Query 024038
Match_columns 273
No_of_seqs 194 out of 428
Neff 4.6
Searched_HMMs 13730
Date Mon Mar 25 17:08:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024038.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/024038hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2uyza1 d.20.1.1 (A:3-158) Ubi 54.9 11 0.00082 28.8 6.0 49 55-103 20-68 (156)
2 d1fzya_ d.20.1.1 (A:) Ubiquiti 47.8 18 0.0013 27.2 6.0 36 68-103 28-63 (149)
3 d1jatb_ d.20.1.1 (B:) Ubiquiti 42.4 24 0.0018 26.5 6.0 37 67-103 33-69 (136)
4 d2e2ca_ d.20.1.1 (A:) Ubiquiti 41.1 22 0.0016 27.2 5.6 35 69-103 36-70 (156)
5 d2f4za1 d.20.1.1 (A:32-192) Hy 40.9 24 0.0018 27.0 5.9 36 68-103 40-75 (161)
6 d1zyma1 a.60.10.1 (A:22-144) E 40.0 19 0.0014 26.3 4.9 28 233-260 16-43 (123)
7 d2awfa1 d.20.1.1 (A:7-131) Ubi 38.8 30 0.0022 25.2 5.9 36 68-103 26-61 (125)
8 d2a4da1 d.20.1.1 (A:82-220) Ub 36.3 54 0.0039 24.4 7.2 37 67-103 34-70 (139)
9 d1yrva1 d.20.1.1 (A:1-148) Ubi 36.3 31 0.0022 26.1 5.7 35 69-103 31-65 (148)
10 d2bepa1 d.20.1.1 (A:1-154) Ubi 33.1 39 0.0028 25.3 5.9 36 68-103 33-68 (154)
11 d1yf2a2 d.287.1.2 (A:221-425) 32.9 29 0.0021 25.1 5.0 30 234-263 159-188 (205)
12 d1pzva_ d.20.1.1 (A:) Ubiquiti 32.5 31 0.0023 26.1 5.2 34 69-102 28-61 (161)
13 d1ayza_ d.20.1.1 (A:) Ubiquiti 31.4 44 0.0032 24.7 5.9 34 69-102 30-63 (153)
14 d1i7ka_ d.20.1.1 (A:) Ubiquiti 31.1 44 0.0032 24.9 5.9 35 68-102 27-61 (146)
15 d2ucza_ d.20.1.1 (A:) Ubiquiti 31.1 46 0.0034 25.0 6.0 35 68-102 30-64 (164)
16 d1j7db_ d.20.1.1 (B:) Ubiquiti 30.2 45 0.0033 24.8 5.8 36 68-103 28-63 (149)
17 d1yf9a1 d.20.1.1 (A:13-170) Ub 30.2 36 0.0026 26.0 5.2 35 69-103 23-57 (158)
18 d1zdna1 d.20.1.1 (A:6-156) Ubi 30.1 43 0.0031 25.1 5.7 35 69-103 33-67 (151)
19 d1z3da1 d.20.1.1 (A:2-150) Ubi 29.8 49 0.0036 24.5 5.9 35 69-103 30-64 (149)
20 d2azeb1 e.63.1.2 (B:201-301) T 29.6 35 0.0026 24.7 4.8 31 233-263 7-37 (101)
21 d2z5da1 d.20.1.1 (A:23-174) Ub 29.0 32 0.0023 25.9 4.7 35 69-103 26-60 (152)
22 d1ydxa1 d.287.1.2 (A:1-193) Bi 28.9 37 0.0027 24.8 5.0 31 234-264 144-174 (193)
23 d1nkpa_ a.38.1.1 (A:) Myc prot 28.0 52 0.0038 22.4 5.3 36 233-268 51-86 (88)
24 d1yh2a1 d.20.1.1 (A:1-154) Ubi 26.8 52 0.0038 24.3 5.6 35 69-103 29-63 (154)
25 d2fo3a1 d.20.1.1 (A:9-117) Put 25.7 66 0.0048 22.7 5.8 35 68-102 24-58 (109)
26 d1fxkc_ a.2.5.1 (C:) Prefoldin 25.5 51 0.0037 23.7 5.2 32 236-267 97-128 (133)
27 d1jata_ d.20.1.1 (A:) Ubiquiti 25.1 66 0.0048 24.0 5.9 36 68-103 29-64 (152)
28 d1ivsa1 a.2.7.3 (A:797-862) Va 24.7 46 0.0034 21.6 4.3 25 234-258 4-28 (66)
29 d1z2ua1 d.20.1.1 (A:1-147) Ubi 24.3 71 0.0051 23.3 5.9 36 68-103 27-62 (147)
30 d1ydxa2 d.287.1.2 (A:194-374) 24.0 52 0.0038 23.8 5.0 31 234-264 139-169 (181)
31 d1e43a1 b.71.1.1 (A:394-483) B 23.7 9.4 0.00069 27.7 0.5 14 112-125 66-79 (90)
32 d2a7la1 d.20.1.1 (A:1-117) Ubi 22.1 82 0.006 22.2 5.7 36 68-103 31-66 (117)
33 d2d3na1 b.71.1.1 (A:399-485) B 22.0 11 0.00078 27.2 0.5 14 112-125 63-76 (87)
No 1
>d2uyza1 d.20.1.1 (A:3-158) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubc9 [TaxId: 9606]}
Probab=54.86 E-value=11 Score=28.85 Aligned_cols=49 Identities=10% Similarity=0.171 Sum_probs=34.2
Q ss_pred EccceEEcCCCCCCCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 024038 55 YGNVAFWLGKKASEYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 103 (273)
Q Consensus 55 ~Gn~A~~l~kk~~~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 103 (273)
+|-.|.+.....+..+...|.+.+.|+.+.....-+=++.+.+.+.|+.
T Consensus 20 ~g~~~~p~~~~~~~~n~~~W~~~i~gp~gtpY~gg~f~~~i~fp~~YP~ 68 (156)
T d2uyza1 20 FGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPS 68 (156)
T ss_dssp TTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTS
T ss_pred CCeEEEecCCCCCCCcccEEEEEEEcCCCCCccCCEEEEEEeCCccccC
Confidence 4666666554445568999999999987654333333788888888873
No 2
>d1fzya_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc1 [TaxId: 4932]}
Probab=47.76 E-value=18 Score=27.16 Aligned_cols=36 Identities=8% Similarity=-0.073 Sum_probs=28.5
Q ss_pred CCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 024038 68 EYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 103 (273)
Q Consensus 68 ~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 103 (273)
++..+.|.+.+.|+.+.....-+=++.+.+.+.|+.
T Consensus 28 ~~~~~~w~~~I~gp~~t~y~gg~f~~~i~fp~~YP~ 63 (149)
T d1fzya_ 28 ESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPF 63 (149)
T ss_dssp SSCSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTS
T ss_pred CCchhEEEEEEEcCCCCCCCCCceeEEEEecCCccc
Confidence 457889999999987755555566899999999984
No 3
>d1jatb_ d.20.1.1 (B:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), mms2 [TaxId: 4932]}
Probab=42.36 E-value=24 Score=26.50 Aligned_cols=37 Identities=11% Similarity=0.221 Sum_probs=28.0
Q ss_pred CCCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 024038 67 SEYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 103 (273)
Q Consensus 67 ~~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 103 (273)
++...++|.+.+.|+.+.....-+=++.+.+-+.|+.
T Consensus 33 dd~~l~~W~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~ 69 (136)
T d1jatb_ 33 DDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPD 69 (136)
T ss_dssp TCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTT
T ss_pred CCCceeEEEEEEECCCCChhhcCEEEEEEEecCCCCC
Confidence 3457999999999987755444455788888888874
No 4
>d2e2ca_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Clam (Spisula solidissima), E-2C [TaxId: 6584]}
Probab=41.09 E-value=22 Score=27.17 Aligned_cols=35 Identities=11% Similarity=0.253 Sum_probs=27.2
Q ss_pred CCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 024038 69 YQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 103 (273)
Q Consensus 69 ~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 103 (273)
++.+.|.+.+.|+.+.....-+=++.+.+-+.|+.
T Consensus 36 ~dl~~W~~~i~Gp~~t~yegg~f~~~i~fp~~YP~ 70 (156)
T d2e2ca_ 36 DNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPY 70 (156)
T ss_dssp SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTS
T ss_pred CcccEEEEEEEcCCccccCCCEEEEEEEecCCCCC
Confidence 57899999999987766554555788888888863
No 5
>d2f4za1 d.20.1.1 (A:32-192) Hypothetical protein Tgtwinscan_2721, E2 domain {Toxoplasma gondii [TaxId: 5811]}
Probab=40.94 E-value=24 Score=27.04 Aligned_cols=36 Identities=8% Similarity=0.134 Sum_probs=27.2
Q ss_pred CCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 024038 68 EYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 103 (273)
Q Consensus 68 ~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 103 (273)
+++.+.|.+.+.|+.+.....=+=++.+.+.+.|+.
T Consensus 40 ~~nl~~W~~~I~Gp~~TpY~gg~f~~~i~fp~~YP~ 75 (161)
T d2f4za1 40 GGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPY 75 (161)
T ss_dssp TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred CCccceeEEEEeCCCCCccCCCEEEEEEeccCCCCC
Confidence 357899999999997755443344888888888875
No 6
>d1zyma1 a.60.10.1 (A:22-144) Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain {Escherichia coli [TaxId: 562]}
Probab=39.99 E-value=19 Score=26.34 Aligned_cols=28 Identities=14% Similarity=0.280 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 024038 233 ADELLQLAAARQQVQAHIAKLKRQISLI 260 (273)
Q Consensus 233 ~~El~~l~~a~~kV~~~i~~lk~~l~~~ 260 (273)
..|+.|+..|..++..++..+++++...
T Consensus 16 ~~E~~rl~~A~~~~~~~L~~l~~~~~~~ 43 (123)
T d1zyma1 16 DQEVERFLSGRAKASAQLETIKTKAGET 43 (123)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5789999999999999999999988654
No 7
>d2awfa1 d.20.1.1 (A:7-131) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 G1 [TaxId: 9606]}
Probab=38.80 E-value=30 Score=25.18 Aligned_cols=36 Identities=11% Similarity=0.225 Sum_probs=26.9
Q ss_pred CCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 024038 68 EYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 103 (273)
Q Consensus 68 ~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 103 (273)
+...+.|.+-|.|+.+..-..-+=++.|.+.+.|+.
T Consensus 26 ~~dl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~ 61 (125)
T d2awfa1 26 DNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPL 61 (125)
T ss_dssp TTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTS
T ss_pred CCCceEEEEEEeCCCCcccCCCeeEEEEecCCCcCC
Confidence 345788999999987665555566778888888874
No 8
>d2a4da1 d.20.1.1 (A:82-220) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 variant 1 [TaxId: 9606]}
Probab=36.31 E-value=54 Score=24.36 Aligned_cols=37 Identities=11% Similarity=0.178 Sum_probs=27.1
Q ss_pred CCCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 024038 67 SEYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 103 (273)
Q Consensus 67 ~~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 103 (273)
.+....+|.+.+.|+.+.....=+=++.+.+-+.|+.
T Consensus 34 ~d~nl~~W~~~I~Gp~~TpYegg~f~~~i~fp~~YP~ 70 (139)
T d2a4da1 34 EDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPE 70 (139)
T ss_dssp TCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred CcccccEEEEEEECCCCCchhcCEEEEEEECCCCCCC
Confidence 4457888999999997765544455677777787764
No 9
>d1yrva1 d.20.1.1 (A:1-148) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 U [TaxId: 9606]}
Probab=36.27 E-value=31 Score=26.06 Aligned_cols=35 Identities=17% Similarity=0.308 Sum_probs=26.5
Q ss_pred CCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 024038 69 YQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 103 (273)
Q Consensus 69 ~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 103 (273)
+..+.|.+.+.|+.+.....-+=++.+.+.+.|+.
T Consensus 31 ~n~~~W~~~i~Gp~~t~yegg~f~~~i~fp~~YP~ 65 (148)
T d1yrva1 31 EDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNY 65 (148)
T ss_dssp TTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTT
T ss_pred CcccEEEEEEEeCCCCccCCCceEEEEEecccccc
Confidence 47889999999987655444444888888888874
No 10
>d2bepa1 d.20.1.1 (A:1-154) Ubiquitin-conjugating enzyme E2-25 kDa, E2 domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=33.13 E-value=39 Score=25.33 Aligned_cols=36 Identities=3% Similarity=-0.032 Sum_probs=26.8
Q ss_pred CCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 024038 68 EYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 103 (273)
Q Consensus 68 ~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 103 (273)
+++...|.+-+.|+.+.....=+=++.+.+.+.|+.
T Consensus 33 ~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~ 68 (154)
T d2bepa1 33 DENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPF 68 (154)
T ss_dssp SSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTS
T ss_pred CCChhheEeeEecCccccccCCeeEEEEeccccccC
Confidence 346778999999987655444444888899998873
No 11
>d1yf2a2 d.287.1.2 (A:221-425) Bipartite methylase S protein MJ0130 {Methanocaldococcus jannaschii [TaxId: 2190]}
Probab=32.95 E-value=29 Score=25.14 Aligned_cols=30 Identities=20% Similarity=0.168 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 024038 234 DELLQLAAARQQVQAHIAKLKRQISLIDGQ 263 (273)
Q Consensus 234 ~El~~l~~a~~kV~~~i~~lk~~l~~~e~~ 263 (273)
+|.++|.+.-.++++.|+.+++++..++..
T Consensus 159 ~eQ~~I~~~l~~id~~i~~~~~~~~~l~~~ 188 (205)
T d1yf2a2 159 EEQKQIAKILSSVDKSIELKKQKKEKLQRM 188 (205)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555666666666777777777777666643
No 12
>d1pzva_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Nematode (Caenorhabditis elegans), E2-19 kDa [TaxId: 6239]}
Probab=32.51 E-value=31 Score=26.07 Aligned_cols=34 Identities=18% Similarity=0.287 Sum_probs=25.8
Q ss_pred CCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCC
Q 024038 69 YQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFN 102 (273)
Q Consensus 69 ~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~ 102 (273)
...+.|.+-|.|+.+.-...-+=++.+.+.+.|+
T Consensus 28 ~dl~~W~~~i~gp~~tpY~gg~f~~~i~fp~~YP 61 (161)
T d1pzva_ 28 NDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYP 61 (161)
T ss_dssp TCTTEEEEEEECCTTSSCSSCEEEEEEECCTTGG
T ss_pred CCceEEEEEEECCcchhhcCCEEEEEEeCCCCCC
Confidence 4578999999998765554556677888888886
No 13
>d1ayza_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc2 (RAD6) [TaxId: 4932]}
Probab=31.42 E-value=44 Score=24.70 Aligned_cols=34 Identities=9% Similarity=0.229 Sum_probs=26.2
Q ss_pred CCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCC
Q 024038 69 YQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFN 102 (273)
Q Consensus 69 ~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~ 102 (273)
++...|.+.+.|+.+.....-+=++.+.+.+.|+
T Consensus 30 ~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP 63 (153)
T d1ayza_ 30 DNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYP 63 (153)
T ss_dssp TEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTT
T ss_pred CcHHhHhheeeCCCCCccCCCEEEEEEecCcccc
Confidence 4789999999998765544444588888888876
No 14
>d1i7ka_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubch10 [TaxId: 9606]}
Probab=31.13 E-value=44 Score=24.93 Aligned_cols=35 Identities=14% Similarity=0.233 Sum_probs=25.9
Q ss_pred CCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCC
Q 024038 68 EYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFN 102 (273)
Q Consensus 68 ~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~ 102 (273)
+++.+.|.+-+.|+.+.....-+=++.+.+-+.|+
T Consensus 27 ~~d~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP 61 (146)
T d1i7ka_ 27 SDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYP 61 (146)
T ss_dssp TTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTT
T ss_pred CCcccEEEEEEecCccccccCCEEEEEEEecCCCC
Confidence 35799999999998765443344477888888886
No 15
>d2ucza_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc7 [TaxId: 4932]}
Probab=31.08 E-value=46 Score=25.05 Aligned_cols=35 Identities=11% Similarity=0.293 Sum_probs=26.1
Q ss_pred CCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCC
Q 024038 68 EYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFN 102 (273)
Q Consensus 68 ~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~ 102 (273)
+++...|.+.|.|+.+.....=+=++.+.+.+.|+
T Consensus 30 e~nl~~w~~~I~Gp~~tpy~gg~f~~~i~fp~~YP 64 (164)
T d2ucza_ 30 ENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYP 64 (164)
T ss_dssp SSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTT
T ss_pred ccchhhhheeeeCCCcccccCCeeEEEEecCCCCC
Confidence 44678999999998775544445577778888887
No 16
>d1j7db_ d.20.1.1 (B:) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubc13 [TaxId: 9606]}
Probab=30.22 E-value=45 Score=24.82 Aligned_cols=36 Identities=11% Similarity=0.129 Sum_probs=26.4
Q ss_pred CCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 024038 68 EYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 103 (273)
Q Consensus 68 ~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 103 (273)
+++...|.+.|.|+.+..-..-+=++.+.+.+.|+.
T Consensus 28 ~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~ 63 (149)
T d1j7db_ 28 ESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPM 63 (149)
T ss_dssp SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred CCcccEeeeEEECCcccccCCCEEEEEEecCCcccC
Confidence 346778999999987655443344888888888874
No 17
>d1yf9a1 d.20.1.1 (A:13-170) Ubiquitin conjugating enzyme, UBC {Leishmania major [TaxId: 5664]}
Probab=30.19 E-value=36 Score=25.96 Aligned_cols=35 Identities=14% Similarity=0.004 Sum_probs=27.7
Q ss_pred CCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 024038 69 YQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 103 (273)
Q Consensus 69 ~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 103 (273)
+...+|.|-+.|+.+.....-+=++.+.+-+.|+.
T Consensus 23 d~~~~w~v~i~Gp~~TpY~gg~f~~~i~fp~~YP~ 57 (158)
T d1yf9a1 23 DTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPF 57 (158)
T ss_dssp SSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred CCceEEEEEEECCCCCCccCcEEEEEEECcccchh
Confidence 57889999999998766544455788889899984
No 18
>d1zdna1 d.20.1.1 (A:6-156) Ubiquitin conjugating enzyme, UBC {Human(Homo sapiens), E2 S [TaxId: 9606]}
Probab=30.14 E-value=43 Score=25.13 Aligned_cols=35 Identities=14% Similarity=0.117 Sum_probs=26.0
Q ss_pred CCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 024038 69 YQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 103 (273)
Q Consensus 69 ~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 103 (273)
+....|.+.+.|+.+..-..-+=++.+.+-+.|+.
T Consensus 33 ~dl~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~ 67 (151)
T d1zdna1 33 EDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPA 67 (151)
T ss_dssp SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred cchheeEEEEecCCCcCccCCceeeeeecCCCCCC
Confidence 45788999999987755444555677888888874
No 19
>d1z3da1 d.20.1.1 (A:2-150) Ubiquitin conjugating enzyme, UBC {Nematode (Caenorhabditis elegans), E2-21.5 kDa [TaxId: 6239]}
Probab=29.77 E-value=49 Score=24.54 Aligned_cols=35 Identities=9% Similarity=0.193 Sum_probs=27.6
Q ss_pred CCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 024038 69 YQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 103 (273)
Q Consensus 69 ~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 103 (273)
++...|.+.+.|+.+.....-+=++.+.+.+.|+.
T Consensus 30 ~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~ 64 (149)
T d1z3da1 30 DNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPN 64 (149)
T ss_dssp TEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred CchhhhceeEECCCCccccCCEEEEEEEecCcCCC
Confidence 47889999999987765555556889999999974
No 20
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.56 E-value=35 Score=24.69 Aligned_cols=31 Identities=23% Similarity=0.330 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 024038 233 ADELLQLAAARQQVQAHIAKLKRQISLIDGQ 263 (273)
Q Consensus 233 ~~El~~l~~a~~kV~~~i~~lk~~l~~~e~~ 263 (273)
++|+..|.+..+.++..|..+.++|+.+-..
T Consensus 7 ~~El~~L~~~E~~LD~li~~~~~~L~~lted 37 (101)
T d2azeb1 7 TQDLRQLQESEQQLDHLMNICTTQLRLLSED 37 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 6899999999999999999999999887643
No 21
>d2z5da1 d.20.1.1 (A:23-174) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 H [TaxId: 9606]}
Probab=28.99 E-value=32 Score=25.86 Aligned_cols=35 Identities=9% Similarity=0.037 Sum_probs=25.9
Q ss_pred CCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 024038 69 YQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 103 (273)
Q Consensus 69 ~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 103 (273)
++.++|.|.+.|+.+.....=+=++.+.+-+.|+.
T Consensus 26 ~~l~~w~v~i~Gp~~TpY~gg~f~~~i~fp~~YP~ 60 (152)
T d2z5da1 26 GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPF 60 (152)
T ss_dssp EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTT
T ss_pred CChheEEEEEEcCCCCCcCCCEEEEEEEecCCCCC
Confidence 36778999999987655444444788888888874
No 22
>d1ydxa1 d.287.1.2 (A:1-193) Bipartite methylase S protein MG438 {Mycoplasma genitalium [TaxId: 2097]}
Probab=28.92 E-value=37 Score=24.79 Aligned_cols=31 Identities=13% Similarity=0.150 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 024038 234 DELLQLAAARQQVQAHIAKLKRQISLIDGQQ 264 (273)
Q Consensus 234 ~El~~l~~a~~kV~~~i~~lk~~l~~~e~~~ 264 (273)
+|.++|...-..+++.|+.++++++.++...
T Consensus 144 ~eQ~~I~~~l~~ld~~i~~~~~~i~~l~~~~ 174 (193)
T d1ydxa1 144 NEQHAIANTLSVFDERLENLASLIEINRKLR 174 (193)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555555556666666666666665443
No 23
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.01 E-value=52 Score=22.38 Aligned_cols=36 Identities=17% Similarity=0.241 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 024038 233 ADELLQLAAARQQVQAHIAKLKRQISLIDGQQQQLR 268 (273)
Q Consensus 233 ~~El~~l~~a~~kV~~~i~~lk~~l~~~e~~~~~~k 268 (273)
.+-+..|..-......+++.++.+...+..++++|.
T Consensus 51 ~~yI~~L~~~~~~l~~~~~~l~~~~~~L~~~l~~L~ 86 (88)
T d1nkpa_ 51 TAYILSVQAEEQKLISEEDLLRKRREQLKHKLEQLG 86 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 455666666666777777778888877777777765
No 24
>d1yh2a1 d.20.1.1 (A:1-154) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 T [TaxId: 9606]}
Probab=26.82 E-value=52 Score=24.34 Aligned_cols=35 Identities=9% Similarity=0.032 Sum_probs=27.2
Q ss_pred CCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 024038 69 YQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 103 (273)
Q Consensus 69 ~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 103 (273)
+....|.+.+.|+.+.....=+=++.+.+-+.|+.
T Consensus 29 ~~~~~w~~~I~Gp~~TpY~gg~f~~~i~~p~~YP~ 63 (154)
T d1yh2a1 29 DQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPF 63 (154)
T ss_dssp SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTS
T ss_pred cchhhhhceEeCCCCCCCCCCEEEEEEecCccccC
Confidence 46789999999998765555566778888888863
No 25
>d2fo3a1 d.20.1.1 (A:9-117) Putative ubiquitin-conjugating enzyme, E2 domain {Plasmodium chabaudi [TaxId: 5825]}
Probab=25.66 E-value=66 Score=22.67 Aligned_cols=35 Identities=11% Similarity=0.144 Sum_probs=23.3
Q ss_pred CCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCC
Q 024038 68 EYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFN 102 (273)
Q Consensus 68 ~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~ 102 (273)
++..++|.+.+.|+.+..-..-+=++.+.+-+.|+
T Consensus 24 ~~~~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP 58 (109)
T d2fo3a1 24 PNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYP 58 (109)
T ss_dssp TTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTT
T ss_pred CCcccEEEEEEecCchhhhcCCCceEEEEeccccC
Confidence 34678999999998764433334456666666665
No 26
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=25.48 E-value=51 Score=23.74 Aligned_cols=32 Identities=13% Similarity=0.202 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 024038 236 LLQLAAARQQVQAHIAKLKRQISLIDGQQQQL 267 (273)
Q Consensus 236 l~~l~~a~~kV~~~i~~lk~~l~~~e~~~~~~ 267 (273)
++.|.....++.++++++++++..++.+++++
T Consensus 97 i~~l~~~~~~l~~~~~~~~~~i~~l~~~~~~l 128 (133)
T d1fxkc_ 97 KNELESTLQKMGENLRAITDIMMKLSPQAEEL 128 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566666677777777777777777666554
No 27
>d1jata_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc13 [TaxId: 4932]}
Probab=25.12 E-value=66 Score=23.96 Aligned_cols=36 Identities=11% Similarity=0.093 Sum_probs=27.6
Q ss_pred CCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 024038 68 EYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 103 (273)
Q Consensus 68 ~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 103 (273)
+++...|.+.|.|+.+.....=+=++.+.+-+.|+.
T Consensus 29 ~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~ 64 (152)
T d1jata_ 29 DDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPM 64 (152)
T ss_dssp TTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTT
T ss_pred CCccchhheeeeCCchhhhcCCEEEEEEecCccCCC
Confidence 458899999999987755544566788888888873
No 28
>d1ivsa1 a.2.7.3 (A:797-862) Valyl-tRNA synthetase (ValRS) C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=24.71 E-value=46 Score=21.60 Aligned_cols=25 Identities=8% Similarity=0.082 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 024038 234 DELLQLAAARQQVQAHIAKLKRQIS 258 (273)
Q Consensus 234 ~El~~l~~a~~kV~~~i~~lk~~l~ 258 (273)
.|+.||..-..+++.+|..+..+|.
T Consensus 4 ~E~~RL~K~l~kl~~~i~~~~~kL~ 28 (66)
T d1ivsa1 4 EWRRRQEKRLKELLALAERSQRKLA 28 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 5778888888888888877777664
No 29
>d1z2ua1 d.20.1.1 (A:1-147) Ubiquitin conjugating enzyme, UBC {Caenorhabditis elegans, E2 2 [TaxId: 6239]}
Probab=24.34 E-value=71 Score=23.30 Aligned_cols=36 Identities=6% Similarity=0.103 Sum_probs=26.8
Q ss_pred CCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 024038 68 EYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 103 (273)
Q Consensus 68 ~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 103 (273)
+++...|.+.+.|+.+.....-+=++.+.+-+.|+.
T Consensus 27 ~~n~~~w~~~i~gp~~t~y~gg~f~~~i~fp~~YP~ 62 (147)
T d1z2ua1 27 GDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPF 62 (147)
T ss_dssp TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTS
T ss_pred CCchhhhhheecCCCCCCcCCCceEEEEecCcCCCC
Confidence 347889999999987665544555788888888873
No 30
>d1ydxa2 d.287.1.2 (A:194-374) Bipartite methylase S protein MG438 {Mycoplasma genitalium [TaxId: 2097]}
Probab=23.96 E-value=52 Score=23.76 Aligned_cols=31 Identities=6% Similarity=0.050 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 024038 234 DELLQLAAARQQVQAHIAKLKRQISLIDGQQ 264 (273)
Q Consensus 234 ~El~~l~~a~~kV~~~i~~lk~~l~~~e~~~ 264 (273)
+|..+|..--..+++.|+.+++++..++...
T Consensus 139 ~eQ~~I~~~l~~~d~~i~~~~~~i~~l~~lk 169 (181)
T d1ydxa2 139 QLQRKAGKIVFLLDQKLDQYKKELSSLTVIR 169 (181)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555556677777777777777766553
No 31
>d1e43a1 b.71.1.1 (A:394-483) Bacterial alpha-Amylase {Bacillus licheniformis [TaxId: 1402]}
Probab=23.70 E-value=9.4 Score=27.69 Aligned_cols=14 Identities=43% Similarity=1.222 Sum_probs=11.7
Q ss_pred CcEEEeeeEEEEEE
Q 024038 112 PFELSESGWGEFEI 125 (273)
Q Consensus 112 PFeVtE~GWGEFeI 125 (273)
+=.|.|.|||+|.+
T Consensus 66 ~V~id~~G~g~F~v 79 (90)
T d1e43a1 66 PVVINSEGWGEFHV 79 (90)
T ss_dssp CEECCTTSEEEEEE
T ss_pred EEEECCCceEEEEE
Confidence 45678999999987
No 32
>d2a7la1 d.20.1.1 (A:1-117) Ubiquitin-protein ligase W (E2 W) {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.10 E-value=82 Score=22.22 Aligned_cols=36 Identities=17% Similarity=0.239 Sum_probs=25.9
Q ss_pred CCCeeeEEEEEeCCCCCCcccceeeeEEEeCCCCCC
Q 024038 68 EYQSHKWTVYVRGATNEDLGVVIKRAVFQLHSSFNN 103 (273)
Q Consensus 68 ~~~tH~WtVyVr~~~~edls~~IkKV~F~LHpSF~n 103 (273)
+++...|.+-+.|+.+.....-+=++.+.+-+.|+.
T Consensus 31 ~~~l~~w~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~ 66 (117)
T d2a7la1 31 QNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPF 66 (117)
T ss_dssp CCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTT
T ss_pred CCCceEEEEEEeCCCCccccCCeeeEEEecCccccc
Confidence 457889999999987654444444677777777764
No 33
>d2d3na1 b.71.1.1 (A:399-485) Bacterial alpha-Amylase {Bacillus sp. 707 [TaxId: 1416]}
Probab=21.97 E-value=11 Score=27.23 Aligned_cols=14 Identities=29% Similarity=1.021 Sum_probs=11.3
Q ss_pred CcEEEeeeEEEEEE
Q 024038 112 PFELSESGWGEFEI 125 (273)
Q Consensus 112 PFeVtE~GWGEFeI 125 (273)
+=.|.+.|||+|.+
T Consensus 63 ~V~id~~G~g~F~v 76 (87)
T d2d3na1 63 TVTINADGWGNFSV 76 (87)
T ss_dssp EEECCTTSEEEEEE
T ss_pred EEEECCCceEEEEE
Confidence 34577999999987
Done!