Your job contains 1 sequence.
>024039
MDRYQKVEKPKTETAISENELRITAQGRLRNYISYAISLLEEKGANEVVLKATGRAINKT
VMIAELLKRRVVGLHQNTSTGSIDITDVWEPLEEGLLPLETTRHVSAITITLSRKELDSS
SLGYQPPVPTDQVKPLADYDDGRALHGMRDKGRRQARNGGNNNGVPEYNNGHWDGGAGYG
GRGRGRAAGRSFWGHGRRYDGNMQQESEYYNGYGGSGALPPQGRGNCLLAFSCSYSLSFI
LAKQLHGVDKFVFLLFYYFCGLLFVYLPFPFFF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 024039
(273 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2198551 - symbol:AT1G20220 species:3702 "Arabi... 447 2.9e-44 2
TAIR|locus:2204400 - symbol:AT1G76010 species:3702 "Arabi... 446 3.7e-44 2
TAIR|locus:2077547 - symbol:AT3G07030 species:3702 "Arabi... 386 9.2e-36 1
UNIPROTKB|E2R227 - symbol:LOC486757 "Uncharacterized prot... 190 5.4e-15 1
UNIPROTKB|E2RC74 - symbol:C11H9orf23 "Uncharacterized pro... 190 5.4e-15 1
UNIPROTKB|F1SEB9 - symbol:RPP25L "Uncharacterized protein... 190 5.4e-15 1
UNIPROTKB|Q8N5L8 - symbol:RPP25L "Ribonuclease P protein ... 189 6.9e-15 1
RGD|1306576 - symbol:Rpp25l "ribonuclease P/MRP 25 subuni... 189 6.9e-15 1
UNIPROTKB|E1BQE8 - symbol:RPP25 "Uncharacterized protein"... 188 8.8e-15 1
MGI|MGI:1917211 - symbol:Rpp25l "ribonuclease P/MRP 25 su... 188 8.8e-15 1
UNIPROTKB|Q2KIR4 - symbol:RPP25L "Ribonuclease P protein ... 187 1.1e-14 1
DICTYBASE|DDB_G0281409 - symbol:drpp25 "RNase MRP protein... 189 2.3e-14 1
UNIPROTKB|E1C3A2 - symbol:CZH9orf23 "Uncharacterized prot... 164 3.1e-12 1
MGI|MGI:2143151 - symbol:Rpp25 "ribonuclease P/MRP 25 sub... 159 1.0e-11 1
RGD|1305290 - symbol:Rpp25 "ribonuclease P/MRP 25 subunit... 159 1.0e-11 1
UNIPROTKB|F1SJ50 - symbol:RPP25 "Uncharacterized protein"... 158 1.3e-11 1
UNIPROTKB|Q9BUL9 - symbol:RPP25 "Ribonuclease P protein s... 153 4.5e-11 1
UNIPROTKB|E1BK83 - symbol:RPP25 "Uncharacterized protein"... 152 5.8e-11 1
ZFIN|ZDB-GENE-040718-275 - symbol:rpp25l "ribonuclease P/... 132 6.1e-10 2
>TAIR|locus:2198551 [details] [associations]
symbol:AT1G20220 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009505 "plant-type cell wall" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] InterPro:IPR002775 Pfam:PF01918 EMBL:CP002684
GO:GO:0005829 GO:GO:0009506 GO:GO:0003676 GO:GO:0009505
UniGene:At.15439 OMA:EANEVRI EMBL:AF439833 EMBL:BT020430
IPI:IPI00519675 RefSeq:NP_564108.1 HSSP:O28323
ProteinModelPortal:Q944A2 SMR:Q944A2 STRING:Q944A2 PRIDE:Q944A2
EnsemblPlants:AT1G20220.1 GeneID:838610 KEGG:ath:AT1G20220
Genevestigator:Q944A2 Uniprot:Q944A2
Length = 315
Score = 447 (162.4 bits), Expect = 2.9e-44, Sum P(2) = 2.9e-44
Identities = 85/140 (60%), Positives = 109/140 (77%)
Query: 1 MDRYQKVEKPKTETAISENELRITAQGRLRNYISYAISLLEEKGANEVVLKATGRAINKT 60
MD+YQ+VEKPK +T I+ENE+RIT+ GR RNYI+YA++LL+E +NEV+ KA GRAINK+
Sbjct: 1 MDKYQRVEKPKADTPIAENEIRITSMGRARNYITYAMALLQENKSNEVIFKAMGRAINKS 60
Query: 61 VMIAELLKRRVVGLHQNTSTGSIDITDVWXXXXXXXXXXXTTRHVSAITITLSRKELDSS 120
V I EL+KRR+ GLHQ TS GS DITD W TTRHVS ITITLS+++L++S
Sbjct: 61 VTIVELIKRRIPGLHQITSIGSTDITDTWEPTEEGLQTIETTRHVSMITITLSKEQLNTS 120
Query: 121 SLGYQPPVPTDQVKPLADYD 140
S+GYQ P+P + VKPLA+ D
Sbjct: 121 SVGYQCPIPIEMVKPLAEID 140
Score = 36 (17.7 bits), Expect = 2.9e-44, Sum P(2) = 2.9e-44
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 220 PPQGRG 225
PPQGRG
Sbjct: 281 PPQGRG 286
>TAIR|locus:2204400 [details] [associations]
symbol:AT1G76010 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR002775 Pfam:PF01918 EMBL:CP002684
GO:GO:0005829 GO:GO:0003676 EMBL:AF412102 EMBL:AY054208
EMBL:AF428441 EMBL:AY124847 IPI:IPI00531013 RefSeq:NP_565124.1
UniGene:At.24580 UniGene:At.67776 UniGene:At.75066 HSSP:P60849
ProteinModelPortal:Q93VA8 SMR:Q93VA8 STRING:Q93VA8 PRIDE:Q93VA8
EnsemblPlants:AT1G76010.1 GeneID:843932 KEGG:ath:AT1G76010
TAIR:At1g76010 HOGENOM:HOG000240806 InParanoid:Q93VA8 OMA:YDGPPQG
PhylomeDB:Q93VA8 ProtClustDB:CLSN2917456 Genevestigator:Q93VA8
Uniprot:Q93VA8
Length = 350
Score = 446 (162.1 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 88/144 (61%), Positives = 109/144 (75%)
Query: 1 MDRYQKVEKPKTETAISENELRITAQGRLRNYISYAISLLEEKGANEVVLKATGRAINKT 60
MD+YQ+V KPK +T I NE+RIT+QGR RNYI+YA++LL++KG+ EVV KA GRAINKT
Sbjct: 1 MDKYQRVVKPKADTPIDANEIRITSQGRARNYITYAMTLLQDKGSTEVVFKAMGRAINKT 60
Query: 61 VMIAELLKRRVVGLHQNTSTGSIDITDVWXXXXXXXXXXXTTRHVSAITITLSRKELDSS 120
V I EL+KRR+ LHQNTS GS DITD W TTRHVS ITITLS+ EL++S
Sbjct: 61 VTIVELIKRRIPDLHQNTSIGSTDITDTWEPTEEGLLPLETTRHVSMITITLSKIELNTS 120
Query: 121 SLGYQPPVPTDQVKPLADYD-DGR 143
S+GYQ P+P + VKP+ D D +GR
Sbjct: 121 SVGYQCPIPIELVKPMGDIDYEGR 144
Score = 36 (17.7 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 220 PPQGRG 225
PPQGRG
Sbjct: 271 PPQGRG 276
Score = 36 (17.7 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 220 PPQGRG 225
PPQGRG
Sbjct: 243 PPQGRG 248
>TAIR|locus:2077547 [details] [associations]
symbol:AT3G07030 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR002775 Pfam:PF01918
GO:GO:0005829 EMBL:CP002686 GO:GO:0003676 IPI:IPI00519674
RefSeq:NP_187359.2 UniGene:At.74527 ProteinModelPortal:F4JD88
SMR:F4JD88 PRIDE:F4JD88 EnsemblPlants:AT3G07030.1 GeneID:3768790
KEGG:ath:AT3G07030 OMA:ERRNDGY Uniprot:F4JD88
Length = 405
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 78/143 (54%), Positives = 99/143 (69%)
Query: 1 MDRYQKVEKPKTETAISENELRITAQGRLRNYISYAISLLEEKGANEVVLKATGRAINKT 60
MDRYQ+V KPK E+ I+ENE+RIT++G +RNYISYA SLL+EK ++VLKA G+AI+KT
Sbjct: 1 MDRYQRVAKPKPESPINENEIRITSKGLIRNYISYATSLLQEKSVKDIVLKAMGQAISKT 60
Query: 61 VMIAELLKRRVVGLHQNTSTGSIDITDVWXXXXXXXXXXXTTRHVSAITITLSRKELDSS 120
V I+E+LK ++ GLHQ+ + SI ITDVW TRHVS I+ITLS EL+
Sbjct: 61 VAISEILKNKIPGLHQDIAISSISITDVWEPTEEGLFPVELTRHVSMISITLSLSELNKD 120
Query: 121 SLGYQPPVPTDQVKPLADYDDGR 143
S GYQ P +DQ KP GR
Sbjct: 121 SPGYQAPAQSDQSKPQYQPQQGR 143
>UNIPROTKB|E2R227 [details] [associations]
symbol:LOC486757 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR002775 Pfam:PF01918 GO:GO:0003676
GeneTree:ENSGT00390000002564 KO:K14525 OMA:VTRMAYT
EMBL:AAEX03015333 RefSeq:XP_003433592.1 ProteinModelPortal:E2R227
Ensembl:ENSCAFT00000025376 GeneID:486757 KEGG:cfa:486757
NextBio:20860484 Uniprot:E2R227
Length = 163
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 48/134 (35%), Positives = 64/134 (47%)
Query: 20 ELRITAQGRLRNYISYAISLLEEKGANEVVLKATGRAINKTVMIAELLKRRVVGLHQNTS 79
E+R+ ++RN + A+ LE A VV +GRA K V AE++KRRV GLHQ T
Sbjct: 27 EMRVRDGSKIRNLLGLALGRLEGGSARHVVFSGSGRAAGKAVSCAEIVKRRVPGLHQLTK 86
Query: 80 TGSIDITDVWXXXXXXXXXXXTT--RHVSAITITLSRKELDSSSLGYQPPVPTDQVKPLA 137
+ D W T RHV A+ + LSR LD + GYQPP + P +
Sbjct: 87 LHFLQTEDSWVPISPDTGLDPLTVRRHVPAVWVLLSRDPLDPNECGYQPPGAPPGLGPTS 146
Query: 138 DYDDG-RALHGMRD 150
G R +RD
Sbjct: 147 SSSCGPRPRRRVRD 160
>UNIPROTKB|E2RC74 [details] [associations]
symbol:C11H9orf23 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR002775 Pfam:PF01918 GO:GO:0003676
GeneTree:ENSGT00390000002564 KO:K14525 OMA:MKVKDGS
EMBL:AAEX03007945 RefSeq:XP_538708.1 ProteinModelPortal:E2RC74
Ensembl:ENSCAFT00000003037 GeneID:481586 KEGG:cfa:481586 CTD:481586
NextBio:20856348 Uniprot:E2RC74
Length = 163
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 48/134 (35%), Positives = 64/134 (47%)
Query: 20 ELRITAQGRLRNYISYAISLLEEKGANEVVLKATGRAINKTVMIAELLKRRVVGLHQNTS 79
E+R+ ++RN + A+ LE A VV +GRA K V AE++KRRV GLHQ T
Sbjct: 27 EMRVRDGSKIRNLLGLALGRLEGGSARHVVFSGSGRAAGKAVSCAEIVKRRVPGLHQLTK 86
Query: 80 TGSIDITDVWXXXXXXXXXXXTT--RHVSAITITLSRKELDSSSLGYQPPVPTDQVKPLA 137
+ D W T RHV A+ + LSR LD + GYQPP + P +
Sbjct: 87 LRFLQTEDSWVPISPDTGLDPLTVRRHVPAVWVLLSRDPLDPNECGYQPPGAPPGLGPTS 146
Query: 138 DYDDG-RALHGMRD 150
G R +RD
Sbjct: 147 SSSCGPRPRRRVRD 160
>UNIPROTKB|F1SEB9 [details] [associations]
symbol:RPP25L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR002775 Pfam:PF01918 GO:GO:0003676
GeneTree:ENSGT00390000002564 KO:K14525 OMA:MKVKDGS EMBL:CU928717
RefSeq:XP_003130706.1 RefSeq:XP_003130707.1 RefSeq:XP_003130708.1
RefSeq:XP_003130709.1 UniGene:Ssc.2538 Ensembl:ENSSSCT00000012010
GeneID:100522095 KEGG:ssc:100522095 Uniprot:F1SEB9
Length = 163
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 48/134 (35%), Positives = 63/134 (47%)
Query: 20 ELRITAQGRLRNYISYAISLLEEKGANEVVLKATGRAINKTVMIAELLKRRVVGLHQNTS 79
E+R+ ++RN + A+ LE A VV +GRA K V AE++KRRV GLHQ T
Sbjct: 27 EMRVRDGSKIRNLLGLALGRLEGGSARHVVFSGSGRAAGKAVSCAEIVKRRVPGLHQLTK 86
Query: 80 TGSIDITDVWXXXXXXXXXXXTT--RHVSAITITLSRKELDSSSLGYQPPVPTDQVKPLA 137
+ D W T RHV A+ + LSR LD + GYQPP + P+
Sbjct: 87 LRFLQTEDSWVPTSPDTGLDPLTVRRHVPAVWVLLSRDPLDPNECGYQPPGAPPGLGPMP 146
Query: 138 DYDDG-RALHGMRD 150
G R RD
Sbjct: 147 SSSCGPRPRRRARD 160
>UNIPROTKB|Q8N5L8 [details] [associations]
symbol:RPP25L "Ribonuclease P protein subunit p25-like
protein" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002775 Pfam:PF01918 GO:GO:0005634 GO:GO:0003676
EMBL:CH471071 EMBL:AL160270 CTD:138716 eggNOG:NOG240130
HOGENOM:HOG000231665 HOVERGEN:HBG056729 KO:K14525 OMA:MKVKDGS
OrthoDB:EOG49ZXQR EMBL:BC032136 IPI:IPI00166873 RefSeq:NP_680544.1
RefSeq:NP_680545.1 UniGene:Hs.15961 ProteinModelPortal:Q8N5L8
SMR:Q8N5L8 PhosphoSite:Q8N5L8 DMDM:74751030 PeptideAtlas:Q8N5L8
PRIDE:Q8N5L8 DNASU:138716 Ensembl:ENST00000297613
Ensembl:ENST00000378959 GeneID:138716 KEGG:hsa:138716
UCSC:uc003zuu.3 GeneCards:GC09M034610 H-InvDB:HIX0007998
HGNC:HGNC:19909 HPA:HPA052187 neXtProt:NX_Q8N5L8
PharmGKB:PA134989644 InParanoid:Q8N5L8 PhylomeDB:Q8N5L8
GenomeRNAi:138716 NextBio:83819 Bgee:Q8N5L8 CleanEx:HS_C9orf23
Genevestigator:Q8N5L8 Uniprot:Q8N5L8
Length = 163
Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 43/110 (39%), Positives = 56/110 (50%)
Query: 20 ELRITAQGRLRNYISYAISLLEEKGANEVVLKATGRAINKTVMIAELLKRRVVGLHQNTS 79
E+R+ ++RN + A+ LE A VV +GRA K V AE++KRRV GLHQ T
Sbjct: 27 EMRVRDGSKIRNLLGLALGRLEGGSARHVVFSGSGRAAGKAVSCAEIVKRRVPGLHQLTK 86
Query: 80 TGSIDITDVWXXXXXXXXXXXTT--RHVSAITITLSRKELDSSSLGYQPP 127
+ D W T RHV A+ + LSR LD + GYQPP
Sbjct: 87 LRFLQTEDSWVPASPDTGLDPLTVRRHVPAVWVLLSRDPLDPNECGYQPP 136
>RGD|1306576 [details] [associations]
symbol:Rpp25l "ribonuclease P/MRP 25 subunit-like" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR002775 Pfam:PF01918 RGD:1306576
GO:GO:0003676 EMBL:CH473962 CTD:138716 eggNOG:NOG240130
GeneTree:ENSGT00390000002564 HOGENOM:HOG000231665
HOVERGEN:HBG056729 KO:K14525 OMA:MKVKDGS OrthoDB:EOG49ZXQR
EMBL:BC158601 IPI:IPI00561916 RefSeq:NP_001100118.1
UniGene:Rn.21605 Ensembl:ENSRNOT00000049032 GeneID:298002
KEGG:rno:298002 UCSC:RGD:1306576 NextBio:642945
Genevestigator:B0BMX6 Uniprot:B0BMX6
Length = 163
Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 43/110 (39%), Positives = 56/110 (50%)
Query: 20 ELRITAQGRLRNYISYAISLLEEKGANEVVLKATGRAINKTVMIAELLKRRVVGLHQNTS 79
E+R+ ++RN + A++ LE VV +GRA K V AE++KRRV GLHQ T
Sbjct: 27 EMRVRDGSKIRNLLGLALARLEGGSTRHVVFSGSGRAAGKAVSCAEIVKRRVPGLHQLTK 86
Query: 80 TGSIDITDVWXXXXXXXXXXXTT--RHVSAITITLSRKELDSSSLGYQPP 127
+ D W T RHV A+ + LSR LD S GYQPP
Sbjct: 87 LRFLQTEDSWVPTSPDTGLDPLTVRRHVPAVWVLLSRDPLDPSECGYQPP 136
>UNIPROTKB|E1BQE8 [details] [associations]
symbol:RPP25 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
InterPro:IPR002775 Pfam:PF01918 GO:GO:0003676
GeneTree:ENSGT00390000002564 OMA:AVHMRVK EMBL:AADN02051023
IPI:IPI00582710 Ensembl:ENSGALT00000040041 Uniprot:E1BQE8
Length = 164
Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 43/142 (30%), Positives = 75/142 (52%)
Query: 1 MDRYQKVEKPKTETAIS-EN------ELRITAQGRLRNYISYAISLLEEKGANEVVLKAT 53
M+ ++KV + E+ + N E+++ ++RN +S+A++ +E KG+ ++V
Sbjct: 1 MENFRKVRTSEEESPLPFPNLPPGVVEMKVKEGSKIRNLMSFAMAQMELKGSRQIVFSGC 60
Query: 54 GRAINKTVMIAELLKRRVVGLHQNTSTGSIDITDVWXXXX----XXXXXXXTTRHVSAIT 109
GRA+ KT+ E++KR++ GLHQ T + +VW ++V +I
Sbjct: 61 GRAVTKTITCVEIMKRKLGGLHQVTKVRYKTLLEVWENQDPLPGGAAQNLTVHKNVPSIC 120
Query: 110 ITLSRKELDSSSLGYQPPVPTD 131
I LSR LD + GYQPP P +
Sbjct: 121 ILLSRDPLDPNQTGYQPPEPRE 142
>MGI|MGI:1917211 [details] [associations]
symbol:Rpp25l "ribonuclease P/MRP 25 subunit-like"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR002775 Pfam:PF01918 MGI:MGI:1917211 GO:GO:0005634
GO:GO:0003676 CTD:138716 eggNOG:NOG240130
GeneTree:ENSGT00390000002564 HOGENOM:HOG000231665
HOVERGEN:HBG056729 KO:K14525 OMA:MKVKDGS OrthoDB:EOG49ZXQR
EMBL:AJ293897 EMBL:AK013222 EMBL:BC047068 IPI:IPI00319955
RefSeq:NP_081554.2 UniGene:Mm.425182 ProteinModelPortal:Q99JH1
PhosphoSite:Q99JH1 PaxDb:Q99JH1 PRIDE:Q99JH1
Ensembl:ENSMUST00000038434 GeneID:69961 KEGG:mmu:69961
InParanoid:Q99JH1 NextBio:330689 Bgee:Q99JH1
CleanEx:MM_2810432D09RIK Genevestigator:Q99JH1 Uniprot:Q99JH1
Length = 163
Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 43/110 (39%), Positives = 55/110 (50%)
Query: 20 ELRITAQGRLRNYISYAISLLEEKGANEVVLKATGRAINKTVMIAELLKRRVVGLHQNTS 79
E+R+ ++RN + A+ LE VV +GRA K V AE++KRRV GLHQ T
Sbjct: 27 EMRVRDGSKIRNLLGLALGRLEGGSTRHVVFSGSGRAAGKAVSCAEIVKRRVPGLHQLTK 86
Query: 80 TGSIDITDVWXXXXXXXXXXXTT--RHVSAITITLSRKELDSSSLGYQPP 127
+ D W T RHV A+ + LSR LD S GYQPP
Sbjct: 87 LRFLQTEDSWVPTSPDTGLDPLTVRRHVPAVWVLLSRDPLDPSECGYQPP 136
>UNIPROTKB|Q2KIR4 [details] [associations]
symbol:RPP25L "Ribonuclease P protein subunit p25-like
protein" species:9913 "Bos taurus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR002775 Pfam:PF01918 GO:GO:0005634 GO:GO:0003676
EMBL:BC112539 IPI:IPI00697463 RefSeq:NP_001039576.1
UniGene:Bt.20332 Ensembl:ENSBTAT00000021677 GeneID:512203
KEGG:bta:512203 CTD:138716 eggNOG:NOG240130
GeneTree:ENSGT00390000002564 HOGENOM:HOG000231665
HOVERGEN:HBG056729 InParanoid:Q2KIR4 KO:K14525 OMA:MKVKDGS
OrthoDB:EOG49ZXQR NextBio:20870285 Uniprot:Q2KIR4
Length = 163
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 45/115 (39%), Positives = 59/115 (51%)
Query: 20 ELRITAQGRLRNYISYAISLLEEKGANEVVLKATGRAINKTVMIAELLKRRVVGLHQNTS 79
E+R+ A ++RN + A+ LE A VV +GRA K V AE++KRRV GL+Q T
Sbjct: 27 EMRVRAGSKIRNLLGLALERLEGGSARHVVFSGSGRAAGKAVSCAEIVKRRVPGLYQLTK 86
Query: 80 TGSIDITDVWXXXXXXXXXX-XTTR-HVSAITITLSRKELDSSSLGYQPP-VPTD 131
+ D W T R HV A+ + LSR LD + GYQPP P D
Sbjct: 87 LRFLQTEDSWVPTSPDTGLDPLTVRSHVPAVWVLLSRDPLDPNEYGYQPPGAPPD 141
>DICTYBASE|DDB_G0281409 [details] [associations]
symbol:drpp25 "RNase MRP protein subunit"
species:44689 "Dictyostelium discoideum" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR002775 Pfam:PF01918 dictyBase:DDB_G0281409
GenomeReviews:CM000152_GR GO:GO:0003676 EMBL:AAFI02000041
eggNOG:NOG240130 RefSeq:XP_640657.1 ProteinModelPortal:Q54U04
EnsemblProtists:DDB0237623 GeneID:8623041 KEGG:ddi:DDB_G0281409
OMA:EANEVRI ProtClustDB:CLSZ2846784 Uniprot:Q54U04
Length = 369
Score = 189 (71.6 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 53/156 (33%), Positives = 83/156 (53%)
Query: 1 MDRYQKVEKPKTETAISE-NELRITA-QGRLRNYISYAISLLEEKGANEVVLKATG-RAI 57
MD+Y +V P+T +E NE+RI ++ + I Y ++L K + +++KA G + I
Sbjct: 1 MDKYYRV--PRTYDNDTEANEVRIGGVHSQVSSSIEYGLNLFN-KPHDSIIVKAIGSKMI 57
Query: 58 NKTVMIAELLKRRVVGLHQNTSTGSIDITDVWXXXXXXXXXXXTTRHVSAITITLSRKEL 117
+K + AE++K RV GLHQ T G+ +I + ++ + I ITLS+ L
Sbjct: 58 SKAIFTAEIIKLRVPGLHQITEIGTTEIVTQYMPKEEGLDKVEISKKSAFIKITLSKTPL 117
Query: 118 DSSSLGYQPPVPTD--QVKPLA--DYDDGRALHGMR 149
D+++ GYQPP+P Q KP DY R G R
Sbjct: 118 DTTNPGYQPPLPESETQKKPTRPRDYSPRRTRGGFR 153
>UNIPROTKB|E1C3A2 [details] [associations]
symbol:CZH9orf23 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR002775 Pfam:PF01918 GO:GO:0003676
GeneTree:ENSGT00390000002564 OMA:MKVKDGS EMBL:AADN02068971
IPI:IPI00577474 Ensembl:ENSGALT00000009367 Uniprot:E1C3A2
Length = 170
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 41/136 (30%), Positives = 68/136 (50%)
Query: 1 MDRYQK---VEKPK----TETAISENELRITAQGRLRNYISYAISLLEEKGANEVVLKAT 53
M+ Y+K VEKP T+ E+++ ++RN + YAI +E +++ +
Sbjct: 1 MENYKKTKIVEKPCPLPFTDLPPDIIEMKVKDGSKIRNLMGYAIGKMELDSVRQILFTGS 60
Query: 54 GRAINKTVMIAELLKRRVVGLHQNTSTGSIDITDVWXXXXXXXXXXXTT--RHVSAITIT 111
G+A++KT+ E++KRR+ LHQ T I ++W T R++ AI +
Sbjct: 61 GKAVSKTITCVEIMKRRLKELHQITKVLFKQIEEIWEPIVPEAGLDALTVKRNIPAICVL 120
Query: 112 LSRKELDSSSLGYQPP 127
LS+ LD GYQ P
Sbjct: 121 LSKDALDPQEPGYQAP 136
>MGI|MGI:2143151 [details] [associations]
symbol:Rpp25 "ribonuclease P/MRP 25 subunit" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004526 "ribonuclease P activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR002775 Pfam:PF01918 MGI:MGI:2143151 GO:GO:0005634
GO:GO:0003723 GO:GO:0008033 GO:GO:0004526
GeneTree:ENSGT00390000002564 HOGENOM:HOG000231665
HOVERGEN:HBG056729 KO:K14525 OrthoDB:EOG49ZXQR CTD:54913
eggNOG:NOG247262 OMA:AVHMRVK EMBL:AK082822 EMBL:BC016085
EMBL:BC083064 IPI:IPI00128066 RefSeq:NP_598743.1 UniGene:Mm.274421
ProteinModelPortal:Q91WE3 STRING:Q91WE3 PhosphoSite:Q91WE3
PRIDE:Q91WE3 Ensembl:ENSMUST00000080514 GeneID:102614
KEGG:mmu:102614 UCSC:uc009puy.1 InParanoid:Q91WE3 NextBio:355562
Bgee:Q91WE3 CleanEx:MM_RPP25 Genevestigator:Q91WE3
GermOnline:ENSMUSG00000062309 Uniprot:Q91WE3
Length = 199
Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 38/128 (29%), Positives = 59/128 (46%)
Query: 10 PKTETAISENELRITAQGRLRNYISYAISLLEEKGANEVVLKATGRAINKTVMIAELLKR 69
P + A +R+ ++RN +++A + + + +V GRA KTV AE+LKR
Sbjct: 27 PFADLAPGAVHMRVKEGSKIRNLLAFATASMAQPATRAIVFSGCGRATTKTVTCAEILKR 86
Query: 70 RVVGLHQNTSTGSIDITDVWXXX----------XXXXXXXXTTRHVSAITITLSRKELDS 119
R+ GLHQ T + +VW ++V ++ I LS+ LD
Sbjct: 87 RLAGLHQVTRLRYRSVREVWQSLPPGPTPGQTPSDPAASLSVLKNVPSLAILLSKDALDP 146
Query: 120 SSLGYQPP 127
LGYQPP
Sbjct: 147 RQLGYQPP 154
>RGD|1305290 [details] [associations]
symbol:Rpp25 "ribonuclease P/MRP 25 subunit" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004526 "ribonuclease P activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0005813 "centrosome" evidence=IEA;ISO]
[GO:0008033 "tRNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR002775 Pfam:PF01918 RGD:1305290
GO:GO:0005634 GO:GO:0003723 GO:GO:0008033 GO:GO:0004526
GeneTree:ENSGT00390000002564 HOGENOM:HOG000231665
HOVERGEN:HBG056729 KO:K14525 OrthoDB:EOG49ZXQR CTD:54913
eggNOG:NOG247262 OMA:AVHMRVK EMBL:BC087592 IPI:IPI00194381
RefSeq:NP_001012124.1 UniGene:Rn.13924 ProteinModelPortal:Q5PPN2
STRING:Q5PPN2 PhosphoSite:Q5PPN2 Ensembl:ENSRNOT00000025410
GeneID:315705 KEGG:rno:315705 UCSC:RGD:1305290 InParanoid:Q5PPN2
NextBio:669696 Genevestigator:Q5PPN2 GermOnline:ENSRNOG00000018812
Uniprot:Q5PPN2
Length = 199
Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 38/128 (29%), Positives = 59/128 (46%)
Query: 10 PKTETAISENELRITAQGRLRNYISYAISLLEEKGANEVVLKATGRAINKTVMIAELLKR 69
P + A +R+ ++RN +++A + + + +V GRA KTV AE+LKR
Sbjct: 27 PFADLAPGAVHMRVKEGSKIRNLLAFATASMAQPATRAIVFSGCGRATTKTVTCAEILKR 86
Query: 70 RVVGLHQNTSTGSIDITDVWXXX----------XXXXXXXXTTRHVSAITITLSRKELDS 119
R+ GLHQ T + +VW ++V ++ I LS+ LD
Sbjct: 87 RLAGLHQVTRLRYRSVREVWQSLPPGPTPGQTPSDPAASLSVLKNVPSLAILLSKDALDP 146
Query: 120 SSLGYQPP 127
LGYQPP
Sbjct: 147 RQLGYQPP 154
>UNIPROTKB|F1SJ50 [details] [associations]
symbol:RPP25 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005813 "centrosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002775
Pfam:PF01918 GO:GO:0003676 GeneTree:ENSGT00390000002564 OMA:AVHMRVK
EMBL:CU407105 Ensembl:ENSSSCT00000002114 Uniprot:F1SJ50
Length = 199
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 37/119 (31%), Positives = 57/119 (47%)
Query: 21 LRITAQGRLRNYISYAISLLEEKGANEVVLKATGRAINKTVMIAELLKRRVVGLHQNTST 80
+R+ ++RN +++A + + + +V GRA KTV AE+LKRR+VGLHQ T
Sbjct: 38 MRVKEGSKIRNLLAFATASMAQPATRAIVFSGCGRATTKTVTCAEILKRRLVGLHQVTRL 97
Query: 81 GSIDITDVWXXX----------XXXXXXXXTTRHVSAITITLSRKELDSSSLGYQPPVP 129
+ +VW ++V ++ I LS+ LD GYQPP P
Sbjct: 98 RYRSVREVWQSLPPEPTPDQKPDEPAASLTVLKNVPSLAILLSKDALDPRQPGYQPPSP 156
>UNIPROTKB|Q9BUL9 [details] [associations]
symbol:RPP25 "Ribonuclease P protein subunit p25"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008033 "tRNA processing" evidence=IEA] [GO:0004526
"ribonuclease P activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR002775 Pfam:PF01918 GO:GO:0005739 GO:GO:0005634
GO:GO:0005813 GO:GO:0003723 EMBL:CH471136 GO:GO:0008033
GO:GO:0004526 HOGENOM:HOG000231665 HOVERGEN:HBG056729 KO:K14525
OrthoDB:EOG49ZXQR EMBL:AY034074 EMBL:AK000381 EMBL:BC002497
EMBL:BC007270 IPI:IPI00306056 RefSeq:NP_060263.2 UniGene:Hs.8562
ProteinModelPortal:Q9BUL9 IntAct:Q9BUL9 STRING:Q9BUL9
PhosphoSite:Q9BUL9 DMDM:74733233 PaxDb:Q9BUL9 PeptideAtlas:Q9BUL9
PRIDE:Q9BUL9 DNASU:54913 Ensembl:ENST00000322177
Ensembl:ENST00000499788 GeneID:54913 KEGG:hsa:54913 UCSC:uc002azj.1
CTD:54913 GeneCards:GC15M075247 HGNC:HGNC:30361 HPA:HPA046900
neXtProt:NX_Q9BUL9 PharmGKB:PA134990737 eggNOG:NOG247262
InParanoid:Q9BUL9 OMA:AVHMRVK PhylomeDB:Q9BUL9 GenomeRNAi:54913
NextBio:57966 Bgee:Q9BUL9 CleanEx:HS_RPP25 Genevestigator:Q9BUL9
GermOnline:ENSG00000178718 Uniprot:Q9BUL9
Length = 199
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 39/130 (30%), Positives = 59/130 (45%)
Query: 10 PKTETAISENELRITAQGRLRNYISYAISLLEEKGANEVVLKATGRAINKTVMIAELLKR 69
P + A +R+ ++RN +++A + + + +V GRA KTV AE+LKR
Sbjct: 27 PFADLAPGAVHMRVKEGSKIRNLMAFATASMAQPATRAIVFSGCGRATTKTVTCAEILKR 86
Query: 70 RVVGLHQNTSTGSIDITDVWXXXXXXXXXXXTT----------RHVSAITITLSRKELDS 119
R+ GLHQ T + +VW T ++V + I LS+ LD
Sbjct: 87 RLAGLHQVTRLRYRSVREVWQSLPPGPTQGQTPGEPAASLSVLKNVPGLAILLSKDALDP 146
Query: 120 SSLGYQPPVP 129
GYQPP P
Sbjct: 147 RQPGYQPPNP 156
>UNIPROTKB|E1BK83 [details] [associations]
symbol:RPP25 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005813 "centrosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002775
Pfam:PF01918 GO:GO:0003676 GeneTree:ENSGT00390000002564 OMA:AVHMRVK
EMBL:DAAA02052494 IPI:IPI00695922 Ensembl:ENSBTAT00000028907
Uniprot:E1BK83
Length = 199
Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 37/130 (28%), Positives = 59/130 (45%)
Query: 10 PKTETAISENELRITAQGRLRNYISYAISLLEEKGANEVVLKATGRAINKTVMIAELLKR 69
P + A +R+ ++RN +++A + + + +V GRA KTV AE+LKR
Sbjct: 27 PFADLAPGAVHMRVKEGSKIRNLLAFATASMAQPATRAIVFSGCGRATTKTVTCAEILKR 86
Query: 70 RVVGLHQNTSTGSIDITDVWXXX----------XXXXXXXXTTRHVSAITITLSRKELDS 119
R+ GLHQ T + ++W ++V ++ I LS+ LD
Sbjct: 87 RLAGLHQVTRLRYQSVRELWQSLPPEPTPGQKPGEPAASLSVLKNVPSLAILLSKDALDP 146
Query: 120 SSLGYQPPVP 129
GYQPP P
Sbjct: 147 RQPGYQPPNP 156
>ZFIN|ZDB-GENE-040718-275 [details] [associations]
symbol:rpp25l "ribonuclease P/MRP 25 subunit-like"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR002775
Pfam:PF01918 ZFIN:ZDB-GENE-040718-275 GO:GO:0003676 CTD:138716
HOVERGEN:HBG056729 KO:K14525 EMBL:BC076268 IPI:IPI00482110
RefSeq:NP_001002540.1 UniGene:Dr.83100 ProteinModelPortal:Q6DGS1
STRING:Q6DGS1 GeneID:436813 KEGG:dre:436813 InParanoid:Q6DGS1
NextBio:20831245 ArrayExpress:Q6DGS1 Uniprot:Q6DGS1
Length = 224
Score = 132 (51.5 bits), Expect = 6.1e-10, Sum P(2) = 6.1e-10
Identities = 34/109 (31%), Positives = 52/109 (47%)
Query: 47 EVVLKATGRAINKTVMIAELLKRRVVGLHQNTSTGSIDITDVWXXXXXXXXXXXTT--RH 104
++V G+++ K + E++KRR+ GLHQ T + DVW T R+
Sbjct: 73 QIVFTGVGQSVAKAITCVEIMKRRIHGLHQLTKLAYRTLQDVWEPLEPGAGLDSLTVSRN 132
Query: 105 VSAITITLSRKELDSSSLGYQPPVPTDQ--VKPLADYDDGRALHGMRDK 151
V +I + LSR LD + GYQ P D ++ L + + HG R K
Sbjct: 133 VPSIWVLLSRDSLDKNQPGYQAPGSFDALWIQALKE-EAATPRHGQRRK 180
Score = 49 (22.3 bits), Expect = 6.1e-10, Sum P(2) = 6.1e-10
Identities = 9/26 (34%), Positives = 18/26 (69%)
Query: 20 ELRITAQGRLRNYISYAISLLEEKGA 45
E+R+ ++RN + +A+S +EE+ A
Sbjct: 27 EVRVKDGSKIRNLMRFALSRMEEETA 52
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.133 0.392 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 273 198 0.00083 111 3 11 22 0.36 33
31 0.45 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 19
No. of states in DFA: 600 (64 KB)
Total size of DFA: 162 KB (2096 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.79u 0.08s 13.87t Elapsed: 00:00:00
Total cpu time: 13.79u 0.08s 13.87t Elapsed: 00:00:00
Start: Sat May 11 08:04:43 2013 End: Sat May 11 08:04:43 2013