BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024027
(273 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 119/241 (49%), Gaps = 14/241 (5%)
Query: 18 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS---SNCILDIFQ 74
F E EM+ HRNL+++ C + LV YM +GS+ L S LD +
Sbjct: 81 QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPK 140
Query: 75 RLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMT 134
R I + A L YLH C +IH D+K N+LLD+ A + DFG+AKL+ +D +
Sbjct: 141 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX 200
Query: 135 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFF----NGEMTLKH 190
TIG++APEY G+ S DV+ +G+ML+E TG++ ++ + ++ L
Sbjct: 201 XA-VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR-AFDLARLANDDDVMLLD 258
Query: 191 WVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK 250
WV L +E L D+ K++ V + +A+ CT SP +R E+V
Sbjct: 259 WVKGLLKEKKLEA-----LVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRM 313
Query: 251 L 251
L
Sbjct: 314 L 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 118/241 (48%), Gaps = 14/241 (5%)
Query: 18 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS---SNCILDIFQ 74
F E EM+ HRNL+++ C + LV YM +GS+ L S LD +
Sbjct: 73 QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPK 132
Query: 75 RLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMT 134
R I + A L YLH C +IH D+K N+LLD+ A + DFG+AKL+ +D +
Sbjct: 133 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX 192
Query: 135 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFF----NGEMTLKH 190
IG++APEY G+ S DV+ +G+ML+E TG++ ++ + ++ L
Sbjct: 193 XA-VRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR-AFDLARLANDDDVMLLD 250
Query: 191 WVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK 250
WV L +E L D+ K++ V + +A+ CT SP +R E+V
Sbjct: 251 WVKGLLKEKKLEA-----LVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRM 305
Query: 251 L 251
L
Sbjct: 306 L 306
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 110 bits (276), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 123/238 (51%), Gaps = 17/238 (7%)
Query: 30 RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI---LDIFQRLNIMIDVASAL 86
RH +L+ +I C L+ +YM +G+L+++LY S+ + QRL I I A L
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 87 EYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMA 146
YLH + +IH D+K N+LLD+N V ++DFGI+K DQ+ T+GY+
Sbjct: 153 HYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYID 209
Query: 147 PEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMT-LKHWVNDWLPISTME-VV 204
PEY +GR++ DVYSFG++L E + + EM L W + +E +V
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIV 269
Query: 205 DANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL---LKIRDSLL 259
D NL + + E F + A+ C S E R + +++ KL L++++S++
Sbjct: 270 DPNLADK-----IRPESLRKF-GDTAVKCLALSSEDRPSMGDVLWKLEYALRLQESVI 321
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 122/238 (51%), Gaps = 17/238 (7%)
Query: 30 RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI---LDIFQRLNIMIDVASAL 86
RH +L+ +I C L+ +YM +G+L+++LY S+ + QRL I I A L
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 87 EYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMA 146
YLH + +IH D+K N+LLD+N V ++DFGI+K Q+ T+GY+
Sbjct: 153 HYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYID 209
Query: 147 PEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMT-LKHWVNDWLPISTME-VV 204
PEY +GR++ DVYSFG++L E + + EM L W + +E +V
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIV 269
Query: 205 DANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL---LKIRDSLL 259
D NL + + + + + A+ C S E R + +++ KL L++++S++
Sbjct: 270 DPNLADK------IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQESVI 321
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 121/263 (46%), Gaps = 39/263 (14%)
Query: 1 MEVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLE 60
M VAVK A K F E E++ +++H +++K C + + +V EYM HG L
Sbjct: 46 MLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLN 105
Query: 61 KYLYS---------------SNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPD 105
K+L + + L + Q L+I +AS + YL S +H DL
Sbjct: 106 KFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLATR 162
Query: 106 NVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFG 165
N L+ NL+ + DFG+++ + D T+ I +M PE + +T DV+SFG
Sbjct: 163 NCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFG 222
Query: 166 IMLMETFT-GKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVS 224
++L E FT GK+P W +S EV++ ++Q + C
Sbjct: 223 VILWEIFTYGKQP-----------------WFQLSNTEVIEC--ITQGRV-LERPRVCPK 262
Query: 225 FVFNLAMACTVESPEQRINAKEI 247
V+++ + C P+QR+N KEI
Sbjct: 263 EVYDVMLGCWQREPQQRLNIKEI 285
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 115/262 (43%), Gaps = 36/262 (13%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKY 62
VAVK A K F E E++ +++H +++K C + +V EYM HG L K+
Sbjct: 46 VAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKF 105
Query: 63 L--YSSNCIL----------DIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLD 110
L + + +L Q L+I +A+ + YL S +H DL N L+
Sbjct: 106 LRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVG 162
Query: 111 DNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLME 170
+NL+ + DFG+++ + D T+ I +M PE + +T DV+S G++L E
Sbjct: 163 ENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWE 222
Query: 171 TFT-GKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNL 229
FT GK+P Y+ N E+ +E + + Q C V+ L
Sbjct: 223 IFTYGKQPWYQLSNNEV--------------IECITQGRVLQR------PRTCPQEVYEL 262
Query: 230 AMACTVESPEQRINAKEIVTKL 251
+ C P R N K I T L
Sbjct: 263 MLGCWQREPHMRKNIKGIHTLL 284
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 116/269 (43%), Gaps = 44/269 (16%)
Query: 1 MEVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLE 60
M VAVK A + F E E++ ++H+++++ C+ +V EYM HG L
Sbjct: 43 MLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 102
Query: 61 KYLYS--------------SNCILDIFQRLNIMIDVASALEYL---HFGCSAPVIHCDLK 103
++L S + L + Q L + VA+ + YL HF +H DL
Sbjct: 103 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHF------VHRDLA 156
Query: 104 PDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYS 163
N L+ LV + DFG+++ + D +T+ I +M PE + +T DV+S
Sbjct: 157 TRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWS 216
Query: 164 FGIMLMETFT-GKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQC 222
FG++L E FT GK+P W +S E +D +E C
Sbjct: 217 FGVVLWEIFTYGKQP-----------------WYQLSNTEAIDCITQGRE---LERPRAC 256
Query: 223 VSFVFNLAMACTVESPEQRINAKEIVTKL 251
V+ + C P+QR + K++ +L
Sbjct: 257 PPEVYAIMRGCWQREPQQRHSIKDVHARL 285
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 116/269 (43%), Gaps = 44/269 (16%)
Query: 1 MEVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLE 60
M VAVK A + F E E++ ++H+++++ C+ +V EYM HG L
Sbjct: 49 MLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 108
Query: 61 KYLYS--------------SNCILDIFQRLNIMIDVASALEYL---HFGCSAPVIHCDLK 103
++L S + L + Q L + VA+ + YL HF +H DL
Sbjct: 109 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHF------VHRDLA 162
Query: 104 PDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYS 163
N L+ LV + DFG+++ + D +T+ I +M PE + +T DV+S
Sbjct: 163 TRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWS 222
Query: 164 FGIMLMETFT-GKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQC 222
FG++L E FT GK+P W +S E +D +E C
Sbjct: 223 FGVVLWEIFTYGKQP-----------------WYQLSNTEAIDCITQGRE---LERPRAC 262
Query: 223 VSFVFNLAMACTVESPEQRINAKEIVTKL 251
V+ + C P+QR + K++ +L
Sbjct: 263 PPEVYAIMRGCWQREPQQRHSIKDVHARL 291
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 116/269 (43%), Gaps = 44/269 (16%)
Query: 1 MEVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLE 60
M VAVK A + F E E++ ++H+++++ C+ +V EYM HG L
Sbjct: 72 MLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 131
Query: 61 KYLYS--------------SNCILDIFQRLNIMIDVASALEYL---HFGCSAPVIHCDLK 103
++L S + L + Q L + VA+ + YL HF +H DL
Sbjct: 132 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHF------VHRDLA 185
Query: 104 PDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYS 163
N L+ LV + DFG+++ + D +T+ I +M PE + +T DV+S
Sbjct: 186 TRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWS 245
Query: 164 FGIMLMETFT-GKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQC 222
FG++L E FT GK+P W +S E +D +E C
Sbjct: 246 FGVVLWEIFTYGKQP-----------------WYQLSNTEAIDCITQGRE---LERPRAC 285
Query: 223 VSFVFNLAMACTVESPEQRINAKEIVTKL 251
V+ + C P+QR + K++ +L
Sbjct: 286 PPEVYAIMRGCWQREPQQRHSIKDVHARL 314
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 128/266 (48%), Gaps = 33/266 (12%)
Query: 2 EVAVKVFNLQCGRAFKS---FDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
EV V + L+ G K F E +M H N+I++ S + ++ EYM +G+
Sbjct: 73 EVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGA 132
Query: 59 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
L+K+L + + Q + ++ +A+ ++YL + +H DL N+L++ NLV +S
Sbjct: 133 LDKFLREKDGEFSVLQLVGMLRGIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVS 189
Query: 119 DFGIAKLLIGEDQSMTQTQTLATIG--YMAPEYGREGRVSTNGDVYSFGIMLMETFT-GK 175
DFG++++L +D T T + I + APE + ++ DV+SFGI++ E T G+
Sbjct: 190 DFGLSRVL-EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGE 248
Query: 176 KPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTV 235
+P +E N E+ +ND + T C S ++ L M C
Sbjct: 249 RPYWELSNHEVMKA--INDGFRLPT------------------PMDCPSAIYQLMMQCWQ 288
Query: 236 ESPEQRINAKEIVT---KLLKIRDSL 258
+ +R +IV+ KL++ DSL
Sbjct: 289 QERARRPKFADIVSILDKLIRAPDSL 314
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 84/164 (51%), Gaps = 4/164 (2%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 76
+ F E E+M + H L+++ C + LV E+M HG L YL + + L
Sbjct: 50 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLL 109
Query: 77 NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQT 136
+ +DV + YL C VIH DL N L+ +N V +SDFG+ + ++ +DQ + T
Sbjct: 110 GMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVL-DDQYTSST 165
Query: 137 QTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYE 180
T + + +PE R S+ DV+SFG+++ E F+ K YE
Sbjct: 166 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE 209
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 95/180 (52%), Gaps = 7/180 (3%)
Query: 2 EVAVKVFNLQCGRAFK--SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
+VAVK+ Q A + F E +MK +RH N++ + + + ++V EY+ GSL
Sbjct: 62 DVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSL 121
Query: 60 EKYLYSSNC--ILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYL 117
+ L+ S LD +RL++ DVA + YLH + P++H DLK N+L+D +
Sbjct: 122 YRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVHRDLKSPNLLVDKKYTVKV 180
Query: 118 SDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
DFG+++L + T +MAPE R+ + DVYSFG++L E T ++P
Sbjct: 181 CDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 84/164 (51%), Gaps = 4/164 (2%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 76
+ F E E+M + H L+++ C + LV E+M HG L YL + + L
Sbjct: 45 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLL 104
Query: 77 NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQT 136
+ +DV + YL C VIH DL N L+ +N V +SDFG+ + ++ +DQ + T
Sbjct: 105 GMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVL-DDQYTSST 160
Query: 137 QTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYE 180
T + + +PE R S+ DV+SFG+++ E F+ K YE
Sbjct: 161 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE 204
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 84/164 (51%), Gaps = 4/164 (2%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 76
+ F E E+M + H L+++ C + LV E+M HG L YL + + L
Sbjct: 47 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLL 106
Query: 77 NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQT 136
+ +DV + YL C VIH DL N L+ +N V +SDFG+ + ++ +DQ + T
Sbjct: 107 GMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVL-DDQYTSST 162
Query: 137 QTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYE 180
T + + +PE R S+ DV+SFG+++ E F+ K YE
Sbjct: 163 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE 206
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 83/162 (51%), Gaps = 4/162 (2%)
Query: 19 FDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 78
F E E+M + H L+++ C + LV E+M HG L YL + + L +
Sbjct: 69 FIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGM 128
Query: 79 MIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQT 138
+DV + YL C VIH DL N L+ +N V +SDFG+ + ++ +DQ + T T
Sbjct: 129 CLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGT 184
Query: 139 LATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYE 180
+ + +PE R S+ DV+SFG+++ E F+ K YE
Sbjct: 185 KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE 226
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 84/164 (51%), Gaps = 4/164 (2%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 76
+ F E E+M + H L+++ C + LV E+M HG L YL + + L
Sbjct: 48 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLL 107
Query: 77 NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQT 136
+ +DV + YL C VIH DL N L+ +N V +SDFG+ + ++ +DQ + T
Sbjct: 108 GMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVL-DDQYTSST 163
Query: 137 QTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYE 180
T + + +PE R S+ DV+SFG+++ E F+ K YE
Sbjct: 164 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE 207
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 96/180 (53%), Gaps = 7/180 (3%)
Query: 2 EVAVKVFNLQCGRAFK--SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
+VAVK+ Q A + F E +MK +RH N++ + + + ++V EY+ GSL
Sbjct: 62 DVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSL 121
Query: 60 EKYLYSSNCI--LDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYL 117
+ L+ S LD +RL++ DVA + YLH + P++H +LK N+L+D +
Sbjct: 122 YRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVHRNLKSPNLLVDKKYTVKV 180
Query: 118 SDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
DFG+++L ++ T +MAPE R+ + DVYSFG++L E T ++P
Sbjct: 181 CDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 84/164 (51%), Gaps = 4/164 (2%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 76
+ F E E+M + H L+++ C + LV E+M HG L YL + + L
Sbjct: 47 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLL 106
Query: 77 NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQT 136
+ +DV + YL A VIH DL N L+ +N V +SDFG+ + ++ +DQ + T
Sbjct: 107 GMCLDVCEGMAYLE---EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVL-DDQYTSST 162
Query: 137 QTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYE 180
T + + +PE R S+ DV+SFG+++ E F+ K YE
Sbjct: 163 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE 206
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 134/282 (47%), Gaps = 38/282 (13%)
Query: 2 EVAVKVFNLQCG---RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
E++V + L+ G + + F E +M H N+I++ + + +V EYM +GS
Sbjct: 73 EISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 132
Query: 59 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
L+ +L + + Q + ++ +AS ++YL +H DL N+L++ NLV +S
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 189
Query: 119 DFGIAKLLIGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKK 176
DFG+A++L + ++ T+ I + +PE + ++ DV+S+GI+L E + G++
Sbjct: 190 DFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 177 PTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVE 236
P +E N ++ ++ VD E C + ++ L + C +
Sbjct: 250 PYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAALYQLMLDCWQK 289
Query: 237 SPEQRINAKEIVTKLLKIRDSLLRNVGGRRI------RQSNL 272
R ++IV+ I D L+RN G +I R SNL
Sbjct: 290 DRNNRPKFEQIVS----ILDKLIRNPGSLKIITSAAARPSNL 327
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 122/270 (45%), Gaps = 32/270 (11%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYMPHGSLE 60
VAVK + F+ E E++KS++H N++K C + + L++EY+P+GSL
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 61 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
YL +D + L + +EYL + IH DL N+L+++ + DF
Sbjct: 120 DYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDF 176
Query: 121 GIAKLLIGEDQSM-TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT----GK 175
G+ K+L + + + + I + APE E + S DV+SFG++L E FT K
Sbjct: 177 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 236
Query: 176 KPTYEFF-------NGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFN 228
P EF G+M + H + L + + + C ++
Sbjct: 237 SPPAEFMRMIGNDKQGQMIVFHLIE---------------LLKNNGRLPRPDGCPDEIYM 281
Query: 229 LAMACTVESPEQRINAKEIVTKLLKIRDSL 258
+ C + QR + +++ ++ +IRD++
Sbjct: 282 IMTECWNNNVNQRPSFRDLALRVDQIRDNM 311
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 122/270 (45%), Gaps = 32/270 (11%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYMPHGSLE 60
VAVK + F+ E E++KS++H N++K C + + L++EY+P+GSL
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 61 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
YL +D + L + +EYL + IH DL N+L+++ + DF
Sbjct: 102 DYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDF 158
Query: 121 GIAKLLIGEDQSM-TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT----GK 175
G+ K+L + + + + I + APE E + S DV+SFG++L E FT K
Sbjct: 159 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 218
Query: 176 KPTYEFF-------NGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFN 228
P EF G+M + H + L + + + C ++
Sbjct: 219 SPPAEFMRMIGNDKQGQMIVFHLIE---------------LLKNNGRLPRPDGCPDEIYM 263
Query: 229 LAMACTVESPEQRINAKEIVTKLLKIRDSL 258
+ C + QR + +++ ++ +IRD++
Sbjct: 264 IMTECWNNNVNQRPSFRDLALRVDQIRDNM 293
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 122/270 (45%), Gaps = 32/270 (11%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYMPHGSLE 60
VAVK + F+ E E++KS++H N++K C + + L++EY+P+GSL
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 61 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
YL +D + L + +EYL + IH DL N+L+++ + DF
Sbjct: 102 DYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDF 158
Query: 121 GIAKLLIGEDQSM-TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT----GK 175
G+ K+L + + + + I + APE E + S DV+SFG++L E FT K
Sbjct: 159 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 218
Query: 176 KPTYEFF-------NGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFN 228
P EF G+M + H + L + + + C ++
Sbjct: 219 SPPAEFMRMIGNDKQGQMIVFHLIE---------------LLKNNGRLPRPDGCPDEIYM 263
Query: 229 LAMACTVESPEQRINAKEIVTKLLKIRDSL 258
+ C + QR + +++ ++ +IRD++
Sbjct: 264 IMTECWNNNVNQRPSFRDLALRVDQIRDNM 293
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 122/270 (45%), Gaps = 32/270 (11%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYMPHGSLE 60
VAVK + F+ E E++KS++H N++K C + + L++EY+P+GSL
Sbjct: 46 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 105
Query: 61 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
YL +D + L + +EYL + IH DL N+L+++ + DF
Sbjct: 106 DYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDF 162
Query: 121 GIAKLLIGEDQSM-TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT----GK 175
G+ K+L + + + + I + APE E + S DV+SFG++L E FT K
Sbjct: 163 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 222
Query: 176 KPTYEFF-------NGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFN 228
P EF G+M + H + L + + + C ++
Sbjct: 223 SPPAEFMRMIGNDKQGQMIVFHLIE---------------LLKNNGRLPRPDGCPDEIYM 267
Query: 229 LAMACTVESPEQRINAKEIVTKLLKIRDSL 258
+ C + QR + +++ ++ +IRD++
Sbjct: 268 IMTECWNNNVNQRPSFRDLALRVDQIRDNM 297
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 122/270 (45%), Gaps = 32/270 (11%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYMPHGSLE 60
VAVK + F+ E E++KS++H N++K C + + L++EY+P+GSL
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 61 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
YL +D + L + +EYL + IH DL N+L+++ + DF
Sbjct: 120 DYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDF 176
Query: 121 GIAKLLIGEDQSM-TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT----GK 175
G+ K+L + + + + I + APE E + S DV+SFG++L E FT K
Sbjct: 177 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 236
Query: 176 KPTYEFF-------NGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFN 228
P EF G+M + H + L + + + C ++
Sbjct: 237 SPPAEFMRMIGNDKQGQMIVFHLIE---------------LLKNNGRLPRPDGCPDEIYM 281
Query: 229 LAMACTVESPEQRINAKEIVTKLLKIRDSL 258
+ C + QR + +++ ++ +IRD++
Sbjct: 282 IMTECWNNNVNQRPSFRDLALRVDQIRDNM 311
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 122/270 (45%), Gaps = 32/270 (11%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYMPHGSLE 60
VAVK + F+ E E++KS++H N++K C + + L++EY+P+GSL
Sbjct: 49 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 108
Query: 61 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
YL +D + L + +EYL + IH DL N+L+++ + DF
Sbjct: 109 DYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDF 165
Query: 121 GIAKLLIGEDQSM-TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT----GK 175
G+ K+L + + + + I + APE E + S DV+SFG++L E FT K
Sbjct: 166 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 225
Query: 176 KPTYEFF-------NGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFN 228
P EF G+M + H + L + + + C ++
Sbjct: 226 SPPAEFMRMIGNDKQGQMIVFHLIE---------------LLKNNGRLPRPDGCPDEIYM 270
Query: 229 LAMACTVESPEQRINAKEIVTKLLKIRDSL 258
+ C + QR + +++ ++ +IRD++
Sbjct: 271 IMTECWNNNVNQRPSFRDLALRVDQIRDNM 300
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 122/270 (45%), Gaps = 32/270 (11%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYMPHGSLE 60
VAVK + F+ E E++KS++H N++K C + + L++EY+P+GSL
Sbjct: 41 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 100
Query: 61 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
YL +D + L + +EYL + IH DL N+L+++ + DF
Sbjct: 101 DYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDF 157
Query: 121 GIAKLLIGEDQSM-TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT----GK 175
G+ K+L + + + + I + APE E + S DV+SFG++L E FT K
Sbjct: 158 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 217
Query: 176 KPTYEFF-------NGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFN 228
P EF G+M + H + L + + + C ++
Sbjct: 218 SPPAEFMRMIGNDKQGQMIVFHLIE---------------LLKNNGRLPRPDGCPDEIYM 262
Query: 229 LAMACTVESPEQRINAKEIVTKLLKIRDSL 258
+ C + QR + +++ ++ +IRD++
Sbjct: 263 IMTECWNNNVNQRPSFRDLALRVDQIRDNM 292
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 122/270 (45%), Gaps = 32/270 (11%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYMPHGSLE 60
VAVK + F+ E E++KS++H N++K C + + L++EY+P+GSL
Sbjct: 48 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 107
Query: 61 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
YL +D + L + +EYL + IH DL N+L+++ + DF
Sbjct: 108 DYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDF 164
Query: 121 GIAKLLIGEDQSM-TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT----GK 175
G+ K+L + + + + I + APE E + S DV+SFG++L E FT K
Sbjct: 165 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 224
Query: 176 KPTYEFF-------NGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFN 228
P EF G+M + H + L + + + C ++
Sbjct: 225 SPPAEFMRMIGNDKQGQMIVFHLIE---------------LLKNNGRLPRPDGCPDEIYM 269
Query: 229 LAMACTVESPEQRINAKEIVTKLLKIRDSL 258
+ C + QR + +++ ++ +IRD++
Sbjct: 270 IMTECWNNNVNQRPSFRDLALRVDQIRDNM 299
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 122/270 (45%), Gaps = 32/270 (11%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYMPHGSLE 60
VAVK + F+ E E++KS++H N++K C + + L++EY+P+GSL
Sbjct: 47 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 106
Query: 61 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
YL +D + L + +EYL + IH DL N+L+++ + DF
Sbjct: 107 DYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDF 163
Query: 121 GIAKLLIGEDQSM-TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT----GK 175
G+ K+L + + + + I + APE E + S DV+SFG++L E FT K
Sbjct: 164 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 223
Query: 176 KPTYEFF-------NGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFN 228
P EF G+M + H + L + + + C ++
Sbjct: 224 SPPAEFMRMIGNDKQGQMIVFHLIE---------------LLKNNGRLPRPDGCPDEIYM 268
Query: 229 LAMACTVESPEQRINAKEIVTKLLKIRDSL 258
+ C + QR + +++ ++ +IRD++
Sbjct: 269 IMTECWNNNVNQRPSFRDLALRVDQIRDNM 298
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 122/270 (45%), Gaps = 32/270 (11%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYMPHGSLE 60
VAVK + F+ E E++KS++H N++K C + + L++EY+P+GSL
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 61 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
YL +D + L + +EYL + IH DL N+L+++ + DF
Sbjct: 105 DYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDF 161
Query: 121 GIAKLLIGEDQSM-TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT----GK 175
G+ K+L + + + + I + APE E + S DV+SFG++L E FT K
Sbjct: 162 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 221
Query: 176 KPTYEFF-------NGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFN 228
P EF G+M + H + L + + + C ++
Sbjct: 222 SPPAEFMRMIGNDKQGQMIVFHLIE---------------LLKNNGRLPRPDGCPDEIYM 266
Query: 229 LAMACTVESPEQRINAKEIVTKLLKIRDSL 258
+ C + QR + +++ ++ +IRD++
Sbjct: 267 IMTECWNNNVNQRPSFRDLALRVDQIRDNM 296
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 123/270 (45%), Gaps = 32/270 (11%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYMPHGSLE 60
VAVK + F+ E E++KS++H N++K C + + L++EY+P+GSL
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 61 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
YL + +D + L + +EYL + IH DL N+L+++ + DF
Sbjct: 105 DYLQAHAERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDF 161
Query: 121 GIAKLLIGEDQSM-TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT----GK 175
G+ K+L + + + + I + APE E + S DV+SFG++L E FT K
Sbjct: 162 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 221
Query: 176 KPTYEFF-------NGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFN 228
P EF G+M + H + L + + + C ++
Sbjct: 222 SPPAEFMRMIGNDKQGQMIVFHLIE---------------LLKNNGRLPRPDGCPDEIYM 266
Query: 229 LAMACTVESPEQRINAKEIVTKLLKIRDSL 258
+ C + QR + +++ ++ +IRD++
Sbjct: 267 IMTECWNNNVNQRPSFRDLALRVDQIRDNM 296
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 121/270 (44%), Gaps = 32/270 (11%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYMPHGSLE 60
VAVK + F+ E E++KS++H N++K C + + L++EY+P+GSL
Sbjct: 40 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 99
Query: 61 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
YL +D + L + +EYL + IH DL N+L+++ + DF
Sbjct: 100 DYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDF 156
Query: 121 GIAKLLIGEDQSM-TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT----GK 175
G+ K+L + + + + I + APE E + S DV+SFG++L E FT K
Sbjct: 157 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 216
Query: 176 KPTYEFF-------NGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFN 228
P EF G+M + H + L + + + C ++
Sbjct: 217 SPPAEFMRMIGNDKQGQMIVFHLIE---------------LLKNNGRLPRPDGCPDEIYM 261
Query: 229 LAMACTVESPEQRINAKEIVTKLLKIRDSL 258
+ C + QR + +++ ++ +IRD +
Sbjct: 262 IMTECWNNNVNQRPSFRDLALRVDQIRDQM 291
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 121/270 (44%), Gaps = 32/270 (11%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYMPHGSLE 60
VAVK + F+ E E++KS++H N++K C + + L++EY+P+GSL
Sbjct: 73 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 132
Query: 61 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
YL +D + L + +EYL + IH DL N+L+++ + DF
Sbjct: 133 DYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDF 189
Query: 121 GIAKLLIGEDQSM-TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT----GK 175
G+ K+L + + + + I + APE E + S DV+SFG++L E FT K
Sbjct: 190 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 249
Query: 176 KPTYEFF-------NGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFN 228
P EF G+M + H + L + + + C ++
Sbjct: 250 SPPAEFMRMIGNDKQGQMIVFHLIE---------------LLKNNGRLPRPDGCPDEIYM 294
Query: 229 LAMACTVESPEQRINAKEIVTKLLKIRDSL 258
+ C + QR + +++ ++ +IRD +
Sbjct: 295 IMTECWNNNVNQRPSFRDLALRVDQIRDQM 324
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 90.5 bits (223), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 89/163 (54%), Gaps = 12/163 (7%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-----LD 71
+ FD E ++M +H NL++++ S+ + LV YMP+GSL L +C+ L
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL---SCLDGTPPLS 131
Query: 72 IFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQ 131
R I A+ + +LH IH D+K N+LLD+ A +SDFG+A+ Q
Sbjct: 132 WHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188
Query: 132 SMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTG 174
++ ++ + T YMAPE R G ++ D+YSFG++L+E TG
Sbjct: 189 TVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG 230
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 134/282 (47%), Gaps = 38/282 (13%)
Query: 2 EVAVKVFNLQCG---RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
E++V + L+ G + + F E +M H N+I++ + + +V EYM +GS
Sbjct: 73 EISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 132
Query: 59 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
L+ +L + + Q + ++ +AS ++YL +H DL N+L++ NLV +S
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 189
Query: 119 DFGIAKLLIGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKK 176
DFG++++L + ++ T+ I + +PE + ++ DV+S+GI+L E + G++
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 177 PTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVE 236
P +E N ++ ++ VD E C + ++ L + C +
Sbjct: 250 PYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAALYQLMLDCWQK 289
Query: 237 SPEQRINAKEIVTKLLKIRDSLLRNVGGRRI------RQSNL 272
R ++IV+ I D L+RN G +I R SNL
Sbjct: 290 DRNNRPKFEQIVS----ILDKLIRNPGSLKIITSAAARPSNL 327
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 134/282 (47%), Gaps = 38/282 (13%)
Query: 2 EVAVKVFNLQCG---RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
E++V + L+ G + + F E +M H N+I++ + + +V EYM +GS
Sbjct: 73 EISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 132
Query: 59 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
L+ +L + + Q + ++ +AS ++YL +H DL N+L++ NLV +S
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVS 189
Query: 119 DFGIAKLLIGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKK 176
DFG++++L + ++ T+ I + +PE + ++ DV+S+GI+L E + G++
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 177 PTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVE 236
P +E N ++ ++ VD E C + ++ L + C +
Sbjct: 250 PYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAALYQLMLDCWQK 289
Query: 237 SPEQRINAKEIVTKLLKIRDSLLRNVGGRRI------RQSNL 272
R ++IV+ I D L+RN G +I R SNL
Sbjct: 290 DRNNRPKFEQIVS----ILDKLIRNPGSLKIITSAAARPSNL 327
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 134/282 (47%), Gaps = 38/282 (13%)
Query: 2 EVAVKVFNLQCG---RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
E++V + L+ G + + F E +M H N+I++ + + +V EYM +GS
Sbjct: 73 EISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 132
Query: 59 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
L+ +L + + Q + ++ +AS ++YL +H DL N+L++ NLV +S
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 189
Query: 119 DFGIAKLLIGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKK 176
DFG++++L + ++ T+ I + +PE + ++ DV+S+GI+L E + G++
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 177 PTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVE 236
P +E N ++ ++ VD E C + ++ L + C +
Sbjct: 250 PYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAALYQLMLDCWQK 289
Query: 237 SPEQRINAKEIVTKLLKIRDSLLRNVGGRRI------RQSNL 272
R ++IV+ I D L+RN G +I R SNL
Sbjct: 290 DRNNRPKFEQIVS----ILDKLIRNPGSLKIITSAAARPSNL 327
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 134/282 (47%), Gaps = 38/282 (13%)
Query: 2 EVAVKVFNLQCG---RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
E++V + L+ G + + F E +M H N+I++ + + +V EYM +GS
Sbjct: 73 EISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 132
Query: 59 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
L+ +L + + Q + ++ +AS ++YL +H DL N+L++ NLV +S
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 189
Query: 119 DFGIAKLLIGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKK 176
DFG++++L + ++ T+ I + +PE + ++ DV+S+GI+L E + G++
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 177 PTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVE 236
P +E N ++ ++ VD E C + ++ L + C +
Sbjct: 250 PYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAALYQLMLDCWQK 289
Query: 237 SPEQRINAKEIVTKLLKIRDSLLRNVGGRRI------RQSNL 272
R ++IV+ I D L+RN G +I R SNL
Sbjct: 290 DRNNRPKFEQIVS----ILDKLIRNPGSLKIITSAAARPSNL 327
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 134/282 (47%), Gaps = 38/282 (13%)
Query: 2 EVAVKVFNLQCG---RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
E++V + L+ G + + F E +M H N+I++ + + +V EYM +GS
Sbjct: 73 EISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 132
Query: 59 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
L+ +L + + Q + ++ +AS ++YL +H DL N+L++ NLV +S
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 189
Query: 119 DFGIAKLLIGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKK 176
DFG++++L + ++ T+ I + +PE + ++ DV+S+GI+L E + G++
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 177 PTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVE 236
P +E N ++ ++ VD E C + ++ L + C +
Sbjct: 250 PYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAALYQLMLDCWQK 289
Query: 237 SPEQRINAKEIVTKLLKIRDSLLRNVGGRRI------RQSNL 272
R ++IV+ I D L+RN G +I R SNL
Sbjct: 290 DRNNRPKFEQIVS----ILDKLIRNPGSLKIITSAAARPSNL 327
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 134/282 (47%), Gaps = 38/282 (13%)
Query: 2 EVAVKVFNLQCG---RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
E++V + L+ G + + F E +M H N+I++ + + +V EYM +GS
Sbjct: 71 EISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 130
Query: 59 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
L+ +L + + Q + ++ +AS ++YL +H DL N+L++ NLV +S
Sbjct: 131 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 187
Query: 119 DFGIAKLLIGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKK 176
DFG++++L + ++ T+ I + +PE + ++ DV+S+GI+L E + G++
Sbjct: 188 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 247
Query: 177 PTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVE 236
P +E N ++ ++ VD E C + ++ L + C +
Sbjct: 248 PYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAALYQLMLDCWQK 287
Query: 237 SPEQRINAKEIVTKLLKIRDSLLRNVGGRRI------RQSNL 272
R ++IV+ I D L+RN G +I R SNL
Sbjct: 288 DRNNRPKFEQIVS----ILDKLIRNPGSLKIITSAAARPSNL 325
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 134/282 (47%), Gaps = 38/282 (13%)
Query: 2 EVAVKVFNLQCG---RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
E++V + L+ G + + F E +M H N+I++ + + +V EYM +GS
Sbjct: 61 EISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 120
Query: 59 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
L+ +L + + Q + ++ +AS ++YL +H DL N+L++ NLV +S
Sbjct: 121 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 177
Query: 119 DFGIAKLLIGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKK 176
DFG++++L + ++ T+ I + +PE + ++ DV+S+GI+L E + G++
Sbjct: 178 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 237
Query: 177 PTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVE 236
P +E N ++ ++ VD E C + ++ L + C +
Sbjct: 238 PYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAALYQLMLDCWQK 277
Query: 237 SPEQRINAKEIVTKLLKIRDSLLRNVGGRRI------RQSNL 272
R ++IV+ I D L+RN G +I R SNL
Sbjct: 278 DRNNRPKFEQIVS----ILDKLIRNPGSLKIITSAAARPSNL 315
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 124/271 (45%), Gaps = 34/271 (12%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYMPHGSLE 60
VAVK + F+ E E++KS++H N++K C + + L++EY+P+GSL
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 61 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
YL +D + L + +EYL + IH DL N+L+++ + DF
Sbjct: 102 DYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDF 158
Query: 121 GIAKLLIGEDQSMTQTQTL--ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT----G 174
G+ K+L +D+ + + + I + APE E + S DV+SFG++L E FT
Sbjct: 159 GLTKVL-PQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 217
Query: 175 KKPTYEFF-------NGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVF 227
K P EF G+M + H + L + + + C ++
Sbjct: 218 KSPPAEFMRMIGNDKQGQMIVFHLIE---------------LLKNNGRLPRPDGCPDEIY 262
Query: 228 NLAMACTVESPEQRINAKEIVTKLLKIRDSL 258
+ C + QR + +++ ++ +IRD++
Sbjct: 263 MIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 133/282 (47%), Gaps = 38/282 (13%)
Query: 2 EVAVKVFNLQCG---RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
E++V + L+ G + + F E +M H N+I++ + + +V EYM +GS
Sbjct: 73 EISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 132
Query: 59 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
L+ +L + + Q + ++ +AS ++YL +H DL N+L++ NLV +S
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 189
Query: 119 DFGIAKLLIGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKK 176
DFG+ ++L + ++ T+ I + +PE + ++ DV+S+GI+L E + G++
Sbjct: 190 DFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 177 PTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVE 236
P +E N ++ ++ VD E C + ++ L + C +
Sbjct: 250 PYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAALYQLMLDCWQK 289
Query: 237 SPEQRINAKEIVTKLLKIRDSLLRNVGGRRI------RQSNL 272
R ++IV+ I D L+RN G +I R SNL
Sbjct: 290 DRNNRPKFEQIVS----ILDKLIRNPGSLKIITSAAARPSNL 327
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 134/282 (47%), Gaps = 38/282 (13%)
Query: 2 EVAVKVFNLQCG---RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
E++V + L+ G + + F E +M H N+I++ + + +V EYM +GS
Sbjct: 44 EISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 103
Query: 59 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
L+ +L + + Q + ++ +AS ++YL +H DL N+L++ NLV +S
Sbjct: 104 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 160
Query: 119 DFGIAKLLIGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKK 176
DFG++++L + ++ T+ I + +PE + ++ DV+S+GI+L E + G++
Sbjct: 161 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 220
Query: 177 PTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVE 236
P +E N ++ ++ VD E C + ++ L + C +
Sbjct: 221 PYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAALYQLMLDCWQK 260
Query: 237 SPEQRINAKEIVTKLLKIRDSLLRNVGGRRI------RQSNL 272
R ++IV+ I D L+RN G +I R SNL
Sbjct: 261 DRNNRPKFEQIVS----ILDKLIRNPGSLKIITSAAARPSNL 298
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 123/270 (45%), Gaps = 32/270 (11%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYMPHGSLE 60
VAVK + F+ E E++KS++H N++K C + + L++E++P+GSL
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLR 104
Query: 61 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
+YL +D + L + +EYL + IH DL N+L+++ + DF
Sbjct: 105 EYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDF 161
Query: 121 GIAKLLIGEDQSM-TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT----GK 175
G+ K+L + + + + I + APE E + S DV+SFG++L E FT K
Sbjct: 162 GLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 221
Query: 176 KPTYEFF-------NGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFN 228
P EF G+M + H + L + + + C ++
Sbjct: 222 SPPAEFMRMIGNDKQGQMIVFHLIE---------------LLKNNGRLPRPDGCPDEIYM 266
Query: 229 LAMACTVESPEQRINAKEIVTKLLKIRDSL 258
+ C + QR + +++ ++ +IRD++
Sbjct: 267 IMTECWNNNVNQRPSFRDLALRVDQIRDNM 296
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 88/163 (53%), Gaps = 12/163 (7%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-----LD 71
+ FD E ++M +H NL++++ S+ + LV YMP+GSL L +C+ L
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL---SCLDGTPPLS 131
Query: 72 IFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQ 131
R I A+ + +LH IH D+K N+LLD+ A +SDFG+A+ Q
Sbjct: 132 WHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188
Query: 132 SMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTG 174
++ + + T YMAPE R G ++ D+YSFG++L+E TG
Sbjct: 189 TVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG 230
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 122/265 (46%), Gaps = 32/265 (12%)
Query: 2 EVAVKVFNLQCG---RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
+V V + L+ G R + F E +M H N+I++ + +V EYM +GS
Sbjct: 77 DVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGS 136
Query: 59 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
L+ +L + + I Q + ++ V + + YL +H DL NVL+D NLV +S
Sbjct: 137 LDTFLRTHDGQFTIMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVS 193
Query: 119 DFGIAKLLIGE-DQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKK 176
DFG++++L + D + T T I + APE S+ DV+SFG+++ E G++
Sbjct: 194 DFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGER 253
Query: 177 PTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVE 236
P + N ++ IS++E E A C + L + C +
Sbjct: 254 PYWNMTNRDV-----------ISSVE---------EGYRLPAPMGCPHALHQLMLDCWHK 293
Query: 237 SPEQRINAKEIVTKLLKIRDSLLRN 261
QR +IV+ L D+L+R+
Sbjct: 294 DRAQRPRFSQIVSVL----DALIRS 314
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 122/265 (46%), Gaps = 32/265 (12%)
Query: 2 EVAVKVFNLQCG---RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
+V V + L+ G R + F E +M H N+I++ + +V EYM +GS
Sbjct: 77 DVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGS 136
Query: 59 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
L+ +L + + I Q + ++ V + + YL +H DL NVL+D NLV +S
Sbjct: 137 LDTFLRTHDGQFTIMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVS 193
Query: 119 DFGIAKLLIGE-DQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKK 176
DFG++++L + D + T T I + APE S+ DV+SFG+++ E G++
Sbjct: 194 DFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGER 253
Query: 177 PTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVE 236
P + N ++ IS++E E A C + L + C +
Sbjct: 254 PYWNMTNRDV-----------ISSVE---------EGYRLPAPMGCPHALHQLMLDCWHK 293
Query: 237 SPEQRINAKEIVTKLLKIRDSLLRN 261
QR +IV+ L D+L+R+
Sbjct: 294 DRAQRPRFSQIVSVL----DALIRS 314
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 87/163 (53%), Gaps = 12/163 (7%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-----LD 71
+ FD E ++M +H NL++++ S+ + LV YMP+GSL L +C+ L
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL---SCLDGTPPLS 125
Query: 72 IFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQ 131
R I A+ + +LH IH D+K N+LLD+ A +SDFG+A+ Q
Sbjct: 126 WHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 182
Query: 132 SMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTG 174
+ + + T YMAPE R G ++ D+YSFG++L+E TG
Sbjct: 183 XVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG 224
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 122/270 (45%), Gaps = 32/270 (11%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFK--ALVLEYMPHGSLE 60
VAVK + F+ E E++KS++H N++K C + + L++EY+P+GSL
Sbjct: 43 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 102
Query: 61 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
YL +D + L + +EYL + IH +L N+L+++ + DF
Sbjct: 103 DYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRNLATRNILVENENRVKIGDF 159
Query: 121 GIAKLLIGEDQSM-TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT----GK 175
G+ K+L + + + + I + APE E + S DV+SFG++L E FT K
Sbjct: 160 GLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 219
Query: 176 KPTYEFF-------NGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFN 228
P EF G+M + H + L + + + C ++
Sbjct: 220 SPPAEFMRMIGNDKQGQMIVFHLIE---------------LLKNNGRLPRPDGCPDEIYM 264
Query: 229 LAMACTVESPEQRINAKEIVTKLLKIRDSL 258
+ C + QR + +++ ++ +IRD++
Sbjct: 265 IMTECWNNNVNQRPSFRDLALRVDQIRDNM 294
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 16/194 (8%)
Query: 15 AFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQ 74
K F+ E + H+N++ +I ++ LV+EY+ +L +Y+ S+ L +
Sbjct: 54 TLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI-ESHGPLSVDT 112
Query: 75 RLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMT 134
+N + +++ H ++H D+KP N+L+D N + DFGIAK L + S+T
Sbjct: 113 AINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKAL--SETSLT 167
Query: 135 QT-QTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGE----MTLK 189
QT L T+ Y +PE + D+YS GI+L E G+ P FNGE + +K
Sbjct: 168 QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPP----FNGETAVSIAIK 223
Query: 190 HWVNDWLPISTMEV 203
H + D +P T +V
Sbjct: 224 H-IQDSVPNVTTDV 236
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 121/256 (47%), Gaps = 26/256 (10%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
+VAVK+ + + F E + M + H L+K CS E +V EY+ +G L
Sbjct: 34 DVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLN 92
Query: 62 YLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFG 121
YL S L+ Q L + DV + +L S IH DL N L+D +L +SDFG
Sbjct: 93 YLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFG 149
Query: 122 IAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTYE 180
+ + ++ +DQ ++ T + + APE + S+ DV++FGI++ E F+ GK P
Sbjct: 150 MTRYVL-DDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDL 208
Query: 181 FFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQ 240
+ N E+ LK +S + L+ + I + + +C E PE+
Sbjct: 209 YTNSEVVLK--------VSQGHRLYRPHLASDTI------------YQIMYSCWHELPEK 248
Query: 241 RINAKEIVTKLLKIRD 256
R +++++ + +R+
Sbjct: 249 RPTFQQLLSSIEPLRE 264
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 133/282 (47%), Gaps = 38/282 (13%)
Query: 2 EVAVKVFNLQCG---RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
E++V + L+ G + + F E +M H N+I++ + + +V E M +GS
Sbjct: 73 EISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGS 132
Query: 59 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
L+ +L + + Q + ++ +AS ++YL +H DL N+L++ NLV +S
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGAVHRDLAARNILINSNLVCKVS 189
Query: 119 DFGIAKLLIGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKK 176
DFG++++L + ++ T+ I + +PE + ++ DV+S+GI+L E + G++
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 177 PTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVE 236
P +E N ++ ++ VD E C + ++ L + C +
Sbjct: 250 PYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAALYQLMLDCWQK 289
Query: 237 SPEQRINAKEIVTKLLKIRDSLLRNVGGRRI------RQSNL 272
R ++IV+ I D L+RN G +I R SNL
Sbjct: 290 DRNNRPKFEQIVS----ILDKLIRNPGSLKIITSAAARPSNL 327
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 133/282 (47%), Gaps = 38/282 (13%)
Query: 2 EVAVKVFNLQCG---RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
E++V + L+ G + + F E +M H N+I++ + + +V E M +GS
Sbjct: 73 EISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGS 132
Query: 59 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
L+ +L + + Q + ++ +AS ++YL +H DL N+L++ NLV +S
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 189
Query: 119 DFGIAKLLIGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKK 176
DFG++++L + ++ T+ I + +PE + ++ DV+S+GI+L E + G++
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 177 PTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVE 236
P +E N ++ ++ VD E C + ++ L + C +
Sbjct: 250 PYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAALYQLMLDCWQK 289
Query: 237 SPEQRINAKEIVTKLLKIRDSLLRNVGGRRI------RQSNL 272
R ++IV+ I D L+RN G +I R SNL
Sbjct: 290 DRNNRPKFEQIVS----ILDKLIRNPGSLKIITSAAARPSNL 327
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 133/282 (47%), Gaps = 38/282 (13%)
Query: 2 EVAVKVFNLQCG---RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
E++V + L+ G + + F E +M H N+I++ + + +V E M +GS
Sbjct: 44 EISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGS 103
Query: 59 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
L+ +L + + Q + ++ +AS ++YL +H DL N+L++ NLV +S
Sbjct: 104 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 160
Query: 119 DFGIAKLLIGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKK 176
DFG++++L + ++ T+ I + +PE + ++ DV+S+GI+L E + G++
Sbjct: 161 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 220
Query: 177 PTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVE 236
P +E N ++ ++ VD E C + ++ L + C +
Sbjct: 221 PYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAALYQLMLDCWQK 260
Query: 237 SPEQRINAKEIVTKLLKIRDSLLRNVGGRRI------RQSNL 272
R ++IV+ I D L+RN G +I R SNL
Sbjct: 261 DRNNRPKFEQIVS----ILDKLIRNPGSLKIITSAAARPSNL 298
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 103/244 (42%), Gaps = 36/244 (14%)
Query: 19 FDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 78
F E ++K H N++++I C+ ++ +V+E + G +L + L + L +
Sbjct: 159 FLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQM 218
Query: 79 MIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQT 138
+ D A+ +EYL C IH DL N L+ + V +SDFG+++ + +
Sbjct: 219 VGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLR 275
Query: 139 LATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDWLPI 198
+ + APE GR S+ DV+SFGI+L ETF+ Y
Sbjct: 276 QVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPY------------------- 316
Query: 199 STMEVVDANLLSQEDIHFVAK-------EQCVSFVFNLAMACTVESPEQRINAKEIVTKL 251
NL +Q+ FV K E C VF L C P QR + I +L
Sbjct: 317 -------PNLSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQEL 369
Query: 252 LKIR 255
IR
Sbjct: 370 QSIR 373
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS-SNCILDIFQR 75
++F E ++MK +RH L+++ + S E +V EYM GSL +L + L + Q
Sbjct: 48 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-XIVTEYMSKGSLLDFLKGETGKYLRLPQL 106
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
+++ +AS + Y+ +H DL+ N+L+ +NLV ++DFG+A+L+ ED T
Sbjct: 107 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEXTA 161
Query: 136 TQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLME-TFTGKKPTYEFFNGEM 186
Q I + APE GR + DV+SFGI+L E T G+ P N E+
Sbjct: 162 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 214
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 87/164 (53%), Gaps = 11/164 (6%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKA-LVLEYMPHGSLEKYLYS-SNCILDIFQ 74
++F E +M +RH NL++++ E+ +V EYM GSL YL S +L
Sbjct: 44 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 103
Query: 75 RLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMT 134
L +DV A+EYL +H DL NVL+ ++ VA +SDFG+ K + S T
Sbjct: 104 LLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASST 155
Query: 135 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
Q + + APE RE + ST DV+SFGI+L E ++ G+ P
Sbjct: 156 QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 199
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSS-NCILDIFQR 75
++F E ++MK +RH L+++ + S E +V+EYM GSL +L L + Q
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVIEYMSKGSLLDFLKGEMGKYLRLPQL 116
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
+++ +AS + Y+ +H DL+ N+L+ +NLV ++DFG+A+L+ ED T
Sbjct: 117 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEXTA 171
Query: 136 TQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLME-TFTGKKPTYEFFNGEM 186
Q I + APE GR + DV+SFGI+L E T G+ P N E+
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 224
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 87/164 (53%), Gaps = 11/164 (6%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKA-LVLEYMPHGSLEKYLYS-SNCILDIFQ 74
++F E +M +RH NL++++ E+ +V EYM GSL YL S +L
Sbjct: 59 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 118
Query: 75 RLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMT 134
L +DV A+EYL +H DL NVL+ ++ VA +SDFG+ K + S T
Sbjct: 119 LLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASST 170
Query: 135 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
Q + + APE RE + ST DV+SFGI+L E ++ G+ P
Sbjct: 171 QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 214
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 103/244 (42%), Gaps = 36/244 (14%)
Query: 19 FDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 78
F E ++K H N++++I C+ ++ +V+E + G +L + L + L +
Sbjct: 159 FLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQM 218
Query: 79 MIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQT 138
+ D A+ +EYL C IH DL N L+ + V +SDFG+++ + +
Sbjct: 219 VGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLR 275
Query: 139 LATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDWLPI 198
+ + APE GR S+ DV+SFGI+L ETF+ Y
Sbjct: 276 QVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPY------------------- 316
Query: 199 STMEVVDANLLSQEDIHFVAK-------EQCVSFVFNLAMACTVESPEQRINAKEIVTKL 251
NL +Q+ FV K E C VF L C P QR + I +L
Sbjct: 317 -------PNLSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQEL 369
Query: 252 LKIR 255
IR
Sbjct: 370 QSIR 373
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSS-NCILDIFQR 75
++F E ++MK +RH L+++ + S E +V+EYM GSL +L L + Q
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVIEYMSKGSLLDFLKGEMGKYLRLPQL 116
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
+++ +AS + Y+ +H DL+ N+L+ +NLV ++DFG+A+L+ ED T
Sbjct: 117 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTA 171
Query: 136 TQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLME-TFTGKKPTYEFFNGEM 186
Q I + APE GR + DV+SFGI+L E T G+ P N E+
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 224
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 92/173 (53%), Gaps = 9/173 (5%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSS-NCILDIFQR 75
++F E ++MK IRH L+++ + S E +V EYM GSL +L L + Q
Sbjct: 58 EAFLQEAQVMKKIRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQL 116
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
+++ +AS + Y+ +H DL+ N+L+ +NLV ++DFG+A+L+ ED T
Sbjct: 117 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTA 171
Query: 136 TQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLME-TFTGKKPTYEFFNGEM 186
Q I + APE GR + DV+SFGI+L E T G+ P N E+
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 224
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS-SNCILDIFQR 75
++F E ++MK +RH L+++ + S E +V EYM GSL +L + L + Q
Sbjct: 51 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQL 109
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
+++ +AS + Y+ +H DL+ N+L+ +NLV ++DFG+A+L+ ED T
Sbjct: 110 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTA 164
Query: 136 TQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLME-TFTGKKPTYEFFNGEM 186
Q I + APE GR + DV+SFGI+L E T G+ P N E+
Sbjct: 165 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 217
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 87/164 (53%), Gaps = 11/164 (6%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKA-LVLEYMPHGSLEKYLYS-SNCILDIFQ 74
++F E +M +RH NL++++ E+ +V EYM GSL YL S +L
Sbjct: 231 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 290
Query: 75 RLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMT 134
L +DV A+EYL +H DL NVL+ ++ VA +SDFG+ K + S T
Sbjct: 291 LLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASST 342
Query: 135 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
Q + + APE RE + ST DV+SFGI+L E ++ G+ P
Sbjct: 343 QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 386
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 86/164 (52%), Gaps = 11/164 (6%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKA-LVLEYMPHGSLEKYLYS-SNCILDIFQ 74
++F E +M +RH NL++++ E+ +V EYM GSL YL S +L
Sbjct: 50 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 109
Query: 75 RLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMT 134
L +DV A+EYL +H DL NVL+ ++ VA +SDFG+ K + S T
Sbjct: 110 LLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASST 161
Query: 135 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
Q + + APE RE ST DV+SFGI+L E ++ G+ P
Sbjct: 162 QDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVP 205
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS-SNCILDIFQR 75
++F E ++MK +RH L+++ + S E +V EYM GSL +L + L + Q
Sbjct: 55 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQL 113
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
+++ +AS + Y+ +H DL+ N+L+ +NLV ++DFG+A+L+ ED T
Sbjct: 114 VDMSAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEWTA 168
Query: 136 TQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLME-TFTGKKPTYEFFNGEM 186
Q I + APE GR + DV+SFGI+L E T G+ P N E+
Sbjct: 169 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 221
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS-SNCILDIFQR 75
++F E ++MK +RH L+++ + S E +V EYM GSL +L + L + Q
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQL 282
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
+++ +AS + Y+ +H DL+ N+L+ +NLV ++DFG+A+L+ ED T
Sbjct: 283 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTA 337
Query: 136 TQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLME-TFTGKKPTYEFFNGEM 186
Q I + APE GR + DV+SFGI+L E T G+ P N E+
Sbjct: 338 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 390
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS-SNCILDIFQR 75
++F E ++MK +RH L+++ + S E +V EYM GSL +L + L + Q
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQL 282
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
+++ +AS + Y+ +H DL+ N+L+ +NLV ++DFG+A+L+ ED T
Sbjct: 283 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTA 337
Query: 136 TQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLME-TFTGKKPTYEFFNGEM 186
Q I + APE GR + DV+SFGI+L E T G+ P N E+
Sbjct: 338 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 390
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 92/173 (53%), Gaps = 9/173 (5%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSS-NCILDIFQR 75
++F E ++MK +RH L+++ + S E +V EYM GSL +L L + Q
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQL 116
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
+++ +AS + Y+ +H DL+ N+L+ +NLV ++DFG+A+L+ ED T
Sbjct: 117 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTA 171
Query: 136 TQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLME-TFTGKKPTYEFFNGEM 186
Q I + APE GR + DV+SFGI+L E T G+ P N E+
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 224
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 92/173 (53%), Gaps = 9/173 (5%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSS-NCILDIFQR 75
++F E ++MK +RH L+++ + S E +V EYM GSL +L L + Q
Sbjct: 49 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQL 107
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
+++ +AS + Y+ +H DL+ N+L+ +NLV ++DFG+A+L+ ED T
Sbjct: 108 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTA 162
Query: 136 TQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLME-TFTGKKPTYEFFNGEM 186
Q I + APE GR + DV+SFGI+L E T G+ P N E+
Sbjct: 163 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 215
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 92/173 (53%), Gaps = 9/173 (5%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSS-NCILDIFQR 75
++F E ++MK +RH L+++ + S E +V EYM GSL +L L + Q
Sbjct: 47 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQL 105
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
+++ +AS + Y+ +H DL+ N+L+ +NLV ++DFG+A+L+ ED T
Sbjct: 106 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTA 160
Query: 136 TQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLME-TFTGKKPTYEFFNGEM 186
Q I + APE GR + DV+SFGI+L E T G+ P N E+
Sbjct: 161 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 213
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS-SNCILDIFQR 75
++F E ++MK +RH L+++ + S E +V EYM GSL +L + L + Q
Sbjct: 55 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQL 113
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
+++ +AS + Y+ +H DL+ N+L+ +NLV ++DFG+A+L+ ED T
Sbjct: 114 VDMSAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTA 168
Query: 136 TQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLME-TFTGKKPTYEFFNGEM 186
Q I + APE GR + DV+SFGI+L E T G+ P N E+
Sbjct: 169 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 221
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS-SNCILDIFQR 75
++F E ++MK +RH L+++ + S E +V EYM GSL +L + L + Q
Sbjct: 307 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQL 365
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
+++ +AS + Y+ +H DL+ N+L+ +NLV ++DFG+A+L+ ED T
Sbjct: 366 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTA 420
Query: 136 TQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLME-TFTGKKPTYEFFNGEM 186
Q I + APE GR + DV+SFGI+L E T G+ P N E+
Sbjct: 421 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 473
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 92/173 (53%), Gaps = 9/173 (5%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSS-NCILDIFQR 75
++F E ++MK +RH L+++ + S E +V EYM GSL +L L + Q
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVCEYMSKGSLLDFLKGEMGKYLRLPQL 116
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
+++ +AS + Y+ +H DL+ N+L+ +NLV ++DFG+A+L+ ED T
Sbjct: 117 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTA 171
Query: 136 TQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLME-TFTGKKPTYEFFNGEM 186
Q I + APE GR + DV+SFGI+L E T G+ P N E+
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 224
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 91/181 (50%), Gaps = 9/181 (4%)
Query: 2 EVAVKVFNL--QCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
+VAVK+ + F++F E +++ RH N++ + + + A+V ++ SL
Sbjct: 60 DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNL-AIVTQWCEGSSL 118
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
K+L+ +FQ ++I A ++YLH + +IH D+K +N+ L + L + D
Sbjct: 119 YKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGD 175
Query: 120 FGIAKLLIGEDQSMTQTQTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLMETFTGKK 176
FG+A + S Q ++ +MAPE R S DVYS+GI+L E TG+
Sbjct: 176 FGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGEL 235
Query: 177 P 177
P
Sbjct: 236 P 236
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS-SNCILDIFQR 75
++F E ++MK +RH L+++ + S E +V EYM GSL +L + L + Q
Sbjct: 224 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVGEYMSKGSLLDFLKGETGKYLRLPQL 282
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
+++ +AS + Y+ +H DL+ N+L+ +NLV ++DFG+A+L+ ED T
Sbjct: 283 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTA 337
Query: 136 TQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLME-TFTGKKPTYEFFNGEM 186
Q I + APE GR + DV+SFGI+L E T G+ P N E+
Sbjct: 338 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 390
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 92/173 (53%), Gaps = 9/173 (5%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSS-NCILDIFQR 75
++F E ++MK +RH L+++ + S E +V+EYM G L +L L + Q
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVMEYMSKGCLLDFLKGEMGKYLRLPQL 116
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
+++ +AS + Y+ +H DL+ N+L+ +NLV ++DFG+A+L+ ED T
Sbjct: 117 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTA 171
Query: 136 TQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLME-TFTGKKPTYEFFNGEM 186
Q I + APE GR + DV+SFGI+L E T G+ P N E+
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 224
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 9/173 (5%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSS-NCILDIFQR 75
++F E ++MK +RH L+++ + S E +V EYM GSL +L L + Q
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQL 116
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
+++ +AS + Y+ +H DL N+L+ +NLV ++DFG+A+L+ ED T
Sbjct: 117 VDMAAQIASGMAYVE---RMNYVHRDLAAANILVGENLVCKVADFGLARLI--EDNEYTA 171
Query: 136 TQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLME-TFTGKKPTYEFFNGEM 186
Q I + APE GR + DV+SFGI+L E T G+ P N E+
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 224
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 85/163 (52%), Gaps = 12/163 (7%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-----LD 71
+ FD E ++ +H NL++++ S+ + LV Y P+GSL L +C+ L
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL---SCLDGTPPLS 122
Query: 72 IFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQ 131
R I A+ + +LH IH D+K N+LLD+ A +SDFG+A+ Q
Sbjct: 123 WHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 179
Query: 132 SMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTG 174
+ ++ + T Y APE R G ++ D+YSFG++L+E TG
Sbjct: 180 XVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITG 221
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 91/173 (52%), Gaps = 9/173 (5%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSS-NCILDIFQR 75
++F E ++MK +RH L+++ + S E +V EYM GSL +L L + Q
Sbjct: 225 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQL 283
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
+++ +AS + Y+ +H DL+ N+L+ +NLV ++DFG+ +L+ ED T
Sbjct: 284 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLGRLI--EDNEYTA 338
Query: 136 TQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLME-TFTGKKPTYEFFNGEM 186
Q I + APE GR + DV+SFGI+L E T G+ P N E+
Sbjct: 339 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 391
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 125/273 (45%), Gaps = 34/273 (12%)
Query: 2 EVAVKVFNLQCG---RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
E V + L+ G R + F E +M H N+I++ +N ++ E+M +G+
Sbjct: 44 ESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGA 103
Query: 59 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
L+ +L ++ + Q + ++ +AS + YL +H DL N+L++ NLV +S
Sbjct: 104 LDSFLRLNDGQFTVIQLVGMLRGIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVS 160
Query: 119 DFGIAKLLIGEDQSMTQTQTLA---TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-G 174
DFG+++ L T+T +L I + APE + ++ D +S+GI++ E + G
Sbjct: 161 DFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFG 220
Query: 175 KKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACT 234
++P ++ +S +V++A ++D C + + L + C
Sbjct: 221 ERPYWD-----------------MSNQDVINA---IEQDYRLPPPPDCPTSLHQLMLDCW 260
Query: 235 VESPEQRINAKEIVTKLLKIRDSLLRNVGGRRI 267
+ R ++V+ L D ++RN +I
Sbjct: 261 QKDRNARPRFPQVVSAL----DKMIRNPASLKI 289
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 91/173 (52%), Gaps = 9/173 (5%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSS-NCILDIFQR 75
++F E ++MK +RH L+++ + S E +V EYM G L +L L + Q
Sbjct: 58 EAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGCLLDFLKGEMGKYLRLPQL 116
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
+++ +AS + Y+ +H DL+ N+L+ +NLV ++DFG+A+L+ ED T
Sbjct: 117 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTA 171
Query: 136 TQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLME-TFTGKKPTYEFFNGEM 186
Q I + APE GR + DV+SFGI+L E T G+ P N E+
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 224
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 111/242 (45%), Gaps = 28/242 (11%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
+VAVK Q + +F E +MK ++H+ L+++ + + E ++ EYM +GSL
Sbjct: 39 KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVD 96
Query: 62 YLYSSNCI-LDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
+L + + I L I + L++ +A + ++ IH DL+ N+L+ D L ++DF
Sbjct: 97 FLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADF 153
Query: 121 GIAKLLIGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
G+A+L+ ED T + I + APE G + DV+SFGI+L E T + Y
Sbjct: 154 GLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 211
Query: 180 EFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPE 239
P T V NL + V + C ++ L C E PE
Sbjct: 212 -----------------PGMTNPEVIQNL--ERGYRMVRPDNCPEELYQLMRLCWKERPE 252
Query: 240 QR 241
R
Sbjct: 253 DR 254
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 14/164 (8%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++ ++H N+I + C E LV+E+ G L + L DI +N +
Sbjct: 56 EAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDIL--VNWAVQ 113
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLD--------DNLVAYLSDFGIAKLLIGEDQSM 133
+A + YLH P+IH DLK N+L+ N + ++DFG+A+ E
Sbjct: 114 IARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR----EWHRT 169
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
T+ +MAPE R S DV+S+G++L E TG+ P
Sbjct: 170 TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 111/242 (45%), Gaps = 28/242 (11%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
+VAVK Q + +F E +MK ++H+ L+++ + + E ++ EYM +GSL
Sbjct: 40 KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVD 97
Query: 62 YLYSSNCI-LDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
+L + + I L I + L++ +A + ++ IH DL+ N+L+ D L ++DF
Sbjct: 98 FLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADF 154
Query: 121 GIAKLLIGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
G+A+L+ ED T + I + APE G + DV+SFGI+L E T + Y
Sbjct: 155 GLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 212
Query: 180 EFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPE 239
P T V NL + V + C ++ L C E PE
Sbjct: 213 -----------------PGMTNPEVIQNL--ERGYRMVRPDNCPEELYQLMRLCWKERPE 253
Query: 240 QR 241
R
Sbjct: 254 DR 255
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 111/242 (45%), Gaps = 28/242 (11%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
+VAVK Q + +F E +MK ++H+ L+++ + + E ++ EYM +GSL
Sbjct: 41 KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVD 98
Query: 62 YLYSSNCI-LDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
+L + + I L I + L++ +A + ++ IH DL+ N+L+ D L ++DF
Sbjct: 99 FLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADF 155
Query: 121 GIAKLLIGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
G+A+L+ ED T + I + APE G + DV+SFGI+L E T + Y
Sbjct: 156 GLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 213
Query: 180 EFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPE 239
P T V NL + V + C ++ L C E PE
Sbjct: 214 -----------------PGMTNPEVIQNL--ERGYRMVRPDNCPEELYQLMRLCWKERPE 254
Query: 240 QR 241
R
Sbjct: 255 DR 256
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 122/267 (45%), Gaps = 34/267 (12%)
Query: 2 EVAVKVFNLQCG---RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
E+ V + L+ G + + F E +M H N+I + + ++ E+M +GS
Sbjct: 61 EIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGS 120
Query: 59 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
L+ +L ++ + Q + ++ +A+ ++YL +H DL N+L++ NLV +S
Sbjct: 121 LDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVS 177
Query: 119 DFGIAKLLIGEDQSMTQTQTLA---TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-G 174
DFG+++ L + T T L I + APE + + ++ DV+S+GI++ E + G
Sbjct: 178 DFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYG 237
Query: 175 KKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACT 234
++P ++ N +V++A ++D C S + L + C
Sbjct: 238 ERPYWDMTN-----------------QDVINA---IEQDYRLPPPMDCPSALHQLMLDCW 277
Query: 235 VESPEQRINAKEIVTKLLKIRDSLLRN 261
+ R +IV L D ++RN
Sbjct: 278 QKDRNHRPKFGQIVNTL----DKMIRN 300
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 111/242 (45%), Gaps = 28/242 (11%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
+VAVK Q + +F E +MK ++H+ L+++ + + E ++ EYM +GSL
Sbjct: 45 KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVD 102
Query: 62 YLYSSNCI-LDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
+L + + I L I + L++ +A + ++ IH DL+ N+L+ D L ++DF
Sbjct: 103 FLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADF 159
Query: 121 GIAKLLIGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
G+A+L+ ED T + I + APE G + DV+SFGI+L E T + Y
Sbjct: 160 GLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 217
Query: 180 EFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPE 239
P T V NL + V + C ++ L C E PE
Sbjct: 218 -----------------PGMTNPEVIQNL--ERGYRMVRPDNCPEELYQLMRLCWKERPE 258
Query: 240 QR 241
R
Sbjct: 259 DR 260
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 111/242 (45%), Gaps = 28/242 (11%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
+VAVK Q + +F E +MK ++H+ L+++ + + E ++ EYM +GSL
Sbjct: 44 KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVD 101
Query: 62 YLYSSNCI-LDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
+L + + I L I + L++ +A + ++ IH DL+ N+L+ D L ++DF
Sbjct: 102 FLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADF 158
Query: 121 GIAKLLIGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
G+A+L+ ED T + I + APE G + DV+SFGI+L E T + Y
Sbjct: 159 GLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 216
Query: 180 EFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPE 239
P T V NL + V + C ++ L C E PE
Sbjct: 217 -----------------PGMTNPEVIQNL--ERGYRMVRPDNCPEELYQLMRLCWKERPE 257
Query: 240 QR 241
R
Sbjct: 258 DR 259
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNC-ILDIFQR 75
+ F E +MK I+H NL++++ C+ E +V EYMP+G+L YL N +
Sbjct: 73 EEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVL 132
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
L + ++SA+EYL IH DL N L+ +N V ++DFG+++L+ G D
Sbjct: 133 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTG-DTYTAH 188
Query: 136 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTYEFFNGEMTLKHWVND 194
I + APE S DV++FG++L E T G P + G
Sbjct: 189 AGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSP----YPG---------- 234
Query: 195 WLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKE 246
I +V D L ++ E C V+ L AC SP R + E
Sbjct: 235 ---IDLSQVYD---LLEKGYRMEQPEGCPPKVYELMRACWKWSPADRPSFAE 280
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 111/242 (45%), Gaps = 28/242 (11%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
+VAVK Q + +F E +MK ++H+ L+++ + + E ++ EYM +GSL
Sbjct: 39 KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVD 96
Query: 62 YLYSSNCI-LDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
+L + + I L I + L++ +A + ++ IH DL+ N+L+ D L ++DF
Sbjct: 97 FLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADF 153
Query: 121 GIAKLLIGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
G+A+L+ ED T + I + APE G + DV+SFGI+L E T + Y
Sbjct: 154 GLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 211
Query: 180 EFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPE 239
P T V NL + V + C ++ L C E PE
Sbjct: 212 -----------------PGMTNPEVIQNL--ERGYRMVRPDNCPEELYQLMRLCWKERPE 252
Query: 240 QR 241
R
Sbjct: 253 DR 254
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 111/242 (45%), Gaps = 28/242 (11%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
+VAVK Q + +F E +MK ++H+ L+++ + + E ++ EYM +GSL
Sbjct: 47 KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVD 104
Query: 62 YLYSSNCI-LDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
+L + + I L I + L++ +A + ++ IH DL+ N+L+ D L ++DF
Sbjct: 105 FLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADF 161
Query: 121 GIAKLLIGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
G+A+L+ ED T + I + APE G + DV+SFGI+L E T + Y
Sbjct: 162 GLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 219
Query: 180 EFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPE 239
P T V NL + V + C ++ L C E PE
Sbjct: 220 -----------------PGMTNPEVIQNL--ERGYRMVRPDNCPEELYQLMRLCWKERPE 260
Query: 240 QR 241
R
Sbjct: 261 DR 262
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 111/242 (45%), Gaps = 28/242 (11%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
+VAVK Q + +F E +MK ++H+ L+++ + + E ++ EYM +GSL
Sbjct: 45 KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVD 102
Query: 62 YLYSSNCI-LDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
+L + + I L I + L++ +A + ++ IH DL+ N+L+ D L ++DF
Sbjct: 103 FLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADF 159
Query: 121 GIAKLLIGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
G+A+L+ ED T + I + APE G + DV+SFGI+L E T + Y
Sbjct: 160 GLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 217
Query: 180 EFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPE 239
P T V NL + V + C ++ L C E PE
Sbjct: 218 -----------------PGMTNPEVIQNL--ERGYRMVRPDNCPEELYQLMRLCWKERPE 258
Query: 240 QR 241
R
Sbjct: 259 DR 260
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 111/242 (45%), Gaps = 28/242 (11%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
+VAVK Q + +F E +MK ++H+ L+++ + + E ++ EYM +GSL
Sbjct: 39 KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVD 96
Query: 62 YLYSSNCI-LDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
+L + + I L I + L++ +A + ++ IH DL+ N+L+ D L ++DF
Sbjct: 97 FLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADF 153
Query: 121 GIAKLLIGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
G+A+L+ ED T + I + APE G + DV+SFGI+L E T + Y
Sbjct: 154 GLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 211
Query: 180 EFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPE 239
P T V NL + V + C ++ L C E PE
Sbjct: 212 -----------------PGMTNPEVIQNL--ERGYRMVRPDNCPEELYQLMRLCWKERPE 252
Query: 240 QR 241
R
Sbjct: 253 DR 254
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 111/242 (45%), Gaps = 28/242 (11%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
+VAVK Q + +F E +MK ++H+ L+++ + + E ++ EYM +GSL
Sbjct: 34 KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVD 91
Query: 62 YLYSSNCI-LDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
+L + + I L I + L++ +A + ++ IH DL+ N+L+ D L ++DF
Sbjct: 92 FLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADF 148
Query: 121 GIAKLLIGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
G+A+L+ ED T + I + APE G + DV+SFGI+L E T + Y
Sbjct: 149 GLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 206
Query: 180 EFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPE 239
P T V NL + V + C ++ L C E PE
Sbjct: 207 -----------------PGMTNPEVIQNL--ERGYRMVRPDNCPEELYQLMRLCWKERPE 247
Query: 240 QR 241
R
Sbjct: 248 DR 249
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 111/242 (45%), Gaps = 28/242 (11%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
+VAVK Q + +F E +MK ++H+ L+++ + + E ++ EYM +GSL
Sbjct: 48 KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVD 105
Query: 62 YLYSSNCI-LDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
+L + + I L I + L++ +A + ++ IH DL+ N+L+ D L ++DF
Sbjct: 106 FLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADF 162
Query: 121 GIAKLLIGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
G+A+L+ ED T + I + APE G + DV+SFGI+L E T + Y
Sbjct: 163 GLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 220
Query: 180 EFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPE 239
P T V NL + V + C ++ L C E PE
Sbjct: 221 -----------------PGMTNPEVIQNL--ERGYRMVRPDNCPEELYQLMRLCWKERPE 261
Query: 240 QR 241
R
Sbjct: 262 DR 263
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 111/242 (45%), Gaps = 28/242 (11%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
+VAVK Q + +F E +MK ++H+ L+++ + + E ++ EYM +GSL
Sbjct: 39 KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVD 96
Query: 62 YLYSSNCI-LDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
+L + + I L I + L++ +A + ++ IH DL+ N+L+ D L ++DF
Sbjct: 97 FLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADF 153
Query: 121 GIAKLLIGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
G+A+L+ ED T + I + APE G + DV+SFGI+L E T + Y
Sbjct: 154 GLARLI--EDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 211
Query: 180 EFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPE 239
P T V NL + V + C ++ L C E PE
Sbjct: 212 -----------------PGMTNPEVIQNL--ERGYRMVRPDNCPEELYQLMRLCWKERPE 252
Query: 240 QR 241
R
Sbjct: 253 DR 254
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 111/242 (45%), Gaps = 28/242 (11%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
+VAVK Q + +F E +MK ++H+ L+++ + + E ++ EYM +GSL
Sbjct: 49 KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVD 106
Query: 62 YLYSSNCI-LDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
+L + + I L I + L++ +A + ++ IH DL+ N+L+ D L ++DF
Sbjct: 107 FLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADF 163
Query: 121 GIAKLLIGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
G+A+L+ ED T + I + APE G + DV+SFGI+L E T + Y
Sbjct: 164 GLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 221
Query: 180 EFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPE 239
P T V NL + V + C ++ L C E PE
Sbjct: 222 -----------------PGMTNPEVIQNL--ERGYRMVRPDNCPEELYQLMRLCWKERPE 262
Query: 240 QR 241
R
Sbjct: 263 DR 264
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 104/232 (44%), Gaps = 24/232 (10%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQR 75
+ F E +MK I+H NL++++ C+ E +++E+M +G+L YL N ++
Sbjct: 55 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL 114
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
L + ++SA+EYL IH DL N L+ +N + ++DFG+++L+ G D
Sbjct: 115 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAH 170
Query: 136 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDW 195
I + APE + S DV++FG++L E T
Sbjct: 171 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS------------------ 212
Query: 196 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEI 247
P +++ L ++D E C V+ L AC +P R + EI
Sbjct: 213 -PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 124/273 (45%), Gaps = 34/273 (12%)
Query: 2 EVAVKVFNLQCG---RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
E V + L+ G R + F E +M H N+I++ +N ++ E+M +G+
Sbjct: 42 ESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGA 101
Query: 59 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
L+ +L ++ + Q + ++ +AS + YL +H DL N+L++ NLV +S
Sbjct: 102 LDSFLRLNDGQFTVIQLVGMLRGIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVS 158
Query: 119 DFGIAKLLIGEDQSMTQTQTLA---TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-G 174
DFG+++ L T T +L I + APE + ++ D +S+GI++ E + G
Sbjct: 159 DFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFG 218
Query: 175 KKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACT 234
++P ++ +S +V++A ++D C + + L + C
Sbjct: 219 ERPYWD-----------------MSNQDVINA---IEQDYRLPPPPDCPTSLHQLMLDCW 258
Query: 235 VESPEQRINAKEIVTKLLKIRDSLLRNVGGRRI 267
+ R ++V+ L D ++RN +I
Sbjct: 259 QKDRNARPRFPQVVSAL----DKMIRNPASLKI 287
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 104/232 (44%), Gaps = 24/232 (10%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQR 75
+ F E +MK I+H NL++++ C+ E +++E+M +G+L YL N ++
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
L + ++SA+EYL IH DL N L+ +N + ++DFG+++L+ G D
Sbjct: 119 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAH 174
Query: 136 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDW 195
I + APE + S DV++FG++L E T
Sbjct: 175 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS------------------ 216
Query: 196 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEI 247
P +++ L ++D E C V+ L AC +P R + EI
Sbjct: 217 -PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 104/232 (44%), Gaps = 24/232 (10%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQR 75
+ F E +MK I+H NL++++ C+ E +++E+M +G+L YL N +
Sbjct: 52 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL 111
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
L + ++SA+EYL IH DL N L+ +N + ++DFG+++L+ G D
Sbjct: 112 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAH 167
Query: 136 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDW 195
I + APE + S DV++FG++L E T Y +
Sbjct: 168 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID------------ 215
Query: 196 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEI 247
P E++ ++D E C V+ L AC +P R + EI
Sbjct: 216 -PSQVYELL------EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 124/265 (46%), Gaps = 32/265 (12%)
Query: 2 EVAVKVFNLQCG---RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
E+ V + L+ G + + F E +M H N+I + + + +V EYM +GS
Sbjct: 50 ELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGS 109
Query: 59 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
L+ +L ++ + Q + ++ +++ ++YL +H DL N+L++ NLV +S
Sbjct: 110 LDTFLKKNDGQFTVIQLVGMLRGISAGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 166
Query: 119 DFGIAKLLIGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKK 176
DFG++++L + ++ T+ I + APE + ++ DV+S+GI++ E + G++
Sbjct: 167 DFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGER 226
Query: 177 PTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVE 236
P +E N +V+ A +E + C + ++ L + C +
Sbjct: 227 PYWEMTN-----------------QDVIKA---VEEGYRLPSPMDCPAALYQLMLDCWQK 266
Query: 237 SPEQRINAKEIVTKLLKIRDSLLRN 261
R EIV L D L+RN
Sbjct: 267 ERNSRPKFDEIVNML----DKLIRN 287
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 100/200 (50%), Gaps = 19/200 (9%)
Query: 3 VAVKVFNLQCGRAFKS-FDVECEMMKSIRHRNLIKVISSCSNEEFKAL--VLEYMPHGSL 59
VAVK CG +S + E ++++++ H ++IK C ++ K+L V+EY+P GSL
Sbjct: 46 VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL 105
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
YL + + + Q L + + YLH S IH +L NVLLD++ + + D
Sbjct: 106 RDYLPRHS--IGLAQLLLFAQQICEGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGD 160
Query: 120 FGIAKLLI-GEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT----G 174
FG+AK + G + + + + + APE +E + DV+SFG+ L E T
Sbjct: 161 FGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSS 220
Query: 175 KKPTYEFF------NGEMTL 188
+ P +F G+MT+
Sbjct: 221 QSPPTKFLELIGIAQGQMTV 240
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 89/176 (50%), Gaps = 8/176 (4%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNC-ILDIFQR 75
+SF E ++MK ++H L+++ + S E +V EYM GSL +L L +
Sbjct: 49 ESFLEEAQIMKKLKHDKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKDGEGRALKLPNL 107
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
+++ VA+ + Y+ IH DL+ N+L+ + L+ ++DFG+A+L+ ED T
Sbjct: 108 VDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGNGLICKIADFGLARLI--EDNEXTA 162
Query: 136 TQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKH 190
Q I + APE GR + DV+SFGI+L E T + Y N L+
Sbjct: 163 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQ 218
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 119/255 (46%), Gaps = 24/255 (9%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
+VA+K+ + + F E ++M ++ H L+++ C+ + ++ EYM +G L
Sbjct: 50 DVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 108
Query: 62 YLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFG 121
YL Q L + DV A+EYL S +H DL N L++D V +SDFG
Sbjct: 109 YLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFG 165
Query: 122 IAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEF 181
+++ ++ +D+ + + + + PE + S+ D+++FG+++ E ++ K YE
Sbjct: 166 LSRYVL-DDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 224
Query: 182 FNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQR 241
F T +H + + +L S++ V+ + +C E ++R
Sbjct: 225 FTNSETAEHIAQG------LRLYRPHLASEK-------------VYTIMYSCWHEKADER 265
Query: 242 INAKEIVTKLLKIRD 256
K +++ +L + D
Sbjct: 266 PTFKILLSNILDVMD 280
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 103/232 (44%), Gaps = 24/232 (10%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQR 75
+ F E +MK I+H NL++++ C+ E +++E+M +G+L YL N +
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
L + ++SA+EYL IH DL N L+ +N + ++DFG+++L+ G D
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAH 169
Query: 136 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDW 195
I + APE + S DV++FG++L E T
Sbjct: 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS------------------ 211
Query: 196 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEI 247
P +++ L ++D E C V+ L AC +P R + EI
Sbjct: 212 -PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 91/175 (52%), Gaps = 9/175 (5%)
Query: 3 VAVKVFNLQCGRAFKS-FDVECEMMKSIRHRNLIKVISSCSNEEFKA--LVLEYMPHGSL 59
VAVK CG +S + E E+++++ H +++K C ++ K+ LV+EY+P GSL
Sbjct: 41 VAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSL 100
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
YL +C+ + Q L + + YLH + IH L NVLLD++ + + D
Sbjct: 101 RDYL-PRHCV-GLAQLLLFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGD 155
Query: 120 FGIAKLLI-GEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 173
FG+AK + G + + + + + APE +E + DV+SFG+ L E T
Sbjct: 156 FGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 103/232 (44%), Gaps = 24/232 (10%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQR 75
+ F E +MK I+H NL++++ C+ E ++ E+M +G+L YL N ++
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 113
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
L + ++SA+EYL IH DL N L+ +N + ++DFG+++L+ G D
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAH 169
Query: 136 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDW 195
I + APE + S DV++FG++L E T
Sbjct: 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS------------------ 211
Query: 196 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEI 247
P +++ L ++D E C V+ L AC +P R + EI
Sbjct: 212 -PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 91/175 (52%), Gaps = 9/175 (5%)
Query: 3 VAVKVFNLQCGRAFKS-FDVECEMMKSIRHRNLIKVISSCSNEEFKA--LVLEYMPHGSL 59
VAVK CG +S + E E+++++ H +++K C ++ K+ LV+EY+P GSL
Sbjct: 40 VAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSL 99
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
YL +C+ + Q L + + YLH + IH L NVLLD++ + + D
Sbjct: 100 RDYL-PRHCV-GLAQLLLFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGD 154
Query: 120 FGIAKLLI-GEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 173
FG+AK + G + + + + + APE +E + DV+SFG+ L E T
Sbjct: 155 FGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 103/232 (44%), Gaps = 24/232 (10%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQR 75
+ F E +MK I+H NL++++ C+ E ++ E+M +G+L YL N ++
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
L + ++SA+EYL IH DL N L+ +N + ++DFG+++L+ G D
Sbjct: 119 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAH 174
Query: 136 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDW 195
I + APE + S DV++FG++L E T
Sbjct: 175 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS------------------ 216
Query: 196 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEI 247
P +++ L ++D E C V+ L AC +P R + EI
Sbjct: 217 -PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 103/232 (44%), Gaps = 24/232 (10%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQR 75
+ F E +MK I+H NL++++ C+ E +++E+M +G+L YL N +
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
L + ++SA+EYL IH DL N L+ +N + ++DFG+++L+ G D
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAH 169
Query: 136 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDW 195
I + APE + S DV++FG++L E T
Sbjct: 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS------------------ 211
Query: 196 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEI 247
P +++ L ++D E C V+ L AC +P R + EI
Sbjct: 212 -PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 119/255 (46%), Gaps = 24/255 (9%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
+VA+K+ + + F E ++M ++ H L+++ C+ + ++ EYM +G L
Sbjct: 34 DVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 92
Query: 62 YLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFG 121
YL Q L + DV A+EYL S +H DL N L++D V +SDFG
Sbjct: 93 YLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFG 149
Query: 122 IAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEF 181
+++ ++ +D+ + + + + PE + S+ D+++FG+++ E ++ K YE
Sbjct: 150 LSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 208
Query: 182 FNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQR 241
F T +H + + +L S++ V+ + +C E ++R
Sbjct: 209 FTNSETAEHIAQG------LRLYRPHLASEK-------------VYTIMYSCWHEKADER 249
Query: 242 INAKEIVTKLLKIRD 256
K +++ +L + D
Sbjct: 250 PTFKILLSNILDVMD 264
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 119/255 (46%), Gaps = 24/255 (9%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
+VA+K+ + + F E ++M ++ H L+++ C+ + ++ EYM +G L
Sbjct: 35 DVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 93
Query: 62 YLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFG 121
YL Q L + DV A+EYL S +H DL N L++D V +SDFG
Sbjct: 94 YLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFG 150
Query: 122 IAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEF 181
+++ ++ +D+ + + + + PE + S+ D+++FG+++ E ++ K YE
Sbjct: 151 LSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 209
Query: 182 FNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQR 241
F T +H + + +L S++ V+ + +C E ++R
Sbjct: 210 FTNSETAEHIAQG------LRLYRPHLASEK-------------VYTIMYSCWHEKADER 250
Query: 242 INAKEIVTKLLKIRD 256
K +++ +L + D
Sbjct: 251 PTFKILLSNILDVMD 265
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 103/232 (44%), Gaps = 24/232 (10%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQR 75
+ F E +MK I+H NL++++ C+ E ++ E+M +G+L YL N +
Sbjct: 52 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 111
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
L + ++SA+EYL IH DL N L+ +N + ++DFG+++L+ G D
Sbjct: 112 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAH 167
Query: 136 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDW 195
I + APE + S DV++FG++L E T Y +
Sbjct: 168 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID------------ 215
Query: 196 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEI 247
P E++ ++D E C V+ L AC +P R + EI
Sbjct: 216 -PSQVYELL------EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 103/232 (44%), Gaps = 24/232 (10%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQR 75
+ F E +MK I+H NL++++ C+ E ++ E+M +G+L YL N ++
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 113
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
L + ++SA+EYL IH DL N L+ +N + ++DFG+++L+ G D
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAH 169
Query: 136 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDW 195
I + APE + S DV++FG++L E T
Sbjct: 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS------------------ 211
Query: 196 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEI 247
P +++ L ++D E C V+ L AC +P R + EI
Sbjct: 212 -PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 119/255 (46%), Gaps = 24/255 (9%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
+VA+K+ + + F E ++M ++ H L+++ C+ + ++ EYM +G L
Sbjct: 35 DVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 93
Query: 62 YLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFG 121
YL Q L + DV A+EYL S +H DL N L++D V +SDFG
Sbjct: 94 YLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFG 150
Query: 122 IAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEF 181
+++ ++ +D+ + + + + PE + S+ D+++FG+++ E ++ K YE
Sbjct: 151 LSRYVL-DDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 209
Query: 182 FNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQR 241
F T +H + + +L S++ V+ + +C E ++R
Sbjct: 210 FTNSETAEHIAQG------LRLYRPHLASEK-------------VYTIMYSCWHEKADER 250
Query: 242 INAKEIVTKLLKIRD 256
K +++ +L + D
Sbjct: 251 PTFKILLSNILDVMD 265
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 119/255 (46%), Gaps = 24/255 (9%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
+VA+K+ + + F E ++M ++ H L+++ C+ + ++ EYM +G L
Sbjct: 30 DVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 88
Query: 62 YLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFG 121
YL Q L + DV A+EYL S +H DL N L++D V +SDFG
Sbjct: 89 YLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFG 145
Query: 122 IAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEF 181
+++ ++ +D+ + + + + PE + S+ D+++FG+++ E ++ K YE
Sbjct: 146 LSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 204
Query: 182 FNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQR 241
F T +H + + +L S++ V+ + +C E ++R
Sbjct: 205 FTNSETAEHIAQG------LRLYRPHLASEK-------------VYTIMYSCWHEKADER 245
Query: 242 INAKEIVTKLLKIRD 256
K +++ +L + D
Sbjct: 246 PTFKILLSNILDVMD 260
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 103/232 (44%), Gaps = 24/232 (10%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQR 75
+ F E +MK I+H NL++++ C+ E ++ E+M +G+L YL N ++
Sbjct: 58 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 117
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
L + ++SA+EYL IH DL N L+ +N + ++DFG+++L+ G D
Sbjct: 118 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAH 173
Query: 136 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDW 195
I + APE + S DV++FG++L E T
Sbjct: 174 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS------------------ 215
Query: 196 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEI 247
P +++ L ++D E C V+ L AC +P R + EI
Sbjct: 216 -PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 266
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 103/232 (44%), Gaps = 24/232 (10%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQR 75
+ F E +MK I+H NL++++ C+ E ++ E+M +G+L YL N ++
Sbjct: 56 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 115
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
L + ++SA+EYL IH DL N L+ +N + ++DFG+++L+ G D
Sbjct: 116 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAH 171
Query: 136 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDW 195
I + APE + S DV++FG++L E T
Sbjct: 172 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS------------------ 213
Query: 196 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEI 247
P +++ L ++D E C V+ L AC +P R + EI
Sbjct: 214 -PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 119/255 (46%), Gaps = 24/255 (9%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
+VA+K+ + + F E ++M ++ H L+++ C+ + ++ EYM +G L
Sbjct: 50 DVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 108
Query: 62 YLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFG 121
YL Q L + DV A+EYL S +H DL N L++D V +SDFG
Sbjct: 109 YLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFG 165
Query: 122 IAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEF 181
+++ ++ +D+ + + + + PE + S+ D+++FG+++ E ++ K YE
Sbjct: 166 LSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 224
Query: 182 FNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQR 241
F T +H + + +L S++ V+ + +C E ++R
Sbjct: 225 FTNSETAEHIAQG------LRLYRPHLASEK-------------VYTIMYSCWHEKADER 265
Query: 242 INAKEIVTKLLKIRD 256
K +++ +L + D
Sbjct: 266 PTFKILLSNILDVMD 280
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 103/232 (44%), Gaps = 24/232 (10%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQR 75
+ F E +MK I+H NL++++ C+ E ++ E+M +G+L YL N ++
Sbjct: 56 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 115
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
L + ++SA+EYL IH DL N L+ +N + ++DFG+++L+ G D
Sbjct: 116 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAH 171
Query: 136 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDW 195
I + APE + S DV++FG++L E T
Sbjct: 172 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS------------------ 213
Query: 196 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEI 247
P +++ L ++D E C V+ L AC +P R + EI
Sbjct: 214 -PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 103/232 (44%), Gaps = 24/232 (10%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQR 75
+ F E +MK I+H NL++++ C+ E ++ E+M +G+L YL N ++
Sbjct: 67 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 126
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
L + ++SA+EYL IH DL N L+ +N + ++DFG+++L+ G D
Sbjct: 127 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAH 182
Query: 136 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDW 195
I + APE + S DV++FG++L E T
Sbjct: 183 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS------------------ 224
Query: 196 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEI 247
P +++ L ++D E C V+ L AC +P R + EI
Sbjct: 225 -PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 275
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 119/255 (46%), Gaps = 24/255 (9%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
+VA+K+ + + F E ++M ++ H L+++ C+ + ++ EYM +G L
Sbjct: 41 DVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 99
Query: 62 YLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFG 121
YL Q L + DV A+EYL S +H DL N L++D V +SDFG
Sbjct: 100 YLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFG 156
Query: 122 IAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEF 181
+++ ++ +D+ + + + + PE + S+ D+++FG+++ E ++ K YE
Sbjct: 157 LSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 215
Query: 182 FNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQR 241
F T +H + + +L S++ V+ + +C E ++R
Sbjct: 216 FTNSETAEHIAQG------LRLYRPHLASEK-------------VYTIMYSCWHEKADER 256
Query: 242 INAKEIVTKLLKIRD 256
K +++ +L + D
Sbjct: 257 PTFKILLSNILDVMD 271
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 100/200 (50%), Gaps = 19/200 (9%)
Query: 3 VAVKVFNLQCGRAFKS-FDVECEMMKSIRHRNLIKVISSCSNEEFKAL--VLEYMPHGSL 59
VAVK CG +S + E ++++++ H ++IK C ++ K+L V+EY+P GSL
Sbjct: 46 VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL 105
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
YL + + + Q L + + YLH + IH +L NVLLD++ + + D
Sbjct: 106 RDYLPRHS--IGLAQLLLFAQQICEGMAYLH---AQHYIHRNLAARNVLLDNDRLVKIGD 160
Query: 120 FGIAKLLI-GEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT----G 174
FG+AK + G + + + + + APE +E + DV+SFG+ L E T
Sbjct: 161 FGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSS 220
Query: 175 KKPTYEFF------NGEMTL 188
+ P +F G+MT+
Sbjct: 221 QSPPTKFLELIGIAQGQMTV 240
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 111/242 (45%), Gaps = 28/242 (11%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
+VAVK Q + +F E +MK ++H+ L+++ + + E ++ EYM +GSL
Sbjct: 35 KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVD 92
Query: 62 YLYSSNCI-LDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
+L + + I L I + L++ +A + ++ IH +L+ N+L+ D L ++DF
Sbjct: 93 FLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRNLRAANILVSDTLSCKIADF 149
Query: 121 GIAKLLIGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
G+A+L+ ED T + I + APE G + DV+SFGI+L E T + Y
Sbjct: 150 GLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 207
Query: 180 EFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPE 239
P T V NL + V + C ++ L C E PE
Sbjct: 208 -----------------PGMTNPEVIQNL--ERGYRMVRPDNCPEELYQLMRLCWKERPE 248
Query: 240 QR 241
R
Sbjct: 249 DR 250
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 103/232 (44%), Gaps = 24/232 (10%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQR 75
+ F E +MK I+H NL++++ C+ E ++ E+M +G+L YL N ++
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
L + ++SA+EYL IH DL N L+ +N + ++DFG+++L+ G D
Sbjct: 119 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAH 174
Query: 136 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDW 195
I + APE + S DV++FG++L E T
Sbjct: 175 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS------------------ 216
Query: 196 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEI 247
P +++ L ++D E C V+ L AC +P R + EI
Sbjct: 217 -PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 103/232 (44%), Gaps = 24/232 (10%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQR 75
+ F E +MK I+H NL++++ C+ E ++ E+M +G+L YL N ++
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
L + ++SA+EYL IH DL N L+ +N + ++DFG+++L+ G D
Sbjct: 119 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAH 174
Query: 136 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDW 195
I + APE + S DV++FG++L E T
Sbjct: 175 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS------------------ 216
Query: 196 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEI 247
P +++ L ++D E C V+ L AC +P R + EI
Sbjct: 217 -PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 128/265 (48%), Gaps = 32/265 (12%)
Query: 2 EVAVKVFNLQCG---RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
+VAV + L+ G + + F E +M H N++ + + + +V+E+M +G+
Sbjct: 71 DVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGA 130
Query: 59 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
L+ +L + + Q + ++ +A+ + YL +H DL N+L++ NLV +S
Sbjct: 131 LDAFLRKHDGQFTVIQLVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVS 187
Query: 119 DFGIAKLLIGEDQSM-TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKK 176
DFG+++++ + +++ T T + + APE + + ++ DV+S+GI++ E + G++
Sbjct: 188 DFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGER 247
Query: 177 PTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVE 236
P ++ +S +V+ A +E A C + + L + C +
Sbjct: 248 PYWD-----------------MSNQDVIKA---IEEGYRLPAPMDCPAGLHQLMLDCWQK 287
Query: 237 SPEQRINAKEIVTKLLKIRDSLLRN 261
+R ++IV I D ++RN
Sbjct: 288 ERAERPKFEQIVG----ILDKMIRN 308
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 103/232 (44%), Gaps = 24/232 (10%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQR 75
+ F E +MK I+H NL++++ C+ E ++ E+M +G+L YL N ++
Sbjct: 55 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 114
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
L + ++SA+EYL IH DL N L+ +N + ++DFG+++L+ G D
Sbjct: 115 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAP 170
Query: 136 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDW 195
I + APE + S DV++FG++L E T
Sbjct: 171 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS------------------ 212
Query: 196 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEI 247
P +++ L ++D E C V+ L AC +P R + EI
Sbjct: 213 -PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 102/232 (43%), Gaps = 24/232 (10%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQR 75
+ F E +MK I+H NL++++ C+ E ++ E+M +G+L YL N +
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
L + ++SA+EYL IH DL N L+ +N + ++DFG+++L+ G D
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAH 169
Query: 136 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDW 195
I + APE + S DV++FG++L E T
Sbjct: 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS------------------ 211
Query: 196 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEI 247
P +++ L ++D E C V+ L AC +P R + EI
Sbjct: 212 -PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 103/232 (44%), Gaps = 24/232 (10%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQR 75
+ F E +MK I+H NL++++ C+ E ++ E+M +G+L YL N ++
Sbjct: 56 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 115
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
L + ++SA+EYL IH DL N L+ +N + ++DFG+++L+ G D
Sbjct: 116 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAP 171
Query: 136 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDW 195
I + APE + S DV++FG++L E T
Sbjct: 172 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS------------------ 213
Query: 196 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEI 247
P +++ L ++D E C V+ L AC +P R + EI
Sbjct: 214 -PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 103/232 (44%), Gaps = 24/232 (10%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQR 75
+ F E +MK I+H NL++++ C+ E ++ E+M +G+L YL N +
Sbjct: 52 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 111
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
L + ++SA+EYL IH DL N L+ +N + ++DFG+++L+ G D
Sbjct: 112 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTFTAH 167
Query: 136 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDW 195
I + APE + S DV++FG++L E T Y +
Sbjct: 168 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID------------ 215
Query: 196 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEI 247
P E++ ++D E C V+ L AC +P R + EI
Sbjct: 216 -PSQVYELL------EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 102/232 (43%), Gaps = 24/232 (10%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQR 75
+ F E +MK I+H NL++++ C+ E ++ E+M +G+L YL N +
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
L + ++SA+EYL IH DL N L+ +N + ++DFG+++L+ G D
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAH 169
Query: 136 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDW 195
I + APE + S DV++FG++L E T
Sbjct: 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS------------------ 211
Query: 196 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEI 247
P +++ L ++D E C V+ L AC +P R + EI
Sbjct: 212 -PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 102/232 (43%), Gaps = 24/232 (10%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQR 75
+ F E +MK I+H NL++++ C+ E ++ E+M +G+L YL N +
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 118
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
L + ++SA+EYL IH DL N L+ +N + ++DFG+++L+ G D
Sbjct: 119 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAH 174
Query: 136 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDW 195
I + APE + S DV++FG++L E T
Sbjct: 175 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS------------------ 216
Query: 196 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEI 247
P +++ L ++D E C V+ L AC +P R + EI
Sbjct: 217 -PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 121/267 (45%), Gaps = 34/267 (12%)
Query: 2 EVAVKVFNLQCG---RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
E+ V + L+ G + + F E +M H N+I + + ++ E+M +GS
Sbjct: 35 EIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGS 94
Query: 59 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
L+ +L ++ + Q + ++ +A+ ++YL +H L N+L++ NLV +S
Sbjct: 95 LDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL---ADMNYVHRALAARNILVNSNLVCKVS 151
Query: 119 DFGIAKLLIGEDQSMTQTQTLA---TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-G 174
DFG+++ L + T T L I + APE + + ++ DV+S+GI++ E + G
Sbjct: 152 DFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYG 211
Query: 175 KKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACT 234
++P ++ N +V++A ++D C S + L + C
Sbjct: 212 ERPYWDMTN-----------------QDVINA---IEQDYRLPPPMDCPSALHQLMLDCW 251
Query: 235 VESPEQRINAKEIVTKLLKIRDSLLRN 261
+ R +IV L D ++RN
Sbjct: 252 QKDRNHRPKFGQIVNTL----DKMIRN 274
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 93/181 (51%), Gaps = 9/181 (4%)
Query: 2 EVAVKVFNLQCG--RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
+VAVK+ N+ + ++F E +++ RH N++ + + + A+V ++ SL
Sbjct: 32 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSL 90
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
+L+ ++ + ++I A ++YLH + +IH DLK +N+ L ++L + D
Sbjct: 91 YHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGD 147
Query: 120 FGIAKLLIGEDQSMTQTQTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLMETFTGKK 176
FG+A + S Q +I +MAPE R + S DVY+FGI+L E TG+
Sbjct: 148 FGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 207
Query: 177 P 177
P
Sbjct: 208 P 208
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 93/181 (51%), Gaps = 9/181 (4%)
Query: 2 EVAVKVFNLQCG--RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
+VAVK+ N+ + ++F E +++ RH N++ + + + A+V ++ SL
Sbjct: 34 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSL 92
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
+L+ ++ + ++I A ++YLH + +IH DLK +N+ L ++L + D
Sbjct: 93 YHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGD 149
Query: 120 FGIAKLLIGEDQSMTQTQTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLMETFTGKK 176
FG+A + S Q +I +MAPE R + S DVY+FGI+L E TG+
Sbjct: 150 FGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 209
Query: 177 P 177
P
Sbjct: 210 P 210
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 93/181 (51%), Gaps = 9/181 (4%)
Query: 2 EVAVKVFNLQCG--RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
+VAVK+ N+ + ++F E +++ RH N++ + + + A+V ++ SL
Sbjct: 37 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSL 95
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
+L+ ++ + ++I A ++YLH + +IH DLK +N+ L ++L + D
Sbjct: 96 YHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGD 152
Query: 120 FGIAKLLIGEDQSMTQTQTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLMETFTGKK 176
FG+A + S Q +I +MAPE R + S DVY+FGI+L E TG+
Sbjct: 153 FGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 212
Query: 177 P 177
P
Sbjct: 213 P 213
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 93/181 (51%), Gaps = 9/181 (4%)
Query: 2 EVAVKVFNLQCG--RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
+VAVK+ N+ + ++F E +++ RH N++ + + + A+V ++ SL
Sbjct: 37 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSL 95
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
+L+ ++ + ++I A ++YLH + +IH DLK +N+ L ++L + D
Sbjct: 96 YHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGD 152
Query: 120 FGIAKLLIGEDQSMTQTQTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLMETFTGKK 176
FG+A + S Q +I +MAPE R + S DVY+FGI+L E TG+
Sbjct: 153 FGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 212
Query: 177 P 177
P
Sbjct: 213 P 213
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 93/181 (51%), Gaps = 9/181 (4%)
Query: 2 EVAVKVFNLQCG--RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
+VAVK+ N+ + ++F E +++ RH N++ + + + A+V ++ SL
Sbjct: 59 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSL 117
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
+L+ ++ + ++I A ++YLH + +IH DLK +N+ L ++L + D
Sbjct: 118 YHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGD 174
Query: 120 FGIAKLLIGEDQSMTQTQTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLMETFTGKK 176
FG+A + S Q +I +MAPE R + S DVY+FGI+L E TG+
Sbjct: 175 FGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 234
Query: 177 P 177
P
Sbjct: 235 P 235
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 93/181 (51%), Gaps = 9/181 (4%)
Query: 2 EVAVKVFNLQCG--RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
+VAVK+ N+ + ++F E +++ RH N++ + + + A+V ++ SL
Sbjct: 60 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSL 118
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
+L+ ++ + ++I A ++YLH + +IH DLK +N+ L ++L + D
Sbjct: 119 YHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGD 175
Query: 120 FGIAKLLIGEDQSMTQTQTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLMETFTGKK 176
FG+A + S Q +I +MAPE R + S DVY+FGI+L E TG+
Sbjct: 176 FGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 235
Query: 177 P 177
P
Sbjct: 236 P 236
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 93/181 (51%), Gaps = 9/181 (4%)
Query: 2 EVAVKVFNLQCG--RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
+VAVK+ N+ + ++F E +++ RH N++ + + + A+V ++ SL
Sbjct: 32 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQL-AIVTQWCEGSSL 90
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
+L+ ++ + ++I A ++YLH + +IH DLK +N+ L ++L + D
Sbjct: 91 YHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGD 147
Query: 120 FGIAKLLIGEDQSMTQTQTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLMETFTGKK 176
FG+A + S Q +I +MAPE R + S DVY+FGI+L E TG+
Sbjct: 148 FGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 207
Query: 177 P 177
P
Sbjct: 208 P 208
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 115/243 (47%), Gaps = 30/243 (12%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
+VAVK + ++F E +MK+++H L+K+ + + E ++ E+M GSL
Sbjct: 41 KVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPI-YIITEFMAKGSLLD 98
Query: 62 YLYSSNCILDIFQRLNIMIDVASAL-EYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
+L S Q L +ID ++ + E + F IH DL+ N+L+ +LV ++DF
Sbjct: 99 FLKSDEGSK---QPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADF 155
Query: 121 GIAKLLIGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPT 178
G+A+++ ED T + I + APE G + DV+SFGI+LME T G+ P
Sbjct: 156 GLARVI--EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP- 212
Query: 179 YEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESP 238
+ G +S EV+ A + E C ++N+ M C P
Sbjct: 213 ---YPG-------------MSNPEVIRA---LERGYRMPRPENCPEELYNIMMRCWKNRP 253
Query: 239 EQR 241
E+R
Sbjct: 254 EER 256
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 93/181 (51%), Gaps = 9/181 (4%)
Query: 2 EVAVKVFNLQCG--RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
+VAVK+ N+ + ++F E +++ RH N++ + + + A+V ++ SL
Sbjct: 36 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSL 94
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
+L++S ++ + ++I A ++YLH + +IH DLK +N+ L ++ + D
Sbjct: 95 YHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGD 151
Query: 120 FGIAKLLIGEDQSMTQTQTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLMETFTGKK 176
FG+A + S Q +I +MAPE R S DVY+FGI+L E TG+
Sbjct: 152 FGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQL 211
Query: 177 P 177
P
Sbjct: 212 P 212
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 21 VECEMMKSIRHRNLIKV------ISSCSNEEFKALVLEYMPHGSLEKYL--YSSNCILDI 72
+E ++MK + H N++ + + + L +EY G L KYL + + C L
Sbjct: 61 LEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKE 120
Query: 73 FQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLD---DNLVAYLSDFGIAKLLIGE 129
++ D++SAL YLH +IH DLKP+N++L L+ + D G AK L
Sbjct: 121 GPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--- 174
Query: 130 DQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
DQ T+ + T+ Y+APE + + + D +SFG + E TG +P
Sbjct: 175 DQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 21 VECEMMKSIRHRNLIKV------ISSCSNEEFKALVLEYMPHGSLEKYL--YSSNCILDI 72
+E ++MK + H N++ + + + L +EY G L KYL + + C L
Sbjct: 62 LEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKE 121
Query: 73 FQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLD---DNLVAYLSDFGIAKLLIGE 129
++ D++SAL YLH +IH DLKP+N++L L+ + D G AK L
Sbjct: 122 GPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--- 175
Query: 130 DQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
DQ T+ + T+ Y+APE + + + D +SFG + E TG +P
Sbjct: 176 DQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 115/243 (47%), Gaps = 30/243 (12%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
+VAVK + ++F E +MK+++H L+K+ + + E ++ E+M GSL
Sbjct: 214 KVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPI-YIITEFMAKGSLLD 271
Query: 62 YLYSSNCILDIFQRLNIMIDVASAL-EYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
+L S Q L +ID ++ + E + F IH DL+ N+L+ +LV ++DF
Sbjct: 272 FLKSDEGSK---QPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADF 328
Query: 121 GIAKLLIGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPT 178
G+A+++ ED T + I + APE G + DV+SFGI+LME T G+ P
Sbjct: 329 GLARVI--EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP- 385
Query: 179 YEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESP 238
+ G +S EV+ A + E C ++N+ M C P
Sbjct: 386 ---YPG-------------MSNPEVIRA---LERGYRMPRPENCPEELYNIMMRCWKNRP 426
Query: 239 EQR 241
E+R
Sbjct: 427 EER 429
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 104/232 (44%), Gaps = 24/232 (10%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQR 75
+ F E +MK I+H NL++++ C+ E ++ E+M +G+L YL N ++
Sbjct: 258 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 317
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
L + ++SA+EYL IH +L N L+ +N + ++DFG+++L+ G D
Sbjct: 318 LYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAH 373
Query: 136 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDW 195
I + APE + S DV++FG++L E TY
Sbjct: 374 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI-----ATYGMS------------- 415
Query: 196 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEI 247
P +++ L ++D E C V+ L AC +P R + EI
Sbjct: 416 -PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 466
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 92/181 (50%), Gaps = 9/181 (4%)
Query: 2 EVAVKVFNLQCG--RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
+VAVK+ N+ + ++F E +++ RH N++ + + + A+V ++ SL
Sbjct: 32 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSL 90
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
+L+ ++ + ++I A ++YLH + +IH DLK +N+ L ++L + D
Sbjct: 91 YHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGD 147
Query: 120 FGIAKLLIGEDQSMTQTQTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLMETFTGKK 176
FG+A S Q +I +MAPE R + S DVY+FGI+L E TG+
Sbjct: 148 FGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 207
Query: 177 P 177
P
Sbjct: 208 P 208
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 104/232 (44%), Gaps = 24/232 (10%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQR 75
+ F E +MK I+H NL++++ C+ E ++ E+M +G+L YL N ++
Sbjct: 300 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 359
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
L + ++SA+EYL IH +L N L+ +N + ++DFG+++L+ G D
Sbjct: 360 LYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAH 415
Query: 136 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDW 195
I + APE + S DV++FG++L E TY
Sbjct: 416 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI-----ATYGM-------------- 456
Query: 196 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEI 247
P +++ L ++D E C V+ L AC +P R + EI
Sbjct: 457 SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 508
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 92/181 (50%), Gaps = 9/181 (4%)
Query: 2 EVAVKVFNLQCG--RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
+VAVK+ N+ + ++F E +++ RH N++ + + + A+V ++ SL
Sbjct: 52 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSL 110
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
+L+ ++ + ++I A ++YLH + +IH DLK +N+ L ++L + D
Sbjct: 111 YHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGD 167
Query: 120 FGIAKLLIGEDQSMTQTQTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLMETFTGKK 176
FG+A S Q +I +MAPE R + S DVY+FGI+L E TG+
Sbjct: 168 FGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 227
Query: 177 P 177
P
Sbjct: 228 P 228
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 98/187 (52%), Gaps = 8/187 (4%)
Query: 2 EVAVKVFNLQCG---RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
E+ V + L+ G + + F E +M H N+I + + + ++ EYM +GS
Sbjct: 57 EICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGS 116
Query: 59 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
L+ +L ++ + Q + ++ + S ++YL +H DL N+L++ NLV +S
Sbjct: 117 LDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKVS 173
Query: 119 DFGIAKLLIGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKK 176
DFG++++L + ++ T+ I + APE + ++ DV+S+GI++ E + G++
Sbjct: 174 DFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER 233
Query: 177 PTYEFFN 183
P ++ N
Sbjct: 234 PYWDMSN 240
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 92/181 (50%), Gaps = 9/181 (4%)
Query: 2 EVAVKVFNLQCG--RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
+VAVK+ N+ + ++F E +++ RH N++ + + + A+V ++ SL
Sbjct: 60 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSL 118
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
+L+ ++ + ++I A ++YLH + +IH DLK +N+ L ++L + D
Sbjct: 119 YHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGD 175
Query: 120 FGIAKLLIGEDQSMTQTQTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLMETFTGKK 176
FG+A S Q +I +MAPE R + S DVY+FGI+L E TG+
Sbjct: 176 FGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 235
Query: 177 P 177
P
Sbjct: 236 P 236
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 20/211 (9%)
Query: 2 EVAVKVFNLQCGRA---FKSFDVECEMMKSIRHRNLIKVISSCSNE----EFKALVLEYM 54
+VAVKV R + F E + ++ H ++ V ++ E +V+EY+
Sbjct: 39 DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYV 98
Query: 55 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLV 114
+L +++ + + + ++ D AL + H +IH D+KP N+++
Sbjct: 99 DGVTLRDIVHTEGPMTP-KRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNA 154
Query: 115 AYLSDFGIAKLLIGEDQSMTQTQT-LATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 173
+ DFGIA+ + S+TQT + T Y++PE R V DVYS G +L E T
Sbjct: 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 174 GKKPTYEFFNGE----MTLKHWVNDWLPIST 200
G+ P F G+ + +H D +P S
Sbjct: 215 GEPP----FTGDSPVSVAYQHVREDPIPPSA 241
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 103/244 (42%), Gaps = 25/244 (10%)
Query: 19 FDVECEMMKSIRHRNLIKVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLN 77
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 77 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 136
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQ 137
+ VA ++YL S +H DL N +LD+ ++DFG+A+ + ++ +
Sbjct: 137 FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNK 193
Query: 138 TLA--TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDW 195
T A + +MA E + + +T DV+SFG++L E T P Y N
Sbjct: 194 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN------------ 241
Query: 196 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIR 255
D + + + E C ++ + + C E R + E+V+++ I
Sbjct: 242 -------TFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 294
Query: 256 DSLL 259
+ +
Sbjct: 295 STFI 298
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 98/187 (52%), Gaps = 8/187 (4%)
Query: 2 EVAVKVFNLQCG---RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
E+ V + L+ G + + F E +M H N+I + + + ++ EYM +GS
Sbjct: 42 EICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGS 101
Query: 59 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
L+ +L ++ + Q + ++ + S ++YL +H DL N+L++ NLV +S
Sbjct: 102 LDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVS 158
Query: 119 DFGIAKLLIGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKK 176
DFG++++L + ++ T+ I + APE + ++ DV+S+GI++ E + G++
Sbjct: 159 DFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER 218
Query: 177 PTYEFFN 183
P ++ N
Sbjct: 219 PYWDMSN 225
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 98/187 (52%), Gaps = 8/187 (4%)
Query: 2 EVAVKVFNLQCG---RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
E+ V + L+ G + + F E +M H N+I + + + ++ EYM +GS
Sbjct: 36 EICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGS 95
Query: 59 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
L+ +L ++ + Q + ++ + S ++YL +H DL N+L++ NLV +S
Sbjct: 96 LDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVS 152
Query: 119 DFGIAKLLIGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKK 176
DFG++++L + ++ T+ I + APE + ++ DV+S+GI++ E + G++
Sbjct: 153 DFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER 212
Query: 177 PTYEFFN 183
P ++ N
Sbjct: 213 PYWDMSN 219
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 16 FKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQR 75
F+ F E +M ++ H N++K+ N +V+E++P G L L + +
Sbjct: 67 FQEFQREVFIMSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVK 124
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL---DDN--LVAYLSDFGIAKLLIGED 130
L +M+D+A +EY+ + P++H DL+ N+ L D+N + A ++DFG+++
Sbjct: 125 LRLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ------ 177
Query: 131 QSM-TQTQTLATIGYMAPEY--GREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMT 187
QS+ + + L +MAPE E + D YSF ++L TG+ P E+ G++
Sbjct: 178 QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK 237
Query: 188 LKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEI 247
N++ +E + E C + N+ C P++R + I
Sbjct: 238 F-----------------INMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYI 280
Query: 248 VTKL 251
V +L
Sbjct: 281 VKEL 284
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 92/181 (50%), Gaps = 9/181 (4%)
Query: 2 EVAVKVFNLQCG--RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
+VAVK+ N+ + ++F E +++ RH N++ + + + A+V ++ SL
Sbjct: 48 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSL 106
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
+L++S ++ + ++I A ++YLH + +IH DLK +N+ L ++ + D
Sbjct: 107 YHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGD 163
Query: 120 FGIAKLLIGEDQSMTQTQTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLMETFTGKK 176
FG+A S Q +I +MAPE R S DVY+FGI+L E TG+
Sbjct: 164 FGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQL 223
Query: 177 P 177
P
Sbjct: 224 P 224
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 12/207 (5%)
Query: 2 EVAVKVFNLQCGRA---FKSFDVECEMMKSIRHRNLIKVISSCSNE----EFKALVLEYM 54
+VAVKV R + F E + ++ H ++ V + E +V+EY+
Sbjct: 39 DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYV 98
Query: 55 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLV 114
+L +++ + + + ++ D AL + H +IH D+KP N+++
Sbjct: 99 DGVTLRDIVHTEGPMTP-KRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNA 154
Query: 115 AYLSDFGIAKLLIGEDQSMTQTQT-LATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 173
+ DFGIA+ + S+TQT + T Y++PE R V DVYS G +L E T
Sbjct: 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 174 GKKPTYEFFNGEMTLKHWVNDWLPIST 200
G+ P + +H D +P S
Sbjct: 215 GEPPFTGDSPDSVAYQHVREDPIPPSA 241
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 103/232 (44%), Gaps = 24/232 (10%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI-LDIFQR 75
+ F E +MK I+H NL++++ C+ E ++ E+M +G+L YL N +
Sbjct: 261 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 320
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
L + ++SA+EYL IH +L N L+ +N + ++DFG+++L+ G D
Sbjct: 321 LYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAH 376
Query: 136 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDW 195
I + APE + S DV++FG++L E TY
Sbjct: 377 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI-----ATYGM-------------- 417
Query: 196 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEI 247
P +++ L ++D E C V+ L AC +P R + EI
Sbjct: 418 SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 469
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 2 EVAVKVFNLQCGRA---FKSFDVECEMMKSIRHRNLIKVISSCSNE----EFKALVLEYM 54
+VAVKV R + F E + ++ H ++ V + E +V+EY+
Sbjct: 39 DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYV 98
Query: 55 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLV 114
+L +++ + + + ++ D AL + H +IH D+KP N+++
Sbjct: 99 DGVTLRDIVHTEGPMTP-KRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNA 154
Query: 115 AYLSDFGIAKLLIGEDQSMTQTQT-LATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 173
+ DFGIA+ + S+TQT + T Y++PE R V DVYS G +L E T
Sbjct: 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 174 GKKPTYEFFNGE----MTLKHWVNDWLPIST 200
G+ P F G+ + +H D +P S
Sbjct: 215 GEPP----FTGDSPVSVAYQHVREDPIPPSA 241
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 2 EVAVKVFNLQCGRA---FKSFDVECEMMKSIRHRNLIKVISSCSNE----EFKALVLEYM 54
+VAVKV R + F E + ++ H ++ V + E +V+EY+
Sbjct: 39 DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYV 98
Query: 55 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLV 114
+L +++ + + + ++ D AL + H +IH D+KP N+++
Sbjct: 99 DGVTLRDIVHTEGPMTP-KRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNA 154
Query: 115 AYLSDFGIAKLLIGEDQSMTQTQT-LATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 173
+ DFGIA+ + S+TQT + T Y++PE R V DVYS G +L E T
Sbjct: 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 174 GKKPTYEFFNGE----MTLKHWVNDWLPIST 200
G+ P F G+ + +H D +P S
Sbjct: 215 GEPP----FTGDSPVSVAYQHVREDPIPPSA 241
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 103/244 (42%), Gaps = 25/244 (10%)
Query: 19 FDVECEMMKSIRHRNLIKVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLN 77
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 76 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 135
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQ 137
+ VA ++YL S +H DL N +LD+ ++DFG+A+ + ++ +
Sbjct: 136 FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 192
Query: 138 TLA--TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDW 195
T A + +MA E + + +T DV+SFG++L E T P Y N
Sbjct: 193 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN------------ 240
Query: 196 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIR 255
D + + + E C ++ + + C E R + E+V+++ I
Sbjct: 241 -------TFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 293
Query: 256 DSLL 259
+ +
Sbjct: 294 STFI 297
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 103/244 (42%), Gaps = 25/244 (10%)
Query: 19 FDVECEMMKSIRHRNLIKVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLN 77
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 70 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 129
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQ 137
+ VA ++YL S +H DL N +LD+ ++DFG+A+ + ++ +
Sbjct: 130 FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 186
Query: 138 TLA--TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDW 195
T A + +MA E + + +T DV+SFG++L E T P Y N
Sbjct: 187 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN------------ 234
Query: 196 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIR 255
D + + + E C ++ + + C E R + E+V+++ I
Sbjct: 235 -------TFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 287
Query: 256 DSLL 259
+ +
Sbjct: 288 STFI 291
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 2 EVAVKVFNLQCGRA---FKSFDVECEMMKSIRHRNLIKVISSCSNE----EFKALVLEYM 54
+VAVKV R + F E + ++ H ++ V + E +V+EY+
Sbjct: 56 DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYV 115
Query: 55 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLV 114
+L +++ + + + ++ D AL + H +IH D+KP N+++
Sbjct: 116 DGVTLRDIVHTEGPMTP-KRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNA 171
Query: 115 AYLSDFGIAKLLIGEDQSMTQTQT-LATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 173
+ DFGIA+ + S+TQT + T Y++PE R V DVYS G +L E T
Sbjct: 172 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 231
Query: 174 GKKPTYEFFNGE----MTLKHWVNDWLPIST 200
G+ P F G+ + +H D +P S
Sbjct: 232 GEPP----FTGDSPVSVAYQHVREDPIPPSA 258
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 103/244 (42%), Gaps = 25/244 (10%)
Query: 19 FDVECEMMKSIRHRNLIKVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLN 77
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 78 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 137
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQ 137
+ VA ++YL S +H DL N +LD+ ++DFG+A+ + ++ +
Sbjct: 138 FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 194
Query: 138 TLA--TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDW 195
T A + +MA E + + +T DV+SFG++L E T P Y N
Sbjct: 195 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN------------ 242
Query: 196 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIR 255
D + + + E C ++ + + C E R + E+V+++ I
Sbjct: 243 -------TFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 295
Query: 256 DSLL 259
+ +
Sbjct: 296 STFI 299
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 103/244 (42%), Gaps = 25/244 (10%)
Query: 19 FDVECEMMKSIRHRNLIKVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLN 77
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 77 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 136
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQ 137
+ VA ++YL S +H DL N +LD+ ++DFG+A+ + ++ +
Sbjct: 137 FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 193
Query: 138 TLA--TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDW 195
T A + +MA E + + +T DV+SFG++L E T P Y N
Sbjct: 194 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN------------ 241
Query: 196 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIR 255
D + + + E C ++ + + C E R + E+V+++ I
Sbjct: 242 -------TFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 294
Query: 256 DSLL 259
+ +
Sbjct: 295 STFI 298
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 103/244 (42%), Gaps = 25/244 (10%)
Query: 19 FDVECEMMKSIRHRNLIKVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLN 77
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 73 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 132
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQ 137
+ VA ++YL S +H DL N +LD+ ++DFG+A+ + ++ +
Sbjct: 133 FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 189
Query: 138 TLA--TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDW 195
T A + +MA E + + +T DV+SFG++L E T P Y N
Sbjct: 190 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN------------ 237
Query: 196 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIR 255
D + + + E C ++ + + C E R + E+V+++ I
Sbjct: 238 -------TFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 290
Query: 256 DSLL 259
+ +
Sbjct: 291 STFI 294
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 103/244 (42%), Gaps = 25/244 (10%)
Query: 19 FDVECEMMKSIRHRNLIKVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLN 77
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 97 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 156
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQ 137
+ VA ++YL S +H DL N +LD+ ++DFG+A+ + ++ +
Sbjct: 157 FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 213
Query: 138 TLA--TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDW 195
T A + +MA E + + +T DV+SFG++L E T P Y N
Sbjct: 214 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN------------ 261
Query: 196 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIR 255
D + + + E C ++ + + C E R + E+V+++ I
Sbjct: 262 -------TFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 314
Query: 256 DSLL 259
+ +
Sbjct: 315 STFI 318
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 103/244 (42%), Gaps = 25/244 (10%)
Query: 19 FDVECEMMKSIRHRNLIKVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLN 77
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 78 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 137
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQ 137
+ VA ++YL S +H DL N +LD+ ++DFG+A+ + ++ +
Sbjct: 138 FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 194
Query: 138 TLA--TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDW 195
T A + +MA E + + +T DV+SFG++L E T P Y N
Sbjct: 195 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN------------ 242
Query: 196 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIR 255
D + + + E C ++ + + C E R + E+V+++ I
Sbjct: 243 -------TFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 295
Query: 256 DSLL 259
+ +
Sbjct: 296 STFI 299
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 101/239 (42%), Gaps = 25/239 (10%)
Query: 19 FDVECEMMKSIRHRNLIKVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLN 77
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 96 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 155
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQ 137
+ VA ++YL S +H DL N +LD+ ++DFG+A+ + ++ +
Sbjct: 156 FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 212
Query: 138 TLA--TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDW 195
T A + +MA E + + +T DV+SFG++L E T P Y N
Sbjct: 213 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN------------ 260
Query: 196 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI 254
D + + + E C ++ + + C E R + E+V+++ I
Sbjct: 261 -------TFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 312
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 92/181 (50%), Gaps = 9/181 (4%)
Query: 2 EVAVKVFNLQCG--RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
+VAVK+ N+ + ++F E +++ RH N++ + + + A+V ++ SL
Sbjct: 48 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQL-AIVTQWCEGSSL 106
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
+L++S ++ + ++I A ++YLH + +IH DLK +N+ L ++ + D
Sbjct: 107 YHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGD 163
Query: 120 FGIAKLLIGEDQSMTQTQTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLMETFTGKK 176
FG+A S Q +I +MAPE R S DVY+FGI+L E TG+
Sbjct: 164 FGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQL 223
Query: 177 P 177
P
Sbjct: 224 P 224
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 103/244 (42%), Gaps = 25/244 (10%)
Query: 19 FDVECEMMKSIRHRNLIKVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLN 77
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 75 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 134
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQ 137
+ VA ++YL S +H DL N +LD+ ++DFG+A+ + ++ +
Sbjct: 135 FGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 191
Query: 138 TLA--TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDW 195
T A + +MA E + + +T DV+SFG++L E T P Y N
Sbjct: 192 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN------------ 239
Query: 196 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIR 255
D + + + E C ++ + + C E R + E+V+++ I
Sbjct: 240 -------TFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 292
Query: 256 DSLL 259
+ +
Sbjct: 293 STFI 296
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 111/244 (45%), Gaps = 34/244 (13%)
Query: 16 FKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQR 75
F+ F E +M ++ H N++K+ N +V+E++P G L L + +
Sbjct: 67 FQEFQREVFIMSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVK 124
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL---DDN--LVAYLSDFGIAKLLIGED 130
L +M+D+A +EY+ + P++H DL+ N+ L D+N + A ++DFG ++
Sbjct: 125 LRLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ------ 177
Query: 131 QSM-TQTQTLATIGYMAPEY--GREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMT 187
QS+ + + L +MAPE E + D YSF ++L TG+ P E+ G++
Sbjct: 178 QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK 237
Query: 188 LKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEI 247
N++ +E + E C + N+ C P++R + I
Sbjct: 238 F-----------------INMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYI 280
Query: 248 VTKL 251
V +L
Sbjct: 281 VKEL 284
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 19/200 (9%)
Query: 3 VAVKVFNLQCGRAFKS-FDVECEMMKSIRHRNLIKVISSCSNEEFKAL--VLEYMPHGSL 59
VAVK G +S + E ++++++ H ++IK C + +L V+EY+P GSL
Sbjct: 63 VAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSL 122
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
YL + + + Q L + + YLH + IH DL NVLLD++ + + D
Sbjct: 123 RDYLPRHS--IGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGD 177
Query: 120 FGIAKLLI-GEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT----G 174
FG+AK + G + + + + + APE +E + DV+SFG+ L E T
Sbjct: 178 FGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSS 237
Query: 175 KKPTYEFF------NGEMTL 188
+ P +F G+MT+
Sbjct: 238 QSPPTKFLELIGIAQGQMTV 257
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 94/186 (50%), Gaps = 10/186 (5%)
Query: 1 MEVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLE 60
+ +A+K + R + E + K ++H+N+++ + S S F + +E +P GSL
Sbjct: 48 VRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS 107
Query: 61 KYLYSS-NCILDIFQRLNIMI-DVASALEYLHFGCSAPVIHCDLKPDNVLLDD-NLVAYL 117
L S + D Q + + L+YLH ++H D+K DNVL++ + V +
Sbjct: 108 ALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKI 164
Query: 118 SDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGR--VSTNGDVYSFGIMLMETFTGK 175
SDFG +K L G + T+T T T+ YMAPE +G D++S G ++E TGK
Sbjct: 165 SDFGTSKRLAGIN-PCTETFT-GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
Query: 176 KPTYEF 181
P YE
Sbjct: 223 PPFYEL 228
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 94/186 (50%), Gaps = 10/186 (5%)
Query: 1 MEVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLE 60
+ +A+K + R + E + K ++H+N+++ + S S F + +E +P GSL
Sbjct: 34 VRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS 93
Query: 61 KYLYSS-NCILDIFQRLNIMI-DVASALEYLHFGCSAPVIHCDLKPDNVLLDD-NLVAYL 117
L S + D Q + + L+YLH ++H D+K DNVL++ + V +
Sbjct: 94 ALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKI 150
Query: 118 SDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGR--VSTNGDVYSFGIMLMETFTGK 175
SDFG +K L G + T+T T T+ YMAPE +G D++S G ++E TGK
Sbjct: 151 SDFGTSKRLAGIN-PCTETFT-GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
Query: 176 KPTYEF 181
P YE
Sbjct: 209 PPFYEL 214
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 104/244 (42%), Gaps = 25/244 (10%)
Query: 19 FDVECEMMKSIRHRNLIKVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLN 77
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 79 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 138
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQ 137
+ VA +++L S +H DL N +LD+ ++DFG+A+ ++ ++ +
Sbjct: 139 FGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNK 195
Query: 138 TLA--TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDW 195
T A + +MA E + + +T DV+SFG++L E T P Y N
Sbjct: 196 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN------------ 243
Query: 196 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIR 255
D + + + E C ++ + + C E R + E+V+++ I
Sbjct: 244 -------TFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 296
Query: 256 DSLL 259
+ +
Sbjct: 297 STFI 300
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 20/211 (9%)
Query: 2 EVAVKVFNLQCGRA---FKSFDVECEMMKSIRHRNLIKVISSCSNE----EFKALVLEYM 54
+VAVKV R + F E + ++ H ++ V + E +V+EY+
Sbjct: 39 DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYV 98
Query: 55 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLV 114
+L +++ + + + ++ D AL + H +IH D+KP N+L+
Sbjct: 99 DGVTLRDIVHTEGPMTP-KRAIEVIADACQALNFSHQNG---IIHRDVKPANILISATNA 154
Query: 115 AYLSDFGIAKLLIGEDQSMTQTQT-LATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 173
+ DFGIA+ + S+ QT + T Y++PE R V DVYS G +L E T
Sbjct: 155 VKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 174 GKKPTYEFFNGE----MTLKHWVNDWLPIST 200
G+ P F G+ + +H D +P S
Sbjct: 215 GEPP----FTGDSPVSVAYQHVREDPIPPSA 241
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 110/249 (44%), Gaps = 38/249 (15%)
Query: 22 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL---------YSSNCILD 71
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL YS N +
Sbjct: 75 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 134
Query: 72 IFQRLN------IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 125
++L+ VA +EYL S IH DL NVL+ ++ V ++DFG+A+
Sbjct: 135 PEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 191
Query: 126 LIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGE 185
+ D T + +MAPE + + DV+SFG++L E FT G
Sbjct: 192 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--------LGGS 243
Query: 186 MTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAK 245
P + V + L +E C + ++ + C P QR K
Sbjct: 244 -----------PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFK 292
Query: 246 EIVTKLLKI 254
++V L +I
Sbjct: 293 QLVEDLDRI 301
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 110/249 (44%), Gaps = 38/249 (15%)
Query: 22 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL---------YSSNCILD 71
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL YS N +
Sbjct: 72 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 131
Query: 72 IFQRLN------IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 125
++L+ VA +EYL S IH DL NVL+ ++ V ++DFG+A+
Sbjct: 132 PEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 188
Query: 126 LIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGE 185
+ D T + +MAPE + + DV+SFG++L E FT G
Sbjct: 189 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--------LGGS 240
Query: 186 MTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAK 245
P + V + L +E C + ++ + C P QR K
Sbjct: 241 -----------PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFK 289
Query: 246 EIVTKLLKI 254
++V L +I
Sbjct: 290 QLVEDLDRI 298
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 110/249 (44%), Gaps = 38/249 (15%)
Query: 22 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL---------YSSNCILD 71
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL YS N +
Sbjct: 124 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 183
Query: 72 IFQRLN------IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 125
++L+ VA +EYL S IH DL NVL+ ++ V ++DFG+A+
Sbjct: 184 PEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 240
Query: 126 LIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGE 185
+ D T + +MAPE + + DV+SFG++L E FT G
Sbjct: 241 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--------LGGS 292
Query: 186 MTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAK 245
P + V + L +E C + ++ + C P QR K
Sbjct: 293 -----------PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFK 341
Query: 246 EIVTKLLKI 254
++V L +I
Sbjct: 342 QLVEDLDRI 350
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 110/249 (44%), Gaps = 38/249 (15%)
Query: 22 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL---------YSSNCILD 71
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL YS N +
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 142
Query: 72 IFQRLN------IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 125
++L+ VA +EYL S IH DL NVL+ ++ V ++DFG+A+
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 199
Query: 126 LIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGE 185
+ D T + +MAPE + + DV+SFG++L E FT G
Sbjct: 200 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--------LGGS 251
Query: 186 MTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAK 245
P + V + L +E C + ++ + C P QR K
Sbjct: 252 -----------PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFK 300
Query: 246 EIVTKLLKI 254
++V L +I
Sbjct: 301 QLVEDLDRI 309
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 110/249 (44%), Gaps = 38/249 (15%)
Query: 22 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL---------YSSNCILD 71
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL YS N +
Sbjct: 76 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 135
Query: 72 IFQRLN------IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 125
++L+ VA +EYL S IH DL NVL+ ++ V ++DFG+A+
Sbjct: 136 PEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 192
Query: 126 LIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGE 185
+ D T + +MAPE + + DV+SFG++L E FT G
Sbjct: 193 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--------LGGS 244
Query: 186 MTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAK 245
P + V + L +E C + ++ + C P QR K
Sbjct: 245 -----------PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFK 293
Query: 246 EIVTKLLKI 254
++V L +I
Sbjct: 294 QLVEDLDRI 302
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 103/244 (42%), Gaps = 25/244 (10%)
Query: 19 FDVECEMMKSIRHRNLIKVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLN 77
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 78 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 137
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQ 137
+ VA +++L S +H DL N +LD+ ++DFG+A+ + ++ +
Sbjct: 138 FGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 194
Query: 138 TLA--TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDW 195
T A + +MA E + + +T DV+SFG++L E T P Y N
Sbjct: 195 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN------------ 242
Query: 196 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIR 255
D + + + E C ++ + + C E R + E+V+++ I
Sbjct: 243 -------TFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 295
Query: 256 DSLL 259
+ +
Sbjct: 296 STFI 299
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 110/259 (42%), Gaps = 32/259 (12%)
Query: 3 VAVKVFNLQCG-RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
VAVK N R F E +MK ++++++ S + +V+E M HG L+
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 62 YLYS---------SNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDN 112
YL S + + + + ++A + YL+ + +H DL N ++ +
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHD 166
Query: 113 LVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETF 172
+ DFG+ + + D + L + +MAPE ++G +T+ D++SFG++L E
Sbjct: 167 FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 226
Query: 173 TGKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMA 232
+ + Y+ + E LK V+D L Q D C V +L
Sbjct: 227 SLAEQPYQGLSNEQVLKF------------VMDGGYLDQPD-------NCPERVTDLMRM 267
Query: 233 CTVESPEQRINAKEIVTKL 251
C +P+ R EIV L
Sbjct: 268 CWQFNPKMRPTFLEIVNLL 286
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 110/249 (44%), Gaps = 38/249 (15%)
Query: 22 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL---------YSSNCILD 71
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL YS N +
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHN 142
Query: 72 IFQRLN------IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 125
++L+ VA +EYL S IH DL NVL+ ++ V ++DFG+A+
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 199
Query: 126 LIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGE 185
+ D T + +MAPE + + DV+SFG++L E FT G
Sbjct: 200 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--------LGGS 251
Query: 186 MTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAK 245
P + V + L +E C + ++ + C P QR K
Sbjct: 252 -----------PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFK 300
Query: 246 EIVTKLLKI 254
++V L +I
Sbjct: 301 QLVEDLDRI 309
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 110/259 (42%), Gaps = 32/259 (12%)
Query: 3 VAVKVFNLQCG-RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
VAVK N R F E +MK ++++++ S + +V+E M HG L+
Sbjct: 47 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 106
Query: 62 YLYS---------SNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDN 112
YL S + + + + ++A + YL+ + +H DL N ++ +
Sbjct: 107 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHD 163
Query: 113 LVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETF 172
+ DFG+ + + D + L + +MAPE ++G +T+ D++SFG++L E
Sbjct: 164 FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 223
Query: 173 TGKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMA 232
+ + Y+ + E LK V+D L Q D C V +L
Sbjct: 224 SLAEQPYQGLSNEQVLKF------------VMDGGYLDQPD-------NCPERVTDLMRM 264
Query: 233 CTVESPEQRINAKEIVTKL 251
C +P+ R EIV L
Sbjct: 265 CWQFNPKMRPTFLEIVNLL 283
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 103/244 (42%), Gaps = 25/244 (10%)
Query: 19 FDVECEMMKSIRHRNLIKVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLN 77
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 78 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 137
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQ 137
+ VA +++L S +H DL N +LD+ ++DFG+A+ + ++ +
Sbjct: 138 FGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 194
Query: 138 TLA--TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDW 195
T A + +MA E + + +T DV+SFG++L E T P Y N
Sbjct: 195 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN------------ 242
Query: 196 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIR 255
D + + + E C ++ + + C E R + E+V+++ I
Sbjct: 243 -------TFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 295
Query: 256 DSLL 259
+ +
Sbjct: 296 STFI 299
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 103/244 (42%), Gaps = 25/244 (10%)
Query: 19 FDVECEMMKSIRHRNLIKVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLN 77
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 79 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 138
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQ 137
+ VA +++L S +H DL N +LD+ ++DFG+A+ + ++ +
Sbjct: 139 FGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 195
Query: 138 TLA--TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDW 195
T A + +MA E + + +T DV+SFG++L E T P Y N
Sbjct: 196 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN------------ 243
Query: 196 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIR 255
D + + + E C ++ + + C E R + E+V+++ I
Sbjct: 244 -------TFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 296
Query: 256 DSLL 259
+ +
Sbjct: 297 STFI 300
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 96/180 (53%), Gaps = 11/180 (6%)
Query: 2 EVAVKVFNLQCGR-AFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLE 60
+VAVK L+ G + ++F E +MK+++H L+++ + + EE ++ EYM GSL
Sbjct: 39 KVAVK--TLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLL 96
Query: 61 KYLYSSNCILDIFQRL-NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
+L S + +L + +A + Y+ IH DL+ NVL+ ++L+ ++D
Sbjct: 97 DFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIAD 153
Query: 120 FGIAKLLIGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
FG+A+++ ED T + I + APE G + DV+SFGI+L E T GK P
Sbjct: 154 FGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIP 211
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 103/244 (42%), Gaps = 25/244 (10%)
Query: 19 FDVECEMMKSIRHRNLIKVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLN 77
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 83 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 142
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQ 137
+ VA +++L S +H DL N +LD+ ++DFG+A+ + ++ +
Sbjct: 143 FGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 199
Query: 138 TLA--TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDW 195
T A + +MA E + + +T DV+SFG++L E T P Y N
Sbjct: 200 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN------------ 247
Query: 196 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIR 255
D + + + E C ++ + + C E R + E+V+++ I
Sbjct: 248 -------TFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 300
Query: 256 DSLL 259
+ +
Sbjct: 301 STFI 304
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 103/244 (42%), Gaps = 25/244 (10%)
Query: 19 FDVECEMMKSIRHRNLIKVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLN 77
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 76 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 135
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQ 137
+ VA +++L S +H DL N +LD+ ++DFG+A+ + ++ +
Sbjct: 136 FGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 192
Query: 138 TLA--TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDW 195
T A + +MA E + + +T DV+SFG++L E T P Y N
Sbjct: 193 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN------------ 240
Query: 196 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIR 255
D + + + E C ++ + + C E R + E+V+++ I
Sbjct: 241 -------TFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 293
Query: 256 DSLL 259
+ +
Sbjct: 294 STFI 297
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 118/266 (44%), Gaps = 40/266 (15%)
Query: 3 VAVKVFNLQC-GRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
VA+K + G + F E + ++H N++ ++ + ++ +++ Y HG L +
Sbjct: 42 VAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHE 101
Query: 62 YLYSSNCILDIFQR---------------LNIMIDVASALEYLHFGCSAPVIHCDLKPDN 106
+L + D+ ++++ +A+ +EYL S V+H DL N
Sbjct: 102 FLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRN 158
Query: 107 VLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGI 166
VL+ D L +SD G+ + + D +L I +MAPE G+ S + D++S+G+
Sbjct: 159 VLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGV 218
Query: 167 MLMETFT-GKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSF 225
+L E F+ G +P + N ++ ++ + + C ++
Sbjct: 219 VLWEVFSYGLQPYCGYSNQDVV-------------------EMIRNRQV-LPCPDDCPAW 258
Query: 226 VFNLAMACTVESPEQRINAKEIVTKL 251
V+ L + C E P +R K+I ++L
Sbjct: 259 VYALMIECWNEFPSRRPRFKDIHSRL 284
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 109/252 (43%), Gaps = 43/252 (17%)
Query: 17 KSFDVECEMM-KSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI------ 69
+ F E E++ K H N+I ++ +C + + L +EY PHG+L +L S +
Sbjct: 70 RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAF 129
Query: 70 ---------LDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
L Q L+ DVA ++YL IH DL N+L+ +N VA ++DF
Sbjct: 130 AIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADF 186
Query: 121 GIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTY 179
G+++ G++ + +T + +MA E +TN DV+S+G++L E + G P
Sbjct: 187 GLSR---GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC 243
Query: 180 EFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPE 239
E+ K LP + C V++L C E P
Sbjct: 244 GMTCAELYEK------LP--------------QGYRLEKPLNCDDEVYDLMRQCWREKPY 283
Query: 240 QRINAKEIVTKL 251
+R + +I+ L
Sbjct: 284 ERPSFAQILVSL 295
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 79/156 (50%), Gaps = 4/156 (2%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++M + H +K+ + ++E L Y +G L KY+ + R +
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRF-YTAE 140
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ SALEYLH +IH DLKP+N+LL++++ ++DFG AK+L E + + T
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
Y++PE E S + D+++ G ++ + G P
Sbjct: 198 AQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 109/252 (43%), Gaps = 43/252 (17%)
Query: 17 KSFDVECEMM-KSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI------ 69
+ F E E++ K H N+I ++ +C + + L +EY PHG+L +L S +
Sbjct: 60 RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAF 119
Query: 70 ---------LDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
L Q L+ DVA ++YL IH DL N+L+ +N VA ++DF
Sbjct: 120 AIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADF 176
Query: 121 GIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTY 179
G+++ G++ + +T + +MA E +TN DV+S+G++L E + G P
Sbjct: 177 GLSR---GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC 233
Query: 180 EFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPE 239
E+ K LP + C V++L C E P
Sbjct: 234 GMTCAELYEK------LP--------------QGYRLEKPLNCDDEVYDLMRQCWREKPY 273
Query: 240 QRINAKEIVTKL 251
+R + +I+ L
Sbjct: 274 ERPSFAQILVSL 285
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 120/270 (44%), Gaps = 32/270 (11%)
Query: 3 VAVKVFNLQCG-RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
VA+K N R F E +MK ++++++ S + +++E M G L+
Sbjct: 52 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 111
Query: 62 YLYS------SNCIL---DIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDN 112
YL S +N +L + + + + ++A + YL+ + +H DL N ++ ++
Sbjct: 112 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAED 168
Query: 113 LVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETF 172
+ DFG+ + + D + L + +M+PE ++G +T DV+SFG++L E
Sbjct: 169 FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 228
Query: 173 TGKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMA 232
T + Y+ + E L+ V++ LL + D C +F L
Sbjct: 229 TLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD-------NCPDMLFELMRM 269
Query: 233 CTVESPEQRINAKEIVTKLLKIRDSLLRNV 262
C +P+ R + EI++ + + + R V
Sbjct: 270 CWQYNPKMRPSFLEIISSIKEEMEPGFREV 299
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 110/249 (44%), Gaps = 38/249 (15%)
Query: 22 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL-----------YSSNCI 69
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL Y N +
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 70 LD---IFQRL-NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 125
+ F+ L + +A +EYL S IH DL NVL+ +N V ++DFG+A+
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 126 LIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGE 185
+ D T + +MAPE + + DV+SFG+++ E FT G
Sbjct: 207 INNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--------LGGS 258
Query: 186 MTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAK 245
P + V + L +E C + ++ + C P QR K
Sbjct: 259 -----------PYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFK 307
Query: 246 EIVTKLLKI 254
++V L +I
Sbjct: 308 QLVEDLDRI 316
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 118/266 (44%), Gaps = 40/266 (15%)
Query: 3 VAVKVFNLQC-GRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
VA+K + G + F E + ++H N++ ++ + ++ +++ Y HG L +
Sbjct: 59 VAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHE 118
Query: 62 YLYSSNCILDIFQR---------------LNIMIDVASALEYLHFGCSAPVIHCDLKPDN 106
+L + D+ ++++ +A+ +EYL S V+H DL N
Sbjct: 119 FLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRN 175
Query: 107 VLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGI 166
VL+ D L +SD G+ + + D +L I +MAPE G+ S + D++S+G+
Sbjct: 176 VLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGV 235
Query: 167 MLMETFT-GKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSF 225
+L E F+ G +P + N ++ ++ + + C ++
Sbjct: 236 VLWEVFSYGLQPYCGYSNQDVV-------------------EMIRNRQV-LPCPDDCPAW 275
Query: 226 VFNLAMACTVESPEQRINAKEIVTKL 251
V+ L + C E P +R K+I ++L
Sbjct: 276 VYALMIECWNEFPSRRPRFKDIHSRL 301
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 111/266 (41%), Gaps = 34/266 (12%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
+VA+K + R K+F VE + + H N++K+ +C N LV+EY GSL
Sbjct: 33 DVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYN 88
Query: 62 YLYSSNCI--LDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL-DDNLVAYLS 118
L+ + + ++ + + + YLH +IH DLKP N+LL V +
Sbjct: 89 VLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKIC 148
Query: 119 DFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPT 178
DFG A D T + +MAPE S DV+S+GI+L E T +KP
Sbjct: 149 DFGTAC-----DIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPF 203
Query: 179 YEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESP 238
E + V++ T + NL + +L C + P
Sbjct: 204 DEIGGPAFRIMWAVHN----GTRPPLIKNLPKP--------------IESLMTRCWSKDP 245
Query: 239 EQRINAKEIVTKLLKIRDSLLRNVGG 264
QR + +EIV KI L+R G
Sbjct: 246 SQRPSMEEIV----KIMTHLMRYFPG 267
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 111/266 (41%), Gaps = 34/266 (12%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
+VA+K + R K+F VE + + H N++K+ +C N LV+EY GSL
Sbjct: 34 DVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYN 89
Query: 62 YLYSSNCI--LDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL-DDNLVAYLS 118
L+ + + ++ + + + YLH +IH DLKP N+LL V +
Sbjct: 90 VLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKIC 149
Query: 119 DFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPT 178
DFG A D T + +MAPE S DV+S+GI+L E T +KP
Sbjct: 150 DFGTAC-----DIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPF 204
Query: 179 YEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESP 238
E + V++ T + NL + +L C + P
Sbjct: 205 DEIGGPAFRIMWAVHN----GTRPPLIKNLPKP--------------IESLMTRCWSKDP 246
Query: 239 EQRINAKEIVTKLLKIRDSLLRNVGG 264
QR + +EIV KI L+R G
Sbjct: 247 SQRPSMEEIV----KIMTHLMRYFPG 268
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 110/249 (44%), Gaps = 38/249 (15%)
Query: 22 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL-----------YSSNCI 69
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL Y N +
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRV 149
Query: 70 LD---IFQRL-NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 125
+ F+ L + +A +EYL S IH DL NVL+ +N V ++DFG+A+
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 126 LIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGE 185
+ D T + +MAPE + + DV+SFG+++ E FT G
Sbjct: 207 INNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--------LGGS 258
Query: 186 MTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAK 245
P + V + L +E C + ++ + C P QR K
Sbjct: 259 -----------PYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFK 307
Query: 246 EIVTKLLKI 254
++V L +I
Sbjct: 308 QLVEDLDRI 316
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 103/244 (42%), Gaps = 25/244 (10%)
Query: 19 FDVECEMMKSIRHRNLIKVISSCSNEEFKALV-LEYMPHGSLEKYLYSSNCILDIFQRLN 77
F E +MK H N++ ++ C E LV L YM HG L ++ + + +
Sbjct: 137 FLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG 196
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQ 137
+ VA +++L S +H DL N +LD+ ++DFG+A+ + ++ +
Sbjct: 197 FGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 253
Query: 138 TLA--TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDW 195
T A + +MA E + + +T DV+SFG++L E T P Y N
Sbjct: 254 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN------------ 301
Query: 196 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIR 255
D + + + E C ++ + + C E R + E+V+++ I
Sbjct: 302 -------TFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 354
Query: 256 DSLL 259
+ +
Sbjct: 355 STFI 358
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 109/259 (42%), Gaps = 32/259 (12%)
Query: 3 VAVKVFNLQCG-RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
VAVK N R F E +MK ++++++ S + +V+E M HG L+
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 62 YLYS---------SNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDN 112
YL S + + + + ++A + YL+ + +H DL N ++ +
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHD 166
Query: 113 LVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETF 172
+ DFG+ + + D + L + +MAPE ++G +T+ D++SFG++L E
Sbjct: 167 FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 226
Query: 173 TGKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMA 232
+ + Y+ + E LK V+D L Q D C V +L
Sbjct: 227 SLAEQPYQGLSNEQVLKF------------VMDGGYLDQPD-------NCPERVTDLMRM 267
Query: 233 CTVESPEQRINAKEIVTKL 251
C +P R EIV L
Sbjct: 268 CWQFNPNMRPTFLEIVNLL 286
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 111/244 (45%), Gaps = 34/244 (13%)
Query: 16 FKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQR 75
F+ F E +M ++ H N++K+ N +V+E++P G L L + +
Sbjct: 67 FQEFQREVFIMSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVK 124
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL---DDN--LVAYLSDFGIAKLLIGED 130
L +M+D+A +EY+ + P++H DL+ N+ L D+N + A ++DF +++
Sbjct: 125 LRLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ------ 177
Query: 131 QSM-TQTQTLATIGYMAPEY--GREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMT 187
QS+ + + L +MAPE E + D YSF ++L TG+ P E+ G++
Sbjct: 178 QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK 237
Query: 188 LKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEI 247
N++ +E + E C + N+ C P++R + I
Sbjct: 238 F-----------------INMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYI 280
Query: 248 VTKL 251
V +L
Sbjct: 281 VKEL 284
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 110/249 (44%), Gaps = 38/249 (15%)
Query: 22 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL-----------YSSNCI 69
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL Y N +
Sbjct: 77 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 136
Query: 70 LD---IFQRL-NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 125
+ F+ L + +A +EYL S IH DL NVL+ +N V ++DFG+A+
Sbjct: 137 PEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARD 193
Query: 126 LIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGE 185
+ D T + +MAPE + + DV+SFG+++ E FT G
Sbjct: 194 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--------LGGS 245
Query: 186 MTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAK 245
P + V + L +E C + ++ + C P QR K
Sbjct: 246 -----------PYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFK 294
Query: 246 EIVTKLLKI 254
++V L +I
Sbjct: 295 QLVEDLDRI 303
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 110/249 (44%), Gaps = 38/249 (15%)
Query: 22 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL---------YSSNCILD 71
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL +S N +
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHN 142
Query: 72 IFQRLN------IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 125
++L+ VA +EYL S IH DL NVL+ ++ V ++DFG+A+
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 199
Query: 126 LIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGE 185
+ D T + +MAPE + + DV+SFG++L E FT G
Sbjct: 200 IHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--------LGGS 251
Query: 186 MTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAK 245
P + V + L +E C + ++ + C P QR K
Sbjct: 252 -----------PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFK 300
Query: 246 EIVTKLLKI 254
++V L +I
Sbjct: 301 QLVEDLDRI 309
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 110/249 (44%), Gaps = 38/249 (15%)
Query: 22 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL-----------YSSNCI 69
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL Y N +
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 70 LD---IFQRL-NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 125
+ F+ L + +A +EYL S IH DL NVL+ +N V ++DFG+A+
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARD 206
Query: 126 LIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGE 185
+ D T + +MAPE + + DV+SFG+++ E FT G
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--------LGGS 258
Query: 186 MTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAK 245
P + V + L +E C + ++ + C P QR K
Sbjct: 259 -----------PYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFK 307
Query: 246 EIVTKLLKI 254
++V L +I
Sbjct: 308 QLVEDLDRI 316
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 110/249 (44%), Gaps = 38/249 (15%)
Query: 22 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL-----------YSSNCI 69
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL Y N +
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 70 LD---IFQRL-NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 125
+ F+ L + +A +EYL S IH DL NVL+ +N V ++DFG+A+
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 126 LIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGE 185
+ D T + +MAPE + + DV+SFG+++ E FT G
Sbjct: 207 INNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--------LGGS 258
Query: 186 MTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAK 245
P + V + L +E C + ++ + C P QR K
Sbjct: 259 -----------PYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFK 307
Query: 246 EIVTKLLKI 254
++V L +I
Sbjct: 308 QLVEDLDRI 316
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 110/259 (42%), Gaps = 32/259 (12%)
Query: 3 VAVKVFNLQCG-RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
VAVK N R F E +MK ++++++ S + +V+E M HG L+
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 62 YLYS---------SNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDN 112
YL S + + + + ++A + YL+ + +H DL N ++ +
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHD 166
Query: 113 LVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETF 172
+ DFG+ + + D + L + +MAPE ++G +T+ D++SFG++L E
Sbjct: 167 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 226
Query: 173 TGKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMA 232
+ + Y+ + E LK V+D L Q D C V +L
Sbjct: 227 SLAEQPYQGLSNEQVLKF------------VMDGGYLDQPD-------NCPERVTDLMRM 267
Query: 233 CTVESPEQRINAKEIVTKL 251
C +P+ R EIV L
Sbjct: 268 CWQFNPKMRPTFLEIVNLL 286
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 110/249 (44%), Gaps = 38/249 (15%)
Query: 22 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL-----------YSSNCI 69
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL Y N +
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 70 LD---IFQRL-NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 125
+ F+ L + +A +EYL S IH DL NVL+ +N V ++DFG+A+
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 126 LIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGE 185
+ D T + +MAPE + + DV+SFG+++ E FT G
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--------LGGS 258
Query: 186 MTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAK 245
P + V + L +E C + ++ + C P QR K
Sbjct: 259 -----------PYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFK 307
Query: 246 EIVTKLLKI 254
++V L +I
Sbjct: 308 QLVEDLDRI 316
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 110/249 (44%), Gaps = 38/249 (15%)
Query: 22 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL-----------YSSNCI 69
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL Y N +
Sbjct: 90 EMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 70 LD---IFQRL-NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 125
+ F+ L + +A +EYL S IH DL NVL+ +N V ++DFG+A+
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 126 LIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGE 185
+ D T + +MAPE + + DV+SFG+++ E FT G
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--------LGGS 258
Query: 186 MTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAK 245
P + V + L +E C + ++ + C P QR K
Sbjct: 259 -----------PYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFK 307
Query: 246 EIVTKLLKI 254
++V L +I
Sbjct: 308 QLVEDLDRI 316
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 110/249 (44%), Gaps = 38/249 (15%)
Query: 22 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL-----------YSSNCI 69
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL Y N +
Sbjct: 136 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 195
Query: 70 LD---IFQRL-NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 125
+ F+ L + +A +EYL S IH DL NVL+ +N V ++DFG+A+
Sbjct: 196 PEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARD 252
Query: 126 LIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGE 185
+ D T + +MAPE + + DV+SFG+++ E FT G
Sbjct: 253 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--------LGGS 304
Query: 186 MTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAK 245
P + V + L +E C + ++ + C P QR K
Sbjct: 305 -----------PYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFK 353
Query: 246 EIVTKLLKI 254
++V L +I
Sbjct: 354 QLVEDLDRI 362
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 110/249 (44%), Gaps = 38/249 (15%)
Query: 22 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL-----------YSSNCI 69
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL Y N +
Sbjct: 82 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 141
Query: 70 LD---IFQRL-NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 125
+ F+ L + +A +EYL S IH DL NVL+ +N V ++DFG+A+
Sbjct: 142 PEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARD 198
Query: 126 LIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGE 185
+ D T + +MAPE + + DV+SFG+++ E FT G
Sbjct: 199 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--------LGGS 250
Query: 186 MTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAK 245
P + V + L +E C + ++ + C P QR K
Sbjct: 251 -----------PYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFK 299
Query: 246 EIVTKLLKI 254
++V L +I
Sbjct: 300 QLVEDLDRI 308
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 110/249 (44%), Gaps = 38/249 (15%)
Query: 22 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL-----------YSSNCI 69
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL Y N +
Sbjct: 79 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 138
Query: 70 LD---IFQRL-NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 125
+ F+ L + +A +EYL S IH DL NVL+ +N V ++DFG+A+
Sbjct: 139 PEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARD 195
Query: 126 LIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGE 185
+ D T + +MAPE + + DV+SFG+++ E FT G
Sbjct: 196 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--------LGGS 247
Query: 186 MTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAK 245
P + V + L +E C + ++ + C P QR K
Sbjct: 248 -----------PYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFK 296
Query: 246 EIVTKLLKI 254
++V L +I
Sbjct: 297 QLVEDLDRI 305
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 112/261 (42%), Gaps = 33/261 (12%)
Query: 3 VAVKVFNLQCG-RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
VAVK N R F E +MK ++++++ S + +V+E M HG L+
Sbjct: 49 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 108
Query: 62 YLYS---------SNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDN 112
YL S + + + + ++A + YL+ + +H DL N ++ +
Sbjct: 109 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHD 165
Query: 113 LVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETF 172
+ DFG+ + + D + L + +MAPE ++G +T+ D++SFG++L E
Sbjct: 166 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 225
Query: 173 TGKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMA 232
+ + Y+ + E LK V+D L Q D C V +L
Sbjct: 226 SLAEQPYQGLSNEQVLKF------------VMDGGYLDQPD-------NCPERVTDLMRM 266
Query: 233 CTVESPEQRINAKEIVTKLLK 253
C +P+ R EIV LLK
Sbjct: 267 CWQFNPKMRPTFLEIVN-LLK 286
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 110/249 (44%), Gaps = 38/249 (15%)
Query: 22 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL-----------YSSNCI 69
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL Y N +
Sbjct: 90 EMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 70 LD---IFQRL-NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 125
+ F+ L + +A +EYL S IH DL NVL+ +N V ++DFG+A+
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 126 LIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGE 185
+ D T + +MAPE + + DV+SFG+++ E FT G
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--------LGGS 258
Query: 186 MTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAK 245
P + V + L +E C + ++ + C P QR K
Sbjct: 259 -----------PYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFK 307
Query: 246 EIVTKLLKI 254
++V L +I
Sbjct: 308 QLVEDLDRI 316
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 120/270 (44%), Gaps = 32/270 (11%)
Query: 3 VAVKVFNLQCG-RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
VA+K N R F E +MK ++++++ S + +++E M G L+
Sbjct: 45 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 104
Query: 62 YLYS------SNCIL---DIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDN 112
YL S +N +L + + + + ++A + YL+ + +H DL N ++ ++
Sbjct: 105 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAED 161
Query: 113 LVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETF 172
+ DFG+ + + D + L + +M+PE ++G +T DV+SFG++L E
Sbjct: 162 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 221
Query: 173 TGKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMA 232
T + Y+ + E L+ V++ LL + D C +F L
Sbjct: 222 TLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD-------NCPDMLFELMRM 262
Query: 233 CTVESPEQRINAKEIVTKLLKIRDSLLRNV 262
C +P+ R + EI++ + + + R V
Sbjct: 263 CWQYNPKMRPSFLEIISSIKEEMEPGFREV 292
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 120/270 (44%), Gaps = 32/270 (11%)
Query: 3 VAVKVFNLQCG-RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
VA+K N R F E +MK ++++++ S + +++E M G L+
Sbjct: 49 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 108
Query: 62 YLYS------SNCIL---DIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDN 112
YL S +N +L + + + + ++A + YL+ + +H DL N ++ ++
Sbjct: 109 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAED 165
Query: 113 LVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETF 172
+ DFG+ + + D + L + +M+PE ++G +T DV+SFG++L E
Sbjct: 166 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 225
Query: 173 TGKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMA 232
T + Y+ + E L+ V++ LL + D C +F L
Sbjct: 226 TLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD-------NCPDMLFELMRM 266
Query: 233 CTVESPEQRINAKEIVTKLLKIRDSLLRNV 262
C +P+ R + EI++ + + + R V
Sbjct: 267 CWQYNPKMRPSFLEIISSIKEEMEPGFREV 296
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 120/270 (44%), Gaps = 32/270 (11%)
Query: 3 VAVKVFNLQCG-RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
VA+K N R F E +MK ++++++ S + +++E M G L+
Sbjct: 51 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 110
Query: 62 YLYS------SNCIL---DIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDN 112
YL S +N +L + + + + ++A + YL+ + +H DL N ++ ++
Sbjct: 111 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAED 167
Query: 113 LVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETF 172
+ DFG+ + + D + L + +M+PE ++G +T DV+SFG++L E
Sbjct: 168 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 227
Query: 173 TGKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMA 232
T + Y+ + E L+ V++ LL + D C +F L
Sbjct: 228 TLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD-------NCPDMLFELMRM 268
Query: 233 CTVESPEQRINAKEIVTKLLKIRDSLLRNV 262
C +P+ R + EI++ + + + R V
Sbjct: 269 CWQYNPKMRPSFLEIISSIKEEMEPGFREV 298
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 120/270 (44%), Gaps = 32/270 (11%)
Query: 3 VAVKVFNLQCG-RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
VA+K N R F E +MK ++++++ S + +++E M G L+
Sbjct: 48 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 107
Query: 62 YLYS------SNCIL---DIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDN 112
YL S +N +L + + + + ++A + YL+ + +H DL N ++ ++
Sbjct: 108 YLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAED 164
Query: 113 LVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETF 172
+ DFG+ + + D + L + +M+PE ++G +T DV+SFG++L E
Sbjct: 165 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 224
Query: 173 TGKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMA 232
T + Y+ + E L+ V++ LL + D C +F L
Sbjct: 225 TLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD-------NCPDMLFELMRM 265
Query: 233 CTVESPEQRINAKEIVTKLLKIRDSLLRNV 262
C +P+ R + EI++ + + + R V
Sbjct: 266 CWQYNPKMRPSFLEIISSIKEEMEPGFREV 295
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 11/188 (5%)
Query: 1 MEVAVKVFNLQCG-RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
+ VA+K+ N G +A F E +M S+ H +L++++ C + + LV + MPHG L
Sbjct: 68 IPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCL 126
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
+Y++ + LN + +A + YL ++H DL NVL+ ++D
Sbjct: 127 LEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITD 183
Query: 120 FGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLME--TFTGKK- 176
FG+A+LL G+++ I +MA E + + DV+S+G+ + E TF GK
Sbjct: 184 FGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPY 243
Query: 177 ---PTYEF 181
PT E
Sbjct: 244 DGIPTREI 251
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 11/188 (5%)
Query: 1 MEVAVKVFNLQCG-RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
+ VA+K+ N G +A F E +M S+ H +L++++ C + + LV + MPHG L
Sbjct: 45 IPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCL 103
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
+Y++ + LN + +A + YL ++H DL NVL+ ++D
Sbjct: 104 LEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITD 160
Query: 120 FGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLME--TFTGKK- 176
FG+A+LL G+++ I +MA E + + DV+S+G+ + E TF GK
Sbjct: 161 FGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPY 220
Query: 177 ---PTYEF 181
PT E
Sbjct: 221 DGIPTREI 228
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 120/270 (44%), Gaps = 32/270 (11%)
Query: 3 VAVKVFNLQCG-RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
VA+K N R F E +MK ++++++ S + +++E M G L+
Sbjct: 52 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 111
Query: 62 YLYS------SNCIL---DIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDN 112
YL S +N +L + + + + ++A + YL+ + +H DL N ++ ++
Sbjct: 112 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAED 168
Query: 113 LVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETF 172
+ DFG+ + + D + L + +M+PE ++G +T DV+SFG++L E
Sbjct: 169 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 228
Query: 173 TGKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMA 232
T + Y+ + E L+ V++ LL + D C +F L
Sbjct: 229 TLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD-------NCPDMLFELMRM 269
Query: 233 CTVESPEQRINAKEIVTKLLKIRDSLLRNV 262
C +P+ R + EI++ + + + R V
Sbjct: 270 CWQYNPKMRPSFLEIISSIKEEMEPGFREV 299
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 120/270 (44%), Gaps = 32/270 (11%)
Query: 3 VAVKVFNLQCG-RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
VA+K N R F E +MK ++++++ S + +++E M G L+
Sbjct: 51 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 110
Query: 62 YLYS------SNCIL---DIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDN 112
YL S +N +L + + + + ++A + YL+ + +H DL N ++ ++
Sbjct: 111 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAED 167
Query: 113 LVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETF 172
+ DFG+ + + D + L + +M+PE ++G +T DV+SFG++L E
Sbjct: 168 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 227
Query: 173 TGKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMA 232
T + Y+ + E L+ V++ LL + D C +F L
Sbjct: 228 TLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD-------NCPDMLFELMRM 268
Query: 233 CTVESPEQRINAKEIVTKLLKIRDSLLRNV 262
C +P+ R + EI++ + + + R V
Sbjct: 269 CWQYNPKMRPSFLEIISSIKEEMEPGFREV 298
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++M + H +K+ + ++E L Y +G L KY+ + R +
Sbjct: 79 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 137
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ SALEYLH +IH DLKP+N+LL++++ ++DFG AK+L E + + T
Sbjct: 138 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 194
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
Y++PE E + D+++ G ++ + G P
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++M + H +K+ + ++E L Y +G L KY+ + R +
Sbjct: 64 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 122
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ SALEYLH +IH DLKP+N+LL++++ ++DFG AK+L E + + T
Sbjct: 123 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 179
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
Y++PE E + D+++ G ++ + G P
Sbjct: 180 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++M + H +K+ + ++E L Y +G L KY+ + R +
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 140
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ SALEYLH +IH DLKP+N+LL++++ ++DFG AK+L E + + T
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
Y++PE E + D+++ G ++ + G P
Sbjct: 198 AQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 120/270 (44%), Gaps = 32/270 (11%)
Query: 3 VAVKVFNLQCG-RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
VA+K N R F E +MK ++++++ S + +++E M G L+
Sbjct: 80 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 139
Query: 62 YLYS------SNCIL---DIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDN 112
YL S +N +L + + + + ++A + YL+ + +H DL N ++ ++
Sbjct: 140 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAED 196
Query: 113 LVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETF 172
+ DFG+ + + D + L + +M+PE ++G +T DV+SFG++L E
Sbjct: 197 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 256
Query: 173 TGKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMA 232
T + Y+ + E L+ V++ LL + D C +F L
Sbjct: 257 TLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD-------NCPDMLFELMRM 297
Query: 233 CTVESPEQRINAKEIVTKLLKIRDSLLRNV 262
C +P+ R + EI++ + + + R V
Sbjct: 298 CWQYNPKMRPSFLEIISSIKEEMEPGFREV 327
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 109/249 (43%), Gaps = 38/249 (15%)
Query: 22 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL---------YSSNCILD 71
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL Y N +
Sbjct: 68 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHN 127
Query: 72 IFQRLN------IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 125
++L+ VA +EYL S IH DL NVL+ ++ V ++DFG+A+
Sbjct: 128 PEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 184
Query: 126 LIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGE 185
+ D T + +MAPE + + DV+SFG++L E FT G
Sbjct: 185 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--------LGGS 236
Query: 186 MTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAK 245
P + V + L +E C + ++ + C P QR K
Sbjct: 237 -----------PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFK 285
Query: 246 EIVTKLLKI 254
++V L +I
Sbjct: 286 QLVEDLDRI 294
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++M + H +K+ + ++E L Y +G L KY+ + R +
Sbjct: 58 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 116
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ SALEYLH +IH DLKP+N+LL++++ ++DFG AK+L E + + T
Sbjct: 117 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 173
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
Y++PE E + D+++ G ++ + G P
Sbjct: 174 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 120/270 (44%), Gaps = 32/270 (11%)
Query: 3 VAVKVFNLQCG-RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
VA+K N R F E +MK ++++++ S + +++E M G L+
Sbjct: 58 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 117
Query: 62 YLYS------SNCIL---DIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDN 112
YL S +N +L + + + + ++A + YL+ + +H DL N ++ ++
Sbjct: 118 YLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAED 174
Query: 113 LVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETF 172
+ DFG+ + + D + L + +M+PE ++G +T DV+SFG++L E
Sbjct: 175 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 234
Query: 173 TGKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMA 232
T + Y+ + E L+ V++ LL + D C +F L
Sbjct: 235 TLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD-------NCPDMLFELMRM 275
Query: 233 CTVESPEQRINAKEIVTKLLKIRDSLLRNV 262
C +P+ R + EI++ + + + R V
Sbjct: 276 CWQYNPKMRPSFLEIISSIKEEMEPGFREV 305
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 120/270 (44%), Gaps = 32/270 (11%)
Query: 3 VAVKVFNLQCG-RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
VA+K N R F E +MK ++++++ S + +++E M G L+
Sbjct: 58 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 117
Query: 62 YLYS------SNCIL---DIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDN 112
YL S +N +L + + + + ++A + YL+ + +H DL N ++ ++
Sbjct: 118 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAED 174
Query: 113 LVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETF 172
+ DFG+ + + D + L + +M+PE ++G +T DV+SFG++L E
Sbjct: 175 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 234
Query: 173 TGKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMA 232
T + Y+ + E L+ V++ LL + D C +F L
Sbjct: 235 TLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD-------NCPDMLFELMRM 275
Query: 233 CTVESPEQRINAKEIVTKLLKIRDSLLRNV 262
C +P+ R + EI++ + + + R V
Sbjct: 276 CWQYNPKMRPSFLEIISSIKEEMEPGFREV 305
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++M + H +K+ + ++E L Y +G L KY+ + R +
Sbjct: 57 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 115
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ SALEYLH +IH DLKP+N+LL++++ ++DFG AK+L E + + T
Sbjct: 116 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 172
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
Y++PE E + D+++ G ++ + G P
Sbjct: 173 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++M + H +K+ + ++E L Y +G L KY+ + R +
Sbjct: 79 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 137
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ SALEYLH +IH DLKP+N+LL++++ ++DFG AK+L E + + T
Sbjct: 138 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 194
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
Y++PE E + D+++ G ++ + G P
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++M + H +K+ + ++E L Y +G L KY+ + R +
Sbjct: 59 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 117
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ SALEYLH +IH DLKP+N+LL++++ ++DFG AK+L E + + T
Sbjct: 118 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 174
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
Y++PE E + D+++ G ++ + G P
Sbjct: 175 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 88/176 (50%), Gaps = 7/176 (3%)
Query: 2 EVAVKVFNLQCG-RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKA--LVLEYMPHGS 58
+VAVK + G E E+++++ H N++K C+ + L++E++P GS
Sbjct: 52 QVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGS 111
Query: 59 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
L++YL + +++ Q+L + + ++YL S +H DL NVL++ +
Sbjct: 112 LKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIG 168
Query: 119 DFGIAKLLIGEDQSMT-QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 173
DFG+ K + + + T + + + + APE + + DV+SFG+ L E T
Sbjct: 169 DFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++M + H +K+ + ++E L Y +G L KY+ + R +
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 138
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ SALEYLH +IH DLKP+N+LL++++ ++DFG AK+L E + + T
Sbjct: 139 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
Y++PE E + D+++ G ++ + G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++M + H +K+ + ++E L Y +G L KY+ + R +
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 138
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ SALEYLH +IH DLKP+N+LL++++ ++DFG AK+L E + + T
Sbjct: 139 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
Y++PE E + D+++ G ++ + G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++M + H +K+ + ++E L Y +G L KY+ + R +
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 138
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ SALEYLH +IH DLKP+N+LL++++ ++DFG AK+L E + + T
Sbjct: 139 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
Y++PE E + D+++ G ++ + G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++M + H +K+ + ++E L Y +G L KY+ + R +
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 138
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ SALEYLH +IH DLKP+N+LL++++ ++DFG AK+L E + + T
Sbjct: 139 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
Y++PE E + D+++ G ++ + G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 88/176 (50%), Gaps = 7/176 (3%)
Query: 2 EVAVKVFNLQCG-RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKA--LVLEYMPHGS 58
+VAVK + G E E+++++ H N++K C+ + L++E++P GS
Sbjct: 40 QVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGS 99
Query: 59 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
L++YL + +++ Q+L + + ++YL S +H DL NVL++ +
Sbjct: 100 LKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIG 156
Query: 119 DFGIAKLLIGEDQSMT-QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 173
DFG+ K + + + T + + + + APE + + DV+SFG+ L E T
Sbjct: 157 DFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++M + H +K+ + ++E L Y +G L KY+ + R +
Sbjct: 83 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 141
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ SALEYLH +IH DLKP+N+LL++++ ++DFG AK+L E + + T
Sbjct: 142 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
Y++PE E + D+++ G ++ + G P
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++M + H +K+ + ++E L Y +G L KY+ + R +
Sbjct: 60 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 118
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ SALEYLH +IH DLKP+N+LL++++ ++DFG AK+L E + + T
Sbjct: 119 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 175
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
Y++PE E + D+++ G ++ + G P
Sbjct: 176 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++M + H +K+ + ++E L Y +G L KY+ + R +
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 140
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ SALEYLH +IH DLKP+N+LL++++ ++DFG AK+L E + + T
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
Y++PE E + D+++ G ++ + G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++M + H +K+ + ++E L Y +G L KY+ + R +
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 140
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ SALEYLH +IH DLKP+N+LL++++ ++DFG AK+L E + + T
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
Y++PE E + D+++ G ++ + G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 109/249 (43%), Gaps = 38/249 (15%)
Query: 22 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL---------YSSNCILD 71
E EMMK I +H+N+I ++ +C+ + +++EY G+L +YL Y N +
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHN 142
Query: 72 IFQRLN------IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 125
++L+ VA +EYL S IH DL NVL+ ++ V ++DFG+A+
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 199
Query: 126 LIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGE 185
+ D T + +MAPE + + DV+SFG++L E FT G
Sbjct: 200 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--------LGGS 251
Query: 186 MTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAK 245
P + V + L +E C + ++ + C P QR K
Sbjct: 252 -----------PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFK 300
Query: 246 EIVTKLLKI 254
++V L +I
Sbjct: 301 QLVEDLDRI 309
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++M + H +K+ + ++E L Y +G L KY+ + R +
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 140
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ SALEYLH +IH DLKP+N+LL++++ ++DFG AK+L E + + T
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
Y++PE E + D+++ G ++ + G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++M + H +K+ + ++E L Y +G L KY+ + R +
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 140
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ SALEYLH +IH DLKP+N+LL++++ ++DFG AK+L E + + T
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
Y++PE E + D+++ G ++ + G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++M + H +K+ + ++E L Y +G L KY+ + R +
Sbjct: 85 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 143
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ SALEYLH +IH DLKP+N+LL++++ ++DFG AK+L E + + T
Sbjct: 144 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
Y++PE E + D+++ G ++ + G P
Sbjct: 201 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++M + H +K+ + ++E L Y +G L KY+ + R +
Sbjct: 83 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 141
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ SALEYLH +IH DLKP+N+LL++++ ++DFG AK+L E + + T
Sbjct: 142 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
Y++PE E + D+++ G ++ + G P
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 109/252 (43%), Gaps = 43/252 (17%)
Query: 17 KSFDVECEMM-KSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI------ 69
+ F E E++ K H N+I ++ +C + + L +EY PHG+L +L S +
Sbjct: 67 RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAF 126
Query: 70 ---------LDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
L Q L+ DVA ++YL IH +L N+L+ +N VA ++DF
Sbjct: 127 AIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADF 183
Query: 121 GIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTY 179
G+++ G++ + +T + +MA E +TN DV+S+G++L E + G P
Sbjct: 184 GLSR---GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC 240
Query: 180 EFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPE 239
E+ K LP + C V++L C E P
Sbjct: 241 GMTCAELYEK------LP--------------QGYRLEKPLNCDDEVYDLMRQCWREKPY 280
Query: 240 QRINAKEIVTKL 251
+R + +I+ L
Sbjct: 281 ERPSFAQILVSL 292
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 119/270 (44%), Gaps = 32/270 (11%)
Query: 3 VAVKVFNLQCG-RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
VA+K N R F E +MK ++++++ S + +++E M G L+
Sbjct: 43 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 102
Query: 62 YLYS------SNCIL---DIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDN 112
YL S +N +L + + + + ++A + YL+ + +H DL N ++ ++
Sbjct: 103 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAED 159
Query: 113 LVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETF 172
+ DFG+ + + D + L + +M+PE ++G +T DV+SFG++L E
Sbjct: 160 FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 219
Query: 173 TGKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMA 232
T + Y+ + E L+ V++ LL + D C + L
Sbjct: 220 TLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD-------NCPDMLLELMRM 260
Query: 233 CTVESPEQRINAKEIVTKLLKIRDSLLRNV 262
C +P+ R + EI++ + + + R V
Sbjct: 261 CWQYNPKMRPSFLEIISSIKEEMEPGFREV 290
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 110/242 (45%), Gaps = 38/242 (15%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
+VAVK + ++F E +MK+++H L+K+ + + E ++ E+M GSL
Sbjct: 208 KVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPI-YIITEFMAKGSLLD 265
Query: 62 YLYSSNCILDIFQRLNIMIDVASAL-EYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
+L S Q L +ID ++ + E + F IH DL+ N+L+ +LV ++DF
Sbjct: 266 FLKSDEGSK---QPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADF 322
Query: 121 GIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTY 179
G+A++ I + APE G + DV+SFGI+LME T G+ P
Sbjct: 323 GLARV-----------GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP-- 369
Query: 180 EFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPE 239
+ G +S EV+ A + E C ++N+ M C PE
Sbjct: 370 --YPG-------------MSNPEVIRA---LERGYRMPRPENCPEELYNIMMRCWKNRPE 411
Query: 240 QR 241
+R
Sbjct: 412 ER 413
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 4/156 (2%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++M + H +K+ ++E L Y +G L KY+ + R +
Sbjct: 87 ERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAE 145
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ SALEYLH +IH DLKP+N+LL++++ ++DFG AK+L E + + T
Sbjct: 146 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 202
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
Y++PE E + D+++ G ++ + G P
Sbjct: 203 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 109/249 (43%), Gaps = 38/249 (15%)
Query: 22 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL-----------YSSNCI 69
E EMMK I +H+N+I ++ +C+ + +++ Y G+L +YL Y N +
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 70 LD---IFQRL-NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 125
+ F+ L + +A +EYL S IH DL NVL+ +N V ++DFG+A+
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 126 LIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGE 185
+ D T + +MAPE + + DV+SFG+++ E FT G
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--------LGGS 258
Query: 186 MTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAK 245
P + V + L +E C + ++ + C P QR K
Sbjct: 259 -----------PYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFK 307
Query: 246 EIVTKLLKI 254
++V L +I
Sbjct: 308 QLVEDLDRI 316
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 109/259 (42%), Gaps = 32/259 (12%)
Query: 3 VAVKVFNLQCG-RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
VAVK N R F E +MK ++++++ S + +V+E M HG L+
Sbjct: 51 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 110
Query: 62 YLYS---------SNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDN 112
YL S + + + + ++A + YL+ + +H +L N ++ +
Sbjct: 111 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHD 167
Query: 113 LVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETF 172
+ DFG+ + + D + L + +MAPE ++G +T+ D++SFG++L E
Sbjct: 168 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 227
Query: 173 TGKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMA 232
+ + Y+ + E LK V+D L Q D C V +L
Sbjct: 228 SLAEQPYQGLSNEQVLKF------------VMDGGYLDQPD-------NCPERVTDLMRM 268
Query: 233 CTVESPEQRINAKEIVTKL 251
C +P R EIV L
Sbjct: 269 CWQFNPNMRPTFLEIVNLL 287
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 89/179 (49%), Gaps = 6/179 (3%)
Query: 1 MEVAVKVFNLQCGR-AFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
+ V +KV + GR +F++ + S+ H ++++++ C + LV +Y+P GSL
Sbjct: 43 IPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSL 101
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
++ L LN + +A + YL ++H +L NVLL ++D
Sbjct: 102 LDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVAD 158
Query: 120 FGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
FG+A LL +D+ + ++ I +MA E G+ + DV+S+G+ + E T G +P
Sbjct: 159 FGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP 217
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 109/259 (42%), Gaps = 32/259 (12%)
Query: 3 VAVKVFNLQCG-RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
VAVK N R F E +MK ++++++ S + +V+E M HG L+
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 62 YLYS---------SNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDN 112
YL S + + + + ++A + YL+ + +H +L N ++ +
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHD 166
Query: 113 LVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETF 172
+ DFG+ + + D + L + +MAPE ++G +T+ D++SFG++L E
Sbjct: 167 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 226
Query: 173 TGKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMA 232
+ + Y+ + E LK V+D L Q D C V +L
Sbjct: 227 SLAEQPYQGLSNEQVLKF------------VMDGGYLDQPD-------NCPERVTDLMRM 267
Query: 233 CTVESPEQRINAKEIVTKL 251
C +P R EIV L
Sbjct: 268 CWQFNPNMRPTFLEIVNLL 286
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 96/180 (53%), Gaps = 11/180 (6%)
Query: 2 EVAVKVFNLQCGR-AFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLE 60
+VAVK L+ G + ++F E +MK+++H L+++ + + EE ++ E+M GSL
Sbjct: 38 KVAVK--TLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLL 95
Query: 61 KYLYSSNCILDIFQRL-NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
+L S + +L + +A + Y+ IH DL+ NVL+ ++L+ ++D
Sbjct: 96 DFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIAD 152
Query: 120 FGIAKLLIGEDQSMTQTQTLA-TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
FG+A+++ ED T + I + APE G + +V+SFGI+L E T GK P
Sbjct: 153 FGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIP 210
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 82/166 (49%), Gaps = 15/166 (9%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 76
++F E ++M+ + H N++K I ++ + EY+ G+L + S + QR+
Sbjct: 52 RTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRV 111
Query: 77 NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQT 136
+ D+AS + YLH S +IH DL N L+ +N ++DFG+A+L++ E
Sbjct: 112 SFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGL 168
Query: 137 QTL---------ATIG---YMAPEYGREGRVSTNGDVYSFGIMLME 170
++L +G +MAPE DV+SFGI+L E
Sbjct: 169 RSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCE 214
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 109/249 (43%), Gaps = 38/249 (15%)
Query: 22 ECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL-----------YSSNCI 69
E EMMK I +H+N+I ++ +C+ + +++ Y G+L +YL Y N +
Sbjct: 90 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 70 LD---IFQRL-NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL 125
+ F+ L + +A +EYL S IH DL NVL+ +N V ++DFG+A+
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 126 LIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGE 185
+ D T + +MAPE + + DV+SFG+++ E FT G
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--------LGGS 258
Query: 186 MTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAK 245
P + V + L +E C + ++ + C P QR K
Sbjct: 259 -----------PYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFK 307
Query: 246 EIVTKLLKI 254
++V L +I
Sbjct: 308 QLVEDLDRI 316
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 89/179 (49%), Gaps = 6/179 (3%)
Query: 1 MEVAVKVFNLQCGR-AFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
+ V +KV + GR +F++ + S+ H ++++++ C + LV +Y+P GSL
Sbjct: 61 IPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSL 119
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
++ L LN + +A + YL ++H +L NVLL ++D
Sbjct: 120 LDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVAD 176
Query: 120 FGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
FG+A LL +D+ + ++ I +MA E G+ + DV+S+G+ + E T G +P
Sbjct: 177 FGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP 235
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 88/188 (46%), Gaps = 10/188 (5%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKV--ISSCSNEEFKALVLEYMPHGSLE 60
VAVK + F E +++K++ ++K +S + LV+EY+P G L
Sbjct: 55 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 114
Query: 61 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
+L LD + L + +EYL S +H DL N+L++ ++DF
Sbjct: 115 DFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADF 171
Query: 121 GIAKLL-IGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT----GK 175
G+AKLL + +D + + + I + APE + S DV+SFG++L E FT
Sbjct: 172 GLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSC 231
Query: 176 KPTYEFFN 183
P+ EF
Sbjct: 232 SPSAEFLR 239
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 87/188 (46%), Gaps = 10/188 (5%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKV--ISSCSNEEFKALVLEYMPHGSLE 60
VAVK + F E +++K++ ++K +S LV+EY+P G L
Sbjct: 39 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLR 98
Query: 61 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
+L LD + L + +EYL S +H DL N+L++ ++DF
Sbjct: 99 DFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADF 155
Query: 121 GIAKLL-IGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT----GK 175
G+AKLL + +D + + + I + APE + S DV+SFG++L E FT
Sbjct: 156 GLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSC 215
Query: 176 KPTYEFFN 183
P+ EF
Sbjct: 216 SPSAEFLR 223
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 88/188 (46%), Gaps = 10/188 (5%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKV--ISSCSNEEFKALVLEYMPHGSLE 60
VAVK + F E +++K++ ++K +S + LV+EY+P G L
Sbjct: 42 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 101
Query: 61 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
+L LD + L + +EYL S +H DL N+L++ ++DF
Sbjct: 102 DFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADF 158
Query: 121 GIAKLL-IGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT----GK 175
G+AKLL + +D + + + I + APE + S DV+SFG++L E FT
Sbjct: 159 GLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSC 218
Query: 176 KPTYEFFN 183
P+ EF
Sbjct: 219 SPSAEFLR 226
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 109/259 (42%), Gaps = 32/259 (12%)
Query: 3 VAVKVFNLQCG-RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
VAVK N R F E +MK ++++++ S + +V+E M HG L+
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 62 YLYS---------SNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDN 112
YL S + + + + ++A + YL+ + +H DL N ++ +
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHD 166
Query: 113 LVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETF 172
+ DFG+ + + + L + +MAPE ++G +T+ D++SFG++L E
Sbjct: 167 FTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 226
Query: 173 TGKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMA 232
+ + Y+ + E LK V+D L Q D C V +L
Sbjct: 227 SLAEQPYQGLSNEQVLKF------------VMDGGYLDQPD-------NCPERVTDLMRM 267
Query: 233 CTVESPEQRINAKEIVTKL 251
C +P+ R EIV L
Sbjct: 268 CWQFNPKMRPTFLEIVNLL 286
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 106/246 (43%), Gaps = 25/246 (10%)
Query: 17 KSFDVECEMMKSIRHRNLIKVIS-SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQR 75
++F E +M+ + H N++ +I E ++L YM HG L +++ S +
Sbjct: 67 EAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDL 126
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
++ + VA +EYL +H DL N +LD++ ++DFG+A+ ++ + Q
Sbjct: 127 ISFGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQ 183
Query: 136 TQTLA--TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVN 193
A + + A E + R +T DV+SFG++L E T P Y + L H+
Sbjct: 184 QHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID-PFDLTHF-- 240
Query: 194 DWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK 253
+ L Q E C ++ + C P R + +V ++ +
Sbjct: 241 ---------LAQGRRLPQ-------PEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQ 284
Query: 254 IRDSLL 259
I +LL
Sbjct: 285 IVSALL 290
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 88/188 (46%), Gaps = 10/188 (5%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKV--ISSCSNEEFKALVLEYMPHGSLE 60
VAVK + F E +++K++ ++K +S + LV+EY+P G L
Sbjct: 43 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 102
Query: 61 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
+L LD + L + +EYL S +H DL N+L++ ++DF
Sbjct: 103 DFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADF 159
Query: 121 GIAKLL-IGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT----GK 175
G+AKLL + +D + + + I + APE + S DV+SFG++L E FT
Sbjct: 160 GLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSC 219
Query: 176 KPTYEFFN 183
P+ EF
Sbjct: 220 SPSAEFLR 227
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 109/264 (41%), Gaps = 48/264 (18%)
Query: 3 VAVKVFNLQCGRAFKS-FDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
VAVK+ + ++ F E +M + N++K++ C+ + L+ EYM +G L +
Sbjct: 80 VAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNE 139
Query: 62 YLYS-----------------------SNCILDIFQRLNIMIDVASALEYLHFGCSAPVI 98
+L S L ++L I VA+ + YL +
Sbjct: 140 FLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFV 196
Query: 99 HCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTN 158
H DL N L+ +N+V ++DFG+++ + D I +M PE R +T
Sbjct: 197 HRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTE 256
Query: 159 GDVYSFGIMLMETFT-GKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFV 217
DV+++G++L E F+ G +P Y + E+ V D N+L+
Sbjct: 257 SDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYY-------------VRDGNILA------- 296
Query: 218 AKEQCVSFVFNLAMACTVESPEQR 241
E C ++NL C + P R
Sbjct: 297 CPENCPLELYNLMRLCWSKLPADR 320
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 118/270 (43%), Gaps = 32/270 (11%)
Query: 3 VAVKVFNLQCG-RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
VA+K N R F E +MK ++++++ S + +++E M G L+
Sbjct: 45 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 104
Query: 62 YLYS------SNCIL---DIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDN 112
YL S +N +L + + + + ++A + YL+ + +H DL N + ++
Sbjct: 105 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCXVAED 161
Query: 113 LVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETF 172
+ DFG+ + + D + L + +M+PE ++G +T DV+SFG++L E
Sbjct: 162 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 221
Query: 173 TGKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMA 232
T + Y+ + E L+ V++ LL + D C + L
Sbjct: 222 TLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD-------NCPDMLLELMRM 262
Query: 233 CTVESPEQRINAKEIVTKLLKIRDSLLRNV 262
C +P+ R + EI++ + + + R V
Sbjct: 263 CWQYNPKMRPSFLEIISSIKEEMEPGFREV 292
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 94/245 (38%), Gaps = 30/245 (12%)
Query: 3 VAVKVFN---LQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
VAVK L A F E M S+ HRNLI++ K +V E P GSL
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSL 97
Query: 60 EKYL--YSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYL 117
L + + +L R + VA + YL S IH DL N+LL + +
Sbjct: 98 LDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKI 152
Query: 118 SDFGIAKLLI-GEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKK 176
DFG+ + L +D + Q + APE + S D + FG+ L E FT +
Sbjct: 153 GDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 212
Query: 177 PTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVE 236
+ NG L + + +E E C ++N+ + C
Sbjct: 213 EPWIGLNGSQIL------------------HKIDKEGERLPRPEDCPQDIYNVMVQCWAH 254
Query: 237 SPEQR 241
PE R
Sbjct: 255 KPEDR 259
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 108/265 (40%), Gaps = 32/265 (12%)
Query: 3 VAVKVFN---LQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
VAVK L A F E M S+ HRNLI++ K +V E P GSL
Sbjct: 49 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSL 107
Query: 60 EKYL--YSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYL 117
L + + +L R + VA + YL S IH DL N+LL + +
Sbjct: 108 LDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKI 162
Query: 118 SDFGIAKLLI-GEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GK 175
DFG+ + L +D + Q + APE + S D + FG+ L E FT G+
Sbjct: 163 GDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 222
Query: 176 KPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTV 235
+P W+ ++ +++ + + +E E C ++N+ + C
Sbjct: 223 EP-----------------WIGLNGSQIL--HKIDKEGERLPRPEDCPQDIYNVMVQCWA 263
Query: 236 ESPEQRINAKEIVTKLLKIRDSLLR 260
PE R + LL+ + + +R
Sbjct: 264 HKPEDRPTFVALRDFLLEAQPTDMR 288
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 95/247 (38%), Gaps = 30/247 (12%)
Query: 1 MEVAVKVFN---LQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHG 57
+ VAVK L A F E M S+ HRNLI++ K +V E P G
Sbjct: 41 VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLG 99
Query: 58 SLEKYL--YSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVA 115
SL L + + +L R + VA + YL S IH DL N+LL +
Sbjct: 100 SLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLV 154
Query: 116 YLSDFGIAKLLI-GEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTG 174
+ DFG+ + L +D + Q + APE + S D + FG+ L E FT
Sbjct: 155 KIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTY 214
Query: 175 KKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACT 234
+ + NG L + + +E E C ++N+ + C
Sbjct: 215 GQEPWIGLNGSQIL------------------HKIDKEGERLPRPEDCPQDIYNVMVQCW 256
Query: 235 VESPEQR 241
PE R
Sbjct: 257 AHKPEDR 263
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 100/246 (40%), Gaps = 32/246 (13%)
Query: 3 VAVKVFN---LQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
VAVK L A F E M S+ HRNLI++ K +V E P GSL
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSL 97
Query: 60 EKYL--YSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYL 117
L + + +L R + VA + YL S IH DL N+LL + +
Sbjct: 98 LDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKI 152
Query: 118 SDFGIAKLLI-GEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GK 175
DFG+ + L +D + Q + APE + S D + FG+ L E FT G+
Sbjct: 153 GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 212
Query: 176 KPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTV 235
+P W+ ++ +++ + + +E E C ++N+ + C
Sbjct: 213 EP-----------------WIGLNGSQIL--HKIDKEGERLPRPEDCPQDIYNVMVQCWA 253
Query: 236 ESPEQR 241
PE R
Sbjct: 254 HKPEDR 259
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 108/265 (40%), Gaps = 32/265 (12%)
Query: 3 VAVKVFN---LQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
VAVK L A F E M S+ HRNLI++ K +V E P GSL
Sbjct: 49 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSL 107
Query: 60 EKYL--YSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYL 117
L + + +L R + VA + YL S IH DL N+LL + +
Sbjct: 108 LDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKI 162
Query: 118 SDFGIAKLLI-GEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GK 175
DFG+ + L +D + Q + APE + S D + FG+ L E FT G+
Sbjct: 163 GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 222
Query: 176 KPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTV 235
+P W+ ++ +++ + + +E E C ++N+ + C
Sbjct: 223 EP-----------------WIGLNGSQIL--HKIDKEGERLPRPEDCPQDIYNVMVQCWA 263
Query: 236 ESPEQRINAKEIVTKLLKIRDSLLR 260
PE R + LL+ + + +R
Sbjct: 264 HKPEDRPTFVALRDFLLEAQPTDMR 288
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 94/245 (38%), Gaps = 30/245 (12%)
Query: 3 VAVKVFN---LQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
VAVK L A F E M S+ HRNLI++ K +V E P GSL
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSL 97
Query: 60 EKYL--YSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYL 117
L + + +L R + VA + YL S IH DL N+LL + +
Sbjct: 98 LDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKI 152
Query: 118 SDFGIAKLLI-GEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKK 176
DFG+ + L +D + Q + APE + S D + FG+ L E FT +
Sbjct: 153 GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 212
Query: 177 PTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVE 236
+ NG L + + +E E C ++N+ + C
Sbjct: 213 EPWIGLNGSQIL------------------HKIDKEGERLPRPEDCPQDIYNVMVQCWAH 254
Query: 237 SPEQR 241
PE R
Sbjct: 255 KPEDR 259
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 101/248 (40%), Gaps = 32/248 (12%)
Query: 1 MEVAVKVFN---LQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHG 57
+ VAVK L A F E M S+ HRNLI++ K +V E P G
Sbjct: 41 VSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLG 99
Query: 58 SLEKYL--YSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVA 115
SL L + + +L R + VA + YL S IH DL N+LL +
Sbjct: 100 SLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLV 154
Query: 116 YLSDFGIAKLLI-GEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT- 173
+ DFG+ + L +D + Q + APE + S D + FG+ L E FT
Sbjct: 155 KIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTY 214
Query: 174 GKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMAC 233
G++P W+ ++ +++ + + +E E C ++N+ + C
Sbjct: 215 GQEP-----------------WIGLNGSQIL--HKIDKEGERLPRPEDCPQDIYNVMVQC 255
Query: 234 TVESPEQR 241
PE R
Sbjct: 256 WAHKPEDR 263
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Query: 30 RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 89
+H N++ ++ +C++ ++ EY +G L +L + +L+ I AS + L
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLL 167
Query: 90 HFG----------CSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTL 139
HF S IH D+ NVLL + VA + DFG+A+ ++ + + +
Sbjct: 168 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 227
Query: 140 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 173
+ +MAPE + + DV+S+GI+L E F+
Sbjct: 228 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 93/184 (50%), Gaps = 19/184 (10%)
Query: 2 EVAVKVFNLQCGRAFKSFDV------ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMP 55
+VAVK+ N Q +S DV E + +K RH ++IK+ S +V+EY+
Sbjct: 38 KVAVKILNRQ---KIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVS 94
Query: 56 HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVA 115
G L Y+ + ++ R + + SA++Y H V+H DLKP+NVLLD ++ A
Sbjct: 95 GGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNA 150
Query: 116 YLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG--DVYSFGIMLMETFT 173
++DFG++ ++ D +T + + Y APE GR+ D++S G++L
Sbjct: 151 KIADFGLSNMM--SDGEFLRT-SCGSPNYAAPEV-ISGRLYAGPEVDIWSCGVILYALLC 206
Query: 174 GKKP 177
G P
Sbjct: 207 GTLP 210
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 7/169 (4%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
E +M+ + + ++++I C E + LV+E G L KYL + + D + ++
Sbjct: 61 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 118
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL-IGEDQSMTQTQTL 139
V+ ++YL + +H DL NVLL A +SDFG++K L E+ QT
Sbjct: 119 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGK 175
Query: 140 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTYEFFNGEMT 187
+ + APE + S+ DV+SFG+++ E F+ G+KP E+T
Sbjct: 176 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 224
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 7/169 (4%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
E +M+ + + ++++I C E + LV+E G L KYL + + D + ++
Sbjct: 55 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 112
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL-IGEDQSMTQTQTL 139
V+ ++YL + +H DL NVLL A +SDFG++K L E+ QT
Sbjct: 113 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 169
Query: 140 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTYEFFNGEMT 187
+ + APE + S+ DV+SFG+++ E F+ G+KP E+T
Sbjct: 170 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 218
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 7/169 (4%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
E +M+ + + ++++I C E + LV+E G L KYL + + D + ++
Sbjct: 57 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 114
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL-IGEDQSMTQTQTL 139
V+ ++YL + +H DL NVLL A +SDFG++K L E+ QT
Sbjct: 115 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 171
Query: 140 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTYEFFNGEMT 187
+ + APE + S+ DV+SFG+++ E F+ G+KP E+T
Sbjct: 172 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 220
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 78/162 (48%), Gaps = 6/162 (3%)
Query: 25 MMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVAS 84
++K+++H L+ + S + VL+Y+ G L +L C L+ R ++AS
Sbjct: 92 LLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF-YAAEIAS 150
Query: 85 ALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGY 144
AL YLH S +++ DLKP+N+LLD L+DFG+ K I E S T T T Y
Sbjct: 151 ALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENI-EHNSTTST-FCGTPEY 205
Query: 145 MAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEM 186
+APE + D + G +L E G P Y EM
Sbjct: 206 LAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM 247
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 7/169 (4%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
E +M+ + + ++++I C E + LV+E G L KYL + + D + ++
Sbjct: 67 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 124
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL-IGEDQSMTQTQTL 139
V+ ++YL + +H DL NVLL A +SDFG++K L E+ QT
Sbjct: 125 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 181
Query: 140 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTYEFFNGEMT 187
+ + APE + S+ DV+SFG+++ E F+ G+KP E+T
Sbjct: 182 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 230
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 7/169 (4%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
E +M+ + + ++++I C E + LV+E G L KYL + + D + ++
Sbjct: 61 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 118
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL-IGEDQSMTQTQTL 139
V+ ++YL + +H DL NVLL A +SDFG++K L E+ QT
Sbjct: 119 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 175
Query: 140 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTYEFFNGEMT 187
+ + APE + S+ DV+SFG+++ E F+ G+KP E+T
Sbjct: 176 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 224
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 87/162 (53%), Gaps = 12/162 (7%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++M+ + H L+ + S +EE +V++ + G L +L + + +L + +
Sbjct: 65 ELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL-FICE 123
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLA- 140
+ AL+YL + +IH D+KPDN+LLD++ +++DF IA +L E TQ T+A
Sbjct: 124 LVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE----TQITTMAG 176
Query: 141 TIGYMAPEY--GREGR-VSTNGDVYSFGIMLMETFTGKKPTY 179
T YMAPE R+G S D +S G+ E G++P +
Sbjct: 177 TKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYH 218
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 7/169 (4%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
E +M+ + + ++++I C E + LV+E G L KYL + + D + ++
Sbjct: 77 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 134
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL-IGEDQSMTQTQTL 139
V+ ++YL + +H DL NVLL A +SDFG++K L E+ QT
Sbjct: 135 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 191
Query: 140 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTYEFFNGEMT 187
+ + APE + S+ DV+SFG+++ E F+ G+KP E+T
Sbjct: 192 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 240
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 7/169 (4%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
E +M+ + + ++++I C E + LV+E G L KYL + + D + ++
Sbjct: 77 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 134
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL-IGEDQSMTQTQTL 139
V+ ++YL + +H DL NVLL A +SDFG++K L E+ QT
Sbjct: 135 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 191
Query: 140 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTYEFFNGEMT 187
+ + APE + S+ DV+SFG+++ E F+ G+KP E+T
Sbjct: 192 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 240
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 7/169 (4%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
E +M+ + + ++++I C E + LV+E G L KYL + + D + ++
Sbjct: 75 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 132
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL-IGEDQSMTQTQTL 139
V+ ++YL + +H DL NVLL A +SDFG++K L E+ QT
Sbjct: 133 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 189
Query: 140 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTYEFFNGEMT 187
+ + APE + S+ DV+SFG+++ E F+ G+KP E+T
Sbjct: 190 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 238
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 3 VAVKVFNLQC-GRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
VA+K+ + G E E +K++RH+++ ++ +VLEY P G L
Sbjct: 38 VAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFD 97
Query: 62 YLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFG 121
Y+ S + + + R+ + + SA+ Y+H S H DLKP+N+L D+ L DFG
Sbjct: 98 YIISQDRLSEEETRV-VFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFG 153
Query: 122 IAKLLIGEDQSMTQTQTLATIGYMAPEYGR-EGRVSTNGDVYSFGIMLMETFTGKKP--- 177
+ G QT ++ Y APE + + + + DV+S GI+L G P
Sbjct: 154 LCAKPKGNKDYHLQT-CCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDD 212
Query: 178 --TYEFFNGEMTLKHWVNDWLPISTM 201
+ M K+ V WL S++
Sbjct: 213 DNVMALYKKIMRGKYDVPKWLSPSSI 238
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 7/169 (4%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
E +M+ + + ++++I C E + LV+E G L KYL + + D + ++
Sbjct: 419 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 476
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG-EDQSMTQTQTL 139
V+ ++YL + +H DL NVLL A +SDFG++K L E+ QT
Sbjct: 477 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 533
Query: 140 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTYEFFNGEMT 187
+ + APE + S+ DV+SFG+++ E F+ G+KP E+T
Sbjct: 534 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 582
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 78/162 (48%), Gaps = 27/162 (16%)
Query: 31 HRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 90
H ++I +I S + F LV + M G L YL + L + +IM + A+ +LH
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYL-TEKVALSEKETRSIMRSLLEAVSFLH 217
Query: 91 FGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIA-KLLIGEDQSMTQTQTLATIGYMAPE- 148
+ ++H DLKP+N+LLDDN+ LSDFG + L GE + T GY+APE
Sbjct: 218 ---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE----KLRELCGTPGYLAPEI 270
Query: 149 -----------YGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
YG+E D+++ G++L G P +
Sbjct: 271 LKCSMDETHPGYGKE------VDLWACGVILFTLLAGSPPFW 306
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 7/169 (4%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
E +M+ + + ++++I C E + LV+E G L KYL + + D + ++
Sbjct: 420 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVH 477
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG-EDQSMTQTQTL 139
V+ ++YL + +H DL NVLL A +SDFG++K L E+ QT
Sbjct: 478 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 534
Query: 140 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTYEFFNGEMT 187
+ + APE + S+ DV+SFG+++ E F+ G+KP E+T
Sbjct: 535 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 583
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 108/253 (42%), Gaps = 27/253 (10%)
Query: 1 MEVAVKVFNLQCGRAFK-SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
+ VAVK C K F E +MK++ H +++K+I EE +++E P+G L
Sbjct: 53 INVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIE-EEPTWIIMELYPYGEL 111
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
YL + L + + + + A+ YL S +H D+ N+L+ L D
Sbjct: 112 GHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGD 168
Query: 120 FGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPT 178
FG+++ + ED L I +M+PE R +T DV+ F + + E + GK+P
Sbjct: 169 FGLSRYIEDEDYYKASVTRLP-IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP- 226
Query: 179 YEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESP 238
FF W+ + I +E D L + D+ C ++ L C P
Sbjct: 227 --FF--------WLENKDVIGVLEKGDR--LPKPDL-------CPPVLYTLMTRCWDYDP 267
Query: 239 EQRINAKEIVTKL 251
R E+V L
Sbjct: 268 SDRPRFTELVCSL 280
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 91/184 (49%), Gaps = 19/184 (10%)
Query: 2 EVAVKVFNLQCGRAFKSFDV------ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMP 55
+VAVK+ N Q +S DV E + +K RH ++IK+ S +V+EY+
Sbjct: 43 KVAVKILNRQ---KIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVS 99
Query: 56 HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVA 115
G L Y+ N LD + + + S ++Y H V+H DLKP+NVLLD ++ A
Sbjct: 100 GGELFDYI-CKNGRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNA 155
Query: 116 YLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG--DVYSFGIMLMETFT 173
++DFG++ ++ D + + + Y APE GR+ D++S G++L
Sbjct: 156 KIADFGLSNMM--SDGEFLRX-SCGSPNYAAPEVI-SGRLYAGPEVDIWSSGVILYALLC 211
Query: 174 GKKP 177
G P
Sbjct: 212 GTLP 215
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 108/253 (42%), Gaps = 27/253 (10%)
Query: 1 MEVAVKVFNLQCGRAFK-SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
+ VAVK C K F E +MK++ H +++K+I EE +++E P+G L
Sbjct: 37 INVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIE-EEPTWIIMELYPYGEL 95
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
YL + L + + + + A+ YL S +H D+ N+L+ L D
Sbjct: 96 GHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGD 152
Query: 120 FGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPT 178
FG+++ + ED L I +M+PE R +T DV+ F + + E + GK+P
Sbjct: 153 FGLSRYIEDEDYYKASVTRLP-IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP- 210
Query: 179 YEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESP 238
FF W+ + I +E D L + D+ C ++ L C P
Sbjct: 211 --FF--------WLENKDVIGVLEKGDR--LPKPDL-------CPPVLYTLMTRCWDYDP 251
Query: 239 EQRINAKEIVTKL 251
R E+V L
Sbjct: 252 SDRPRFTELVCSL 264
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 108/253 (42%), Gaps = 27/253 (10%)
Query: 1 MEVAVKVFNLQCGRAFK-SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
+ VAVK C K F E +MK++ H +++K+I EE +++E P+G L
Sbjct: 41 INVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIE-EEPTWIIMELYPYGEL 99
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
YL + L + + + + A+ YL S +H D+ N+L+ L D
Sbjct: 100 GHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGD 156
Query: 120 FGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPT 178
FG+++ + ED L I +M+PE R +T DV+ F + + E + GK+P
Sbjct: 157 FGLSRYIEDEDYYKASVTRLP-IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP- 214
Query: 179 YEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESP 238
FF W+ + I +E D L + D+ C ++ L C P
Sbjct: 215 --FF--------WLENKDVIGVLEKGDR--LPKPDL-------CPPVLYTLMTRCWDYDP 255
Query: 239 EQRINAKEIVTKL 251
R E+V L
Sbjct: 256 SDRPRFTELVCSL 268
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 30 RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYL 89
+H N++ ++ +C++ ++ EY +G L +L + +L+ I S + L
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLL 167
Query: 90 HFG----------CSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTL 139
HF S IH D+ NVLL + VA + DFG+A+ ++ + + +
Sbjct: 168 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 227
Query: 140 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 173
+ +MAPE + + DV+S+GI+L E F+
Sbjct: 228 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 7/176 (3%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
EVA++ NLQ + E +M+ ++ N++ + S + +V+EY+ GSL
Sbjct: 47 EVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD 106
Query: 62 YLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFG 121
+ + C +D Q + + ALE+LH S VIH D+K DN+LL + L+DFG
Sbjct: 107 VV-TETC-MDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFG 161
Query: 122 IAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
+ E +++ + T +MAPE D++S GIM +E G+ P
Sbjct: 162 FCAQITPEQSK--RSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 119/259 (45%), Gaps = 26/259 (10%)
Query: 2 EVAVKVFNLQ-CGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS-- 58
+VA+K NL+ C + E + M H N++ +S ++ LV++ + GS
Sbjct: 37 KVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVL 96
Query: 59 -LEKYLYSS----NCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNL 113
+ K++ + + +LD I+ +V LEYLH IH D+K N+LL ++
Sbjct: 97 DIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDG 153
Query: 114 VAYLSDFGIAKLL-IGEDQSMTQTQT--LATIGYMAPEYGREGR-VSTNGDVYSFGIMLM 169
++DFG++ L G D + + + + T +MAPE + R D++SFGI +
Sbjct: 154 SVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAI 213
Query: 170 ETFTGKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNL 229
E TG P +++ ++ + ND P V D +L + F + +S
Sbjct: 214 ELATGAAPYHKYPPMKVLMLTLQND-PPSLETGVQDKEMLKKYGKSF---RKMISL---- 265
Query: 230 AMACTVESPEQRINAKEIV 248
C + PE+R A E++
Sbjct: 266 ---CLQKDPEKRPTAAELL 281
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 92/184 (50%), Gaps = 19/184 (10%)
Query: 2 EVAVKVFNLQCGRAFKSFDV------ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMP 55
+VAVK+ N Q +S DV E + +K RH ++IK+ S +V+EY+
Sbjct: 38 KVAVKILNRQ---KIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVS 94
Query: 56 HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVA 115
G L Y+ + ++ R + + SA++Y H V+H DLKP+NVLLD ++ A
Sbjct: 95 GGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNA 150
Query: 116 YLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG--DVYSFGIMLMETFT 173
++DFG++ ++ D + + + Y APE GR+ D++S G++L
Sbjct: 151 KIADFGLSNMM--SDGEFLR-DSCGSPNYAAPEV-ISGRLYAGPEVDIWSCGVILYALLC 206
Query: 174 GKKP 177
G P
Sbjct: 207 GTLP 210
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 114/265 (43%), Gaps = 39/265 (14%)
Query: 2 EVAVKVFNLQ--CGRAFKSFDVECEMMKSIRHRNLIKVISSCSNE--EFKALVLEYMPHG 57
++ VKV ++ R + F+ EC ++ H N++ V+ +C + L+ +MP+G
Sbjct: 35 DIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYG 94
Query: 58 SLEKYLY-SSNCILDIFQRLNIMIDVASALEYLHFGCSAPVI--HCDLKPDNVLLDDNLV 114
SL L+ +N ++D Q + +D+A + +LH P+I H L +V++D+++
Sbjct: 95 SLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH--TLEPLIPRHA-LNSRSVMIDEDMT 151
Query: 115 AYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTN---GDVYSFGIMLMET 171
A +S + S + ++APE ++ TN D++SF ++L E
Sbjct: 152 ARIS-------MADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWEL 204
Query: 172 FTGKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAM 231
T + P + N E+ +K ++ E + V L
Sbjct: 205 VTREVPFADLSNMEIGMK-------------------VALEGLRPTIPPGISPHVSKLMK 245
Query: 232 ACTVESPEQRINAKEIVTKLLKIRD 256
C E P +R IV L K++D
Sbjct: 246 ICMNEDPAKRPKFDMIVPILEKMQD 270
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 120/259 (46%), Gaps = 26/259 (10%)
Query: 2 EVAVKVFNLQ-CGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS-- 58
+VA+K NL+ C + E + M H N++ +S ++ LV++ + GS
Sbjct: 42 KVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVL 101
Query: 59 -LEKYLYSS----NCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNL 113
+ K++ + + +LD I+ +V LEYLH IH D+K N+LL ++
Sbjct: 102 DIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDG 158
Query: 114 VAYLSDFGIAKLL-IGEDQSMTQTQT--LATIGYMAPEYGREGR-VSTNGDVYSFGIMLM 169
++DFG++ L G D + + + + T +MAPE + R D++SFGI +
Sbjct: 159 SVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAI 218
Query: 170 ETFTGKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNL 229
E TG P +++ ++ + ND + T V D +L + F + +S
Sbjct: 219 ELATGAAPYHKYPPMKVLMLTLQNDPPSLET-GVQDKEMLKKYGKSF---RKMISL---- 270
Query: 230 AMACTVESPEQRINAKEIV 248
C + PE+R A E++
Sbjct: 271 ---CLQKDPEKRPTAAELL 286
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 100/246 (40%), Gaps = 38/246 (15%)
Query: 15 AFKSFDVECEMMKSIRHRNLIKVISSCSNEE--------FKA----LVLEYMPHGSLEKY 62
A K VE ++ + I+ I ++ C + FK +V+EY GS+
Sbjct: 58 AIKQVPVESDLQEIIKE---ISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDI 114
Query: 63 LYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGI 122
+ N L + I+ LEYLHF IH D+K N+LL+ A L+DFG+
Sbjct: 115 IRLRNKTLTEDEIATILQSTLKGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGV 171
Query: 123 AKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFF 182
A L D + + T +MAPE +E + D++S GI +E GK P
Sbjct: 172 AGQLT--DXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPP----- 224
Query: 183 NGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRI 242
D P+ + ++ N F E + C V+SPEQR
Sbjct: 225 ---------YADIHPMRAIFMIPTNPPPT----FRKPELWSDNFTDFVKQCLVKSPEQRA 271
Query: 243 NAKEIV 248
A +++
Sbjct: 272 TATQLL 277
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 85/176 (48%), Gaps = 7/176 (3%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
EVA++ NLQ + E +M+ ++ N++ + S + +V+EY+ GSL
Sbjct: 48 EVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD 107
Query: 62 YLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFG 121
+ + C +D Q + + ALE+LH S VIH D+K DN+LL + L+DFG
Sbjct: 108 VV-TETC-MDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFG 162
Query: 122 IAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
+ E ++ + T +MAPE D++S GIM +E G+ P
Sbjct: 163 FCAQITPEQSK--RSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 76/157 (48%), Gaps = 10/157 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E E+ +RH N++++ + L+LEY P G + K L D + + +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-QKLSKFDEQRTATYITE 121
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+A+AL Y H S VIH D+KP+N+LL ++DFG + S +T T
Sbjct: 122 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGT 174
Query: 142 IGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKP 177
+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 175 LDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 85/176 (48%), Gaps = 7/176 (3%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
EVA++ NLQ + E +M+ ++ N++ + S + +V+EY+ GSL
Sbjct: 47 EVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD 106
Query: 62 YLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFG 121
+ + C +D Q + + ALE+LH S VIH D+K DN+LL + L+DFG
Sbjct: 107 VV-TETC-MDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFG 161
Query: 122 IAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
+ E ++ + T +MAPE D++S GIM +E G+ P
Sbjct: 162 FCAQITPEQSK--RSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 86/176 (48%), Gaps = 7/176 (3%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
EVA++ NLQ + E +M+ ++ N++ + S + +V+EY+ GSL
Sbjct: 47 EVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD 106
Query: 62 YLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFG 121
+ + C +D Q + + ALE+LH S VIH D+K DN+LL + L+DFG
Sbjct: 107 VV-TETC-MDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFG 161
Query: 122 IAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
+ E QS T + T +MAPE D++S GIM +E G+ P
Sbjct: 162 FCAQITPE-QSKRST-MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 114/248 (45%), Gaps = 27/248 (10%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
+VAVK +L+ + + E +M+ H N++ + SS + +V+E++ G+L
Sbjct: 72 QVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTD 131
Query: 62 YLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFG 121
+ ++ ++ Q + + V AL YLH + VIH D+K D++LL + LSDFG
Sbjct: 132 IV--THTRMNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFG 186
Query: 122 IAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEF 181
+ E + + T +MAPE T D++S GIM++E G+ P +
Sbjct: 187 FCAQVSKE--VPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPP---Y 241
Query: 182 FNGEMTLKHWVNDWLPISTMEVVDANLLSQ-EDIHFVAKEQCVSFVFNLAMACTVESPEQ 240
FN P+ M + +L + +D+H V+ S + V P Q
Sbjct: 242 FNEP-----------PLQAMRRIRDSLPPRVKDLHKVS-----SVLRGFLDLMLVREPSQ 285
Query: 241 RINAKEIV 248
R A+E++
Sbjct: 286 RATAQELL 293
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 92/197 (46%), Gaps = 27/197 (13%)
Query: 1 MEVAVKVFNLQCGRAFK-SFDVECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGS 58
++VAVK+ + + + + E +MM + H N++ ++ +C+ L+ EY +G
Sbjct: 76 IQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGD 135
Query: 59 LEKYL-------------YSSNCILDIFQRLNIMI---------DVASALEYLHFGCSAP 96
L YL Y + L+ + LN++ VA +E+L F
Sbjct: 136 LLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KS 192
Query: 97 VIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVS 156
+H DL NVL+ V + DFG+A+ ++ + + + + +MAPE EG +
Sbjct: 193 CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYT 252
Query: 157 TNGDVYSFGIMLMETFT 173
DV+S+GI+L E F+
Sbjct: 253 IKSDVWSYGILLWEIFS 269
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 110/255 (43%), Gaps = 37/255 (14%)
Query: 1 MEVAVKVF--NLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKA------LVLE 52
++VAVK+ ++ + F E MK H ++ K++ K ++L
Sbjct: 52 VKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILP 111
Query: 53 YMPHGSLEKYLYSSNCILDIFQR-----LNIMIDVASALEYLHFGCSAPVIHCDLKPDNV 107
+M HG L +L +S + F + M+D+A +EYL S IH DL N
Sbjct: 112 FMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNC 168
Query: 108 LLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIM 167
+L +++ ++DFG+++ + D + + ++A E + + + DV++FG+
Sbjct: 169 MLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVT 228
Query: 168 LMETFT-GKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFV 226
+ E T G+ P N E + ++L + N L Q +C+ V
Sbjct: 229 MWEIMTRGQTPYAGIENAE------IYNYL-------IGGNRLKQ-------PPECMEEV 268
Query: 227 FNLAMACTVESPEQR 241
++L C P+QR
Sbjct: 269 YDLMYQCWSADPKQR 283
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 10/157 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 116
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+A+AL Y H S VIH D+KP+N+LL ++DFG + S +T+ T
Sbjct: 117 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTELCGT 169
Query: 142 IGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKP 177
+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 170 LDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 82/175 (46%), Gaps = 26/175 (14%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI------------ 69
E ++K + H ++IK+ +CS + L++EY +GSL +L S +
Sbjct: 76 EFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN 135
Query: 70 -----------LDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
L + ++ ++ ++YL ++H DL N+L+ + +S
Sbjct: 136 SSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKIS 192
Query: 119 DFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 173
DFG+++ + ED + ++Q + +MA E + +T DV+SFG++L E T
Sbjct: 193 DFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 82/175 (46%), Gaps = 26/175 (14%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI------------ 69
E ++K + H ++IK+ +CS + L++EY +GSL +L S +
Sbjct: 76 EFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN 135
Query: 70 -----------LDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
L + ++ ++ ++YL ++H DL N+L+ + +S
Sbjct: 136 SSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKIS 192
Query: 119 DFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 173
DFG+++ + ED + ++Q + +MA E + +T DV+SFG++L E T
Sbjct: 193 DFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 114/271 (42%), Gaps = 36/271 (13%)
Query: 1 MEVAVKVFNL--QCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKAL-----VLEY 53
++VAVK L R + F E MK H N+I+++ C + + +L +
Sbjct: 63 LKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPF 122
Query: 54 MPHGSLEKYLYSSNC-----ILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVL 108
M +G L YL S + + L M+D+A +EYL + +H DL N +
Sbjct: 123 MKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYL---SNRNFLHRDLAARNCM 179
Query: 109 LDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML 168
L D++ ++DFG++K + D + ++A E + ++ DV++FG+ +
Sbjct: 180 LRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTM 239
Query: 169 METFT-GKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVF 227
E T G P N EM D+L + + L Q E C+ ++
Sbjct: 240 WEIATRGMTPYPGVQNHEMY------DYL-------LHGHRLKQ-------PEDCLDELY 279
Query: 228 NLAMACTVESPEQRINAKEIVTKLLKIRDSL 258
+ +C P R + +L K+ +SL
Sbjct: 280 EIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 75/157 (47%), Gaps = 10/157 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E E+ + H N++++ + + L+LEY P G L K L S C D + IM +
Sbjct: 73 EIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKS-CTFDEQRTATIMEE 131
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+A AL Y H VIH D+KP+N+LL ++DFG + S+ + T
Sbjct: 132 LADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFGWSV----HAPSLRRKTMCGT 184
Query: 142 IGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKP 177
+ Y+ PE EGR+ D++ G++ E G P
Sbjct: 185 LDYLPPEMI-EGRMHNEKVDLWCIGVLCYELLVGNPP 220
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 6/157 (3%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
+E +++ + H ++K+ + E L+L+++ G L L S + +
Sbjct: 76 MERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLA 134
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLA 140
++A AL++LH S +I+ DLKP+N+LLD+ L+DFG++K I D
Sbjct: 135 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI--DHEKKAYSFCG 189
Query: 141 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
T+ YMAPE + + D +SFG+++ E TG P
Sbjct: 190 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 6/157 (3%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
+E +++ + H ++K+ + E L+L+++ G L L S + +
Sbjct: 75 MERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLA 133
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLA 140
++A AL++LH S +I+ DLKP+N+LLD+ L+DFG++K I D
Sbjct: 134 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI--DHEKKAYSFCG 188
Query: 141 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
T+ YMAPE + + D +SFG+++ E TG P
Sbjct: 189 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 10/157 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 55 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 113
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+A+AL Y H S VIH D+KP+N+LL ++DFG + S +T T
Sbjct: 114 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGT 166
Query: 142 IGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKP 177
+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 167 LDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 202
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 82/175 (46%), Gaps = 26/175 (14%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCI------------ 69
E ++K + H ++IK+ +CS + L++EY +GSL +L S +
Sbjct: 76 EFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN 135
Query: 70 -----------LDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
L + ++ ++ ++YL ++H DL N+L+ + +S
Sbjct: 136 SSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKIS 192
Query: 119 DFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 173
DFG+++ + ED + ++Q + +MA E + +T DV+SFG++L E T
Sbjct: 193 DFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 10/157 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSRFDEQRTATYITE 120
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+A+AL Y H S VIH D+KP+N+LL N ++DFG + S +T T
Sbjct: 121 LANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSV----HAPSSRRTTLCGT 173
Query: 142 IGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKP 177
+ Y+ PE EGR+ D++S G++ E G P
Sbjct: 174 LDYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 10/157 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 116
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+A+AL Y H S VIH D+KP+N+LL ++DFG + S +T T
Sbjct: 117 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTDLCGT 169
Query: 142 IGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKP 177
+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 170 LDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 6/157 (3%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
+E +++ + H ++K+ + E L+L+++ G L L S + +
Sbjct: 75 MERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLA 133
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLA 140
++A AL++LH S +I+ DLKP+N+LLD+ L+DFG++K I D
Sbjct: 134 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI--DHEKKAYSFCG 188
Query: 141 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
T+ YMAPE + + D +SFG+++ E TG P
Sbjct: 189 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 10/157 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 57 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 115
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+A+AL Y H S VIH D+KP+N+LL ++DFG + S +T T
Sbjct: 116 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGT 168
Query: 142 IGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKP 177
+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 169 LDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 204
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 10/157 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E E+ +RH N++++ + L+LEY P G++ + L + D + + +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITE 116
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+A+AL Y H S VIH D+KP+N+LL ++DFG + S +T T
Sbjct: 117 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTDLCGT 169
Query: 142 IGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKP 177
+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 170 LDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 10/157 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 119
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+A+AL Y H S VIH D+KP+N+LL ++DFG + S +T T
Sbjct: 120 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGT 172
Query: 142 IGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKP 177
+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 173 LDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 10/157 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 116
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+A+AL Y H S VIH D+KP+N+LL ++DFG + S +T T
Sbjct: 117 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTXLCGT 169
Query: 142 IGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKP 177
+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 170 LDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 10/157 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 117
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+A+AL Y H S VIH D+KP+N+LL ++DFG + S +T T
Sbjct: 118 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTDLCGT 170
Query: 142 IGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKP 177
+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 171 LDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 10/157 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 120
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+A+AL Y H S VIH D+KP+N+LL ++DFG + S +T T
Sbjct: 121 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGT 173
Query: 142 IGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKP 177
+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 174 LDYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 209
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 10/157 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 121
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+A+AL Y H S VIH D+KP+N+LL ++DFG + S +T T
Sbjct: 122 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTDLCGT 174
Query: 142 IGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKP 177
+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 175 LDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 76/156 (48%), Gaps = 9/156 (5%)
Query: 25 MMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVAS 84
M+ + H +I++ + + + ++++Y+ G L L S + + +V
Sbjct: 59 MLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF-YAAEVCL 117
Query: 85 ALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGY 144
ALEYLH S +I+ DLKP+N+LLD N ++DFG AK + + T Y
Sbjct: 118 ALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLC-----GTPDY 169
Query: 145 MAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYE 180
+APE + + D +SFGI++ E G P Y+
Sbjct: 170 IAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYD 205
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 29/193 (15%)
Query: 2 EVAVKVFNLQ--CGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
E A K+ N + R + + E + + ++H N++++ S S E F LV + + G L
Sbjct: 58 EYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL 117
Query: 60 -----EKYLYS----SNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLD 110
+ YS S+CI I + +N ++H ++H DLKP+N+LL
Sbjct: 118 FEDIVAREYYSEADASHCIHQILESVN----------HIH---QHDIVHRDLKPENLLLA 164
Query: 111 D---NLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIM 167
L+DFG+A + GE Q+ T GY++PE R+ D+++ G++
Sbjct: 165 SKCKGAAVKLADFGLAIEVQGEQQAWFGFA--GTPGYLSPEVLRKDPYGKPVDIWACGVI 222
Query: 168 LMETFTGKKPTYE 180
L G P ++
Sbjct: 223 LYILLVGYPPFWD 235
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 10/157 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 121
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+A+AL Y H S VIH D+KP+N+LL ++DFG + S +T T
Sbjct: 122 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGT 174
Query: 142 IGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKP 177
+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 175 LDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 10/157 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 116
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+A+AL Y H S VIH D+KP+N+LL ++DFG + S +T T
Sbjct: 117 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGT 169
Query: 142 IGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKP 177
+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 170 LDYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 10/157 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E E+ +RH N++++ + L+LEY P G + K L D + + +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-QKLSKFDEQRTATYITE 121
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+A+AL Y H S VIH D+KP+N+LL ++DFG + S + T
Sbjct: 122 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRXXLXGT 174
Query: 142 IGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKP 177
+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 175 LDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 10/157 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E E+ +RH N++++ + L+LEY P G++ + L + D + + +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITE 119
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+A+AL Y H S VIH D+KP+N+LL ++DFG + S +T T
Sbjct: 120 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGT 172
Query: 142 IGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKP 177
+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 173 LDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 8/158 (5%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
+E +++ + H ++K+ + E L+L+++ G L L S + +
Sbjct: 79 MERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLA 137
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLA 140
++A L++LH S +I+ DLKP+N+LLD+ L+DFG++K I D
Sbjct: 138 ELALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAI--DHEKKAYSFCG 192
Query: 141 TIGYMAPE-YGREGRVSTNGDVYSFGIMLMETFTGKKP 177
T+ YMAPE R+G S + D +S+G+++ E TG P
Sbjct: 193 TVEYMAPEVVNRQGH-SHSADWWSYGVLMFEMLTGSLP 229
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 86/176 (48%), Gaps = 7/176 (3%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
EVA++ NLQ + E +M+ ++ N++ + S + +V+EY+ GSL
Sbjct: 48 EVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD 107
Query: 62 YLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFG 121
+ + C +D Q + + ALE+LH S VIH ++K DN+LL + L+DFG
Sbjct: 108 VV-TETC-MDEGQIAAVCRECLQALEFLH---SNQVIHRNIKSDNILLGMDGSVKLTDFG 162
Query: 122 IAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
+ E QS T + T +MAPE D++S GIM +E G+ P
Sbjct: 163 FCAQITPE-QSKRST-MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 10/157 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 75 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 133
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+A+AL Y H S VIH D+KP+N+LL ++DFG + S +T T
Sbjct: 134 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGT 186
Query: 142 IGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKP 177
+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 187 LDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 222
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 10/157 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 121
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+A+AL Y H S VIH D+KP+N+LL ++DFG + S +T T
Sbjct: 122 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGT 174
Query: 142 IGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKP 177
+ Y+ PE EGR D++S G++ E GK P
Sbjct: 175 LDYLPPEXI-EGRXHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 11/187 (5%)
Query: 5 VKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLE---K 61
V++F+L +A E +++K + H N+IK +S + +VLE G L K
Sbjct: 65 VQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIK 124
Query: 62 YLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFG 121
+ ++ + + SALE++H S V+H D+KP NV + V L D G
Sbjct: 125 HFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLG 181
Query: 122 IAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEF 181
+ + ++ + T YM+PE E + D++S G +L E + P F
Sbjct: 182 LGRFF--SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSP---F 236
Query: 182 FNGEMTL 188
+ +M L
Sbjct: 237 YGDKMNL 243
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 10/157 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 117
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+A+AL Y H S VIH D+KP+N+LL ++DFG + S +T T
Sbjct: 118 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS----CHAPSSRRTTLSGT 170
Query: 142 IGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKP 177
+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 171 LDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 80/162 (49%), Gaps = 21/162 (12%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKY-LYSSNCILDIFQRLNIMI 80
E +++K +RH NL+ ++ C ++ LV E++ H L+ L+ + + Q+ +
Sbjct: 74 EIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKY--LF 131
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLA 140
+ + + + H S +IH D+KP+N+L+ + V L DFG A+ L + +A
Sbjct: 132 QIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE--VYDDEVA 186
Query: 141 TIGYMAPE-------YGREGRVSTNGDVYSFGIMLMETFTGK 175
T Y APE YG+ DV++ G ++ E F G+
Sbjct: 187 TRWYRAPELLVGDVKYGKA------VDVWAIGCLVTEMFMGE 222
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 10/157 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E E+ +RH N++++ + L+LEY P G++ + L + D + + +
Sbjct: 84 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITE 142
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+A+AL Y H S VIH D+KP+N+LL ++DFG + S +T T
Sbjct: 143 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGT 195
Query: 142 IGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKP 177
+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 196 LDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 93/188 (49%), Gaps = 26/188 (13%)
Query: 6 KVFNLQCGR---AFK--SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL- 59
K+F L+C + AF+ S + E ++K I+H N++ + + LV++ + G L
Sbjct: 35 KLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELF 94
Query: 60 ----EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL---DDN 112
E+ +Y+ + Q+ V SA++YLH ++H DLKP+N+L ++N
Sbjct: 95 DRILERGVYTEKDASLVIQQ------VLSAVKYLH---ENGIVHRDLKPENLLYLTPEEN 145
Query: 113 LVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETF 172
++DFG++K+ +Q+ + T GY+APE + S D +S G++
Sbjct: 146 SKIMITDFGLSKM----EQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILL 201
Query: 173 TGKKPTYE 180
G P YE
Sbjct: 202 CGYPPFYE 209
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 93/202 (46%), Gaps = 39/202 (19%)
Query: 2 EVAVKVFNLQCGRAFKSFDV---------ECEMMKSIR-HRNLIKVISSCSNEEFKALVL 51
E AVK+ ++ G +F + +V E ++++ + H N+I++ + F LV
Sbjct: 31 EYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVF 90
Query: 52 EYMPHGSLEKYLYSSNCILDIFQR--LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
+ M G L YL + + R + +++V AL L+ ++H DLKP+N+LL
Sbjct: 91 DLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN------IVHRDLKPENILL 144
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPE------------YGREGRVST 157
DD++ L+DFG + L D + T Y+APE YG+E
Sbjct: 145 DDDMNIKLTDFGFSCQL---DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKE----- 196
Query: 158 NGDVYSFGIMLMETFTGKKPTY 179
D++S G+++ G P +
Sbjct: 197 -VDMWSTGVIMYTLLAGSPPFW 217
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 93/202 (46%), Gaps = 39/202 (19%)
Query: 2 EVAVKVFNLQCGRAFKSFDV---------ECEMMKSIR-HRNLIKVISSCSNEEFKALVL 51
E AVK+ ++ G +F + +V E ++++ + H N+I++ + F LV
Sbjct: 44 EYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVF 103
Query: 52 EYMPHGSLEKYLYSSNCILDIFQR--LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
+ M G L YL + + R + +++V AL L+ ++H DLKP+N+LL
Sbjct: 104 DLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN------IVHRDLKPENILL 157
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPE------------YGREGRVST 157
DD++ L+DFG + L D + T Y+APE YG+E
Sbjct: 158 DDDMNIKLTDFGFSCQL---DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKE----- 209
Query: 158 NGDVYSFGIMLMETFTGKKPTY 179
D++S G+++ G P +
Sbjct: 210 -VDMWSTGVIMYTLLAGSPPFW 230
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 10/157 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 116
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+A+AL Y H S VIH D+KP+N+LL ++DFG + S + T
Sbjct: 117 LANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRAALCGT 169
Query: 142 IGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKP 177
+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 170 LDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 88/180 (48%), Gaps = 7/180 (3%)
Query: 1 MEVAVKVFNLQCGRA-FKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
++VA+KV +A + E ++M + + ++++I C E LV+E G L
Sbjct: 38 IDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEAL-MLVMEMAGGGPL 96
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
K+L + + ++ V+ ++YL +H DL NVLL + A +SD
Sbjct: 97 HKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISD 153
Query: 120 FGIAKLLIGEDQSMT-QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
FG++K L +D T ++ + + APE + S+ DV+S+G+ + E + G+KP
Sbjct: 154 FGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 213
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 30/194 (15%)
Query: 1 MEVAVKVFNLQ--CGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
+E A K+ N + R F+ + E + + ++H N++++ S E F LV + + G
Sbjct: 32 LEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGE 91
Query: 59 L-----EKYLYS----SNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L + YS S+CI I + ++ Y H S ++H +LKP+N+LL
Sbjct: 92 LFEDIVAREFYSEADASHCIQQILE----------SIAYCH---SNGIVHRNLKPENLLL 138
Query: 110 DD---NLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGI 166
L+DFG+A I + S T GY++PE ++ S D+++ G+
Sbjct: 139 ASKAKGAAVKLADFGLA---IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGV 195
Query: 167 MLMETFTGKKPTYE 180
+L G P ++
Sbjct: 196 ILYILLVGYPPFWD 209
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 30/194 (15%)
Query: 1 MEVAVKVFNLQ--CGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
+E A K+ N + R F+ + E + + ++H N++++ S E F LV + + G
Sbjct: 31 LEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGE 90
Query: 59 L-----EKYLYS----SNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L + YS S+CI I + ++ Y H S ++H +LKP+N+LL
Sbjct: 91 LFEDIVAREFYSEADASHCIQQILE----------SIAYCH---SNGIVHRNLKPENLLL 137
Query: 110 DD---NLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGI 166
L+DFG+A I + S T GY++PE ++ S D+++ G+
Sbjct: 138 ASKAKGAAVKLADFGLA---IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGV 194
Query: 167 MLMETFTGKKPTYE 180
+L G P ++
Sbjct: 195 ILYILLVGYPPFWD 208
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 30/194 (15%)
Query: 1 MEVAVKVFNLQ--CGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
+E A K+ N + R F+ + E + + ++H N++++ S E F LV + + G
Sbjct: 32 LEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGE 91
Query: 59 L-----EKYLYS----SNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L + YS S+CI I + ++ Y H S ++H +LKP+N+LL
Sbjct: 92 LFEDIVAREFYSEADASHCIQQILE----------SIAYCH---SNGIVHRNLKPENLLL 138
Query: 110 DD---NLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGI 166
L+DFG+A I + S T GY++PE ++ S D+++ G+
Sbjct: 139 ASKAKGAAVKLADFGLA---IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGV 195
Query: 167 MLMETFTGKKPTYE 180
+L G P ++
Sbjct: 196 ILYILLVGYPPFWD 209
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 30/194 (15%)
Query: 1 MEVAVKVFNLQ--CGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
+E A K+ N + R F+ + E + + ++H N++++ S E F LV + + G
Sbjct: 55 LEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGE 114
Query: 59 L-----EKYLYS----SNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L + YS S+CI I + ++ Y H S ++H +LKP+N+LL
Sbjct: 115 LFEDIVAREFYSEADASHCIQQILE----------SIAYCH---SNGIVHRNLKPENLLL 161
Query: 110 DD---NLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGI 166
L+DFG+A I + S T GY++PE ++ S D+++ G+
Sbjct: 162 ASKAKGAAVKLADFGLA---IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGV 218
Query: 167 MLMETFTGKKPTYE 180
+L G P ++
Sbjct: 219 ILYILLVGYPPFWD 232
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 10/157 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 116
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+A+AL Y H S VIH D+KP+N+LL ++DFG + S + T
Sbjct: 117 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRAALCGT 169
Query: 142 IGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKP 177
+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 170 LDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 81/157 (51%), Gaps = 7/157 (4%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS-SNCILDIFQRLNIMI 80
E ++++ + R ++ + + ++ LVL M G L+ ++Y + +
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLA 140
++ LE LH +++ DLKP+N+LLDD+ +SD G+A + + E Q++ +
Sbjct: 294 EICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLA-VHVPEGQTIKGR--VG 347
Query: 141 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
T+GYMAPE + R + + D ++ G +L E G+ P
Sbjct: 348 TVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 10/157 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 119
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+A+AL Y H S VIH D+KP+N+LL +++FG + S +T T
Sbjct: 120 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSV----HAPSSRRTTLCGT 172
Query: 142 IGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKP 177
+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 173 LDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 39/202 (19%)
Query: 2 EVAVKVFNLQCGRAFKSFDV---------ECEMMKSIR-HRNLIKVISSCSNEEFKALVL 51
E AVK+ ++ G +F + +V E ++++ + H N+I++ + F LV
Sbjct: 44 EYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVF 103
Query: 52 EYMPHGSLEKYLYSSNCILDIFQR--LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
+ M G L YL + + R + +++V AL L+ ++H DLKP+N+LL
Sbjct: 104 DLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN------IVHRDLKPENILL 157
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPE------------YGREGRVST 157
DD++ L+DFG + L D T Y+APE YG+E
Sbjct: 158 DDDMNIKLTDFGFSCQL---DPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKE----- 209
Query: 158 NGDVYSFGIMLMETFTGKKPTY 179
D++S G+++ G P +
Sbjct: 210 -VDMWSTGVIMYTLLAGSPPFW 230
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 10/157 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 118
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+A+AL Y H S VIH D+KP+N+LL +++FG + S +T T
Sbjct: 119 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSV----HAPSSRRTTLCGT 171
Query: 142 IGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKP 177
+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 172 LDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 10/157 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 119
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+A+AL Y H S VIH D+KP+N+LL ++DFG + S + T
Sbjct: 120 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRXXLCGT 172
Query: 142 IGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKP 177
+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 173 LDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Query: 49 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVL 108
+++EY+ GS L + D FQ ++ ++ L+YLH S IH D+K NVL
Sbjct: 98 IIMEYLGGGSALDLLRAGP--FDEFQIATMLKEILKGLDYLH---SEKKIHRDIKAANVL 152
Query: 109 LDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML 168
L + L+DFG+A L D + + + T +MAPE ++ + D++S GI
Sbjct: 153 LSEQGDVKLADFGVAGQLT--DTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITA 210
Query: 169 METFTGKKP 177
+E G+ P
Sbjct: 211 IELAKGEPP 219
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 10/157 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 116
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+A+AL Y H S VIH D+KP+N+LL ++DFG + S + T
Sbjct: 117 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRXXLCGT 169
Query: 142 IGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKP 177
+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 170 LDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 10/157 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 119
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+A+AL Y H S VIH D+KP+N+LL ++DFG + S + T
Sbjct: 120 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRAALCGT 172
Query: 142 IGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKP 177
+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 173 LDYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 81/157 (51%), Gaps = 7/157 (4%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYS-SNCILDIFQRLNIMI 80
E ++++ + R ++ + + ++ LVL M G L+ ++Y + +
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLA 140
++ LE LH +++ DLKP+N+LLDD+ +SD G+A + + E Q++ +
Sbjct: 294 EICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLA-VHVPEGQTIKGR--VG 347
Query: 141 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
T+GYMAPE + R + + D ++ G +L E G+ P
Sbjct: 348 TVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 10/157 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 118
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+A+AL Y H S VIH D+KP+N+LL ++DFG + S + T
Sbjct: 119 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRXXLCGT 171
Query: 142 IGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKP 177
+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 172 LDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 10/181 (5%)
Query: 1 MEVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFK-ALVLEYMPHGSL 59
M+V K +Q + + E ++++ IR + + E K L+L+Y+ G L
Sbjct: 87 MKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGEL 146
Query: 60 EKYLYSSNCILDIFQRLNIMI-DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
+L + + I + ++ ALE+LH +I+ D+K +N+LLD N L+
Sbjct: 147 FTHLSQRERFTE--HEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLT 201
Query: 119 DFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG--DVYSFGIMLMETFTGKK 176
DFG++K + D++ TI YMAP+ R G + D +S G+++ E TG
Sbjct: 202 DFGLSKEFVA-DETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGAS 260
Query: 177 P 177
P
Sbjct: 261 P 261
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 10/157 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSRFDEQRTATYITE 120
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+A+AL Y H S VIH D+KP+N+LL N ++DFG + S + T
Sbjct: 121 LANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSV----HAPSSRRDTLCGT 173
Query: 142 IGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKP 177
+ Y+ PE EGR+ D++S G++ E G P
Sbjct: 174 LDYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 7/133 (5%)
Query: 49 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVL 108
+++EY+ GS L LD Q I+ ++ L+YLH S IH D+K NVL
Sbjct: 82 IIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH---SEKKIHRDIKAANVL 136
Query: 109 LDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML 168
L ++ L+DFG+A L D + + + T +MAPE ++ + D++S GI
Sbjct: 137 LSEHGEVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITA 194
Query: 169 METFTGKKPTYEF 181
+E G+ P E
Sbjct: 195 IELARGEPPHSEL 207
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 10/157 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E E+ +RH N++++ + L+LEY P G++ + L + D + + +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITE 119
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+A+AL Y H S VIH D+KP+N+LL ++DFG + S + T
Sbjct: 120 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRDDLCGT 172
Query: 142 IGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKP 177
+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 173 LDYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 7/133 (5%)
Query: 49 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVL 108
+++EY+ GS L LD Q I+ ++ L+YLH S IH D+K NVL
Sbjct: 82 IIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH---SEKKIHRDIKAANVL 136
Query: 109 LDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML 168
L ++ L+DFG+A L D + + + T +MAPE ++ + D++S GI
Sbjct: 137 LSEHGEVKLADFGVAGQLT--DTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITA 194
Query: 169 METFTGKKPTYEF 181
+E G+ P E
Sbjct: 195 IELARGEPPHSEL 207
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 93/187 (49%), Gaps = 24/187 (12%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISS---CSNEEFK-ALVLEYMPHGS 58
VAVK+F LQ ++++S + E ++H NL++ I++ SN E + L+ + GS
Sbjct: 41 VAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGS 99
Query: 59 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHF--------GCSAPVIHCDLKPDNVLLD 110
L YL + I+ + ++ ++ L YLH G + H D K NVLL
Sbjct: 100 LTDYLKGN--IITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLK 157
Query: 111 DNLVAYLSDFGIA-KLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG------DVYS 163
+L A L+DFG+A + G+ T Q + T YMAPE EG ++ D+Y+
Sbjct: 158 SDLTAVLADFGLAVRFEPGKPPGDTHGQ-VGTRRYMAPEV-LEGAINFQRDAFLRIDMYA 215
Query: 164 FGIMLME 170
G++L E
Sbjct: 216 MGLVLWE 222
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 7/133 (5%)
Query: 49 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVL 108
+++EY+ GS L LD Q I+ ++ L+YLH S IH D+K NVL
Sbjct: 97 IIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH---SEKKIHRDIKAANVL 151
Query: 109 LDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML 168
L ++ L+DFG+A L D + + + T +MAPE ++ + D++S GI
Sbjct: 152 LSEHGEVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITA 209
Query: 169 METFTGKKPTYEF 181
+E G+ P E
Sbjct: 210 IELARGEPPHSEL 222
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++++ + H N+I ++ + ++ +LV ++M LE + ++ +L M+
Sbjct: 62 EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLM 120
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
LEYLH ++H DLKP+N+LLD+N V L+DFG+AK +++ + T
Sbjct: 121 TLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAY--XHQVVT 175
Query: 142 IGYMAPEYGREGRVSTNG-DVYSFGIMLME 170
Y APE R+ G D+++ G +L E
Sbjct: 176 RWYRAPELLFGARMYGVGVDMWAVGCILAE 205
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 10/157 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 117
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+A+AL Y H S VIH D+KP+N+LL ++DFG + S + T
Sbjct: 118 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRDTLCGT 170
Query: 142 IGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKP 177
+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 171 LDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 88/193 (45%), Gaps = 29/193 (15%)
Query: 2 EVAVKVFNLQ--CGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
E A K+ N + R + + E + + ++H N++++ S S E F LV + + G L
Sbjct: 31 EYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL 90
Query: 60 -----EKYLYS----SNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL- 109
+ YS S+CI I + +N + H ++H DLKP+N+LL
Sbjct: 91 FEDIVAREYYSEADASHCIQQILESVN----------HCHLNG---IVHRDLKPENLLLA 137
Query: 110 --DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIM 167
L+DFG+A + G+ Q+ T GY++PE R+ D+++ G++
Sbjct: 138 SKSKGAAVKLADFGLAIEVQGDQQAWFGFA--GTPGYLSPEVLRKDPYGKPVDMWACGVI 195
Query: 168 LMETFTGKKPTYE 180
L G P ++
Sbjct: 196 LYILLVGYPPFWD 208
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 88/193 (45%), Gaps = 29/193 (15%)
Query: 2 EVAVKVFNLQ--CGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
E A K+ N + R + + E + + ++H N++++ S S E F LV + + G L
Sbjct: 31 EYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL 90
Query: 60 -----EKYLYS----SNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL- 109
+ YS S+CI I + +N + H ++H DLKP+N+LL
Sbjct: 91 FEDIVAREYYSEADASHCIQQILESVN----------HCHLNG---IVHRDLKPENLLLA 137
Query: 110 --DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIM 167
L+DFG+A + G+ Q+ T GY++PE R+ D+++ G++
Sbjct: 138 SKSKGAAVKLADFGLAIEVQGDQQAWFGFA--GTPGYLSPEVLRKDPYGKPVDMWACGVI 195
Query: 168 LMETFTGKKPTYE 180
L G P ++
Sbjct: 196 LYILLVGYPPFWD 208
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 90/178 (50%), Gaps = 7/178 (3%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
+VAVK+ +L+ + + E +M+ +H N++++ S E +++E++ G+L
Sbjct: 72 QVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTD 131
Query: 62 YLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFG 121
+ S L+ Q + V AL YLH + VIH D+K D++LL + LSDFG
Sbjct: 132 IV--SQVRLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDGRVKLSDFG 186
Query: 122 IAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
I +D + + T +MAPE +T D++S GIM++E G+ P +
Sbjct: 187 FCAQ-ISKDVP-KRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYF 242
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 107/265 (40%), Gaps = 40/265 (15%)
Query: 1 MEVAVKVFNLQCGRAFK-SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
++VAVK C + F +E ++ + H+N+++ I + ++LE M G L
Sbjct: 62 LQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDL 121
Query: 60 EKYLY------SSNCILDIFQRLNIMIDVASALEYL---HFGCSAPVIHCDLKPDNVLL- 109
+ +L S L + L++ D+A +YL HF IH D+ N LL
Sbjct: 122 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAARNCLLT 175
Query: 110 --DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIM 167
VA + DFG+A+ + + + +M PE EG ++ D +SFG++
Sbjct: 176 CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 235
Query: 168 LMETFT-GKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFV 226
L E F+ G P N E+ +E V + + C V
Sbjct: 236 LWEIFSLGYMPYPSKSNQEV--------------LEFVTSGG------RMDPPKNCPGPV 275
Query: 227 FNLAMACTVESPEQRINAKEIVTKL 251
+ + C PE R N I+ ++
Sbjct: 276 YRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 7/133 (5%)
Query: 49 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVL 108
+++EY+ GS L LD Q I+ ++ L+YLH S IH D+K NVL
Sbjct: 102 IIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH---SEKKIHRDIKAANVL 156
Query: 109 LDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML 168
L ++ L+DFG+A L D + + + T +MAPE ++ + D++S GI
Sbjct: 157 LSEHGEVKLADFGVAGQLT--DTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITA 214
Query: 169 METFTGKKPTYEF 181
+E G+ P E
Sbjct: 215 IELARGEPPHSEL 227
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 90/194 (46%), Gaps = 38/194 (19%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSI--RHRNLIKVISSCSNEEFKA----LVLEYMPH 56
VAVK+F+ R KS+ E E+ ++ RH N++ I+S + L+ Y
Sbjct: 63 VAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEM 119
Query: 57 GSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH---FGCSA-PVI-HCDLKPDNVLLDD 111
GSL YL + LD L I++ +AS L +LH FG P I H DLK N+L+
Sbjct: 120 GSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKK 177
Query: 112 NLVAYLSDFGIAKLLIGEDQSMTQ-----TQTLATIGYMAPE----------YGREGRVS 156
N ++D G+A + QS Q + T YMAPE + RV
Sbjct: 178 NGQCCIADLGLA---VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRV- 233
Query: 157 TNGDVYSFGIMLME 170
D+++FG++L E
Sbjct: 234 ---DIWAFGLVLWE 244
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 107/265 (40%), Gaps = 40/265 (15%)
Query: 1 MEVAVKVFNLQCGRAFK-SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
++VAVK C + F +E ++ + H+N+++ I + ++LE M G L
Sbjct: 76 LQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDL 135
Query: 60 EKYLY------SSNCILDIFQRLNIMIDVASALEYL---HFGCSAPVIHCDLKPDNVLL- 109
+ +L S L + L++ D+A +YL HF IH D+ N LL
Sbjct: 136 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAARNCLLT 189
Query: 110 --DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIM 167
VA + DFG+A+ + + + +M PE EG ++ D +SFG++
Sbjct: 190 CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 249
Query: 168 LMETFT-GKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFV 226
L E F+ G P N E+ +E V + + C V
Sbjct: 250 LWEIFSLGYMPYPSKSNQEV--------------LEFVTSGG------RMDPPKNCPGPV 289
Query: 227 FNLAMACTVESPEQRINAKEIVTKL 251
+ + C PE R N I+ ++
Sbjct: 290 YRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 90/194 (46%), Gaps = 38/194 (19%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSI--RHRNLIKVISSCSNEEFKA----LVLEYMPH 56
VAVK+F+ R KS+ E E+ ++ RH N++ I+S + L+ Y
Sbjct: 34 VAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEM 90
Query: 57 GSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH---FGCSA-PVI-HCDLKPDNVLLDD 111
GSL YL + LD L I++ +AS L +LH FG P I H DLK N+L+
Sbjct: 91 GSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKK 148
Query: 112 NLVAYLSDFGIAKLLIGEDQSMTQ-----TQTLATIGYMAPE----------YGREGRVS 156
N ++D G+A + QS Q + T YMAPE + RV
Sbjct: 149 NGQCCIADLGLA---VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRV- 204
Query: 157 TNGDVYSFGIMLME 170
D+++FG++L E
Sbjct: 205 ---DIWAFGLVLWE 215
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 90/194 (46%), Gaps = 38/194 (19%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSI--RHRNLIKVISSCSNEEFKA----LVLEYMPH 56
VAVK+F+ R KS+ E E+ ++ RH N++ I+S + L+ Y
Sbjct: 34 VAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEM 90
Query: 57 GSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH---FGCSA-PVI-HCDLKPDNVLLDD 111
GSL YL + LD L I++ +AS L +LH FG P I H DLK N+L+
Sbjct: 91 GSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKK 148
Query: 112 NLVAYLSDFGIAKLLIGEDQSMTQ-----TQTLATIGYMAPE----------YGREGRVS 156
N ++D G+A + QS Q + T YMAPE + RV
Sbjct: 149 NGQCCIADLGLA---VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRV- 204
Query: 157 TNGDVYSFGIMLME 170
D+++FG++L E
Sbjct: 205 ---DIWAFGLVLWE 215
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 88/185 (47%), Gaps = 16/185 (8%)
Query: 1 MEVAVKVFNLQCGR-AFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
+E +K N + + + E E++KS+ H N+IK+ + +V+E G L
Sbjct: 48 LERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGEL 107
Query: 60 EKYLYSSNCILDIFQR---LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDD---NL 113
+ + S+ +M + +AL Y H S V+H DLKP+N+L D +
Sbjct: 108 LERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHS 164
Query: 114 VAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPE-YGREGRVSTNGDVYSFGIMLMETF 172
+ DFG+A+L ++ S T T YMAPE + R+ V+ D++S G+++
Sbjct: 165 PIKIIDFGLAELFKSDEHS---TNAAGTALYMAPEVFKRD--VTFKCDIWSAGVVMYFLL 219
Query: 173 TGKKP 177
TG P
Sbjct: 220 TGCLP 224
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 10/157 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E E+ +RH N++++ + L+LEY P G++ + L D + + +
Sbjct: 84 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITE 142
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+A+AL Y H S VIH D+KP+N+LL ++DFG + S + T
Sbjct: 143 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRDDLCGT 195
Query: 142 IGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKP 177
+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 196 LDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 108/265 (40%), Gaps = 40/265 (15%)
Query: 1 MEVAVKVFNLQCGRAFK-SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
++VAVK C + F +E ++ H+N+++ I + ++LE M G L
Sbjct: 53 LQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDL 112
Query: 60 EKYLY------SSNCILDIFQRLNIMIDVASALEYL---HFGCSAPVIHCDLKPDNVLL- 109
+ +L S L + L++ D+A +YL HF IH D+ N LL
Sbjct: 113 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAARNCLLT 166
Query: 110 --DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIM 167
VA + DFG+A+ + + + +M PE EG ++ D +SFG++
Sbjct: 167 CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 226
Query: 168 LMETFT-GKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFV 226
L E F+ G P N E+ +E V + + D + C V
Sbjct: 227 LWEIFSLGYMPYPSKSNQEV--------------LEFVTSG--GRMD----PPKNCPGPV 266
Query: 227 FNLAMACTVESPEQRINAKEIVTKL 251
+ + C PE R N I+ ++
Sbjct: 267 YRIMTQCWQHQPEDRPNFAIILERI 291
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 106/265 (40%), Gaps = 40/265 (15%)
Query: 1 MEVAVKVFNLQCGRAFK-SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
++VAVK C + F +E ++ H+N+++ I + ++LE M G L
Sbjct: 61 LQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDL 120
Query: 60 EKYLY------SSNCILDIFQRLNIMIDVASALEYL---HFGCSAPVIHCDLKPDNVLL- 109
+ +L S L + L++ D+A +YL HF IH D+ N LL
Sbjct: 121 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAARNCLLT 174
Query: 110 --DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIM 167
VA + DFG+A+ + + + +M PE EG ++ D +SFG++
Sbjct: 175 CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 234
Query: 168 LMETFT-GKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFV 226
L E F+ G P N E+ +E V + + C V
Sbjct: 235 LWEIFSLGYMPYPSKSNQEV--------------LEFVTSGG------RMDPPKNCPGPV 274
Query: 227 FNLAMACTVESPEQRINAKEIVTKL 251
+ + C PE R N I+ ++
Sbjct: 275 YRIMTQCWQHQPEDRPNFAIILERI 299
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 106/265 (40%), Gaps = 40/265 (15%)
Query: 1 MEVAVKVFNLQCGRAFK-SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
++VAVK C + F +E ++ H+N+++ I + ++LE M G L
Sbjct: 68 LQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDL 127
Query: 60 EKYLY------SSNCILDIFQRLNIMIDVASALEYL---HFGCSAPVIHCDLKPDNVLL- 109
+ +L S L + L++ D+A +YL HF IH D+ N LL
Sbjct: 128 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAARNCLLT 181
Query: 110 --DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIM 167
VA + DFG+A+ + + + +M PE EG ++ D +SFG++
Sbjct: 182 CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 241
Query: 168 LMETFT-GKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFV 226
L E F+ G P N E+ +E V + + C V
Sbjct: 242 LWEIFSLGYMPYPSKSNQEV--------------LEFVTSGG------RMDPPKNCPGPV 281
Query: 227 FNLAMACTVESPEQRINAKEIVTKL 251
+ + C PE R N I+ ++
Sbjct: 282 YRIMTQCWQHQPEDRPNFAIILERI 306
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 12/153 (7%)
Query: 30 RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLY---------SSNCILDIFQRLNIMI 80
+H N++ ++ +C++ ++ EY +G L +L L++ L+
Sbjct: 100 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 159
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLA 140
VA + +L S IH D+ NVLL + VA + DFG+A+ ++ + + +
Sbjct: 160 QVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 216
Query: 141 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 173
+ +MAPE + + DV+S+GI+L E F+
Sbjct: 217 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 12/153 (7%)
Query: 30 RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLY---------SSNCILDIFQRLNIMI 80
+H N++ ++ +C++ ++ EY +G L +L L++ L+
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 167
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLA 140
VA + +L S IH D+ NVLL + VA + DFG+A+ ++ + + +
Sbjct: 168 QVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 224
Query: 141 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 173
+ +MAPE + + DV+S+GI+L E F+
Sbjct: 225 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 106/265 (40%), Gaps = 40/265 (15%)
Query: 1 MEVAVKVFNLQCGRAFK-SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
++VAVK C + F +E ++ H+N+++ I + ++LE M G L
Sbjct: 62 LQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDL 121
Query: 60 EKYLY------SSNCILDIFQRLNIMIDVASALEYL---HFGCSAPVIHCDLKPDNVLL- 109
+ +L S L + L++ D+A +YL HF IH D+ N LL
Sbjct: 122 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAARNCLLT 175
Query: 110 --DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIM 167
VA + DFG+A+ + + + +M PE EG ++ D +SFG++
Sbjct: 176 CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 235
Query: 168 LMETFT-GKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFV 226
L E F+ G P N E+ +E V + + C V
Sbjct: 236 LWEIFSLGYMPYPSKSNQEV--------------LEFVTSGG------RMDPPKNCPGPV 275
Query: 227 FNLAMACTVESPEQRINAKEIVTKL 251
+ + C PE R N I+ ++
Sbjct: 276 YRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 106/265 (40%), Gaps = 40/265 (15%)
Query: 1 MEVAVKVFNLQCGRAFK-SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
++VAVK C + F +E ++ H+N+++ I + ++LE M G L
Sbjct: 78 LQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDL 137
Query: 60 EKYLY------SSNCILDIFQRLNIMIDVASALEYL---HFGCSAPVIHCDLKPDNVLL- 109
+ +L S L + L++ D+A +YL HF IH D+ N LL
Sbjct: 138 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAARNCLLT 191
Query: 110 --DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIM 167
VA + DFG+A+ + + + +M PE EG ++ D +SFG++
Sbjct: 192 CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 251
Query: 168 LMETFT-GKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFV 226
L E F+ G P N E+ +E V + + C V
Sbjct: 252 LWEIFSLGYMPYPSKSNQEV--------------LEFVTSG------GRMDPPKNCPGPV 291
Query: 227 FNLAMACTVESPEQRINAKEIVTKL 251
+ + C PE R N I+ ++
Sbjct: 292 YRIMTQCWQHQPEDRPNFAIILERI 316
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 19/186 (10%)
Query: 1 MEVAVKVFNLQCGRAFK-SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
++VAVK C + F +E ++ H+N+++ I + ++LE M G L
Sbjct: 88 LQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDL 147
Query: 60 EKYLY------SSNCILDIFQRLNIMIDVASALEYL---HFGCSAPVIHCDLKPDNVLL- 109
+ +L S L + L++ D+A +YL HF IH D+ N LL
Sbjct: 148 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAARNCLLT 201
Query: 110 --DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIM 167
VA + DFG+A+ + + + +M PE EG ++ D +SFG++
Sbjct: 202 CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 261
Query: 168 LMETFT 173
L E F+
Sbjct: 262 LWEIFS 267
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 106/265 (40%), Gaps = 40/265 (15%)
Query: 1 MEVAVKVFNLQCGRAFK-SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
++VAVK C + F +E ++ H+N+++ I + ++LE M G L
Sbjct: 79 LQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDL 138
Query: 60 EKYLY------SSNCILDIFQRLNIMIDVASALEYL---HFGCSAPVIHCDLKPDNVLL- 109
+ +L S L + L++ D+A +YL HF IH D+ N LL
Sbjct: 139 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAARNCLLT 192
Query: 110 --DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIM 167
VA + DFG+A+ + + + +M PE EG ++ D +SFG++
Sbjct: 193 CPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 252
Query: 168 LMETFT-GKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFV 226
L E F+ G P N E+ +E V + + C V
Sbjct: 253 LWEIFSLGYMPYPSKSNQEV--------------LEFVTSG------GRMDPPKNCPGPV 292
Query: 227 FNLAMACTVESPEQRINAKEIVTKL 251
+ + C PE R N I+ ++
Sbjct: 293 YRIMTQCWQHQPEDRPNFAIILERI 317
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 106/265 (40%), Gaps = 40/265 (15%)
Query: 1 MEVAVKVFNLQCGRAFK-SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
++VAVK C + F +E ++ H+N+++ I + ++LE M G L
Sbjct: 102 LQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDL 161
Query: 60 EKYLY------SSNCILDIFQRLNIMIDVASALEYL---HFGCSAPVIHCDLKPDNVLL- 109
+ +L S L + L++ D+A +YL HF IH D+ N LL
Sbjct: 162 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAARNCLLT 215
Query: 110 --DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIM 167
VA + DFG+A+ + + + +M PE EG ++ D +SFG++
Sbjct: 216 CPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 275
Query: 168 LMETFT-GKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFV 226
L E F+ G P N E+ +E V + + C V
Sbjct: 276 LWEIFSLGYMPYPSKSNQEV--------------LEFVTSG------GRMDPPKNCPGPV 315
Query: 227 FNLAMACTVESPEQRINAKEIVTKL 251
+ + C PE R N I+ ++
Sbjct: 316 YRIMTQCWQHQPEDRPNFAIILERI 340
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 94/186 (50%), Gaps = 23/186 (12%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISS----CSNEEFKALVLEYMPHGS 58
VAVK+F +Q +++++ + E + ++H N+++ I + S + L+ + GS
Sbjct: 50 VAVKIFPIQDKQSWQN-EYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGS 108
Query: 59 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHF-------GCSAPVIHCDLKPDNVLLDD 111
L +L ++ ++ + +I +A L YLH G + H D+K NVLL +
Sbjct: 109 LSDFLKAN--VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKN 166
Query: 112 NLVAYLSDFGIA-KLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG------DVYSF 164
NL A ++DFG+A K G+ T Q + T YMAPE EG ++ D+Y+
Sbjct: 167 NLTACIADFGLALKFEAGKSAGDTHGQ-VGTRRYMAPEV-LEGAINFQRDAFLRIDMYAM 224
Query: 165 GIMLME 170
G++L E
Sbjct: 225 GLVLWE 230
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 29/193 (15%)
Query: 2 EVAVKVFNLQ--CGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
E A K+ N + R + + E + + ++H N++++ S S E F LV + + G L
Sbjct: 31 EYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGEL 90
Query: 60 -----EKYLYS----SNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLD 110
+ YS S+CI I + A+ + H V+H DLKP+N+LL
Sbjct: 91 FEDIVAREYYSEADASHCIQQILE----------AVLHCH---QMGVVHRDLKPENLLLA 137
Query: 111 D---NLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIM 167
L+DFG+A + G+ Q+ T GY++PE R+ D+++ G++
Sbjct: 138 SKCKGAAVKLADFGLAIEVQGDQQAWFGFA--GTPGYLSPEVLRKEAYGKPVDIWACGVI 195
Query: 168 LMETFTGKKPTYE 180
L G P ++
Sbjct: 196 LYILLVGYPPFWD 208
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 106/265 (40%), Gaps = 40/265 (15%)
Query: 1 MEVAVKVFNLQCGRAFK-SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
++VAVK C + F +E ++ H+N+++ I + ++LE M G L
Sbjct: 62 LQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDL 121
Query: 60 EKYLY------SSNCILDIFQRLNIMIDVASALEYL---HFGCSAPVIHCDLKPDNVLL- 109
+ +L S L + L++ D+A +YL HF IH D+ N LL
Sbjct: 122 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAARNCLLT 175
Query: 110 --DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIM 167
VA + DFG+A+ + + + +M PE EG ++ D +SFG++
Sbjct: 176 CPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 235
Query: 168 LMETFT-GKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFV 226
L E F+ G P N E+ +E V + + C V
Sbjct: 236 LWEIFSLGYMPYPSKSNQEV--------------LEFVTSGG------RMDPPKNCPGPV 275
Query: 227 FNLAMACTVESPEQRINAKEIVTKL 251
+ + C PE R N I+ ++
Sbjct: 276 YRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 19/186 (10%)
Query: 1 MEVAVKVFNLQCGRAFK-SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
++VAVK C + F +E ++ H+N+++ I + +++E M G L
Sbjct: 61 LQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDL 120
Query: 60 EKYLY------SSNCILDIFQRLNIMIDVASALEYL---HFGCSAPVIHCDLKPDNVLL- 109
+ +L S L + L++ D+A +YL HF IH D+ N LL
Sbjct: 121 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAARNCLLT 174
Query: 110 --DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIM 167
VA + DFG+A+ + + + +M PE EG ++ D +SFG++
Sbjct: 175 CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 234
Query: 168 LMETFT 173
L E F+
Sbjct: 235 LWEIFS 240
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 12/163 (7%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++M ++++ + ++++ +V+EYMP G L L S+ + + + + +
Sbjct: 125 ERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKF-YTAE 182
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQT-LA 140
V AL+ +H S +IH D+KPDN+LLD + L+DFG + ++ M T +
Sbjct: 183 VVLALDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKM--DETGMVHCDTAVG 237
Query: 141 TIGYMAPE----YGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
T Y++PE G +G D +S G+ L E G P Y
Sbjct: 238 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFY 280
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 106/265 (40%), Gaps = 40/265 (15%)
Query: 1 MEVAVKVFNLQCGRAFK-SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
++VAVK C + F +E ++ H+N+++ I + +++E M G L
Sbjct: 76 LQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDL 135
Query: 60 EKYLY------SSNCILDIFQRLNIMIDVASALEYL---HFGCSAPVIHCDLKPDNVLL- 109
+ +L S L + L++ D+A +YL HF IH D+ N LL
Sbjct: 136 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAARNCLLT 189
Query: 110 --DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIM 167
VA + DFG+A+ + + + +M PE EG ++ D +SFG++
Sbjct: 190 CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 249
Query: 168 LMETFT-GKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFV 226
L E F+ G P N E+ +E V + + C V
Sbjct: 250 LWEIFSLGYMPYPSKSNQEV--------------LEFVTSGG------RMDPPKNCPGPV 289
Query: 227 FNLAMACTVESPEQRINAKEIVTKL 251
+ + C PE R N I+ ++
Sbjct: 290 YRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 88/180 (48%), Gaps = 7/180 (3%)
Query: 1 MEVAVKVFNLQCGRA-FKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
++VA+KV +A + E ++M + + ++++I C E LV+E G L
Sbjct: 364 IDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEAL-MLVMEMAGGGPL 422
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
K+L + + ++ V+ ++YL +H +L NVLL + A +SD
Sbjct: 423 HKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISD 479
Query: 120 FGIAKLLIGEDQSMT-QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
FG++K L +D T ++ + + APE + S+ DV+S+G+ + E + G+KP
Sbjct: 480 FGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 539
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 10/150 (6%)
Query: 34 LIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 93
++++ + ++ + +V+EYMP G L L S+ + + + R +V AL+ +H
Sbjct: 131 VVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARF-YTAEVVLALDAIH--- 185
Query: 94 SAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPE----Y 149
S IH D+KPDN+LLD + L+DFG + E T + T Y++PE
Sbjct: 186 SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISPEVLKSQ 244
Query: 150 GREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
G +G D +S G+ L E G P Y
Sbjct: 245 GGDGYYGRECDWWSVGVFLYEMLVGDTPFY 274
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 10/150 (6%)
Query: 34 LIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 93
++++ + ++ + +V+EYMP G L L S+ + + + R +V AL+ +H
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARF-YTAEVVLALDAIH--- 190
Query: 94 SAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPE----Y 149
S IH D+KPDN+LLD + L+DFG + E T + T Y++PE
Sbjct: 191 SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISPEVLKSQ 249
Query: 150 GREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
G +G D +S G+ L E G P Y
Sbjct: 250 GGDGYYGRECDWWSVGVFLYEMLVGDTPFY 279
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 10/150 (6%)
Query: 34 LIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC 93
++++ + ++ + +V+EYMP G L L S+ + + + R +V AL+ +H
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARF-YTAEVVLALDAIH--- 190
Query: 94 SAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPE----Y 149
S IH D+KPDN+LLD + L+DFG + E T + T Y++PE
Sbjct: 191 SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISPEVLKSQ 249
Query: 150 GREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
G +G D +S G+ L E G P Y
Sbjct: 250 GGDGYYGRECDWWSVGVFLYEMLVGDTPFY 279
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 76/173 (43%), Gaps = 27/173 (15%)
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
VA +E+L S IH DL N+LL +N V + DFG+A+ + + + T
Sbjct: 208 VARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTYEFFNGEMTLKHWVNDWLPIST 200
+ +MAPE + ST DV+S+G++L E F+ G P P
Sbjct: 265 LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSP------------------YPGVQ 306
Query: 201 MEVVDANLLS--QEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL 251
M D + S +E + A E ++ + + C P++R E+V KL
Sbjct: 307 M---DEDFCSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 14/160 (8%)
Query: 26 MKSIRHRNLIKVISSC----SNEEFK-ALVLEYMPHGSLEKYL-YSSNCILDIFQRLNIM 79
+++ H N+++++ C ++ E K LV E++ L YL + L ++M
Sbjct: 68 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLM 126
Query: 80 IDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTL 139
L++LH C ++H DLKP+N+L+ L+DFG+A++ M T +
Sbjct: 127 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALTPVV 180
Query: 140 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
T+ Y APE + +T D++S G + E F +KP +
Sbjct: 181 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLF 219
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 29/193 (15%)
Query: 2 EVAVKVFNLQ--CGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
E A K+ N + R + + E + + ++H N++++ S S E L+ + + G L
Sbjct: 49 EYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL 108
Query: 60 -----EKYLYS----SNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLD 110
+ YS S+CI I + A+ + H V+H DLKP+N+LL
Sbjct: 109 FEDIVAREYYSEADASHCIQQILE----------AVLHCH---QMGVVHRDLKPENLLLA 155
Query: 111 DNL---VAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIM 167
L L+DFG+A + GE Q+ T GY++PE R+ D+++ G++
Sbjct: 156 SKLKGAAVKLADFGLAIEVEGEQQAWFGFA--GTPGYLSPEVLRKDPYGKPVDLWACGVI 213
Query: 168 LMETFTGKKPTYE 180
L G P ++
Sbjct: 214 LYILLVGYPPFWD 226
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 79/158 (50%), Gaps = 11/158 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +K +RH ++IK+ + +V+EY G L Y+ + + R
Sbjct: 59 EISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGR-RFFQQ 116
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ A+EY H ++H DLKP+N+LLDDNL ++DFG++ ++ D + +T + +
Sbjct: 117 IICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMT--DGNFLKT-SCGS 170
Query: 142 IGYMAPEYGREGRVSTNG--DVYSFGIMLMETFTGKKP 177
Y APE G++ DV+S GI+L G+ P
Sbjct: 171 PNYAAPEV-INGKLYAGPEVDVWSCGIVLYVMLVGRLP 207
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 85/167 (50%), Gaps = 14/167 (8%)
Query: 20 DVECEMMK------SIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 73
DVEC M++ + H L + + +E V+EY+ G L ++ S + D+
Sbjct: 61 DVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK-FDLS 119
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL-LIGEDQS 132
+ ++ L++LH S +++ DLK DN+LLD + ++DFG+ K ++G+ ++
Sbjct: 120 RATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT 176
Query: 133 MTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
+ T Y+APE + + + D +SFG++L E G+ P +
Sbjct: 177 ---NEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFH 220
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 115/247 (46%), Gaps = 27/247 (10%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKY 62
VAVK +L+ + + E +M+ +H N++++ +S + +V+E++ G+L
Sbjct: 59 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 118
Query: 63 LYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGI 122
+ ++ ++ Q + + V AL LH + VIH D+K D++LL + LSDFG
Sbjct: 119 V--THTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGF 173
Query: 123 AKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFF 182
+ E + + T +MAPE D++S GIM++E G+ P +F
Sbjct: 174 CAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP---YF 228
Query: 183 NGEMTLKHWVNDWLPISTMEVVDANLLSQ-EDIHFVAKEQCVSFVFNLAMACTVESPEQR 241
N P+ M+++ NL + +++H V+ F+ L V P QR
Sbjct: 229 NEP-----------PLKAMKMIRDNLPPRLKNLHKVSPS-LKGFLDRL----LVRDPAQR 272
Query: 242 INAKEIV 248
A E++
Sbjct: 273 ATAAELL 279
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 115/247 (46%), Gaps = 27/247 (10%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKY 62
VAVK +L+ + + E +M+ +H N++++ +S + +V+E++ G+L
Sbjct: 48 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 107
Query: 63 LYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGI 122
+ ++ ++ Q + + V AL LH + VIH D+K D++LL + LSDFG
Sbjct: 108 V--THTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGF 162
Query: 123 AKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFF 182
+ E + + T +MAPE D++S GIM++E G+ P +F
Sbjct: 163 CAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP---YF 217
Query: 183 NGEMTLKHWVNDWLPISTMEVVDANLLSQ-EDIHFVAKEQCVSFVFNLAMACTVESPEQR 241
N P+ M+++ NL + +++H V+ F+ L V P QR
Sbjct: 218 NEP-----------PLKAMKMIRDNLPPRLKNLHKVSP-SLKGFLDRL----LVRDPAQR 261
Query: 242 INAKEIV 248
A E++
Sbjct: 262 ATAAELL 268
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 78/156 (50%), Gaps = 12/156 (7%)
Query: 30 RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL---------YSSNCILDIFQRL---N 77
+H N++ ++ +C++ ++ EY +G L +L YS N + ++L +
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRD 167
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQ 137
++ + + + F S IH D+ NVLL + VA + DFG+A+ ++ + + +
Sbjct: 168 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 227
Query: 138 TLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 173
+ +MAPE + + DV+S+GI+L E F+
Sbjct: 228 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 90/192 (46%), Gaps = 10/192 (5%)
Query: 3 VAVKVFNLQCGRAFKSFDV-ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
VA+K L S + E +MK ++H N++++ E LV E+M L+K
Sbjct: 33 VALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFM-DNDLKK 91
Query: 62 YLYSSNCILDIFQRLNIMIDV---ASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
Y+ S + + + L + + L+ L F ++H DLKP N+L++ L
Sbjct: 92 YM-DSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLG 150
Query: 119 DFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTGKKP 177
DFG+A+ T + + T+ Y AP+ R ST+ D++S G +L E TG KP
Sbjct: 151 DFGLARAF--GIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITG-KP 207
Query: 178 TYEFFNGEMTLK 189
+ N E LK
Sbjct: 208 LFPGTNDEEQLK 219
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 115/247 (46%), Gaps = 27/247 (10%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKY 62
VAVK +L+ + + E +M+ +H N++++ +S + +V+E++ G+L
Sbjct: 52 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 111
Query: 63 LYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGI 122
+ ++ ++ Q + + V AL LH + VIH D+K D++LL + LSDFG
Sbjct: 112 V--THTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGF 166
Query: 123 AKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFF 182
+ E + + T +MAPE D++S GIM++E G+ P +F
Sbjct: 167 CAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP---YF 221
Query: 183 NGEMTLKHWVNDWLPISTMEVVDANLLSQ-EDIHFVAKEQCVSFVFNLAMACTVESPEQR 241
N P+ M+++ NL + +++H V+ F+ L V P QR
Sbjct: 222 NEP-----------PLKAMKMIRDNLPPRLKNLHKVSP-SLKGFLDRL----LVRDPAQR 265
Query: 242 INAKEIV 248
A E++
Sbjct: 266 ATAAELL 272
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 115/247 (46%), Gaps = 27/247 (10%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKY 62
VAVK +L+ + + E +M+ +H N++++ +S + +V+E++ G+L
Sbjct: 57 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 116
Query: 63 LYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGI 122
+ ++ ++ Q + + V AL LH + VIH D+K D++LL + LSDFG
Sbjct: 117 V--THTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGF 171
Query: 123 AKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFF 182
+ E + + T +MAPE D++S GIM++E G+ P +F
Sbjct: 172 CAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP---YF 226
Query: 183 NGEMTLKHWVNDWLPISTMEVVDANLLSQ-EDIHFVAKEQCVSFVFNLAMACTVESPEQR 241
N P+ M+++ NL + +++H V+ F+ L V P QR
Sbjct: 227 NEP-----------PLKAMKMIRDNLPPRLKNLHKVSPS-LKGFLDRL----LVRDPAQR 270
Query: 242 INAKEIV 248
A E++
Sbjct: 271 ATAAELL 277
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 105/265 (39%), Gaps = 39/265 (14%)
Query: 2 EVAVKVFNLQ--CGRAFKSFDVECEMMKSIRHRNLIKVISSCSNE--EFKALVLEYMPHG 57
++ VKV ++ R + F+ EC ++ H N++ V+ +C + L+ + P+G
Sbjct: 35 DIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXPYG 94
Query: 58 SLEKYLY-SSNCILDIFQRLNIMIDVASALEYLHFGCSAPVI--HCDLKPDNVLLDDNLV 114
SL L+ +N ++D Q + +D A +LH P+I H L +V +D++
Sbjct: 95 SLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLH--TLEPLIPRHA-LNSRSVXIDEDXT 151
Query: 115 AYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTN---GDVYSFGIMLMET 171
A +S + S ++APE ++ TN D +SF ++L E
Sbjct: 152 ARISXADVK-------FSFQSPGRXYAPAWVAPEALQKKPEDTNRRSADXWSFAVLLWEL 204
Query: 172 FTGKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAM 231
T + P + N E+ K ++ E + V L
Sbjct: 205 VTREVPFADLSNXEIGXK-------------------VALEGLRPTIPPGISPHVSKLXK 245
Query: 232 ACTVESPEQRINAKEIVTKLLKIRD 256
C E P +R IV L K +D
Sbjct: 246 ICXNEDPAKRPKFDXIVPILEKXQD 270
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 115/247 (46%), Gaps = 27/247 (10%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKY 62
VAVK +L+ + + E +M+ +H N++++ +S + +V+E++ G+L
Sbjct: 102 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 161
Query: 63 LYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGI 122
+ ++ ++ Q + + V AL LH + VIH D+K D++LL + LSDFG
Sbjct: 162 V--THTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGF 216
Query: 123 AKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFF 182
+ E + + T +MAPE D++S GIM++E G+ P +F
Sbjct: 217 CAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP---YF 271
Query: 183 NGEMTLKHWVNDWLPISTMEVVDANLLSQ-EDIHFVAKEQCVSFVFNLAMACTVESPEQR 241
N P+ M+++ NL + +++H V+ F+ L V P QR
Sbjct: 272 NEP-----------PLKAMKMIRDNLPPRLKNLHKVSPS-LKGFLDRL----LVRDPAQR 315
Query: 242 INAKEIV 248
A E++
Sbjct: 316 ATAAELL 322
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 16/164 (9%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
VE +++ + R ++ + + + LV+ M G + ++Y+ + FQ +
Sbjct: 234 VEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 81 ---DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIA-KLLIGEDQSMTQT 136
+ S LE+LH +I+ DLKP+NVLLDD+ +SD G+A +L G+ T+T
Sbjct: 294 YTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ----TKT 346
Query: 137 QTLA-TIGYMAPE--YGREGRVSTNGDVYSFGIMLMETFTGKKP 177
+ A T G+MAPE G E S D ++ G+ L E + P
Sbjct: 347 KGYAGTPGFMAPELLLGEEYDFSV--DYFALGVTLYEMIAARGP 388
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 16/164 (9%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
VE +++ + R ++ + + + LV+ M G + ++Y+ + FQ +
Sbjct: 234 VEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 81 ---DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIA-KLLIGEDQSMTQT 136
+ S LE+LH +I+ DLKP+NVLLDD+ +SD G+A +L G+ T+T
Sbjct: 294 YTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ----TKT 346
Query: 137 QTLA-TIGYMAPE--YGREGRVSTNGDVYSFGIMLMETFTGKKP 177
+ A T G+MAPE G E S D ++ G+ L E + P
Sbjct: 347 KGYAGTPGFMAPELLLGEEYDFSV--DYFALGVTLYEMIAARGP 388
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 16/164 (9%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
VE +++ + R ++ + + + LV+ M G + ++Y+ + FQ +
Sbjct: 234 VEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 81 ---DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIA-KLLIGEDQSMTQT 136
+ S LE+LH +I+ DLKP+NVLLDD+ +SD G+A +L G+ T+T
Sbjct: 294 YTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ----TKT 346
Query: 137 QTLA-TIGYMAPE--YGREGRVSTNGDVYSFGIMLMETFTGKKP 177
+ A T G+MAPE G E S D ++ G+ L E + P
Sbjct: 347 KGYAGTPGFMAPELLLGEEYDFSV--DYFALGVTLYEMIAARGP 388
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 88/176 (50%), Gaps = 32/176 (18%)
Query: 20 DVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL------EKYLYSSNCILDIF 73
+ E E++K + H +IK+ + E++ +VLE M G L K L + C L +
Sbjct: 202 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 260
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL---DDNLVAYLSDFGIAKLLIGED 130
Q L A++YLH +IH DLKP+NVLL +++ + ++DFG +K+L GE
Sbjct: 261 QML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GET 309
Query: 131 QSMTQTQTL-ATIGYMAPEYGREGRVSTNG-----DVYSFGIMLMETFTGKKPTYE 180
M +TL T Y+APE V T G D +S G++L +G P E
Sbjct: 310 SLM---RTLCGTPTYLAPEVLVS--VGTAGYNRAVDCWSLGVILFICLSGYPPFSE 360
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 16/164 (9%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
VE +++ + R ++ + + + LV+ M G + ++Y+ + FQ +
Sbjct: 234 VEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 81 ---DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIA-KLLIGEDQSMTQT 136
+ S LE+LH +I+ DLKP+NVLLDD+ +SD G+A +L G+ T+T
Sbjct: 294 YTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ----TKT 346
Query: 137 QTLA-TIGYMAPE--YGREGRVSTNGDVYSFGIMLMETFTGKKP 177
+ A T G+MAPE G E S D ++ G+ L E + P
Sbjct: 347 KGYAGTPGFMAPELLLGEEYDFSV--DYFALGVTLYEMIAARGP 388
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 88/176 (50%), Gaps = 32/176 (18%)
Query: 20 DVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL------EKYLYSSNCILDIF 73
+ E E++K + H +IK+ + E++ +VLE M G L K L + C L +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL---DDNLVAYLSDFGIAKLLIGED 130
Q L A++YLH +IH DLKP+NVLL +++ + ++DFG +K+L GE
Sbjct: 122 QML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GET 170
Query: 131 QSMTQTQTL-ATIGYMAPEYGREGRVSTNG-----DVYSFGIMLMETFTGKKPTYE 180
M +TL T Y+APE V T G D +S G++L +G P E
Sbjct: 171 SLM---RTLCGTPTYLAPEVLVS--VGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 88/176 (50%), Gaps = 32/176 (18%)
Query: 20 DVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL------EKYLYSSNCILDIF 73
+ E E++K + H +IK+ + E++ +VLE M G L K L + C L +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL---DDNLVAYLSDFGIAKLLIGED 130
Q L A++YLH +IH DLKP+NVLL +++ + ++DFG +K+L GE
Sbjct: 122 QML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GET 170
Query: 131 QSMTQTQTL-ATIGYMAPEYGREGRVSTNG-----DVYSFGIMLMETFTGKKPTYE 180
M +TL T Y+APE V T G D +S G++L +G P E
Sbjct: 171 SLM---RTLCGTPTYLAPEVLVS--VGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 88/176 (50%), Gaps = 32/176 (18%)
Query: 20 DVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL------EKYLYSSNCILDIF 73
+ E E++K + H +IK+ + E++ +VLE M G L K L + C L +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL---DDNLVAYLSDFGIAKLLIGED 130
Q L A++YLH +IH DLKP+NVLL +++ + ++DFG +K+L GE
Sbjct: 122 QML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GET 170
Query: 131 QSMTQTQTL-ATIGYMAPEYGREGRVSTNG-----DVYSFGIMLMETFTGKKPTYE 180
M +TL T Y+APE V T G D +S G++L +G P E
Sbjct: 171 SLM---RTLCGTPTYLAPEVLVS--VGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 88/176 (50%), Gaps = 32/176 (18%)
Query: 20 DVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL------EKYLYSSNCILDIF 73
+ E E++K + H +IK+ + E++ +VLE M G L K L + C L +
Sbjct: 62 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 120
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL---DDNLVAYLSDFGIAKLLIGED 130
Q L A++YLH +IH DLKP+NVLL +++ + ++DFG +K+L GE
Sbjct: 121 QML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GET 169
Query: 131 QSMTQTQTL-ATIGYMAPEYGREGRVSTNG-----DVYSFGIMLMETFTGKKPTYE 180
M +TL T Y+APE V T G D +S G++L +G P E
Sbjct: 170 SLM---RTLCGTPTYLAPEVLVS--VGTAGYNRAVDCWSLGVILFICLSGYPPFSE 220
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 84/167 (50%), Gaps = 14/167 (8%)
Query: 20 DVECEMMK------SIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 73
DVEC M++ + H L + + +E V+EY+ G L ++ S + D+
Sbjct: 60 DVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK-FDLS 118
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL-LIGEDQS 132
+ ++ L++LH S +++ DLK DN+LLD + ++DFG+ K ++G+ ++
Sbjct: 119 RATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT 175
Query: 133 MTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
T Y+APE + + + D +SFG++L E G+ P +
Sbjct: 176 ---NXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFH 219
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 88/176 (50%), Gaps = 32/176 (18%)
Query: 20 DVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL------EKYLYSSNCILDIF 73
+ E E++K + H +IK+ + E++ +VLE M G L K L + C L +
Sbjct: 188 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 246
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL---DDNLVAYLSDFGIAKLLIGED 130
Q L A++YLH +IH DLKP+NVLL +++ + ++DFG +K+L GE
Sbjct: 247 QML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GET 295
Query: 131 QSMTQTQTL-ATIGYMAPEYGREGRVSTNG-----DVYSFGIMLMETFTGKKPTYE 180
M +TL T Y+APE V T G D +S G++L +G P E
Sbjct: 296 SLM---RTLCGTPTYLAPEVLVS--VGTAGYNRAVDCWSLGVILFICLSGYPPFSE 346
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 18/162 (11%)
Query: 31 HRNLIKVISSCSNEEFKALVL-EYMPHGSLEKYL---------YSSNCILDIFQRLNIMI 80
H N++ ++ +C+ +V+ E+ G+L YL Y + F L +I
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLI 151
Query: 81 ----DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQT 136
VA +E+L S IH DL N+LL + V + DFG+A+ + + + +
Sbjct: 152 XYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 137 QTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
+ +MAPE + + DV+SFG++L E F+ G P
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 88/176 (50%), Gaps = 32/176 (18%)
Query: 20 DVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL------EKYLYSSNCILDIF 73
+ E E++K + H +IK+ + E++ +VLE M G L K L + C L +
Sbjct: 69 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 127
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL---DDNLVAYLSDFGIAKLLIGED 130
Q L A++YLH +IH DLKP+NVLL +++ + ++DFG +K+L GE
Sbjct: 128 QML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GET 176
Query: 131 QSMTQTQTL-ATIGYMAPEYGREGRVSTNG-----DVYSFGIMLMETFTGKKPTYE 180
M +TL T Y+APE V T G D +S G++L +G P E
Sbjct: 177 SLM---RTLCGTPTYLAPEVLVS--VGTAGYNRAVDCWSLGVILFICLSGYPPFSE 227
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 14/160 (8%)
Query: 26 MKSIRHRNLIKVISSC----SNEEFK-ALVLEYMPHGSLEKYL-YSSNCILDIFQRLNIM 79
+++ H N+++++ C ++ E K LV E++ L YL + L ++M
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 80 IDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTL 139
L++LH C ++H DLKP+N+L+ L+DFG+A++ M +
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALAPVV 172
Query: 140 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
T+ Y APE + +T D++S G + E F +KP +
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLF 211
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 87/192 (45%), Gaps = 24/192 (12%)
Query: 2 EVAVKVFN---LQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
EVAVK+ + L K F E +MK + H N++K+ E+ LV+EY G
Sbjct: 34 EVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE 92
Query: 59 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
+ YL + + + R + SA++Y H ++H DLK +N+LLD ++ ++
Sbjct: 93 VFDYLVAHGWMKEKEARAKFR-QIVSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIA 148
Query: 119 DFGIAKLLIGEDQSMTQTQTLATI----GYMAPEYGREGRV-STNGDVYSFGIMLMETFT 173
DFG + T L T Y APE + + DV+S G++L +
Sbjct: 149 DFGFS-------NEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 201
Query: 174 GKKPTYEFFNGE 185
G P F+G+
Sbjct: 202 GSLP----FDGQ 209
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 16/160 (10%)
Query: 31 HRNLIKVISSCSNEEFKALVL-EYMPHGSLEKYLYSSNC-----------ILDIFQRLNI 78
H N++ ++ +C+ +V+ E+ G+L YL S L + +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 79 MIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQT 138
VA +E+L S IH DL N+LL + V + DFG+A+ + + + +
Sbjct: 150 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDA 206
Query: 139 LATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
+ +MAPE + + DV+SFG++L E F+ G P
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 246
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 115/247 (46%), Gaps = 27/247 (10%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKY 62
VAVK +L+ + + E +M+ +H N++++ +S + +V+E++ G+L
Sbjct: 179 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 238
Query: 63 LYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGI 122
+ ++ ++ Q + + V AL LH + VIH D+K D++LL + LSDFG
Sbjct: 239 V--THTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGF 293
Query: 123 AKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFF 182
+ E + + T +MAPE D++S GIM++E G+ P +F
Sbjct: 294 CAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP---YF 348
Query: 183 NGEMTLKHWVNDWLPISTMEVVDANLLSQ-EDIHFVAKEQCVSFVFNLAMACTVESPEQR 241
N P+ M+++ NL + +++H V+ F+ L V P QR
Sbjct: 349 NEP-----------PLKAMKMIRDNLPPRLKNLHKVSPS-LKGFLDRL----LVRDPAQR 392
Query: 242 INAKEIV 248
A E++
Sbjct: 393 ATAAELL 399
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 98/246 (39%), Gaps = 39/246 (15%)
Query: 19 FDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLY------SSNCILDI 72
F +E ++ H+N+++ I + ++LE M G L+ +L S L +
Sbjct: 95 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 73 FQRLNIMIDVASALEYL---HFGCSAPVIHCDLKPDNVLL---DDNLVAYLSDFGIAKLL 126
L++ D+A +YL HF IH D+ N LL VA + DFG+A+ +
Sbjct: 155 LDLLHVARDIACGCQYLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 208
Query: 127 IGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTYEFFNGE 185
+ + +M PE EG ++ D +SFG++L E F+ G P N E
Sbjct: 209 YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 268
Query: 186 MTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAK 245
+ +E V + + C V+ + C PE R N
Sbjct: 269 V--------------LEFVTSGG------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 308
Query: 246 EIVTKL 251
I+ ++
Sbjct: 309 IILERI 314
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 114/268 (42%), Gaps = 37/268 (13%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
+ AVK L+ RA + + C + S R ++ + + + + +E + GSL +
Sbjct: 101 QCAVKKVRLEVFRAEEL--MACAGLTSPR---IVPLYGAVREGPWVNIFMELLEGGSLGQ 155
Query: 62 YLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLD-DNLVAYLSDF 120
+ C+ + + L + LEYLH S ++H D+K DNVLL D A L DF
Sbjct: 156 LVKEQGCLPED-RALYYLGQALEGLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDF 211
Query: 121 GIAKLL----IGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKK 176
G A L +G+D +T T +MAPE DV+S M++ G
Sbjct: 212 GHAVCLQPDGLGKDL-LTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCH 270
Query: 177 PTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVE 236
P +FF G + LK ++ P+ + A L +Q + KE
Sbjct: 271 PWTQFFRGPLCLK-IASEPPPVREIPPSCAPLTAQAIQEGLRKE---------------- 313
Query: 237 SPEQRINAKEIVTKLLKIRDSLLRNVGG 264
P R++A E+ K+ + L+ VGG
Sbjct: 314 -PIHRVSAAELGGKV----NRALQQVGG 336
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 14/124 (11%)
Query: 61 KYLYSSNCILD--IFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
KY+YS +LD I + + I +A+ H + +IH D+KP N+LLD + L
Sbjct: 112 KYVYS---VLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLC 168
Query: 119 DFGIAKLLIGEDQSMTQTQTLATIGYMAPEY-----GREGRVSTNGDVYSFGIMLMETFT 173
DFGI+ L+ S+ +T+ YMAPE R+G DV+S GI L E T
Sbjct: 169 DFGISGQLV---DSIAKTRDAGCRPYMAPERIDPSASRQG-YDVRSDVWSLGITLYELAT 224
Query: 174 GKKP 177
G+ P
Sbjct: 225 GRFP 228
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++K + H N++ +I +E LV E+M L+K L + L Q +
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQ 127
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ + + H ++H DLKP N+L++ + L+DFG+A+ +S T + T
Sbjct: 128 LLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVT 182
Query: 142 IGYMAPE--YGREGRVSTNGDVYSFGIMLMETFTGK 175
+ Y AP+ G + + ST+ D++S G + E TGK
Sbjct: 183 LWYRAPDVLMGSK-KYSTSVDIWSIGCIFAEMITGK 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++K + H N++ +I +E LV E+M L+K L + L Q I I
Sbjct: 69 EISLLKELHHPNIVSLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGL---QDSQIKIY 124
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ L + ++H DLKP N+L++ + L+DFG+A+ +S T + T
Sbjct: 125 LYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVT 182
Query: 142 IGYMAPE--YGREGRVSTNGDVYSFGIMLMETFTGK 175
+ Y AP+ G + + ST+ D++S G + E TGK
Sbjct: 183 LWYRAPDVLMGSK-KYSTSVDIWSIGCIFAEMITGK 217
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 14/160 (8%)
Query: 26 MKSIRHRNLIKVISSC----SNEEFK-ALVLEYMPHGSLEKYL-YSSNCILDIFQRLNIM 79
+++ H N+++++ C ++ E K LV E++ L YL + L ++M
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 80 IDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTL 139
L++LH C ++H DLKP+N+L+ L+DFG+A++ M +
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALDPVV 172
Query: 140 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
T+ Y APE + +T D++S G + E F +KP +
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLF 211
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 22/172 (12%)
Query: 18 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL-----EKYLYSS-NCILD 71
S + E ++ I+H N++ + + L+++ + G L EK Y+ +
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 72 IFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVL---LDDNLVAYLSDFGIAKLLIG 128
IFQ L+ A++YLH ++H DLKP+N+L LD++ +SDFG++K+
Sbjct: 122 IFQVLD-------AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--- 168
Query: 129 EDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYE 180
ED + T GY+APE + S D +S G++ G P Y+
Sbjct: 169 EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYD 220
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 16/160 (10%)
Query: 31 HRNLIKVISSCSNEEFKALVL-EYMPHGSLEKYLYSSNC-------ILDIFQRLNIMI-- 80
H N++ ++ +C+ +V+ E+ G+L YL S + F L +I
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 81 --DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQT 138
VA +E+L S IH DL N+LL + V + DFG+A+ + + + +
Sbjct: 150 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 206
Query: 139 LATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
+ +MAPE + + DV+SFG++L E F+ G P
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 246
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 22/172 (12%)
Query: 18 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL-----EKYLYSS-NCILD 71
S + E ++ I+H N++ + + L+++ + G L EK Y+ +
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 72 IFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVL---LDDNLVAYLSDFGIAKLLIG 128
IFQ L+ A++YLH ++H DLKP+N+L LD++ +SDFG++K+
Sbjct: 122 IFQVLD-------AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--- 168
Query: 129 EDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYE 180
ED + T GY+APE + S D +S G++ G P Y+
Sbjct: 169 EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYD 220
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 121/285 (42%), Gaps = 45/285 (15%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSI--RHRNLIKVISSCSNEEFKA----LVLEYMPH 56
VAVK+F+ R +S+ E E+ ++ RH N++ I+S + L+ Y H
Sbjct: 34 VAVKIFS---SRDEQSWFRETEIYNTVLLRHDNILGFIASDMTSRNSSTQLWLITHYHEH 90
Query: 57 GSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH---FGCSA-PVI-HCDLKPDNVLLDD 111
GSL +L L+ L + + A L +LH FG P I H D K NVL+
Sbjct: 91 GSLYDFLQRQT--LEPHLALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKS 148
Query: 112 NLVAYLSDFGIAKLLI-GEDQ-SMTQTQTLATIGYMAPEYGREGRVSTN-------GDVY 162
NL ++D G+A + G D + + T YMAPE E ++ T+ D++
Sbjct: 149 NLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDE-QIRTDCFESYKWTDIW 207
Query: 163 SFGIMLMETFTG----------KKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQE 212
+FG++L E + P Y+ + + + +VV + +
Sbjct: 208 AFGLVLWEIARRTIVNGIVEDYRPPFYDVVPNDPSFE---------DMKKVVCVDQQTPT 258
Query: 213 DIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDS 257
+ +A + +S + + C +P R+ A I L KI +S
Sbjct: 259 IPNRLAADPVLSGLAQMMRECWYPNPSARLTALRIKKTLQKISNS 303
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 14/160 (8%)
Query: 26 MKSIRHRNLIKVISSC----SNEEFK-ALVLEYMPHGSLEKYL-YSSNCILDIFQRLNIM 79
+++ H N+++++ C ++ E K LV E++ L YL + L ++M
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 80 IDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTL 139
L++LH C ++H DLKP+N+L+ L+DFG+A++ M +
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALFPVV 172
Query: 140 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
T+ Y APE + +T D++S G + E F +KP +
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLF 211
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++KS+ H N+IK+ ++++ LV E+ G L + + + + D NIM
Sbjct: 96 EISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK-FDECDAANIMKQ 154
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDN---LVAYLSDFGIAKLLIGEDQSMTQTQT 138
+ S + YLH ++H D+KP+N+LL++ L + DFG++ +
Sbjct: 155 ILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF---SKDYKLRDR 208
Query: 139 LATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
L T Y+APE ++ + + DV+S G+++ G P
Sbjct: 209 LGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPP 246
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 88/188 (46%), Gaps = 16/188 (8%)
Query: 2 EVAVKVFN---LQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
EVAVK+ + L K F E +MK + H N++K+ E+ LV+EY G
Sbjct: 41 EVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE 99
Query: 59 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
+ YL + + + R + SA++Y H ++H DLK +N+LLD ++ ++
Sbjct: 100 VFDYLVAHGRMKEKEARAKFR-QIVSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIA 155
Query: 119 DFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTGKKP 177
DFG + ++ T + Y APE + + DV+S G++L +G P
Sbjct: 156 DFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
Query: 178 TYEFFNGE 185
F+G+
Sbjct: 213 ----FDGQ 216
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 10/157 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E E+ +RH N++++ + + + L+LE+ P G L K L + D + M +
Sbjct: 64 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFMEE 122
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+A AL Y H VIH D+KP+N+L+ ++DFG + S+ + T
Sbjct: 123 LADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWS----VHAPSLRRRXMCGT 175
Query: 142 IGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKP 177
+ Y+ PE EG+ D++ G++ E G P
Sbjct: 176 LDYLPPEMI-EGKTHDEKVDLWCAGVLCYEFLVGMPP 211
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 22/172 (12%)
Query: 18 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL-----EKYLYSS-NCILD 71
S + E ++ I+H N++ + + L+++ + G L EK Y+ +
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 72 IFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVL---LDDNLVAYLSDFGIAKLLIG 128
IFQ L+ A++YLH ++H DLKP+N+L LD++ +SDFG++K+
Sbjct: 122 IFQVLD-------AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--- 168
Query: 129 EDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYE 180
ED + T GY+APE + S D +S G++ G P Y+
Sbjct: 169 EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYD 220
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 22/172 (12%)
Query: 18 SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL-----EKYLYSS-NCILD 71
S + E ++ I+H N++ + + L+++ + G L EK Y+ +
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 72 IFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVL---LDDNLVAYLSDFGIAKLLIG 128
IFQ L+ A++YLH ++H DLKP+N+L LD++ +SDFG++K+
Sbjct: 122 IFQVLD-------AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--- 168
Query: 129 EDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYE 180
ED + T GY+APE + S D +S G++ G P Y+
Sbjct: 169 EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYD 220
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 88/188 (46%), Gaps = 16/188 (8%)
Query: 2 EVAVKVFN---LQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
EVAVK+ + L K F E +MK + H N++K+ E+ LV+EY G
Sbjct: 41 EVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE 99
Query: 59 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
+ YL + + + R + SA++Y H ++H DLK +N+LLD ++ ++
Sbjct: 100 VFDYLVAHGRMKEKEARAKFR-QIVSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIA 155
Query: 119 DFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTGKKP 177
DFG + ++ T + Y APE + + DV+S G++L +G P
Sbjct: 156 DFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
Query: 178 TYEFFNGE 185
F+G+
Sbjct: 213 ----FDGQ 216
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 10/157 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E E+ +RH N++++ + + + L+LE+ P G L K L + D + M +
Sbjct: 65 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFMEE 123
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+A AL Y H VIH D+KP+N+L+ ++DFG + S+ + T
Sbjct: 124 LADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSV----HAPSLRRRXMCGT 176
Query: 142 IGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKP 177
+ Y+ PE EG+ D++ G++ E G P
Sbjct: 177 LDYLPPEMI-EGKTHDEKVDLWCAGVLCYEFLVGMPP 212
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EYMP G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+L+D ++DFG AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE--- 203
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 204 --YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EYMP G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+L+D ++DFG AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE--- 203
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 204 --YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 10/157 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E E+ +RH N++++ + + + L+LE+ P G L K L + D + M +
Sbjct: 64 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFMEE 122
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+A AL Y H VIH D+KP+N+L+ ++DFG + S+ + T
Sbjct: 123 LADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSV----HAPSLRRRXMCGT 175
Query: 142 IGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKP 177
+ Y+ PE EG+ D++ G++ E G P
Sbjct: 176 LDYLPPEMI-EGKTHDEKVDLWCAGVLCYEFLVGMPP 211
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 11/159 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY+P G + +L + R
Sbjct: 77 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 135
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTL-A 140
+ EYLH S +I+ DLKP+N+L+D ++DFG AK + G +T TL
Sbjct: 136 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWTLCG 186
Query: 141 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
T Y+APE + D ++ G+++ E G P +
Sbjct: 187 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 225
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 99 HCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ-TQTLATIGYMAPEYGREGRVST 157
H D+KP+N+L+ + AYL DFGIA D+ +TQ T+ T+ Y APE E +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATT--DEKLTQLGNTVGTLYYXAPERFSESHATY 214
Query: 158 NGDVYSFGIMLMETFTGKKP 177
D+Y+ +L E TG P
Sbjct: 215 RADIYALTCVLYECLTGSPP 234
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 86/185 (46%), Gaps = 10/185 (5%)
Query: 1 MEVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLE 60
M+V K ++ + E +++ ++H ++ +I + L+LEY+ G L
Sbjct: 50 MKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELF 109
Query: 61 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
L ++ + +++ AL +LH +I+ DLKP+N++L+ L+DF
Sbjct: 110 MQLEREGIFMEDTACF-YLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDF 165
Query: 121 GIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYE 180
G+ K I D ++T T TI YMAPE + D +S G ++ + TG P
Sbjct: 166 GLCKESI-HDGTVTHT-FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP--- 220
Query: 181 FFNGE 185
F GE
Sbjct: 221 -FTGE 224
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 95/203 (46%), Gaps = 28/203 (13%)
Query: 48 ALVLEYMPHGSLEKYLYSSNCILD-IFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDN 106
++ +E+M GSL++ L + I + I +++I V L YL ++H D+KP N
Sbjct: 83 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLRE--KHKIMHRDVKPSN 138
Query: 107 VLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGI 166
+L++ L DFG++ LI E + + T YM+PE + S D++S G+
Sbjct: 139 ILVNSRGEIKLCDFGVSGQLIDE----MANEFVGTRSYMSPERLQGTHYSVQSDIWSMGL 194
Query: 167 MLMETFTGKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFV 226
L+E G+ P E+ L + VN+ P + + + S E FV K
Sbjct: 195 SLVEMAVGRYPRPPMAIFEL-LDYIVNEPPP-----KLPSAVFSLEFQDFVNK------- 241
Query: 227 FNLAMACTVESPEQRINAKEIVT 249
C +++P +R + K+++
Sbjct: 242 ------CLIKNPAERADLKQLMV 258
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 11/159 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY+P G + +L + R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 150
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTL-A 140
+ EYLH S +I+ DLKP+N+L+D ++DFG AK + G +T TL
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWTLCG 201
Query: 141 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
T Y+APE + D ++ G+++ E G P +
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 22/191 (11%)
Query: 2 EVAVKVFNLQ--CGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
EVAVK+ + + + E +MK + H N++K+ E+ LV+EY G +
Sbjct: 42 EVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEV 101
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
YL + + + R + SA++Y H ++H DLK +N+LLD ++ ++D
Sbjct: 102 FDYLVAHGRMKEKEARAKFR-QIVSAVQYCH---QKYIVHRDLKAENLLLDGDMNIKIAD 157
Query: 120 FGIAKLLIGEDQSMTQTQTLATI----GYMAPEYGREGRV-STNGDVYSFGIMLMETFTG 174
FG + T L T Y APE + + DV+S G++L +G
Sbjct: 158 FGFS-------NEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
Query: 175 KKPTYEFFNGE 185
P F+G+
Sbjct: 211 SLP----FDGQ 217
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 15/158 (9%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E M+K ++H NL+ ++ + LV EY H L + LD +QR
Sbjct: 52 EIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHE--------LDRYQRGVPEHL 103
Query: 82 VAS----ALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQ 137
V S L+ ++F IH D+KP+N+L+ + V L DFG A+LL G S
Sbjct: 104 VKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGP--SDYYDD 161
Query: 138 TLATIGYMAPE-YGREGRVSTNGDVYSFGIMLMETFTG 174
+AT Y +PE + + DV++ G + E +G
Sbjct: 162 EVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 5/165 (3%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 73
+A K E +M S+ + ++ +++ C + L+++ MP G L Y+ +
Sbjct: 60 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQ 118
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSM 133
LN + +A + YL ++H DL NVL+ ++DFG+AKLL E++
Sbjct: 119 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 175
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
I +MA E + DV+S+G+ + E T G KP
Sbjct: 176 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 5/165 (3%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 73
+A K E +M S+ + ++ +++ C + L+++ MP G L Y+ +
Sbjct: 62 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQ 120
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSM 133
LN + +A + YL ++H DL NVL+ ++DFG+AKLL E++
Sbjct: 121 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 177
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
I +MA E + DV+S+G+ + E T G KP
Sbjct: 178 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 20/164 (12%)
Query: 31 HRNLIKVISSCSNEEFKALVL-EYMPHGSLEKYLYSSN--------CILDIFQRLNIM-- 79
H N++ ++ +C+ +V+ E+ G+L YL S D+++ +
Sbjct: 81 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 80 -----IDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMT 134
VA +E+L S IH DL N+LL + V + DFG+A+ + + +
Sbjct: 141 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 135 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
+ + +MAPE + + DV+SFG++L E F+ G P
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 75/152 (49%), Gaps = 12/152 (7%)
Query: 22 ECEMMKSIRHRNLIKVISSC--SNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIM 79
E ++K + H N++K++ NE+ +V E + G + + D Q
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSED--QARFYF 143
Query: 80 IDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTL 139
D+ +EYLH+ +IH D+KP N+L+ ++ ++DFG++ G D + + T+
Sbjct: 144 QDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALL--SNTV 198
Query: 140 ATIGYMAPEYGREGRVSTNG---DVYSFGIML 168
T +MAPE E R +G DV++ G+ L
Sbjct: 199 GTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 20/164 (12%)
Query: 31 HRNLIKVISSCSNEEFKALVL-EYMPHGSLEKYLYSSN--------CILDIFQRLNIM-- 79
H N++ ++ +C+ +V+ E+ G+L YL S D+++ +
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 80 -----IDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMT 134
VA +E+L S IH DL N+LL + V + DFG+A+ + + +
Sbjct: 141 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 135 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
+ + +MAPE + + DV+SFG++L E F+ G P
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 5/165 (3%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 73
+A K E +M S+ + ++ +++ C + L+++ MP G L Y+ +
Sbjct: 59 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQ 117
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSM 133
LN + +A + YL ++H DL NVL+ ++DFG+AKLL E++
Sbjct: 118 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
I +MA E + DV+S+G+ + E T G KP
Sbjct: 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 77/155 (49%), Gaps = 6/155 (3%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 108
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ L+ L F S V+H DLKP N+L++ L+DFG+A+ T T + T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 166
Query: 142 IGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTGK 175
+ Y APE + ST D++S G + E T +
Sbjct: 167 LWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 105/257 (40%), Gaps = 29/257 (11%)
Query: 1 MEVAVKVF-NLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
M VA+K N + F E M+ H +++K+I + E +++E G L
Sbjct: 39 MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGEL 97
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
+L LD+ + +++AL YL S +H D+ NVL+ N L D
Sbjct: 98 RSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGD 154
Query: 120 FGIAKLLIGEDQSMTQ-TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
FG+++ + ED + + ++ I +MAPE R ++ DV+ FG+ + E G KP
Sbjct: 155 FGLSRYM--EDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 212
Query: 178 TYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVES 237
N ++ + + LP+ C +++L C
Sbjct: 213 FQGVKNNDVIGRIENGERLPMPP--------------------NCPPTLYSLMTKCWAYD 252
Query: 238 PEQRINAKEIVTKLLKI 254
P +R E+ +L I
Sbjct: 253 PSRRPRFTELKAQLSTI 269
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 5/165 (3%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 73
+A K E +M S+ + ++ +++ C + L+++ MP G L Y+ +
Sbjct: 60 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQ 118
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSM 133
LN + +A + YL ++H DL NVL+ ++DFG+AKLL E++
Sbjct: 119 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 175
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
I +MA E + DV+S+G+ + E T G KP
Sbjct: 176 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 19/163 (11%)
Query: 31 HRNLIKVISSCSNEEFKALVL-EYMPHGSLEKYLYSSNC----------ILDIFQRLNIM 79
H N++ ++ +C+ +V+ E+ G+L YL S + F L +
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 80 I----DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ 135
I VA +E+L S IH DL N+LL + V + DFG+A+ + + + +
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 136 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
+ +MAPE + + DV+SFG++L E F+ G P
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 5/165 (3%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 73
+A K E +M S+ + ++ +++ C + L+++ MP G L Y+ +
Sbjct: 61 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQ 119
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSM 133
LN + +A + YL ++H DL NVL+ ++DFG+AKLL E++
Sbjct: 120 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 176
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
I +MA E + DV+S+G+ + E T G KP
Sbjct: 177 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 20/164 (12%)
Query: 31 HRNLIKVISSCSNEEFKALVL-EYMPHGSLEKYLYSSN--------CILDIFQRLNIM-- 79
H N++ ++ +C+ +V+ E+ G+L YL S D+++ +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 80 -----IDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMT 134
VA +E+L S IH DL N+LL + V + DFG+A+ + + +
Sbjct: 150 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 135 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
+ + +MAPE + + DV+SFG++L E F+ G P
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 5/165 (3%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 73
+A K E +M S+ + ++ +++ C + L+++ MP G L Y+ +
Sbjct: 66 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQ 124
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSM 133
LN + +A + YL ++H DL NVL+ ++DFG+AKLL E++
Sbjct: 125 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 181
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
I +MA E + DV+S+G+ + E T G KP
Sbjct: 182 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 77/155 (49%), Gaps = 6/155 (3%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 115
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ L+ L F S V+H DLKP N+L++ L+DFG+A+ T T + T
Sbjct: 116 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 173
Query: 142 IGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTGK 175
+ Y APE + ST D++S G + E T +
Sbjct: 174 LWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 75/175 (42%), Gaps = 9/175 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKAL--VLEYMPHGSLEKYLYSSN---CILDIFQRL 76
E +++ ++H N+++ + L V+EY G L + LD L
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 77 NIMIDVASALEYLHFGCSA--PVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMT 134
+M + AL+ H V+H DLKP NV LD L DFG+A++L D S
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-NHDTSFA 173
Query: 135 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLK 189
+T + T YM+PE + D++S G +L E P F E+ K
Sbjct: 174 KT-FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGK 227
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 20/164 (12%)
Query: 31 HRNLIKVISSCSNEEFKALVL-EYMPHGSLEKYLYSSN--------CILDIFQRLNIM-- 79
H N++ ++ +C+ +V+ E+ G+L YL S D+++ +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 80 -----IDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMT 134
VA +E+L S IH DL N+LL + V + DFG+A+ + + +
Sbjct: 150 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVR 206
Query: 135 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
+ + +MAPE + + DV+SFG++L E F+ G P
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 5/165 (3%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 73
+A K E +M S+ + ++ +++ C + L+++ MP G L Y+ +
Sbjct: 63 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQ 121
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSM 133
LN + +A + YL ++H DL NVL+ ++DFG+AKLL E++
Sbjct: 122 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 178
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
I +MA E + DV+S+G+ + E T G KP
Sbjct: 179 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 97/207 (46%), Gaps = 32/207 (15%)
Query: 48 ALVLEYMPHGSLEKYLYSSNCILD-IFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDN 106
++ +E+M GSL++ L + I + I +++I V L YL ++H D+KP N
Sbjct: 99 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLR--EKHKIMHRDVKPSN 154
Query: 107 VLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGI 166
+L++ L DFG++ LI SM + + T YM+PE + S D++S G+
Sbjct: 155 ILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSPERLQGTHYSVQSDIWSMGL 210
Query: 167 MLMETFTGKKPTYEFFNGEMT----LKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQC 222
L+E G+ P +G M L + VN+ P + + + S E FV K
Sbjct: 211 SLVEMAVGRYPIGS-GSGSMAIFELLDYIVNEPPP-----KLPSGVFSLEFQDFVNK--- 261
Query: 223 VSFVFNLAMACTVESPEQRINAKEIVT 249
C +++P +R + K+++
Sbjct: 262 ----------CLIKNPAERADLKQLMV 278
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 90/176 (51%), Gaps = 24/176 (13%)
Query: 13 GRAFKSFDVECEMMKSIRHRNLIKV------ISSCSNEEFKALVLEYMP---HGSLEKYL 63
G+AFK + E ++M+ + H N++++ +E + LVL+Y+P + Y
Sbjct: 56 GKAFK--NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYS 113
Query: 64 YSSNCILDIFQRLNIMIDVASALEYLH-FGCSAPVIHCDLKPDNVLLD-DNLVAYLSDFG 121
+ + I+ +L M + +L Y+H FG + H D+KP N+LLD D V L DFG
Sbjct: 114 RAKQTLPVIYVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFG 168
Query: 122 IAKLLIGEDQSMTQTQTLATIGYMAPE--YGREGRVSTNGDVYSFGIMLMETFTGK 175
AK L+ + +++ + + Y APE +G S+ DV+S G +L E G+
Sbjct: 169 SAKQLVRGEPNVS---XICSRYYRAPELIFGATDYTSSI-DVWSAGCVLAELLLGQ 220
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 77/155 (49%), Gaps = 6/155 (3%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 108
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ L+ L F S V+H DLKP N+L++ L+DFG+A+ T T + T
Sbjct: 109 LFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 166
Query: 142 IGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTGK 175
+ Y APE + ST D++S G + E T +
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 19/127 (14%)
Query: 51 LEYMPHGSLEKYLYSSNC-ILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
+E+ G+LE+++ LD L + + ++Y+H S +IH DLKP N+ L
Sbjct: 113 MEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFL 169
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPE------YGREGRVSTNGDVYS 163
D + DFG+ L + + +T++ T+ YM+PE YG+E D+Y+
Sbjct: 170 VDTKQVKIGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKE------VDLYA 220
Query: 164 FGIMLME 170
G++L E
Sbjct: 221 LGLILAE 227
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 88/188 (46%), Gaps = 16/188 (8%)
Query: 2 EVAVKVFN---LQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
EVAV++ + L K F E +MK + H N++K+ E+ LV+EY G
Sbjct: 41 EVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE 99
Query: 59 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
+ YL + + + R + SA++Y H ++H DLK +N+LLD ++ ++
Sbjct: 100 VFDYLVAHGRMKEKEARAKFR-QIVSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIA 155
Query: 119 DFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTGKKP 177
DFG + ++ T + Y APE + + DV+S G++L +G P
Sbjct: 156 DFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
Query: 178 TYEFFNGE 185
F+G+
Sbjct: 213 ----FDGQ 216
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY+P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQ 149
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+L+D ++DFG AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 20/164 (12%)
Query: 31 HRNLIKVISSCSNEEFKALVL-EYMPHGSLEKYLYSSN--------CILDIFQRLNIM-- 79
H N++ ++ +C+ +V+ E+ G+L YL S D+++ +
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 80 -----IDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMT 134
VA +E+L S IH DL N+LL + V + DFG+A+ + + +
Sbjct: 141 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 135 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
+ + +MAPE + + DV+SFG++L E F+ G P
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY+P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQ 149
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+L+D ++DFG AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 85/197 (43%), Gaps = 33/197 (16%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKA-------LVLEYMP 55
VAVKVF+ + F + + + + H N+ + I +E A LV+EY P
Sbjct: 39 VAVKVFSFANRQNFIN-EKNIYRVPLMEHDNIARFI--VGDERVTADGRMEYLLVMEYYP 95
Query: 56 HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCS-----APVI-HCDLKPDNVLL 109
+GSL KYL S D + V L YLH P I H DL NVL+
Sbjct: 96 NGSLXKYL--SLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLV 153
Query: 110 DDNLVAYLSDFGIAKLLIGE------DQSMTQTQTLATIGYMAPEYGREGRVSTNG---- 159
++ +SDFG++ L G ++ + TI YMAPE EG V+
Sbjct: 154 KNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEV-LEGAVNLRDXESA 212
Query: 160 ----DVYSFGIMLMETF 172
D+Y+ G++ E F
Sbjct: 213 LKQVDMYALGLIYWEIF 229
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 77/155 (49%), Gaps = 6/155 (3%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 108
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ L+ L F S V+H DLKP N+L++ L+DFG+A+ T T + T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 166
Query: 142 IGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTGK 175
+ Y APE + ST D++S G + E T +
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 77/155 (49%), Gaps = 6/155 (3%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 107
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ L+ L F S V+H DLKP N+L++ L+DFG+A+ T T + T
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 165
Query: 142 IGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTGK 175
+ Y APE + ST D++S G + E T +
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 20/164 (12%)
Query: 31 HRNLIKVISSCSNEEFKALVL-EYMPHGSLEKYLYSSN--------CILDIFQRLNIM-- 79
H N++ ++ +C+ +V+ E+ G+L YL S D+++ +
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 80 -----IDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMT 134
VA +E+L S IH DL N+LL + V + DFG+A+ + + +
Sbjct: 141 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 135 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
+ + +MAPE + + DV+SFG++L E F+ G P
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY+P G + +L + R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQ 150
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+L+D ++DFG AK + G + T
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 202
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 77/155 (49%), Gaps = 6/155 (3%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 108
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ L+ L F S V+H DLKP N+L++ L+DFG+A+ T T + T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 166
Query: 142 IGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTGK 175
+ Y APE + ST D++S G + E T +
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 77/155 (49%), Gaps = 6/155 (3%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 107
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ L+ L F S V+H DLKP N+L++ L+DFG+A+ T T + T
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 165
Query: 142 IGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTGK 175
+ Y APE + ST D++S G + E T +
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 101/206 (49%), Gaps = 34/206 (16%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVIS------SCSNEEFKALVLEYMP 55
EVA+K LQ R FK + E ++M+ ++H N++ + + +E F LVLEY+P
Sbjct: 66 EVAIKKV-LQDKR-FK--NRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP 121
Query: 56 HGSLEKYLYSSNCILDIFQRLNI------MIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
E +S + Q + + M + +L Y+H S + H D+KP N+LL
Sbjct: 122 ----ETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLL 174
Query: 110 D-DNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPE--YGREGRVSTNGDVYSFGI 166
D + V L DFG AK+LI + +++ + + Y APE +G +TN D++S G
Sbjct: 175 DPPSGVLKLIDFGSAKILIAGEPNVS---XICSRYYRAPELIFGATN-YTTNIDIWSTGC 230
Query: 167 MLMETFTGKKPTYEFFNGEMTLKHWV 192
++ E G+ F GE + V
Sbjct: 231 VMAELMQGQP----LFPGESGIDQLV 252
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY+P G + +L + R
Sbjct: 84 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQ 142
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+L+D ++DFG AK + G + T
Sbjct: 143 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 194
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 195 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 232
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 77/155 (49%), Gaps = 6/155 (3%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 107
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ L+ L F S V+H DLKP N+L++ L+DFG+A+ T T + T
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 165
Query: 142 IGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTGK 175
+ Y APE + ST D++S G + E T +
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 77/155 (49%), Gaps = 6/155 (3%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 108
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ L+ L F S V+H DLKP N+L++ L+DFG+A+ T T + T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 166
Query: 142 IGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTGK 175
+ Y APE + ST D++S G + E T +
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 9/150 (6%)
Query: 31 HRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 90
H N++K+ ++ LV+E + G L + + + + IM + SA+ ++H
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSET-EASYIMRKLVSAVSHMH 123
Query: 91 FGCSAPVIHCDLKPDNVLL---DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAP 147
V+H DLKP+N+L +DNL + DFG A+L ++Q + T+ Y AP
Sbjct: 124 ---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPL--KTPCFTLHYAAP 178
Query: 148 EYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
E + + D++S G++L +G+ P
Sbjct: 179 ELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 105/257 (40%), Gaps = 29/257 (11%)
Query: 1 MEVAVKVF-NLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
M VA+K N + F E M+ H +++K+I + E +++E G L
Sbjct: 39 MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGEL 97
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
+L LD+ + +++AL YL S +H D+ NVL+ N L D
Sbjct: 98 RSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGD 154
Query: 120 FGIAKLLIGEDQSMTQ-TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
FG+++ + ED + + ++ I +MAPE R ++ DV+ FG+ + E G KP
Sbjct: 155 FGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 212
Query: 178 TYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVES 237
N ++ + + LP+ C +++L C
Sbjct: 213 FQGVKNNDVIGRIENGERLPMPP--------------------NCPPTLYSLMTKCWAYD 252
Query: 238 PEQRINAKEIVTKLLKI 254
P +R E+ +L I
Sbjct: 253 PSRRPRFTELKAQLSTI 269
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 12/106 (11%)
Query: 79 MIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQT 138
M+ ++ LH+ +H D+KPDN+L+D N L+DFG + L + ED ++ +
Sbjct: 184 MVIAIDSVHQLHY------VHRDIKPDNILMDMNGHIRLADFG-SCLKLMEDGTVQSSVA 236
Query: 139 LATIGYMAPEY-----GREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
+ T Y++PE G +GR D +S G+ + E G+ P Y
Sbjct: 237 VGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFY 282
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 20/164 (12%)
Query: 31 HRNLIKVISSCSNEEFKALVL-EYMPHGSLEKYLYSSN--------CILDIFQRLNIM-- 79
H N++ ++ +C+ +V+ E+ G+L YL S D+++ +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 80 -----IDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMT 134
VA +E+L S IH DL N+LL + V + DFG+A+ + + +
Sbjct: 150 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 206
Query: 135 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
+ + +MAPE + + DV+SFG++L E F+ G P
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 77/155 (49%), Gaps = 6/155 (3%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 109
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ L+ L F S V+H DLKP N+L++ L+DFG+A+ T T + T
Sbjct: 110 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 167
Query: 142 IGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTGK 175
+ Y APE + ST D++S G + E T +
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 90/176 (51%), Gaps = 24/176 (13%)
Query: 13 GRAFKSFDVECEMMKSIRHRNLIKV------ISSCSNEEFKALVLEYMP---HGSLEKYL 63
G+AFK + E ++M+ + H N++++ +E + LVL+Y+P + Y
Sbjct: 56 GKAFK--NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 113
Query: 64 YSSNCILDIFQRLNIMIDVASALEYLH-FGCSAPVIHCDLKPDNVLLD-DNLVAYLSDFG 121
+ + I+ +L M + +L Y+H FG + H D+KP N+LLD D V L DFG
Sbjct: 114 RAKQTLPVIYVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFG 168
Query: 122 IAKLLIGEDQSMTQTQTLATIGYMAPE--YGREGRVSTNGDVYSFGIMLMETFTGK 175
AK L+ + +++ + + Y APE +G S+ DV+S G +L E G+
Sbjct: 169 SAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSI-DVWSAGCVLAELLLGQ 220
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 5/165 (3%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 73
+A K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 59 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ 117
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSM 133
LN + +A + YL ++H DL NVL+ ++DFG+AKLL E++
Sbjct: 118 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
I +MA E + DV+S+G+ + E T G KP
Sbjct: 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 6/159 (3%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
E ++++ RH L + + + V+EY G L +L + R
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGA 112
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLA 140
++ SALEYLH S V++ D+K +N++LD + ++DFG+ K I + +M
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM--KXFCG 167
Query: 141 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
T Y+APE + D + G+++ E G+ P Y
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 206
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 88/188 (46%), Gaps = 16/188 (8%)
Query: 2 EVAVKVFN---LQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
EVAV++ + L K F E +MK + H N++K+ E+ LV+EY G
Sbjct: 41 EVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE 99
Query: 59 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
+ YL + + + R + SA++Y H ++H DLK +N+LLD ++ ++
Sbjct: 100 VFDYLVAHGRMKEKEARAKFR-QIVSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIA 155
Query: 119 DFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTGKKP 177
DFG + ++ + + Y APE + + DV+S G++L +G P
Sbjct: 156 DFGFSNEFTFGNK---LDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
Query: 178 TYEFFNGE 185
F+G+
Sbjct: 213 ----FDGQ 216
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 77/155 (49%), Gaps = 6/155 (3%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 115
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ L+ L F S V+H DLKP N+L++ L+DFG+A+ T T + T
Sbjct: 116 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 173
Query: 142 IGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTGK 175
+ Y APE + ST D++S G + E T +
Sbjct: 174 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 20/164 (12%)
Query: 31 HRNLIKVISSCSNEEFKALVL-EYMPHGSLEKYLYSSN--------CILDIFQRLNIM-- 79
H N++ ++ +C+ +V+ E+ G+L YL S D+++ +
Sbjct: 127 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 186
Query: 80 -----IDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMT 134
VA +E+L S IH DL N+LL + V + DFG+A+ + + +
Sbjct: 187 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 243
Query: 135 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
+ + +MAPE + + DV+SFG++L E F+ G P
Sbjct: 244 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 287
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 90/176 (51%), Gaps = 24/176 (13%)
Query: 13 GRAFKSFDVECEMMKSIRHRNLIKV------ISSCSNEEFKALVLEYMP---HGSLEKYL 63
G+AFK + E ++M+ + H N++++ +E + LVL+Y+P + Y
Sbjct: 56 GKAFK--NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 113
Query: 64 YSSNCILDIFQRLNIMIDVASALEYLH-FGCSAPVIHCDLKPDNVLLD-DNLVAYLSDFG 121
+ + I+ +L M + +L Y+H FG + H D+KP N+LLD D V L DFG
Sbjct: 114 RAKQTLPVIYVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFG 168
Query: 122 IAKLLIGEDQSMTQTQTLATIGYMAPE--YGREGRVSTNGDVYSFGIMLMETFTGK 175
AK L+ + +++ + + Y APE +G S+ DV+S G +L E G+
Sbjct: 169 SAKQLVRGEPNVSY---ICSRYYRAPELIFGATDYTSSI-DVWSAGCVLAELLLGQ 220
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 74/166 (44%), Gaps = 25/166 (15%)
Query: 30 RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLY----------------------SSN 67
+H N++ ++ +C++ ++ EY +G L +L
Sbjct: 93 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDG 152
Query: 68 CILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 127
L++ L+ VA + +L S IH D+ NVLL + VA + DFG+A+ ++
Sbjct: 153 RPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 209
Query: 128 GEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 173
+ + + + +MAPE + + DV+S+GI+L E F+
Sbjct: 210 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 6/155 (3%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++K + H N++K++ E LV E++ H L+K++ +S + I L I
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS-ALTGIPLPL-IKSY 112
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ L+ L F S V+H DLKP N+L++ L+DFG+A+ T T + T
Sbjct: 113 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 170
Query: 142 IGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTGK 175
+ Y APE + ST D++S G + E T +
Sbjct: 171 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 6/159 (3%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
E ++++ RH L + + + V+EY G L +L + R
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGA 112
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLA 140
++ SALEYLH S V++ D+K +N++LD + ++DFG+ K I + +M
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM--KTFCG 167
Query: 141 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
T Y+APE + D + G+++ E G+ P Y
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 206
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 6/159 (3%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
E ++++ RH L + + + V+EY G L +L + R
Sbjct: 59 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGA 117
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLA 140
++ SALEYLH S V++ D+K +N++LD + ++DFG+ K I + +M
Sbjct: 118 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM--KXFCG 172
Query: 141 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
T Y+APE + D + G+++ E G+ P Y
Sbjct: 173 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 211
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 94/190 (49%), Gaps = 18/190 (9%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIR-HRNLIKVISSCSNEEFKALVLEYMPHGSLE 60
E AVK+ Q G E EM+ + HRN++++I E+ LV E M GS+
Sbjct: 40 EYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSIL 99
Query: 61 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLD-DNLVA--YL 117
+++ ++ + ++ DVASAL++LH + + H DLKP+N+L + N V+ +
Sbjct: 100 SHIHKRRHFNELEASV-VVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKI 155
Query: 118 SDFGIAK--LLIGEDQSMTQTQTLATIG---YMAPE----YGREGRV-STNGDVYSFGIM 167
DFG+ L G+ ++ + L G YMAPE + E + D++S G++
Sbjct: 156 CDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVI 215
Query: 168 LMETFTGKKP 177
L +G P
Sbjct: 216 LYILLSGYPP 225
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 20/164 (12%)
Query: 31 HRNLIKVISSCSNEEFKALVL-EYMPHGSLEKYLYSSN--------CILDIFQRLNIM-- 79
H N++ ++ +C+ +V+ E+ G+L YL S D+++ +
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEH 151
Query: 80 -----IDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMT 134
VA +E+L S IH DL N+LL + V + DFG+A+ + + +
Sbjct: 152 LICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 208
Query: 135 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
+ + +MAPE + + DV+SFG++L E F+ G P
Sbjct: 209 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 252
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY+P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+L+D ++DFG AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 22/191 (11%)
Query: 2 EVAVKVFN---LQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
EVAVK+ + L K F E +MK + H N++K+ E+ LV+EY G
Sbjct: 41 EVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE 99
Query: 59 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
+ YL + + + R + SA++Y H ++H DLK +N+LLD ++ ++
Sbjct: 100 VFDYLVAHGRMKEKEARAKFR-QIVSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIA 155
Query: 119 DFGIAKLLIGEDQSMTQTQTLATIG---YMAPEYGREGRV-STNGDVYSFGIMLMETFTG 174
DFG + ++ + A G Y APE + + DV+S G++L +G
Sbjct: 156 DFGFS------NEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
Query: 175 KKPTYEFFNGE 185
P F+G+
Sbjct: 210 SLP----FDGQ 216
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 6/159 (3%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
E ++++ RH L + + + V+EY G L +L + R
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGA 112
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLA 140
++ SALEYLH S V++ D+K +N++LD + ++DFG+ K I + +M
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM--KXFCG 167
Query: 141 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
T Y+APE + D + G+++ E G+ P Y
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 206
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY+P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+L+D ++DFG AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 111/267 (41%), Gaps = 35/267 (13%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
+ AVK L+ RA + + C + S R ++ + + + + +E + GSL +
Sbjct: 120 QCAVKKVRLEVFRAEEL--MACAGLTSPR---IVPLYGAVREGPWVNIFMELLEGGSLGQ 174
Query: 62 YLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLD-DNLVAYLSDF 120
+ C+ + + L + LEYLH S ++H D+K DNVLL D A L DF
Sbjct: 175 LVKEQGCLPED-RALYYLGQALEGLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDF 230
Query: 121 GIAKLLIGEDQS---MTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
G A L + +T T +MAPE DV+S M++ G P
Sbjct: 231 GHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 290
Query: 178 TYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVES 237
+FF G + LK ++ P+ + A L +Q + KE
Sbjct: 291 WTQFFRGPLCLK-IASEPPPVREIPPSCAPLTAQAIQEGLRKE----------------- 332
Query: 238 PEQRINAKEIVTKLLKIRDSLLRNVGG 264
P R++A E+ K+ + L+ VGG
Sbjct: 333 PIHRVSAAELGGKV----NRALQQVGG 355
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 5/165 (3%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 73
+A K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 59 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQ 117
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSM 133
LN + +A + YL ++H DL NVL+ ++DFG+AKLL E++
Sbjct: 118 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
I +MA E + DV+S+G+ + E T G KP
Sbjct: 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 6/159 (3%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
E ++++ RH L + + + V+EY G L +L + R
Sbjct: 57 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGA 115
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLA 140
++ SALEYLH S V++ D+K +N++LD + ++DFG+ K I + +M
Sbjct: 116 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM--KTFCG 170
Query: 141 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
T Y+APE + D + G+++ E G+ P Y
Sbjct: 171 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 209
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY+P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+L+D ++DFG AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 29/193 (15%)
Query: 2 EVAVKVFNLQ--CGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
E A + N + R + + E + + ++H N++++ S S E L+ + + G L
Sbjct: 38 EYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL 97
Query: 60 -----EKYLYS----SNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLD 110
+ YS S+CI I + A+ + H V+H +LKP+N+LL
Sbjct: 98 FEDIVAREYYSEADASHCIQQILE----------AVLHCH---QMGVVHRNLKPENLLLA 144
Query: 111 DNL---VAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIM 167
L L+DFG+A + GE Q+ T GY++PE R+ D+++ G++
Sbjct: 145 SKLKGAAVKLADFGLAIEVEGEQQAWFGFA--GTPGYLSPEVLRKDPYGKPVDLWACGVI 202
Query: 168 LMETFTGKKPTYE 180
L G P ++
Sbjct: 203 LYILLVGYPPFWD 215
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 6/159 (3%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
E ++++ RH L + + + V+EY G L +L + R
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGA 112
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLA 140
++ SALEYLH S V++ D+K +N++LD + ++DFG+ K I + +M
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM--KXFCG 167
Query: 141 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
T Y+APE + D + G+++ E G+ P Y
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 206
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 6/159 (3%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
E ++++ RH L + + + V+EY G L +L + R
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGA 112
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLA 140
++ SALEYLH S V++ D+K +N++LD + ++DFG+ K I + +M
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM--KTFCG 167
Query: 141 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
T Y+APE + D + G+++ E G+ P Y
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 206
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 79/175 (45%), Gaps = 30/175 (17%)
Query: 86 LEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYM 145
LE +H ++H DLKP N L+ D ++ L DFGIA + + S+ + + T+ YM
Sbjct: 121 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 179
Query: 146 APEYGREGRVS-TNG----------DVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVND 194
PE ++ S NG DV+S G +L GK P + N +++ H + D
Sbjct: 180 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-QISKLHAIID 238
Query: 195 WLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVT 249
P +E D + ++D+ V K C P+QRI+ E++
Sbjct: 239 --PNHEIEFPD---IPEKDLQDVLK------------CCLKRDPKQRISIPELLA 276
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY+P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+L+D ++DFG AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 5/165 (3%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 73
+A K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 59 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ 117
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSM 133
LN + +A + YL ++H DL NVL+ ++DFG+AKLL E++
Sbjct: 118 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
I +MA E + DV+S+G+ + E T G KP
Sbjct: 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 5/165 (3%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 73
+A K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 62 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ 120
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSM 133
LN + +A + YL ++H DL NVL+ ++DFG+AKLL E++
Sbjct: 121 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 177
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
I +MA E + DV+S+G+ + E T G KP
Sbjct: 178 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 5/165 (3%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 73
+A K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 62 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ 120
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSM 133
LN + +A + YL ++H DL NVL+ ++DFG+AKLL E++
Sbjct: 121 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 177
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
I +MA E + DV+S+G+ + E T G KP
Sbjct: 178 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY+P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+L+D ++DFG AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 5/165 (3%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 73
+A K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 69 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ 127
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSM 133
LN + +A + YL ++H DL NVL+ ++DFG+AKLL E++
Sbjct: 128 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 184
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
I +MA E + DV+S+G+ + E T G KP
Sbjct: 185 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 229
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 5/165 (3%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 73
+A K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 62 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ 120
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSM 133
LN + +A + YL ++H DL NVL+ ++DFG+AKLL E++
Sbjct: 121 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 177
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
I +MA E + DV+S+G+ + E T G KP
Sbjct: 178 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY+P G + +L + R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 150
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+L+D ++DFG AK + G + T
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 202
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 5/165 (3%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 73
+A K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 53 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ 111
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSM 133
LN + +A + YL ++H DL NVL+ ++DFG+AKLL E++
Sbjct: 112 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 168
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
I +MA E + DV+S+G+ + E T G KP
Sbjct: 169 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 213
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 79/175 (45%), Gaps = 30/175 (17%)
Query: 86 LEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYM 145
LE +H ++H DLKP N L+ D ++ L DFGIA + + S+ + + T+ YM
Sbjct: 117 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 175
Query: 146 APEYGREGRVS-TNG----------DVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVND 194
PE ++ S NG DV+S G +L GK P + N +++ H + D
Sbjct: 176 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-QISKLHAIID 234
Query: 195 WLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVT 249
P +E D + ++D+ V K C P+QRI+ E++
Sbjct: 235 --PNHEIEFPD---IPEKDLQDVLK------------CCLKRDPKQRISIPELLA 272
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY+P G + +L + R
Sbjct: 84 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 142
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+L+D ++DFG AK + G + T
Sbjct: 143 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 194
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 195 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 232
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 5/165 (3%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 73
+A K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 59 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ 117
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSM 133
LN + +A + YL ++H DL NVL+ ++DFG+AKLL E++
Sbjct: 118 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
I +MA E + DV+S+G+ + E T G KP
Sbjct: 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY+P G + +L + R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 150
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+L+D ++DFG AK + G + T
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE--- 204
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 205 --YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY+P G + +L + R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 150
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+L+D ++DFG AK + G + T
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 202
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY+P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+L+D ++DFG AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 105/257 (40%), Gaps = 29/257 (11%)
Query: 1 MEVAVKVF-NLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
M VA+K N + F E M+ H +++K+I + E +++E G L
Sbjct: 419 MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGEL 477
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
+L LD+ + +++AL YL S +H D+ NVL+ N L D
Sbjct: 478 RSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGD 534
Query: 120 FGIAKLLIGEDQSMTQ-TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
FG+++ + ED + + ++ I +MAPE R ++ DV+ FG+ + E G KP
Sbjct: 535 FGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 592
Query: 178 TYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVES 237
N ++ + + LP+ C +++L C
Sbjct: 593 FQGVKNNDVIGRIENGERLPMPP--------------------NCPPTLYSLMTKCWAYD 632
Query: 238 PEQRINAKEIVTKLLKI 254
P +R E+ +L I
Sbjct: 633 PSRRPRFTELKAQLSTI 649
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 5/165 (3%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 73
+A K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 61 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ 119
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSM 133
LN + +A + YL ++H DL NVL+ ++DFG+AKLL E++
Sbjct: 120 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 176
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
I +MA E + DV+S+G+ + E T G KP
Sbjct: 177 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 5/165 (3%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 73
+A K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 66 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ 124
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSM 133
LN + +A + YL ++H DL NVL+ ++DFG+AKLL E++
Sbjct: 125 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 181
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
I +MA E + DV+S+G+ + E T G KP
Sbjct: 182 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 5/165 (3%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 73
+A K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 66 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ 124
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSM 133
LN + +A + YL ++H DL NVL+ ++DFG+AKLL E++
Sbjct: 125 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 181
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
I +MA E + DV+S+G+ + E T G KP
Sbjct: 182 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY+P G + +L + R
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 170
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+L+D ++DFG AK + G + T
Sbjct: 171 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE--- 224
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 225 --YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 260
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY+P G + +L + R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 150
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+L+D ++DFG AK + G + T
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 202
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 5/165 (3%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 73
+A K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 56 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ 114
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSM 133
LN + +A + YL ++H DL NVL+ ++DFG+AKLL E++
Sbjct: 115 YLLNWCVQIAEGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 171
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
I +MA E + DV+S+G+ + E T G KP
Sbjct: 172 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 216
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 5/165 (3%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 73
+A K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 84 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ 142
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSM 133
LN + +A + YL ++H DL NVL+ ++DFG+AKLL E++
Sbjct: 143 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 199
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
I +MA E + DV+S+G+ + E T G KP
Sbjct: 200 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 244
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY+P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+L+D ++DFG AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE--- 203
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 204 --YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 5/165 (3%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 73
+A K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 65 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ 123
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSM 133
LN + +A + YL ++H DL NVL+ ++DFG+AKLL E++
Sbjct: 124 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 180
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
I +MA E + DV+S+G+ + E T G KP
Sbjct: 181 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 225
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 5/165 (3%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 73
+A K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 93 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ 151
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSM 133
LN + +A + YL ++H DL NVL+ ++DFG+AKLL E++
Sbjct: 152 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 208
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
I +MA E + DV+S+G+ + E T G KP
Sbjct: 209 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 253
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 77 NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQT 136
I+ ++ L+YLH S IH D+K NVLL + L+DFG+A L D + +
Sbjct: 120 TILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLT--DTQIKRN 174
Query: 137 QTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
+ T +MAPE ++ D++S GI +E G+ P
Sbjct: 175 XFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPP 215
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 79/175 (45%), Gaps = 30/175 (17%)
Query: 86 LEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYM 145
LE +H ++H DLKP N L+ D ++ L DFGIA + + S+ + + T+ YM
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 195
Query: 146 APEYGREGRVS-TNG----------DVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVND 194
PE ++ S NG DV+S G +L GK P + N +++ H + D
Sbjct: 196 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-QISKLHAIID 254
Query: 195 WLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVT 249
P +E D + ++D+ V K C P+QRI+ E++
Sbjct: 255 --PNHEIEFPD---IPEKDLQDVLK------------CCLKRDPKQRISIPELLA 292
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 26/189 (13%)
Query: 6 KVFNLQC--GRAFK----SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
K+F ++C +A K S + E +++ I+H N++ + + LV++ + G L
Sbjct: 48 KLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGEL 107
Query: 60 -----EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL---DD 111
EK Y+ + ++ V A+ YLH ++H DLKP+N+L D+
Sbjct: 108 FDRIVEKGFYTEKDASTLIRQ------VLDAVYYLH---RMGIVHRDLKPENLLYYSQDE 158
Query: 112 NLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMET 171
+SDFG++K+ E + + T GY+APE + S D +S G++
Sbjct: 159 ESKIMISDFGLSKM---EGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYIL 215
Query: 172 FTGKKPTYE 180
G P Y+
Sbjct: 216 LCGYPPFYD 224
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 79/175 (45%), Gaps = 30/175 (17%)
Query: 86 LEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYM 145
LE +H ++H DLKP N L+ D ++ L DFGIA + + S+ + + T+ YM
Sbjct: 118 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 176
Query: 146 APEYGREGRVS-TNG----------DVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVND 194
PE ++ S NG DV+S G +L GK P + N +++ H + D
Sbjct: 177 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-QISKLHAIID 235
Query: 195 WLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVT 249
P +E D + ++D+ V K C P+QRI+ E++
Sbjct: 236 --PNHEIEFPD---IPEKDLQDVLK------------CCLKRDPKQRISIPELLA 273
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 7/103 (6%)
Query: 77 NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQT 136
++M + L++LH S V+H DLKP N+L+ + L+DFG+A++ + M T
Sbjct: 124 DMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ---MALT 177
Query: 137 QTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
+ T+ Y APE + +T D++S G + E F +KP +
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLF 219
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 86/191 (45%), Gaps = 22/191 (11%)
Query: 2 EVAVKVFNLQC--GRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
EVA+K+ + + + E +MK + H N++K+ E+ L++EY G +
Sbjct: 39 EVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEV 98
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
YL + + + R + SA++Y H ++H DLK +N+LLD ++ ++D
Sbjct: 99 FDYLVAHGRMKEKEARSKFR-QIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIAD 154
Query: 120 FGIAKLLIGEDQSMTQTQTLATI----GYMAPEYGREGRV-STNGDVYSFGIMLMETFTG 174
FG + T L T Y APE + + DV+S G++L +G
Sbjct: 155 FGFS-------NEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 207
Query: 175 KKPTYEFFNGE 185
P F+G+
Sbjct: 208 SLP----FDGQ 214
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Query: 48 ALVLEYMPHGSLEKYLYSSNCILD-IFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDN 106
++ +E+M GSL++ L + I + I +++I V L YL ++H D+KP N
Sbjct: 90 SICMEHMDGGSLDQVLKEAKRIPEEILGKVSIA--VLRGLAYLREKHQ--IMHRDVKPSN 145
Query: 107 VLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGI 166
+L++ L DFG++ LI SM + + T YMAPE + S D++S G+
Sbjct: 146 ILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMAPERLQGTHYSVQSDIWSMGL 201
Query: 167 MLMETFTGKKP 177
L+E G+ P
Sbjct: 202 SLVELAVGRYP 212
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 26/166 (15%)
Query: 26 MKSIRHRNLIKVISSCS----NEEFK-ALVLEYMPHGSLEKYL-------YSSNCILDIF 73
+++ H N++++ C+ + E K LV E++ L YL + I D+
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDM- 125
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSM 133
M + L++LH S V+H DLKP N+L+ + L+DFG+A++ + M
Sbjct: 126 -----MFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ---M 174
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
T + T+ Y APE + +T D++S G + E F +KP +
Sbjct: 175 ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLF 219
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 5/165 (3%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 73
+A K E +M S+ + ++ +++ C + L+++ MP G L Y+ +
Sbjct: 61 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQ 119
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSM 133
LN + +A + YL ++H DL NVL+ ++DFG AKLL E++
Sbjct: 120 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 176
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
I +MA E + DV+S+G+ + E T G KP
Sbjct: 177 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 92/190 (48%), Gaps = 18/190 (9%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIR-HRNLIKVISSCSNEEFKALVLEYMPHGSLE 60
E AVK+ Q G E EM+ + HRN++++I E+ LV E M GS+
Sbjct: 40 EYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSIL 99
Query: 61 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLD-DNLVAYLS- 118
+++ ++ + ++ DVASAL++LH + + H DLKP+N+L + N V+ +
Sbjct: 100 SHIHKRRHFNELEASV-VVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKI 155
Query: 119 ---DFGIAKLLIGEDQSMTQTQTLATIG---YMAPE----YGREGRV-STNGDVYSFGIM 167
D G L G+ ++ + L G YMAPE + E + D++S G++
Sbjct: 156 CDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVI 215
Query: 168 LMETFTGKKP 177
L +G P
Sbjct: 216 LYILLSGYPP 225
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 10/185 (5%)
Query: 1 MEVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLE 60
M+V K ++ + E +++ ++H ++ +I + L+LEY+ G L
Sbjct: 50 MKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELF 109
Query: 61 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
L ++ + +++ AL +LH +I+ DLKP+N++L+ L+DF
Sbjct: 110 MQLEREGIFMEDTACF-YLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDF 165
Query: 121 GIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYE 180
G+ K I D ++T TI YMAPE + D +S G ++ + TG P
Sbjct: 166 GLCKESI-HDGTVTHX-FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP--- 220
Query: 181 FFNGE 185
F GE
Sbjct: 221 -FTGE 224
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 5/165 (3%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 73
+A K E +M S+ + ++ +++ C + L+++ MP G L Y+ +
Sbjct: 61 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQ 119
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSM 133
LN + +A + YL ++H DL NVL+ ++DFG AKLL E++
Sbjct: 120 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 176
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
I +MA E + DV+S+G+ + E T G KP
Sbjct: 177 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 16/155 (10%)
Query: 29 IRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 88
+ RN +K +++ + + +EY +G+L ++S N + + + AL Y
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSY 131
Query: 89 LHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK-------LLIGEDQSMTQ-----T 136
+H S +IH DLKP N+ +D++ + DFG+AK +L + Q++ T
Sbjct: 132 IH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLT 188
Query: 137 QTLATIGYMAPE-YGREGRVSTNGDVYSFGIMLME 170
+ T Y+A E G + D+YS GI+ E
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFE 223
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 5/165 (3%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 73
+A K E +M S+ + ++ +++ C + L+++ MP G L Y+ +
Sbjct: 63 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQ 121
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSM 133
LN + +A + YL ++H DL NVL+ ++DFG AKLL E++
Sbjct: 122 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 178
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
I +MA E + DV+S+G+ + E T G KP
Sbjct: 179 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Query: 48 ALVLEYMPHGSLEKYLYSSNCILD-IFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDN 106
++ +E+M GSL++ L + I + I +++I V L YL ++H D+KP N
Sbjct: 107 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLRE--KHKIMHRDVKPSN 162
Query: 107 VLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGI 166
+L++ L DFG++ LI SM + + T YM+PE + S D++S G+
Sbjct: 163 ILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSPERLQGTHYSVQSDIWSMGL 218
Query: 167 MLMETFTGKKP 177
L+E G+ P
Sbjct: 219 SLVEMAVGRYP 229
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 7/103 (6%)
Query: 77 NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQT 136
++M + L++LH S V+H DLKP N+L+ + L+DFG+A++ + M T
Sbjct: 124 DMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ---MALT 177
Query: 137 QTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
+ T+ Y APE + +T D++S G + E F +KP +
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLF 219
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 79/175 (45%), Gaps = 30/175 (17%)
Query: 86 LEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYM 145
LE +H ++H DLKP N L+ D ++ L DFGIA + + S+ + + T+ YM
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 146 APEYGREGRVS-TNG----------DVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVND 194
PE ++ S NG DV+S G +L GK P + N +++ H + D
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-QISKLHAIID 282
Query: 195 WLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVT 249
P +E D + ++D+ V K C P+QRI+ E++
Sbjct: 283 --PNHEIEFPD---IPEKDLQDVLK------------CCLKRDPKQRISIPELLA 320
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E + +++ L+K+ S + +VLEY P G + +L + R
Sbjct: 92 EKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARF-YAAQ 150
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+L+D ++DFG AK + G + T
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE--- 204
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 205 --YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 75/175 (42%), Gaps = 9/175 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKAL--VLEYMPHGSLEKYLYSSN---CILDIFQRL 76
E +++ ++H N+++ + L V+EY G L + LD L
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 77 NIMIDVASALEYLHFGCSA--PVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMT 134
+M + AL+ H V+H DLKP NV LD L DFG+A++L D+
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-NHDEDFA 173
Query: 135 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLK 189
+ + + T YM+PE + D++S G +L E P F E+ K
Sbjct: 174 K-EFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGK 227
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 105/257 (40%), Gaps = 29/257 (11%)
Query: 1 MEVAVKVF-NLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
+ VA+K N + F E M+ H +++K+I + E +++E G L
Sbjct: 39 LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGEL 97
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
+L LD+ + +++AL YL S +H D+ NVL+ N L D
Sbjct: 98 RSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGD 154
Query: 120 FGIAKLLIGEDQSMTQ-TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
FG+++ + ED + + ++ I +MAPE R ++ DV+ FG+ + E G KP
Sbjct: 155 FGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 212
Query: 178 TYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVES 237
N ++ + + LP+ C +++L C
Sbjct: 213 FQGVKNNDVIGRIENGERLPMPP--------------------NCPPTLYSLMTKCWAYD 252
Query: 238 PEQRINAKEIVTKLLKI 254
P +R E+ +L I
Sbjct: 253 PSRRPRFTELKAQLSTI 269
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 99/240 (41%), Gaps = 28/240 (11%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 76
+ F E M+ H +++K+I + E +++E G L +L LD+ +
Sbjct: 58 EKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLI 116
Query: 77 NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ- 135
+++AL YL S +H D+ NVL+ N L DFG+++ + ED + +
Sbjct: 117 LYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKA 171
Query: 136 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTYEFFNGEMTLKHWVND 194
++ I +MAPE R ++ DV+ FG+ + E G KP N ++ + +
Sbjct: 172 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 231
Query: 195 WLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI 254
LP+ C +++L C P +R E+ +L I
Sbjct: 232 RLPMPP--------------------NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 271
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 105/257 (40%), Gaps = 29/257 (11%)
Query: 1 MEVAVKVF-NLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
+ VA+K N + F E M+ H +++K+I + E +++E G L
Sbjct: 42 LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGEL 100
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
+L LD+ + +++AL YL S +H D+ NVL+ N L D
Sbjct: 101 RSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGD 157
Query: 120 FGIAKLLIGEDQSMTQ-TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
FG+++ + ED + + ++ I +MAPE R ++ DV+ FG+ + E G KP
Sbjct: 158 FGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 215
Query: 178 TYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVES 237
N ++ + + LP+ C +++L C
Sbjct: 216 FQGVKNNDVIGRIENGERLPMPP--------------------NCPPTLYSLMTKCWAYD 255
Query: 238 PEQRINAKEIVTKLLKI 254
P +R E+ +L I
Sbjct: 256 PSRRPRFTELKAQLSTI 272
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 74/175 (42%), Gaps = 9/175 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKAL--VLEYMPHGSLEKYLYSSN---CILDIFQRL 76
E +++ ++H N+++ + L V+EY G L + LD L
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 77 NIMIDVASALEYLHFGCSA--PVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMT 134
+M + AL+ H V+H DLKP NV LD L DFG+A++L D S
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-NHDTSFA 173
Query: 135 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLK 189
+ + T YM+PE + D++S G +L E P F E+ K
Sbjct: 174 KA-FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGK 227
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 6/179 (3%)
Query: 1 MEVAVKVFNLQCG-RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
+ VA+KV +A K E +M + + +++ C + LV + MP+G L
Sbjct: 47 IPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLTSTVQ-LVTQLMPYGCL 105
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
++ + L LN + +A + YL ++H DL NVL+ ++D
Sbjct: 106 LDHVRENRGRLGSQDLLNWCMQIAKGMSYLE---DVRLVHRDLAARNVLVKSPNHVKITD 162
Query: 120 FGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
FG+A+LL ++ I +MA E R + DV+S+G+ + E T G KP
Sbjct: 163 FGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKP 221
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 79/175 (45%), Gaps = 30/175 (17%)
Query: 86 LEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYM 145
LE +H ++H DLKP N L+ D ++ L DFGIA + + S+ + + T+ YM
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 146 APEYGREGRVS-TNG----------DVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVND 194
PE ++ S NG DV+S G +L GK P + N +++ H + D
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-QISKLHAIID 282
Query: 195 WLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVT 249
P +E D + ++D+ V K C P+QRI+ E++
Sbjct: 283 --PNHEIEFPD---IPEKDLQDVLK------------CCLKRDPKQRISIPELLA 320
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 77/155 (49%), Gaps = 6/155 (3%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 109
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ L+ L F S V+H DLKP+N+L++ L+DFG+A+ T + T
Sbjct: 110 LFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 167
Query: 142 IGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTGK 175
+ Y APE + ST D++S G + E T +
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+++D ++DFG+AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPE--- 203
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 204 --YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 77/155 (49%), Gaps = 6/155 (3%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 110
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ L+ L F S V+H DLKP+N+L++ L+DFG+A+ T + T
Sbjct: 111 LFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 168
Query: 142 IGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTGK 175
+ Y APE + ST D++S G + E T +
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 105/257 (40%), Gaps = 29/257 (11%)
Query: 1 MEVAVKVF-NLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
+ VA+K N + F E M+ H +++K+I + E +++E G L
Sbjct: 44 LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGEL 102
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
+L LD+ + +++AL YL S +H D+ NVL+ N L D
Sbjct: 103 RSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGD 159
Query: 120 FGIAKLLIGEDQSMTQ-TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
FG+++ + ED + + ++ I +MAPE R ++ DV+ FG+ + E G KP
Sbjct: 160 FGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 217
Query: 178 TYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVES 237
N ++ + + LP+ C +++L C
Sbjct: 218 FQGVKNNDVIGRIENGERLPMPP--------------------NCPPTLYSLMTKCWAYD 257
Query: 238 PEQRINAKEIVTKLLKI 254
P +R E+ +L I
Sbjct: 258 PSRRPRFTELKAQLSTI 274
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQ 149
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+++D ++DFG AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE--- 203
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 204 --YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 105/257 (40%), Gaps = 29/257 (11%)
Query: 1 MEVAVKVF-NLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
+ VA+K N + F E M+ H +++K+I + E +++E G L
Sbjct: 67 LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGEL 125
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
+L LD+ + +++AL YL S +H D+ NVL+ N L D
Sbjct: 126 RSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGD 182
Query: 120 FGIAKLLIGEDQSMTQ-TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
FG+++ + ED + + ++ I +MAPE R ++ DV+ FG+ + E G KP
Sbjct: 183 FGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 240
Query: 178 TYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVES 237
N ++ + + LP+ C +++L C
Sbjct: 241 FQGVKNNDVIGRIENGERLPMPP--------------------NCPPTLYSLMTKCWAYD 280
Query: 238 PEQRINAKEIVTKLLKI 254
P +R E+ +L I
Sbjct: 281 PSRRPRFTELKAQLSTI 297
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 99/240 (41%), Gaps = 28/240 (11%)
Query: 17 KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL 76
+ F E M+ H +++K+I + E +++E G L +L LD+ +
Sbjct: 53 EKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLI 111
Query: 77 NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQ- 135
+++AL YL S +H D+ NVL+ N L DFG+++ + ED + +
Sbjct: 112 LYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKA 166
Query: 136 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTYEFFNGEMTLKHWVND 194
++ I +MAPE R ++ DV+ FG+ + E G KP N ++ + +
Sbjct: 167 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 226
Query: 195 WLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI 254
LP+ C +++L C P +R E+ +L I
Sbjct: 227 RLPMPP--------------------NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 266
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 88/190 (46%), Gaps = 20/190 (10%)
Query: 2 EVAVKVFNLQC--GRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
EVA+K+ + + + E +MK + H N++K+ E+ L++EY G +
Sbjct: 42 EVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEV 101
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
YL + + + R + SA++Y H ++H DLK +N+LLD ++ ++D
Sbjct: 102 FDYLVAHGRMKEKEARSKFR-QIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIAD 157
Query: 120 FGIAKLLIGEDQSMTQTQTLATIG---YMAPEYGREGRV-STNGDVYSFGIMLMETFTGK 175
FG + ++ + A G Y APE + + DV+S G++L +G
Sbjct: 158 FGFS------NEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS 211
Query: 176 KPTYEFFNGE 185
P F+G+
Sbjct: 212 LP----FDGQ 217
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+++D ++DFG+AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPE--- 203
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 204 --YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 30/191 (15%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSI--RHRNLIKVISSCSNEEFKA----LVLEYMP 55
EVAVK+F+ R +S+ E E+ +++ RH N++ I++ + + LV +Y
Sbjct: 28 EVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 84
Query: 56 HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC----SAPVI-HCDLKPDNVLLD 110
HGSL YL ++ + + + AS L +LH P I H DLK N+L+
Sbjct: 85 HGSLFDYLNRYTVTVEGM--IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK 142
Query: 111 DNLVAYLSDFGIAKLLIGEDQS-----MTQTQTLATIGYMAPEY------GREGRVSTNG 159
N ++D G+A + D + + + T YMAPE +
Sbjct: 143 KNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRA 199
Query: 160 DVYSFGIMLME 170
D+Y+ G++ E
Sbjct: 200 DIYAMGLVFWE 210
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 84/185 (45%), Gaps = 18/185 (9%)
Query: 1 MEVAVKVFNLQC-------GRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEY 53
+EVA+K+ + + R + C++ +H +++++ + + + LVLE
Sbjct: 37 LEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL----KHPSILELYNYFEDSNYVYLVLEM 92
Query: 54 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNL 113
+G + +YL + + + M + + + YLH S ++H DL N+LL N+
Sbjct: 93 CHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNM 149
Query: 114 VAYLSDFGIA-KLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETF 172
++DFG+A +L + ++ T T Y++PE DV+S G M
Sbjct: 150 NIKIADFGLATQLKMPHEKHYT---LCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLL 206
Query: 173 TGKKP 177
G+ P
Sbjct: 207 IGRPP 211
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 98/211 (46%), Gaps = 34/211 (16%)
Query: 48 ALVLEYMPHGSLEKYLYSSNCILD-IFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDN 106
++ +E+M GSL++ L + I + I +++I V L YL ++H D+KP N
Sbjct: 80 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLRE--KHKIMHRDVKPSN 135
Query: 107 VLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGI 166
+L++ L DFG++ LI SM + + T YM+PE + S D++S G+
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSPERLQGTHYSVQSDIWSMGL 191
Query: 167 MLMETFTGKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKE---QCV 223
L+E G+ P E + P++ E++D ++ E +
Sbjct: 192 SLVEMAVGRYPIPPPDAKE-------DSRPPMAIFELLD----------YIVNEPPPKLP 234
Query: 224 SFVFNLAM-----ACTVESPEQRINAKEIVT 249
S VF+L C +++P +R + K+++
Sbjct: 235 SGVFSLEFQDFVNKCLIKNPAERADLKQLMV 265
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Query: 48 ALVLEYMPHGSLEKYLYSSNCILD-IFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDN 106
++ +E+M GSL++ L + I + I +++I V L YL ++H D+KP N
Sbjct: 80 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLRE--KHKIMHRDVKPSN 135
Query: 107 VLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGI 166
+L++ L DFG++ LI SM + + T YM+PE + S D++S G+
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSPERLQGTHYSVQSDIWSMGL 191
Query: 167 MLMETFTGKKP 177
L+E G+ P
Sbjct: 192 SLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Query: 48 ALVLEYMPHGSLEKYLYSSNCILD-IFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDN 106
++ +E+M GSL++ L + I + I +++I V L YL ++H D+KP N
Sbjct: 80 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLRE--KHKIMHRDVKPSN 135
Query: 107 VLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGI 166
+L++ L DFG++ LI SM + + T YM+PE + S D++S G+
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSPERLQGTHYSVQSDIWSMGL 191
Query: 167 MLMETFTGKKP 177
L+E G+ P
Sbjct: 192 SLVEMAVGRYP 202
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 14/181 (7%)
Query: 3 VAVKVFNLQ----CGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
VAVK+ +++ C K E + K + H N++K + L LEY G
Sbjct: 34 VAVKIVDMKRAVDCPENIKK---EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 59 LEKYLYSSNCILDI-FQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYL 117
L + + + QR + + + YLH + H D+KP+N+LLD+ +
Sbjct: 91 LFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKI 145
Query: 118 SDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKK 176
SDFG+A + ++ + T+ Y+APE + DV+S GI+L G+
Sbjct: 146 SDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 177 P 177
P
Sbjct: 206 P 206
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 14/181 (7%)
Query: 3 VAVKVFNLQ----CGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
VAVK+ +++ C K E + K + H N++K + L LEY G
Sbjct: 35 VAVKIVDMKRAVDCPENIKK---EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91
Query: 59 LEKYLYSSNCILDI-FQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYL 117
L + + + QR + + + YLH + H D+KP+N+LLD+ +
Sbjct: 92 LFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKI 146
Query: 118 SDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKK 176
SDFG+A + ++ + T+ Y+APE + DV+S GI+L G+
Sbjct: 147 SDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
Query: 177 P 177
P
Sbjct: 207 P 207
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 30/191 (15%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSI--RHRNLIKVISSCSNEEFKA----LVLEYMP 55
EVAVK+F+ R +S+ E E+ +++ RH N++ I++ + + LV +Y
Sbjct: 54 EVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 110
Query: 56 HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC----SAPVI-HCDLKPDNVLLD 110
HGSL YL ++ + + + AS L +LH P I H DLK N+L+
Sbjct: 111 HGSLFDYLNRYTVTVEGM--IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK 168
Query: 111 DNLVAYLSDFGIAKLLIGEDQS-----MTQTQTLATIGYMAPEY------GREGRVSTNG 159
N ++D G+A + D + + + T YMAPE +
Sbjct: 169 KNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRA 225
Query: 160 DVYSFGIMLME 170
D+Y+ G++ E
Sbjct: 226 DIYAMGLVFWE 236
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 30/191 (15%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSI--RHRNLIKVISSCSNEEFKA----LVLEYMP 55
EVAVK+F+ R +S+ E E+ +++ RH N++ I++ + + LV +Y
Sbjct: 29 EVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 85
Query: 56 HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC----SAPVI-HCDLKPDNVLLD 110
HGSL YL ++ + + + AS L +LH P I H DLK N+L+
Sbjct: 86 HGSLFDYLNRYTVTVEGM--IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK 143
Query: 111 DNLVAYLSDFGIAKLLIGEDQS-----MTQTQTLATIGYMAPEY------GREGRVSTNG 159
N ++D G+A + D + + + T YMAPE +
Sbjct: 144 KNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRA 200
Query: 160 DVYSFGIMLME 170
D+Y+ G++ E
Sbjct: 201 DIYAMGLVFWE 211
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Query: 48 ALVLEYMPHGSLEKYLYSSNCILD-IFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDN 106
++ +E+M GSL++ L + I + I +++I V L YL ++H D+KP N
Sbjct: 142 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLRE--KHKIMHRDVKPSN 197
Query: 107 VLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGI 166
+L++ L DFG++ LI SM + + T YM+PE + S D++S G+
Sbjct: 198 ILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSPERLQGTHYSVQSDIWSMGL 253
Query: 167 MLMETFTGKKP 177
L+E G+ P
Sbjct: 254 SLVEMAVGRYP 264
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 83/186 (44%), Gaps = 14/186 (7%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKY 62
A KV + + + + VE +++ S H N++K++ + E +++E+ G+++
Sbjct: 65 AAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAV 124
Query: 63 LYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGI 122
+ L Q + AL YLH +IH DLK N+L + L+DFG+
Sbjct: 125 MLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGV 181
Query: 123 AKLLIGEDQSMTQTQT--LATIGYMAPEY-----GREGRVSTNGDVYSFGIMLMETFTGK 175
+ ++ Q + + T +MAPE ++ DV+S GI L+E +
Sbjct: 182 S----AKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE 237
Query: 176 KPTYEF 181
P +E
Sbjct: 238 PPHHEL 243
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Query: 48 ALVLEYMPHGSLEKYLYSSNCILD-IFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDN 106
++ +E+M GSL++ L + I + I +++I V L YL ++H D+KP N
Sbjct: 80 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLRE--KHKIMHRDVKPSN 135
Query: 107 VLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGI 166
+L++ L DFG++ LI SM + + T YM+PE + S D++S G+
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSPERLQGTHYSVQSDIWSMGL 191
Query: 167 MLMETFTGKKP 177
L+E G+ P
Sbjct: 192 SLVEMAVGRYP 202
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 85/196 (43%), Gaps = 17/196 (8%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKY 62
A KV + + + + VE +++ S H N++K++ + E +++E+ G+++
Sbjct: 38 AAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAV 97
Query: 63 LYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGI 122
+ L Q + AL YLH +IH DLK N+L + L+DFG+
Sbjct: 98 MLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGV 154
Query: 123 AKLLIGEDQSMTQTQT----LATIGYMAPEY-----GREGRVSTNGDVYSFGIMLMETFT 173
+ + T Q + T +MAPE ++ DV+S GI L+E
Sbjct: 155 SA-----KNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAE 209
Query: 174 GKKPTYEFFNGEMTLK 189
+ P +E + LK
Sbjct: 210 IEPPHHELNPMRVLLK 225
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 83/186 (44%), Gaps = 14/186 (7%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKY 62
A KV + + + + VE +++ S H N++K++ + E +++E+ G+++
Sbjct: 65 AAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAV 124
Query: 63 LYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGI 122
+ L Q + AL YLH +IH DLK N+L + L+DFG+
Sbjct: 125 MLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGV 181
Query: 123 AKLLIGEDQSMTQTQT--LATIGYMAPEY-----GREGRVSTNGDVYSFGIMLMETFTGK 175
+ ++ Q + + T +MAPE ++ DV+S GI L+E +
Sbjct: 182 S----AKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE 237
Query: 176 KPTYEF 181
P +E
Sbjct: 238 PPHHEL 243
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 83/186 (44%), Gaps = 14/186 (7%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKY 62
A KV + + + + VE +++ S H N++K++ + E +++E+ G+++
Sbjct: 65 AAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAV 124
Query: 63 LYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGI 122
+ L Q + AL YLH +IH DLK N+L + L+DFG+
Sbjct: 125 MLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGV 181
Query: 123 AKLLIGEDQSMTQTQT--LATIGYMAPEY-----GREGRVSTNGDVYSFGIMLMETFTGK 175
+ ++ Q + + T +MAPE ++ DV+S GI L+E +
Sbjct: 182 S----AKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE 237
Query: 176 KPTYEF 181
P +E
Sbjct: 238 PPHHEL 243
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+++D ++DFG AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 30/191 (15%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSI--RHRNLIKVISSCSNEEFKA----LVLEYMP 55
EVAVK+F+ R +S+ E E+ +++ RH N++ I++ + + LV +Y
Sbjct: 34 EVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 90
Query: 56 HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC----SAPVI-HCDLKPDNVLLD 110
HGSL YL ++ + + + AS L +LH P I H DLK N+L+
Sbjct: 91 HGSLFDYLNRYTVTVEGM--IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK 148
Query: 111 DNLVAYLSDFGIAKLLIGEDQS-----MTQTQTLATIGYMAPEY------GREGRVSTNG 159
N ++D G+A + D + + + T YMAPE +
Sbjct: 149 KNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRA 205
Query: 160 DVYSFGIMLME 170
D+Y+ G++ E
Sbjct: 206 DIYAMGLVFWE 216
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 108
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ L+ L F S V+H DLKP N+L++ L+DFG+A+ T + T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 166
Query: 142 IGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTGK 175
+ Y APE + ST D++S G + E T +
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 88/192 (45%), Gaps = 10/192 (5%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKY 62
A KV + + + VE E++ + H ++K++ + ++ +++E+ P G+++
Sbjct: 39 AAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAI 98
Query: 63 LYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGI 122
+ + L Q I + LE L+F S +IH DLK NVL+ L+DFG+
Sbjct: 99 MLELDRGLTEPQ---IQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGV 155
Query: 123 AKLLIGEDQSMTQTQTLATIGYMAPEY-----GREGRVSTNGDVYSFGIMLMETFTGKKP 177
+ + Q + + T +MAPE ++ D++S GI L+E + P
Sbjct: 156 SAKNLKTLQK--RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 213
Query: 178 TYEFFNGEMTLK 189
+E + LK
Sbjct: 214 HHELNPMRVLLK 225
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 30/191 (15%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSI--RHRNLIKVISSCSNEEFKA----LVLEYMP 55
EVAVK+F+ R +S+ E E+ +++ RH N++ I++ + + LV +Y
Sbjct: 31 EVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 87
Query: 56 HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC----SAPVI-HCDLKPDNVLLD 110
HGSL YL ++ + + + AS L +LH P I H DLK N+L+
Sbjct: 88 HGSLFDYLNRYTVTVEGM--IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK 145
Query: 111 DNLVAYLSDFGIAKLLIGEDQS-----MTQTQTLATIGYMAPEY------GREGRVSTNG 159
N ++D G+A + D + + + T YMAPE +
Sbjct: 146 KNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRA 202
Query: 160 DVYSFGIMLME 170
D+Y+ G++ E
Sbjct: 203 DIYAMGLVFWE 213
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 88/192 (45%), Gaps = 10/192 (5%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKY 62
A KV + + + VE E++ + H ++K++ + ++ +++E+ P G+++
Sbjct: 47 AAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAI 106
Query: 63 LYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGI 122
+ + L Q I + LE L+F S +IH DLK NVL+ L+DFG+
Sbjct: 107 MLELDRGLTEPQ---IQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGV 163
Query: 123 AKLLIGEDQSMTQTQTLATIGYMAPEY-----GREGRVSTNGDVYSFGIMLMETFTGKKP 177
+ + Q + + T +MAPE ++ D++S GI L+E + P
Sbjct: 164 SAKNLKTLQK--RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 221
Query: 178 TYEFFNGEMTLK 189
+E + LK
Sbjct: 222 HHELNPMRVLLK 233
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 108
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ L+ L F S V+H DLKP N+L++ L+DFG+A+ T + T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 166
Query: 142 IGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTGK 175
+ Y APE + ST D++S G + E T +
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 107
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ L+ L F S V+H DLKP N+L++ L+DFG+A+ T + T
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 165
Query: 142 IGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTGK 175
+ Y APE + ST D++S G + E T +
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 30/191 (15%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSI--RHRNLIKVISSCSNEEFKA----LVLEYMP 55
EVAVK+F+ R +S+ E E+ +++ RH N++ I++ + + LV +Y
Sbjct: 67 EVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 123
Query: 56 HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGC----SAPVI-HCDLKPDNVLLD 110
HGSL YL ++ + + + AS L +LH P I H DLK N+L+
Sbjct: 124 HGSLFDYLNRYTVTVEGM--IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK 181
Query: 111 DNLVAYLSDFGIAKLLIGEDQS-----MTQTQTLATIGYMAPEY------GREGRVSTNG 159
N ++D G+A + D + + + T YMAPE +
Sbjct: 182 KNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRA 238
Query: 160 DVYSFGIMLME 170
D+Y+ G++ E
Sbjct: 239 DIYAMGLVFWE 249
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 107
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ L+ L F S V+H DLKP N+L++ L+DFG+A+ T + T
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 165
Query: 142 IGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTGK 175
+ Y APE + ST D++S G + E T +
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 109
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ L+ L F S V+H DLKP N+L++ L+DFG+A+ T + T
Sbjct: 110 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 167
Query: 142 IGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTGK 175
+ Y APE + ST D++S G + E T +
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Query: 48 ALVLEYMPHGSLEKYLYSSNCILD-IFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDN 106
++ +E+M GSL++ L + I + I +++I V L YL ++H D+KP N
Sbjct: 80 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLRE--KHKIMHRDVKPSN 135
Query: 107 VLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGI 166
+L++ L DFG++ LI SM + + T YM+PE + S D++S G+
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLI---DSMANS-FVGTRSYMSPERLQGTHYSVQSDIWSMGL 191
Query: 167 MLMETFTGKKP 177
L+E G+ P
Sbjct: 192 SLVEMAVGRYP 202
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 111
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ L+ L F S V+H DLKP N+L++ L+DFG+A+ T + T
Sbjct: 112 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 169
Query: 142 IGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTGK 175
+ Y APE + ST D++S G + E T +
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 110
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ L+ L F S V+H DLKP N+L++ L+DFG+A+ T + T
Sbjct: 111 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 168
Query: 142 IGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTGK 175
+ Y APE + ST D++S G + E T +
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 14/181 (7%)
Query: 3 VAVKVFNLQ----CGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
VAVK+ +++ C K E + K + H N++K + L LEY G
Sbjct: 34 VAVKIVDMKRAVDCPENIKK---EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 59 LEKYLYSSNCILDI-FQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYL 117
L + + + QR + + + YLH + H D+KP+N+LLD+ +
Sbjct: 91 LFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKI 145
Query: 118 SDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKK 176
SDFG+A + ++ + T+ Y+APE + DV+S GI+L G+
Sbjct: 146 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 177 P 177
P
Sbjct: 206 P 206
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 109
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ L+ L F S V+H DLKP N+L++ L+DFG+A+ T + T
Sbjct: 110 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 167
Query: 142 IGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTGK 175
+ Y APE + ST D++S G + E T +
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 104/234 (44%), Gaps = 18/234 (7%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++K ++H N++ + E+ LV EY+ L++YL I+++ +
Sbjct: 50 EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQ 108
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ L Y H V+H DLKP N+L+++ L+DFG+A+ + T + T
Sbjct: 109 LLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLAR--AKSIPTKTYDNEVVT 163
Query: 142 IGYMAPE--YGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDWLPIS 199
+ Y P+ G ST D++ G + E TG +P + E L H++ L
Sbjct: 164 LWYRPPDILLGSTD-YSTQIDMWGVGCIFYEMATG-RPLFPGSTVEEQL-HFIFRILGTP 220
Query: 200 TMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK 253
T E +LS E+ + ++ A A +P + +++TKLL+
Sbjct: 221 TEETW-PGILSNEEF------KTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQ 267
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 110
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ L+ L F S V+H DLKP N+L++ L+DFG+A+ T + T
Sbjct: 111 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 168
Query: 142 IGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTGK 175
+ Y APE + ST D++S G + E T +
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY P G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+++D ++DFG AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE--- 203
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 204 --YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 108
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ L+ L F S V+H DLKP N+L++ L+DFG+A+ T + T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 166
Query: 142 IGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTGK 175
+ Y APE + ST D++S G + E T +
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 5/165 (3%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 73
+A K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 59 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ 117
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSM 133
LN + +A + YL ++H DL NVL+ ++DFG AKLL E++
Sbjct: 118 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 174
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
I +MA E + DV+S+G+ + E T G KP
Sbjct: 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 112
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ L+ L F S V+H DLKP N+L++ L+DFG+A+ T + T
Sbjct: 113 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 170
Query: 142 IGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTGK 175
+ Y APE + ST D++S G + E T +
Sbjct: 171 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY P G + +L + R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQ 150
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+++D ++DFG AK + G + T
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE--- 204
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 205 --YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 108
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ L+ L F S V+H DLKP N+L++ L+DFG+A+ T + T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 166
Query: 142 IGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTGK 175
+ Y APE + ST D++S G + E T +
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 77/154 (50%), Gaps = 14/154 (9%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMK-SIRHRNLIKVISSCSNEEFKALVLEYMPHGSLE 60
+VAVK +C F D E ++++ S H N+I+ + + +F+ + +E +L+
Sbjct: 50 DVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATLQ 105
Query: 61 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLD-----DNLVA 115
+Y+ + + + ++ S L +LH S ++H DLKP N+L+ + A
Sbjct: 106 EYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKA 162
Query: 116 YLSDFGI-AKLLIGEDQSMTQTQTLATIGYMAPE 148
+SDFG+ KL +G ++ T G++APE
Sbjct: 163 MISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPE 196
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++K + H N++K++ E LV E++ H L+K++ ++ + I L I
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSY 111
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ L+ L F S V+H DLKP N+L++ L+DFG+A+ T + T
Sbjct: 112 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 169
Query: 142 IGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTGK 175
+ Y APE + ST D++S G + E T +
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 5/165 (3%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 73
+A K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 61 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ 119
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSM 133
LN + +A + YL ++H DL NVL+ ++DFG AKLL E++
Sbjct: 120 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 176
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
I +MA E + DV+S+G+ + E T G KP
Sbjct: 177 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 5/165 (3%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 73
+A K E +M S+ + ++ +++ C + L+ + MP G L Y+ +
Sbjct: 66 KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQ 124
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSM 133
LN + +A + YL ++H DL NVL+ ++DFG AKLL E++
Sbjct: 125 YLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 181
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
I +MA E + DV+S+G+ + E T G KP
Sbjct: 182 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 30/175 (17%)
Query: 86 LEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYM 145
LE +H ++H DLKP N L+ D ++ L DFGIA + + + + + T+ YM
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDXXXVVKDSQVGTVNYM 195
Query: 146 APEYGREGRVS-TNG----------DVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVND 194
PE ++ S NG DV+S G +L GK P + N +++ H + D
Sbjct: 196 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-QISKLHAIID 254
Query: 195 WLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVT 249
P +E D + ++D+ V K C P+QRI+ E++
Sbjct: 255 --PNHEIEFPD---IPEKDLQDVLK------------CCLKRDPKQRISIPELLA 292
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 17/171 (9%)
Query: 12 CGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 71
C R + E +++ RH N+I + +A+ Y+ +E LY +L
Sbjct: 85 CQRTLR----EIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYK---LLK 137
Query: 72 IFQRLN-----IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 126
Q N + + L+Y+H SA V+H DLKP N+L++ + DFG+A++
Sbjct: 138 SQQLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIA 194
Query: 127 IGE-DQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGK 175
E D + T+ +AT Y APE + T D++S G +L E + +
Sbjct: 195 DPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 13/177 (7%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKAL--VLEYMPHGSLEKYLYSSNCILDIFQRLNIM 79
E ++++ +RH+N+I+++ NEE + + V+EY G E + Q
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYF 115
Query: 80 IDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTL 139
+ LEYLH S ++H D+KP N+LL +S G+A+ L T +
Sbjct: 116 CQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQ 172
Query: 140 ATIGYMAPEYGREGRVSTNG---DVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVN 193
+ + PE G + +G D++S G+ L TG P F G+ K + N
Sbjct: 173 GSPAFQPPEIA-NGLDTFSGFKVDIWSAGVTLYNITTGLYP----FEGDNIYKLFEN 224
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 13 GRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDI 72
G + + + E +++ IRH N+I + N+ L+LE + G L +L + +
Sbjct: 56 GVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTED 115
Query: 73 FQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVA----YLSDFGIAKLLIG 128
+ + + + YLH S + H DLKP+N++L D V L DFGIA +
Sbjct: 116 -EATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA 171
Query: 129 EDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
++ T ++APE + D++S G++ +G P
Sbjct: 172 GNEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 21/176 (11%)
Query: 11 QCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCIL 70
Q ++ E ++ +RH N I+ E LV+EY L S++ +L
Sbjct: 54 QSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC--------LGSASDLL 105
Query: 71 DIFQRLNIMIDVAS----ALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 126
++ ++ +++A+ AL+ L + S +IH D+K N+LL + + L DFG A ++
Sbjct: 106 EVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM 165
Query: 127 IGEDQSMTQTQTLATIGYMAPEY---GREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
+ T +MAPE EG+ DV+S GI +E K P +
Sbjct: 166 ------APANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF 215
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 13 GRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDI 72
G + + + E +++ IRH N+I + N+ L+LE + G L +L + +
Sbjct: 70 GVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTED 129
Query: 73 FQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVA----YLSDFGIAKLLIG 128
+ + + + YLH S + H DLKP+N++L D V L DFGIA +
Sbjct: 130 -EATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA 185
Query: 129 EDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
++ T ++APE + D++S G++ +G P
Sbjct: 186 GNEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 13 GRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDI 72
G + + + E +++ IRH N+I + N+ L+LE + G L +L + +
Sbjct: 49 GVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTED 108
Query: 73 FQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVA----YLSDFGIAKLLIG 128
+ + + + YLH S + H DLKP+N++L D V L DFGIA +
Sbjct: 109 -EATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA 164
Query: 129 EDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
++ T ++APE + D++S G++ +G P
Sbjct: 165 GNEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 5/159 (3%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
E ++++ RH L + S + V+EY G L +L + R
Sbjct: 197 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGA 255
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLA 140
++ SAL+YLH V++ DLK +N++LD + ++DFG+ K I + +M
Sbjct: 256 EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM--KTFCG 311
Query: 141 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
T Y+APE + D + G+++ E G+ P Y
Sbjct: 312 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 350
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 104/257 (40%), Gaps = 29/257 (11%)
Query: 1 MEVAVKVF-NLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
M VA+K N + F E M+ H +++K+I + E +++E G L
Sbjct: 39 MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGEL 97
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
+L LD+ + +++AL YL S +H D+ NVL+ L D
Sbjct: 98 RSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGD 154
Query: 120 FGIAKLLIGEDQSMTQ-TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
FG+++ + ED + + ++ I +MAPE R ++ DV+ FG+ + E G KP
Sbjct: 155 FGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 212
Query: 178 TYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVES 237
N ++ + + LP+ C +++L C
Sbjct: 213 FQGVKNNDVIGRIENGERLPMPP--------------------NCPPTLYSLMTKCWAYD 252
Query: 238 PEQRINAKEIVTKLLKI 254
P +R E+ +L I
Sbjct: 253 PSRRPRFTELKAQLSTI 269
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 21/176 (11%)
Query: 11 QCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCIL 70
Q ++ E ++ +RH N I+ E LV+EY L S++ +L
Sbjct: 93 QSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC--------LGSASDLL 144
Query: 71 DIFQRLNIMIDVAS----ALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL 126
++ ++ +++A+ AL+ L + S +IH D+K N+LL + + L DFG A ++
Sbjct: 145 EVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM 204
Query: 127 IGEDQSMTQTQTLATIGYMAPEY---GREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
+ T +MAPE EG+ DV+S GI +E K P +
Sbjct: 205 ------APANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF 254
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 5/159 (3%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
E ++++ RH L + S + V+EY G L +L + R
Sbjct: 200 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGA 258
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLA 140
++ SAL+YLH V++ DLK +N++LD + ++DFG+ K I + +M
Sbjct: 259 EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM--KTFCG 314
Query: 141 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
T Y+APE + D + G+++ E G+ P Y
Sbjct: 315 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 353
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L K+ S + +V+EY P G + +L + R
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQ 150
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+++D ++DFG AK + G + T
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE--- 204
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 205 --YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 77/156 (49%), Gaps = 7/156 (4%)
Query: 25 MMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVAS 84
++K ++H+N++++ +++ LV E+ L+KY S N LD + + +
Sbjct: 54 LLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLK 112
Query: 85 ALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGY 144
L + H S V+H DLKP N+L++ N L+DFG+A+ + + T+ Y
Sbjct: 113 GLGFCH---SRNVLHRDLKPQNLLINRNGELKLADFGLARAF--GIPVRCYSAEVVTLWY 167
Query: 145 MAPEYGREGRV-STNGDVYSFGIMLMETFTGKKPTY 179
P+ ++ ST+ D++S G + E +P +
Sbjct: 168 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLF 203
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 88/210 (41%), Gaps = 20/210 (9%)
Query: 3 VAVKVFNLQ----CGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
VAVK+ +++ C K E + K + H N++K + L LEY G
Sbjct: 34 VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 59 LEKYLYSSNCILDI-FQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYL 117
L + + + QR + + + YLH + H D+KP+N+LLD+ +
Sbjct: 91 LFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKI 145
Query: 118 SDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKK 176
SDFG+A + ++ + T+ Y+APE + DV+S GI+L G+
Sbjct: 146 SDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 177 PTYEFFNGEMTLKHW------VNDWLPIST 200
P + + W +N W I +
Sbjct: 206 PWDQPSDSXQEYSDWKEKKTYLNPWKKIDS 235
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 80/183 (43%), Gaps = 13/183 (7%)
Query: 2 EVAVKVFNLQCGRAFKSFDV--ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
E AVKV N + + + E E++K + H N++K+ + +V E G L
Sbjct: 49 EYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL 108
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDD---NLVAY 116
+ + I+ V S + Y+H ++H DLKP+N+LL+ +
Sbjct: 109 FDEIIKRKRFSE-HDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIK 164
Query: 117 LSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKK 176
+ DFG++ Q+ + T Y+APE R G DV+S G++L +G
Sbjct: 165 IIDFGLSTCF---QQNTKMKDRIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTP 220
Query: 177 PTY 179
P Y
Sbjct: 221 PFY 223
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 14/181 (7%)
Query: 3 VAVKVFNLQ----CGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
VAVK+ +++ C K E + K + H N++K + L LEY G
Sbjct: 34 VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 59 LEKYLYSSNCILDI-FQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYL 117
L + + + QR + + + YLH + H D+KP+N+LLD+ +
Sbjct: 91 LFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKI 145
Query: 118 SDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKK 176
SDFG+A + ++ + T+ Y+APE + DV+S GI+L G+
Sbjct: 146 SDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 177 P 177
P
Sbjct: 206 P 206
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 80/183 (43%), Gaps = 13/183 (7%)
Query: 2 EVAVKVFNLQCGRAFKSFDV--ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
E AVKV N + + + E E++K + H N++K+ + +V E G L
Sbjct: 49 EYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL 108
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDD---NLVAY 116
+ + I+ V S + Y+H ++H DLKP+N+LL+ +
Sbjct: 109 FDEIIKRKRFSE-HDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIK 164
Query: 117 LSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKK 176
+ DFG++ Q+ + T Y+APE R G DV+S G++L +G
Sbjct: 165 IIDFGLSTCF---QQNTKMKDRIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTP 220
Query: 177 PTY 179
P Y
Sbjct: 221 PFY 223
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++K + H N++K++ E LV E++ H L+ ++ ++ + I L I
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEHV-HQDLKTFM-DASALTGIPLPL-IKSY 107
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ L+ L F S V+H DLKP N+L++ L+DFG+A+ T T + T
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 165
Query: 142 IGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTGK 175
+ Y APE + ST D++S G + E T +
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 14/181 (7%)
Query: 3 VAVKVFNLQ----CGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
VAVK+ +++ C K E + K + H N++K + L LEY G
Sbjct: 34 VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 59 LEKYLYSSNCILDI-FQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYL 117
L + + + QR + + + YLH + H D+KP+N+LLD+ +
Sbjct: 91 LFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKI 145
Query: 118 SDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKK 176
SDFG+A + ++ + T+ Y+APE + DV+S GI+L G+
Sbjct: 146 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 177 P 177
P
Sbjct: 206 P 206
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 30/175 (17%)
Query: 86 LEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYM 145
LE +H ++H DLKP N L+ D ++ L DFGIA + + S+ + + + YM
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGAVNYM 223
Query: 146 APEYGREGRVS-TNG----------DVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVND 194
PE ++ S NG DV+S G +L GK P + N +++ H + D
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-QISKLHAIID 282
Query: 195 WLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVT 249
P +E D + ++D+ V K C P+QRI+ E++
Sbjct: 283 --PNHEIEFPD---IPEKDLQDVLK------------CCLKRDPKQRISIPELLA 320
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 14/181 (7%)
Query: 3 VAVKVFNLQ----CGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
VAVK+ +++ C K E + K + H N++K + L LEY G
Sbjct: 34 VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 59 LEKYLYSSNCILDI-FQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYL 117
L + + + QR + + + YLH + H D+KP+N+LLD+ +
Sbjct: 91 LFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKI 145
Query: 118 SDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKK 176
SDFG+A + ++ + T+ Y+APE + DV+S GI+L G+
Sbjct: 146 SDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 177 P 177
P
Sbjct: 206 P 206
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 14/181 (7%)
Query: 3 VAVKVFNLQ----CGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
VAVK+ +++ C K E + K + H N++K + L LEY G
Sbjct: 35 VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91
Query: 59 LEKYLYSSNCILDI-FQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYL 117
L + + + QR + + + YLH + H D+KP+N+LLD+ +
Sbjct: 92 LFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKI 146
Query: 118 SDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKK 176
SDFG+A + ++ + T+ Y+APE + DV+S GI+L G+
Sbjct: 147 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
Query: 177 P 177
P
Sbjct: 207 P 207
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 11/173 (6%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
V C + S R ++ + + + + +E + GSL + + C+ + + L +
Sbjct: 116 VACAGLSSPR---IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPED-RALYYLG 171
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLI--GEDQSM-TQT 136
LEYLH + ++H D+K DNVLL D A L DFG A L G +S+ T
Sbjct: 172 QALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 228
Query: 137 QTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLK 189
T +MAPE D++S M++ G P ++F G + LK
Sbjct: 229 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLK 281
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 5/159 (3%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
E ++++ RH L + S + V+EY G L +L + R
Sbjct: 57 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGA 115
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLA 140
++ SAL+YLH V++ DLK +N++LD + ++DFG+ K I + +M
Sbjct: 116 EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM--KXFCG 171
Query: 141 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
T Y+APE + D + G+++ E G+ P Y
Sbjct: 172 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 210
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 14/181 (7%)
Query: 3 VAVKVFNLQ----CGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
VAVK+ +++ C K E + K + H N++K + L LEY G
Sbjct: 34 VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 59 LEKYLYSSNCILDI-FQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYL 117
L + + + QR + + + YLH + H D+KP+N+LLD+ +
Sbjct: 91 LFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKI 145
Query: 118 SDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKK 176
SDFG+A + ++ + T+ Y+APE + DV+S GI+L G+
Sbjct: 146 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 177 P 177
P
Sbjct: 206 P 206
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 78 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 136
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+L+D+ ++DFG AK + G + T
Sbjct: 137 IVLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLC-----GT 188
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 189 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 226
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 5/159 (3%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
E ++++ RH L + S + V+EY G L +L + R
Sbjct: 58 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGA 116
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLA 140
++ SAL+YLH V++ DLK +N++LD + ++DFG+ K I + +M
Sbjct: 117 EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM--KXFCG 172
Query: 141 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
T Y+APE + D + G+++ E G+ P Y
Sbjct: 173 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 211
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 11/173 (6%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
V C + S R ++ + + + + +E + GSL + + C+ + + L +
Sbjct: 118 VACAGLSSPR---IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPED-RALYYLG 173
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLI--GEDQSM-TQT 136
LEYLH + ++H D+K DNVLL D A L DFG A L G +S+ T
Sbjct: 174 QALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 230
Query: 137 QTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLK 189
T +MAPE D++S M++ G P ++F G + LK
Sbjct: 231 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLK 283
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 14/181 (7%)
Query: 3 VAVKVFNLQ----CGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
VAVK+ +++ C K E + K + H N++K + L LEY G
Sbjct: 34 VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 59 LEKYLYSSNCILDI-FQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYL 117
L + + + QR + + + YLH + H D+KP+N+LLD+ +
Sbjct: 91 LFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKI 145
Query: 118 SDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKK 176
SDFG+A + ++ + T+ Y+APE + DV+S GI+L G+
Sbjct: 146 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 177 P 177
P
Sbjct: 206 P 206
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 11/173 (6%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
V C + S R ++ + + + + +E + GSL + + C+ + + L +
Sbjct: 102 VACAGLSSPR---IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPED-RALYYLG 157
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLI--GEDQSM-TQT 136
LEYLH + ++H D+K DNVLL D A L DFG A L G +S+ T
Sbjct: 158 QALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 214
Query: 137 QTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLK 189
T +MAPE D++S M++ G P ++F G + LK
Sbjct: 215 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLK 267
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 14/181 (7%)
Query: 3 VAVKVFNLQ----CGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
VAVK+ +++ C K E + K + H N++K + L LEY G
Sbjct: 34 VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 59 LEKYLYSSNCILDI-FQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYL 117
L + + + QR + + + YLH + H D+KP+N+LLD+ +
Sbjct: 91 LFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKI 145
Query: 118 SDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKK 176
SDFG+A + ++ + T+ Y+APE + DV+S GI+L G+
Sbjct: 146 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 177 P 177
P
Sbjct: 206 P 206
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 5/159 (3%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
E ++++ RH L + S + V+EY G L +L + R
Sbjct: 59 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGA 117
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLA 140
++ SAL+YLH V++ DLK +N++LD + ++DFG+ K I + +M
Sbjct: 118 EIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM--KXFCG 173
Query: 141 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
T Y+APE + D + G+++ E G+ P Y
Sbjct: 174 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 212
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 104/257 (40%), Gaps = 29/257 (11%)
Query: 1 MEVAVKVF-NLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
M VA+K N + F E M+ H +++K+I + E +++E G L
Sbjct: 419 MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGEL 477
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
+L LD+ + +++AL YL S +H D+ NVL+ L D
Sbjct: 478 RSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGD 534
Query: 120 FGIAKLLIGEDQSMTQ-TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
FG+++ + ED + + ++ I +MAPE R ++ DV+ FG+ + E G KP
Sbjct: 535 FGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 592
Query: 178 TYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVES 237
N ++ + + LP+ C +++L C
Sbjct: 593 FQGVKNNDVIGRIENGERLPMPP--------------------NCPPTLYSLMTKCWAYD 632
Query: 238 PEQRINAKEIVTKLLKI 254
P +R E+ +L I
Sbjct: 633 PSRRPRFTELKAQLSTI 649
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 11/159 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLA- 140
+ EYLH S +I+ DLKP+N+L+D ++DFG AK + G +T LA
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLAG 200
Query: 141 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
T Y+APE + D ++ G+++ E G P +
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 14/181 (7%)
Query: 3 VAVKVFNLQ----CGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
VAVK+ +++ C K E + K + H N++K + L LEY G
Sbjct: 34 VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 59 LEKYLYSSNCILDI-FQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYL 117
L + + + QR + + + YLH + H D+KP+N+LLD+ +
Sbjct: 91 LFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKI 145
Query: 118 SDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKK 176
SDFG+A + ++ + T+ Y+APE + DV+S GI+L G+
Sbjct: 146 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 177 P 177
P
Sbjct: 206 P 206
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 29/215 (13%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL--- 59
V V F G + + E + ++H ++++++ + S++ +V E+M L
Sbjct: 57 VDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFE 116
Query: 60 ------EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL---D 110
++YS + M + AL Y H +IH D+KP+NVLL +
Sbjct: 117 IVKRADAGFVYSEAVAS------HYMRQILEALRYCH---DNNIIHRDVKPENVLLASKE 167
Query: 111 DNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLME 170
++ L DFG+A + +GE + + T +MAPE + DV+ G++L
Sbjct: 168 NSAPVKLGDFGVA-IQLGE-SGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFI 225
Query: 171 TFTGKKPTY----EFFNGEMTLKHWVN--DWLPIS 199
+G P Y F G + K+ +N W IS
Sbjct: 226 LLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHIS 260
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 80/183 (43%), Gaps = 13/183 (7%)
Query: 2 EVAVKVFNLQCGRAFKSFDV--ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
E AVKV N + + + E E++K + H N++K+ + +V E G L
Sbjct: 49 EYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL 108
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDD---NLVAY 116
+ + I+ V S + Y+H ++H DLKP+N+LL+ +
Sbjct: 109 FDEIIKRKRFSE-HDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIK 164
Query: 117 LSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKK 176
+ DFG++ Q+ + T Y+APE R G DV+S G++L +G
Sbjct: 165 IIDFGLSTCF---QQNTKMKDRIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTP 220
Query: 177 PTY 179
P Y
Sbjct: 221 PFY 223
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 14/181 (7%)
Query: 3 VAVKVFNLQ----CGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
VAVK+ +++ C K E + K + H N++K + L LEY G
Sbjct: 33 VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 89
Query: 59 LEKYLYSSNCILDI-FQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYL 117
L + + + QR + + + YLH + H D+KP+N+LLD+ +
Sbjct: 90 LFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKI 144
Query: 118 SDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKK 176
SDFG+A + ++ + T+ Y+APE + DV+S GI+L G+
Sbjct: 145 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 204
Query: 177 P 177
P
Sbjct: 205 P 205
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 13/105 (12%)
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMT- 134
L+I + +A A+E+LH S ++H DLKP N+ + V + DFG+ + +++ T
Sbjct: 121 LHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 135 ---------QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLME 170
T + T YM+PE S D++S G++L E
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFE 222
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQ 149
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+L+D ++DFG AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 14/181 (7%)
Query: 3 VAVKVFNLQ----CGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
VAVK+ +++ C K E + K + H N++K + L LEY G
Sbjct: 34 VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 59 LEKYLYSSNCILDI-FQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYL 117
L + + + QR + + + YLH + H D+KP+N+LLD+ +
Sbjct: 91 LFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKI 145
Query: 118 SDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKK 176
SDFG+A + ++ + T+ Y+APE + DV+S GI+L G+
Sbjct: 146 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 177 P 177
P
Sbjct: 206 P 206
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 22/167 (13%)
Query: 22 ECEMMKSIRHRNLIKV------ISSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDI 72
E ++M+ + H N++++ +E + LVL+Y+P + Y + + I
Sbjct: 71 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 130
Query: 73 FQRLNIMIDVASALEYLH-FGCSAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLIGED 130
+ +L M + +L Y+H FG + H D+KP N+LLD D V L DFG AK L+ +
Sbjct: 131 YVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 185
Query: 131 QSMTQTQTLATIGYMAPE--YGREGRVSTNGDVYSFGIMLMETFTGK 175
+++ + + Y APE +G S+ DV+S G +L E G+
Sbjct: 186 PNVS---XICSRYYRAPELIFGATDYTSSI-DVWSAGCVLAELLLGQ 228
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 14/181 (7%)
Query: 3 VAVKVFNLQ----CGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
VAVK+ +++ C K E + K + H N++K + L LEY G
Sbjct: 35 VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91
Query: 59 LEKYLYSSNCILDI-FQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYL 117
L + + + QR + + + YLH + H D+KP+N+LLD+ +
Sbjct: 92 LFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKI 146
Query: 118 SDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKK 176
SDFG+A + ++ + T+ Y+APE + DV+S GI+L G+
Sbjct: 147 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
Query: 177 P 177
P
Sbjct: 207 P 207
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 22/167 (13%)
Query: 22 ECEMMKSIRHRNLIKV------ISSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDI 72
E ++M+ + H N++++ +E + LVL+Y+P + Y + + I
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 73 FQRLNIMIDVASALEYLH-FGCSAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLIGED 130
+ +L M + +L Y+H FG + H D+KP N+LLD D V L DFG AK L+ +
Sbjct: 123 YVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177
Query: 131 QSMTQTQTLATIGYMAPE--YGREGRVSTNGDVYSFGIMLMETFTGK 175
+++ + + Y APE +G S+ DV+S G +L E G+
Sbjct: 178 PNVS---XICSRYYRAPELIFGATDYTSSI-DVWSAGCVLAELLLGQ 220
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 11/159 (6%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 170
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTL-A 140
+ EYLH S +I+ DLKP+N+L+D ++DFG AK + G T TL
Sbjct: 171 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------ATWTLCG 221
Query: 141 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
T Y+APE + D ++ G+++ E G P +
Sbjct: 222 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 260
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 22/167 (13%)
Query: 22 ECEMMKSIRHRNLIKV------ISSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDI 72
E ++M+ + H N++++ +E + LVL+Y+P + Y + + I
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 73 FQRLNIMIDVASALEYLH-FGCSAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLIGED 130
+ +L M + +L Y+H FG + H D+KP N+LLD D V L DFG AK L+ +
Sbjct: 123 YVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177
Query: 131 QSMTQTQTLATIGYMAPE--YGREGRVSTNGDVYSFGIMLMETFTGK 175
+++ + + Y APE +G S+ DV+S G +L E G+
Sbjct: 178 PNVS---XICSRYYRAPELIFGATDYTSSI-DVWSAGCVLAELLLGQ 220
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 82/177 (46%), Gaps = 29/177 (16%)
Query: 12 CGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 71
C R + E +++ RH N+I + N+ +A +E M L +L + D
Sbjct: 85 CQRTLR----EIKILLRFRHENIIGI-----NDIIRAPTIEQMKDVYLVTHLMGA----D 131
Query: 72 IFQRLN-----------IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
+++ L + + L+Y+H SA V+H DLKP N+LL+ + DF
Sbjct: 132 LYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDF 188
Query: 121 GIAKLLIGE-DQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGK 175
G+A++ + D + T+ +AT Y APE + T D++S G +L E + +
Sbjct: 189 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 22/167 (13%)
Query: 22 ECEMMKSIRHRNLIKV------ISSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDI 72
E ++M+ + H N++++ +E + LVL+Y+P + Y + + I
Sbjct: 75 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 134
Query: 73 FQRLNIMIDVASALEYLH-FGCSAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLIGED 130
+ +L M + +L Y+H FG + H D+KP N+LLD D V L DFG AK L+ +
Sbjct: 135 YVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 189
Query: 131 QSMTQTQTLATIGYMAPE--YGREGRVSTNGDVYSFGIMLMETFTGK 175
+++ + + Y APE +G S+ DV+S G +L E G+
Sbjct: 190 PNVS---XICSRYYRAPELIFGATDYTSSI-DVWSAGCVLAELLLGQ 232
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 86 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQ 144
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+L+D ++DFG AK + G + T
Sbjct: 145 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 196
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 197 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 234
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 22/167 (13%)
Query: 22 ECEMMKSIRHRNLIKV------ISSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDI 72
E ++M+ + H N++++ +E + LVL+Y+P + Y + + I
Sbjct: 64 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 123
Query: 73 FQRLNIMIDVASALEYLH-FGCSAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLIGED 130
+ +L M + +L Y+H FG + H D+KP N+LLD D V L DFG AK L+ +
Sbjct: 124 YVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 178
Query: 131 QSMTQTQTLATIGYMAPE--YGREGRVSTNGDVYSFGIMLMETFTGK 175
+++ + + Y APE +G S+ DV+S G +L E G+
Sbjct: 179 PNVS---XICSRYYRAPELIFGATDYTSSI-DVWSAGCVLAELLLGQ 221
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L K+ S + +V+EY P G + +L + R
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQ 150
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+++D ++DFG AK + G + T
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE--- 204
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 205 --YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 22/167 (13%)
Query: 22 ECEMMKSIRHRNLIKV------ISSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDI 72
E ++M+ + H N++++ +E + LVL+Y+P + Y + + I
Sbjct: 82 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 141
Query: 73 FQRLNIMIDVASALEYLH-FGCSAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLIGED 130
+ +L M + +L Y+H FG + H D+KP N+LLD D V L DFG AK L+ +
Sbjct: 142 YVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 196
Query: 131 QSMTQTQTLATIGYMAPE--YGREGRVSTNGDVYSFGIMLMETFTGK 175
+++ + + Y APE +G S+ DV+S G +L E G+
Sbjct: 197 PNVS---XICSRYYRAPELIFGATDYTSSI-DVWSAGCVLAELLLGQ 239
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L K+ S + +V+EY P G + +L + R
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQ 150
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+++D ++DFG AK + G + T
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE--- 204
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 205 --YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 22/167 (13%)
Query: 22 ECEMMKSIRHRNLIKV------ISSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDI 72
E ++M+ + H N++++ +E + LVL+Y+P + Y + + I
Sbjct: 97 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 156
Query: 73 FQRLNIMIDVASALEYLH-FGCSAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLIGED 130
+ +L M + +L Y+H FG + H D+KP N+LLD D V L DFG AK L+ +
Sbjct: 157 YVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 211
Query: 131 QSMTQTQTLATIGYMAPE--YGREGRVSTNGDVYSFGIMLMETFTGK 175
+++ + + Y APE +G S+ DV+S G +L E G+
Sbjct: 212 PNVS---XICSRYYRAPELIFGATDYTSSI-DVWSAGCVLAELLLGQ 254
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
VA +E+L S IH DL N+LL + V + DFG+A+ + + + +
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
+ +MAPE + + DV+SFG++L E F+ G P
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 293
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 72/164 (43%), Gaps = 12/164 (7%)
Query: 20 DVECEMMK------SIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 73
DVEC M + + H L ++ + V+E++ G L ++ S +
Sbjct: 66 DVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEAR 125
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSM 133
R ++ SAL +LH +I+ DLK DNVLLD L+DFG+ K I +
Sbjct: 126 ARF-YAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC--NGV 179
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
T T Y+APE +E D ++ G++L E G P
Sbjct: 180 TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAP 223
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQ 149
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+L+D ++DFG AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQ 149
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+L+D ++DFG AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 22/167 (13%)
Query: 22 ECEMMKSIRHRNLIKV------ISSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDI 72
E ++M+ + H N++++ +E + LVL+Y+P + Y + + I
Sbjct: 75 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 134
Query: 73 FQRLNIMIDVASALEYLH-FGCSAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLIGED 130
+ +L M + +L Y+H FG + H D+KP N+LLD D V L DFG AK L+ +
Sbjct: 135 YVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 189
Query: 131 QSMTQTQTLATIGYMAPE--YGREGRVSTNGDVYSFGIMLMETFTGK 175
+++ + + Y APE +G S+ DV+S G +L E G+
Sbjct: 190 PNVS---XICSRYYRAPELIFGATDYTSSI-DVWSAGCVLAELLLGQ 232
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
VA +E+L S IH DL N+LL + V + DFG+A+ + + + +
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
+ +MAPE + + DV+SFG++L E F+ G P
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 295
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 18/152 (11%)
Query: 77 NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQT 136
I + + ALE+LH S VIH D+KP NVL++ + DFGI+ L+ S+ +T
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLV---DSVAKT 211
Query: 137 QTLATIGYMA-----PEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHW 191
YMA PE ++G S D++S GI ++E + P + LK
Sbjct: 212 IDAGCKPYMAPERINPELNQKG-YSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV 270
Query: 192 VNDWLPISTMEVVDANLLSQEDIHFVAKEQCV 223
V + P + A+ S E + F + QC+
Sbjct: 271 VEEPSP-----QLPADKFSAEFVDFTS--QCL 295
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 124/264 (46%), Gaps = 34/264 (12%)
Query: 12 CGRAFKSFDVECEMMKSIRHRNLI---KVISSCSNEEFKAL-VLEYMPHGSLEKYLYSSN 67
C R + E +++ RH N+I +I + + E+ K + +++ + L K L + +
Sbjct: 65 CQRTLR----EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH 120
Query: 68 CILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 127
D + + L+Y+H SA V+H DLKP N+LL+ + DFG+A++
Sbjct: 121 LSND--HICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVAD 175
Query: 128 GE-DQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKPTYEFFNGE 185
+ D + T+ +AT Y APE + T D++S G +L E + + F G
Sbjct: 176 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG- 230
Query: 186 MTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRI--N 243
KH+++ I + ++ + SQED++ + + +++ +L V P R+ N
Sbjct: 231 ---KHYLDQLNHI--LGILGSP--SQEDLNXIINLKARNYLLSLPHKNKV--PWNRLFPN 281
Query: 244 AKEIVTKLLKIRDSLLRNVGGRRI 267
A +K L + D +L +RI
Sbjct: 282 AD---SKALDLLDKMLTFNPHKRI 302
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 22/167 (13%)
Query: 22 ECEMMKSIRHRNLIKV------ISSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDI 72
E ++M+ + H N++++ +E + LVL+Y+P + Y + + I
Sbjct: 67 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 126
Query: 73 FQRLNIMIDVASALEYLH-FGCSAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLIGED 130
+ +L M + +L Y+H FG + H D+KP N+LLD D V L DFG AK L+ +
Sbjct: 127 YVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 181
Query: 131 QSMTQTQTLATIGYMAPE--YGREGRVSTNGDVYSFGIMLMETFTGK 175
+++ + + Y APE +G S+ DV+S G +L E G+
Sbjct: 182 PNVS---XICSRYYRAPELIFGATDYTSSI-DVWSAGCVLAELLLGQ 224
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++K + H N++K++ E LV E++ H L+ ++ ++ + I L I
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFM-DASALTGIPLPL-IKSY 108
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ L+ L F S V+H DLKP+N+L++ L+DFG+A+ T + T
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 166
Query: 142 IGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTGK 175
+ Y APE + ST D++S G + E T +
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARF-YAAQ 149
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+L+D ++DFG AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 88/192 (45%), Gaps = 20/192 (10%)
Query: 19 FDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL-EKYLYSSNCILDIFQRLN 77
F E E+MKS+ H N+I++ + + LV+E G L E+ ++ +
Sbjct: 53 FKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKR--VFRESDAAR 110
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVL-LDDNLVAYLS--DFGIAKLLIGEDQSMT 134
IM DV SA+ Y H V H DLKP+N L L D+ + L DFG+A + M
Sbjct: 111 IMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF--KPGKMM 165
Query: 135 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLK----- 189
+T+ + T Y++P+ EG D +S G+M+ G P + E+ LK
Sbjct: 166 RTK-VGTPYYVSPQV-LEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGT 223
Query: 190 --HWVNDWLPIS 199
DWL +S
Sbjct: 224 FTFPEKDWLNVS 235
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQ 170
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+L+D ++DFG AK + G + T
Sbjct: 171 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE--- 224
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 225 --YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 260
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 14/181 (7%)
Query: 3 VAVKVFNLQ----CGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
VAVK+ +++ C K E + K + H N++K + L LEY G
Sbjct: 35 VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91
Query: 59 LEKYLYSSNCILDI-FQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYL 117
L + + + QR + + + YLH + H D+KP+N+LLD+ +
Sbjct: 92 LFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKI 146
Query: 118 SDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKK 176
SDFG+A + ++ + T+ Y+APE + DV+S GI+L G+
Sbjct: 147 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
Query: 177 P 177
P
Sbjct: 207 P 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 14/181 (7%)
Query: 3 VAVKVFNLQ----CGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
VAVK+ +++ C K E + K + H N++K + L LEY G
Sbjct: 35 VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91
Query: 59 LEKYLYSSNCILDI-FQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYL 117
L + + + QR + + + YLH + H D+KP+N+LLD+ +
Sbjct: 92 LFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKI 146
Query: 118 SDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKK 176
SDFG+A + ++ + T+ Y+APE + DV+S GI+L G+
Sbjct: 147 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
Query: 177 P 177
P
Sbjct: 207 P 207
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 14/181 (7%)
Query: 3 VAVKVFNLQ----CGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
VAVK+ +++ C K E + K + H N++K + L LEY G
Sbjct: 35 VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91
Query: 59 LEKYLYSSNCILDI-FQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYL 117
L + + + QR + + + YLH + H D+KP+N+LLD+ +
Sbjct: 92 LFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKI 146
Query: 118 SDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKK 176
SDFG+A + ++ + T+ Y+APE + DV+S GI+L G+
Sbjct: 147 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
Query: 177 P 177
P
Sbjct: 207 P 207
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 20/167 (11%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL-----EKYLYSSNCILDIFQRL 76
E ++ + H N+IK+ +LVLE + G L EK YS D ++
Sbjct: 98 EIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQ- 156
Query: 77 NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLD---DNLVAYLSDFGIAKLLIGEDQSM 133
+ A+ YLH ++H DLKP+N+L + ++DFG++K++ E Q +
Sbjct: 157 -----ILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV--EHQVL 206
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYE 180
+T T GY APE R D++S GI+ G +P Y+
Sbjct: 207 MKT-VCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYD 252
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+L+D ++DFG AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLX-----GT 201
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 12/188 (6%)
Query: 17 KSFDVECEMMKSIRHRNLIKVI----SSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDI 72
+ F E E +K ++H N+++ S+ ++ LV E G+L+ YL + I
Sbjct: 70 QRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFK-VXKI 128
Query: 73 FQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAY-LSDFGIAKLLIGEDQ 131
+ + L++LH + P+IH DLK DN+ + + + D G+A L +
Sbjct: 129 KVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL----KR 183
Query: 132 SMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHW 191
+ + T + APE E + + DVY+FG +E T + P E N +
Sbjct: 184 ASFAKAVIGTPEFXAPEXYEE-KYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRV 242
Query: 192 VNDWLPIS 199
+ P S
Sbjct: 243 TSGVKPAS 250
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 6/147 (4%)
Query: 31 HRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 90
H L+ + S E V+EY+ G L ++ + + R +++ AL YLH
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH 138
Query: 91 FGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYG 150
+I+ DLK DNVLLD L+D+G+ K G T + T Y+APE
Sbjct: 139 ---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE--GLRPGDTTSXFCGTPNYIAPEIL 193
Query: 151 REGRVSTNGDVYSFGIMLMETFTGKKP 177
R + D ++ G+++ E G+ P
Sbjct: 194 RGEDYGFSVDWWALGVLMFEMMAGRSP 220
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 88/192 (45%), Gaps = 20/192 (10%)
Query: 19 FDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL-EKYLYSSNCILDIFQRLN 77
F E E+MKS+ H N+I++ + + LV+E G L E+ ++ +
Sbjct: 70 FKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKR--VFRESDAAR 127
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVL-LDDNLVAYLS--DFGIAKLLIGEDQSMT 134
IM DV SA+ Y H V H DLKP+N L L D+ + L DFG+A + M
Sbjct: 128 IMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF--KPGKMM 182
Query: 135 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLK----- 189
+T+ + T Y++P+ EG D +S G+M+ G P + E+ LK
Sbjct: 183 RTK-VGTPYYVSPQV-LEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGT 240
Query: 190 --HWVNDWLPIS 199
DWL +S
Sbjct: 241 FTFPEKDWLNVS 252
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
VA +E+L S IH DL N+LL + V + DFG+A+ + + + +
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
+ +MAPE + + DV+SFG++L E F+ G P
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 300
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 119/281 (42%), Gaps = 35/281 (12%)
Query: 2 EVAVKVF-NLQCGRAFKSFDVECEMMKSI--RHRNLIKVISS----CSNEEFKALVLEYM 54
+VAVKVF + F+ E E+ +++ RH N++ I++ + L+ +Y
Sbjct: 62 KVAVKVFFTTEEASWFR----ETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYH 117
Query: 55 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH---FGCSA-PVI-HCDLKPDNVLL 109
+GSL YL S+ LD L + S L +LH F P I H DLK N+L+
Sbjct: 118 ENGSLYDYLKSTT--LDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILV 175
Query: 110 DDNLVAYLSDFGIAKLLIGE--DQSMTQTQTLATIGYMAPEYGREGRVSTN------GDV 161
N ++D G+A I + + + + T YM PE E + D+
Sbjct: 176 KKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADM 235
Query: 162 YSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDWLPIST-----MEVVDANLLSQEDIHF 216
YSFG++L E ++ E L + +D +P E+V L +
Sbjct: 236 YSFGLILWE--VARRCVSGGIVEEYQLPY--HDLVPSDPSYEDMREIVCIKKLRPSFPNR 291
Query: 217 VAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDS 257
+ ++C+ + L C +P R+ A + L K+ +S
Sbjct: 292 WSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES 332
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
VA +E+L S IH DL N+LL + V + DFG+A+ + + + +
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKP 177
+ +MAPE + + DV+SFG++L E F+ G P
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 302
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 23/200 (11%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQR---LNI 78
E ++ +++H N+++ S +V++Y G L K + + +L FQ L+
Sbjct: 73 EVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVL--FQEDQILDW 130
Query: 79 MIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQT 138
+ + AL+++H ++H D+K N+ L + L DFGIA++L + T
Sbjct: 131 FVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL-----NSTVELA 182
Query: 139 LATIG---YMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEM---TLKHWV 192
A IG Y++PE + D+++ G +L E T K + F G M LK
Sbjct: 183 RACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLK---HAFEAGSMKNLVLKIIS 239
Query: 193 NDWLPISTMEVVD-ANLLSQ 211
+ P+S D +L+SQ
Sbjct: 240 GSFPPVSLHYSYDLRSLVSQ 259
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 14/181 (7%)
Query: 3 VAVKVFNLQ----CGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
VAVK+ +++ C K E + K + H N++K + L LEY G
Sbjct: 35 VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91
Query: 59 LEKYLYSSNCILDI-FQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYL 117
L + + + QR + + + YLH + H D+KP+N+LLD+ +
Sbjct: 92 LFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKI 146
Query: 118 SDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKK 176
SDFG+A + ++ + T+ Y+APE + DV+S GI+L G+
Sbjct: 147 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
Query: 177 P 177
P
Sbjct: 207 P 207
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 22/167 (13%)
Query: 22 ECEMMKSIRHRNLIKV------ISSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDI 72
E ++M+ + H N++++ +E + LVL+Y+P + Y + + I
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 73 FQRLNIMIDVASALEYLH-FGCSAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLIGED 130
+ +L M + +L Y+H FG + H D+KP N+LLD D V L DFG AK L+ +
Sbjct: 123 YVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177
Query: 131 QSMTQTQTLATIGYMAPE--YGREGRVSTNGDVYSFGIMLMETFTGK 175
+++ + + Y APE +G S+ DV+S G +L E G+
Sbjct: 178 PNVSY---ICSRYYRAPELIFGATDYTSSI-DVWSAGCVLAELLLGQ 220
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 22/167 (13%)
Query: 22 ECEMMKSIRHRNLIKV------ISSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDI 72
E ++M+ + H N++++ +E + LVL+Y+P + Y + + I
Sbjct: 68 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 127
Query: 73 FQRLNIMIDVASALEYLH-FGCSAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLIGED 130
+ +L M + +L Y+H FG + H D+KP N+LLD D V L DFG AK L+ +
Sbjct: 128 YVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 182
Query: 131 QSMTQTQTLATIGYMAPE--YGREGRVSTNGDVYSFGIMLMETFTGK 175
+++ + + Y APE +G S+ DV+S G +L E G+
Sbjct: 183 PNVSY---ICSRYYRAPELIFGATDYTSSI-DVWSAGCVLAELLLGQ 225
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 14/181 (7%)
Query: 3 VAVKVFNLQ----CGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
VAVK+ +++ C K E + K + H N++K + L LEY G
Sbjct: 34 VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 90
Query: 59 LEKYLYSSNCILDI-FQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYL 117
L + + + QR + + + YLH + H D+KP+N+LLD+ +
Sbjct: 91 LFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKI 145
Query: 118 SDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKK 176
SDFG+A + ++ + T+ Y+APE + DV+S GI+L G+
Sbjct: 146 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 177 P 177
P
Sbjct: 206 P 206
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 22/167 (13%)
Query: 22 ECEMMKSIRHRNLIKV------ISSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDI 72
E ++M+ + H N++++ +E + LVL+Y+P + Y + + I
Sbjct: 91 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 150
Query: 73 FQRLNIMIDVASALEYLH-FGCSAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLIGED 130
+ +L M + +L Y+H FG + H D+KP N+LLD D V L DFG AK L+ +
Sbjct: 151 YVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 205
Query: 131 QSMTQTQTLATIGYMAPE--YGREGRVSTNGDVYSFGIMLMETFTGK 175
+++ + + Y APE +G S+ DV+S G +L E G+
Sbjct: 206 PNVSY---ICSRYYRAPELIFGATDYTSSI-DVWSAGCVLAELLLGQ 248
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 22/167 (13%)
Query: 22 ECEMMKSIRHRNLIKV------ISSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDI 72
E ++M+ + H N++++ +E + LVL+Y+P + Y + + I
Sbjct: 76 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 135
Query: 73 FQRLNIMIDVASALEYLH-FGCSAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLIGED 130
+ +L M + +L Y+H FG + H D+KP N+LLD D V L DFG AK L+ +
Sbjct: 136 YVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 190
Query: 131 QSMTQTQTLATIGYMAPE--YGREGRVSTNGDVYSFGIMLMETFTGK 175
+++ + + Y APE +G S+ DV+S G +L E G+
Sbjct: 191 PNVSY---ICSRYYRAPELIFGATDYTSSI-DVWSAGCVLAELLLGQ 233
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 6/147 (4%)
Query: 31 HRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 90
H L+ + S E V+EY+ G L ++ + + R +++ AL YLH
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH 123
Query: 91 FGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYG 150
+I+ DLK DNVLLD L+D+G+ K G T + T Y+APE
Sbjct: 124 ---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE--GLRPGDTTSXFCGTPNYIAPEIL 178
Query: 151 REGRVSTNGDVYSFGIMLMETFTGKKP 177
R + D ++ G+++ E G+ P
Sbjct: 179 RGEDYGFSVDWWALGVLMFEMMAGRSP 205
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 84/191 (43%), Gaps = 20/191 (10%)
Query: 2 EVAVKVFNLQCGR--AFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
EVA+++ +++ K+F E + RH N++ + +C + A++ +L
Sbjct: 57 EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTL 116
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
+ + +LD+ + I ++ + YLH + ++H DLK NV D+ V ++D
Sbjct: 117 YSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYDNGKVV-ITD 172
Query: 120 FGI----AKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVST---------NGDVYSFGI 166
FG+ L G + + Q + ++APE R+ T + DV++ G
Sbjct: 173 FGLFSISGVLQAGRREDKLRIQN-GWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGT 231
Query: 167 MLMETFTGKKP 177
+ E + P
Sbjct: 232 IWYELHAREWP 242
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 22/167 (13%)
Query: 22 ECEMMKSIRHRNLIKV------ISSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDI 72
E ++M+ + H N++++ +E + LVL+Y+P + Y + + I
Sbjct: 97 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 156
Query: 73 FQRLNIMIDVASALEYLH-FGCSAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLIGED 130
+ +L M + +L Y+H FG + H D+KP N+LLD D V L DFG AK L+ +
Sbjct: 157 YVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 211
Query: 131 QSMTQTQTLATIGYMAPE--YGREGRVSTNGDVYSFGIMLMETFTGK 175
+++ + + Y APE +G S+ DV+S G +L E G+
Sbjct: 212 PNVSY---ICSRYYRAPELIFGATDYTSSI-DVWSAGCVLAELLLGQ 254
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 6/147 (4%)
Query: 31 HRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 90
H L+ + S E V+EY+ G L ++ + + R +++ AL YLH
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH 170
Query: 91 FGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYG 150
+I+ DLK DNVLLD L+D+G+ K G T + T Y+APE
Sbjct: 171 ---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE--GLRPGDTTSTFCGTPNYIAPEIL 225
Query: 151 REGRVSTNGDVYSFGIMLMETFTGKKP 177
R + D ++ G+++ E G+ P
Sbjct: 226 RGEDYGFSVDWWALGVLMFEMMAGRSP 252
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 6/147 (4%)
Query: 31 HRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 90
H L+ + S E V+EY+ G L ++ + + R +++ AL YLH
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH 127
Query: 91 FGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYG 150
+I+ DLK DNVLLD L+D+G+ K G T + T Y+APE
Sbjct: 128 ---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE--GLRPGDTTSXFCGTPNYIAPEIL 182
Query: 151 REGRVSTNGDVYSFGIMLMETFTGKKP 177
R + D ++ G+++ E G+ P
Sbjct: 183 RGEDYGFSVDWWALGVLMFEMMAGRSP 209
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+L+D ++DFG AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 10/106 (9%)
Query: 77 NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQT 136
+ + + AL YL VIH D+KP N+LLD+ L DFGI+ L+ +D++ ++
Sbjct: 128 KMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLV-DDKAKDRS 184
Query: 137 QTLATIGYMAPEY-----GREGRVSTNGDVYSFGIMLMETFTGKKP 177
A YMAPE + DV+S GI L+E TG+ P
Sbjct: 185 AGCAA--YMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 12 CGRAFKSFDVECEMMKSIRHRNLI---KVISSCSNEEFKAL-VLEYMPHGSLEKYLYSSN 67
C R + E +++ + RH N+I +I + + E+ K + +++ + L K L + +
Sbjct: 67 CQRTLR----EIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH 122
Query: 68 CILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 127
D + + L+Y+H SA V+H DLKP N+LL+ + DFG+A++
Sbjct: 123 LSND--HICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 177
Query: 128 GE-DQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGK 175
+ D + T+ +AT Y APE + T D++S G +L E + +
Sbjct: 178 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 86/167 (51%), Gaps = 22/167 (13%)
Query: 22 ECEMMKSIRHRNLIKV----ISSCSNEE--FKALVLEYMP---HGSLEKYLYSSNCILDI 72
E ++M+ + H N++++ SS ++ + LVL+Y+P + Y + + I
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 73 FQRLNIMIDVASALEYLH-FGCSAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLIGED 130
+ +L M + +L Y+H FG + H D+KP N+LLD D V L DFG AK L+ +
Sbjct: 123 YVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177
Query: 131 QSMTQTQTLATIGYMAPE--YGREGRVSTNGDVYSFGIMLMETFTGK 175
+++ + + Y APE +G S+ DV+S G +L E G+
Sbjct: 178 PNVS---XICSRYYRAPELIFGATDYTSSI-DVWSAGCVLAELLLGQ 220
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 124/264 (46%), Gaps = 34/264 (12%)
Query: 12 CGRAFKSFDVECEMMKSIRHRNLI---KVISSCSNEEFKAL-VLEYMPHGSLEKYLYSSN 67
C R + E +++ RH N+I +I + + E+ K + +++ + L K L + +
Sbjct: 65 CQRTLR----EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH 120
Query: 68 CILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 127
D + + L+Y+H SA V+H DLKP N+LL+ + DFG+A++
Sbjct: 121 LSND--HICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVAD 175
Query: 128 GE-DQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKPTYEFFNGE 185
+ D + T+ +AT Y APE + T D++S G +L E + + F G
Sbjct: 176 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP----IFPG- 230
Query: 186 MTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRI--N 243
KH+++ I + ++ + SQED++ + + +++ +L V P R+ N
Sbjct: 231 ---KHYLDQLNHI--LGILGSP--SQEDLNXIINLKARNYLLSLPHKNKV--PWNRLFPN 281
Query: 244 AKEIVTKLLKIRDSLLRNVGGRRI 267
A +K L + D +L +RI
Sbjct: 282 AD---SKALDLLDKMLTFNPHKRI 302
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 12/106 (11%)
Query: 79 MIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQT 138
M+ ++ LH+ +H D+KPDNVLLD N L+DFG + L + +D ++ +
Sbjct: 184 MVLAIDSIHQLHY------VHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVA 236
Query: 139 LATIGYMAPEYGRE-----GRVSTNGDVYSFGIMLMETFTGKKPTY 179
+ T Y++PE + G+ D +S G+ + E G+ P Y
Sbjct: 237 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFY 282
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+L+D ++DFG AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+L+D ++DFG AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 22/167 (13%)
Query: 22 ECEMMKSIRHRNLIKV------ISSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDI 72
E ++M+ + H N++++ +E + LVL+Y+P + Y + + I
Sbjct: 99 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 158
Query: 73 FQRLNIMIDVASALEYLH-FGCSAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLIGED 130
+ +L M + +L Y+H FG + H D+KP N+LLD D V L DFG AK L+ +
Sbjct: 159 YVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 213
Query: 131 QSMTQTQTLATIGYMAPE--YGREGRVSTNGDVYSFGIMLMETFTGK 175
+++ + + Y APE +G S+ DV+S G +L E G+
Sbjct: 214 PNVSY---ICSRYYRAPELIFGATDYTSSI-DVWSAGCVLAELLLGQ 256
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 16/155 (10%)
Query: 29 IRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 88
+ RN +K +++ + + +EY + +L ++S N + + + AL Y
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSY 131
Query: 89 LHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK-------LLIGEDQSMTQ-----T 136
+H S +IH DLKP N+ +D++ + DFG+AK +L + Q++ T
Sbjct: 132 IH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLT 188
Query: 137 QTLATIGYMAPE-YGREGRVSTNGDVYSFGIMLME 170
+ T Y+A E G + D+YS GI+ E
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFE 223
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 22/167 (13%)
Query: 22 ECEMMKSIRHRNLIKV------ISSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDI 72
E ++M+ + H N++++ +E + LVL+Y+P + Y + + I
Sbjct: 101 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 160
Query: 73 FQRLNIMIDVASALEYLH-FGCSAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLIGED 130
+ +L M + +L Y+H FG + H D+KP N+LLD D V L DFG AK L+ +
Sbjct: 161 YVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 215
Query: 131 QSMTQTQTLATIGYMAPE--YGREGRVSTNGDVYSFGIMLMETFTGK 175
+++ + + Y APE +G S+ DV+S G +L E G+
Sbjct: 216 PNVSY---ICSRYYRAPELIFGATDYTSSI-DVWSAGCVLAELLLGQ 258
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+L+D ++DFG AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 150
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+L+D ++DFG AK + G + T
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 202
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 70/135 (51%), Gaps = 13/135 (9%)
Query: 22 ECEMMKSIRHRNLIKVI----SSCSNEEFKAL--VLEYMPHGSLEKYLYSSNCILDIFQR 75
E +++K +H N+I + + EFK++ VL+ M L + ++SS L +
Sbjct: 103 ELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQP-LTLEHV 160
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE--DQSM 133
+ + L+Y+H SA VIH DLKP N+L+++N + DFG+A+ L +
Sbjct: 161 RYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY 217
Query: 134 TQTQTLATIGYMAPE 148
T+ +AT Y APE
Sbjct: 218 FMTEYVATRWYRAPE 232
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 12/106 (11%)
Query: 79 MIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQT 138
M+ ++ LH+ +H D+KPDNVLLD N L+DFG + L + +D ++ +
Sbjct: 200 MVLAIDSIHQLHY------VHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVA 252
Query: 139 LATIGYMAPEYGRE-----GRVSTNGDVYSFGIMLMETFTGKKPTY 179
+ T Y++PE + G+ D +S G+ + E G+ P Y
Sbjct: 253 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFY 298
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 19/127 (14%)
Query: 51 LEYMPHGSLEKYLYSSNC-ILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
+E+ G+LE+++ LD L + + ++Y+H S +I+ DLKP N+ L
Sbjct: 99 MEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFL 155
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPE------YGREGRVSTNGDVYS 163
D + DFG+ L + + + ++ T+ YM+PE YG+E D+Y+
Sbjct: 156 VDTKQVKIGDFGLVTSLKNDGK---RXRSKGTLRYMSPEQISSQDYGKE------VDLYA 206
Query: 164 FGIMLME 170
G++L E
Sbjct: 207 LGLILAE 213
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 14/161 (8%)
Query: 48 ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNV 107
+ +L+ M G L +L + R ++ LE++H + V++ DLKP N+
Sbjct: 268 SFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILGLEHMH---NRFVVYRDLKPANI 323
Query: 108 LLDDNLVAYLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPEYGREG-RVSTNGDVYSFG 165
LLD++ +SD G+A D S + ++ T GYMAPE ++G ++ D +S G
Sbjct: 324 LLDEHGHVRISDLGLAC-----DFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLG 378
Query: 166 IMLMETFTGKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDA 206
ML + G P F + KH ++ +E+ D+
Sbjct: 379 CMLFKLLRGHSP---FRQHKTKDKHEIDRMTLTMAVELPDS 416
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+L+D ++DFG AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 14/161 (8%)
Query: 48 ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNV 107
+ +L+ M G L +L + R ++ LE++H + V++ DLKP N+
Sbjct: 268 SFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILGLEHMH---NRFVVYRDLKPANI 323
Query: 108 LLDDNLVAYLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPEYGREG-RVSTNGDVYSFG 165
LLD++ +SD G+A D S + ++ T GYMAPE ++G ++ D +S G
Sbjct: 324 LLDEHGHVRISDLGLAC-----DFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLG 378
Query: 166 IMLMETFTGKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDA 206
ML + G P F + KH ++ +E+ D+
Sbjct: 379 CMLFKLLRGHSP---FRQHKTKDKHEIDRMTLTMAVELPDS 416
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 14/161 (8%)
Query: 48 ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNV 107
+ +L+ M G L +L + R ++ LE++H + V++ DLKP N+
Sbjct: 267 SFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILGLEHMH---NRFVVYRDLKPANI 322
Query: 108 LLDDNLVAYLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPEYGREG-RVSTNGDVYSFG 165
LLD++ +SD G+A D S + ++ T GYMAPE ++G ++ D +S G
Sbjct: 323 LLDEHGHVRISDLGLAC-----DFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLG 377
Query: 166 IMLMETFTGKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDA 206
ML + G P F + KH ++ +E+ D+
Sbjct: 378 CMLFKLLRGHSP---FRQHKTKDKHEIDRMTLTMAVELPDS 415
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 14/161 (8%)
Query: 48 ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNV 107
+ +L+ M G L +L + R ++ LE++H + V++ DLKP N+
Sbjct: 268 SFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILGLEHMH---NRFVVYRDLKPANI 323
Query: 108 LLDDNLVAYLSDFGIAKLLIGEDQSMTQTQ-TLATIGYMAPEYGREG-RVSTNGDVYSFG 165
LLD++ +SD G+A D S + ++ T GYMAPE ++G ++ D +S G
Sbjct: 324 LLDEHGHVRISDLGLAC-----DFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLG 378
Query: 166 IMLMETFTGKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDA 206
ML + G P F + KH ++ +E+ D+
Sbjct: 379 CMLFKLLRGHSP---FRQHKTKDKHEIDRMTLTMAVELPDS 416
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 22/167 (13%)
Query: 22 ECEMMKSIRHRNLIKV------ISSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDI 72
E ++M+ + H N++++ +E + LVL+Y+P + Y + + I
Sbjct: 142 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 201
Query: 73 FQRLNIMIDVASALEYLH-FGCSAPVIHCDLKPDNVLLD-DNLVAYLSDFGIAKLLIGED 130
+ +L M + +L Y+H FG + H D+KP N+LLD D V L DFG AK L+ +
Sbjct: 202 YVKL-YMYQLFRSLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 256
Query: 131 QSMTQTQTLATIGYMAPE--YGREGRVSTNGDVYSFGIMLMETFTGK 175
+++ + + Y APE +G S+ DV+S G +L E G+
Sbjct: 257 PNVSY---ICSRYYRAPELIFGATDYTSSI-DVWSAGCVLAELLLGQ 299
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+L+D ++DFG AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 15/170 (8%)
Query: 12 CGRAFKSFDVECEMMKSIRHRNLI---KVISSCSNEEFKAL-VLEYMPHGSLEKYLYSSN 67
C R + E +++ RH N+I +I + + E+ K + +++ + L K L + +
Sbjct: 65 CQRTLR----EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH 120
Query: 68 CILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 127
D + + L+Y+H SA V+H DLKP N+LL+ + DFG+A++
Sbjct: 121 LSND--HICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVAD 175
Query: 128 GE-DQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGK 175
+ D + T+ +AT Y APE + T D++S G +L E + +
Sbjct: 176 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 6/155 (3%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++K + H N++K++ E LV E++ H L+ ++ ++ + I L I
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFM-DASALTGIPLPL-IKSY 111
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ L+ L F S V+H DLKP N+L++ L+DFG+A+ T + T
Sbjct: 112 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 169
Query: 142 IGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTGK 175
+ Y APE + ST D++S G + E T +
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 70/135 (51%), Gaps = 13/135 (9%)
Query: 22 ECEMMKSIRHRNLIKVI----SSCSNEEFKAL--VLEYMPHGSLEKYLYSSNCILDIFQR 75
E +++K +H N+I + + EFK++ VL+ M L + ++SS L +
Sbjct: 104 ELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQP-LTLEHV 161
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI--GEDQSM 133
+ + L+Y+H SA VIH DLKP N+L+++N + DFG+A+ L +
Sbjct: 162 RYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY 218
Query: 134 TQTQTLATIGYMAPE 148
T+ +AT Y APE
Sbjct: 219 FMTEYVATRWYRAPE 233
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 89/172 (51%), Gaps = 14/172 (8%)
Query: 2 EVAVKVFN---LQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
+VA+K+ N L + E ++ +RH ++IK+ +++ +V+EY +
Sbjct: 40 KVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-E 98
Query: 59 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
L Y+ + + + R + SA+EY H ++H DLKP+N+LLD++L ++
Sbjct: 99 LFDYIVQRDKMSEQEAR-RFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIA 154
Query: 119 DFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG--DVYSFGIML 168
DFG++ ++ D + +T + + Y APE G++ DV+S G++L
Sbjct: 155 DFGLSNIM--TDGNFLKT-SCGSPNYAAPEV-ISGKLYAGPEVDVWSCGVIL 202
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 89/172 (51%), Gaps = 14/172 (8%)
Query: 2 EVAVKVFN---LQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
+VA+K+ N L + E ++ +RH ++IK+ +++ +V+EY +
Sbjct: 31 KVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-E 89
Query: 59 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
L Y+ + + + R + SA+EY H ++H DLKP+N+LLD++L ++
Sbjct: 90 LFDYIVQRDKMSEQEAR-RFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIA 145
Query: 119 DFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG--DVYSFGIML 168
DFG++ ++ D + +T + + Y APE G++ DV+S G++L
Sbjct: 146 DFGLSNIM--TDGNFLKT-SCGSPNYAAPEV-ISGKLYAGPEVDVWSCGVIL 193
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 89/172 (51%), Gaps = 14/172 (8%)
Query: 2 EVAVKVFN---LQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
+VA+K+ N L + E ++ +RH ++IK+ +++ +V+EY +
Sbjct: 35 KVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-E 93
Query: 59 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
L Y+ + + + R + SA+EY H ++H DLKP+N+LLD++L ++
Sbjct: 94 LFDYIVQRDKMSEQEAR-RFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIA 149
Query: 119 DFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG--DVYSFGIML 168
DFG++ ++ D + +T + + Y APE G++ DV+S G++L
Sbjct: 150 DFGLSNIM--TDGNFLKT-SCGSPNYAAPEV-ISGKLYAGPEVDVWSCGVIL 197
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 15/170 (8%)
Query: 12 CGRAFKSFDVECEMMKSIRHRNLI---KVISSCSNEEFKAL-VLEYMPHGSLEKYLYSSN 67
C R + E +++ RH N+I +I + + E+ K + +++ + L K L + +
Sbjct: 69 CQRTLR----EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH 124
Query: 68 CILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 127
D + + L+Y+H SA V+H DLKP N+LL+ + DFG+A++
Sbjct: 125 LSND--HICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVAD 179
Query: 128 GE-DQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGK 175
+ D + T+ +AT Y APE + T D++S G +L E + +
Sbjct: 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 89/172 (51%), Gaps = 14/172 (8%)
Query: 2 EVAVKVFN---LQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
+VA+K+ N L + E ++ +RH ++IK+ +++ +V+EY +
Sbjct: 41 KVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-E 99
Query: 59 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
L Y+ + + + R + SA+EY H ++H DLKP+N+LLD++L ++
Sbjct: 100 LFDYIVQRDKMSEQEAR-RFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIA 155
Query: 119 DFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG--DVYSFGIML 168
DFG++ ++ D + +T + + Y APE G++ DV+S G++L
Sbjct: 156 DFGLSNIMT--DGNFLKT-SCGSPNYAAPEV-ISGKLYAGPEVDVWSCGVIL 203
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 29/177 (16%)
Query: 12 CGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 71
C R + E +++ + RH N+I + N+ +A +E M + Y+ D
Sbjct: 67 CQRTLR----EIKILLAFRHENIIGI-----NDIIRAPTIEQMK----DVYIVQDLMETD 113
Query: 72 IFQRLN-----------IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
+++ L + + L+Y+H SA V+H DLKP N+LL+ + DF
Sbjct: 114 LYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDF 170
Query: 121 GIAKLLIGE-DQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGK 175
G+A++ + D + T+ +AT Y APE + T D++S G +L E + +
Sbjct: 171 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 15/170 (8%)
Query: 12 CGRAFKSFDVECEMMKSIRHRNLI---KVISSCSNEEFKAL-VLEYMPHGSLEKYLYSSN 67
C R + E +++ RH N+I +I + + E+ K + +++ + L K L + +
Sbjct: 65 CQRTLR----EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH 120
Query: 68 CILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 127
D + + L+Y+H SA V+H DLKP N+LL+ + DFG+A++
Sbjct: 121 LSND--HICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 175
Query: 128 GE-DQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGK 175
+ D + T+ +AT Y APE + T D++S G +L E + +
Sbjct: 176 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 76 LNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSM-- 133
L+I I +A A+E+LH S ++H DLKP N+ + V + DFG+ + +++
Sbjct: 167 LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 134 --------TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLME 170
T + T YM+PE S D++S G++L E
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFE 268
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 77/156 (49%), Gaps = 7/156 (4%)
Query: 25 MMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVAS 84
++K ++H+N++++ +++ LV E+ L+KY S N LD + + +
Sbjct: 54 LLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLK 112
Query: 85 ALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGY 144
L + H S V+H DLKP N+L++ N L++FG+A+ + + T+ Y
Sbjct: 113 GLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAF--GIPVRCYSAEVVTLWY 167
Query: 145 MAPEYGREGRV-STNGDVYSFGIMLMETFTGKKPTY 179
P+ ++ ST+ D++S G + E +P +
Sbjct: 168 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLF 203
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 15/170 (8%)
Query: 12 CGRAFKSFDVECEMMKSIRHRNLI---KVISSCSNEEFKAL-VLEYMPHGSLEKYLYSSN 67
C R + E +++ RH N+I +I + + E+ K + +++ + L K L + +
Sbjct: 63 CQRTLR----EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH 118
Query: 68 CILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 127
D + + L+Y+H SA V+H DLKP N+LL+ + DFG+A++
Sbjct: 119 LSND--HICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 173
Query: 128 GE-DQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGK 175
+ D + T+ +AT Y APE + T D++S G +L E + +
Sbjct: 174 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 15/170 (8%)
Query: 12 CGRAFKSFDVECEMMKSIRHRNLI---KVISSCSNEEFKAL-VLEYMPHGSLEKYLYSSN 67
C R + E +++ RH N+I +I + + E+ K + +++ + L K L + +
Sbjct: 63 CQRTLR----EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH 118
Query: 68 CILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 127
D + + L+Y+H SA V+H DLKP N+LL+ + DFG+A++
Sbjct: 119 LSND--HICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 173
Query: 128 GE-DQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGK 175
+ D + T+ +AT Y APE + T D++S G +L E + +
Sbjct: 174 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 15/170 (8%)
Query: 12 CGRAFKSFDVECEMMKSIRHRNLI---KVISSCSNEEFKAL-VLEYMPHGSLEKYLYSSN 67
C R + E +++ RH N+I +I + + E+ K + +++ + L K L + +
Sbjct: 67 CQRTLR----EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH 122
Query: 68 CILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 127
D + + L+Y+H SA V+H DLKP N+LL+ + DFG+A++
Sbjct: 123 LSND--HICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 177
Query: 128 GE-DQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGK 175
+ D + T+ +AT Y APE + T D++S G +L E + +
Sbjct: 178 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 15/170 (8%)
Query: 12 CGRAFKSFDVECEMMKSIRHRNLI---KVISSCSNEEFKAL-VLEYMPHGSLEKYLYSSN 67
C R + E +++ RH N+I +I + + E+ K + +++ + L K L + +
Sbjct: 69 CQRTLR----EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH 124
Query: 68 CILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 127
D + + L+Y+H SA V+H DLKP N+LL+ + DFG+A++
Sbjct: 125 LSND--HICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179
Query: 128 GE-DQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGK 175
+ D + T+ +AT Y APE + T D++S G +L E + +
Sbjct: 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 15/170 (8%)
Query: 12 CGRAFKSFDVECEMMKSIRHRNLI---KVISSCSNEEFKAL-VLEYMPHGSLEKYLYSSN 67
C R + E +++ RH N+I +I + + E+ K + +++ + L K L + +
Sbjct: 70 CQRTLR----EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH 125
Query: 68 CILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 127
D + + L+Y+H SA V+H DLKP N+LL+ + DFG+A++
Sbjct: 126 LSND--HICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 180
Query: 128 GE-DQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGK 175
+ D + T+ +AT Y APE + T D++S G +L E + +
Sbjct: 181 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 15/170 (8%)
Query: 12 CGRAFKSFDVECEMMKSIRHRNLI---KVISSCSNEEFKAL-VLEYMPHGSLEKYLYSSN 67
C R + E +++ RH N+I +I + + E+ K + +++ + L K L + +
Sbjct: 71 CQRTLR----EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH 126
Query: 68 CILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 127
D + + L+Y+H SA V+H DLKP N+LL+ + DFG+A++
Sbjct: 127 LSND--HICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 181
Query: 128 GE-DQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGK 175
+ D + T+ +AT Y APE + T D++S G +L E + +
Sbjct: 182 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 15/170 (8%)
Query: 12 CGRAFKSFDVECEMMKSIRHRNLI---KVISSCSNEEFKAL-VLEYMPHGSLEKYLYSSN 67
C R + E +++ RH N+I +I + + E+ K + +++ + L K L + +
Sbjct: 62 CQRTLR----EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH 117
Query: 68 CILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 127
D + + L+Y+H SA V+H DLKP N+LL+ + DFG+A++
Sbjct: 118 LSND--HICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 172
Query: 128 GE-DQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGK 175
+ D + T+ +AT Y APE + T D++S G +L E + +
Sbjct: 173 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 15/170 (8%)
Query: 12 CGRAFKSFDVECEMMKSIRHRNLI---KVISSCSNEEFKAL-VLEYMPHGSLEKYLYSSN 67
C R + E +++ RH N+I +I + + E+ K + +++ + L K L + +
Sbjct: 69 CQRTLR----EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH 124
Query: 68 CILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 127
D + + L+Y+H SA V+H DLKP N+LL+ + DFG+A++
Sbjct: 125 LSND--HICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179
Query: 128 GE-DQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGK 175
+ D + T+ +AT Y APE + T D++S G +L E + +
Sbjct: 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 15/170 (8%)
Query: 12 CGRAFKSFDVECEMMKSIRHRNLI---KVISSCSNEEFKAL-VLEYMPHGSLEKYLYSSN 67
C R + E +++ RH N+I +I + + E+ K + +++ + L K L + +
Sbjct: 73 CQRTLR----EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH 128
Query: 68 CILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 127
D + + L+Y+H SA V+H DLKP N+LL+ + DFG+A++
Sbjct: 129 LSND--HICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 183
Query: 128 GE-DQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGK 175
+ D + T+ +AT Y APE + T D++S G +L E + +
Sbjct: 184 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 15/170 (8%)
Query: 12 CGRAFKSFDVECEMMKSIRHRNLI---KVISSCSNEEFKAL-VLEYMPHGSLEKYLYSSN 67
C R + E +++ RH N+I +I + + E+ K + +++ + L K L + +
Sbjct: 65 CQRTLR----EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH 120
Query: 68 CILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 127
D + + L+Y+H SA V+H DLKP N+LL+ + DFG+A++
Sbjct: 121 LSND--HICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 175
Query: 128 GE-DQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGK 175
+ D + T+ +AT Y APE + T D++S G +L E + +
Sbjct: 176 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 82/189 (43%), Gaps = 18/189 (9%)
Query: 1 MEVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL- 59
ME AVK+ + + ++ +++ +H N+I + + ++ +V E M G L
Sbjct: 48 MEFAVKIIDKSKRDPTEEIEI---LLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELL 104
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNL----VA 115
+K L + ++ + +EYLH + V+H DLKP N+L D
Sbjct: 105 DKILRQK--FFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESI 159
Query: 116 YLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGK 175
+ DFG AK L E+ + T ++APE D++S G++L TG
Sbjct: 160 RICDFGFAKQLRAENGLLMTP--CYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGY 217
Query: 176 KPTYEFFNG 184
P F NG
Sbjct: 218 TP---FANG 223
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 15/170 (8%)
Query: 12 CGRAFKSFDVECEMMKSIRHRNLI---KVISSCSNEEFKAL-VLEYMPHGSLEKYLYSSN 67
C R + E +++ RH N+I +I + + E+ K + +++ + L K L + +
Sbjct: 85 CQRTLR----EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH 140
Query: 68 CILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 127
D + + L+Y+H SA V+H DLKP N+LL+ + DFG+A++
Sbjct: 141 LSND--HICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 195
Query: 128 GE-DQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGK 175
+ D + T+ +AT Y APE + T D++S G +L E + +
Sbjct: 196 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 29/177 (16%)
Query: 12 CGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILD 71
C R + E +++ RH N+I + N+ +A +E M + Y+ D
Sbjct: 69 CQRTLR----EIKILLRFRHENIIGI-----NDIIRAPTIEQMK----DVYIVQDLMETD 115
Query: 72 IFQRLN-----------IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
+++ L + + L+Y+H SA V+H DLKP N+LL+ + DF
Sbjct: 116 LYKLLKCQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDF 172
Query: 121 GIAKLLIGE-DQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGK 175
G+A++ + D + T+ +AT Y APE + T D++S G +L E + +
Sbjct: 173 GLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 26/165 (15%)
Query: 22 ECEMMKSIRHRNLIKVI----SSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLN 77
E ++K ++H N+I ++ + S E+F + L G+ + S + D +
Sbjct: 77 ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF- 135
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQ 137
++ + L+Y+H SA +IH DLKP NV ++++ + DFG+A+ D+ MT
Sbjct: 136 LVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR---QADEEMT--- 186
Query: 138 TLATIGYMAPEYGREGRVSTNG-------DVYSFGIMLMETFTGK 175
GY+A + R + N D++S G ++ E GK
Sbjct: 187 -----GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 82/170 (48%), Gaps = 20/170 (11%)
Query: 11 QCGRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKA--LVLEYMPHGSLEKYLY 64
RA++ E +MK + H+N+I +++ S EEF+ +V+E M +L + +
Sbjct: 66 HAKRAYR----ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI- 119
Query: 65 SSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 124
LD + ++ + +++LH SA +IH DLKP N+++ + + DFG+A+
Sbjct: 120 --QMELDHERMSYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
Query: 125 LLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTG 174
S T + T Y APE N D++S G+++ E G
Sbjct: 175 T---AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 18/183 (9%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSI------RHRNLIKVISSCSNEEFKALVLEYMPH 56
VAVK+ +++ ++ D + K I H N++K + L LEY
Sbjct: 35 VAVKIVDMK-----RAVDCPENIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSG 89
Query: 57 GSLEKYLYSSNCILDI-FQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVA 115
G L + + + QR + + + YLH + H D+KP+N+LLD+
Sbjct: 90 GELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNL 144
Query: 116 YLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTG 174
+SDFG+A + ++ + T+ Y+APE + DV+S GI+L G
Sbjct: 145 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
Query: 175 KKP 177
+ P
Sbjct: 205 ELP 207
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+L+D ++DFG AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ + G P +
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFF 239
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 11/160 (6%)
Query: 22 ECEMMKSIRHRNLI---KVISSCSNEEFKAL-VLEYMPHGSLEKYLYSSNCILDIFQRLN 77
E +++ RH N+I +I + + E+ K + +++ + L K L + + D
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND--HICY 132
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGE-DQSMTQT 136
+ + L+Y+H SA V+H DLKP N+LL+ + DFG+A++ + D + T
Sbjct: 133 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 189
Query: 137 QTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGK 175
+ +AT Y APE + T D++S G +L E + +
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 82/170 (48%), Gaps = 20/170 (11%)
Query: 11 QCGRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKA--LVLEYMPHGSLEKYLY 64
RA++ E +MK + H+N+I +++ S EEF+ +V+E M +L + +
Sbjct: 66 HAKRAYR----ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI- 119
Query: 65 SSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 124
LD + ++ + +++LH SA +IH DLKP N+++ + + DFG+A+
Sbjct: 120 --QMELDHERMSYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
Query: 125 LLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTG 174
S T + T Y APE N D++S G+++ E G
Sbjct: 175 T---AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++K + H N++K++ E LV E++ L+K++ ++ + I L I
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFM-DASALTGIPLPL-IKSY 109
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ L+ L F S V+H DLKP+N+L++ L+DFG+A+ T + T
Sbjct: 110 LFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 167
Query: 142 IGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTGK 175
+ Y APE + ST D++S G + E T +
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+++D ++DFG AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+APE + D ++ G+++ E G P +
Sbjct: 202 PEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++K + H N++K++ E LV E++ L+K++ ++ + I L I
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFM-DASALTGIPLPL-IKSY 111
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ L+ L F S V+H DLKP+N+L++ L+DFG+A+ T + T
Sbjct: 112 LFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 169
Query: 142 IGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTGK 175
+ Y APE + ST D++S G + E T +
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 38/193 (19%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 48 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 104 LVTHLMGADLNNIVKXQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 158
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-------DVY 162
+++ + DFG+A+ D MT GY+A + R + N D++
Sbjct: 159 NEDXELKILDFGLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 163 SFGIMLMETFTGK 175
S G ++ E TG+
Sbjct: 208 SVGCIMAELLTGR 220
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 13 GRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDI 72
G + + + E ++K I+H N+I + N+ L+LE + G L +L + +
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE 114
Query: 73 FQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVA----YLSDFGIA-KLLI 127
+ + + + + YLH S + H DLKP+N++L D V + DFG+A K+
Sbjct: 115 -EATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF 170
Query: 128 GEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
G + T ++APE + D++S G++ +G P
Sbjct: 171 GNEFK----NIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 19/168 (11%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++K + H N++K+ ++ + LV E G L + S ++ I+
Sbjct: 82 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQ 140
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLL-----DDNLVAYLSDFGIAKLLIGEDQSMTQT 136
V S + Y+H ++H DLKP+N+LL D N+ + DFG++ + S
Sbjct: 141 VLSGITYMH---KNKIVHRDLKPENLLLESKSKDANI--RIIDFGLSTHF---EASKKMK 192
Query: 137 QTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNG 184
+ T Y+APE G DV+S G++L +G P FNG
Sbjct: 193 DKIGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSGCPP----FNG 235
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 81/189 (42%), Gaps = 18/189 (9%)
Query: 1 MEVAVKVFNLQCGRAFKSFDVECE-MMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
ME AVKV + ++ + E E +++ +H N+I + + + LV E M G L
Sbjct: 53 MEYAVKVID----KSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGEL 108
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNL----VA 115
+ + ++ + +EYLH S V+H DLKP N+L D
Sbjct: 109 LDKILRQKFFSEREASF-VLHTIGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECL 164
Query: 116 YLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGK 175
+ DFG AK L E+ + T ++APE + D++S GI+L G
Sbjct: 165 RICDFGFAKQLRAENGLL--MTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGY 222
Query: 176 KPTYEFFNG 184
P F NG
Sbjct: 223 TP---FANG 228
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++K ++H N++K+ ++ LV E++ L+K L L+ + ++
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQ 108
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ + + Y H V+H DLKP N+L++ ++DFG+A+ T + T
Sbjct: 109 LLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYTHEIVT 163
Query: 142 IGYMAPE--YGREGRVSTNGDVYSFGIMLMETFTG 174
+ Y AP+ G + + ST D++S G + E G
Sbjct: 164 LWYRAPDVLMGSK-KYSTTIDIWSVGCIFAEMVNG 197
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 81/189 (42%), Gaps = 18/189 (9%)
Query: 1 MEVAVKVFNLQCGRAFKSFDVECE-MMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 59
ME AVKV + ++ + E E +++ +H N+I + + + LV E M G L
Sbjct: 53 MEYAVKVID----KSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGEL 108
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNL----VA 115
+ + ++ + +EYLH S V+H DLKP N+L D
Sbjct: 109 LDKILRQKFFSEREASF-VLHTIGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECL 164
Query: 116 YLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGK 175
+ DFG AK L E+ + T ++APE + D++S GI+L G
Sbjct: 165 RICDFGFAKQLRAENGLL--MTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGY 222
Query: 176 KPTYEFFNG 184
P F NG
Sbjct: 223 TP---FANG 228
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 9/105 (8%)
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDD---NLVAYLSDFGIAKLLIGEDQSMT 134
IM + A++YLH S + H D+KP+N+L N + L+DFG AK + +
Sbjct: 120 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---S 173
Query: 135 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
T+ T Y+APE + + D++S G+++ G P Y
Sbjct: 174 LTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY 218
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 38/193 (19%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 48 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 158
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-------DVY 162
+++ + DFG+A+ D MT GY+A + R + N D++
Sbjct: 159 NEDCELKILDFGLAR---HTDDEMT--------GYVATRWYRAPEIMLNAMHYNQTVDIW 207
Query: 163 SFGIMLMETFTGK 175
S G ++ E TG+
Sbjct: 208 SVGCIMAELLTGR 220
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 85/191 (44%), Gaps = 22/191 (11%)
Query: 2 EVAVKVFN---LQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
EVAVK+ + L K F E + K + H N++K+ E+ LV EY G
Sbjct: 41 EVAVKIIDKTQLNSSSLQKLFR-EVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGE 99
Query: 59 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS 118
+ YL + + R + SA++Y H ++H DLK +N+LLD + ++
Sbjct: 100 VFDYLVAHGRXKEKEARAKFR-QIVSAVQYCH---QKFIVHRDLKAENLLLDADXNIKIA 155
Query: 119 DFGIAKLLIGEDQSMTQTQTLATIG---YMAPEYGREGRV-STNGDVYSFGIMLMETFTG 174
DFG + ++ + A G Y APE + + DV+S G++L +G
Sbjct: 156 DFGFS------NEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
Query: 175 KKPTYEFFNGE 185
P F+G+
Sbjct: 210 SLP----FDGQ 216
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++K ++H N++K+ ++ LV E++ L+K L L+ + ++
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQ 108
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ + + Y H V+H DLKP N+L++ ++DFG+A+ T + T
Sbjct: 109 LLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYTHEVVT 163
Query: 142 IGYMAPE--YGREGRVSTNGDVYSFGIMLMETFTG 174
+ Y AP+ G + + ST D++S G + E G
Sbjct: 164 LWYRAPDVLMGSK-KYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++K ++H N++K+ ++ LV E++ L+K L L+ + ++
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQ 108
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ + + Y H V+H DLKP N+L++ ++DFG+A+ T + T
Sbjct: 109 LLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYTHEVVT 163
Query: 142 IGYMAPE--YGREGRVSTNGDVYSFGIMLMETFTG 174
+ Y AP+ G + + ST D++S G + E G
Sbjct: 164 LWYRAPDVLMGSK-KYSTTIDIWSVGCIFAEMVNG 197
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 38/193 (19%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 53 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 108
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 109 LVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 163
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-------DVY 162
+++ + DFG+A+ D MT GY+A + R + N D++
Sbjct: 164 NEDXELKILDFGLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIW 212
Query: 163 SFGIMLMETFTGK 175
S G ++ E TG+
Sbjct: 213 SVGCIMAELLTGR 225
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 28/166 (16%)
Query: 22 ECEMMKSIRHRNLIKVI----SSCSNEEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRL 76
E ++K ++H N+I ++ + S EEF + L ++ L + + D Q L
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFL 126
Query: 77 NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQT 136
+ + L+Y+H SA +IH DLKP N+ ++++ + DFG+A+ D MT
Sbjct: 127 --IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT-- 176
Query: 137 QTLATIGYMAPEYGREGRVSTNG-------DVYSFGIMLMETFTGK 175
GY+A + R + N D++S G ++ E TG+
Sbjct: 177 ------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 38/193 (19%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 48 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 104 LVTHLMGADLNNIVKXQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 158
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-------DVY 162
+++ + DFG+A+ D MT GY+A + R + N D++
Sbjct: 159 NEDCELKILDFGLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 163 SFGIMLMETFTGK 175
S G ++ E TG+
Sbjct: 208 SVGCIMAELLTGR 220
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 38/193 (19%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 53 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 108
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 109 LVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 163
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-------DVY 162
+++ + DFG+A+ D MT GY+A + R + N D++
Sbjct: 164 NEDXELKILDFGLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIW 212
Query: 163 SFGIMLMETFTGK 175
S G ++ E TG+
Sbjct: 213 SVGCIMAELLTGR 225
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 13 GRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDI 72
G + + + E ++K I+H N+I + N+ L+LE + G L +L + +
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE 114
Query: 73 FQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVA----YLSDFGIAKLLIG 128
+ + + + + YLH S + H DLKP+N++L D V + DFG+A +
Sbjct: 115 -EATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-- 168
Query: 129 EDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
D T ++APE + D++S G++ +G P
Sbjct: 169 -DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 13 GRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDI 72
G + + + E ++K I+H N+I + N+ L+LE + G L +L + +
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE 114
Query: 73 FQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVA----YLSDFGIAKLLIG 128
+ + + + + YLH S + H DLKP+N++L D V + DFG+A +
Sbjct: 115 -EATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-- 168
Query: 129 EDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
D T ++APE + D++S G++ +G P
Sbjct: 169 -DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 38/193 (19%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 59 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 114
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 115 LVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 169
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-------DVY 162
+++ + DFG+A+ D MT GY+A + R + N D++
Sbjct: 170 NEDXELKILDFGLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIW 218
Query: 163 SFGIMLMETFTGK 175
S G ++ E TG+
Sbjct: 219 SVGCIMAELLTGR 231
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 19/168 (11%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++K + H N++K+ ++ + LV E G L + S ++ I+
Sbjct: 76 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQ 134
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLL-----DDNLVAYLSDFGIAKLLIGEDQSMTQT 136
V S + Y+H ++H DLKP+N+LL D N+ + DFG++ + S
Sbjct: 135 VLSGITYMH---KNKIVHRDLKPENLLLESKSKDANI--RIIDFGLSTHF---EASKKMK 186
Query: 137 QTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNG 184
+ T Y+APE G DV+S G++L +G P FNG
Sbjct: 187 DKIGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSGCPP----FNG 229
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 87/187 (46%), Gaps = 26/187 (13%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 48 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 158
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIML 168
+++ + DFG+A+ D M T +AT Y APE + D++S G ++
Sbjct: 159 NEDCELKILDFGLAR---HTDDEM--TGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 169 METFTGK 175
E TG+
Sbjct: 214 AELLTGR 220
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 13 GRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDI 72
G + + + E ++K I+H N+I + N+ L+LE + G L +L + +
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE 114
Query: 73 FQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVA----YLSDFGIAKLLIG 128
+ + + + + YLH S + H DLKP+N++L D V + DFG+A +
Sbjct: 115 -EATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-- 168
Query: 129 EDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
D T ++APE + D++S G++ +G P
Sbjct: 169 -DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 13 GRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDI 72
G + + + E ++K I+H N+I + N+ L+LE + G L +L + +
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE 114
Query: 73 FQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVA----YLSDFGIAKLLIG 128
+ + + + + YLH S + H DLKP+N++L D V + DFG+A +
Sbjct: 115 -EATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-- 168
Query: 129 EDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
D T ++APE + D++S G++ +G P
Sbjct: 169 -DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 13 GRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDI 72
G + + + E ++K I+H N+I + N+ L+LE + G L +L + +
Sbjct: 54 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE 113
Query: 73 FQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVA----YLSDFGIAKLLIG 128
+ + + + + YLH S + H DLKP+N++L D V + DFG+A +
Sbjct: 114 -EATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-- 167
Query: 129 EDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
D T ++APE + D++S G++ +G P
Sbjct: 168 -DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 13 GRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDI 72
G + + + E ++K I+H N+I + N+ L+LE + G L +L + +
Sbjct: 54 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE 113
Query: 73 FQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVA----YLSDFGIAKLLIG 128
+ + + + + YLH S + H DLKP+N++L D V + DFG+A +
Sbjct: 114 -EATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-- 167
Query: 129 EDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
D T ++APE + D++S G++ +G P
Sbjct: 168 -DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 13 GRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDI 72
G + + + E ++K I+H N+I + N+ L+LE + G L +L + +
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE 114
Query: 73 FQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVA----YLSDFGIAKLLIG 128
+ + + + + YLH S + H DLKP+N++L D V + DFG+A +
Sbjct: 115 -EATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-- 168
Query: 129 EDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
D T ++APE + D++S G++ +G P
Sbjct: 169 -DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 13 GRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDI 72
G + + + E ++K I+H N+I + N+ L+LE + G L +L + +
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE 114
Query: 73 FQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVA----YLSDFGIAKLLIG 128
+ + + + + YLH S + H DLKP+N++L D V + DFG+A +
Sbjct: 115 -EATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-- 168
Query: 129 EDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
D T ++APE + D++S G++ +G P
Sbjct: 169 -DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 19/168 (11%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++K + H N++K+ ++ + LV E G L + S ++ I+
Sbjct: 99 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQ 157
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLL-----DDNLVAYLSDFGIAKLLIGEDQSMTQT 136
V S + Y+H ++H DLKP+N+LL D N+ + DFG++ + S
Sbjct: 158 VLSGITYMH---KNKIVHRDLKPENLLLESKSKDANI--RIIDFGLSTHF---EASKKMK 209
Query: 137 QTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNG 184
+ T Y+APE G DV+S G++L +G P FNG
Sbjct: 210 DKIGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSGCPP----FNG 252
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 38/193 (19%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 45 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 100
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 101 LVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 155
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-------DVY 162
+++ + DFG+A+ D MT GY+A + R + N D++
Sbjct: 156 NEDCELKILDFGLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIW 204
Query: 163 SFGIMLMETFTGK 175
S G ++ E TG+
Sbjct: 205 SVGCIMAELLTGR 217
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+L+D ++DFG AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GT 201
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Y+AP + D ++ G+++ E G P +
Sbjct: 202 PEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 13 GRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDI 72
G + + + E ++K I+H N+I + N+ L+LE + G L +L + +
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE 114
Query: 73 FQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVA----YLSDFGIAKLLIG 128
+ + + + + YLH S + H DLKP+N++L D V + DFG+A +
Sbjct: 115 -EATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-- 168
Query: 129 EDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
D T ++APE + D++S G++ +G P
Sbjct: 169 -DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 13 GRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDI 72
G + + + E ++K I+H N+I + N+ L+LE + G L +L + +
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE 114
Query: 73 FQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVA----YLSDFGIA-KLLI 127
+ + + + + YLH S + H DLKP+N++L D V + DFG+A K+
Sbjct: 115 -EATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF 170
Query: 128 GEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
G + T ++APE + D++S G++ +G P
Sbjct: 171 GNEFK----NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 19/168 (11%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++K + H N++K+ ++ + LV E G L + S ++ I+
Sbjct: 100 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQ 158
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLL-----DDNLVAYLSDFGIAKLLIGEDQSMTQT 136
V S + Y+H ++H DLKP+N+LL D N+ + DFG++ + S
Sbjct: 159 VLSGITYMH---KNKIVHRDLKPENLLLESKSKDANI--RIIDFGLSTHF---EASKKMK 210
Query: 137 QTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNG 184
+ T Y+APE G DV+S G++L +G P FNG
Sbjct: 211 DKIGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSGCPP----FNG 253
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 13 GRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDI 72
G + + + E ++K I+H N+I + N+ L+LE + G L +L + +
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE 114
Query: 73 FQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVA----YLSDFGIAKLLIG 128
+ + + + + YLH S + H DLKP+N++L D V + DFG+A +
Sbjct: 115 -EATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-- 168
Query: 129 EDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
D T ++APE + D++S G++ +G P
Sbjct: 169 -DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 100/229 (43%), Gaps = 35/229 (15%)
Query: 15 AFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL---EKYLY----SSN 67
+ F E +++ I++ + +N + ++ EYM + S+ ++Y + +
Sbjct: 86 KYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYT 145
Query: 68 CILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 127
C + I I+ V ++ Y+H + H D+KP N+L+D N LSDFG ++ ++
Sbjct: 146 CFIPIQVIKCIIKSVLNSFSYIH--NEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMV 203
Query: 128 GEDQSMTQTQTLATIGYMAPEYGREGRVSTNG---DVYSFGIMLMETFTGKKP------T 178
D+ + ++ T +M PE+ S NG D++S GI L F P
Sbjct: 204 --DKKIKGSR--GTYEFMPPEFF-SNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL 258
Query: 179 YEFFNG--------EMTLKHWVNDWLPISTME-VVDANLLSQEDIHFVA 218
E FN + H++ P++ + N LS EDI F+
Sbjct: 259 VELFNNIRTKNIEYPLDRNHFL---YPLTNKKSTCSNNFLSNEDIDFLK 304
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 38/193 (19%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 44 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 99
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 100 LVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 154
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-------DVY 162
+++ + DFG+A+ D MT GY+A + R + N D++
Sbjct: 155 NEDCELKILDFGLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIW 203
Query: 163 SFGIMLMETFTGK 175
S G ++ E TG+
Sbjct: 204 SVGCIMAELLTGR 216
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 15/170 (8%)
Query: 12 CGRAFKSFDVECEMMKSIRHRNLI---KVISSCSNEEFKAL-VLEYMPHGSLEKYLYSSN 67
C R + E +++ RH N+I +I + + E+ K + +++ + L K L + +
Sbjct: 69 CQRTLR----EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH 124
Query: 68 CILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 127
D + + L+Y+H SA V+H DLKP N+LL+ + DFG+A++
Sbjct: 125 LSND--HICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179
Query: 128 GE-DQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGK 175
+ D + + +AT Y APE + T D++S G +L E + +
Sbjct: 180 PDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 15/170 (8%)
Query: 12 CGRAFKSFDVECEMMKSIRHRNLI---KVISSCSNEEFKAL-VLEYMPHGSLEKYLYSSN 67
C R + E +++ RH N+I +I + + E+ K + +++ + L K L + +
Sbjct: 70 CQRTLR----EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH 125
Query: 68 CILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 127
D + + L+Y+H SA V+H DLKP N+LL+ + DFG+A++
Sbjct: 126 LSND--HICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 180
Query: 128 GE-DQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGK 175
+ D + + +AT Y APE + T D++S G +L E + +
Sbjct: 181 PDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 38/193 (19%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 48 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 158
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-------DVY 162
+++ + DFG+A+ D MT GY+A + R + N D++
Sbjct: 159 NEDCELKILDFGLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 163 SFGIMLMETFTGK 175
S G ++ E TG+
Sbjct: 208 SVGCIMAELLTGR 220
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 38/193 (19%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 45 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 100
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 101 LVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 155
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-------DVY 162
+++ + DFG+A+ D MT GY+A + R + N D++
Sbjct: 156 NEDCELKILDFGLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIW 204
Query: 163 SFGIMLMETFTGK 175
S G ++ E TG+
Sbjct: 205 SVGCIMAELLTGR 217
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 84/220 (38%), Gaps = 37/220 (16%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLN---- 77
E ++ RHRN++ + S + E ++ E++ LDIF+R+N
Sbjct: 51 EISILNIARHRNILHLHESFESMEELVMIFEFISG-------------LDIFERINTSAF 97
Query: 78 ------IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS--DFGIAKLLIGE 129
I+ V E L F S + H D++P+N++ + + +FG A+ L
Sbjct: 98 ELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG 157
Query: 130 DQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP---------TYE 180
D Y APE + VST D++S G ++ +G P
Sbjct: 158 DNFRL---LFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIEN 214
Query: 181 FFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKE 220
N E T + I M+ VD L+ + A E
Sbjct: 215 IMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASE 254
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 38/193 (19%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 48 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 158
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-------DVY 162
+++ + DFG+A+ D MT GY+A + R + N D++
Sbjct: 159 NEDCELKILDFGLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 163 SFGIMLMETFTGK 175
S G ++ E TG+
Sbjct: 208 SVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 38/193 (19%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 48 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 158
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-------DVY 162
+++ + DFG+A+ D MT GY+A + R + N D++
Sbjct: 159 NEDCELKILDFGLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 163 SFGIMLMETFTGK 175
S G ++ E TG+
Sbjct: 208 SVGCIMAELLTGR 220
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 6/155 (3%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++K + H N++K++ E LV E++ L+K++ +S + I L I
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDAS-ALTGIPLPL-IKSY 111
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ L+ L F S V+H DLKP N+L++ L+DFG+A+ T + T
Sbjct: 112 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 169
Query: 142 IGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTGK 175
+ Y APE + ST D++S G + E T +
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 38/193 (19%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 55 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 110
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 111 LVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 165
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-------DVY 162
+++ + DFG+A+ D MT GY+A + R + N D++
Sbjct: 166 NEDCELKILDFGLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIW 214
Query: 163 SFGIMLMETFTGK 175
S G ++ E TG+
Sbjct: 215 SVGCIMAELLTGR 227
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 38/193 (19%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 53 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 108
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 109 LVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 163
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-------DVY 162
+++ + DFG+A+ D MT GY+A + R + N D++
Sbjct: 164 NEDCELKILDFGLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIW 212
Query: 163 SFGIMLMETFTGK 175
S G ++ E TG+
Sbjct: 213 SVGCIMAELLTGR 225
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 38/193 (19%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 50 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 105
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 106 LVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 160
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-------DVY 162
+++ + DFG+A+ D MT GY+A + R + N D++
Sbjct: 161 NEDCELKILDFGLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIW 209
Query: 163 SFGIMLMETFTGK 175
S G ++ E TG+
Sbjct: 210 SVGCIMAELLTGR 222
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 13 GRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDI 72
G + + + E ++K I+H N+I + N+ L+LE + G L +L + +
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE 114
Query: 73 FQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVA----YLSDFGIAKLLIG 128
+ + + + + YLH S + H DLKP+N++L D V + DFG+A +
Sbjct: 115 -EATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-- 168
Query: 129 EDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
D T ++APE + D++S G++ +G P
Sbjct: 169 -DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 38/193 (19%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 46 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 101
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 102 LVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 156
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-------DVY 162
+++ + DFG+A+ D MT GY+A + R + N D++
Sbjct: 157 NEDCELKILDFGLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIW 205
Query: 163 SFGIMLMETFTGK 175
S G ++ E TG+
Sbjct: 206 SVGCIMAELLTGR 218
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 79/179 (44%), Gaps = 8/179 (4%)
Query: 1 MEVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLE 60
+++A K+ + + + E +M + H NLI++ + ++ LV+EY+ G L
Sbjct: 115 LKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELF 174
Query: 61 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL--DDNLVAYLS 118
+ + L + M + + ++H ++H DLKP+N+L D +
Sbjct: 175 DRIIDESYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKII 231
Query: 119 DFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
DFG+A+ ++ T ++APE VS D++S G++ +G P
Sbjct: 232 DFGLARRYKPREKLKV---NFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSP 287
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 28/166 (16%)
Query: 22 ECEMMKSIRHRNLIKVI----SSCSNEEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRL 76
E ++K ++H N+I ++ + S EEF + L ++ L + D Q L
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 126
Query: 77 NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQT 136
+ + L+Y+H SA +IH DLKP N+ ++++ + DFG+A+ D MT
Sbjct: 127 --IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT-- 176
Query: 137 QTLATIGYMAPEYGREGRVSTNG-------DVYSFGIMLMETFTGK 175
GY+A + R + N D++S G ++ E TG+
Sbjct: 177 ------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 29/168 (17%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLN---- 77
E ++K + H N++K+ ++ LV+E G L +I R+
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGEL---------FDEIIHRMKFNEV 136
Query: 78 ----IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLD----DNLVAYLSDFGIAKLLIGE 129
I+ V S + YLH ++H DLKP+N+LL+ D L+ + DFG++ + E
Sbjct: 137 DAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIK-IVDFGLSAVF--E 190
Query: 130 DQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
+Q + + L T Y+APE R+ + DV+S G++L G P
Sbjct: 191 NQKKMK-ERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPP 236
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 38/193 (19%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 48 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 158
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-------DVY 162
+++ + DFG+A+ D MT GY+A + R + N D++
Sbjct: 159 NEDCELKILDFGLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 163 SFGIMLMETFTGK 175
S G ++ E TG+
Sbjct: 208 SVGCIMAELLTGR 220
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 81/173 (46%), Gaps = 23/173 (13%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFK----ALVLEYMPHGSLEKYLYSSNCILDIFQRLN 77
E +++K +H N+I + + + F+ +++ + L + + + D Q
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYF- 117
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL----------I 127
+ A++ LH + VIH DLKP N+L++ N + DFG+A+++
Sbjct: 118 -IYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPT 173
Query: 128 GEDQSMTQTQTLATIGYMAPEYG-REGRVSTNGDVYSFGIMLMETFTGKKPTY 179
G+ M T+ +AT Y APE + S DV+S G +L E F ++P +
Sbjct: 174 GQQSGM--TEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIF 223
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 38/193 (19%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 48 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 158
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-------DVY 162
+++ + DFG+A+ D MT GY+A + R + N D++
Sbjct: 159 NEDCELKILDFGLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 163 SFGIMLMETFTGK 175
S G ++ E TG+
Sbjct: 208 SVGCIMAELLTGR 220
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 38/193 (19%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 54 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 109
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 110 LVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 164
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-------DVY 162
+++ + DFG+A+ D MT GY+A + R + N D++
Sbjct: 165 NEDCELKILDFGLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIW 213
Query: 163 SFGIMLMETFTGK 175
S G ++ E TG+
Sbjct: 214 SVGCIMAELLTGR 226
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 26/187 (13%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 55 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 110
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 111 LVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 165
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIML 168
+++ + DFG+A+ E T +AT Y APE + D++S G ++
Sbjct: 166 NEDCELKILDFGLARHTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 220
Query: 169 METFTGK 175
E TG+
Sbjct: 221 AELLTGR 227
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 38/193 (19%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 48 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 158
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-------DVY 162
+++ + DFG+A+ D MT GY+A + R + N D++
Sbjct: 159 NEDCELKILDFGLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 163 SFGIMLMETFTGK 175
S G ++ E TG+
Sbjct: 208 SVGCIMAELLTGR 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 38/193 (19%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 48 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 158
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-------DVY 162
+++ + DFG+A+ D MT GY+A + R + N D++
Sbjct: 159 NEDCELKILDFGLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 163 SFGIMLMETFTGK 175
S G ++ E TG+
Sbjct: 208 SVGCIMAELLTGR 220
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 26/187 (13%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 55 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 110
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 111 LVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 165
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIML 168
+++ + DFG+A+ E T +AT Y APE + D++S G ++
Sbjct: 166 NEDCELKILDFGLARHTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 220
Query: 169 METFTGK 175
E TG+
Sbjct: 221 AELLTGR 227
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 38/193 (19%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 71 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 126
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 127 LVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 181
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-------DVY 162
+++ + DFG+A+ D MT GY+A + R + N D++
Sbjct: 182 NEDCELKILDFGLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIW 230
Query: 163 SFGIMLMETFTGK 175
S G ++ E TG+
Sbjct: 231 SVGCIMAELLTGR 243
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 38/193 (19%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 54 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 109
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 110 LVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 164
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-------DVY 162
+++ + DFG+A+ D MT GY+A + R + N D++
Sbjct: 165 NEDCELKILDFGLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIW 213
Query: 163 SFGIMLMETFTGK 175
S G ++ E TG+
Sbjct: 214 SVGCIMAELLTGR 226
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 38/193 (19%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 48 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + S D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 104 LVTHLMGADLNNIVKSQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 158
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-------DVY 162
+++ + DFG+ + D MT GY+A + R + N D++
Sbjct: 159 NEDSELKILDFGLCR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 163 SFGIMLMETFTGK 175
S G ++ E TG+
Sbjct: 208 SVGCIMAELLTGR 220
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 26/187 (13%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 55 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 110
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 111 LVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 165
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIML 168
+++ + DFG+A+ E T +AT Y APE + D++S G ++
Sbjct: 166 NEDCELKILDFGLARHTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 220
Query: 169 METFTGK 175
E TG+
Sbjct: 221 AELLTGR 227
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 38/193 (19%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 60 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 115
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 116 LVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 170
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-------DVY 162
+++ + DFG+A+ D MT GY+A + R + N D++
Sbjct: 171 NEDCELKILDFGLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIW 219
Query: 163 SFGIMLMETFTGK 175
S G ++ E TG+
Sbjct: 220 SVGCIMAELLTGR 232
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 38/193 (19%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 50 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 105
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 106 LVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 160
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-------DVY 162
+++ + DFG+A+ D MT GY+A + R + N D++
Sbjct: 161 NEDCELKILDFGLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIW 209
Query: 163 SFGIMLMETFTGK 175
S G ++ E TG+
Sbjct: 210 SVGCIMAELLTGR 222
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 9/105 (8%)
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDD---NLVAYLSDFGIAKLLIGEDQSMT 134
IM + A++YLH S + H D+KP+N+L N + L+DFG AK + +
Sbjct: 127 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---S 180
Query: 135 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
T T Y+APE + + D++S G+++ G P Y
Sbjct: 181 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY 225
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 38/193 (19%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 60 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 115
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 116 LVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 170
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-------DVY 162
+++ + DFG+A+ D MT GY+A + R + N D++
Sbjct: 171 NEDCELKILDFGLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIW 219
Query: 163 SFGIMLMETFTGK 175
S G ++ E TG+
Sbjct: 220 SVGCIMAELLTGR 232
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 38/193 (19%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 67 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 122
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 123 LVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 177
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-------DVY 162
+++ + DFG+A+ D MT GY+A + R + N D++
Sbjct: 178 NEDCELKILDFGLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIW 226
Query: 163 SFGIMLMETFTGK 175
S G ++ E TG+
Sbjct: 227 SVGCIMAELLTGR 239
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 38/193 (19%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 53 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 108
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 109 LVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 163
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-------DVY 162
+++ + DFG+A+ D MT GY+A + R + N D++
Sbjct: 164 NEDCELKILDFGLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIW 212
Query: 163 SFGIMLMETFTGK 175
S G ++ E TG+
Sbjct: 213 SVGCIMAELLTGR 225
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 28/166 (16%)
Query: 22 ECEMMKSIRHRNLIKVI----SSCSNEEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRL 76
E ++K ++H N+I ++ + S EEF + L ++ L + D Q L
Sbjct: 82 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 141
Query: 77 NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQT 136
+ + L+Y+H SA +IH DLKP N+ ++++ + DFG+A+ D MT
Sbjct: 142 --IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT-- 191
Query: 137 QTLATIGYMAPEYGREGRVSTNG-------DVYSFGIMLMETFTGK 175
GY+A + R + N D++S G ++ E TG+
Sbjct: 192 ------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 38/193 (19%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 47 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 102
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 103 LVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 157
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-------DVY 162
+++ + DFG+A+ D MT GY+A + R + N D++
Sbjct: 158 NEDCELKILDFGLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIW 206
Query: 163 SFGIMLMETFTGK 175
S G ++ E TG+
Sbjct: 207 SVGCIMAELLTGR 219
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 85/187 (45%), Gaps = 24/187 (12%)
Query: 11 QCGRAFKSFDVECEMMKSIRHRNLIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLY 64
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 66 HAKRAYR----ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI- 119
Query: 65 SSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 124
LD + ++ + +++LH SA +IH DLKP N+++ + + DFG+A+
Sbjct: 120 --QMELDHERMSYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Query: 125 LLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNG 184
S T + T Y APE N D++S G ++ E K F G
Sbjct: 175 ---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPG 227
Query: 185 EMTLKHW 191
+ W
Sbjct: 228 RDYIDQW 234
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 9/105 (8%)
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDD---NLVAYLSDFGIAKLLIGEDQSMT 134
IM + A++YLH S + H D+KP+N+L N + L+DFG AK + +
Sbjct: 126 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---S 179
Query: 135 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
T T Y+APE + + D++S G+++ G P Y
Sbjct: 180 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY 224
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 28/166 (16%)
Query: 22 ECEMMKSIRHRNLIKVI----SSCSNEEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRL 76
E ++K ++H N+I ++ + S EEF + L ++ L + D Q L
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 77 NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQT 136
+ + L+Y+H SA +IH DLKP N+ ++++ + DFG+A+ D MT
Sbjct: 131 --IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT-- 180
Query: 137 QTLATIGYMAPEYGREGRVSTNG-------DVYSFGIMLMETFTGK 175
GY+A + R + N D++S G ++ E TG+
Sbjct: 181 ------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 28/166 (16%)
Query: 22 ECEMMKSIRHRNLIKVI----SSCSNEEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRL 76
E ++K ++H N+I ++ + S EEF + L ++ L + D Q L
Sbjct: 81 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 140
Query: 77 NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQT 136
+ + L+Y+H SA +IH DLKP N+ ++++ + DFG+A+ D MT
Sbjct: 141 --IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT-- 190
Query: 137 QTLATIGYMAPEYGREGRVSTNG-------DVYSFGIMLMETFTGK 175
GY+A + R + N D++S G ++ E TG+
Sbjct: 191 ------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 26/165 (15%)
Query: 22 ECEMMKSIRHRNLIKVI----SSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLN 77
E ++K ++H N+I ++ + S E+F + L G+ + + D +
Sbjct: 69 ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF- 127
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQ 137
++ + L+Y+H SA +IH DLKP NV ++++ + DFG+A+ D+ MT
Sbjct: 128 LVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLAR---QADEEMT--- 178
Query: 138 TLATIGYMAPEYGREGRVSTNG-------DVYSFGIMLMETFTGK 175
GY+A + R + N D++S G ++ E GK
Sbjct: 179 -----GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 17/187 (9%)
Query: 1 MEVAVKVFNLQCGRAFK------SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYM 54
+E A K + RA + + E +++ + H N+I + N L+LE +
Sbjct: 38 LEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELV 97
Query: 55 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNV-LLDDNL 113
G L +L + + + + + + + YLH + + H DLKP+N+ LLD N+
Sbjct: 98 SGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNI 153
Query: 114 V---AYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLME 170
L DFG+A + + + T ++APE + D++S G++
Sbjct: 154 PIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI 210
Query: 171 TFTGKKP 177
+G P
Sbjct: 211 LLSGASP 217
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 38/193 (19%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 54 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 109
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 110 LVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 164
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-------DVY 162
+++ + DFG+A+ D MT GY+A + R + N D++
Sbjct: 165 NEDSELKILDFGLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIW 213
Query: 163 SFGIMLMETFTGK 175
S G ++ E TG+
Sbjct: 214 SVGCIMAELLTGR 226
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 80/180 (44%), Gaps = 16/180 (8%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +M + H LI + + ++ L+LE++ G L + + + + + +N M
Sbjct: 98 EISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQ 157
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS--DFGIAKLLIGEDQSMTQTQTL 139
L+++H ++H D+KP+N++ + + + DFG+A L ++ T
Sbjct: 158 ACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKV---TT 211
Query: 140 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVN----DW 195
AT + APE V D+++ G++ +G P F GE L+ N DW
Sbjct: 212 ATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSP----FAGEDDLETLQNVKRCDW 267
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 9/105 (8%)
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDD---NLVAYLSDFGIAKLLIGEDQSMT 134
IM + A++YLH S + H D+KP+N+L N + L+DFG AK + +
Sbjct: 121 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---S 174
Query: 135 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
T T Y+APE + + D++S G+++ G P Y
Sbjct: 175 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY 219
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 28/166 (16%)
Query: 22 ECEMMKSIRHRNLIKVI----SSCSNEEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRL 76
E ++K ++H N+I ++ + S EEF + L ++ L + D Q L
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 142
Query: 77 NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQT 136
+ + L+Y+H SA +IH DLKP N+ ++++ + DFG+A+ D MT
Sbjct: 143 --IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT-- 192
Query: 137 QTLATIGYMAPEYGREGRVSTNG-------DVYSFGIMLMETFTGK 175
GY+A + R + N D++S G ++ E TG+
Sbjct: 193 ------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 38/193 (19%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 50 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 105
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 106 LVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 160
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-------DVY 162
+++ + DFG+A+ D MT GY+A + R + N D++
Sbjct: 161 NEDCELKILDFGLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIW 209
Query: 163 SFGIMLMETFTGK 175
S G ++ E TG+
Sbjct: 210 SVGCIMAELLTGR 222
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 16/155 (10%)
Query: 29 IRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 88
+ RN +K ++ + + EY + +L ++S N + + + AL Y
Sbjct: 72 LERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSY 131
Query: 89 LHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK-------LLIGEDQSMTQ-----T 136
+H S +IH +LKP N+ +D++ + DFG+AK +L + Q++ T
Sbjct: 132 IH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLT 188
Query: 137 QTLATIGYMAPE-YGREGRVSTNGDVYSFGIMLME 170
+ T Y+A E G + D YS GI+ E
Sbjct: 189 SAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 9/105 (8%)
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDD---NLVAYLSDFGIAKLLIGEDQSMT 134
IM + A++YLH S + H D+KP+N+L N + L+DFG AK + +
Sbjct: 128 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---S 181
Query: 135 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
T T Y+APE + + D++S G+++ G P Y
Sbjct: 182 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY 226
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 28/166 (16%)
Query: 22 ECEMMKSIRHRNLIKVI----SSCSNEEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRL 76
E ++K ++H N+I ++ + S EEF + L ++ L + D Q L
Sbjct: 100 ELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 159
Query: 77 NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQT 136
+ + L+Y+H SA +IH DLKP N+ ++++ + DFG+A+ D MT
Sbjct: 160 --IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT-- 209
Query: 137 QTLATIGYMAPEYGREGRVSTNG-------DVYSFGIMLMETFTGK 175
GY+A + R + N D++S G ++ E TG+
Sbjct: 210 ------GYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 28/166 (16%)
Query: 22 ECEMMKSIRHRNLIKVI----SSCSNEEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRL 76
E ++K ++H N+I ++ + S EEF + L ++ L + D Q L
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 150
Query: 77 NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQT 136
+ + L+Y+H SA +IH DLKP N+ ++++ + DFG+A+ D MT
Sbjct: 151 --IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT-- 200
Query: 137 QTLATIGYMAPEYGREGRVSTNG-------DVYSFGIMLMETFTGK 175
GY+A + R + N D++S G ++ E TG+
Sbjct: 201 ------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 38/193 (19%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 68 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 123
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 124 LVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 178
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-------DVY 162
+++ + DFG+A+ D MT GY+A + R + N D++
Sbjct: 179 NEDCELKILDFGLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIW 227
Query: 163 SFGIMLMETFTGK 175
S G ++ E TG+
Sbjct: 228 SVGCIMAELLTGR 240
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 9/105 (8%)
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDD---NLVAYLSDFGIAKLLIGEDQSMT 134
IM + A++YLH S + H D+KP+N+L N + L+DFG AK + +
Sbjct: 120 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---S 173
Query: 135 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
T T Y+APE + + D++S G+++ G P Y
Sbjct: 174 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY 218
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 38/193 (19%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 50 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 105
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 106 LVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 160
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-------DVY 162
+++ + DFG+A+ D MT GY+A + R + N D++
Sbjct: 161 NEDSELKILDFGLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIW 209
Query: 163 SFGIMLMETFTGK 175
S G ++ E TG+
Sbjct: 210 SVGCIMAELLTGR 222
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 28/166 (16%)
Query: 22 ECEMMKSIRHRNLIKVI----SSCSNEEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRL 76
E ++K ++H N+I ++ + S EEF + L ++ L + D Q L
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 136
Query: 77 NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQT 136
+ + L+Y+H SA +IH DLKP N+ ++++ + DFG+A+ D MT
Sbjct: 137 --IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT-- 186
Query: 137 QTLATIGYMAPEYGREGRVSTNG-------DVYSFGIMLMETFTGK 175
GY+A + R + N D++S G ++ E TG+
Sbjct: 187 ------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 9/105 (8%)
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDD---NLVAYLSDFGIAKLLIGEDQSMT 134
IM + A++YLH S + H D+KP+N+L N + L+DFG AK + +
Sbjct: 122 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---S 175
Query: 135 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
T T Y+APE + + D++S G+++ G P Y
Sbjct: 176 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY 220
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 28/166 (16%)
Query: 22 ECEMMKSIRHRNLIKVI----SSCSNEEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRL 76
E ++K ++H N+I ++ + S EEF + L ++ L + D Q L
Sbjct: 90 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 149
Query: 77 NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQT 136
+ + L+Y+H SA +IH DLKP N+ ++++ + DFG+A+ D MT
Sbjct: 150 --IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMT-- 199
Query: 137 QTLATIGYMAPEYGREGRVSTNG-------DVYSFGIMLMETFTGK 175
GY+A + R + N D++S G ++ E TG+
Sbjct: 200 ------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 17/187 (9%)
Query: 1 MEVAVKVFNLQCGRAFK------SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYM 54
+E A K + RA + + E +++ + H N+I + N L+LE +
Sbjct: 38 LEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELV 97
Query: 55 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNV-LLDDNL 113
G L +L + + + + + + + YLH + + H DLKP+N+ LLD N+
Sbjct: 98 SGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNI 153
Query: 114 V---AYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLME 170
L DFG+A + + + T ++APE + D++S G++
Sbjct: 154 PIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI 210
Query: 171 TFTGKKP 177
+G P
Sbjct: 211 LLSGASP 217
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 9/105 (8%)
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDD---NLVAYLSDFGIAKLLIGEDQSMT 134
IM + A++YLH S + H D+KP+N+L N + L+DFG AK + +
Sbjct: 166 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---S 219
Query: 135 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
T T Y+APE + + D++S G+++ G P Y
Sbjct: 220 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY 264
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 9/105 (8%)
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDD---NLVAYLSDFGIAKLLIGEDQSMT 134
IM + A++YLH S + H D+KP+N+L N + L+DFG AK + +
Sbjct: 172 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---S 225
Query: 135 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
T T Y+APE + + D++S G+++ G P Y
Sbjct: 226 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY 270
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 85/187 (45%), Gaps = 24/187 (12%)
Query: 11 QCGRAFKSFDVECEMMKSIRHRNLIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLY 64
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 66 HAKRAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQ 120
Query: 65 SSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 124
LD + ++ + +++LH SA +IH DLKP N+++ + + DFG+A+
Sbjct: 121 ME---LDHERMSYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Query: 125 LLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNG 184
S T + T Y APE N D++S G ++ E K F G
Sbjct: 175 ---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPG 227
Query: 185 EMTLKHW 191
+ W
Sbjct: 228 RDYIDQW 234
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 85/187 (45%), Gaps = 24/187 (12%)
Query: 11 QCGRAFKSFDVECEMMKSIRHRNLIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLY 64
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 66 HAKRAYR----ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQ 120
Query: 65 SSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 124
LD + ++ + +++LH SA +IH DLKP N+++ + + DFG+A+
Sbjct: 121 ME---LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Query: 125 LLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNG 184
S T + T Y APE N D++S G ++ E K F G
Sbjct: 175 ---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPG 227
Query: 185 EMTLKHW 191
+ W
Sbjct: 228 RDYIDQW 234
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 9/105 (8%)
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDD---NLVAYLSDFGIAKLLIGEDQSMT 134
IM + A++YLH S + H D+KP+N+L N + L+DFG AK + +
Sbjct: 122 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---S 175
Query: 135 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
T T Y+APE + + D++S G+++ G P Y
Sbjct: 176 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY 220
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 85/187 (45%), Gaps = 24/187 (12%)
Query: 11 QCGRAFKSFDVECEMMKSIRHRNLIKVISSCSN----EEFK--ALVLEYMPHGSLEKYLY 64
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 59 HAKRAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQ 113
Query: 65 SSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 124
LD + ++ + +++LH SA +IH DLKP N+++ + + DFG+A+
Sbjct: 114 ME---LDHERMSYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 167
Query: 125 LLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNG 184
S T + T Y APE N D++S G ++ E K F G
Sbjct: 168 ---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPG 220
Query: 185 EMTLKHW 191
+ W
Sbjct: 221 RDYIDQW 227
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 81/173 (46%), Gaps = 23/173 (13%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFK----ALVLEYMPHGSLEKYLYSSNCILDIFQRLN 77
E +++K +H N+I + + + F+ +++ + L + + + D Q
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYF- 117
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL----------I 127
+ A++ LH + VIH DLKP N+L++ N + DFG+A+++
Sbjct: 118 -IYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPT 173
Query: 128 GEDQSMTQTQTLATIGYMAPEYG-REGRVSTNGDVYSFGIMLMETFTGKKPTY 179
G+ M T+ +AT Y APE + S DV+S G +L E F ++P +
Sbjct: 174 GQQSGM--TEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIF 223
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 9/158 (5%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++++ L+K+ S + +V+EY+ G + +L + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQ 149
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ EYLH S +I+ DLKP+N+L+D ++DFG AK + G + T
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEA-- 204
Query: 142 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
+APE + D ++ G+++ E G P +
Sbjct: 205 ---LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 9/105 (8%)
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDD---NLVAYLSDFGIAKLLIGEDQSMT 134
IM + A++YLH S + H D+KP+N+L N + L+DFG AK + +
Sbjct: 136 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---S 189
Query: 135 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
T T Y+APE + + D++S G+++ G P Y
Sbjct: 190 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY 234
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 17/187 (9%)
Query: 1 MEVAVKVFNLQCGRAFK------SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYM 54
+E A K + RA + + E +++ + H N+I + N L+LE +
Sbjct: 38 LEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELV 97
Query: 55 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNV-LLDDNL 113
G L +L + + + + + + + YLH + + H DLKP+N+ LLD N+
Sbjct: 98 SGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNI 153
Query: 114 V---AYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLME 170
L DFG+A + + + T ++APE + D++S G++
Sbjct: 154 PIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI 210
Query: 171 TFTGKKP 177
+G P
Sbjct: 211 LLSGASP 217
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 20/170 (11%)
Query: 11 QCGRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKA--LVLEYMPHGSLEKYLY 64
RA++ E +MK + H+N+I +++ S EEF+ +V+E M +L + +
Sbjct: 66 HAKRAYR----ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI- 119
Query: 65 SSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 124
LD + ++ + +++LH SA +IH DLKP N+++ + + DFG+A+
Sbjct: 120 --QMELDHERMSYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
Query: 125 LLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTG 174
S T + T Y APE N D++S G ++ E G
Sbjct: 175 T---AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 17/187 (9%)
Query: 1 MEVAVKVFNLQCGRAFK------SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYM 54
+E A K + RA + + E +++ + H N+I + N L+LE +
Sbjct: 38 LEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELV 97
Query: 55 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNV-LLDDNL 113
G L +L + + + + + + + YLH + + H DLKP+N+ LLD N+
Sbjct: 98 SGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNI 153
Query: 114 V---AYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLME 170
L DFG+A + + + T ++APE + D++S G++
Sbjct: 154 PIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI 210
Query: 171 TFTGKKP 177
+G P
Sbjct: 211 LLSGASP 217
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVLL---DDNLVAYLSDFGIAKLLIGEDQSMT 134
IM D+ +A+++LH S + H D+KP+N+L + + V L+DFG AK Q+
Sbjct: 114 IMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT---QNAL 167
Query: 135 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
QT T Y+APE + + D++S G+++ G P Y
Sbjct: 168 QTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFY 211
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 26/165 (15%)
Query: 22 ECEMMKSIRHRNLIKVI----SSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLN 77
E ++K ++H N+I ++ + S E+F + L G+ + + D +
Sbjct: 77 ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF- 135
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQ 137
++ + L+Y+H SA +IH DLKP NV ++++ + DFG+A+ D+ MT
Sbjct: 136 LVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR---QADEEMT--- 186
Query: 138 TLATIGYMAPEYGREGRVSTNG-------DVYSFGIMLMETFTGK 175
GY+A + R + N D++S G ++ E GK
Sbjct: 187 -----GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVLL---DDNLVAYLSDFGIAKLLIGEDQSMT 134
IM D+ +A+++LH S + H D+KP+N+L + + V L+DFG AK Q+
Sbjct: 133 IMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT---QNAL 186
Query: 135 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
QT T Y+APE + + D++S G+++ G P Y
Sbjct: 187 QTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFY 230
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 17/187 (9%)
Query: 1 MEVAVKVFNLQCGRAFK------SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYM 54
+E A K + RA + + E +++ + H N+I + N L+LE +
Sbjct: 38 LEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELV 97
Query: 55 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNV-LLDDNL 113
G L +L + + + + + + + YLH + + H DLKP+N+ LLD N+
Sbjct: 98 SGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNI 153
Query: 114 V---AYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLME 170
L DFG+A + + + T ++APE + D++S G++
Sbjct: 154 PIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI 210
Query: 171 TFTGKKP 177
+G P
Sbjct: 211 LLSGASP 217
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 20/170 (11%)
Query: 11 QCGRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKA--LVLEYMPHGSLEKYLY 64
RA++ E +MK + H+N+I +++ S EEF+ +V+E M +L + +
Sbjct: 66 HAKRAYR----ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI- 119
Query: 65 SSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 124
LD + ++ + +++LH SA +IH DLKP N+++ + + DFG+A+
Sbjct: 120 --QMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
Query: 125 LLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTG 174
S T + T Y APE N D++S G ++ E G
Sbjct: 175 T---AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 73/162 (45%), Gaps = 26/162 (16%)
Query: 27 KSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL-----YSSNCILDIFQRLNIMID 81
+S+RH N+++ A+V+EY G L + + +S + FQ+L
Sbjct: 69 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL----- 123
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS--DFGIAKLLIGEDQSMTQTQTL 139
S + Y H + V H DLK +N LLD + L DFG +K + Q + T+
Sbjct: 124 -ISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS---TV 176
Query: 140 ATIGYMAPEY----GREGRVSTNGDVYSFGIMLMETFTGKKP 177
T Y+APE +G+V+ DV+S G+ L G P
Sbjct: 177 GTPAYIAPEVLLKKEYDGKVA---DVWSCGVTLYVMLVGAYP 215
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 21/164 (12%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLN---I 78
E ++K + H N++K+ ++ LV+E G L + + F ++ I
Sbjct: 54 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGEL----FDEIILRQKFSEVDAAVI 109
Query: 79 MIDVASALEYLHFGCSAPVIHCDLKPDNVLLD----DNLVAYLSDFGI-AKLLIGEDQSM 133
M V S YLH ++H DLKP+N+LL+ D L+ + DFG+ A +G
Sbjct: 110 MKQVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIK-IVDFGLSAHFEVG----G 161
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
+ L T Y+APE R+ + DV+S G++L G P
Sbjct: 162 KMKERLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPP 204
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 21/164 (12%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLN---I 78
E ++K + H N++K+ ++ LV+E G L + + F ++ I
Sbjct: 71 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGEL----FDEIILRQKFSEVDAAVI 126
Query: 79 MIDVASALEYLHFGCSAPVIHCDLKPDNVLLD----DNLVAYLSDFGI-AKLLIGEDQSM 133
M V S YLH ++H DLKP+N+LL+ D L+ + DFG+ A +G
Sbjct: 127 MKQVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIK-IVDFGLSAHFEVGG---- 178
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
+ L T Y+APE R+ + DV+S G++L G P
Sbjct: 179 KMKERLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPP 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 20/170 (11%)
Query: 11 QCGRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKA--LVLEYMPHGSLEKYLY 64
RA++ E +MK + H+N+I +++ S EEF+ +V+E M +L + +
Sbjct: 66 HAKRAYR----ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQ 120
Query: 65 SSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 124
LD + ++ + +++LH SA +IH DLKP N+++ + + DFG+A+
Sbjct: 121 ME---LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
Query: 125 LLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTG 174
S T + T Y APE N D++S G ++ E G
Sbjct: 175 T---AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 6/155 (3%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++K + H N++K++ E LV E++ S++ + L I
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSY 110
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ L+ L F S V+H DLKP N+L++ L+DFG+A+ T + T
Sbjct: 111 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 168
Query: 142 IGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTGK 175
+ Y APE + ST D++S G + E T +
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 26/162 (16%)
Query: 27 KSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL-----YSSNCILDIFQRLNIMID 81
+S+RH N+++ A+V+EY G L + + +S + FQ+L +
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVS 129
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYL--SDFGIAKLLIGEDQSMTQTQTL 139
A A++ V H DLK +N LLD + L +DFG +K + Q + +
Sbjct: 130 YAHAMQ---------VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKS---AV 177
Query: 140 ATIGYMAPEY----GREGRVSTNGDVYSFGIMLMETFTGKKP 177
T Y+APE +G+V+ DV+S G+ L G P
Sbjct: 178 GTPAYIAPEVLLKKEYDGKVA---DVWSCGVTLYVMLVGAYP 216
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 10/137 (7%)
Query: 49 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVL 108
V+EY+ G L ++ + F+ + + A L F S +I+ DLK DNV+
Sbjct: 419 FVMEYVNGGDLMYHIQQ----VGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVM 474
Query: 109 LDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML 168
LD ++DFG+ K I + +T T Y+APE + D ++FG++L
Sbjct: 475 LDSEGHIKIADFGMCKENIWD--GVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLL 532
Query: 169 METFTGKKPTYEFFNGE 185
E G+ P F GE
Sbjct: 533 YEMLAGQAP----FEGE 545
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 6/155 (3%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E ++K + H N++K++ E LV E++ S++ + L I
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSY 111
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLAT 141
+ L+ L F S V+H DLKP N+L++ L+DFG+A+ T + T
Sbjct: 112 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 169
Query: 142 IGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTGK 175
+ Y APE + ST D++S G + E T +
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 18/152 (11%)
Query: 77 NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQT 136
I + + ALE+LH S VIH D+KP NVL++ + DFGI+ L+ + + +
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDD---VAKD 167
Query: 137 QTLATIGYMA-----PEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHW 191
YMA PE ++G S D++S GI ++E + P + LK
Sbjct: 168 IDAGCKPYMAPERINPELNQKG-YSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV 226
Query: 192 VNDWLPISTMEVVDANLLSQEDIHFVAKEQCV 223
V + P + A+ S E + F + QC+
Sbjct: 227 VEEPSP-----QLPADKFSAEFVDFTS--QCL 251
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 73/162 (45%), Gaps = 26/162 (16%)
Query: 27 KSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL-----YSSNCILDIFQRLNIMID 81
+S+RH N+++ A+V+EY G L + + +S + FQ+L
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL----- 124
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS--DFGIAKLLIGEDQSMTQTQTL 139
S + Y H + V H DLK +N LLD + L DFG +K + Q + T+
Sbjct: 125 -ISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS---TV 177
Query: 140 ATIGYMAPEY----GREGRVSTNGDVYSFGIMLMETFTGKKP 177
T Y+APE +G+V+ DV+S G+ L G P
Sbjct: 178 GTPAYIAPEVLLKKEYDGKVA---DVWSCGVTLYVMLVGAYP 216
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 97/238 (40%), Gaps = 44/238 (18%)
Query: 31 HRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLY----------SSNCILDIFQRL---- 76
H N++ ++ +C+ ++ EY +G L +L +S I++ +
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 77 ---NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSM 133
+ VA + +L S IH DL N+LL + + DFG+A+ + + +
Sbjct: 169 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYV 225
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTYEFFNGEMTLKHWV 192
+ + +MAPE + DV+S+GI L E F+ G P + G
Sbjct: 226 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP----YPG-------- 273
Query: 193 NDWLPISTMEVVDANL--LSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIV 248
+P VD+ + +E ++ E + ++++ C P +R K+IV
Sbjct: 274 ---MP------VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 322
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 20/170 (11%)
Query: 11 QCGRAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKA--LVLEYMPHGSLEKYLY 64
RA++ E +MK + H+N+I +++ S EEF+ +V+E M +L + +
Sbjct: 66 HAKRAYR----ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQ 120
Query: 65 SSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 124
LD + ++ + +++LH SA +IH DLKP N+++ + + DFG+A+
Sbjct: 121 ME---LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Query: 125 LLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTG 174
S T + T Y APE N D++S G ++ E G
Sbjct: 175 T---AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 70/159 (44%), Gaps = 20/159 (12%)
Query: 27 KSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL-----YSSNCILDIFQRLNIMID 81
+S+RH N+++ A+++EY G L + + +S + FQ+L
Sbjct: 71 RSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQL----- 125
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS--DFGIAKLLIGEDQSMTQTQTL 139
S + Y H S + H DLK +N LLD + L DFG +K + Q + T+
Sbjct: 126 -LSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS---TV 178
Query: 140 ATIGYMAPE-YGREGRVSTNGDVYSFGIMLMETFTGKKP 177
T Y+APE R+ DV+S G+ L G P
Sbjct: 179 GTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYP 217
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 17/187 (9%)
Query: 1 MEVAVKVFNLQCGRAFK------SFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYM 54
+E A K + RA + + E +++ + H N+I + N L+LE +
Sbjct: 38 LEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELV 97
Query: 55 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNV-LLDDNL 113
G L +L + + + + + + + YLH + + H DLKP+N+ LLD N+
Sbjct: 98 SGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNI 153
Query: 114 V---AYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLME 170
L DFG+A + + + T ++APE + D++S G++
Sbjct: 154 PIPHIKLIDFGLAHEI---EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI 210
Query: 171 TFTGKKP 177
+G P
Sbjct: 211 LLSGASP 217
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 76/172 (44%), Gaps = 16/172 (9%)
Query: 20 DVECEMMKSI------RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 73
DVEC M++ + L ++ S + V+EY+ G L ++ + F
Sbjct: 63 DVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ----VGRF 118
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSM 133
+ + + A L F S +I+ DLK DNV+LD ++DFG+ K I + +
Sbjct: 119 KEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD--GV 176
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGE 185
T T Y+APE + D ++FG++L E G+ P F GE
Sbjct: 177 TTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP----FEGE 224
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 97/238 (40%), Gaps = 44/238 (18%)
Query: 31 HRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLY----------SSNCILDIFQRL---- 76
H N++ ++ +C+ ++ EY +G L +L +S I++ +
Sbjct: 102 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 161
Query: 77 ---NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSM 133
+ VA + +L S IH DL N+LL + + DFG+A+ + + +
Sbjct: 162 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 218
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTYEFFNGEMTLKHWV 192
+ + +MAPE + DV+S+GI L E F+ G P + G
Sbjct: 219 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP----YPG-------- 266
Query: 193 NDWLPISTMEVVDANL--LSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIV 248
+P VD+ + +E ++ E + ++++ C P +R K+IV
Sbjct: 267 ---MP------VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 315
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 12/111 (10%)
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNL----VAYLSDFGIAKLLIGEDQSM 133
++ + +EYLH + V+H DLKP N+L D + DFG AK L E+ +
Sbjct: 121 VLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLL 177
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNG 184
T ++APE D++S G++L TG P F NG
Sbjct: 178 XTP--CYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP---FANG 223
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 87/193 (45%), Gaps = 38/193 (19%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 48 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 158
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-------DVY 162
+++ + D+G+A+ D MT GY+A + R + N D++
Sbjct: 159 NEDCELKILDYGLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 163 SFGIMLMETFTGK 175
S G ++ E TG+
Sbjct: 208 SVGCIMAELLTGR 220
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 19/168 (11%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E +++K + H N+ K+ ++ + LV E G L + S ++ I+
Sbjct: 76 EVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQ 134
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLL-----DDNLVAYLSDFGIAKLLIGEDQSMTQT 136
V S + Y H ++H DLKP+N+LL D N+ + DFG++ + S
Sbjct: 135 VLSGITYXH---KNKIVHRDLKPENLLLESKSKDANI--RIIDFGLSTHF---EASKKXK 186
Query: 137 QTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNG 184
+ T Y+APE G DV+S G++L +G P FNG
Sbjct: 187 DKIGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSGCPP----FNG 229
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 97/238 (40%), Gaps = 44/238 (18%)
Query: 31 HRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLY----------SSNCILDIFQRL---- 76
H N++ ++ +C+ ++ EY +G L +L +S I++ +
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 77 ---NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSM 133
+ VA + +L S IH DL N+LL + + DFG+A+ + + +
Sbjct: 169 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 225
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTYEFFNGEMTLKHWV 192
+ + +MAPE + DV+S+GI L E F+ G P + G
Sbjct: 226 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP----YPG-------- 273
Query: 193 NDWLPISTMEVVDANL--LSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIV 248
+P VD+ + +E ++ E + ++++ C P +R K+IV
Sbjct: 274 ---MP------VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 322
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 97/238 (40%), Gaps = 44/238 (18%)
Query: 31 HRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLY----------SSNCILDIFQRL---- 76
H N++ ++ +C+ ++ EY +G L +L +S I++ +
Sbjct: 104 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 163
Query: 77 ---NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSM 133
+ VA + +L S IH DL N+LL + + DFG+A+ + + +
Sbjct: 164 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 220
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTYEFFNGEMTLKHWV 192
+ + +MAPE + DV+S+GI L E F+ G P + G
Sbjct: 221 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP----YPG-------- 268
Query: 193 NDWLPISTMEVVDANL--LSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIV 248
+P VD+ + +E ++ E + ++++ C P +R K+IV
Sbjct: 269 ---MP------VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 317
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 97/238 (40%), Gaps = 44/238 (18%)
Query: 31 HRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLY----------SSNCILDIFQRL---- 76
H N++ ++ +C+ ++ EY +G L +L +S I++ +
Sbjct: 86 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 145
Query: 77 ---NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSM 133
+ VA + +L S IH DL N+LL + + DFG+A+ + + +
Sbjct: 146 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 202
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTYEFFNGEMTLKHWV 192
+ + +MAPE + DV+S+GI L E F+ G P + G
Sbjct: 203 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP----YPG-------- 250
Query: 193 NDWLPISTMEVVDANL--LSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIV 248
+P VD+ + +E ++ E + ++++ C P +R K+IV
Sbjct: 251 ---MP------VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 299
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 18/182 (9%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
EV +KV + +SF MM + H++L+ C + LV E++ GSL+
Sbjct: 42 EVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDT 101
Query: 62 YLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL---DDNLVA--- 115
YL + ++I +L + +A+A +HF +IH ++ N+LL +D
Sbjct: 102 YLKKNKNCINILWKLEVAKQLAAA---MHFLEENTLIHGNVCAKNILLIREEDRKTGNPP 158
Query: 116 --YLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGR-VSTNGDVYSFGIMLMETF 172
LSD GI+ ++ +D + Q + I ++ PE + ++ D +SFG L E
Sbjct: 159 FIKLSDPGISITVLPKD--ILQER----IPWVPPECIENPKNLNLATDKWSFGTTLWEIC 212
Query: 173 TG 174
+G
Sbjct: 213 SG 214
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 78/180 (43%), Gaps = 32/180 (17%)
Query: 31 HRNLIKVIS--SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 88
H N++ +++ N+ LV +YM L + ++ IL+ + ++ + ++Y
Sbjct: 68 HENIVNLLNVLRADNDRDVYLVFDYM-ETDLHAVIRAN--ILEPVHKQYVVYQLIKVIKY 124
Query: 89 LHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIG-------------------E 129
LH G ++H D+KP N+LL+ ++DFG+++ + +
Sbjct: 125 LHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFD 181
Query: 130 DQSMTQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTGKKPTYEFFNGEMTL 188
D T +AT Y APE T G D++S G +L E GK F G T+
Sbjct: 182 DDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK----PIFPGSSTM 237
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 85/187 (45%), Gaps = 24/187 (12%)
Query: 11 QCGRAFKSFDVECEMMKSIRHRNLIKVISSCSN----EEFK--ALVLEYMPHGSLEKYLY 64
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 66 HAKRAYR----ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQ 120
Query: 65 SSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 124
LD + ++ + +++LH SA +IH DLKP N+++ + + DFG+A+
Sbjct: 121 ME---LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Query: 125 LLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNG 184
S T + T Y APE N D++S G ++ E K F G
Sbjct: 175 ---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPG 227
Query: 185 EMTLKHW 191
+ W
Sbjct: 228 RDYIDQW 234
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 20/173 (11%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKA----LVLEYMPHGSLE---KYLYSSNCILDIFQ 74
E +M + H N++++++ C E L+L + G+L + L L Q
Sbjct: 76 EADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQ 135
Query: 75 RLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKL----LIGED 130
L +++ + LE +H A H DLKP N+LL D L D G + G
Sbjct: 136 ILWLLLGICRGLEAIHAKGYA---HRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSR 192
Query: 131 QSMTQTQTLA---TIGYMAPE-YGREGR--VSTNGDVYSFGIMLMETFTGKKP 177
Q++T A TI Y APE + + + DV+S G +L G+ P
Sbjct: 193 QALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGP 245
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 81/192 (42%), Gaps = 40/192 (20%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKY--------LYS 65
RA++ E +MK + H+N+I +++ + P SLE++ L
Sbjct: 69 RAYR----ELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMD 112
Query: 66 SNCILDIFQRLN------IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
+N I L+ ++ + +++LH SA +IH DLKP N+++ + + D
Sbjct: 113 ANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILD 169
Query: 120 FGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
FG+A+ S T + T Y APE N D++S G ++ E G
Sbjct: 170 FGLART---AGTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGV--- 223
Query: 180 EFFNGEMTLKHW 191
F G + W
Sbjct: 224 -LFPGTDHIDQW 234
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 16/172 (9%)
Query: 20 DVECEMMKS-----IRHRNLIKVISSC-SNEEFKALVLEYMPHGSLEKYLYSSNCILDIF 73
DVEC M++ + + + SC + V+EY+ G L ++ +
Sbjct: 62 DVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEP- 120
Query: 74 QRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSM 133
Q + +++ L +LH +I+ DLK DNV+LD ++DFG+ K + + +
Sbjct: 121 QAVFYAAEISIGLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMD--GV 175
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGE 185
T + T Y+APE + D +++G++L E G+ P F+GE
Sbjct: 176 TTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPP----FDGE 223
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 81/171 (47%), Gaps = 19/171 (11%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFK----ALVLEYMPHGSLEKYLYSSNCILDIFQRLN 77
E +++K +H N+I + + + F+ +++ + L + + + D Q
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYF- 117
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLL---IGEDQSMT 134
+ A++ LH + VIH DLKP N+L++ N + DFG+A+++ ++ T
Sbjct: 118 -IYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPT 173
Query: 135 QTQT-----LATIGYMAPEYG-REGRVSTNGDVYSFGIMLMETFTGKKPTY 179
Q+ +AT Y APE + S DV+S G +L E F ++P +
Sbjct: 174 GQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIF 223
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 22/169 (13%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKA------LVLEYMPHGSLEKYLYSSN 67
RA++ E ++K +RH N+I ++ + +E LV+ +M L K +
Sbjct: 70 RAYR----ELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEK 124
Query: 68 CILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 127
D Q L + + L Y+H +A +IH DLKP N+ ++++ + DFG+A+
Sbjct: 125 LGEDRIQFL--VYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQAD 179
Query: 128 GEDQSMTQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTGK 175
E + T Y APE R + D++S G ++ E TGK
Sbjct: 180 SE-----MXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 24/184 (13%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSN----EEFK--ALVLEYMPHGSLEKYLYSSN 67
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 63 RAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME- 116
Query: 68 CILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 127
LD + ++ + +++LH SA +IH DLKP N+++ + + DFG+A+
Sbjct: 117 --LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--- 168
Query: 128 GEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMT 187
S T + T Y APE N D++S G ++ E K F G
Sbjct: 169 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDY 224
Query: 188 LKHW 191
+ W
Sbjct: 225 IDQW 228
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 81/192 (42%), Gaps = 40/192 (20%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKY--------LYS 65
RA++ E +MK + H+N+I +++ + P SLE++ L
Sbjct: 69 RAYR----ELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMD 112
Query: 66 SNCILDIFQRLN------IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
+N I L+ ++ + +++LH SA +IH DLKP N+++ + + D
Sbjct: 113 ANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILD 169
Query: 120 FGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
FG+A+ S T + T Y APE N D++S G ++ E G
Sbjct: 170 FGLART---AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGV--- 223
Query: 180 EFFNGEMTLKHW 191
F G + W
Sbjct: 224 -LFPGTDHIDQW 234
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 24/184 (13%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSN----EEFK--ALVLEYMPHGSLEKYLYSSN 67
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 62 RAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME- 115
Query: 68 CILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 127
LD + ++ + +++LH SA +IH DLKP N+++ + + DFG+A+
Sbjct: 116 --LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--- 167
Query: 128 GEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMT 187
S T + T Y APE N D++S G ++ E K F G
Sbjct: 168 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDY 223
Query: 188 LKHW 191
+ W
Sbjct: 224 IDQW 227
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 83/167 (49%), Gaps = 20/167 (11%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSN----EEFK--ALVLEYMPHGSLEKYLYSSN 67
RA++ E ++K + H+N+I +++ + EEF+ LV+E M +L + ++
Sbjct: 69 RAYR----ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHME- 122
Query: 68 CILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 127
LD + ++ + +++LH SA +IH DLKP N+++ + + DFG+A+
Sbjct: 123 --LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAC 177
Query: 128 GEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTG 174
+ T + T Y APE + N D++S G ++ E G
Sbjct: 178 ---TNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 24/184 (13%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVIS----SCSNEEFKA--LVLEYMPHGSLEKYLYSSN 67
RA++ E +MK + H+N+I +++ S EEF+ +V+E M +L + +
Sbjct: 70 RAYR----ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME- 123
Query: 68 CILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 127
LD + ++ + +++LH SA +IH DLKP N+++ + + DFG+A+
Sbjct: 124 --LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART-- 176
Query: 128 GEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMT 187
S T + T Y APE N D++S G ++ E G F G
Sbjct: 177 -AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGV----LFPGTDH 231
Query: 188 LKHW 191
+ W
Sbjct: 232 IDQW 235
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 24/184 (13%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLYSSN 67
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 63 RAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME- 116
Query: 68 CILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 127
LD + ++ + +++LH SA +IH DLKP N+++ + + DFG+A+
Sbjct: 117 --LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--- 168
Query: 128 GEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMT 187
S T + T Y APE N D++S G ++ E K F G
Sbjct: 169 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDY 224
Query: 188 LKHW 191
+ W
Sbjct: 225 IDQW 228
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 86/184 (46%), Gaps = 24/184 (13%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSN----EEFK--ALVLEYMPHGSLEKYLYSSN 67
RA++ E ++K + H+N+I +++ + EEF+ LV+E M +L + ++
Sbjct: 67 RAYR----ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHME- 120
Query: 68 CILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 127
LD + ++ + +++LH SA +IH DLKP N+++ + + DFG+A+
Sbjct: 121 --LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--- 172
Query: 128 GEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMT 187
+ T + T Y APE N D++S G ++ E G F G
Sbjct: 173 TASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSV----IFQGTDH 228
Query: 188 LKHW 191
+ W
Sbjct: 229 IDQW 232
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 16/160 (10%)
Query: 22 ECEMMKSIRHRNLIKVI----SSCSNEEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRL 76
E ++K ++H N+I ++ + S EEF + L ++ L + D Q L
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 150
Query: 77 NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQT 136
+ + L+Y+H SA +IH DLKP N+ ++++ + DFG+A+ D M
Sbjct: 151 --IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--X 200
Query: 137 QTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTGK 175
+AT Y APE + D++S G ++ E TG+
Sbjct: 201 GXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 38/193 (19%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVIS----SCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 71 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 126
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 127 LVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 181
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-------DVY 162
+++ + DFG+A+ D M GY+A + R + N D++
Sbjct: 182 NEDCELKILDFGLAR---HTDDEMX--------GYVATRWYRAPEIMLNWMHYNQTVDIW 230
Query: 163 SFGIMLMETFTGK 175
S G ++ E TG+
Sbjct: 231 SVGCIMAELLTGR 243
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 24/184 (13%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLYSSN 67
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 69 RAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME- 122
Query: 68 CILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 127
LD + ++ + +++LH SA +IH DLKP N+++ + + DFG+A+
Sbjct: 123 --LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--- 174
Query: 128 GEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMT 187
S T + T Y APE N D++S G ++ E K F G
Sbjct: 175 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDY 230
Query: 188 LKHW 191
+ W
Sbjct: 231 IDQW 234
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 24/184 (13%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLYSSN 67
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 68 RAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME- 121
Query: 68 CILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 127
LD + ++ + +++LH SA +IH DLKP N+++ + + DFG+A+
Sbjct: 122 --LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--- 173
Query: 128 GEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMT 187
S T + T Y APE N D++S G ++ E K F G
Sbjct: 174 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDY 229
Query: 188 LKHW 191
+ W
Sbjct: 230 IDQW 233
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 24/184 (13%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLYSSN 67
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 69 RAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME- 122
Query: 68 CILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 127
LD + ++ + +++LH SA +IH DLKP N+++ + + DFG+A+
Sbjct: 123 --LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--- 174
Query: 128 GEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMT 187
S T + T Y APE N D++S G ++ E K F G
Sbjct: 175 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDY 230
Query: 188 LKHW 191
+ W
Sbjct: 231 IDQW 234
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 24/184 (13%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLYSSN 67
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 70 RAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME- 123
Query: 68 CILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 127
LD + ++ + +++LH SA +IH DLKP N+++ + + DFG+A+
Sbjct: 124 --LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--- 175
Query: 128 GEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMT 187
S T + T Y APE N D++S G ++ E K F G
Sbjct: 176 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDY 231
Query: 188 LKHW 191
+ W
Sbjct: 232 IDQW 235
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 16/160 (10%)
Query: 22 ECEMMKSIRHRNLIKVI----SSCSNEEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRL 76
E ++K ++H N+I ++ + S EEF + L ++ L + D Q L
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 126
Query: 77 NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQT 136
+ + L+Y+H SA +IH DLKP N+ ++++ + DFG+A+ D M
Sbjct: 127 --IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--A 176
Query: 137 QTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTGK 175
+AT Y APE + D++S G ++ E TG+
Sbjct: 177 GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 81/192 (42%), Gaps = 40/192 (20%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKY--------LYS 65
RA++ E +MK + H+N+I +++ + P SLE++ L
Sbjct: 69 RAYR----ELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMD 112
Query: 66 SNCILDIFQRLN------IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
+N I L+ ++ + +++LH SA +IH DLKP N+++ + + D
Sbjct: 113 ANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILD 169
Query: 120 FGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
FG+A+ S T + T Y APE N D++S G ++ E G
Sbjct: 170 FGLART---AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGV--- 223
Query: 180 EFFNGEMTLKHW 191
F G + W
Sbjct: 224 -LFPGTDHIDQW 234
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 24/184 (13%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLYSSN 67
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 70 RAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME- 123
Query: 68 CILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 127
LD + ++ + +++LH SA +IH DLKP N+++ + + DFG+A+
Sbjct: 124 --LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--- 175
Query: 128 GEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMT 187
S T + T Y APE N D++S G ++ E K F G
Sbjct: 176 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDY 231
Query: 188 LKHW 191
+ W
Sbjct: 232 IDQW 235
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 16/160 (10%)
Query: 22 ECEMMKSIRHRNLIKVI----SSCSNEEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRL 76
E ++K ++H N+I ++ + S EEF + L ++ L + D Q L
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 77 NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQT 136
+ + L+Y+H SA +IH DLKP N+ ++++ + DFG+A+ D M
Sbjct: 131 --IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--A 180
Query: 137 QTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTGK 175
+AT Y APE + D++S G ++ E TG+
Sbjct: 181 GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 24/184 (13%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSN----EEFKA--LVLEYMPHGSLEKYLYSSN 67
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 107 RAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME- 160
Query: 68 CILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 127
LD + ++ + +++LH SA +IH DLKP N+++ + + DFG+A+
Sbjct: 161 --LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART-- 213
Query: 128 GEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMT 187
S T + T Y APE N D++S G ++ E K F G
Sbjct: 214 -AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDY 268
Query: 188 LKHW 191
+ W
Sbjct: 269 IDQW 272
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 16/160 (10%)
Query: 22 ECEMMKSIRHRNLIKVI----SSCSNEEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRL 76
E ++K ++H N+I ++ + S EEF + L ++ L + D Q L
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 77 NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQT 136
+ + L+Y+H SA +IH DLKP N+ ++++ + DFG+A+ D M
Sbjct: 131 --IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--A 180
Query: 137 QTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTGK 175
+AT Y APE + D++S G ++ E TG+
Sbjct: 181 GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 24/184 (13%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSN----EEFK--ALVLEYMPHGSLEKYLYSSN 67
RA++ E +MK + H+N+I +++ + EEF+ LV+E M +L + +
Sbjct: 107 RAYR----ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME- 160
Query: 68 CILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 127
LD + ++ + +++LH SA +IH DLKP N+++ + + DFG+A+
Sbjct: 161 --LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART-- 213
Query: 128 GEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGEMT 187
S T + T Y APE N D++S G ++ E K F G
Sbjct: 214 -AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDY 268
Query: 188 LKHW 191
+ W
Sbjct: 269 IDQW 272
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 11/169 (6%)
Query: 13 GRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDI 72
G + + + E ++K I+H N+I + N+ L+ E + G L +L + +
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEE 114
Query: 73 FQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVA----YLSDFGIAKLLIG 128
+ + + + + YLH S + H DLKP+N++L D V + DFG+A +
Sbjct: 115 -EATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-- 168
Query: 129 EDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
D T ++APE + D++S G++ +G P
Sbjct: 169 -DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 6/157 (3%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
E + KS+ + +++ +++F +VLE SL + + + R M
Sbjct: 75 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMR 133
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLA 140
++YLH + VIH DLK N+ L+D++ + DFG+A + E +
Sbjct: 134 QTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKDLCG 188
Query: 141 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
T Y+APE + S D++S G +L GK P
Sbjct: 189 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 225
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 38/193 (19%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 48 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 158
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-------DVY 162
+++ + FG+A+ D MT GY+A + R + N D++
Sbjct: 159 NEDCELKILGFGLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 163 SFGIMLMETFTGK 175
S G ++ E TG+
Sbjct: 208 SVGCIMAELLTGR 220
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 69/166 (41%), Gaps = 12/166 (7%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E + M +RH L+ + + ++ ++ E+M G L + + + + + + M
Sbjct: 204 EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQ 263
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS--DFGIAKLLIGEDQSMTQTQTL 139
V L ++H +H DLKP+N++ L DFG+ L D + T
Sbjct: 264 VCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHL---DPKQSVKVTT 317
Query: 140 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGE 185
T + APE V D++S G++ +G P F GE
Sbjct: 318 GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP----FGGE 359
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 69/166 (41%), Gaps = 12/166 (7%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMID 81
E + M +RH L+ + + ++ ++ E+M G L + + + + + + M
Sbjct: 98 EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQ 157
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS--DFGIAKLLIGEDQSMTQTQTL 139
V L ++H +H DLKP+N++ L DFG+ L D + T
Sbjct: 158 VCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHL---DPKQSVKVTT 211
Query: 140 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTYEFFNGE 185
T + APE V D++S G++ +G P F GE
Sbjct: 212 GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP----FGGE 253
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 18/182 (9%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEK 61
EV +KV + +SF MM + H++L+ C + LV E++ GSL+
Sbjct: 42 EVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDT 101
Query: 62 YLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL---DDNLVA--- 115
YL + ++I +L + +A A +HF +IH ++ N+LL +D
Sbjct: 102 YLKKNKNCINILWKLEVAKQLAWA---MHFLEENTLIHGNVCAKNILLIREEDRKTGNPP 158
Query: 116 --YLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGR-VSTNGDVYSFGIMLMETF 172
LSD GI+ ++ +D + Q + I ++ PE + ++ D +SFG L E
Sbjct: 159 FIKLSDPGISITVLPKD--ILQER----IPWVPPECIENPKNLNLATDKWSFGTTLWEIC 212
Query: 173 TG 174
+G
Sbjct: 213 SG 214
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 38/193 (19%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 48 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 158
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-------DVY 162
+++ + D G+A+ D MT GY+A + R + N D++
Sbjct: 159 NEDCELKILDAGLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 163 SFGIMLMETFTGK 175
S G ++ E TG+
Sbjct: 208 SVGCIMAELLTGR 220
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 6/157 (3%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
E + KS+ + +++ +++F +VLE SL + + + R M
Sbjct: 91 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMR 149
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLA 140
++YLH + VIH DLK N+ L+D++ + DFG+A + E +
Sbjct: 150 QTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKDLCG 204
Query: 141 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
T Y+APE + S D++S G +L GK P
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 6/157 (3%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
+E + +S+ H++++ + +F +VLE SL + + + R +
Sbjct: 66 MEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR- 124
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLA 140
+ +YLH VIH DLK N+ L+++L + DFG+A + E +
Sbjct: 125 QIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKTLCG 179
Query: 141 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
T Y+APE + S DV+S G ++ GK P
Sbjct: 180 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 38/193 (19%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 48 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 158
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-------DVY 162
+++ + D G+A+ D MT GY+A + R + N D++
Sbjct: 159 NEDCELKILDRGLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 163 SFGIMLMETFTGK 175
S G ++ E TG+
Sbjct: 208 SVGCIMAELLTGR 220
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 6/157 (3%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
+E + +S+ H++++ + +F +VLE SL + + + R +
Sbjct: 66 MEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR- 124
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLA 140
+ +YLH VIH DLK N+ L+++L + DFG+A + E +
Sbjct: 125 QIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKTLCG 179
Query: 141 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
T Y+APE + S DV+S G ++ GK P
Sbjct: 180 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 7/113 (6%)
Query: 58 SLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYL 117
SL+++ + L Q + D AL +LH S ++H D+KP N+ L L
Sbjct: 142 SLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKL 198
Query: 118 SDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLME 170
DFG+ L Q YMAPE +G T DV+S G+ ++E
Sbjct: 199 GDFGLLVELGTAGAGEVQE---GDPRYMAPEL-LQGSYGTAADVFSLGLTILE 247
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 6/157 (3%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
+E + +S+ H++++ + +F +VLE SL + + + R +
Sbjct: 64 MEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR- 122
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLA 140
+ +YLH VIH DLK N+ L+++L + DFG+A + E +
Sbjct: 123 QIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKVLCG 177
Query: 141 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
T Y+APE + S DV+S G ++ GK P
Sbjct: 178 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 214
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 6/157 (3%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
E + KS+ + +++ +++F +VLE SL + + + R M
Sbjct: 91 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMR 149
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLA 140
++YLH + VIH DLK N+ L+D++ + DFG+A + E +
Sbjct: 150 QTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKTLCG 204
Query: 141 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
T Y+APE + S D++S G +L GK P
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 6/157 (3%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
E + KS+ + +++ +++F +VLE SL + + + R M
Sbjct: 91 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMR 149
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLA 140
++YLH + VIH DLK N+ L+D++ + DFG+A + E +
Sbjct: 150 QTIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKXLCG 204
Query: 141 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
T Y+APE + S D++S G +L GK P
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 6/157 (3%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
+E + +S+ H++++ + +F +VLE SL + + + R +
Sbjct: 70 MEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR- 128
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLA 140
+ +YLH VIH DLK N+ L+++L + DFG+A + E +
Sbjct: 129 QIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKTLCG 183
Query: 141 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
T Y+APE + S DV+S G ++ GK P
Sbjct: 184 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 220
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 29/193 (15%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKV--------------ISSCSNEEFKA 48
VA+K L ++ K E ++++ + H N++KV + S +
Sbjct: 39 VAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVY 98
Query: 49 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVL 108
+V EYM L L +L+ RL M + L+Y+H SA V+H DLKP N+
Sbjct: 99 IVQEYM-ETDLANVL-EQGPLLEEHARL-FMYQLLRGLKYIH---SANVLHRDLKPANLF 152
Query: 109 LD-DNLVAYLSDFGIAKLLIGEDQSMTQ----TQTLATIGYMAPEYGREGRVSTNG-DVY 162
++ ++LV + DFG+A+++ D + ++ L T Y +P T D++
Sbjct: 153 INTEDLVLKIGDFGLARIM---DPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMW 209
Query: 163 SFGIMLMETFTGK 175
+ G + E TGK
Sbjct: 210 AAGCIFAEMLTGK 222
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 90/215 (41%), Gaps = 29/215 (13%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL--- 59
V V F G + + E + ++H ++++++ + S++ +V E+M L
Sbjct: 57 VDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFE 116
Query: 60 ------EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL---D 110
++YS + M + AL Y H +IH D+KP VLL +
Sbjct: 117 IVKRADAGFVYSEAVA------SHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKE 167
Query: 111 DNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLME 170
++ L FG+A + +GE + + T +MAPE + DV+ G++L
Sbjct: 168 NSAPVKLGGFGVA-IQLGE-SGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFI 225
Query: 171 TFTGKKPTY----EFFNGEMTLKHWVN--DWLPIS 199
+G P Y F G + K+ +N W IS
Sbjct: 226 LLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHIS 260
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 28/166 (16%)
Query: 22 ECEMMKSIRHRNLIKVI----SSCSNEEFKALVL-EYMPHGSLEKYLYSSNCILDIFQRL 76
E ++K ++H N+I ++ + S EEF + L ++ L + D Q L
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 130
Query: 77 NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQT 136
+ + L+Y+H SA +IH DLKP N+ ++++ + DF +A+ D MT
Sbjct: 131 --IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLAR---HTDDEMT-- 180
Query: 137 QTLATIGYMAPEYGREGRVSTNG-------DVYSFGIMLMETFTGK 175
GY+A + R + N D++S G ++ E TG+
Sbjct: 181 ------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 38/193 (19%)
Query: 1 MEVAVKVFNLQCGRAFKSF------DVECEMMKSIRHRNLIKVI----SSCSNEEFKALV 50
+ VAVK + R F+S E ++K ++H N+I ++ + S EEF +
Sbjct: 48 LRVAVK----KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 103
Query: 51 L-EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
L ++ L + D Q L + + L+Y+H SA +IH DLKP N+ +
Sbjct: 104 LVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SADIIHRDLKPSNLAV 158
Query: 110 DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNG-------DVY 162
+++ + D G+A+ D MT GY+A + R + N D++
Sbjct: 159 NEDCELKILDGGLAR---HTDDEMT--------GYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 163 SFGIMLMETFTGK 175
S G ++ E TG+
Sbjct: 208 SVGCIMAELLTGR 220
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 90/215 (41%), Gaps = 29/215 (13%)
Query: 3 VAVKVFNLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL--- 59
V V F G + + E + ++H ++++++ + S++ +V E+M L
Sbjct: 59 VDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFE 118
Query: 60 ------EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL---D 110
++YS + M + AL Y H +IH D+KP VLL +
Sbjct: 119 IVKRADAGFVYSEAVA------SHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKE 169
Query: 111 DNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLME 170
++ L FG+A + +GE + + T +MAPE + DV+ G++L
Sbjct: 170 NSAPVKLGGFGVA-IQLGE-SGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFI 227
Query: 171 TFTGKKPTY----EFFNGEMTLKHWVN--DWLPIS 199
+G P Y F G + K+ +N W IS
Sbjct: 228 LLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHIS 262
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 81/192 (42%), Gaps = 40/192 (20%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKY--------LYS 65
RA++ E +MK + H+N+I +++ + P SLE++ L
Sbjct: 63 RAYR----ELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMD 106
Query: 66 SNCILDIFQRLN------IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
+N I L+ ++ + +++LH SA +IH DLKP N+++ + + D
Sbjct: 107 ANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILD 163
Query: 120 FGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
FG+A+ S T + T Y APE N D++S G ++ E K
Sbjct: 164 FGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKI--- 217
Query: 180 EFFNGEMTLKHW 191
F G + W
Sbjct: 218 -LFPGRDYIDQW 228
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 23/176 (13%)
Query: 22 ECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRL--NIM 79
E ++K ++HRN+I++ S + L+ EY L+KY+ + D+ R+ + +
Sbjct: 83 EVSLLKELQHRNIIELKSVIHHNHRLHLIFEYA-ENDLKKYMDKNP---DVSMRVIKSFL 138
Query: 80 IDVASALEYLHFGCSAPVIHCDLKPDNVLL-----DDNLVAYLSDFGIAKLLIGEDQSMT 134
+ + + + H S +H DLKP N+LL + V + DFG+A+ +
Sbjct: 139 YQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQF- 194
Query: 135 QTQTLATIGYMAPEYGREGR-VSTNGDVYS----FGIMLMET--FTGKKPTYEFFN 183
T + T+ Y PE R ST+ D++S + MLM+T F G + F
Sbjct: 195 -THEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFK 249
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 81/192 (42%), Gaps = 40/192 (20%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKY--------LYS 65
RA++ E +MK + H+N+I +++ + P SLE++ L
Sbjct: 74 RAYR----ELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMD 117
Query: 66 SNCILDIFQRLN------IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
+N I L+ ++ + +++LH SA +IH DLKP N+++ + + D
Sbjct: 118 ANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILD 174
Query: 120 FGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
FG+A+ S T + T Y APE N D++S G ++ E K
Sbjct: 175 FGLART---AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKI--- 228
Query: 180 EFFNGEMTLKHW 191
F G + W
Sbjct: 229 -LFPGRDYIDQW 239
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 26/162 (16%)
Query: 27 KSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL-----YSSNCILDIFQRLNIMID 81
+S+RH N+++ A+V+EY G L + + +S + FQ+L
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL----- 124
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS--DFGIAKLLIGEDQSMTQTQTL 139
S + Y H + V H DLK +N LLD + L FG +K + Q + T+
Sbjct: 125 -ISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKS---TV 177
Query: 140 ATIGYMAPEY----GREGRVSTNGDVYSFGIMLMETFTGKKP 177
T Y+APE +G+V+ DV+S G+ L G P
Sbjct: 178 GTPAYIAPEVLLKKEYDGKVA---DVWSCGVTLYVMLVGAYP 216
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 84/226 (37%), Gaps = 57/226 (25%)
Query: 4 AVKVFNLQCGRAFKSFDVE-----CEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 58
A+K+ N R DVE +MK + H N+ ++ +E++ LV+E G
Sbjct: 55 AIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGH 114
Query: 59 LEKYL------YSSNCILDIFQRL---------------------------------NIM 79
L L + C +D+ + NIM
Sbjct: 115 LLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIM 174
Query: 80 IDVASALEYLHFGCSAPVIHCDLKPDNVLLDDN--LVAYLSDFGIA----KLLIGEDQSM 133
+ SAL YLH + + H D+KP+N L N L DFG++ KL GE M
Sbjct: 175 RQIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGM 231
Query: 134 TQTQTLATIGYMAPEYGREGRVSTNG--DVYSFGIMLMETFTGKKP 177
T T ++APE S D +S G++L G P
Sbjct: 232 TTKA--GTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVP 275
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 6/157 (3%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
+E + +S+ H++++ + +F +VLE SL + + + R +
Sbjct: 88 MEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR- 146
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLA 140
+ +YLH VIH DLK N+ L+++L + DFG+A + E +
Sbjct: 147 QIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKVLCG 201
Query: 141 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
T Y+APE + S DV+S G ++ GK P
Sbjct: 202 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 238
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 80/192 (41%), Gaps = 40/192 (20%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKY--------LYS 65
RA++ E +MK + H+N+I +++ + P SLE++ L
Sbjct: 71 RAYR----ELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMD 114
Query: 66 SNCILDIFQRLN------IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
+N I L+ ++ + +++LH SA +IH DLKP N+++ + + D
Sbjct: 115 ANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILD 171
Query: 120 FGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
FG+A+ S + T Y APE N D++S G ++ E G
Sbjct: 172 FGLART---AGTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGV--- 225
Query: 180 EFFNGEMTLKHW 191
F G + W
Sbjct: 226 -LFPGTDHIDQW 236
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 20/135 (14%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS-LEKYLYSSNCILDIFQRLN-- 77
+E ++ + H N+IKV+ N+ F LV+E HGS L+ + + +D RL+
Sbjct: 78 LEIAILSRVEHANIIKVLDIFENQGFFQLVMEK--HGSGLDLFAF-----IDRHPRLDEP 130
Query: 78 ----IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSM 133
I + SA+ YL +IH D+K +N+++ ++ L DFG A L ++
Sbjct: 131 LASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL---ERGK 184
Query: 134 TQTQTLATIGYMAPE 148
TI Y APE
Sbjct: 185 LFYTFCGTIEYCAPE 199
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 6/157 (3%)
Query: 21 VECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMI 80
+E + +S+ H++++ + +F +VLE SL + + + R +
Sbjct: 90 MEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR- 148
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQTLA 140
+ +YLH VIH DLK N+ L+++L + DFG+A + E +
Sbjct: 149 QIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKVLCG 203
Query: 141 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 177
T Y+APE + S DV+S G ++ GK P
Sbjct: 204 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 240
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 12/103 (11%)
Query: 81 DVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQT-L 139
++ L +LH VIH D+K NVLL +N L DFG++ L D+++ + T +
Sbjct: 137 EILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL---DRTVGRRNTFI 190
Query: 140 ATIGYMAPEY-----GREGRVSTNGDVYSFGIMLMETFTGKKP 177
T +MAPE + D++S GI +E G P
Sbjct: 191 GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 9/105 (8%)
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDD---NLVAYLSDFGIAKLLIGEDQSMT 134
I + A++YLH S + H D+KP+N+L N + L+DFG AK + +
Sbjct: 166 IXKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---S 219
Query: 135 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
T T Y+APE + + D +S G++ G P Y
Sbjct: 220 LTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFY 264
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 26/162 (16%)
Query: 27 KSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYL-----YSSNCILDIFQRLNIMID 81
+S+RH N+++ A+V+EY G L + + +S + FQ+L
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL----- 124
Query: 82 VASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLS--DFGIAKLLIGEDQSMTQTQTL 139
S + Y H + V H DLK +N LLD + L FG +K + Q T+
Sbjct: 125 -ISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQP---KDTV 177
Query: 140 ATIGYMAPEY----GREGRVSTNGDVYSFGIMLMETFTGKKP 177
T Y+APE +G+V+ DV+S G+ L G P
Sbjct: 178 GTPAYIAPEVLLKKEYDGKVA---DVWSCGVTLYVMLVGAYP 216
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 35/183 (19%)
Query: 25 MMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNC------ILDIFQRLNI 78
+ +S H N+I+ S + + F + LE + + +L+ + S N + + +++
Sbjct: 62 LTESDDHPNVIRYYCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISL 120
Query: 79 MIDVASALEYLHFGCSAPVIHCDLKPDNVLLD-------------DNLVAYLSDFGIAKL 125
+ +AS + +LH S +IH DLKP N+L+ +NL +SDFG+ K
Sbjct: 121 LRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 177
Query: 126 LIGEDQSMTQT---QTLATIGYMAPEYGREG-------RVSTNGDVYSFGIMLMETFT-G 174
L QS +T T G+ APE E R++ + D++S G + + G
Sbjct: 178 L-DSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKG 236
Query: 175 KKP 177
K P
Sbjct: 237 KHP 239
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 80/192 (41%), Gaps = 40/192 (20%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKY--------LYS 65
RA++ E +MK + H+N+I +++ + P SLE++ L
Sbjct: 69 RAYR----ELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMD 112
Query: 66 SNCILDIFQRLN------IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
+N I L+ ++ + +++LH SA +IH DLKP N+++ + + D
Sbjct: 113 ANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILD 169
Query: 120 FGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
FG+A+ S + T Y APE N D++S G ++ E K
Sbjct: 170 FGLAR---TAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKI--- 223
Query: 180 EFFNGEMTLKHW 191
F G + W
Sbjct: 224 -LFPGRDYIDQW 234
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 84/186 (45%), Gaps = 29/186 (15%)
Query: 25 MMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNC------ILDIFQRLNI 78
+ +S H N+I+ S + + F + LE + + +L+ + S N + + +++
Sbjct: 80 LTESDDHPNVIRYYCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISL 138
Query: 79 MIDVASALEYLHFGCSAPVIHCDLKPDNVLLD-------------DNLVAYLSDFGIAKL 125
+ +AS + +LH S +IH DLKP N+L+ +NL +SDFG+ K
Sbjct: 139 LRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 195
Query: 126 LIGEDQSMTQ--TQTLATIGYMAPEYGREG---RVSTNGDVYSFGIMLMETFT-GKKPTY 179
L T G+ APE E R++ + D++S G + + GK P
Sbjct: 196 LDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 255
Query: 180 EFFNGE 185
+ ++ E
Sbjct: 256 DKYSRE 261
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 84/186 (45%), Gaps = 29/186 (15%)
Query: 25 MMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNC------ILDIFQRLNI 78
+ +S H N+I+ S + + F + LE + + +L+ + S N + + +++
Sbjct: 80 LTESDDHPNVIRYYCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISL 138
Query: 79 MIDVASALEYLHFGCSAPVIHCDLKPDNVLLD-------------DNLVAYLSDFGIAKL 125
+ +AS + +LH S +IH DLKP N+L+ +NL +SDFG+ K
Sbjct: 139 LRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 195
Query: 126 LIGEDQSMTQ--TQTLATIGYMAPEYGREG---RVSTNGDVYSFGIMLMETFT-GKKPTY 179
L T G+ APE E R++ + D++S G + + GK P
Sbjct: 196 LDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 255
Query: 180 EFFNGE 185
+ ++ E
Sbjct: 256 DKYSRE 261
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 76/163 (46%), Gaps = 20/163 (12%)
Query: 37 VISSCSNEEFKALVLEYMP---HGSLEKYLYSSNCILDIFQRLN-IMIDVASALEYLHFG 92
VI + S ++ +++EY+P H L+ ++ S I +N I I + + F
Sbjct: 103 VIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSI-----PMNLISIYIYQLFRAVGFI 157
Query: 93 CSAPVIHCDLKPDNVLLD--DNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYG 150
S + H D+KP N+L++ DN + L DFG AK LI + S+ + + Y APE
Sbjct: 158 HSLGICHRDIKPQNLLVNSKDNTLK-LCDFGSAKKLIPSEPSVA---XICSRFYRAPELM 213
Query: 151 REGRVSTNG-DVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWV 192
T D++S G + E GK F+GE ++ V
Sbjct: 214 LGATEYTPSIDLWSIGCVFGELILGK----PLFSGETSIDQLV 252
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 29/172 (16%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVI------SSCSNEEFKALVLEYMPHGSLEKYL---Y 64
RA++ E ++K ++H N+I ++ SS N LV+ +M L+K + +
Sbjct: 69 RAYR----ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFM-QTDLQKIMGLKF 123
Query: 65 SSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAK 124
S I ++ + L+Y+H SA V+H DLKP N+ ++++ + DFG+A+
Sbjct: 124 SEEKIQ------YLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR 174
Query: 125 LLIGEDQSMTQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTGK 175
E T + T Y APE + D++S G ++ E TGK
Sbjct: 175 HADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 23/169 (13%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVI------SSCSNEEFKALVLEYMPHGSLEKYLYSSN 67
RA++ E ++K ++H N+I ++ SS N LV+ +M L+K +
Sbjct: 87 RAYR----ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFM-QTDLQKIMGME- 140
Query: 68 CILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLI 127
F I V L+ L + SA V+H DLKP N+ ++++ + DFG+A+
Sbjct: 141 -----FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD 195
Query: 128 GEDQSMTQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTGK 175
E T + T Y APE + D++S G ++ E TGK
Sbjct: 196 AE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 77 NIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQT 136
I + + ALE+LH S VIH D+KP NVL++ DFGI+ L+ + + +
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDD---VAKD 194
Query: 137 QTLATIGYMA-----PEYGREGRVSTNGDVYSFGIMLME 170
Y A PE ++G S D++S GI +E
Sbjct: 195 IDAGCKPYXAPERINPELNQKG-YSVKSDIWSLGITXIE 232
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 80/192 (41%), Gaps = 40/192 (20%)
Query: 14 RAFKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKY--------LYS 65
RA++ E +MK + H+N+I +++ + P SLE++ L
Sbjct: 69 RAYR----ELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMD 112
Query: 66 SNCILDIFQRLN------IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSD 119
+N I L+ ++ + +++LH SA +IH DLKP N+++ + + D
Sbjct: 113 ANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILD 169
Query: 120 FGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
FG+A+ S + T Y APE N D++S G ++ E K
Sbjct: 170 FGLAR---TAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKI--- 223
Query: 180 EFFNGEMTLKHW 191
F G + W
Sbjct: 224 -LFPGRDYIDQW 234
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 33/182 (18%)
Query: 25 MMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNC------ILDIFQRLNI 78
+ +S H N+I+ S + + F + LE + + +L+ + S N + + +++
Sbjct: 62 LTESDDHPNVIRYYCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISL 120
Query: 79 MIDVASALEYLHFGCSAPVIHCDLKPDNVLLD-------------DNLVAYLSDFGIAKL 125
+ +AS + +LH S +IH DLKP N+L+ +NL +SDFG+ K
Sbjct: 121 LRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 177
Query: 126 LIGEDQSMTQ--TQTLATIGYMAPEYGREG-------RVSTNGDVYSFGIMLMETFT-GK 175
L T G+ APE E R++ + D++S G + + GK
Sbjct: 178 LDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGK 237
Query: 176 KP 177
P
Sbjct: 238 HP 239
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 11/168 (6%)
Query: 19 FDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNI 78
F E +++ + R + ++ + +E + LV+EY G L L +
Sbjct: 108 FREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFY 167
Query: 79 MIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQSMTQTQT 138
+ ++ A++ +H +H D+KPDN+LLD L+DFG + L + D ++
Sbjct: 168 LAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFG-SCLKLRADGTVRSLVA 223
Query: 139 LATIGYMAPE-------YGREGRVSTNGDVYSFGIMLMETFTGKKPTY 179
+ T Y++PE G D ++ G+ E F G+ P Y
Sbjct: 224 VGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFY 271
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 83/192 (43%), Gaps = 22/192 (11%)
Query: 2 EVAVKVFNLQCGRAFKSFDVECEMMKSIR-HRNLIKVISSCSNEEFKALVLEYMPHGSLE 60
E AVK+ Q G + E E + + ++N++++I ++ LV E + GS+
Sbjct: 40 EYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSIL 99
Query: 61 KYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDF 120
++ + + ++ DVA+AL++LH + + H DLKP+N+L + +S
Sbjct: 100 AHIQKQK-HFNEREASRVVRDVAAALDFLH---TKGIAHRDLKPENILCESP--EKVSPV 153
Query: 121 GIAKLLIGEDQSMTQTQTLATIG----------YMAPEY-----GREGRVSTNGDVYSFG 165
I +G + + T T YMAPE + D++S G
Sbjct: 154 KICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLG 213
Query: 166 IMLMETFTGKKP 177
++L +G P
Sbjct: 214 VVLYIMLSGYPP 225
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 83/190 (43%), Gaps = 21/190 (11%)
Query: 1 MEVAVKVF--NLQCGRAFKSFDVECEMMKSI--------RHRNLIKVISSCSNEEFKALV 50
++VA+KV N G + S V C + ++ H +I+++ +E LV
Sbjct: 57 LQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLV 116
Query: 51 LEY-MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL 109
LE +P L Y+ + + R V +A+++ H S V+H D+K +N+L+
Sbjct: 117 LERPLPAQDLFDYITEKGPLGEGPSRC-FFGQVVAAIQHCH---SRGVVHRDIKDENILI 172
Query: 110 D-DNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEY-GREGRVSTNGDVYSFGIM 167
D A L DFG LL D+ T T Y PE+ R + V+S GI+
Sbjct: 173 DLRRGCAKLIDFGSGALL--HDEPYTDFD--GTRVYSPPEWISRHQYHALPATVWSLGIL 228
Query: 168 LMETFTGKKP 177
L + G P
Sbjct: 229 LYDMVCGDIP 238
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 17/157 (10%)
Query: 33 NLIKVISSCSNEEFK--ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 90
N+IK+I + + K ALV EY+ + K LY IL F M ++ AL+Y H
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDF-KQLYQ---ILTDFDIRFYMYELLKALDYCH 149
Query: 91 FGCSAPVIHCDLKPDNVLLDDNLVAY-LSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEY 149
S ++H D+KP NV++D L D+G+A+ + +A+ + PE
Sbjct: 150 ---SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFY---HPAQEYNVRVASRYFKGPEL 203
Query: 150 GREGRVSTNG-DVYSFGIMLMETFTGKKPTYEFFNGE 185
+ ++ D++S G ML ++P FF+G+
Sbjct: 204 LVDYQMYDYSLDMWSLGCMLASMIFRREP---FFHGQ 237
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 17/157 (10%)
Query: 33 NLIKVISSCSNEEFK--ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLH 90
N+IK+I + + K ALV EY+ + K LY IL F M ++ AL+Y H
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTDF-KQLYQ---ILTDFDIRFYMYELLKALDYCH 154
Query: 91 FGCSAPVIHCDLKPDNVLLDDNLVAY-LSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEY 149
S ++H D+KP NV++D L D+G+A+ + +A+ + PE
Sbjct: 155 ---SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFY---HPAQEYNVRVASRYFKGPEL 208
Query: 150 GREGRVSTNG-DVYSFGIMLMETFTGKKPTYEFFNGE 185
+ ++ D++S G ML ++P FF+G+
Sbjct: 209 LVDYQMYDYSLDMWSLGCMLASMIFRREP---FFHGQ 242
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 39/146 (26%)
Query: 70 LDIFQRLNI------MIDVASALEYLH-FGCSAPVIHCDLKPDNVLLDDNLVAY-LSDFG 121
LDI L+ M+++ AL+ +H FG ++H D+KP N L + L Y L DFG
Sbjct: 108 LDILNSLSFQEVREYMLNLFKALKRIHQFG----IVHRDVKPSNFLYNRRLKKYALVDFG 163
Query: 122 IA-----------KLLIGEDQS-----------MTQTQTLA----TIGYMAPEYGREGRV 155
+A K + E Q +++ Q +A T G+ APE +
Sbjct: 164 LAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPN 223
Query: 156 STNG-DVYSFGIMLMETFTGKKPTYE 180
T D++S G++ + +G+ P Y+
Sbjct: 224 QTTAIDMWSAGVIFLSLLSGRYPFYK 249
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Query: 78 IMIDVASALEYLHFGCSAPVIHCDLKPDNVLLDD---NLVAYLSDFGIAKLLIGE 129
IM + A++YLH S + H D+KP+N+L N + L+DFG AK GE
Sbjct: 122 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGE 173
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 87/193 (45%), Gaps = 31/193 (16%)
Query: 2 EVAVKVFNLQCGRA-FKSFDVECEMMKSIRHRNLIKVISSCSNE-EFKALVLEYMPHGSL 59
EVA+K L+C + +E ++ K ++ I I C E ++ +V+E + SL
Sbjct: 36 EVAIK---LECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGP-SL 91
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL----DDNLVA 115
E + + L + + S +EY+H S IH D+KPDN L+ NLV
Sbjct: 92 EDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLV- 147
Query: 116 YLSDFGIAK----------LLIGEDQSMTQTQTLATIG-YMAPEYGREGRVSTNGDVYSF 164
Y+ DFG+AK + E++++T T A+I ++ E R D+ S
Sbjct: 148 YIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRR------DDLESL 201
Query: 165 GIMLMETFTGKKP 177
G +LM G P
Sbjct: 202 GYVLMYFNLGSLP 214
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 87/193 (45%), Gaps = 31/193 (16%)
Query: 2 EVAVKVFNLQCGRA-FKSFDVECEMMKSIRHRNLIKVISSCSNE-EFKALVLEYMPHGSL 59
EVA+K L+C + +E ++ K ++ I I C E ++ +V+E + SL
Sbjct: 34 EVAIK---LECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGP-SL 89
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL----DDNLVA 115
E + + L + + S +EY+H S IH D+KPDN L+ NLV
Sbjct: 90 EDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLV- 145
Query: 116 YLSDFGIAK----------LLIGEDQSMTQTQTLATIG-YMAPEYGREGRVSTNGDVYSF 164
Y+ DFG+AK + E++++T T A+I ++ E R D+ S
Sbjct: 146 YIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRR------DDLESL 199
Query: 165 GIMLMETFTGKKP 177
G +LM G P
Sbjct: 200 GYVLMYFNLGSLP 212
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 94/211 (44%), Gaps = 47/211 (22%)
Query: 49 LVLEYMPHGSLEKYLYSSNCILDIFQRL---NIMIDVASALEYLHFGCSAPVIHCDLKPD 105
L+LEY G + S C+ ++ + + +++ + LE +++ ++H DLKP
Sbjct: 106 LILEYAAGGEI-----FSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQ 160
Query: 106 NVLL-------DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTN 158
N+LL D +V DFG+++ + + + + T Y+APE ++T
Sbjct: 161 NILLSSIYPLGDIKIV----DFGMSRKI---GHACELREIMGTPEYLAPEILNYDPITTA 213
Query: 159 GDVYSFGIMLMETFTGKKPTYEFFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVA 218
D+++ GI+ T P F GE + ++N +SQ ++ +
Sbjct: 214 TDMWNIGIIAYMLLTHTSP----FVGEDNQETYLN---------------ISQVNVDY-- 252
Query: 219 KEQCVSFVFNLA----MACTVESPEQRINAK 245
E+ S V LA + V++PE+R A+
Sbjct: 253 SEETFSSVSQLATDFIQSLLVKNPEKRPTAE 283
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 49/120 (40%), Gaps = 33/120 (27%)
Query: 80 IDVASALEYLHFGCSAPVIHCDLKPDNVLLDD-----NLVAY------------------ 116
I++ AL YL + H DLKP+N+LLDD +L+
Sbjct: 144 IEILKALNYLR---KMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTG 200
Query: 117 --LSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTG 174
L DFG A +S + T Y APE + D++SFG +L E +TG
Sbjct: 201 IKLIDFGCATF-----KSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTG 255
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 89 LHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQS-MTQTQTLATIGYMAP 147
LH A V+H DL P N+LL DN + DF +A+ ED + +T + Y AP
Sbjct: 147 LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR----EDTADANKTHYVTHRWYRAP 202
Query: 148 EYGREGRVSTN-GDVYSFGIMLMETFTGK 175
E + + T D++S G ++ E F K
Sbjct: 203 ELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 86/193 (44%), Gaps = 31/193 (16%)
Query: 2 EVAVKVFNLQCGRA-FKSFDVECEMMKSIRHRNLIKVISSCSNE-EFKALVLEYMPHGSL 59
EVA+K L+C + +E + K ++ I I C E ++ +V+E + SL
Sbjct: 36 EVAIK---LECVKTKHPQLHIESKFYKMMQGGVGIPSIKWCGAEGDYNVMVMELLGP-SL 91
Query: 60 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVLL----DDNLVA 115
E + + L + + S +EY+H S IH D+KPDN L+ NLV
Sbjct: 92 EDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLV- 147
Query: 116 YLSDFGIAK----------LLIGEDQSMTQTQTLATIG-YMAPEYGREGRVSTNGDVYSF 164
Y+ DFG+AK + E++++T T A+I ++ E R D+ S
Sbjct: 148 YIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRR------DDLESL 201
Query: 165 GIMLMETFTGKKP 177
G +LM G P
Sbjct: 202 GYVLMYFNLGSLP 214
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 89 LHFGCSAPVIHCDLKPDNVLLDDNLVAYLSDFGIAKLLIGEDQS-MTQTQTLATIGYMAP 147
LH A V+H DL P N+LL DN + DF +A+ ED + +T + Y AP
Sbjct: 147 LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR----EDTADANKTHYVTHRWYRAP 202
Query: 148 EYGREGRVSTN-GDVYSFGIMLMETFTGK 175
E + + T D++S G ++ E F K
Sbjct: 203 ELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 30/128 (23%)
Query: 49 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGCSAPVIHCDLKPDNVL 108
+V+EY+ SL++ S L + + + ++++ AL YLH S +++ DLKP+N++
Sbjct: 161 IVMEYVGGQSLKR---SKGQKLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIM 214
Query: 109 L--------DDNLVAYLSDFGIAKLLIGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGD 160
L D V+ ++ FG L G T G+ APE R G D
Sbjct: 215 LTEEQLKLIDLGAVSRINSFG---YLYG------------TPGFQAPEIVRTGPTVAT-D 258
Query: 161 VYSFGIML 168
+Y+ G L
Sbjct: 259 IYTVGRTL 266
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.137 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,552,442
Number of Sequences: 62578
Number of extensions: 304057
Number of successful extensions: 2835
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 264
Number of HSP's that attempted gapping in prelim test: 843
Number of HSP's gapped (non-prelim): 1119
length of query: 273
length of database: 14,973,337
effective HSP length: 97
effective length of query: 176
effective length of database: 8,903,271
effective search space: 1566975696
effective search space used: 1566975696
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)