Query 024033
Match_columns 273
No_of_seqs 115 out of 1693
Neff 9.8
Searched_HMMs 46136
Date Fri Mar 29 08:26:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024033.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024033hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02824 hydrolase, alpha/beta 100.0 4.1E-39 8.9E-44 274.2 23.9 257 11-272 19-292 (294)
2 PRK10349 carboxylesterase BioH 100.0 6E-39 1.3E-43 267.8 23.3 245 12-271 4-253 (256)
3 TIGR02240 PHA_depoly_arom poly 100.0 6.5E-38 1.4E-42 264.5 19.5 245 11-272 13-264 (276)
4 PRK03592 haloalkane dehalogena 100.0 6E-37 1.3E-41 261.0 23.2 245 11-272 18-287 (295)
5 PLN02679 hydrolase, alpha/beta 100.0 8.1E-37 1.7E-41 266.8 22.9 252 11-272 73-355 (360)
6 PLN02965 Probable pheophorbida 100.0 5.9E-37 1.3E-41 255.8 20.9 233 23-273 5-252 (255)
7 TIGR01738 bioH putative pimelo 100.0 3.4E-36 7.4E-41 247.4 22.7 240 18-271 1-245 (245)
8 PRK00870 haloalkane dehalogena 100.0 1.4E-36 3.1E-41 259.6 19.8 246 10-272 34-299 (302)
9 PRK06489 hypothetical protein; 100.0 7.6E-36 1.6E-40 260.9 23.2 253 10-272 50-355 (360)
10 TIGR03343 biphenyl_bphD 2-hydr 100.0 2.2E-35 4.7E-40 249.5 23.8 255 2-272 11-281 (282)
11 PLN02578 hydrolase 100.0 3.3E-35 7.1E-40 256.3 24.8 250 11-272 77-353 (354)
12 PRK03204 haloalkane dehalogena 100.0 8.7E-36 1.9E-40 252.7 19.1 245 11-272 25-286 (286)
13 TIGR02427 protocat_pcaD 3-oxoa 100.0 3.3E-35 7.1E-40 242.2 22.0 249 11-272 1-251 (251)
14 PRK11126 2-succinyl-6-hydroxy- 100.0 1.3E-35 2.9E-40 245.3 18.8 232 21-272 2-240 (242)
15 KOG4178 Soluble epoxide hydrol 100.0 2.8E-35 6E-40 243.0 18.2 251 11-272 33-318 (322)
16 PRK10673 acyl-CoA esterase; Pr 100.0 1.1E-34 2.5E-39 241.5 21.6 234 20-272 15-253 (255)
17 TIGR03611 RutD pyrimidine util 100.0 5.5E-35 1.2E-39 242.5 18.5 246 12-272 1-256 (257)
18 TIGR03056 bchO_mg_che_rel puta 100.0 2.5E-34 5.5E-39 242.0 21.9 246 12-272 18-278 (278)
19 PRK08775 homoserine O-acetyltr 100.0 7.4E-35 1.6E-39 253.1 18.4 246 10-272 46-337 (343)
20 PLN03087 BODYGUARD 1 domain co 100.0 6E-34 1.3E-38 253.3 23.0 247 11-272 187-477 (481)
21 PRK07581 hypothetical protein; 100.0 5E-34 1.1E-38 247.6 20.8 257 10-272 26-334 (339)
22 PLN03084 alpha/beta hydrolase 100.0 2.2E-33 4.8E-38 245.0 23.9 250 11-272 116-382 (383)
23 TIGR01392 homoserO_Ac_trn homo 100.0 2.9E-33 6.3E-38 243.8 22.1 260 10-272 16-351 (351)
24 PRK00175 metX homoserine O-ace 100.0 6E-33 1.3E-37 243.9 23.0 261 11-272 34-372 (379)
25 PLN02385 hydrolase; alpha/beta 100.0 7.3E-33 1.6E-37 241.2 20.0 248 12-272 74-343 (349)
26 PF12697 Abhydrolase_6: Alpha/ 100.0 6.2E-33 1.3E-37 225.0 17.1 226 24-266 1-228 (228)
27 KOG1454 Predicted hydrolase/ac 100.0 1E-32 2.2E-37 235.9 18.2 239 20-272 57-322 (326)
28 KOG4409 Predicted hydrolase/ac 100.0 3.8E-32 8.3E-37 225.1 20.2 246 19-272 88-362 (365)
29 TIGR03695 menH_SHCHC 2-succiny 100.0 1.1E-31 2.4E-36 220.7 21.0 240 22-272 2-251 (251)
30 PLN02211 methyl indole-3-aceta 100.0 1.3E-31 2.8E-36 225.5 20.7 234 19-271 16-267 (273)
31 PLN02894 hydrolase, alpha/beta 100.0 5.3E-31 1.2E-35 232.8 24.0 249 20-272 104-383 (402)
32 PRK10749 lysophospholipase L2; 100.0 1.3E-30 2.8E-35 225.3 23.9 252 11-272 42-327 (330)
33 PHA02857 monoglyceride lipase; 100.0 7.4E-31 1.6E-35 221.4 20.9 243 11-272 12-271 (276)
34 PLN02980 2-oxoglutarate decarb 100.0 9.7E-31 2.1E-35 262.7 23.7 256 12-272 1360-1637(1655)
35 TIGR01250 pro_imino_pep_2 prol 100.0 4E-30 8.7E-35 216.4 22.6 251 11-272 13-288 (288)
36 PLN02298 hydrolase, alpha/beta 100.0 4.4E-30 9.6E-35 222.1 21.9 243 11-271 44-314 (330)
37 PRK14875 acetoin dehydrogenase 100.0 3.6E-29 7.8E-34 219.6 21.9 241 12-272 121-369 (371)
38 TIGR01249 pro_imino_pep_1 prol 100.0 4E-28 8.6E-33 207.8 22.4 237 11-256 16-290 (306)
39 PRK06765 homoserine O-acetyltr 100.0 3.6E-27 7.7E-32 206.4 24.8 262 10-272 41-386 (389)
40 PRK05855 short chain dehydroge 100.0 2.4E-28 5.2E-33 226.3 18.3 253 11-272 14-290 (582)
41 PLN02652 hydrolase; alpha/beta 100.0 1.9E-27 4.2E-32 208.8 21.2 233 20-272 135-385 (395)
42 KOG2984 Predicted hydrolase [G 100.0 3.8E-28 8.2E-33 185.9 11.9 236 10-272 31-274 (277)
43 PLN02511 hydrolase 99.9 4E-27 8.7E-32 207.3 15.0 241 20-272 99-363 (388)
44 COG1647 Esterase/lipase [Gener 99.9 3.6E-26 7.8E-31 177.9 17.5 222 21-272 15-242 (243)
45 KOG1455 Lysophospholipase [Lip 99.9 7.2E-26 1.6E-30 184.6 17.7 236 22-272 55-310 (313)
46 COG2267 PldB Lysophospholipase 99.9 6.7E-25 1.4E-29 186.0 18.3 235 22-271 35-291 (298)
47 KOG2382 Predicted alpha/beta h 99.9 1.7E-24 3.7E-29 179.3 18.8 231 21-272 52-311 (315)
48 TIGR01607 PST-A Plasmodium sub 99.9 5.5E-24 1.2E-28 183.8 21.0 252 12-272 10-331 (332)
49 PF00561 Abhydrolase_1: alpha/ 99.9 3.5E-25 7.6E-30 180.8 9.9 211 48-269 1-230 (230)
50 COG0596 MhpC Predicted hydrola 99.9 6.2E-23 1.3E-27 168.9 21.9 251 12-272 12-280 (282)
51 TIGR03100 hydr1_PEP hydrolase, 99.9 6.3E-23 1.4E-27 172.8 18.6 228 21-272 26-273 (274)
52 PRK10985 putative hydrolase; P 99.9 4E-23 8.6E-28 178.2 17.5 230 21-259 58-300 (324)
53 TIGR01838 PHA_synth_I poly(R)- 99.9 9.3E-23 2E-27 183.5 19.6 250 4-261 169-462 (532)
54 PRK11071 esterase YqiA; Provis 99.9 3.4E-22 7.4E-27 159.0 19.5 184 22-273 2-190 (190)
55 TIGR01836 PHA_synth_III_C poly 99.9 5.9E-22 1.3E-26 172.7 20.5 240 21-272 62-348 (350)
56 PRK05077 frsA fermentation/res 99.9 1.2E-21 2.5E-26 173.6 21.7 211 21-272 194-410 (414)
57 PRK10566 esterase; Provisional 99.9 1.8E-20 3.9E-25 155.7 19.5 225 3-272 4-246 (249)
58 PRK07868 acyl-CoA synthetase; 99.9 3.9E-20 8.5E-25 180.5 22.3 258 4-272 44-359 (994)
59 PRK13604 luxD acyl transferase 99.9 7E-20 1.5E-24 153.3 19.7 199 22-257 38-247 (307)
60 PLN02872 triacylglycerol lipas 99.9 4.6E-20 1E-24 161.7 19.4 250 21-272 74-387 (395)
61 KOG2564 Predicted acetyltransf 99.8 4.7E-20 1E-24 148.4 14.6 101 20-128 73-180 (343)
62 COG2021 MET2 Homoserine acetyl 99.8 9.9E-18 2.1E-22 141.1 22.3 258 11-272 37-366 (368)
63 PF12695 Abhydrolase_5: Alpha/ 99.8 6.9E-19 1.5E-23 133.8 13.6 144 23-254 1-145 (145)
64 COG3208 GrsT Predicted thioest 99.8 1.9E-17 4.1E-22 132.1 19.7 223 21-272 7-234 (244)
65 TIGR03101 hydr2_PEP hydrolase, 99.8 4.2E-18 9.1E-23 141.6 11.7 101 21-129 25-133 (266)
66 PF03096 Ndr: Ndr family; Int 99.8 1.6E-16 3.5E-21 130.7 19.1 244 10-272 9-277 (283)
67 PRK11460 putative hydrolase; P 99.7 1.6E-16 3.4E-21 130.6 18.6 180 19-271 14-209 (232)
68 PLN02442 S-formylglutathione h 99.7 3.1E-16 6.8E-21 132.6 20.1 216 9-273 29-276 (283)
69 PF06342 DUF1057: Alpha/beta h 99.7 7.2E-16 1.6E-20 125.5 20.3 231 21-272 35-297 (297)
70 KOG2931 Differentiation-relate 99.7 2.7E-15 5.8E-20 122.0 21.9 252 10-272 32-304 (326)
71 TIGR02821 fghA_ester_D S-formy 99.7 4.4E-16 9.6E-21 131.3 17.8 109 21-129 42-172 (275)
72 TIGR03230 lipo_lipase lipoprot 99.7 8.6E-17 1.9E-21 141.4 13.3 104 19-130 39-154 (442)
73 KOG4667 Predicted esterase [Li 99.7 6.1E-16 1.3E-20 120.3 14.7 201 21-260 33-245 (269)
74 KOG1552 Predicted alpha/beta h 99.7 6.5E-16 1.4E-20 124.1 12.4 187 21-272 60-250 (258)
75 PF00975 Thioesterase: Thioest 99.7 4.4E-15 9.5E-20 121.7 16.4 220 22-271 1-229 (229)
76 COG0429 Predicted hydrolase of 99.7 1.2E-14 2.6E-19 120.8 17.7 238 21-271 75-337 (345)
77 cd00707 Pancreat_lipase_like P 99.7 5.4E-16 1.2E-20 130.4 10.0 111 12-130 27-147 (275)
78 PLN00021 chlorophyllase 99.7 3.1E-15 6.8E-20 127.6 14.7 101 21-129 52-165 (313)
79 PF00326 Peptidase_S9: Prolyl 99.6 2.3E-15 5E-20 122.2 10.0 197 36-272 2-207 (213)
80 TIGR01840 esterase_phb esteras 99.6 2.9E-14 6.2E-19 115.7 16.4 109 20-130 12-130 (212)
81 TIGR01839 PHA_synth_II poly(R) 99.6 8E-14 1.7E-18 125.0 19.2 242 3-257 195-484 (560)
82 KOG2565 Predicted hydrolases o 99.6 1.8E-14 4E-19 120.5 13.5 98 22-126 153-260 (469)
83 PRK10252 entF enterobactin syn 99.5 2.6E-13 5.6E-18 136.9 18.1 100 21-130 1068-1171(1296)
84 PF05448 AXE1: Acetyl xylan es 99.5 5.9E-13 1.3E-17 113.9 17.1 204 22-259 84-308 (320)
85 PF02230 Abhydrolase_2: Phosph 99.5 7.2E-13 1.6E-17 107.8 15.7 183 19-269 12-214 (216)
86 KOG4391 Predicted alpha/beta h 99.5 1.3E-13 2.8E-18 107.6 9.7 198 19-272 76-280 (300)
87 TIGR03502 lipase_Pla1_cef extr 99.5 8.8E-14 1.9E-18 129.6 10.5 97 21-117 449-577 (792)
88 PF06821 Ser_hydrolase: Serine 99.5 4.6E-13 9.9E-18 104.4 12.4 155 24-259 1-158 (171)
89 COG1506 DAP2 Dipeptidyl aminop 99.5 7.2E-13 1.6E-17 123.5 14.4 208 22-272 395-611 (620)
90 TIGR00976 /NonD putative hydro 99.5 1.8E-12 4E-17 119.5 16.5 102 20-130 21-132 (550)
91 TIGR01849 PHB_depoly_PhaZ poly 99.4 1.3E-11 2.9E-16 107.7 19.1 260 4-272 81-404 (406)
92 COG0400 Predicted esterase [Ge 99.4 1E-11 2.2E-16 99.2 15.4 176 20-271 17-206 (207)
93 KOG1838 Alpha/beta hydrolase [ 99.4 2.3E-11 5E-16 104.8 18.6 229 20-259 124-368 (409)
94 PF05728 UPF0227: Uncharacteri 99.3 1.9E-10 4E-15 90.8 17.8 181 24-272 2-187 (187)
95 PF01738 DLH: Dienelactone hyd 99.3 5.9E-12 1.3E-16 102.5 9.5 164 21-259 14-194 (218)
96 COG3458 Acetyl esterase (deace 99.3 2.8E-11 6.2E-16 97.7 13.0 198 22-255 84-301 (321)
97 PRK10162 acetyl esterase; Prov 99.3 2.2E-10 4.7E-15 98.6 18.3 102 20-129 80-194 (318)
98 PF10230 DUF2305: Uncharacteri 99.3 4.3E-10 9.3E-15 94.1 19.2 106 22-129 3-121 (266)
99 PF06500 DUF1100: Alpha/beta h 99.3 7.9E-11 1.7E-15 102.2 13.8 207 21-268 190-407 (411)
100 PF12146 Hydrolase_4: Putative 99.3 1.4E-11 3E-16 83.2 6.7 73 11-90 3-79 (79)
101 COG3243 PhaC Poly(3-hydroxyalk 99.3 1.2E-10 2.6E-15 100.0 13.6 232 20-260 106-376 (445)
102 PF06028 DUF915: Alpha/beta hy 99.2 7.5E-10 1.6E-14 91.4 16.1 208 21-271 11-252 (255)
103 PF07819 PGAP1: PGAP1-like pro 99.2 9.3E-11 2E-15 95.6 10.5 103 21-130 4-123 (225)
104 COG4757 Predicted alpha/beta h 99.2 2.1E-10 4.6E-15 90.7 11.9 236 24-271 33-280 (281)
105 PF08538 DUF1749: Protein of u 99.2 6.3E-10 1.4E-14 92.9 14.9 232 21-271 33-302 (303)
106 PF03959 FSH1: Serine hydrolas 99.2 2.2E-10 4.8E-15 92.8 11.2 172 21-261 4-208 (212)
107 COG0412 Dienelactone hydrolase 99.1 4.1E-09 8.9E-14 86.6 16.3 167 18-258 23-206 (236)
108 COG3319 Thioesterase domains o 99.1 4.1E-10 8.9E-15 92.7 10.4 100 22-131 1-104 (257)
109 smart00824 PKS_TE Thioesterase 99.1 2E-09 4.4E-14 86.3 14.1 95 26-130 2-102 (212)
110 PRK10115 protease 2; Provision 99.1 5.9E-09 1.3E-13 98.3 15.6 198 21-256 445-655 (686)
111 PLN02733 phosphatidylcholine-s 99.0 4.8E-10 1E-14 99.5 7.7 92 32-129 105-200 (440)
112 PTZ00472 serine carboxypeptida 99.0 3.3E-08 7.2E-13 89.0 19.5 113 10-128 61-214 (462)
113 PF09752 DUF2048: Uncharacteri 99.0 2.3E-08 4.9E-13 84.9 15.9 237 20-272 91-347 (348)
114 COG2945 Predicted hydrolase of 99.0 1.6E-08 3.5E-13 78.1 13.6 168 22-271 29-204 (210)
115 PRK05371 x-prolyl-dipeptidyl a 99.0 4.1E-08 9E-13 93.3 18.1 216 42-272 273-517 (767)
116 PF02129 Peptidase_S15: X-Pro 98.9 3.4E-08 7.4E-13 83.2 14.3 104 21-130 20-136 (272)
117 PF01674 Lipase_2: Lipase (cla 98.9 2.3E-09 5.1E-14 86.4 6.2 86 22-116 2-96 (219)
118 PF12740 Chlorophyllase2: Chlo 98.9 5E-09 1.1E-13 85.9 8.1 102 21-130 17-131 (259)
119 COG3545 Predicted esterase of 98.9 3.7E-08 8E-13 75.1 12.0 154 22-256 3-158 (181)
120 PF07859 Abhydrolase_3: alpha/ 98.8 7.6E-08 1.7E-12 77.7 12.2 95 24-129 1-109 (211)
121 PF00151 Lipase: Lipase; Inte 98.8 1.5E-08 3.2E-13 87.2 7.7 104 19-130 69-187 (331)
122 KOG2624 Triglyceride lipase-ch 98.8 5.6E-07 1.2E-11 78.9 17.3 128 2-130 53-199 (403)
123 PF05057 DUF676: Putative seri 98.8 1.3E-08 2.9E-13 82.6 6.6 83 22-113 5-96 (217)
124 PF08840 BAAT_C: BAAT / Acyl-C 98.8 1.3E-08 2.9E-13 82.4 6.4 50 81-131 5-57 (213)
125 COG3571 Predicted hydrolase of 98.8 5.7E-07 1.2E-11 67.5 14.3 169 18-255 11-182 (213)
126 PRK04940 hypothetical protein; 98.8 1.4E-06 3E-11 67.7 16.8 83 24-129 2-91 (180)
127 PF02273 Acyl_transf_2: Acyl t 98.7 2E-06 4.3E-11 69.1 17.2 204 21-261 30-243 (294)
128 PF07224 Chlorophyllase: Chlor 98.7 2.7E-08 5.9E-13 80.4 6.6 101 22-130 47-157 (307)
129 PF10503 Esterase_phd: Esteras 98.7 2.4E-07 5.1E-12 75.0 11.5 110 21-130 16-132 (220)
130 KOG3975 Uncharacterized conser 98.6 5.6E-06 1.2E-10 66.6 17.1 247 18-271 26-300 (301)
131 COG4188 Predicted dienelactone 98.6 8.8E-08 1.9E-12 81.6 7.0 217 21-263 71-303 (365)
132 KOG4627 Kynurenine formamidase 98.6 5E-07 1.1E-11 70.6 9.7 184 14-260 58-253 (270)
133 COG1075 LipA Predicted acetylt 98.6 1.9E-07 4.1E-12 80.8 8.0 98 22-129 60-163 (336)
134 PF04301 DUF452: Protein of un 98.6 1.3E-06 2.7E-11 69.9 11.9 100 20-153 10-110 (213)
135 KOG2112 Lysophospholipase [Lip 98.6 7.7E-07 1.7E-11 69.9 10.3 180 22-268 4-202 (206)
136 KOG2551 Phospholipase/carboxyh 98.6 3E-06 6.5E-11 67.1 13.4 186 21-271 5-217 (230)
137 PF05990 DUF900: Alpha/beta hy 98.5 4.4E-07 9.5E-12 74.5 9.0 103 19-128 16-135 (233)
138 PF12715 Abhydrolase_7: Abhydr 98.5 3.5E-07 7.6E-12 78.6 8.3 106 22-128 116-258 (390)
139 COG0657 Aes Esterase/lipase [L 98.5 5.2E-06 1.1E-10 71.3 15.1 98 21-129 79-190 (312)
140 KOG1515 Arylacetamide deacetyl 98.4 1.9E-05 4.1E-10 67.9 15.2 98 21-129 90-206 (336)
141 PF03403 PAF-AH_p_II: Platelet 98.4 4.3E-07 9.2E-12 79.8 4.9 108 21-129 100-261 (379)
142 COG4814 Uncharacterized protei 98.4 2.5E-06 5.4E-11 68.8 8.6 106 23-129 47-175 (288)
143 PF05677 DUF818: Chlamydia CHL 98.3 6.9E-05 1.5E-09 63.5 16.6 86 20-116 136-236 (365)
144 PF11339 DUF3141: Protein of u 98.3 3.9E-05 8.5E-10 68.2 15.6 89 28-129 80-174 (581)
145 PRK10439 enterobactin/ferric e 98.3 5.4E-06 1.2E-10 73.7 10.3 52 78-129 266-322 (411)
146 PF00756 Esterase: Putative es 98.3 1.3E-06 2.7E-11 72.5 5.6 110 20-129 23-149 (251)
147 KOG1553 Predicted alpha/beta h 98.2 6E-06 1.3E-10 69.5 8.2 98 18-127 240-342 (517)
148 PF05577 Peptidase_S28: Serine 98.2 1.5E-05 3.2E-10 71.8 10.7 122 7-129 13-147 (434)
149 KOG2100 Dipeptidyl aminopeptid 98.2 3.2E-05 6.9E-10 73.8 13.2 201 21-271 526-744 (755)
150 COG3509 LpqC Poly(3-hydroxybut 98.1 4.4E-05 9.6E-10 63.3 11.2 117 12-130 47-179 (312)
151 PF10142 PhoPQ_related: PhoPQ- 98.1 3.4E-05 7.4E-10 66.9 11.1 154 85-271 159-317 (367)
152 PF03583 LIP: Secretory lipase 98.1 3.6E-05 7.9E-10 65.3 10.4 45 212-256 218-266 (290)
153 KOG3043 Predicted hydrolase re 98.1 4.3E-05 9.3E-10 60.8 9.7 53 210-262 161-222 (242)
154 KOG3724 Negative regulator of 98.0 3E-05 6.5E-10 71.7 9.3 96 21-129 89-219 (973)
155 PF05705 DUF829: Eukaryotic pr 97.9 0.0025 5.4E-08 52.6 18.6 62 210-271 175-240 (240)
156 COG3150 Predicted esterase [Ge 97.9 0.0001 2.2E-09 56.0 8.4 84 24-125 2-87 (191)
157 PF08386 Abhydrolase_4: TAP-li 97.8 8E-05 1.7E-09 53.0 6.5 60 212-272 33-92 (103)
158 cd00312 Esterase_lipase Estera 97.8 0.0001 2.3E-09 67.4 8.6 104 20-130 94-213 (493)
159 PF02450 LCAT: Lecithin:choles 97.8 9.2E-05 2E-09 65.6 7.7 78 36-129 66-159 (389)
160 COG1073 Hydrolases of the alph 97.7 0.00046 9.9E-09 58.0 11.5 68 204-271 222-294 (299)
161 COG0627 Predicted esterase [Ge 97.7 0.00017 3.6E-09 61.7 8.0 109 20-129 53-186 (316)
162 KOG2281 Dipeptidyl aminopeptid 97.7 0.00012 2.6E-09 66.5 7.0 109 18-127 639-759 (867)
163 cd00741 Lipase Lipase. Lipase 97.7 9.2E-05 2E-09 56.6 5.6 52 78-129 7-66 (153)
164 COG4782 Uncharacterized protei 97.7 0.00027 5.8E-09 60.4 8.6 90 19-113 114-209 (377)
165 PF06057 VirJ: Bacterial virul 97.6 0.0003 6.6E-09 55.0 7.8 95 23-130 4-107 (192)
166 COG4099 Predicted peptidase [G 97.6 0.00038 8.2E-09 57.8 8.4 49 80-128 251-302 (387)
167 COG2936 Predicted acyl esteras 97.6 0.0021 4.6E-08 58.6 13.6 120 3-129 19-158 (563)
168 PF01764 Lipase_3: Lipase (cla 97.6 0.00019 4E-09 53.9 6.0 40 78-117 47-86 (140)
169 PF12048 DUF3530: Protein of u 97.6 0.0013 2.8E-08 56.4 11.7 108 21-128 87-227 (310)
170 KOG3253 Predicted alpha/beta h 97.6 0.0013 2.8E-08 59.6 11.9 50 210-259 301-350 (784)
171 PLN02606 palmitoyl-protein thi 97.6 0.0008 1.7E-08 56.6 9.9 98 21-129 26-131 (306)
172 KOG2541 Palmitoyl protein thio 97.4 0.0014 3E-08 53.7 9.5 97 22-129 24-127 (296)
173 KOG1551 Uncharacterized conser 97.4 0.0029 6.3E-08 51.8 11.2 54 216-271 309-363 (371)
174 KOG3101 Esterase D [General fu 97.4 0.00027 5.8E-09 55.8 4.7 108 20-128 43-174 (283)
175 PLN02633 palmitoyl protein thi 97.4 0.0014 3E-08 55.3 8.9 98 21-129 25-130 (314)
176 PF02089 Palm_thioest: Palmito 97.3 0.00068 1.5E-08 56.5 6.7 102 21-129 5-115 (279)
177 KOG4840 Predicted hydrolases o 97.3 0.0049 1.1E-07 49.2 11.0 97 22-129 37-143 (299)
178 KOG3847 Phospholipase A2 (plat 97.3 0.00036 7.7E-09 58.3 4.4 40 21-60 118-158 (399)
179 PF11144 DUF2920: Protein of u 97.2 0.0027 5.9E-08 55.4 8.9 33 96-128 185-217 (403)
180 cd00519 Lipase_3 Lipase (class 97.1 0.0013 2.8E-08 53.9 5.8 29 88-116 121-149 (229)
181 PF11187 DUF2974: Protein of u 97.1 0.0016 3.5E-08 53.0 6.2 44 85-129 75-122 (224)
182 PLN02517 phosphatidylcholine-s 97.0 0.0013 2.9E-08 60.0 6.1 87 35-129 156-262 (642)
183 KOG2183 Prolylcarboxypeptidase 97.0 0.0031 6.7E-08 54.8 7.6 110 18-129 77-201 (492)
184 COG2819 Predicted hydrolase of 97.0 0.0015 3.3E-08 53.8 5.3 48 83-130 122-172 (264)
185 COG2382 Fes Enterochelin ester 96.9 0.0014 3E-08 54.8 4.3 104 21-130 98-212 (299)
186 PLN02162 triacylglycerol lipas 96.8 0.0037 8E-08 55.6 6.4 37 78-114 261-297 (475)
187 PLN00413 triacylglycerol lipas 96.7 0.0043 9.3E-08 55.3 6.5 37 78-114 267-303 (479)
188 KOG3967 Uncharacterized conser 96.7 0.018 3.9E-07 45.8 9.0 102 21-129 101-226 (297)
189 PF00450 Peptidase_S10: Serine 96.6 0.027 5.9E-07 50.2 11.3 115 10-129 24-180 (415)
190 KOG2369 Lecithin:cholesterol a 96.6 0.0036 7.8E-08 55.4 5.0 81 35-128 124-223 (473)
191 PF04083 Abhydro_lipase: Parti 96.6 0.0022 4.7E-08 41.0 2.6 37 2-38 17-60 (63)
192 COG2272 PnbA Carboxylesterase 96.5 0.0066 1.4E-07 54.2 6.4 108 20-130 93-217 (491)
193 PLN02571 triacylglycerol lipas 96.5 0.0045 9.8E-08 54.5 5.0 37 79-115 208-246 (413)
194 PLN02454 triacylglycerol lipas 96.5 0.0051 1.1E-07 54.1 5.3 35 81-115 212-248 (414)
195 COG4287 PqaA PhoPQ-activated p 96.5 0.0082 1.8E-07 51.5 6.2 61 209-272 325-385 (507)
196 KOG4372 Predicted alpha/beta h 96.4 0.0032 7E-08 54.7 3.6 87 22-113 81-168 (405)
197 KOG2182 Hydrolytic enzymes of 96.3 0.034 7.3E-07 49.7 9.6 109 19-128 84-205 (514)
198 PF00135 COesterase: Carboxyle 96.3 0.017 3.8E-07 53.2 8.3 104 21-130 125-245 (535)
199 PF06259 Abhydrolase_8: Alpha/ 96.3 0.016 3.4E-07 45.3 6.5 52 78-129 87-143 (177)
200 PLN02408 phospholipase A1 96.2 0.009 2E-07 51.9 5.0 36 81-116 184-221 (365)
201 PLN02934 triacylglycerol lipas 96.1 0.01 2.2E-07 53.5 5.0 37 78-114 304-340 (515)
202 COG2830 Uncharacterized protei 96.0 0.06 1.3E-06 40.9 8.0 79 20-129 10-89 (214)
203 PF10340 DUF2424: Protein of u 95.8 0.052 1.1E-06 47.4 8.1 101 21-129 122-234 (374)
204 PLN02324 triacylglycerol lipas 95.8 0.016 3.6E-07 51.0 5.0 36 80-115 198-235 (415)
205 PLN02802 triacylglycerol lipas 95.7 0.018 3.9E-07 51.9 4.9 36 80-115 313-350 (509)
206 PLN02310 triacylglycerol lipas 95.7 0.028 6.1E-07 49.5 6.0 37 79-115 189-229 (405)
207 PLN02753 triacylglycerol lipas 95.6 0.02 4.2E-07 51.8 4.9 37 79-115 291-332 (531)
208 PLN02719 triacylglycerol lipas 95.4 0.026 5.6E-07 50.9 4.8 36 80-115 278-318 (518)
209 PF01083 Cutinase: Cutinase; 95.3 0.05 1.1E-06 42.7 5.8 53 78-130 64-122 (179)
210 PLN03037 lipase class 3 family 95.2 0.031 6.8E-07 50.5 4.8 36 80-115 299-338 (525)
211 PLN02761 lipase class 3 family 95.2 0.032 6.9E-07 50.5 4.9 35 80-114 273-313 (527)
212 PF07082 DUF1350: Protein of u 95.0 0.49 1.1E-05 38.9 10.9 89 23-128 19-123 (250)
213 PLN02213 sinapoylglucose-malat 94.9 0.09 1.9E-06 45.4 6.9 59 213-272 233-315 (319)
214 PF05277 DUF726: Protein of un 94.9 0.047 1E-06 47.3 4.8 37 93-129 218-259 (345)
215 PF00450 Peptidase_S10: Serine 94.8 0.047 1E-06 48.7 4.9 60 213-272 330-414 (415)
216 PF05576 Peptidase_S37: PS-10 94.5 0.058 1.3E-06 47.3 4.5 116 7-129 49-168 (448)
217 PLN02847 triacylglycerol lipas 94.5 0.066 1.4E-06 49.2 5.0 29 87-115 243-271 (633)
218 PF06441 EHN: Epoxide hydrolas 94.3 0.037 8E-07 39.8 2.5 22 20-41 91-112 (112)
219 KOG4569 Predicted lipase [Lipi 93.7 0.11 2.4E-06 45.2 4.7 36 79-114 155-190 (336)
220 COG3946 VirJ Type IV secretory 93.6 0.37 8.1E-06 42.2 7.6 73 24-109 263-340 (456)
221 KOG1202 Animal-type fatty acid 93.5 0.43 9.4E-06 47.5 8.6 98 19-132 2121-2221(2376)
222 PF11288 DUF3089: Protein of u 93.3 0.23 4.9E-06 39.8 5.5 39 78-116 77-116 (207)
223 PLN03016 sinapoylglucose-malat 93.3 0.33 7.2E-06 43.7 7.2 59 213-272 347-429 (433)
224 PLN03016 sinapoylglucose-malat 93.2 0.38 8.3E-06 43.3 7.5 106 21-128 66-208 (433)
225 PLN02209 serine carboxypeptida 93.1 0.35 7.6E-06 43.6 7.1 59 213-272 351-433 (437)
226 COG1770 PtrB Protease II [Amin 92.2 6.2 0.00013 37.1 13.8 105 22-126 449-558 (682)
227 KOG1282 Serine carboxypeptidas 92.1 0.23 4.9E-06 44.7 4.5 60 213-272 363-446 (454)
228 COG2939 Carboxypeptidase C (ca 92.0 1.1 2.3E-05 40.6 8.5 102 21-128 101-234 (498)
229 COG4947 Uncharacterized protei 90.9 0.71 1.5E-05 35.7 5.4 110 12-129 17-135 (227)
230 PLN02209 serine carboxypeptida 90.9 0.94 2E-05 40.9 7.2 102 21-128 68-210 (437)
231 KOG2237 Predicted serine prote 90.7 0.57 1.2E-05 43.4 5.6 102 25-126 472-580 (712)
232 KOG2029 Uncharacterized conser 90.6 0.44 9.5E-06 43.8 4.8 38 77-114 505-545 (697)
233 KOG1516 Carboxylesterase and r 89.9 1.7 3.7E-05 40.4 8.3 103 21-129 112-231 (545)
234 COG1505 Serine proteases of th 87.4 6.7 0.00015 36.5 9.9 103 21-125 421-530 (648)
235 KOG4540 Putative lipase essent 87.2 0.97 2.1E-05 37.9 4.2 29 89-117 270-298 (425)
236 COG5153 CVT17 Putative lipase 87.2 0.97 2.1E-05 37.9 4.2 29 89-117 270-298 (425)
237 PLN02213 sinapoylglucose-malat 86.8 2.7 5.8E-05 36.3 7.0 75 48-128 2-94 (319)
238 PRK12467 peptide synthase; Pro 84.3 4.4 9.4E-05 46.9 8.8 100 20-129 3691-3794(3956)
239 PF00698 Acyl_transf_1: Acyl t 83.2 0.99 2.2E-05 38.8 2.7 29 85-113 74-102 (318)
240 smart00827 PKS_AT Acyl transfe 83.1 1.6 3.4E-05 37.1 3.9 30 85-114 72-101 (298)
241 TIGR03131 malonate_mdcH malona 79.5 2.6 5.5E-05 35.8 3.9 29 85-113 66-94 (295)
242 KOG2385 Uncharacterized conser 78.6 5.4 0.00012 36.4 5.6 38 92-129 444-486 (633)
243 TIGR00128 fabD malonyl CoA-acy 78.4 2.9 6.2E-05 35.3 3.9 30 85-114 72-102 (290)
244 PF07519 Tannase: Tannase and 76.9 4.8 0.0001 36.8 5.1 89 40-129 52-149 (474)
245 cd07225 Pat_PNPLA6_PNPLA7 Pata 74.2 5.3 0.00011 34.3 4.4 32 85-116 33-64 (306)
246 PRK10279 hypothetical protein; 72.9 5.5 0.00012 34.0 4.2 34 85-118 23-56 (300)
247 cd07207 Pat_ExoU_VipD_like Exo 72.7 6.3 0.00014 31.0 4.3 32 85-116 17-48 (194)
248 cd01714 ETF_beta The electron 71.7 13 0.00028 29.7 5.8 48 78-126 93-145 (202)
249 COG1752 RssA Predicted esteras 71.3 6 0.00013 33.9 4.1 33 85-117 29-61 (306)
250 cd07198 Patatin Patatin-like p 71.0 6.8 0.00015 30.3 4.0 33 85-117 16-48 (172)
251 cd07210 Pat_hypo_W_succinogene 70.3 8 0.00017 31.4 4.4 32 85-116 18-49 (221)
252 TIGR02816 pfaB_fam PfaB family 70.1 5.6 0.00012 36.9 3.8 30 85-114 254-284 (538)
253 PF08237 PE-PPE: PE-PPE domain 70.0 13 0.00028 30.3 5.6 39 77-115 28-68 (225)
254 cd07227 Pat_Fungal_NTE1 Fungal 70.0 7.7 0.00017 32.6 4.3 31 85-115 28-58 (269)
255 COG2939 Carboxypeptidase C (ca 69.5 5.2 0.00011 36.4 3.3 59 213-272 425-489 (498)
256 COG1448 TyrB Aspartate/tyrosin 69.2 29 0.00063 30.6 7.6 85 22-128 172-263 (396)
257 KOG2521 Uncharacterized conser 68.6 82 0.0018 27.6 14.1 83 22-111 39-125 (350)
258 PF09949 DUF2183: Uncharacteri 64.1 19 0.0004 25.3 4.6 84 35-125 11-97 (100)
259 cd07209 Pat_hypo_Ecoli_Z1214_l 63.9 12 0.00027 30.1 4.3 33 85-117 16-48 (215)
260 cd07230 Pat_TGL4-5_like Triacy 63.8 5.8 0.00013 35.7 2.5 39 84-122 90-128 (421)
261 cd07228 Pat_NTE_like_bacteria 62.9 13 0.00027 28.9 4.1 33 85-117 18-50 (175)
262 PF06850 PHB_depo_C: PHB de-po 61.9 19 0.00041 28.6 4.7 62 210-271 130-199 (202)
263 COG4553 DepA Poly-beta-hydroxy 60.1 1.1E+02 0.0024 26.2 9.9 99 22-129 104-208 (415)
264 cd07205 Pat_PNPLA6_PNPLA7_NTE1 58.5 19 0.00041 27.8 4.4 32 85-116 18-49 (175)
265 cd07229 Pat_TGL3_like Triacylg 58.3 8.7 0.00019 34.1 2.6 40 85-124 101-140 (391)
266 PF00862 Sucrose_synth: Sucros 58.1 19 0.00041 33.0 4.7 44 70-115 377-422 (550)
267 TIGR03712 acc_sec_asp2 accesso 55.3 13 0.00028 33.8 3.2 38 79-116 339-378 (511)
268 cd07232 Pat_PLPL Patain-like p 55.0 10 0.00023 33.9 2.6 40 85-124 85-124 (407)
269 COG3887 Predicted signaling pr 55.0 23 0.0005 33.1 4.7 48 78-128 323-376 (655)
270 PF06309 Torsin: Torsin; Inte 54.6 14 0.00029 27.2 2.7 26 19-44 50-77 (127)
271 COG4822 CbiK Cobalamin biosynt 54.4 65 0.0014 26.1 6.6 58 22-100 139-199 (265)
272 cd07212 Pat_PNPLA9 Patatin-lik 53.8 25 0.00055 30.2 4.7 19 98-116 35-53 (312)
273 cd07231 Pat_SDP1-like Sugar-De 53.1 12 0.00026 32.2 2.5 36 85-120 86-121 (323)
274 cd07208 Pat_hypo_Ecoli_yjju_li 52.6 32 0.0007 28.6 5.1 36 84-119 15-51 (266)
275 PF10503 Esterase_phd: Esteras 50.1 17 0.00038 29.5 3.0 28 213-240 169-196 (220)
276 KOG1282 Serine carboxypeptidas 50.0 1.1E+02 0.0025 27.8 8.3 115 10-129 57-212 (454)
277 COG0218 Predicted GTPase [Gene 46.7 32 0.0007 27.4 3.9 13 50-62 72-84 (200)
278 PF14253 AbiH: Bacteriophage a 46.2 20 0.00043 29.8 2.9 15 93-107 233-247 (270)
279 COG1576 Uncharacterized conser 44.8 71 0.0015 24.3 5.3 50 39-106 59-109 (155)
280 COG0331 FabD (acyl-carrier-pro 44.3 31 0.00068 29.6 3.8 22 93-114 83-104 (310)
281 cd07224 Pat_like Patatin-like 43.1 44 0.00095 27.3 4.4 35 84-118 16-52 (233)
282 cd07206 Pat_TGL3-4-5_SDP1 Tria 42.6 38 0.00083 28.9 4.0 35 85-119 87-121 (298)
283 PF03610 EIIA-man: PTS system 41.9 1.2E+02 0.0027 21.4 8.2 73 23-114 2-76 (116)
284 COG3621 Patatin [General funct 40.8 49 0.0011 28.7 4.2 38 81-118 23-65 (394)
285 cd07222 Pat_PNPLA4 Patatin-lik 40.7 30 0.00065 28.6 3.1 36 85-121 17-56 (246)
286 PF06057 VirJ: Bacterial virul 39.8 36 0.00077 27.0 3.1 56 207-270 132-188 (192)
287 PF07519 Tannase: Tannase and 38.1 67 0.0015 29.5 5.1 59 213-271 353-424 (474)
288 PLN02752 [acyl-carrier protein 37.7 34 0.00074 29.7 3.1 28 87-114 110-143 (343)
289 KOG1387 Glycosyltransferase [C 37.5 12 0.00026 32.6 0.2 33 92-128 124-157 (465)
290 PF02590 SPOUT_MTase: Predicte 36.8 70 0.0015 24.4 4.3 51 38-105 58-109 (155)
291 TIGR03607 patatin-related prot 36.5 45 0.00098 32.4 3.9 30 85-114 53-85 (739)
292 TIGR02883 spore_cwlD N-acetylm 36.2 73 0.0016 25.0 4.5 44 49-94 1-44 (189)
293 KOG1283 Serine carboxypeptidas 35.8 1.6E+02 0.0035 25.6 6.5 89 21-115 31-142 (414)
294 COG3933 Transcriptional antite 35.8 2.3E+02 0.0049 25.8 7.7 75 22-114 110-184 (470)
295 cd07218 Pat_iPLA2 Calcium-inde 35.7 63 0.0014 26.7 4.2 21 97-117 32-52 (245)
296 TIGR02813 omega_3_PfaA polyket 35.2 38 0.00082 37.9 3.5 29 85-113 664-692 (2582)
297 cd07204 Pat_PNPLA_like Patatin 35.1 67 0.0015 26.4 4.3 35 85-119 17-56 (243)
298 PRK11613 folP dihydropteroate 35.1 2.1E+02 0.0047 24.2 7.3 16 94-109 210-225 (282)
299 PRK02399 hypothetical protein; 34.2 3.4E+02 0.0075 24.4 8.6 103 25-127 6-129 (406)
300 cd07211 Pat_PNPLA8 Patatin-lik 33.9 47 0.001 28.4 3.3 17 98-114 44-60 (308)
301 PRK06029 3-octaprenyl-4-hydrox 32.7 1.7E+02 0.0036 23.1 5.9 61 22-96 116-178 (185)
302 cd01819 Patatin_and_cPLA2 Pata 32.6 82 0.0018 23.8 4.1 29 85-113 16-46 (155)
303 PF02633 Creatininase: Creatin 32.6 1.7E+02 0.0037 23.8 6.3 68 38-108 43-113 (237)
304 PF05577 Peptidase_S28: Serine 32.5 43 0.00093 30.1 3.0 40 214-257 377-416 (434)
305 PF00448 SRP54: SRP54-type pro 32.3 2.5E+02 0.0055 22.2 7.1 71 40-126 75-148 (196)
306 COG4814 Uncharacterized protei 31.9 1.6E+02 0.0036 24.6 5.8 58 213-271 216-284 (288)
307 PF12740 Chlorophyllase2: Chlo 31.4 1.6E+02 0.0034 24.7 5.8 50 211-260 152-211 (259)
308 cd07217 Pat17_PNPLA8_PNPLA9_li 30.4 45 0.00098 29.1 2.6 18 98-115 44-61 (344)
309 PF09994 DUF2235: Uncharacteri 30.2 3.3E+02 0.0072 22.9 8.1 38 78-115 73-112 (277)
310 cd07221 Pat_PNPLA3 Patatin-lik 30.0 91 0.002 25.9 4.3 21 97-117 34-54 (252)
311 cd06143 PAN2_exo DEDDh 3'-5' e 29.0 50 0.0011 25.7 2.4 14 95-108 101-114 (174)
312 cd07220 Pat_PNPLA2 Patatin-lik 28.8 95 0.0021 25.7 4.2 21 97-117 38-58 (249)
313 PF00326 Peptidase_S9: Prolyl 28.7 90 0.002 24.6 4.0 60 20-91 143-208 (213)
314 TIGR00421 ubiX_pad polyprenyl 28.2 2.3E+02 0.0051 22.1 6.1 61 22-96 113-175 (181)
315 PF15566 Imm18: Immunity prote 27.9 81 0.0018 19.2 2.6 30 78-107 4-33 (52)
316 PRK06731 flhF flagellar biosyn 27.2 3.8E+02 0.0082 22.5 8.2 75 35-125 140-218 (270)
317 COG4819 EutA Ethanolamine util 27.1 3.1E+02 0.0066 24.1 6.8 64 45-120 369-434 (473)
318 COG5019 CDC3 Septin family pro 27.1 30 0.00066 30.3 1.0 24 23-46 85-111 (373)
319 PF05576 Peptidase_S37: PS-10 26.8 1.3E+02 0.0029 27.0 4.8 57 210-271 348-411 (448)
320 PRK10319 N-acetylmuramoyl-l-al 26.8 1.3E+02 0.0028 25.6 4.7 46 47-94 55-100 (287)
321 PF00091 Tubulin: Tubulin/FtsZ 25.7 85 0.0019 25.2 3.3 31 81-111 110-140 (216)
322 TIGR00521 coaBC_dfp phosphopan 25.5 4.7E+02 0.01 23.4 8.1 96 22-128 113-233 (390)
323 PRK03031 rnpA ribonuclease P; 25.4 1.9E+02 0.0042 20.8 4.9 20 77-96 100-119 (122)
324 PF10081 Abhydrolase_9: Alpha/ 24.8 1.2E+02 0.0026 25.8 4.0 50 80-129 91-146 (289)
325 PRK00103 rRNA large subunit me 24.8 2.2E+02 0.0048 21.7 5.2 49 40-105 60-109 (157)
326 PF12083 DUF3560: Domain of un 24.8 68 0.0015 23.6 2.3 22 82-103 29-50 (126)
327 COG3340 PepE Peptidase E [Amin 24.6 2.4E+02 0.0052 22.9 5.5 35 21-55 32-70 (224)
328 PF01734 Patatin: Patatin-like 24.2 98 0.0021 23.4 3.4 21 95-115 27-47 (204)
329 cd07213 Pat17_PNPLA8_PNPLA9_li 23.9 1.5E+02 0.0032 25.0 4.6 19 98-116 37-55 (288)
330 PRK14194 bifunctional 5,10-met 23.9 1.3E+02 0.0028 25.9 4.1 34 82-115 143-182 (301)
331 PF08197 TT_ORF2a: pORF2a trun 23.8 48 0.001 19.2 1.1 14 48-61 35-48 (49)
332 PRK13512 coenzyme A disulfide 23.6 1.5E+02 0.0033 26.7 4.9 47 82-131 136-182 (438)
333 PF05707 Zot: Zonular occluden 23.3 90 0.0019 24.5 3.0 34 24-58 2-39 (193)
334 PF03283 PAE: Pectinacetyleste 23.3 2.2E+02 0.0047 25.2 5.6 34 95-128 156-193 (361)
335 PRK11789 N-acetyl-anhydromuran 23.2 1E+02 0.0022 24.4 3.1 27 78-104 132-158 (185)
336 cd00006 PTS_IIA_man PTS_IIA, P 22.7 2.9E+02 0.0063 19.7 7.6 70 23-111 3-74 (122)
337 cd01088 MetAP2 Methionine Amin 21.9 63 0.0014 27.4 1.9 29 78-106 126-155 (291)
338 PF03205 MobB: Molybdopterin g 21.7 1.2E+02 0.0025 22.6 3.1 39 23-61 1-42 (140)
339 PRK14974 cell division protein 21.6 4.8E+02 0.01 22.8 7.3 64 46-125 221-286 (336)
340 KOG1283 Serine carboxypeptidas 21.6 71 0.0015 27.7 2.1 29 243-271 383-411 (414)
341 PF02882 THF_DHG_CYH_C: Tetrah 21.5 1.8E+02 0.0039 22.3 4.2 38 78-115 16-59 (160)
342 KOG2872 Uroporphyrinogen decar 21.2 4.1E+02 0.0089 22.8 6.4 70 22-102 253-335 (359)
343 PF02126 PTE: Phosphotriestera 21.2 1.7E+02 0.0036 25.2 4.4 77 22-106 184-260 (308)
344 PRK07281 methionine aminopepti 21.2 1E+02 0.0023 26.1 3.1 28 78-105 174-202 (286)
345 PRK10431 N-acetylmuramoyl-l-al 21.0 2.3E+02 0.0049 25.9 5.3 43 49-93 192-234 (445)
346 KOG1752 Glutaredoxin and relat 20.6 2.9E+02 0.0063 19.5 4.8 76 21-115 14-89 (104)
347 PRK07877 hypothetical protein; 20.6 1.9E+02 0.0041 28.3 5.0 36 90-128 103-139 (722)
348 PRK08671 methionine aminopepti 20.4 76 0.0017 26.9 2.1 29 78-106 127-156 (291)
349 PHA02114 hypothetical protein 20.3 1.1E+02 0.0024 21.3 2.4 32 23-54 84-116 (127)
No 1
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=4.1e-39 Score=274.18 Aligned_cols=257 Identities=21% Similarity=0.267 Sum_probs=170.5
Q ss_pred ccceEEecCCCceEEEecCCCCChhchhhhhhhhhcCceEEEEecCCCccccCCCCCCCCCC-cccccHHHHHHHHHHHH
Q 024033 11 AMNAKIIGSGKETLVLAHGFGGDQSIWDKITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNP-VKYSSYEAFADDLITLL 89 (273)
Q Consensus 11 ~~~~~~~G~~~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~-~~~~s~~~~a~~l~~~~ 89 (273)
.++|+..|+++++|||+||+++++..|+.+++.|+++|+|+++|+||||.|+.+.... .+. ..| +++++++++.+++
T Consensus 19 ~i~y~~~G~~~~~vlllHG~~~~~~~w~~~~~~L~~~~~vi~~DlpG~G~S~~~~~~~-~~~~~~~-~~~~~a~~l~~~l 96 (294)
T PLN02824 19 NIRYQRAGTSGPALVLVHGFGGNADHWRKNTPVLAKSHRVYAIDLLGYGYSDKPNPRS-APPNSFY-TFETWGEQLNDFC 96 (294)
T ss_pred EEEEEEcCCCCCeEEEECCCCCChhHHHHHHHHHHhCCeEEEEcCCCCCCCCCCcccc-ccccccC-CHHHHHHHHHHHH
Confidence 4567777854479999999999999999999999999999999999999996543110 011 124 4999999999999
Q ss_pred HHcCCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHH--hHHHHhc----
Q 024033 90 EENDLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVET--NYASWAS---- 163 (273)
Q Consensus 90 ~~~~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---- 163 (273)
+++++++++|+||||||++++.+|+++|++|+++|++++.+......... .........+...+.. ....+..
T Consensus 97 ~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (294)
T PLN02824 97 SDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQP-WLGRPFIKAFQNLLRETAVGKAFFKSVAT 175 (294)
T ss_pred HHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccc-hhhhHHHHHHHHHHhchhHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999764322111110 1111111111111100 0000000
Q ss_pred -----cccccccCCCChhhHHHHHHHHHh--cChhhHHHHHHHhc---ccccccccCCCCCCEEEEecCCCCccchhHHH
Q 024033 164 -----SFPRLVVDTKDAPSVEKFENCLKR--MRHEFALPLAKTVF---YSDEREILDKVETPCTIFQPSNDAVVPNSVAY 233 (273)
Q Consensus 164 -----~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~---~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~ 233 (273)
.+........ .....+..+.+.. ..+.....+..... .......+++|++|+++|+|++|.++|.+..+
T Consensus 176 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~ 254 (294)
T PLN02824 176 PETVKNILCQCYHDD-SAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEKDPWEPVELGR 254 (294)
T ss_pred HHHHHHHHHHhccCh-hhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEecCCCCCChHHHH
Confidence 0000000000 0000111111111 11111111111111 11223567899999999999999999998888
Q ss_pred HHHHHcCCCeEEEEcCCCCCCCCccChHHHHHHHHHhhc
Q 024033 234 YMQEKMKGKSTVEIIEADGHFPQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 234 ~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 272 (273)
.+++..++ +++++++++||++++|+|++|++.|.+|++
T Consensus 255 ~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (294)
T PLN02824 255 AYANFDAV-EDFIVLPGVGHCPQDEAPELVNPLIESFVA 292 (294)
T ss_pred HHHhcCCc-cceEEeCCCCCChhhhCHHHHHHHHHHHHh
Confidence 88887764 589999999999999999999999999985
No 2
>PRK10349 carboxylesterase BioH; Provisional
Probab=100.00 E-value=6e-39 Score=267.83 Aligned_cols=245 Identities=19% Similarity=0.311 Sum_probs=166.7
Q ss_pred cceEEecCCCceEEEecCCCCChhchhhhhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHH
Q 024033 12 MNAKIIGSGKETLVLAHGFGGDQSIWDKITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEE 91 (273)
Q Consensus 12 ~~~~~~G~~~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~ 91 (273)
++|..+|+|.++||||||+++++..|+++.+.|+++|+|+++|+||||.|+.+. .+ +++++++++.+
T Consensus 4 ~~y~~~G~g~~~ivllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~--------~~-~~~~~~~~l~~---- 70 (256)
T PRK10349 4 IWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFG--------AL-SLADMAEAVLQ---- 70 (256)
T ss_pred cchhhcCCCCCeEEEECCCCCChhHHHHHHHHHhcCCEEEEecCCCCCCCCCCC--------CC-CHHHHHHHHHh----
Confidence 678888988667999999999999999999999999999999999999995332 24 48888877664
Q ss_pred cCCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHHhcccccc-cc
Q 024033 92 NDLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASWASSFPRL-VV 170 (273)
Q Consensus 92 ~~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 170 (273)
+++++++||||||||.+++.+|.++|++|+++|++++++.......+. .........+...+...+......+... ..
T Consensus 71 ~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (256)
T PRK10349 71 QAPDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWP-GIKPDVLAGFQQQLSDDFQRTVERFLALQTM 149 (256)
T ss_pred cCCCCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCC-cccHHHHHHHHHHHHhchHHHHHHHHHHHHc
Confidence 567899999999999999999999999999999999876532222111 1111111111111111111111111000 01
Q ss_pred CCC-ChhhHHHHHHHHHhcC-hhh--HHHHHHHhcccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCCCeEEE
Q 024033 171 DTK-DAPSVEKFENCLKRMR-HEF--ALPLAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKGKSTVE 246 (273)
Q Consensus 171 ~~~-~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~ 246 (273)
+.. .......+........ +.. ...........+..+.++++++|+++++|++|.++|....+.+++.+++ ++++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~-~~~~ 228 (256)
T PRK10349 150 GTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPH-SESY 228 (256)
T ss_pred cCchHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCCC-CeEE
Confidence 111 0111111111111111 111 0111112223456677899999999999999999999999999999986 5899
Q ss_pred EcCCCCCCCCccChHHHHHHHHHhh
Q 024033 247 IIEADGHFPQLTAHLQLIDVLNKVL 271 (273)
Q Consensus 247 ~i~~~gH~~~~e~p~~~~~~i~~fl 271 (273)
+++++||++++|+|++|++.|.+|-
T Consensus 229 ~i~~~gH~~~~e~p~~f~~~l~~~~ 253 (256)
T PRK10349 229 IFAKAAHAPFISHPAEFCHLLVALK 253 (256)
T ss_pred EeCCCCCCccccCHHHHHHHHHHHh
Confidence 9999999999999999999999984
No 3
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=6.5e-38 Score=264.52 Aligned_cols=245 Identities=16% Similarity=0.206 Sum_probs=165.6
Q ss_pred ccceEEe--cCCCceEEEecCCCCChhchhhhhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHH
Q 024033 11 AMNAKII--GSGKETLVLAHGFGGDQSIWDKITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITL 88 (273)
Q Consensus 11 ~~~~~~~--G~~~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~ 88 (273)
+++|... |+++++|||+||+++++..|.++++.|+++|+|+++|+||||.|+.+. ..|+ ++++++++.++
T Consensus 13 ~~~~~~~~~~~~~~plvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~-------~~~~-~~~~~~~~~~~ 84 (276)
T TIGR02240 13 SIRTAVRPGKEGLTPLLIFNGIGANLELVFPFIEALDPDLEVIAFDVPGVGGSSTPR-------HPYR-FPGLAKLAARM 84 (276)
T ss_pred EEEEEEecCCCCCCcEEEEeCCCcchHHHHHHHHHhccCceEEEECCCCCCCCCCCC-------CcCc-HHHHHHHHHHH
Confidence 4566554 345578999999999999999999999999999999999999995442 1244 99999999999
Q ss_pred HHHcCCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHHh-ccccc
Q 024033 89 LEENDLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASWA-SSFPR 167 (273)
Q Consensus 89 ~~~~~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 167 (273)
++++++++++|+||||||++++.+|.++|++|++||++++++....... . ...... ............ ..+..
T Consensus 85 i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~----~-~~~~~~-~~~~~~~~~~~~~~~~~~ 158 (276)
T TIGR02240 85 LDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPG----K-PKVLMM-MASPRRYIQPSHGIHIAP 158 (276)
T ss_pred HHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCC----c-hhHHHH-hcCchhhhccccccchhh
Confidence 9999999999999999999999999999999999999998653211100 0 000000 000000000000 00000
Q ss_pred cccCC---CChhhHHHHHHHHHhcCh-hhHHHHHHHhcccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCCCe
Q 024033 168 LVVDT---KDAPSVEKFENCLKRMRH-EFALPLAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKGKS 243 (273)
Q Consensus 168 ~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~ 243 (273)
...+. ..+.....+......... ......... ...+....+++|++|+++++|++|+++|++..+.+.+.+++ +
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~-~ 236 (276)
T TIGR02240 159 DIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAG-LGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIPN-A 236 (276)
T ss_pred hhccceeeccchhhhhhhhhcccCCCchHHHHHHHH-cCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCCC-C
Confidence 00000 011111111111111000 011111111 11223355789999999999999999999999999999986 5
Q ss_pred EEEEcCCCCCCCCccChHHHHHHHHHhhc
Q 024033 244 TVEIIEADGHFPQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 244 ~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 272 (273)
+++++++ ||++++|+|+++++.|++|++
T Consensus 237 ~~~~i~~-gH~~~~e~p~~~~~~i~~fl~ 264 (276)
T TIGR02240 237 ELHIIDD-GHLFLITRAEAVAPIIMKFLA 264 (276)
T ss_pred EEEEEcC-CCchhhccHHHHHHHHHHHHH
Confidence 8889975 999999999999999999984
No 4
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=6e-37 Score=261.01 Aligned_cols=245 Identities=17% Similarity=0.284 Sum_probs=163.9
Q ss_pred ccceEEecCCCceEEEecCCCCChhchhhhhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHH
Q 024033 11 AMNAKIIGSGKETLVLAHGFGGDQSIWDKITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLE 90 (273)
Q Consensus 11 ~~~~~~~G~~~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~ 90 (273)
.++|...|++ ++|||+||++++...|+.+.+.|.+.|+|+++|+||||.|+.+. ..|+ ++++++|+.++++
T Consensus 18 ~i~y~~~G~g-~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~-------~~~~-~~~~a~dl~~ll~ 88 (295)
T PRK03592 18 RMAYIETGEG-DPIVFLHGNPTSSYLWRNIIPHLAGLGRCLAPDLIGMGASDKPD-------IDYT-FADHARYLDAWFD 88 (295)
T ss_pred EEEEEEeCCC-CEEEEECCCCCCHHHHHHHHHHHhhCCEEEEEcCCCCCCCCCCC-------CCCC-HHHHHHHHHHHHH
Confidence 4678888876 68999999999999999999999999999999999999996553 1354 9999999999999
Q ss_pred HcCCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhH---------HHH
Q 024033 91 ENDLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNY---------ASW 161 (273)
Q Consensus 91 ~~~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 161 (273)
++++++++|+||||||.+|+.+|.++|++|+++|++++........ .+... .......+.... ..+
T Consensus 89 ~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 163 (295)
T PRK03592 89 ALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWD----DFPPA-VRELFQALRSPGEGEEMVLEENVF 163 (295)
T ss_pred HhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchh----hcchh-HHHHHHHHhCcccccccccchhhH
Confidence 9999999999999999999999999999999999999743211110 11110 111111111000 000
Q ss_pred hccc-cccccCCCChhhHHHHHHHHHhcChhhH---HHHHHHh-----------cccccccccCCCCCCEEEEecCCCCc
Q 024033 162 ASSF-PRLVVDTKDAPSVEKFENCLKRMRHEFA---LPLAKTV-----------FYSDEREILDKVETPCTIFQPSNDAV 226 (273)
Q Consensus 162 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-----------~~~~~~~~l~~i~~P~lii~G~~D~~ 226 (273)
...+ .........++..+.+...+. .+... ....+.+ ...+....+.+|++|+++|+|++|.+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~ 241 (295)
T PRK03592 164 IERVLPGSILRPLSDEEMAVYRRPFP--TPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAEPGAI 241 (295)
T ss_pred HhhcccCcccccCCHHHHHHHHhhcC--CchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEeccCCcc
Confidence 0000 000000111111122211111 01000 0000000 01123345788999999999999999
Q ss_pred cchhH-HHHHHHHcCCCeEEEEcCCCCCCCCccChHHHHHHHHHhhc
Q 024033 227 VPNSV-AYYMQEKMKGKSTVEIIEADGHFPQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 227 ~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 272 (273)
+++.. .+.+.+..++ +++++++++||++++|+|+++++.|.+|++
T Consensus 242 ~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~ 287 (295)
T PRK03592 242 LTTGAIRDWCRSWPNQ-LEITVFGAGLHFAQEDSPEEIGAAIAAWLR 287 (295)
T ss_pred cCcHHHHHHHHHhhhh-cceeeccCcchhhhhcCHHHHHHHHHHHHH
Confidence 95544 4444555664 589999999999999999999999999984
No 5
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=8.1e-37 Score=266.79 Aligned_cols=252 Identities=21% Similarity=0.276 Sum_probs=164.9
Q ss_pred ccceEEecCC-----CceEEEecCCCCChhchhhhhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHH
Q 024033 11 AMNAKIIGSG-----KETLVLAHGFGGDQSIWDKITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDL 85 (273)
Q Consensus 11 ~~~~~~~G~~-----~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l 85 (273)
+++|...|++ +|+|||+||++++...|.++++.|+++|+|+++|+||||.|+.+. ...|+ ++++++++
T Consensus 73 ~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~------~~~~~-~~~~a~~l 145 (360)
T PLN02679 73 SINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAKNYTVYAIDLLGFGASDKPP------GFSYT-METWAELI 145 (360)
T ss_pred eEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCC------Ccccc-HHHHHHHH
Confidence 6788888864 478999999999999999999999999999999999999996542 12354 99999999
Q ss_pred HHHHHHcCCCceEEEEEChhHHHHHHHHh-hCcccccceEEeecCCCccCCC---CCCCCCChhh---HHHHHH--HHH-
Q 024033 86 ITLLEENDLKSTLFIGHSMSGMIGCIASV-KKPELFKRLILIGTSPRYINTD---DYEGGFEPSD---IENLIS--NVE- 155 (273)
Q Consensus 86 ~~~~~~~~~~~~~lvGhS~GG~ia~~~a~-~~p~~v~~lvl~~~~~~~~~~~---~~~~~~~~~~---~~~~~~--~~~- 155 (273)
.++++++++++++||||||||++++.+++ .+|++|+++|++++........ .+........ +..+.. ...
T Consensus 146 ~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (360)
T PLN02679 146 LDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIAS 225 (360)
T ss_pred HHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHH
Confidence 99999999999999999999999999887 5799999999999754321110 0000000000 000000 000
Q ss_pred HhHH-----HHhccccccccCC-C--ChhhHHHHHHHHHhcChhhHHHHHHHh---cccccccccCCCCCCEEEEecCCC
Q 024033 156 TNYA-----SWASSFPRLVVDT-K--DAPSVEKFENCLKRMRHEFALPLAKTV---FYSDEREILDKVETPCTIFQPSND 224 (273)
Q Consensus 156 ~~~~-----~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~i~~P~lii~G~~D 224 (273)
..+. .....+....... . .++..+.+.... ..+.....+.... ...+....+.+|++|+++|+|++|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D 303 (360)
T PLN02679 226 ALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPA--DDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQD 303 (360)
T ss_pred HHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhc--cCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCC
Confidence 0000 0000000000000 0 111111111100 0111111111111 112344567899999999999999
Q ss_pred CccchhH-----HHHHHHHcCCCeEEEEcCCCCCCCCccChHHHHHHHHHhhc
Q 024033 225 AVVPNSV-----AYYMQEKMKGKSTVEIIEADGHFPQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 225 ~~~~~~~-----~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 272 (273)
.++|+.. .+.+++.+++ +++++|+++||++++|+|+++++.|.+||+
T Consensus 304 ~~~p~~~~~~~~~~~l~~~ip~-~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~ 355 (360)
T PLN02679 304 PFTPLDGPVGKYFSSLPSQLPN-VTLYVLEGVGHCPHDDRPDLVHEKLLPWLA 355 (360)
T ss_pred CCcCchhhHHHHHHhhhccCCc-eEEEEcCCCCCCccccCHHHHHHHHHHHHH
Confidence 9998763 2345666775 689999999999999999999999999985
No 6
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=5.9e-37 Score=255.79 Aligned_cols=233 Identities=15% Similarity=0.180 Sum_probs=156.0
Q ss_pred eEEEecCCCCChhchhhhhhhh-hcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCC-CceEEE
Q 024033 23 TLVLAHGFGGDQSIWDKITPVL-SQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDL-KSTLFI 100 (273)
Q Consensus 23 ~vvllHG~~~~~~~w~~~~~~L-~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~-~~~~lv 100 (273)
.|||+||++.+...|+.+++.| +.+|+|+++|+||||.|+.+. ...|+ ++++++|+.+++++++. ++++|+
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~------~~~~~-~~~~a~dl~~~l~~l~~~~~~~lv 77 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDS------NTVSS-SDQYNRPLFALLSDLPPDHKVILV 77 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCc------cccCC-HHHHHHHHHHHHHhcCCCCCEEEE
Confidence 5999999999999999999999 558999999999999995432 11244 99999999999999987 499999
Q ss_pred EEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHHhccccccccCCCCh--hhH
Q 024033 101 GHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASWASSFPRLVVDTKDA--PSV 178 (273)
Q Consensus 101 GhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 178 (273)
||||||+|++.+|.++|++|+++|++++.+..... ............ ....|...+.... ..... ...
T Consensus 78 GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~------~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~ 147 (255)
T PLN02965 78 GHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGS------IISPRLKNVMEG---TEKIWDYTFGEGP-DKPPTGIMMK 147 (255)
T ss_pred ecCcchHHHHHHHHhCchheeEEEEEccccCCCCC------CccHHHHhhhhc---cccceeeeeccCC-CCCcchhhcC
Confidence 99999999999999999999999999985311000 000001100000 0000100000000 00000 000
Q ss_pred HHHH-HHHHhcChhhHHHHH-HHh---------cccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCCCeEEEE
Q 024033 179 EKFE-NCLKRMRHEFALPLA-KTV---------FYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKGKSTVEI 247 (273)
Q Consensus 179 ~~~~-~~~~~~~~~~~~~~~-~~~---------~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~ 247 (273)
.++. ..+....+....... ..+ ...+....+.++++|+++|+|++|.++|+...+.+++.+++ +++++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~-a~~~~ 226 (255)
T PLN02965 148 PEFVRHYYYNQSPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPP-AQTYV 226 (255)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCc-ceEEE
Confidence 0010 000000000000000 000 00112234567999999999999999999999999999996 58899
Q ss_pred cCCCCCCCCccChHHHHHHHHHhhcC
Q 024033 248 IEADGHFPQLTAHLQLIDVLNKVLGF 273 (273)
Q Consensus 248 i~~~gH~~~~e~p~~~~~~i~~fl~~ 273 (273)
++++||++++|+|++|++.|.+|+++
T Consensus 227 i~~~GH~~~~e~p~~v~~~l~~~~~~ 252 (255)
T PLN02965 227 LEDSDHSAFFSVPTTLFQYLLQAVSS 252 (255)
T ss_pred ecCCCCchhhcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999864
No 7
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=100.00 E-value=3.4e-36 Score=247.42 Aligned_cols=240 Identities=18% Similarity=0.300 Sum_probs=163.0
Q ss_pred cCCCceEEEecCCCCChhchhhhhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCCCce
Q 024033 18 GSGKETLVLAHGFGGDQSIWDKITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDLKST 97 (273)
Q Consensus 18 G~~~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~~~~ 97 (273)
|+|+++|||+||+++++..|+.+.+.|.++|+|+++|+||||.|+... .+ +++++++++.+.++ +++
T Consensus 1 g~g~~~iv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~--------~~-~~~~~~~~~~~~~~----~~~ 67 (245)
T TIGR01738 1 GQGNVHLVLIHGWGMNAEVFRCLDEELSAHFTLHLVDLPGHGRSRGFG--------PL-SLADAAEAIAAQAP----DPA 67 (245)
T ss_pred CCCCceEEEEcCCCCchhhHHHHHHhhccCeEEEEecCCcCccCCCCC--------Cc-CHHHHHHHHHHhCC----CCe
Confidence 556678999999999999999999999999999999999999984321 13 48888888876543 689
Q ss_pred EEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHHhccccc-cccCCC-Ch
Q 024033 98 LFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASWASSFPR-LVVDTK-DA 175 (273)
Q Consensus 98 ~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~ 175 (273)
+++||||||.+++.+|.++|++++++|++++.+.......+...+.......+...+...+......+.. ...+.. ..
T Consensus 68 ~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (245)
T TIGR01738 68 IWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTAR 147 (245)
T ss_pred EEEEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCccc
Confidence 9999999999999999999999999999998765433222322222222222211111111111110100 000111 11
Q ss_pred hhHHHHHHHHHhcC-h--hhHHHHHHHhcccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCCCeEEEEcCCCC
Q 024033 176 PSVEKFENCLKRMR-H--EFALPLAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKGKSTVEIIEADG 252 (273)
Q Consensus 176 ~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~g 252 (273)
.....+...+.... + .............+....+.+|++|+++++|++|..+|+...+.+++.+++ +++++++++|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~g 226 (245)
T TIGR01738 148 QDARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPH-SELYIFAKAA 226 (245)
T ss_pred hHHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCCC-CeEEEeCCCC
Confidence 11111222121111 1 111111222223345566889999999999999999999999999998885 5899999999
Q ss_pred CCCCccChHHHHHHHHHhh
Q 024033 253 HFPQLTAHLQLIDVLNKVL 271 (273)
Q Consensus 253 H~~~~e~p~~~~~~i~~fl 271 (273)
|++++|+|++|++.|.+|+
T Consensus 227 H~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 227 HAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred CCccccCHHHHHHHHHhhC
Confidence 9999999999999999996
No 8
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1.4e-36 Score=259.58 Aligned_cols=246 Identities=16% Similarity=0.205 Sum_probs=162.9
Q ss_pred cccceEEecC-CCceEEEecCCCCChhchhhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHH
Q 024033 10 AAMNAKIIGS-GKETLVLAHGFGGDQSIWDKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLIT 87 (273)
Q Consensus 10 ~~~~~~~~G~-~~~~vvllHG~~~~~~~w~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~ 87 (273)
..++|...|+ .+++|||+||++++...|..+++.|++ +|+|+++|+||||.|+.+. ....|+ ++++++++.+
T Consensus 34 ~~i~y~~~G~~~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~-----~~~~~~-~~~~a~~l~~ 107 (302)
T PRK00870 34 LRMHYVDEGPADGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPT-----RREDYT-YARHVEWMRS 107 (302)
T ss_pred EEEEEEecCCCCCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCC-----CcccCC-HHHHHHHHHH
Confidence 4578888885 347899999999999999999999986 7999999999999996542 112354 9999999999
Q ss_pred HHHHcCCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHH---HH-hHHHHhc
Q 024033 88 LLEENDLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNV---ET-NYASWAS 163 (273)
Q Consensus 88 ~~~~~~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~ 163 (273)
+++++++++++|+||||||++++.+|.++|++|+++|++++.... ..... ......+.... .. ....+..
T Consensus 108 ~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 181 (302)
T PRK00870 108 WFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPT-GDGPM-----PDAFWAWRAFSQYSPVLPVGRLVN 181 (302)
T ss_pred HHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCC-ccccc-----hHHHhhhhcccccCchhhHHHHhh
Confidence 999999999999999999999999999999999999999864211 00000 00000000000 00 0000000
Q ss_pred cccccccCCCChhhHHHHHHHHHhcChhhHHHHHHH-----------hcccccccccCCCCCCEEEEecCCCCccchhHH
Q 024033 164 SFPRLVVDTKDAPSVEKFENCLKRMRHEFALPLAKT-----------VFYSDEREILDKVETPCTIFQPSNDAVVPNSVA 232 (273)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~ 232 (273)
.. ......+.....+.................. ....+.+..+.++++|+++|+|++|.++|...
T Consensus 182 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~- 257 (302)
T PRK00870 182 GG---TVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPITGGGD- 257 (302)
T ss_pred cc---ccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCcccCch-
Confidence 00 0000000111111000000000000000000 00111234578999999999999999999866
Q ss_pred HHHHHHcCCCeE---EEEcCCCCCCCCccChHHHHHHHHHhhc
Q 024033 233 YYMQEKMKGKST---VEIIEADGHFPQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 233 ~~~~~~~~~~~~---~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 272 (273)
+.+++.+++ ++ +++++++||++++|+|++|++.|.+|++
T Consensus 258 ~~~~~~~~~-~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~ 299 (302)
T PRK00870 258 AILQKRIPG-AAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIR 299 (302)
T ss_pred HHHHhhccc-ccccceeeecCCCccchhhChHHHHHHHHHHHh
Confidence 788888885 34 7889999999999999999999999985
No 9
>PRK06489 hypothetical protein; Provisional
Probab=100.00 E-value=7.6e-36 Score=260.90 Aligned_cols=253 Identities=16% Similarity=0.215 Sum_probs=162.6
Q ss_pred cccceEEecCC--------CceEEEecCCCCChhchh--hhhhhh--------hcCceEEEEecCCCccccCCCCCCCCC
Q 024033 10 AAMNAKIIGSG--------KETLVLAHGFGGDQSIWD--KITPVL--------SQHYRVLAFDWLFSGAILNKDHQSLYN 71 (273)
Q Consensus 10 ~~~~~~~~G~~--------~~~vvllHG~~~~~~~w~--~~~~~L--------~~~~~via~D~~G~G~S~~~~~~~~~~ 71 (273)
..++|+..|++ +|+|||+||++++...|. .+.+.| +++|+||++|+||||.|+.+.......
T Consensus 50 ~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~ 129 (360)
T PRK06489 50 LRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAA 129 (360)
T ss_pred ceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCC
Confidence 35688888874 478999999999988886 454444 678999999999999996553100000
Q ss_pred CcccccHHHHHHHHHHHH-HHcCCCceE-EEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHH
Q 024033 72 PVKYSSYEAFADDLITLL-EENDLKSTL-FIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIEN 149 (273)
Q Consensus 72 ~~~~~s~~~~a~~l~~~~-~~~~~~~~~-lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 149 (273)
...|+ ++++++++.+++ +++++++++ |+||||||++|+.+|.++|++|+++|++++.+....... .....
T Consensus 130 ~~~~~-~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~-------~~~~~ 201 (360)
T PRK06489 130 FPRYD-YDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRN-------WMWRR 201 (360)
T ss_pred CCccc-HHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHH-------HHHHH
Confidence 11355 999999998854 889999985 899999999999999999999999999987643111000 00000
Q ss_pred H-HHHHHHh--------------HHHHhccc---c-c---cc-cCCCChhhHHHHHHH-H---HhcChhhHHHHHHHhcc
Q 024033 150 L-ISNVETN--------------YASWASSF---P-R---LV-VDTKDAPSVEKFENC-L---KRMRHEFALPLAKTVFY 202 (273)
Q Consensus 150 ~-~~~~~~~--------------~~~~~~~~---~-~---~~-~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~ 202 (273)
. ....... ...+...+ . . .. ...........+.+. . ....+............
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (360)
T PRK06489 202 MLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFLYQWDSSRD 281 (360)
T ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHHHHHHHhhc
Confidence 0 0000000 00000000 0 0 00 000000111111111 1 11111111111111123
Q ss_pred cccccccCCCCCCEEEEecCCCCccchhHH--HHHHHHcCCCeEEEEcCCC----CCCCCccChHHHHHHHHHhhc
Q 024033 203 SDEREILDKVETPCTIFQPSNDAVVPNSVA--YYMQEKMKGKSTVEIIEAD----GHFPQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 203 ~~~~~~l~~i~~P~lii~G~~D~~~~~~~~--~~~~~~~~~~~~~~~i~~~----gH~~~~e~p~~~~~~i~~fl~ 272 (273)
.+....+.+|++|+++|+|++|.++|++.. +.+++.+|+ +++++|+++ ||+++ |+|++|++.|.+||+
T Consensus 282 ~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~-a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~ 355 (360)
T PRK06489 282 YNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKH-GRLVLIPASPETRGHGTT-GSAKFWKAYLAEFLA 355 (360)
T ss_pred cChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcC-CeEEEECCCCCCCCcccc-cCHHHHHHHHHHHHH
Confidence 355677899999999999999999998865 788999986 589999996 99997 899999999999985
No 10
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=100.00 E-value=2.2e-35 Score=249.52 Aligned_cols=255 Identities=17% Similarity=0.188 Sum_probs=167.1
Q ss_pred cccccccc-cccceEEecCCCceEEEecCCCCChhchhh---hhhhhh-cCceEEEEecCCCccccCCCCCCCCCCcccc
Q 024033 2 VIREQGLS-AAMNAKIIGSGKETLVLAHGFGGDQSIWDK---ITPVLS-QHYRVLAFDWLFSGAILNKDHQSLYNPVKYS 76 (273)
Q Consensus 2 ~~~~~~~~-~~~~~~~~G~~~~~vvllHG~~~~~~~w~~---~~~~L~-~~~~via~D~~G~G~S~~~~~~~~~~~~~~~ 76 (273)
+++.+|.. ..++|+..|++ ++|||+||++.+...|.. .+..|. ++|+|+++|+||||.|+.+.. + ...
T Consensus 11 ~~~~~~~~~~~~~y~~~g~~-~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~----~--~~~ 83 (282)
T TIGR03343 11 KINEKGLSNFRIHYNEAGNG-EAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVM----D--EQR 83 (282)
T ss_pred EcccccccceeEEEEecCCC-CeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcC----c--ccc
Confidence 34556664 56788888876 689999999998888864 344554 479999999999999954320 0 111
Q ss_pred cHHHHHHHHHHHHHHcCCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHH--
Q 024033 77 SYEAFADDLITLLEENDLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNV-- 154 (273)
Q Consensus 77 s~~~~a~~l~~~~~~~~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 154 (273)
...+++++.++++++++++++++||||||++++.+|.++|++|+++|+++++... .. ... ......+.......
T Consensus 84 -~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~-~~-~~~-~~~~~~~~~~~~~~~~ 159 (282)
T TIGR03343 84 -GLVNARAVKGLMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLG-PS-LFA-PMPMEGIKLLFKLYAE 159 (282)
T ss_pred -cchhHHHHHHHHHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCC-cc-ccc-cCchHHHHHHHHHhcC
Confidence 2257899999999999999999999999999999999999999999999875321 00 000 00001111111110
Q ss_pred --HHhHHHHhccccccccCC-C-ChhhHHHHHHHHHhcChhhHHHHHHH-----hcccccccccCCCCCCEEEEecCCCC
Q 024033 155 --ETNYASWASSFPRLVVDT-K-DAPSVEKFENCLKRMRHEFALPLAKT-----VFYSDEREILDKVETPCTIFQPSNDA 225 (273)
Q Consensus 155 --~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~i~~P~lii~G~~D~ 225 (273)
...+..+...+ .... . .+...+........ .+.....+... ....+....+++|++|+++++|++|.
T Consensus 160 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~ 235 (282)
T TIGR03343 160 PSYETLKQMLNVF---LFDQSLITEELLQGRWENIQR-QPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDR 235 (282)
T ss_pred CCHHHHHHHHhhC---ccCcccCcHHHHHhHHHHhhc-CHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCC
Confidence 00111111110 0111 0 11111111111111 11111111110 01123345678999999999999999
Q ss_pred ccchhHHHHHHHHcCCCeEEEEcCCCCCCCCccChHHHHHHHHHhhc
Q 024033 226 VVPNSVAYYMQEKMKGKSTVEIIEADGHFPQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 272 (273)
++++...+.+++.+++ +++++++++||+++.|+|+.|++.|.+|+.
T Consensus 236 ~v~~~~~~~~~~~~~~-~~~~~i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 236 FVPLDHGLKLLWNMPD-AQLHVFSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred cCCchhHHHHHHhCCC-CEEEEeCCCCcCCcccCHHHHHHHHHHHhh
Confidence 9999999999999986 589999999999999999999999999985
No 11
>PLN02578 hydrolase
Probab=100.00 E-value=3.3e-35 Score=256.26 Aligned_cols=250 Identities=19% Similarity=0.268 Sum_probs=168.5
Q ss_pred ccceEEecCCCceEEEecCCCCChhchhhhhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHH
Q 024033 11 AMNAKIIGSGKETLVLAHGFGGDQSIWDKITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLE 90 (273)
Q Consensus 11 ~~~~~~~G~~~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~ 90 (273)
.++|...|+| ++|||+||+++++..|.++++.|+++|+|+++|+||||.|+++. ..|+ .+.+++++.++++
T Consensus 77 ~i~Y~~~g~g-~~vvliHG~~~~~~~w~~~~~~l~~~~~v~~~D~~G~G~S~~~~-------~~~~-~~~~a~~l~~~i~ 147 (354)
T PLN02578 77 KIHYVVQGEG-LPIVLIHGFGASAFHWRYNIPELAKKYKVYALDLLGFGWSDKAL-------IEYD-AMVWRDQVADFVK 147 (354)
T ss_pred EEEEEEcCCC-CeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCcc-------cccC-HHHHHHHHHHHHH
Confidence 4677777876 67999999999999999999999999999999999999996542 2365 9999999999999
Q ss_pred HcCCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCC-CCCC--ChhhHHH-HHHHHHHhHHHHhc---
Q 024033 91 ENDLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDY-EGGF--EPSDIEN-LISNVETNYASWAS--- 163 (273)
Q Consensus 91 ~~~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~--~~~~~~~-~~~~~~~~~~~~~~--- 163 (273)
.++.++++++||||||++++.+|.++|++|++++++++++........ .... ....... ........+..+..
T Consensus 148 ~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (354)
T PLN02578 148 EVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFL 227 (354)
T ss_pred HhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999876543211100 0000 0000000 00000000000000
Q ss_pred -----------cccccccCCCChhhHHHHHHHHH--hcChhhH---HHHHHHhc----ccccccccCCCCCCEEEEecCC
Q 024033 164 -----------SFPRLVVDTKDAPSVEKFENCLK--RMRHEFA---LPLAKTVF----YSDEREILDKVETPCTIFQPSN 223 (273)
Q Consensus 164 -----------~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~----~~~~~~~l~~i~~P~lii~G~~ 223 (273)
.......... ....+.+.+... ..++... ..+..... ..+..+.++++++|+++|+|++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~ 306 (354)
T PLN02578 228 FWQAKQPSRIESVLKSVYKDK-SNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWGDL 306 (354)
T ss_pred HHHhcCHHHHHHHHHHhcCCc-ccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEeCC
Confidence 0000000000 000011111110 1111111 11111111 1224456789999999999999
Q ss_pred CCccchhHHHHHHHHcCCCeEEEEcCCCCCCCCccChHHHHHHHHHhhc
Q 024033 224 DAVVPNSVAYYMQEKMKGKSTVEIIEADGHFPQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 224 D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 272 (273)
|.++|....+.+++.+++ .+++++ ++||++++|+|+++++.|.+|++
T Consensus 307 D~~v~~~~~~~l~~~~p~-a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 307 DPWVGPAKAEKIKAFYPD-TTLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred CCCCCHHHHHHHHHhCCC-CEEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 999999999999999986 588888 59999999999999999999985
No 12
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=8.7e-36 Score=252.70 Aligned_cols=245 Identities=13% Similarity=0.156 Sum_probs=159.6
Q ss_pred ccceEEecCCCceEEEecCCCCChhchhhhhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHH
Q 024033 11 AMNAKIIGSGKETLVLAHGFGGDQSIWDKITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLE 90 (273)
Q Consensus 11 ~~~~~~~G~~~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~ 90 (273)
.++|...|++ ++|||+||++.+...|+.+.+.|.++|+|+++|+||||.|+.+. ...|+ ++++++++.++++
T Consensus 25 ~i~y~~~G~~-~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~------~~~~~-~~~~~~~~~~~~~ 96 (286)
T PRK03204 25 RIHYIDEGTG-PPILLCHGNPTWSFLYRDIIVALRDRFRCVAPDYLGFGLSERPS------GFGYQ-IDEHARVIGEFVD 96 (286)
T ss_pred EEEEEECCCC-CEEEEECCCCccHHHHHHHHHHHhCCcEEEEECCCCCCCCCCCC------ccccC-HHHHHHHHHHHHH
Confidence 4677777875 78999999999999999999999999999999999999996543 11244 9999999999999
Q ss_pred HcCCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHH---HHh--HHHHhccc
Q 024033 91 ENDLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNV---ETN--YASWASSF 165 (273)
Q Consensus 91 ~~~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~ 165 (273)
++++++++++||||||++++.++..+|++|+++|++++... .... .....+....... ... ...+...+
T Consensus 97 ~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (286)
T PRK03204 97 HLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFW--PADT----LAMKAFSRVMSSPPVQYAILRRNFFVERL 170 (286)
T ss_pred HhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECcccc--CCCc----hhHHHHHHHhccccchhhhhhhhHHHHHh
Confidence 99999999999999999999999999999999999875321 1100 0000000000000 000 00000000
Q ss_pred ccc-ccCCCChhhHHHHHHHHHhcChhhHHHHH---HHhc--c---cccccccC--CCCCCEEEEecCCCCccchh-HHH
Q 024033 166 PRL-VVDTKDAPSVEKFENCLKRMRHEFALPLA---KTVF--Y---SDEREILD--KVETPCTIFQPSNDAVVPNS-VAY 233 (273)
Q Consensus 166 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~---~~~~~~l~--~i~~P~lii~G~~D~~~~~~-~~~ 233 (273)
... ......+...+.+.. . ...+.....+. .... . .+....+. .+++|+++|+|++|.++++. ..+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~ 248 (286)
T PRK03204 171 IPAGTEHRPSSAVMAHYRA-V-QPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRPKTILP 248 (286)
T ss_pred ccccccCCCCHHHHHHhcC-C-CCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHH
Confidence 000 000111111111110 0 00111100000 0000 0 01111111 13899999999999988654 578
Q ss_pred HHHHHcCCCeEEEEcCCCCCCCCccChHHHHHHHHHhhc
Q 024033 234 YMQEKMKGKSTVEIIEADGHFPQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 234 ~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 272 (273)
.+++.+|+ +++++++++||++++|+|+++++.|.+|++
T Consensus 249 ~~~~~ip~-~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~~ 286 (286)
T PRK03204 249 RLRATFPD-HVLVELPNAKHFIQEDAPDRIAAAIIERFG 286 (286)
T ss_pred HHHHhcCC-CeEEEcCCCcccccccCHHHHHHHHHHhcC
Confidence 88999996 589999999999999999999999999985
No 13
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=100.00 E-value=3.3e-35 Score=242.23 Aligned_cols=249 Identities=20% Similarity=0.362 Sum_probs=171.4
Q ss_pred ccceEEecC--CCceEEEecCCCCChhchhhhhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHH
Q 024033 11 AMNAKIIGS--GKETLVLAHGFGGDQSIWDKITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITL 88 (273)
Q Consensus 11 ~~~~~~~G~--~~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~ 88 (273)
+++|+..|+ ++|+|||+||++.+...|.++++.|+++|+|+++|+||||.|+.+. ..+ +++++++++.++
T Consensus 1 ~~~~~~~g~~~~~~~li~~hg~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~-------~~~-~~~~~~~~~~~~ 72 (251)
T TIGR02427 1 RLHYRLDGAADGAPVLVFINSLGTDLRMWDPVLPALTPDFRVLRYDKRGHGLSDAPE-------GPY-SIEDLADDVLAL 72 (251)
T ss_pred CceEEeecCCCCCCeEEEEcCcccchhhHHHHHHHhhcccEEEEecCCCCCCCCCCC-------CCC-CHHHHHHHHHHH
Confidence 357777785 4678999999999999999999999999999999999999994332 234 499999999999
Q ss_pred HHHcCCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHHhcccccc
Q 024033 89 LEENDLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASWASSFPRL 168 (273)
Q Consensus 89 ~~~~~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (273)
++.++.++++++||||||++++.+|.++|++|+++++++++........+......................|. ...
T Consensus 73 i~~~~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 149 (251)
T TIGR02427 73 LDHLGIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWF---TPG 149 (251)
T ss_pred HHHhCCCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHc---ccc
Confidence 99999999999999999999999999999999999999865432111000000000000000000000011111 111
Q ss_pred ccCCCChhhHHHHHHHHHhcChhhHHHHHHHhcccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCCCeEEEEc
Q 024033 169 VVDTKDAPSVEKFENCLKRMRHEFALPLAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKGKSTVEII 248 (273)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i 248 (273)
. ....+...+.+.+.+..............+...+....+.++++|+++++|++|..+|.+..+.+.+.+++ .+++++
T Consensus 150 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~-~~~~~~ 227 (251)
T TIGR02427 150 F-REAHPARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVPG-ARFAEI 227 (251)
T ss_pred c-ccCChHHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCCC-ceEEEE
Confidence 1 11111122222222222222221222222223345566788999999999999999999988888888885 588999
Q ss_pred CCCCCCCCccChHHHHHHHHHhhc
Q 024033 249 EADGHFPQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 249 ~~~gH~~~~e~p~~~~~~i~~fl~ 272 (273)
+++||++++|+|+++.+.|++|+.
T Consensus 228 ~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 228 RGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred CCCCCcccccChHHHHHHHHHHhC
Confidence 999999999999999999999984
No 14
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=100.00 E-value=1.3e-35 Score=245.34 Aligned_cols=232 Identities=16% Similarity=0.194 Sum_probs=149.4
Q ss_pred CceEEEecCCCCChhchhhhhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCCCceEEE
Q 024033 21 KETLVLAHGFGGDQSIWDKITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDLKSTLFI 100 (273)
Q Consensus 21 ~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~~~~~lv 100 (273)
+|+|||+||+++++..|+++.+.|+ +|+|+++|+||||.|+.+. .. +++++++++.++++++++++++|+
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l~-~~~vi~~D~~G~G~S~~~~--------~~-~~~~~~~~l~~~l~~~~~~~~~lv 71 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEALP-DYPRLYIDLPGHGGSAAIS--------VD-GFADVSRLLSQTLQSYNILPYWLV 71 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHcC-CCCEEEecCCCCCCCCCcc--------cc-CHHHHHHHHHHHHHHcCCCCeEEE
Confidence 4789999999999999999999995 7999999999999995542 12 599999999999999999999999
Q ss_pred EEChhHHHHHHHHhhCccc-ccceEEeecCCCccCCCCC-CCCCChhhHHHHHH--HHHHhHHHHhccccccccCCCChh
Q 024033 101 GHSMSGMIGCIASVKKPEL-FKRLILIGTSPRYINTDDY-EGGFEPSDIENLIS--NVETNYASWASSFPRLVVDTKDAP 176 (273)
Q Consensus 101 GhS~GG~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 176 (273)
||||||.+|+.+|.++|+. |++++++++.+........ ........+..... ........|.. ........+.
T Consensus 72 G~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 148 (242)
T PRK11126 72 GYSLGGRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQ---QPVFASLNAE 148 (242)
T ss_pred EECHHHHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHh---cchhhccCcc
Confidence 9999999999999999764 9999998765432111000 00000000000000 00000111110 0000000111
Q ss_pred hHHHHHHHHHhcChhhHHHHHHHh---cccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCCCeEEEEcCCCCC
Q 024033 177 SVEKFENCLKRMRHEFALPLAKTV---FYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKGKSTVEIIEADGH 253 (273)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH 253 (273)
....+................... ...+.++.+.++++|+++|+|++|..+. .+++.. .+++++++++||
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~~--~~~~~~i~~~gH 221 (242)
T PRK11126 149 QRQQLVAKRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQL--ALPLHVIPNAGH 221 (242)
T ss_pred HHHHHHHhcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHHh--cCeEEEeCCCCC
Confidence 111111111110111111111111 1234556788999999999999998652 233333 258999999999
Q ss_pred CCCccChHHHHHHHHHhhc
Q 024033 254 FPQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 254 ~~~~e~p~~~~~~i~~fl~ 272 (273)
++++|+|+++++.|.+|++
T Consensus 222 ~~~~e~p~~~~~~i~~fl~ 240 (242)
T PRK11126 222 NAHRENPAAFAASLAQILR 240 (242)
T ss_pred chhhhChHHHHHHHHHHHh
Confidence 9999999999999999985
No 15
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=2.8e-35 Score=243.00 Aligned_cols=251 Identities=18% Similarity=0.242 Sum_probs=169.3
Q ss_pred ccceEEecC-CCceEEEecCCCCChhchhhhhhhhhcC-ceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHH
Q 024033 11 AMNAKIIGS-GKETLVLAHGFGGDQSIWDKITPVLSQH-YRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITL 88 (273)
Q Consensus 11 ~~~~~~~G~-~~~~vvllHG~~~~~~~w~~~~~~L~~~-~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~ 88 (273)
.+|+...|+ ++|.|+|+|||+...-+|+.+++.|+.. |||+|+|+||+|.|+.|.+ ...|+ +..++.|+..+
T Consensus 33 ~~h~~e~g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~-----~~~Yt-~~~l~~di~~l 106 (322)
T KOG4178|consen 33 RLHYVEGGPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPH-----ISEYT-IDELVGDIVAL 106 (322)
T ss_pred EEEEEeecCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCC-----cceee-HHHHHHHHHHH
Confidence 456666674 4688999999999999999999999995 9999999999999988752 24576 99999999999
Q ss_pred HHHcCCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCC-----------CCC-CCCCCh-hhHHHHHHHHH
Q 024033 89 LEENDLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINT-----------DDY-EGGFEP-SDIENLISNVE 155 (273)
Q Consensus 89 ~~~~~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-----------~~~-~~~~~~-~~~~~~~~~~~ 155 (273)
+++++.++++++||+||++||+.+|+.+|++|+++|.++.+...-.. +++ .-.++. ...+..++..
T Consensus 107 ld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~- 185 (322)
T KOG4178|consen 107 LDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPETELSKD- 185 (322)
T ss_pred HHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEeccccCcchhhhccc-
Confidence 99999999999999999999999999999999999999875330000 000 000110 0111111100
Q ss_pred HhHHHHhccc------cccccCC--C------ChhhHHHHHHHHHhcChhhH---HHHHHHhcccc--cccccCCCCCCE
Q 024033 156 TNYASWASSF------PRLVVDT--K------DAPSVEKFENCLKRMRHEFA---LPLAKTVFYSD--EREILDKVETPC 216 (273)
Q Consensus 156 ~~~~~~~~~~------~~~~~~~--~------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~~l~~i~~P~ 216 (273)
..+.....| .+..... + .++.++.+...+ ....+ ....+.+.... .-..+.+|++|+
T Consensus 186 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f---~~~g~~gplNyyrn~~r~w~a~~~~~~~i~iPv 261 (322)
T KOG4178|consen 186 -DTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKF---QIDGFTGPLNYYRNFRRNWEAAPWALAKITIPV 261 (322)
T ss_pred -hhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhcc---ccccccccchhhHHHhhCchhccccccccccce
Confidence 000000000 0001110 0 011122222211 11111 11122221111 123467899999
Q ss_pred EEEecCCCCccchh-HHHHHHHHcCCCeEEEEcCCCCCCCCccChHHHHHHHHHhhc
Q 024033 217 TIFQPSNDAVVPNS-VAYYMQEKMKGKSTVEIIEADGHFPQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 217 lii~G~~D~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 272 (273)
++++|+.|.+.+.. ....+++.++...+.++++++||+++.|+|++++++|.+|++
T Consensus 262 ~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~ 318 (322)
T KOG4178|consen 262 LFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFIN 318 (322)
T ss_pred EEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHH
Confidence 99999999998876 466677778865578899999999999999999999999985
No 16
>PRK10673 acyl-CoA esterase; Provisional
Probab=100.00 E-value=1.1e-34 Score=241.53 Aligned_cols=234 Identities=17% Similarity=0.224 Sum_probs=158.7
Q ss_pred CCceEEEecCCCCChhchhhhhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCCCceEE
Q 024033 20 GKETLVLAHGFGGDQSIWDKITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDLKSTLF 99 (273)
Q Consensus 20 ~~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~~~~~l 99 (273)
++|+|||+||++++...|..+...|+++|+|+++|+||||.|+.+. .++ ++++++|+.++++.+++++++|
T Consensus 15 ~~~~iv~lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~s~~~~--------~~~-~~~~~~d~~~~l~~l~~~~~~l 85 (255)
T PRK10673 15 NNSPIVLVHGLFGSLDNLGVLARDLVNDHDIIQVDMRNHGLSPRDP--------VMN-YPAMAQDLLDTLDALQIEKATF 85 (255)
T ss_pred CCCCEEEECCCCCchhHHHHHHHHHhhCCeEEEECCCCCCCCCCCC--------CCC-HHHHHHHHHHHHHHcCCCceEE
Confidence 4578999999999999999999999999999999999999995432 244 9999999999999999999999
Q ss_pred EEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHH---hccccccccCCCChh
Q 024033 100 IGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASW---ASSFPRLVVDTKDAP 176 (273)
Q Consensus 100 vGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 176 (273)
+||||||++++.+|.++|++|+++|+++++|...... ........+..........+ ...+... .. +.
T Consensus 86 vGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~ 156 (255)
T PRK10673 86 IGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVR-----RHDEIFAAINAVSEAGATTRQQAAAIMRQH-LN---EE 156 (255)
T ss_pred EEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccch-----hhHHHHHHHHHhhhcccccHHHHHHHHHHh-cC---CH
Confidence 9999999999999999999999999998765321110 00000000000000000000 0000000 00 00
Q ss_pred hHHHHH-HHHHhcChhhHH-HHHHHhcccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCCCeEEEEcCCCCCC
Q 024033 177 SVEKFE-NCLKRMRHEFAL-PLAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKGKSTVEIIEADGHF 254 (273)
Q Consensus 177 ~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~ 254 (273)
....+. +.+......... ............+.++++++|+++|+|++|..++++..+.+++.+++ +++++++++||+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~ 235 (255)
T PRK10673 157 GVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQ-ARAHVIAGAGHW 235 (255)
T ss_pred HHHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCC-cEEEEeCCCCCe
Confidence 000000 000000000000 00000000112235678899999999999999999999999999986 588999999999
Q ss_pred CCccChHHHHHHHHHhhc
Q 024033 255 PQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 255 ~~~e~p~~~~~~i~~fl~ 272 (273)
+++|+|+++++.|++||+
T Consensus 236 ~~~~~p~~~~~~l~~fl~ 253 (255)
T PRK10673 236 VHAEKPDAVLRAIRRYLN 253 (255)
T ss_pred eeccCHHHHHHHHHHHHh
Confidence 999999999999999985
No 17
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=100.00 E-value=5.5e-35 Score=242.47 Aligned_cols=246 Identities=21% Similarity=0.351 Sum_probs=166.8
Q ss_pred cceEEecC---CCceEEEecCCCCChhchhhhhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHH
Q 024033 12 MNAKIIGS---GKETLVLAHGFGGDQSIWDKITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITL 88 (273)
Q Consensus 12 ~~~~~~G~---~~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~ 88 (273)
++|+.+|+ ++|+|||+||+++++..|..+++.|.++|+|+++|+||||.|+.+. ...|+ ++++++++.++
T Consensus 1 ~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~------~~~~~-~~~~~~~~~~~ 73 (257)
T TIGR03611 1 MHYELHGPPDADAPVVVLSSGLGGSGSYWAPQLDVLTQRFHVVTYDHRGTGRSPGEL------PPGYS-IAHMADDVLQL 73 (257)
T ss_pred CEEEEecCCCCCCCEEEEEcCCCcchhHHHHHHHHHHhccEEEEEcCCCCCCCCCCC------cccCC-HHHHHHHHHHH
Confidence 36778873 4678999999999999999999999999999999999999995432 12354 99999999999
Q ss_pred HHHcCCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHh-HHHHhc---c
Q 024033 89 LEENDLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETN-YASWAS---S 164 (273)
Q Consensus 89 ~~~~~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~ 164 (273)
++.++.++++|+||||||++++.+|.++|++|+++|++++....... ...........+... ...+.. .
T Consensus 74 i~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (257)
T TIGR03611 74 LDALNIERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPH-------TRRCFDVRIALLQHAGPEAYVHAQAL 146 (257)
T ss_pred HHHhCCCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChh-------HHHHHHHHHHHHhccCcchhhhhhhh
Confidence 99999999999999999999999999999999999999864321000 000000000000000 000000 0
Q ss_pred --ccccccCCCChhhHHHHHHHHHhc-ChhhHHHHHHHhcccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCC
Q 024033 165 --FPRLVVDTKDAPSVEKFENCLKRM-RHEFALPLAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKG 241 (273)
Q Consensus 165 --~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~ 241 (273)
+.........+............. ...............+....++++++|+++++|++|..+|++..+.+++.+++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 226 (257)
T TIGR03611 147 FLYPADWISENAARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALPN 226 (257)
T ss_pred hhccccHhhccchhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcCC
Confidence 000000000000000000000000 00111111111222345566788999999999999999999998899998885
Q ss_pred CeEEEEcCCCCCCCCccChHHHHHHHHHhhc
Q 024033 242 KSTVEIIEADGHFPQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 242 ~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 272 (273)
.+++.++++||++++|+|+++++.|.+||+
T Consensus 227 -~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 227 -AQLKLLPYGGHASNVTDPETFNRALLDFLK 256 (257)
T ss_pred -ceEEEECCCCCCccccCHHHHHHHHHHHhc
Confidence 588999999999999999999999999985
No 18
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=100.00 E-value=2.5e-34 Score=241.96 Aligned_cols=246 Identities=15% Similarity=0.215 Sum_probs=165.8
Q ss_pred cceEEecC-CCceEEEecCCCCChhchhhhhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHH
Q 024033 12 MNAKIIGS-GKETLVLAHGFGGDQSIWDKITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLE 90 (273)
Q Consensus 12 ~~~~~~G~-~~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~ 90 (273)
++|+..|+ ++++|||+||++++...|+++.+.|+++|+|+++|+||||.|+.+. ...+ +++++++++.++++
T Consensus 18 ~~~~~~g~~~~~~vv~~hG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~------~~~~-~~~~~~~~l~~~i~ 90 (278)
T TIGR03056 18 WHVQDMGPTAGPLLLLLHGTGASTHSWRDLMPPLARSFRVVAPDLPGHGFTRAPF------RFRF-TLPSMAEDLSALCA 90 (278)
T ss_pred EEEEecCCCCCCeEEEEcCCCCCHHHHHHHHHHHhhCcEEEeecCCCCCCCCCcc------ccCC-CHHHHHHHHHHHHH
Confidence 56777775 3578999999999999999999999999999999999999995543 1135 49999999999999
Q ss_pred HcCCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHH--HHHhH--------HH
Q 024033 91 ENDLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISN--VETNY--------AS 160 (273)
Q Consensus 91 ~~~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--------~~ 160 (273)
++++++++|+||||||++++.+|.++|++++++|++++....... .. ............. ..... ..
T Consensus 91 ~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (278)
T TIGR03056 91 AEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEG--MA-GTLFPYMARVLACNPFTPPMMSRGAADQQR 167 (278)
T ss_pred HcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCccccccc--cc-ccccchhhHhhhhcccchHHHHhhcccCcc
Confidence 999999999999999999999999999999999999875431110 00 0000000000000 00000 00
Q ss_pred HhccccccccCCC-ChhhHHHHHHHHHhcChhhHHHHHHHh---cccccccccCCCCCCEEEEecCCCCccchhHHHHHH
Q 024033 161 WASSFPRLVVDTK-DAPSVEKFENCLKRMRHEFALPLAKTV---FYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQ 236 (273)
Q Consensus 161 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~ 236 (273)
+...+.. .+.. .+.....+.... . ............ ...+....++++++|+++++|++|..+|+...+.+.
T Consensus 168 ~~~~~~~--~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~~~~~ 243 (278)
T TIGR03056 168 VERLIRD--TGSLLDKAGMTYYGRLI-R-SPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDESKRAA 243 (278)
T ss_pred hhHHhhc--cccccccchhhHHHHhh-c-CchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCHHHHHHHH
Confidence 0000000 0000 000111111110 0 000000011111 111223457889999999999999999999889999
Q ss_pred HHcCCCeEEEEcCCCCCCCCccChHHHHHHHHHhhc
Q 024033 237 EKMKGKSTVEIIEADGHFPQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 237 ~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 272 (273)
+.+++ .++++++++||++++|+|+++++.|++|++
T Consensus 244 ~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 244 TRVPT-ATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred HhccC-CeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 88885 589999999999999999999999999985
No 19
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=100.00 E-value=7.4e-35 Score=253.12 Aligned_cols=246 Identities=16% Similarity=0.270 Sum_probs=159.7
Q ss_pred cccceEEecCCCceEEEecCCCCChh------------chhhhhh---hh-hcCceEEEEecCCCccccCCCCCCCCCCc
Q 024033 10 AAMNAKIIGSGKETLVLAHGFGGDQS------------IWDKITP---VL-SQHYRVLAFDWLFSGAILNKDHQSLYNPV 73 (273)
Q Consensus 10 ~~~~~~~~G~~~~~vvllHG~~~~~~------------~w~~~~~---~L-~~~~~via~D~~G~G~S~~~~~~~~~~~~ 73 (273)
..++|+..|++++|+|||||++++.. .|.++++ .| +++|+||++|+||||.|. +.
T Consensus 46 ~~l~y~~~G~~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~-~~-------- 116 (343)
T PRK08775 46 LRLRYELIGPAGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSL-DV-------- 116 (343)
T ss_pred ceEEEEEeccCCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCC-CC--------
Confidence 35788888964456888887776665 6898886 57 468999999999999872 21
Q ss_pred ccccHHHHHHHHHHHHHHcCCCce-EEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHH
Q 024033 74 KYSSYEAFADDLITLLEENDLKST-LFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLIS 152 (273)
Q Consensus 74 ~~~s~~~~a~~l~~~~~~~~~~~~-~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (273)
.|+ ++++++|+.+++++++++++ +||||||||+||+.+|.++|++|+++|++++.+....... .+ ....+...
T Consensus 117 ~~~-~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~~---~~--~~~~~~~~ 190 (343)
T PRK08775 117 PID-TADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYAA---AW--RALQRRAV 190 (343)
T ss_pred CCC-HHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHHH---HH--HHHHHHHH
Confidence 244 88999999999999999875 7999999999999999999999999999998653211000 00 00000000
Q ss_pred --------------HHH-------HhHHHHhccccccc--cCCCChhhHHHHH-----HHHHhcChhhHHHHHHHhcccc
Q 024033 153 --------------NVE-------TNYASWASSFPRLV--VDTKDAPSVEKFE-----NCLKRMRHEFALPLAKTVFYSD 204 (273)
Q Consensus 153 --------------~~~-------~~~~~~~~~~~~~~--~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 204 (273)
... .....+...|.... ...........+. .......+.....+......
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-- 268 (343)
T PRK08775 191 ALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESIDL-- 268 (343)
T ss_pred HcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHHhh--
Confidence 000 00000101111000 0000000111111 11111222222222222100
Q ss_pred cccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCCCeEEEEcCC-CCCCCCccChHHHHHHHHHhhc
Q 024033 205 EREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKGKSTVEIIEA-DGHFPQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 205 ~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~-~gH~~~~e~p~~~~~~i~~fl~ 272 (273)
....+.+|++|+++|+|++|.++|+...+.+.+.++..++++++++ +||++++|+|++|++.|++||+
T Consensus 269 ~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~ 337 (343)
T PRK08775 269 HRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILTTALR 337 (343)
T ss_pred cCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHHHHH
Confidence 1224688999999999999999998888888887732358999985 9999999999999999999985
No 20
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=100.00 E-value=6e-34 Score=253.32 Aligned_cols=247 Identities=19% Similarity=0.321 Sum_probs=161.2
Q ss_pred ccceEEecCC----CceEEEecCCCCChhchhh-hhhhhh----cCceEEEEecCCCccccCCCCCCCCCCcccccHHHH
Q 024033 11 AMNAKIIGSG----KETLVLAHGFGGDQSIWDK-ITPVLS----QHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAF 81 (273)
Q Consensus 11 ~~~~~~~G~~----~~~vvllHG~~~~~~~w~~-~~~~L~----~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~ 81 (273)
.++|...|+. +++|||+||++++...|.. +++.|+ .+|+|+++|+||||.|++|. ...|+ ++++
T Consensus 187 ~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~------~~~yt-l~~~ 259 (481)
T PLN03087 187 SLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPA------DSLYT-LREH 259 (481)
T ss_pred EEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCC------CCcCC-HHHH
Confidence 6788877742 4689999999999999985 557776 58999999999999996552 12355 9999
Q ss_pred HHHHH-HHHHHcCCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHH------
Q 024033 82 ADDLI-TLLEENDLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNV------ 154 (273)
Q Consensus 82 a~~l~-~~~~~~~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 154 (273)
++++. .+++++++++++|+||||||++++.+|.++|++|+++|+++++....+.. ... ........
T Consensus 260 a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~-----~~~--~~~~~~~~~~~~~~ 332 (481)
T PLN03087 260 LEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKG-----VQA--TQYVMRKVAPRRVW 332 (481)
T ss_pred HHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccc-----hhH--HHHHHHHhcccccC
Confidence 99995 89999999999999999999999999999999999999998743221110 000 00000000
Q ss_pred -----HHhHHHHhccccccc--cCCCChhhHHHH-------------HHHHHhcChhhHHHHHHHhc-------cccccc
Q 024033 155 -----ETNYASWASSFPRLV--VDTKDAPSVEKF-------------ENCLKRMRHEFALPLAKTVF-------YSDERE 207 (273)
Q Consensus 155 -----~~~~~~~~~~~~~~~--~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 207 (273)
......|........ .....+...+.+ .+................+. ......
T Consensus 333 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~ 412 (481)
T PLN03087 333 PPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDH 412 (481)
T ss_pred CccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHH
Confidence 000000100000000 000000000100 00000000000000000000 011222
Q ss_pred ccCCCCCCEEEEecCCCCccchhHHHHHHHHcCCCeEEEEcCCCCCCCCc-cChHHHHHHHHHhhc
Q 024033 208 ILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKGKSTVEIIEADGHFPQL-TAHLQLIDVLNKVLG 272 (273)
Q Consensus 208 ~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~ 272 (273)
.+++|++|+++|+|++|.++|++..+.+++.+|+ +++++|+++||++++ |+|+.|++.|++|..
T Consensus 413 l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~-a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~ 477 (481)
T PLN03087 413 VRDQLKCDVAIFHGGDDELIPVECSYAVKAKVPR-ARVKVIDDKDHITIVVGRQKEFARELEEIWR 477 (481)
T ss_pred HHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCCC-CEEEEeCCCCCcchhhcCHHHHHHHHHHHhh
Confidence 3457999999999999999999999999999996 699999999999996 999999999999964
No 21
>PRK07581 hypothetical protein; Validated
Probab=100.00 E-value=5e-34 Score=247.65 Aligned_cols=257 Identities=14% Similarity=0.154 Sum_probs=158.5
Q ss_pred cccceEEecC---CC-ceEEEecCCCCChhchhhhh---hhhh-cCceEEEEecCCCccccCCCCCCCCCCcccccHH--
Q 024033 10 AAMNAKIIGS---GK-ETLVLAHGFGGDQSIWDKIT---PVLS-QHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYE-- 79 (273)
Q Consensus 10 ~~~~~~~~G~---~~-~~vvllHG~~~~~~~w~~~~---~~L~-~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~-- 79 (273)
.+++|+..|+ ++ ++||++||++++...|..++ +.|. ++|+||++|+||||.|+.|... ...|+ ++
T Consensus 26 ~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~----~~~~~-~~~~ 100 (339)
T PRK07581 26 ARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNT----PAPFN-AARF 100 (339)
T ss_pred ceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCC----CCCCC-CCCC
Confidence 3578888885 23 45677777777777776554 5776 5899999999999999655310 01122 22
Q ss_pred ---HHHHHHHH----HHHHcCCCc-eEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccC---------------CC
Q 024033 80 ---AFADDLIT----LLEENDLKS-TLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYIN---------------TD 136 (273)
Q Consensus 80 ---~~a~~l~~----~~~~~~~~~-~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~---------------~~ 136 (273)
.+++++.+ +++++++++ ++||||||||+||+.+|.+||++|++||++++.+.... ..
T Consensus 101 ~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~ 180 (339)
T PRK07581 101 PHVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTADP 180 (339)
T ss_pred CceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCC
Confidence 24555544 778899999 58999999999999999999999999999987654210 00
Q ss_pred CCCCCCCh----hhHHHHHHHHHH--hHHHHhccccccccCCCC-hhhHHHHHHHH-HhcChhhHHHHHHHhc-------
Q 024033 137 DYEGGFEP----SDIENLISNVET--NYASWASSFPRLVVDTKD-APSVEKFENCL-KRMRHEFALPLAKTVF------- 201 (273)
Q Consensus 137 ~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~------- 201 (273)
.+..+... ..+......... ....+............. +.....+.+.. ...++.......+...
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 260 (339)
T PRK07581 181 AFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRN 260 (339)
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccC
Confidence 11100000 001110000000 000111000000000000 11111111111 1122222222221111
Q ss_pred ---ccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCCCeEEEEcCC-CCCCCCccChHHHHHHHHHhhc
Q 024033 202 ---YSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKGKSTVEIIEA-DGHFPQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 202 ---~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~-~gH~~~~e~p~~~~~~i~~fl~ 272 (273)
..+.+..+++|++||++|+|++|..+|+...+.+++.+++ ++++++++ +||++++|+|+.++..|++||.
T Consensus 261 ~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~-a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~ 334 (339)
T PRK07581 261 PAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIPN-AELRPIESIWGHLAGFGQNPADIAFIDAALK 334 (339)
T ss_pred cccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC-CeEEEeCCCCCccccccCcHHHHHHHHHHHH
Confidence 1245667889999999999999999999999999999986 58999998 9999999999999999999984
No 22
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=100.00 E-value=2.2e-33 Score=245.00 Aligned_cols=250 Identities=18% Similarity=0.224 Sum_probs=163.0
Q ss_pred ccceEEecC-CCceEEEecCCCCChhchhhhhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHH
Q 024033 11 AMNAKIIGS-GKETLVLAHGFGGDQSIWDKITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLL 89 (273)
Q Consensus 11 ~~~~~~~G~-~~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~ 89 (273)
+++|...|+ ++++||||||++++...|+++++.|+++|+|+++|+||||.|+.+... ....|+ ++++++++.+++
T Consensus 116 ~~~y~~~G~~~~~~ivllHG~~~~~~~w~~~~~~L~~~~~Via~DlpG~G~S~~p~~~---~~~~ys-~~~~a~~l~~~i 191 (383)
T PLN03084 116 RWFCVESGSNNNPPVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSDKPQPG---YGFNYT-LDEYVSSLESLI 191 (383)
T ss_pred EEEEEecCCCCCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCccc---ccccCC-HHHHHHHHHHHH
Confidence 346666685 357899999999999999999999999999999999999999665310 011355 999999999999
Q ss_pred HHcCCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHH------hHHHHhc
Q 024033 90 EENDLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVET------NYASWAS 163 (273)
Q Consensus 90 ~~~~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 163 (273)
+++++++++|+||||||++++.+|.++|++|+++|+++++... ... .. +..+..+...+.. .......
T Consensus 192 ~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~-~~~----~~-p~~l~~~~~~l~~~~~~~~~~~~~~~ 265 (383)
T PLN03084 192 DELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTK-EHA----KL-PSTLSEFSNFLLGEIFSQDPLRASDK 265 (383)
T ss_pred HHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCcc-ccc----cc-hHHHHHHHHHHhhhhhhcchHHHHhh
Confidence 9999999999999999999999999999999999999975321 000 00 0111111000000 0000000
Q ss_pred cccccccCCCChhhHHHHHHHHHhcCh-hhHH-HHHHHhcc------ccccccc--CCCCCCEEEEecCCCCccchhHHH
Q 024033 164 SFPRLVVDTKDAPSVEKFENCLKRMRH-EFAL-PLAKTVFY------SDEREIL--DKVETPCTIFQPSNDAVVPNSVAY 233 (273)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~------~~~~~~l--~~i~~P~lii~G~~D~~~~~~~~~ 233 (273)
.+.........++....+...+..... .... .+.+.+.. .+....+ .++++|+++|||++|.+++.+..+
T Consensus 266 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~ 345 (383)
T PLN03084 266 ALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVE 345 (383)
T ss_pred hhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHH
Confidence 000000000011111111111100000 0000 01111100 0111111 468999999999999999998888
Q ss_pred HHHHHcCCCeEEEEcCCCCCCCCccChHHHHHHHHHhhc
Q 024033 234 YMQEKMKGKSTVEIIEADGHFPQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 234 ~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 272 (273)
.+++.. + +++++|+++||++++|+|+++++.|.+|+.
T Consensus 346 ~~a~~~-~-a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 346 DFCKSS-Q-HKLIELPMAGHHVQEDCGEELGGIISGILS 382 (383)
T ss_pred HHHHhc-C-CeEEEECCCCCCcchhCHHHHHHHHHHHhh
Confidence 888764 3 589999999999999999999999999985
No 23
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=100.00 E-value=2.9e-33 Score=243.85 Aligned_cols=260 Identities=17% Similarity=0.260 Sum_probs=166.0
Q ss_pred cccceEEecC----CCceEEEecCCCCChh-----------chhhhh----hhhhcCceEEEEecCC--CccccCCC-C-
Q 024033 10 AAMNAKIIGS----GKETLVLAHGFGGDQS-----------IWDKIT----PVLSQHYRVLAFDWLF--SGAILNKD-H- 66 (273)
Q Consensus 10 ~~~~~~~~G~----~~~~vvllHG~~~~~~-----------~w~~~~----~~L~~~~~via~D~~G--~G~S~~~~-~- 66 (273)
..++|+.+|+ ++++|||+||+++++. .|+.++ +.+.++|+||++|+|| ||.| .+. .
T Consensus 16 ~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s-~~~~~~ 94 (351)
T TIGR01392 16 VRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGST-GPSSIN 94 (351)
T ss_pred ceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCC-CCCCCC
Confidence 4578998884 3568999999999763 488886 4446799999999999 5554 321 0
Q ss_pred -CC-CCC--CcccccHHHHHHHHHHHHHHcCCCc-eEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCC-----
Q 024033 67 -QS-LYN--PVKYSSYEAFADDLITLLEENDLKS-TLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTD----- 136 (273)
Q Consensus 67 -~~-~~~--~~~~~s~~~~a~~l~~~~~~~~~~~-~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~----- 136 (273)
.+ .+. ...|+ ++++++++.++++++++++ ++|+||||||++++.+|.++|++|+++|++++.+......
T Consensus 95 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 173 (351)
T TIGR01392 95 PGGRPYGSDFPLIT-IRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIAFNE 173 (351)
T ss_pred CCCCcCCCCCCCCc-HHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHHHHH
Confidence 00 010 11354 9999999999999999999 9999999999999999999999999999999875421100
Q ss_pred ----------CCCCC-CCh---h--hH--HHHHHHH-HHhHHHHhccccccccCCCCh-------hhHHHHH-----HHH
Q 024033 137 ----------DYEGG-FEP---S--DI--ENLISNV-ETNYASWASSFPRLVVDTKDA-------PSVEKFE-----NCL 185 (273)
Q Consensus 137 ----------~~~~~-~~~---~--~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-----~~~ 185 (273)
.+..+ +.. . .. .+..... ......+...|.........+ ...+.+. +..
T Consensus 174 ~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (351)
T TIGR01392 174 VQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQGDKFV 253 (351)
T ss_pred HHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHHHHHH
Confidence 00000 000 0 00 0000000 000001111121111000000 0111111 112
Q ss_pred HhcChhhHHHHHHHhcc-------cccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCCCeEEE-----EcCCCCC
Q 024033 186 KRMRHEFALPLAKTVFY-------SDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKGKSTVE-----IIEADGH 253 (273)
Q Consensus 186 ~~~~~~~~~~~~~~~~~-------~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~-----~i~~~gH 253 (273)
...+++........+.. .+.++.+++|++|+++|+|++|.++|+...+.+++.+++. +++ +++++||
T Consensus 254 ~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~-~~~v~~~~i~~~~GH 332 (351)
T TIGR01392 254 DRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPAA-GLRVTYVEIESPYGH 332 (351)
T ss_pred hhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhc-CCceEEEEeCCCCCc
Confidence 22233322222222222 2346788999999999999999999999999999999863 444 5678999
Q ss_pred CCCccChHHHHHHHHHhhc
Q 024033 254 FPQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 254 ~~~~e~p~~~~~~i~~fl~ 272 (273)
++++|+|++|++.|.+||.
T Consensus 333 ~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 333 DAFLVETDQVEELIRGFLR 351 (351)
T ss_pred chhhcCHHHHHHHHHHHhC
Confidence 9999999999999999984
No 24
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=100.00 E-value=6e-33 Score=243.92 Aligned_cols=261 Identities=16% Similarity=0.277 Sum_probs=166.1
Q ss_pred ccceEEecC----CCceEEEecCCCCChhc-------------hhhhh----hhhhcCceEEEEecCCC-ccccCCCCCC
Q 024033 11 AMNAKIIGS----GKETLVLAHGFGGDQSI-------------WDKIT----PVLSQHYRVLAFDWLFS-GAILNKDHQS 68 (273)
Q Consensus 11 ~~~~~~~G~----~~~~vvllHG~~~~~~~-------------w~~~~----~~L~~~~~via~D~~G~-G~S~~~~~~~ 68 (273)
+++|+.+|. ++|+|||+||++++... |+.++ +.+.++|+||++|++|+ |.|+.|....
T Consensus 34 ~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~ 113 (379)
T PRK00175 34 ELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSIN 113 (379)
T ss_pred eEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCC
Confidence 468888885 25789999999999874 77776 44477999999999994 5553432100
Q ss_pred -----CC--CCcccccHHHHHHHHHHHHHHcCCCc-eEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCC----
Q 024033 69 -----LY--NPVKYSSYEAFADDLITLLEENDLKS-TLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTD---- 136 (273)
Q Consensus 69 -----~~--~~~~~~s~~~~a~~l~~~~~~~~~~~-~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~---- 136 (273)
.+ +...|+ ++++++++.++++++++++ ++|+||||||++++.+|.++|++|+++|++++.+......
T Consensus 114 ~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 192 (379)
T PRK00175 114 PDTGKPYGSDFPVIT-IRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQNIAFN 192 (379)
T ss_pred CCCCCcccCCCCcCC-HHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHHHHHH
Confidence 00 001455 9999999999999999999 4999999999999999999999999999999865421100
Q ss_pred -----------CCCCC-CC---hhhHHHH-HHH----H-HHhHHHHhccccccccCCC------ChhhHHHHHH-----H
Q 024033 137 -----------DYEGG-FE---PSDIENL-ISN----V-ETNYASWASSFPRLVVDTK------DAPSVEKFEN-----C 184 (273)
Q Consensus 137 -----------~~~~~-~~---~~~~~~~-~~~----~-~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~-----~ 184 (273)
.|..+ +. ....... ... . ..........|........ .....+.+.. .
T Consensus 193 ~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 272 (379)
T PRK00175 193 EVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQGDKF 272 (379)
T ss_pred HHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHHHHHH
Confidence 00000 00 0000000 000 0 0000001111111100000 0001111111 1
Q ss_pred HHhcChhhHHHHHHHhcc--------cccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCCC---eEEEEcC-CCC
Q 024033 185 LKRMRHEFALPLAKTVFY--------SDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKGK---STVEIIE-ADG 252 (273)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~--------~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~---~~~~~i~-~~g 252 (273)
....+++......+.+.. .+.++.+++|++|+++|+|++|.++|++..+.+++.+++. +++++++ ++|
T Consensus 273 ~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~G 352 (379)
T PRK00175 273 VERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDSPYG 352 (379)
T ss_pred hhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCC
Confidence 112233322222222211 2356788999999999999999999999999999999853 2566664 899
Q ss_pred CCCCccChHHHHHHHHHhhc
Q 024033 253 HFPQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 253 H~~~~e~p~~~~~~i~~fl~ 272 (273)
|++++|+|++|++.|.+||+
T Consensus 353 H~~~le~p~~~~~~L~~FL~ 372 (379)
T PRK00175 353 HDAFLLDDPRYGRLVRAFLE 372 (379)
T ss_pred chhHhcCHHHHHHHHHHHHH
Confidence 99999999999999999985
No 25
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=7.3e-33 Score=241.23 Aligned_cols=248 Identities=17% Similarity=0.229 Sum_probs=157.5
Q ss_pred cceEEecC----CCceEEEecCCCCChhc-hhhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHH
Q 024033 12 MNAKIIGS----GKETLVLAHGFGGDQSI-WDKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDL 85 (273)
Q Consensus 12 ~~~~~~G~----~~~~vvllHG~~~~~~~-w~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l 85 (273)
+++..+++ .+++|||+||++++... |+.+.+.|.+ +|+|+++|+||||.|+.+. .+ ..+++++++|+
T Consensus 74 l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~---~~----~~~~~~~~~dv 146 (349)
T PLN02385 74 IFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLH---GY----IPSFDDLVDDV 146 (349)
T ss_pred EEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCC---CC----cCCHHHHHHHH
Confidence 44445542 34679999999988765 6889999986 8999999999999995432 01 12599999999
Q ss_pred HHHHHHcCCC------ceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHH
Q 024033 86 ITLLEENDLK------STLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYA 159 (273)
Q Consensus 86 ~~~~~~~~~~------~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (273)
.++++.+..+ +++|+||||||+|++.++.++|++|+++|++++....... . .....+......+.....
T Consensus 147 ~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~--~---~~~~~~~~~~~~~~~~~p 221 (349)
T PLN02385 147 IEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADD--V---VPPPLVLQILILLANLLP 221 (349)
T ss_pred HHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEeccccccccc--c---cCchHHHHHHHHHHHHCC
Confidence 9999877542 6999999999999999999999999999999875432110 0 011111111111111000
Q ss_pred HHhcccccc-ccCCCC-hhhHHHHHHH-HHhcC-hhhHHHHHHHhc-ccccccccCCCCCCEEEEecCCCCccchhHHHH
Q 024033 160 SWASSFPRL-VVDTKD-APSVEKFENC-LKRMR-HEFALPLAKTVF-YSDEREILDKVETPCTIFQPSNDAVVPNSVAYY 234 (273)
Q Consensus 160 ~~~~~~~~~-~~~~~~-~~~~~~~~~~-~~~~~-~~~~~~~~~~~~-~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~ 234 (273)
.+. .+... ...... ........+. ..... ..........+. ..+....+.++++|+++|+|++|.++|+...+.
T Consensus 222 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~ 300 (349)
T PLN02385 222 KAK-LVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDPSVSKF 300 (349)
T ss_pred Cce-ecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccChHHHHH
Confidence 000 00000 000000 0000010000 00000 000111111111 123455688999999999999999999999999
Q ss_pred HHHHcCC-CeEEEEcCCCCCCCCccChHH----HHHHHHHhhc
Q 024033 235 MQEKMKG-KSTVEIIEADGHFPQLTAHLQ----LIDVLNKVLG 272 (273)
Q Consensus 235 ~~~~~~~-~~~~~~i~~~gH~~~~e~p~~----~~~~i~~fl~ 272 (273)
+.+.++. .+++++|+++||+++.|+|++ +.+.|.+||+
T Consensus 301 l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~ 343 (349)
T PLN02385 301 LYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLD 343 (349)
T ss_pred HHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHH
Confidence 9888742 368999999999999999987 7777888874
No 26
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=100.00 E-value=6.2e-33 Score=224.97 Aligned_cols=226 Identities=27% Similarity=0.469 Sum_probs=153.4
Q ss_pred EEEecCCCCChhchhhhhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCCCceEEEEEC
Q 024033 24 LVLAHGFGGDQSIWDKITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDLKSTLFIGHS 103 (273)
Q Consensus 24 vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~~~~~lvGhS 103 (273)
|||+||++++...|.++++.|+++|+|+++|+||||.|+.+. +...+ +++++++++.+++++++.++++|+|||
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~-----~~~~~-~~~~~~~~l~~~l~~~~~~~~~lvG~S 74 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALARGYRVIAFDLPGHGRSDPPP-----DYSPY-SIEDYAEDLAELLDALGIKKVILVGHS 74 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHHTTSEEEEEECTTSTTSSSHS-----SGSGG-SHHHHHHHHHHHHHHTTTSSEEEEEET
T ss_pred eEEECCCCCCHHHHHHHHHHHhCCCEEEEEecCCcccccccc-----ccCCc-chhhhhhhhhhcccccccccccccccc
Confidence 799999999999999999999889999999999999995432 11124 499999999999999999999999999
Q ss_pred hhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHHhc-cccccccCCCChhhHHHHH
Q 024033 104 MSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASWAS-SFPRLVVDTKDAPSVEKFE 182 (273)
Q Consensus 104 ~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 182 (273)
+||.+++.++.++|++|+++|++++......... .......+..+..........+.. .+.... .......+.
T Consensus 75 ~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 148 (228)
T PF12697_consen 75 MGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPS--RSFGPSFIRRLLAWRSRSLRRLASRFFYRWF----DGDEPEDLI 148 (228)
T ss_dssp HHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----THHHHHHHH
T ss_pred cccccccccccccccccccceeeccccccccccc--ccccchhhhhhhhcccccccccccccccccc----ccccccccc
Confidence 9999999999999999999999997653210000 000000111111110000001100 000000 001111111
Q ss_pred HHHHhcChhhHHHHHHH-hcccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCCCeEEEEcCCCCCCCCccChH
Q 024033 183 NCLKRMRHEFALPLAKT-VFYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKGKSTVEIIEADGHFPQLTAHL 261 (273)
Q Consensus 183 ~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~ 261 (273)
+. .........+. ....+....++++++|+++++|++|.+++.+..+.+.+..++ +++++++++||++++|+|+
T Consensus 149 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~p~ 223 (228)
T PF12697_consen 149 RS----SRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLPN-AELVVIPGAGHFLFLEQPD 223 (228)
T ss_dssp HH----HHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHSTT-EEEEEETTSSSTHHHHSHH
T ss_pred cc----cccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCCC-CEEEEECCCCCccHHHCHH
Confidence 10 00111111111 122345567788899999999999999999899999988885 6999999999999999999
Q ss_pred HHHHH
Q 024033 262 QLIDV 266 (273)
Q Consensus 262 ~~~~~ 266 (273)
+|+++
T Consensus 224 ~~~~a 228 (228)
T PF12697_consen 224 EVAEA 228 (228)
T ss_dssp HHHHH
T ss_pred HHhcC
Confidence 99874
No 27
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=100.00 E-value=1e-32 Score=235.92 Aligned_cols=239 Identities=22% Similarity=0.314 Sum_probs=157.9
Q ss_pred CCceEEEecCCCCChhchhhhhhhhhcC--ceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCCCce
Q 024033 20 GKETLVLAHGFGGDQSIWDKITPVLSQH--YRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDLKST 97 (273)
Q Consensus 20 ~~~~vvllHG~~~~~~~w~~~~~~L~~~--~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~~~~ 97 (273)
.+++|||+|||+++...|+.+++.|.+. ++|.|+|++|||.|+... ....|+ ..++++.+..++.+...+++
T Consensus 57 ~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~-----~~~~y~-~~~~v~~i~~~~~~~~~~~~ 130 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLP-----RGPLYT-LRELVELIRRFVKEVFVEPV 130 (326)
T ss_pred CCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCC-----CCCcee-hhHHHHHHHHHHHhhcCcce
Confidence 3679999999999999999999999997 999999999999664322 112376 99999999999999999999
Q ss_pred EEEEEChhHHHHHHHHhhCcccccceEEee---cCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHHhcc---cccc---
Q 024033 98 LFIGHSMSGMIGCIASVKKPELFKRLILIG---TSPRYINTDDYEGGFEPSDIENLISNVETNYASWASS---FPRL--- 168 (273)
Q Consensus 98 ~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--- 168 (273)
+|+||||||++|..+|+.+|+.|+++++++ +.....+.. . ......++.... ..+.+... +...
T Consensus 131 ~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~ 203 (326)
T KOG1454|consen 131 SLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKG--I-KGLRRLLDKFLS----ALELLIPLSLTEPVRLVS 203 (326)
T ss_pred EEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcc--h-hHHHHhhhhhcc----HhhhcCccccccchhhee
Confidence 999999999999999999999999999555 322111100 0 000011111111 11111100 0000
Q ss_pred --------ccCCCChhhHHHHHHHHHhc-----ChhhHHHHHHHhcc--cccccccCCCC-CCEEEEecCCCCccchhHH
Q 024033 169 --------VVDTKDAPSVEKFENCLKRM-----RHEFALPLAKTVFY--SDEREILDKVE-TPCTIFQPSNDAVVPNSVA 232 (273)
Q Consensus 169 --------~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~--~~~~~~l~~i~-~P~lii~G~~D~~~~~~~~ 232 (273)
....+.....+......... ..+....+...... ......++++. ||++++||+.|+++|.+.+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~ 283 (326)
T KOG1454|consen 204 EGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELA 283 (326)
T ss_pred HhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHH
Confidence 00000000111111110000 00000001011111 22333566776 9999999999999999999
Q ss_pred HHHHHHcCCCeEEEEcCCCCCCCCccChHHHHHHHHHhhc
Q 024033 233 YYMQEKMKGKSTVEIIEADGHFPQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 233 ~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 272 (273)
..+.+.+++ .++++|+++||.+++|+|+++++.|..|+.
T Consensus 284 ~~~~~~~pn-~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~ 322 (326)
T KOG1454|consen 284 EELKKKLPN-AELVEIPGAGHLPHLERPEEVAALLRSFIA 322 (326)
T ss_pred HHHHhhCCC-ceEEEeCCCCcccccCCHHHHHHHHHHHHH
Confidence 999998875 699999999999999999999999999985
No 28
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=100.00 E-value=3.8e-32 Score=225.07 Aligned_cols=246 Identities=18% Similarity=0.224 Sum_probs=157.8
Q ss_pred CCCceEEEecCCCCChhchhhhhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCCCceE
Q 024033 19 SGKETLVLAHGFGGDQSIWDKITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDLKSTL 98 (273)
Q Consensus 19 ~~~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~~~~~ 98 (273)
..++|+|||||+|.....|....+.|++.++|+|+|++|+|.|++|... ...-+..+.+++-+.+...+.++++.+
T Consensus 88 ~~~~plVliHGyGAg~g~f~~Nf~~La~~~~vyaiDllG~G~SSRP~F~----~d~~~~e~~fvesiE~WR~~~~L~Kmi 163 (365)
T KOG4409|consen 88 ANKTPLVLIHGYGAGLGLFFRNFDDLAKIRNVYAIDLLGFGRSSRPKFS----IDPTTAEKEFVESIEQWRKKMGLEKMI 163 (365)
T ss_pred cCCCcEEEEeccchhHHHHHHhhhhhhhcCceEEecccCCCCCCCCCCC----CCcccchHHHHHHHHHHHHHcCCccee
Confidence 3567899999999999999999999999999999999999999998632 222223668999999999999999999
Q ss_pred EEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCC-CCCCCC--hhhHHHHHHHHHHhH-----HHHhcccccccc
Q 024033 99 FIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDD-YEGGFE--PSDIENLISNVETNY-----ASWASSFPRLVV 170 (273)
Q Consensus 99 lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 170 (273)
|+||||||++|..+|.+||++|++|||+++.... ... ....+. +..+-.........+ -.|.--+.+.++
T Consensus 164 lvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~--~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv 241 (365)
T KOG4409|consen 164 LVGHSFGGYLAAKYALKYPERVEKLILVSPWGFP--EKPDSEPEFTKPPPEWYKALFLVATNFNPLALLRLMGPLGPKLV 241 (365)
T ss_pred EeeccchHHHHHHHHHhChHhhceEEEecccccc--cCCCcchhhcCCChHHHhhhhhhhhcCCHHHHHHhccccchHHH
Confidence 9999999999999999999999999999974321 111 000000 011100000000000 000000000000
Q ss_pred CC-------CChh-hHHHH-HHHHH---hcChhhHHHHHHHhccc------ccccccCCCC--CCEEEEecCCCCccchh
Q 024033 171 DT-------KDAP-SVEKF-ENCLK---RMRHEFALPLAKTVFYS------DEREILDKVE--TPCTIFQPSNDAVVPNS 230 (273)
Q Consensus 171 ~~-------~~~~-~~~~~-~~~~~---~~~~~~~~~~~~~~~~~------~~~~~l~~i~--~P~lii~G~~D~~~~~~ 230 (273)
.. ..+. ..+++ .+-+. ..++ ........++.+ -+.+++..++ ||+++|+|++| +++..
T Consensus 242 ~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~p-sgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~d-WmD~~ 319 (365)
T KOG4409|consen 242 SRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNP-SGETAFKNLFEPGGWARRPMIQRLRELKKDVPVTFIYGDRD-WMDKN 319 (365)
T ss_pred hhhhHHHHHhccccchhHHHHHHHHHhcCCCC-cHHHHHHHHHhccchhhhhHHHHHHhhccCCCEEEEecCcc-cccch
Confidence 00 0000 01111 11111 1222 222222222211 1233444454 99999999999 56676
Q ss_pred HHHHHHHHcCC-CeEEEEcCCCCCCCCccChHHHHHHHHHhhc
Q 024033 231 VAYYMQEKMKG-KSTVEIIEADGHFPQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 231 ~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 272 (273)
...++.+.+.. .++.++|++|||.+.+++|+.|++.+.+++.
T Consensus 320 ~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~ 362 (365)
T KOG4409|consen 320 AGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECD 362 (365)
T ss_pred hHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHh
Confidence 77777664332 3689999999999999999999999999874
No 29
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=100.00 E-value=1.1e-31 Score=220.70 Aligned_cols=240 Identities=22% Similarity=0.298 Sum_probs=157.2
Q ss_pred ceEEEecCCCCChhchhhhhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHH-HHHHHHHcCCCceEEE
Q 024033 22 ETLVLAHGFGGDQSIWDKITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADD-LITLLEENDLKSTLFI 100 (273)
Q Consensus 22 ~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~-l~~~~~~~~~~~~~lv 100 (273)
|+|||+||++++...|.++.+.|.++|+|+++|+||||.|+.+. ....+ ++++++++ +..+++.++.++++++
T Consensus 2 ~~vv~~hG~~~~~~~~~~~~~~L~~~~~v~~~d~~g~G~s~~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~ 75 (251)
T TIGR03695 2 PVLVFLHGFLGSGADWQALIELLGPHFRCLAIDLPGHGSSQSPD-----EIERY-DFEEAAQDILATLLDQLGIEPFFLV 75 (251)
T ss_pred CEEEEEcCCCCchhhHHHHHHHhcccCeEEEEcCCCCCCCCCCC-----ccChh-hHHHHHHHHHHHHHHHcCCCeEEEE
Confidence 68999999999999999999999989999999999999996542 11123 49999999 7788898888999999
Q ss_pred EEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCC-ChhhHHHHHHH--HHHhHHHHhccccccccCC---CC
Q 024033 101 GHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGF-EPSDIENLISN--VETNYASWASSFPRLVVDT---KD 174 (273)
Q Consensus 101 GhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~ 174 (273)
||||||.+++.+|.++|++|++++++++.+............ ........+.. .......|.. ...... ..
T Consensus 76 G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 152 (251)
T TIGR03695 76 GYSMGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQ---QPLFASQKNLP 152 (251)
T ss_pred EeccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhc---CceeeecccCC
Confidence 999999999999999999999999998765432110000000 00000000000 0000011111 000000 01
Q ss_pred hhhHHHHHHHHHhcChhhHHHHHHHh---cccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCCCeEEEEcCCC
Q 024033 175 APSVEKFENCLKRMRHEFALPLAKTV---FYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKGKSTVEIIEAD 251 (273)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~ 251 (273)
+...+.+........+.......... ...+....+.++++|+++++|++|..++ ...+.+.+..++ .++++++++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~-~~~~~~~~~ 230 (251)
T TIGR03695 153 PEQRQALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLLPN-LTLVIIANA 230 (251)
T ss_pred hHHhHHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcCCC-CcEEEEcCC
Confidence 11111121111111111111111111 1223445578899999999999998764 556677777775 589999999
Q ss_pred CCCCCccChHHHHHHHHHhhc
Q 024033 252 GHFPQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 252 gH~~~~e~p~~~~~~i~~fl~ 272 (273)
||++++|+|+++++.|.+|++
T Consensus 231 gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 231 GHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred CCCcCccChHHHHHHHHHHhC
Confidence 999999999999999999984
No 30
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=100.00 E-value=1.3e-31 Score=225.45 Aligned_cols=234 Identities=19% Similarity=0.246 Sum_probs=152.7
Q ss_pred CCCceEEEecCCCCChhchhhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcC-CCc
Q 024033 19 SGKETLVLAHGFGGDQSIWDKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEEND-LKS 96 (273)
Q Consensus 19 ~~~~~vvllHG~~~~~~~w~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~-~~~ 96 (273)
+.+|+|||+||++.++..|.++.+.|.+ +|+|+++|+||||.|.... ....+++++++++.+++++++ .++
T Consensus 16 ~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~-------~~~~~~~~~~~~l~~~i~~l~~~~~ 88 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDA-------DSVTTFDEYNKPLIDFLSSLPENEK 88 (273)
T ss_pred CCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCc-------ccCCCHHHHHHHHHHHHHhcCCCCC
Confidence 3457899999999999999999999986 8999999999999873211 112359999999999999985 579
Q ss_pred eEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHHhcc----ccccccCC
Q 024033 97 TLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASWASS----FPRLVVDT 172 (273)
Q Consensus 97 ~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 172 (273)
++||||||||++++.++.++|++|+++|++++.... . ++... ..+....... ..+... +.......
T Consensus 89 v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~---~----g~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 158 (273)
T PLN02211 89 VILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLK---L----GFQTD--EDMKDGVPDL-SEFGDVYELGFGLGPDQP 158 (273)
T ss_pred EEEEEECchHHHHHHHHHhChhheeEEEEeccccCC---C----CCCHH--HHHhccccch-hhhccceeeeeccCCCCC
Confidence 999999999999999999999999999999874321 0 11110 0000000000 000000 00000000
Q ss_pred CCh-hhHHHHHHH-HHhcChhhHHHHHH---------HhcccccccccCCC-CCCEEEEecCCCCccchhHHHHHHHHcC
Q 024033 173 KDA-PSVEKFENC-LKRMRHEFALPLAK---------TVFYSDEREILDKV-ETPCTIFQPSNDAVVPNSVAYYMQEKMK 240 (273)
Q Consensus 173 ~~~-~~~~~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~~~l~~i-~~P~lii~G~~D~~~~~~~~~~~~~~~~ 240 (273)
... ....++... +....+........ .+...+.......+ ++|+++|+|++|.++|++.++.|++.++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~ 238 (273)
T PLN02211 159 PTSAIIKKEFRRKILYQMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWP 238 (273)
T ss_pred CceeeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhCC
Confidence 000 000111111 11111110000000 01111222233455 8999999999999999999999999988
Q ss_pred CCeEEEEcCCCCCCCCccChHHHHHHHHHhh
Q 024033 241 GKSTVEIIEADGHFPQLTAHLQLIDVLNKVL 271 (273)
Q Consensus 241 ~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 271 (273)
+. +++.++ +||++++++|+++++.|.++.
T Consensus 239 ~~-~~~~l~-~gH~p~ls~P~~~~~~i~~~a 267 (273)
T PLN02211 239 PS-QVYELE-SDHSPFFSTPFLLFGLLIKAA 267 (273)
T ss_pred cc-EEEEEC-CCCCccccCHHHHHHHHHHHH
Confidence 64 888896 899999999999999998865
No 31
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=5.3e-31 Score=232.75 Aligned_cols=249 Identities=18% Similarity=0.224 Sum_probs=152.8
Q ss_pred CCceEEEecCCCCChhchhhhhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCCCceEE
Q 024033 20 GKETLVLAHGFGGDQSIWDKITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDLKSTLF 99 (273)
Q Consensus 20 ~~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~~~~~l 99 (273)
++|+|||+||++++...|.++++.|+++|+|+++|+||||.|+++... +.. .....+.+++++.++++.+++++++|
T Consensus 104 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~D~rG~G~S~~~~~~--~~~-~~~~~~~~~~~i~~~~~~l~~~~~~l 180 (402)
T PLN02894 104 DAPTLVMVHGYGASQGFFFRNFDALASRFRVIAIDQLGWGGSSRPDFT--CKS-TEETEAWFIDSFEEWRKAKNLSNFIL 180 (402)
T ss_pred CCCEEEEECCCCcchhHHHHHHHHHHhCCEEEEECCCCCCCCCCCCcc--ccc-HHHHHHHHHHHHHHHHHHcCCCCeEE
Confidence 347899999999999999999999999999999999999999655310 000 01112346788889999999999999
Q ss_pred EEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCC--hhhHHH-HHHHH----------HH--------hH
Q 024033 100 IGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFE--PSDIEN-LISNV----------ET--------NY 158 (273)
Q Consensus 100 vGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~----------~~--------~~ 158 (273)
+||||||++++.+|.++|++|+++|++++.............+. ...+.. +.... .. ..
T Consensus 181 vGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gp~~~~l~ 260 (402)
T PLN02894 181 LGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLGPWGPNLV 260 (402)
T ss_pred EEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhccchhHHHH
Confidence 99999999999999999999999999987542211111000000 000000 00000 00 00
Q ss_pred HHHh-ccccccc----cCCCChhhHHHHHHHHHhcChhh--HHHHHH---HhcccccccccCCCCCCEEEEecCCCCccc
Q 024033 159 ASWA-SSFPRLV----VDTKDAPSVEKFENCLKRMRHEF--ALPLAK---TVFYSDEREILDKVETPCTIFQPSNDAVVP 228 (273)
Q Consensus 159 ~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~~~~l~~i~~P~lii~G~~D~~~~ 228 (273)
..+. ..|.... ...........+........+.. ...... .....+....+.+|++|+++|+|++|.+.+
T Consensus 261 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI~G~~D~i~~ 340 (402)
T PLN02894 261 RRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFIYGRHDWMNY 340 (402)
T ss_pred HHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEEEeCCCCCCc
Confidence 0000 0010000 00000001111111111111111 011110 011234556688999999999999998765
Q ss_pred hhHHHHHHHHcCCCeEEEEcCCCCCCCCccChHHHHHHHHHhhc
Q 024033 229 NSVAYYMQEKMKGKSTVEIIEADGHFPQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 272 (273)
.....+.+..+..+++++|+++||++++|+|++|++.|.+|++
T Consensus 341 -~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~ 383 (402)
T PLN02894 341 -EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACR 383 (402)
T ss_pred -HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHH
Confidence 4454555555433589999999999999999999999998874
No 32
>PRK10749 lysophospholipase L2; Provisional
Probab=99.98 E-value=1.3e-30 Score=225.32 Aligned_cols=252 Identities=13% Similarity=0.129 Sum_probs=160.2
Q ss_pred ccceEEecC--CCceEEEecCCCCChhchhhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHH
Q 024033 11 AMNAKIIGS--GKETLVLAHGFGGDQSIWDKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLIT 87 (273)
Q Consensus 11 ~~~~~~~G~--~~~~vvllHG~~~~~~~w~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~ 87 (273)
.++|..+|. ++++|||+||++++...|..++..|.+ +|+|+++|+||||.|+.+... .......+++++++|+..
T Consensus 42 ~l~~~~~~~~~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~--~~~~~~~~~~~~~~d~~~ 119 (330)
T PRK10749 42 PIRFVRFRAPHHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDD--PHRGHVERFNDYVDDLAA 119 (330)
T ss_pred EEEEEEccCCCCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCC--CCcCccccHHHHHHHHHH
Confidence 467777663 456899999999999999999987765 899999999999999643210 001112359999999999
Q ss_pred HHHHc----CCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHHhc
Q 024033 88 LLEEN----DLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASWAS 163 (273)
Q Consensus 88 ~~~~~----~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (273)
+++.+ +..+++|+||||||++++.+|.++|++|+++|++++....... ................ .....
T Consensus 120 ~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~------~~~~~~~~~~~~~~~~-~~~~~ 192 (330)
T PRK10749 120 FWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLP------LPSWMARRILNWAEGH-PRIRD 192 (330)
T ss_pred HHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCC------CCcHHHHHHHHHHHHh-cCCCC
Confidence 99876 6678999999999999999999999999999999765322100 0011111111111000 00000
Q ss_pred -------ccccccc--C--CCChhhHHHHHHHHHhcChhh-----HHHHHHHhc--ccccccccCCCCCCEEEEecCCCC
Q 024033 164 -------SFPRLVV--D--TKDAPSVEKFENCLKRMRHEF-----ALPLAKTVF--YSDEREILDKVETPCTIFQPSNDA 225 (273)
Q Consensus 164 -------~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~--~~~~~~~l~~i~~P~lii~G~~D~ 225 (273)
.+..... . ...+...+.+.+.... ++.. ......... ..+....+.++++|+|+|+|++|.
T Consensus 193 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~ 271 (330)
T PRK10749 193 GYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYAD-DPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLLLLQAEEER 271 (330)
T ss_pred cCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHh-CCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEEEEEeCCCe
Confidence 0000000 0 0011111222222221 2211 111111111 112345678899999999999999
Q ss_pred ccchhHHHHHHHHcCC------CeEEEEcCCCCCCCCccCh---HHHHHHHHHhhc
Q 024033 226 VVPNSVAYYMQEKMKG------KSTVEIIEADGHFPQLTAH---LQLIDVLNKVLG 272 (273)
Q Consensus 226 ~~~~~~~~~~~~~~~~------~~~~~~i~~~gH~~~~e~p---~~~~~~i~~fl~ 272 (273)
++++...+.+++.++. .+++++++++||.++.|.+ +.+.+.|.+||+
T Consensus 272 vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~ 327 (330)
T PRK10749 272 VVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFN 327 (330)
T ss_pred eeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHh
Confidence 9999988888876631 2479999999999999998 456666777764
No 33
>PHA02857 monoglyceride lipase; Provisional
Probab=99.98 E-value=7.4e-31 Score=221.37 Aligned_cols=243 Identities=16% Similarity=0.255 Sum_probs=152.4
Q ss_pred ccceEEecC---CCceEEEecCCCCChhchhhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHH
Q 024033 11 AMNAKIIGS---GKETLVLAHGFGGDQSIWDKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLI 86 (273)
Q Consensus 11 ~~~~~~~G~---~~~~vvllHG~~~~~~~w~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~ 86 (273)
.++++.+-+ .++.|+|+||+++++..|..+++.|.+ +|+|+++|+||||.|+... . ...++..+++|+.
T Consensus 12 ~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~----~---~~~~~~~~~~d~~ 84 (276)
T PHA02857 12 YIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEK----M---MIDDFGVYVRDVV 84 (276)
T ss_pred EEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCcc----C---CcCCHHHHHHHHH
Confidence 455554422 234566679999999999999999987 7999999999999994321 1 1234777788888
Q ss_pred HHHHHc----CCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHHh
Q 024033 87 TLLEEN----DLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASWA 162 (273)
Q Consensus 87 ~~~~~~----~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (273)
+.++.+ ..++++|+||||||++++.+|.++|++++++|++++... .+. .... ......... .+.
T Consensus 85 ~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~---~~~----~~~~--~~~~~~~~~---~~~ 152 (276)
T PHA02857 85 QHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVN---AEA----VPRL--NLLAAKLMG---IFY 152 (276)
T ss_pred HHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccc---ccc----ccHH--HHHHHHHHH---HhC
Confidence 777653 446899999999999999999999999999999986432 110 0000 100000000 000
Q ss_pred cc-ccccccCCCChhhHHHHHHHHHh---cChhhHHHHHHHh--cccccccccCCCCCCEEEEecCCCCccchhHHHHHH
Q 024033 163 SS-FPRLVVDTKDAPSVEKFENCLKR---MRHEFALPLAKTV--FYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQ 236 (273)
Q Consensus 163 ~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~ 236 (273)
.. ...............+....... ........+.... ...+..+.+.++++|+++|+|++|.++|++.++.+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~ 232 (276)
T PHA02857 153 PNKIVGKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFM 232 (276)
T ss_pred CCCccCCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHH
Confidence 00 00000000000000111100000 0000000011111 112345668899999999999999999999999998
Q ss_pred HHcCCCeEEEEcCCCCCCCCccChH---HHHHHHHHhhc
Q 024033 237 EKMKGKSTVEIIEADGHFPQLTAHL---QLIDVLNKVLG 272 (273)
Q Consensus 237 ~~~~~~~~~~~i~~~gH~~~~e~p~---~~~~~i~~fl~ 272 (273)
+.++..+++++++++||+++.|+++ ++.+.|.+||+
T Consensus 233 ~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~ 271 (276)
T PHA02857 233 QHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIF 271 (276)
T ss_pred HHccCCceEEEeCCCcccccCCchhHHHHHHHHHHHHHH
Confidence 8875346899999999999999884 56677777763
No 34
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.97 E-value=9.7e-31 Score=262.66 Aligned_cols=256 Identities=18% Similarity=0.190 Sum_probs=166.1
Q ss_pred cceEEecC--CCceEEEecCCCCChhchhhhhhhhhcCceEEEEecCCCccccCCCCCCCC-CCcccccHHHHHHHHHHH
Q 024033 12 MNAKIIGS--GKETLVLAHGFGGDQSIWDKITPVLSQHYRVLAFDWLFSGAILNKDHQSLY-NPVKYSSYEAFADDLITL 88 (273)
Q Consensus 12 ~~~~~~G~--~~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~-~~~~~~s~~~~a~~l~~~ 88 (273)
++|+..|+ ++++|||+||++++...|.++...|+++|+|+++|+||||.|+.+...... ....+ +++.+++++.++
T Consensus 1360 i~~~~~G~~~~~~~vVllHG~~~s~~~w~~~~~~L~~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~-si~~~a~~l~~l 1438 (1655)
T PLN02980 1360 IKVHEVGQNAEGSVVLFLHGFLGTGEDWIPIMKAISGSARCISIDLPGHGGSKIQNHAKETQTEPTL-SVELVADLLYKL 1438 (1655)
T ss_pred EEEEecCCCCCCCeEEEECCCCCCHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCccccccccccccC-CHHHHHHHHHHH
Confidence 45555564 357899999999999999999999999999999999999999543210000 01124 499999999999
Q ss_pred HHHcCCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCC-hhhHHHHHH--HHHHhHHHHhccc
Q 024033 89 LEENDLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFE-PSDIENLIS--NVETNYASWASSF 165 (273)
Q Consensus 89 ~~~~~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~ 165 (273)
++++++++++|+||||||++++.++.++|++|+++|++++.+............. ......... ........|..
T Consensus 1439 l~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~-- 1516 (1655)
T PLN02980 1439 IEHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYS-- 1516 (1655)
T ss_pred HHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhcc--
Confidence 9999999999999999999999999999999999999987654311100000000 000000000 00001111111
Q ss_pred cccccC-C-CChhhHHHHHHHHHhcChhhHHHHHHHh---cccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcC
Q 024033 166 PRLVVD-T-KDAPSVEKFENCLKRMRHEFALPLAKTV---FYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMK 240 (273)
Q Consensus 166 ~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~ 240 (273)
..... . ..+...+.+...+..............+ ...+.++.+++|++|+++|+|++|..++ ...+.+.+.++
T Consensus 1517 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~ 1594 (1655)
T PLN02980 1517 -GELWKSLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIG 1594 (1655)
T ss_pred -HHHhhhhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHcc
Confidence 00000 0 0011111111111111111111111111 1234556789999999999999999875 56667777776
Q ss_pred CC-----------eEEEEcCCCCCCCCccChHHHHHHHHHhhc
Q 024033 241 GK-----------STVEIIEADGHFPQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 241 ~~-----------~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 272 (273)
+. +++++++++||++++|+|++|++.|.+||+
T Consensus 1595 ~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~ 1637 (1655)
T PLN02980 1595 KSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLT 1637 (1655)
T ss_pred ccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHH
Confidence 42 479999999999999999999999999985
No 35
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.97 E-value=4e-30 Score=216.41 Aligned_cols=251 Identities=19% Similarity=0.236 Sum_probs=153.7
Q ss_pred ccceEEecC-C-CceEEEecCCCCCh-hchhhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHH
Q 024033 11 AMNAKIIGS-G-KETLVLAHGFGGDQ-SIWDKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLI 86 (273)
Q Consensus 11 ~~~~~~~G~-~-~~~vvllHG~~~~~-~~w~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~ 86 (273)
.+.|...|. + +++|||+||+++++ ..|..+...|.+ +|+|+++|+||||.|+.+. ....+.+++++++++.
T Consensus 13 ~~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~-----~~~~~~~~~~~~~~~~ 87 (288)
T TIGR01250 13 YHLFTKTGGEGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPD-----DSDELWTIDYFVDELE 87 (288)
T ss_pred eEEEEeccCCCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCC-----cccccccHHHHHHHHH
Confidence 344555552 3 57899999986555 455667777776 7999999999999995442 1111234999999999
Q ss_pred HHHHHcCCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCC-CC---CCCCCChhhHHHHHHHHHH------
Q 024033 87 TLLEENDLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINT-DD---YEGGFEPSDIENLISNVET------ 156 (273)
Q Consensus 87 ~~~~~~~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~------ 156 (273)
+++++++.++++|+||||||.+++.+|..+|++|++++++++....... .. ....+.. ...........
T Consensus 88 ~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 166 (288)
T TIGR01250 88 EVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKELPP-EVRAAIKRCEASGDYDN 166 (288)
T ss_pred HHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhhcCh-hHHHHHHHHHhccCcch
Confidence 9999999999999999999999999999999999999998864321000 00 0000000 00000000000
Q ss_pred -hHHHHhcccc--ccccCCCChhhHHHHHHHHHhcChhhHH--------HHHHHhcccccccccCCCCCCEEEEecCCCC
Q 024033 157 -NYASWASSFP--RLVVDTKDAPSVEKFENCLKRMRHEFAL--------PLAKTVFYSDEREILDKVETPCTIFQPSNDA 225 (273)
Q Consensus 157 -~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~ 225 (273)
.+......+. ........+.. .............. .....+...+....+.++++|+++++|++|.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~ 243 (288)
T TIGR01250 167 PEYQEAVEVFYHHLLCRTRKWPEA---LKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDT 243 (288)
T ss_pred HHHHHHHHHHHHHhhcccccchHH---HHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCCCc
Confidence 0000000000 00000000000 00000000000000 0000011123345678899999999999998
Q ss_pred ccchhHHHHHHHHcCCCeEEEEcCCCCCCCCccChHHHHHHHHHhhc
Q 024033 226 VVPNSVAYYMQEKMKGKSTVEIIEADGHFPQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 272 (273)
+ ++...+.+++.+++ +++++++++||+++.|+|+++++.|.+||+
T Consensus 244 ~-~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 244 M-TPEAAREMQELIAG-SRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred c-CHHHHHHHHHhccC-CeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 5 56777888888885 588999999999999999999999999984
No 36
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=4.4e-30 Score=222.14 Aligned_cols=243 Identities=16% Similarity=0.217 Sum_probs=150.6
Q ss_pred ccceEEecC-----CCceEEEecCCCCCh-hchhhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHH
Q 024033 11 AMNAKIIGS-----GKETLVLAHGFGGDQ-SIWDKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFAD 83 (273)
Q Consensus 11 ~~~~~~~G~-----~~~~vvllHG~~~~~-~~w~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~ 83 (273)
.++|+.++. .+++|||+||++.+. ..|..+...|.+ +|+|+++|+||||.|+.+. ....+++.+++
T Consensus 44 ~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~-------~~~~~~~~~~~ 116 (330)
T PLN02298 44 SLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLR-------AYVPNVDLVVE 116 (330)
T ss_pred EEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCcc-------ccCCCHHHHHH
Confidence 355555532 234699999998764 345677778876 7999999999999995332 11134899999
Q ss_pred HHHHHHHHcCC------CceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHh
Q 024033 84 DLITLLEENDL------KSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETN 157 (273)
Q Consensus 84 ~l~~~~~~~~~------~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (273)
|+.++++.+.. .+++|+||||||++++.++.++|++|+++|++++..... .. ... ...........
T Consensus 117 D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~-~~-~~~---~~~~~~~~~~~--- 188 (330)
T PLN02298 117 DCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKIS-DK-IRP---PWPIPQILTFV--- 188 (330)
T ss_pred HHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCC-cc-cCC---chHHHHHHHHH---
Confidence 99999987643 369999999999999999999999999999998753221 10 000 00111111111
Q ss_pred HHHHhcccc--c--cccCCCCh-hhHHHHHHH-HHhcC--hh--hHHHHHHHhcccccccccCCCCCCEEEEecCCCCcc
Q 024033 158 YASWASSFP--R--LVVDTKDA-PSVEKFENC-LKRMR--HE--FALPLAKTVFYSDEREILDKVETPCTIFQPSNDAVV 227 (273)
Q Consensus 158 ~~~~~~~~~--~--~~~~~~~~-~~~~~~~~~-~~~~~--~~--~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~ 227 (273)
..+..... + ........ .....+... ..... +. ....+... .....+.+.++++|+|+++|++|.++
T Consensus 189 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~i~~PvLii~G~~D~iv 265 (330)
T PLN02298 189 -ARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRV--TDYLGKKLKDVSIPFIVLHGSADVVT 265 (330)
T ss_pred -HHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHH--HHHHHHhhhhcCCCEEEEecCCCCCC
Confidence 11111100 0 00000000 000111000 00000 00 00111111 11234567899999999999999999
Q ss_pred chhHHHHHHHHcCC-CeEEEEcCCCCCCCCccChHH----HHHHHHHhh
Q 024033 228 PNSVAYYMQEKMKG-KSTVEIIEADGHFPQLTAHLQ----LIDVLNKVL 271 (273)
Q Consensus 228 ~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~----~~~~i~~fl 271 (273)
|++..+.+.+.++. .+++++++++||+++.++|+. +.+.|.+||
T Consensus 266 p~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl 314 (330)
T PLN02298 266 DPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWL 314 (330)
T ss_pred CHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHH
Confidence 99999988887752 368999999999999999975 455666665
No 37
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.97 E-value=3.6e-29 Score=219.61 Aligned_cols=241 Identities=22% Similarity=0.316 Sum_probs=157.1
Q ss_pred cceEEecC-CCceEEEecCCCCChhchhhhhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHH
Q 024033 12 MNAKIIGS-GKETLVLAHGFGGDQSIWDKITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLE 90 (273)
Q Consensus 12 ~~~~~~G~-~~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~ 90 (273)
++|...|+ .+++|||+||++++...|..+.+.|.+.|+|+++|+||||.|.... .. .+++++++++.++++
T Consensus 121 i~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~-------~~-~~~~~~~~~~~~~~~ 192 (371)
T PRK14875 121 VRYLRLGEGDGTPVVLIHGFGGDLNNWLFNHAALAAGRPVIALDLPGHGASSKAV-------GA-GSLDELAAAVLAFLD 192 (371)
T ss_pred EEEecccCCCCCeEEEECCCCCccchHHHHHHHHhcCCEEEEEcCCCCCCCCCCC-------CC-CCHHHHHHHHHHHHH
Confidence 45666664 3578999999999999999999999999999999999999984321 12 349999999999999
Q ss_pred HcCCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCC-CCCCCCCChhhHHHHHHHHHHhHHHHhccccccc
Q 024033 91 ENDLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINT-DDYEGGFEPSDIENLISNVETNYASWASSFPRLV 169 (273)
Q Consensus 91 ~~~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (273)
.++.++++|+||||||.+++.+|.++|+++.+++++++....... ..+...+..... ...+..+........
T Consensus 193 ~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 265 (371)
T PRK14875 193 ALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAES-------RRELKPVLELLFADP 265 (371)
T ss_pred hcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhcccc-------hhHHHHHHHHHhcCh
Confidence 999999999999999999999999999999999999864321000 000000000000 000011111000000
Q ss_pred cCCCChhhHHHHHHHHHhcC-hhhHHHHHHHhc-----ccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCCCe
Q 024033 170 VDTKDAPSVEKFENCLKRMR-HEFALPLAKTVF-----YSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKGKS 243 (273)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~ 243 (273)
. .................. ......+....+ ..+....+.+++||+++++|++|.++|+...+. +....
T Consensus 266 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~----l~~~~ 340 (371)
T PRK14875 266 A-LVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQG----LPDGV 340 (371)
T ss_pred h-hCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhh----ccCCC
Confidence 0 000011111111000000 000111111111 123344677899999999999999998765443 33245
Q ss_pred EEEEcCCCCCCCCccChHHHHHHHHHhhc
Q 024033 244 TVEIIEADGHFPQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 244 ~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 272 (273)
++++++++||++++|+|+++++.|.+|++
T Consensus 341 ~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 369 (371)
T PRK14875 341 AVHVLPGAGHMPQMEAAADVNRLLAEFLG 369 (371)
T ss_pred eEEEeCCCCCChhhhCHHHHHHHHHHHhc
Confidence 88999999999999999999999999985
No 38
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.96 E-value=4e-28 Score=207.78 Aligned_cols=237 Identities=19% Similarity=0.250 Sum_probs=143.1
Q ss_pred ccceEEecC-CCceEEEecCCCCChhchhhhhhhhh-cCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHH
Q 024033 11 AMNAKIIGS-GKETLVLAHGFGGDQSIWDKITPVLS-QHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITL 88 (273)
Q Consensus 11 ~~~~~~~G~-~~~~vvllHG~~~~~~~w~~~~~~L~-~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~ 88 (273)
.++|...|+ ++++|||+||++++...| .+...+. ++|+|+++|+||||.|+.+. ....+ +++++++|+..+
T Consensus 16 ~l~y~~~g~~~~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~-----~~~~~-~~~~~~~dl~~l 88 (306)
T TIGR01249 16 QLYYEQSGNPDGKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHA-----CLEEN-TTWDLVADIEKL 88 (306)
T ss_pred EEEEEECcCCCCCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCC-----CcccC-CHHHHHHHHHHH
Confidence 477888885 346899999998776554 3444454 48999999999999995432 11123 388999999999
Q ss_pred HHHcCCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCC--CCCC---CChhhHHHHHHHHHHhH--HHH
Q 024033 89 LEENDLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDD--YEGG---FEPSDIENLISNVETNY--ASW 161 (273)
Q Consensus 89 ~~~~~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~--~~~ 161 (273)
++++++++++++||||||++++.++.++|++|+++|++++......... +..+ +....+..+........ ..+
T Consensus 89 ~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (306)
T TIGR01249 89 REKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEWSWFYEGGASMIYPDAWQRFMDSIPENERNEQL 168 (306)
T ss_pred HHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHHHHHHhcchhhhCHHHHHHHhhhCChhhhhccH
Confidence 9999999999999999999999999999999999999987432100000 0000 00111111111100000 011
Q ss_pred hccccccccCCCChhhHHHHHH--------HHHhcCh---------hhHHHHHH--H---h---ccc---ccccccCCC-
Q 024033 162 ASSFPRLVVDTKDAPSVEKFEN--------CLKRMRH---------EFALPLAK--T---V---FYS---DEREILDKV- 212 (273)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~---------~~~~~~~~--~---~---~~~---~~~~~l~~i- 212 (273)
...+....... .+.....+.+ .+.+..+ .....+.. . . +.. +....+.++
T Consensus 169 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 247 (306)
T TIGR01249 169 VNAYHDRLQSG-DEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYFVNKGFLDVENFILDNISKIR 247 (306)
T ss_pred HHHHHHHccCC-CHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHHHHhchhcCchHHHHhhhhcc
Confidence 11111111111 1111011100 1111100 00111100 0 0 000 123455677
Q ss_pred CCCEEEEecCCCCccchhHHHHHHHHcCCCeEEEEcCCCCCCCC
Q 024033 213 ETPCTIFQPSNDAVVPNSVAYYMQEKMKGKSTVEIIEADGHFPQ 256 (273)
Q Consensus 213 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~ 256 (273)
++|+++|+|++|.++|...++.+++.+++ +++++++++||+++
T Consensus 248 ~~P~lii~g~~D~~~p~~~~~~~~~~~~~-~~~~~~~~~gH~~~ 290 (306)
T TIGR01249 248 NIPTYIVHGRYDLCCPLQSAWALHKAFPE-AELKVTNNAGHSAF 290 (306)
T ss_pred CCCeEEEecCCCCCCCHHHHHHHHHhCCC-CEEEEECCCCCCCC
Confidence 69999999999999999999999999985 58999999999986
No 39
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.96 E-value=3.6e-27 Score=206.44 Aligned_cols=262 Identities=19% Similarity=0.275 Sum_probs=170.5
Q ss_pred cccceEEecC----CCceEEEecCCCCChh-------------chhhhhh---hhhc-CceEEEEecCCCccccCC----
Q 024033 10 AAMNAKIIGS----GKETLVLAHGFGGDQS-------------IWDKITP---VLSQ-HYRVLAFDWLFSGAILNK---- 64 (273)
Q Consensus 10 ~~~~~~~~G~----~~~~vvllHG~~~~~~-------------~w~~~~~---~L~~-~~~via~D~~G~G~S~~~---- 64 (273)
.+++|+++|+ +.+.||+.|++++++. -|+.++- .|.. +|-||++|..|-|.|+.|
T Consensus 41 ~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~ 120 (389)
T PRK06765 41 VQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVIT 120 (389)
T ss_pred ceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCC
Confidence 5678999984 2468999999988652 2665543 3655 799999999998875332
Q ss_pred --------CCCCCC--CCcccccHHHHHHHHHHHHHHcCCCceE-EEEEChhHHHHHHHHhhCcccccceEEeecCCCcc
Q 024033 65 --------DHQSLY--NPVKYSSYEAFADDLITLLEENDLKSTL-FIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYI 133 (273)
Q Consensus 65 --------~~~~~~--~~~~~~s~~~~a~~l~~~~~~~~~~~~~-lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~ 133 (273)
.....+ +.+.| |++++++++..++++++++++. ++||||||++++.+|.++|++|+++|+++++++..
T Consensus 121 tgp~s~~p~tg~~~~~~fP~~-t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~~ 199 (389)
T PRK06765 121 TGPASINPKTGKPYGMDFPVV-TILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQND 199 (389)
T ss_pred CCCCCCCcCCCCccCCCCCcC-cHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCCC
Confidence 100000 11235 4999999999999999999986 99999999999999999999999999998865421
Q ss_pred CC----------------CCCCCC-C--Chhh---HHH--HHHHHHHhHHHH-hccccccc-cCC------CChhhHHHH
Q 024033 134 NT----------------DDYEGG-F--EPSD---IEN--LISNVETNYASW-ASSFPRLV-VDT------KDAPSVEKF 181 (273)
Q Consensus 134 ~~----------------~~~~~~-~--~~~~---~~~--~~~~~~~~~~~~-~~~~~~~~-~~~------~~~~~~~~~ 181 (273)
.. .+|..+ + .... +.. ...........| ...|.... ... ...-.++.+
T Consensus 200 ~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e~y 279 (389)
T PRK06765 200 AWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFEKE 279 (389)
T ss_pred hhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHHHH
Confidence 11 001111 0 0000 000 000000000111 11221110 000 000012232
Q ss_pred HHH-----HHhcChhhHHHHHHHhccc-------ccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCC---CeEEE
Q 024033 182 ENC-----LKRMRHEFALPLAKTVFYS-------DEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKG---KSTVE 246 (273)
Q Consensus 182 ~~~-----~~~~~~~~~~~~~~~~~~~-------~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~---~~~~~ 246 (273)
.+. ....++.....+.+.+... +..+.+.+|++|+++|+|++|.++|++..+.+++.++. .++++
T Consensus 280 l~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~ 359 (389)
T PRK06765 280 INKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVY 359 (389)
T ss_pred HHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEE
Confidence 221 2234555555555544322 45667889999999999999999999999999988862 36888
Q ss_pred EcCC-CCCCCCccChHHHHHHHHHhhc
Q 024033 247 IIEA-DGHFPQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 247 ~i~~-~gH~~~~e~p~~~~~~i~~fl~ 272 (273)
+|++ +||++++|+|+++++.|.+||+
T Consensus 360 ~I~s~~GH~~~le~p~~~~~~I~~FL~ 386 (389)
T PRK06765 360 EIESINGHMAGVFDIHLFEKKIYEFLN 386 (389)
T ss_pred EECCCCCcchhhcCHHHHHHHHHHHHc
Confidence 9986 8999999999999999999985
No 40
>PRK05855 short chain dehydrogenase; Validated
Probab=99.96 E-value=2.4e-28 Score=226.27 Aligned_cols=253 Identities=15% Similarity=0.261 Sum_probs=153.6
Q ss_pred ccceEEecC-CCceEEEecCCCCChhchhhhhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHH
Q 024033 11 AMNAKIIGS-GKETLVLAHGFGGDQSIWDKITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLL 89 (273)
Q Consensus 11 ~~~~~~~G~-~~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~ 89 (273)
.++|..+|+ .+|+|||+||++++...|.++.+.|.++|+|+++|+||||.|+.+. +...|+ ++++++|+.+++
T Consensus 14 ~l~~~~~g~~~~~~ivllHG~~~~~~~w~~~~~~L~~~~~Vi~~D~~G~G~S~~~~-----~~~~~~-~~~~a~dl~~~i 87 (582)
T PRK05855 14 RLAVYEWGDPDRPTVVLVHGYPDNHEVWDGVAPLLADRFRVVAYDVRGAGRSSAPK-----RTAAYT-LARLADDFAAVI 87 (582)
T ss_pred EEEEEEcCCCCCCeEEEEcCCCchHHHHHHHHHHhhcceEEEEecCCCCCCCCCCC-----cccccC-HHHHHHHHHHHH
Confidence 467778885 3578999999999999999999999889999999999999996442 112354 999999999999
Q ss_pred HHcCCCc-eEEEEEChhHHHHHHHHhh--CcccccceEEeecCCCccCCCCCC-CCC---ChhhHHHHHHHHHH-hHHHH
Q 024033 90 EENDLKS-TLFIGHSMSGMIGCIASVK--KPELFKRLILIGTSPRYINTDDYE-GGF---EPSDIENLISNVET-NYASW 161 (273)
Q Consensus 90 ~~~~~~~-~~lvGhS~GG~ia~~~a~~--~p~~v~~lvl~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~-~~~~~ 161 (273)
++++.++ ++|+||||||++++.++.. .|+++..++.+++.... ....+. ... .............. .+...
T Consensus 88 ~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (582)
T PRK05855 88 DAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLD-HVGFWLRSGLRRPTPRRLARALGQLLRSWYIYL 166 (582)
T ss_pred HHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchH-HHHHHHhhcccccchhhhhHHHHHHhhhHHHHH
Confidence 9998776 9999999999999888765 35555555554432100 000000 000 00011111100000 00000
Q ss_pred hc--cccccccCCCChhhHHHHHHHHHhcCh------------hhHHHHHHH-hcccccccccCCCCCCEEEEecCCCCc
Q 024033 162 AS--SFPRLVVDTKDAPSVEKFENCLKRMRH------------EFALPLAKT-VFYSDEREILDKVETPCTIFQPSNDAV 226 (273)
Q Consensus 162 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~-~~~~~~~~~l~~i~~P~lii~G~~D~~ 226 (273)
.. .+.................+....... ......... ......+..+.++++|+++|+|++|.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~ 246 (582)
T PRK05855 167 FHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRERYTDVPVQLIVPTGDPY 246 (582)
T ss_pred HhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCccCCccCceEEEEeCCCcc
Confidence 00 000000000000000000000000000 000000000 011112223556899999999999999
Q ss_pred cchhHHHHHHHHcCCCeEEEEcCCCCCCCCccChHHHHHHHHHhhc
Q 024033 227 VPNSVAYYMQEKMKGKSTVEIIEADGHFPQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 272 (273)
+|+...+.+++.+++ .++++++ +||++++|+|+++++.|.+|++
T Consensus 247 v~~~~~~~~~~~~~~-~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~ 290 (582)
T PRK05855 247 VRPALYDDLSRWVPR-LWRREIK-AGHWLPMSHPQVLAAAVAEFVD 290 (582)
T ss_pred cCHHHhccccccCCc-ceEEEcc-CCCcchhhChhHHHHHHHHHHH
Confidence 999988888887775 4777776 7999999999999999999985
No 41
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.96 E-value=1.9e-27 Score=208.84 Aligned_cols=233 Identities=13% Similarity=0.166 Sum_probs=149.5
Q ss_pred CCceEEEecCCCCChhchhhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCC----
Q 024033 20 GKETLVLAHGFGGDQSIWDKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDL---- 94 (273)
Q Consensus 20 ~~~~vvllHG~~~~~~~w~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~---- 94 (273)
.+++|||+||++++...|..+.+.|.+ +|+|+++|++|||.|+.+. .+ ..+++.+++|+.++++.+..
T Consensus 135 ~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~---~~----~~~~~~~~~Dl~~~l~~l~~~~~~ 207 (395)
T PLN02652 135 MRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLH---GY----VPSLDYVVEDTEAFLEKIRSENPG 207 (395)
T ss_pred CceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC---CC----CcCHHHHHHHHHHHHHHHHHhCCC
Confidence 346899999999999999999999976 8999999999999995432 11 12488899999998887642
Q ss_pred CceEEEEEChhHHHHHHHHhhCcc---cccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHHhccccccccC
Q 024033 95 KSTLFIGHSMSGMIGCIASVKKPE---LFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASWASSFPRLVVD 171 (273)
Q Consensus 95 ~~~~lvGhS~GG~ia~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (273)
.+++|+||||||.+++.++. +|+ +++++|+.++.... .. ...+......+. ....+.+......
T Consensus 208 ~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~-~~--------~~~~~~~~~~l~---~~~~p~~~~~~~~ 274 (395)
T PLN02652 208 VPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRV-KP--------AHPIVGAVAPIF---SLVAPRFQFKGAN 274 (395)
T ss_pred CCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECccccc-cc--------chHHHHHHHHHH---HHhCCCCcccCcc
Confidence 36999999999999997764 664 89999998754221 00 011111111111 1111110000000
Q ss_pred ---CCChhhHHHHHHHHHh-c--ChhhHHHHHHHh--cccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCC-C
Q 024033 172 ---TKDAPSVEKFENCLKR-M--RHEFALPLAKTV--FYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKG-K 242 (273)
Q Consensus 172 ---~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~--~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~-~ 242 (273)
................ . ...........+ ...+..+.+.+|++|+++++|++|.++|++..+++++.+++ .
T Consensus 275 ~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~ 354 (395)
T PLN02652 275 KRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRH 354 (395)
T ss_pred cccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCC
Confidence 0000001111111100 0 000000111110 01224556789999999999999999999999888887653 3
Q ss_pred eEEEEcCCCCCCCCcc-ChHHHHHHHHHhhc
Q 024033 243 STVEIIEADGHFPQLT-AHLQLIDVLNKVLG 272 (273)
Q Consensus 243 ~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl~ 272 (273)
++++++++++|.++.| +++++.+.|.+||.
T Consensus 355 k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~ 385 (395)
T PLN02652 355 KDIKLYDGFLHDLLFEPEREEVGRDIIDWME 385 (395)
T ss_pred ceEEEECCCeEEeccCCCHHHHHHHHHHHHH
Confidence 6899999999999777 89999999999984
No 42
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.95 E-value=3.8e-28 Score=185.93 Aligned_cols=236 Identities=15% Similarity=0.176 Sum_probs=165.4
Q ss_pred cccceEEecCCCceEEEecCC-CCChhchhhhhhhhhc--CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHH
Q 024033 10 AAMNAKIIGSGKETLVLAHGF-GGDQSIWDKITPVLSQ--HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLI 86 (273)
Q Consensus 10 ~~~~~~~~G~~~~~vvllHG~-~~~~~~w~~~~~~L~~--~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~ 86 (273)
+.++|..+|+|...|++++|. |+....|.+++..|.+ .++||++|.||||.|..|+ + .+ +..-+..-+++..
T Consensus 31 ~ql~y~~~G~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~-R-kf---~~~ff~~Da~~av 105 (277)
T KOG2984|consen 31 TQLGYCKYGHGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPE-R-KF---EVQFFMKDAEYAV 105 (277)
T ss_pred ceeeeeecCCCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCc-c-cc---hHHHHHHhHHHHH
Confidence 357888899987789999996 5566889998888876 4899999999999995443 1 11 1123667788899
Q ss_pred HHHHHcCCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHHhcccc
Q 024033 87 TLLEENDLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASWASSFP 166 (273)
Q Consensus 87 ~~~~~~~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (273)
++|++|..+++.++|||=||..++..|+++++.|.++++.++.... +..+- . .++.+. +...|.....
T Consensus 106 dLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayv-n~~~~------m----a~kgiR-dv~kWs~r~R 173 (277)
T KOG2984|consen 106 DLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYV-NHLGA------M----AFKGIR-DVNKWSARGR 173 (277)
T ss_pred HHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeeccccee-cchhH------H----HHhchH-HHhhhhhhhc
Confidence 9999999999999999999999999999999999999999875422 22110 0 000000 1111221110
Q ss_pred -cc--ccCCC-ChhhHHHHHHHHHhcChhhHHHHHHHhcc-cccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCC
Q 024033 167 -RL--VVDTK-DAPSVEKFENCLKRMRHEFALPLAKTVFY-SDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKG 241 (273)
Q Consensus 167 -~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~ 241 (273)
+. .++.. .....+++.....+.. .... .-++-.+.+|+||++|++|+.|+.++....-.+.+..+.
T Consensus 174 ~P~e~~Yg~e~f~~~wa~wvD~v~qf~---------~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~ 244 (277)
T KOG2984|consen 174 QPYEDHYGPETFRTQWAAWVDVVDQFH---------SFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSL 244 (277)
T ss_pred chHHHhcCHHHHHHHHHHHHHHHHHHh---------hcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhccc
Confidence 00 01110 0011111111111110 0000 114456899999999999999999999888888888885
Q ss_pred CeEEEEcCCCCCCCCccChHHHHHHHHHhhc
Q 024033 242 KSTVEIIEADGHFPQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 242 ~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 272 (273)
+++++.|+++|..++.-+++|+..+.+||+
T Consensus 245 -a~~~~~peGkHn~hLrya~eFnklv~dFl~ 274 (277)
T KOG2984|consen 245 -AKVEIHPEGKHNFHLRYAKEFNKLVLDFLK 274 (277)
T ss_pred -ceEEEccCCCcceeeechHHHHHHHHHHHh
Confidence 589999999999999999999999999985
No 43
>PLN02511 hydrolase
Probab=99.95 E-value=4e-27 Score=207.30 Aligned_cols=241 Identities=17% Similarity=0.197 Sum_probs=141.8
Q ss_pred CCceEEEecCCCCChhc-h-hhhhhh-hhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCC--
Q 024033 20 GKETLVLAHGFGGDQSI-W-DKITPV-LSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDL-- 94 (273)
Q Consensus 20 ~~~~vvllHG~~~~~~~-w-~~~~~~-L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~-- 94 (273)
++|+|||+||+++++.. | ..+... ++++|+|+++|+||||.|.... .++. ...+++|+.++++.+..
T Consensus 99 ~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~-------~~~~-~~~~~~Dl~~~i~~l~~~~ 170 (388)
T PLN02511 99 DAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTT-------PQFY-SASFTGDLRQVVDHVAGRY 170 (388)
T ss_pred CCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCC-------cCEE-cCCchHHHHHHHHHHHHHC
Confidence 45789999999776643 5 445544 5669999999999999994322 1122 34566777777776654
Q ss_pred --CceEEEEEChhHHHHHHHHhhCccc--ccceEEeecCCCc-cCCCCCCCCCChhhHHH-HHHHHHHhHHHHhcccccc
Q 024033 95 --KSTLFIGHSMSGMIGCIASVKKPEL--FKRLILIGTSPRY-INTDDYEGGFEPSDIEN-LISNVETNYASWASSFPRL 168 (273)
Q Consensus 95 --~~~~lvGhS~GG~ia~~~a~~~p~~--v~~lvl~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 168 (273)
.+++++||||||++++.++.++|++ |.++++++++... .....+..++. ..... +...+..........+...
T Consensus 171 ~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~~~-~~y~~~~~~~l~~~~~~~~~~~~~~ 249 (388)
T PLN02511 171 PSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKGFN-NVYDKALAKALRKIFAKHALLFEGL 249 (388)
T ss_pred CCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhccHH-HHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 5799999999999999999999987 8888888654321 00110111110 00011 1111111000000000000
Q ss_pred --ccCCC-C--hhhHHHHHHHHHhcChhhHHHHHH-HhcccccccccCCCCCCEEEEecCCCCccchhHH-HHHHHHcCC
Q 024033 169 --VVDTK-D--APSVEKFENCLKRMRHEFALPLAK-TVFYSDEREILDKVETPCTIFQPSNDAVVPNSVA-YYMQEKMKG 241 (273)
Q Consensus 169 --~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~-~~~~~~~~~ 241 (273)
.+... . .....++.+.+.. +........ .....+....+++|++|+++|+|++|+++|+... ..+++..++
T Consensus 250 ~~~~~~~~~~~~~~~~~fd~~~t~--~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~ 327 (388)
T PLN02511 250 GGEYNIPLVANAKTVRDFDDGLTR--VSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANPN 327 (388)
T ss_pred CCccCHHHHHhCCCHHHHHHhhhh--hcCCCCCHHHHHHHcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCCC
Confidence 00000 0 0011112111111 000000000 1112334567899999999999999999998654 445666774
Q ss_pred CeEEEEcCCCCCCCCccChHH------HHHHHHHhhc
Q 024033 242 KSTVEIIEADGHFPQLTAHLQ------LIDVLNKVLG 272 (273)
Q Consensus 242 ~~~~~~i~~~gH~~~~e~p~~------~~~~i~~fl~ 272 (273)
+++++++++||++++|+|+. +.+.|.+||+
T Consensus 328 -~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~ 363 (388)
T PLN02511 328 -CLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLE 363 (388)
T ss_pred -EEEEECCCcceeccccCCCCCCCCccHHHHHHHHHH
Confidence 68999999999999999976 4888888874
No 44
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.95 E-value=3.6e-26 Score=177.89 Aligned_cols=222 Identities=20% Similarity=0.287 Sum_probs=152.5
Q ss_pred CceEEEecCCCCChhchhhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHH---HHHHcCCCc
Q 024033 21 KETLVLAHGFGGDQSIWDKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLIT---LLEENDLKS 96 (273)
Q Consensus 21 ~~~vvllHG~~~~~~~w~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~---~~~~~~~~~ 96 (273)
+..|||||||+++++..+.+..+|.+ +|.|+||.+||||.... + + .. ++.++|-+++.+ .+.+.+.+.
T Consensus 15 ~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e-~----f--l~-t~~~DW~~~v~d~Y~~L~~~gy~e 86 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPE-D----F--LK-TTPRDWWEDVEDGYRDLKEAGYDE 86 (243)
T ss_pred CEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHH-H----H--hc-CCHHHHHHHHHHHHHHHHHcCCCe
Confidence 36899999999999999999999999 89999999999998721 1 1 11 236666666554 455568899
Q ss_pred eEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHHhccccccccCCCChh
Q 024033 97 TLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASWASSFPRLVVDTKDAP 176 (273)
Q Consensus 97 ~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (273)
+.++|-||||.+++.+|.++| ++++|.++++-....+ ...++..+... ++... +.+.+ ++
T Consensus 87 I~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~--------~~iie~~l~y~----~~~kk-----~e~k~-~e 146 (243)
T COG1647 87 IAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSW--------RIIIEGLLEYF----RNAKK-----YEGKD-QE 146 (243)
T ss_pred EEEEeecchhHHHHHHHhhCC--ccceeeecCCcccccc--------hhhhHHHHHHH----HHhhh-----ccCCC-HH
Confidence 999999999999999999999 8999999875432111 11122222211 11100 11111 12
Q ss_pred hHHHHHHHHHhcChhhHHHHHHHhcccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcC-CCeEEEEcCCCCCCC
Q 024033 177 SVEKFENCLKRMRHEFALPLAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMK-GKSTVEIIEADGHFP 255 (273)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~ 255 (273)
..++..+.+.........++.. +..+.+..+..|..|++++.|++|.++|.+.++.+...+. ..+++.+++++||.+
T Consensus 147 ~~~~e~~~~~~~~~~~~~~~~~--~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVI 224 (243)
T COG1647 147 QIDKEMKSYKDTPMTTTAQLKK--LIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVI 224 (243)
T ss_pred HHHHHHHHhhcchHHHHHHHHH--HHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCcee
Confidence 2222222222111111112211 2345777899999999999999999999999998887764 347999999999977
Q ss_pred Cc-cChHHHHHHHHHhhc
Q 024033 256 QL-TAHLQLIDVLNKVLG 272 (273)
Q Consensus 256 ~~-e~p~~~~~~i~~fl~ 272 (273)
.. +.-|.+.+.+.+||+
T Consensus 225 t~D~Erd~v~e~V~~FL~ 242 (243)
T COG1647 225 TLDKERDQVEEDVITFLE 242 (243)
T ss_pred ecchhHHHHHHHHHHHhh
Confidence 55 556888889999985
No 45
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.94 E-value=7.2e-26 Score=184.61 Aligned_cols=236 Identities=17% Similarity=0.247 Sum_probs=155.8
Q ss_pred ceEEEecCCCCCh-hchhhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHc------C
Q 024033 22 ETLVLAHGFGGDQ-SIWDKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEEN------D 93 (273)
Q Consensus 22 ~~vvllHG~~~~~-~~w~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~------~ 93 (273)
..|+++||++.+. ..|+.....|+. +|.|+++|++|||.|+... .+ ..+++..++|+..+.+.. .
T Consensus 55 ~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~---~y----i~~~d~~v~D~~~~~~~i~~~~e~~ 127 (313)
T KOG1455|consen 55 GLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLH---AY----VPSFDLVVDDVISFFDSIKEREENK 127 (313)
T ss_pred eEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCc---cc----CCcHHHHHHHHHHHHHHHhhccccC
Confidence 3699999998875 777888999988 8999999999999996321 11 346999999999998853 2
Q ss_pred CCceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHHhccccccccCCC
Q 024033 94 LKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASWASSFPRLVVDTK 173 (273)
Q Consensus 94 ~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (273)
..+.+|.||||||.|++.++.++|+-..++|++++........ -....+..++..+......|...-.......
T Consensus 128 ~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~-----kp~p~v~~~l~~l~~liP~wk~vp~~d~~~~- 201 (313)
T KOG1455|consen 128 GLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDT-----KPHPPVISILTLLSKLIPTWKIVPTKDIIDV- 201 (313)
T ss_pred CCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCcc-----CCCcHHHHHHHHHHHhCCceeecCCcccccc-
Confidence 3468999999999999999999999999999998754432110 0112223333222222222321000000000
Q ss_pred ChhhHHHHHHHHHhcChhh-----HHHHHHHhc--ccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCC-CeEE
Q 024033 174 DAPSVEKFENCLKRMRHEF-----ALPLAKTVF--YSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKG-KSTV 245 (273)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~--~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~ 245 (273)
...+...+.....+|-. ..+.+..+. ..++.+.+.++++|.+++||++|.++.+..++.+.+..++ .+++
T Consensus 202 --~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTl 279 (313)
T KOG1455|consen 202 --AFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTL 279 (313)
T ss_pred --ccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCce
Confidence 01111111111122211 112222222 3467788999999999999999999999999999998764 3799
Q ss_pred EEcCCCCCCCCc----cChHHHHHHHHHhhc
Q 024033 246 EIIEADGHFPQL----TAHLQLIDVLNKVLG 272 (273)
Q Consensus 246 ~~i~~~gH~~~~----e~p~~~~~~i~~fl~ 272 (273)
+++||.=|.+.. |+-+.+...|.+||+
T Consensus 280 KlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~ 310 (313)
T KOG1455|consen 280 KLYPGMWHSLLSGEPDENVEIVFGDIISWLD 310 (313)
T ss_pred eccccHHHHhhcCCCchhHHHHHHHHHHHHH
Confidence 999999998876 344555556666653
No 46
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.93 E-value=6.7e-25 Score=185.96 Aligned_cols=235 Identities=16% Similarity=0.186 Sum_probs=146.1
Q ss_pred ceEEEecCCCCChhchhhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcC----CCc
Q 024033 22 ETLVLAHGFGGDQSIWDKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEEND----LKS 96 (273)
Q Consensus 22 ~~vvllHG~~~~~~~w~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~----~~~ 96 (273)
.+||++||.+.+...|.+++..|.. +|.|+++|+||||.|.++. + ....+++++.+|+.++++... ..+
T Consensus 35 g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~-r-----g~~~~f~~~~~dl~~~~~~~~~~~~~~p 108 (298)
T COG2267 35 GVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQ-R-----GHVDSFADYVDDLDAFVETIAEPDPGLP 108 (298)
T ss_pred cEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCC-c-----CCchhHHHHHHHHHHHHHHHhccCCCCC
Confidence 5899999999999999999999988 8999999999999995211 1 123469999999999998864 357
Q ss_pred eEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHHhcc--ccc----ccc
Q 024033 97 TLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASWASS--FPR----LVV 170 (273)
Q Consensus 97 ~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~ 170 (273)
++|+||||||.|++.++.+++.+|.++|+.++.-.... . ........... .....+... +.. ...
T Consensus 109 ~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~-~-----~~~~~~~~~~~---~~~~~~~p~~~~~~~~~~~~~ 179 (298)
T COG2267 109 VFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGG-A-----ILRLILARLAL---KLLGRIRPKLPVDSNLLEGVL 179 (298)
T ss_pred eEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCCh-h-----HHHHHHHHHhc---ccccccccccccCcccccCcC
Confidence 99999999999999999999999999999876532210 0 00000000000 000011110 010 000
Q ss_pred C---CCChhhHHHHHHHHH-hcChhhHHHHHHHhccc--ccccccCCCCCCEEEEecCCCCccc-hhHHHHHHHHcCC-C
Q 024033 171 D---TKDAPSVEKFENCLK-RMRHEFALPLAKTVFYS--DEREILDKVETPCTIFQPSNDAVVP-NSVAYYMQEKMKG-K 242 (273)
Q Consensus 171 ~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~l~~i~~P~lii~G~~D~~~~-~~~~~~~~~~~~~-~ 242 (273)
. ...+...+.+.+... ........-+....... ........+++|+++++|++|.+++ .+....+.+.... .
T Consensus 180 ~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~ 259 (298)
T COG2267 180 TDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPD 259 (298)
T ss_pred cchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCC
Confidence 0 001112222221111 11111110011111111 1233457789999999999999999 4655555555432 3
Q ss_pred eEEEEcCCCCCCCCccChH---HHHHHHHHhh
Q 024033 243 STVEIIEADGHFPQLTAHL---QLIDVLNKVL 271 (273)
Q Consensus 243 ~~~~~i~~~gH~~~~e~p~---~~~~~i~~fl 271 (273)
+++++++++.|-++.|.+- ++.+.+.+|+
T Consensus 260 ~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l 291 (298)
T COG2267 260 KELKVIPGAYHELLNEPDRAREEVLKDILAWL 291 (298)
T ss_pred ceEEecCCcchhhhcCcchHHHHHHHHHHHHH
Confidence 5899999999999888775 4555555554
No 47
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.93 E-value=1.7e-24 Score=179.26 Aligned_cols=231 Identities=20% Similarity=0.277 Sum_probs=155.5
Q ss_pred CceEEEecCCCCChhchhhhhhhhhc--CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcC----C
Q 024033 21 KETLVLAHGFGGDQSIWDKITPVLSQ--HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEEND----L 94 (273)
Q Consensus 21 ~~~vvllHG~~~~~~~w~~~~~~L~~--~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~----~ 94 (273)
.|+++++||+.++...|+.+.-.|+. +.+|++.|.|-||.|..-. .+ +...+++|+..|++..+ .
T Consensus 52 ~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~--------~h-~~~~ma~dv~~Fi~~v~~~~~~ 122 (315)
T KOG2382|consen 52 APPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKIT--------VH-NYEAMAEDVKLFIDGVGGSTRL 122 (315)
T ss_pred CCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCcccc--------cc-CHHHHHHHHHHHHHHccccccc
Confidence 57899999999999999999999988 5799999999999993221 23 48999999999999874 5
Q ss_pred CceEEEEEChhH-HHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHH---------hHHHHhcc
Q 024033 95 KSTLFIGHSMSG-MIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVET---------NYASWASS 164 (273)
Q Consensus 95 ~~~~lvGhS~GG-~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~ 164 (273)
.++.++|||||| -+++..+.++|+.+.++|+++.+|...... .......+..+.. ......+.
T Consensus 123 ~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~-------~~e~~e~i~~m~~~d~~~~~~~~rke~~~~ 195 (315)
T KOG2382|consen 123 DPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRS-------YGEYRELIKAMIQLDLSIGVSRGRKEALKS 195 (315)
T ss_pred CCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcc-------cchHHHHHHHHHhccccccccccHHHHHHH
Confidence 689999999999 778888899999999999999988532211 0001111111100 00000000
Q ss_pred ccccccCCCChhhHHHHHHHHHh--c---------ChhhHHHHHHHhccccccccc--CCCCCCEEEEecCCCCccchhH
Q 024033 165 FPRLVVDTKDAPSVEKFENCLKR--M---------RHEFALPLAKTVFYSDEREIL--DKVETPCTIFQPSNDAVVPNSV 231 (273)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~--~---------~~~~~~~~~~~~~~~~~~~~l--~~i~~P~lii~G~~D~~~~~~~ 231 (273)
+... ..+.....+.....+ . +.+....+.........+..+ ...+.||+++.|.++..++.+.
T Consensus 196 l~~~----~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~ 271 (315)
T KOG2382|consen 196 LIEV----GFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEH 271 (315)
T ss_pred HHHH----hcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhH
Confidence 0000 000111111111111 0 000001111110011112222 6678999999999999999998
Q ss_pred HHHHHHHcCCCeEEEEcCCCCCCCCccChHHHHHHHHHhhc
Q 024033 232 AYYMQEKMKGKSTVEIIEADGHFPQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 232 ~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 272 (273)
-..+.+.+|. +++..+++||||+|.|+|+.|.+.|.+|+.
T Consensus 272 ~~~~~~~fp~-~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~ 311 (315)
T KOG2382|consen 272 YPRMEKIFPN-VEVHELDEAGHWVHLEKPEEFIESISEFLE 311 (315)
T ss_pred HHHHHHhccc-hheeecccCCceeecCCHHHHHHHHHHHhc
Confidence 9999999995 699999999999999999999999999874
No 48
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.93 E-value=5.5e-24 Score=183.84 Aligned_cols=252 Identities=13% Similarity=0.125 Sum_probs=148.1
Q ss_pred cceEEec--CCCceEEEecCCCCChh-ch-------------------------hhhhhhhhc-CceEEEEecCCCcccc
Q 024033 12 MNAKIIG--SGKETLVLAHGFGGDQS-IW-------------------------DKITPVLSQ-HYRVLAFDWLFSGAIL 62 (273)
Q Consensus 12 ~~~~~~G--~~~~~vvllHG~~~~~~-~w-------------------------~~~~~~L~~-~~~via~D~~G~G~S~ 62 (273)
++++.+- +.+.+|+++||++.++. .+ ..++..|.+ +|+|+++|+||||.|+
T Consensus 10 l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~rGHG~S~ 89 (332)
T TIGR01607 10 LKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQGHGESD 89 (332)
T ss_pred EEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecccccCCCc
Confidence 4444442 23458999999999885 21 356888866 8999999999999995
Q ss_pred CCCCCCCCCCcccccHHHHHHHHHHHHHHcC------------------------CCceEEEEEChhHHHHHHHHhhCcc
Q 024033 63 NKDHQSLYNPVKYSSYEAFADDLITLLEEND------------------------LKSTLFIGHSMSGMIGCIASVKKPE 118 (273)
Q Consensus 63 ~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~------------------------~~~~~lvGhS~GG~ia~~~a~~~p~ 118 (273)
.... ......+++++++|+.++++... ..+++|+||||||+|++.++..+++
T Consensus 90 ~~~~----~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~ 165 (332)
T TIGR01607 90 GLQN----LRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGK 165 (332)
T ss_pred cccc----cccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhcc
Confidence 3320 01112469999999999987631 2468999999999999999876653
Q ss_pred --------cccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHHhccccc---cccCCCChhhHHHHHHHHHh
Q 024033 119 --------LFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASWASSFPR---LVVDTKDAPSVEKFENCLKR 187 (273)
Q Consensus 119 --------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 187 (273)
.++++|++++....... ....... +......+......+.+.+.. .... ..+...+.+......
T Consensus 166 ~~~~~~~~~i~g~i~~s~~~~i~~~-~~~~~~~---~~~~~~~l~~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~Dp~~ 240 (332)
T TIGR01607 166 SNENNDKLNIKGCISLSGMISIKSV-GSDDSFK---FKYFYLPVMNFMSRVFPTFRISKKIRYE-KSPYVNDIIKFDKFR 240 (332)
T ss_pred ccccccccccceEEEeccceEEecc-cCCCcch---hhhhHHHHHHHHHHHCCcccccCccccc-cChhhhhHHhcCccc
Confidence 58899887764321000 0000000 000001010111111111110 0000 111122222111111
Q ss_pred cChhhHHHHHHHhcc--cccccccCCC--CCCEEEEecCCCCccchhHHHHHHHHcCC-CeEEEEcCCCCCCCCccC-hH
Q 024033 188 MRHEFALPLAKTVFY--SDEREILDKV--ETPCTIFQPSNDAVVPNSVAYYMQEKMKG-KSTVEIIEADGHFPQLTA-HL 261 (273)
Q Consensus 188 ~~~~~~~~~~~~~~~--~~~~~~l~~i--~~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~-p~ 261 (273)
............++. ....+.+.++ ++|+++++|++|.+++++..+.+.+.... .++++++++++|.++.|. .+
T Consensus 241 ~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~ 320 (332)
T TIGR01607 241 YDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITIEPGNE 320 (332)
T ss_pred cCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCccCCCHH
Confidence 111111111111111 1122334555 79999999999999999888888776542 368899999999999986 68
Q ss_pred HHHHHHHHhhc
Q 024033 262 QLIDVLNKVLG 272 (273)
Q Consensus 262 ~~~~~i~~fl~ 272 (273)
++.+.|.+||.
T Consensus 321 ~v~~~i~~wL~ 331 (332)
T TIGR01607 321 EVLKKIIEWIS 331 (332)
T ss_pred HHHHHHHHHhh
Confidence 89999999985
No 49
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.92 E-value=3.5e-25 Score=180.81 Aligned_cols=211 Identities=21% Similarity=0.296 Sum_probs=132.1
Q ss_pred ceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCCCceEEEEEChhHHHHHHHHhhCcccccceEEee
Q 024033 48 YRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIG 127 (273)
Q Consensus 48 ~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~ 127 (273)
|+|+++|+||+|.|+ |.. ......|+ .+++++++..++++++.++++++||||||++++.+|+.+|++|+++|+++
T Consensus 1 f~vi~~d~rG~g~S~-~~~--~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~ 76 (230)
T PF00561_consen 1 FDVILFDLRGFGYSS-PHW--DPDFPDYT-TDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLIS 76 (230)
T ss_dssp EEEEEEECTTSTTSS-SCC--GSGSCTHC-HHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEES
T ss_pred CEEEEEeCCCCCCCC-CCc--cCCccccc-HHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEe
Confidence 789999999999995 300 01123455 99999999999999999999999999999999999999999999999998
Q ss_pred cCC---CccCCCCCCCCCChhhHHHH-HHH----H----HHhHHHHhccccccccCCC-ChhhH-HHHHHHHHhcC-hhh
Q 024033 128 TSP---RYINTDDYEGGFEPSDIENL-ISN----V----ETNYASWASSFPRLVVDTK-DAPSV-EKFENCLKRMR-HEF 192 (273)
Q Consensus 128 ~~~---~~~~~~~~~~~~~~~~~~~~-~~~----~----~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~-~~~ 192 (273)
+.+ .......+ ........ ... . ......+...+ ...... ..... +...+...... ...
T Consensus 77 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (230)
T PF00561_consen 77 PPPDLPDGLWNRIW----PRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQF--FAYDREFVEDFLKQFQSQQYARFAETDA 150 (230)
T ss_dssp ESSHHHHHHHHHCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHTHHHHHHHHHHHHTCHHHH
T ss_pred eeccchhhhhHHHH----hhhhhhhhHHHhhhccccccchhhhhhhhhhe--eeccCccccchhhccchhhhhHHHHHHH
Confidence 752 10000000 00000000 000 0 00000000000 000000 00000 00011111100 000
Q ss_pred HHH----HHHHhcccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCCCeEEEEcCCCCCCCCccChHHHHHHHH
Q 024033 193 ALP----LAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKGKSTVEIIEADGHFPQLTAHLQLIDVLN 268 (273)
Q Consensus 193 ~~~----~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~ 268 (273)
... ........+....+.+|++|+++++|++|..+|++....+++.+|+ .++++++++||+.+++.|+++++.|.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~-~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 151 FDNMFWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPN-SQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTT-EEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred HhhhccccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCC-CEEEECCCCChHHHhcCHHhhhhhhc
Confidence 000 1111222344556788999999999999999999999999999996 68999999999999999999999886
Q ss_pred H
Q 024033 269 K 269 (273)
Q Consensus 269 ~ 269 (273)
+
T Consensus 230 ~ 230 (230)
T PF00561_consen 230 K 230 (230)
T ss_dssp -
T ss_pred C
Confidence 3
No 50
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.92 E-value=6.2e-23 Score=168.87 Aligned_cols=251 Identities=25% Similarity=0.412 Sum_probs=149.7
Q ss_pred cceEEecCCCceEEEecCCCCChhchhhhhhhhhc---CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHH
Q 024033 12 MNAKIIGSGKETLVLAHGFGGDQSIWDKITPVLSQ---HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITL 88 (273)
Q Consensus 12 ~~~~~~G~~~~~vvllHG~~~~~~~w~~~~~~L~~---~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~ 88 (273)
..|+..|.+.++|+++||++++...|......+.. .|+|+++|+||||.|. . . .+. ...+++++..+
T Consensus 12 ~~~~~~~~~~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~--~---~----~~~-~~~~~~~~~~~ 81 (282)
T COG0596 12 LAYREAGGGGPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD--P---A----GYS-LSAYADDLAAL 81 (282)
T ss_pred EEEeecCCCCCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC--c---c----ccc-HHHHHHHHHHH
Confidence 34444444356899999999999999884344333 2999999999999994 1 0 112 55559999999
Q ss_pred HHHcCCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCC----CCCChhhHHHHHHHH-HHhHHHHhc
Q 024033 89 LEENDLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYE----GGFEPSDIENLISNV-ETNYASWAS 163 (273)
Q Consensus 89 ~~~~~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~ 163 (273)
+++++..+++++||||||.+++.++.++|+++++++++++........... ............... ......+..
T Consensus 82 ~~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (282)
T COG0596 82 LDALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLA 161 (282)
T ss_pred HHHhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhhhhhhhh
Confidence 999999999999999999999999999999999999999764311110000 000000000000000 000000000
Q ss_pred cc--cccccC-------CCCh-hhHHHHHHHHHhcChhhHHHHHHHhcccccccccCCCCCCEEEEecCCCCccchhHHH
Q 024033 164 SF--PRLVVD-------TKDA-PSVEKFENCLKRMRHEFALPLAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSVAY 233 (273)
Q Consensus 164 ~~--~~~~~~-------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~ 233 (273)
.. ...... .... ............................+....+.++++|+++++|++|.+.|.....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~ 241 (282)
T COG0596 162 ALGLLAALAAAARAGLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELAR 241 (282)
T ss_pred cccccccccccchhccccccccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEecCCCCcCCHHHHH
Confidence 00 000000 0000 0000000000000000000000011111234457788999999999999777665556
Q ss_pred HHHHHcCCCeEEEEcCCCCCCCCccChHHHHHHHHHhhc
Q 024033 234 YMQEKMKGKSTVEIIEADGHFPQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 234 ~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 272 (273)
.+.+..+...++.+++++||+++.++|+.+++.+.+|++
T Consensus 242 ~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 242 RLAAALPNDARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred HHHhhCCCCceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 667777642588999999999999999999999988653
No 51
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.91 E-value=6.3e-23 Score=172.81 Aligned_cols=228 Identities=12% Similarity=0.102 Sum_probs=136.2
Q ss_pred CceEEEecCCCC----Chhchhhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHc---
Q 024033 21 KETLVLAHGFGG----DQSIWDKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEEN--- 92 (273)
Q Consensus 21 ~~~vvllHG~~~----~~~~w~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~--- 92 (273)
+++||++||.+. +...|..+.+.|++ +|+|+++|++|||.|+... + +++++.+|+.+.++.+
T Consensus 26 ~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~---------~-~~~~~~~d~~~~~~~l~~~ 95 (274)
T TIGR03100 26 TTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN---------L-GFEGIDADIAAAIDAFREA 95 (274)
T ss_pred CCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC---------C-CHHHHHHHHHHHHHHHHhh
Confidence 457888888653 34456777888987 7999999999999983211 2 3666777777777665
Q ss_pred --CCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHHhcccccccc
Q 024033 93 --DLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASWASSFPRLVV 170 (273)
Q Consensus 93 --~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (273)
+.++++++||||||.+++.+|.. +.+|+++|++++.... .+ ......+.............|... .-
T Consensus 96 ~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~----~~ 164 (274)
T TIGR03100 96 APHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRT--EA----AQAASRIRHYYLGQLLSADFWRKL----LS 164 (274)
T ss_pred CCCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCC--cc----cchHHHHHHHHHHHHhChHHHHHh----cC
Confidence 56789999999999999999765 5689999999864211 10 000001111111100000111111 11
Q ss_pred CCC-ChhhHHHHHHHHHhcCh-hhHHHHHHHhcccccccccCCCCCCEEEEecCCCCccchhHH-----HHHHHHc--CC
Q 024033 171 DTK-DAPSVEKFENCLKRMRH-EFALPLAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSVA-----YYMQEKM--KG 241 (273)
Q Consensus 171 ~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~-----~~~~~~~--~~ 241 (273)
+.. ..+....+...+....+ ....... ....++...+.++++|+++++|+.|...+.-.. ...++.+ +
T Consensus 165 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~P~ll~~g~~D~~~~~~~~~~~~~~~~~~~l~~~- 241 (274)
T TIGR03100 165 GEVNLGSSLRGLGDALLKARQKGDEVAHG--GLAERMKAGLERFQGPVLFILSGNDLTAQEFADSVLGEPAWRGALEDP- 241 (274)
T ss_pred CCccHHHHHHHHHHHHHhhhhcCCCcccc--hHHHHHHHHHHhcCCcEEEEEcCcchhHHHHHHHhccChhhHHHhhcC-
Confidence 111 01112222221111100 0000000 023345566778899999999999988643221 4445545 4
Q ss_pred CeEEEEcCCCCCCCCccCh-HHHHHHHHHhhc
Q 024033 242 KSTVEIIEADGHFPQLTAH-LQLIDVLNKVLG 272 (273)
Q Consensus 242 ~~~~~~i~~~gH~~~~e~p-~~~~~~i~~fl~ 272 (273)
.+++..+++++|++..|.+ +++.+.|.+||+
T Consensus 242 ~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 242 GIERVEIDGADHTFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred CeEEEecCCCCcccccHHHHHHHHHHHHHHHh
Confidence 3689999999999955555 999999999985
No 52
>PRK10985 putative hydrolase; Provisional
Probab=99.91 E-value=4e-23 Score=178.17 Aligned_cols=230 Identities=15% Similarity=0.182 Sum_probs=129.2
Q ss_pred CceEEEecCCCCChhc-h-hhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCCCce
Q 024033 21 KETLVLAHGFGGDQSI-W-DKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDLKST 97 (273)
Q Consensus 21 ~~~vvllHG~~~~~~~-w-~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~~~~ 97 (273)
+|+||++||++++... | ..++..|.+ +|+|+++|+||||.|...... .+. ....++....+..+.++++.+++
T Consensus 58 ~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~-~~~---~~~~~D~~~~i~~l~~~~~~~~~ 133 (324)
T PRK10985 58 KPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHR-IYH---SGETEDARFFLRWLQREFGHVPT 133 (324)
T ss_pred CCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcc-eEC---CCchHHHHHHHHHHHHhCCCCCE
Confidence 5789999999877443 4 668888877 899999999999977321100 000 11244443334344445677889
Q ss_pred EEEEEChhHHHHHHHHhhCccc--ccceEEeecCCCccCCC-CCCCCCChhhHHHH-HHHHHHhHHHHhccccccccCCC
Q 024033 98 LFIGHSMSGMIGCIASVKKPEL--FKRLILIGTSPRYINTD-DYEGGFEPSDIENL-ISNVETNYASWASSFPRLVVDTK 173 (273)
Q Consensus 98 ~lvGhS~GG~ia~~~a~~~p~~--v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 173 (273)
+++||||||.+++.++..+++. +.++|+++++....... .....+. ....+. ...+..........+... ...
T Consensus 134 ~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~~~~~~~~~~~-~~~- 210 (324)
T PRK10985 134 AAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFS-RVYQRYLLNLLKANAARKLAAYPGT-LPI- 210 (324)
T ss_pred EEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHH-HHHHHHHHHHHHHHHHHHHHhcccc-ccC-
Confidence 9999999999888877776644 88999988753210000 0000000 001110 111111111100111100 000
Q ss_pred Chh------hHHHHHHHHHhcChhhHHHHHHHhcccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCCCeEEEE
Q 024033 174 DAP------SVEKFENCLKRMRHEFALPLAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKGKSTVEI 247 (273)
Q Consensus 174 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~ 247 (273)
..+ ...++.+.. ......+..........+..+.+++|++|+++|+|++|++++++....+.+..++ .++++
T Consensus 211 ~~~~~~~~~~~~~fd~~~-~~~~~g~~~~~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~-~~~~~ 288 (324)
T PRK10985 211 NLAQLKSVRRLREFDDLI-TARIHGFADAIDYYRQCSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPPN-VEYQL 288 (324)
T ss_pred CHHHHhcCCcHHHHhhhh-eeccCCCCCHHHHHHHCChHHHHhCCCCCEEEEecCCCCCCChhhChHHHHhCCC-eEEEE
Confidence 000 112221111 1110011111111112334567889999999999999999998887777776664 68889
Q ss_pred cCCCCCCCCccC
Q 024033 248 IEADGHFPQLTA 259 (273)
Q Consensus 248 i~~~gH~~~~e~ 259 (273)
++++||++++|-
T Consensus 289 ~~~~GH~~~~~g 300 (324)
T PRK10985 289 TEHGGHVGFVGG 300 (324)
T ss_pred CCCCCceeeCCC
Confidence 999999999985
No 53
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.91 E-value=9.3e-23 Score=183.54 Aligned_cols=250 Identities=14% Similarity=0.170 Sum_probs=151.5
Q ss_pred cccccccccceEEecC--CCceEEEecCCCCChhchh-----hhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCccc
Q 024033 4 REQGLSAAMNAKIIGS--GKETLVLAHGFGGDQSIWD-----KITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKY 75 (273)
Q Consensus 4 ~~~~~~~~~~~~~~G~--~~~~vvllHG~~~~~~~w~-----~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~ 75 (273)
=+..+...++|.-... .++|||++||+.....+|+ .++.+|.+ +|+|+++|++|+|.|+... ....|
T Consensus 169 ~~~~~~eLi~Y~P~t~~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~-----~~ddY 243 (532)
T TIGR01838 169 FENELFQLIQYEPTTETVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADK-----TFDDY 243 (532)
T ss_pred EECCcEEEEEeCCCCCcCCCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccC-----Chhhh
Confidence 3445556667754321 4578999999999999996 68888876 8999999999999884431 11134
Q ss_pred ccHHHHHHHHHHHHHHcCCCceEEEEEChhHHHHH----HHHhhC-cccccceEEeecCCCccCCCCCCCCCC-hh---h
Q 024033 76 SSYEAFADDLITLLEENDLKSTLFIGHSMSGMIGC----IASVKK-PELFKRLILIGTSPRYINTDDYEGGFE-PS---D 146 (273)
Q Consensus 76 ~s~~~~a~~l~~~~~~~~~~~~~lvGhS~GG~ia~----~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~~~~~-~~---~ 146 (273)
. .+.+.+.+..+.+.++.++++++||||||.++. .+++.+ |++|++++++++...+... +-...+. .. .
T Consensus 244 ~-~~~i~~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~-G~l~~f~~~~~~~~ 321 (532)
T TIGR01838 244 I-RDGVIAALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDP-GELGVFVDEEIVAG 321 (532)
T ss_pred H-HHHHHHHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCc-chhhhhcCchhHHH
Confidence 3 556677788888888999999999999999852 345555 8899999999986543211 1000110 11 1
Q ss_pred HHHHHHH--------HHHhHH-------HHhccccccccCCCChhh-HHHHHHHHHhcChhhHHHHHHHhc---------
Q 024033 147 IENLISN--------VETNYA-------SWASSFPRLVVDTKDAPS-VEKFENCLKRMRHEFALPLAKTVF--------- 201 (273)
Q Consensus 147 ~~~~~~~--------~~~~~~-------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--------- 201 (273)
+++.... +...+. .|.....+.+.+...... ...+......+.......+.+.++
T Consensus 322 ~e~~~~~~G~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~ 401 (532)
T TIGR01838 322 IERQNGGGGYLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGG 401 (532)
T ss_pred HHHHHHhcCCCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCe
Confidence 1111100 000000 011001111111110000 000000000011111112222222
Q ss_pred --ccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCCCeEEEEcCCCCCCCCccChH
Q 024033 202 --YSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKGKSTVEIIEADGHFPQLTAHL 261 (273)
Q Consensus 202 --~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~ 261 (273)
..+....+.+|++|+++|+|++|.++|+..+..+.+.+++ .+..+++++||++++++|.
T Consensus 402 ~~v~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~~-~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 402 LEVCGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALLGG-PKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred eEECCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCCC-CEEEEECCCCCchHhhCCC
Confidence 2334567899999999999999999999999999999985 4778899999999999985
No 54
>PRK11071 esterase YqiA; Provisional
Probab=99.90 E-value=3.4e-22 Score=159.04 Aligned_cols=184 Identities=16% Similarity=0.106 Sum_probs=125.6
Q ss_pred ceEEEecCCCCChhchhh--hhhhhhc---CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCCCc
Q 024033 22 ETLVLAHGFGGDQSIWDK--ITPVLSQ---HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDLKS 96 (273)
Q Consensus 22 ~~vvllHG~~~~~~~w~~--~~~~L~~---~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~~~ 96 (273)
|+|||+|||+++...|.. +.+.|++ +|+|+++|+|||| +++++++.+++++++.++
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-------------------~~~~~~l~~l~~~~~~~~ 62 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP-------------------ADAAELLESLVLEHGGDP 62 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH-------------------HHHHHHHHHHHHHcCCCC
Confidence 579999999999999974 4566755 6999999999974 124678888999999999
Q ss_pred eEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHHhccccccccCCCChh
Q 024033 97 TLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASWASSFPRLVVDTKDAP 176 (273)
Q Consensus 97 ~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (273)
++++||||||++++.+|.++|. ++|+++++... ...+.... ... ..+. ..... .
T Consensus 63 ~~lvG~S~Gg~~a~~~a~~~~~---~~vl~~~~~~~-----------~~~~~~~~---~~~-------~~~~-~~~~~-~ 116 (190)
T PRK11071 63 LGLVGSSLGGYYATWLSQCFML---PAVVVNPAVRP-----------FELLTDYL---GEN-------ENPY-TGQQY-V 116 (190)
T ss_pred eEEEEECHHHHHHHHHHHHcCC---CEEEECCCCCH-----------HHHHHHhc---CCc-------cccc-CCCcE-E
Confidence 9999999999999999999993 46777764320 00011000 000 0000 00000 0
Q ss_pred hHHHHHHHHHhcChhhHHHHHHHhcccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCCCeEEEEcCCCCCCCC
Q 024033 177 SVEKFENCLKRMRHEFALPLAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKGKSTVEIIEADGHFPQ 256 (273)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~ 256 (273)
...++.+.+... +..+ +. ..+|+++++|++|.++|++.+..+.+.. +..++++++|..
T Consensus 117 ~~~~~~~d~~~~---------------~~~~-i~-~~~~v~iihg~~De~V~~~~a~~~~~~~----~~~~~~ggdH~f- 174 (190)
T PRK11071 117 LESRHIYDLKVM---------------QIDP-LE-SPDLIWLLQQTGDEVLDYRQAVAYYAAC----RQTVEEGGNHAF- 174 (190)
T ss_pred EcHHHHHHHHhc---------------CCcc-CC-ChhhEEEEEeCCCCcCCHHHHHHHHHhc----ceEEECCCCcch-
Confidence 111222222111 1222 33 6778899999999999999988888743 456789999987
Q ss_pred ccChHHHHHHHHHhhcC
Q 024033 257 LTAHLQLIDVLNKVLGF 273 (273)
Q Consensus 257 ~e~p~~~~~~i~~fl~~ 273 (273)
+..+...+.|.+|+++
T Consensus 175 -~~~~~~~~~i~~fl~~ 190 (190)
T PRK11071 175 -VGFERYFNQIVDFLGL 190 (190)
T ss_pred -hhHHHhHHHHHHHhcC
Confidence 5558899999999864
No 55
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.90 E-value=5.9e-22 Score=172.67 Aligned_cols=240 Identities=14% Similarity=0.182 Sum_probs=141.4
Q ss_pred CceEEEecCCCCChhch-----hhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHH-----HHHHH
Q 024033 21 KETLVLAHGFGGDQSIW-----DKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADD-----LITLL 89 (273)
Q Consensus 21 ~~~vvllHG~~~~~~~w-----~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~-----l~~~~ 89 (273)
++|||++||+..++..| +.++..|.+ +|+|+++|++|+|.|+.. + ++++++.+ +..+.
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~----------~-~~~d~~~~~~~~~v~~l~ 130 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY----------L-TLDDYINGYIDKCVDYIC 130 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc----------C-CHHHHHHHHHHHHHHHHH
Confidence 45799999987666554 578999987 799999999999987332 1 25555433 33455
Q ss_pred HHcCCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCC-hhhHHHHHHHH--------HHhHHH
Q 024033 90 EENDLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFE-PSDIENLISNV--------ETNYAS 160 (273)
Q Consensus 90 ~~~~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--------~~~~~~ 160 (273)
+..+.++++++||||||++++.+++.+|++|+++|++++.............+. ....+...... ...+..
T Consensus 131 ~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~ 210 (350)
T TIGR01836 131 RTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTMGNIPGELLNLTFLM 210 (350)
T ss_pred HHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHHHHHhcCCCCHHHHHHHHHh
Confidence 566888999999999999999999999999999999987543211111000000 00011100000 000000
Q ss_pred ------HhccccccccCCCChhhHHHHHHH--HHhcC----hhhHHHHHHHhccc-----------ccccccCCCCCCEE
Q 024033 161 ------WASSFPRLVVDTKDAPSVEKFENC--LKRMR----HEFALPLAKTVFYS-----------DEREILDKVETPCT 217 (273)
Q Consensus 161 ------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~-----------~~~~~l~~i~~P~l 217 (273)
....+.........++..+.+.+. +.... ......+.+.++.. +....++++++|++
T Consensus 211 l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g~~~~~~~~~~l~~i~~Pvl 290 (350)
T TIGR01836 211 LKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLINGEVEIGGRKVDLKNIKMPIL 290 (350)
T ss_pred cCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCCeeEECCEEccHHhCCCCeE
Confidence 000000000000111122222111 10100 11111222221111 11234778999999
Q ss_pred EEecCCCCccchhHHHHHHHHcCCC-eEEEEcCCCCCCCCccCh---HHHHHHHHHhhc
Q 024033 218 IFQPSNDAVVPNSVAYYMQEKMKGK-STVEIIEADGHFPQLTAH---LQLIDVLNKVLG 272 (273)
Q Consensus 218 ii~G~~D~~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p---~~~~~~i~~fl~ 272 (273)
+++|++|.++|+...+.+.+.+++. .++++++ +||+.++..+ +++.+.|.+||+
T Consensus 291 iv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~ 348 (350)
T TIGR01836 291 NIYAERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQ 348 (350)
T ss_pred EEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHH
Confidence 9999999999999999988888742 4666666 7999988765 788888888874
No 56
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.89 E-value=1.2e-21 Score=173.58 Aligned_cols=211 Identities=13% Similarity=0.116 Sum_probs=136.2
Q ss_pred CceEEEecCCCCC-hhchhhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHc---CCC
Q 024033 21 KETLVLAHGFGGD-QSIWDKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEEN---DLK 95 (273)
Q Consensus 21 ~~~vvllHG~~~~-~~~w~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~---~~~ 95 (273)
.|.||+.||+.+. ...|..+.+.|.+ +|+|+++|+||||.|.... . ... .....+++.+++... +.+
T Consensus 194 ~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~----~---~~d-~~~~~~avld~l~~~~~vd~~ 265 (414)
T PRK05077 194 FPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWK----L---TQD-SSLLHQAVLNALPNVPWVDHT 265 (414)
T ss_pred ccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCC----c---ccc-HHHHHHHHHHHHHhCcccCcc
Confidence 3555665666654 3678888889877 7999999999999984311 0 112 455556777777665 567
Q ss_pred ceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhH-HHHhccccccccCCCC
Q 024033 96 STLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNY-ASWASSFPRLVVDTKD 174 (273)
Q Consensus 96 ~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 174 (273)
++.++||||||.+++.+|..+|++|+++|++++..... +..... ...+...+ ..+...+. ....
T Consensus 266 ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~--------~~~~~~---~~~~p~~~~~~la~~lg---~~~~- 330 (414)
T PRK05077 266 RVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTL--------LTDPKR---QQQVPEMYLDVLASRLG---MHDA- 330 (414)
T ss_pred cEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchh--------hcchhh---hhhchHHHHHHHHHHhC---CCCC-
Confidence 89999999999999999999999999999998653211 000000 00000000 00000000 0000
Q ss_pred hhhHHHHHHHHHhcChhhHHHHHHHhcccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCCCeEEEEcCCCCCC
Q 024033 175 APSVEKFENCLKRMRHEFALPLAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKGKSTVEIIEADGHF 254 (273)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~ 254 (273)
..+.+...+.... .........++++|+|+|+|++|.++|++..+.+++..++ .++++++++
T Consensus 331 --~~~~l~~~l~~~s------------l~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~-~~l~~i~~~--- 392 (414)
T PRK05077 331 --SDEALRVELNRYS------------LKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSAD-GKLLEIPFK--- 392 (414)
T ss_pred --ChHHHHHHhhhcc------------chhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCC-CeEEEccCC---
Confidence 1111111111100 0000001257899999999999999999999988888875 589999986
Q ss_pred CCccChHHHHHHHHHhhc
Q 024033 255 PQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 255 ~~~e~p~~~~~~i~~fl~ 272 (273)
++.+.++.+.+.|.+||.
T Consensus 393 ~~~e~~~~~~~~i~~wL~ 410 (414)
T PRK05077 393 PVYRNFDKALQEISDWLE 410 (414)
T ss_pred CccCCHHHHHHHHHHHHH
Confidence 677899999999999984
No 57
>PRK10566 esterase; Provisional
Probab=99.87 E-value=1.8e-20 Score=155.68 Aligned_cols=225 Identities=20% Similarity=0.232 Sum_probs=129.9
Q ss_pred ccccccccccceEEe--cC---CCceEEEecCCCCChhchhhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCccc-
Q 024033 3 IREQGLSAAMNAKII--GS---GKETLVLAHGFGGDQSIWDKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKY- 75 (273)
Q Consensus 3 ~~~~~~~~~~~~~~~--G~---~~~~vvllHG~~~~~~~w~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~- 75 (273)
|+........++... |. ..|+||++||++++...|..+...|.+ +|+|+++|+||||.|.......... ..+
T Consensus 4 ~~~~~~~~~~~~~~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~-~~~~ 82 (249)
T PRK10566 4 IETRELAGIEVLHAFPAGQRDTPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLN-HFWQ 82 (249)
T ss_pred EEEEEecCcceEEEcCCCCCCCCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchh-hHHH
Confidence 444444444444433 22 246899999999999999999999987 7999999999999762221000000 000
Q ss_pred ---ccHHHHHHHHHHHHHH--cCCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHH
Q 024033 76 ---SSYEAFADDLITLLEE--NDLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENL 150 (273)
Q Consensus 76 ---~s~~~~a~~l~~~~~~--~~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (273)
.+.+++.+.+..+.+. .+.+++.++||||||.+++.++.++|+...+++++++.. ....
T Consensus 83 ~~~~~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~----------------~~~~ 146 (249)
T PRK10566 83 ILLQNMQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGY----------------FTSL 146 (249)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHH----------------HHHH
Confidence 1123333333333332 244689999999999999999999987544444443210 0000
Q ss_pred HHHHHHhHHHHhccccccccCCCChhhHHHHHHHHHhcChhhHHHHHHHhcccccccccCCC-CCCEEEEecCCCCccch
Q 024033 151 ISNVETNYASWASSFPRLVVDTKDAPSVEKFENCLKRMRHEFALPLAKTVFYSDEREILDKV-ETPCTIFQPSNDAVVPN 229 (273)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~P~lii~G~~D~~~~~ 229 (273)
.. . . +.+... . .+.....+.... ......+....+.++ ++|+++++|++|.++|+
T Consensus 147 ~~----~---~---~~~~~~-~-~~~~~~~~~~~~------------~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~ 202 (249)
T PRK10566 147 AR----T---L---FPPLIP-E-TAAQQAEFNNIV------------APLAEWEVTHQLEQLADRPLLLWHGLADDVVPA 202 (249)
T ss_pred HH----H---h---cccccc-c-ccccHHHHHHHH------------HHHhhcChhhhhhhcCCCCEEEEEcCCCCcCCH
Confidence 00 0 0 000000 0 000001110000 000011222345565 79999999999999999
Q ss_pred hHHHHHHHHcCCC-----eEEEEcCCCCCCCCccChHHHHHHHHHhhc
Q 024033 230 SVAYYMQEKMKGK-----STVEIIEADGHFPQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 230 ~~~~~~~~~~~~~-----~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 272 (273)
...+.+.+.++.. .++.+++++||... |+ ..+.+.+||+
T Consensus 203 ~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~---~~-~~~~~~~fl~ 246 (249)
T PRK10566 203 AESLRLQQALRERGLDKNLTCLWEPGVRHRIT---PE-ALDAGVAFFR 246 (249)
T ss_pred HHHHHHHHHHHhcCCCcceEEEecCCCCCccC---HH-HHHHHHHHHH
Confidence 9888888877531 36678899999864 43 4566666663
No 58
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.86 E-value=3.9e-20 Score=180.50 Aligned_cols=258 Identities=12% Similarity=0.119 Sum_probs=150.9
Q ss_pred cccccccccceEEec------CCCceEEEecCCCCChhchhhh-----hhhhhc-CceEEEEecCCCccccCCCCCCCCC
Q 024033 4 REQGLSAAMNAKIIG------SGKETLVLAHGFGGDQSIWDKI-----TPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYN 71 (273)
Q Consensus 4 ~~~~~~~~~~~~~~G------~~~~~vvllHG~~~~~~~w~~~-----~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~ 71 (273)
-+.++...++|.-.. ..++||||+|||+.+...|+.+ ++.|.+ +|+|+++|+ |.|+.+. ..
T Consensus 44 ~~~~~~~l~~y~~~~~~~~~~~~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~---~~- 116 (994)
T PRK07868 44 ESVPMYRLRRYFPPDNRPGQPPVGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVE---GG- 116 (994)
T ss_pred EEcCcEEEEEeCCCCccccccCCCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhH---cC-
Confidence 345555666774321 2347899999999999999876 788866 799999994 6664432 00
Q ss_pred CcccccHHHHHHHHHHHHHH---cCCCceEEEEEChhHHHHHHHHhhC-cccccceEEeecCCCccCC--CCCCC-----
Q 024033 72 PVKYSSYEAFADDLITLLEE---NDLKSTLFIGHSMSGMIGCIASVKK-PELFKRLILIGTSPRYINT--DDYEG----- 140 (273)
Q Consensus 72 ~~~~~s~~~~a~~l~~~~~~---~~~~~~~lvGhS~GG~ia~~~a~~~-p~~v~~lvl~~~~~~~~~~--~~~~~----- 140 (273)
.. .++++++..+.+.++. +..++++|+||||||++++.+++.+ |++|+++|+++++..+... .....
T Consensus 117 -~~-~~l~~~i~~l~~~l~~v~~~~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~ 194 (994)
T PRK07868 117 -ME-RNLADHVVALSEAIDTVKDVTGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAA 194 (994)
T ss_pred -cc-CCHHHHHHHHHHHHHHHHHhhCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhc
Confidence 11 2488888777777764 4557899999999999998888754 5689999998876432110 00000
Q ss_pred --CCC----------hhhHHHH-HHHHHH--hHHHHhccccccccCCC--C-hhhHHHHHHHH--HhcChhhHHHHHHHh
Q 024033 141 --GFE----------PSDIENL-ISNVET--NYASWASSFPRLVVDTK--D-APSVEKFENCL--KRMRHEFALPLAKTV 200 (273)
Q Consensus 141 --~~~----------~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~--~~~~~~~~~~~~~~~ 200 (273)
.+. +..+... ...+.. ....+...+ ..+.++. . ++....+.... ..........+.+.+
T Consensus 195 ~~~~~~~~~~~~~~~p~~~~~~~~~~l~p~~~~~~~~~~~-~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~ 273 (994)
T PRK07868 195 AADFMADHVFNRLDIPGWMARTGFQMLDPVKTAKARVDFL-RQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQF 273 (994)
T ss_pred ccccchhhhhhcCCCCHHHHHHHHHhcChhHHHHHHHHHH-HhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHH
Confidence 000 0000000 000000 000000000 0001110 0 01111111111 011111112222222
Q ss_pred cc-----------cccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCCCeEE-EEcCCCCCCCCc---cChHHHHH
Q 024033 201 FY-----------SDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKGKSTV-EIIEADGHFPQL---TAHLQLID 265 (273)
Q Consensus 201 ~~-----------~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~-~~i~~~gH~~~~---e~p~~~~~ 265 (273)
.. .+....+++|++|+++|+|++|.++|++..+.+++.+++ .++ ++++++||+.++ ..|+++..
T Consensus 274 ~~~n~~~~g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~-a~~~~~~~~~GH~g~~~g~~a~~~~wp 352 (994)
T PRK07868 274 IAHNRMMTGGFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAAPN-AEVYESLIRAGHFGLVVGSRAAQQTWP 352 (994)
T ss_pred HHhCcccCceEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC-CeEEEEeCCCCCEeeeechhhhhhhCh
Confidence 11 011135889999999999999999999999999999986 466 677999999877 46677777
Q ss_pred HHHHhhc
Q 024033 266 VLNKVLG 272 (273)
Q Consensus 266 ~i~~fl~ 272 (273)
.|.+||+
T Consensus 353 ~i~~wl~ 359 (994)
T PRK07868 353 TVADWVK 359 (994)
T ss_pred HHHHHHH
Confidence 7877774
No 59
>PRK13604 luxD acyl transferase; Provisional
Probab=99.86 E-value=7e-20 Score=153.34 Aligned_cols=199 Identities=16% Similarity=0.183 Sum_probs=122.6
Q ss_pred ceEEEecCCCCChhchhhhhhhhhc-CceEEEEecCCC-ccccCCCCCCCCCCcccccHHHHHHHH---HHHHHHcCCCc
Q 024033 22 ETLVLAHGFGGDQSIWDKITPVLSQ-HYRVLAFDWLFS-GAILNKDHQSLYNPVKYSSYEAFADDL---ITLLEENDLKS 96 (273)
Q Consensus 22 ~~vvllHG~~~~~~~w~~~~~~L~~-~~~via~D~~G~-G~S~~~~~~~~~~~~~~~s~~~~a~~l---~~~~~~~~~~~ 96 (273)
++||+.||++.+...+..++.+|.+ +|.|+.+|.+|| |.|+ +. +.... +....+|+ .++++..+.++
T Consensus 38 ~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~-G~----~~~~t---~s~g~~Dl~aaid~lk~~~~~~ 109 (307)
T PRK13604 38 NTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSS-GT----IDEFT---MSIGKNSLLTVVDWLNTRGINN 109 (307)
T ss_pred CEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCC-Cc----cccCc---ccccHHHHHHHHHHHHhcCCCc
Confidence 6799999999988778999999988 899999999998 8883 32 11111 22224555 55555557778
Q ss_pred eEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHHhccccccccCCC---
Q 024033 97 TLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASWASSFPRLVVDTK--- 173 (273)
Q Consensus 97 ~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 173 (273)
+.|+||||||.+|+..|... .++++|+.++.... ...+++ .+...+. .+........
T Consensus 110 I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l-----------~d~l~~---~~~~~~~----~~p~~~lp~~~d~ 169 (307)
T PRK13604 110 LGLIAASLSARIAYEVINEI--DLSFLITAVGVVNL-----------RDTLER---ALGYDYL----SLPIDELPEDLDF 169 (307)
T ss_pred eEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccH-----------HHHHHH---hhhcccc----cCccccccccccc
Confidence 99999999999987776643 38888876653210 001111 0000000 0000000000
Q ss_pred --ChhhHHHHHHHHHhcChhhHHHHHHHhcccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcC-CCeEEEEcCC
Q 024033 174 --DAPSVEKFENCLKRMRHEFALPLAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMK-GKSTVEIIEA 250 (273)
Q Consensus 174 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~ 250 (273)
.......+.+...+.+... .....+..+++++|+|+|+|++|.++|+..++.+.+.++ +.++++++++
T Consensus 170 ~g~~l~~~~f~~~~~~~~~~~---------~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~G 240 (307)
T PRK13604 170 EGHNLGSEVFVTDCFKHGWDT---------LDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIG 240 (307)
T ss_pred ccccccHHHHHHHHHhcCccc---------cccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCC
Confidence 0000112222221111110 001123466788999999999999999999999888775 3478999999
Q ss_pred CCCCCCc
Q 024033 251 DGHFPQL 257 (273)
Q Consensus 251 ~gH~~~~ 257 (273)
++|....
T Consensus 241 a~H~l~~ 247 (307)
T PRK13604 241 SSHDLGE 247 (307)
T ss_pred CccccCc
Confidence 9998754
No 60
>PLN02872 triacylglycerol lipase
Probab=99.86 E-value=4.6e-20 Score=161.73 Aligned_cols=250 Identities=12% Similarity=0.115 Sum_probs=139.9
Q ss_pred CceEEEecCCCCChhchhh------hhhhhhc-CceEEEEecCCCccccCCCCCC--CCCCcccccHHHHH-HHHHHHHH
Q 024033 21 KETLVLAHGFGGDQSIWDK------ITPVLSQ-HYRVLAFDWLFSGAILNKDHQS--LYNPVKYSSYEAFA-DDLITLLE 90 (273)
Q Consensus 21 ~~~vvllHG~~~~~~~w~~------~~~~L~~-~~~via~D~~G~G~S~~~~~~~--~~~~~~~~s~~~~a-~~l~~~~~ 90 (273)
+++|||+||++.++..|.. +...|++ +|+|+++|+||+|.|......+ ....+.++ +++++ .|+.++++
T Consensus 74 ~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s-~~e~a~~Dl~a~id 152 (395)
T PLN02872 74 GPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWS-WQELALYDLAEMIH 152 (395)
T ss_pred CCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccccCCCCCCccchhccCCc-HHHHHHHHHHHHHH
Confidence 5789999999999999953 3335766 8999999999998763211000 00112344 88888 78999888
Q ss_pred Hc---CCCceEEEEEChhHHHHHHHHhhCcc---cccceEEeecCCCccCCCC-CCCCCChhhHHHHHHHH------HH-
Q 024033 91 EN---DLKSTLFIGHSMSGMIGCIASVKKPE---LFKRLILIGTSPRYINTDD-YEGGFEPSDIENLISNV------ET- 156 (273)
Q Consensus 91 ~~---~~~~~~lvGhS~GG~ia~~~a~~~p~---~v~~lvl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~~- 156 (273)
.+ ..+++++|||||||.+++. +..+|+ +|++++++++.....+... +........+..++..+ ..
T Consensus 153 ~i~~~~~~~v~~VGhS~Gg~~~~~-~~~~p~~~~~v~~~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 231 (395)
T PLN02872 153 YVYSITNSKIFIVGHSQGTIMSLA-ALTQPNVVEMVEAAALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRS 231 (395)
T ss_pred HHHhccCCceEEEEECHHHHHHHH-HhhChHHHHHHHHHHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCc
Confidence 75 3478999999999999984 446787 6888888876432211100 00000000000000000 00
Q ss_pred -hHHHHhccccc----------cccCCC--------------Ch--hhHHHHHHHHHhcChhhHHHH------HHHhccc
Q 024033 157 -NYASWASSFPR----------LVVDTK--------------DA--PSVEKFENCLKRMRHEFALPL------AKTVFYS 203 (273)
Q Consensus 157 -~~~~~~~~~~~----------~~~~~~--------------~~--~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 203 (273)
....+...+.. .+.+.+ .| ..++.+.......+...+..+ ....+..
T Consensus 232 ~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~ 311 (395)
T PLN02872 232 DVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQ 311 (395)
T ss_pred HHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCC
Confidence 00000000000 000100 00 011111111100000000000 0000000
Q ss_pred cccc--ccCCC--CCCEEEEecCCCCccchhHHHHHHHHcCCCeEEEEcCCCCCC---CCccChHHHHHHHHHhhc
Q 024033 204 DERE--ILDKV--ETPCTIFQPSNDAVVPNSVAYYMQEKMKGKSTVEIIEADGHF---PQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 204 ~~~~--~l~~i--~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~---~~~e~p~~~~~~i~~fl~ 272 (273)
..-+ .+.+| ++|+++++|++|.+++++..+.+.+.++...+++.++++||. ...++|+.+.+.|.+|++
T Consensus 312 ~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~ 387 (395)
T PLN02872 312 VNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFR 387 (395)
T ss_pred CCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHH
Confidence 0000 25666 689999999999999998888888888854578889999995 556999999999999974
No 61
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.84 E-value=4.7e-20 Score=148.37 Aligned_cols=101 Identities=25% Similarity=0.353 Sum_probs=82.7
Q ss_pred CCceEEEecCCCCChhchhhhhhhhhc--CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHc---CC
Q 024033 20 GKETLVLAHGFGGDQSIWDKITPVLSQ--HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEEN---DL 94 (273)
Q Consensus 20 ~~~~vvllHG~~~~~~~w~~~~~~L~~--~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~---~~ 94 (273)
.+|.++|+||.+.++-.|..+...|.. +.+|+|+|+||||.| +-. +... .|.+.++.|+-++++.+ ..
T Consensus 73 ~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeT-k~~-----~e~d-lS~eT~~KD~~~~i~~~fge~~ 145 (343)
T KOG2564|consen 73 EGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGET-KVE-----NEDD-LSLETMSKDFGAVIKELFGELP 145 (343)
T ss_pred CccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCcc-ccC-----Chhh-cCHHHHHHHHHHHHHHHhccCC
Confidence 457899999999999999999999977 688999999999998 321 1122 35999999999999886 34
Q ss_pred CceEEEEEChhHHHHHHHHh--hCcccccceEEeec
Q 024033 95 KSTLFIGHSMSGMIGCIASV--KKPELFKRLILIGT 128 (273)
Q Consensus 95 ~~~~lvGhS~GG~ia~~~a~--~~p~~v~~lvl~~~ 128 (273)
++++||||||||.|+.+.|. .-|. +.+|+++|-
T Consensus 146 ~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDV 180 (343)
T KOG2564|consen 146 PQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDV 180 (343)
T ss_pred CceEEEeccccchhhhhhhhhhhchh-hhceEEEEE
Confidence 67999999999999976654 4666 899999985
No 62
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.81 E-value=9.9e-18 Score=141.09 Aligned_cols=258 Identities=19% Similarity=0.319 Sum_probs=170.6
Q ss_pred ccceEEecC----CCceEEEecCCCCCh---h--------chhhhh-h--hhhc-CceEEEEecCCCc-cccCCCCCCCC
Q 024033 11 AMNAKIIGS----GKETLVLAHGFGGDQ---S--------IWDKIT-P--VLSQ-HYRVLAFDWLFSG-AILNKDHQSLY 70 (273)
Q Consensus 11 ~~~~~~~G~----~~~~vvllHG~~~~~---~--------~w~~~~-~--~L~~-~~~via~D~~G~G-~S~~~~~~~~~ 70 (273)
.+.|+.+|. ....||.+||+++++ . -|+.++ + .+.. +|-||+.|..|.. .|+.|.. .
T Consensus 37 ~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s---~ 113 (368)
T COG2021 37 RVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSS---I 113 (368)
T ss_pred EEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCC---c
Confidence 357788883 234799999999854 2 344443 2 2555 6999999999998 4545531 1
Q ss_pred CCc---------ccccHHHHHHHHHHHHHHcCCCce-EEEEEChhHHHHHHHHhhCcccccceEEeecCCCccC------
Q 024033 71 NPV---------KYSSYEAFADDLITLLEENDLKST-LFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYIN------ 134 (273)
Q Consensus 71 ~~~---------~~~s~~~~a~~l~~~~~~~~~~~~-~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~------ 134 (273)
++. .+ |+.|++..-..++++||++++ .+||-|||||-++++++.||++|.+++.++++++...
T Consensus 114 ~p~g~~yg~~FP~~-ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia~~ 192 (368)
T COG2021 114 NPGGKPYGSDFPVI-TIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIAFN 192 (368)
T ss_pred CCCCCccccCCCcc-cHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHHHH
Confidence 222 24 499999999999999999996 5999999999999999999999999999998654321
Q ss_pred ---------CCCCCCC-----CChh---hHHHHHHHHH-HhHHHHhcccccccc-----CCCChhhHHHHHH-----HHH
Q 024033 135 ---------TDDYEGG-----FEPS---DIENLISNVE-TNYASWASSFPRLVV-----DTKDAPSVEKFEN-----CLK 186 (273)
Q Consensus 135 ---------~~~~~~~-----~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-----~~~ 186 (273)
+.+|..+ -.+. .+.+++..+. .....|...|..... .......++.|.+ ...
T Consensus 193 ~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~~ 272 (368)
T COG2021 193 EVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFVA 272 (368)
T ss_pred HHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHHHh
Confidence 1112111 1111 1222222211 111233333332110 0000112333322 233
Q ss_pred hcChhhHHHHHHHhcccc-------cccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCCCeEEEEc-CCCCCCCCcc
Q 024033 187 RMRHEFALPLAKTVFYSD-------EREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKGKSTVEII-EADGHFPQLT 258 (273)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~-------~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i-~~~gH~~~~e 258 (273)
++++++...+.+.+-..| +...|++|++|++++.=+.|..+|++..+.+++.++....+.+| ...||--++.
T Consensus 273 rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i~S~~GHDaFL~ 352 (368)
T COG2021 273 RFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGALREIDSPYGHDAFLV 352 (368)
T ss_pred ccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCceEEecCCCCchhhhc
Confidence 567777777766654444 33458999999999999999999999999999998864325555 4479999999
Q ss_pred ChHHHHHHHHHhhc
Q 024033 259 AHLQLIDVLNKVLG 272 (273)
Q Consensus 259 ~p~~~~~~i~~fl~ 272 (273)
..+.+...|+.||+
T Consensus 353 e~~~~~~~i~~fL~ 366 (368)
T COG2021 353 ESEAVGPLIRKFLA 366 (368)
T ss_pred chhhhhHHHHHHhh
Confidence 99999999999985
No 63
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.81 E-value=6.9e-19 Score=133.77 Aligned_cols=144 Identities=28% Similarity=0.476 Sum_probs=110.3
Q ss_pred eEEEecCCCCChhchhhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCCCceEEEE
Q 024033 23 TLVLAHGFGGDQSIWDKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDLKSTLFIG 101 (273)
Q Consensus 23 ~vvllHG~~~~~~~w~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~~~~~lvG 101 (273)
+||++||++++...|..+...|.+ +|.|+++|+||+|.+... ...+++.+++. .+..+.+++.|+|
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~-----------~~~~~~~~~~~--~~~~~~~~i~l~G 67 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDGA-----------DAVERVLADIR--AGYPDPDRIILIG 67 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHHS-----------HHHHHHHHHHH--HHHCTCCEEEEEE
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccchh-----------HHHHHHHHHHH--hhcCCCCcEEEEE
Confidence 589999999999999999999988 799999999999987211 12333444333 1123678899999
Q ss_pred EChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHHhccccccccCCCChhhHHHH
Q 024033 102 HSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASWASSFPRLVVDTKDAPSVEKF 181 (273)
Q Consensus 102 hS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (273)
||+||.+++.++.++ .+++++|++++.+.
T Consensus 68 ~S~Gg~~a~~~~~~~-~~v~~~v~~~~~~~-------------------------------------------------- 96 (145)
T PF12695_consen 68 HSMGGAIAANLAARN-PRVKAVVLLSPYPD-------------------------------------------------- 96 (145)
T ss_dssp ETHHHHHHHHHHHHS-TTESEEEEESESSG--------------------------------------------------
T ss_pred EccCcHHHHHHhhhc-cceeEEEEecCccc--------------------------------------------------
Confidence 999999999999988 68999999865100
Q ss_pred HHHHHhcChhhHHHHHHHhcccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCCCeEEEEcCCCCCC
Q 024033 182 ENCLKRMRHEFALPLAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKGKSTVEIIEADGHF 254 (273)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~ 254 (273)
.+.+.+.++|+++++|++|..++++..+.+.+.++..+++.++++++|+
T Consensus 97 ------------------------~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 97 ------------------------SEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp ------------------------CHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred ------------------------hhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 0001122349999999999999999988888888755799999999996
No 64
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.79 E-value=1.9e-17 Score=132.09 Aligned_cols=223 Identities=17% Similarity=0.196 Sum_probs=144.4
Q ss_pred CceEEEecCCCCChhchhhhhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHH-HcCCCceEE
Q 024033 21 KETLVLAHGFGGDQSIWDKITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLE-ENDLKSTLF 99 (273)
Q Consensus 21 ~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~-~~~~~~~~l 99 (273)
+..++|+|=.|+++..|+.+...|.....++++++||+|.-- ..+..++++.+|+++..-+. -.--+++.|
T Consensus 7 ~~~L~cfP~AGGsa~~fr~W~~~lp~~iel~avqlPGR~~r~--------~ep~~~di~~Lad~la~el~~~~~d~P~al 78 (244)
T COG3208 7 RLRLFCFPHAGGSASLFRSWSRRLPADIELLAVQLPGRGDRF--------GEPLLTDIESLADELANELLPPLLDAPFAL 78 (244)
T ss_pred CceEEEecCCCCCHHHHHHHHhhCCchhheeeecCCCccccc--------CCcccccHHHHHHHHHHHhccccCCCCeee
Confidence 357999999999999999999999999999999999998641 11224569999999998777 344467999
Q ss_pred EEEChhHHHHHHHHhhCc---ccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHHhccccccccCCCChh
Q 024033 100 IGHSMSGMIGCIASVKKP---ELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASWASSFPRLVVDTKDAP 176 (273)
Q Consensus 100 vGhS~GG~ia~~~a~~~p---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (273)
+||||||++|.++|.+.. ....++.+.+..+..... ........+ ..++..+.. . ....+.++. .
T Consensus 79 fGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~--~~~i~~~~D-~~~l~~l~~----l-gG~p~e~le--d-- 146 (244)
T COG3208 79 FGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDR--GKQIHHLDD-ADFLADLVD----L-GGTPPELLE--D-- 146 (244)
T ss_pred cccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcc--cCCccCCCH-HHHHHHHHH----h-CCCChHHhc--C--
Confidence 999999999999997532 235567766654321111 100011111 112221111 0 000111110 1
Q ss_pred hHHHHHHHHH-hcChhhHHHHHHHhcccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCCCeEEEEcCCCCCCC
Q 024033 177 SVEKFENCLK-RMRHEFALPLAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKGKSTVEIIEADGHFP 255 (273)
Q Consensus 177 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~ 255 (273)
.++...+. ..+.+. ..... -....-..++||+..+.|++|..++.+....+.+..++.-++.+++ +||+.
T Consensus 147 --~El~~l~LPilRAD~--~~~e~----Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fd-GgHFf 217 (244)
T COG3208 147 --PELMALFLPILRADF--RALES----YRYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFD-GGHFF 217 (244)
T ss_pred --HHHHHHHHHHHHHHH--HHhcc----cccCCCCCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEec-Cccee
Confidence 11221111 111111 11111 0111225789999999999999999988888888887666899998 69999
Q ss_pred CccChHHHHHHHHHhhc
Q 024033 256 QLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 256 ~~e~p~~~~~~i~~fl~ 272 (273)
..++.+++...|++.++
T Consensus 218 l~~~~~~v~~~i~~~l~ 234 (244)
T COG3208 218 LNQQREEVLARLEQHLA 234 (244)
T ss_pred hhhhHHHHHHHHHHHhh
Confidence 99999999999988763
No 65
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.77 E-value=4.2e-18 Score=141.59 Aligned_cols=101 Identities=13% Similarity=0.192 Sum_probs=81.8
Q ss_pred CceEEEecCCCCC----hhchhhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHH---HHHHc
Q 024033 21 KETLVLAHGFGGD----QSIWDKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLIT---LLEEN 92 (273)
Q Consensus 21 ~~~vvllHG~~~~----~~~w~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~---~~~~~ 92 (273)
+++|||+||++.+ ...|..+...|++ +|+|+++|+||||.|+... ..+ +++.+++|+.. ++++.
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~-------~~~-~~~~~~~Dv~~ai~~L~~~ 96 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDF-------AAA-RWDVWKEDVAAAYRWLIEQ 96 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcc-------ccC-CHHHHHHHHHHHHHHHHhc
Confidence 4579999999864 3567778899986 8999999999999994321 112 37777777665 45566
Q ss_pred CCCceEEEEEChhHHHHHHHHhhCcccccceEEeecC
Q 024033 93 DLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTS 129 (273)
Q Consensus 93 ~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~ 129 (273)
+.++++|+||||||.+++.+|.++|++++++|++++.
T Consensus 97 ~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~ 133 (266)
T TIGR03101 97 GHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPV 133 (266)
T ss_pred CCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccc
Confidence 7789999999999999999999999999999999753
No 66
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.75 E-value=1.6e-16 Score=130.66 Aligned_cols=244 Identities=16% Similarity=0.179 Sum_probs=146.4
Q ss_pred cccceEEecC-C--CceEEEecCCCCChhc-hhhh-----hhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHH
Q 024033 10 AAMNAKIIGS-G--KETLVLAHGFGGDQSI-WDKI-----TPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEA 80 (273)
Q Consensus 10 ~~~~~~~~G~-~--~~~vvllHG~~~~~~~-w~~~-----~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~ 80 (273)
+.+++.+.|. . +|+||=.|=.|.|... |..+ ...+.++|-++-+|.|||..-....+. . -.|.|+++
T Consensus 9 G~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~-~---y~yPsmd~ 84 (283)
T PF03096_consen 9 GSVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLPE-G---YQYPSMDQ 84 (283)
T ss_dssp EEEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----T-T--------HHH
T ss_pred eEEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhceEEEEEeCCCCCCCcccccc-c---ccccCHHH
Confidence 4567788884 3 6889999999998755 6544 455777899999999999875332211 1 13778999
Q ss_pred HHHHHHHHHHHcCCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHH-----
Q 024033 81 FADDLITLLEENDLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVE----- 155 (273)
Q Consensus 81 ~a~~l~~~~~~~~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 155 (273)
+|+++.+++++++++.++-+|--.|+.|-..+|.+||++|.+|||+++.+....+ .+.+...+.
T Consensus 85 LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw-----------~Ew~~~K~~~~~L~ 153 (283)
T PF03096_consen 85 LAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGW-----------MEWFYQKLSSWLLY 153 (283)
T ss_dssp HHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---H-----------HHHHHHHHH-----
T ss_pred HHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccH-----------HHHHHHHHhccccc
Confidence 9999999999999999999999999999999999999999999999986532111 111110000
Q ss_pred -----H---hHHHHhccccccccCCCChhhHHHHHHHHHh-cChhhHHHHHHHh-cccccccccCCCCCCEEEEecCCCC
Q 024033 156 -----T---NYASWASSFPRLVVDTKDAPSVEKFENCLKR-MRHEFALPLAKTV-FYSDEREILDKVETPCTIFQPSNDA 225 (273)
Q Consensus 156 -----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~l~~i~~P~lii~G~~D~ 225 (273)
. ++-.| -.|....... ..+.++.+++.+.+ .++.....+.... ..+|+...++...||+|+|.|+..+
T Consensus 154 ~~gmt~~~~d~Ll~-h~Fg~~~~~~-n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp 231 (283)
T PF03096_consen 154 SYGMTSSVKDYLLW-HYFGKEEEEN-NSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSP 231 (283)
T ss_dssp --CTTS-HHHHHHH-HHS-HHHHHC-T-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTST
T ss_pred ccccccchHHhhhh-cccccccccc-cHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCc
Confidence 0 00000 0121111111 12355666666654 3444433343332 3466766778888999999999987
Q ss_pred ccchhHHHHHHHHc-CCCeEEEEcCCCCCCCCccChHHHHHHHHHhhc
Q 024033 226 VVPNSVAYYMQEKM-KGKSTVEIIEADGHFPQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 226 ~~~~~~~~~~~~~~-~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 272 (273)
... .+..+..++ |..+++..+++||=++..|+|+++.+.++-||+
T Consensus 232 ~~~--~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQ 277 (283)
T PF03096_consen 232 HVD--DVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQ 277 (283)
T ss_dssp THH--HHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHH
T ss_pred chh--hHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHc
Confidence 643 344555555 445789999999999999999999999999974
No 67
>PRK11460 putative hydrolase; Provisional
Probab=99.75 E-value=1.6e-16 Score=130.57 Aligned_cols=180 Identities=18% Similarity=0.192 Sum_probs=118.3
Q ss_pred CCCceEEEecCCCCChhchhhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCC------cccccHHHHHHHHHHHH--
Q 024033 19 SGKETLVLAHGFGGDQSIWDKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNP------VKYSSYEAFADDLITLL-- 89 (273)
Q Consensus 19 ~~~~~vvllHG~~~~~~~w~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~------~~~~s~~~~a~~l~~~~-- 89 (273)
+..+.|||+||++++...|.++.+.|.+ .+.+..++.+|...+.......+++. ....++++..+.+.+++
T Consensus 14 ~~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~~ 93 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVRY 93 (232)
T ss_pred CCCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHHH
Confidence 3457899999999999999999999986 34555555666543211100001110 00111333333343333
Q ss_pred --HHcCC--CceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHHhccc
Q 024033 90 --EENDL--KSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASWASSF 165 (273)
Q Consensus 90 --~~~~~--~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (273)
++.++ ++++|+|||+||.+++.++.++|+.+.+++.+++.. .
T Consensus 94 ~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~---~------------------------------- 139 (232)
T PRK11460 94 WQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRY---A------------------------------- 139 (232)
T ss_pred HHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccc---c-------------------------------
Confidence 34444 479999999999999999999998877777653210 0
Q ss_pred cccccCCCChhhHHHHHHHHHhcChhhHHHHHHHhcccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCC---C
Q 024033 166 PRLVVDTKDAPSVEKFENCLKRMRHEFALPLAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKG---K 242 (273)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~---~ 242 (273)
..+. . ...++|+++++|++|.++|.+..+.+.+.+.. .
T Consensus 140 -------~~~~------------~--------------------~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~ 180 (232)
T PRK11460 140 -------SLPE------------T--------------------APTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGD 180 (232)
T ss_pred -------cccc------------c--------------------ccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCC
Confidence 0000 0 01257999999999999999888877776542 2
Q ss_pred eEEEEcCCCCCCCCccChHHHHHHHHHhh
Q 024033 243 STVEIIEADGHFPQLTAHLQLIDVLNKVL 271 (273)
Q Consensus 243 ~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 271 (273)
.++++++++||....+.-+...+.|++++
T Consensus 181 ~~~~~~~~~gH~i~~~~~~~~~~~l~~~l 209 (232)
T PRK11460 181 VTLDIVEDLGHAIDPRLMQFALDRLRYTV 209 (232)
T ss_pred eEEEEECCCCCCCCHHHHHHHHHHHHHHc
Confidence 57888899999998777777777776665
No 68
>PLN02442 S-formylglutathione hydrolase
Probab=99.74 E-value=3.1e-16 Score=132.59 Aligned_cols=216 Identities=12% Similarity=0.142 Sum_probs=125.9
Q ss_pred ccccceEEe------cCCCceEEEecCCCCChhchhhh---hhhhhc-CceEEEEecCCCccccCCCC--------CCCC
Q 024033 9 SAAMNAKII------GSGKETLVLAHGFGGDQSIWDKI---TPVLSQ-HYRVLAFDWLFSGAILNKDH--------QSLY 70 (273)
Q Consensus 9 ~~~~~~~~~------G~~~~~vvllHG~~~~~~~w~~~---~~~L~~-~~~via~D~~G~G~S~~~~~--------~~~~ 70 (273)
...+.|.++ +.+.|.|+|+||++++...|... ...++. ++.|++||..++|.-..... .+.+
T Consensus 29 ~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~ 108 (283)
T PLN02442 29 GCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFY 108 (283)
T ss_pred CCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCccee
Confidence 345556665 33468899999999998888543 345555 79999999987772100000 0000
Q ss_pred ----CC----ccccc--HHHHHHHHHHHHHHcCCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCC
Q 024033 71 ----NP----VKYSS--YEAFADDLITLLEENDLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEG 140 (273)
Q Consensus 71 ----~~----~~~~s--~~~~a~~l~~~~~~~~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 140 (273)
.. .++.+ .+++.+.+.+..+.++.++++++||||||..++.++.++|+++++++.+++.......
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~----- 183 (283)
T PLN02442 109 LNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPINC----- 183 (283)
T ss_pred eccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCcccC-----
Confidence 00 01111 3344444445555567889999999999999999999999999999988764321000
Q ss_pred CCChhhHHHHHHHHHHhHHHHhccccccccCCCChhhHHHHHHHHHhcChhhHHHHHHHhcccccccccCCCCCCEEEEe
Q 024033 141 GFEPSDIENLISNVETNYASWASSFPRLVVDTKDAPSVEKFENCLKRMRHEFALPLAKTVFYSDEREILDKVETPCTIFQ 220 (273)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~ 220 (273)
.+. . . .. ..+ + +.. +.. ....++. .....+.+.++|+++++
T Consensus 184 ~~~---~-~---~~----~~~---~-----g~~-~~~-------~~~~d~~------------~~~~~~~~~~~pvli~~ 224 (283)
T PLN02442 184 PWG---Q-K---AF----TNY---L-----GSD-KAD-------WEEYDAT------------ELVSKFNDVSATILIDQ 224 (283)
T ss_pred chh---h-H---HH----HHH---c-----CCC-hhh-------HHHcChh------------hhhhhccccCCCEEEEE
Confidence 000 0 0 00 000 0 110 000 1001110 01112345689999999
Q ss_pred cCCCCccchh-HHHHHHHH---cCCCeEEEEcCCCCCCCCccChHHHHHHHHHhhcC
Q 024033 221 PSNDAVVPNS-VAYYMQEK---MKGKSTVEIIEADGHFPQLTAHLQLIDVLNKVLGF 273 (273)
Q Consensus 221 G~~D~~~~~~-~~~~~~~~---~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 273 (273)
|++|..++.. ..+.+.+. .....++.++++.+|..+ .+.+.|++++.|
T Consensus 225 G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~~~-----~~~~~i~~~~~~ 276 (283)
T PLN02442 225 GEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHSYF-----FIATFIDDHINH 276 (283)
T ss_pred CCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCccHH-----HHHHHHHHHHHH
Confidence 9999998863 13333322 232368899999999755 566667666654
No 69
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.74 E-value=7.2e-16 Score=125.47 Aligned_cols=231 Identities=21% Similarity=0.250 Sum_probs=140.5
Q ss_pred CceEEEecCCCCChhchhhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCCC-ceE
Q 024033 21 KETLVLAHGFGGDQSIWDKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDLK-STL 98 (273)
Q Consensus 21 ~~~vvllHG~~~~~~~w~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~~-~~~ 98 (273)
..+||-+||-+++...|+.+.+.|.+ +.|+|.+.+||+|.++.+. ...|+ -++-..=+.+++++++++ +.+
T Consensus 35 ~gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~------~~~~~-n~er~~~~~~ll~~l~i~~~~i 107 (297)
T PF06342_consen 35 LGTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYP------DQQYT-NEERQNFVNALLDELGIKGKLI 107 (297)
T ss_pred ceeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCc------ccccC-hHHHHHHHHHHHHHcCCCCceE
Confidence 34899999999999999999999999 8999999999999996543 12355 666777788899999886 579
Q ss_pred EEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhh----HHHHHHHHHHhHHHHhccccccccCCCC
Q 024033 99 FIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSD----IENLISNVETNYASWASSFPRLVVDTKD 174 (273)
Q Consensus 99 lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (273)
++|||.|+-.|+++|..+| ..++++++++... .- .+..+-. +..++..++.......-.+....++-+.
T Consensus 108 ~~gHSrGcenal~la~~~~--~~g~~lin~~G~r-~H----kgIrp~~r~~~i~~l~~~lp~~~~~~i~~~~y~~iG~KV 180 (297)
T PF06342_consen 108 FLGHSRGCENALQLAVTHP--LHGLVLINPPGLR-PH----KGIRPLSRMETINYLYDLLPRFIINAIMYFYYRMIGFKV 180 (297)
T ss_pred EEEeccchHHHHHHHhcCc--cceEEEecCCccc-cc----cCcCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhCeee
Confidence 9999999999999999996 5699999875321 11 1222211 1111111111000000000001111111
Q ss_pred hhhHHHHHHHHHhcChhhHHHHHHHhcccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCC-------------
Q 024033 175 APSVEKFENCLKRMRHEFALPLAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKG------------- 241 (273)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~------------- 241 (273)
... ++....++.+..-.+.. +...-+.+.+-++|+++++|.+|.++-.+...++++.+.+
T Consensus 181 ~~G-eeA~na~r~m~~~df~~------q~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f~~l~Hf~~~~~~see 253 (297)
T PF06342_consen 181 SDG-EEAINAMRSMQNCDFEE------QKEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKFKGLDHFNIEKEISEE 253 (297)
T ss_pred cCh-HHHHHHHHHHHhcCHHH------HHHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHhCCccceeeecCCChh
Confidence 111 11111111110000000 0011223455578999999999998776655554332221
Q ss_pred -------------CeEEEEcCCCCCCCCccChHHHHHHHHHhhc
Q 024033 242 -------------KSTVEIIEADGHFPQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 242 -------------~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 272 (273)
...-+.+.+.||+.+-.+++-+++.+...|+
T Consensus 254 e~~kI~~~f~~~~~~~sv~f~~dgHf~qK~~A~lIA~~i~~mfe 297 (297)
T PF06342_consen 254 EKPKILKSFASGQKGASVFFAKDGHFQQKFRADLIAEAIKKMFE 297 (297)
T ss_pred HHHHHHHHHhcCCceeEEEEecCChHHhHHHHHHHHHHHHHhhC
Confidence 1123456778999999999999999887653
No 70
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.73 E-value=2.7e-15 Score=122.02 Aligned_cols=252 Identities=16% Similarity=0.153 Sum_probs=164.1
Q ss_pred cccceEEecC---CCceEEEecCCCCChhc-hhh-----hhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHH
Q 024033 10 AAMNAKIIGS---GKETLVLAHGFGGDQSI-WDK-----ITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEA 80 (273)
Q Consensus 10 ~~~~~~~~G~---~~~~vvllHG~~~~~~~-w~~-----~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~ 80 (273)
+..|+.++|. ++|.++=.|..+.|... |.. -...+.++|-|+-+|.|||-.- .|.. ...-.|.|+++
T Consensus 32 G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~fcv~HV~~PGqe~g-Ap~~---p~~y~yPsmd~ 107 (326)
T KOG2931|consen 32 GVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEHFCVYHVDAPGQEDG-APSF---PEGYPYPSMDD 107 (326)
T ss_pred ccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhheEEEecCCCccccC-CccC---CCCCCCCCHHH
Confidence 5567888884 35778999999988655 644 3555777899999999999754 2221 11113778999
Q ss_pred HHHHHHHHHHHcCCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHH--HHHH--
Q 024033 81 FADDLITLLEENDLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLIS--NVET-- 156 (273)
Q Consensus 81 ~a~~l~~~~~~~~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-- 156 (273)
+|++|..++++++++.++=+|---|+.|-..+|.+||++|-+|||++..+..-. |......+...+++. .+..
T Consensus 108 LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~g---wiew~~~K~~s~~l~~~Gmt~~~ 184 (326)
T KOG2931|consen 108 LADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKG---WIEWAYNKVSSNLLYYYGMTQGV 184 (326)
T ss_pred HHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCch---HHHHHHHHHHHHHHHhhchhhhH
Confidence 999999999999999999999999999999999999999999999998654211 110000000000000 0000
Q ss_pred -hHHHHhccccccccCCCChhhHHHHHHHHHhc-ChhhHHHHHHHhc-ccccccccC----CCCCCEEEEecCCCCccch
Q 024033 157 -NYASWASSFPRLVVDTKDAPSVEKFENCLKRM-RHEFALPLAKTVF-YSDEREILD----KVETPCTIFQPSNDAVVPN 229 (273)
Q Consensus 157 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~l~----~i~~P~lii~G~~D~~~~~ 229 (273)
++--| -.|.....+. ..+.++++++.+.+. ++.....+..... .+|+..... .++||++++.|+..+.+.
T Consensus 185 ~d~ll~-H~Fg~e~~~~-~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vllvvGd~Sp~~~- 261 (326)
T KOG2931|consen 185 KDYLLA-HHFGKEELGN-NSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVLLVVGDNSPHVS- 261 (326)
T ss_pred HHHHHH-HHhccccccc-cHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEEEEecCCCchhh-
Confidence 00000 1122222222 234567776666543 3333333333322 344433333 566999999999987653
Q ss_pred hHHHHHHHHc-CCCeEEEEcCCCCCCCCccChHHHHHHHHHhhc
Q 024033 230 SVAYYMQEKM-KGKSTVEIIEADGHFPQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 230 ~~~~~~~~~~-~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 272 (273)
..-++..++ |..+.+..+.++|=.+..++|.++.+.++-|++
T Consensus 262 -~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~Flq 304 (326)
T KOG2931|consen 262 -AVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQ 304 (326)
T ss_pred -hhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHc
Confidence 233444444 444678888999999999999999999999874
No 71
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.72 E-value=4.4e-16 Score=131.27 Aligned_cols=109 Identities=19% Similarity=0.236 Sum_probs=77.0
Q ss_pred CceEEEecCCCCChhchhhh--hhhhhc--CceEEEEec--CCCccccCCCC------CCCC-C------CcccccHHHH
Q 024033 21 KETLVLAHGFGGDQSIWDKI--TPVLSQ--HYRVLAFDW--LFSGAILNKDH------QSLY-N------PVKYSSYEAF 81 (273)
Q Consensus 21 ~~~vvllHG~~~~~~~w~~~--~~~L~~--~~~via~D~--~G~G~S~~~~~------~~~~-~------~~~~~s~~~~ 81 (273)
.|+|+|+||++++...|... ...|.+ ++.|++||. +|+|.+..... .+.+ + ...+.....+
T Consensus 42 ~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~ 121 (275)
T TIGR02821 42 VPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYI 121 (275)
T ss_pred CCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHHH
Confidence 47899999999999988542 345543 799999998 55554321100 0000 0 0112313344
Q ss_pred HHHHHHHHHH---cCCCceEEEEEChhHHHHHHHHhhCcccccceEEeecC
Q 024033 82 ADDLITLLEE---NDLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTS 129 (273)
Q Consensus 82 a~~l~~~~~~---~~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~ 129 (273)
++++..++++ ++.++++++||||||.+++.++.++|+++++++++++.
T Consensus 122 ~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 172 (275)
T TIGR02821 122 VQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPI 172 (275)
T ss_pred HHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCc
Confidence 6888888877 35578999999999999999999999999999988764
No 72
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.72 E-value=8.6e-17 Score=141.38 Aligned_cols=104 Identities=14% Similarity=0.241 Sum_probs=80.6
Q ss_pred CCCceEEEecCCCCCh--hchhh-hhhhhh---cCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHc
Q 024033 19 SGKETLVLAHGFGGDQ--SIWDK-ITPVLS---QHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEEN 92 (273)
Q Consensus 19 ~~~~~vvllHG~~~~~--~~w~~-~~~~L~---~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~ 92 (273)
..+|++|+||||+++. ..|.+ +...|. ++|+||++|++|||.|..+. .. .+...+++++.++++.+
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~-------a~-~~t~~vg~~la~lI~~L 110 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPT-------SA-AYTKLVGKDVAKFVNWM 110 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCcc-------cc-ccHHHHHHHHHHHHHHH
Confidence 4568999999998754 45765 555553 26999999999999884332 11 12456666677666654
Q ss_pred ------CCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCC
Q 024033 93 ------DLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSP 130 (273)
Q Consensus 93 ------~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (273)
++++++||||||||.||..++..+|++|.+++++|++.
T Consensus 111 ~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAg 154 (442)
T TIGR03230 111 QEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAG 154 (442)
T ss_pred HHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCC
Confidence 46899999999999999999999999999999999863
No 73
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.70 E-value=6.1e-16 Score=120.30 Aligned_cols=201 Identities=20% Similarity=0.266 Sum_probs=127.2
Q ss_pred CceEEEecCCCCCh--hchhhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCCCc-
Q 024033 21 KETLVLAHGFGGDQ--SIWDKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDLKS- 96 (273)
Q Consensus 21 ~~~vvllHG~~~~~--~~w~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~~~- 96 (273)
...+||+|||-++. ..-..++.+|.+ ++.+..+|++|.|.|+.. ++ |.++...|+||..+++.+....
T Consensus 33 ~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gs-----f~---~Gn~~~eadDL~sV~q~~s~~nr 104 (269)
T KOG4667|consen 33 TEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGS-----FY---YGNYNTEADDLHSVIQYFSNSNR 104 (269)
T ss_pred ceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCc-----cc---cCcccchHHHHHHHHHHhccCce
Confidence 36899999998764 333667788888 899999999999999432 23 2234445799999999875432
Q ss_pred --eEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHHhc--cccccccC-
Q 024033 97 --TLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASWAS--SFPRLVVD- 171 (273)
Q Consensus 97 --~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~- 171 (273)
.+++|||-||.+++.+|.++++ ++-+|-++.... .. ..+. .++...+..|.. .|...-..
T Consensus 105 ~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRyd--l~---------~~I~---eRlg~~~l~~ike~Gfid~~~rk 169 (269)
T KOG4667|consen 105 VVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYD--LK---------NGIN---ERLGEDYLERIKEQGFIDVGPRK 169 (269)
T ss_pred EEEEEEeecCccHHHHHHHHhhcC-chheEEcccccc--hh---------cchh---hhhcccHHHHHHhCCceecCccc
Confidence 4789999999999999999998 555555443211 00 0010 011122222221 12111000
Q ss_pred CCChhh-HHHHHHHHHhcChhhHHHHHHHhcccccccccC--CCCCCEEEEecCCCCccchhHHHHHHHHcCCCeEEEEc
Q 024033 172 TKDAPS-VEKFENCLKRMRHEFALPLAKTVFYSDEREILD--KVETPCTIFQPSNDAVVPNSVAYYMQEKMKGKSTVEII 248 (273)
Q Consensus 172 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i 248 (273)
...+.. .++ . +... ..+|+.+... ..+||+|-++|.+|.++|.+.++++++.+++ .++++|
T Consensus 170 G~y~~rvt~e---S-----------lmdr-Lntd~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~n-H~L~iI 233 (269)
T KOG4667|consen 170 GKYGYRVTEE---S-----------LMDR-LNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPN-HKLEII 233 (269)
T ss_pred CCcCceecHH---H-----------HHHH-HhchhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhccC-CceEEe
Confidence 000000 000 0 0000 1223333333 3489999999999999999999999999997 589999
Q ss_pred CCCCCCCCccCh
Q 024033 249 EADGHFPQLTAH 260 (273)
Q Consensus 249 ~~~gH~~~~e~p 260 (273)
|+|.|.....+-
T Consensus 234 EgADHnyt~~q~ 245 (269)
T KOG4667|consen 234 EGADHNYTGHQS 245 (269)
T ss_pred cCCCcCccchhh
Confidence 999998765443
No 74
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.68 E-value=6.5e-16 Score=124.15 Aligned_cols=187 Identities=18% Similarity=0.212 Sum_probs=126.0
Q ss_pred CceEEEecCCCCChhchhhhhhhhhc--CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHc-C-CCc
Q 024033 21 KETLVLAHGFGGDQSIWDKITPVLSQ--HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEEN-D-LKS 96 (273)
Q Consensus 21 ~~~vvllHG~~~~~~~w~~~~~~L~~--~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~-~-~~~ 96 (273)
.++|++.||.-.+...=..+.-.|+. +++|+.+|+.|+|.|.. . +.+.. ..+-++.+-+.+.+- | .++
T Consensus 60 ~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G-~------psE~n-~y~Di~avye~Lr~~~g~~~~ 131 (258)
T KOG1552|consen 60 HPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSG-K------PSERN-LYADIKAVYEWLRNRYGSPER 131 (258)
T ss_pred ceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCC-C------ccccc-chhhHHHHHHHHHhhcCCCce
Confidence 36899999996655533344444655 68999999999999943 2 11222 444455555655543 3 578
Q ss_pred eEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHHhccccccccCCCChh
Q 024033 97 TLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASWASSFPRLVVDTKDAP 176 (273)
Q Consensus 97 ~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (273)
++|.|+|||....+.+|.++| +.++|+.++-.. - ++-+.. . .....|.+.|
T Consensus 132 Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S---~-----------~rv~~~-~-~~~~~~~d~f----------- 182 (258)
T KOG1552|consen 132 IILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTS---G-----------MRVAFP-D-TKTTYCFDAF----------- 182 (258)
T ss_pred EEEEEecCCchhhhhHhhcCC--cceEEEeccchh---h-----------hhhhcc-C-cceEEeeccc-----------
Confidence 999999999999999999999 899999864210 0 000000 0 0000010000
Q ss_pred hHHHHHHHHHhcChhhHHHHHHHhcccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCCCeEEEEcCCCCCCCC
Q 024033 177 SVEKFENCLKRMRHEFALPLAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKGKSTVEIIEADGHFPQ 256 (273)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~ 256 (273)
. .-+-.+.|+||+++++|++|.+++......+.+..++..+-.++.++||.-.
T Consensus 183 ---------~------------------~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~ 235 (258)
T KOG1552|consen 183 ---------P------------------NIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDI 235 (258)
T ss_pred ---------c------------------ccCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCccc
Confidence 0 0123577899999999999999999999999998876557788899999765
Q ss_pred ccChHHHHHHHHHhhc
Q 024033 257 LTAHLQLIDVLNKVLG 272 (273)
Q Consensus 257 ~e~p~~~~~~i~~fl~ 272 (273)
. ...++.+.+++|+.
T Consensus 236 ~-~~~~yi~~l~~f~~ 250 (258)
T KOG1552|consen 236 E-LYPEYIEHLRRFIS 250 (258)
T ss_pred c-cCHHHHHHHHHHHH
Confidence 5 44467788888864
No 75
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.67 E-value=4.4e-15 Score=121.71 Aligned_cols=220 Identities=19% Similarity=0.236 Sum_probs=131.5
Q ss_pred ceEEEecCCCCChhchhhhhhhhhcC-ceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCCC-ceEE
Q 024033 22 ETLVLAHGFGGDQSIWDKITPVLSQH-YRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDLK-STLF 99 (273)
Q Consensus 22 ~~vvllHG~~~~~~~w~~~~~~L~~~-~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~~-~~~l 99 (273)
++|+|+|+.+++...|.++.+.|.+. +.|++++.+|.+.... ...|++++|+...+.+.....+ ++.|
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~~----------~~~si~~la~~y~~~I~~~~~~gp~~L 70 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDEP----------PPDSIEELASRYAEAIRARQPEGPYVL 70 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTSH----------EESSHHHHHHHHHHHHHHHTSSSSEEE
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCCC----------CCCCHHHHHHHHHHHhhhhCCCCCeee
Confidence 37999999999999999999999997 9999999999983311 1346999999998888776555 8999
Q ss_pred EEEChhHHHHHHHHhh---CcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHHhccccccccCCCChh
Q 024033 100 IGHSMSGMIGCIASVK---KPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASWASSFPRLVVDTKDAP 176 (273)
Q Consensus 100 vGhS~GG~ia~~~a~~---~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (273)
+|||+||.||..+|.+ .-..+..|+++|+.+........ ............+.. .... .... ...+.
T Consensus 71 ~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~~---~~~~~~~~~~~~~~~----~~~~-~~~~--~~~~~ 140 (229)
T PF00975_consen 71 AGWSFGGILAFEMARQLEEAGEEVSRLILIDSPPPSIKERPR---SREPSDEQFIEELRR----IGGT-PDAS--LEDEE 140 (229)
T ss_dssp EEETHHHHHHHHHHHHHHHTT-SESEEEEESCSSTTCHSCHH---HHHCHHHHHHHHHHH----HCHH-HHHH--CHHHH
T ss_pred hccCccHHHHHHHHHHHHHhhhccCceEEecCCCCCcccchh---hhhhhHHHHHHHHHH----hcCC-chhh--hcCHH
Confidence 9999999999999964 34458899999976432111000 000000001111110 0000 0000 00000
Q ss_pred hHHHHHHHHHhcChhhHHHHHHHhcccccccccCCCCCCEEEEecCCCCccchh---HHHHHHHHcCCCeEEEEcCCCCC
Q 024033 177 SVEKFENCLKRMRHEFALPLAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNS---VAYYMQEKMKGKSTVEIIEADGH 253 (273)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~---~~~~~~~~~~~~~~~~~i~~~gH 253 (273)
....+.+.+.. . .......... ....-.+|..+....+|+..... ....+.+..++..+++.++ ++|
T Consensus 141 ~~~~~~~~~~~----~----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~v~-G~H 210 (229)
T PF00975_consen 141 LLARLLRALRD----D----FQALENYSIR-PIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTSGDVEVHDVP-GDH 210 (229)
T ss_dssp HHHHHHHHHHH----H----HHHHHTCS-T-TSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBSSSEEEEEES-SET
T ss_pred HHHHHHHHHHH----H----HHHHhhccCC-ccccCCCcEEEEecCCCccccchhhhhHHHHHHhcCCCcEEEEEc-CCC
Confidence 11111111110 0 0000000000 01111567888888888876554 2333566566555777777 689
Q ss_pred CCCcc-ChHHHHHHHHHhh
Q 024033 254 FPQLT-AHLQLIDVLNKVL 271 (273)
Q Consensus 254 ~~~~e-~p~~~~~~i~~fl 271 (273)
+-+++ +..++++.|.++|
T Consensus 211 ~~~l~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 211 FSMLKPHVAEIAEKIAEWL 229 (229)
T ss_dssp TGHHSTTHHHHHHHHHHHH
T ss_pred cEecchHHHHHHHHHhccC
Confidence 99997 8889999998875
No 76
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.66 E-value=1.2e-14 Score=120.77 Aligned_cols=238 Identities=17% Similarity=0.213 Sum_probs=127.5
Q ss_pred CceEEEecCCCCC-hhch-hhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHH----cC
Q 024033 21 KETLVLAHGFGGD-QSIW-DKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEE----ND 93 (273)
Q Consensus 21 ~~~vvllHG~~~~-~~~w-~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~----~~ 93 (273)
.|.||++||+.++ .+.| +-+...+.+ +|.|+++++||++.+....+ .-|. ....+|+..+++. ..
T Consensus 75 ~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p------~~yh--~G~t~D~~~~l~~l~~~~~ 146 (345)
T COG0429 75 KPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSP------RLYH--SGETEDIRFFLDWLKARFP 146 (345)
T ss_pred CceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCc------ceec--ccchhHHHHHHHHHHHhCC
Confidence 4789999999654 3556 567777877 89999999999999843221 1122 1122444444443 34
Q ss_pred CCceEEEEEChhH-HHHHHHHhhCcc-cccceEEeecCCCccC-CCCCCCCCChhhHHH-HHHHHHHhHHHHhccccccc
Q 024033 94 LKSTLFIGHSMSG-MIGCIASVKKPE-LFKRLILIGTSPRYIN-TDDYEGGFEPSDIEN-LISNVETNYASWASSFPRLV 169 (273)
Q Consensus 94 ~~~~~lvGhS~GG-~ia~~~a~~~p~-~v~~lvl~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 169 (273)
-.++..+|.|||| +++..++..--+ ++.+.+.++.+-.... ......++...-..+ +...++.....-.+.+.
T Consensus 147 ~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~~~L~~~~~~kl~~l~--- 223 (345)
T COG0429 147 PRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYLLRNLKRNAARKLKELE--- 223 (345)
T ss_pred CCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHHHHHHhcC---
Confidence 5679999999999 888888864332 4455665554221100 000111121100011 11111111111111110
Q ss_pred cCCCChhhHHHHHH---HHHhcChhhH------HHHHHHhcccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcC
Q 024033 170 VDTKDAPSVEKFEN---CLKRMRHEFA------LPLAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMK 240 (273)
Q Consensus 170 ~~~~~~~~~~~~~~---~~~~~~~~~~------~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~ 240 (273)
...+....+..+ .+..++.... ........+......+.+|.+|++||++.+|++++++...+.....+
T Consensus 224 --~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~n 301 (345)
T COG0429 224 --PSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLN 301 (345)
T ss_pred --cccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccccccceEEEecCCCCCCChhhCCcchhcCC
Confidence 001111111111 1111111100 00011111233456789999999999999999999987766655344
Q ss_pred CCeEEEEcCCCCCCCCcc----ChH-HHHHHHHHhh
Q 024033 241 GKSTVEIIEADGHFPQLT----AHL-QLIDVLNKVL 271 (273)
Q Consensus 241 ~~~~~~~i~~~gH~~~~e----~p~-~~~~~i~~fl 271 (273)
..+.+...+-+||.-.+. +|. ...+.|-+|+
T Consensus 302 p~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l 337 (345)
T COG0429 302 PNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWL 337 (345)
T ss_pred CceEEEeecCCceEEeccCccccchhhHHHHHHHHH
Confidence 356788888899998887 442 4445555554
No 77
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.66 E-value=5.4e-16 Score=130.36 Aligned_cols=111 Identities=17% Similarity=0.299 Sum_probs=80.5
Q ss_pred cceEEecCCCceEEEecCCCCCh-hchhh-hhh-hhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHH
Q 024033 12 MNAKIIGSGKETLVLAHGFGGDQ-SIWDK-ITP-VLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLIT 87 (273)
Q Consensus 12 ~~~~~~G~~~~~vvllHG~~~~~-~~w~~-~~~-~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~ 87 (273)
+....+++.+|++|+||||+++. ..|.. +.. .|.. +|+|+++|++|++.+..+. ..+ +.+..++++.+
T Consensus 27 ~~~~~f~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~-------a~~-~~~~v~~~la~ 98 (275)
T cd00707 27 LKNSNFNPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQ-------AVN-NTRVVGAELAK 98 (275)
T ss_pred hhhcCCCCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHH-------HHH-hHHHHHHHHHH
Confidence 33444456678999999999987 78855 444 3443 7999999999984331111 111 25555555555
Q ss_pred HHHHc------CCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCC
Q 024033 88 LLEEN------DLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSP 130 (273)
Q Consensus 88 ~~~~~------~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (273)
+++.+ +.++++||||||||.+|..++.++|++|+++++++++.
T Consensus 99 ~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~ 147 (275)
T cd00707 99 FLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAG 147 (275)
T ss_pred HHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCc
Confidence 55543 45789999999999999999999999999999999753
No 78
>PLN00021 chlorophyllase
Probab=99.65 E-value=3.1e-15 Score=127.60 Aligned_cols=101 Identities=19% Similarity=0.184 Sum_probs=73.7
Q ss_pred CceEEEecCCCCChhchhhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHH-------c
Q 024033 21 KETLVLAHGFGGDQSIWDKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEE-------N 92 (273)
Q Consensus 21 ~~~vvllHG~~~~~~~w~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~-------~ 92 (273)
.|+|||+||++.+...|..+...|++ +|.|+++|++|++.+... ..+.+..+..+.+.+.++. .
T Consensus 52 ~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~~--------~~i~d~~~~~~~l~~~l~~~l~~~~~~ 123 (313)
T PLN00021 52 YPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDGT--------DEIKDAAAVINWLSSGLAAVLPEGVRP 123 (313)
T ss_pred CCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCch--------hhHHHHHHHHHHHHhhhhhhccccccc
Confidence 47899999999999999999999988 699999999997543111 0111233333333332222 3
Q ss_pred CCCceEEEEEChhHHHHHHHHhhCcc-----cccceEEeecC
Q 024033 93 DLKSTLFIGHSMSGMIGCIASVKKPE-----LFKRLILIGTS 129 (273)
Q Consensus 93 ~~~~~~lvGhS~GG~ia~~~a~~~p~-----~v~~lvl~~~~ 129 (273)
+.++++++||||||.+++.+|..+|+ ++++++++++.
T Consensus 124 d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv 165 (313)
T PLN00021 124 DLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPV 165 (313)
T ss_pred ChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccc
Confidence 45789999999999999999999885 57888877653
No 79
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.62 E-value=2.3e-15 Score=122.16 Aligned_cols=197 Identities=17% Similarity=0.245 Sum_probs=110.3
Q ss_pred chhhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHc--CCCceEEEEEChhHHHHHHH
Q 024033 36 IWDKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEEN--DLKSTLFIGHSMSGMIGCIA 112 (273)
Q Consensus 36 ~w~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~--~~~~~~lvGhS~GG~ia~~~ 112 (273)
.|+.....|.+ +|.|+.+|.||.+..................+++..+.+..++++. +.+++.++|||+||.+++.+
T Consensus 2 ~f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~ 81 (213)
T PF00326_consen 2 SFNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLA 81 (213)
T ss_dssp --SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHH
T ss_pred eeeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchh
Confidence 35567778855 9999999999988431110000000111122555555555555553 34679999999999999999
Q ss_pred HhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHHhccccccccCCCChhhHHHHHHHHHhcChhh
Q 024033 113 SVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASWASSFPRLVVDTKDAPSVEKFENCLKRMRHEF 192 (273)
Q Consensus 113 a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (273)
+.++|+++++++..++....... ....+. .. ...+..+ +.. ....+.+ +.....
T Consensus 82 ~~~~~~~f~a~v~~~g~~d~~~~------~~~~~~---~~--~~~~~~~---------~~~-~~~~~~~-~~~s~~---- 135 (213)
T PF00326_consen 82 ATQHPDRFKAAVAGAGVSDLFSY------YGTTDI---YT--KAEYLEY---------GDP-WDNPEFY-RELSPI---- 135 (213)
T ss_dssp HHHTCCGSSEEEEESE-SSTTCS------BHHTCC---HH--HGHHHHH---------SST-TTSHHHH-HHHHHG----
T ss_pred hcccceeeeeeeccceecchhcc------cccccc---cc--ccccccc---------Ccc-chhhhhh-hhhccc----
Confidence 99999999999988764322111 000000 00 0000010 000 0011111 111111
Q ss_pred HHHHHHHhcccccccccCC--CCCCEEEEecCCCCccchhHHHHHHHHcCC---CeEEEEcCCCCCCCC-ccChHHHHHH
Q 024033 193 ALPLAKTVFYSDEREILDK--VETPCTIFQPSNDAVVPNSVAYYMQEKMKG---KSTVEIIEADGHFPQ-LTAHLQLIDV 266 (273)
Q Consensus 193 ~~~~~~~~~~~~~~~~l~~--i~~P~lii~G~~D~~~~~~~~~~~~~~~~~---~~~~~~i~~~gH~~~-~e~p~~~~~~ 266 (273)
..+.+ +++|+++++|++|..+|+..+..+.+.+.. ..++.++|++||... .+......+.
T Consensus 136 --------------~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~ 201 (213)
T PF00326_consen 136 --------------SPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYER 201 (213)
T ss_dssp --------------GGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHH
T ss_pred --------------cccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHH
Confidence 11222 789999999999999999888877665532 278999999999444 4444555666
Q ss_pred HHHhhc
Q 024033 267 LNKVLG 272 (273)
Q Consensus 267 i~~fl~ 272 (273)
+.+|++
T Consensus 202 ~~~f~~ 207 (213)
T PF00326_consen 202 ILDFFD 207 (213)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666653
No 80
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.62 E-value=2.9e-14 Score=115.68 Aligned_cols=109 Identities=12% Similarity=0.110 Sum_probs=72.5
Q ss_pred CCceEEEecCCCCChhchh---hhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcc---c-ccHHHHHHHHHHHHHH
Q 024033 20 GKETLVLAHGFGGDQSIWD---KITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVK---Y-SSYEAFADDLITLLEE 91 (273)
Q Consensus 20 ~~~~vvllHG~~~~~~~w~---~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~---~-~s~~~~a~~l~~~~~~ 91 (273)
..|.||++||.+++...|. .+...+.+ +|.|++||.+|+|.+.... . ++.+.. . ....++.+-+..+.+.
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~i~~~~~~ 89 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCW-D-WFFTHHRARGTGEVESLHQLIDAVKAN 89 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCC-C-CCCccccCCCCccHHHHHHHHHHHHHh
Confidence 3578999999999887775 34444444 7999999999998653210 0 111100 0 0022222222222333
Q ss_pred cCC--CceEEEEEChhHHHHHHHHhhCcccccceEEeecCC
Q 024033 92 NDL--KSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSP 130 (273)
Q Consensus 92 ~~~--~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (273)
.++ ++++|+|||+||.+++.++.++|+++++++.+++.+
T Consensus 90 ~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 90 YSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred cCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 333 579999999999999999999999999999888654
No 81
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.61 E-value=8e-14 Score=124.99 Aligned_cols=242 Identities=12% Similarity=0.132 Sum_probs=139.0
Q ss_pred ccccccccccceEEec--CCCceEEEecCCCCChhch-----hhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcc
Q 024033 3 IREQGLSAAMNAKIIG--SGKETLVLAHGFGGDQSIW-----DKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVK 74 (273)
Q Consensus 3 ~~~~~~~~~~~~~~~G--~~~~~vvllHG~~~~~~~w-----~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~ 74 (273)
+=+.++...++|.-.. ..++|||+++.+-...-+| +.++.+|.+ +|+|+.+|++.-+.+++
T Consensus 195 V~~n~l~eLiqY~P~te~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r----------- 263 (560)
T TIGR01839 195 VFRNEVLELIQYKPITEQQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHR----------- 263 (560)
T ss_pred eEECCceEEEEeCCCCCCcCCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhc-----------
Confidence 3344555667775322 2356899999998777777 467888766 89999999988665521
Q ss_pred cccHHHHHHHHHHHHHHc----CCCceEEEEEChhHHHHHH----HHhhCcc-cccceEEeecCCCccCCCCCCCCCChh
Q 024033 75 YSSYEAFADDLITLLEEN----DLKSTLFIGHSMSGMIGCI----ASVKKPE-LFKRLILIGTSPRYINTDDYEGGFEPS 145 (273)
Q Consensus 75 ~~s~~~~a~~l~~~~~~~----~~~~~~lvGhS~GG~ia~~----~a~~~p~-~v~~lvl~~~~~~~~~~~~~~~~~~~~ 145 (273)
..++++|++.+.+.++.. |-++++++||||||.+++. +++++++ +|++++++.+.-.+.............
T Consensus 264 ~~~ldDYv~~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~ 343 (560)
T TIGR01839 264 EWGLSTYVDALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQ 343 (560)
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChH
Confidence 224888887777777654 6788999999999999886 7888886 899999998754431110010011111
Q ss_pred hH---HHHHH--------HHHHhHH-------HHhccccccccCCCChh-hHHHHHHHHHhcChhhHHHHHHHhccc---
Q 024033 146 DI---ENLIS--------NVETNYA-------SWASSFPRLVVDTKDAP-SVEKFENCLKRMRHEFALPLAKTVFYS--- 203 (273)
Q Consensus 146 ~~---~~~~~--------~~~~~~~-------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 203 (273)
.+ ++... .+...|. -|.........+...+. ....+....-.+.......+.. ++..
T Consensus 344 ~~~~~e~~~~~~G~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg~~~~e~l~-ly~~N~L 422 (560)
T TIGR01839 344 TLEAAKRRSYQAGVLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLPAAFHGDLLD-MFKSNPL 422 (560)
T ss_pred HHHHHHHHHHhcCCcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccchHHHHHHHHH-HHhcCCC
Confidence 11 10000 0000000 01000001111111000 0000000000111111111221 2111
Q ss_pred ---------ccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCCCeEEEEcCCCCCCCCc
Q 024033 204 ---------DEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKGKSTVEIIEADGHFPQL 257 (273)
Q Consensus 204 ---------~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~ 257 (273)
...-.+++|+||++++.|++|.++|++.+..+.+.+.+.++++.. .+||.-=+
T Consensus 423 ~~pG~l~v~G~~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs~~~fvl~-~gGHIggi 484 (560)
T TIGR01839 423 TRPDALEVCGTPIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGGKRRFVLS-NSGHIQSI 484 (560)
T ss_pred CCCCCEEECCEEechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCCCeEEEec-CCCccccc
Confidence 122347899999999999999999999999999988765566555 48997543
No 82
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.60 E-value=1.8e-14 Score=120.50 Aligned_cols=98 Identities=21% Similarity=0.226 Sum_probs=85.8
Q ss_pred ceEEEecCCCCChhchhhhhhhhhcC----------ceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHH
Q 024033 22 ETLVLAHGFGGDQSIWDKITPVLSQH----------YRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEE 91 (273)
Q Consensus 22 ~~vvllHG~~~~~~~w~~~~~~L~~~----------~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~ 91 (273)
.|||++|||+++-..|.+.+|.|.+. |.||||-+||||.|+.+. ...+. ..+.|.-+..+|-.
T Consensus 153 ~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~s------k~GFn-~~a~ArvmrkLMlR 225 (469)
T KOG2565|consen 153 KPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPS------KTGFN-AAATARVMRKLMLR 225 (469)
T ss_pred cceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCc------cCCcc-HHHHHHHHHHHHHH
Confidence 47999999999999999999998653 789999999999997764 12243 77788889999999
Q ss_pred cCCCceEEEEEChhHHHHHHHHhhCcccccceEEe
Q 024033 92 NDLKSTLFIGHSMSGMIGCIASVKKPELFKRLILI 126 (273)
Q Consensus 92 ~~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~ 126 (273)
+|.+++.+=|-.||+.|+..+|..+|+.|.++-+-
T Consensus 226 Lg~nkffiqGgDwGSiI~snlasLyPenV~GlHln 260 (469)
T KOG2565|consen 226 LGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLN 260 (469)
T ss_pred hCcceeEeecCchHHHHHHHHHhhcchhhhHhhhc
Confidence 99999999999999999999999999999887653
No 83
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.54 E-value=2.6e-13 Score=136.90 Aligned_cols=100 Identities=16% Similarity=0.172 Sum_probs=86.6
Q ss_pred CceEEEecCCCCChhchhhhhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCC-CceEE
Q 024033 21 KETLVLAHGFGGDQSIWDKITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDL-KSTLF 99 (273)
Q Consensus 21 ~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~-~~~~l 99 (273)
+++|+|+||+++++..|..+.+.|.++++|+++|++|+|.+. +. .+ +++++++++.+.++.+.. .++++
T Consensus 1068 ~~~l~~lh~~~g~~~~~~~l~~~l~~~~~v~~~~~~g~~~~~-~~--------~~-~l~~la~~~~~~i~~~~~~~p~~l 1137 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFSVLSRYLDPQWSIYGIQSPRPDGPM-QT--------AT-SLDEVCEAHLATLLEQQPHGPYHL 1137 (1296)
T ss_pred CCCeEEecCCCCchHHHHHHHHhcCCCCcEEEEECCCCCCCC-CC--------CC-CHHHHHHHHHHHHHhhCCCCCEEE
Confidence 368999999999999999999999999999999999998652 21 23 499999999999987654 47999
Q ss_pred EEEChhHHHHHHHHhh---CcccccceEEeecCC
Q 024033 100 IGHSMSGMIGCIASVK---KPELFKRLILIGTSP 130 (273)
Q Consensus 100 vGhS~GG~ia~~~a~~---~p~~v~~lvl~~~~~ 130 (273)
+||||||++|..+|.+ +|+++..++++++.+
T Consensus 1138 ~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1138 LGYSLGGTLAQGIAARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred EEechhhHHHHHHHHHHHHcCCceeEEEEecCCC
Confidence 9999999999999985 688999999998743
No 84
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.53 E-value=5.9e-13 Score=113.87 Aligned_cols=204 Identities=19% Similarity=0.195 Sum_probs=115.1
Q ss_pred ceEEEecCCCCChhchhhhhhhhhcCceEEEEecCCCcc-ccCCCC------C-----CCCC-CcccccHHHHHHHHHHH
Q 024033 22 ETLVLAHGFGGDQSIWDKITPVLSQHYRVLAFDWLFSGA-ILNKDH------Q-----SLYN-PVKYSSYEAFADDLITL 88 (273)
Q Consensus 22 ~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~-S~~~~~------~-----~~~~-~~~~~s~~~~a~~l~~~ 88 (273)
|.||..||.+++...|......-..+|-|+++|.+|+|. |..+.. . +..+ +..+. +..+..|....
T Consensus 84 Pavv~~hGyg~~~~~~~~~~~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~y-yr~~~~D~~ra 162 (320)
T PF05448_consen 84 PAVVQFHGYGGRSGDPFDLLPWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYY-YRRVYLDAVRA 162 (320)
T ss_dssp EEEEEE--TT--GGGHHHHHHHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-H-HHHHHHHHHHH
T ss_pred CEEEEecCCCCCCCCcccccccccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHH-HHHHHHHHHHH
Confidence 578999999999888988777777799999999999993 311110 0 0001 22232 44555555544
Q ss_pred HH---Hc---CCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHH--HhHHH
Q 024033 89 LE---EN---DLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVE--TNYAS 160 (273)
Q Consensus 89 ~~---~~---~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 160 (273)
++ .+ +.+++.+.|.|.||.+++.+|+..| +|++++..-+.. .+ ..+.+..-. ..+.
T Consensus 163 vd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l---~d-----------~~~~~~~~~~~~~y~- 226 (320)
T PF05448_consen 163 VDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFL---CD-----------FRRALELRADEGPYP- 226 (320)
T ss_dssp HHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESS---SS-----------HHHHHHHT--STTTH-
T ss_pred HHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCc---cc-----------hhhhhhcCCccccHH-
Confidence 43 33 3457999999999999999999887 588888765421 11 111111000 0011
Q ss_pred HhccccccccCCCChhhHHHHHHHHHhcChhhHHHHHHHhcccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcC
Q 024033 161 WASSFPRLVVDTKDAPSVEKFENCLKRMRHEFALPLAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMK 240 (273)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~ 240 (273)
.+..+.+.. ...++...+....+..-|.....++|+||+++-.|-.|.++||..+-.....++
T Consensus 227 ----------------~~~~~~~~~-d~~~~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~ 289 (320)
T PF05448_consen 227 ----------------EIRRYFRWR-DPHHEREPEVFETLSYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIP 289 (320)
T ss_dssp ----------------HHHHHHHHH-SCTHCHHHHHHHHHHTT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--
T ss_pred ----------------HHHHHHhcc-CCCcccHHHHHHHHhhhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccC
Confidence 111111110 111122223333344456667788999999999999999999999888888888
Q ss_pred CCeEEEEcCCCCCCCCccC
Q 024033 241 GKSTVEIIEADGHFPQLTA 259 (273)
Q Consensus 241 ~~~~~~~i~~~gH~~~~e~ 259 (273)
+.+++.+++..||...-+.
T Consensus 290 ~~K~l~vyp~~~He~~~~~ 308 (320)
T PF05448_consen 290 GPKELVVYPEYGHEYGPEF 308 (320)
T ss_dssp SSEEEEEETT--SSTTHHH
T ss_pred CCeeEEeccCcCCCchhhH
Confidence 7789999999999776544
No 85
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.52 E-value=7.2e-13 Score=107.77 Aligned_cols=183 Identities=20% Similarity=0.253 Sum_probs=103.8
Q ss_pred CCCceEEEecCCCCChhchhhhhh-hhh-cCceEEEEecCC------CccccCCCCC-CCCCCc---ccccHHHHHHHHH
Q 024033 19 SGKETLVLAHGFGGDQSIWDKITP-VLS-QHYRVLAFDWLF------SGAILNKDHQ-SLYNPV---KYSSYEAFADDLI 86 (273)
Q Consensus 19 ~~~~~vvllHG~~~~~~~w~~~~~-~L~-~~~~via~D~~G------~G~S~~~~~~-~~~~~~---~~~s~~~~a~~l~ 86 (273)
+..+.|||+||+|++...|..... .+. .+.+++.+.-|- .|..-.-+.+ ...++. ....++..++.+.
T Consensus 12 ~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l~ 91 (216)
T PF02230_consen 12 KAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERLD 91 (216)
T ss_dssp T-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHHH
T ss_pred CCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHHH
Confidence 456789999999999988876655 222 367777775532 2220000000 000000 1122555555566
Q ss_pred HHHHHc-----CCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHH
Q 024033 87 TLLEEN-----DLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASW 161 (273)
Q Consensus 87 ~~~~~~-----~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (273)
++++.. +.++++|.|.|.||++++.++.++|+++.++|.+++.... .
T Consensus 92 ~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~--~-------------------------- 143 (216)
T PF02230_consen 92 ELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPP--E-------------------------- 143 (216)
T ss_dssp HHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TT--G--------------------------
T ss_pred HHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccc--c--------------------------
Confidence 666542 3357999999999999999999999999999998752110 0
Q ss_pred hccccccccCCCChhhHHHHHHHHHhcChhhHHHHHHHhcccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCC
Q 024033 162 ASSFPRLVVDTKDAPSVEKFENCLKRMRHEFALPLAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKG 241 (273)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~ 241 (273)
... .. .. .... ++|+++++|++|+++|.+..+...+.+..
T Consensus 144 ----------~~~-----------~~-~~----------------~~~~--~~pi~~~hG~~D~vvp~~~~~~~~~~L~~ 183 (216)
T PF02230_consen 144 ----------SEL-----------ED-RP----------------EALA--KTPILIIHGDEDPVVPFEWAEKTAEFLKA 183 (216)
T ss_dssp ----------CCC-----------HC-CH----------------CCCC--TS-EEEEEETT-SSSTHHHHHHHHHHHHC
T ss_pred ----------ccc-----------cc-cc----------------cccC--CCcEEEEecCCCCcccHHHHHHHHHHHHh
Confidence 000 00 00 0011 68999999999999999887777776642
Q ss_pred ---CeEEEEcCCCCCCCCccChHHHHHHHHH
Q 024033 242 ---KSTVEIIEADGHFPQLTAHLQLIDVLNK 269 (273)
Q Consensus 242 ---~~~~~~i~~~gH~~~~e~p~~~~~~i~~ 269 (273)
..++..+++.||-+..+.-..+.+.|++
T Consensus 184 ~~~~v~~~~~~g~gH~i~~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 184 AGANVEFHEYPGGGHEISPEELRDLREFLEK 214 (216)
T ss_dssp TT-GEEEEEETT-SSS--HHHHHHHHHHHHH
T ss_pred cCCCEEEEEcCCCCCCCCHHHHHHHHHHHhh
Confidence 2688999999998875444444444433
No 86
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.50 E-value=1.3e-13 Score=107.59 Aligned_cols=198 Identities=14% Similarity=0.164 Sum_probs=127.8
Q ss_pred CCCceEEEecCCCCChhchhhhhhhhhc--CceEEEEecCCCccccC-CCCCCCCCCcccccHHHHHHHHHHHH-HHc--
Q 024033 19 SGKETLVLAHGFGGDQSIWDKITPVLSQ--HYRVLAFDWLFSGAILN-KDHQSLYNPVKYSSYEAFADDLITLL-EEN-- 92 (273)
Q Consensus 19 ~~~~~vvllHG~~~~~~~w~~~~~~L~~--~~~via~D~~G~G~S~~-~~~~~~~~~~~~~s~~~~a~~l~~~~-~~~-- 92 (273)
++.|+++.+||.-+|-...-+.+.-+-. +-+|..+++||||.|.. |..+ . +.--++.+++.+ ++-
T Consensus 76 ~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~--------G-L~lDs~avldyl~t~~~~ 146 (300)
T KOG4391|consen 76 SSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSEE--------G-LKLDSEAVLDYLMTRPDL 146 (300)
T ss_pred CCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCcccc--------c-eeccHHHHHHHHhcCccC
Confidence 4678999999999988877776665533 67899999999999943 2211 1 222244444433 332
Q ss_pred CCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHHhccccccccCC
Q 024033 93 DLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASWASSFPRLVVDT 172 (273)
Q Consensus 93 ~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (273)
+..+++|.|-|+||.+|..+|++..+++.++|+-++-.-. + .+.. ..+.+.
T Consensus 147 dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SI-p--------------~~~i----------~~v~p~---- 197 (300)
T KOG4391|consen 147 DKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSI-P--------------HMAI----------PLVFPF---- 197 (300)
T ss_pred CcceEEEEecccCCeeEEEeeccchhheeeeeeechhccc-h--------------hhhh----------heeccc----
Confidence 4457999999999999999999999999999986542110 0 0000 000000
Q ss_pred CChhhHHHHHHHHHhcChhhHHHHHHHhcccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCCC-eEEEEcCCC
Q 024033 173 KDAPSVEKFENCLKRMRHEFALPLAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKGK-STVEIIEAD 251 (273)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~-~~~~~i~~~ 251 (273)
...+.-.+.. +..+. -...+.+-++|.|++.|..|.++||.+.+.+.+.-|+. +++..+|++
T Consensus 198 -----~~k~i~~lc~----------kn~~~--S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~g 260 (300)
T KOG4391|consen 198 -----PMKYIPLLCY----------KNKWL--SYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDG 260 (300)
T ss_pred -----hhhHHHHHHH----------Hhhhc--chhhhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCC
Confidence 0000000000 00000 00112345789999999999999999999988887753 689999999
Q ss_pred CCCCCccChHHHHHHHHHhhc
Q 024033 252 GHFPQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 252 gH~~~~e~p~~~~~~i~~fl~ 272 (273)
.|.=.+-. +...++|++||+
T Consensus 261 tHNDT~i~-dGYfq~i~dFla 280 (300)
T KOG4391|consen 261 THNDTWIC-DGYFQAIEDFLA 280 (300)
T ss_pred ccCceEEe-ccHHHHHHHHHH
Confidence 99766643 456778888874
No 87
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.50 E-value=8.8e-14 Score=129.61 Aligned_cols=97 Identities=20% Similarity=0.226 Sum_probs=75.6
Q ss_pred CceEEEecCCCCChhchhhhhhhhhc-CceEEEEecCCCccccCC-CCCC----CCCCccc----------ccHHHHHHH
Q 024033 21 KETLVLAHGFGGDQSIWDKITPVLSQ-HYRVLAFDWLFSGAILNK-DHQS----LYNPVKY----------SSYEAFADD 84 (273)
Q Consensus 21 ~~~vvllHG~~~~~~~w~~~~~~L~~-~~~via~D~~G~G~S~~~-~~~~----~~~~~~~----------~s~~~~a~~ 84 (273)
.|+|||+||++++...|..+.+.|.+ +|+|+++|+||||.|+.. .... ......| +++..++.|
T Consensus 449 ~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~D 528 (792)
T TIGR03502 449 WPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILD 528 (792)
T ss_pred CcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHH
Confidence 35899999999999999999999985 899999999999998322 0000 0011112 258999999
Q ss_pred HHHHHHHcC----------------CCceEEEEEChhHHHHHHHHhhCc
Q 024033 85 LITLLEEND----------------LKSTLFIGHSMSGMIGCIASVKKP 117 (273)
Q Consensus 85 l~~~~~~~~----------------~~~~~lvGhS~GG~ia~~~a~~~p 117 (273)
+..+...+. ..+++++||||||+++..++....
T Consensus 529 ll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~an 577 (792)
T TIGR03502 529 LLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYAN 577 (792)
T ss_pred HHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhcC
Confidence 999888776 347999999999999999987533
No 88
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.50 E-value=4.6e-13 Score=104.36 Aligned_cols=155 Identities=19% Similarity=0.338 Sum_probs=102.4
Q ss_pred EEEecCCCCC-hhchhhh-hhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCCCceEEEE
Q 024033 24 LVLAHGFGGD-QSIWDKI-TPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDLKSTLFIG 101 (273)
Q Consensus 24 vvllHG~~~~-~~~w~~~-~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~~~~~lvG 101 (273)
|++|||++++ ...|.+. ...|.+.++|-.+|+ +.| +.+++.+.+.+.+...+ ++++|||
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~~~V~~~~~------~~P------------~~~~W~~~l~~~i~~~~-~~~ilVa 61 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENSVRVEQPDW------DNP------------DLDEWVQALDQAIDAID-EPTILVA 61 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTSEEEEEC--------TS--------------HHHHHHHHHHCCHC-T-TTEEEEE
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCCeEEecccc------CCC------------CHHHHHHHHHHHHhhcC-CCeEEEE
Confidence 6899999776 5889764 455666778877765 233 28888888888887653 4699999
Q ss_pred EChhHHHHHHHH-hhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHHhccccccccCCCChhhHHH
Q 024033 102 HSMSGMIGCIAS-VKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASWASSFPRLVVDTKDAPSVEK 180 (273)
Q Consensus 102 hS~GG~ia~~~a-~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (273)
||+|+..++.++ ...+.+|++++|+++.... . . . . +.+.....
T Consensus 62 HSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~--~-----------~--------~---~----~~~~~~~f-------- 105 (171)
T PF06821_consen 62 HSLGCLTALRWLAEQSQKKVAGALLVAPFDPD--D-----------P--------E---P----FPPELDGF-------- 105 (171)
T ss_dssp ETHHHHHHHHHHHHTCCSSEEEEEEES--SCG--C-----------H--------H---C----CTCGGCCC--------
T ss_pred eCHHHHHHHHHHhhcccccccEEEEEcCCCcc--c-----------c--------c---c----hhhhcccc--------
Confidence 999999999999 8888999999999763210 0 0 0 0 00000000
Q ss_pred HHHHHHhcChhhHHHHHHHhcccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCCCeEEEEcCCCCCCCCccC
Q 024033 181 FENCLKRMRHEFALPLAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKGKSTVEIIEADGHFPQLTA 259 (273)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~ 259 (273)
.+ .....+.+|.++|.+++|+.+|.+.++++++.+. ++++.++++||+--.+-
T Consensus 106 --------~~----------------~p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l~--a~~~~~~~~GHf~~~~G 158 (171)
T PF06821_consen 106 --------TP----------------LPRDPLPFPSIVIASDNDPYVPFERAQRLAQRLG--AELIILGGGGHFNAASG 158 (171)
T ss_dssp --------TT----------------SHCCHHHCCEEEEEETTBSSS-HHHHHHHHHHHT---EEEEETS-TTSSGGGT
T ss_pred --------cc----------------CcccccCCCeEEEEcCCCCccCHHHHHHHHHHcC--CCeEECCCCCCcccccC
Confidence 00 0011224677999999999999999999999996 48999999999986543
No 89
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.48 E-value=7.2e-13 Score=123.51 Aligned_cols=208 Identities=18% Similarity=0.154 Sum_probs=121.3
Q ss_pred ceEEEecCCCCChhc--hhhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCC---C
Q 024033 22 ETLVLAHGFGGDQSI--WDKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDL---K 95 (273)
Q Consensus 22 ~~vvllHG~~~~~~~--w~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~---~ 95 (273)
|.||++||-+..... |....+.|.. +|.|+.++.||.+.-...-.+..........++++.+.+. ++++.+. +
T Consensus 395 P~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ 473 (620)
T COG1506 395 PLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPE 473 (620)
T ss_pred CEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHH-HHHhCCCcChH
Confidence 689999998654433 4555556655 9999999999765410000000000011123777777777 6666543 4
Q ss_pred ceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHHhccccccccCCCCh
Q 024033 96 STLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASWASSFPRLVVDTKDA 175 (273)
Q Consensus 96 ~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (273)
++.+.|||.||..++.++.+.| ++++.+...+....... .. ... ..+.........++.
T Consensus 474 ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~---------------~~--~~~-~~~~~~~~~~~~~~~-- 532 (620)
T COG1506 474 RIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLY---------------FG--EST-EGLRFDPEENGGGPP-- 532 (620)
T ss_pred HeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhh---------------cc--ccc-hhhcCCHHHhCCCcc--
Confidence 7999999999999999999998 67777665432110000 00 000 000000000000000
Q ss_pred hhHHHHHHHHHhcChhhHHHHHHHhcccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCC---CeEEEEcCCCC
Q 024033 176 PSVEKFENCLKRMRHEFALPLAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKG---KSTVEIIEADG 252 (273)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~---~~~~~~i~~~g 252 (273)
...+ .+.... ......+|++|+|+|||++|.-+|.+.+..+.+.+.. .++++++|+.|
T Consensus 533 ~~~~----~~~~~s---------------p~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~ 593 (620)
T COG1506 533 EDRE----KYEDRS---------------PIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEG 593 (620)
T ss_pred cChH----HHHhcC---------------hhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCC
Confidence 0000 111111 1124678899999999999999999888877666542 26899999999
Q ss_pred CCCCccChHHHHHHHHHhhc
Q 024033 253 HFPQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 253 H~~~~e~p~~~~~~i~~fl~ 272 (273)
|.+.- |+...+.++++++
T Consensus 594 H~~~~--~~~~~~~~~~~~~ 611 (620)
T COG1506 594 HGFSR--PENRVKVLKEILD 611 (620)
T ss_pred cCCCC--chhHHHHHHHHHH
Confidence 98877 5545555555444
No 90
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.47 E-value=1.8e-12 Score=119.47 Aligned_cols=102 Identities=17% Similarity=0.066 Sum_probs=73.9
Q ss_pred CCceEEEecCCCCChh---chh-hhhhhh-hcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHc--
Q 024033 20 GKETLVLAHGFGGDQS---IWD-KITPVL-SQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEEN-- 92 (273)
Q Consensus 20 ~~~~vvllHG~~~~~~---~w~-~~~~~L-~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~-- 92 (273)
..|+||++||++.+.. .|. .....| +.+|.|+++|+||+|.|+... . .+ + ...++|+.++++.+
T Consensus 21 ~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~-----~--~~-~-~~~~~D~~~~i~~l~~ 91 (550)
T TIGR00976 21 PVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEF-----D--LL-G-SDEAADGYDLVDWIAK 91 (550)
T ss_pred CCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCce-----E--ec-C-cccchHHHHHHHHHHh
Confidence 3478999999987653 232 233445 458999999999999995321 0 11 1 34455666555543
Q ss_pred ---CCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCC
Q 024033 93 ---DLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSP 130 (273)
Q Consensus 93 ---~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (273)
...++.++|||+||.+++.+|..+|+++++++..++..
T Consensus 92 q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~ 132 (550)
T TIGR00976 92 QPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVW 132 (550)
T ss_pred CCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCccc
Confidence 23589999999999999999999999999999887654
No 91
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.45 E-value=1.3e-11 Score=107.74 Aligned_cols=260 Identities=13% Similarity=0.130 Sum_probs=150.4
Q ss_pred cccccccccceEEecCC----CceEEEecCCCCChhch-hhhhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccH
Q 024033 4 REQGLSAAMNAKIIGSG----KETLVLAHGFGGDQSIW-DKITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSY 78 (273)
Q Consensus 4 ~~~~~~~~~~~~~~G~~----~~~vvllHG~~~~~~~w-~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~ 78 (273)
-++.+...+||+-.... +||||++.-+.++..+. +.++..|-++++|+..|+.--+.. |. ....+. +
T Consensus 81 ~~~~~~~L~~y~~~~~~~~~~~~pvLiV~Pl~g~~~~L~RS~V~~Ll~g~dVYl~DW~~p~~v--p~-----~~~~f~-l 152 (406)
T TIGR01849 81 WDKPFCRLIHFKRQGFRAELPGPAVLIVAPMSGHYATLLRSTVEALLPDHDVYITDWVNARMV--PL-----SAGKFD-L 152 (406)
T ss_pred EECCCeEEEEECCCCcccccCCCcEEEEcCCchHHHHHHHHHHHHHhCCCcEEEEeCCCCCCC--ch-----hcCCCC-H
Confidence 34556666777643221 36899999988766555 667788777999999999765533 11 012234 9
Q ss_pred HHHHHHHHHHHHHcCCCceEEEEEChhHHHHHHHHhhC-----cccccceEEeecCCCccCCCCCCCCCC-hhhHHHHHH
Q 024033 79 EAFADDLITLLEENDLKSTLFIGHSMSGMIGCIASVKK-----PELFKRLILIGTSPRYINTDDYEGGFE-PSDIENLIS 152 (273)
Q Consensus 79 ~~~a~~l~~~~~~~~~~~~~lvGhS~GG~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 152 (273)
++|++-+.+++++.|-+ ++|+|+++||..++.+++.. |++++.+++++++-.+-...+....+. ...++.+..
T Consensus 153 dDYi~~l~~~i~~~G~~-v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~ 231 (406)
T TIGR01849 153 EDYIDYLIEFIRFLGPD-IHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQH 231 (406)
T ss_pred HHHHHHHHHHHHHhCCC-CcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHH
Confidence 99999899999999866 99999999999976655544 778999999987533210000000000 000000000
Q ss_pred H----------------------------HH--HhHHHHhccccccccCCCCh-hhHHHHHHHHH---hcChhhHHHHHH
Q 024033 153 N----------------------------VE--TNYASWASSFPRLVVDTKDA-PSVEKFENCLK---RMRHEFALPLAK 198 (273)
Q Consensus 153 ~----------------------------~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~ 198 (273)
. +. +....+.+.+..+..+.... .....+.+... .+..+...+..+
T Consensus 232 ~~i~~vp~~~~g~gr~v~PG~~~~~~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpge~y~~~v~ 311 (406)
T TIGR01849 232 NVIMRVPFPYPGAGRLVYPGFLQLAGFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTAEFYLQTID 311 (406)
T ss_pred HhhhccCccccCCCCcccCHHHHHHHHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcHHHHHHHHH
Confidence 0 00 00001111111111111100 01111111111 123333444444
Q ss_pred Hhcccc-----------cccccCCCC-CCEEEEecCCCCccchhHHHHHHHH---cCCC-eEEEEcCCCCCCCCc---cC
Q 024033 199 TVFYSD-----------EREILDKVE-TPCTIFQPSNDAVVPNSVAYYMQEK---MKGK-STVEIIEADGHFPQL---TA 259 (273)
Q Consensus 199 ~~~~~~-----------~~~~l~~i~-~P~lii~G~~D~~~~~~~~~~~~~~---~~~~-~~~~~i~~~gH~~~~---e~ 259 (273)
.+++.+ ..-.+++|+ +|++.|.|++|.++|+...+.+.+. ++.. ++....+++||.-.. ..
T Consensus 312 ~vf~~n~L~~G~l~v~G~~Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~ 391 (406)
T TIGR01849 312 VVFQQFLLPQGKFIVEGKRVDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRF 391 (406)
T ss_pred HHHHhCCccCCcEEECCEEecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhh
Confidence 444322 122468899 9999999999999999988877775 3532 445666789998766 34
Q ss_pred hHHHHHHHHHhhc
Q 024033 260 HLQLIDVLNKVLG 272 (273)
Q Consensus 260 p~~~~~~i~~fl~ 272 (273)
.+++...|.+||.
T Consensus 392 ~~~i~P~i~~wl~ 404 (406)
T TIGR01849 392 REEIYPLVREFIR 404 (406)
T ss_pred hhhhchHHHHHHH
Confidence 5666778888774
No 92
>COG0400 Predicted esterase [General function prediction only]
Probab=99.42 E-value=1e-11 Score=99.20 Aligned_cols=176 Identities=22% Similarity=0.238 Sum_probs=119.4
Q ss_pred CCceEEEecCCCCChhchhhhhhhhhcCceEEEEecCCCccccCC---CCCCCCCCcccc------cHHHHHHHHHHHHH
Q 024033 20 GKETLVLAHGFGGDQSIWDKITPVLSQHYRVLAFDWLFSGAILNK---DHQSLYNPVKYS------SYEAFADDLITLLE 90 (273)
Q Consensus 20 ~~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~---~~~~~~~~~~~~------s~~~~a~~l~~~~~ 90 (273)
..|.|||+||+|++...+-+....+..+++++.+- | .+..+ ....+++...|+ ..+.+++-+.+..+
T Consensus 17 ~~~~iilLHG~Ggde~~~~~~~~~~~P~~~~is~r--G--~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~ 92 (207)
T COG0400 17 AAPLLILLHGLGGDELDLVPLPELILPNATLVSPR--G--PVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAE 92 (207)
T ss_pred CCcEEEEEecCCCChhhhhhhhhhcCCCCeEEcCC--C--CccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHH
Confidence 34579999999999999888766677777777542 2 11110 000111111222 24455555566666
Q ss_pred HcCC--CceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHHhcccccc
Q 024033 91 ENDL--KSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASWASSFPRL 168 (273)
Q Consensus 91 ~~~~--~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (273)
+.++ ++++++|+|=|+++++.++.++|+.+++++++++.... .
T Consensus 93 ~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~--~--------------------------------- 137 (207)
T COG0400 93 EYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPL--E--------------------------------- 137 (207)
T ss_pred HhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCC--C---------------------------------
Confidence 6677 78999999999999999999999999999988653210 0
Q ss_pred ccCCCChhhHHHHHHHHHhcChhhHHHHHHHhcccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCC---CeEE
Q 024033 169 VVDTKDAPSVEKFENCLKRMRHEFALPLAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKG---KSTV 245 (273)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~---~~~~ 245 (273)
. . . . -..-.+|+++++|++|+++|...+..+++.+.. .++.
T Consensus 138 ---~---~----------~-~-------------------~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~ 181 (207)
T COG0400 138 ---P---E----------L-L-------------------PDLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEV 181 (207)
T ss_pred ---C---c----------c-c-------------------cccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEE
Confidence 0 0 0 0 000146999999999999999888777766532 3678
Q ss_pred EEcCCCCCCCCccChHHHHHHHHHhh
Q 024033 246 EIIEADGHFPQLTAHLQLIDVLNKVL 271 (273)
Q Consensus 246 ~~i~~~gH~~~~e~p~~~~~~i~~fl 271 (273)
..++ .||.+..|.-+...+.+.+++
T Consensus 182 ~~~~-~GH~i~~e~~~~~~~wl~~~~ 206 (207)
T COG0400 182 RWHE-GGHEIPPEELEAARSWLANTL 206 (207)
T ss_pred EEec-CCCcCCHHHHHHHHHHHHhcc
Confidence 8888 899998887777766665543
No 93
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.42 E-value=2.3e-11 Score=104.77 Aligned_cols=229 Identities=15% Similarity=0.166 Sum_probs=113.9
Q ss_pred CCceEEEecCCCCC-hhch-hhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHH----Hc
Q 024033 20 GKETLVLAHGFGGD-QSIW-DKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLE----EN 92 (273)
Q Consensus 20 ~~~~vvllHG~~~~-~~~w-~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~----~~ 92 (273)
..|.||++||+.++ .+.+ +.++..+++ +|+|+++..||+|.|.-..+ .-| -....+|+.++++ ..
T Consensus 124 ~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTp------r~f--~ag~t~Dl~~~v~~i~~~~ 195 (409)
T KOG1838|consen 124 TDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTP------RLF--TAGWTEDLREVVNHIKKRY 195 (409)
T ss_pred CCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCC------cee--ecCCHHHHHHHHHHHHHhC
Confidence 35889999998554 4555 445555544 89999999999999832211 112 1223445554444 44
Q ss_pred CCCceEEEEEChhHHHHHHHHhhCcc--cccceEEeecCCCcc-CCCCCCCCCChhhHHHHHHH-HHHhHHHHhc-cccc
Q 024033 93 DLKSTLFIGHSMSGMIGCIASVKKPE--LFKRLILIGTSPRYI-NTDDYEGGFEPSDIENLISN-VETNYASWAS-SFPR 167 (273)
Q Consensus 93 ~~~~~~lvGhS~GG~ia~~~a~~~p~--~v~~lvl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~ 167 (273)
...+...+|.||||++.+.+.....+ .+.+.+.++.+-..+ ..+.+..........+++.. +.+....... .+..
T Consensus 196 P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~ 275 (409)
T KOG1838|consen 196 PQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIETPLYRRFYNRALTLNLKRIVLRHRHTLFED 275 (409)
T ss_pred CCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHhcccchHHHHHHHHHhHHHHHhhhhhhhhhc
Confidence 55678999999999998777654332 244444444322111 00000000001111111110 1111000000 0000
Q ss_pred cccCCCCh--hhHHHHHHHHHhcChhhHHHHHH-HhcccccccccCCCCCCEEEEecCCCCccchhHHH-HHHHHcCCCe
Q 024033 168 LVVDTKDA--PSVEKFENCLKRMRHEFALPLAK-TVFYSDEREILDKVETPCTIFQPSNDAVVPNSVAY-YMQEKMKGKS 243 (273)
Q Consensus 168 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~-~~~~~~~~~~ 243 (273)
...-.... ..++++.+.+-. +.....-.. ..........+.+|++|+++|.+-+|+++|+.... ...+.-| +.
T Consensus 276 ~vd~d~~~~~~SvreFD~~~t~--~~~gf~~~deYY~~aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np-~v 352 (409)
T KOG1838|consen 276 PVDFDVILKSRSVREFDEALTR--PMFGFKSVDEYYKKASSSNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNP-NV 352 (409)
T ss_pred cchhhhhhhcCcHHHHHhhhhh--hhcCCCcHHHHHhhcchhhhcccccccEEEEecCCCCCCCcccCCHHHHhcCC-cE
Confidence 00000000 122333222210 000000011 11122344568999999999999999999986433 3333334 34
Q ss_pred EEEEcCCCCCCCCccC
Q 024033 244 TVEIIEADGHFPQLTA 259 (273)
Q Consensus 244 ~~~~i~~~gH~~~~e~ 259 (273)
-+.+..-+||.-++|.
T Consensus 353 ~l~~T~~GGHlgfleg 368 (409)
T KOG1838|consen 353 LLVITSHGGHLGFLEG 368 (409)
T ss_pred EEEEeCCCceeeeecc
Confidence 4555566899999887
No 94
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.34 E-value=1.9e-10 Score=90.76 Aligned_cols=181 Identities=18% Similarity=0.179 Sum_probs=104.7
Q ss_pred EEEecCCCCChhchh--hhhhhhhcC---ceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCCCceE
Q 024033 24 LVLAHGFGGDQSIWD--KITPVLSQH---YRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDLKSTL 98 (273)
Q Consensus 24 vvllHG~~~~~~~w~--~~~~~L~~~---~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~~~~~ 98 (273)
|+.||||.+++.+.. .+..++.++ .++.++|++- +.+...+.+.+++++...+.+.
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~-------------------~p~~a~~~l~~~i~~~~~~~~~ 62 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPP-------------------FPEEAIAQLEQLIEELKPENVV 62 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCc-------------------CHHHHHHHHHHHHHhCCCCCeE
Confidence 799999999887774 455566653 4566655422 1555567788888888777799
Q ss_pred EEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHHhccccccccCCCChhhH
Q 024033 99 FIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASWASSFPRLVVDTKDAPSV 178 (273)
Q Consensus 99 lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (273)
|||.||||+.|..+|.+++- ++ |+++++-.. ...++..+.. ... ..| +... ...
T Consensus 63 liGSSlGG~~A~~La~~~~~--~a-vLiNPav~p-----------~~~l~~~iG~-~~~-~~~---------~e~~-~~~ 116 (187)
T PF05728_consen 63 LIGSSLGGFYATYLAERYGL--PA-VLINPAVRP-----------YELLQDYIGE-QTN-PYT---------GESY-ELT 116 (187)
T ss_pred EEEEChHHHHHHHHHHHhCC--CE-EEEcCCCCH-----------HHHHHHhhCc-ccc-CCC---------Cccc-eec
Confidence 99999999999999999863 34 777754211 0011111100 000 000 0000 000
Q ss_pred HHHHHHHHhcChhhHHHHHHHhcccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCCCeEEEEcCCCCCCCCcc
Q 024033 179 EKFENCLKRMRHEFALPLAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKGKSTVEIIEADGHFPQLT 258 (273)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e 258 (273)
+.....++.. ......-..+++++.++.|.+++.+. ....+.+. ...+.+|++|-..
T Consensus 117 ~~~~~~l~~l-----------------~~~~~~~~~~~lvll~~~DEvLd~~~---a~~~~~~~-~~~i~~ggdH~f~-- 173 (187)
T PF05728_consen 117 EEHIEELKAL-----------------EVPYPTNPERYLVLLQTGDEVLDYRE---AVAKYRGC-AQIIEEGGDHSFQ-- 173 (187)
T ss_pred hHhhhhcceE-----------------eccccCCCccEEEEEecCCcccCHHH---HHHHhcCc-eEEEEeCCCCCCc--
Confidence 1111111110 00112235689999999999999843 23444544 3445677888654
Q ss_pred ChHHHHHHHHHhhc
Q 024033 259 AHLQLIDVLNKVLG 272 (273)
Q Consensus 259 ~p~~~~~~i~~fl~ 272 (273)
.-+.....|.+|+.
T Consensus 174 ~f~~~l~~i~~f~~ 187 (187)
T PF05728_consen 174 DFEEYLPQIIAFLQ 187 (187)
T ss_pred cHHHHHHHHHHhhC
Confidence 45666777777763
No 95
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.34 E-value=5.9e-12 Score=102.52 Aligned_cols=164 Identities=16% Similarity=0.130 Sum_probs=99.0
Q ss_pred CceEEEecCCCCChhchhhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcc--cc-----cHHHHHHHHHHHHHHc
Q 024033 21 KETLVLAHGFGGDQSIWDKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVK--YS-----SYEAFADDLITLLEEN 92 (273)
Q Consensus 21 ~~~vvllHG~~~~~~~w~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~--~~-----s~~~~a~~l~~~~~~~ 92 (273)
.|.||++|++.+-...-+.+.+.|++ +|.|++||+-+-... .+. ...... .. ..+...+++.+.++.+
T Consensus 14 ~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l 89 (218)
T PF01738_consen 14 RPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGA-PPS---DPEEAFAAMRELFAPRPEQVAADLQAAVDYL 89 (218)
T ss_dssp EEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS---CC---CHHCHHHHHHHCHHHSHHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCC-Ccc---chhhHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 47899999987766666788899988 899999998543331 111 000000 00 0234556664445443
Q ss_pred ---C---CCceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHHhcccc
Q 024033 93 ---D---LKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASWASSFP 166 (273)
Q Consensus 93 ---~---~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (273)
. .+++.++|.||||.+++.+|... ..+++.+..-+...
T Consensus 90 ~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~----------------------------------- 133 (218)
T PF01738_consen 90 RAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSP----------------------------------- 133 (218)
T ss_dssp HCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSS-----------------------------------
T ss_pred HhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCC-----------------------------------
Confidence 3 35799999999999999999887 57888776532000
Q ss_pred ccccCCCChhhHHHHHHHHHhcChhhHHHHHHHhcccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHc---CCCe
Q 024033 167 RLVVDTKDAPSVEKFENCLKRMRHEFALPLAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKM---KGKS 243 (273)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~---~~~~ 243 (273)
.. .......++++|+++++|++|+.++.+..+.+.+.+ ....
T Consensus 134 -------~~----------------------------~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~ 178 (218)
T PF01738_consen 134 -------PP----------------------------PPLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDV 178 (218)
T ss_dssp -------GG----------------------------GHHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTE
T ss_pred -------CC----------------------------cchhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcE
Confidence 00 000113456789999999999999998777766665 2237
Q ss_pred EEEEcCCCCCCCCccC
Q 024033 244 TVEIIEADGHFPQLTA 259 (273)
Q Consensus 244 ~~~~i~~~gH~~~~e~ 259 (273)
+++++++++|-.+...
T Consensus 179 ~~~~y~ga~HgF~~~~ 194 (218)
T PF01738_consen 179 EVHVYPGAGHGFANPS 194 (218)
T ss_dssp EEEEETT--TTTTSTT
T ss_pred EEEECCCCcccccCCC
Confidence 9999999999765543
No 96
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.34 E-value=2.8e-11 Score=97.73 Aligned_cols=198 Identities=19% Similarity=0.261 Sum_probs=127.4
Q ss_pred ceEEEecCCCCChhchhhhhhhhhcCceEEEEecCCCccccC--CCCC-C----------CCC-CcccccHHHHHHHHHH
Q 024033 22 ETLVLAHGFGGDQSIWDKITPVLSQHYRVLAFDWLFSGAILN--KDHQ-S----------LYN-PVKYSSYEAFADDLIT 87 (273)
Q Consensus 22 ~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~--~~~~-~----------~~~-~~~~~s~~~~a~~l~~ 87 (273)
|-||-.||.+++...|..+...-..+|.|+++|.||.|.|+. +... + -.+ +..|. +.....|+..
T Consensus 84 P~vV~fhGY~g~~g~~~~~l~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yy-yr~v~~D~~~ 162 (321)
T COG3458 84 PAVVQFHGYGGRGGEWHDMLHWAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYY-YRGVFLDAVR 162 (321)
T ss_pred ceEEEEeeccCCCCCccccccccccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceE-EeeehHHHHH
Confidence 678999999999999999998888899999999999998833 1110 0 001 11222 2222333332
Q ss_pred HHH------HcCCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHH
Q 024033 88 LLE------ENDLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASW 161 (273)
Q Consensus 88 ~~~------~~~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (273)
.++ ..+-+++.+.|.|-||.|++..++..| ++++++..=+ ++.. ++.|
T Consensus 163 ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~P---fl~d----------------------f~r~ 216 (321)
T COG3458 163 AVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYP---FLSD----------------------FPRA 216 (321)
T ss_pred HHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhccccccc---cccc----------------------chhh
Confidence 222 234568999999999999999999887 6888775422 1111 0111
Q ss_pred hccccccccCCCChhhHHHHHHHHHhcChhhHHHHHHHhcccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCC
Q 024033 162 ASSFPRLVVDTKDAPSVEKFENCLKRMRHEFALPLAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKG 241 (273)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~ 241 (273)
.. +.. .....++...++..+ +.......++...|......+|++|+++..|=.|.++||..+-.+.+.++.
T Consensus 217 i~----~~~----~~~ydei~~y~k~h~-~~e~~v~~TL~yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~ 287 (321)
T COG3458 217 IE----LAT----EGPYDEIQTYFKRHD-PKEAEVFETLSYFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTT 287 (321)
T ss_pred ee----ecc----cCcHHHHHHHHHhcC-chHHHHHHHHhhhhhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccC
Confidence 10 000 001111111122212 113344445555567777889999999999999999999998888888987
Q ss_pred CeEEEEcCCCCCCC
Q 024033 242 KSTVEIIEADGHFP 255 (273)
Q Consensus 242 ~~~~~~i~~~gH~~ 255 (273)
.+++.+++.-+|.-
T Consensus 288 ~K~i~iy~~~aHe~ 301 (321)
T COG3458 288 SKTIEIYPYFAHEG 301 (321)
T ss_pred CceEEEeecccccc
Confidence 77888888767754
No 97
>PRK10162 acetyl esterase; Provisional
Probab=99.32 E-value=2.2e-10 Score=98.64 Aligned_cols=102 Identities=19% Similarity=0.213 Sum_probs=70.7
Q ss_pred CCceEEEecCCC---CChhchhhhhhhhhc--CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCC
Q 024033 20 GKETLVLAHGFG---GDQSIWDKITPVLSQ--HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDL 94 (273)
Q Consensus 20 ~~~~vvllHG~~---~~~~~w~~~~~~L~~--~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~ 94 (273)
+.|.||++||-+ ++...|..+...|.+ ++.|+++|+|...... +. ....+..+..+.+.+..+.+++
T Consensus 80 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~-------~p-~~~~D~~~a~~~l~~~~~~~~~ 151 (318)
T PRK10162 80 SQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEAR-------FP-QAIEEIVAVCCYFHQHAEDYGI 151 (318)
T ss_pred CCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCC-------CC-CcHHHHHHHHHHHHHhHHHhCC
Confidence 347899999954 677788888888876 7999999998743321 11 1111122333344444555665
Q ss_pred --CceEEEEEChhHHHHHHHHhhC------cccccceEEeecC
Q 024033 95 --KSTLFIGHSMSGMIGCIASVKK------PELFKRLILIGTS 129 (273)
Q Consensus 95 --~~~~lvGhS~GG~ia~~~a~~~------p~~v~~lvl~~~~ 129 (273)
++++|+|+|+||.+++.++... |.++++++++.+.
T Consensus 152 d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~ 194 (318)
T PRK10162 152 NMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGL 194 (318)
T ss_pred ChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCc
Confidence 4799999999999999988753 3678888988754
No 98
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.31 E-value=4.3e-10 Score=94.15 Aligned_cols=106 Identities=17% Similarity=0.206 Sum_probs=83.9
Q ss_pred ceEEEecCCCCChhchhhhhhhhh----cCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcC----
Q 024033 22 ETLVLAHGFGGDQSIWDKITPVLS----QHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEEND---- 93 (273)
Q Consensus 22 ~~vvllHG~~~~~~~w~~~~~~L~----~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~---- 93 (273)
..||||+|.+|--+.|.+....|. ..+.|++..+.||-.++..... ..+...|+ +++.++...++++++-
T Consensus 3 ~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~-~~~~~~~s-L~~QI~hk~~~i~~~~~~~~ 80 (266)
T PF10230_consen 3 PLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKF-SPNGRLFS-LQDQIEHKIDFIKELIPQKN 80 (266)
T ss_pred EEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccc-cCCCCccC-HHHHHHHHHHHHHHHhhhhc
Confidence 468999999999999998888876 4699999999999876332100 01223354 9999999888888752
Q ss_pred --CCceEEEEEChhHHHHHHHHhhCc---ccccceEEeecC
Q 024033 94 --LKSTLFIGHSMSGMIGCIASVKKP---ELFKRLILIGTS 129 (273)
Q Consensus 94 --~~~~~lvGhS~GG~ia~~~a~~~p---~~v~~lvl~~~~ 129 (273)
..+++|+|||+|+++++++..+.| .+|.+++++-++
T Consensus 81 ~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPT 121 (266)
T PF10230_consen 81 KPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPT 121 (266)
T ss_pred CCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCc
Confidence 346999999999999999999999 889999988764
No 99
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.28 E-value=7.9e-11 Score=102.16 Aligned_cols=207 Identities=16% Similarity=0.152 Sum_probs=106.9
Q ss_pred CceEEEecCCCCChhc-hhhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHc---CCC
Q 024033 21 KETLVLAHGFGGDQSI-WDKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEEN---DLK 95 (273)
Q Consensus 21 ~~~vvllHG~~~~~~~-w~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~---~~~ 95 (273)
.|+||++-|+-+-... |+...++|.. ++.++++|.||.|.|..-. .. . + .+.+-+.+++.+... +-+
T Consensus 190 ~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~----l~-~--D-~~~l~~aVLd~L~~~p~VD~~ 261 (411)
T PF06500_consen 190 YPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWP----LT-Q--D-SSRLHQAVLDYLASRPWVDHT 261 (411)
T ss_dssp EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-----S--S----CCHHHHHHHHHHHHSTTEEEE
T ss_pred CCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCC----CC-c--C-HHHHHHHHHHHHhcCCccChh
Confidence 3566666666655545 4566677765 8999999999999984311 11 1 1 234556666666654 345
Q ss_pred ceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHH-HHhccccccccCCCC
Q 024033 96 STLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYA-SWASSFPRLVVDTKD 174 (273)
Q Consensus 96 ~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 174 (273)
++.++|-|+||.+|..+|..++.|++++|..++.--.+ +..... ....+..+. .+...+ +...
T Consensus 262 RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~--------ft~~~~---~~~~P~my~d~LA~rl-----G~~~ 325 (411)
T PF06500_consen 262 RVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHF--------FTDPEW---QQRVPDMYLDVLASRL-----GMAA 325 (411)
T ss_dssp EEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCG--------GH-HHH---HTTS-HHHHHHHHHHC-----T-SC
T ss_pred heEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhh--------hccHHH---HhcCCHHHHHHHHHHh-----CCcc
Confidence 79999999999999999999999999999988742111 110000 000000000 000000 1000
Q ss_pred hhhHHHHHHHHHhcChhhHHHHHHHhccccc-c-ccc--CCCCCCEEEEecCCCCccchhHHHHHHHHcCCCeEEEEcCC
Q 024033 175 APSVEKFENCLKRMRHEFALPLAKTVFYSDE-R-EIL--DKVETPCTIFQPSNDAVVPNSVAYYMQEKMKGKSTVEIIEA 250 (273)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~l--~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~ 250 (273)
...+.+...+. .-.+ . -.+ .+..+|+|.+.|++|+++|.+-.+.+++.-.+ .+...|+.
T Consensus 326 -~~~~~l~~el~---------------~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~~-gk~~~~~~ 388 (411)
T PF06500_consen 326 -VSDESLRGELN---------------KFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAESSTD-GKALRIPS 388 (411)
T ss_dssp -E-HHHHHHHGG---------------GGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTBTT--EEEEE-S
T ss_pred -CCHHHHHHHHH---------------hcCcchhccccCCCCCcceEEeecCCCCCCCHHHHHHHHhcCCC-CceeecCC
Confidence 01111111110 0011 1 133 66789999999999999998878777775443 36667775
Q ss_pred CC-CCCCccChHHHHHHHH
Q 024033 251 DG-HFPQLTAHLQLIDVLN 268 (273)
Q Consensus 251 ~g-H~~~~e~p~~~~~~i~ 268 (273)
.. |+-....-..+.+.|+
T Consensus 389 ~~~~~gy~~al~~~~~Wl~ 407 (411)
T PF06500_consen 389 KPLHMGYPQALDEIYKWLE 407 (411)
T ss_dssp SSHHHHHHHHHHHHHHHHH
T ss_pred CccccchHHHHHHHHHHHH
Confidence 44 5554444444444443
No 100
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.27 E-value=1.4e-11 Score=83.22 Aligned_cols=73 Identities=23% Similarity=0.422 Sum_probs=59.0
Q ss_pred ccceEEecC---CCceEEEecCCCCChhchhhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHH
Q 024033 11 AMNAKIIGS---GKETLVLAHGFGGDQSIWDKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLI 86 (273)
Q Consensus 11 ~~~~~~~G~---~~~~vvllHG~~~~~~~w~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~ 86 (273)
+++++.+-+ .+.+|+++||++.++..|..++..|.+ +|.|+++|+||||.|+... ....+++++++|+.
T Consensus 3 ~L~~~~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~r-------g~~~~~~~~v~D~~ 75 (79)
T PF12146_consen 3 KLFYRRWKPENPPKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKR-------GHIDSFDDYVDDLH 75 (79)
T ss_pred EEEEEEecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcc-------cccCCHHHHHHHHH
Confidence 456666642 245899999999999999999999998 8999999999999995321 12356999999999
Q ss_pred HHHH
Q 024033 87 TLLE 90 (273)
Q Consensus 87 ~~~~ 90 (273)
.+++
T Consensus 76 ~~~~ 79 (79)
T PF12146_consen 76 QFIQ 79 (79)
T ss_pred HHhC
Confidence 8874
No 101
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.27 E-value=1.2e-10 Score=99.96 Aligned_cols=232 Identities=18% Similarity=0.228 Sum_probs=131.4
Q ss_pred CCceEEEecCCCCChhchh-----hhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcC
Q 024033 20 GKETLVLAHGFGGDQSIWD-----KITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEEND 93 (273)
Q Consensus 20 ~~~~vvllHG~~~~~~~w~-----~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~ 93 (273)
.++|+|.+|-+.-..-+|+ ..+..|.+ +..|..+|+++=..+... ..-..|- .+.+.+.+..+.+..+
T Consensus 106 ~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~-----~~~edYi-~e~l~~aid~v~~itg 179 (445)
T COG3243 106 LKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAA-----KNLEDYI-LEGLSEAIDTVKDITG 179 (445)
T ss_pred CCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhh-----ccHHHHH-HHHHHHHHHHHHHHhC
Confidence 4568999999988777774 34555544 899999999886555221 1111222 2444455556666778
Q ss_pred CCceEEEEEChhHHHHHHHHhhCccc-ccceEEeecCCCccCCCCCCCCCChh-hHHHHHHHH-----------HHhHH-
Q 024033 94 LKSTLFIGHSMSGMIGCIASVKKPEL-FKRLILIGTSPRYINTDDYEGGFEPS-DIENLISNV-----------ETNYA- 159 (273)
Q Consensus 94 ~~~~~lvGhS~GG~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----------~~~~~- 159 (273)
.+++.++|++.||++...+++.+|.+ |+.++++.+.-.+... .....+... .++..-..+ ...|.
T Consensus 180 ~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~-g~l~if~n~~~~~~~~~~i~~~g~lpg~~ma~~F~m 258 (445)
T COG3243 180 QKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHA-GDLGIFANEATIEALDADIVQKGILPGWYMAIVFFL 258 (445)
T ss_pred ccccceeeEecchHHHHHHHHhhhhcccccceeeecchhhccc-cccccccCHHHHHHHHhhhhhccCCChHHHHHHHHh
Confidence 89999999999999999998888888 9999999875433211 111111111 111111000 00000
Q ss_pred ------HHhccccccccCCCChhhHHHHHHHHH--hcChhhHHHHHHHhcc-----------cccccccCCCCCCEEEEe
Q 024033 160 ------SWASSFPRLVVDTKDAPSVEKFENCLK--RMRHEFALPLAKTVFY-----------SDEREILDKVETPCTIFQ 220 (273)
Q Consensus 160 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-----------~~~~~~l~~i~~P~lii~ 220 (273)
.|. +|.+.+.....+...+..+-... ++.......+.+.++. ....-.+.+|+||++++.
T Consensus 259 Lrpndliw~-~fV~nyl~ge~pl~fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l~~g~~~v~G~~VdL~~It~pvy~~a 337 (445)
T COG3243 259 LRPNDLIWN-YFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSEYLRNFYLENRLIRGGLEVSGTMVDLGDITCPVYNLA 337 (445)
T ss_pred cCccccchH-HHHHHhcCCCCCCchhHHHhhCCCccCchHHHHHHHHHHHHhChhhccceEECCEEechhhcccceEEEe
Confidence 111 11111222211111111100000 1111111222222221 122335789999999999
Q ss_pred cCCCCccchhHHHHHHHHcCCCeEEEEcCCCCCCCCccCh
Q 024033 221 PSNDAVVPNSVAYYMQEKMKGKSTVEIIEADGHFPQLTAH 260 (273)
Q Consensus 221 G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p 260 (273)
|++|.+.|.+.....++.+++.+++.. -++||...+-+|
T Consensus 338 ~~~DhI~P~~Sv~~g~~l~~g~~~f~l-~~sGHIa~vVN~ 376 (445)
T COG3243 338 AEEDHIAPWSSVYLGARLLGGEVTFVL-SRSGHIAGVVNP 376 (445)
T ss_pred ecccccCCHHHHHHHHHhcCCceEEEE-ecCceEEEEeCC
Confidence 999999999999988988887555544 458998776554
No 102
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.23 E-value=7.5e-10 Score=91.39 Aligned_cols=208 Identities=16% Similarity=0.170 Sum_probs=114.4
Q ss_pred CceEEEecCCCCChhchhhhhhhhh-c-C--ceEEEEecCCCcccc----------CCCCCCCCCCcccccHHHHHHHHH
Q 024033 21 KETLVLAHGFGGDQSIWDKITPVLS-Q-H--YRVLAFDWLFSGAIL----------NKDHQSLYNPVKYSSYEAFADDLI 86 (273)
Q Consensus 21 ~~~vvllHG~~~~~~~w~~~~~~L~-~-~--~~via~D~~G~G~S~----------~~~~~~~~~~~~~~s~~~~a~~l~ 86 (273)
..|.||+||++++...+..++.++. + + -.++..+.---|.=. .|...=.++...-.++...++.+.
T Consensus 11 ~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl~ 90 (255)
T PF06028_consen 11 TTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWLK 90 (255)
T ss_dssp -EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHHH
T ss_pred CCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHHH
Confidence 3579999999999999999999997 4 3 344444443333210 110000011011024666666666
Q ss_pred HHHHH----cCCCceEEEEEChhHHHHHHHHhhCcc-----cccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHh
Q 024033 87 TLLEE----NDLKSTLFIGHSMSGMIGCIASVKKPE-----LFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETN 157 (273)
Q Consensus 87 ~~~~~----~~~~~~~lvGhS~GG~ia~~~a~~~p~-----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (273)
.++.. .+++++.+|||||||++++.++..+.. .+.++|.++++-........ ....
T Consensus 91 ~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~-----~~~~---------- 155 (255)
T PF06028_consen 91 KVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMND-----DQNQ---------- 155 (255)
T ss_dssp HHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC------TTT----------
T ss_pred HHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccc-----cchh----------
Confidence 66654 488999999999999999999877432 58999999875322111000 0000
Q ss_pred HHHHhccccccccCCCChhhHHHHHHHHHhcChhhHHHHHHHhcccccccccCCCCCCEEEEecC------CCCccchhH
Q 024033 158 YASWASSFPRLVVDTKDAPSVEKFENCLKRMRHEFALPLAKTVFYSDEREILDKVETPCTIFQPS------NDAVVPNSV 231 (273)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~------~D~~~~~~~ 231 (273)
......+ |......++.+... .+..++ -++.+|-|.|+ .|..+|...
T Consensus 156 -------~~~~~~g---p~~~~~~y~~l~~~----------------~~~~~p-~~i~VLnI~G~~~~g~~sDG~V~~~S 208 (255)
T PF06028_consen 156 -------NDLNKNG---PKSMTPMYQDLLKN----------------RRKNFP-KNIQVLNIYGDLEDGSNSDGIVPNAS 208 (255)
T ss_dssp -------T-CSTT----BSS--HHHHHHHHT----------------HGGGST-TT-EEEEEEEESBTTCSBTSSSBHHH
T ss_pred -------hhhcccC---CcccCHHHHHHHHH----------------HHhhCC-CCeEEEEEecccCCCCCCCeEEeHHH
Confidence 0000001 11111112222211 011111 15678999998 799999988
Q ss_pred HHHHHHHcCC---CeEEEEcCC--CCCCCCccChHHHHHHHHHhh
Q 024033 232 AYYMQEKMKG---KSTVEIIEA--DGHFPQLTAHLQLIDVLNKVL 271 (273)
Q Consensus 232 ~~~~~~~~~~---~~~~~~i~~--~gH~~~~e~p~~~~~~i~~fl 271 (273)
+..+...+.+ ..+-.+|.| +.|.-..|+| .+.+.|.+||
T Consensus 209 s~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~-~V~~~I~~FL 252 (255)
T PF06028_consen 209 SLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENP-QVDKLIIQFL 252 (255)
T ss_dssp HCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCH-HHHHHHHHHH
T ss_pred HHHHHHHhhcccCceEEEEEECCCCccccCCCCH-HHHHHHHHHh
Confidence 8777766643 123344543 6899988888 4678899987
No 103
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.22 E-value=9.3e-11 Score=95.61 Aligned_cols=103 Identities=20% Similarity=0.304 Sum_probs=67.9
Q ss_pred CceEEEecCCCCChhchhhhhhhhh---------cCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHH
Q 024033 21 KETLVLAHGFGGDQSIWDKITPVLS---------QHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEE 91 (273)
Q Consensus 21 ~~~vvllHG~~~~~~~w~~~~~~L~---------~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~ 91 (273)
+.|||||||..++...|+.+...+. .++++++.|+......-... .. ....+...+.+..+++.
T Consensus 4 g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~---~l----~~q~~~~~~~i~~i~~~ 76 (225)
T PF07819_consen 4 GIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGR---TL----QRQAEFLAEAIKYILEL 76 (225)
T ss_pred CCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccccc---cH----HHHHHHHHHHHHHHHHh
Confidence 3589999999999888877766652 14789999986643220110 00 01122233334445554
Q ss_pred c-----CCCceEEEEEChhHHHHHHHHhhCc---ccccceEEeecCC
Q 024033 92 N-----DLKSTLFIGHSMSGMIGCIASVKKP---ELFKRLILIGTSP 130 (273)
Q Consensus 92 ~-----~~~~~~lvGhS~GG~ia~~~a~~~p---~~v~~lvl~~~~~ 130 (273)
+ +.++++||||||||.++..+....+ +.|+.+|.++++-
T Consensus 77 ~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh 123 (225)
T PF07819_consen 77 YKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPH 123 (225)
T ss_pred hhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCC
Confidence 4 5678999999999999987776543 5799999998753
No 104
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.22 E-value=2.1e-10 Score=90.71 Aligned_cols=236 Identities=16% Similarity=0.201 Sum_probs=126.5
Q ss_pred EEEecCCCCChhchhhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCccccc--HHHHHHHHHHHHHHcCCCceEEE
Q 024033 24 LVLAHGFGGDQSIWDKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSS--YEAFADDLITLLEENDLKSTLFI 100 (273)
Q Consensus 24 vvllHG~~~~~~~w~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s--~~~~a~~l~~~~~~~~~~~~~lv 100 (273)
|+.--+++.-...++++...+.+ +|+|..+|+||.|.|+.+. .+. ...+|.+ ..++...|..+-+.+..-+-.+|
T Consensus 33 ~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~-~~~-~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~v 110 (281)
T COG4757 33 LVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPAS-LSG-SQWRYLDWARLDFPAALAALKKALPGHPLYFV 110 (281)
T ss_pred EEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccc-ccc-CccchhhhhhcchHHHHHHHHhhCCCCceEEe
Confidence 44444556666777889998888 8999999999999995332 111 1122211 22333333333344445578999
Q ss_pred EEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHHhccccccccCC--CChhh-
Q 024033 101 GHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASWASSFPRLVVDT--KDAPS- 177 (273)
Q Consensus 101 GhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~- 177 (273)
|||+||-+...+. ++| ++.+..+.++.+.+.........+.. + .+....-.....|..++...+.+. +.+..
T Consensus 111 gHS~GGqa~gL~~-~~~-k~~a~~vfG~gagwsg~m~~~~~l~~--~-~l~~lv~p~lt~w~g~~p~~l~G~G~d~p~~v 185 (281)
T COG4757 111 GHSFGGQALGLLG-QHP-KYAAFAVFGSGAGWSGWMGLRERLGA--V-LLWNLVGPPLTFWKGYMPKDLLGLGSDLPGTV 185 (281)
T ss_pred eccccceeecccc-cCc-ccceeeEeccccccccchhhhhcccc--e-eeccccccchhhccccCcHhhcCCCccCcchH
Confidence 9999998754444 455 66666666664432111100000000 0 000000001112222222222222 22221
Q ss_pred HHHHHHHHHhcChhhHHHHHHHhcccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCCC-eEEEEcCC----CC
Q 024033 178 VEKFENCLKRMRHEFALPLAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKGK-STVEIIEA----DG 252 (273)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~-~~~~~i~~----~g 252 (273)
..+..+ +.+.+...+. .-.....++..+.+.+|+.++...+|+.+|+.....+.+.+++. .+...++. .|
T Consensus 186 ~RdW~R-wcR~p~y~fd----dp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lG 260 (281)
T COG4757 186 MRDWAR-WCRHPRYYFD----DPAMRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFASFYRNAPLEMRDLPRAEGPLG 260 (281)
T ss_pred HHHHHH-HhcCcccccc----ChhHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhhcCcccceecCcccCccc
Confidence 222222 2222211100 00011245567889999999999999999999999988887753 23333433 49
Q ss_pred CCCCccCh-HHHHHHHHHhh
Q 024033 253 HFPQLTAH-LQLIDVLNKVL 271 (273)
Q Consensus 253 H~~~~e~p-~~~~~~i~~fl 271 (273)
|+-..-+| |.+.+.+.+|+
T Consensus 261 H~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 261 HMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred chhhhccchHHHHHHHHHhh
Confidence 99888887 77766665554
No 105
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.21 E-value=6.3e-10 Score=92.86 Aligned_cols=232 Identities=14% Similarity=0.107 Sum_probs=82.8
Q ss_pred CceEEEecCCCCChh---chhhhhhhhhc-CceEEEEecC----CCccccCCCCCCCCCCcccccHHHHHHHHHHHHHH-
Q 024033 21 KETLVLAHGFGGDQS---IWDKITPVLSQ-HYRVLAFDWL----FSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEE- 91 (273)
Q Consensus 21 ~~~vvllHG~~~~~~---~w~~~~~~L~~-~~~via~D~~----G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~- 91 (273)
+..||||-|+++.-. ....+...|.+ +|.|+-+-+. |+|. .|++.-++||.++++.
T Consensus 33 ~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~---------------~SL~~D~~eI~~~v~yl 97 (303)
T PF08538_consen 33 PNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGT---------------SSLDRDVEEIAQLVEYL 97 (303)
T ss_dssp SSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S-----------------HHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCc---------------chhhhHHHHHHHHHHHH
Confidence 347999999987543 34678888976 8999988763 3332 3477777777766653
Q ss_pred --c-----CCCceEEEEEChhHHHHHHHHhhC-----cccccceEEeecCCCccCCCCCCCCCCh-hhHHHHHHHHHHhH
Q 024033 92 --N-----DLKSTLFIGHSMSGMIGCIASVKK-----PELFKRLILIGTSPRYINTDDYEGGFEP-SDIENLISNVETNY 158 (273)
Q Consensus 92 --~-----~~~~~~lvGhS~GG~ia~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 158 (273)
. +-++++|+|||.|.=-++.+..+. ...|.+.|+-++.... +.+...... ...++..+..+...
T Consensus 98 r~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDR---Ea~~~~~~~~~~~~~~v~~A~~~i 174 (303)
T PF08538_consen 98 RSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDR---EAILNFLGEREAYEELVALAKELI 174 (303)
T ss_dssp HHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---T---TSTTTSHHH---HHHHHHHHHHHH
T ss_pred HHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCCh---hHhhhcccchHHHHHHHHHHHHHH
Confidence 3 356899999999999988887654 2679999998874321 111101101 11233332222111
Q ss_pred HHHh-cccccc-ccCCCC-hhhHHHHHHHHHhcChhhHHH-HHHHhcccccccccCCCCCCEEEEecCCCCccchhHH-H
Q 024033 159 ASWA-SSFPRL-VVDTKD-APSVEKFENCLKRMRHEFALP-LAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSVA-Y 233 (273)
Q Consensus 159 ~~~~-~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~-~ 233 (273)
..-. ....+. ...... ..-+.+++ .+.-..+...-. +...+....+++.+.+|++|+|++.+++|..+|+..- +
T Consensus 175 ~~g~~~~~lp~~~~~~~~~~~PiTA~R-f~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~ 253 (303)
T PF08538_consen 175 AEGKGDEILPREFTPLVFYDTPITAYR-FLSLASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKE 253 (303)
T ss_dssp HCT-TT-GG----GGTTT-SS---HHH-HHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT---------
T ss_pred HcCCCCceeeccccccccCCCcccHHH-HHhccCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceeccccccc
Confidence 1000 000000 000000 00111111 111111111111 1222223345567899999999999999999988652 2
Q ss_pred HHHHHcCCC-------eEEEEcCCCCCCCCccChH----HHHHHHHHhh
Q 024033 234 YMQEKMKGK-------STVEIIEADGHFPQLTAHL----QLIDVLNKVL 271 (273)
Q Consensus 234 ~~~~~~~~~-------~~~~~i~~~gH~~~~e~p~----~~~~~i~~fl 271 (273)
.+.+++... ..-.+||||.|.+--+..+ .+.+.+.+||
T Consensus 254 ~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl 302 (303)
T PF08538_consen 254 ALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFL 302 (303)
T ss_dssp -------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccC
Confidence 333333211 1234789999988754433 4666666665
No 106
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.19 E-value=2.2e-10 Score=92.79 Aligned_cols=172 Identities=20% Similarity=0.244 Sum_probs=88.1
Q ss_pred CceEEEecCCCCChhchhhhhhh----hhc-CceEEEEecC-----CCcccc-----------CCCCCCCCCCc----cc
Q 024033 21 KETLVLAHGFGGDQSIWDKITPV----LSQ-HYRVLAFDWL-----FSGAIL-----------NKDHQSLYNPV----KY 75 (273)
Q Consensus 21 ~~~vvllHG~~~~~~~w~~~~~~----L~~-~~~via~D~~-----G~G~S~-----------~~~~~~~~~~~----~~ 75 (273)
++.||||||++.|+..++.+... |.+ .++.+.+|-| +-|... .....++++.. .+
T Consensus 4 k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~ 83 (212)
T PF03959_consen 4 KPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHEY 83 (212)
T ss_dssp --EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGGG
T ss_pred CceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcccc
Confidence 46799999999999999766555 555 6787777643 221110 00111122222 24
Q ss_pred ccHHHHHHHHHHHHHHcCCCceEEEEEChhHHHHHHHHhhCcc--------cccceEEeecCCCccCCCCCCCCCChhhH
Q 024033 76 SSYEAFADDLITLLEENDLKSTLFIGHSMSGMIGCIASVKKPE--------LFKRLILIGTSPRYINTDDYEGGFEPSDI 147 (273)
Q Consensus 76 ~s~~~~a~~l~~~~~~~~~~~~~lvGhS~GG~ia~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 147 (273)
..+++-.+.+.+++++.|. =.-|+|.|-||.+|..++..... .++-+|++++....
T Consensus 84 ~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~--------------- 147 (212)
T PF03959_consen 84 EGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPP--------------- 147 (212)
T ss_dssp ---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----E---------------
T ss_pred cCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCC---------------
Confidence 5577888888888887652 24699999999999888764321 24444544432100
Q ss_pred HHHHHHHHHhHHHHhccccccccCCCChhhHHHHHHHHHhcChhhHHHHHHHhcccccccccCCCCCCEEEEecCCCCcc
Q 024033 148 ENLISNVETNYASWASSFPRLVVDTKDAPSVEKFENCLKRMRHEFALPLAKTVFYSDEREILDKVETPCTIFQPSNDAVV 227 (273)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~ 227 (273)
.+. .. +.. .-.+|++|++-|+|++|.++
T Consensus 148 --------------------------~~~-----------~~--------------~~~-~~~~i~iPtlHv~G~~D~~~ 175 (212)
T PF03959_consen 148 --------------------------DPD-----------YQ--------------ELY-DEPKISIPTLHVIGENDPVV 175 (212)
T ss_dssp --------------------------EE------------GT--------------TTT---TT---EEEEEEETT-SSS
T ss_pred --------------------------chh-----------hh--------------hhh-ccccCCCCeEEEEeCCCCCc
Confidence 000 00 000 23556899999999999999
Q ss_pred chhHHHHHHHHcCCCeEEEEcCCCCCCCCccChH
Q 024033 228 PNSVAYYMQEKMKGKSTVEIIEADGHFPQLTAHL 261 (273)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~ 261 (273)
+++..+.+.+...+..+++..+ +||.++....+
T Consensus 176 ~~~~s~~L~~~~~~~~~v~~h~-gGH~vP~~~~~ 208 (212)
T PF03959_consen 176 PPERSEALAEMFDPDARVIEHD-GGHHVPRKKED 208 (212)
T ss_dssp -HHHHHHHHHHHHHHEEEEEES-SSSS----HHH
T ss_pred chHHHHHHHHhccCCcEEEEEC-CCCcCcCChhh
Confidence 9888888888776424555555 79999886654
No 107
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.14 E-value=4.1e-09 Score=86.60 Aligned_cols=167 Identities=17% Similarity=0.184 Sum_probs=115.4
Q ss_pred cCCC-ceEEEecCCCCChhchhhhhhhhhc-CceEEEEecCCC-ccccCCCC--CCCCCC---cccccHHHHHHHHHHHH
Q 024033 18 GSGK-ETLVLAHGFGGDQSIWDKITPVLSQ-HYRVLAFDWLFS-GAILNKDH--QSLYNP---VKYSSYEAFADDLITLL 89 (273)
Q Consensus 18 G~~~-~~vvllHG~~~~~~~w~~~~~~L~~-~~~via~D~~G~-G~S~~~~~--~~~~~~---~~~~s~~~~a~~l~~~~ 89 (273)
|.+. |.||++|++.+-....+.+...|++ +|.|++||+-+. |.+ .... ...... .... ......|+.+.+
T Consensus 23 ~~~~~P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~d~~a~~ 100 (236)
T COG0412 23 GAGGFPGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDP-TDIEDEPAELETGLVERVD-PAEVLADIDAAL 100 (236)
T ss_pred cCCCCCEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCC-CcccccHHHHhhhhhccCC-HHHHHHHHHHHH
Confidence 4443 7899999998877889999999988 899999999773 322 1110 000000 0111 356666766666
Q ss_pred HHc---C---CCceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHHhc
Q 024033 90 EEN---D---LKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASWAS 163 (273)
Q Consensus 90 ~~~---~---~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (273)
+.+ . .+++.++|.||||.+++.++.+.| .|++.+..-+....
T Consensus 101 ~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~------------------------------- 148 (236)
T COG0412 101 DYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIA------------------------------- 148 (236)
T ss_pred HHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCC-------------------------------
Confidence 554 2 457999999999999999999988 67777754321100
Q ss_pred cccccccCCCChhhHHHHHHHHHhcChhhHHHHHHHhcccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCC--
Q 024033 164 SFPRLVVDTKDAPSVEKFENCLKRMRHEFALPLAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKG-- 241 (273)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~-- 241 (273)
.. .....++++|+++..|+.|..+|......+.+.+..
T Consensus 149 --------~~--------------------------------~~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~ 188 (236)
T COG0412 149 --------DD--------------------------------TADAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAG 188 (236)
T ss_pred --------Cc--------------------------------ccccccccCcEEEEecccCCCCChhHHHHHHHHHHhcC
Confidence 00 000356789999999999999998877766665532
Q ss_pred -CeEEEEcCCCCCCCCcc
Q 024033 242 -KSTVEIIEADGHFPQLT 258 (273)
Q Consensus 242 -~~~~~~i~~~gH~~~~e 258 (273)
..++++++++.|-.+.+
T Consensus 189 ~~~~~~~y~ga~H~F~~~ 206 (236)
T COG0412 189 VKVDLEIYPGAGHGFAND 206 (236)
T ss_pred CCeeEEEeCCCccccccC
Confidence 26789999998987755
No 108
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.14 E-value=4.1e-10 Score=92.71 Aligned_cols=100 Identities=17% Similarity=0.220 Sum_probs=84.9
Q ss_pred ceEEEecCCCCChhchhhhhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcC-CCceEEE
Q 024033 22 ETLVLAHGFGGDQSIWDKITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEEND-LKSTLFI 100 (273)
Q Consensus 22 ~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~-~~~~~lv 100 (273)
+||.|+|+.++...+|.++..+|.....|++++.+|+|.-..+ ..+++++++.-.+.|.+.. -.+++|+
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~~~v~~l~a~g~~~~~~~----------~~~l~~~a~~yv~~Ir~~QP~GPy~L~ 70 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPLLPVYGLQAPGYGAGEQP----------FASLDDMAAAYVAAIRRVQPEGPYVLL 70 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccCceeeccccCcccccccc----------cCCHHHHHHHHHHHHHHhCCCCCEEEE
Confidence 5799999999999999999999999999999999999854222 2359999999888777763 4589999
Q ss_pred EEChhHHHHHHHHhh---CcccccceEEeecCCC
Q 024033 101 GHSMSGMIGCIASVK---KPELFKRLILIGTSPR 131 (273)
Q Consensus 101 GhS~GG~ia~~~a~~---~p~~v~~lvl~~~~~~ 131 (273)
|||+||.+|+.+|.+ ..+.|..|+++|+.+.
T Consensus 71 G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 71 GWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred eeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 999999999999964 4458999999998765
No 109
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=99.13 E-value=2e-09 Score=86.30 Aligned_cols=95 Identities=14% Similarity=0.148 Sum_probs=72.8
Q ss_pred EecCCC--CChhchhhhhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHH-HcCCCceEEEEE
Q 024033 26 LAHGFG--GDQSIWDKITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLE-ENDLKSTLFIGH 102 (273)
Q Consensus 26 llHG~~--~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~-~~~~~~~~lvGh 102 (273)
++|+.+ ++...|.++...|...++|+++|++|+|.+.... .+++.+++...+.+. ..+..+++++||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~~g~~~~~~~~----------~~~~~~~~~~~~~l~~~~~~~~~~l~g~ 71 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRGRRDVSALPLPGFGPGEPLP----------ASADALVEAQAEAVLRAAGGRPFVLVGH 71 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCCCccEEEecCCCCCCCCCCC----------CCHHHHHHHHHHHHHHhcCCCCeEEEEE
Confidence 455544 6778899999999999999999999998763221 237777776665443 345678999999
Q ss_pred ChhHHHHHHHHhh---CcccccceEEeecCC
Q 024033 103 SMSGMIGCIASVK---KPELFKRLILIGTSP 130 (273)
Q Consensus 103 S~GG~ia~~~a~~---~p~~v~~lvl~~~~~ 130 (273)
||||.++..++.+ .++.+.+++++++.+
T Consensus 72 s~Gg~~a~~~a~~l~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 72 SSGGLLAHAVAARLEARGIPPAAVVLLDTYP 102 (212)
T ss_pred CHHHHHHHHHHHHHHhCCCCCcEEEEEccCC
Confidence 9999999888875 456789999887643
No 110
>PRK10115 protease 2; Provisional
Probab=99.05 E-value=5.9e-09 Score=98.27 Aligned_cols=198 Identities=15% Similarity=0.169 Sum_probs=115.2
Q ss_pred CceEEEecCCCCCh--hchhhhhhhh-hcCceEEEEecCCCccccCCCCC-CCCCCcccccHHHHHHHHHHHHHHc--CC
Q 024033 21 KETLVLAHGFGGDQ--SIWDKITPVL-SQHYRVLAFDWLFSGAILNKDHQ-SLYNPVKYSSYEAFADDLITLLEEN--DL 94 (273)
Q Consensus 21 ~~~vvllHG~~~~~--~~w~~~~~~L-~~~~~via~D~~G~G~S~~~~~~-~~~~~~~~~s~~~~a~~l~~~~~~~--~~ 94 (273)
.|.||.+||-.+.+ ..|......| +.+|-|+.++.||.|.=-+..+. +... .+..+++++++.+..++++- +-
T Consensus 445 ~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~-~k~~~~~D~~a~~~~Lv~~g~~d~ 523 (686)
T PRK10115 445 NPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFL-KKKNTFNDYLDACDALLKLGYGSP 523 (686)
T ss_pred CCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhh-cCCCcHHHHHHHHHHHHHcCCCCh
Confidence 47899999966554 3465555555 45899999999997643111100 0011 11235888887777777652 23
Q ss_pred CceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHHhccccccccCCCC
Q 024033 95 KSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASWASSFPRLVVDTKD 174 (273)
Q Consensus 95 ~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (273)
+++.+.|.|.||+++..++.++|++++++|...+....+.. . .. ..+ ......+..| +..
T Consensus 524 ~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~---~--~~-~~~----p~~~~~~~e~---------G~p- 583 (686)
T PRK10115 524 SLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTT---M--LD-ESI----PLTTGEFEEW---------GNP- 583 (686)
T ss_pred HHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhh---c--cc-CCC----CCChhHHHHh---------CCC-
Confidence 57999999999999999999999999999976543221100 0 00 000 0000011111 111
Q ss_pred hhhHHHHHHHHHhcChhhHHHHHHHhcccccccccCCCCCCE-EEEecCCCCccchhHHHHHHHHcCC---CeEEEEc--
Q 024033 175 APSVEKFENCLKRMRHEFALPLAKTVFYSDEREILDKVETPC-TIFQPSNDAVVPNSVAYYMQEKMKG---KSTVEII-- 248 (273)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~-lii~G~~D~~~~~~~~~~~~~~~~~---~~~~~~i-- 248 (273)
.. .+..+.+....| -..+.+++.|+ |+++|.+|.-||+..+.++...+.. ..+.+++
T Consensus 584 -~~-~~~~~~l~~~SP---------------~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~ 646 (686)
T PRK10115 584 -QD-PQYYEYMKSYSP---------------YDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCT 646 (686)
T ss_pred -CC-HHHHHHHHHcCc---------------hhccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEe
Confidence 00 111112222222 12345678995 5679999999999877777665532 1356677
Q ss_pred -CCCCCCCC
Q 024033 249 -EADGHFPQ 256 (273)
Q Consensus 249 -~~~gH~~~ 256 (273)
+++||.--
T Consensus 647 ~~~~GHg~~ 655 (686)
T PRK10115 647 DMDSGHGGK 655 (686)
T ss_pred cCCCCCCCC
Confidence 89999843
No 111
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=99.05 E-value=4.8e-10 Score=99.55 Aligned_cols=92 Identities=14% Similarity=0.124 Sum_probs=69.6
Q ss_pred CChhchhhhhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCCCceEEEEEChhHHHHHH
Q 024033 32 GDQSIWDKITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDLKSTLFIGHSMSGMIGCI 111 (273)
Q Consensus 32 ~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~~~~~lvGhS~GG~ia~~ 111 (273)
.....|..+++.|.+...+...|++|+|++-+.. +.... .++++.+.+.++.++.+.++++|+||||||++++.
T Consensus 105 ~~~~~~~~li~~L~~~GY~~~~dL~g~gYDwR~~-----~~~~~-~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~ 178 (440)
T PLN02733 105 DEVYYFHDMIEQLIKWGYKEGKTLFGFGYDFRQS-----NRLPE-TMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKC 178 (440)
T ss_pred chHHHHHHHHHHHHHcCCccCCCcccCCCCcccc-----ccHHH-HHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHH
Confidence 4568899999999995456689999999984321 00011 25555666666666778889999999999999999
Q ss_pred HHhhCccc----ccceEEeecC
Q 024033 112 ASVKKPEL----FKRLILIGTS 129 (273)
Q Consensus 112 ~a~~~p~~----v~~lvl~~~~ 129 (273)
++..+|+. |+++|.++++
T Consensus 179 fl~~~p~~~~k~I~~~I~la~P 200 (440)
T PLN02733 179 FMSLHSDVFEKYVNSWIAIAAP 200 (440)
T ss_pred HHHHCCHhHHhHhccEEEECCC
Confidence 99988874 6888899764
No 112
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.05 E-value=3.3e-08 Score=89.00 Aligned_cols=113 Identities=14% Similarity=0.112 Sum_probs=75.3
Q ss_pred cccceEEec-----CCCceEEEecCCCCChhchhhh---hh---------------hhhcCceEEEEecC-CCccccCCC
Q 024033 10 AAMNAKIIG-----SGKETLVLAHGFGGDQSIWDKI---TP---------------VLSQHYRVLAFDWL-FSGAILNKD 65 (273)
Q Consensus 10 ~~~~~~~~G-----~~~~~vvllHG~~~~~~~w~~~---~~---------------~L~~~~~via~D~~-G~G~S~~~~ 65 (273)
..++|..+. ...|.||+++|-+++++.+-.+ .| .+.+..+++.+|.| |+|.|....
T Consensus 61 ~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDqP~G~G~S~~~~ 140 (462)
T PTZ00472 61 KHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQPAGVGFSYADK 140 (462)
T ss_pred ceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccCeEEEeCCCCcCcccCCC
Confidence 345565553 2357899999998888766221 11 13445789999975 999883211
Q ss_pred CCCCCCCcccccHHHHHHHHHHHHHH-------cCCCceEEEEEChhHHHHHHHHhhC----------cccccceEEeec
Q 024033 66 HQSLYNPVKYSSYEAFADDLITLLEE-------NDLKSTLFIGHSMSGMIGCIASVKK----------PELFKRLILIGT 128 (273)
Q Consensus 66 ~~~~~~~~~~~s~~~~a~~l~~~~~~-------~~~~~~~lvGhS~GG~ia~~~a~~~----------p~~v~~lvl~~~ 128 (273)
. .+ ..+.++.++|+.++++. +...+++|+|||+||..+-.+|.+- +-.++++++.++
T Consensus 141 -~-~~----~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg 214 (462)
T PTZ00472 141 -A-DY----DHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNG 214 (462)
T ss_pred -C-CC----CCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEecc
Confidence 0 01 13467888888888874 3457899999999999987776541 124678888776
No 113
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.01 E-value=2.3e-08 Score=84.87 Aligned_cols=237 Identities=18% Similarity=0.198 Sum_probs=129.6
Q ss_pred CCceEEEecCCCCChhchhhh---hhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHH----------HHHHH
Q 024033 20 GKETLVLAHGFGGDQSIWDKI---TPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAF----------ADDLI 86 (273)
Q Consensus 20 ~~~~vvllHG~~~~~~~w~~~---~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~----------a~~l~ 86 (273)
.+|..|.++|-|++....+.. .+.|+++...+.+..|-||.- +|..+.. ..+.+..++ +..|.
T Consensus 91 ~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~R-kP~~Q~~---s~l~~VsDl~~~g~~~i~E~~~Ll 166 (348)
T PF09752_consen 91 YRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQR-KPKDQRR---SSLRNVSDLFVMGRATILESRALL 166 (348)
T ss_pred CCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEeccccccc-ChhHhhc---ccccchhHHHHHHhHHHHHHHHHH
Confidence 356788999988855544433 255666999999999999986 5542211 112222222 22344
Q ss_pred HHHHHcCCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCCC-ccCCCCCCCCCC-hhhHHHHHHHHH-HhHHHHhc
Q 024033 87 TLLEENDLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPR-YINTDDYEGGFE-PSDIENLISNVE-TNYASWAS 163 (273)
Q Consensus 87 ~~~~~~~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~ 163 (273)
..+++.|..++-+.|-||||..|...|...|..+..+-.++.+.. ....++ -+. .-+++.+..... ..+..-..
T Consensus 167 ~Wl~~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~G---vls~~i~W~~L~~q~~~~~~~~~~~ 243 (348)
T PF09752_consen 167 HWLEREGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEG---VLSNSINWDALEKQFEDTVYEEEIS 243 (348)
T ss_pred HHHHhcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhh---hhhcCCCHHHHHHHhcccchhhhhc
Confidence 555666889999999999999999999999998776666654321 000111 000 011222111100 01111000
Q ss_pred cccccccCCCChhhHHHHHHHHHhcChhhHHHHHHHh--cccccccccCCC-CCCEEEEecCCCCccchhHHHHHHHHcC
Q 024033 164 SFPRLVVDTKDAPSVEKFENCLKRMRHEFALPLAKTV--FYSDEREILDKV-ETPCTIFQPSNDAVVPNSVAYYMQEKMK 240 (273)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~i-~~P~lii~G~~D~~~~~~~~~~~~~~~~ 240 (273)
... ...... ......-...+.+. ......+ ...++...-..+ .-.+++|.+++|..+|......|.+..|
T Consensus 244 ~~~-----~~~~~~-~~~~~~~~~~~~Ea-~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~WP 316 (348)
T PF09752_consen 244 DIP-----AQNKSL-PLDSMEERRRDREA-LRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQEIWP 316 (348)
T ss_pred ccc-----cCcccc-cchhhccccchHHH-HHHHHHHHHhhccccccCCCCCCCcEEEEEecCceEechhhcchHHHhCC
Confidence 000 000000 00000000000111 1111111 112222222111 2346889999999999988889999999
Q ss_pred CCeEEEEcCCCCCC-CCccChHHHHHHHHHhhc
Q 024033 241 GKSTVEIIEADGHF-PQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 241 ~~~~~~~i~~~gH~-~~~e~p~~~~~~i~~fl~ 272 (273)
+ +++.++++ ||. ..+-+.+.|.++|.+-++
T Consensus 317 G-sEvR~l~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 317 G-SEVRYLPG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred C-CeEEEecC-CcEEEeeechHHHHHHHHHHhh
Confidence 7 59999985 994 477788999999987653
No 114
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.01 E-value=1.6e-08 Score=78.06 Aligned_cols=168 Identities=21% Similarity=0.297 Sum_probs=106.4
Q ss_pred ceEEEecCCCC-----Chhchhhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCCC
Q 024033 22 ETLVLAHGFGG-----DQSIWDKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDLK 95 (273)
Q Consensus 22 ~~vvllHG~~~-----~~~~w~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~~ 95 (273)
|..|.+|-.+- +...-..+...|.+ +|.++.+|+||-|.|+. . ++..--. .++ +...++++....-+
T Consensus 29 ~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G-~----fD~GiGE-~~D-a~aaldW~~~~hp~ 101 (210)
T COG2945 29 PIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQG-E----FDNGIGE-LED-AAAALDWLQARHPD 101 (210)
T ss_pred ceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccC-c----ccCCcch-HHH-HHHHHHHHHhhCCC
Confidence 44566665432 23333445555666 89999999999999943 2 2211111 332 33344555544322
Q ss_pred --ceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHHhccccccccCCC
Q 024033 96 --STLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASWASSFPRLVVDTK 173 (273)
Q Consensus 96 --~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (273)
.+.|.|.|+||.|++++|.+.|+- .+.++..|.. +
T Consensus 102 s~~~~l~GfSFGa~Ia~~la~r~~e~---~~~is~~p~~-~--------------------------------------- 138 (210)
T COG2945 102 SASCWLAGFSFGAYIAMQLAMRRPEI---LVFISILPPI-N--------------------------------------- 138 (210)
T ss_pred chhhhhcccchHHHHHHHHHHhcccc---cceeeccCCC-C---------------------------------------
Confidence 246899999999999999998863 2222221110 0
Q ss_pred ChhhHHHHHHHHHhcChhhHHHHHHHhcccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCCCeEEEEcCCCCC
Q 024033 174 DAPSVEKFENCLKRMRHEFALPLAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKGKSTVEIIEADGH 253 (273)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH 253 (273)
.+ . ...+....+|.++|+|+.|.+++....-.+++-.+ .+++++++++|
T Consensus 139 ------~~--d---------------------fs~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~~~--~~~i~i~~a~H 187 (210)
T COG2945 139 ------AY--D---------------------FSFLAPCPSPGLVIQGDADDVVDLVAVLKWQESIK--ITVITIPGADH 187 (210)
T ss_pred ------ch--h---------------------hhhccCCCCCceeEecChhhhhcHHHHHHhhcCCC--CceEEecCCCc
Confidence 00 0 00123335799999999999998877666666544 36788999999
Q ss_pred CCCccChHHHHHHHHHhh
Q 024033 254 FPQLTAHLQLIDVLNKVL 271 (273)
Q Consensus 254 ~~~~e~p~~~~~~i~~fl 271 (273)
|.+- +-+.+.+.|.+|+
T Consensus 188 FF~g-Kl~~l~~~i~~~l 204 (210)
T COG2945 188 FFHG-KLIELRDTIADFL 204 (210)
T ss_pred eecc-cHHHHHHHHHHHh
Confidence 9876 5567888888887
No 115
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.98 E-value=4.1e-08 Score=93.35 Aligned_cols=216 Identities=13% Similarity=0.063 Sum_probs=108.5
Q ss_pred hhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHc-----C------------CCceEEEEEC
Q 024033 42 PVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEEN-----D------------LKSTLFIGHS 103 (273)
Q Consensus 42 ~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~-----~------------~~~~~lvGhS 103 (273)
+++.. +|.|+..|.||.|.|+. . +...... -.+-..++++++... + ..++.++|.|
T Consensus 273 ~~~~~rGYaVV~~D~RGtg~SeG-~----~~~~~~~-E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~S 346 (767)
T PRK05371 273 DYFLPRGFAVVYVSGIGTRGSDG-C----PTTGDYQ-EIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKS 346 (767)
T ss_pred HHHHhCCeEEEEEcCCCCCCCCC-c----CccCCHH-HHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEc
Confidence 45555 89999999999999943 2 1111011 111233344555421 0 3589999999
Q ss_pred hhHHHHHHHHhhCcccccceEEeecCCCccCC--C----CCCCCCChhhHHHHHHHHHHhHHHHhccccccccCCCChhh
Q 024033 104 MSGMIGCIASVKKPELFKRLILIGTSPRYINT--D----DYEGGFEPSDIENLISNVETNYASWASSFPRLVVDTKDAPS 177 (273)
Q Consensus 104 ~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (273)
+||.+++.+|...|..++++|..++...+... . .+..++...+.+.+...... .. ....... .....
T Consensus 347 Y~G~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~---r~---~~~~~~~-~~~~~ 419 (767)
T PRK05371 347 YLGTLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYS---RN---LLAGDYL-RHNEA 419 (767)
T ss_pred HHHHHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhh---cc---cCcchhh-cchHH
Confidence 99999999999999999999987664321100 0 00011111111100000000 00 0000000 00011
Q ss_pred HHHHHHHHHh-cChhhHHHHHHHhcccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcC---CCeEEEEcCCCCC
Q 024033 178 VEKFENCLKR-MRHEFALPLAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMK---GKSTVEIIEADGH 253 (273)
Q Consensus 178 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~---~~~~~~~i~~~gH 253 (273)
.+.+.+.+.. ..... ......+-..+....+.+|++|+++|+|..|..+++.....+.+.+. ..+++.+ ...+|
T Consensus 420 ~~~~~~~~~~~~~~~~-~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l-~~g~H 497 (767)
T PRK05371 420 CEKLLAELTAAQDRKT-GDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFL-HQGGH 497 (767)
T ss_pred HHHHHhhhhhhhhhcC-CCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEE-eCCCc
Confidence 1111110000 00000 00000111223445678999999999999999998776655555442 1245644 44689
Q ss_pred CCC-ccChHHHHHHHHHhhc
Q 024033 254 FPQ-LTAHLQLIDVLNKVLG 272 (273)
Q Consensus 254 ~~~-~e~p~~~~~~i~~fl~ 272 (273)
..+ ...+..+.+.+.+|++
T Consensus 498 ~~~~~~~~~d~~e~~~~Wfd 517 (767)
T PRK05371 498 VYPNNWQSIDFRDTMNAWFT 517 (767)
T ss_pred cCCCchhHHHHHHHHHHHHH
Confidence 543 3345566676777763
No 116
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.93 E-value=3.4e-08 Score=83.19 Aligned_cols=104 Identities=15% Similarity=0.212 Sum_probs=66.1
Q ss_pred CceEEEecCCCCCh-hchhhh--hh--------hhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHH
Q 024033 21 KETLVLAHGFGGDQ-SIWDKI--TP--------VLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLL 89 (273)
Q Consensus 21 ~~~vvllHG~~~~~-~~w~~~--~~--------~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~ 89 (273)
.|+||..|+.+.+. ..+... .+ ..+.+|-|+..|.||.|.|+. . +... ..+-..-..|+++.+
T Consensus 20 ~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G-~----~~~~-~~~e~~D~~d~I~W~ 93 (272)
T PF02129_consen 20 FPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEG-E----FDPM-SPNEAQDGYDTIEWI 93 (272)
T ss_dssp EEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S------B-TT-SHHHHHHHHHHHHHH
T ss_pred ccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCC-c----cccC-ChhHHHHHHHHHHHH
Confidence 36788889988643 222221 11 445589999999999999943 2 1110 111223344555556
Q ss_pred HHcCC--CceEEEEEChhHHHHHHHHhhCcccccceEEeecCC
Q 024033 90 EENDL--KSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSP 130 (273)
Q Consensus 90 ~~~~~--~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (273)
.+... .++-++|.|++|..++.+|...|..+++++...+..
T Consensus 94 ~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~ 136 (272)
T PF02129_consen 94 AAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWS 136 (272)
T ss_dssp HHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-S
T ss_pred HhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCC
Confidence 55443 379999999999999999998888999999876643
No 117
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.91 E-value=2.3e-09 Score=86.41 Aligned_cols=86 Identities=24% Similarity=0.329 Sum_probs=51.1
Q ss_pred ceEEEecCCCC-Chhchhhhhhhhhc-Cce---EEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHH----Hc
Q 024033 22 ETLVLAHGFGG-DQSIWDKITPVLSQ-HYR---VLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLE----EN 92 (273)
Q Consensus 22 ~~vvllHG~~~-~~~~w~~~~~~L~~-~~~---via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~----~~ 92 (273)
.||||+||.++ ....|..+.++|.+ +|. |+++++-....+.... ......+.+.+|.++++ .-
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~--------~~~~~~~~~~~l~~fI~~Vl~~T 73 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQ--------NAHMSCESAKQLRAFIDAVLAYT 73 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHH--------HHHB-HHHHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCccc--------ccccchhhHHHHHHHHHHHHHhh
Confidence 47999999998 67999999999988 787 8999984433321100 00001233344554444 45
Q ss_pred CCCceEEEEEChhHHHHHHHHhhC
Q 024033 93 DLKSTLFIGHSMSGMIGCIASVKK 116 (273)
Q Consensus 93 ~~~~~~lvGhS~GG~ia~~~a~~~ 116 (273)
|- ++.||||||||+++-++....
T Consensus 74 Ga-kVDIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 74 GA-KVDIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp T---EEEEEETCHHHHHHHHHHHC
T ss_pred CC-EEEEEEcCCcCHHHHHHHHHc
Confidence 77 999999999999998887644
No 118
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.91 E-value=5e-09 Score=85.88 Aligned_cols=102 Identities=23% Similarity=0.245 Sum_probs=73.4
Q ss_pred CceEEEecCCCCChhchhhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHH-H------c
Q 024033 21 KETLVLAHGFGGDQSIWDKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLE-E------N 92 (273)
Q Consensus 21 ~~~vvllHG~~~~~~~w~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~-~------~ 92 (273)
-|.|||+||++.....|..+...++. +|-|+++|+...+..+.. .+..+..+.++.+.+=++ . .
T Consensus 17 yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~--------~~~~~~~~vi~Wl~~~L~~~l~~~v~~ 88 (259)
T PF12740_consen 17 YPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDDT--------DEVASAAEVIDWLAKGLESKLPLGVKP 88 (259)
T ss_pred cCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCcc--------hhHHHHHHHHHHHHhcchhhccccccc
Confidence 37899999999888888999999999 799999996554332100 111223333333333121 2 2
Q ss_pred CCCceEEEEEChhHHHHHHHHhhC-----cccccceEEeecCC
Q 024033 93 DLKSTLFIGHSMSGMIGCIASVKK-----PELFKRLILIGTSP 130 (273)
Q Consensus 93 ~~~~~~lvGhS~GG~ia~~~a~~~-----p~~v~~lvl~~~~~ 130 (273)
+.+++.|.|||-||-+|..++..+ +.++++++++++..
T Consensus 89 D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 89 DFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred cccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 567899999999999999999987 66899999998753
No 119
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.90 E-value=3.7e-08 Score=75.09 Aligned_cols=154 Identities=13% Similarity=0.198 Sum_probs=101.6
Q ss_pred ceEEEecCCCCC-hhchhhh-hhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCCCceEE
Q 024033 22 ETLVLAHGFGGD-QSIWDKI-TPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDLKSTLF 99 (273)
Q Consensus 22 ~~vvllHG~~~~-~~~w~~~-~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~~~~~l 99 (273)
+.+|.+||..++ ...|... ...|.. .+.+-. +.+.....+++++.+.+.+... -++++|
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~~-a~rveq-----------------~~w~~P~~~dWi~~l~~~v~a~-~~~~vl 63 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALPN-ARRVEQ-----------------DDWEAPVLDDWIARLEKEVNAA-EGPVVL 63 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCcc-chhccc-----------------CCCCCCCHHHHHHHHHHHHhcc-CCCeEE
Confidence 458999998665 5788653 333333 111111 0111234899999999888776 355999
Q ss_pred EEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHHhccccccccCCCChhhHH
Q 024033 100 IGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASWASSFPRLVVDTKDAPSVE 179 (273)
Q Consensus 100 vGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (273)
|+||+|+.++..++......|++++++++.-.- .... + .
T Consensus 64 VAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~-----------~~~~-------------~----~------------- 102 (181)
T COG3545 64 VAHSLGCATVAHWAEHIQRQVAGALLVAPPDVS-----------RPEI-------------R----P------------- 102 (181)
T ss_pred EEecccHHHHHHHHHhhhhccceEEEecCCCcc-----------cccc-------------c----h-------------
Confidence 999999999999998777799999999753110 0000 0 0
Q ss_pred HHHHHHHhcChhhHHHHHHHhcccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCCCeEEEEcCCCCCCCC
Q 024033 180 KFENCLKRMRHEFALPLAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKGKSTVEIIEADGHFPQ 256 (273)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~ 256 (273)
+.+..+.+. -..+.--|.++|..++|+.++++.++.+++...+ .++.+..+||+--
T Consensus 103 ---~~~~tf~~~----------------p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~wgs--~lv~~g~~GHiN~ 158 (181)
T COG3545 103 ---KHLMTFDPI----------------PREPLPFPSVVVASRNDPYVSYEHAEDLANAWGS--ALVDVGEGGHINA 158 (181)
T ss_pred ---hhccccCCC----------------ccccCCCceeEEEecCCCCCCHHHHHHHHHhccH--hheecccccccch
Confidence 000011100 0122245899999999999999999999999973 6888888999753
No 120
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.82 E-value=7.6e-08 Score=77.70 Aligned_cols=95 Identities=21% Similarity=0.324 Sum_probs=58.9
Q ss_pred EEEecCCC---CChhchhhhhhhhh--cCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHH-----cC
Q 024033 24 LVLAHGFG---GDQSIWDKITPVLS--QHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEE-----ND 93 (273)
Q Consensus 24 vvllHG~~---~~~~~w~~~~~~L~--~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~-----~~ 93 (273)
||++||-+ ++..........|. .++.|+.+|+|=. |.. .+. ..+++..+.+.-++++ .+
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~-----p~~--~~p----~~~~D~~~a~~~l~~~~~~~~~d 69 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLA-----PEA--PFP----AALEDVKAAYRWLLKNADKLGID 69 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---T-----TTS--STT----HHHHHHHHHHHHHHHTHHHHTEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccc-----ccc--ccc----ccccccccceeeecccccccccc
Confidence 78999943 23333344445454 3899999999853 220 010 1255555555555665 45
Q ss_pred CCceEEEEEChhHHHHHHHHhhCccc----ccceEEeecC
Q 024033 94 LKSTLFIGHSMSGMIGCIASVKKPEL----FKRLILIGTS 129 (273)
Q Consensus 94 ~~~~~lvGhS~GG~ia~~~a~~~p~~----v~~lvl~~~~ 129 (273)
.++++|+|+|-||.+++.++....+. +++++++++.
T Consensus 70 ~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~ 109 (211)
T PF07859_consen 70 PERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPW 109 (211)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCH
T ss_pred ccceEEeecccccchhhhhhhhhhhhcccchhhhhccccc
Confidence 56899999999999999999765543 8899988763
No 121
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.80 E-value=1.5e-08 Score=87.17 Aligned_cols=104 Identities=19% Similarity=0.376 Sum_probs=63.4
Q ss_pred CCCceEEEecCCCCCh--hch-hhhhhh-hhc---CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHH
Q 024033 19 SGKETLVLAHGFGGDQ--SIW-DKITPV-LSQ---HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEE 91 (273)
Q Consensus 19 ~~~~~vvllHG~~~~~--~~w-~~~~~~-L~~---~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~ 91 (273)
..+|+++++|||.++. ..| ..+... |.. ++.||++||..- + ... +.. ...+....++.+..++..
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~--a-~~~----Y~~-a~~n~~~vg~~la~~l~~ 140 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRG--A-SNN----YPQ-AVANTRLVGRQLAKFLSF 140 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHH--H-SS-----HHH-HHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhh--c-ccc----ccc-hhhhHHHHHHHHHHHHHH
Confidence 4578999999998887 567 455554 443 699999999432 1 111 100 011233444444444433
Q ss_pred ------cCCCceEEEEEChhHHHHHHHHhhCcc--cccceEEeecCC
Q 024033 92 ------NDLKSTLFIGHSMSGMIGCIASVKKPE--LFKRLILIGTSP 130 (273)
Q Consensus 92 ------~~~~~~~lvGhS~GG~ia~~~a~~~p~--~v~~lvl~~~~~ 130 (273)
+..++++|||||+||-||-.++..... ++.+++.+|++.
T Consensus 141 L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAg 187 (331)
T PF00151_consen 141 LINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAG 187 (331)
T ss_dssp HHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-
T ss_pred HHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccc
Confidence 245789999999999999999988777 999999999864
No 122
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.80 E-value=5.6e-07 Score=78.85 Aligned_cols=128 Identities=19% Similarity=0.257 Sum_probs=86.4
Q ss_pred cccccccccccceEEec-CCCceEEEecCCCCChhchhhhhhh------hhc-CceEEEEecCCCccccCCCCCC---CC
Q 024033 2 VIREQGLSAAMNAKIIG-SGKETLVLAHGFGGDQSIWDKITPV------LSQ-HYRVLAFDWLFSGAILNKDHQS---LY 70 (273)
Q Consensus 2 ~~~~~~~~~~~~~~~~G-~~~~~vvllHG~~~~~~~w~~~~~~------L~~-~~~via~D~~G~G~S~~~~~~~---~~ 70 (273)
|.|+|+..-.+|=--.+ ..+|+|+|.||+.+++..|-...+. |.+ +|+|=.-..||--+|.+-...+ ..
T Consensus 53 V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~ 132 (403)
T KOG2624|consen 53 VTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSSDK 132 (403)
T ss_pred EEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccCCcCCc
Confidence 45667665544433333 4568999999999999999655432 566 8999999999988885421000 01
Q ss_pred CCcccccHHHHHH-HHHHHHH----HcCCCceEEEEEChhHHHHHHHHhhCcc---cccceEEeecCC
Q 024033 71 NPVKYSSYEAFAD-DLITLLE----ENDLKSTLFIGHSMSGMIGCIASVKKPE---LFKRLILIGTSP 130 (273)
Q Consensus 71 ~~~~~~s~~~~a~-~l~~~~~----~~~~~~~~lvGhS~GG~ia~~~a~~~p~---~v~~lvl~~~~~ 130 (273)
.-++++ +.+++. ||-+.++ .-+-++.+.||||-|+.+...++..+|+ +|+..++++++.
T Consensus 133 ~FW~FS-~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 133 EFWDFS-WHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred ceeecc-hhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 112233 555443 3444443 3466789999999999999988888876 788888887643
No 123
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.79 E-value=1.3e-08 Score=82.65 Aligned_cols=83 Identities=19% Similarity=0.294 Sum_probs=50.0
Q ss_pred ceEEEecCCCCChhchhhhhhhhhc---CceEEEEecCCCccccCCCCCCCCCCcccccHHHH----HHHHHHHHHHcCC
Q 024033 22 ETLVLAHGFGGDQSIWDKITPVLSQ---HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAF----ADDLITLLEENDL 94 (273)
Q Consensus 22 ~~vvllHG~~~~~~~w~~~~~~L~~---~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~----a~~l~~~~~~~~~ 94 (273)
..|||+||+.++...|..+...|.. .+.-..+...++-..... .+..++.. +++|.+.++....
T Consensus 5 hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~---------T~~gI~~~g~rL~~eI~~~~~~~~~ 75 (217)
T PF05057_consen 5 HLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFK---------TFDGIDVCGERLAEEILEHIKDYES 75 (217)
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccccc---------cchhhHHHHHHHHHHHHHhcccccc
Confidence 4699999999999999888777766 332112222222111000 11224544 4444455444443
Q ss_pred --CceEEEEEChhHHHHHHHH
Q 024033 95 --KSTLFIGHSMSGMIGCIAS 113 (273)
Q Consensus 95 --~~~~lvGhS~GG~ia~~~a 113 (273)
.++++|||||||.|+-.+.
T Consensus 76 ~~~~IsfIgHSLGGli~r~al 96 (217)
T PF05057_consen 76 KIRKISFIGHSLGGLIARYAL 96 (217)
T ss_pred ccccceEEEecccHHHHHHHH
Confidence 3799999999999985444
No 124
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.78 E-value=1.3e-08 Score=82.37 Aligned_cols=50 Identities=18% Similarity=0.283 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHc---CCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCCC
Q 024033 81 FADDLITLLEEN---DLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPR 131 (273)
Q Consensus 81 ~a~~l~~~~~~~---~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~ 131 (273)
+.+...+++.+. +-+++.|+|.|.||-+|+.+|.++| .|+++|.++++..
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~ 57 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSV 57 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCcee
Confidence 455666777665 2358999999999999999999999 7999999987653
No 125
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.78 E-value=5.7e-07 Score=67.49 Aligned_cols=169 Identities=18% Similarity=0.218 Sum_probs=106.9
Q ss_pred cCCCceEEEecCCCCC--hhchhhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCC
Q 024033 18 GSGKETLVLAHGFGGD--QSIWDKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDL 94 (273)
Q Consensus 18 G~~~~~vvllHG~~~~--~~~w~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~ 94 (273)
|+..-+|||-||.+.+ +..-..+...|.. ++.|..++++---.. +.......+..-+--.++...+.++...+.-
T Consensus 11 g~~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~R--rtg~rkPp~~~~t~~~~~~~~~aql~~~l~~ 88 (213)
T COG3571 11 GPAPVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAAR--RTGRRKPPPGSGTLNPEYIVAIAQLRAGLAE 88 (213)
T ss_pred CCCCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhc--cccCCCCcCccccCCHHHHHHHHHHHhcccC
Confidence 3333479999998764 4555677777877 899999988543221 1000000011112255677778888887777
Q ss_pred CceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHHhccccccccCCCC
Q 024033 95 KSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASWASSFPRLVVDTKD 174 (273)
Q Consensus 95 ~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (273)
.+.++-||||||-++..++..-...|.+|+.++=+ +.+ +..
T Consensus 89 gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYP--fhp-------------------------------------pGK 129 (213)
T COG3571 89 GPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYP--FHP-------------------------------------PGK 129 (213)
T ss_pred CceeeccccccchHHHHHHHhhcCCcceEEEecCc--cCC-------------------------------------CCC
Confidence 78999999999999988877655558888876421 000 000
Q ss_pred hhhHHHHHHHHHhcChhhHHHHHHHhcccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCCCeEEEEcCCCCCC
Q 024033 175 APSVEKFENCLKRMRHEFALPLAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKGKSTVEIIEADGHF 254 (273)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~ 254 (273)
|+ +. ..+.|..+++|++|.+|+.|+.-.......+. +....++++++++.|-
T Consensus 130 Pe-------~~-------------------Rt~HL~gl~tPtli~qGtrD~fGtr~~Va~y~--ls~~iev~wl~~adHD 181 (213)
T COG3571 130 PE-------QL-------------------RTEHLTGLKTPTLITQGTRDEFGTRDEVAGYA--LSDPIEVVWLEDADHD 181 (213)
T ss_pred cc-------cc-------------------hhhhccCCCCCeEEeecccccccCHHHHHhhh--cCCceEEEEeccCccc
Confidence 00 00 11357788999999999999875544332221 2323699999999996
Q ss_pred C
Q 024033 255 P 255 (273)
Q Consensus 255 ~ 255 (273)
.
T Consensus 182 L 182 (213)
T COG3571 182 L 182 (213)
T ss_pred c
Confidence 5
No 126
>PRK04940 hypothetical protein; Provisional
Probab=98.77 E-value=1.4e-06 Score=67.72 Aligned_cols=83 Identities=11% Similarity=0.155 Sum_probs=49.7
Q ss_pred EEEecCCCCChhc--hh-hhhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHc---C-CCc
Q 024033 24 LVLAHGFGGDQSI--WD-KITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEEN---D-LKS 96 (273)
Q Consensus 24 vvllHG~~~~~~~--w~-~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~---~-~~~ 96 (273)
|+.+|||.+++.+ .. .+...+..+.+++ +++. +. ...-.+.+.+.++.+ + .++
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~~~~p~~~~~--~l~~------~~------------P~~a~~~l~~~i~~~~~~~~~~~ 61 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQFIDPDVRLI--SYST------LH------------PKHDMQHLLKEVDKMLQLSDDER 61 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhheeeCCCCeEE--ECCC------CC------------HHHHHHHHHHHHHHhhhccCCCC
Confidence 7899999998877 52 1222443344554 3321 00 111122333333321 1 257
Q ss_pred eEEEEEChhHHHHHHHHhhCcccccceEEeecC
Q 024033 97 TLFIGHSMSGMIGCIASVKKPELFKRLILIGTS 129 (273)
Q Consensus 97 ~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~ 129 (273)
+.|||.||||+-|..+|.++. + +.|+++++
T Consensus 62 ~~liGSSLGGyyA~~La~~~g--~-~aVLiNPA 91 (180)
T PRK04940 62 PLICGVGLGGYWAERIGFLCG--I-RQVIFNPN 91 (180)
T ss_pred cEEEEeChHHHHHHHHHHHHC--C-CEEEECCC
Confidence 999999999999999999986 3 45667654
No 127
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.74 E-value=2e-06 Score=69.12 Aligned_cols=204 Identities=15% Similarity=0.191 Sum_probs=101.8
Q ss_pred CceEEEecCCCCChhchhhhhhhhhc-CceEEEEecCCC-ccccCCCCCCCCCCcccccHHHHHHHHHHH---HHHcCCC
Q 024033 21 KETLVLAHGFGGDQSIWDKITPVLSQ-HYRVLAFDWLFS-GAILNKDHQSLYNPVKYSSYEAFADDLITL---LEENDLK 95 (273)
Q Consensus 21 ~~~vvllHG~~~~~~~w~~~~~~L~~-~~~via~D~~G~-G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~---~~~~~~~ 95 (273)
.++||+-.||+..-..|..+..+|+. +|+|+.+|..-| |.|+ .+ ..+|+ +....+++..+ ++..|..
T Consensus 30 ~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSs-G~------I~eft-ms~g~~sL~~V~dwl~~~g~~ 101 (294)
T PF02273_consen 30 NNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSS-GD------INEFT-MSIGKASLLTVIDWLATRGIR 101 (294)
T ss_dssp S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B---------------------HHHHHHHHHHHHHHHHHTT--
T ss_pred CCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCC-CC------hhhcc-hHHhHHHHHHHHHHHHhcCCC
Confidence 46899999999999999999999998 899999998866 5563 22 23454 77777776654 4556889
Q ss_pred ceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHH-HHhH-HHHhcccccc--ccC
Q 024033 96 STLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNV-ETNY-ASWASSFPRL--VVD 171 (273)
Q Consensus 96 ~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~--~~~ 171 (273)
++-|+.-|+.|-||+..|.+ + .++-||..-+ .. +++..+... ..++ ..+....+.. +.+
T Consensus 102 ~~GLIAaSLSaRIAy~Va~~-i-~lsfLitaVG---VV------------nlr~TLe~al~~Dyl~~~i~~lp~dldfeG 164 (294)
T PF02273_consen 102 RIGLIAASLSARIAYEVAAD-I-NLSFLITAVG---VV------------NLRDTLEKALGYDYLQLPIEQLPEDLDFEG 164 (294)
T ss_dssp -EEEEEETTHHHHHHHHTTT-S---SEEEEES-----S-------------HHHHHHHHHSS-GGGS-GGG--SEEEETT
T ss_pred cchhhhhhhhHHHHHHHhhc-c-CcceEEEEee---ee------------eHHHHHHHHhccchhhcchhhCCCcccccc
Confidence 99999999999999999985 3 3555554321 10 122222111 1111 0111111000 000
Q ss_pred CCChhhHHHHHHHHHhcChhhHHHHHHHhcccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCC-CeEEEEcCC
Q 024033 172 TKDAPSVEKFENCLKRMRHEFALPLAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKG-KSTVEIIEA 250 (273)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~ 250 (273)
-+ -..+.|.+......-... ..-....+.+++|++.+++++|.++.+.....+...+.+ ..++..++|
T Consensus 165 h~--l~~~vFv~dc~e~~w~~l---------~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~G 233 (294)
T PF02273_consen 165 HN--LGAEVFVTDCFEHGWDDL---------DSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPG 233 (294)
T ss_dssp EE--EEHHHHHHHHHHTT-SSH---------HHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT
T ss_pred cc--cchHHHHHHHHHcCCccc---------hhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecC
Confidence 00 012223333222221110 012234677899999999999999988777777665543 368899999
Q ss_pred CCCCCCccChH
Q 024033 251 DGHFPQLTAHL 261 (273)
Q Consensus 251 ~gH~~~~e~p~ 261 (273)
++|-.- |+|-
T Consensus 234 s~HdL~-enl~ 243 (294)
T PF02273_consen 234 SSHDLG-ENLV 243 (294)
T ss_dssp -SS-TT-SSHH
T ss_pred ccchhh-hChH
Confidence 999864 3554
No 128
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.73 E-value=2.7e-08 Score=80.42 Aligned_cols=101 Identities=19% Similarity=0.205 Sum_probs=73.7
Q ss_pred ceEEEecCCCCChhchhhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHc-------C
Q 024033 22 ETLVLAHGFGGDQSIWDKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEEN-------D 93 (273)
Q Consensus 22 ~~vvllHG~~~~~~~w~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~-------~ 93 (273)
|.|+|+|||.-..+.|..+...++. +|-|+||++-.- . .|+ ...+..+....++.+.+-++++ +
T Consensus 47 PVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~--~-~p~-----~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~n 118 (307)
T PF07224_consen 47 PVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTL--F-PPD-----GQDEIKSAASVINWLPEGLQHVLPENVEAN 118 (307)
T ss_pred cEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcc--c-CCC-----chHHHHHHHHHHHHHHhhhhhhCCCCcccc
Confidence 6899999999999999999999999 799999998642 1 122 0111223444444444444432 4
Q ss_pred CCceEEEEEChhHHHHHHHHhhCc--ccccceEEeecCC
Q 024033 94 LKSTLFIGHSMSGMIGCIASVKKP--ELFKRLILIGTSP 130 (273)
Q Consensus 94 ~~~~~lvGhS~GG~ia~~~a~~~p--~~v~~lvl~~~~~ 130 (273)
+++..|+|||.||-.|..+|+.+. -++++||.+|+..
T Consensus 119 l~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~ 157 (307)
T PF07224_consen 119 LSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVA 157 (307)
T ss_pred cceEEEeecCCccHHHHHHHhcccccCchhheecccccC
Confidence 678999999999999999998764 3688999998743
No 129
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.71 E-value=2.4e-07 Score=74.95 Aligned_cols=110 Identities=15% Similarity=0.121 Sum_probs=68.4
Q ss_pred CceEEEecCCCCChhchhhh--hhhhhc--CceEEEEecCCCccccCC-CCCCCCCCcccccHHHHHHHHHHHHHHcCC-
Q 024033 21 KETLVLAHGFGGDQSIWDKI--TPVLSQ--HYRVLAFDWLFSGAILNK-DHQSLYNPVKYSSYEAFADDLITLLEENDL- 94 (273)
Q Consensus 21 ~~~vvllHG~~~~~~~w~~~--~~~L~~--~~~via~D~~G~G~S~~~-~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~- 94 (273)
.|.||++||.+.++..+... ...|++ +|-|+.|+.........- ......+.........+++-+..+.++.++
T Consensus 16 ~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~iD 95 (220)
T PF10503_consen 16 VPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNID 95 (220)
T ss_pred CCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcccC
Confidence 46799999999999887542 345666 477777875422111000 000000000011122233333444455544
Q ss_pred -CceEEEEEChhHHHHHHHHhhCcccccceEEeecCC
Q 024033 95 -KSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSP 130 (273)
Q Consensus 95 -~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (273)
+++.+.|+|.||+.+..++..+|++|.++.+++..+
T Consensus 96 ~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 96 PSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVP 132 (220)
T ss_pred CCceeeEEECHHHHHHHHHHHhCCccceEEEeecccc
Confidence 579999999999999999999999999998887654
No 130
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.64 E-value=5.6e-06 Score=66.64 Aligned_cols=247 Identities=13% Similarity=0.125 Sum_probs=134.7
Q ss_pred cCCCceEEEecCCCCChhchhhhhhhhhc----CceEEEEecCCCccccC--CCCCCCCCCcccccHHHHHHHHHHHHHH
Q 024033 18 GSGKETLVLAHGFGGDQSIWDKITPVLSQ----HYRVLAFDWLFSGAILN--KDHQSLYNPVKYSSYEAFADDLITLLEE 91 (273)
Q Consensus 18 G~~~~~vvllHG~~~~~~~w~~~~~~L~~----~~~via~D~~G~G~S~~--~~~~~~~~~~~~~s~~~~a~~l~~~~~~ 91 (273)
|..++.|++++|.++....|.++...|.. +.++..+-..||-.-.. ....+..+...| |+++.++.=.+++++
T Consensus 26 ~~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eif-sL~~QV~HKlaFik~ 104 (301)
T KOG3975|consen 26 GEDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIF-SLQDQVDHKLAFIKE 104 (301)
T ss_pred CCCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCccccccccccccccc-chhhHHHHHHHHHHH
Confidence 44567899999999999999888777644 35688888888765310 000001122334 499999999999998
Q ss_pred cC--CCceEEEEEChhHHHHHHHHhhC--cccccceEEeecCC-CccC-CCCCC--CCCC-hhhHHHH-----HHHHHHh
Q 024033 92 ND--LKSTLFIGHSMSGMIGCIASVKK--PELFKRLILIGTSP-RYIN-TDDYE--GGFE-PSDIENL-----ISNVETN 157 (273)
Q Consensus 92 ~~--~~~~~lvGhS~GG~ia~~~a~~~--p~~v~~lvl~~~~~-~~~~-~~~~~--~~~~-~~~~~~~-----~~~~~~~ 157 (273)
.- ..+++++|||-|++..+++.... --.|.+++++=++- ++.. +.++. .... ...+... ....+..
T Consensus 105 ~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt~yi~~~~lp~~ 184 (301)
T KOG3975|consen 105 YVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLTSYIYWILLPGF 184 (301)
T ss_pred hCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhheeeeeeeecChHH
Confidence 63 35799999999999999988632 23566666654421 1100 00000 0000 0000000 0000000
Q ss_pred HHHHhccccccccCCCChhhHHHHHHH-HHhcChhhHHH---HHHH-h--cccccccccCCCCCCEEEEecCCCCccchh
Q 024033 158 YASWASSFPRLVVDTKDAPSVEKFENC-LKRMRHEFALP---LAKT-V--FYSDEREILDKVETPCTIFQPSNDAVVPNS 230 (273)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~-~--~~~~~~~~l~~i~~P~lii~G~~D~~~~~~ 230 (273)
.+.....+ ....++.+ +++... +.-..+....+ ++.. + ........+.+-.+-+.+.+|..|.++|..
T Consensus 185 ir~~Li~~--~l~~~n~p---~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~~d~e~~een~d~l~Fyygt~DgW~p~~ 259 (301)
T KOG3975|consen 185 IRFILIKF--MLCGSNGP---QEFLSTALFLTHPQVVRNSVGLAAQEMEEVTTRDIEYCEENLDSLWFYYGTNDGWVPSH 259 (301)
T ss_pred HHHHHHHH--hcccCCCc---HHHHhhHHHhhcHHHHHHHhhhchHHHHHHHHhHHHHHHhcCcEEEEEccCCCCCcchH
Confidence 00000000 00111111 111100 00011111100 0000 0 001122345566778899999999999998
Q ss_pred HHHHHHHHcCCC-eEEEEcCCCCCCCCccChHHHHHHHHHhh
Q 024033 231 VAYYMQEKMKGK-STVEIIEADGHFPQLTAHLQLIDVLNKVL 271 (273)
Q Consensus 231 ~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 271 (273)
....+++++|.. .++-+ ++.-|..-....+..+..+.+.+
T Consensus 260 ~~d~~kdd~~eed~~Lde-dki~HAFV~~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 260 YYDYYKDDVPEEDLKLDE-DKIPHAFVVKHAQYMANAVFDMI 300 (301)
T ss_pred HHHHHhhhcchhceeecc-ccCCcceeecccHHHHHHHHHhh
Confidence 899999999853 34444 66889999999888888887765
No 131
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.63 E-value=8.8e-08 Score=81.64 Aligned_cols=217 Identities=19% Similarity=0.182 Sum_probs=114.9
Q ss_pred CceEEEecCCCCChhchhhhhhhhhc-CceEEEEecCCC--ccccCCCCC-CCCCC----cccccHHHHHHHHHHH----
Q 024033 21 KETLVLAHGFGGDQSIWDKITPVLSQ-HYRVLAFDWLFS--GAILNKDHQ-SLYNP----VKYSSYEAFADDLITL---- 88 (273)
Q Consensus 21 ~~~vvllHG~~~~~~~w~~~~~~L~~-~~~via~D~~G~--G~S~~~~~~-~~~~~----~~~~s~~~~a~~l~~~---- 88 (273)
.|.|||=||.+++...|..+.+.|.+ +|-|.++|.+|. |........ +.+.+ .+...+....+.|.+.
T Consensus 71 ~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP 150 (365)
T COG4188 71 LPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTASP 150 (365)
T ss_pred CCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcCc
Confidence 46789999999999999999999999 899999999993 332111100 00110 0111244444444444
Q ss_pred --HHHcCCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHHhcccc
Q 024033 89 --LEENDLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASWASSFP 166 (273)
Q Consensus 89 --~~~~~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (273)
-++++..++-++|||+||..++.++-.+.+....+--+......... ........+.+ --..|...+.
T Consensus 151 ~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~~~---~~~~~~~~l~q-------~~av~~~~~~ 220 (365)
T COG4188 151 ALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRICLD---PPGLNGRLLNQ-------CAAVWLPRQA 220 (365)
T ss_pred ccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcccC---CCCcChhhhcc-------ccccccchhh
Confidence 12345568999999999999999886655432221111100000000 00000000000 0000000000
Q ss_pred ccccCCCChhhHHHHHHHHHhcChhhHHHHHHHhcccccccccCCCCCCEEEEecCCCCccchhH-HHHHHHHcCCC-eE
Q 024033 167 RLVVDTKDAPSVEKFENCLKRMRHEFALPLAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSV-AYYMQEKMKGK-ST 244 (273)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~-~~ 244 (273)
..-..+. .+......+.. ...|. ..-+.++++|++++.|..|...|+.. +......+++. ..
T Consensus 221 ---~~~rDpr-----iravvA~~p~~-----~~~Fg---~tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~ 284 (365)
T COG4188 221 ---YDLRDPR-----IRAVVAINPAL-----GMIFG---TTGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKY 284 (365)
T ss_pred ---hcccccc-----ceeeeeccCCc-----ccccc---cccceeeecceeeecccccccCCcccccccccccCCcchhh
Confidence 0000000 00000011100 00111 23467899999999999999777653 33445566653 35
Q ss_pred EEEcCCCCCCCCccChHHH
Q 024033 245 VEIIEADGHFPQLTAHLQL 263 (273)
Q Consensus 245 ~~~i~~~gH~~~~e~p~~~ 263 (273)
+..++++.|+-++|-++++
T Consensus 285 ~~~vp~a~h~sfl~~~~~~ 303 (365)
T COG4188 285 LRLVPGATHFSFLELCKEG 303 (365)
T ss_pred eeecCCCccccccccCccc
Confidence 7788999999999888774
No 132
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.59 E-value=5e-07 Score=70.56 Aligned_cols=184 Identities=15% Similarity=0.186 Sum_probs=109.4
Q ss_pred eEEecC--CCceEEEecC--C--CCChhchhhhhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHH
Q 024033 14 AKIIGS--GKETLVLAHG--F--GGDQSIWDKITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLIT 87 (273)
Q Consensus 14 ~~~~G~--~~~~vvllHG--~--~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~ 87 (273)
+-++|+ ..+..+|||| | |....+-..+.+.+..+|+|... ||+.+... .+++....+..+
T Consensus 58 VDIwg~~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasv---gY~l~~q~-----------htL~qt~~~~~~ 123 (270)
T KOG4627|consen 58 VDIWGSTNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASV---GYNLCPQV-----------HTLEQTMTQFTH 123 (270)
T ss_pred EEEecCCCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEe---ccCcCccc-----------ccHHHHHHHHHH
Confidence 445673 3467899999 2 44567778888889999999987 56777221 124444444333
Q ss_pred ----HHHHcC-CCceEEEEEChhHHHHHHHHh-hCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHH
Q 024033 88 ----LLEEND-LKSTLFIGHSMSGMIGCIASV-KKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASW 161 (273)
Q Consensus 88 ----~~~~~~-~~~~~lvGhS~GG~ia~~~a~-~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (273)
+++... .+++++-|||.|+.+++++.. .+..+|.++++++.... ++.+.. . +
T Consensus 124 gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~---------------l~EL~~---t--e-- 181 (270)
T KOG4627|consen 124 GVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYD---------------LRELSN---T--E-- 181 (270)
T ss_pred HHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhh---------------HHHHhC---C--c--
Confidence 444433 345777799999999877654 45558888888765321 111000 0 0
Q ss_pred hccccccccCCCChhhHHHHHHHHHhcChhhHHHHHHHhcccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCC
Q 024033 162 ASSFPRLVVDTKDAPSVEKFENCLKRMRHEFALPLAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKG 241 (273)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~ 241 (273)
.. ..++-+ + +.... ..+|.+ .+..+++|++++.|+.|..--.+-.+.++.....
T Consensus 182 ---~g-~dlgLt-----~---~~ae~-------------~Scdl~-~~~~v~~~ilVv~~~~espklieQnrdf~~q~~~ 235 (270)
T KOG4627|consen 182 ---SG-NDLGLT-----E---RNAES-------------VSCDLW-EYTDVTVWILVVAAEHESPKLIEQNRDFADQLRK 235 (270)
T ss_pred ---cc-cccCcc-----c---chhhh-------------cCccHH-HhcCceeeeeEeeecccCcHHHHhhhhHHHHhhh
Confidence 00 000000 0 00000 011222 3577899999999999864444555566666653
Q ss_pred CeEEEEcCCCCCCCCccCh
Q 024033 242 KSTVEIIEADGHFPQLTAH 260 (273)
Q Consensus 242 ~~~~~~i~~~gH~~~~e~p 260 (273)
+.+..+++.+|+--+|+.
T Consensus 236 -a~~~~f~n~~hy~I~~~~ 253 (270)
T KOG4627|consen 236 -ASFTLFKNYDHYDIIEET 253 (270)
T ss_pred -cceeecCCcchhhHHHHh
Confidence 589999999998766543
No 133
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.58 E-value=1.9e-07 Score=80.82 Aligned_cols=98 Identities=22% Similarity=0.232 Sum_probs=78.7
Q ss_pred ceEEEecCCCCChhchhhhhhhhhc-Cce---EEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCCCce
Q 024033 22 ETLVLAHGFGGDQSIWDKITPVLSQ-HYR---VLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDLKST 97 (273)
Q Consensus 22 ~~vvllHG~~~~~~~w~~~~~~L~~-~~~---via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~~~~ 97 (273)
.++|++||...+...|..+...+.. +|. ++++++++...+ .+. ...-+.+.+-+.+.+...+-+++
T Consensus 60 ~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~---------~~~~~ql~~~V~~~l~~~ga~~v 129 (336)
T COG1075 60 EPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGGDGT-YSL---------AVRGEQLFAYVDEVLAKTGAKKV 129 (336)
T ss_pred ceEEEEccCcCCcchhhhhhhhhcchHHHhcccccccccccCCC-ccc---------cccHHHHHHHHHHHHhhcCCCce
Confidence 4899999999999999988888877 666 888888865111 111 12366667777778888888999
Q ss_pred EEEEEChhHHHHHHHHhhCc--ccccceEEeecC
Q 024033 98 LFIGHSMSGMIGCIASVKKP--ELFKRLILIGTS 129 (273)
Q Consensus 98 ~lvGhS~GG~ia~~~a~~~p--~~v~~lvl~~~~ 129 (273)
.|+||||||.++.+++...+ .+|+.++.++++
T Consensus 130 ~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp 163 (336)
T COG1075 130 NLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTP 163 (336)
T ss_pred EEEeecccchhhHHHHhhcCccceEEEEEEeccC
Confidence 99999999999999999888 899999999874
No 134
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.57 E-value=1.3e-06 Score=69.93 Aligned_cols=100 Identities=27% Similarity=0.439 Sum_probs=63.0
Q ss_pred CCceEEEecCCCCChhchhhhhhhhhcCceEE-EEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCCCceE
Q 024033 20 GKETLVLAHGFGGDQSIWDKITPVLSQHYRVL-AFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDLKSTL 98 (273)
Q Consensus 20 ~~~~vvllHG~~~~~~~w~~~~~~L~~~~~vi-a~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~~~~~ 98 (273)
++..|||.-||+.+...+..+. +.+.+.|+ ++|++-- . ++. + --+.+.++
T Consensus 10 ~~~LilfF~GWg~d~~~f~hL~--~~~~~D~l~~yDYr~l-----------------~-~d~---~------~~~y~~i~ 60 (213)
T PF04301_consen 10 GKELILFFAGWGMDPSPFSHLI--LPENYDVLICYDYRDL-----------------D-FDF---D------LSGYREIY 60 (213)
T ss_pred CCeEEEEEecCCCChHHhhhcc--CCCCccEEEEecCccc-----------------c-ccc---c------cccCceEE
Confidence 4468999999999999988764 23456654 5554321 0 110 1 12457899
Q ss_pred EEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHH
Q 024033 99 FIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISN 153 (273)
Q Consensus 99 lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (273)
|||||||-.+|..+....| ++..+.++.++..... ..|..+...+..+..
T Consensus 61 lvAWSmGVw~A~~~l~~~~--~~~aiAINGT~~Pid~---~~GIpp~iF~~Tl~~ 110 (213)
T PF04301_consen 61 LVAWSMGVWAANRVLQGIP--FKRAIAINGTPYPIDD---EYGIPPAIFAGTLEN 110 (213)
T ss_pred EEEEeHHHHHHHHHhccCC--cceeEEEECCCCCcCC---CCCCCHHHHHHHHHh
Confidence 9999999999988765543 6777778877653322 225555544444443
No 135
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.57 E-value=7.7e-07 Score=69.88 Aligned_cols=180 Identities=15% Similarity=0.216 Sum_probs=107.6
Q ss_pred ceEEEecCCCCChhchhhhhhhhhc-CceEEEEecCCCccccC--CCCCCCCCCcc--------cccHHHHHHHHHHHHH
Q 024033 22 ETLVLAHGFGGDQSIWDKITPVLSQ-HYRVLAFDWLFSGAILN--KDHQSLYNPVK--------YSSYEAFADDLITLLE 90 (273)
Q Consensus 22 ~~vvllHG~~~~~~~w~~~~~~L~~-~~~via~D~~G~G~S~~--~~~~~~~~~~~--------~~s~~~~a~~l~~~~~ 90 (273)
.+||++||.++++..|.++...|.- +-+.|+|-.|=.=.+.. .....+++... -.++...++-+..+++
T Consensus 4 atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li~ 83 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLID 83 (206)
T ss_pred EEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHHH
Confidence 4799999999999999877777655 56666663221111000 00000111100 1235556666666666
Q ss_pred Hc---CC--CceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHHhccc
Q 024033 91 EN---DL--KSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASWASSF 165 (273)
Q Consensus 91 ~~---~~--~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (273)
.. |+ +++.+-|.||||+++++.+..+|..+.+.+-..+-. +. . ...+..|
T Consensus 84 ~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~---p~----------~--------~~~~~~~---- 138 (206)
T KOG2112|consen 84 NEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFL---PR----------A--------SIGLPGW---- 138 (206)
T ss_pred HHHHcCCCccceeEcccCchHHHHHHHHhccccccceeecccccc---cc----------c--------hhhccCC----
Confidence 53 44 468889999999999999999987766655432210 00 0 0000000
Q ss_pred cccccCCCChhhHHHHHHHHHhcChhhHHHHHHHhcccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHcCC---C
Q 024033 166 PRLVVDTKDAPSVEKFENCLKRMRHEFALPLAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKG---K 242 (273)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~---~ 242 (273)
.+. . + .+|++..||+.|+++|....+.-++.+.. .
T Consensus 139 -----------------------~~~--------------~---~--~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~ 176 (206)
T KOG2112|consen 139 -----------------------LPG--------------V---N--YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVR 176 (206)
T ss_pred -----------------------ccc--------------c---C--cchhheecccCCceeehHHHHHHHHHHHHcCCc
Confidence 000 0 0 57999999999999998776655554421 2
Q ss_pred eEEEEcCCCCCCCCccChHHHHHHHH
Q 024033 243 STVEIIEADGHFPQLTAHLQLIDVLN 268 (273)
Q Consensus 243 ~~~~~i~~~gH~~~~e~p~~~~~~i~ 268 (273)
.+++.+++.+|...-+.-+.+...|+
T Consensus 177 ~~f~~y~g~~h~~~~~e~~~~~~~~~ 202 (206)
T KOG2112|consen 177 VTFKPYPGLGHSTSPQELDDLKSWIK 202 (206)
T ss_pred eeeeecCCccccccHHHHHHHHHHHH
Confidence 68899999999876655555544443
No 136
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.56 E-value=3e-06 Score=67.15 Aligned_cols=186 Identities=17% Similarity=0.232 Sum_probs=108.9
Q ss_pred CceEEEecCCCCChhchhh----hhhhhhcCceEEEEecCC----CccccC--------CC-----CCCCCC-----Ccc
Q 024033 21 KETLVLAHGFGGDQSIWDK----ITPVLSQHYRVLAFDWLF----SGAILN--------KD-----HQSLYN-----PVK 74 (273)
Q Consensus 21 ~~~vvllHG~~~~~~~w~~----~~~~L~~~~~via~D~~G----~G~S~~--------~~-----~~~~~~-----~~~ 74 (273)
++.|||||||-.|...|+. +...|.+.+.++.+|-|- -+.++. |. ...++. ...
T Consensus 5 k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~~~ 84 (230)
T KOG2551|consen 5 KLRVLCLHGFRQSGKVFSEKTGSLRKLLKKLAELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASFTE 84 (230)
T ss_pred CceEEEecchhhccHHHHHHhhhHHHHHHhhheEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccccccc
Confidence 4579999999999988864 344456667888888762 111110 00 000111 122
Q ss_pred cccHHHHHHHHHHHHHHcCCCce-EEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHH
Q 024033 75 YSSYEAFADDLITLLEENDLKST-LFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISN 153 (273)
Q Consensus 75 ~~s~~~~a~~l~~~~~~~~~~~~-~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (273)
|..++.-.+-|.+.+.+.| ++ -|+|.|=|+.++..++...+. ++....-++ +
T Consensus 85 ~~~~eesl~yl~~~i~enG--PFDGllGFSQGA~laa~l~~~~~~---~~~~~~~P~----------------~------ 137 (230)
T KOG2551|consen 85 YFGFEESLEYLEDYIKENG--PFDGLLGFSQGAALAALLAGLGQK---GLPYVKQPP----------------F------ 137 (230)
T ss_pred ccChHHHHHHHHHHHHHhC--CCccccccchhHHHHHHhhccccc---CCcccCCCC----------------e------
Confidence 4456666777777777765 43 699999999998888762111 111000000 0
Q ss_pred HHHhHHHHhccccccccCCCChhhHHHHHHHHHhcChhhHHHHHHHhcccccccccCCCCCCEEEEecCCCCccchhHHH
Q 024033 154 VETNYASWASSFPRLVVDTKDAPSVEKFENCLKRMRHEFALPLAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSVAY 233 (273)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~ 233 (273)
+ |.-.+-+...+. . .. +.......+++|.|-|.|+.|.++|.....
T Consensus 138 -----k-----F~v~~SGf~~~~--~----~~------------------~~~~~~~~i~~PSLHi~G~~D~iv~~~~s~ 183 (230)
T KOG2551|consen 138 -----K-----FAVFISGFKFPS--K----KL------------------DESAYKRPLSTPSLHIFGETDTIVPSERSE 183 (230)
T ss_pred -----E-----EEEEEecCCCCc--c----hh------------------hhhhhccCCCCCeeEEecccceeecchHHH
Confidence 0 000000000000 0 00 011124567999999999999999999999
Q ss_pred HHHHHcCCCeEEEEcCCCCCCCCccChHHHHHHHHHhh
Q 024033 234 YMQEKMKGKSTVEIIEADGHFPQLTAHLQLIDVLNKVL 271 (273)
Q Consensus 234 ~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 271 (273)
.|++..++. .+.. -.+||+++..++ ..+.|.+||
T Consensus 184 ~L~~~~~~a-~vl~-HpggH~VP~~~~--~~~~i~~fi 217 (230)
T KOG2551|consen 184 QLAESFKDA-TVLE-HPGGHIVPNKAK--YKEKIADFI 217 (230)
T ss_pred HHHHhcCCC-eEEe-cCCCccCCCchH--HHHHHHHHH
Confidence 999999864 4444 458999998774 555556655
No 137
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.55 E-value=4.4e-07 Score=74.47 Aligned_cols=103 Identities=23% Similarity=0.278 Sum_probs=62.4
Q ss_pred CCCceEEEecCCCCChhchhhhhhhh----hcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHH----
Q 024033 19 SGKETLVLAHGFGGDQSIWDKITPVL----SQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLE---- 90 (273)
Q Consensus 19 ~~~~~vvllHG~~~~~~~w~~~~~~L----~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~---- 90 (273)
+++..+|||||+..+...--.....| .-...++.+.||..|.-.. |...+ .+...-+..+.++++
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~------Y~~d~-~~a~~s~~~l~~~L~~L~~ 88 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLG------YFYDR-ESARFSGPALARFLRDLAR 88 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhh------hhhhh-hhHHHHHHHHHHHHHHHHh
Confidence 35578999999988754432222222 2234799999999885311 11111 123333444444444
Q ss_pred HcCCCceEEEEEChhHHHHHHHHhh----Cc-----ccccceEEeec
Q 024033 91 ENDLKSTLFIGHSMSGMIGCIASVK----KP-----ELFKRLILIGT 128 (273)
Q Consensus 91 ~~~~~~~~lvGhS~GG~ia~~~a~~----~p-----~~v~~lvl~~~ 128 (273)
..+.++++|++||||+.+.+..... .+ .++..++++++
T Consensus 89 ~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~Ap 135 (233)
T PF05990_consen 89 APGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAP 135 (233)
T ss_pred ccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECC
Confidence 3467899999999999998776532 21 35677777653
No 138
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.54 E-value=3.5e-07 Score=78.57 Aligned_cols=106 Identities=20% Similarity=0.175 Sum_probs=57.4
Q ss_pred ceEEEecCCCCChhc--------------h----hhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHH
Q 024033 22 ETLVLAHGFGGDQSI--------------W----DKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFA 82 (273)
Q Consensus 22 ~~vvllHG~~~~~~~--------------w----~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a 82 (273)
|.||++||.++.... | ..+...|.+ +|-|+++|.+|+|....+..........+.++..+.
T Consensus 116 PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~ 195 (390)
T PF12715_consen 116 PAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNL 195 (390)
T ss_dssp EEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHH
T ss_pred CEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHHHH
Confidence 689999998765422 2 124666777 799999999999987543311100000111122111
Q ss_pred ------------HH---HHHHHHHc---CCCceEEEEEChhHHHHHHHHhhCcccccceEEeec
Q 024033 83 ------------DD---LITLLEEN---DLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGT 128 (273)
Q Consensus 83 ------------~~---l~~~~~~~---~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~ 128 (273)
-| +.++++.+ +-+++.++|+||||..++.+|+..+ +|++.|..+.
T Consensus 196 l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALDd-RIka~v~~~~ 258 (390)
T PF12715_consen 196 LMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALDD-RIKATVANGY 258 (390)
T ss_dssp HHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH-T-T--EEEEES-
T ss_pred HHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcch-hhHhHhhhhh
Confidence 11 22344333 3467999999999999999999865 7887776553
No 139
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.51 E-value=5.2e-06 Score=71.33 Aligned_cols=98 Identities=15% Similarity=0.183 Sum_probs=61.5
Q ss_pred CceEEEecCCC---CChhch-hhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHH---c
Q 024033 21 KETLVLAHGFG---GDQSIW-DKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEE---N 92 (273)
Q Consensus 21 ~~~vvllHG~~---~~~~~w-~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~---~ 92 (273)
.|.||++||-+ ++.... ..+...+.. ++.|+++|+|-- |.+ .+ +. .+++..+.+.-+.++ +
T Consensus 79 ~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrla-----Pe~--~~---p~-~~~d~~~a~~~l~~~~~~~ 147 (312)
T COG0657 79 APVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLA-----PEH--PF---PA-ALEDAYAAYRWLRANAAEL 147 (312)
T ss_pred CcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCC-----CCC--CC---Cc-hHHHHHHHHHHHHhhhHhh
Confidence 57899999943 344444 444444444 899999999763 321 01 11 255533333333333 3
Q ss_pred C--CCceEEEEEChhHHHHHHHHhhCcc----cccceEEeecC
Q 024033 93 D--LKSTLFIGHSMSGMIGCIASVKKPE----LFKRLILIGTS 129 (273)
Q Consensus 93 ~--~~~~~lvGhS~GG~ia~~~a~~~p~----~v~~lvl~~~~ 129 (273)
+ .+++.+.|+|-||.+++.++..-.+ ...+.+++.+.
T Consensus 148 g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~ 190 (312)
T COG0657 148 GIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPL 190 (312)
T ss_pred CCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecc
Confidence 4 4679999999999999998876543 34667776653
No 140
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.39 E-value=1.9e-05 Score=67.91 Aligned_cols=98 Identities=23% Similarity=0.329 Sum_probs=68.5
Q ss_pred CceEEEecCCCC-----Chhchhhhhhhhhc--CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHH--
Q 024033 21 KETLVLAHGFGG-----DQSIWDKITPVLSQ--HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEE-- 91 (273)
Q Consensus 21 ~~~vvllHG~~~-----~~~~w~~~~~~L~~--~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~-- 91 (273)
.|.||++||-|- +...++.+...+.. +..|+++|+|= .|.+. + | .. ++|-.+.+.-+.++
T Consensus 90 ~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRL-----APEh~--~-P--a~-y~D~~~Al~w~~~~~~ 158 (336)
T KOG1515|consen 90 LPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRL-----APEHP--F-P--AA-YDDGWAALKWVLKNSW 158 (336)
T ss_pred ceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCccc-----CCCCC--C-C--cc-chHHHHHHHHHHHhHH
Confidence 467999999542 46777888888866 57788888865 34321 1 1 12 56666666655553
Q ss_pred ----cCCCceEEEEEChhHHHHHHHHhhC------cccccceEEeecC
Q 024033 92 ----NDLKSTLFIGHSMSGMIGCIASVKK------PELFKRLILIGTS 129 (273)
Q Consensus 92 ----~~~~~~~lvGhS~GG~ia~~~a~~~------p~~v~~lvl~~~~ 129 (273)
.+.++++|+|-|-||.||..+|.+. +-++++.|++-+.
T Consensus 159 ~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~ 206 (336)
T KOG1515|consen 159 LKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPF 206 (336)
T ss_pred HHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecc
Confidence 3667899999999999998887542 4578899998763
No 141
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.37 E-value=4.3e-07 Score=79.79 Aligned_cols=108 Identities=21% Similarity=0.305 Sum_probs=59.4
Q ss_pred CceEEEecCCCCChhchhhhhhhhhc-CceEEEEecCCC-ccccCC--CCC----C-----CCC----------Cc-ccc
Q 024033 21 KETLVLAHGFGGDQSIWDKITPVLSQ-HYRVLAFDWLFS-GAILNK--DHQ----S-----LYN----------PV-KYS 76 (273)
Q Consensus 21 ~~~vvllHG~~~~~~~w~~~~~~L~~-~~~via~D~~G~-G~S~~~--~~~----~-----~~~----------~~-~~~ 76 (273)
-|.|||-||++++...+..+...|+. +|-|+++|++.. +-.... +.. . ..+ .. .+.
T Consensus 100 ~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (379)
T PF03403_consen 100 FPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEEFE 179 (379)
T ss_dssp EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGHHH
T ss_pred CCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhHHH
Confidence 47899999999999999999999988 799999999953 211000 000 0 000 00 000
Q ss_pred ----cHHHHHHHHHHHHHH--------------------------cCCCceEEEEEChhHHHHHHHHhhCcccccceEEe
Q 024033 77 ----SYEAFADDLITLLEE--------------------------NDLKSTLFIGHSMSGMIGCIASVKKPELFKRLILI 126 (273)
Q Consensus 77 ----s~~~~a~~l~~~~~~--------------------------~~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~ 126 (273)
-++.-++++..+++. ++.+++.++|||+||..+...+.+. .++++.|++
T Consensus 180 ~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~L 258 (379)
T PF03403_consen 180 LRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGILL 258 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEEEe
Confidence 011223333333322 2345799999999999999888776 689999999
Q ss_pred ecC
Q 024033 127 GTS 129 (273)
Q Consensus 127 ~~~ 129 (273)
|+.
T Consensus 259 D~W 261 (379)
T PF03403_consen 259 DPW 261 (379)
T ss_dssp S--
T ss_pred CCc
Confidence 974
No 142
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.36 E-value=2.5e-06 Score=68.84 Aligned_cols=106 Identities=16% Similarity=0.156 Sum_probs=70.9
Q ss_pred eEEEecCCCCChhchhhhhhhhhcCce------EEEEecCCCccccCCCCC--CCCCCcc------cccHHHHHHHHHHH
Q 024033 23 TLVLAHGFGGDQSIWDKITPVLSQHYR------VLAFDWLFSGAILNKDHQ--SLYNPVK------YSSYEAFADDLITL 88 (273)
Q Consensus 23 ~vvllHG~~~~~~~w~~~~~~L~~~~~------via~D~~G~G~S~~~~~~--~~~~~~~------~~s~~~~a~~l~~~ 88 (273)
|.+||||.+++++....++..|.+.++ ++..|--|.=.. ....+ ...+..+ -.|..+++..+..+
T Consensus 47 PTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~-tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~ 125 (288)
T COG4814 47 PTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKV-TGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKA 125 (288)
T ss_pred ceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEE-eeeecccCCCCeEEEEEecCcCchhhHHHHHHHH
Confidence 689999999999999999999988763 556666562110 11000 0000000 12355666666666
Q ss_pred HHH----cCCCceEEEEEChhHHHHHHHHhhCcc-----cccceEEeecC
Q 024033 89 LEE----NDLKSTLFIGHSMSGMIGCIASVKKPE-----LFKRLILIGTS 129 (273)
Q Consensus 89 ~~~----~~~~~~~lvGhS~GG~ia~~~a~~~p~-----~v~~lvl~~~~ 129 (273)
|.. .+++++.+|||||||.-..+++..+.. .++++|.++++
T Consensus 126 msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gp 175 (288)
T COG4814 126 MSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGP 175 (288)
T ss_pred HHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccc
Confidence 654 588999999999999999888876433 46888888764
No 143
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.32 E-value=6.9e-05 Score=63.48 Aligned_cols=86 Identities=19% Similarity=0.216 Sum_probs=55.3
Q ss_pred CCceEEEecCCCCChhch------hhhhhhhhc--CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHH
Q 024033 20 GKETLVLAHGFGGDQSIW------DKITPVLSQ--HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEE 91 (273)
Q Consensus 20 ~~~~vvllHG~~~~~~~w------~~~~~~L~~--~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~ 91 (273)
...+||+.-|.++.-+.- +.....+++ +-+|+.+.+||.|.|..+. |.++++.|-.+.++-
T Consensus 136 ~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~-----------s~~dLv~~~~a~v~y 204 (365)
T PF05677_consen 136 PQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP-----------SRKDLVKDYQACVRY 204 (365)
T ss_pred CCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC-----------CHHHHHHHHHHHHHH
Confidence 446899998876544331 122333333 6789999999999993221 245555554443332
Q ss_pred c-----CC--CceEEEEEChhHHHHHHHHhhC
Q 024033 92 N-----DL--KSTLFIGHSMSGMIGCIASVKK 116 (273)
Q Consensus 92 ~-----~~--~~~~lvGhS~GG~ia~~~a~~~ 116 (273)
| |+ +++++.|||+||.|+..+..++
T Consensus 205 L~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 205 LRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred HHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 2 33 5799999999999988755554
No 144
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.31 E-value=3.9e-05 Score=68.19 Aligned_cols=89 Identities=19% Similarity=0.248 Sum_probs=64.5
Q ss_pred cCCCCCh-hchhhhhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHc-----CCCceEEEE
Q 024033 28 HGFGGDQ-SIWDKITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEEN-----DLKSTLFIG 101 (273)
Q Consensus 28 HG~~~~~-~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~-----~~~~~~lvG 101 (273)
||-|-.+ ..=+.+...|..++.|+.+.+.- .|. +..|+++.+.....++++. +..+++|||
T Consensus 80 HGpGIGGFK~dSevG~AL~~GHPvYFV~F~p-----~P~--------pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liG 146 (581)
T PF11339_consen 80 HGPGIGGFKPDSEVGVALRAGHPVYFVGFFP-----EPE--------PGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIG 146 (581)
T ss_pred CCCCccCCCcccHHHHHHHcCCCeEEEEecC-----CCC--------CCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEe
Confidence 5654332 22367888899988888765421 222 2345888888777777653 234899999
Q ss_pred EChhHHHHHHHHhhCcccccceEEeecC
Q 024033 102 HSMSGMIGCIASVKKPELFKRLILIGTS 129 (273)
Q Consensus 102 hS~GG~ia~~~a~~~p~~v~~lvl~~~~ 129 (273)
..=||..++.+|+.+|+++.-+|+-+++
T Consensus 147 nCQgGWa~~mlAA~~Pd~~gplvlaGaP 174 (581)
T PF11339_consen 147 NCQGGWAAMMLAALRPDLVGPLVLAGAP 174 (581)
T ss_pred ccHHHHHHHHHHhcCcCccCceeecCCC
Confidence 9999999999999999999888877664
No 145
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.30 E-value=5.4e-06 Score=73.68 Aligned_cols=52 Identities=23% Similarity=0.352 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHHc-----CCCceEEEEEChhHHHHHHHHhhCcccccceEEeecC
Q 024033 78 YEAFADDLITLLEEN-----DLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTS 129 (273)
Q Consensus 78 ~~~~a~~l~~~~~~~-----~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~ 129 (273)
.+.++++|.-.+++. +-++.+|+|+||||+.|+.++.++|+++.+++.++++
T Consensus 266 ~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 266 WLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGS 322 (411)
T ss_pred HHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccc
Confidence 445667788777764 3356899999999999999999999999999998864
No 146
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.28 E-value=1.3e-06 Score=72.55 Aligned_cols=110 Identities=16% Similarity=0.138 Sum_probs=64.9
Q ss_pred CCceEEEecCCCCChhch--hhhhhhhhc-C----ceEEEEecCCCccccCCCCC-----CCC-CCcccccH-HHHHHHH
Q 024033 20 GKETLVLAHGFGGDQSIW--DKITPVLSQ-H----YRVLAFDWLFSGAILNKDHQ-----SLY-NPVKYSSY-EAFADDL 85 (273)
Q Consensus 20 ~~~~vvllHG~~~~~~~w--~~~~~~L~~-~----~~via~D~~G~G~S~~~~~~-----~~~-~~~~~~s~-~~~a~~l 85 (273)
.-|.|+|+||.......| ......+.+ + .-+|+++..+.+........ ... .......+ +-++++|
T Consensus 23 ~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~el 102 (251)
T PF00756_consen 23 PYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGGDAYETFLTEEL 102 (251)
T ss_dssp TEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTHHHHHHHHHTHH
T ss_pred CCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCCcccceehhccc
Confidence 347899999983222222 122322222 2 34677777665511011000 000 00111123 3456788
Q ss_pred HHHHHH-cCCC--ceEEEEEChhHHHHHHHHhhCcccccceEEeecC
Q 024033 86 ITLLEE-NDLK--STLFIGHSMSGMIGCIASVKKPELFKRLILIGTS 129 (273)
Q Consensus 86 ~~~~~~-~~~~--~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~ 129 (273)
...+++ +... +..++|+||||..|+.++.+||+.+.+++.+++.
T Consensus 103 ~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~ 149 (251)
T PF00756_consen 103 IPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGA 149 (251)
T ss_dssp HHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEE
T ss_pred hhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcc
Confidence 887775 3332 2699999999999999999999999999999864
No 147
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.22 E-value=6e-06 Score=69.48 Aligned_cols=98 Identities=16% Similarity=0.290 Sum_probs=66.2
Q ss_pred cCCCceEEEecCCCCChhchh--hhhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHH-HHHHcCC
Q 024033 18 GSGKETLVLAHGFGGDQSIWD--KITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLIT-LLEENDL 94 (273)
Q Consensus 18 G~~~~~vvllHG~~~~~~~w~--~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~-~~~~~~~ 94 (273)
|+|+..|+|.-|. +..|. -+...++-+|.|..+.+|||+.|.. .+ +. ..+.. -++.+.+ .+..++.
T Consensus 240 ~ngq~LvIC~EGN---AGFYEvG~m~tP~~lgYsvLGwNhPGFagSTG-~P---~p---~n~~n-A~DaVvQfAI~~Lgf 308 (517)
T KOG1553|consen 240 GNGQDLVICFEGN---AGFYEVGVMNTPAQLGYSVLGWNHPGFAGSTG-LP---YP---VNTLN-AADAVVQFAIQVLGF 308 (517)
T ss_pred CCCceEEEEecCC---ccceEeeeecChHHhCceeeccCCCCccccCC-CC---Cc---ccchH-HHHHHHHHHHHHcCC
Confidence 4566677887774 34442 2444566689999999999999932 21 11 12122 2333333 3455665
Q ss_pred --CceEEEEEChhHHHHHHHHhhCcccccceEEee
Q 024033 95 --KSTLFIGHSMSGMIGCIASVKKPELFKRLILIG 127 (273)
Q Consensus 95 --~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~ 127 (273)
+.++|.|||.||.-+..+|..||+ |+++|+=+
T Consensus 309 ~~edIilygWSIGGF~~~waAs~YPd-VkavvLDA 342 (517)
T KOG1553|consen 309 RQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDA 342 (517)
T ss_pred CccceEEEEeecCCchHHHHhhcCCC-ceEEEeec
Confidence 569999999999999999999997 78877633
No 148
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.19 E-value=1.5e-05 Score=71.75 Aligned_cols=122 Identities=16% Similarity=0.181 Sum_probs=73.6
Q ss_pred ccccccceEEe--cCCCceEEEecCCCCChhch--hhhhhhhhc--CceEEEEecCCCccccCCCCCCCCCCcccccHHH
Q 024033 7 GLSAAMNAKII--GSGKETLVLAHGFGGDQSIW--DKITPVLSQ--HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEA 80 (273)
Q Consensus 7 ~~~~~~~~~~~--G~~~~~vvllHG~~~~~~~w--~~~~~~L~~--~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~ 80 (273)
.|+-++.+... .+++|.+|++-|=+.-...| ..+.-.|++ +--|+++.+|-||.| .|......+..+|.|.+.
T Consensus 13 tf~qRY~~n~~~~~~~gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S-~P~~~~s~~nL~yLt~~Q 91 (434)
T PF05577_consen 13 TFSQRYWVNDQYYKPGGPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKS-QPFGDLSTENLRYLTSEQ 91 (434)
T ss_dssp EEEEEEEEE-TT--TTSEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB--TTGGGGGSTTTC-SHHH
T ss_pred eEEEEEEEEhhhcCCCCCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCC-CCccccchhhHHhcCHHH
Confidence 45555544321 34455555554433322223 224455666 567999999999999 553221223356888999
Q ss_pred HHHHHHHHHHHcC-------CCceEEEEEChhHHHHHHHHhhCcccccceEEeecC
Q 024033 81 FADDLITLLEEND-------LKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTS 129 (273)
Q Consensus 81 ~a~~l~~~~~~~~-------~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~ 129 (273)
..+|+..+++.+. -.|++++|=|.||++|..+-.+||+.|.+.+.-+++
T Consensus 92 ALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSap 147 (434)
T PF05577_consen 92 ALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAP 147 (434)
T ss_dssp HHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--
T ss_pred HHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccce
Confidence 9999998887642 236999999999999999999999999998877653
No 149
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.18 E-value=3.2e-05 Score=73.79 Aligned_cols=201 Identities=16% Similarity=0.214 Sum_probs=114.9
Q ss_pred CceEEEecCCCCCh-------hchhhhhhhhhc-CceEEEEecCCCccccCCCCC-CCC-CCcccccHHHHHHHHHHHHH
Q 024033 21 KETLVLAHGFGGDQ-------SIWDKITPVLSQ-HYRVLAFDWLFSGAILNKDHQ-SLY-NPVKYSSYEAFADDLITLLE 90 (273)
Q Consensus 21 ~~~vvllHG~~~~~-------~~w~~~~~~L~~-~~~via~D~~G~G~S~~~~~~-~~~-~~~~~~s~~~~a~~l~~~~~ 90 (273)
-|.||.+||-+++. -.|..+ .... ++-|+.+|.||.|.. ..+.+ ... +-.... .++....+..+++
T Consensus 526 yPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs~~~-G~~~~~~~~~~lG~~e-v~D~~~~~~~~~~ 601 (755)
T KOG2100|consen 526 YPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGSGGY-GWDFRSALPRNLGDVE-VKDQIEAVKKVLK 601 (755)
T ss_pred CCEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCcCCc-chhHHHHhhhhcCCcc-hHHHHHHHHHHHh
Confidence 35678888877632 222222 2333 799999999998865 11100 000 001123 6677777777776
Q ss_pred Hc--CCCceEEEEEChhHHHHHHHHhhCcccccc-eEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHHhccccc
Q 024033 91 EN--DLKSTLFIGHSMSGMIGCIASVKKPELFKR-LILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASWASSFPR 167 (273)
Q Consensus 91 ~~--~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~-lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (273)
.. +-+++.+.|||.||.+++.+....|+.+.+ .+.+++...+. -+...+. +.+
T Consensus 602 ~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~---~yds~~t---------------ery------ 657 (755)
T KOG2100|consen 602 LPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL---YYDSTYT---------------ERY------ 657 (755)
T ss_pred cccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee---eeccccc---------------Hhh------
Confidence 54 445799999999999999999999955544 47776532211 0000000 000
Q ss_pred cccCCCChhhHHHHHHHHHhcChhhHHHHHHHhcccccccccCCCCCCE-EEEecCCCCccchhHHHHHHHHcCC---Ce
Q 024033 168 LVVDTKDAPSVEKFENCLKRMRHEFALPLAKTVFYSDEREILDKVETPC-TIFQPSNDAVVPNSVAYYMQEKMKG---KS 243 (273)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~-lii~G~~D~~~~~~~~~~~~~~~~~---~~ 243 (273)
++... .....+.+ ......+..++.|. |++||+.|.-++.+....+.+.+.. ..
T Consensus 658 --mg~p~-~~~~~y~e-------------------~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~ 715 (755)
T KOG2100|consen 658 --MGLPS-ENDKGYEE-------------------SSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPF 715 (755)
T ss_pred --cCCCc-cccchhhh-------------------ccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCce
Confidence 00000 00000111 11233455566676 9999999999988766666655431 15
Q ss_pred EEEEcCCCCCCCCccCh-HHHHHHHHHhh
Q 024033 244 TVEIIEADGHFPQLTAH-LQLIDVLNKVL 271 (273)
Q Consensus 244 ~~~~i~~~gH~~~~e~p-~~~~~~i~~fl 271 (273)
++.++|+.+|..-.-.+ ..+...+..|+
T Consensus 716 ~~~vypde~H~is~~~~~~~~~~~~~~~~ 744 (755)
T KOG2100|consen 716 RLLVYPDENHGISYVEVISHLYEKLDRFL 744 (755)
T ss_pred EEEEeCCCCcccccccchHHHHHHHHHHH
Confidence 88899999998877553 33344444443
No 150
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.13 E-value=4.4e-05 Score=63.27 Aligned_cols=117 Identities=18% Similarity=0.218 Sum_probs=78.0
Q ss_pred cceEEe---c--CCCceEEEecCCCCChhchhhhh--hhhhc--CceEEEEecCCCccccCCCCC-CCCCCc----cccc
Q 024033 12 MNAKII---G--SGKETLVLAHGFGGDQSIWDKIT--PVLSQ--HYRVLAFDWLFSGAILNKDHQ-SLYNPV----KYSS 77 (273)
Q Consensus 12 ~~~~~~---G--~~~~~vvllHG~~~~~~~w~~~~--~~L~~--~~~via~D~~G~G~S~~~~~~-~~~~~~----~~~s 77 (273)
..|+++ | ++.|.||++||-++++.-.+... +.|++ +|-|+.||- +..+-++... ..+.+. ....
T Consensus 47 r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg--~~~~wn~~~~~~~~~p~~~~~g~dd 124 (312)
T COG3509 47 RSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDG--YDRAWNANGCGNWFGPADRRRGVDD 124 (312)
T ss_pred cceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCc--cccccCCCcccccCCcccccCCccH
Confidence 355555 2 34568999999999887766655 56665 688888852 2222101000 011111 1222
Q ss_pred HHHHHHHHHHHHHHcCCC--ceEEEEEChhHHHHHHHHhhCcccccceEEeecCC
Q 024033 78 YEAFADDLITLLEENDLK--STLFIGHSMSGMIGCIASVKKPELFKRLILIGTSP 130 (273)
Q Consensus 78 ~~~~a~~l~~~~~~~~~~--~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (273)
...+.+.+..+..+.+++ ++.+.|.|-||..+..++..+|+.+.++-++++..
T Consensus 125 Vgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 125 VGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred HHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 445555566677777887 69999999999999999999999999999988754
No 151
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.12 E-value=3.4e-05 Score=66.93 Aligned_cols=154 Identities=15% Similarity=0.254 Sum_probs=92.5
Q ss_pred HHHHHHHc---CCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCCCccCCCCCCCCCChhhHHHHHHHHHHhHHHH
Q 024033 85 LITLLEEN---DLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPRYINTDDYEGGFEPSDIENLISNVETNYASW 161 (273)
Q Consensus 85 l~~~~~~~---~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (273)
+.+++++. .++++++.|.|==|..+...|+ ...||++++-+... .++. . ..+...++.+
T Consensus 159 vq~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vid--~LN~------------~---~~l~h~y~~y 220 (367)
T PF10142_consen 159 VQEFLKKKFGVNIEKFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVID--VLNM------------K---ANLEHQYRSY 220 (367)
T ss_pred HHHHHHhhcCCCccEEEEeCCchHhHHHHHhhc-cCcceeEEeeEEEc--cCCc------------H---HHHHHHHHHh
Confidence 33455544 6889999999999999988888 45689988865321 1111 1 1122222222
Q ss_pred hccccccccCCCChhhHHHHHH-H-HHhcChhhHHHHHHHhcccccccccCCCCCCEEEEecCCCCccchhHHHHHHHHc
Q 024033 162 ASSFPRLVVDTKDAPSVEKFEN-C-LKRMRHEFALPLAKTVFYSDEREILDKVETPCTIFQPSNDAVVPNSVAYYMQEKM 239 (273)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~ 239 (273)
...|.. ....|.. . ...++.+.+.++.+. -|--....++++|.++|.|..|..+.+...+.+...+
T Consensus 221 G~~ws~---------a~~dY~~~gi~~~l~tp~f~~L~~i---vDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L 288 (367)
T PF10142_consen 221 GGNWSF---------AFQDYYNEGITQQLDTPEFDKLMQI---VDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKL 288 (367)
T ss_pred CCCCcc---------chhhhhHhCchhhcCCHHHHHHHHh---cCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhC
Confidence 211110 1111111 0 111122222222222 1333344667999999999999999999999998999
Q ss_pred CCCeEEEEcCCCCCCCCccChHHHHHHHHHhh
Q 024033 240 KGKSTVEIIEADGHFPQLTAHLQLIDVLNKVL 271 (273)
Q Consensus 240 ~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 271 (273)
|+.+.+..+|+++|..-. ..+.+.|..|+
T Consensus 289 ~G~K~lr~vPN~~H~~~~---~~~~~~l~~f~ 317 (367)
T PF10142_consen 289 PGEKYLRYVPNAGHSLIG---SDVVQSLRAFY 317 (367)
T ss_pred CCCeeEEeCCCCCcccch---HHHHHHHHHHH
Confidence 987899999999998877 34444555554
No 152
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.08 E-value=3.6e-05 Score=65.32 Aligned_cols=45 Identities=24% Similarity=0.325 Sum_probs=35.7
Q ss_pred CCCCEEEEecCCCCccchhHHHHHHHHc--CC--CeEEEEcCCCCCCCC
Q 024033 212 VETPCTIFQPSNDAVVPNSVAYYMQEKM--KG--KSTVEIIEADGHFPQ 256 (273)
Q Consensus 212 i~~P~lii~G~~D~~~~~~~~~~~~~~~--~~--~~~~~~i~~~gH~~~ 256 (273)
-++|++|.+|..|.++|+...+.+.+.+ .+ .+++..++..+|...
T Consensus 218 P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~ 266 (290)
T PF03583_consen 218 PTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGA 266 (290)
T ss_pred CCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhh
Confidence 3799999999999999998888776655 22 356777788899753
No 153
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=98.07 E-value=4.3e-05 Score=60.78 Aligned_cols=53 Identities=23% Similarity=0.233 Sum_probs=41.9
Q ss_pred CCCCCCEEEEecCCCCccchhHHHHHHHHcCCC----eEEEEcCCCCCCCC-----ccChHH
Q 024033 210 DKVETPCTIFQPSNDAVVPNSVAYYMQEKMKGK----STVEIIEADGHFPQ-----LTAHLQ 262 (273)
Q Consensus 210 ~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~----~~~~~i~~~gH~~~-----~e~p~~ 262 (273)
.++++|++++.|+.|..+|++....+.+.+... ++++++++.+|-.+ .+.||.
T Consensus 161 ~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped 222 (242)
T KOG3043|consen 161 ANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPED 222 (242)
T ss_pred hcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhH
Confidence 456799999999999999999888887777532 47999999999554 455643
No 154
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.03 E-value=3e-05 Score=71.75 Aligned_cols=96 Identities=18% Similarity=0.288 Sum_probs=55.6
Q ss_pred CceEEEecCCCCChhchhhhhhhhh-----------------cCceEEEEecCC-----CccccCCCCCCCCCCcccccH
Q 024033 21 KETLVLAHGFGGDQSIWDKITPVLS-----------------QHYRVLAFDWLF-----SGAILNKDHQSLYNPVKYSSY 78 (273)
Q Consensus 21 ~~~vvllHG~~~~~~~w~~~~~~L~-----------------~~~~via~D~~G-----~G~S~~~~~~~~~~~~~~~s~ 78 (273)
+-||+||+|.-|+-.-=+.++..-+ .+|+..+.|+-+ ||.+ -..-
T Consensus 89 GIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~tAm~G~~-------------l~dQ 155 (973)
T KOG3724|consen 89 GIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEFTAMHGHI-------------LLDQ 155 (973)
T ss_pred CceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchhhhhccHh-------------HHHH
Confidence 3589999998776544443332222 246777777643 2222 0113
Q ss_pred HHHHHHHHHHHHHc--C--------CCceEEEEEChhHHHHHHHHh---hCcccccceEEeecC
Q 024033 79 EAFADDLITLLEEN--D--------LKSTLFIGHSMSGMIGCIASV---KKPELFKRLILIGTS 129 (273)
Q Consensus 79 ~~~a~~l~~~~~~~--~--------~~~~~lvGhS~GG~ia~~~a~---~~p~~v~~lvl~~~~ 129 (273)
.+|+.|.+..+-.+ + ...++||||||||+||...+. ..++.|.-++..+++
T Consensus 156 tEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssP 219 (973)
T KOG3724|consen 156 TEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSP 219 (973)
T ss_pred HHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCc
Confidence 34444544433222 1 124999999999999876553 345667777777653
No 155
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=97.94 E-value=0.0025 Score=52.57 Aligned_cols=62 Identities=13% Similarity=0.137 Sum_probs=48.5
Q ss_pred CCCCCCEEEEecCCCCccchhHHHHHHHHcC--C-CeEEEEcCCCCCCC-CccChHHHHHHHHHhh
Q 024033 210 DKVETPCTIFQPSNDAVVPNSVAYYMQEKMK--G-KSTVEIIEADGHFP-QLTAHLQLIDVLNKVL 271 (273)
Q Consensus 210 ~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~--~-~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl 271 (273)
....+|-++++++.|.+++.+..++.++... + .++.+.+++++|.- +-++|++..+.+.+|+
T Consensus 175 ~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 175 SPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 3456999999999999999987666544332 1 26778889999965 4589999999999885
No 156
>COG3150 Predicted esterase [General function prediction only]
Probab=97.89 E-value=0.0001 Score=55.96 Aligned_cols=84 Identities=13% Similarity=0.256 Sum_probs=62.5
Q ss_pred EEEecCCCCChhchhh--hhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCCCceEEEE
Q 024033 24 LVLAHGFGGDQSIWDK--ITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDLKSTLFIG 101 (273)
Q Consensus 24 vvllHG~~~~~~~w~~--~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~~~~~lvG 101 (273)
||.||||-+++.+... +.+.+.++.+-+.+ | .|. .+. +....++.+..++..++.++..+||
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~~~~i~y-------~-~p~-------l~h-~p~~a~~ele~~i~~~~~~~p~ivG 65 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDEDVRDIEY-------S-TPH-------LPH-DPQQALKELEKAVQELGDESPLIVG 65 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhccccceee-------e-cCC-------CCC-CHHHHHHHHHHHHHHcCCCCceEEe
Confidence 7999999999888854 45556665554433 3 222 111 2778889999999999888899999
Q ss_pred EChhHHHHHHHHhhCcccccceEE
Q 024033 102 HSMSGMIGCIASVKKPELFKRLIL 125 (273)
Q Consensus 102 hS~GG~ia~~~a~~~p~~v~~lvl 125 (273)
-|+||+.|..++.++. ++++++
T Consensus 66 ssLGGY~At~l~~~~G--irav~~ 87 (191)
T COG3150 66 SSLGGYYATWLGFLCG--IRAVVF 87 (191)
T ss_pred ecchHHHHHHHHHHhC--Chhhhc
Confidence 9999999999999875 555543
No 157
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.81 E-value=8e-05 Score=52.96 Aligned_cols=60 Identities=18% Similarity=0.217 Sum_probs=51.9
Q ss_pred CCCCEEEEecCCCCccchhHHHHHHHHcCCCeEEEEcCCCCCCCCccChHHHHHHHHHhhc
Q 024033 212 VETPCTIFQPSNDAVVPNSVAYYMQEKMKGKSTVEIIEADGHFPQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 212 i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 272 (273)
-..|+|+|.++.|++.|.+.++.+++.+++ +.++.+++.||-.....-.-+.+++.+||.
T Consensus 33 ~~~piL~l~~~~Dp~TP~~~a~~~~~~l~~-s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~ 92 (103)
T PF08386_consen 33 GAPPILVLGGTHDPVTPYEGARAMAARLPG-SRLVTVDGAGHGVYAGGSPCVDKAVDDYLL 92 (103)
T ss_pred CCCCEEEEecCcCCCCcHHHHHHHHHHCCC-ceEEEEeccCcceecCCChHHHHHHHHHHH
Confidence 358999999999999999999999999996 589999999999986555567788888874
No 158
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.78 E-value=0.0001 Score=67.37 Aligned_cols=104 Identities=18% Similarity=0.159 Sum_probs=61.9
Q ss_pred CCceEEEecCCC---CChhchhhhhhhhh-c--CceEEEEecC----CCccccCCCCCCCCCCcccc--cHHHHHHHHHH
Q 024033 20 GKETLVLAHGFG---GDQSIWDKITPVLS-Q--HYRVLAFDWL----FSGAILNKDHQSLYNPVKYS--SYEAFADDLIT 87 (273)
Q Consensus 20 ~~~~vvllHG~~---~~~~~w~~~~~~L~-~--~~~via~D~~----G~G~S~~~~~~~~~~~~~~~--s~~~~a~~l~~ 87 (273)
..|.||++||-+ ++...+ ....|. . ++-|+++++| |+..+.... .+..+. +.....+.+.+
T Consensus 94 ~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~-----~~~n~g~~D~~~al~wv~~ 166 (493)
T cd00312 94 SLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIE-----LPGNYGLKDQRLALKWVQD 166 (493)
T ss_pred CCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCCC-----CCcchhHHHHHHHHHHHHH
Confidence 357899999932 222222 122232 2 3889999998 333331111 011111 13333334445
Q ss_pred HHHHcCC--CceEEEEEChhHHHHHHHHhh--CcccccceEEeecCC
Q 024033 88 LLEENDL--KSTLFIGHSMSGMIGCIASVK--KPELFKRLILIGTSP 130 (273)
Q Consensus 88 ~~~~~~~--~~~~lvGhS~GG~ia~~~a~~--~p~~v~~lvl~~~~~ 130 (273)
-++.+|. ++++|.|+|-||..++.++.. .+.+++++|+++...
T Consensus 167 ~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 167 NIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSA 213 (493)
T ss_pred HHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCc
Confidence 5566654 479999999999998887765 456799999988654
No 159
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.76 E-value=9.2e-05 Score=65.56 Aligned_cols=78 Identities=31% Similarity=0.539 Sum_probs=54.0
Q ss_pred chhhhhhhhhc-Cce----EE-E-EecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHc---CCCceEEEEEChh
Q 024033 36 IWDKITPVLSQ-HYR----VL-A-FDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEEN---DLKSTLFIGHSMS 105 (273)
Q Consensus 36 ~w~~~~~~L~~-~~~----vi-a-~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~---~~~~~~lvGhS~G 105 (273)
.|.++++.|.+ +|+ +. + +|+|=- + . ..+++...|.++++.. ..++++|||||||
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~-----~--------~---~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmG 129 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLS-----P--------A---ERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMG 129 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhc-----h--------h---hHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCC
Confidence 68999999988 554 22 2 455431 1 0 1345555555555432 3578999999999
Q ss_pred HHHHHHHHhhCcc------cccceEEeecC
Q 024033 106 GMIGCIASVKKPE------LFKRLILIGTS 129 (273)
Q Consensus 106 G~ia~~~a~~~p~------~v~~lvl~~~~ 129 (273)
|.++..+....+. .|+++|.++++
T Consensus 130 gl~~~~fl~~~~~~~W~~~~i~~~i~i~~p 159 (389)
T PF02450_consen 130 GLVARYFLQWMPQEEWKDKYIKRFISIGTP 159 (389)
T ss_pred chHHHHHHHhccchhhHHhhhhEEEEeCCC
Confidence 9999998887753 59999999875
No 160
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.75 E-value=0.00046 Score=58.04 Aligned_cols=68 Identities=22% Similarity=0.291 Sum_probs=48.7
Q ss_pred ccccccCCCC-CCEEEEecCCCCccchhHHHHHHHHcCC-CeEEEEcCCCCCCCCccChH---HHHHHHHHhh
Q 024033 204 DEREILDKVE-TPCTIFQPSNDAVVPNSVAYYMQEKMKG-KSTVEIIEADGHFPQLTAHL---QLIDVLNKVL 271 (273)
Q Consensus 204 ~~~~~l~~i~-~P~lii~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~---~~~~~i~~fl 271 (273)
+....+.++. +|+++++|..|..+|......+.+..++ ..+..++++++|......+. ...+.+.+|+
T Consensus 222 d~~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~ 294 (299)
T COG1073 222 DPFDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFL 294 (299)
T ss_pred cchhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHH
Confidence 3344455555 8999999999999999888877776654 34677889999988865544 3444555554
No 161
>COG0627 Predicted esterase [General function prediction only]
Probab=97.70 E-value=0.00017 Score=61.67 Aligned_cols=109 Identities=21% Similarity=0.219 Sum_probs=63.5
Q ss_pred CCceEEEecCCCCChhchhh--hhhhhh-c-CceEEEEec--------------CCCccccCCCCCCC-CCCcccccHHH
Q 024033 20 GKETLVLAHGFGGDQSIWDK--ITPVLS-Q-HYRVLAFDW--------------LFSGAILNKDHQSL-YNPVKYSSYEA 80 (273)
Q Consensus 20 ~~~~vvllHG~~~~~~~w~~--~~~~L~-~-~~~via~D~--------------~G~G~S~~~~~~~~-~~~~~~~s~~~ 80 (273)
.-|+++++||..++...|.. =++... + ++.++++|- .|-|.|=..+.... ....+|. ++.
T Consensus 53 ~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q-~~t 131 (316)
T COG0627 53 DIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQ-WET 131 (316)
T ss_pred CCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccc-hhH
Confidence 34678999999888655522 223333 2 455666532 23333200010000 0001133 433
Q ss_pred -HHHHHHHHHHH-cCC----CceEEEEEChhHHHHHHHHhhCcccccceEEeecC
Q 024033 81 -FADDLITLLEE-NDL----KSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTS 129 (273)
Q Consensus 81 -~a~~l~~~~~~-~~~----~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~ 129 (273)
++++|-..+++ +.. ++..++||||||.-|+.+|+++|++++.+..+++.
T Consensus 132 fl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~ 186 (316)
T COG0627 132 FLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGI 186 (316)
T ss_pred HHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccc
Confidence 34556645543 321 26889999999999999999999999998888764
No 162
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=97.68 E-value=0.00012 Score=66.49 Aligned_cols=109 Identities=18% Similarity=0.128 Sum_probs=76.4
Q ss_pred cCCCceEEEecCCCC-----Chhchhhh--hhhhhc-CceEEEEecCCCccccCCCCCCCC-CCcccccHHHHHHHHHHH
Q 024033 18 GSGKETLVLAHGFGG-----DQSIWDKI--TPVLSQ-HYRVLAFDWLFSGAILNKDHQSLY-NPVKYSSYEAFADDLITL 88 (273)
Q Consensus 18 G~~~~~vvllHG~~~-----~~~~w~~~--~~~L~~-~~~via~D~~G~G~S~~~~~~~~~-~~~~~~s~~~~a~~l~~~ 88 (273)
|+.-|+++++-|-++ |...|... ...|+. +|-|+.+|-||.-.. .....+.. ....+-.+++.++.+.-+
T Consensus 639 gkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hR-GlkFE~~ik~kmGqVE~eDQVeglq~L 717 (867)
T KOG2281|consen 639 GKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHR-GLKFESHIKKKMGQVEVEDQVEGLQML 717 (867)
T ss_pred CCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCcccc-chhhHHHHhhccCeeeehhhHHHHHHH
Confidence 444578999999765 55556433 345666 899999999996543 11100000 011122388999999999
Q ss_pred HHHcC---CCceEEEEEChhHHHHHHHHhhCcccccceEEee
Q 024033 89 LEEND---LKSTLFIGHSMSGMIGCIASVKKPELFKRLILIG 127 (273)
Q Consensus 89 ~~~~~---~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~ 127 (273)
.++.| .+++.+-|||.||++++...+++|+-++..|.-+
T Consensus 718 aeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGa 759 (867)
T KOG2281|consen 718 AEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGA 759 (867)
T ss_pred HHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccC
Confidence 98874 5789999999999999999999999887766543
No 163
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.68 E-value=9.2e-05 Score=56.64 Aligned_cols=52 Identities=19% Similarity=0.296 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHc----CCCceEEEEEChhHHHHHHHHhhCcc----cccceEEeecC
Q 024033 78 YEAFADDLITLLEEN----DLKSTLFIGHSMSGMIGCIASVKKPE----LFKRLILIGTS 129 (273)
Q Consensus 78 ~~~~a~~l~~~~~~~----~~~~~~lvGhS~GG~ia~~~a~~~p~----~v~~lvl~~~~ 129 (273)
+..+.+.+...+++. ...+++++||||||.+|..++...+. ....++.++++
T Consensus 7 ~~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p 66 (153)
T cd00741 7 ARSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPP 66 (153)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCC
Confidence 444555555555443 56789999999999999998887765 46667777654
No 164
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.67 E-value=0.00027 Score=60.36 Aligned_cols=90 Identities=26% Similarity=0.406 Sum_probs=56.2
Q ss_pred CCCceEEEecCCCCC--hhchh--hhhhhhhcCceEEEEecCCCccccCCCCCCCCCC--cccccHHHHHHHHHHHHHHc
Q 024033 19 SGKETLVLAHGFGGD--QSIWD--KITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNP--VKYSSYEAFADDLITLLEEN 92 (273)
Q Consensus 19 ~~~~~vvllHG~~~~--~~~w~--~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~--~~~~s~~~~a~~l~~~~~~~ 92 (273)
.++..+||+||+.-+ ...++ .+...+.....++.+-||-.|.--.-. +|. ..|+ -+++...|..+.+..
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn----~DreS~~~S-r~aLe~~lr~La~~~ 188 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYN----YDRESTNYS-RPALERLLRYLATDK 188 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecc----cchhhhhhh-HHHHHHHHHHHHhCC
Confidence 345689999998754 23332 233334446788899998877531101 111 1232 555555555566666
Q ss_pred CCCceEEEEEChhHHHHHHHH
Q 024033 93 DLKSTLFIGHSMSGMIGCIAS 113 (273)
Q Consensus 93 ~~~~~~lvGhS~GG~ia~~~a 113 (273)
..++++|++||||..+.+...
T Consensus 189 ~~~~I~ilAHSMGtwl~~e~L 209 (377)
T COG4782 189 PVKRIYLLAHSMGTWLLMEAL 209 (377)
T ss_pred CCceEEEEEecchHHHHHHHH
Confidence 778899999999999987644
No 165
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=97.63 E-value=0.0003 Score=55.04 Aligned_cols=95 Identities=21% Similarity=0.186 Sum_probs=65.9
Q ss_pred eEEEecCCCCChhchhhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHH----cCCCce
Q 024033 23 TLVLAHGFGGDQSIWDKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEE----NDLKST 97 (273)
Q Consensus 23 ~vvllHG~~~~~~~w~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~----~~~~~~ 97 (273)
-+||+-|=++=...=..+...|++ ++.|+.+|-+=|=.+. .|.++.+.|+..+++. .+.+++
T Consensus 4 ~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~-------------rtP~~~a~Dl~~~i~~y~~~w~~~~v 70 (192)
T PF06057_consen 4 LAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSE-------------RTPEQTAADLARIIRHYRARWGRKRV 70 (192)
T ss_pred EEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhh-------------CCHHHHHHHHHHHHHHHHHHhCCceE
Confidence 467776654422222557788888 8999999976665551 1356666666666654 578899
Q ss_pred EEEEEChhHHHHHHHHhhCc----ccccceEEeecCC
Q 024033 98 LFIGHSMSGMIGCIASVKKP----ELFKRLILIGTSP 130 (273)
Q Consensus 98 ~lvGhS~GG~ia~~~a~~~p----~~v~~lvl~~~~~ 130 (273)
+|||.|+|+-|.-....+-| ++|+.++++++..
T Consensus 71 vLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 71 VLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPST 107 (192)
T ss_pred EEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccCC
Confidence 99999999988766665555 4778888887643
No 166
>COG4099 Predicted peptidase [General function prediction only]
Probab=97.61 E-value=0.00038 Score=57.82 Aligned_cols=49 Identities=20% Similarity=0.258 Sum_probs=38.3
Q ss_pred HHHHHHH-HHHHHcCC--CceEEEEEChhHHHHHHHHhhCcccccceEEeec
Q 024033 80 AFADDLI-TLLEENDL--KSTLFIGHSMSGMIGCIASVKKPELFKRLILIGT 128 (273)
Q Consensus 80 ~~a~~l~-~~~~~~~~--~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~ 128 (273)
...+.+. .+.++..+ +++.++|.|+||+-++.++.++|+.+++.++++.
T Consensus 251 ~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG 302 (387)
T COG4099 251 EKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAG 302 (387)
T ss_pred HHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecC
Confidence 3344444 23344555 4699999999999999999999999999999875
No 167
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=97.58 E-value=0.0021 Score=58.55 Aligned_cols=120 Identities=18% Similarity=0.124 Sum_probs=76.7
Q ss_pred ccccccccccceEEe-------cCC-CceEEEecCCCCChh---ch--hhhhh---hh-hcCceEEEEecCCCccccCCC
Q 024033 3 IREQGLSAAMNAKII-------GSG-KETLVLAHGFGGDQS---IW--DKITP---VL-SQHYRVLAFDWLFSGAILNKD 65 (273)
Q Consensus 3 ~~~~~~~~~~~~~~~-------G~~-~~~vvllHG~~~~~~---~w--~~~~~---~L-~~~~~via~D~~G~G~S~~~~ 65 (273)
-++..+.++-+++++ +.+ .|+++..+-++.... .+ ....+ .+ +.+|.||..|.||.|.|+ ..
T Consensus 19 ~~~v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~Se-G~ 97 (563)
T COG2936 19 ERDVMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSE-GV 97 (563)
T ss_pred eeeeeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCC-cc
Confidence 344556666666654 222 466677773444333 22 12233 33 448999999999999994 32
Q ss_pred CCCCCCCccccc-HHHHHHHHHHHHHHcCC--CceEEEEEChhHHHHHHHHhhCcccccceEEeecC
Q 024033 66 HQSLYNPVKYSS-YEAFADDLITLLEENDL--KSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTS 129 (273)
Q Consensus 66 ~~~~~~~~~~~s-~~~~a~~l~~~~~~~~~--~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~ 129 (273)
++ .+.+ -.+-..|+++.+.+... .++-.+|-|++|...+++|+..|.-+++++...+.
T Consensus 98 ----~~--~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~ 158 (563)
T COG2936 98 ----FD--PESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGL 158 (563)
T ss_pred ----cc--eeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccc
Confidence 11 1111 22234567777776543 47999999999999999999888888888876654
No 168
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.58 E-value=0.00019 Score=53.88 Aligned_cols=40 Identities=28% Similarity=0.459 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHcCCCceEEEEEChhHHHHHHHHhhCc
Q 024033 78 YEAFADDLITLLEENDLKSTLFIGHSMSGMIGCIASVKKP 117 (273)
Q Consensus 78 ~~~~a~~l~~~~~~~~~~~~~lvGhS~GG~ia~~~a~~~p 117 (273)
.+.+.+.+.+++++....++++.|||+||.+|..+++...
T Consensus 47 ~~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~ 86 (140)
T PF01764_consen 47 YDQILDALKELVEKYPDYSIVITGHSLGGALASLAAADLA 86 (140)
T ss_dssp HHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhhh
Confidence 4456677777777766667999999999999998887543
No 169
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.58 E-value=0.0013 Score=56.40 Aligned_cols=108 Identities=18% Similarity=0.227 Sum_probs=69.0
Q ss_pred CceEEEecCCCCCh---hchhhhhhhhhc-CceEEEEecCC--Ccccc-----------CCCCC-CCC-CCc--------
Q 024033 21 KETLVLAHGFGGDQ---SIWDKITPVLSQ-HYRVLAFDWLF--SGAIL-----------NKDHQ-SLY-NPV-------- 73 (273)
Q Consensus 21 ~~~vvllHG~~~~~---~~w~~~~~~L~~-~~~via~D~~G--~G~S~-----------~~~~~-~~~-~~~-------- 73 (273)
...||+|||++.++ ..-.++...|.+ +|..+++-+|. -..+. .+... +.. +..
T Consensus 87 ~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 166 (310)
T PF12048_consen 87 QGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEA 166 (310)
T ss_pred ceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHh
Confidence 34799999999875 334677777888 89999988877 11100 00000 000 000
Q ss_pred ----cc-ccHHHHHHHHHHHHHHcCCCceEEEEEChhHHHHHHHHhhCcc-cccceEEeec
Q 024033 74 ----KY-SSYEAFADDLITLLEENDLKSTLFIGHSMSGMIGCIASVKKPE-LFKRLILIGT 128 (273)
Q Consensus 74 ----~~-~s~~~~a~~l~~~~~~~~~~~~~lvGhS~GG~ia~~~a~~~p~-~v~~lvl~~~ 128 (273)
.| ..+....+.+.+++...+.++++||||+.|+..+..+....+. .+.++|++++
T Consensus 167 ~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a 227 (310)
T PF12048_consen 167 EAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINA 227 (310)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeC
Confidence 00 0122334444455556677779999999999999988887764 5899999986
No 170
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.57 E-value=0.0013 Score=59.61 Aligned_cols=50 Identities=18% Similarity=0.243 Sum_probs=41.8
Q ss_pred CCCCCCEEEEecCCCCccchhHHHHHHHHcCCCeEEEEcCCCCCCCCccC
Q 024033 210 DKVETPCTIFQPSNDAVVPNSVAYYMQEKMKGKSTVEIIEADGHFPQLTA 259 (273)
Q Consensus 210 ~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~ 259 (273)
-.++.|+|||.|.+|..++++..+.+.++...-.++++|.+++|..-.-.
T Consensus 301 ldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsmaipk 350 (784)
T KOG3253|consen 301 LDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAIPK 350 (784)
T ss_pred HhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccccCCc
Confidence 34578999999999999999999998888764468999999999875533
No 171
>PLN02606 palmitoyl-protein thioesterase
Probab=97.56 E-value=0.0008 Score=56.58 Aligned_cols=98 Identities=17% Similarity=0.195 Sum_probs=66.5
Q ss_pred CceEEEecCCC--CChhchhhhhhhhhc--CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcC-C-
Q 024033 21 KETLVLAHGFG--GDQSIWDKITPVLSQ--HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEEND-L- 94 (273)
Q Consensus 21 ~~~vvllHG~~--~~~~~w~~~~~~L~~--~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~-~- 94 (273)
..|||+.||++ ++......+...+.+ +.-++.+- .|-|.. . +. +.+..+.++.+++.+.... +
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~---~--s~-----~~~~~~Qv~~vce~l~~~~~L~ 94 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQ---D--SL-----FMPLRQQASIACEKIKQMKELS 94 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCcc---c--cc-----ccCHHHHHHHHHHHHhcchhhc
Confidence 35799999999 555677777777762 33333333 332221 0 11 1346666777666665421 1
Q ss_pred CceEEEEEChhHHHHHHHHhhCcc--cccceEEeecC
Q 024033 95 KSTLFIGHSMSGMIGCIASVKKPE--LFKRLILIGTS 129 (273)
Q Consensus 95 ~~~~lvGhS~GG~ia~~~a~~~p~--~v~~lvl~~~~ 129 (273)
+-+++||+|=||.+.-.++.++|+ .|+.+|.+++.
T Consensus 95 ~G~naIGfSQGglflRa~ierc~~~p~V~nlISlggp 131 (306)
T PLN02606 95 EGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGP 131 (306)
T ss_pred CceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCC
Confidence 349999999999999999999987 59999999875
No 172
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.44 E-value=0.0014 Score=53.72 Aligned_cols=97 Identities=18% Similarity=0.187 Sum_probs=70.6
Q ss_pred ceEEEecCCCCChhc--hhhhhhhhhc--CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcC-C-C
Q 024033 22 ETLVLAHGFGGDQSI--WDKITPVLSQ--HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEEND-L-K 95 (273)
Q Consensus 22 ~~vvllHG~~~~~~~--w~~~~~~L~~--~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~-~-~ 95 (273)
.|+|++||+++.... ...+.+.+.+ +..|+++|. |-|-- + ..+....+.++.+++.+.... + +
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g~~---~-------s~l~pl~~Qv~~~ce~v~~m~~lsq 92 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDGIK---D-------SSLMPLWEQVDVACEKVKQMPELSQ 92 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCCcc---h-------hhhccHHHHHHHHHHHHhcchhccC
Confidence 479999999987766 6778888877 577888886 54511 0 012237777777777776442 2 3
Q ss_pred ceEEEEEChhHHHHHHHHhhCcc-cccceEEeecC
Q 024033 96 STLFIGHSMSGMIGCIASVKKPE-LFKRLILIGTS 129 (273)
Q Consensus 96 ~~~lvGhS~GG~ia~~~a~~~p~-~v~~lvl~~~~ 129 (273)
-++++|.|=||+++-.++...|+ .|+.+|.++++
T Consensus 93 Gynivg~SQGglv~Raliq~cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 93 GYNIVGYSQGGLVARALIQFCDNPPVKNFISLGGP 127 (296)
T ss_pred ceEEEEEccccHHHHHHHHhCCCCCcceeEeccCC
Confidence 49999999999999888876554 68888988864
No 173
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.44 E-value=0.0029 Score=51.80 Aligned_cols=54 Identities=24% Similarity=0.299 Sum_probs=44.4
Q ss_pred EEEEecCCCCccchhHHHHHHHHcCCCeEEEEcCCCCCC-CCccChHHHHHHHHHhh
Q 024033 216 CTIFQPSNDAVVPNSVAYYMQEKMKGKSTVEIIEADGHF-PQLTAHLQLIDVLNKVL 271 (273)
Q Consensus 216 ~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~-~~~e~p~~~~~~i~~fl 271 (273)
+.++.+++|..+|......+.+..|+ +++..++ .||. ..+-+.+.+...|.+-|
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg-~eVr~~e-gGHVsayl~k~dlfRR~I~d~L 363 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPG-CEVRYLE-GGHVSAYLFKQDLFRRAIVDGL 363 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCC-CEEEEee-cCceeeeehhchHHHHHHHHHH
Confidence 57789999999999888899999997 5899888 7894 46677788888877654
No 174
>KOG3101 consensus Esterase D [General function prediction only]
Probab=97.39 E-value=0.00027 Score=55.81 Aligned_cols=108 Identities=22% Similarity=0.270 Sum_probs=69.5
Q ss_pred CCceEEEecCCCCChhchhh---hhhhhhc-CceEEEEecCCCccccCCCCCCCCC--------------Cc--ccccHH
Q 024033 20 GKETLVLAHGFGGDQSIWDK---ITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYN--------------PV--KYSSYE 79 (273)
Q Consensus 20 ~~~~vvllHG~~~~~~~w~~---~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~--------------~~--~~~s~~ 79 (273)
..|+|.+|-|++++...|.. ....-++ +.-|++||----|..-..+.++ ++ ++ .|.=++
T Consensus 43 ~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~es-wDFG~GAGFYvnAt~epw~~~yrMYd 121 (283)
T KOG3101|consen 43 RCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDES-WDFGQGAGFYVNATQEPWAKHYRMYD 121 (283)
T ss_pred cCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCccc-ccccCCceeEEecccchHhhhhhHHH
Confidence 35789999999998888733 2233333 5789999975444321111110 10 00 133234
Q ss_pred HHHHHHHHHHHH----cCCCceEEEEEChhHHHHHHHHhhCcccccceEEeec
Q 024033 80 AFADDLITLLEE----NDLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGT 128 (273)
Q Consensus 80 ~~a~~l~~~~~~----~~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~ 128 (273)
-.+++|.+++.. ++..++.+.||||||.=|+..++++|++.+++-..++
T Consensus 122 Yv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAP 174 (283)
T KOG3101|consen 122 YVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAP 174 (283)
T ss_pred HHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceecccc
Confidence 445667777763 3445789999999999999999999999888765544
No 175
>PLN02633 palmitoyl protein thioesterase family protein
Probab=97.36 E-value=0.0014 Score=55.27 Aligned_cols=98 Identities=13% Similarity=0.088 Sum_probs=63.3
Q ss_pred CceEEEecCCCCChhc--hhhhhhhhhc--CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcC-C-
Q 024033 21 KETLVLAHGFGGDQSI--WDKITPVLSQ--HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEEND-L- 94 (273)
Q Consensus 21 ~~~vvllHG~~~~~~~--w~~~~~~L~~--~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~-~- 94 (273)
..|+|+.||+|++... -..+.+.+.+ +.-++++.. |-+.. .+. +.++.+.++.+++.+.... +
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i-g~~~~-----~s~-----~~~~~~Qve~vce~l~~~~~l~ 93 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI-GNGVG-----DSW-----LMPLTQQAEIACEKVKQMKELS 93 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE-CCCcc-----ccc-----eeCHHHHHHHHHHHHhhchhhh
Confidence 3579999999987543 2333333332 234444433 32211 111 2246666777766665421 1
Q ss_pred CceEEEEEChhHHHHHHHHhhCcc--cccceEEeecC
Q 024033 95 KSTLFIGHSMSGMIGCIASVKKPE--LFKRLILIGTS 129 (273)
Q Consensus 95 ~~~~lvGhS~GG~ia~~~a~~~p~--~v~~lvl~~~~ 129 (273)
+-+++||+|=||.++-.++.+.|+ .|+.+|.+++.
T Consensus 94 ~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggp 130 (314)
T PLN02633 94 QGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGP 130 (314)
T ss_pred CcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCC
Confidence 349999999999999999999997 59999999874
No 176
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.33 E-value=0.00068 Score=56.47 Aligned_cols=102 Identities=16% Similarity=0.186 Sum_probs=59.2
Q ss_pred CceEEEecCCCCC---hhchhhhhhhhhc---CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcC-
Q 024033 21 KETLVLAHGFGGD---QSIWDKITPVLSQ---HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEEND- 93 (273)
Q Consensus 21 ~~~vvllHG~~~~---~~~w~~~~~~L~~---~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~- 93 (273)
..|||+.||+|++ +..+..+...+.+ +--|+++++ |-+.+++-. ..-+.++.+.++.+++.++...
T Consensus 5 ~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~i-g~~~~~D~~------~s~f~~v~~Qv~~vc~~l~~~p~ 77 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEI-GNDPSEDVE------NSFFGNVNDQVEQVCEQLANDPE 77 (279)
T ss_dssp S--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--S-SSSHHHHHH------HHHHSHHHHHHHHHHHHHHH-GG
T ss_pred CCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEE-CCCcchhhh------hhHHHHHHHHHHHHHHHHhhChh
Confidence 3589999999975 3456666555544 445777765 433321100 0012357888888888887532
Q ss_pred C-CceEEEEEChhHHHHHHHHhhCcc-cccceEEeecC
Q 024033 94 L-KSTLFIGHSMSGMIGCIASVKKPE-LFKRLILIGTS 129 (273)
Q Consensus 94 ~-~~~~lvGhS~GG~ia~~~a~~~p~-~v~~lvl~~~~ 129 (273)
+ +-+++||+|=||.+.-.++.++|+ .|+.+|.+++.
T Consensus 78 L~~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggp 115 (279)
T PF02089_consen 78 LANGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGP 115 (279)
T ss_dssp GTT-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred hhcceeeeeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence 1 359999999999999999999875 69999999874
No 177
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.32 E-value=0.0049 Score=49.25 Aligned_cols=97 Identities=20% Similarity=0.197 Sum_probs=67.2
Q ss_pred ceEEEecCCCCChh--ch-hhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCC---
Q 024033 22 ETLVLAHGFGGDQS--IW-DKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDL--- 94 (273)
Q Consensus 22 ~~vvllHG~~~~~~--~w-~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~--- 94 (273)
-.||||-|+++.-- .+ .++..+|.+ .|.++-+.++-+-. .+ ...|+++-++|+..++++++.
T Consensus 37 ~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~--------G~---Gt~slk~D~edl~~l~~Hi~~~~f 105 (299)
T KOG4840|consen 37 VKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYN--------GY---GTFSLKDDVEDLKCLLEHIQLCGF 105 (299)
T ss_pred EEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecccccc--------cc---ccccccccHHHHHHHHHHhhccCc
Confidence 36899999987532 22 556667766 79888887754211 01 012477789999999998754
Q ss_pred -CceEEEEEChhHHHHHHHH--hhCcccccceEEeecC
Q 024033 95 -KSTLFIGHSMSGMIGCIAS--VKKPELFKRLILIGTS 129 (273)
Q Consensus 95 -~~~~lvGhS~GG~ia~~~a--~~~p~~v~~lvl~~~~ 129 (273)
.+++|+|||.|.-=.+++. ...|..+.+.|+.++.
T Consensus 106 St~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApV 143 (299)
T KOG4840|consen 106 STDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPV 143 (299)
T ss_pred ccceEEEecCccchHHHHHHHhccchHHHHHHHHhCcc
Confidence 2799999999998777666 3456677777776653
No 178
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=97.27 E-value=0.00036 Score=58.34 Aligned_cols=40 Identities=23% Similarity=0.429 Sum_probs=35.2
Q ss_pred CceEEEecCCCCChhchhhhhhhhhc-CceEEEEecCCCcc
Q 024033 21 KETLVLAHGFGGDQSIWDKITPVLSQ-HYRVLAFDWLFSGA 60 (273)
Q Consensus 21 ~~~vvllHG~~~~~~~w~~~~~~L~~-~~~via~D~~G~G~ 60 (273)
-|.|||-||++++...|+...-.|+. +|-|.|+..|-+--
T Consensus 118 ~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA 158 (399)
T KOG3847|consen 118 YPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSA 158 (399)
T ss_pred ccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcc
Confidence 47899999999999999999999998 68899999987653
No 179
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.16 E-value=0.0027 Score=55.42 Aligned_cols=33 Identities=24% Similarity=0.439 Sum_probs=29.3
Q ss_pred ceEEEEEChhHHHHHHHHhhCcccccceEEeec
Q 024033 96 STLFIGHSMSGMIGCIASVKKPELFKRLILIGT 128 (273)
Q Consensus 96 ~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~ 128 (273)
+++++|+|.||.+|...|.-.|-.|.+++=-++
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~ 217 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSS 217 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCc
Confidence 799999999999999999999999988775444
No 180
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.06 E-value=0.0013 Score=53.89 Aligned_cols=29 Identities=17% Similarity=0.341 Sum_probs=22.0
Q ss_pred HHHHcCCCceEEEEEChhHHHHHHHHhhC
Q 024033 88 LLEENDLKSTLFIGHSMSGMIGCIASVKK 116 (273)
Q Consensus 88 ~~~~~~~~~~~lvGhS~GG~ia~~~a~~~ 116 (273)
.+++....++++.||||||.+|..++...
T Consensus 121 ~~~~~p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 121 ALKQYPDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred HHhhCCCceEEEEccCHHHHHHHHHHHHH
Confidence 33333456799999999999999888753
No 181
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.05 E-value=0.0016 Score=53.03 Aligned_cols=44 Identities=14% Similarity=0.169 Sum_probs=33.5
Q ss_pred HHHHHHHcCCCceEEEEEChhHHHHHHHHhhC----cccccceEEeecC
Q 024033 85 LITLLEENDLKSTLFIGHSMSGMIGCIASVKK----PELFKRLILIGTS 129 (273)
Q Consensus 85 l~~~~~~~~~~~~~lvGhS~GG~ia~~~a~~~----p~~v~~lvl~~~~ 129 (273)
+..+++..+. ++++.|||+||.+|+++|+.. .++|.++...+++
T Consensus 75 l~~~~~~~~~-~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgP 122 (224)
T PF11187_consen 75 LKKIAKKYPG-KIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGP 122 (224)
T ss_pred HHHHHHhCCC-CEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCC
Confidence 4445555443 599999999999999999874 3578888888874
No 182
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.05 E-value=0.0013 Score=59.95 Aligned_cols=87 Identities=15% Similarity=0.114 Sum_probs=51.7
Q ss_pred hchhhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHH----cCCCceEEEEEChhHHHH
Q 024033 35 SIWDKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEE----NDLKSTLFIGHSMSGMIG 109 (273)
Q Consensus 35 ~~w~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~----~~~~~~~lvGhS~GG~ia 109 (273)
..|.++++.|.+ +|. --|+.|..+- .+ +.......-+.+-..|..+++. .+.+|++||||||||.++
T Consensus 156 ~vw~kLIe~L~~iGY~--~~nL~gAPYD----WR--ls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~ 227 (642)
T PLN02517 156 FVWAVLIANLARIGYE--EKNMYMAAYD----WR--LSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYF 227 (642)
T ss_pred eeHHHHHHHHHHcCCC--CCceeecccc----cc--cCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHH
Confidence 467999999998 776 3444443221 00 0000000123444444444443 346799999999999999
Q ss_pred HHHHhhCc---------------ccccceEEeecC
Q 024033 110 CIASVKKP---------------ELFKRLILIGTS 129 (273)
Q Consensus 110 ~~~a~~~p---------------~~v~~lvl~~~~ 129 (273)
+.+...-. ..|++.|.++++
T Consensus 228 lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp 262 (642)
T PLN02517 228 LHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGP 262 (642)
T ss_pred HHHHHhccccccccCCcchHHHHHHHHHheecccc
Confidence 98765321 356788888763
No 183
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.01 E-value=0.0031 Score=54.82 Aligned_cols=110 Identities=19% Similarity=0.265 Sum_probs=71.9
Q ss_pred cCCCceEEEecCCCCChhchhh-------hhhhhhcCceEEEEecCCCccccCCCCCCCCCC--cccccHHHHHHHHHHH
Q 024033 18 GSGKETLVLAHGFGGDQSIWDK-------ITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNP--VKYSSYEAFADDLITL 88 (273)
Q Consensus 18 G~~~~~vvllHG~~~~~~~w~~-------~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~--~~~~s~~~~a~~l~~~ 88 (273)
+++..||+|--|.-++-+.|.. +.+.|. .-+|...+|=||+|-.-..++..+. ..|.|-+.-.+|..++
T Consensus 77 ~~g~gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~--AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~l 154 (492)
T KOG2183|consen 77 KKGEGPIFFYTGNEGDIEWFANNTGFMWDLAPELK--ALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAEL 154 (492)
T ss_pred cCCCCceEEEeCCcccHHHHHhccchHHhhhHhhC--ceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHH
Confidence 3443479999998776555433 333333 4588999999999932111111111 1254555555555555
Q ss_pred HHHcC------CCceEEEEEChhHHHHHHHHhhCcccccceEEeecC
Q 024033 89 LEEND------LKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTS 129 (273)
Q Consensus 89 ~~~~~------~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~ 129 (273)
+..+. ..+++.+|-|.|||+|..+=.+||..|.+.+.-+++
T Consensus 155 l~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAP 201 (492)
T KOG2183|consen 155 LTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAP 201 (492)
T ss_pred HHHHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCc
Confidence 55542 247999999999999999999999999887765553
No 184
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.97 E-value=0.0015 Score=53.79 Aligned_cols=48 Identities=31% Similarity=0.473 Sum_probs=38.3
Q ss_pred HHHHHHHHH-c--CCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCC
Q 024033 83 DDLITLLEE-N--DLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSP 130 (273)
Q Consensus 83 ~~l~~~~~~-~--~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (273)
+++.-++++ . +-++-.++|||+||.+++...+++|+.+...++++++.
T Consensus 122 ~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 122 EQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred HhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 334445554 2 34568999999999999999999999999999998764
No 185
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=96.87 E-value=0.0014 Score=54.79 Aligned_cols=104 Identities=18% Similarity=0.313 Sum_probs=61.1
Q ss_pred CceEEEecC--CCCChhchhhhhhhhhcC----ceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHc--
Q 024033 21 KETLVLAHG--FGGDQSIWDKITPVLSQH----YRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEEN-- 92 (273)
Q Consensus 21 ~~~vvllHG--~~~~~~~w~~~~~~L~~~----~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~-- 92 (273)
-|.+++.|| |..+...|+-+-..+.++ --+|.+|. ....+-. ....... .....++++|.=++++.
T Consensus 98 ~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~---~d~~~R~-~~~~~n~--~~~~~L~~eLlP~v~~~yp 171 (299)
T COG2382 98 YPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDY---IDVKKRR-EELHCNE--AYWRFLAQELLPYVEERYP 171 (299)
T ss_pred ccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCC---CCHHHHH-HHhcccH--HHHHHHHHHhhhhhhccCc
Confidence 467899999 344555565555555553 23444442 1110000 0000001 11445555555555542
Q ss_pred ---CCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCC
Q 024033 93 ---DLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSP 130 (273)
Q Consensus 93 ---~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (273)
.-+.-+|.|.|+||.+++..+.+||++|..++..+++.
T Consensus 172 ~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~ 212 (299)
T COG2382 172 TSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSF 212 (299)
T ss_pred ccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCcc
Confidence 22357899999999999999999999999888876643
No 186
>PLN02162 triacylglycerol lipase
Probab=96.77 E-value=0.0037 Score=55.57 Aligned_cols=37 Identities=22% Similarity=0.345 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHcCCCceEEEEEChhHHHHHHHHh
Q 024033 78 YEAFADDLITLLEENDLKSTLFIGHSMSGMIGCIASV 114 (273)
Q Consensus 78 ~~~~a~~l~~~~~~~~~~~~~lvGhS~GG~ia~~~a~ 114 (273)
+..+-+.+.+++++....++++.|||+||.+|..+|+
T Consensus 261 y~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 261 YYTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 4455666777777766567999999999999988764
No 187
>PLN00413 triacylglycerol lipase
Probab=96.73 E-value=0.0043 Score=55.30 Aligned_cols=37 Identities=19% Similarity=0.430 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHcCCCceEEEEEChhHHHHHHHHh
Q 024033 78 YEAFADDLITLLEENDLKSTLFIGHSMSGMIGCIASV 114 (273)
Q Consensus 78 ~~~~a~~l~~~~~~~~~~~~~lvGhS~GG~ia~~~a~ 114 (273)
+..+.+.+.++++.....++++.|||+||++|..+|.
T Consensus 267 yy~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 267 YYTILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 3456677888888777678999999999999988874
No 188
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.70 E-value=0.018 Score=45.78 Aligned_cols=102 Identities=21% Similarity=0.276 Sum_probs=62.2
Q ss_pred CceEEEecCCCC-Chhchh-h-----------hhhh----hhcCceEEEEecC---CCccccCCCCCCCCCCccc--ccH
Q 024033 21 KETLVLAHGFGG-DQSIWD-K-----------ITPV----LSQHYRVLAFDWL---FSGAILNKDHQSLYNPVKY--SSY 78 (273)
Q Consensus 21 ~~~vvllHG~~~-~~~~w~-~-----------~~~~----L~~~~~via~D~~---G~G~S~~~~~~~~~~~~~~--~s~ 78 (273)
+..+|||||-|- .+.-|. . ++|+ .+.+|.|+...-- -+-.+ + .++..| +..
T Consensus 101 ~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~-k------~np~kyirt~v 173 (297)
T KOG3967|consen 101 QKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEK-K------RNPQKYIRTPV 173 (297)
T ss_pred cceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhc-c------cCcchhccchH
Confidence 447899999875 456663 2 2333 3457888887542 11111 0 111122 123
Q ss_pred HHHHHHHHHHHHHcCCCceEEEEEChhHHHHHHHHhhCcc--cccceEEeecC
Q 024033 79 EAFADDLITLLEENDLKSTLFIGHSMSGMIGCIASVKKPE--LFKRLILIGTS 129 (273)
Q Consensus 79 ~~~a~~l~~~~~~~~~~~~~lvGhS~GG~ia~~~a~~~p~--~v~~lvl~~~~ 129 (273)
+..--....++.-...+.+.++.||.||...+.+..++|+ +|.++.+.+++
T Consensus 174 eh~~yvw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 174 EHAKYVWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred HHHHHHHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 3333334445554556789999999999999999999985 66677766654
No 189
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=96.63 E-value=0.027 Score=50.18 Aligned_cols=115 Identities=16% Similarity=0.136 Sum_probs=71.1
Q ss_pred cccceEEec-----CCCceEEEecCCCCChhchhhh---hhh----------------hhcCceEEEEe-cCCCccccCC
Q 024033 10 AAMNAKIIG-----SGKETLVLAHGFGGDQSIWDKI---TPV----------------LSQHYRVLAFD-WLFSGAILNK 64 (273)
Q Consensus 10 ~~~~~~~~G-----~~~~~vvllHG~~~~~~~w~~~---~~~----------------L~~~~~via~D-~~G~G~S~~~ 64 (273)
..++|..+. +..|.||.+.|-+++++.|-.+ .|. +.+..+++-+| ..|-|.|-..
T Consensus 24 ~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~PvGtGfS~~~ 103 (415)
T PF00450_consen 24 AHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFIDQPVGTGFSYGN 103 (415)
T ss_dssp EEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE--STTSTT-EES
T ss_pred cEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccccceEEEeecCceEEeecc
Confidence 456666553 2457899999999998888433 221 23346899999 5599999322
Q ss_pred CCCCCCCCcccccHHHHHHHHHHHHHHc-------CCCceEEEEEChhHHHHHHHHh----hC------cccccceEEee
Q 024033 65 DHQSLYNPVKYSSYEAFADDLITLLEEN-------DLKSTLFIGHSMSGMIGCIASV----KK------PELFKRLILIG 127 (273)
Q Consensus 65 ~~~~~~~~~~~~s~~~~a~~l~~~~~~~-------~~~~~~lvGhS~GG~ia~~~a~----~~------p~~v~~lvl~~ 127 (273)
. . .....+.++.|+++.++|..+ .-.+++|.|-|+||.-+-.+|. .. +-.++++++.+
T Consensus 104 ~-~----~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGn 178 (415)
T PF00450_consen 104 D-P----SDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGN 178 (415)
T ss_dssp S-G----GGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEES
T ss_pred c-c----ccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecC
Confidence 1 0 011235788888888777653 3347999999999987644442 33 34578988887
Q ss_pred cC
Q 024033 128 TS 129 (273)
Q Consensus 128 ~~ 129 (273)
+.
T Consensus 179 g~ 180 (415)
T PF00450_consen 179 GW 180 (415)
T ss_dssp E-
T ss_pred cc
Confidence 63
No 190
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=96.58 E-value=0.0036 Score=55.39 Aligned_cols=81 Identities=22% Similarity=0.361 Sum_probs=53.2
Q ss_pred hchhhhhhhhhc-Cce----EE--EEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHH----HcCCCceEEEEEC
Q 024033 35 SIWDKITPVLSQ-HYR----VL--AFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLE----ENDLKSTLFIGHS 103 (273)
Q Consensus 35 ~~w~~~~~~L~~-~~~----vi--a~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~----~~~~~~~~lvGhS 103 (273)
..|..+++.|.. +|. ++ .+|+|=.-.. +. . .+.+-..+...++ ..|.+|++||+||
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~~--~e----------~-rd~yl~kLK~~iE~~~~~~G~kkVvlisHS 190 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRLSYHN--SE----------E-RDQYLSKLKKKIETMYKLNGGKKVVLISHS 190 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhhccCC--hh----------H-HHHHHHHHHHHHHHHHHHcCCCceEEEecC
Confidence 578899999887 765 33 4555431111 10 1 3344444444443 4466999999999
Q ss_pred hhHHHHHHHHhhCcc--------cccceEEeec
Q 024033 104 MSGMIGCIASVKKPE--------LFKRLILIGT 128 (273)
Q Consensus 104 ~GG~ia~~~a~~~p~--------~v~~lvl~~~ 128 (273)
|||.+.+.+...+++ .+++.+-+++
T Consensus 191 MG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~ 223 (473)
T KOG2369|consen 191 MGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGA 223 (473)
T ss_pred CccHHHHHHHhcccccchhHHHHHHHHHHccCc
Confidence 999999999998887 3566666654
No 191
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=96.55 E-value=0.0022 Score=40.98 Aligned_cols=37 Identities=24% Similarity=0.372 Sum_probs=20.2
Q ss_pred cccccccccccceEEecC-------CCceEEEecCCCCChhchh
Q 024033 2 VIREQGLSAAMNAKIIGS-------GKETLVLAHGFGGDQSIWD 38 (273)
Q Consensus 2 ~~~~~~~~~~~~~~~~G~-------~~~~vvllHG~~~~~~~w~ 38 (273)
|.|+||+.=.++=-..++ .+|+|+|.||+.+++..|-
T Consensus 17 V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~wv 60 (63)
T PF04083_consen 17 VTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDWV 60 (63)
T ss_dssp EE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGGC
T ss_pred EEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHHH
Confidence 567777766654322233 4678999999999999994
No 192
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=96.53 E-value=0.0066 Score=54.18 Aligned_cols=108 Identities=14% Similarity=0.052 Sum_probs=63.6
Q ss_pred CCceEEEecCC---CCChhchhhhhhhhhc-C-ceEEEEecCC--CccccCCC---CCCCCCCcccccHHHH---HHHHH
Q 024033 20 GKETLVLAHGF---GGDQSIWDKITPVLSQ-H-YRVLAFDWLF--SGAILNKD---HQSLYNPVKYSSYEAF---ADDLI 86 (273)
Q Consensus 20 ~~~~vvllHG~---~~~~~~w~~~~~~L~~-~-~~via~D~~G--~G~S~~~~---~~~~~~~~~~~s~~~~---a~~l~ 86 (273)
+.|.+|+|||- ++++..-..-...|++ + +-||.+++|= +|.=+-+. .+ ... ...- +.|+ .+.+.
T Consensus 93 ~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~-~~~-~n~G-l~DqilALkWV~ 169 (491)
T COG2272 93 KLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTED-AFA-SNLG-LLDQILALKWVR 169 (491)
T ss_pred CCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccc-ccc-cccc-HHHHHHHHHHHH
Confidence 45889999994 4444443344455665 3 6666776641 22110000 00 000 0011 3333 34456
Q ss_pred HHHHHcCCC--ceEEEEEChhHHHHHHHHh--hCcccccceEEeecCC
Q 024033 87 TLLEENDLK--STLFIGHSMSGMIGCIASV--KKPELFKRLILIGTSP 130 (273)
Q Consensus 87 ~~~~~~~~~--~~~lvGhS~GG~ia~~~a~--~~p~~v~~lvl~~~~~ 130 (273)
+-|+++|.+ +++|.|+|-||+.++.+.+ .....++++|+.++..
T Consensus 170 ~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~ 217 (491)
T COG2272 170 DNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAA 217 (491)
T ss_pred HHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCC
Confidence 778888765 6999999999999877665 3446788888887654
No 193
>PLN02571 triacylglycerol lipase
Probab=96.47 E-value=0.0045 Score=54.51 Aligned_cols=37 Identities=19% Similarity=0.349 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHcCCC--ceEEEEEChhHHHHHHHHhh
Q 024033 79 EAFADDLITLLEENDLK--STLFIGHSMSGMIGCIASVK 115 (273)
Q Consensus 79 ~~~a~~l~~~~~~~~~~--~~~lvGhS~GG~ia~~~a~~ 115 (273)
+.+.+++..+++....+ ++++.||||||.+|+..|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 55667777777766433 58999999999999998864
No 194
>PLN02454 triacylglycerol lipase
Probab=96.47 E-value=0.0051 Score=54.15 Aligned_cols=35 Identities=20% Similarity=0.377 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHcCCCc--eEEEEEChhHHHHHHHHhh
Q 024033 81 FADDLITLLEENDLKS--TLFIGHSMSGMIGCIASVK 115 (273)
Q Consensus 81 ~a~~l~~~~~~~~~~~--~~lvGhS~GG~ia~~~a~~ 115 (273)
+.+.+.++++.....+ +++.||||||.+|+.+|..
T Consensus 212 vl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 212 LLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 3444555555554444 8999999999999998854
No 195
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=96.46 E-value=0.0082 Score=51.51 Aligned_cols=61 Identities=16% Similarity=0.218 Sum_probs=48.1
Q ss_pred cCCCCCCEEEEecCCCCccchhHHHHHHHHcCCCeEEEEcCCCCCCCCccChHHHHHHHHHhhc
Q 024033 209 LDKVETPCTIFQPSNDAVVPNSVAYYMQEKMKGKSTVEIIEADGHFPQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 209 l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 272 (273)
..++.+|..||.|+.|..+++..++.+..++|+.+.+..+|+..|..- +..+.+.|+.|++
T Consensus 325 ~~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~---n~~i~esl~~fln 385 (507)
T COG4287 325 QLRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLI---NQFIKESLEPFLN 385 (507)
T ss_pred hhhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhh---HHHHHHHHHHHHH
Confidence 356789999999999999999999999999998888999999988653 3334445555543
No 196
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.40 E-value=0.0032 Score=54.68 Aligned_cols=87 Identities=20% Similarity=0.320 Sum_probs=52.8
Q ss_pred ceEEEecCCCC-ChhchhhhhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCCCceEEE
Q 024033 22 ETLVLAHGFGG-DQSIWDKITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDLKSTLFI 100 (273)
Q Consensus 22 ~~vvllHG~~~-~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~~~~~lv 100 (273)
--+||.||+-+ +...|...+......+.-..+..+|+=...... .+-..+- =+..++++++.+....++++.++
T Consensus 81 HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T----~~Gv~~l-G~Rla~~~~e~~~~~si~kISfv 155 (405)
T KOG4372|consen 81 HLVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGKMNNMCQT----FDGVDVL-GERLAEEVKETLYDYSIEKISFV 155 (405)
T ss_pred eEEEeccccccccHHHHHHHHHhhhcCCCcceEeeeccccchhhc----cccceee-ecccHHHHhhhhhccccceeeee
Confidence 36899999866 788887777776654322233334432221111 0101111 23456667777766668899999
Q ss_pred EEChhHHHHHHHH
Q 024033 101 GHSMSGMIGCIAS 113 (273)
Q Consensus 101 GhS~GG~ia~~~a 113 (273)
|||+||+++..+.
T Consensus 156 ghSLGGLvar~AI 168 (405)
T KOG4372|consen 156 GHSLGGLVARYAI 168 (405)
T ss_pred eeecCCeeeeEEE
Confidence 9999999975543
No 197
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.34 E-value=0.034 Score=49.71 Aligned_cols=109 Identities=18% Similarity=0.192 Sum_probs=79.9
Q ss_pred CCCceEEEecCCCCChhchh--h--hhhhhhc--CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHc
Q 024033 19 SGKETLVLAHGFGGDQSIWD--K--ITPVLSQ--HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEEN 92 (273)
Q Consensus 19 ~~~~~vvllHG~~~~~~~w~--~--~~~~L~~--~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~ 92 (273)
+++|..|||=|=+.....|- + ..-.+++ +-.|+-+.+|-||.|. |.....-...+|.|......|+.++++++
T Consensus 84 ~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~-P~~~~st~nlk~LSs~QALaDla~fI~~~ 162 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSS-PIGDLSTSNLKYLSSLQALADLAEFIKAM 162 (514)
T ss_pred CCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCC-CCCCCcccchhhhhHHHHHHHHHHHHHHH
Confidence 56677888888666666672 1 2223444 5689999999999983 32111112245777888999999999886
Q ss_pred CC-------CceEEEEEChhHHHHHHHHhhCcccccceEEeec
Q 024033 93 DL-------KSTLFIGHSMSGMIGCIASVKKPELFKRLILIGT 128 (273)
Q Consensus 93 ~~-------~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~ 128 (273)
.. .+-+..|=|.-|.++..+=.++|+.+.+-|..++
T Consensus 163 n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSa 205 (514)
T KOG2182|consen 163 NAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSA 205 (514)
T ss_pred HhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccccc
Confidence 32 2689999999999999999999999988887655
No 198
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=96.33 E-value=0.017 Score=53.17 Aligned_cols=104 Identities=18% Similarity=0.173 Sum_probs=55.9
Q ss_pred CceEEEecCCC---CCh--hchhhhhhhhhcCceEEEEecC----CCccccCCCCCCCCCC-cccccHHHHH---HHHHH
Q 024033 21 KETLVLAHGFG---GDQ--SIWDKITPVLSQHYRVLAFDWL----FSGAILNKDHQSLYNP-VKYSSYEAFA---DDLIT 87 (273)
Q Consensus 21 ~~~vvllHG~~---~~~--~~w~~~~~~L~~~~~via~D~~----G~G~S~~~~~~~~~~~-~~~~s~~~~a---~~l~~ 87 (273)
.|++|+|||-+ +++ ..+....-...++.-||.+.+| ||-.+.... .+ ..+- +-|+. +.+.+
T Consensus 125 lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~-----~~~gN~G-l~Dq~~AL~WV~~ 198 (535)
T PF00135_consen 125 LPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLD-----APSGNYG-LLDQRLALKWVQD 198 (535)
T ss_dssp EEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTT-----SHBSTHH-HHHHHHHHHHHHH
T ss_pred cceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccc-----cCchhhh-hhhhHHHHHHHHh
Confidence 47899999932 233 2222222223347778888775 333221111 01 1222 33333 33456
Q ss_pred HHHHcCCC--ceEEEEEChhHHHHHHHHhh--CcccccceEEeecCC
Q 024033 88 LLEENDLK--STLFIGHSMSGMIGCIASVK--KPELFKRLILIGTSP 130 (273)
Q Consensus 88 ~~~~~~~~--~~~lvGhS~GG~ia~~~a~~--~p~~v~~lvl~~~~~ 130 (273)
-|.++|.+ +++|.|||-||..+..+... ...+++++|+.++++
T Consensus 199 nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 199 NIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp HGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred hhhhcccCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 66677764 69999999999998665554 346899999999854
No 199
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.27 E-value=0.016 Score=45.33 Aligned_cols=52 Identities=19% Similarity=0.210 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHcC-----CCceEEEEEChhHHHHHHHHhhCcccccceEEeecC
Q 024033 78 YEAFADDLITLLEEND-----LKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTS 129 (273)
Q Consensus 78 ~~~~a~~l~~~~~~~~-----~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~ 129 (273)
-+.-+.+|..|++.+. -.+.+++|||+|+.++-..+...+..+..+++++++
T Consensus 87 A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSP 143 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSP 143 (177)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCC
Confidence 4555666777776652 346899999999999887777768899999998864
No 200
>PLN02408 phospholipase A1
Probab=96.15 E-value=0.009 Score=51.89 Aligned_cols=36 Identities=17% Similarity=0.325 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHcCCC--ceEEEEEChhHHHHHHHHhhC
Q 024033 81 FADDLITLLEENDLK--STLFIGHSMSGMIGCIASVKK 116 (273)
Q Consensus 81 ~a~~l~~~~~~~~~~--~~~lvGhS~GG~ia~~~a~~~ 116 (273)
..+++..+++....+ ++++.||||||.+|..+|...
T Consensus 184 Vl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 184 VREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 445566677666543 489999999999999888653
No 201
>PLN02934 triacylglycerol lipase
Probab=96.07 E-value=0.01 Score=53.45 Aligned_cols=37 Identities=27% Similarity=0.440 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHcCCCceEEEEEChhHHHHHHHHh
Q 024033 78 YEAFADDLITLLEENDLKSTLFIGHSMSGMIGCIASV 114 (273)
Q Consensus 78 ~~~~a~~l~~~~~~~~~~~~~lvGhS~GG~ia~~~a~ 114 (273)
++...+.+.+++++....++++.|||+||.+|..+|.
T Consensus 304 y~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 304 YYAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 4456777888888877678999999999999988874
No 202
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.98 E-value=0.06 Score=40.88 Aligned_cols=79 Identities=16% Similarity=0.253 Sum_probs=52.8
Q ss_pred CCceEEEecCCCCChhchhhhhhhhhcCce-EEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCCCceE
Q 024033 20 GKETLVLAHGFGGDQSIWDKITPVLSQHYR-VLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDLKSTL 98 (273)
Q Consensus 20 ~~~~vvllHG~~~~~~~w~~~~~~L~~~~~-via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~~~~~ 98 (273)
|...||..-||+..++....++ |.+.+. ++++|+...-.. ++ +.. ...+.
T Consensus 10 gd~LIvyFaGwgtpps~v~HLi--lpeN~dl~lcYDY~dl~ld--------fD------fsA-------------y~hir 60 (214)
T COG2830 10 GDHLIVYFAGWGTPPSAVNHLI--LPENHDLLLCYDYQDLNLD--------FD------FSA-------------YRHIR 60 (214)
T ss_pred CCEEEEEEecCCCCHHHHhhcc--CCCCCcEEEEeehhhcCcc--------cc------hhh-------------hhhhh
Confidence 3346888899999998887665 455555 558887554221 11 111 13577
Q ss_pred EEEEChhHHHHHHHHhhCcccccceEEeecC
Q 024033 99 FIGHSMSGMIGCIASVKKPELFKRLILIGTS 129 (273)
Q Consensus 99 lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~ 129 (273)
||++|||-.+|-.+..-.+ +++.+.++++
T Consensus 61 lvAwSMGVwvAeR~lqg~~--lksatAiNGT 89 (214)
T COG2830 61 LVAWSMGVWVAERVLQGIR--LKSATAINGT 89 (214)
T ss_pred hhhhhHHHHHHHHHHhhcc--ccceeeecCC
Confidence 9999999999988876654 5666767654
No 203
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=95.79 E-value=0.052 Score=47.40 Aligned_cols=101 Identities=20% Similarity=0.229 Sum_probs=61.1
Q ss_pred CceEEEecCCCCChhchhhhhhh-------hhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcC
Q 024033 21 KETLVLAHGFGGDQSIWDKITPV-------LSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEEND 93 (273)
Q Consensus 21 ~~~vvllHG~~~~~~~w~~~~~~-------L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~ 93 (273)
.|.|+.+||-|-.-.....++.. |. .-.++++|+.--. | ... ...+ ++. +.+.++--..+++..|
T Consensus 122 DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~-~-~~~-~~~y---PtQ-L~qlv~~Y~~Lv~~~G 193 (374)
T PF10340_consen 122 DPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTS-S-DEH-GHKY---PTQ-LRQLVATYDYLVESEG 193 (374)
T ss_pred CcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-CCeEEEEeccccc-c-ccC-CCcC---chH-HHHHHHHHHHHHhccC
Confidence 57899999976543333333322 33 4477788864321 0 000 0001 123 5566666666776778
Q ss_pred CCceEEEEEChhHHHHHHHHhh--Ccc---cccceEEeecC
Q 024033 94 LKSTLFIGHSMSGMIGCIASVK--KPE---LFKRLILIGTS 129 (273)
Q Consensus 94 ~~~~~lvGhS~GG~ia~~~a~~--~p~---~v~~lvl~~~~ 129 (273)
.++++|+|-|-||.+++.+... .+. .-+++|++++-
T Consensus 194 ~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPW 234 (374)
T PF10340_consen 194 NKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPW 234 (374)
T ss_pred CCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCC
Confidence 8999999999999998776542 211 13688999874
No 204
>PLN02324 triacylglycerol lipase
Probab=95.76 E-value=0.016 Score=50.99 Aligned_cols=36 Identities=25% Similarity=0.423 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHcCCC--ceEEEEEChhHHHHHHHHhh
Q 024033 80 AFADDLITLLEENDLK--STLFIGHSMSGMIGCIASVK 115 (273)
Q Consensus 80 ~~a~~l~~~~~~~~~~--~~~lvGhS~GG~ia~~~a~~ 115 (273)
.+.+++..+++....+ ++++.||||||.+|+..|..
T Consensus 198 qVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 198 QVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 3445566777766433 58999999999999988854
No 205
>PLN02802 triacylglycerol lipase
Probab=95.67 E-value=0.018 Score=51.88 Aligned_cols=36 Identities=17% Similarity=0.302 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHcCCC--ceEEEEEChhHHHHHHHHhh
Q 024033 80 AFADDLITLLEENDLK--STLFIGHSMSGMIGCIASVK 115 (273)
Q Consensus 80 ~~a~~l~~~~~~~~~~--~~~lvGhS~GG~ia~~~a~~ 115 (273)
...+++..+++....+ ++++.||||||.+|+..|..
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 3455566677665432 58999999999999888764
No 206
>PLN02310 triacylglycerol lipase
Probab=95.66 E-value=0.028 Score=49.50 Aligned_cols=37 Identities=19% Similarity=0.281 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHcC----CCceEEEEEChhHHHHHHHHhh
Q 024033 79 EAFADDLITLLEEND----LKSTLFIGHSMSGMIGCIASVK 115 (273)
Q Consensus 79 ~~~a~~l~~~~~~~~----~~~~~lvGhS~GG~ia~~~a~~ 115 (273)
+...+++..+++... .-++++.||||||.+|+..|..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 445556666666542 1368999999999999888854
No 207
>PLN02753 triacylglycerol lipase
Probab=95.59 E-value=0.02 Score=51.82 Aligned_cols=37 Identities=24% Similarity=0.397 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHcCC-----CceEEEEEChhHHHHHHHHhh
Q 024033 79 EAFADDLITLLEENDL-----KSTLFIGHSMSGMIGCIASVK 115 (273)
Q Consensus 79 ~~~a~~l~~~~~~~~~-----~~~~lvGhS~GG~ia~~~a~~ 115 (273)
+...+.+..+++.... -++++.|||+||.+|+..|..
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 3445556667766532 369999999999999998853
No 208
>PLN02719 triacylglycerol lipase
Probab=95.36 E-value=0.026 Score=50.91 Aligned_cols=36 Identities=19% Similarity=0.323 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHcCC-----CceEEEEEChhHHHHHHHHhh
Q 024033 80 AFADDLITLLEENDL-----KSTLFIGHSMSGMIGCIASVK 115 (273)
Q Consensus 80 ~~a~~l~~~~~~~~~-----~~~~lvGhS~GG~ia~~~a~~ 115 (273)
...+++..+++.... -++++.||||||.+|+..|..
T Consensus 278 QVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 278 QVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 344555666665532 268999999999999988853
No 209
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=95.29 E-value=0.05 Score=42.73 Aligned_cols=53 Identities=11% Similarity=0.070 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHcCCCceEEEEEChhHHHHHHHHhh------CcccccceEEeecCC
Q 024033 78 YEAFADDLITLLEENDLKSTLFIGHSMSGMIGCIASVK------KPELFKRLILIGTSP 130 (273)
Q Consensus 78 ~~~~a~~l~~~~~~~~~~~~~lvGhS~GG~ia~~~a~~------~p~~v~~lvl~~~~~ 130 (273)
.....+.+.+....-.-.+++|+|+|.|++|+..++.. ..++|.++++++-+.
T Consensus 64 ~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~ 122 (179)
T PF01083_consen 64 VANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPR 122 (179)
T ss_dssp HHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCc
Confidence 44455555555555566789999999999999888765 457889999988643
No 210
>PLN03037 lipase class 3 family protein; Provisional
Probab=95.19 E-value=0.031 Score=50.48 Aligned_cols=36 Identities=17% Similarity=0.272 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHcC----CCceEEEEEChhHHHHHHHHhh
Q 024033 80 AFADDLITLLEEND----LKSTLFIGHSMSGMIGCIASVK 115 (273)
Q Consensus 80 ~~a~~l~~~~~~~~----~~~~~lvGhS~GG~ia~~~a~~ 115 (273)
...+++..+++... -.++++.||||||.+|+..|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 34556667776553 1258999999999999888854
No 211
>PLN02761 lipase class 3 family protein
Probab=95.19 E-value=0.032 Score=50.46 Aligned_cols=35 Identities=17% Similarity=0.230 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHcC------CCceEEEEEChhHHHHHHHHh
Q 024033 80 AFADDLITLLEEND------LKSTLFIGHSMSGMIGCIASV 114 (273)
Q Consensus 80 ~~a~~l~~~~~~~~------~~~~~lvGhS~GG~ia~~~a~ 114 (273)
.+.+++..+++... .-++++.||||||.+|+..|.
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 44555666666552 125999999999999998885
No 212
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=95.04 E-value=0.49 Score=38.86 Aligned_cols=89 Identities=18% Similarity=0.237 Sum_probs=55.2
Q ss_pred eEEEecCC--CCCh-hchhhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHH--------HHHH
Q 024033 23 TLVLAHGF--GGDQ-SIWDKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLI--------TLLE 90 (273)
Q Consensus 23 ~vvllHG~--~~~~-~~w~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~--------~~~~ 90 (273)
.|-||=|. +..+ -.|+.+.+.|.+ +|.|||.-+.- | +| -...|.++. .+.+
T Consensus 19 vihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-t----------fD------H~~~A~~~~~~f~~~~~~L~~ 81 (250)
T PF07082_consen 19 VIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-T----------FD------HQAIAREVWERFERCLRALQK 81 (250)
T ss_pred EEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-C----------Cc------HHHHHHHHHHHHHHHHHHHHH
Confidence 56777773 3333 566889999988 89999875421 1 11 112222222 2222
Q ss_pred HcCCC----ceEEEEEChhHHHHHHHHhhCcccccceEEeec
Q 024033 91 ENDLK----STLFIGHSMSGMIGCIASVKKPELFKRLILIGT 128 (273)
Q Consensus 91 ~~~~~----~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~ 128 (273)
..++. ++.=+|||||+.+-+.+...++..-++.++++-
T Consensus 82 ~~~~~~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 82 RGGLDPAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred hcCCCcccCCeeeeecccchHHHHHHhhhccCcccceEEEec
Confidence 22222 456799999999988888777655578888874
No 213
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=94.95 E-value=0.09 Score=45.37 Aligned_cols=59 Identities=15% Similarity=0.188 Sum_probs=44.8
Q ss_pred CCCEEEEecCCCCccchhHHHHHHHHcC------------C-----------C-eEEEEcCCCCCCCCccChHHHHHHHH
Q 024033 213 ETPCTIFQPSNDAVVPNSVAYYMQEKMK------------G-----------K-STVEIIEADGHFPQLTAHLQLIDVLN 268 (273)
Q Consensus 213 ~~P~lii~G~~D~~~~~~~~~~~~~~~~------------~-----------~-~~~~~i~~~gH~~~~e~p~~~~~~i~ 268 (273)
.+++||..|+.|.+++.-..+.+.+.+. + . -++..+.+|||+++ .+|+...+.++
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 5899999999999999866555544432 0 0 23445568999998 59999999999
Q ss_pred Hhhc
Q 024033 269 KVLG 272 (273)
Q Consensus 269 ~fl~ 272 (273)
+|+.
T Consensus 312 ~fi~ 315 (319)
T PLN02213 312 RWIS 315 (319)
T ss_pred HHHc
Confidence 9985
No 214
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=94.86 E-value=0.047 Score=47.28 Aligned_cols=37 Identities=19% Similarity=0.417 Sum_probs=27.5
Q ss_pred CCCceEEEEEChhHHHHHHHHhhCcc-----cccceEEeecC
Q 024033 93 DLKSTLFIGHSMSGMIGCIASVKKPE-----LFKRLILIGTS 129 (273)
Q Consensus 93 ~~~~~~lvGhS~GG~ia~~~a~~~p~-----~v~~lvl~~~~ 129 (273)
|..|++|||||||+.+.......-++ .|..+++++++
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gap 259 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAP 259 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCC
Confidence 55689999999999998665543333 37888888764
No 215
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=94.77 E-value=0.047 Score=48.66 Aligned_cols=60 Identities=13% Similarity=0.166 Sum_probs=43.7
Q ss_pred CCCEEEEecCCCCccchhHHHHHHHHcC--CC-----------------------eEEEEcCCCCCCCCccChHHHHHHH
Q 024033 213 ETPCTIFQPSNDAVVPNSVAYYMQEKMK--GK-----------------------STVEIIEADGHFPQLTAHLQLIDVL 267 (273)
Q Consensus 213 ~~P~lii~G~~D~~~~~~~~~~~~~~~~--~~-----------------------~~~~~i~~~gH~~~~e~p~~~~~~i 267 (273)
++++|+..|..|.++|....+.+.+.+. +. -.+..|.+|||+++.++|++..+++
T Consensus 330 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP~~a~~m~ 409 (415)
T PF00450_consen 330 GIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQPEAALQMF 409 (415)
T ss_dssp T-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHHH
T ss_pred cceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhCHHHHHHHH
Confidence 4999999999999999877666655432 10 1356788999999999999999999
Q ss_pred HHhhc
Q 024033 268 NKVLG 272 (273)
Q Consensus 268 ~~fl~ 272 (273)
++||.
T Consensus 410 ~~fl~ 414 (415)
T PF00450_consen 410 RRFLK 414 (415)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 99985
No 216
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=94.49 E-value=0.058 Score=47.28 Aligned_cols=116 Identities=14% Similarity=0.097 Sum_probs=85.4
Q ss_pred ccccccceEEecCCCceEEEecCCCCChhch-hhhhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHH
Q 024033 7 GLSAAMNAKIIGSGKETLVLAHGFGGDQSIW-DKITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDL 85 (273)
Q Consensus 7 ~~~~~~~~~~~G~~~~~vvllHG~~~~~~~w-~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l 85 (273)
+|+-++.....+...|+|+..-|.+.+..-. .+....|. -+-+.+.+|-||.| +|.+ .++.+.|+..-|.|.
T Consensus 49 tF~QRvtLlHk~~drPtV~~T~GY~~~~~p~r~Ept~Lld--~NQl~vEhRfF~~S-rP~p----~DW~~Lti~QAA~D~ 121 (448)
T PF05576_consen 49 TFQQRVTLLHKDFDRPTVLYTEGYNVSTSPRRSEPTQLLD--GNQLSVEHRFFGPS-RPEP----ADWSYLTIWQAASDQ 121 (448)
T ss_pred ceEEEEEEEEcCCCCCeEEEecCcccccCccccchhHhhc--cceEEEEEeeccCC-CCCC----CCcccccHhHhhHHH
Confidence 4555555555566778888888876654323 23333333 46889999999999 6653 235677899999999
Q ss_pred HHHHHHcC---CCceEEEEEChhHHHHHHHHhhCcccccceEEeecC
Q 024033 86 ITLLEEND---LKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTS 129 (273)
Q Consensus 86 ~~~~~~~~---~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~ 129 (273)
+.+.+++. -++=+=-|-|=||+.++.+=..||+-|.+.|---++
T Consensus 122 Hri~~A~K~iY~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP 168 (448)
T PF05576_consen 122 HRIVQAFKPIYPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAP 168 (448)
T ss_pred HHHHHHHHhhccCCceecCcCCCceeEEEEeeeCCCCCCeeeeeecc
Confidence 99998873 245677799999999999999999999998875543
No 217
>PLN02847 triacylglycerol lipase
Probab=94.48 E-value=0.066 Score=49.18 Aligned_cols=29 Identities=21% Similarity=0.263 Sum_probs=21.1
Q ss_pred HHHHHcCCCceEEEEEChhHHHHHHHHhh
Q 024033 87 TLLEENDLKSTLFIGHSMSGMIGCIASVK 115 (273)
Q Consensus 87 ~~~~~~~~~~~~lvGhS~GG~ia~~~a~~ 115 (273)
+.++....=+++++||||||.+|..++..
T Consensus 243 kal~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 243 KALDEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHHCCCCeEEEeccChHHHHHHHHHHH
Confidence 34444443468999999999999877753
No 218
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=94.31 E-value=0.037 Score=39.81 Aligned_cols=22 Identities=27% Similarity=0.389 Sum_probs=13.4
Q ss_pred CCceEEEecCCCCChhchhhhh
Q 024033 20 GKETLVLAHGFGGDQSIWDKIT 41 (273)
Q Consensus 20 ~~~~vvllHG~~~~~~~w~~~~ 41 (273)
+..||||+|||+++--.|.+++
T Consensus 91 ~aiPLll~HGWPgSf~Ef~~vI 112 (112)
T PF06441_consen 91 NAIPLLLLHGWPGSFLEFLKVI 112 (112)
T ss_dssp T-EEEEEE--SS--GGGGHHHH
T ss_pred CCeEEEEECCCCccHHhHHhhC
Confidence 4458999999999988877653
No 219
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=93.67 E-value=0.11 Score=45.18 Aligned_cols=36 Identities=25% Similarity=0.394 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHcCCCceEEEEEChhHHHHHHHHh
Q 024033 79 EAFADDLITLLEENDLKSTLFIGHSMSGMIGCIASV 114 (273)
Q Consensus 79 ~~~a~~l~~~~~~~~~~~~~lvGhS~GG~ia~~~a~ 114 (273)
+.+-+++..+++....-++.+-||||||.+|..+|.
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~ 190 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAAL 190 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHH
Confidence 467777888888877567999999999999988775
No 220
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=93.57 E-value=0.37 Score=42.22 Aligned_cols=73 Identities=25% Similarity=0.191 Sum_probs=51.3
Q ss_pred EEEecCCCCChhchhhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHc----CCCceE
Q 024033 24 LVLAHGFGGDQSIWDKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEEN----DLKSTL 98 (273)
Q Consensus 24 vvllHG~~~~~~~w~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~----~~~~~~ 98 (273)
-||+-|=|+=...=.++...|++ ++.||-+|-.=|-.|. .|.+..++|+..+++.. +.+++.
T Consensus 263 av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~-------------rtPe~~a~Dl~r~i~~y~~~w~~~~~~ 329 (456)
T COG3946 263 AVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSE-------------RTPEQIAADLSRLIRFYARRWGAKRVL 329 (456)
T ss_pred EEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhcc-------------CCHHHHHHHHHHHHHHHHHhhCcceEE
Confidence 35555544322222467888888 7999999976665551 24778888888888654 667899
Q ss_pred EEEEChhHHHH
Q 024033 99 FIGHSMSGMIG 109 (273)
Q Consensus 99 lvGhS~GG~ia 109 (273)
|+|.|.|+-|-
T Consensus 330 liGySfGADvl 340 (456)
T COG3946 330 LIGYSFGADVL 340 (456)
T ss_pred EEeecccchhh
Confidence 99999999773
No 221
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=93.55 E-value=0.43 Score=47.47 Aligned_cols=98 Identities=19% Similarity=0.214 Sum_probs=68.6
Q ss_pred CCCceEEEecCCCCChhchhhhhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcC-CCce
Q 024033 19 SGKETLVLAHGFGGDQSIWDKITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEEND-LKST 97 (273)
Q Consensus 19 ~~~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~-~~~~ 97 (273)
+..|++.|+|-.-+...-...+...|. .|.||.-.... -+-+|+++.|.=-+.-+++.. ..++
T Consensus 2121 se~~~~Ffv~pIEG~tt~l~~la~rle---------~PaYglQ~T~~-------vP~dSies~A~~yirqirkvQP~GPY 2184 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTALESLASRLE---------IPAYGLQCTEA-------VPLDSIESLAAYYIRQIRKVQPEGPY 2184 (2376)
T ss_pred ccCCceEEEeccccchHHHHHHHhhcC---------Ccchhhhcccc-------CCcchHHHHHHHHHHHHHhcCCCCCe
Confidence 345789999998877777766666553 45566431111 112468888888777777764 4579
Q ss_pred EEEEEChhHHHHHHHHh--hCcccccceEEeecCCCc
Q 024033 98 LFIGHSMSGMIGCIASV--KKPELFKRLILIGTSPRY 132 (273)
Q Consensus 98 ~lvGhS~GG~ia~~~a~--~~p~~v~~lvl~~~~~~~ 132 (273)
.|+|.|+|+.++..+|. ...+-...+|+++.+|-+
T Consensus 2185 rl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGspty 2221 (2376)
T KOG1202|consen 2185 RLAGYSYGACLAFEMASQLQEQQSPAPLILLDGSPTY 2221 (2376)
T ss_pred eeeccchhHHHHHHHHHHHHhhcCCCcEEEecCchHH
Confidence 99999999999988885 333455679999998754
No 222
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=93.29 E-value=0.23 Score=39.83 Aligned_cols=39 Identities=15% Similarity=0.141 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHcCC-CceEEEEEChhHHHHHHHHhhC
Q 024033 78 YEAFADDLITLLEENDL-KSTLFIGHSMSGMIGCIASVKK 116 (273)
Q Consensus 78 ~~~~a~~l~~~~~~~~~-~~~~lvGhS~GG~ia~~~a~~~ 116 (273)
+.+..+....+|++.+- .+++|+|||=|+++...+...+
T Consensus 77 y~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 77 YSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 66777778888888754 5799999999999999988754
No 223
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=93.28 E-value=0.33 Score=43.70 Aligned_cols=59 Identities=17% Similarity=0.206 Sum_probs=45.3
Q ss_pred CCCEEEEecCCCCccchhHHHHHHHHcC-----------------CC-------eEEEEcCCCCCCCCccChHHHHHHHH
Q 024033 213 ETPCTIFQPSNDAVVPNSVAYYMQEKMK-----------------GK-------STVEIIEADGHFPQLTAHLQLIDVLN 268 (273)
Q Consensus 213 ~~P~lii~G~~D~~~~~~~~~~~~~~~~-----------------~~-------~~~~~i~~~gH~~~~e~p~~~~~~i~ 268 (273)
.+++++..|+.|.++|....+.+.+.+. +. -+++.+.+|||+++ .+|++..+.++
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 5899999999999999876665544332 00 13456678999997 59999999999
Q ss_pred Hhhc
Q 024033 269 KVLG 272 (273)
Q Consensus 269 ~fl~ 272 (273)
+|+.
T Consensus 426 ~Fi~ 429 (433)
T PLN03016 426 RWIS 429 (433)
T ss_pred HHHc
Confidence 9985
No 224
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=93.17 E-value=0.38 Score=43.31 Aligned_cols=106 Identities=21% Similarity=0.126 Sum_probs=61.3
Q ss_pred CceEEEecCCCCChh---chhhhhhh-------------h-------hcCceEEEEe-cCCCccccCCCCCCCCCCcccc
Q 024033 21 KETLVLAHGFGGDQS---IWDKITPV-------------L-------SQHYRVLAFD-WLFSGAILNKDHQSLYNPVKYS 76 (273)
Q Consensus 21 ~~~vvllHG~~~~~~---~w~~~~~~-------------L-------~~~~~via~D-~~G~G~S~~~~~~~~~~~~~~~ 76 (273)
.|.|+.+-|-+++++ .|.++.|. | .+..+++-+| ..|.|.|-..... .. .....
T Consensus 66 ~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~-~~-~~d~~ 143 (433)
T PLN03016 66 DPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPI-DK-TGDIS 143 (433)
T ss_pred CCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCC-Cc-cCCHH
Confidence 578999999888776 34444443 1 2236799999 7899998321100 00 01111
Q ss_pred cHHHHHHHHHHHHHHc---CCCceEEEEEChhHHHHHHHHh----hC------cccccceEEeec
Q 024033 77 SYEAFADDLITLLEEN---DLKSTLFIGHSMSGMIGCIASV----KK------PELFKRLILIGT 128 (273)
Q Consensus 77 s~~~~a~~l~~~~~~~---~~~~~~lvGhS~GG~ia~~~a~----~~------p~~v~~lvl~~~ 128 (273)
+.+++.+-+..+++.. .-.+++|.|.|.||.-+-.+|. .. +-.++++++.++
T Consensus 144 ~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg 208 (433)
T PLN03016 144 EVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNP 208 (433)
T ss_pred HHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCC
Confidence 1233444444444433 2356999999999986544443 22 125678877765
No 225
>PLN02209 serine carboxypeptidase
Probab=93.12 E-value=0.35 Score=43.61 Aligned_cols=59 Identities=14% Similarity=0.202 Sum_probs=45.1
Q ss_pred CCCEEEEecCCCCccchhHHHHHHHHcC-------------C----------C-eEEEEcCCCCCCCCccChHHHHHHHH
Q 024033 213 ETPCTIFQPSNDAVVPNSVAYYMQEKMK-------------G----------K-STVEIIEADGHFPQLTAHLQLIDVLN 268 (273)
Q Consensus 213 ~~P~lii~G~~D~~~~~~~~~~~~~~~~-------------~----------~-~~~~~i~~~gH~~~~e~p~~~~~~i~ 268 (273)
.+++++..|+.|.+++....+.+.+.+. + . -+++.+.+|||+++ .+|++..+.++
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 5899999999999999866665544332 1 0 13445678999997 59999999999
Q ss_pred Hhhc
Q 024033 269 KVLG 272 (273)
Q Consensus 269 ~fl~ 272 (273)
+|+.
T Consensus 430 ~fi~ 433 (437)
T PLN02209 430 RWIS 433 (437)
T ss_pred HHHc
Confidence 9985
No 226
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=92.25 E-value=6.2 Score=37.09 Aligned_cols=105 Identities=19% Similarity=0.129 Sum_probs=62.2
Q ss_pred ceEEEecCC-CC-ChhchhhhhhhhhcCceEEEE-ecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHc--CCCc
Q 024033 22 ETLVLAHGF-GG-DQSIWDKITPVLSQHYRVLAF-DWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEEN--DLKS 96 (273)
Q Consensus 22 ~~vvllHG~-~~-~~~~w~~~~~~L~~~~~via~-D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~--~~~~ 96 (273)
|.+|..-|- |. ....|+...-.|-++-=|+|+ -.||=|.=-..+.++..-..+-.|+.++.+....+++.= .-+.
T Consensus 449 p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~ 528 (682)
T COG1770 449 PLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDR 528 (682)
T ss_pred cEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCCccc
Confidence 555555553 22 234455444445453233333 346644321111110110112246999888888887652 1236
Q ss_pred eEEEEEChhHHHHHHHHhhCcccccceEEe
Q 024033 97 TLFIGHSMSGMIGCIASVKKPELFKRLILI 126 (273)
Q Consensus 97 ~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~ 126 (273)
+.+.|=|-||++.-..+...|++++++|.-
T Consensus 529 i~a~GGSAGGmLmGav~N~~P~lf~~iiA~ 558 (682)
T COG1770 529 IVAIGGSAGGMLMGAVANMAPDLFAGIIAQ 558 (682)
T ss_pred eEEeccCchhHHHHHHHhhChhhhhheeec
Confidence 899999999999999999999999998864
No 227
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=92.08 E-value=0.23 Score=44.75 Aligned_cols=60 Identities=17% Similarity=0.207 Sum_probs=45.1
Q ss_pred CCCEEEEecCCCCccchhHHHHHHHHc------------------CCC------eEEEEcCCCCCCCCccChHHHHHHHH
Q 024033 213 ETPCTIFQPSNDAVVPNSVAYYMQEKM------------------KGK------STVEIIEADGHFPQLTAHLQLIDVLN 268 (273)
Q Consensus 213 ~~P~lii~G~~D~~~~~~~~~~~~~~~------------------~~~------~~~~~i~~~gH~~~~e~p~~~~~~i~ 268 (273)
..|++|..|+.|.++|.-..+.+-+.+ .+. ..+..+.||||+++.++|+.-...++
T Consensus 363 ~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~ 442 (454)
T KOG1282|consen 363 GYRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQ 442 (454)
T ss_pred ceEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHH
Confidence 389999999999999976555432211 110 12356679999999999999999999
Q ss_pred Hhhc
Q 024033 269 KVLG 272 (273)
Q Consensus 269 ~fl~ 272 (273)
+|+.
T Consensus 443 ~fl~ 446 (454)
T KOG1282|consen 443 RFLN 446 (454)
T ss_pred HHHc
Confidence 9984
No 228
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=91.98 E-value=1.1 Score=40.63 Aligned_cols=102 Identities=14% Similarity=0.147 Sum_probs=64.7
Q ss_pred CceEEEecCCCCChhchhhhhhh-------------------hhcCceEEEEe-cCCCccccCCCCCCCCCCcccccHHH
Q 024033 21 KETLVLAHGFGGDQSIWDKITPV-------------------LSQHYRVLAFD-WLFSGAILNKDHQSLYNPVKYSSYEA 80 (273)
Q Consensus 21 ~~~vvllHG~~~~~~~w~~~~~~-------------------L~~~~~via~D-~~G~G~S~~~~~~~~~~~~~~~s~~~ 80 (273)
+|.|+.+-|-+++++.|-.+.+. +.+.-.++.+| ..|-|.|.....+ .-.++..
T Consensus 101 rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e------~~~d~~~ 174 (498)
T COG2939 101 RPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDE------KKKDFEG 174 (498)
T ss_pred CceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccc------cccchhc
Confidence 57889999999999988655211 12234799999 7899999431100 0112444
Q ss_pred HHHHHHHHH-------HHcC--CCceEEEEEChhHHHHHHHHhhCcc---cccceEEeec
Q 024033 81 FADDLITLL-------EEND--LKSTLFIGHSMSGMIGCIASVKKPE---LFKRLILIGT 128 (273)
Q Consensus 81 ~a~~l~~~~-------~~~~--~~~~~lvGhS~GG~ia~~~a~~~p~---~v~~lvl~~~ 128 (273)
..+|+..+. .+.. ..+.+|+|-|.||.-+-.+|..--+ ..++++.+.+
T Consensus 175 ~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlss 234 (498)
T COG2939 175 AGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSS 234 (498)
T ss_pred cchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeee
Confidence 444444333 3333 3589999999999888777754333 3566666654
No 229
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=90.90 E-value=0.71 Score=35.67 Aligned_cols=110 Identities=17% Similarity=0.193 Sum_probs=61.4
Q ss_pred cceEEecCCCceEEEecCCCCChhchhh------hhhhhhc-CceEEEEecCCCccccCCCCCCCCCCccc--ccHHHHH
Q 024033 12 MNAKIIGSGKETLVLAHGFGGDQSIWDK------ITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKY--SSYEAFA 82 (273)
Q Consensus 12 ~~~~~~G~~~~~vvllHG~~~~~~~w~~------~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~--~s~~~~a 82 (273)
|-+..+|.++.|||+.+--++.-..|.. +.+.+.+ +-..++++ | ..+. +.++.... ...+...
T Consensus 17 Mel~ryGHaG~pVvvFpts~Grf~eyed~G~v~ala~fie~G~vQlft~~--g--ldsE----Sf~a~h~~~adr~~rH~ 88 (227)
T COG4947 17 MELNRYGHAGIPVVVFPTSGGRFNEYEDFGMVDALASFIEEGLVQLFTLS--G--LDSE----SFLATHKNAADRAERHR 88 (227)
T ss_pred hhhhhccCCCCcEEEEecCCCcchhhhhcccHHHHHHHHhcCcEEEEEec--c--cchH----hHhhhcCCHHHHHHHHH
Confidence 3455678766678887776666555543 2333444 34555554 2 1111 01111110 0122111
Q ss_pred HHHHHHHHHcCCCceEEEEEChhHHHHHHHHhhCcccccceEEeecC
Q 024033 83 DDLITLLEENDLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTS 129 (273)
Q Consensus 83 ~~l~~~~~~~~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~ 129 (273)
.--.=++++.=..+.++-|-||||.-|..+..++|+.++++|.++..
T Consensus 89 AyerYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGv 135 (227)
T COG4947 89 AYERYVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGV 135 (227)
T ss_pred HHHHHHHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecce
Confidence 11112233222245777899999999999999999999999998763
No 230
>PLN02209 serine carboxypeptidase
Probab=90.87 E-value=0.94 Score=40.89 Aligned_cols=102 Identities=17% Similarity=0.166 Sum_probs=61.0
Q ss_pred CceEEEecCCCCChhchhh---hhhh--------------------hhcCceEEEEe-cCCCccccCCCCCCCCCCcccc
Q 024033 21 KETLVLAHGFGGDQSIWDK---ITPV--------------------LSQHYRVLAFD-WLFSGAILNKDHQSLYNPVKYS 76 (273)
Q Consensus 21 ~~~vvllHG~~~~~~~w~~---~~~~--------------------L~~~~~via~D-~~G~G~S~~~~~~~~~~~~~~~ 76 (273)
.|.|+.+-|-+++++.+-. +.|. +.+..+++-+| ..|.|.|-.... ..+.
T Consensus 68 ~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~------~~~~ 141 (437)
T PLN02209 68 DPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTP------IERT 141 (437)
T ss_pred CCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCC------CCcc
Confidence 5789999999888777632 2222 22235799999 789999832210 1112
Q ss_pred cHHHHHHHHHHHHHH----c---CCCceEEEEEChhHHHHHHHHh----hC------cccccceEEeec
Q 024033 77 SYEAFADDLITLLEE----N---DLKSTLFIGHSMSGMIGCIASV----KK------PELFKRLILIGT 128 (273)
Q Consensus 77 s~~~~a~~l~~~~~~----~---~~~~~~lvGhS~GG~ia~~~a~----~~------p~~v~~lvl~~~ 128 (273)
+-++.++++.+++.. . .-.+++|.|.|.||.-+-.+|. .. +=.++++++.++
T Consensus 142 ~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng 210 (437)
T PLN02209 142 SDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNP 210 (437)
T ss_pred CCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCc
Confidence 223334555555544 3 2347999999999985544442 22 124567777765
No 231
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=90.74 E-value=0.57 Score=43.45 Aligned_cols=102 Identities=18% Similarity=0.173 Sum_probs=63.3
Q ss_pred EEecCCCCCh----hchhhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHc--CCCce
Q 024033 25 VLAHGFGGDQ----SIWDKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEEN--DLKST 97 (273)
Q Consensus 25 vllHG~~~~~----~~w~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~--~~~~~ 97 (273)
.||||.|+=. -.|+.-.-.|-+ ++-..-.|.||=|.=-..++.+..-..+-.+++++..-..-+++.- .-++.
T Consensus 472 ~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL 551 (712)
T KOG2237|consen 472 LLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKL 551 (712)
T ss_pred eEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCccce
Confidence 4555554432 445443334444 6666677999977532223221111111234777776666666531 23468
Q ss_pred EEEEEChhHHHHHHHHhhCcccccceEEe
Q 024033 98 LFIGHSMSGMIGCIASVKKPELFKRLILI 126 (273)
Q Consensus 98 ~lvGhS~GG~ia~~~a~~~p~~v~~lvl~ 126 (273)
.+.|-|-||.++-.++..+|+++.++|+-
T Consensus 552 ~i~G~SaGGlLvga~iN~rPdLF~avia~ 580 (712)
T KOG2237|consen 552 AIEGGSAGGLLVGACINQRPDLFGAVIAK 580 (712)
T ss_pred eEecccCccchhHHHhccCchHhhhhhhc
Confidence 89999999999999999999999888763
No 232
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.63 E-value=0.44 Score=43.80 Aligned_cols=38 Identities=26% Similarity=0.505 Sum_probs=26.2
Q ss_pred cHHHHHHHHHHHHHHcCC---CceEEEEEChhHHHHHHHHh
Q 024033 77 SYEAFADDLITLLEENDL---KSTLFIGHSMSGMIGCIASV 114 (273)
Q Consensus 77 s~~~~a~~l~~~~~~~~~---~~~~lvGhS~GG~ia~~~a~ 114 (273)
++..-+..+.+.+.+.++ .+++.|||||||..+=.+.+
T Consensus 505 sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLl 545 (697)
T KOG2029|consen 505 SLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLL 545 (697)
T ss_pred HHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHH
Confidence 355555666666665543 46899999999998755544
No 233
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=89.89 E-value=1.7 Score=40.41 Aligned_cols=103 Identities=17% Similarity=0.158 Sum_probs=57.5
Q ss_pred CceEEEecCCC---CChhchhhhh-hhhhc--CceEEEEecC----CCccccCCCCCCCCCCcccccHHHHHHHH---HH
Q 024033 21 KETLVLAHGFG---GDQSIWDKIT-PVLSQ--HYRVLAFDWL----FSGAILNKDHQSLYNPVKYSSYEAFADDL---IT 87 (273)
Q Consensus 21 ~~~vvllHG~~---~~~~~w~~~~-~~L~~--~~~via~D~~----G~G~S~~~~~~~~~~~~~~~s~~~~a~~l---~~ 87 (273)
.|++|.+||-+ +++..+.... ..+.. ..-|+.+.+| |+.-..... .+..+. +-|+...+ .+
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~-----~~gN~g-l~Dq~~AL~wv~~ 185 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSA-----APGNLG-LFDQLLALRWVKD 185 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCC-----CCCccc-HHHHHHHHHHHHH
Confidence 57899999953 3444442221 12222 2334444443 444331111 112233 44444443 45
Q ss_pred HHHHcCC--CceEEEEEChhHHHHHHHHhh--CcccccceEEeecC
Q 024033 88 LLEENDL--KSTLFIGHSMSGMIGCIASVK--KPELFKRLILIGTS 129 (273)
Q Consensus 88 ~~~~~~~--~~~~lvGhS~GG~ia~~~a~~--~p~~v~~lvl~~~~ 129 (273)
-+..+|. ++++|+|||-||.++..++.. ...++.+.|.++++
T Consensus 186 ~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 186 NIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGN 231 (545)
T ss_pred HHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccc
Confidence 5566654 469999999999999777752 33578888888765
No 234
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=87.36 E-value=6.7 Score=36.47 Aligned_cols=103 Identities=19% Similarity=0.179 Sum_probs=62.6
Q ss_pred CceEEEecC-CCC-Chhchhh-hhhhhhcCceEEEEecCCCccccCC-CCCCCCCCcccccHHHHHHHHHHHHHHcCC--
Q 024033 21 KETLVLAHG-FGG-DQSIWDK-ITPVLSQHYRVLAFDWLFSGAILNK-DHQSLYNPVKYSSYEAFADDLITLLEENDL-- 94 (273)
Q Consensus 21 ~~~vvllHG-~~~-~~~~w~~-~~~~L~~~~~via~D~~G~G~S~~~-~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~-- 94 (273)
+|++|.--| |.- ..-.|+. ....|..+.-.+.-.+||=|.= .| .|+..-...+-..+++++..+.+++++ |+
T Consensus 421 ~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEf-Gp~WH~Aa~k~nrq~vfdDf~AVaedLi~r-gits 498 (648)
T COG1505 421 NPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEF-GPEWHQAGMKENKQNVFDDFIAVAEDLIKR-GITS 498 (648)
T ss_pred CceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCcc-CHHHHHHHhhhcchhhhHHHHHHHHHHHHh-CCCC
Confidence 455554444 211 1233433 3555777878888899997653 12 111000001112377777766666654 44
Q ss_pred -CceEEEEEChhHHHHHHHHhhCcccccceEE
Q 024033 95 -KSTLFIGHSMSGMIGCIASVKKPELFKRLIL 125 (273)
Q Consensus 95 -~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl 125 (273)
++.-+-|=|-||++.-...-++|+.+.++|.
T Consensus 499 pe~lgi~GgSNGGLLvg~alTQrPelfgA~v~ 530 (648)
T COG1505 499 PEKLGIQGGSNGGLLVGAALTQRPELFGAAVC 530 (648)
T ss_pred HHHhhhccCCCCceEEEeeeccChhhhCceee
Confidence 3578889999999988888899999877764
No 235
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=87.19 E-value=0.97 Score=37.86 Aligned_cols=29 Identities=17% Similarity=0.235 Sum_probs=22.7
Q ss_pred HHHcCCCceEEEEEChhHHHHHHHHhhCc
Q 024033 89 LEENDLKSTLFIGHSMSGMIGCIASVKKP 117 (273)
Q Consensus 89 ~~~~~~~~~~lvGhS~GG~ia~~~a~~~p 117 (273)
.+.....++.|-|||+||.+|..+..++.
T Consensus 270 ~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 270 RRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHhCCCceEEEeccccchHHHHHhccccC
Confidence 33344456889999999999999988765
No 236
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=87.19 E-value=0.97 Score=37.86 Aligned_cols=29 Identities=17% Similarity=0.235 Sum_probs=22.7
Q ss_pred HHHcCCCceEEEEEChhHHHHHHHHhhCc
Q 024033 89 LEENDLKSTLFIGHSMSGMIGCIASVKKP 117 (273)
Q Consensus 89 ~~~~~~~~~~lvGhS~GG~ia~~~a~~~p 117 (273)
.+.....++.|-|||+||.+|..+..++.
T Consensus 270 ~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 270 RRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHhCCCceEEEeccccchHHHHHhccccC
Confidence 33344456889999999999999988765
No 237
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=86.80 E-value=2.7 Score=36.28 Aligned_cols=75 Identities=19% Similarity=0.153 Sum_probs=42.7
Q ss_pred ceEEEEecC-CCccccCCCCCCCCCCcccccHHHHHHHHHHHHH----Hc---CCCceEEEEEChhHHHHHHHHh----h
Q 024033 48 YRVLAFDWL-FSGAILNKDHQSLYNPVKYSSYEAFADDLITLLE----EN---DLKSTLFIGHSMSGMIGCIASV----K 115 (273)
Q Consensus 48 ~~via~D~~-G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~----~~---~~~~~~lvGhS~GG~ia~~~a~----~ 115 (273)
.+++-+|.| |-|.|-... +..+.+-+..|+|+..++. .. .-.+++|.|-|.||.-+=.+|. .
T Consensus 2 aNvLfiDqPvGvGfSy~~~------~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~ 75 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKT------PIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQG 75 (319)
T ss_pred ccEEEecCCCCCCCCCCCC------CCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhh
Confidence 368899988 999883211 0112211223345544444 33 3457999999999986544443 2
Q ss_pred C------cccccceEEeec
Q 024033 116 K------PELFKRLILIGT 128 (273)
Q Consensus 116 ~------p~~v~~lvl~~~ 128 (273)
. +=.++++++-++
T Consensus 76 n~~~~~~~inLkGi~IGNg 94 (319)
T PLN02213 76 NYICCEPPINLQGYMLGNP 94 (319)
T ss_pred cccccCCceeeeEEEeCCC
Confidence 2 125677777665
No 238
>PRK12467 peptide synthase; Provisional
Probab=84.32 E-value=4.4 Score=46.93 Aligned_cols=100 Identities=16% Similarity=0.084 Sum_probs=70.0
Q ss_pred CCceEEEecCCCCChhchhhhhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHc-CCCceE
Q 024033 20 GKETLVLAHGFGGDQSIWDKITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEEN-DLKSTL 98 (273)
Q Consensus 20 ~~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~-~~~~~~ 98 (273)
+.+.|++.|...++...+.++...|..+..|+.+..++.-.. . ....+++.++..-.+.+... ...+..
T Consensus 3691 ~~~~l~~~h~~~r~~~~~~~l~~~l~~~~~~~~l~~~~~~~d-~---------~~~~~~~~~~~~y~~~~~~~~~~~p~~ 3760 (3956)
T PRK12467 3691 GFPALFCRHEGLGTVFDYEPLAVILEGDRHVLGLTCRHLLDD-G---------WQDTSLQAMAVQYADYILWQQAKGPYG 3760 (3956)
T ss_pred cccceeeechhhcchhhhHHHHHHhCCCCcEEEEeccccccc-c---------CCccchHHHHHHHHHHHHHhccCCCee
Confidence 335699999999888888888888988888888877654211 1 11234776666666666543 234789
Q ss_pred EEEEChhHHHHHHHHhh---CcccccceEEeecC
Q 024033 99 FIGHSMSGMIGCIASVK---KPELFKRLILIGTS 129 (273)
Q Consensus 99 lvGhS~GG~ia~~~a~~---~p~~v~~lvl~~~~ 129 (273)
+.|+|+||.++..++.. ..+.+.-+.+++..
T Consensus 3761 l~g~s~g~~~a~~~~~~l~~~g~~~~~~~~~~~~ 3794 (3956)
T PRK12467 3761 LLGWSLGGTLARLVAELLEREGESEAFLGLFDNT 3794 (3956)
T ss_pred eeeeecchHHHHHHHHHHHHcCCceeEEEEEecc
Confidence 99999999999887753 44566666666543
No 239
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=83.19 E-value=0.99 Score=38.83 Aligned_cols=29 Identities=31% Similarity=0.452 Sum_probs=24.4
Q ss_pred HHHHHHHcCCCceEEEEEChhHHHHHHHH
Q 024033 85 LITLLEENDLKSTLFIGHSMSGMIGCIAS 113 (273)
Q Consensus 85 l~~~~~~~~~~~~~lvGhS~GG~ia~~~a 113 (273)
+.+++++.|+++-.++|||+|=+.|+.+|
T Consensus 74 l~~~l~~~Gi~P~~v~GhSlGE~aA~~aa 102 (318)
T PF00698_consen 74 LARLLRSWGIKPDAVIGHSLGEYAALVAA 102 (318)
T ss_dssp HHHHHHHTTHCESEEEESTTHHHHHHHHT
T ss_pred hhhhhcccccccceeeccchhhHHHHHHC
Confidence 45677888999999999999988887665
No 240
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=83.10 E-value=1.6 Score=37.07 Aligned_cols=30 Identities=17% Similarity=0.306 Sum_probs=24.7
Q ss_pred HHHHHHHcCCCceEEEEEChhHHHHHHHHh
Q 024033 85 LITLLEENDLKSTLFIGHSMSGMIGCIASV 114 (273)
Q Consensus 85 l~~~~~~~~~~~~~lvGhS~GG~ia~~~a~ 114 (273)
+.+++.++|+++-.++|||+|-+.|+.++-
T Consensus 72 ~~~~l~~~Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 72 LARLWRSWGVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHHcCCcccEEEecCHHHHHHHHHhC
Confidence 445667889999999999999998877663
No 241
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=79.48 E-value=2.6 Score=35.81 Aligned_cols=29 Identities=10% Similarity=0.029 Sum_probs=24.0
Q ss_pred HHHHHHHcCCCceEEEEEChhHHHHHHHH
Q 024033 85 LITLLEENDLKSTLFIGHSMSGMIGCIAS 113 (273)
Q Consensus 85 l~~~~~~~~~~~~~lvGhS~GG~ia~~~a 113 (273)
+.+.+.+.|+++..++|||+|=+.|..++
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~~a 94 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAVVA 94 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHHHh
Confidence 44566778999999999999998887766
No 242
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=78.64 E-value=5.4 Score=36.37 Aligned_cols=38 Identities=16% Similarity=0.319 Sum_probs=28.8
Q ss_pred cCCCceEEEEEChhHHHHHHHHh-----hCcccccceEEeecC
Q 024033 92 NDLKSTLFIGHSMSGMIGCIASV-----KKPELFKRLILIGTS 129 (273)
Q Consensus 92 ~~~~~~~lvGhS~GG~ia~~~a~-----~~p~~v~~lvl~~~~ 129 (273)
.|..|++|||.|+|+-+...... +.-..|.-+++++++
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaP 486 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAP 486 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCC
Confidence 47789999999999999864433 233567888888875
No 243
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=78.37 E-value=2.9 Score=35.25 Aligned_cols=30 Identities=30% Similarity=0.373 Sum_probs=23.7
Q ss_pred HHHHHHHcC-CCceEEEEEChhHHHHHHHHh
Q 024033 85 LITLLEEND-LKSTLFIGHSMSGMIGCIASV 114 (273)
Q Consensus 85 l~~~~~~~~-~~~~~lvGhS~GG~ia~~~a~ 114 (273)
+.+.+.+.+ +.+..++|||+|=+.|+.++-
T Consensus 72 l~~~l~~~g~i~p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 72 LYLKLKEQGGLKPDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred HHHHHHHcCCCCCCEEeecCHHHHHHHHHhC
Confidence 345566677 999999999999988877763
No 244
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=76.93 E-value=4.8 Score=36.81 Aligned_cols=89 Identities=21% Similarity=0.221 Sum_probs=59.5
Q ss_pred hhhhhhcCceEEEEecCCCccccCC-CCCCCCCCcc-----cccHHHHHHHHHHHHHHc---CCCceEEEEEChhHHHHH
Q 024033 40 ITPVLSQHYRVLAFDWLFSGAILNK-DHQSLYNPVK-----YSSYEAFADDLITLLEEN---DLKSTLFIGHSMSGMIGC 110 (273)
Q Consensus 40 ~~~~L~~~~~via~D~~G~G~S~~~-~~~~~~~~~~-----~~s~~~~a~~l~~~~~~~---~~~~~~lvGhS~GG~ia~ 110 (273)
+...|+.+|-+++=|- ||..+... +.....++.. |.++...+..-+++++++ ..+.-...|-|-||.=++
T Consensus 52 ~~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl 130 (474)
T PF07519_consen 52 MATALARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGL 130 (474)
T ss_pred cchhhhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHH
Confidence 5677888999999885 66655220 1000011111 233444455555566554 345678999999999999
Q ss_pred HHHhhCcccccceEEeecC
Q 024033 111 IASVKKPELFKRLILIGTS 129 (273)
Q Consensus 111 ~~a~~~p~~v~~lvl~~~~ 129 (273)
..|.+||+.+.+++..+++
T Consensus 131 ~~AQryP~dfDGIlAgaPA 149 (474)
T PF07519_consen 131 MAAQRYPEDFDGILAGAPA 149 (474)
T ss_pred HHHHhChhhcCeEEeCCch
Confidence 9999999999999987763
No 245
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=74.19 E-value=5.3 Score=34.27 Aligned_cols=32 Identities=25% Similarity=0.455 Sum_probs=26.5
Q ss_pred HHHHHHHcCCCceEEEEEChhHHHHHHHHhhC
Q 024033 85 LITLLEENDLKSTLFIGHSMSGMIGCIASVKK 116 (273)
Q Consensus 85 l~~~~~~~~~~~~~lvGhS~GG~ia~~~a~~~ 116 (273)
+++.+++.|+..-.++|-|+|+.++..+|..+
T Consensus 33 vL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 33 VIKALEEAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 56666677888778999999999999988763
No 246
>PRK10279 hypothetical protein; Provisional
Probab=72.92 E-value=5.5 Score=34.04 Aligned_cols=34 Identities=15% Similarity=0.361 Sum_probs=27.9
Q ss_pred HHHHHHHcCCCceEEEEEChhHHHHHHHHhhCcc
Q 024033 85 LITLLEENDLKSTLFIGHSMSGMIGCIASVKKPE 118 (273)
Q Consensus 85 l~~~~~~~~~~~~~lvGhS~GG~ia~~~a~~~p~ 118 (273)
+.+.+++.++..-.++|-|+|+.++..+|....+
T Consensus 23 VL~aL~E~gi~~d~i~GtS~GAlvga~yA~g~~~ 56 (300)
T PRK10279 23 VINALKKVGIEIDIVAGCSIGSLVGAAYACDRLS 56 (300)
T ss_pred HHHHHHHcCCCcCEEEEEcHHHHHHHHHHcCChH
Confidence 5566666899888999999999999999976544
No 247
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=72.65 E-value=6.3 Score=30.96 Aligned_cols=32 Identities=16% Similarity=0.235 Sum_probs=24.9
Q ss_pred HHHHHHHcCCCceEEEEEChhHHHHHHHHhhC
Q 024033 85 LITLLEENDLKSTLFIGHSMSGMIGCIASVKK 116 (273)
Q Consensus 85 l~~~~~~~~~~~~~lvGhS~GG~ia~~~a~~~ 116 (273)
+.+.+++.++..-.++|-|.||++|..++...
T Consensus 17 vl~~L~e~~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 17 ALKALEEAGILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHHcCCCcceEEEECHHHHHHHHHHcCC
Confidence 44445556777778999999999999998754
No 248
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=71.68 E-value=13 Score=29.73 Aligned_cols=48 Identities=15% Similarity=0.132 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHcCCCceEEEEECh----hHHHHHHHHhhCc-ccccceEEe
Q 024033 78 YEAFADDLITLLEENDLKSTLFIGHSM----SGMIGCIASVKKP-ELFKRLILI 126 (273)
Q Consensus 78 ~~~~a~~l~~~~~~~~~~~~~lvGhS~----GG~ia~~~a~~~p-~~v~~lvl~ 126 (273)
.+.+++.+.+++++.+ ...+|+|||. |..++-.+|++.- ..+..++-+
T Consensus 93 ~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~~l 145 (202)
T cd01714 93 TLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELLGWPQITYVSKI 145 (202)
T ss_pred hHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHhCCCccceEEEE
Confidence 8889999999998877 5699999999 8888888776532 244444444
No 249
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=71.34 E-value=6 Score=33.87 Aligned_cols=33 Identities=15% Similarity=0.313 Sum_probs=27.8
Q ss_pred HHHHHHHcCCCceEEEEEChhHHHHHHHHhhCc
Q 024033 85 LITLLEENDLKSTLFIGHSMSGMIGCIASVKKP 117 (273)
Q Consensus 85 l~~~~~~~~~~~~~lvGhS~GG~ia~~~a~~~p 117 (273)
+.+.+++.|++.-.+.|-|+|+.++..+|....
T Consensus 29 Vl~aL~e~gi~~~~iaGtS~GAiva~l~A~g~~ 61 (306)
T COG1752 29 VLKALEEAGIPIDVIAGTSAGAIVAALYAAGMD 61 (306)
T ss_pred HHHHHHHcCCCccEEEecCHHHHHHHHHHcCCC
Confidence 566777788999999999999999999887533
No 250
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=71.03 E-value=6.8 Score=30.25 Aligned_cols=33 Identities=12% Similarity=0.234 Sum_probs=25.7
Q ss_pred HHHHHHHcCCCceEEEEEChhHHHHHHHHhhCc
Q 024033 85 LITLLEENDLKSTLFIGHSMSGMIGCIASVKKP 117 (273)
Q Consensus 85 l~~~~~~~~~~~~~lvGhS~GG~ia~~~a~~~p 117 (273)
+.+.+++.++..-.++|-|.|+.++..++...+
T Consensus 16 vl~aL~e~gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 16 VAKALRERGPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 445555568887799999999999988887643
No 251
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=70.30 E-value=8 Score=31.40 Aligned_cols=32 Identities=19% Similarity=0.299 Sum_probs=24.7
Q ss_pred HHHHHHHcCCCceEEEEEChhHHHHHHHHhhC
Q 024033 85 LITLLEENDLKSTLFIGHSMSGMIGCIASVKK 116 (273)
Q Consensus 85 l~~~~~~~~~~~~~lvGhS~GG~ia~~~a~~~ 116 (273)
+.+.+++.+++.-.++|-|.|+.+|..+|...
T Consensus 18 vL~aL~e~gi~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 18 FLAALLEMGLEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHHHcCCCceEEEEeCHHHHHHHHHHcCC
Confidence 34444455777778999999999999998754
No 252
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=70.12 E-value=5.6 Score=36.92 Aligned_cols=30 Identities=23% Similarity=0.179 Sum_probs=24.8
Q ss_pred HHHHH-HHcCCCceEEEEEChhHHHHHHHHh
Q 024033 85 LITLL-EENDLKSTLFIGHSMSGMIGCIASV 114 (273)
Q Consensus 85 l~~~~-~~~~~~~~~lvGhS~GG~ia~~~a~ 114 (273)
+.+++ +.+|+++-.++|||+|=+.|+..|-
T Consensus 254 La~ll~~~~GI~Pdav~GHSlGE~aAa~aAG 284 (538)
T TIGR02816 254 LTQLLCDEFAIKPDFALGYSKGEASMWASLG 284 (538)
T ss_pred HHHHHHHhcCCCCCEEeecCHHHHHHHHHhC
Confidence 44556 5789999999999999988887774
No 253
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=70.02 E-value=13 Score=30.31 Aligned_cols=39 Identities=10% Similarity=0.029 Sum_probs=26.0
Q ss_pred cHHHHHHHHHHHHHH-c-CCCceEEEEEChhHHHHHHHHhh
Q 024033 77 SYEAFADDLITLLEE-N-DLKSTLFIGHSMSGMIGCIASVK 115 (273)
Q Consensus 77 s~~~~a~~l~~~~~~-~-~~~~~~lvGhS~GG~ia~~~a~~ 115 (273)
|.++=++.+.+.+.. . ..++++++|+|.|+.++...+.+
T Consensus 28 Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 28 SVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred HHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHH
Confidence 344444555555544 1 34679999999999999776643
No 254
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=69.96 E-value=7.7 Score=32.60 Aligned_cols=31 Identities=19% Similarity=0.357 Sum_probs=25.9
Q ss_pred HHHHHHHcCCCceEEEEEChhHHHHHHHHhh
Q 024033 85 LITLLEENDLKSTLFIGHSMSGMIGCIASVK 115 (273)
Q Consensus 85 l~~~~~~~~~~~~~lvGhS~GG~ia~~~a~~ 115 (273)
+.+.+++.++.--.++|-|+|+.++..+|..
T Consensus 28 VL~aLeE~gi~~d~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 28 ILQALEEAGIPIDAIGGTSIGSFVGGLYARE 58 (269)
T ss_pred HHHHHHHcCCCccEEEEECHHHHHHHHHHcC
Confidence 5566677788877899999999999998875
No 255
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=69.46 E-value=5.2 Score=36.36 Aligned_cols=59 Identities=17% Similarity=0.101 Sum_probs=38.7
Q ss_pred CCCEEEEecCCCCccchhHHHHHHHHcC------CCeEEEEcCCCCCCCCccChHHHHHHHHHhhc
Q 024033 213 ETPCTIFQPSNDAVVPNSVAYYMQEKMK------GKSTVEIIEADGHFPQLTAHLQLIDVLNKVLG 272 (273)
Q Consensus 213 ~~P~lii~G~~D~~~~~~~~~~~~~~~~------~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 272 (273)
+.+.+...|=.|..+|+...+.--+..+ +...+.+++ +|||++.++|+...+.++.|+.
T Consensus 425 ~Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~n~~~~r~y~-aGHMvp~d~P~~~~~~~~~~~~ 489 (498)
T COG2939 425 KLKWLGASGYFDASTPFFWSRLTLEEMGGYKSYRNLTFLRIYE-AGHMVPYDRPESSLEMVNLWIN 489 (498)
T ss_pred cceEeeecchhhhcCCCcccccchhhcccccccCCceEEEEec-CcceeecCChHHHHHHHHHHHh
Confidence 4556666666677777654432222222 123445554 8999999999999999988764
No 256
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=69.19 E-value=29 Score=30.58 Aligned_cols=85 Identities=21% Similarity=0.294 Sum_probs=62.7
Q ss_pred ceEEEecCCCCC-------hhchhhhhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCC
Q 024033 22 ETLVLAHGFGGD-------QSIWDKITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDL 94 (273)
Q Consensus 22 ~~vvllHG~~~~-------~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~ 94 (273)
..||+|||-+.| .+.|..+++.+.+.-.+-.+|..=+|.-+ . +++-+..++.++...
T Consensus 172 ~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~-------------G-leeDa~~lR~~a~~~-- 235 (396)
T COG1448 172 GSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFAD-------------G-LEEDAYALRLFAEVG-- 235 (396)
T ss_pred CCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhcc-------------c-hHHHHHHHHHHHHhC--
Confidence 369999997765 47899999999987778888987766541 1 666677787777753
Q ss_pred CceEEEEEChhHHHHHHHHhhCcccccceEEeec
Q 024033 95 KSTLFIGHSMSGMIGCIASVKKPELFKRLILIGT 128 (273)
Q Consensus 95 ~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~ 128 (273)
+-.+|..|.-=..+ .|.+||-++.+++.
T Consensus 236 -~~~lva~S~SKnfg-----LYgERVGa~~vva~ 263 (396)
T COG1448 236 -PELLVASSFSKNFG-----LYGERVGALSVVAE 263 (396)
T ss_pred -CcEEEEehhhhhhh-----hhhhccceeEEEeC
Confidence 23888888764433 46789999998864
No 257
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=68.58 E-value=82 Score=27.63 Aligned_cols=83 Identities=16% Similarity=0.127 Sum_probs=52.2
Q ss_pred ceEEEecCCCCChhch-hhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcC--CCce
Q 024033 22 ETLVLAHGFGGDQSIW-DKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEEND--LKST 97 (273)
Q Consensus 22 ~~vvllHG~~~~~~~w-~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~--~~~~ 97 (273)
.+||++=||.+.-.-| .+.....++ +|.++-+-.|-+-.. . ....++.+....+.-+.+++.... ..+.
T Consensus 39 k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~--~-----~~s~~~~sl~~~~~~l~~L~~~~~~~~~pi 111 (350)
T KOG2521|consen 39 KPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVF--L-----SASRRILSLSLASTRLSELLSDYNSDPCPI 111 (350)
T ss_pred ccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccc--c-----ccccccchhhHHHHHHHHHhhhccCCcCce
Confidence 3788888998877767 445555544 888887766665332 1 111122335555566777776655 4456
Q ss_pred EEEEEChhHHHHHH
Q 024033 98 LFIGHSMSGMIGCI 111 (273)
Q Consensus 98 ~lvGhS~GG~ia~~ 111 (273)
++--.|+||...+.
T Consensus 112 ~fh~FS~ng~~~~~ 125 (350)
T KOG2521|consen 112 IFHVFSGNGVRLMY 125 (350)
T ss_pred EEEEecCCceeehH
Confidence 77789999987654
No 258
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=64.14 E-value=19 Score=25.30 Aligned_cols=84 Identities=13% Similarity=0.128 Sum_probs=53.1
Q ss_pred hchhhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCCCceEEEEEChhHH--HHHH
Q 024033 35 SIWDKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDLKSTLFIGHSMSGM--IGCI 111 (273)
Q Consensus 35 ~~w~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~~~~~lvGhS~GG~--ia~~ 111 (273)
..|..+.+.|.. +|---.+.++..|.+-... ... ..-+.=...+..+++.+.-.+++|||-|=-.= +-..
T Consensus 11 nly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~----~~~---~~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ 83 (100)
T PF09949_consen 11 NLYPFLRDFLRRNGFPAGPLLLRDYGPSLSGL----FKS---GAEEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAE 83 (100)
T ss_pred HHHHHHHHHHHhcCCCCCceEcccCCcccccc----ccC---CchhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHH
Confidence 445666777766 4666666777766552211 000 00112245677888888888999999885543 3356
Q ss_pred HHhhCcccccceEE
Q 024033 112 ASVKKPELFKRLIL 125 (273)
Q Consensus 112 ~a~~~p~~v~~lvl 125 (273)
+|.++|++|.++.+
T Consensus 84 ia~~~P~~i~ai~I 97 (100)
T PF09949_consen 84 IARRFPGRILAIYI 97 (100)
T ss_pred HHHHCCCCEEEEEE
Confidence 88899999988764
No 259
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=63.93 E-value=12 Score=30.10 Aligned_cols=33 Identities=18% Similarity=0.433 Sum_probs=26.1
Q ss_pred HHHHHHHcCCCceEEEEEChhHHHHHHHHhhCc
Q 024033 85 LITLLEENDLKSTLFIGHSMSGMIGCIASVKKP 117 (273)
Q Consensus 85 l~~~~~~~~~~~~~lvGhS~GG~ia~~~a~~~p 117 (273)
+.+.+.+.++..-.++|-|.|+++|..+|...+
T Consensus 16 vl~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 16 VLKALAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 444555567766689999999999999998775
No 260
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=63.85 E-value=5.8 Score=35.69 Aligned_cols=39 Identities=18% Similarity=0.284 Sum_probs=29.9
Q ss_pred HHHHHHHHcCCCceEEEEEChhHHHHHHHHhhCcccccc
Q 024033 84 DLITLLEENDLKSTLFIGHSMSGMIGCIASVKKPELFKR 122 (273)
Q Consensus 84 ~l~~~~~~~~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~ 122 (273)
-+...+.+.++.+-+++|-|.|+.+|..+|...++.+..
T Consensus 90 GVLkaL~E~gl~p~vIsGTSaGAivAal~as~~~eel~~ 128 (421)
T cd07230 90 GVLKALFEANLLPRIISGSSAGSIVAAILCTHTDEEIPE 128 (421)
T ss_pred HHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHHHH
Confidence 344455555788789999999999999999887766544
No 261
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=62.91 E-value=13 Score=28.85 Aligned_cols=33 Identities=18% Similarity=0.452 Sum_probs=24.6
Q ss_pred HHHHHHHcCCCceEEEEEChhHHHHHHHHhhCc
Q 024033 85 LITLLEENDLKSTLFIGHSMSGMIGCIASVKKP 117 (273)
Q Consensus 85 l~~~~~~~~~~~~~lvGhS~GG~ia~~~a~~~p 117 (273)
+.+.+++.++..-.++|-|.|+.+|..++...+
T Consensus 18 vl~~L~e~g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 18 VLRALEEEGIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHHHHCCCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 334445567766688999999999988887644
No 262
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=61.88 E-value=19 Score=28.63 Aligned_cols=62 Identities=6% Similarity=0.125 Sum_probs=39.7
Q ss_pred CCC-CCCEEEEecCCCCccchhHHH---HHHHHcCCC-eEEEEcCCCCCCCCccCh---HHHHHHHHHhh
Q 024033 210 DKV-ETPCTIFQPSNDAVVPNSVAY---YMQEKMKGK-STVEIIEADGHFPQLTAH---LQLIDVLNKVL 271 (273)
Q Consensus 210 ~~i-~~P~lii~G~~D~~~~~~~~~---~~~~~~~~~-~~~~~i~~~gH~~~~e~p---~~~~~~i~~fl 271 (273)
+.| +++.+-|-|+.|.++.+.-.. .|-..+|.. +...+.+++||+-...=+ +++...|++|+
T Consensus 130 ~aI~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi 199 (202)
T PF06850_consen 130 AAIRRTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFI 199 (202)
T ss_pred HHcccceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHH
Confidence 445 455666999999998875433 333334432 455667899998766444 45566677775
No 263
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=60.11 E-value=1.1e+02 Score=26.21 Aligned_cols=99 Identities=11% Similarity=0.218 Sum_probs=68.5
Q ss_pred ceEEEecCCCCC-hhchhhhhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCCCceEEE
Q 024033 22 ETLVLAHGFGGD-QSIWDKITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDLKSTLFI 100 (273)
Q Consensus 22 ~~vvllHG~~~~-~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~~~~~lv 100 (273)
|.||.+--..++ +...+-.++.|-....|+.-||.---.- |. ....+. +++|.+-+++.+..+|-+ ++++
T Consensus 104 PkvLivapmsGH~aTLLR~TV~alLp~~~vyitDW~dAr~V--p~-----~~G~Fd-ldDYIdyvie~~~~~Gp~-~hv~ 174 (415)
T COG4553 104 PKVLIVAPMSGHYATLLRGTVEALLPYHDVYITDWVDARMV--PL-----EAGHFD-LDDYIDYVIEMINFLGPD-AHVM 174 (415)
T ss_pred CeEEEEecccccHHHHHHHHHHHhccccceeEeecccccee--ec-----ccCCcc-HHHHHHHHHHHHHHhCCC-CcEE
Confidence 456666666555 4455778888888889999998654322 22 112355 999999999999999865 4444
Q ss_pred EE-----ChhHHHHHHHHhhCcccccceEEeecC
Q 024033 101 GH-----SMSGMIGCIASVKKPELFKRLILIGTS 129 (273)
Q Consensus 101 Gh-----S~GG~ia~~~a~~~p~~v~~lvl~~~~ 129 (273)
+- -.=+.|++..+...|..-+.+++++++
T Consensus 175 aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgP 208 (415)
T COG4553 175 AVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGP 208 (415)
T ss_pred EEecCCchHHHHHHHHHhcCCCCCCceeeeecCc
Confidence 33 234566666777788888899999874
No 264
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=58.48 E-value=19 Score=27.76 Aligned_cols=32 Identities=19% Similarity=0.376 Sum_probs=23.9
Q ss_pred HHHHHHHcCCCceEEEEEChhHHHHHHHHhhC
Q 024033 85 LITLLEENDLKSTLFIGHSMSGMIGCIASVKK 116 (273)
Q Consensus 85 l~~~~~~~~~~~~~lvGhS~GG~ia~~~a~~~ 116 (273)
+.+.+++.++..-.++|-|.|+.+|..++...
T Consensus 18 vl~~L~~~~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 18 VLKALEEAGIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHHHcCCCeeEEEEECHHHHHHHHHHcCC
Confidence 44444555766668999999999998888653
No 265
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=58.28 E-value=8.7 Score=34.11 Aligned_cols=40 Identities=18% Similarity=0.325 Sum_probs=30.8
Q ss_pred HHHHHHHcCCCceEEEEEChhHHHHHHHHhhCcccccceE
Q 024033 85 LITLLEENDLKSTLFIGHSMSGMIGCIASVKKPELFKRLI 124 (273)
Q Consensus 85 l~~~~~~~~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lv 124 (273)
+.+.+.+.|+.+-++.|-|.|+.+|..+|..-++.+..++
T Consensus 101 v~kaL~e~gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~~l 140 (391)
T cd07229 101 VVKALWLRGLLPRIITGTATGALIAALVGVHTDEELLRFL 140 (391)
T ss_pred HHHHHHHcCCCCceEEEecHHHHHHHHHHcCCHHHHHHHH
Confidence 4444555688888899999999999999987666665554
No 266
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=58.13 E-value=19 Score=33.02 Aligned_cols=44 Identities=34% Similarity=0.483 Sum_probs=31.9
Q ss_pred CCCcccccHHHHHHHHHH-HHHHcCCCceEEEEE-ChhHHHHHHHHhh
Q 024033 70 YNPVKYSSYEAFADDLIT-LLEENDLKSTLFIGH-SMSGMIGCIASVK 115 (273)
Q Consensus 70 ~~~~~~~s~~~~a~~l~~-~~~~~~~~~~~lvGh-S~GG~ia~~~a~~ 115 (273)
++-++| ++.+++|+.. +.+.++..+-.++|| |=||.+|..++.+
T Consensus 377 f~lWPy--Le~fa~d~~~~i~~e~~~~PdlI~GnYsDgnlvA~LLs~~ 422 (550)
T PF00862_consen 377 FDLWPY--LEEFADDAEREILAELQGKPDLIIGNYSDGNLVASLLSRK 422 (550)
T ss_dssp GG-GGG--HHHHHHHHHHHHHHHHTS--SEEEEEHHHHHHHHHHHHHH
T ss_pred hhchhh--HHHHHHHHHHHHHHHhCCCCcEEEeccCcchHHHHHHHhh
Confidence 344566 8999999874 567777777778887 8899998888865
No 267
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=55.29 E-value=13 Score=33.79 Aligned_cols=38 Identities=13% Similarity=0.097 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHcCCCc--eEEEEEChhHHHHHHHHhhC
Q 024033 79 EAFADDLITLLEENDLKS--TLFIGHSMSGMIGCIASVKK 116 (273)
Q Consensus 79 ~~~a~~l~~~~~~~~~~~--~~lvGhS~GG~ia~~~a~~~ 116 (273)
+.+.+-+.+.++.||.++ .+|-|-|||..=|++++++.
T Consensus 339 ~~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l 378 (511)
T TIGR03712 339 QGIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKL 378 (511)
T ss_pred HHHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccC
Confidence 345555667888898864 89999999999999999874
No 268
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=55.00 E-value=10 Score=33.90 Aligned_cols=40 Identities=20% Similarity=0.390 Sum_probs=30.4
Q ss_pred HHHHHHHcCCCceEEEEEChhHHHHHHHHhhCcccccceE
Q 024033 85 LITLLEENDLKSTLFIGHSMSGMIGCIASVKKPELFKRLI 124 (273)
Q Consensus 85 l~~~~~~~~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lv 124 (273)
+...+.+.++.+-+++|-|.|+.+|..+|...++.+..++
T Consensus 85 VlkaL~e~gllp~iI~GtSAGAivaalla~~t~~el~~~~ 124 (407)
T cd07232 85 VVKALLDADLLPNVISGTSGGSLVAALLCTRTDEELKQLL 124 (407)
T ss_pred HHHHHHhCCCCCCEEEEECHHHHHHHHHHcCCHHHHHHHH
Confidence 4444444577777899999999999999987777765554
No 269
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=54.96 E-value=23 Score=33.05 Aligned_cols=48 Identities=13% Similarity=0.293 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHcCCCceEEEEE------ChhHHHHHHHHhhCcccccceEEeec
Q 024033 78 YEAFADDLITLLEENDLKSTLFIGH------SMSGMIGCIASVKKPELFKRLILIGT 128 (273)
Q Consensus 78 ~~~~a~~l~~~~~~~~~~~~~lvGh------S~GG~ia~~~a~~~p~~v~~lvl~~~ 128 (273)
...+...+.+++.. .++++++|| ++|+.+++..-+..-.+ .+-+++++
T Consensus 323 aRvis~al~d~i~e--~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp 376 (655)
T COG3887 323 ARVISTALSDIIKE--SDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDP 376 (655)
T ss_pred HHHHHHHHHHHHhh--cCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECc
Confidence 67778888888876 679999999 89999998766655444 56777774
No 270
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=54.65 E-value=14 Score=27.24 Aligned_cols=26 Identities=23% Similarity=0.326 Sum_probs=19.2
Q ss_pred CCCceEEEecCCCCChhch--hhhhhhh
Q 024033 19 SGKETLVLAHGFGGDQSIW--DKITPVL 44 (273)
Q Consensus 19 ~~~~~vvllHG~~~~~~~w--~~~~~~L 44 (273)
+.+|.|+-+||++|.+..| +-++..|
T Consensus 50 p~KpLVlSfHG~tGtGKn~v~~liA~~l 77 (127)
T PF06309_consen 50 PRKPLVLSFHGWTGTGKNFVSRLIAEHL 77 (127)
T ss_pred CCCCEEEEeecCCCCcHHHHHHHHHHHH
Confidence 3467788899999999999 3444443
No 271
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=54.43 E-value=65 Score=26.08 Aligned_cols=58 Identities=21% Similarity=0.356 Sum_probs=37.1
Q ss_pred ceEEEecCCCCChhc-hhhhhhhhhc-Cc-eEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCCCceE
Q 024033 22 ETLVLAHGFGGDQSI-WDKITPVLSQ-HY-RVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDLKSTL 98 (273)
Q Consensus 22 ~~vvllHG~~~~~~~-w~~~~~~L~~-~~-~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~~~~~ 98 (273)
..|++.||-..++.. |..+-..|.+ +| .|+.--.-| |. .++++++.++..+++.++
T Consensus 139 ~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~-----------------yP----~~d~vi~~l~~~~~~~v~ 197 (265)
T COG4822 139 ILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEG-----------------YP----LVDTVIEYLRKNGIKEVH 197 (265)
T ss_pred EEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecC-----------------CC----cHHHHHHHHHHcCCceEE
Confidence 468899998877644 4555555555 56 454433323 22 155788888888988887
Q ss_pred EE
Q 024033 99 FI 100 (273)
Q Consensus 99 lv 100 (273)
|+
T Consensus 198 L~ 199 (265)
T COG4822 198 LI 199 (265)
T ss_pred Ee
Confidence 76
No 272
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=53.82 E-value=25 Score=30.20 Aligned_cols=19 Identities=21% Similarity=0.260 Sum_probs=16.2
Q ss_pred EEEEEChhHHHHHHHHhhC
Q 024033 98 LFIGHSMSGMIGCIASVKK 116 (273)
Q Consensus 98 ~lvGhS~GG~ia~~~a~~~ 116 (273)
.++|-|+||.||..++..+
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 5779999999999998643
No 273
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=53.07 E-value=12 Score=32.22 Aligned_cols=36 Identities=19% Similarity=0.368 Sum_probs=26.7
Q ss_pred HHHHHHHcCCCceEEEEEChhHHHHHHHHhhCcccc
Q 024033 85 LITLLEENDLKSTLFIGHSMSGMIGCIASVKKPELF 120 (273)
Q Consensus 85 l~~~~~~~~~~~~~lvGhS~GG~ia~~~a~~~p~~v 120 (273)
+.+.+.+.++.+-++.|-|.|+.+|..++...++.+
T Consensus 86 VlkaL~e~gl~p~~i~GsSaGAivaa~~~~~t~~El 121 (323)
T cd07231 86 VVRTLVEHQLLPRVIAGSSVGSIVCAIIATRTDEEL 121 (323)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHH
Confidence 444444558888889999999999998887554433
No 274
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=52.56 E-value=32 Score=28.59 Aligned_cols=36 Identities=14% Similarity=0.135 Sum_probs=26.0
Q ss_pred HHHHHHHHcCCC-ceEEEEEChhHHHHHHHHhhCccc
Q 024033 84 DLITLLEENDLK-STLFIGHSMSGMIGCIASVKKPEL 119 (273)
Q Consensus 84 ~l~~~~~~~~~~-~~~lvGhS~GG~ia~~~a~~~p~~ 119 (273)
-+.+.+.+.++. -=.++|-|.|+.+|..++...+.+
T Consensus 15 Gvl~al~e~~~~~fd~i~GtSaGAi~a~~~~~g~~~~ 51 (266)
T cd07208 15 GVLDAFLEAGIRPFDLVIGVSAGALNAASYLSGQRGR 51 (266)
T ss_pred HHHHHHHHcCCCCCCEEEEECHHHHhHHHHHhCCcch
Confidence 344444555666 448899999999999988876554
No 275
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=50.09 E-value=17 Score=29.49 Aligned_cols=28 Identities=18% Similarity=0.186 Sum_probs=23.0
Q ss_pred CCCEEEEecCCCCccchhHHHHHHHHcC
Q 024033 213 ETPCTIFQPSNDAVVPNSVAYYMQEKMK 240 (273)
Q Consensus 213 ~~P~lii~G~~D~~~~~~~~~~~~~~~~ 240 (273)
..|++++||+.|.++.+...+.+.+.+.
T Consensus 169 ~~P~~v~hG~~D~tV~~~n~~~~~~q~~ 196 (220)
T PF10503_consen 169 GYPRIVFHGTADTTVNPQNADQLVAQWL 196 (220)
T ss_pred CCCEEEEecCCCCccCcchHHHHHHHHH
Confidence 3699999999999999988777766543
No 276
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=49.99 E-value=1.1e+02 Score=27.85 Aligned_cols=115 Identities=14% Similarity=0.063 Sum_probs=64.5
Q ss_pred cccceEEec-----CCCceEEEecCCCCChhch---hhhhhhhh---------------cCceEEEEecC-CCccccCCC
Q 024033 10 AAMNAKIIG-----SGKETLVLAHGFGGDQSIW---DKITPVLS---------------QHYRVLAFDWL-FSGAILNKD 65 (273)
Q Consensus 10 ~~~~~~~~G-----~~~~~vvllHG~~~~~~~w---~~~~~~L~---------------~~~~via~D~~-G~G~S~~~~ 65 (273)
..|+|...- ..+|.||.|-|-+++++.- .++.|.-- +-..++-+|.| |-|.|=.-+
T Consensus 57 ~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~ 136 (454)
T KOG1282|consen 57 RQLFYWFFESENNPETDPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQPVGVGFSYSNT 136 (454)
T ss_pred ceEEEEEEEccCCCCCCCEEEEeCCCCCccchhhhhhhcCCeEEcCCCCcceeCCccccccccEEEEecCCcCCccccCC
Confidence 345555442 2357889999987766433 34433321 12368888884 777771111
Q ss_pred CCCCCCCcccccHHHHHHHHHHHHHH----c---CCCceEEEEEChhHHHHHHHH----hhCc------ccccceEEeec
Q 024033 66 HQSLYNPVKYSSYEAFADDLITLLEE----N---DLKSTLFIGHSMSGMIGCIAS----VKKP------ELFKRLILIGT 128 (273)
Q Consensus 66 ~~~~~~~~~~~s~~~~a~~l~~~~~~----~---~~~~~~lvGhS~GG~ia~~~a----~~~p------~~v~~lvl~~~ 128 (273)
.+.+. ++-+..|+|..+++.+ + .-.++.+.|-|.+|...=++| ..+. -.++++++-++
T Consensus 137 -~~~~~----~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg 211 (454)
T KOG1282|consen 137 -SSDYK----TGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNG 211 (454)
T ss_pred -CCcCc----CCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCc
Confidence 00111 2355556666665543 2 335799999999996543333 3321 24577777665
Q ss_pred C
Q 024033 129 S 129 (273)
Q Consensus 129 ~ 129 (273)
.
T Consensus 212 ~ 212 (454)
T KOG1282|consen 212 L 212 (454)
T ss_pred c
Confidence 3
No 277
>COG0218 Predicted GTPase [General function prediction only]
Probab=46.69 E-value=32 Score=27.43 Aligned_cols=13 Identities=15% Similarity=-0.136 Sum_probs=11.3
Q ss_pred EEEEecCCCcccc
Q 024033 50 VLAFDWLFSGAIL 62 (273)
Q Consensus 50 via~D~~G~G~S~ 62 (273)
+...|+||||+..
T Consensus 72 ~~lVDlPGYGyAk 84 (200)
T COG0218 72 LRLVDLPGYGYAK 84 (200)
T ss_pred EEEEeCCCccccc
Confidence 7789999999983
No 278
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=46.17 E-value=20 Score=29.79 Aligned_cols=15 Identities=27% Similarity=0.656 Sum_probs=12.3
Q ss_pred CCCceEEEEEChhHH
Q 024033 93 DLKSTLFIGHSMSGM 107 (273)
Q Consensus 93 ~~~~~~lvGhS~GG~ 107 (273)
+++.++++|||+|..
T Consensus 233 ~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEV 247 (270)
T ss_pred CCCEEEEEeCCCchh
Confidence 457799999999964
No 279
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=44.83 E-value=71 Score=24.34 Aligned_cols=50 Identities=24% Similarity=0.248 Sum_probs=32.2
Q ss_pred hhhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCCCc-eEEEEEChhH
Q 024033 39 KITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDLKS-TLFIGHSMSG 106 (273)
Q Consensus 39 ~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~~~-~~lvGhS~GG 106 (273)
.+.+.+.++-.|+++|.+|= . ++ -+.+|+.+..+-+ .| .+ +++||=|.|=
T Consensus 59 ~il~~i~~~~~vi~Ld~~Gk-----~----------~s-Se~fA~~l~~~~~-~G-~~i~f~IGG~~Gl 109 (155)
T COG1576 59 AILAAIPKGSYVVLLDIRGK-----A----------LS-SEEFADFLERLRD-DG-RDISFLIGGADGL 109 (155)
T ss_pred HHHHhcCCCCeEEEEecCCC-----c----------CC-hHHHHHHHHHHHh-cC-CeEEEEEeCcccC
Confidence 45666777889999999882 2 12 4555655555443 34 44 5777888873
No 280
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=44.26 E-value=31 Score=29.65 Aligned_cols=22 Identities=23% Similarity=0.311 Sum_probs=18.2
Q ss_pred CCCceEEEEEChhHHHHHHHHh
Q 024033 93 DLKSTLFIGHSMSGMIGCIASV 114 (273)
Q Consensus 93 ~~~~~~lvGhS~GG~ia~~~a~ 114 (273)
+.++..+.|||+|=+.|+..+.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 4677899999999888877664
No 281
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=43.10 E-value=44 Score=27.34 Aligned_cols=35 Identities=17% Similarity=0.238 Sum_probs=25.4
Q ss_pred HHHHHHHHcCCCc--eEEEEEChhHHHHHHHHhhCcc
Q 024033 84 DLITLLEENDLKS--TLFIGHSMSGMIGCIASVKKPE 118 (273)
Q Consensus 84 ~l~~~~~~~~~~~--~~lvGhS~GG~ia~~~a~~~p~ 118 (273)
-+.+.+.+.++.+ -.++|-|.|++++..++...+.
T Consensus 16 GVl~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~~ 52 (233)
T cd07224 16 GVLSLLIEAGVINETTPLAGASAGSLAAACSASGLSP 52 (233)
T ss_pred HHHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCCH
Confidence 3455555567653 4799999999999998876543
No 282
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=42.57 E-value=38 Score=28.92 Aligned_cols=35 Identities=20% Similarity=0.323 Sum_probs=25.1
Q ss_pred HHHHHHHcCCCceEEEEEChhHHHHHHHHhhCccc
Q 024033 85 LITLLEENDLKSTLFIGHSMSGMIGCIASVKKPEL 119 (273)
Q Consensus 85 l~~~~~~~~~~~~~lvGhS~GG~ia~~~a~~~p~~ 119 (273)
+.+.+.+.++.+-++.|-|.|+.+|..++....+.
T Consensus 87 vl~aL~e~~l~~~~i~GtSaGAi~aa~~~~~~~~E 121 (298)
T cd07206 87 VVKALWEQDLLPRVISGSSAGAIVAALLGTHTDEE 121 (298)
T ss_pred HHHHHHHcCCCCCEEEEEcHHHHHHHHHHcCCcHH
Confidence 33333345777778999999999999888654433
No 283
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=41.94 E-value=1.2e+02 Score=21.40 Aligned_cols=73 Identities=19% Similarity=0.175 Sum_probs=44.8
Q ss_pred eEEEecCCCCChhchhhhhhhhhcC--ceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCCCceEEE
Q 024033 23 TLVLAHGFGGDQSIWDKITPVLSQH--YRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDLKSTLFI 100 (273)
Q Consensus 23 ~vvllHG~~~~~~~w~~~~~~L~~~--~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~~~~~lv 100 (273)
.||.-|| .-+.........+... ..+.++++.- + .+++++.+.+.+.+++.+-+.-+++
T Consensus 2 iii~sHG--~~A~g~~~~~~~i~G~~~~~i~~~~~~~-------~----------~~~~~~~~~l~~~i~~~~~~~~vli 62 (116)
T PF03610_consen 2 IIIASHG--SLAEGLLESAEMILGEDQDNIEAVDLYP-------D----------ESIEDFEEKLEEAIEELDEGDGVLI 62 (116)
T ss_dssp EEEEEET--THHHHHHHHHHHHHTSTCSSEEEEEETT-------T----------SCHHHHHHHHHHHHHHCCTTSEEEE
T ss_pred EEEEECc--HHHHHHHHHHHHHcCCCcccEEEEECcC-------C----------CCHHHHHHHHHHHHHhccCCCcEEE
Confidence 4788899 3355555555555443 4777776421 1 2488899999999988864554455
Q ss_pred EEChhHHHHHHHHh
Q 024033 101 GHSMSGMIGCIASV 114 (273)
Q Consensus 101 GhS~GG~ia~~~a~ 114 (273)
=-+++|......+.
T Consensus 63 l~Dl~ggsp~n~a~ 76 (116)
T PF03610_consen 63 LTDLGGGSPFNEAA 76 (116)
T ss_dssp EESSTTSHHHHHHH
T ss_pred EeeCCCCccchHHH
Confidence 45555555444443
No 284
>COG3621 Patatin [General function prediction only]
Probab=40.81 E-value=49 Score=28.69 Aligned_cols=38 Identities=16% Similarity=0.214 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHcCC----CceEEE-EEChhHHHHHHHHhhCcc
Q 024033 81 FADDLITLLEENDL----KSTLFI-GHSMSGMIGCIASVKKPE 118 (273)
Q Consensus 81 ~a~~l~~~~~~~~~----~~~~lv-GhS~GG~ia~~~a~~~p~ 118 (273)
+..++...+++... +.+.|+ |.|.||.+++.+|+..+.
T Consensus 23 i~lE~lr~ieqiqGkkl~e~FDl~~GTSiGgilal~La~~ks~ 65 (394)
T COG3621 23 ILLEKLRIIEQIQGKKLCEYFDLIGGTSIGGILALGLALGKSP 65 (394)
T ss_pred HHHHHHHHHHHHhCCcceeeEeeecCccHHHHHHHHHhcCCCC
Confidence 44556666666322 335555 999999999999986554
No 285
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=40.65 E-value=30 Score=28.58 Aligned_cols=36 Identities=19% Similarity=0.283 Sum_probs=24.2
Q ss_pred HHHHHHHcCCC---ce-EEEEEChhHHHHHHHHhhCccccc
Q 024033 85 LITLLEENDLK---ST-LFIGHSMSGMIGCIASVKKPELFK 121 (273)
Q Consensus 85 l~~~~~~~~~~---~~-~lvGhS~GG~ia~~~a~~~p~~v~ 121 (273)
+.+.+.+.++. ++ .++|-|.|+.+|..++. .|+++.
T Consensus 17 Vl~~L~e~g~~l~~~~~~i~GtSaGAl~aa~~a~-~~~~~~ 56 (246)
T cd07222 17 AAKALLRHGKKLLKRVKRFAGASAGSLVAAVLLT-APEKIE 56 (246)
T ss_pred HHHHHHHcCchhhccCCEEEEECHHHHHHHHHhc-ChHHHH
Confidence 34444445653 34 79999999999999983 455443
No 286
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=39.78 E-value=36 Score=27.02 Aligned_cols=56 Identities=11% Similarity=0.056 Sum_probs=32.2
Q ss_pred cccCCC-CCCEEEEecCCCCccchhHHHHHHHHcCCCeEEEEcCCCCCCCCccChHHHHHHHHHh
Q 024033 207 EILDKV-ETPCTIFQPSNDAVVPNSVAYYMQEKMKGKSTVEIIEADGHFPQLTAHLQLIDVLNKV 270 (273)
Q Consensus 207 ~~l~~i-~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~f 270 (273)
+.+.++ ..|+++|+|+++.-.. +..+.+ + ..+++.+| +||..--+ -+++.+.|.+-
T Consensus 132 pei~~l~~~~v~CiyG~~E~d~~---cp~l~~--~-~~~~i~lp-GgHHfd~d-y~~La~~Il~~ 188 (192)
T PF06057_consen 132 PEIAKLPPAPVQCIYGEDEDDSL---CPSLRQ--P-GVEVIALP-GGHHFDGD-YDALAKRILDA 188 (192)
T ss_pred HHHHhCCCCeEEEEEcCCCCCCc---CccccC--C-CcEEEEcC-CCcCCCCC-HHHHHHHHHHH
Confidence 344455 3599999999765311 112222 3 24777888 57876554 55556555443
No 287
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=38.05 E-value=67 Score=29.49 Aligned_cols=59 Identities=14% Similarity=0.165 Sum_probs=37.9
Q ss_pred CCCEEEEecCCCCccchhHHHHHHHH----cCC-------CeEEEEcCCCCCCCCcc--ChHHHHHHHHHhh
Q 024033 213 ETPCTIFQPSNDAVVPNSVAYYMQEK----MKG-------KSTVEIIEADGHFPQLT--AHLQLIDVLNKVL 271 (273)
Q Consensus 213 ~~P~lii~G~~D~~~~~~~~~~~~~~----~~~-------~~~~~~i~~~gH~~~~e--~p~~~~~~i~~fl 271 (273)
-=-.++.||..|.++|+.....+.+. .++ ..++..+|+.+|+--=. .+-.....|.+|.
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WV 424 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWV 424 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHH
Confidence 44578899999999998765444332 221 25788999999986433 2223444555554
No 288
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=37.72 E-value=34 Score=29.72 Aligned_cols=28 Identities=14% Similarity=0.100 Sum_probs=19.6
Q ss_pred HHHHHcCCCc------eEEEEEChhHHHHHHHHh
Q 024033 87 TLLEENDLKS------TLFIGHSMSGMIGCIASV 114 (273)
Q Consensus 87 ~~~~~~~~~~------~~lvGhS~GG~ia~~~a~ 114 (273)
+.+...|+.+ ..++|||+|=+.|+.++-
T Consensus 110 ~~l~~~g~~~~~~~~~~~~~GHSlGE~aA~~~AG 143 (343)
T PLN02752 110 EKLRARDGGQAVIDSVDVCAGLSLGEYTALVFAG 143 (343)
T ss_pred HHHHhcCCCcccccCCCeeeeccHHHHHHHHHhC
Confidence 4455666432 357999999988888773
No 289
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=37.48 E-value=12 Score=32.57 Aligned_cols=33 Identities=27% Similarity=0.413 Sum_probs=23.5
Q ss_pred cCCCceEEEEEChhHHH-HHHHHhhCcccccceEEeec
Q 024033 92 NDLKSTLFIGHSMSGMI-GCIASVKKPELFKRLILIGT 128 (273)
Q Consensus 92 ~~~~~~~lvGhS~GG~i-a~~~a~~~p~~v~~lvl~~~ 128 (273)
-..++++|+|+|+|+|| |+....+.|-. |.+|+
T Consensus 124 ~~~~hfTllgQaigsmIl~~Eai~r~~Pd----i~IDt 157 (465)
T KOG1387|consen 124 STWKHFTLLGQAIGSMILAFEAIIRFPPD----IFIDT 157 (465)
T ss_pred ccccceehHHHHHHHHHHHHHHHHhCCch----heEec
Confidence 34567999999999998 46666666643 45665
No 290
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=36.82 E-value=70 Score=24.42 Aligned_cols=51 Identities=20% Similarity=0.223 Sum_probs=32.0
Q ss_pred hhhhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCCCc-eEEEEEChh
Q 024033 38 DKITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDLKS-TLFIGHSMS 105 (273)
Q Consensus 38 ~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~~~-~~lvGhS~G 105 (273)
..+...+.++-.+|++|-.|-- ++ -+++|+-+...... |.++ +++||=|.|
T Consensus 58 ~~il~~i~~~~~~i~Ld~~Gk~---------------~s-S~~fA~~l~~~~~~-g~~~i~F~IGG~~G 109 (155)
T PF02590_consen 58 ERILKKIPPNDYVILLDERGKQ---------------LS-SEEFAKKLERWMNQ-GKSDIVFIIGGADG 109 (155)
T ss_dssp HHHHCTSHTTSEEEEE-TTSEE------------------HHHHHHHHHHHHHT-TS-EEEEEE-BTTB
T ss_pred HHHHhhccCCCEEEEEcCCCcc---------------CC-hHHHHHHHHHHHhc-CCceEEEEEecCCC
Confidence 4455666677789999988732 23 56677777776664 4334 688899988
No 291
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=36.49 E-value=45 Score=32.37 Aligned_cols=30 Identities=23% Similarity=0.426 Sum_probs=21.9
Q ss_pred HHHHHH---HcCCCceEEEEEChhHHHHHHHHh
Q 024033 85 LITLLE---ENDLKSTLFIGHSMSGMIGCIASV 114 (273)
Q Consensus 85 l~~~~~---~~~~~~~~lvGhS~GG~ia~~~a~ 114 (273)
+++.++ ..++.--+++|.|+||+++..+|.
T Consensus 53 l~~~l~~~~~~~~~~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 53 LLELLGAHLRLRVRVDVISGTSAGGINGVLLAY 85 (739)
T ss_pred HHHHhhhhhccCCCCceEEeeCHHHHHHHHHHc
Confidence 444443 335555689999999999988886
No 292
>TIGR02883 spore_cwlD N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect.
Probab=36.16 E-value=73 Score=25.02 Aligned_cols=44 Identities=16% Similarity=0.105 Sum_probs=22.6
Q ss_pred eEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCC
Q 024033 49 RVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDL 94 (273)
Q Consensus 49 ~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~ 94 (273)
++|++| ||||.++. ...+.....+..=--+++..+.+.|++.|.
T Consensus 1 k~I~iD-pGHGg~d~-GA~~~~g~~E~~~~l~ia~~l~~~L~~~G~ 44 (189)
T TIGR02883 1 KIIVID-PGHGGIDG-GAVGKDGTLEKDITLEIALKLKDYLQEQGA 44 (189)
T ss_pred CEEEEe-CCCCCCCC-CCCCCCCccHHHHHHHHHHHHHHHHHhCCC
Confidence 367777 79998843 221110011111022566667777777664
No 293
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=35.79 E-value=1.6e+02 Score=25.64 Aligned_cols=89 Identities=18% Similarity=0.222 Sum_probs=57.0
Q ss_pred CceEEEecCCCCC-h---hchhhhhhh---hhc-------CceEEEEec-CCCccccCCCCCCCCCCccc-ccHHHHHHH
Q 024033 21 KETLVLAHGFGGD-Q---SIWDKITPV---LSQ-------HYRVLAFDW-LFSGAILNKDHQSLYNPVKY-SSYEAFADD 84 (273)
Q Consensus 21 ~~~vvllHG~~~~-~---~~w~~~~~~---L~~-------~~~via~D~-~G~G~S~~~~~~~~~~~~~~-~s~~~~a~~ 84 (273)
+|..+.+.|-++. + ..|+++.|. ++. .-.++.+|- .|.|.| .-+ ....| ++.+.++.|
T Consensus 31 ~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~adllfvDnPVGaGfS-yVd-----g~~~Y~~~~~qia~D 104 (414)
T KOG1283|consen 31 RPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKDADLLFVDNPVGAGFS-YVD-----GSSAYTTNNKQIALD 104 (414)
T ss_pred CCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhhccEEEecCCCcCcee-eec-----CcccccccHHHHHHH
Confidence 4556778876543 3 345555543 121 134666665 588888 211 11223 358899999
Q ss_pred HHHHHHHc-------CCCceEEEEEChhHHHHHHHHhh
Q 024033 85 LITLLEEN-------DLKSTLFIGHSMSGMIGCIASVK 115 (273)
Q Consensus 85 l~~~~~~~-------~~~~~~lvGhS~GG~ia~~~a~~ 115 (273)
+.++++.+ .-.+.+++.-|.||-.|..++..
T Consensus 105 l~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~ 142 (414)
T KOG1283|consen 105 LVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALE 142 (414)
T ss_pred HHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhh
Confidence 99999864 23478999999999998877754
No 294
>COG3933 Transcriptional antiterminator [Transcription]
Probab=35.79 E-value=2.3e+02 Score=25.80 Aligned_cols=75 Identities=21% Similarity=0.304 Sum_probs=56.6
Q ss_pred ceEEEecCCCCChhchhhhhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCCCceEEEE
Q 024033 22 ETLVLAHGFGGDQSIWDKITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDLKSTLFIG 101 (273)
Q Consensus 22 ~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~~~~~lvG 101 (273)
..||+-||... +++--.++..|-+.--++++|+|= + -+..+..+.+.+.+++.+..+=.++=
T Consensus 110 ~vIiiAHG~sT-ASSmaevanrLL~~~~~~aiDMPL-------d----------vsp~~vle~l~e~~k~~~~~~GlllL 171 (470)
T COG3933 110 KVIIIAHGYST-ASSMAEVANRLLGEEIFIAIDMPL-------D----------VSPSDVLEKLKEYLKERDYRSGLLLL 171 (470)
T ss_pred eEEEEecCcch-HHHHHHHHHHHhhccceeeecCCC-------c----------CCHHHHHHHHHHHHHhcCccCceEEE
Confidence 47899999876 445566677776666788999754 1 24888899999999999888867777
Q ss_pred EChhHHHHHHHHh
Q 024033 102 HSMSGMIGCIASV 114 (273)
Q Consensus 102 hS~GG~ia~~~a~ 114 (273)
-+||...+..=..
T Consensus 172 VDMGSL~~f~~~i 184 (470)
T COG3933 172 VDMGSLTSFGSII 184 (470)
T ss_pred EecchHHHHHHHH
Confidence 8999988655443
No 295
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=35.72 E-value=63 Score=26.71 Aligned_cols=21 Identities=19% Similarity=0.341 Sum_probs=17.8
Q ss_pred eEEEEEChhHHHHHHHHhhCc
Q 024033 97 TLFIGHSMSGMIGCIASVKKP 117 (273)
Q Consensus 97 ~~lvGhS~GG~ia~~~a~~~p 117 (273)
-.+.|-|.|+.+|..++...+
T Consensus 32 d~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 32 NKISGASAGALAACCLLCDLP 52 (245)
T ss_pred CeEEEEcHHHHHHHHHHhCCc
Confidence 349999999999999887654
No 296
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=35.18 E-value=38 Score=37.93 Aligned_cols=29 Identities=21% Similarity=0.343 Sum_probs=24.3
Q ss_pred HHHHHHHcCCCceEEEEEChhHHHHHHHH
Q 024033 85 LITLLEENDLKSTLFIGHSMSGMIGCIAS 113 (273)
Q Consensus 85 l~~~~~~~~~~~~~lvGhS~GG~ia~~~a 113 (273)
+.+++.++|+.+-.++|||+|=+.|+.+|
T Consensus 664 l~~lL~~~Gi~Pd~v~GHSlGE~aAa~aA 692 (2582)
T TIGR02813 664 QYKLFTQAGFKADMTAGHSFGELSALCAA 692 (2582)
T ss_pred HHHHHHHcCCccceeecCCHHHHHHHHHh
Confidence 45667788999999999999998887765
No 297
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=35.11 E-value=67 Score=26.45 Aligned_cols=35 Identities=14% Similarity=0.220 Sum_probs=24.1
Q ss_pred HHHHHHHcCCC--c--eEEEEEChhHHHHHHHHhhCc-cc
Q 024033 85 LITLLEENDLK--S--TLFIGHSMSGMIGCIASVKKP-EL 119 (273)
Q Consensus 85 l~~~~~~~~~~--~--~~lvGhS~GG~ia~~~a~~~p-~~ 119 (273)
+.+.+.+.++. + -.++|-|.|+.+|..++...+ +.
T Consensus 17 Vl~~L~e~g~~l~~~~~~i~GtSAGAl~aa~~a~g~~~~~ 56 (243)
T cd07204 17 VASALREHAPRLLQNARRIAGASAGAIVAAVVLCGVSMEE 56 (243)
T ss_pred HHHHHHHcCcccccCCCEEEEEcHHHHHHHHHHhCCCHHH
Confidence 34444444544 2 389999999999999888654 44
No 298
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=35.08 E-value=2.1e+02 Score=24.23 Aligned_cols=16 Identities=38% Similarity=0.648 Sum_probs=11.6
Q ss_pred CCceEEEEEChhHHHH
Q 024033 94 LKSTLFIGHSMSGMIG 109 (273)
Q Consensus 94 ~~~~~lvGhS~GG~ia 109 (273)
+...+|+|+|-=.+++
T Consensus 210 lg~Pilvg~SRKsfig 225 (282)
T PRK11613 210 FNLPLLVGMSRKSMIG 225 (282)
T ss_pred CCCCEEEEecccHHHH
Confidence 3568999999666554
No 299
>PRK02399 hypothetical protein; Provisional
Probab=34.22 E-value=3.4e+02 Score=24.37 Aligned_cols=103 Identities=15% Similarity=0.106 Sum_probs=65.0
Q ss_pred EEecCCCCC-hhchhhhhhhhhc-CceEEEEecCCCccccC-CCC-------------CCCCCC-cccccHHHHHHHHHH
Q 024033 25 VLAHGFGGD-QSIWDKITPVLSQ-HYRVLAFDWLFSGAILN-KDH-------------QSLYNP-VKYSSYEAFADDLIT 87 (273)
Q Consensus 25 vllHG~~~~-~~~w~~~~~~L~~-~~~via~D~~G~G~S~~-~~~-------------~~~~~~-~~~~s~~~~a~~l~~ 87 (273)
|+|=|-.++ ......+...+.+ +.+|+.+|.-..|.... ++. ...... .+-..++.+++.+..
T Consensus 6 I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~~ 85 (406)
T PRK02399 6 IYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAAA 85 (406)
T ss_pred EEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHHH
Confidence 444465555 3666777777766 78999999844431100 100 000000 011125666666666
Q ss_pred HHHHc----CCCceEEEEEChhHHHHHHHHhhCcccccceEEee
Q 024033 88 LLEEN----DLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIG 127 (273)
Q Consensus 88 ~~~~~----~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~ 127 (273)
++..+ .+.-++-+|=|.|..++...+...|=-+-|+++.-
T Consensus 86 ~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPiG~PKlmVST 129 (406)
T PRK02399 86 FVRELYERGDVAGVIGLGGSGGTALATPAMRALPIGVPKLMVST 129 (406)
T ss_pred HHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCCCCCeEEEEc
Confidence 66542 36678999999999999999999998888888644
No 300
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=33.90 E-value=47 Score=28.39 Aligned_cols=17 Identities=12% Similarity=0.311 Sum_probs=15.2
Q ss_pred EEEEEChhHHHHHHHHh
Q 024033 98 LFIGHSMSGMIGCIASV 114 (273)
Q Consensus 98 ~lvGhS~GG~ia~~~a~ 114 (273)
.++|-|.||.||+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 57799999999999886
No 301
>PRK06029 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Provisional
Probab=32.75 E-value=1.7e+02 Score=23.13 Aligned_cols=61 Identities=11% Similarity=-0.029 Sum_probs=36.2
Q ss_pred ceEEEecCCCCChhchhhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHH-HHHHHcCCCc
Q 024033 22 ETLVLAHGFGGDQSIWDKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLI-TLLEENDLKS 96 (273)
Q Consensus 22 ~~vvllHG~~~~~~~w~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~-~~~~~~~~~~ 96 (273)
.++++.+--+.....=.+++..|++ ++.|+-|. +|+-. +| .|++++++-+. .+++.+|++.
T Consensus 116 ~pvii~P~~M~~~p~~~~Nl~~L~~~G~~vi~P~-~g~~a--~p-----------~~~~~~~~~~v~~~~~~l~~~~ 178 (185)
T PRK06029 116 RRLVLCVRETPLHLGHLRNMTKLAEMGAIIMPPV-PAFYH--RP-----------QTLEDMVDQTVGRVLDLFGIEH 178 (185)
T ss_pred CCEEEEeccccCCHHHHHHHHHHHHCcCEEECCC-ccccc--CC-----------CCHHHHHHHHHHHHHHhcCCCC
Confidence 3577777322112222466777887 56666543 34321 22 25999999877 5889999874
No 302
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=32.64 E-value=82 Score=23.79 Aligned_cols=29 Identities=21% Similarity=0.256 Sum_probs=20.8
Q ss_pred HHHHHHHcCC--CceEEEEEChhHHHHHHHH
Q 024033 85 LITLLEENDL--KSTLFIGHSMSGMIGCIAS 113 (273)
Q Consensus 85 l~~~~~~~~~--~~~~lvGhS~GG~ia~~~a 113 (273)
+.+.+++.++ .--.+.|-|.|+.++..++
T Consensus 16 vl~~l~~~~~~~~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 16 VLSALAERGLLDCVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHHHhCCccCCCEEEEEcHHHHHHHHHh
Confidence 3444444455 4457889999999998888
No 303
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=32.63 E-value=1.7e+02 Score=23.84 Aligned_cols=68 Identities=10% Similarity=0.177 Sum_probs=34.1
Q ss_pred hhhhhhhhcCce-EEEEecCCCccccCCCCCCCCCC--cccccHHHHHHHHHHHHHHcCCCceEEEEEChhHHH
Q 024033 38 DKITPVLSQHYR-VLAFDWLFSGAILNKDHQSLYNP--VKYSSYEAFADDLITLLEENDLKSTLFIGHSMSGMI 108 (273)
Q Consensus 38 ~~~~~~L~~~~~-via~D~~G~G~S~~~~~~~~~~~--~~~~s~~~~a~~l~~~~~~~~~~~~~lvGhS~GG~i 108 (273)
..+....++... ++..--.-+|.|.... +.... -+..++..+..|+.+-+.+.|.++++++-.- ||..
T Consensus 43 ~~~a~~~a~~~~~~lv~P~i~yG~s~~h~--~fpGTisl~~~t~~~~l~di~~sl~~~Gf~~ivivngH-gGN~ 113 (237)
T PF02633_consen 43 EAVAERAAERLGEALVLPPIPYGCSPHHM--GFPGTISLSPETLIALLRDILRSLARHGFRRIVIVNGH-GGNI 113 (237)
T ss_dssp HHHHHHHHHHHTHEEE---B--BB-GCCT--TSTT-BBB-HHHHHHHHHHHHHHHHHHT--EEEEEESS-TTHH
T ss_pred HHHHHHHHHHCCcEEEeCCCccccCcccC--CCCCeEEeCHHHHHHHHHHHHHHHHHcCCCEEEEEECC-HhHH
Confidence 455666666444 6666666778773221 11111 1234588888888888888899998777333 3344
No 304
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=32.48 E-value=43 Score=30.15 Aligned_cols=40 Identities=15% Similarity=0.106 Sum_probs=23.6
Q ss_pred CCEEEEecCCCCccchhHHHHHHHHcCCCeEEEEcCCCCCCCCc
Q 024033 214 TPCTIFQPSNDAVVPNSVAYYMQEKMKGKSTVEIIEADGHFPQL 257 (273)
Q Consensus 214 ~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~ 257 (273)
.-++++.|+.|++...... +.........+|++++|+.=+
T Consensus 377 tnviFtNG~~DPW~~lgv~----~~~~~~~~~~~I~g~~Hc~Dl 416 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALGVT----SDSSDSVPAIVIPGGAHCSDL 416 (434)
T ss_dssp -SEEEEEETT-CCGGGS------S-SSSSEEEEEETT--TTGGG
T ss_pred CeEEeeCCCCCCcccccCC----CCCCCCcccEEECCCeeeccc
Confidence 4689999999999766522 223323456789999998633
No 305
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=32.35 E-value=2.5e+02 Score=22.17 Aligned_cols=71 Identities=17% Similarity=0.111 Sum_probs=45.8
Q ss_pred hhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCCCceEEEEEChhHHHHHHHHhhCcc
Q 024033 40 ITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDLKSTLFIGHSMSGMIGCIASVKKPE 118 (273)
Q Consensus 40 ~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~~~~~lvGhS~GG~ia~~~a~~~p~ 118 (273)
....+.+ ++++|.+|=+|.... -.+..+++.++++......++||=-+..+.-.+..+..+-+
T Consensus 75 ~l~~~~~~~~D~vlIDT~Gr~~~----------------d~~~~~el~~~~~~~~~~~~~LVlsa~~~~~~~~~~~~~~~ 138 (196)
T PF00448_consen 75 ALEKFRKKGYDLVLIDTAGRSPR----------------DEELLEELKKLLEALNPDEVHLVLSATMGQEDLEQALAFYE 138 (196)
T ss_dssp HHHHHHHTTSSEEEEEE-SSSST----------------HHHHHHHHHHHHHHHSSSEEEEEEEGGGGGHHHHHHHHHHH
T ss_pred HHHHHhhcCCCEEEEecCCcchh----------------hHHHHHHHHHHhhhcCCccceEEEecccChHHHHHHHHHhh
Confidence 3344443 699999999885321 34456777788877766678888777777776655544322
Q ss_pred --cccceEEe
Q 024033 119 --LFKRLILI 126 (273)
Q Consensus 119 --~v~~lvl~ 126 (273)
.+.++|+-
T Consensus 139 ~~~~~~lIlT 148 (196)
T PF00448_consen 139 AFGIDGLILT 148 (196)
T ss_dssp HSSTCEEEEE
T ss_pred cccCceEEEE
Confidence 46788863
No 306
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=31.85 E-value=1.6e+02 Score=24.64 Aligned_cols=58 Identities=14% Similarity=0.180 Sum_probs=39.8
Q ss_pred CCCEEEEecCC------CCccchhHHHHHHHHcCCC-eE-EE-Ec--CCCCCCCCccChHHHHHHHHHhh
Q 024033 213 ETPCTIFQPSN------DAVVPNSVAYYMQEKMKGK-ST-VE-II--EADGHFPQLTAHLQLIDVLNKVL 271 (273)
Q Consensus 213 ~~P~lii~G~~------D~~~~~~~~~~~~~~~~~~-~~-~~-~i--~~~gH~~~~e~p~~~~~~i~~fl 271 (273)
++-+++|.|+- |..+|...+-.....++++ .. .+ ++ +++.|.-+.|+|. +.+.+.+||
T Consensus 216 ~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~ksy~e~~~~Gk~a~Hs~lhen~~-v~~yv~~FL 284 (288)
T COG4814 216 NTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGKSYIESLYKGKDARHSKLHENPT-VAKYVKNFL 284 (288)
T ss_pred CcEEEEEecccccCCcCCCceechHhHHHHHHhccCcceeEEEeeeCCcchhhccCCChh-HHHHHHHHh
Confidence 56689999984 6777776666666666543 11 11 23 5589999999996 566777776
No 307
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=31.35 E-value=1.6e+02 Score=24.69 Aligned_cols=50 Identities=16% Similarity=0.161 Sum_probs=31.8
Q ss_pred CCCCCEEEEecCCCC---------ccchhH-HHHHHHHcCCCeEEEEcCCCCCCCCccCh
Q 024033 211 KVETPCTIFQPSNDA---------VVPNSV-AYYMQEKMKGKSTVEIIEADGHFPQLTAH 260 (273)
Q Consensus 211 ~i~~P~lii~G~~D~---------~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p 260 (273)
+..+|+++|...-+. ..|... -+++....+.-+-..++.+.||+=+++..
T Consensus 152 ~~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~~p~~~~v~~~~GH~d~LDd~ 211 (259)
T PF12740_consen 152 DFSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECKPPSWHFVAKDYGHMDFLDDD 211 (259)
T ss_pred CCCCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhcCCCEEEEEeCCCCchHhhcCC
Confidence 356999999777663 444432 22333333323455667899999999887
No 308
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=30.40 E-value=45 Score=29.15 Aligned_cols=18 Identities=17% Similarity=0.255 Sum_probs=15.6
Q ss_pred EEEEEChhHHHHHHHHhh
Q 024033 98 LFIGHSMSGMIGCIASVK 115 (273)
Q Consensus 98 ~lvGhS~GG~ia~~~a~~ 115 (273)
.++|-|.||.||..++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 677999999999999863
No 309
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=30.22 E-value=3.3e+02 Score=22.85 Aligned_cols=38 Identities=16% Similarity=0.070 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHH-HHc-CCCceEEEEEChhHHHHHHHHhh
Q 024033 78 YEAFADDLITLL-EEN-DLKSTLFIGHSMSGMIGCIASVK 115 (273)
Q Consensus 78 ~~~~a~~l~~~~-~~~-~~~~~~lvGhS~GG~ia~~~a~~ 115 (273)
+++-+.+...++ +.. ..+.+.++|.|-|+.+|-.+|..
T Consensus 73 ~~~~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 73 IEARIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred hHHHHHHHHHHHHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 555555544433 544 34568999999999999888743
No 310
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=29.97 E-value=91 Score=25.90 Aligned_cols=21 Identities=19% Similarity=0.253 Sum_probs=18.0
Q ss_pred eEEEEEChhHHHHHHHHhhCc
Q 024033 97 TLFIGHSMSGMIGCIASVKKP 117 (273)
Q Consensus 97 ~~lvGhS~GG~ia~~~a~~~p 117 (273)
-.++|-|.|+.++..++...+
T Consensus 34 ~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 34 RMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred CEEEEEcHHHHHHHHHHhCCC
Confidence 469999999999999887655
No 311
>cd06143 PAN2_exo DEDDh 3'-5' exonuclease domain of the eukaryotic exoribonuclease PAN2. PAN2 is the catalytic subunit of poly(A) nuclease (PAN), a Pab1p-dependent 3'-5' exoribonuclease which plays an important role in the posttranscriptional maturation of pre-mRNAs. PAN catalyzes the deadenylation of poly(A) tails, which are initially synthesized to default lengths of 70 to 90, to mRNA-specific lengths of 55 to 71. Pab1p and PAN also play a role in the export and decay of mRNA. PAN2 contains a DEDDh-type DnaQ-like 3'-5' exonuclease domain with three conserved sequence motifs termed ExoI, ExoII and ExoIII, with a specific Hx(4)D conserved pattern at ExoIII. These motifs are clustered around the active site and contain four conserved acidic residues that serve as ligands for the two metal ions required for catalysis.
Probab=29.02 E-value=50 Score=25.75 Aligned_cols=14 Identities=21% Similarity=0.584 Sum_probs=11.1
Q ss_pred CceEEEEEChhHHH
Q 024033 95 KSTLFIGHSMSGMI 108 (273)
Q Consensus 95 ~~~~lvGhS~GG~i 108 (273)
+..+|||||+--=+
T Consensus 101 ~~tILVGHsL~nDL 114 (174)
T cd06143 101 LGCIFVGHGLAKDF 114 (174)
T ss_pred CCCEEEeccchhHH
Confidence 45799999998744
No 312
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=28.83 E-value=95 Score=25.74 Aligned_cols=21 Identities=10% Similarity=-0.005 Sum_probs=17.8
Q ss_pred eEEEEEChhHHHHHHHHhhCc
Q 024033 97 TLFIGHSMSGMIGCIASVKKP 117 (273)
Q Consensus 97 ~~lvGhS~GG~ia~~~a~~~p 117 (273)
-.++|-|.|+.++..++...+
T Consensus 38 ~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 38 RKIYGASAGALTATALVTGVC 58 (249)
T ss_pred CeEEEEcHHHHHHHHHHcCCC
Confidence 468899999999999887654
No 313
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=28.70 E-value=90 Score=24.60 Aligned_cols=60 Identities=13% Similarity=0.147 Sum_probs=34.5
Q ss_pred CCceEEEecCCCCChhch---hhhhhhhhc-C--ceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHH
Q 024033 20 GKETLVLAHGFGGDQSIW---DKITPVLSQ-H--YRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEE 91 (273)
Q Consensus 20 ~~~~vvllHG~~~~~~~w---~~~~~~L~~-~--~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~ 91 (273)
..+|++++||-.+..--. ..+...|.+ + ..++.+.--|||.. .+ ....++.+.+.+++++
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~-~~-----------~~~~~~~~~~~~f~~~ 208 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFG-NP-----------ENRRDWYERILDFFDK 208 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTT-SH-----------HHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCC-Cc-----------hhHHHHHHHHHHHHHH
Confidence 357899999976643222 334455555 3 55666666666554 11 1244667777777765
No 314
>TIGR00421 ubiX_pad polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases. In E.coli, the protein UbiX (3-octaprenyl-4-hydroxybenzoate carboxy-lyase) has been shown to be involved in the third step of ubiquinone biosynthesis. It catalyzes the reaction [3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2]. The knockout of the homologous protein in yeast confers sensitivity to phenylacrylic acid. Members are not restricted to ubiquinone-synthesizing species. This family represents a distinct clade within the flavoprotein family of Pfam model pfam02441.
Probab=28.23 E-value=2.3e+02 Score=22.13 Aligned_cols=61 Identities=20% Similarity=0.054 Sum_probs=34.9
Q ss_pred ceEEEecCCCCChhchhhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHH-HHHHHcCCCc
Q 024033 22 ETLVLAHGFGGDQSIWDKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLI-TLLEENDLKS 96 (273)
Q Consensus 22 ~~vvllHG~~~~~~~w~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~-~~~~~~~~~~ 96 (273)
.||++.+--+.....-.+.+..|++ ++.++-|. +|+.. +| .+++++++-+. .+++.+|++.
T Consensus 113 ~pv~i~P~~m~~~~~~~~Nl~~L~~~G~~ii~P~-~g~~~--~p-----------~~~~~~~~~i~~~~l~~lg~~~ 175 (181)
T TIGR00421 113 RKLVLVPRETPLNSIHLENMLRLSRMGAIILPPM-PAFYT--RP-----------KSVEDMIDFIVGRVLDQLGIEN 175 (181)
T ss_pred CCEEEEeCCCcCCHHHHHHHHHHHHCCCEEECCC-CcccC--CC-----------CCHHHHHHHHHHHHHHHcCCCc
Confidence 3567776322222222455667777 67776543 34311 22 24888888876 5788888753
No 315
>PF15566 Imm18: Immunity protein 18
Probab=27.89 E-value=81 Score=19.16 Aligned_cols=30 Identities=20% Similarity=0.292 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHcCCCceEEEEEChhHH
Q 024033 78 YEAFADDLITLLEENDLKSTLFIGHSMSGM 107 (273)
Q Consensus 78 ~~~~a~~l~~~~~~~~~~~~~lvGhS~GG~ 107 (273)
++.++++|..+..+...+..++.--||||.
T Consensus 4 L~~L~~~l~~L~~~~~~~H~Hlmtp~WgG~ 33 (52)
T PF15566_consen 4 LELLQDQLENLQEKEPFDHEHLMTPDWGGE 33 (52)
T ss_pred HHHHHHHHHHHHhccCCCCceecccccccc
Confidence 566788888888877777899999999995
No 316
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=27.16 E-value=3.8e+02 Score=22.54 Aligned_cols=75 Identities=7% Similarity=-0.020 Sum_probs=43.8
Q ss_pred hchhhhhhhhhc--CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCCCceEEEEE-ChhHHHHHH
Q 024033 35 SIWDKITPVLSQ--HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDLKSTLFIGH-SMSGMIGCI 111 (273)
Q Consensus 35 ~~w~~~~~~L~~--~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~~~~~lvGh-S~GG~ia~~ 111 (273)
......+..|++ +++++.+|-+|.... -....+++.++++......++||-- ++++.-+..
T Consensus 140 ~~l~~~l~~l~~~~~~D~ViIDt~Gr~~~----------------~~~~l~el~~~~~~~~~~~~~LVl~a~~~~~d~~~ 203 (270)
T PRK06731 140 AAMTRALTYFKEEARVDYILIDTAGKNYR----------------ASETVEEMIETMGQVEPDYICLTLSASMKSKDMIE 203 (270)
T ss_pred HHHHHHHHHHHhcCCCCEEEEECCCCCcC----------------CHHHHHHHHHHHhhhCCCeEEEEEcCccCHHHHHH
Confidence 334444555654 689999999985322 1223444555655544445666654 567766666
Q ss_pred HHhh-CcccccceEE
Q 024033 112 ASVK-KPELFKRLIL 125 (273)
Q Consensus 112 ~a~~-~p~~v~~lvl 125 (273)
.+.+ ++-.+.++|+
T Consensus 204 ~~~~f~~~~~~~~I~ 218 (270)
T PRK06731 204 IITNFKDIHIDGIVF 218 (270)
T ss_pred HHHHhCCCCCCEEEE
Confidence 5554 4456777776
No 317
>COG4819 EutA Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition [Amino acid transport and metabolism]
Probab=27.13 E-value=3.1e+02 Score=24.10 Aligned_cols=64 Identities=13% Similarity=0.237 Sum_probs=46.8
Q ss_pred hcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCCCc--eEEEEEChhHHHHHHHHhhCcccc
Q 024033 45 SQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDLKS--TLFIGHSMSGMIGCIASVKKPELF 120 (273)
Q Consensus 45 ~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~~~--~~lvGhS~GG~ia~~~a~~~p~~v 120 (273)
.++-.-+++-++|- . +.+|..+-.+++.+.++++.....+ +++.+|+||=.+++.+..+-|..+
T Consensus 369 de~~~~~alal~ge----n--------~~~y~~v~~va~ai~~~~k~~s~~hplivv~~~D~gKaLGq~l~~~l~~~~ 434 (473)
T COG4819 369 DEKTDAYALALPGE----N--------PVRYAAVLTVANAIVDFVKRFSNPHPLIVVAEQDFGKALGQLLRPQLPGQL 434 (473)
T ss_pred CcCcceEEEEcccC----C--------ChhHHHHHHHHHHHHHHHHhcCCCCcEEEEEhhHHHHHHHHHhcccCCCCc
Confidence 33556777777772 2 2346567788999999999876544 466799999999999988877554
No 318
>COG5019 CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton]
Probab=27.11 E-value=30 Score=30.29 Aligned_cols=24 Identities=25% Similarity=0.657 Sum_probs=20.5
Q ss_pred eEEEecCCCC---Chhchhhhhhhhhc
Q 024033 23 TLVLAHGFGG---DQSIWDKITPVLSQ 46 (273)
Q Consensus 23 ~vvllHG~~~---~~~~w~~~~~~L~~ 46 (273)
+|+-.||||+ ++.+|++++.++.+
T Consensus 85 ~vIDtpGfGD~idNs~~we~I~~yI~~ 111 (373)
T COG5019 85 TVIDTPGFGDFIDNSKCWEPIVDYIDD 111 (373)
T ss_pred EEeccCCccccccccccHHHHHHHHHH
Confidence 7899999986 78999999888754
No 319
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=26.82 E-value=1.3e+02 Score=27.03 Aligned_cols=57 Identities=12% Similarity=0.017 Sum_probs=34.9
Q ss_pred CCCCCCEEEEecCCCCccchhHHHHHHHHcC--CCeEEEEcCCCCCCCCccC-----hHHHHHHHHHhh
Q 024033 210 DKVETPCTIFQPSNDAVVPNSVAYYMQEKMK--GKSTVEIIEADGHFPQLTA-----HLQLIDVLNKVL 271 (273)
Q Consensus 210 ~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~-----p~~~~~~i~~fl 271 (273)
+.-.--+++|+|++|++.-... ...+ ..+.+.+.|+++|...+.. =++....|++|.
T Consensus 348 r~~~~rmlFVYG~nDPW~A~~f-----~l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~Wa 411 (448)
T PF05576_consen 348 RNNGPRMLFVYGENDPWSAEPF-----RLGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWA 411 (448)
T ss_pred HhCCCeEEEEeCCCCCcccCcc-----ccCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHc
Confidence 3344558999999999864321 1111 1357778899999875533 234455566664
No 320
>PRK10319 N-acetylmuramoyl-l-alanine amidase I; Provisional
Probab=26.82 E-value=1.3e+02 Score=25.63 Aligned_cols=46 Identities=17% Similarity=0.151 Sum_probs=24.6
Q ss_pred CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCC
Q 024033 47 HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDL 94 (273)
Q Consensus 47 ~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~ 94 (273)
.-++|++| ||||..|... .+.....+..=--+++..+.+.+++.|.
T Consensus 55 ~~~~IvID-pGHGG~DpGA-vg~~G~~EKdi~L~IA~~l~~~L~~~G~ 100 (287)
T PRK10319 55 GKRVVMLD-PGHGGIDTGA-IGRNGSKEKHVVLAIAKNVRSILRNHGI 100 (287)
T ss_pred CCeEEEEE-CCCCCCCCCC-cCCCCCcHHHHHHHHHHHHHHHHHHCCC
Confidence 45789999 6999884332 1100001111022466667777776654
No 321
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=25.66 E-value=85 Score=25.21 Aligned_cols=31 Identities=26% Similarity=0.352 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHcCCCceEEEEEChhHHHHHH
Q 024033 81 FADDLITLLEENDLKSTLFIGHSMSGMIGCI 111 (273)
Q Consensus 81 ~a~~l~~~~~~~~~~~~~lvGhS~GG~ia~~ 111 (273)
..+.+...++..+.-..+++=||+||-.+.-
T Consensus 110 ~~~~ir~~~e~~d~~~~~~i~~slgGGTGSG 140 (216)
T PF00091_consen 110 ILEQIRKEIEKCDSLDGFFIVHSLGGGTGSG 140 (216)
T ss_dssp HHHHHHHHHHTSTTESEEEEEEESSSSHHHH
T ss_pred cccccchhhccccccccceecccccceeccc
Confidence 3344444444444446899999999886443
No 322
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=25.48 E-value=4.7e+02 Score=23.40 Aligned_cols=96 Identities=13% Similarity=0.015 Sum_probs=51.9
Q ss_pred ceEEEecCCC---CChhchhhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHH---cCC
Q 024033 22 ETLVLAHGFG---GDQSIWDKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEE---NDL 94 (273)
Q Consensus 22 ~~vvllHG~~---~~~~~w~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~---~~~ 94 (273)
.|||+++-.. .......+.+..|.+ ++.|+- ..+|+--+... ...+..+.+++++.+...+.. +..
T Consensus 113 ~plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~-P~~g~~ac~~~------g~g~~~~~~~i~~~v~~~~~~~~~~~~ 185 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAVQENIKRLKDDGYIFIE-PDSGLLACGDE------GKGRLAEPETIVKAAEREFSPKEDLEG 185 (390)
T ss_pred CCEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEEC-CCCcccccccc------cCCCCCCHHHHHHHHHHHHhhccccCC
Confidence 4677877632 222344667777887 555543 34444322110 011233588888888877754 444
Q ss_pred CceEEEEE------------------ChhHHHHHHHHhhCcccccceEEeec
Q 024033 95 KSTLFIGH------------------SMSGMIGCIASVKKPELFKRLILIGT 128 (273)
Q Consensus 95 ~~~~lvGh------------------S~GG~ia~~~a~~~p~~v~~lvl~~~ 128 (273)
+++.+-|= .||..++..++.+- ..+++++.
T Consensus 186 ~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~G----a~V~~~~g 233 (390)
T TIGR00521 186 KRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRG----ADVTLITG 233 (390)
T ss_pred ceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCC----CEEEEeCC
Confidence 45555554 36677777666553 34555553
No 323
>PRK03031 rnpA ribonuclease P; Reviewed
Probab=25.38 E-value=1.9e+02 Score=20.85 Aligned_cols=20 Identities=30% Similarity=0.546 Sum_probs=16.0
Q ss_pred cHHHHHHHHHHHHHHcCCCc
Q 024033 77 SYEAFADDLITLLEENDLKS 96 (273)
Q Consensus 77 s~~~~a~~l~~~~~~~~~~~ 96 (273)
++.++.+++..+++..++.+
T Consensus 100 ~~~~l~~~l~~ll~k~~~~~ 119 (122)
T PRK03031 100 NYEQFLQELEQLLIQAEIIH 119 (122)
T ss_pred CHHHHHHHHHHHHHHccCcc
Confidence 48899999999999876443
No 324
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=24.82 E-value=1.2e+02 Score=25.75 Aligned_cols=50 Identities=12% Similarity=0.088 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHcCC---CceEEEEEChhHHHHHHHH---hhCcccccceEEeecC
Q 024033 80 AFADDLITLLEENDL---KSTLFIGHSMSGMIGCIAS---VKKPELFKRLILIGTS 129 (273)
Q Consensus 80 ~~a~~l~~~~~~~~~---~~~~lvGhS~GG~ia~~~a---~~~p~~v~~lvl~~~~ 129 (273)
.+.+.+.+-++.+.- .+.+|.|.|+|++-+...- ...-+++.+.+..+++
T Consensus 91 aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP 146 (289)
T PF10081_consen 91 ALFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPP 146 (289)
T ss_pred HHHHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCC
Confidence 334444444455532 3589999999988765533 2233568888888764
No 325
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=24.77 E-value=2.2e+02 Score=21.72 Aligned_cols=49 Identities=27% Similarity=0.289 Sum_probs=29.2
Q ss_pred hhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCCCc-eEEEEEChh
Q 024033 40 ITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDLKS-TLFIGHSMS 105 (273)
Q Consensus 40 ~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~~~-~~lvGhS~G 105 (273)
+...+..+-.+|++|-.|-= ++ -+++|+-+....+. +..+ +++||=+.|
T Consensus 60 il~~l~~~~~~i~LDe~Gk~---------------~s-S~~fA~~l~~~~~~-g~~~i~F~IGGa~G 109 (157)
T PRK00103 60 ILAALPKGARVIALDERGKQ---------------LS-SEEFAQELERWRDD-GRSDVAFVIGGADG 109 (157)
T ss_pred HHhhCCCCCEEEEEcCCCCc---------------CC-HHHHHHHHHHHHhc-CCccEEEEEcCccc
Confidence 34445555679999988721 22 45566666665432 3323 577787777
No 326
>PF12083 DUF3560: Domain of unknown function (DUF3560); InterPro: IPR021944 This presumed domain is functionally uncharacterised. This domain is found in bacteria. This domain is about 120 amino acids in length. This domain has a conserved GHHSE sequence motif.
Probab=24.76 E-value=68 Score=23.57 Aligned_cols=22 Identities=14% Similarity=0.292 Sum_probs=14.4
Q ss_pred HHHHHHHHHHcCCCceEEEEEC
Q 024033 82 ADDLITLLEENDLKSTLFIGHS 103 (273)
Q Consensus 82 a~~l~~~~~~~~~~~~~lvGhS 103 (273)
.+....+.+.+.+..+|||||.
T Consensus 29 ~~~a~~~~~~ip~GQPIlVGHH 50 (126)
T PF12083_consen 29 YEAANRMAEAIPFGQPILVGHH 50 (126)
T ss_pred HHHHHHHHhccCCCCCeecccc
Confidence 3444455555666789999984
No 327
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=24.61 E-value=2.4e+02 Score=22.95 Aligned_cols=35 Identities=14% Similarity=0.241 Sum_probs=24.7
Q ss_pred CceEEEecCCCCChhc--h-hhhhhhhhc-CceEEEEec
Q 024033 21 KETLVLAHGFGGDQSI--W-DKITPVLSQ-HYRVLAFDW 55 (273)
Q Consensus 21 ~~~vvllHG~~~~~~~--w-~~~~~~L~~-~~~via~D~ 55 (273)
+++|.||+=.+.+... | .+....|++ +..+..+++
T Consensus 32 ~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l 70 (224)
T COG3340 32 RKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHL 70 (224)
T ss_pred CceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeec
Confidence 4689999988776655 4 556666777 677776664
No 328
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=24.21 E-value=98 Score=23.41 Aligned_cols=21 Identities=10% Similarity=0.224 Sum_probs=16.8
Q ss_pred CceEEEEEChhHHHHHHHHhh
Q 024033 95 KSTLFIGHSMSGMIGCIASVK 115 (273)
Q Consensus 95 ~~~~lvGhS~GG~ia~~~a~~ 115 (273)
.--.++|-|.||++|..++..
T Consensus 27 ~~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 27 RFDVISGTSAGALNAALLALG 47 (204)
T ss_dssp T-SEEEEECCHHHHHHHHHTC
T ss_pred CccEEEEcChhhhhHHHHHhC
Confidence 335788999999999887765
No 329
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=23.93 E-value=1.5e+02 Score=25.04 Aligned_cols=19 Identities=26% Similarity=0.328 Sum_probs=16.6
Q ss_pred EEEEEChhHHHHHHHHhhC
Q 024033 98 LFIGHSMSGMIGCIASVKK 116 (273)
Q Consensus 98 ~lvGhS~GG~ia~~~a~~~ 116 (273)
.++|-|.||.+|+.++...
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 6789999999999998654
No 330
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.90 E-value=1.3e+02 Score=25.86 Aligned_cols=34 Identities=21% Similarity=0.273 Sum_probs=27.6
Q ss_pred HHHHHHHHHHcCC----CceEEEEEC--hhHHHHHHHHhh
Q 024033 82 ADDLITLLEENDL----KSTLFIGHS--MSGMIGCIASVK 115 (273)
Q Consensus 82 a~~l~~~~~~~~~----~~~~lvGhS--~GG~ia~~~a~~ 115 (273)
+..+.+++++.++ +++.++|-| ||-.++..+..+
T Consensus 143 p~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 143 PSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHC
Confidence 6678888887754 579999997 999999888765
No 331
>PF08197 TT_ORF2a: pORF2a truncated protein; InterPro: IPR013267 Most isolated ORF2 of TT virus (TTV) encode a 49 amino acid protein (pORF2a) because of an in-frame stop codon. ORF2s isolated from G1 TTV encode a 202 amino acid protein (pORF2ab) [].
Probab=23.79 E-value=48 Score=19.17 Aligned_cols=14 Identities=29% Similarity=0.166 Sum_probs=10.8
Q ss_pred ceEEEEecCCCccc
Q 024033 48 YRVLAFDWLFSGAI 61 (273)
Q Consensus 48 ~~via~D~~G~G~S 61 (273)
-.+-+-|+||||.-
T Consensus 35 gairardwpg~gq~ 48 (49)
T PF08197_consen 35 GAIRARDWPGYGQG 48 (49)
T ss_pred cceEeccCCCcCCC
Confidence 35778899999963
No 332
>PRK13512 coenzyme A disulfide reductase; Provisional
Probab=23.60 E-value=1.5e+02 Score=26.70 Aligned_cols=47 Identities=21% Similarity=0.238 Sum_probs=31.0
Q ss_pred HHHHHHHHHHcCCCceEEEEEChhHHHHHHHHhhCcccccceEEeecCCC
Q 024033 82 ADDLITLLEENDLKSTLFIGHSMSGMIGCIASVKKPELFKRLILIGTSPR 131 (273)
Q Consensus 82 a~~l~~~~~~~~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~ 131 (273)
++.+.+.+.....+++.++| ||.+++.+|...-..=+.+.++...+.
T Consensus 136 ~~~l~~~l~~~~~~~vvViG---gG~ig~E~A~~l~~~g~~Vtli~~~~~ 182 (438)
T PRK13512 136 TDAIDQFIKANQVDKALVVG---AGYISLEVLENLYERGLHPTLIHRSDK 182 (438)
T ss_pred HHHHHHHHhhcCCCEEEEEC---CCHHHHHHHHHHHhCCCcEEEEecccc
Confidence 44455555544457899999 889999988754444356777765443
No 333
>PF05707 Zot: Zonular occludens toxin (Zot); InterPro: IPR008900 This entry consists of bacterial and viral proteins which are very similar to the Zonular occludens toxin (Zot). Zot is elaborated by bacteriophage present in toxigenic strains of Vibrio cholerae. Zot is a single polypeptide chain of 44.8 kDa, with the ability to reversibly alter intestinal epithelial tight junctions, allowing the passage of macromolecules through mucosal barriers.; PDB: 2R2A_B.
Probab=23.34 E-value=90 Score=24.52 Aligned_cols=34 Identities=21% Similarity=0.188 Sum_probs=19.8
Q ss_pred EEEecCCCCChhchhh----hhhhhhcCceEEEEecCCC
Q 024033 24 LVLAHGFGGDQSIWDK----ITPVLSQHYRVLAFDWLFS 58 (273)
Q Consensus 24 vvllHG~~~~~~~w~~----~~~~L~~~~~via~D~~G~ 58 (273)
|.++.|.++++.++.- +.+.|.++.+|++ +.+|-
T Consensus 2 I~~~~G~pGsGKS~~av~~~i~~~l~~gr~V~t-ni~gL 39 (193)
T PF05707_consen 2 IYLITGKPGSGKSYYAVSYVIIPALKKGRPVYT-NIPGL 39 (193)
T ss_dssp EEEEE--TTSSHHHHHHHHHHH-GGGS---EEE---TTB
T ss_pred EEEEEcCCCCcHhHHHHHHHHHHHHhCCCEEEE-ccCCc
Confidence 6889999999988843 5667777777777 87764
No 334
>PF03283 PAE: Pectinacetylesterase
Probab=23.33 E-value=2.2e+02 Score=25.17 Aligned_cols=34 Identities=24% Similarity=0.283 Sum_probs=23.1
Q ss_pred CceEEEEEChhHHHHHHHH----hhCcccccceEEeec
Q 024033 95 KSTLFIGHSMSGMIGCIAS----VKKPELFKRLILIGT 128 (273)
Q Consensus 95 ~~~~lvGhS~GG~ia~~~a----~~~p~~v~~lvl~~~ 128 (273)
++++|-|-|-||+-++..+ ...|..++-..+.|+
T Consensus 156 ~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~Ds 193 (361)
T PF03283_consen 156 KQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDS 193 (361)
T ss_pred ceEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccc
Confidence 5799999999999887644 456654444444444
No 335
>PRK11789 N-acetyl-anhydromuranmyl-L-alanine amidase; Provisional
Probab=23.18 E-value=1e+02 Score=24.39 Aligned_cols=27 Identities=26% Similarity=0.252 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHcCCCceEEEEECh
Q 024033 78 YEAFADDLITLLEENDLKSTLFIGHSM 104 (273)
Q Consensus 78 ~~~~a~~l~~~~~~~~~~~~~lvGhS~ 104 (273)
++.++..+..++++.++....++|||-
T Consensus 132 ~~aL~~L~~~L~~~y~i~~~~IvGH~d 158 (185)
T PRK11789 132 YQALAALTRALRAAYPIIAERITGHSD 158 (185)
T ss_pred HHHHHHHHHHHHHHcCCCHHhEEehhh
Confidence 556666677778888877778999973
No 336
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=22.71 E-value=2.9e+02 Score=19.69 Aligned_cols=70 Identities=19% Similarity=0.180 Sum_probs=43.3
Q ss_pred eEEEecCCCCChhchhhhhhhhhc-CceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCCC-ceEEE
Q 024033 23 TLVLAHGFGGDQSIWDKITPVLSQ-HYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDLK-STLFI 100 (273)
Q Consensus 23 ~vvllHG~~~~~~~w~~~~~~L~~-~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~~-~~~lv 100 (273)
.|+.-|| .-+.........+.. .-.+.++++.- + .+++++.+.+.+++++.+-. .++++
T Consensus 3 ili~sHG--~~A~gi~~~~~~i~G~~~~i~~~~~~~-------~----------~~~~~~~~~i~~~i~~~~~~~~viil 63 (122)
T cd00006 3 IIIATHG--GFASGLLNSAEMILGEQENVEAIDFPP-------G----------ESPDDLLEKIKAALAELDSGEGVLIL 63 (122)
T ss_pred EEEEcCH--HHHHHHHHHHHHhcCCCCCeEEEEeCC-------C----------CCHHHHHHHHHHHHHHhCCCCcEEEE
Confidence 4778888 335555555555544 34677776522 1 24778888888888887643 45555
Q ss_pred EEChhHHHHHH
Q 024033 101 GHSMSGMIGCI 111 (273)
Q Consensus 101 GhS~GG~ia~~ 111 (273)
--=+||.....
T Consensus 64 ~Dl~GGSp~n~ 74 (122)
T cd00006 64 TDLFGGSPNNA 74 (122)
T ss_pred EeCCCCCHHHH
Confidence 44448877543
No 337
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=21.89 E-value=63 Score=27.43 Aligned_cols=29 Identities=17% Similarity=0.347 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHHcCCCce-EEEEEChhH
Q 024033 78 YEAFADDLITLLEENDLKST-LFIGHSMSG 106 (273)
Q Consensus 78 ~~~~a~~l~~~~~~~~~~~~-~lvGhS~GG 106 (273)
..++.+.+.+.+++.|+.++ .+.|||+|=
T Consensus 126 ~~dV~~ai~~~i~~~G~~~~~~~~GHgig~ 155 (291)
T cd01088 126 LGEIGEAIEEVIESYGFKPIRNLTGHSIER 155 (291)
T ss_pred HHHHHHHHHHHHHHcCCEEeecCCccCccC
Confidence 56677777788888888764 788999994
No 338
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=21.65 E-value=1.2e+02 Score=22.61 Aligned_cols=39 Identities=21% Similarity=0.197 Sum_probs=27.9
Q ss_pred eEEEecCCCCChhch--hhhhhhhhc-CceEEEEecCCCccc
Q 024033 23 TLVLAHGFGGDQSIW--DKITPVLSQ-HYRVLAFDWLFSGAI 61 (273)
Q Consensus 23 ~vvllHG~~~~~~~w--~~~~~~L~~-~~~via~D~~G~G~S 61 (273)
|+|++-|...++... +.++..|.+ +|+|.++=.-+||..
T Consensus 1 pvv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~ 42 (140)
T PF03205_consen 1 PVVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQF 42 (140)
T ss_dssp -EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTST
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCc
Confidence 588999998887666 788898885 899987777777655
No 339
>PRK14974 cell division protein FtsY; Provisional
Probab=21.57 E-value=4.8e+02 Score=22.76 Aligned_cols=64 Identities=14% Similarity=0.131 Sum_probs=38.8
Q ss_pred cCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCCCceEEEEEChhHHHHHHHHhhCc--ccccce
Q 024033 46 QHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDLKSTLFIGHSMSGMIGCIASVKKP--ELFKRL 123 (273)
Q Consensus 46 ~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~~~~~lvGhS~GG~ia~~~a~~~p--~~v~~l 123 (273)
.+++++.+|-+|...+ -..+.+++..+.+....+..+||.-+.-|.-+...+..+. -.+.++
T Consensus 221 ~~~DvVLIDTaGr~~~----------------~~~lm~eL~~i~~~~~pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~gi 284 (336)
T PRK14974 221 RGIDVVLIDTAGRMHT----------------DANLMDELKKIVRVTKPDLVIFVGDALAGNDAVEQAREFNEAVGIDGV 284 (336)
T ss_pred CCCCEEEEECCCccCC----------------cHHHHHHHHHHHHhhCCceEEEeeccccchhHHHHHHHHHhcCCCCEE
Confidence 3678999998774322 2233455666665555556778877777766555554432 345666
Q ss_pred EE
Q 024033 124 IL 125 (273)
Q Consensus 124 vl 125 (273)
|+
T Consensus 285 Il 286 (336)
T PRK14974 285 IL 286 (336)
T ss_pred EE
Confidence 66
No 340
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=21.56 E-value=71 Score=27.70 Aligned_cols=29 Identities=17% Similarity=0.098 Sum_probs=24.2
Q ss_pred eEEEEcCCCCCCCCccChHHHHHHHHHhh
Q 024033 243 STVEIIEADGHFPQLTAHLQLIDVLNKVL 271 (273)
Q Consensus 243 ~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 271 (273)
.++.+|..+||+++.++|+.....++.+-
T Consensus 383 l~f~wilraghmvp~Dnp~~a~hmlr~vt 411 (414)
T KOG1283|consen 383 LSFFWILRAGHMVPADNPAAASHMLRHVT 411 (414)
T ss_pred ceeEEeecccCcccCCCHHHHhhheeecc
Confidence 36788999999999999998887776554
No 341
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=21.46 E-value=1.8e+02 Score=22.34 Aligned_cols=38 Identities=21% Similarity=0.255 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHcCC----CceEEEEEC--hhHHHHHHHHhh
Q 024033 78 YEAFADDLITLLEENDL----KSTLFIGHS--MSGMIGCIASVK 115 (273)
Q Consensus 78 ~~~~a~~l~~~~~~~~~----~~~~lvGhS--~GG~ia~~~a~~ 115 (273)
+..-+..+.++++..++ +++.++|.| .|-.+++.+..+
T Consensus 16 ~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~ 59 (160)
T PF02882_consen 16 VPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNK 59 (160)
T ss_dssp --HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhC
Confidence 44457788888888653 579999999 688888888766
No 342
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=21.23 E-value=4.1e+02 Score=22.80 Aligned_cols=70 Identities=26% Similarity=0.431 Sum_probs=44.0
Q ss_pred ceEEEecCCCCChhchhhhhhhhhc-CceEEEEecC----------CCccccCCCCCCCCCCc-ccccHHHHHHHHHHHH
Q 024033 22 ETLVLAHGFGGDQSIWDKITPVLSQ-HYRVLAFDWL----------FSGAILNKDHQSLYNPV-KYSSYEAFADDLITLL 89 (273)
Q Consensus 22 ~~vvllHG~~~~~~~w~~~~~~L~~-~~~via~D~~----------G~G~S~~~~~~~~~~~~-~~~s~~~~a~~l~~~~ 89 (273)
|-|+|.-|.++ ..+.|.+ +|.||.+|+- |.--+- ++..|+. -|.|-+.+.+.+.+.+
T Consensus 253 Pmi~fakG~g~-------~Le~l~~tG~DVvgLDWTvdp~ear~~~g~~Vtl----QGNlDP~~ly~s~e~it~~v~~mv 321 (359)
T KOG2872|consen 253 PMILFAKGSGG-------ALEELAQTGYDVVGLDWTVDPAEARRRVGNRVTL----QGNLDPGVLYGSKEEITQLVKQMV 321 (359)
T ss_pred ceEEEEcCcch-------HHHHHHhcCCcEEeecccccHHHHHHhhCCceEE----ecCCChHHhcCCHHHHHHHHHHHH
Confidence 56788877554 3455666 8999999982 211110 1112222 2667889999999999
Q ss_pred HHcCCCceEE-EEE
Q 024033 90 EENDLKSTLF-IGH 102 (273)
Q Consensus 90 ~~~~~~~~~l-vGh 102 (273)
+..|.++.++ +||
T Consensus 322 ~~fG~~ryI~NLGH 335 (359)
T KOG2872|consen 322 KDFGKSRYIANLGH 335 (359)
T ss_pred HHhCccceEEecCC
Confidence 9988665433 354
No 343
>PF02126 PTE: Phosphotriesterase family; InterPro: IPR001559 Synonym(s): Paraoxonase, A-esterase, Aryltriphosphatase, Phosphotriesterase, Paraoxon hydrolase Bacteria such as Brevundimonas diminuta (Pseudomonas diminuta) harbour a plasmid that carries the gene for Aryldialkylphosphatase (3.1.8.1 from EC) (PTE) (also known as parathion hydrolase). This enzyme has attracted interest because of its potential use in the detoxification of chemical waste and warfare agents and its ability to degrade agricultural pesticides such as parathion. It acts specifically on synthetic organophosphate triesters and phosphorofluoridates. It does not seem to have a natural occuring substrate and may thus have optimally evolved for utilizing paraoxon. Aryldialkylphosphatase belongs to a family [, ] of enzymes that possess a binuclear zinc metal centre at their active site. The two zinc ions are coordinated by six different residues, six of which being histidines. This family so far includes, in addition to the parathion hydrolase, the following proteins: Escherichia coli protein Php, the substrate of which is not yet known. Mycobacterium tuberculosis phosphotriesterase homology protein Rv0230C. Mammalian phosphotriesterase related protein (PTER) (RPR-1). ; GO: 0008270 zinc ion binding, 0016788 hydrolase activity, acting on ester bonds, 0009056 catabolic process; PDB: 3MSR_A 3OVG_D 3K2G_C 1BF6_B 3OQE_A 3C86_A 3SO7_A 2D2G_A 2R1P_A 2D2H_A ....
Probab=21.20 E-value=1.7e+02 Score=25.20 Aligned_cols=77 Identities=19% Similarity=0.205 Sum_probs=41.4
Q ss_pred ceEEEecCCCCChhchhhhhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCCCceEEEE
Q 024033 22 ETLVLAHGFGGDQSIWDKITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDLKSTLFIG 101 (273)
Q Consensus 22 ~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~~~~~lvG 101 (273)
..|++.|= +.......+.. |.+.--.+.+|..|+..+..... ..-.|.+-+..++-+..++++ |..+=+|++
T Consensus 184 ~rvvigH~--D~~~D~~y~~~-la~~G~~l~~D~~g~~~~g~~~~----~~~~~~~d~~ri~~l~~L~~~-Gy~~qIlLS 255 (308)
T PF02126_consen 184 SRVVIGHM--DRNPDLDYHRE-LADRGVYLEFDTIGREFSGKDKN----PRVGYPPDEERIELLKELIEE-GYADQILLS 255 (308)
T ss_dssp GGEEETSG--GGST-HHHHHH-HHHTT-EEEETTTT-B-TTTTTC----HSCTTS-HHHHHHHHHHHHHT-TTGGGEEE-
T ss_pred hHeEEeCC--CCCCCHHHHHH-HHhcCCEEEecCCcccccCcccC----ccCCCCCHHHHHHHHHHHHHc-CCcCcEEEe
Confidence 35888773 22223333333 33444568999998755421110 011245567778888888864 666678888
Q ss_pred EChhH
Q 024033 102 HSMSG 106 (273)
Q Consensus 102 hS~GG 106 (273)
|+++-
T Consensus 256 ~D~~~ 260 (308)
T PF02126_consen 256 HDIGR 260 (308)
T ss_dssp HHHES
T ss_pred ccccc
Confidence 88774
No 344
>PRK07281 methionine aminopeptidase; Reviewed
Probab=21.15 E-value=1e+02 Score=26.11 Aligned_cols=28 Identities=11% Similarity=0.203 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHHcCCCce-EEEEEChh
Q 024033 78 YEAFADDLITLLEENDLKST-LFIGHSMS 105 (273)
Q Consensus 78 ~~~~a~~l~~~~~~~~~~~~-~lvGhS~G 105 (273)
+.++.+.+.++++..++..+ ..+||++|
T Consensus 174 ~~di~~a~~~~~~~~G~~~~~~~~GHGIG 202 (286)
T PRK07281 174 IGDIGAAIQEYAESRGYGVVRDLVGHGVG 202 (286)
T ss_pred HHHHHHHHHHHHHHcCCccCCCeeeeeCC
Confidence 44555555566666666543 67888888
No 345
>PRK10431 N-acetylmuramoyl-l-alanine amidase II; Provisional
Probab=21.02 E-value=2.3e+02 Score=25.90 Aligned_cols=43 Identities=21% Similarity=0.100 Sum_probs=23.2
Q ss_pred eEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcC
Q 024033 49 RVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEEND 93 (273)
Q Consensus 49 ~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~ 93 (273)
-+|++| ||||..+.+. .+.....+..=.=+++..|.+.+++.+
T Consensus 192 ~vIvID-pGHGG~DpGA-~g~~G~~EKdv~L~iA~~L~~~L~~~~ 234 (445)
T PRK10431 192 VIIAID-AGHGGQDPGA-IGPGGTREKNVTIAIARKLRTLLNDDP 234 (445)
T ss_pred eEEEEe-CCCCCCCCCC-cCCCCccHHHHHHHHHHHHHHHHHhCC
Confidence 378999 7999984332 110001111102256777777777753
No 346
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=20.65 E-value=2.9e+02 Score=19.45 Aligned_cols=76 Identities=13% Similarity=0.102 Sum_probs=44.3
Q ss_pred CceEEEecCCCCChhchhhhhhhhhcCceEEEEecCCCccccCCCCCCCCCCcccccHHHHHHHHHHHHHHcCCCceEEE
Q 024033 21 KETLVLAHGFGGDQSIWDKITPVLSQHYRVLAFDWLFSGAILNKDHQSLYNPVKYSSYEAFADDLITLLEENDLKSTLFI 100 (273)
Q Consensus 21 ~~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~~~~s~~~~a~~l~~~~~~~~~~~~~lv 100 (273)
.|.|+|---++.-...-..+...+...+.|+-+|...+|.. ++ +.+.++.-.-....+++-
T Consensus 14 ~~VVifSKs~C~~c~~~k~ll~~~~v~~~vvELD~~~~g~e----------------iq---~~l~~~tg~~tvP~vFI~ 74 (104)
T KOG1752|consen 14 NPVVIFSKSSCPYCHRAKELLSDLGVNPKVVELDEDEDGSE----------------IQ---KALKKLTGQRTVPNVFIG 74 (104)
T ss_pred CCEEEEECCcCchHHHHHHHHHhCCCCCEEEEccCCCCcHH----------------HH---HHHHHhcCCCCCCEEEEC
Confidence 46778877665555444555555566788998886543321 22 222222222245668888
Q ss_pred EEChhHHHHHHHHhh
Q 024033 101 GHSMSGMIGCIASVK 115 (273)
Q Consensus 101 GhS~GG~ia~~~a~~ 115 (273)
|.+.||.--+.....
T Consensus 75 Gk~iGG~~dl~~lh~ 89 (104)
T KOG1752|consen 75 GKFIGGASDLMALHK 89 (104)
T ss_pred CEEEcCHHHHHHHHH
Confidence 999999865544433
No 347
>PRK07877 hypothetical protein; Provisional
Probab=20.60 E-value=1.9e+02 Score=28.27 Aligned_cols=36 Identities=17% Similarity=0.023 Sum_probs=28.9
Q ss_pred HHcCCCceEEEEEChhHHHHHHHHhhCccc-ccceEEeec
Q 024033 90 EENDLKSTLFIGHSMSGMIGCIASVKKPEL-FKRLILIGT 128 (273)
Q Consensus 90 ~~~~~~~~~lvGhS~GG~ia~~~a~~~p~~-v~~lvl~~~ 128 (273)
+++.-.++.++|-++|+.++..+|.. . |..++++|.
T Consensus 103 ~~L~~~~V~IvG~GlGs~~a~~Lara---GvvG~l~lvD~ 139 (722)
T PRK07877 103 ERLGRLRIGVVGLSVGHAIAHTLAAE---GLCGELRLADF 139 (722)
T ss_pred HHHhcCCEEEEEecHHHHHHHHHHHc---cCCCeEEEEcC
Confidence 34555789999999999999998866 3 478999885
No 348
>PRK08671 methionine aminopeptidase; Provisional
Probab=20.37 E-value=76 Score=26.92 Aligned_cols=29 Identities=10% Similarity=0.181 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHcCCCce-EEEEEChhH
Q 024033 78 YEAFADDLITLLEENDLKST-LFIGHSMSG 106 (273)
Q Consensus 78 ~~~~a~~l~~~~~~~~~~~~-~lvGhS~GG 106 (273)
..++.+.+.+.+++.|++++ .+.||++|=
T Consensus 127 ~~dv~~~i~~vi~~~G~~~~~~~~GHgiG~ 156 (291)
T PRK08671 127 VGEIGRVIEETIRSYGFKPIRNLTGHGLER 156 (291)
T ss_pred HHHHHHHHHHHHHHcCCcccCCCcccCcCC
Confidence 55666677777788887764 789999993
No 349
>PHA02114 hypothetical protein
Probab=20.26 E-value=1.1e+02 Score=21.33 Aligned_cols=32 Identities=25% Similarity=0.460 Sum_probs=25.6
Q ss_pred eEEEecCCCCChhchhhhhhhhhc-CceEEEEe
Q 024033 23 TLVLAHGFGGDQSIWDKITPVLSQ-HYRVLAFD 54 (273)
Q Consensus 23 ~vvllHG~~~~~~~w~~~~~~L~~-~~~via~D 54 (273)
+|||=--+-.+..-|-.++..|.+ +|.|++-.
T Consensus 84 tivldvn~amsr~pwi~v~s~le~~g~~vvatq 116 (127)
T PHA02114 84 TIVLDVNYAMSRAPWIKVISRLEEAGFNVVATQ 116 (127)
T ss_pred eEEEEehhhhccCcHHHHHHHHHhcCceeeehh
Confidence 677777777778889999999988 88888743
Done!