Query 024034
Match_columns 273
No_of_seqs 21 out of 23
Neff 3.1
Searched_HMMs 29240
Date Mon Mar 25 17:04:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024034.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024034hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3n1e_A Vacuolar protein sortin 34.6 1E+02 0.0036 25.4 6.7 49 9-58 47-98 (141)
2 1dw9_A Cyanate lyase; cyanate 33.3 34 0.0012 29.0 3.6 39 50-88 65-104 (156)
3 4exj_A Uncharacterized protein 17.3 1.1E+02 0.0036 24.7 3.5 42 218-259 152-207 (238)
4 3vk9_A Glutathione S-transfera 16.0 1.4E+02 0.0047 23.7 3.8 40 218-257 145-191 (216)
5 3ik7_A Glutathione S-transfera 15.9 1.7E+02 0.0058 22.9 4.3 50 206-258 135-192 (222)
6 3gtu_B Glutathione S-transfera 15.7 1.6E+02 0.0053 23.3 4.1 40 219-258 148-195 (224)
7 3qav_A RHO-class glutathione S 15.0 1.4E+02 0.0047 24.2 3.7 50 206-259 164-221 (243)
8 2x64_A Glutathione-S-transfera 14.6 1.6E+02 0.0053 22.8 3.7 40 219-258 149-195 (207)
9 1v2a_A Glutathione transferase 14.3 1.5E+02 0.005 23.1 3.5 49 206-259 134-190 (210)
10 4iel_A Glutathione S-transfera 14.3 2E+02 0.0068 22.9 4.4 49 206-258 163-218 (229)
No 1
>3n1e_A Vacuolar protein sorting-associated protein 54; spinal muscular atrophy, vesicle trafficking, golgi apparatu tethering complex, GARP.; 1.70A {Mus musculus} PDB: 3n1b_A
Probab=34.63 E-value=1e+02 Score=25.45 Aligned_cols=49 Identities=14% Similarity=0.234 Sum_probs=41.1
Q ss_pred CCCCchHHHHHHHHHHHHHHHHhc---CchhHHHHHHHHHhhhhhhhchHHHH
Q 024034 9 THRGSAYLNALTQEIEKKLQRALA---SPSQRRNLLQELFADIALEVDDRARD 58 (273)
Q Consensus 9 ~~~~s~~~~~L~~ei~kkL~~Al~---s~~qr~~ll~eLFaDial~vDdra~~ 58 (273)
+|-.|.|.+.|++|+- |||+||. .++|=+.|...+|+...-.+.+..+.
T Consensus 47 ~pvpS~~m~tl~Ke~~-kLH~~Ls~~LP~~~v~~Im~~Vf~~fk~~l~~~~~~ 98 (141)
T 3n1e_A 47 APVPSPCFRNICKQMT-KMHEAIFDLLPEEQTQMLFLRINASYKLHLKKQLSH 98 (141)
T ss_dssp SSSSCHHHHHHHHHHH-HHHHHHTTTSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHH-HHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4568899999999985 7999999 55899999999999888777776655
No 2
>1dw9_A Cyanate lyase; cyanate degradation, structural genomics, PSI, protei structure initiative, midwest center for structural genomic; HET: SO4; 1.65A {Escherichia coli} SCOP: a.35.1.4 d.72.1.1 PDB: 1dwk_A* 2ivq_A 2ivb_A 2iu7_A 2iv1_A 2iuo_A 2ivg_A
Probab=33.26 E-value=34 Score=28.96 Aligned_cols=39 Identities=18% Similarity=0.232 Sum_probs=23.3
Q ss_pred hhhchHHHHhhhcCCCCCCCCCcCCCCcchh-HHHHHHHH
Q 024034 50 LEVDDRARDIILSGEEGGICPAEDGIDSRLC-FYDVLADH 88 (273)
Q Consensus 50 l~vDdra~~~i~~~~~d~Is~~~~~~~~~~c-fYevLA~Y 88 (273)
|.+|+.+..++...-.-+-.+..--.||-+| |||++..|
T Consensus 65 LgL~~e~~~~l~~~P~rg~~~~~~ptdP~iYR~yE~v~vY 104 (156)
T 1dw9_A 65 LDLDEDSILLLQMIPLRGCIDDRIPTDPTMYRFYEMLQVY 104 (156)
T ss_dssp TTCCHHHHHHTTSBCCCCCCSSSSCCSHHHHHHHHHHHHH
T ss_pred hCcCHHHHHHHhcCCcCCCCCCCCCCCCeehhHHHHHHHh
Confidence 4667777665543322222222223378999 99999988
No 3
>4exj_A Uncharacterized protein; transferase-like protein, transcription regulation, transfer structural genomics; 1.64A {Lodderomyces elongisporus nrrl yb-4239}
Probab=17.29 E-value=1.1e+02 Score=24.74 Aligned_cols=42 Identities=12% Similarity=0.249 Sum_probs=32.6
Q ss_pred CcccccC---CCccchHH-HHHHHhhhhcc--h--------hHHHHHHHHhhhhcc
Q 024034 218 PNAFLVG---GSADFFVI-EVADQLQKLKV--E--------PVLLHYLSQIKVLQG 259 (273)
Q Consensus 218 ~~~Fl~g---g~aD~FV~-ev~dqLqkiK~--E--------~vLLhYL~~~~~lqg 259 (273)
.+.|+.| +.||+.+- .....+..+.. + |-|-.|.++|.-..+
T Consensus 152 ~~~fl~G~~~T~ADi~l~~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~r~~~~p~ 207 (238)
T 4exj_A 152 GRDWFVGDKFTIVDIAFLVGEHRRRERLHNSPIWIDLKENFPNVEKWFQRAIAFEN 207 (238)
T ss_dssp TCSSSSTTSCCHHHHHHHHHHHHHHHHHTTSTTCCCHHHHCHHHHHHHHHHHHSTT
T ss_pred cCCeecCCCCCHHHHHHHHHHHHHHHHcCCCccchhhhhcChHHHHHHHHHHcChh
Confidence 4679999 58999999 88888766542 2 889999999976544
No 4
>3vk9_A Glutathione S-transferase delta; glutathione binding; 2.00A {Bombyx mori}
Probab=16.00 E-value=1.4e+02 Score=23.67 Aligned_cols=40 Identities=15% Similarity=0.321 Sum_probs=31.6
Q ss_pred CcccccC---CCccchHHHHHHHhhhhcch----hHHHHHHHHhhhh
Q 024034 218 PNAFLVG---GSADFFVIEVADQLQKLKVE----PVLLHYLSQIKVL 257 (273)
Q Consensus 218 ~~~Fl~g---g~aD~FV~ev~dqLqkiK~E----~vLLhYL~~~~~l 257 (273)
.+.|+.| +.||+.+...+..+.....+ |-|-.|.++|+-.
T Consensus 145 ~~~~l~G~~~t~ADi~~~~~l~~~~~~~~~~~~~P~l~~w~~r~~a~ 191 (216)
T 3vk9_A 145 GQKYVAGPNLTVADLSLIASVSSLEASDIDFKKYANVKRWYETVKST 191 (216)
T ss_dssp TCSBTTBSSCCHHHHHHHHHHHHGGGTTCCGGGSHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHcCCCchhCHHHHHHHHHHHcc
Confidence 4679998 48999999999988776543 6788999988643
No 5
>3ik7_A Glutathione S-transferase A4; human GST A4-4, enzyme, cytoplasm, polymorphism; HET: BOB; 1.97A {Homo sapiens} PDB: 1gum_A 1gul_A*
Probab=15.88 E-value=1.7e+02 Score=22.92 Aligned_cols=50 Identities=24% Similarity=0.416 Sum_probs=36.0
Q ss_pred hHHHHHhhCCCCCcccccC---CCccchHHHHHHHhhhhcch-----hHHHHHHHHhhhhc
Q 024034 206 KLESFLKQFPVFPNAFLVG---GSADFFVIEVADQLQKLKVE-----PVLLHYLSQIKVLQ 258 (273)
Q Consensus 206 ~L~~fl~~fP~~~~~Fl~g---g~aD~FV~ev~dqLqkiK~E-----~vLLhYL~~~~~lq 258 (273)
.++..++. -.+.|+.| +.||+.+-.....+..+..+ |-|-.|.++|.-..
T Consensus 135 ~le~~L~~---~~~~~l~G~~~t~ADi~l~~~l~~~~~~~~~~~~~~p~l~~w~~~~~~~p 192 (222)
T 3ik7_A 135 VFEKILRG---HGQSFLVGNQLSLADVILLQTILALEEKIPNILSAFPFLQEYTVKLSNIP 192 (222)
T ss_dssp HHHHHHHH---SCCSSSSTTSCCHHHHHHHHHHHHHHHHSTTTTTTCHHHHHHHHHHHTSH
T ss_pred HHHHHHHH---CCCceecCCCCCHHHHHHHHHHHHHHhhChhhhhcChHHHHHHHHHHcCH
Confidence 34444532 35689998 48999999998888766432 78999999987653
No 6
>3gtu_B Glutathione S-transferase; conjugation, detoxification, cytosolic, heterodimer; 2.80A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5
Probab=15.68 E-value=1.6e+02 Score=23.34 Aligned_cols=40 Identities=20% Similarity=0.449 Sum_probs=31.4
Q ss_pred cccccC---CCccchHHHHHHHhhhhcch-----hHHHHHHHHhhhhc
Q 024034 219 NAFLVG---GSADFFVIEVADQLQKLKVE-----PVLLHYLSQIKVLQ 258 (273)
Q Consensus 219 ~~Fl~g---g~aD~FV~ev~dqLqkiK~E-----~vLLhYL~~~~~lq 258 (273)
+.|+.| +.||+.+......+..+..+ |-|-.|.+++.-..
T Consensus 148 ~~~l~G~~~t~ADi~l~~~l~~~~~~~~~~~~~~p~l~~w~~~~~~~p 195 (224)
T 3gtu_B 148 FSWFAGEKLTFVDFLTYDILDQNRIFDPKCLDEFPNLKAFMCRFEALE 195 (224)
T ss_dssp CSBTTBSSCCHHHHHHHHHHHHHHHHCGGGGTTCHHHHHHHHHHHTSH
T ss_pred CCcccCCCCcHHHHHHHHHHHHHHhhChhhhccCcHHHHHHHHHHcCH
Confidence 578888 48999999998888766432 78999999986553
No 7
>3qav_A RHO-class glutathione S-transferase; cytosol; 2.10A {Laternula elliptica} PDB: 3qaw_A*
Probab=15.04 E-value=1.4e+02 Score=24.15 Aligned_cols=50 Identities=20% Similarity=0.349 Sum_probs=36.3
Q ss_pred hHHHHHhhCCCCCcccccC---CCccchHHHHHHHhhhhcc-----hhHHHHHHHHhhhhcc
Q 024034 206 KLESFLKQFPVFPNAFLVG---GSADFFVIEVADQLQKLKV-----EPVLLHYLSQIKVLQG 259 (273)
Q Consensus 206 ~L~~fl~~fP~~~~~Fl~g---g~aD~FV~ev~dqLqkiK~-----E~vLLhYL~~~~~lqg 259 (273)
.++..+.. .+.|+.| +.||+.+-.....+..... =|-|-.|.++|.-..+
T Consensus 164 ~le~~L~~----~~~fl~Gd~~T~ADi~l~~~l~~~~~~~~~~~~~~P~L~~w~~r~~~~p~ 221 (243)
T 3qav_A 164 HWENYLKQ----TGGFVATKEFTMADVFFFPMVALIVRQGANLKDSYPNIFKYYNMMMDRPT 221 (243)
T ss_dssp HHHHHHHH----HSSSSSSSSCCHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHTSHH
T ss_pred HHHHHHhc----CCCcccCCCCcHHHHHHHHHHHHHHHcCCccccCCchHHHHHHHHHcChH
Confidence 44555553 4678888 4899999988888766543 2789999999876543
No 8
>2x64_A Glutathione-S-transferase; detoxification enzyme; HET: GSH; 2.30A {Xylella fastidiosa}
Probab=14.61 E-value=1.6e+02 Score=22.80 Aligned_cols=40 Identities=15% Similarity=0.238 Sum_probs=30.2
Q ss_pred cccccC---CCccchHHHHHHHhhhhcc----hhHHHHHHHHhhhhc
Q 024034 219 NAFLVG---GSADFFVIEVADQLQKLKV----EPVLLHYLSQIKVLQ 258 (273)
Q Consensus 219 ~~Fl~g---g~aD~FV~ev~dqLqkiK~----E~vLLhYL~~~~~lq 258 (273)
+.|+.| +.||+.+-.....+..... =|-|-.|.++|.-..
T Consensus 149 ~~~l~G~~~t~ADi~~~~~l~~~~~~~~~~~~~p~l~~w~~~~~~~p 195 (207)
T 2x64_A 149 HNWLANGQRSGADAYLYVTLRWAKKVGVDLSSLDALSAFFERMEADP 195 (207)
T ss_dssp CSSSSTTSCCHHHHHHHHHHHHHHHHTCCCTTCHHHHHHHHHHHTCH
T ss_pred CCcccCCCccHHHHHHHHHHHHHHHhCCChhhCHHHHHHHHHHHcCH
Confidence 678888 4899999888887765432 278899999887543
No 9
>1v2a_A Glutathione transferase GST1-6; glutathione S-transferase, detoxification, xenobiotics; HET: GTS; 2.15A {Anopheles dirus} SCOP: a.45.1.1 c.47.1.5
Probab=14.27 E-value=1.5e+02 Score=23.09 Aligned_cols=49 Identities=22% Similarity=0.401 Sum_probs=35.4
Q ss_pred hHHHHHhhCCCCCcccccC---CCccchHHHHHHHhhhhcc----hhHHHHHHHHhhh-hcc
Q 024034 206 KLESFLKQFPVFPNAFLVG---GSADFFVIEVADQLQKLKV----EPVLLHYLSQIKV-LQG 259 (273)
Q Consensus 206 ~L~~fl~~fP~~~~~Fl~g---g~aD~FV~ev~dqLqkiK~----E~vLLhYL~~~~~-lqg 259 (273)
.|+..+.. +.|+.| +.||+.+-.....+..... =|-|..|.++|.- +.+
T Consensus 134 ~le~~L~~-----~~~l~G~~~t~ADi~l~~~l~~~~~~~~~~~~~p~l~~w~~~~~~~~p~ 190 (210)
T 1v2a_A 134 LLEQFVTE-----RAYAAADHLTVADICLLGTVTALNWLKHDLEPFPHIRAWLERVRAEMPD 190 (210)
T ss_dssp HHHHHHHH-----SSSSSSSSCCHHHHHHHHHHHGGGTTTCCCTTCHHHHHHHHHHHTTSTT
T ss_pred HHHHHHcc-----CCcccCCCCCHHHHHHHHHHHHHHhcCCChhhCchHHHHHHHHHHHCcc
Confidence 45555553 568888 4899999998888766532 2789999999875 444
No 10
>4iel_A Glutathione S-transferase, N-terminal domain PROT; GST, glutathione S-transferase, enzyme function initiative, structural genomics; HET: GSH; 1.60A {Burkholderia ambifaria}
Probab=14.27 E-value=2e+02 Score=22.88 Aligned_cols=49 Identities=18% Similarity=0.232 Sum_probs=35.1
Q ss_pred hHHHHHhhCCCCCcccccC---CCccchHHHHHHHhhhhcc----hhHHHHHHHHhhhhc
Q 024034 206 KLESFLKQFPVFPNAFLVG---GSADFFVIEVADQLQKLKV----EPVLLHYLSQIKVLQ 258 (273)
Q Consensus 206 ~L~~fl~~fP~~~~~Fl~g---g~aD~FV~ev~dqLqkiK~----E~vLLhYL~~~~~lq 258 (273)
.++..+.. .+.|+.| +.||+.+-.....+..... =|-|-.|.++|.-..
T Consensus 163 ~le~~L~~----~g~fl~G~~~t~ADi~l~~~l~~~~~~~~~~~~~p~l~~w~~~~~~~p 218 (229)
T 4iel_A 163 VLNAQLEA----TGAFVAGDHFTLADIPIGLSVNRWFGTPFEHPDFPAAKRYIERLATRE 218 (229)
T ss_dssp HHHHHHHH----HSSSSSSSSCCTTHHHHHHHHHHHHTSCSCCCCCHHHHHHHHHHTTSH
T ss_pred HHHHHHhc----CCCEecCCCCCHHHHHHHHHHHHHHcCCCCcccChhHHHHHHHHHcCH
Confidence 45555554 1278998 4899999998887766543 288999999986543
Done!