BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024026
(273 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A5DDU4|URE2_PICGU Protein URE2 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS
566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324)
GN=URE2 PE=3 SV=2
Length = 301
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Query: 187 PSKKLELFSYENNPYARIVREALCELELPY--ILQNVGDGSSRTKLLVDITGSKEVPYLI 244
PS LFS+ + P V L ELELP+ I + G R V I + VP LI
Sbjct: 57 PSDGYTLFSHRSAPNGFKVAIILSELELPFNTIFLDFNHGEQRAPEFVTINPNARVPALI 116
Query: 245 DP-NTSTQIGDYKKILSYLFQSY 266
D N +T I + I+ YL Y
Sbjct: 117 DHFNDNTSIWESGAIILYLVSKY 139
>sp|Q6BM74|URE2_DEBHA Protein URE2 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767
/ JCM 1990 / NBRC 0083 / IGC 2968) GN=URE2 PE=3 SV=2
Length = 308
Score = 39.7 bits (91), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 185 DPPSKKLELFSYENNPYARIVREALCELELPY--ILQNVGDGSSRTKLLVDITGSKEVPY 242
+ P++ LFS+ + P V L EL LP+ I + +G R V I + VP
Sbjct: 62 NQPTEGYTLFSHRSAPNGFKVAIILSELNLPFNTIFLDFNNGEQRAPEFVTINPNARVPA 121
Query: 243 LIDP-NTSTQIGDYKKILSYLFQSY 266
LID N +T I + I+ YL Y
Sbjct: 122 LIDHFNENTSIWESGAIILYLVSKY 146
>sp|Q8NJR0|URE2_CANMA Protein URE2 OS=Candida maltosa GN=URE2 PE=3 SV=1
Length = 328
Score = 39.7 bits (91), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 185 DPPSKKLELFSYENNPYARIVREALCELELPY--ILQNVGDGSSRTKLLVDITGSKEVPY 242
+ P++ LFS+ + P V L EL LP+ I + +G R V I + VP
Sbjct: 82 NQPAEGYTLFSHRSAPNGFKVAIILSELNLPFNTIFLDFNNGEQRAPEFVTINPNARVPA 141
Query: 243 LIDP-NTSTQIGDYKKILSYLFQSY 266
LID N +T I + I+ YL Y
Sbjct: 142 LIDHFNENTSIWESGAIILYLVSKY 166
>sp|Q96WL3|URE2_CANAL Protein URE2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
GN=URE2 PE=3 SV=1
Length = 344
Score = 39.3 bits (90), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Query: 185 DPPSKKLELFSYENNPYARIVREALCELELPY--ILQNVGDGSSRTKLLVDITGSKEVPY 242
+ P++ LFS+ + P V L EL LP+ + +G RT V I + VP
Sbjct: 98 NQPTEGFTLFSHRSAPNGFKVAIILSELNLPFNTFFLDFNNGEQRTPEFVTINPNARVPA 157
Query: 243 LIDP-NTSTQIGDYKKILSYLFQSY 266
LID N +T I + I YL Y
Sbjct: 158 LIDHYNDNTSIWESGAITLYLVSKY 182
>sp|Q3YS31|SYE1_EHRCJ Glutamate--tRNA ligase 1 OS=Ehrlichia canis (strain Jake) GN=gltX1
PE=3 SV=1
Length = 469
Score = 35.4 bits (80), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 71/170 (41%), Gaps = 40/170 (23%)
Query: 134 ESGDIVNYLFQQYGKGRSPSTGLLESTLIT-----GW------MPTIFRAGRGMTLWEKA 182
E+G+ ++ Q G ++G+L + GW + TI +A R ++ E
Sbjct: 234 ENGNKLSKRHQAIGIHEYKNSGILPEAIFNYLLRMGWSHENDEVITIDQAIRWFSI-EGI 292
Query: 183 RPDPP---SKKLELFSYENNPYARIV-REALCELELP----------------YILQNVG 222
P SKKLE NN Y I E + + +P Y+L+ +
Sbjct: 293 GQSPSRLDSKKLEFL---NNHYINITDNETILNMIIPIIEEKTGHIITDVKKGYLLKGLS 349
Query: 223 DGSSRTKLLVDITGS-----KEVPYLIDPNTSTQIGDYKKILSYLFQSYS 267
+ RTK LV++ +++P ID + T I DYK I S L+ + S
Sbjct: 350 ELKKRTKNLVNLAKESLFYVEDIPISIDQESITVIKDYKHIFSILYDNLS 399
>sp|Q74G05|PRMA_GEOSL Ribosomal protein L11 methyltransferase OS=Geobacter sulfurreducens
(strain ATCC 51573 / DSM 12127 / PCA) GN=prmA PE=3 SV=1
Length = 299
Score = 34.7 bits (78), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 15/105 (14%)
Query: 163 TGW----MPTIFRAGRGMTL---WEKARPDPPSKKLEL-----FSYENNPYARIVREALC 210
TGW +PT R GR + + WE P+P + +EL F +P R+ EAL
Sbjct: 103 TGWRQHFVPT--RIGRHLVIKPTWEPFAPEPGDQVIELDPGMAFGTGTHPTTRLCLEALE 160
Query: 211 ELELPYILQNVGDGSSRTKLLVDITGSKEVPYL-IDPNTSTQIGD 254
L P + +VG GS + G+++V IDP+ G+
Sbjct: 161 TLGRPDRVLDVGTGSGILAIAAVRLGARQVIGTDIDPDAVIVAGE 205
>sp|Q2GGL8|SYE2_EHRCR Glutamate--tRNA ligase 2 OS=Ehrlichia chaffeensis (strain Arkansas)
GN=gltX2 PE=3 SV=1
Length = 469
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 209 LCELELPYILQNVGDGSSRTKLLVDITGS-----KEVPYLIDPNTSTQIGDYKKILSYLF 263
L E++ Y+L+ + + RTK LV++ ++VP ID S I DYK + S L+
Sbjct: 336 LNEVKKGYLLKGLYELKKRTKNLVNLANESLFYVEDVPISIDQEASAIIKDYKHVFSILY 395
Query: 264 QSYS 267
+ S
Sbjct: 396 NNLS 399
>sp|P0AC62|GLRX3_ECOLI Glutaredoxin-3 OS=Escherichia coli (strain K12) GN=grxC PE=1 SV=2
Length = 83
Score = 33.9 bits (76), Expect = 1.4, Method: Composition-based stats.
Identities = 11/46 (23%), Positives = 25/46 (54%)
Query: 70 LQLFEFEACPFCRRVREAITELDLSVEVFPCPKGSIRHREMVRRLG 115
++++ E CP+C R + ++ +S + P + + EM++R G
Sbjct: 4 VEIYTKETCPYCHRAKALLSSKGVSFQELPIDGNAAKREEMIKRSG 49
>sp|P0AC63|GLRX3_ECOL6 Glutaredoxin-3 OS=Escherichia coli O6:H1 (strain CFT073 / ATCC
700928 / UPEC) GN=grxC PE=3 SV=2
Length = 83
Score = 33.9 bits (76), Expect = 1.4, Method: Composition-based stats.
Identities = 11/46 (23%), Positives = 25/46 (54%)
Query: 70 LQLFEFEACPFCRRVREAITELDLSVEVFPCPKGSIRHREMVRRLG 115
++++ E CP+C R + ++ +S + P + + EM++R G
Sbjct: 4 VEIYTKETCPYCHRAKALLSSKGVSFQELPIDGNAAKREEMIKRSG 49
>sp|P0AC64|GLRX3_ECO57 Glutaredoxin-3 OS=Escherichia coli O157:H7 GN=grxC PE=3 SV=2
Length = 83
Score = 33.9 bits (76), Expect = 1.4, Method: Composition-based stats.
Identities = 11/46 (23%), Positives = 25/46 (54%)
Query: 70 LQLFEFEACPFCRRVREAITELDLSVEVFPCPKGSIRHREMVRRLG 115
++++ E CP+C R + ++ +S + P + + EM++R G
Sbjct: 4 VEIYTKETCPYCHRAKALLSSKGVSFQELPIDGNAAKREEMIKRSG 49
>sp|Q9VG93|GSTT7_DROME Glutathione S-transferase D7 OS=Drosophila melanogaster GN=GstD7
PE=2 SV=1
Length = 224
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 69 RLQLFEFEACPFCRRVREAITEL--DLSVEVFPCPKGSIRHREMVRRLGGKEQFPFLIDP 126
L L+ F P R ++ L +L+ ++ +G E VR + + P L+D
Sbjct: 3 NLDLYNFPMAPASRAIQMVAKALGLELNSKLINTMEGDQLKPEFVR-INPQHTIPTLVD- 60
Query: 127 NTGVSMYESGDIVNYLFQQYGKGRSP 152
G ++ES I YL ++YGK SP
Sbjct: 61 -NGFVIWESRAIAVYLVEKYGKPDSP 85
>sp|Q7ZUC7|PGES2_DANRE Prostaglandin E synthase 2 OS=Danio rerio GN=ptges2 PE=2 SV=1
Length = 377
Score = 33.1 bits (74), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 60 EISNSDSPTRLQLFEFEACPFCRRVREAITELDL---SVEVFPCPKGSIR 106
+ S+ D+ +L L++++ CPFC +VR + L VEV P + I+
Sbjct: 97 DASDLDTDLKLTLYQYKTCPFCSKVRAFLDYHRLPYEIVEVNPVMRQEIK 146
>sp|P16038|CSH_SHEEP Chorionic somatomammotropin hormone OS=Ovis aries GN=CSH PE=1 SV=1
Length = 236
Score = 32.3 bits (72), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 102 KGSIRHREMVRRLGGKEQFPF--LIDPNTGVSMYES---GDIVNYLFQQYGKG 149
+G +H R GK Q P L D T V+ Y S G++VN +QYG+G
Sbjct: 35 QGQAQHPPYCRNQPGKCQIPLQSLFDRATTVANYNSKLAGEMVNRFDEQYGQG 87
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,835,344
Number of Sequences: 539616
Number of extensions: 4383613
Number of successful extensions: 9352
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 9345
Number of HSP's gapped (non-prelim): 20
length of query: 273
length of database: 191,569,459
effective HSP length: 116
effective length of query: 157
effective length of database: 128,974,003
effective search space: 20248918471
effective search space used: 20248918471
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)