RTX iron-regulated protein FrpC; InterPro: IPR010692 This family consists of several RTX iron-regulated FrpC proteins which appear to be found exclusively in Neisseria meningitidis. FrpC has been shown to be related to the RTX family of bacterial cytotoxins. FrpC is found in the meningococcal outer membrane. The function of this family is unknown although it is thought to be a virulence factor [].
Probab=20.01 E-value=73 Score=26.06 Aligned_cols=13 Identities=23% Similarity=0.348 Sum_probs=11.5
Q ss_pred cEEEEecCCCccC
Q 024023 22 ECLLFDLDDTLYP 34 (274)
Q Consensus 22 k~viFDlDGTL~d 34 (274)
..|-||+|||++-
T Consensus 59 ~~v~~D~~GT~m~ 71 (271)
T PF06901_consen 59 HTVTFDFQGTKMV 71 (271)
T ss_pred eeEEEeccceEEE
Confidence 5789999999985
Done!