BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024034
(273 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0DJQ7|BLS_STRCL Carboxyethyl-arginine beta-lactam-synthase OS=Streptomyces
clavuligerus GN=bls PE=1 SV=1
Length = 513
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 69/170 (40%), Gaps = 25/170 (14%)
Query: 27 LQRALASPSQRRNLLQELFADIAL---EVDDR--ARDIILSGEEGGICPAEDGIDSRLCF 81
L RAL P +R +L ADI L +DR A D +L+ + DG++
Sbjct: 333 LYRALDGPERR--ILTGYGADIPLGGMHREDRLPALDTVLAHDMATF----DGLNEMSPV 386
Query: 82 YDVLADHYVRMPESGQRILDLIVQLWSQLFVSHIFALLFHKWIFEVQLNNDEVLLRYSSA 141
LA H+ P + +LDL+V L + L H KW+ + + A
Sbjct: 387 LSTLAGHWTTHPYWDREVLDLLVSLEAGLKRRHG----RDKWVLRAAMAD---------A 433
Query: 142 LVQGATNVFWIDIQTNSRHFQSLFRYLLEEVALEPARLNKIPVQVQRDLF 191
L N + + S S R LL+ E R+++ QV R+LF
Sbjct: 434 LPAETVNRPKLGVHEGSGTTSSFSRLLLDHGVAE-DRVHEAKRQVVRELF 482
>sp|P0DJQ8|BLS_STRC2 Carboxyethyl-arginine beta-lactam-synthase OS=Streptomyces
clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 /
NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602)
GN=bls PE=3 SV=1
Length = 513
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 69/170 (40%), Gaps = 25/170 (14%)
Query: 27 LQRALASPSQRRNLLQELFADIAL---EVDDR--ARDIILSGEEGGICPAEDGIDSRLCF 81
L RAL P +R +L ADI L +DR A D +L+ + DG++
Sbjct: 333 LYRALDGPERR--ILTGYGADIPLGGMHREDRLPALDTVLAHDMATF----DGLNEMSPV 386
Query: 82 YDVLADHYVRMPESGQRILDLIVQLWSQLFVSHIFALLFHKWIFEVQLNNDEVLLRYSSA 141
LA H+ P + +LDL+V L + L H KW+ + + A
Sbjct: 387 LSTLAGHWTTHPYWDREVLDLLVSLEAGLKRRHG----RDKWVLRAAMAD---------A 433
Query: 142 LVQGATNVFWIDIQTNSRHFQSLFRYLLEEVALEPARLNKIPVQVQRDLF 191
L N + + S S R LL+ E R+++ QV R+LF
Sbjct: 434 LPAETVNRPKLGVHEGSGTTSSFSRLLLDHGVAE-DRVHEAKRQVVRELF 482
>sp|P70181|PI51B_MOUSE Phosphatidylinositol 4-phosphate 5-kinase type-1 beta OS=Mus
musculus GN=Pip5k1b PE=1 SV=1
Length = 539
Score = 31.6 bits (70), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 12/74 (16%)
Query: 3 EASSSSTHRGSAY----LNALTQEIEKKLQRALASPSQRR--------NLLQELFADIAL 50
+ + S HR S Y L + + KK+Q ASPS++R QE+ + I+
Sbjct: 371 DGDTVSVHRPSFYADRFLKFMNSRVFKKIQALKASPSKKRCNSIAALKATSQEIVSSISQ 430
Query: 51 EVDDRARDIILSGE 64
E D RD++ G+
Sbjct: 431 EWKDEKRDLLTEGQ 444
>sp|O14986|PI51B_HUMAN Phosphatidylinositol 4-phosphate 5-kinase type-1 beta OS=Homo
sapiens GN=PIP5K1B PE=1 SV=2
Length = 540
Score = 31.6 bits (70), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 12/74 (16%)
Query: 3 EASSSSTHRGSAY----LNALTQEIEKKLQRALASPSQRR--------NLLQELFADIAL 50
+ + S HR S Y L + + KK+Q ASPS++R QE+ + I+
Sbjct: 371 DGDTVSVHRPSFYADRFLKFMNSRVFKKIQALKASPSKKRCNSIAALKATSQEIVSSISQ 430
Query: 51 EVDDRARDIILSGE 64
E D RD++ G+
Sbjct: 431 EWKDEKRDLLTEGQ 444
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.139 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,156,217
Number of Sequences: 539616
Number of extensions: 3729236
Number of successful extensions: 11681
Number of sequences better than 100.0: 5
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 11676
Number of HSP's gapped (non-prelim): 8
length of query: 273
length of database: 191,569,459
effective HSP length: 116
effective length of query: 157
effective length of database: 128,974,003
effective search space: 20248918471
effective search space used: 20248918471
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)