BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024030
(273 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P70187|HIAT1_MOUSE Hippocampus abundant transcript 1 protein OS=Mus musculus GN=Hiat1
PE=2 SV=3
Length = 490
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 112/268 (41%), Gaps = 47/268 (17%)
Query: 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIG 72
+F+ F WG T A T V + P ++G Q + GL + + P+IG
Sbjct: 44 IFLEFFAWGLLT-----APTLVVLHETFP-----KHTFLMNGLIQGVKGLLSFLSAPLIG 93
Query: 73 NLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY 132
LSD +GRK+ L L + + P+ ++ + S +++A ++ + A+ + AY
Sbjct: 94 ALSDVWGRKSFLLLTVFFTCAPIPLM--KISPWWYFAVISVSGVFAVTFS-----VVFAY 146
Query: 133 VADNISERQRASAFGILLGVLSASFVC----GTLAARFLSTTSAFQAATIVSMLAAAYMR 188
VAD E +R+ A+G++ +AS V G R + AT +++L ++
Sbjct: 147 VADITQEHERSMAYGLVSATFAASLVTSPAIGAYLGRVYGDSLVVVLATAIALLDICFIL 206
Query: 189 VFLKDDVPND-DDDDLTRPIITEETEGVNQNESNSPVKIPVCKKI--PSIRDLICLLRSS 245
V + + +P PI E+ + KK+ SI LIC
Sbjct: 207 VAVPESLPEKMRPASWGAPISWEQAD-----------PFASLKKVGQDSIVLLIC----- 250
Query: 246 VTLSQAAVVAFFSGLSEGGMQASFLVYI 273
+ F S L E G +SF +Y+
Sbjct: 251 -------ITVFLSYLPEAGQYSSFFLYL 271
>sp|Q96MC6|HIAT1_HUMAN Hippocampus abundant transcript 1 protein OS=Homo sapiens GN=HIAT1
PE=2 SV=2
Length = 490
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 112/268 (41%), Gaps = 47/268 (17%)
Query: 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIG 72
+F+ F WG T A T V + P ++G Q + GL + + P+IG
Sbjct: 44 IFLEFFAWGLLT-----APTLVVLHETFP-----KHTFLMNGLIQGVKGLLSFLSAPLIG 93
Query: 73 NLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY 132
LSD +GRK+ L L + + P+ ++ + S +++A ++ + A+ + AY
Sbjct: 94 ALSDVWGRKSFLLLTVFFTCAPIPLM--KISPWWYFAVISVSGVFAVTFS-----VVFAY 146
Query: 133 VADNISERQRASAFGILLGVLSASFVC----GTLAARFLSTTSAFQAATIVSMLAAAYMR 188
VAD E +R+ A+G++ +AS V G R + AT +++L ++
Sbjct: 147 VADITQEHERSMAYGLVSATFAASLVTSPAIGAYLGRVYGDSLVVVLATAIALLDICFIL 206
Query: 189 VFLKDDVPND-DDDDLTRPIITEETEGVNQNESNSPVKIPVCKKI--PSIRDLICLLRSS 245
V + + +P PI E+ + KK+ SI LIC
Sbjct: 207 VAVPESLPEKMRPASWGAPISWEQAD-----------PFASLKKVGQDSIVLLIC----- 250
Query: 246 VTLSQAAVVAFFSGLSEGGMQASFLVYI 273
+ F S L E G +SF +Y+
Sbjct: 251 -------ITVFLSYLPEAGQYSSFFLYL 271
>sp|Q8CIA9|HIAL1_MOUSE Hippocampus abundant transcript-like protein 1 OS=Mus musculus
GN=Hiatl1 PE=2 SV=3
Length = 507
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 25/223 (11%)
Query: 52 LSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYY 111
++G Q + GL + + P+IG LSD +GRK L + + P+ ++ + Y+
Sbjct: 83 MNGLIQGVKGLLSFLSAPLIGALSDVWGRKPFLLGTVFFTCFPIPLMRINP-----WWYF 137
Query: 112 ALRTLTAMVCEGSIN-CLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTT 170
+ +++ + S+ + AYVAD E +R++A+G + +AS V +LS
Sbjct: 138 GMISVSGVF---SVTFSVIFAYVADFTQEHERSTAYGWVSATFAASLVSSPAIGTYLSAN 194
Query: 171 SAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCK 230
+V+ L A F+ VP + + RP Q + + +K V K
Sbjct: 195 YGDSLVVLVATLVALLDICFILIAVPESLSEKI-RPASWGAQISWKQADPFASLK-KVGK 252
Query: 231 KIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLVYI 273
S LIC + F S L E G +SF +Y+
Sbjct: 253 D--STVLLIC------------ITVFLSYLPEAGQYSSFFLYL 281
>sp|Q5SR56|HIAL1_HUMAN Hippocampus abundant transcript-like protein 1 OS=Homo sapiens
GN=HIATL1 PE=2 SV=3
Length = 506
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 98/222 (44%), Gaps = 23/222 (10%)
Query: 52 LSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYY 111
++G Q + GL + + P+IG LSD +GRK L + + P+ ++ R S +++A
Sbjct: 81 MNGLIQGVKGLLSFLSAPLIGALSDVWGRKPFLLGTVFFTCFPIPLM--RISPWWYFAMI 138
Query: 112 ALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTS 171
++ + ++ + AYVAD E +R++A+G + +AS V +LS +
Sbjct: 139 SVSGVFSVTF-----SVIFAYVADVTQEHERSTAYGWVSATFAASLVSSPAIGAYLSASY 193
Query: 172 AFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKK 231
+V+ + A F+ VP + + RP+ Q + + +K V K
Sbjct: 194 GDSLVVLVATVVALLDICFILVAVPESLPEKM-RPVSWGAQISWKQADPFASLK-KVGKD 251
Query: 232 IPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLVYI 273
S LIC + F S L E G +SF +Y+
Sbjct: 252 --STVLLIC------------ITVFLSYLPEAGQYSSFFLYL 279
>sp|P02980|TCR2_ECOLX Tetracycline resistance protein, class B OS=Escherichia coli
GN=tetA PE=1 SV=1
Length = 401
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 18/179 (10%)
Query: 58 AIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLT 117
A+ L ++ P +G +SD++GR+ +L L L + + +LA+ ++ Y L +T
Sbjct: 48 ALYALMQVIFAPWLGKMSDRFGRRPVLLLSLIGASLDYLLLAFSSALWMLYLGRLLSGIT 107
Query: 118 AMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF---LSTTSAFQ 174
G+ +A + +AD S QR FG L + G + F +S S F
Sbjct: 108 -----GATGAVAASVIADTTSASQRVKWFGWLGASFGLGLIAGPIIGGFAGEISPHSPFF 162
Query: 175 AATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIP 233
A +++++ + + ++ D+ D TE + +SNS V I + K +P
Sbjct: 163 IAALLNIVTFLVVMFWFRETKNTRDNTD---------TEVGVETQSNS-VYITLFKTMP 211
>sp|A4IF94|HIAL1_BOVIN Hippocampus abundant transcript-like protein 1 OS=Bos taurus
GN=HIATL1 PE=2 SV=1
Length = 502
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 98/222 (44%), Gaps = 23/222 (10%)
Query: 52 LSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYY 111
++G Q + GL + + P+IG LSD +GRK L + + P+ ++ R S +++A
Sbjct: 78 MNGLIQGVKGLLSFLSAPLIGALSDVWGRKPFLLGTVFFTCFPIPLM--RISPWWYFAMI 135
Query: 112 ALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTS 171
++ + ++ + AYVAD E +R++A+G + +AS V +LS +
Sbjct: 136 SISGVFSVTFS-----VIFAYVADVTQEHERSTAYGWVSATFAASLVSSPAIGAYLSASY 190
Query: 172 AFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKK 231
+V+ + A F+ VP + + RP+ Q + + +K V K
Sbjct: 191 GDSLVVLVATVVALLDICFILLAVPESLPEKM-RPLSWGARISWKQADPFASLK-KVGKD 248
Query: 232 IPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLVYI 273
S LIC + F S L E G +SF +Y+
Sbjct: 249 --STILLIC------------ITVFLSYLPEAGQYSSFFLYL 276
>sp|B2RYH9|HIAL1_RAT Hippocampus abundant transcript-like protein 1 OS=Rattus norvegicus
GN=Hiatl1 PE=2 SV=1
Length = 507
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 52 LSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYY 111
++G Q + GL + + P+IG LSD +GRK L + + P+ ++ R S +++
Sbjct: 83 MNGLIQGVKGLLSFLSAPLIGALSDVWGRKPFLLGTVFFTCFPIPLM--RISPWWYFGMI 140
Query: 112 ALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTT 170
++ + ++ + AYVAD E +R++A+G + +AS V +LS+
Sbjct: 141 SVSGVFSVTF-----SVIFAYVADFTQEHERSTAYGWVSATFAASLVSSPAIGTYLSSN 194
>sp|P71678|MFS55_MYCTU MFS-type drug efflux transporter P55 OS=Mycobacterium tuberculosis
GN=Rv1410c PE=1 SV=1
Length = 518
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 62 LGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVC 121
LG + MP++G SD++GRK ML + L II + A F+ A RT+ V
Sbjct: 56 LGYIAAMPLLGRASDRFGRKLMLQVSLAGFIIGSVVTALAGHFGDFHMLIAGRTIQG-VA 114
Query: 122 EGSINCLALAYVADNISERQRASAFG 147
G++ + LA AD S+R RA G
Sbjct: 115 SGALLPITLALGADLWSQRNRAGVLG 140
>sp|C6DTH3|MFS55_MYCTK MFS-type drug efflux transporter P55 OS=Mycobacterium tuberculosis
(strain KZN 1435 / MDR) GN=TBMG_02570 PE=3 SV=1
Length = 518
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 62 LGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVC 121
LG + MP++G SD++GRK ML + L II + A F+ A RT+ V
Sbjct: 56 LGYIAAMPLLGRASDRFGRKLMLQVSLAGFIIGSVVTALAGHFGDFHMLIAGRTIQG-VA 114
Query: 122 EGSINCLALAYVADNISERQRASAFG 147
G++ + LA AD S+R RA G
Sbjct: 115 SGALLPITLALGADLWSQRNRAGVLG 140
>sp|A5WM93|MFS55_MYCTF MFS-type drug efflux transporter P55 OS=Mycobacterium tuberculosis
(strain F11) GN=TBFG_11439 PE=3 SV=1
Length = 518
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 62 LGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVC 121
LG + MP++G SD++GRK ML + L II + A F+ A RT+ V
Sbjct: 56 LGYIAAMPLLGRASDRFGRKLMLQVSLAGFIIGSVVTALAGHFGDFHMLIAGRTIQG-VA 114
Query: 122 EGSINCLALAYVADNISERQRASAFG 147
G++ + LA AD S+R RA G
Sbjct: 115 SGALLPITLALGADLWSQRNRAGVLG 140
>sp|A5U2B2|MFS55_MYCTA MFS-type drug efflux transporter P55 OS=Mycobacterium tuberculosis
(strain ATCC 25177 / H37Ra) GN=MRA_1419 PE=3 SV=1
Length = 518
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 62 LGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVC 121
LG + MP++G SD++GRK ML + L II + A F+ A RT+ V
Sbjct: 56 LGYIAAMPLLGRASDRFGRKLMLQVSLAGFIIGSVVTALAGHFGDFHMLIAGRTIQG-VA 114
Query: 122 EGSINCLALAYVADNISERQRASAFG 147
G++ + LA AD S+R RA G
Sbjct: 115 SGALLPITLALGADLWSQRNRAGVLG 140
>sp|C1AN55|MFS55_MYCBT MFS-type drug efflux transporter P55 OS=Mycobacterium bovis (strain
BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=JTY_1446
PE=3 SV=1
Length = 518
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 62 LGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVC 121
LG + MP++G SD++GRK ML + L II + A F+ A RT+ V
Sbjct: 56 LGYIAAMPLLGRASDRFGRKLMLQVSLAGFIIGSVVTALAGHFGDFHMLIAGRTIQG-VA 114
Query: 122 EGSINCLALAYVADNISERQRASAFG 147
G++ + LA AD S+R RA G
Sbjct: 115 SGALLPITLALGADLWSQRNRAGVLG 140
>sp|A1KIJ9|MFS55_MYCBP MFS-type drug efflux transporter P55 OS=Mycobacterium bovis (strain
BCG / Pasteur 1173P2) GN=BCG_1471c PE=1 SV=1
Length = 518
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 62 LGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVC 121
LG + MP++G SD++GRK ML + L II + A F+ A RT+ V
Sbjct: 56 LGYIAAMPLLGRASDRFGRKLMLQVSLAGFIIGSVVTALAGHFGDFHMLIAGRTIQG-VA 114
Query: 122 EGSINCLALAYVADNISERQRASAFG 147
G++ + LA AD S+R RA G
Sbjct: 115 SGALLPITLALGADLWSQRNRAGVLG 140
>sp|Q7U042|MFS55_MYCBO MFS-type drug efflux transporter P55 OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=Mb1445c PE=3 SV=1
Length = 518
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 62 LGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVC 121
LG + MP++G SD++GRK ML + L II + A F+ A RT+ V
Sbjct: 56 LGYIAAMPLLGRASDRFGRKLMLQVSLAGFIIGSVVTALAGHFGDFHMLIAGRTIQG-VA 114
Query: 122 EGSINCLALAYVADNISERQRASAFG 147
G++ + LA AD S+R RA G
Sbjct: 115 SGALLPITLALGADLWSQRNRAGVLG 140
>sp|P02981|TCR3_ECOLX Tetracycline resistance protein, class C OS=Escherichia coli
GN=tetA PE=1 SV=1
Length = 396
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 5/103 (4%)
Query: 69 PVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCL 128
PV+G LSD++GR+ +L L + I AI+A + + YA R + + G+ +
Sbjct: 61 PVLGALSDRFGRRPVLLASLLGATIDYAIMA---TTPVLWILYAGRIVAGI--TGATGAV 115
Query: 129 ALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTS 171
A AY+AD RA FG++ V G +A L S
Sbjct: 116 AGAYIADITDGEDRARHFGLMSACFGVGMVAGPVAGGLLGAIS 158
>sp|P51563|TCR7_VIBAN Tetracycline resistance protein, class G OS=Vibrio anguillarum
GN=tetA PE=3 SV=1
Length = 393
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 10/146 (6%)
Query: 65 LVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGS 124
+V P++G LSD YGR+ +L L + + I+A S + Y R ++ + G+
Sbjct: 55 VVFAPMLGQLSDSYGRRPVLLASLAGAAVDYTIMA---SAPVLWVLYIGRLVSGV--TGA 109
Query: 125 INCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTSA---FQAATIVSM 181
+A + +AD+ E RA FG + A + G L SA F AA +++
Sbjct: 110 TGAVAASTIADSTGEGSRARWFGYMGACYGAGMIAGPALGGMLGGISAHAPFIAAALLNG 169
Query: 182 LAAAYMRVFLKDDVPNDDDDDLTRPI 207
A +FLK+ + +P+
Sbjct: 170 FAFLLACIFLKET--HHSHGGTGKPV 193
>sp|P02982|TCR1_ECOLX Tetracycline resistance protein, class A OS=Escherichia coli
GN=tetA PE=3 SV=2
Length = 399
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 69 PVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCL 128
PV+G LSD++GR+ +L + L + + AI+A + F + Y R + + G+ +
Sbjct: 61 PVLGALSDRFGRRPVLLVSLAGAAVDYAIMA---TAPFLWVLYIGRIVAGIT--GATGAV 115
Query: 129 ALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLS 168
A AY+AD +RA FG +SA F G +A L
Sbjct: 116 AGAYIADITDGDERARHFGF----MSACFGFGMVAGPVLG 151
>sp|P39843|BMR2_BACSU Multidrug resistance protein 2 OS=Bacillus subtilis (strain 168)
GN=blt PE=3 SV=1
Length = 400
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 10/175 (5%)
Query: 54 GFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYAL 113
G+ A + L+ P G D++GRK M+ L L + + I +S FY L
Sbjct: 48 GYLVAAFAISQLITSPFAGRWVDRFGRKKMIILGLLIFSLSELIFGLGTHVSIFYFSRIL 107
Query: 114 RTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTSA- 172
++A ++ AYVAD + ++R+ A G + +S F+ G A F++
Sbjct: 108 GGVSAAFIMPAVT----AYVADITTLKERSKAMGYVSAAISTGFIIGPGAGGFIAGFGIR 163
Query: 173 --FQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQ-NESNSPV 224
F A+ ++++AA LK+ + ++ L+ T+E+ + S PV
Sbjct: 164 MPFFFASAIALIAAVTSVFILKESLSIEERHQLSSH--TKESNFIKDLKRSIHPV 216
>sp|Q9D2V8|MFS10_MOUSE Major facilitator superfamily domain-containing protein 10 OS=Mus
musculus GN=Mfsd10 PE=2 SV=1
Length = 456
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 5/131 (3%)
Query: 69 PVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCL 128
P+ G SD GR+ ++ L LT I A+ A RS F A+ A R + + +G++N L
Sbjct: 106 PLTGAASDYLGRRPVMMLSLTGLAISYAVWATSRS---FKAFLASRVIGG-ISKGNVN-L 160
Query: 129 ALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTSAFQAATIVSMLAAAYMR 188
+ A VAD S R+ ++ S +F G + FLS + + ++ ++
Sbjct: 161 STAIVADLGSPPTRSQGMAVIGVAFSLAFTLGPMLGAFLSVEMVPWISLLFAISDMLFIF 220
Query: 189 VFLKDDVPNDD 199
FL + +P +
Sbjct: 221 CFLPETLPQEK 231
>sp|Q07282|TCR5_ECOLX Tetracycline resistance protein, class E OS=Escherichia coli
GN=tetA PE=3 SV=1
Length = 405
Score = 39.3 bits (90), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 71/158 (44%), Gaps = 11/158 (6%)
Query: 65 LVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGS 124
++ P++G SD+ GR+ +L L L + + A++A + S + Y R + + G+
Sbjct: 55 VIFAPLLGRWSDRIGRRPVLLLSLLGATLDYALMA---TASVVWVLYLGRLIAGI--TGA 109
Query: 125 INCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF---LSTTSAFQAATIVSM 181
+A + +AD E R FG++ + G + F LS + F A ++
Sbjct: 110 TGAVAASTIADVTPEESRTHWFGMMGACFGGGMIAGPVIGGFAGQLSVQAPFMFAAAING 169
Query: 182 LAAAYMRVFLKDDVPNDDD--DDLTRPIITEETEGVNQ 217
L A + +F+ + N + D+L I E T + +
Sbjct: 170 L-AFLVSLFILHETHNANQVSDELKNETINETTSSIRE 206
>sp|Q80UJ1|S22AK_MOUSE Solute carrier family 22 member 20 OS=Mus musculus GN=Slc22a20 PE=1
SV=1
Length = 556
Score = 38.9 bits (89), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 53/113 (46%), Gaps = 12/113 (10%)
Query: 52 LSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAIL-AYRRSISFFYAY 110
L Q+I G LV + G L+D+ GRKA PL S + LA+ A + F AY
Sbjct: 135 LRDLAQSIYMSGVLVGAALFGGLADRLGRKA----PLVWSYLQLAVSGAATAYVGSFSAY 190
Query: 111 YALRTLTAMVCEGSI-NCLALAYVADNISERQRASAFGILLGVLSASFVCGTL 162
R L M G I N L+L V + + R R A GILLG SF G L
Sbjct: 191 CVFRFLMGMTFSGIILNSLSL--VVEWMPTRGRTVA-GILLGF---SFTLGQL 237
>sp|P0A4K5|PMRA_STRR6 Multi-drug resistance efflux pump PmrA OS=Streptococcus pneumoniae
(strain ATCC BAA-255 / R6) GN=pmrA PE=3 SV=1
Length = 399
Score = 38.1 bits (87), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 79/191 (41%), Gaps = 23/191 (12%)
Query: 42 GLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYR 101
G+ +A Y +G ++ + + P+ G L+D+YGRK M+ I + LA+
Sbjct: 39 GVGSQQVAFY-AGLAISVSAISAALFSPIWGILADKYGRKPMMIRAGLAMTITMGGLAFV 97
Query: 102 RSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAF-----GILLGVLSAS 156
+I Y LR L + N AL +A + + + SA G++ G L+
Sbjct: 98 PNI---YWLIFLRLLNGVFAGFVPNATAL--IASQVPKEKSGSALGTLSTGVVAGTLTGP 152
Query: 157 FVCGTLAARFLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVN 216
F+ G +A F + F LAA F+K+D +P+ E+ +
Sbjct: 153 FIGGFIAELF-GIRTVFLLVGSFLFLAAILTICFIKEDF---------QPVAKEKA--IP 200
Query: 217 QNESNSPVKIP 227
E + VK P
Sbjct: 201 TKELFTSVKYP 211
>sp|P0A4K4|PMRA_STRPN Multi-drug resistance efflux pump PmrA OS=Streptococcus pneumoniae
serotype 4 (strain ATCC BAA-334 / TIGR4) GN=pmrA PE=3
SV=1
Length = 399
Score = 38.1 bits (87), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 79/191 (41%), Gaps = 23/191 (12%)
Query: 42 GLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYR 101
G+ +A Y +G ++ + + P+ G L+D+YGRK M+ I + LA+
Sbjct: 39 GVGSQQVAFY-AGLAISVSAISAALFSPIWGILADKYGRKPMMIRAGLAMTITMGGLAFV 97
Query: 102 RSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAF-----GILLGVLSAS 156
+I Y LR L + N AL +A + + + SA G++ G L+
Sbjct: 98 PNI---YWLIFLRLLNGVFAGFVPNATAL--IASQVPKEKSGSALGTLSTGVVAGTLTGP 152
Query: 157 FVCGTLAARFLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVN 216
F+ G +A F + F LAA F+K+D +P+ E+ +
Sbjct: 153 FIGGFIAELF-GIRTVFLLVGSFLFLAAILTICFIKEDF---------QPVAKEKA--IP 200
Query: 217 QNESNSPVKIP 227
E + VK P
Sbjct: 201 TKELFTSVKYP 211
>sp|P39637|YWFA_BACSU Uncharacterized MFS-type transporter YwfA OS=Bacillus subtilis
(strain 168) GN=ywfA PE=3 SV=1
Length = 412
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 29/180 (16%)
Query: 4 EKEIKTLSH--------LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGF 55
+IKT H L + VF G +++ P + D +A D LA+ +S
Sbjct: 6 NNDIKTKHHFPLLLALALTMGVFAAGSEELVISPLLPD---LAKAFSSDVSVLALSIS-- 60
Query: 56 QQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRT 115
I G+ + P++ L D+Y R+ L L + II I A ++I FF+ AL
Sbjct: 61 ---IYGVMIFIGAPLLVPLGDKYSRELSLLAGLMIFIIGTVICALAQNIFFFFLGRALSG 117
Query: 116 LTAMVCEGSINCLALAYVADNISERQRASAFGILL---------GVLSASFVCGTLAARF 166
L A G+ A A V D + R G+++ GV SF+ G L R+
Sbjct: 118 LAA----GAFVPTAYAVVGDRVPYTYRGKVMGLIVSSWSLALIFGVPLGSFIGGVLHWRW 173
>sp|Q9R1U7|S22A8_RAT Solute carrier family 22 member 8 OS=Rattus norvegicus GN=Slc22a8
PE=2 SV=1
Length = 536
Score = 35.8 bits (81), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 57 QAIIGLGTLVMMPVIGNLSDQYGRKAMLT 85
Q+I G LV PVIG LSD++GRK +LT
Sbjct: 126 QSIFMAGILVGGPVIGELSDRFGRKPILT 154
>sp|P33733|TCR4_SALOR Tetracycline resistance protein, class D OS=Salmonella ordonez
GN=tetA PE=3 SV=1
Length = 394
Score = 35.8 bits (81), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 58/142 (40%), Gaps = 13/142 (9%)
Query: 69 PVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCL 128
P++G SD+ GR+ +L L L + +LA + Y + +T G+ +
Sbjct: 59 PLLGRWSDKLGRRPVLLLSLAGAAFDYTLLALSNVLWMLYLGRIISGIT-----GATGAV 113
Query: 129 ALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTSAFQAATIVSML-AAAYM 187
A + VAD+ + +R + FG L A + G S I ++L A ++
Sbjct: 114 AASVVADSTAVSERTAWFGRLGAAFGAGLIAGPAIGGLAGDISPHLPFVIAAILNACTFL 173
Query: 188 RVFL-------KDDVPNDDDDD 202
VF ++ P D+ +
Sbjct: 174 MVFFIFKPAVQTEEKPADEKQE 195
>sp|P33449|BMR1_BACSU Multidrug resistance protein 1 OS=Bacillus subtilis (strain 168)
GN=bmr PE=3 SV=2
Length = 389
Score = 35.4 bits (80), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 62/145 (42%), Gaps = 12/145 (8%)
Query: 3 MEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGL 62
MEK+ TL+ L +F+ +V+P + ++E L+ G+ A +
Sbjct: 1 MEKKNITLTILLTNLFIAFLGIGLVIPVTPTI--------MNELHLSGTAVGYMVACFAI 52
Query: 63 GTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCE 122
L++ P+ G D++GRK M+ + L + + +++ + L ++A
Sbjct: 53 TQLIVSPIAGRWVDRFGRKIMIVIGLLFFSVSEFLFGIGKTVEMLFISRMLGGISAAFIM 112
Query: 123 GSINCLALAYVADNISERQRASAFG 147
+ A++AD + + R A G
Sbjct: 113 PGVT----AFIADITTIKTRPKALG 133
>sp|P57538|Y466_BUCAI Uncharacterized transporter BU466 OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain APS) GN=BU466 PE=3 SV=1
Length = 390
Score = 34.3 bits (77), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 76/185 (41%), Gaps = 20/185 (10%)
Query: 23 ATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKA 82
M++P ++ M L G ++ +L G I G+ ++ G LSD++ RK
Sbjct: 22 GMFMILPILSKYGM--LLDGGNK-----FLIGLSMGIYGISQVIFQIPFGILSDKFNRKK 74
Query: 83 MLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQR 142
++ L L + I I A SI + L G+I+ + +A+++D I E R
Sbjct: 75 IILLGLFMFFIGNIISASIHSI------WGLIIGRFFQGSGAISGVCMAFLSDLIREENR 128
Query: 143 ASAFGILLGVLSASF----VCGTLAARFLSTTSAFQAA---TIVSMLAAAYMRVFLKDDV 195
+ + + SF V G + + S F + +IV M+ + F K ++
Sbjct: 129 VKSIAAIGVSFAISFLIAVVSGPIIVHYFGFFSIFWISAFLSIVCMIIVCFFVPFSKKNI 188
Query: 196 PNDDD 200
+
Sbjct: 189 LKQNK 193
>sp|O88909|S22A8_MOUSE Solute carrier family 22 member 8 OS=Mus musculus GN=Slc22a8 PE=2
SV=2
Length = 537
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 57 QAIIGLGTLVMMPVIGNLSDQYGRKAMLT 85
Q++ G LV PV G LSD++GRK +LT
Sbjct: 126 QSVFMAGILVGGPVFGELSDRFGRKPILT 154
>sp|P37498|YYBF_BACSU Uncharacterized MFS-type transporter YybF OS=Bacillus subtilis
(strain 168) GN=yybF PE=3 SV=1
Length = 404
Score = 32.7 bits (73), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 12/125 (9%)
Query: 66 VMMPVIGNLSDQYGRKAMLTLP-LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGS 124
V M V G+LS+ +GRK ++ + L S++ LA A+ S F+ LRT+ + G
Sbjct: 63 VSMLVFGSLSEVWGRKPIMGISMLAASVLCLAS-AFSPS---FHTLLVLRTIQGVALAG- 117
Query: 125 INCLALAYVADNISERQRASAFGIL-----LGVLSASFVCGTLAARFLSTTSAFQAATIV 179
+ +A+AY+ + I SA G+ +G + V G L + +L+ A ++
Sbjct: 118 LPSIAMAYLGEEIEPGSLGSAMGLYISGNAIGAVFGRIVSGLL-SEYLNWHMAMGTIGVI 176
Query: 180 SMLAA 184
S++A+
Sbjct: 177 SLIAS 181
>sp|A8WGF7|SPNS1_XENTR Protein spinster homolog 1 OS=Xenopus tropicalis GN=spns1 PE=2 SV=2
Length = 526
Score = 32.7 bits (73), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 11/118 (9%)
Query: 53 SGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYA 112
SG Q + + + PV G L D+Y RK ++ + ++ + + +L+ S +F+ +
Sbjct: 97 SGLVQTVFICSYMFLAPVFGYLGDRYNRKLIMCIGISFWSL-VTLLSSFVSKQYFWLFLL 155
Query: 113 LRTLTAMVCEGSINCLALAYVADNISERQR---------ASAFGILLGVLSASFVCGT 161
R L V E S + +A +AD QR A+ G LG ++ S V T
Sbjct: 156 TRGLVG-VGEASYSTIAPTIIADLFLADQRSRMLSFFYFATPVGCGLGYIAGSKVTST 212
>sp|O31563|YFIU_BACSU Uncharacterized MFS-type transporter YfiU OS=Bacillus subtilis
(strain 168) GN=yfiU PE=3 SV=1
Length = 518
Score = 32.7 bits (73), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 59/130 (45%), Gaps = 5/130 (3%)
Query: 62 LGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVC 121
LG V +P++G LSD+YGRK + + + L + ++A +S F ++ L
Sbjct: 59 LGLSVSVPIVGKLSDRYGRKKLFLIEVCLFGLGSLLVALSQSFPLFLISRLIQALGGGGI 118
Query: 122 EGSINCLALAYVADNISERQRASAFGILLGVLSASFVCG-TLAARFLSTTSAFQAATIVS 180
+ LA + + ++ A G+L + + V G + + L T ++ +++
Sbjct: 119 FIIGSSHILA----TLPKEKQGKALGLLGAMNGMAAVLGPNIGSFLLDWTGSWHWLFLIN 174
Query: 181 MLAAAYMRVF 190
+ A + VF
Sbjct: 175 LPIAVLLVVF 184
>sp|Q6GIU7|NORA_STAAR Quinolone resistance protein NorA OS=Staphylococcus aureus (strain
MRSA252) GN=norA PE=3 SV=1
Length = 388
Score = 32.7 bits (73), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 74/169 (43%), Gaps = 15/169 (8%)
Query: 3 MEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGL 62
M K+I L + +FL +V+P + V + L GL L + ++ F L
Sbjct: 1 MNKQIFVL---YFNIFLIFLGIGLVIP-VLPVYLKDL--GLTGSDLGLLVAAFA-----L 49
Query: 63 GTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCE 122
+++ P G L+D+ G+K ++ + L L ++ + ++ ++ L + +
Sbjct: 50 SQMIISPFGGTLADKLGKKLIICIGLIL----FSVSEFMFAVGHNFSVLMLSRVIGGMSA 105
Query: 123 GSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTS 171
G + +AD Q+A FG + ++++ F+ G F++ S
Sbjct: 106 GMVMPGVTGLIADVSPSHQKAKNFGYMSAIINSGFILGPGIGGFMAEVS 154
>sp|Q0P5M9|MFS10_BOVIN Major facilitator superfamily domain-containing protein 10 OS=Bos
taurus GN=MFSD10 PE=2 SV=1
Length = 456
Score = 32.7 bits (73), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 5/151 (3%)
Query: 49 AIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFY 108
++ G ++ L + P+ G LSD GR+ + L L A+ A +S F
Sbjct: 86 SVLFGGLIGSVFSLLQFLSAPLTGALSDCLGRRPGMLLSLAGVATSYAVWAASKS---FA 142
Query: 109 AYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLS 168
A+ A R + + +G+++ L A VAD S R+ ++ S F G FL
Sbjct: 143 AFLASRVIGG-ISKGNVS-LCTAIVADLGSPSARSKGMAVIGVAFSLGFTLGPTLGAFLP 200
Query: 169 TTSAFQAATIVSMLAAAYMRVFLKDDVPNDD 199
+ + A + ++ ++ FL + +P +
Sbjct: 201 SETVPWLALLFAVSDLLFIWCFLPETLPPEK 231
>sp|Q5HHX4|NORA_STAAC Quinolone resistance protein NorA OS=Staphylococcus aureus (strain
COL) GN=norA PE=3 SV=1
Length = 388
Score = 32.7 bits (73), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 74/169 (43%), Gaps = 15/169 (8%)
Query: 3 MEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGL 62
M K+I L + +FL +V+P + V + L GL L + ++ F L
Sbjct: 1 MNKQIFVL---YFNIFLIFLGIGLVIP-VLPVYLKDL--GLTGSDLGLLVAAFA-----L 49
Query: 63 GTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCE 122
+++ P G L+D+ G+K ++ + L L ++ + ++ ++ L + +
Sbjct: 50 SQMIISPFGGTLADKLGKKLIICIGLIL----FSVSEFMFAVGHNFSVLMLSRVIGGMSA 105
Query: 123 GSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTS 171
G + +AD Q+A FG + ++++ F+ G F++ S
Sbjct: 106 GMVMPGVTGLIADISPSHQKAKNFGYMSAIINSGFILGPGIGGFMAEVS 154
>sp|Q6GBD5|NORA_STAAS Quinolone resistance protein NorA OS=Staphylococcus aureus (strain
MSSA476) GN=norA PE=3 SV=1
Length = 388
Score = 32.7 bits (73), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 74/169 (43%), Gaps = 15/169 (8%)
Query: 3 MEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGL 62
M K+I L + +FL +V+P + V + L GL L + ++ F L
Sbjct: 1 MNKQIFVL---YFNIFLIFLGIGLVIP-VLPVYLKDL--GLTGSDLGLLVAAFA-----L 49
Query: 63 GTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCE 122
+++ P G L+D+ G+K ++ + L L ++ + ++ ++ L + +
Sbjct: 50 SQMIISPFGGTLADKLGKKLIICIGLIL----FSVSEFMFAVGHNFSVLMLSRVIGGMSA 105
Query: 123 GSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTS 171
G + +AD Q+A FG + ++++ F+ G F++ S
Sbjct: 106 GMVMPGVTGLIADISPSHQKAKNFGYMSAIINSGFILGPGIGGFMAEVS 154
>sp|P0A0J6|NORA_STAAW Quinolone resistance protein NorA OS=Staphylococcus aureus (strain
MW2) GN=norA PE=3 SV=1
Length = 388
Score = 32.7 bits (73), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 74/169 (43%), Gaps = 15/169 (8%)
Query: 3 MEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGL 62
M K+I L + +FL +V+P + V + L GL L + ++ F L
Sbjct: 1 MNKQIFVL---YFNIFLIFLGIGLVIP-VLPVYLKDL--GLTGSDLGLLVAAFA-----L 49
Query: 63 GTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCE 122
+++ P G L+D+ G+K ++ + L L ++ + ++ ++ L + +
Sbjct: 50 SQMIISPFGGTLADKLGKKLIICIGLIL----FSVSEFMFAVGHNFSVLMLSRVIGGMSA 105
Query: 123 GSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTS 171
G + +AD Q+A FG + ++++ F+ G F++ S
Sbjct: 106 GMVMPGVTGLIADISPSHQKAKNFGYMSAIINSGFILGPGIGGFMAEVS 154
>sp|P0A0J7|NORA_STAAU Quinolone resistance protein NorA OS=Staphylococcus aureus GN=norA
PE=3 SV=1
Length = 388
Score = 32.7 bits (73), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 74/169 (43%), Gaps = 15/169 (8%)
Query: 3 MEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGL 62
M K+I L + +FL +V+P + V + L GL L + ++ F L
Sbjct: 1 MNKQIFVL---YFNIFLIFLGIGLVIP-VLPVYLKDL--GLTGSDLGLLVAAFA-----L 49
Query: 63 GTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCE 122
+++ P G L+D+ G+K ++ + L L ++ + ++ ++ L + +
Sbjct: 50 SQMIISPFGGTLADKLGKKLIICIGLIL----FSVSEFMFAVGHNFSVLMLSRVIGGMSA 105
Query: 123 GSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTS 171
G + +AD Q+A FG + ++++ F+ G F++ S
Sbjct: 106 GMVMPGVTGLIADISPSHQKAKNFGYMSAIINSGFILGPGIGGFMAEVS 154
>sp|P0A0J5|NORA_STAAN Quinolone resistance protein NorA OS=Staphylococcus aureus (strain
N315) GN=norA PE=3 SV=1
Length = 388
Score = 32.7 bits (73), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 74/169 (43%), Gaps = 15/169 (8%)
Query: 3 MEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGL 62
M K+I L + +FL +V+P + V + L GL L + ++ F L
Sbjct: 1 MNKQIFVL---YFNIFLIFLGIGLVIP-VLPVYLKDL--GLTGSDLGLLVAAFA-----L 49
Query: 63 GTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCE 122
+++ P G L+D+ G+K ++ + L L ++ + ++ ++ L + +
Sbjct: 50 SQMIISPFGGTLADKLGKKLIICIGLIL----FSVSEFMFAVGHNFSVLMLSRVIGGMSA 105
Query: 123 GSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTS 171
G + +AD Q+A FG + ++++ F+ G F++ S
Sbjct: 106 GMVMPGVTGLIADISPSHQKAKNFGYMSAIINSGFILGPGIGGFMAEVS 154
>sp|P0A0J4|NORA_STAAM Quinolone resistance protein NorA OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=norA PE=3 SV=1
Length = 388
Score = 32.7 bits (73), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 74/169 (43%), Gaps = 15/169 (8%)
Query: 3 MEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGL 62
M K+I L + +FL +V+P + V + L GL L + ++ F L
Sbjct: 1 MNKQIFVL---YFNIFLIFLGIGLVIP-VLPVYLKDL--GLTGSDLGLLVAAFA-----L 49
Query: 63 GTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCE 122
+++ P G L+D+ G+K ++ + L L ++ + ++ ++ L + +
Sbjct: 50 SQMIISPFGGTLADKLGKKLIICIGLIL----FSVSEFMFAVGHNFSVLMLSRVIGGMSA 105
Query: 123 GSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTS 171
G + +AD Q+A FG + ++++ F+ G F++ S
Sbjct: 106 GMVMPGVTGLIADISPSHQKAKNFGYMSAIINSGFILGPGIGGFMAEVS 154
>sp|Q2XWK0|SVOP_XENLA Synaptic vesicle 2-related protein OS=Xenopus laevis GN=svop PE=2
SV=1
Length = 548
Score = 32.3 bits (72), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 69/173 (39%), Gaps = 27/173 (15%)
Query: 18 FLWGFATMMVVPAITDVTMMA----LCPGLD-ECSLAIYLSGFQQAIIGLGTLVMMPVIG 72
F W + + + + D M L P L E L + +++ +G + + G
Sbjct: 82 FQWKLSMLTGLAWMADAMEMMILSILAPQLHCEWRLPSWQVALLTSVVFIGMMASSSLWG 141
Query: 73 NLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYA----LRTLTAMVCEGSINCL 128
N+SDQYGR+ L + + ++ Y +S F Y+ LR L G +
Sbjct: 142 NVSDQYGRRTGLKISVIWTL-------YYGILSAFAPVYSWILVLRGLVGFGIGGVPQSV 194
Query: 129 ALAYVADNISERQRAS---------AFGILLGVLSASFVCGTLAARFLSTTSA 172
L A+ + + RA A G + VL A FV TL R+L SA
Sbjct: 195 TL--YAEFLPMKSRAKCILLIEIFWALGTVFEVLLAIFVMPTLGWRWLLILSA 245
>sp|Q63564|SV2B_RAT Synaptic vesicle glycoprotein 2B OS=Rattus norvegicus GN=Sv2b PE=1
SV=1
Length = 683
Score = 32.3 bits (72), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 122/293 (41%), Gaps = 49/293 (16%)
Query: 3 MEKEIKTLSHLFVTV--------FLWGFATMMVVPAITD-----VTMMALCPGLDECSLA 49
ME E + L+H + T+ F W ++V+ + D V AL + L+
Sbjct: 85 MEDE-EQLAHQYETIIDECGHGRFQWTLFFVLVLALMADGVEVFVVSFALPSAEKDMCLS 143
Query: 50 IYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYA 109
G I+ LG + ++G L+D+ GRK +L++ L ++ ++ ++ + + A
Sbjct: 144 SSKKGMLGLIVYLGMMAGAFILGGLADKLGRKKVLSMSLAINASFASLSSF---VQGYGA 200
Query: 110 YYALRTLTAMVCEGSINCLALAYVADNISERQRA---SAFGILL--GVLSASFVCGTLAA 164
+ R ++ + GS+ + AY ++ +S +R S GI G + AS + ++
Sbjct: 201 FLFCRLISGIGIGGSLP-IVFAYFSEFLSREKRGEHLSWLGIFWMTGGIYASAMAWSIIP 259
Query: 165 RF-----LSTTSAFQAATI----------VSMLAAAYMRV---FLKDDVPNDDDDDLTRP 206
+ + T F + + VSM+A +M FL + +D+
Sbjct: 260 HYGWGFSMGTNYHFHSWRVFVIVCALPATVSMVALKFMPESPRFLLEMGKHDE-----AW 314
Query: 207 IITEETEGVNQNESNSPVKIPVCKKIPSIR---DLICLLRSSVTLSQAAVVAF 256
+I ++ N +P K+ I + + + I + S+ T Q +V F
Sbjct: 315 MILKQVHDTNMRAKGTPEKVFTVSHIKTPKQMDEFIEIQSSTGTWYQRWLVRF 367
Score = 31.2 bits (69), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 18/134 (13%)
Query: 44 DECSLAIYLSGFQQAIIGLGTLVMMPVIGN-----LSDQYGRKAMLTLPLTLSIIPLAIL 98
++ IYL F LG+L ++P GN L D+ GR M+ + +S + L
Sbjct: 532 EDNDFLIYLVSF------LGSLSVLP--GNIISALLMDRIGRLKMIGGSMLISAVCCFFL 583
Query: 99 AYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFV 158
+ S S + L T++ +++ + + N QRA+AFGIL G+ +
Sbjct: 584 FFGNSESAMIGWQCLFCGTSIAAWNALDVITVELYPTN----QRATAFGILNGLCKLGAI 639
Query: 159 CG-TLAARFLSTTS 171
G T+ A F+ T
Sbjct: 640 LGNTIFASFVGITK 653
>sp|A6QLW8|S22A7_BOVIN Solute carrier family 22 member 7 OS=Bos taurus GN=SLC22A7 PE=2
SV=1
Length = 547
Score = 32.3 bits (72), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 56/121 (46%), Gaps = 16/121 (13%)
Query: 45 ECSLAIYLSGFQQAIIGL---GTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAI-LAY 100
E L G +AI G LV V G LSD++GR+ +L L + LA+ LA
Sbjct: 132 EWDLVCEQKGLNKAISTFFFAGVLVGAEVYGYLSDRFGRRRLL---LVAYVSSLALGLAS 188
Query: 101 RRSISFFYAYYAL-RTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVC 159
S+S Y +A+ RTLT M G + + + + R R A GVLS++F
Sbjct: 189 AASVS--YIMFAITRTLTGMALAG-FTIIVMPLELEWLDVRHRTVA-----GVLSSTFWT 240
Query: 160 G 160
G
Sbjct: 241 G 241
>sp|P46499|YLX3_CAEEL Uncharacterized protein F23F12.3 OS=Caenorhabditis elegans
GN=F23F12.3/F23F12.1 PE=3 SV=3
Length = 522
Score = 32.3 bits (72), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 10/100 (10%)
Query: 46 CSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSIS 105
C Y S + I +G LV V G+L D +GRK + + +++ II + S
Sbjct: 89 CGTKAYDSAWIATIQFIGALVGALVYGHLGDHFGRKPVSFVGISIGIIFGVASGFAPSWE 148
Query: 106 FFYAYYALRTLTAMVCEGSINCLAL---AYVADNISERQR 142
F + +C S+ C+ + AY+ + I QR
Sbjct: 149 VF-------AVLLFICGTSVACIMIVFYAYILEFIEPEQR 181
>sp|Q92367|AAP1_SCHPO Amino-acid permease 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=aap1 PE=3 SV=1
Length = 594
Score = 32.0 bits (71), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 66/156 (42%), Gaps = 19/156 (12%)
Query: 93 IPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGV 152
IP +L Y+ S + +YY + +C AL Y++ ++ SA+G +
Sbjct: 450 IPDTVLPYKFPGSVYLSYYGVLINFLALC-------ALVYISIFPVTHEKPSAYGFFVSF 502
Query: 153 LSASFVCGTLAARFLSTTSAFQAATIVSMLAAAY----MRVFLKDDVPND-DDDDLTRPI 207
L S L + FQ+ V + Y ++++ + ++ + DLT+P
Sbjct: 503 LGPSVFIAYLLISPIFVKPTFQSLKDVDLTTGRYDLVNSQMYVAESSTSELSEKDLTKPN 562
Query: 208 ITEETEGVNQN-ESNSPVKIPVCKK--IPSIRDLIC 240
+ +++ ESN+P + KK + + D +C
Sbjct: 563 LQSNDNKNSEDLESNTPPQ----KKSALQKVADFLC 594
>sp|Q7Z118|YMPB_CAEEL Putative transporter B0361.11 OS=Caenorhabditis elegans GN=B0361.11
PE=3 SV=2
Length = 578
Score = 32.0 bits (71), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 51 YLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAY 110
+ F I +G ++ +P + L+D+YGRK P+ ++ LA LA + SF +
Sbjct: 144 FFQEFGLTIFTIGAVIAVPFMSMLADRYGRK-----PIIVTTAILAFLA-NMAASFSPNF 197
Query: 111 YALRTLTAMVCEGSINCLALAYVA--DNISERQRA 143
L A + S + L++A VA + +SE+ RA
Sbjct: 198 AIFLILRAFIGACSDSYLSVASVATCEYLSEKARA 232
>sp|P51564|TCR8_PASMD Tetracycline resistance protein, class H OS=Pasteurella multocida
GN=tetA PE=3 SV=1
Length = 400
Score = 32.0 bits (71), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 43 LDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRR 102
+ E SLA + G A+ ++ P++G LSD+YGRK +L L + + ++A+
Sbjct: 34 VSENSLATHY-GVLLALYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFST 92
Query: 103 SISFFY 108
++ Y
Sbjct: 93 TLWMLY 98
>sp|A2CER7|SPNS3_DANRE Protein spinster homolog 3 OS=Danio rerio GN=spns3 PE=2 SV=1
Length = 498
Score = 31.6 bits (70), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Query: 53 SGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYA 112
SG Q + + + PV G L D+Y RK ++ + L + I+ ++ R S F+ A
Sbjct: 86 SGLLQTVFICSFMFLAPVFGYLGDRYDRKLIMIVGLVMWIVTTLGSSFVRK-SHFWVLVA 144
Query: 113 LRTLTAMVCEGSINCLALAYVADNISERQR 142
R L E S + +A + D + +R
Sbjct: 145 TRALVG-TGEASYSTIAPTIIGDLFAGSKR 173
>sp|Q5VZR4|HIAL2_HUMAN Hippocampus abundant transcript-like protein 2 OS=Homo sapiens
GN=HIATL2 PE=2 SV=1
Length = 134
Score = 31.6 bits (70), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 52 LSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAML 84
++G Q + GL + + P+IG LSD +GRK L
Sbjct: 81 MNGLIQGVKGLLSFLSAPLIGALSDVWGRKPFL 113
>sp|Q5XGK0|SPNS1_XENLA Protein spinster homolog 1 OS=Xenopus laevis GN=spns1 PE=2 SV=1
Length = 526
Score = 31.6 bits (70), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 53 SGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYA 112
SG Q + + + PV G L D+Y RK ++ + ++ + + +L+ S +F+ +
Sbjct: 97 SGLVQTVFICSYMFLAPVFGYLGDRYNRKLIMCVGISFWSL-VTLLSSFVSNQYFWLFLI 155
Query: 113 LRTLTAMVCEGSINCLALAYVADNISERQR 142
R L V E S + +A +AD QR
Sbjct: 156 TRGLVG-VGEASYSTIAPTIIADLFLADQR 184
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.137 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,075,216
Number of Sequences: 539616
Number of extensions: 3196630
Number of successful extensions: 12046
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 148
Number of HSP's that attempted gapping in prelim test: 11965
Number of HSP's gapped (non-prelim): 203
length of query: 273
length of database: 191,569,459
effective HSP length: 116
effective length of query: 157
effective length of database: 128,974,003
effective search space: 20248918471
effective search space used: 20248918471
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 60 (27.7 bits)