Query 024040
Match_columns 273
No_of_seqs 192 out of 1180
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 17:09:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024040.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024040hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vc3_A Beta-cyanoalnine syntha 100.0 4.9E-64 1.7E-68 451.9 27.7 267 6-272 24-290 (344)
2 4aec_A Cysteine synthase, mito 100.0 6.8E-63 2.3E-67 453.2 28.3 268 5-272 111-378 (430)
3 3tbh_A O-acetyl serine sulfhyd 100.0 1.2E-62 4E-67 441.5 29.2 268 4-272 8-275 (334)
4 1z7w_A Cysteine synthase; tran 100.0 5.8E-62 2E-66 435.3 28.5 267 6-272 4-270 (322)
5 3dwg_A Cysteine synthase B; su 100.0 4.3E-61 1.5E-65 430.0 27.0 259 5-272 3-268 (325)
6 2q3b_A Cysteine synthase A; py 100.0 1.1E-60 3.8E-65 425.5 29.2 267 5-272 4-270 (313)
7 1y7l_A O-acetylserine sulfhydr 100.0 1.2E-60 4.2E-65 425.8 25.3 263 7-272 3-273 (316)
8 1ve1_A O-acetylserine sulfhydr 100.0 4.1E-60 1.4E-64 420.2 27.8 261 11-272 3-264 (304)
9 2v03_A Cysteine synthase B; py 100.0 6.3E-60 2.1E-64 418.8 28.8 255 9-272 2-256 (303)
10 2egu_A Cysteine synthase; O-ac 100.0 1.6E-60 5.6E-65 423.5 24.1 264 7-272 4-267 (308)
11 2pqm_A Cysteine synthase; OASS 100.0 3.1E-60 1.1E-64 427.4 26.1 265 6-272 12-281 (343)
12 1o58_A O-acetylserine sulfhydr 100.0 4E-59 1.4E-63 413.7 24.7 258 7-272 10-268 (303)
13 1jbq_A B, cystathionine beta-s 100.0 3.3E-57 1.1E-61 417.4 28.0 266 6-272 97-372 (435)
14 3pc3_A CG1753, isoform A; CBS, 100.0 3.1E-57 1.1E-61 429.3 27.0 266 6-272 49-324 (527)
15 3l6b_A Serine racemase; pyrido 100.0 4.6E-58 1.6E-62 413.6 17.8 263 4-272 12-286 (346)
16 2gn0_A Threonine dehydratase c 100.0 7.5E-58 2.6E-62 411.8 15.3 259 4-272 27-298 (342)
17 4h27_A L-serine dehydratase/L- 100.0 4.2E-56 1.4E-60 403.2 22.6 258 7-272 36-306 (364)
18 1v71_A Serine racemase, hypoth 100.0 2E-57 6.8E-62 406.2 13.6 260 4-273 13-285 (323)
19 1ve5_A Threonine deaminase; ri 100.0 8E-57 2.7E-61 400.3 16.8 258 4-272 7-280 (311)
20 1p5j_A L-serine dehydratase; l 100.0 3.8E-56 1.3E-60 404.4 21.2 259 6-272 35-306 (372)
21 2rkb_A Serine dehydratase-like 100.0 2.3E-55 8E-60 392.0 21.9 251 13-272 3-266 (318)
22 1tdj_A Biosynthetic threonine 100.0 1.8E-55 6E-60 411.4 18.2 254 10-272 24-289 (514)
23 3aey_A Threonine synthase; PLP 100.0 7.7E-55 2.6E-59 393.5 21.3 255 8-272 19-290 (351)
24 2d1f_A Threonine synthase; ami 100.0 7.3E-55 2.5E-59 394.8 20.6 254 9-272 30-299 (360)
25 2zsj_A Threonine synthase; PLP 100.0 1.6E-54 5.3E-59 391.7 20.6 255 8-272 21-292 (352)
26 3ss7_X D-serine dehydratase; t 100.0 6.2E-54 2.1E-58 397.6 22.8 258 13-273 74-388 (442)
27 3iau_A Threonine deaminase; py 100.0 4.3E-55 1.5E-59 397.0 14.7 254 10-272 53-318 (366)
28 4d9b_A D-cysteine desulfhydras 100.0 6.6E-55 2.3E-59 392.6 15.1 263 4-272 19-301 (342)
29 1f2d_A 1-aminocyclopropane-1-c 100.0 8.2E-55 2.8E-59 392.0 13.5 261 6-272 4-295 (341)
30 1j0a_A 1-aminocyclopropane-1-c 100.0 3.1E-54 1.1E-58 385.8 16.1 260 5-271 9-281 (325)
31 4d9i_A Diaminopropionate ammon 100.0 1.4E-52 4.9E-57 384.4 18.6 257 13-272 40-340 (398)
32 1wkv_A Cysteine synthase; homo 100.0 6E-51 2.1E-55 371.2 23.9 243 15-272 94-342 (389)
33 1tzj_A ACC deaminase, 1-aminoc 100.0 1.6E-52 5.4E-57 376.7 12.5 259 5-272 3-294 (338)
34 1x1q_A Tryptophan synthase bet 100.0 2.6E-49 8.9E-54 364.7 18.7 256 13-272 72-375 (418)
35 1qop_B Tryptophan synthase bet 100.0 6.4E-49 2.2E-53 360.1 19.2 257 10-272 47-350 (396)
36 1v8z_A Tryptophan synthase bet 100.0 1.8E-48 6.2E-53 356.3 21.6 258 9-272 41-346 (388)
37 1e5x_A Threonine synthase; thr 100.0 2E-48 6.8E-53 364.3 18.6 252 11-272 124-405 (486)
38 2o2e_A Tryptophan synthase bet 100.0 2E-47 6.8E-52 352.1 20.9 256 12-272 75-377 (422)
39 1vb3_A Threonine synthase; PLP 100.0 8.3E-42 2.8E-46 315.3 17.0 238 15-272 81-354 (428)
40 1kl7_A Threonine synthase; thr 100.0 1.4E-38 4.9E-43 298.1 19.7 246 14-272 93-423 (514)
41 4f4f_A Threonine synthase; str 100.0 2.7E-38 9.3E-43 292.9 19.5 237 18-272 94-392 (468)
42 3v7n_A Threonine synthase; ssg 100.0 1.4E-36 4.8E-41 281.6 18.6 242 18-272 103-411 (487)
43 3fwz_A Inner membrane protein 93.6 0.89 3E-05 34.0 10.7 96 71-208 9-105 (140)
44 1vp8_A Hypothetical protein AF 92.4 1.4 4.6E-05 35.4 10.1 75 42-122 22-105 (201)
45 3s2e_A Zinc-containing alcohol 91.8 1.8 6.3E-05 37.4 11.6 62 57-122 156-217 (340)
46 3jyn_A Quinone oxidoreductase; 91.2 1.6 5.6E-05 37.5 10.5 59 61-122 134-192 (325)
47 1kol_A Formaldehyde dehydrogen 91.0 2.5 8.5E-05 37.5 11.8 58 59-119 177-234 (398)
48 4a2c_A Galactitol-1-phosphate 90.8 2.7 9.2E-05 36.3 11.7 63 59-124 152-214 (346)
49 4b7c_A Probable oxidoreductase 90.7 2.5 8.4E-05 36.5 11.2 58 61-121 143-201 (336)
50 3qwb_A Probable quinone oxidor 90.7 2.4 8.1E-05 36.6 11.1 59 61-122 142-200 (334)
51 4dup_A Quinone oxidoreductase; 90.4 2.3 7.9E-05 37.1 10.9 59 61-122 161-219 (353)
52 3uog_A Alcohol dehydrogenase; 90.0 2.8 9.4E-05 36.7 11.1 60 58-121 179-239 (363)
53 3gaz_A Alcohol dehydrogenase s 89.4 3.3 0.00011 35.9 11.0 54 61-118 144-197 (343)
54 4eye_A Probable oxidoreductase 89.1 2.1 7.2E-05 37.1 9.5 61 58-121 149-210 (342)
55 4ej6_A Putative zinc-binding d 88.8 2.7 9.2E-05 37.0 10.0 61 58-121 173-233 (370)
56 3tqh_A Quinone oxidoreductase; 88.7 2.9 9.9E-05 35.8 10.0 60 58-121 143-202 (321)
57 3gms_A Putative NADPH:quinone 88.5 2.4 8.1E-05 36.7 9.4 60 60-122 137-196 (340)
58 3fpc_A NADP-dependent alcohol 88.4 2.2 7.7E-05 37.1 9.2 59 58-120 157-216 (352)
59 3gqv_A Enoyl reductase; medium 88.3 1.8 6.1E-05 38.1 8.5 52 66-121 163-214 (371)
60 2c0c_A Zinc binding alcohol de 88.3 4.3 0.00015 35.5 11.0 58 61-121 157-214 (362)
61 2eih_A Alcohol dehydrogenase; 86.9 5.4 0.00018 34.4 10.7 59 58-119 156-215 (343)
62 2j8z_A Quinone oxidoreductase; 86.6 6 0.0002 34.4 10.9 57 61-120 156-212 (354)
63 1h2b_A Alcohol dehydrogenase; 86.6 6.8 0.00023 34.1 11.3 60 58-121 175-237 (359)
64 3pi7_A NADH oxidoreductase; gr 86.4 3.2 0.00011 36.0 9.0 51 69-122 166-216 (349)
65 1v3u_A Leukotriene B4 12- hydr 86.4 7.8 0.00027 33.2 11.4 57 61-120 139-195 (333)
66 1f8f_A Benzyl alcohol dehydrog 86.3 5.7 0.00019 34.7 10.6 59 61-122 184-242 (371)
67 1yb5_A Quinone oxidoreductase; 85.9 9.5 0.00032 33.1 11.8 60 58-120 160-220 (351)
68 3two_A Mannitol dehydrogenase; 85.8 2.9 9.9E-05 36.3 8.4 58 59-120 168-225 (348)
69 1jvb_A NAD(H)-dependent alcoho 85.7 7.4 0.00025 33.6 11.0 60 59-121 162-222 (347)
70 2dph_A Formaldehyde dismutase; 85.3 8.7 0.0003 33.9 11.4 58 58-119 176-234 (398)
71 3ip1_A Alcohol dehydrogenase, 85.2 4.2 0.00014 36.2 9.3 57 63-122 209-265 (404)
72 1gu7_A Enoyl-[acyl-carrier-pro 85.0 4.6 0.00016 35.2 9.3 63 58-120 156-221 (364)
73 3goh_A Alcohol dehydrogenase, 84.9 1.9 6.4E-05 36.9 6.6 59 57-120 132-190 (315)
74 3iup_A Putative NADPH:quinone 84.8 4.7 0.00016 35.5 9.3 53 67-122 170-223 (379)
75 1qor_A Quinone oxidoreductase; 84.7 8.3 0.00028 32.9 10.7 60 58-120 130-190 (327)
76 1zsy_A Mitochondrial 2-enoyl t 84.7 5.8 0.0002 34.5 9.8 60 61-120 161-221 (357)
77 1wly_A CAAR, 2-haloacrylate re 84.7 8.2 0.00028 33.0 10.7 60 58-120 135-195 (333)
78 2hcy_A Alcohol dehydrogenase 1 84.6 11 0.00037 32.5 11.5 60 58-120 160-219 (347)
79 1vj0_A Alcohol dehydrogenase, 84.5 5.2 0.00018 35.2 9.5 59 58-120 185-245 (380)
80 3krt_A Crotonyl COA reductase; 84.4 2.8 9.6E-05 38.0 7.9 57 63-122 224-280 (456)
81 1pqw_A Polyketide synthase; ro 84.4 11 0.00036 29.4 10.5 55 61-118 32-86 (198)
82 1t57_A Conserved protein MTH16 84.0 5.2 0.00018 32.1 8.1 74 42-122 30-112 (206)
83 4a0s_A Octenoyl-COA reductase/ 83.9 4 0.00014 36.8 8.7 55 63-120 216-270 (447)
84 1e3j_A NADP(H)-dependent ketos 83.9 8.4 0.00029 33.3 10.5 58 59-120 160-217 (352)
85 2zb4_A Prostaglandin reductase 83.8 11 0.00038 32.5 11.3 57 61-120 152-212 (357)
86 1rjw_A ADH-HT, alcohol dehydro 82.6 10 0.00035 32.6 10.5 53 64-120 161-213 (339)
87 3l9w_A Glutathione-regulated p 82.4 9.3 0.00032 34.2 10.4 49 72-123 7-55 (413)
88 2d8a_A PH0655, probable L-thre 82.4 9.8 0.00033 32.8 10.3 58 58-120 159-217 (348)
89 3fbg_A Putative arginate lyase 82.2 13 0.00045 32.0 11.1 52 67-121 150-201 (346)
90 2j3h_A NADP-dependent oxidored 82.1 12 0.00042 32.0 10.8 57 61-120 149-206 (345)
91 3uko_A Alcohol dehydrogenase c 81.9 7.9 0.00027 33.9 9.6 56 61-120 187-243 (378)
92 2vn8_A Reticulon-4-interacting 81.1 9.6 0.00033 33.3 9.8 54 65-122 181-234 (375)
93 1p0f_A NADP-dependent alcohol 79.5 9.2 0.00031 33.4 9.2 56 61-120 185-241 (373)
94 1pl8_A Human sorbitol dehydrog 79.4 8.2 0.00028 33.5 8.8 58 59-120 163-221 (356)
95 1xa0_A Putative NADPH dependen 79.3 4.4 0.00015 34.7 6.9 57 61-120 142-199 (328)
96 4eez_A Alcohol dehydrogenase 1 78.9 18 0.0006 31.0 10.7 61 59-123 155-216 (348)
97 2b5w_A Glucose dehydrogenase; 78.9 7.6 0.00026 33.7 8.4 50 69-119 174-226 (357)
98 2cdc_A Glucose dehydrogenase g 78.8 8.9 0.0003 33.4 8.8 51 68-119 181-231 (366)
99 1iz0_A Quinone oxidoreductase; 78.2 6.6 0.00022 33.2 7.6 54 62-119 121-174 (302)
100 1piw_A Hypothetical zinc-type 78.2 6.8 0.00023 34.1 7.8 59 58-120 170-228 (360)
101 3jv7_A ADH-A; dehydrogenase, n 78.0 16 0.00054 31.4 10.1 54 64-121 168-222 (345)
102 1c1d_A L-phenylalanine dehydro 77.8 8.9 0.0003 33.7 8.4 65 50-118 155-221 (355)
103 1e3i_A Alcohol dehydrogenase, 77.2 13 0.00044 32.4 9.5 56 61-120 189-245 (376)
104 1tt7_A YHFP; alcohol dehydroge 77.2 5.3 0.00018 34.2 6.8 57 61-120 143-200 (330)
105 1uuf_A YAHK, zinc-type alcohol 77.1 8.3 0.00028 33.7 8.1 58 59-120 186-243 (369)
106 1cdo_A Alcohol dehydrogenase; 76.5 15 0.00052 31.9 9.7 56 61-120 186-242 (374)
107 4gkb_A 3-oxoacyl-[acyl-carrier 76.0 16 0.00054 30.4 9.2 72 69-140 8-80 (258)
108 2jhf_A Alcohol dehydrogenase E 75.9 15 0.00052 31.9 9.5 56 61-120 185-241 (374)
109 2q2v_A Beta-D-hydroxybutyrate 75.8 21 0.00073 29.0 9.9 55 69-124 5-59 (255)
110 3nx4_A Putative oxidoreductase 75.4 6.5 0.00022 33.5 6.8 56 62-120 140-196 (324)
111 3uf0_A Short-chain dehydrogena 74.3 20 0.00067 29.7 9.4 56 69-124 32-87 (273)
112 3tpf_A Otcase, ornithine carba 73.8 18 0.00062 31.1 9.1 62 61-122 139-206 (307)
113 3h7a_A Short chain dehydrogena 73.3 31 0.0011 28.0 10.3 72 69-140 8-81 (252)
114 2fzw_A Alcohol dehydrogenase c 73.3 15 0.00052 31.9 8.8 56 61-120 184-240 (373)
115 4ekn_B Aspartate carbamoyltran 73.0 6.9 0.00024 33.7 6.2 51 72-122 154-210 (306)
116 3s8m_A Enoyl-ACP reductase; ro 72.8 27 0.00091 31.5 10.3 99 41-141 35-149 (422)
117 3llv_A Exopolyphosphatase-rela 71.3 20 0.00067 26.1 7.9 48 72-122 9-56 (141)
118 2cf5_A Atccad5, CAD, cinnamyl 70.7 14 0.00047 32.0 7.9 58 59-120 171-230 (357)
119 4fs3_A Enoyl-[acyl-carrier-pro 69.9 44 0.0015 27.3 10.5 33 69-101 7-41 (256)
120 3ek2_A Enoyl-(acyl-carrier-pro 69.3 28 0.00097 28.2 9.2 72 69-141 15-90 (271)
121 3e03_A Short chain dehydrogena 68.7 48 0.0016 27.2 10.8 72 69-140 7-87 (274)
122 3kvo_A Hydroxysteroid dehydrog 68.2 50 0.0017 28.5 10.9 72 69-140 46-126 (346)
123 3csu_A Protein (aspartate carb 67.5 9.9 0.00034 32.8 6.0 59 62-122 149-213 (310)
124 2h6e_A ADH-4, D-arabinose 1-de 67.5 19 0.00063 31.0 8.0 52 64-120 168-221 (344)
125 4dvj_A Putative zinc-dependent 67.1 22 0.00077 30.8 8.5 58 61-121 160-223 (363)
126 3c85_A Putative glutathione-re 67.1 15 0.00051 28.2 6.7 48 72-122 42-90 (183)
127 3gg9_A D-3-phosphoglycerate de 66.7 36 0.0012 29.7 9.7 105 71-198 162-268 (352)
128 1pvv_A Otcase, ornithine carba 66.6 28 0.00096 30.0 8.8 59 62-122 150-215 (315)
129 1ml4_A Aspartate transcarbamoy 66.6 7.7 0.00026 33.4 5.1 60 61-122 149-213 (308)
130 1yqd_A Sinapyl alcohol dehydro 66.6 22 0.00074 30.9 8.3 53 64-120 183-237 (366)
131 3kkj_A Amine oxidase, flavin-c 66.5 6.4 0.00022 31.1 4.5 28 72-99 5-32 (336)
132 1duv_G Octase-1, ornithine tra 66.4 23 0.00078 30.8 8.2 51 72-122 158-216 (333)
133 2ew8_A (S)-1-phenylethanol deh 66.0 45 0.0015 26.8 9.7 54 69-123 8-61 (249)
134 1vlv_A Otcase, ornithine carba 65.9 25 0.00085 30.5 8.3 59 62-122 162-228 (325)
135 4fn4_A Short chain dehydrogena 65.6 28 0.00097 28.8 8.4 73 69-141 8-82 (254)
136 3nrc_A Enoyl-[acyl-carrier-pro 65.3 35 0.0012 28.1 9.1 72 69-141 27-101 (280)
137 2i6u_A Otcase, ornithine carba 65.2 24 0.00083 30.3 8.0 59 62-122 143-209 (307)
138 1x13_A NAD(P) transhydrogenase 65.1 12 0.00042 33.3 6.4 49 68-120 172-220 (401)
139 1dxh_A Ornithine carbamoyltran 65.1 24 0.00082 30.7 8.0 51 72-122 158-216 (335)
140 3ezl_A Acetoacetyl-COA reducta 64.9 38 0.0013 27.3 9.1 73 69-141 14-89 (256)
141 3r1i_A Short-chain type dehydr 64.2 39 0.0013 27.9 9.1 72 69-140 33-106 (276)
142 4imr_A 3-oxoacyl-(acyl-carrier 64.1 46 0.0016 27.4 9.6 55 69-123 34-89 (275)
143 3qiv_A Short-chain dehydrogena 63.7 42 0.0014 27.0 9.1 71 69-139 10-82 (253)
144 1sny_A Sniffer CG10964-PA; alp 63.1 28 0.00096 28.2 8.0 54 69-122 22-78 (267)
145 1l7d_A Nicotinamide nucleotide 63.0 13 0.00046 32.7 6.2 49 67-119 171-219 (384)
146 3zu3_A Putative reductase YPO4 62.8 84 0.0029 28.0 13.0 100 40-141 20-135 (405)
147 2ae2_A Protein (tropinone redu 62.6 45 0.0015 27.0 9.2 55 69-123 10-65 (260)
148 1g0o_A Trihydroxynaphthalene r 62.3 37 0.0013 28.0 8.7 55 69-123 30-86 (283)
149 3afn_B Carbonyl reductase; alp 62.3 58 0.002 26.0 10.0 55 69-123 8-64 (258)
150 3rkr_A Short chain oxidoreduct 61.7 41 0.0014 27.3 8.8 56 69-124 30-86 (262)
151 3d4o_A Dipicolinate synthase s 61.7 64 0.0022 26.9 10.1 64 52-119 138-202 (293)
152 3awd_A GOX2181, putative polyo 61.6 38 0.0013 27.2 8.5 55 69-123 14-69 (260)
153 3qk7_A Transcriptional regulat 60.8 68 0.0023 26.2 17.1 43 165-210 179-225 (294)
154 3a28_C L-2.3-butanediol dehydr 60.7 36 0.0012 27.6 8.2 54 70-123 4-60 (258)
155 2r6j_A Eugenol synthase 1; phe 60.6 32 0.0011 28.7 8.1 53 70-122 13-66 (318)
156 4a27_A Synaptic vesicle membra 60.5 29 0.00098 29.8 7.9 56 61-121 136-192 (349)
157 2g1u_A Hypothetical protein TM 60.4 4.9 0.00017 30.3 2.5 46 72-120 22-68 (155)
158 2jah_A Clavulanic acid dehydro 60.4 41 0.0014 27.1 8.5 55 69-123 8-63 (247)
159 4g81_D Putative hexonate dehyd 60.4 28 0.00095 28.9 7.4 73 69-141 10-84 (255)
160 4eue_A Putative reductase CA_C 60.2 94 0.0032 27.7 12.5 100 40-141 34-149 (418)
161 3edm_A Short chain dehydrogena 60.2 48 0.0016 26.9 8.9 72 69-140 9-83 (259)
162 3tjr_A Short chain dehydrogena 60.0 40 0.0014 28.2 8.5 71 69-139 32-104 (301)
163 2w37_A Ornithine carbamoyltran 59.9 26 0.00089 30.8 7.3 59 62-122 171-237 (359)
164 3qp9_A Type I polyketide synth 59.9 47 0.0016 30.6 9.6 60 65-124 248-323 (525)
165 3e8x_A Putative NAD-dependent 59.9 27 0.00091 27.8 7.1 52 69-123 22-74 (236)
166 3u5t_A 3-oxoacyl-[acyl-carrier 59.9 61 0.0021 26.5 9.5 72 69-140 28-102 (267)
167 2gk4_A Conserved hypothetical 59.8 16 0.00054 30.1 5.6 58 77-141 28-85 (232)
168 3lyl_A 3-oxoacyl-(acyl-carrier 59.7 38 0.0013 27.1 8.1 72 69-140 6-79 (247)
169 3ijr_A Oxidoreductase, short c 59.6 46 0.0016 27.6 8.9 72 69-140 48-122 (291)
170 3grk_A Enoyl-(acyl-carrier-pro 59.4 29 0.00097 29.1 7.5 73 69-141 32-107 (293)
171 1yb1_A 17-beta-hydroxysteroid 59.3 43 0.0015 27.4 8.5 72 69-140 32-105 (272)
172 1wwk_A Phosphoglycerate dehydr 59.2 82 0.0028 26.7 12.0 104 71-198 144-249 (307)
173 3tfo_A Putative 3-oxoacyl-(acy 59.1 45 0.0016 27.4 8.6 72 69-140 5-78 (264)
174 3gem_A Short chain dehydrogena 59.1 65 0.0022 26.2 9.5 69 70-141 29-97 (260)
175 4ep1_A Otcase, ornithine carba 59.1 34 0.0012 29.8 7.9 60 62-122 174-239 (340)
176 3ce6_A Adenosylhomocysteinase; 58.9 37 0.0013 31.2 8.5 97 63-187 269-365 (494)
177 3l6u_A ABC-type sugar transpor 58.8 71 0.0024 25.8 14.7 44 164-210 186-230 (293)
178 3p2y_A Alanine dehydrogenase/p 58.7 17 0.00057 32.3 6.0 48 71-121 186-233 (381)
179 1sby_A Alcohol dehydrogenase; 58.6 69 0.0024 25.6 10.1 53 69-122 6-61 (254)
180 4iin_A 3-ketoacyl-acyl carrier 58.5 48 0.0016 27.1 8.7 72 69-140 30-104 (271)
181 3is3_A 17BETA-hydroxysteroid d 58.2 54 0.0019 26.8 8.9 72 69-140 19-93 (270)
182 3qlj_A Short chain dehydrogena 58.0 61 0.0021 27.3 9.5 72 69-140 28-111 (322)
183 2fr1_A Erythromycin synthase, 57.7 56 0.0019 29.7 9.6 60 65-124 223-287 (486)
184 3ucx_A Short chain dehydrogena 57.7 51 0.0017 26.8 8.6 73 69-141 12-86 (264)
185 2rhc_B Actinorhodin polyketide 57.6 47 0.0016 27.3 8.5 72 69-140 23-96 (277)
186 4fcc_A Glutamate dehydrogenase 57.5 67 0.0023 29.1 9.8 51 49-99 215-265 (450)
187 3ic5_A Putative saccharopine d 57.5 43 0.0015 22.9 7.3 48 72-122 8-56 (118)
188 3s55_A Putative short-chain de 57.5 36 0.0012 28.0 7.8 71 69-139 11-95 (281)
189 4g2n_A D-isomer specific 2-hyd 57.3 66 0.0022 27.9 9.6 103 71-197 175-279 (345)
190 4e3z_A Putative oxidoreductase 57.2 64 0.0022 26.3 9.2 71 69-139 27-100 (272)
191 3m6i_A L-arabinitol 4-dehydrog 57.1 27 0.00092 30.1 7.1 58 59-119 171-228 (363)
192 3gaf_A 7-alpha-hydroxysteroid 57.0 41 0.0014 27.3 7.9 72 69-140 13-86 (256)
193 4dio_A NAD(P) transhydrogenase 56.8 23 0.00078 31.7 6.6 48 71-121 192-239 (405)
194 2gas_A Isoflavone reductase; N 56.6 24 0.00082 29.2 6.5 53 70-122 4-63 (307)
195 3oid_A Enoyl-[acyl-carrier-pro 56.4 54 0.0019 26.6 8.6 71 69-139 5-78 (258)
196 3ksu_A 3-oxoacyl-acyl carrier 56.4 66 0.0022 26.2 9.1 72 69-140 12-88 (262)
197 3v2g_A 3-oxoacyl-[acyl-carrier 56.3 66 0.0023 26.4 9.2 72 69-140 32-106 (271)
198 1leh_A Leucine dehydrogenase; 56.2 50 0.0017 28.9 8.6 64 51-118 153-220 (364)
199 1zq6_A Otcase, ornithine carba 55.9 30 0.001 30.4 7.0 44 79-122 207-257 (359)
200 1fmc_A 7 alpha-hydroxysteroid 55.9 41 0.0014 26.9 7.7 55 69-123 12-67 (255)
201 2dq4_A L-threonine 3-dehydroge 55.7 55 0.0019 27.9 8.8 57 58-120 155-213 (343)
202 2z5l_A Tylkr1, tylactone synth 55.7 61 0.0021 29.7 9.5 59 65-123 256-319 (511)
203 3icc_A Putative 3-oxoacyl-(acy 55.7 77 0.0026 25.3 9.9 56 69-124 8-65 (255)
204 3sju_A Keto reductase; short-c 55.5 45 0.0015 27.5 8.0 72 69-140 25-98 (279)
205 4da9_A Short-chain dehydrogena 55.2 36 0.0012 28.1 7.4 72 69-140 30-104 (280)
206 1ae1_A Tropinone reductase-I; 55.1 57 0.002 26.6 8.6 54 69-122 22-76 (273)
207 4dmm_A 3-oxoacyl-[acyl-carrier 55.0 60 0.0021 26.6 8.7 72 69-140 29-103 (269)
208 3osu_A 3-oxoacyl-[acyl-carrier 55.0 57 0.002 26.1 8.5 72 69-140 5-79 (246)
209 2rir_A Dipicolinate synthase, 54.5 49 0.0017 27.7 8.2 50 66-119 155-204 (300)
210 3sc4_A Short chain dehydrogena 54.4 90 0.0031 25.7 10.6 72 69-140 10-90 (285)
211 3imf_A Short chain dehydrogena 54.4 30 0.001 28.1 6.7 72 69-140 7-80 (257)
212 3gvx_A Glycerate dehydrogenase 54.3 37 0.0013 28.7 7.3 100 71-197 124-225 (290)
213 3l4b_C TRKA K+ channel protien 54.2 77 0.0026 24.8 11.1 49 72-123 3-52 (218)
214 1geg_A Acetoin reductase; SDR 54.1 59 0.002 26.2 8.4 71 70-140 4-76 (256)
215 1zmt_A Haloalcohol dehalogenas 53.8 26 0.00088 28.5 6.1 51 71-121 4-54 (254)
216 4iiu_A 3-oxoacyl-[acyl-carrier 53.8 62 0.0021 26.3 8.6 71 70-140 28-101 (267)
217 1gee_A Glucose 1-dehydrogenase 53.7 64 0.0022 25.9 8.6 55 69-123 8-64 (261)
218 3f9t_A TDC, L-tyrosine decarbo 53.7 79 0.0027 26.7 9.6 54 71-124 88-153 (397)
219 3gxh_A Putative phosphatase (D 53.6 68 0.0023 24.0 9.1 20 103-122 28-47 (157)
220 1ja9_A 4HNR, 1,3,6,8-tetrahydr 53.6 51 0.0018 26.6 8.0 55 69-123 22-78 (274)
221 3gbc_A Pyrazinamidase/nicotina 53.6 76 0.0026 24.6 8.6 57 59-119 120-183 (186)
222 1zem_A Xylitol dehydrogenase; 53.4 55 0.0019 26.6 8.1 55 69-123 8-63 (262)
223 2qq5_A DHRS1, dehydrogenase/re 53.4 57 0.0019 26.4 8.2 55 69-123 6-61 (260)
224 2hq1_A Glucose/ribitol dehydro 53.4 82 0.0028 24.9 10.3 55 69-123 6-62 (247)
225 2e7j_A SEP-tRNA:Cys-tRNA synth 53.0 50 0.0017 27.8 8.2 51 71-122 71-121 (371)
226 2zat_A Dehydrogenase/reductase 52.6 59 0.002 26.3 8.2 54 69-122 15-69 (260)
227 1edo_A Beta-keto acyl carrier 52.5 76 0.0026 25.0 8.8 55 70-124 3-59 (244)
228 3slk_A Polyketide synthase ext 52.3 64 0.0022 31.4 9.5 59 66-124 528-592 (795)
229 3v8b_A Putative dehydrogenase, 52.3 49 0.0017 27.4 7.8 72 69-140 29-102 (283)
230 2uvd_A 3-oxoacyl-(acyl-carrier 52.3 57 0.0019 26.1 8.0 54 69-122 5-60 (246)
231 3cxt_A Dehydrogenase with diff 52.2 51 0.0017 27.4 7.9 72 69-140 35-108 (291)
232 2g76_A 3-PGDH, D-3-phosphoglyc 51.9 1.2E+02 0.0039 26.2 12.0 103 71-197 167-271 (335)
233 3r3s_A Oxidoreductase; structu 51.9 58 0.002 27.1 8.2 71 69-139 50-124 (294)
234 3i6i_A Putative leucoanthocyan 51.8 31 0.0011 29.3 6.6 53 70-122 12-68 (346)
235 1vl8_A Gluconate 5-dehydrogena 51.8 60 0.0021 26.5 8.2 55 69-123 22-78 (267)
236 3huu_A Transcription regulator 51.8 98 0.0033 25.3 16.1 155 47-209 41-239 (305)
237 2ekl_A D-3-phosphoglycerate de 51.8 1.1E+02 0.0038 25.9 12.6 107 66-197 140-248 (313)
238 2c07_A 3-oxoacyl-(acyl-carrier 51.7 33 0.0011 28.3 6.6 55 69-123 45-100 (285)
239 3svt_A Short-chain type dehydr 51.2 78 0.0027 25.9 8.8 71 69-139 12-87 (281)
240 4ggo_A Trans-2-enoyl-COA reduc 51.0 56 0.0019 29.1 8.0 72 69-140 51-136 (401)
241 4a8t_A Putrescine carbamoyltra 50.9 65 0.0022 28.0 8.3 46 77-122 184-235 (339)
242 3aoe_E Glutamate dehydrogenase 50.9 79 0.0027 28.3 9.1 51 50-101 199-250 (419)
243 4e4t_A Phosphoribosylaminoimid 50.9 34 0.0012 30.5 6.8 36 65-101 32-67 (419)
244 3d64_A Adenosylhomocysteinase; 50.4 1.1E+02 0.0036 28.1 10.1 97 63-187 272-368 (494)
245 4ibo_A Gluconate dehydrogenase 50.3 47 0.0016 27.3 7.3 73 69-141 27-101 (271)
246 3u0b_A Oxidoreductase, short c 50.1 77 0.0026 28.5 9.1 72 69-141 214-285 (454)
247 1xq1_A Putative tropinone redu 50.1 63 0.0022 26.0 8.0 54 69-122 15-69 (266)
248 3ctm_A Carbonyl reductase; alc 50.1 77 0.0026 25.7 8.6 55 69-123 35-90 (279)
249 4hp8_A 2-deoxy-D-gluconate 3-d 49.7 59 0.002 26.8 7.6 55 68-123 9-63 (247)
250 1xg5_A ARPG836; short chain de 49.7 95 0.0032 25.3 9.1 54 69-122 33-89 (279)
251 4a8p_A Putrescine carbamoyltra 49.6 69 0.0024 28.0 8.3 47 76-122 161-213 (355)
252 3ged_A Short-chain dehydrogena 49.5 98 0.0034 25.3 9.0 68 70-140 4-72 (247)
253 3t7c_A Carveol dehydrogenase; 49.4 59 0.002 27.1 7.9 72 69-140 29-114 (299)
254 3gd5_A Otcase, ornithine carba 49.4 61 0.0021 28.0 7.9 60 62-122 152-217 (323)
255 1x1t_A D(-)-3-hydroxybutyrate 49.0 80 0.0028 25.4 8.5 55 69-123 5-62 (260)
256 3d3j_A Enhancer of mRNA-decapp 48.9 73 0.0025 27.2 8.3 32 70-101 134-168 (306)
257 3rwb_A TPLDH, pyridoxal 4-dehy 48.6 98 0.0034 24.8 8.9 68 69-139 7-76 (247)
258 1wma_A Carbonyl reductase [NAD 48.5 58 0.002 26.1 7.5 54 69-122 5-60 (276)
259 3i1j_A Oxidoreductase, short c 48.3 1E+02 0.0034 24.4 11.0 32 69-100 15-46 (247)
260 3ai3_A NADPH-sorbose reductase 48.0 79 0.0027 25.5 8.3 52 69-123 8-64 (263)
261 3sx2_A Putative 3-ketoacyl-(ac 48.0 58 0.002 26.6 7.5 72 69-140 14-99 (278)
262 2bma_A Glutamate dehydrogenase 47.8 69 0.0024 29.2 8.3 50 50-100 233-283 (470)
263 3d3k_A Enhancer of mRNA-decapp 47.4 63 0.0022 26.8 7.5 32 70-101 87-121 (259)
264 1p9o_A Phosphopantothenoylcyst 47.2 18 0.00061 31.2 4.1 26 76-101 63-88 (313)
265 2pd4_A Enoyl-[acyl-carrier-pro 47.1 94 0.0032 25.3 8.7 72 69-141 7-82 (275)
266 3pgx_A Carveol dehydrogenase; 47.1 59 0.002 26.6 7.4 72 69-140 16-102 (280)
267 1u7z_A Coenzyme A biosynthesis 47.1 35 0.0012 27.8 5.7 25 77-101 33-57 (226)
268 3q2o_A Phosphoribosylaminoimid 46.5 32 0.0011 30.0 5.9 36 65-101 11-46 (389)
269 3tox_A Short chain dehydrogena 46.5 49 0.0017 27.4 6.8 71 69-139 9-81 (280)
270 3grp_A 3-oxoacyl-(acyl carrier 46.4 1E+02 0.0035 25.1 8.8 68 69-139 28-97 (266)
271 1xu9_A Corticosteroid 11-beta- 46.3 88 0.003 25.6 8.4 54 69-122 29-84 (286)
272 3rss_A Putative uncharacterize 46.2 70 0.0024 29.4 8.2 51 69-119 53-110 (502)
273 3k4h_A Putative transcriptiona 46.1 1.2E+02 0.0039 24.5 16.8 35 173-209 191-229 (292)
274 3get_A Histidinol-phosphate am 46.0 74 0.0025 26.8 8.1 51 72-123 85-135 (365)
275 3cq5_A Histidinol-phosphate am 46.0 50 0.0017 28.1 7.0 51 72-124 95-146 (369)
276 3rih_A Short chain dehydrogena 45.8 80 0.0027 26.3 8.1 72 69-140 42-116 (293)
277 4hb9_A Similarities with proba 45.5 24 0.00081 30.4 4.8 28 72-99 4-31 (412)
278 1iy8_A Levodione reductase; ox 45.5 83 0.0028 25.5 8.1 33 69-101 14-46 (267)
279 3ly1_A Putative histidinol-pho 45.4 55 0.0019 27.4 7.1 52 72-124 71-122 (354)
280 3oz2_A Digeranylgeranylglycero 45.4 23 0.00079 30.2 4.7 28 72-99 7-34 (397)
281 3orq_A N5-carboxyaminoimidazol 45.4 35 0.0012 29.7 5.9 35 66-101 10-44 (377)
282 3aog_A Glutamate dehydrogenase 45.4 1.1E+02 0.0036 27.7 9.1 51 50-101 216-267 (440)
283 2tmg_A Protein (glutamate dehy 45.4 1.4E+02 0.0048 26.7 9.8 51 50-101 190-242 (415)
284 3uve_A Carveol dehydrogenase ( 45.3 68 0.0023 26.3 7.5 72 69-140 12-101 (286)
285 1qyd_A Pinoresinol-lariciresin 45.3 49 0.0017 27.3 6.7 53 70-122 6-63 (313)
286 3oig_A Enoyl-[acyl-carrier-pro 45.2 1.2E+02 0.0041 24.4 10.4 71 69-140 8-84 (266)
287 3c1o_A Eugenol synthase; pheny 45.2 44 0.0015 27.9 6.4 53 70-122 6-64 (321)
288 2dbq_A Glyoxylate reductase; D 45.1 1.4E+02 0.005 25.4 12.0 103 71-197 152-256 (334)
289 3mje_A AMPHB; rossmann fold, o 45.0 1.4E+02 0.0047 27.3 10.0 56 69-124 240-300 (496)
290 3n74_A 3-ketoacyl-(acyl-carrie 45.0 1.1E+02 0.0039 24.4 8.8 69 69-140 10-80 (261)
291 1qsg_A Enoyl-[acyl-carrier-pro 44.7 1.2E+02 0.004 24.5 8.9 71 69-140 10-84 (265)
292 3ioy_A Short-chain dehydrogena 44.6 75 0.0026 26.8 7.8 73 69-141 9-85 (319)
293 1qyc_A Phenylcoumaran benzylic 44.6 53 0.0018 27.0 6.8 53 70-122 6-64 (308)
294 3k31_A Enoyl-(acyl-carrier-pro 44.4 86 0.0029 26.0 8.1 71 69-140 31-105 (296)
295 2bkw_A Alanine-glyoxylate amin 44.4 63 0.0021 27.3 7.4 52 71-123 61-117 (385)
296 4egf_A L-xylulose reductase; s 44.4 67 0.0023 26.1 7.3 72 69-140 21-95 (266)
297 3q98_A Transcarbamylase; rossm 44.3 45 0.0015 29.7 6.4 44 79-122 209-258 (399)
298 3rd5_A Mypaa.01249.C; ssgcid, 44.3 1.2E+02 0.004 24.9 8.9 53 69-124 17-70 (291)
299 3pk0_A Short-chain dehydrogena 44.3 73 0.0025 25.8 7.5 72 69-140 11-85 (262)
300 3rot_A ABC sugar transporter, 44.2 1.3E+02 0.0044 24.5 16.4 46 162-210 177-227 (297)
301 1w6u_A 2,4-dienoyl-COA reducta 44.2 86 0.0029 25.8 8.1 72 69-140 27-101 (302)
302 4dgs_A Dehydrogenase; structur 44.2 1.6E+02 0.0053 25.4 10.0 92 71-189 173-264 (340)
303 1h5q_A NADP-dependent mannitol 44.2 87 0.003 25.0 7.9 73 69-141 15-90 (265)
304 3grf_A Ornithine carbamoyltran 44.1 55 0.0019 28.3 6.8 45 78-122 172-226 (328)
305 3pxx_A Carveol dehydrogenase; 44.0 78 0.0027 25.8 7.7 72 69-140 11-96 (287)
306 4e5n_A Thermostable phosphite 43.9 1.5E+02 0.0052 25.3 10.9 104 71-197 147-252 (330)
307 2ywl_A Thioredoxin reductase r 43.7 31 0.001 26.1 4.7 31 71-101 3-33 (180)
308 2b4q_A Rhamnolipids biosynthes 43.7 76 0.0026 26.0 7.6 32 69-100 30-61 (276)
309 2j6i_A Formate dehydrogenase; 43.6 1.6E+02 0.0055 25.5 11.1 108 67-197 163-273 (364)
310 2wyu_A Enoyl-[acyl carrier pro 43.5 1.1E+02 0.0037 24.6 8.5 54 69-122 9-66 (261)
311 4fk1_A Putative thioredoxin re 43.5 27 0.00092 29.1 4.7 29 71-99 8-36 (304)
312 2h78_A Hibadh, 3-hydroxyisobut 43.5 69 0.0024 26.6 7.4 43 72-117 6-48 (302)
313 2izz_A Pyrroline-5-carboxylate 43.4 1.5E+02 0.005 25.0 13.3 118 72-211 25-146 (322)
314 4fgs_A Probable dehydrogenase 43.3 1E+02 0.0035 25.6 8.3 70 69-141 30-101 (273)
315 4dqx_A Probable oxidoreductase 43.2 1.2E+02 0.0043 24.7 8.9 68 69-139 28-97 (277)
316 1hdc_A 3-alpha, 20 beta-hydrox 43.2 1.1E+02 0.0038 24.5 8.4 51 69-122 6-57 (254)
317 3oec_A Carveol dehydrogenase ( 43.0 72 0.0025 26.8 7.5 72 69-140 47-132 (317)
318 2yfk_A Aspartate/ornithine car 42.8 47 0.0016 29.8 6.3 44 79-122 206-255 (418)
319 3h2s_A Putative NADH-flavin re 42.8 75 0.0026 24.6 7.1 49 71-122 3-51 (224)
320 2wm3_A NMRA-like family domain 42.7 94 0.0032 25.4 8.1 52 70-122 7-59 (299)
321 3ftp_A 3-oxoacyl-[acyl-carrier 42.6 66 0.0023 26.4 7.0 72 69-140 29-102 (270)
322 1a3w_A Pyruvate kinase; allost 42.6 1.6E+02 0.0054 27.0 9.9 123 84-212 283-428 (500)
323 4eso_A Putative oxidoreductase 42.4 1.1E+02 0.0038 24.6 8.3 69 69-140 9-79 (255)
324 4a5l_A Thioredoxin reductase; 42.0 24 0.00082 29.3 4.2 29 71-99 6-34 (314)
325 3u9l_A 3-oxoacyl-[acyl-carrier 42.0 1.6E+02 0.0053 24.9 9.8 55 69-123 6-66 (324)
326 1yxm_A Pecra, peroxisomal tran 42.0 1.2E+02 0.004 25.0 8.6 55 69-123 19-79 (303)
327 3tsc_A Putative oxidoreductase 42.0 94 0.0032 25.3 7.9 72 69-140 12-98 (277)
328 1gtm_A Glutamate dehydrogenase 41.9 88 0.003 28.0 8.0 51 50-101 192-245 (419)
329 1jzt_A Hypothetical 27.5 kDa p 41.9 59 0.002 26.7 6.4 32 70-101 60-94 (246)
330 3ppi_A 3-hydroxyacyl-COA dehyd 41.8 1.3E+02 0.0045 24.4 8.8 52 69-123 31-83 (281)
331 4e6p_A Probable sorbitol dehyd 41.7 1.3E+02 0.0046 24.0 8.9 70 69-141 9-80 (259)
332 4gcm_A TRXR, thioredoxin reduc 41.6 30 0.001 28.8 4.7 28 71-98 8-35 (312)
333 2gqw_A Ferredoxin reductase; f 41.6 67 0.0023 28.1 7.2 52 68-120 145-206 (408)
334 2cul_A Glucose-inhibited divis 41.5 29 0.001 27.7 4.5 30 72-101 6-35 (232)
335 1pg5_A Aspartate carbamoyltran 41.3 25 0.00087 30.0 4.1 57 62-122 144-205 (299)
336 3ffh_A Histidinol-phosphate am 41.2 43 0.0015 28.3 5.8 52 72-124 87-138 (363)
337 3gdg_A Probable NADP-dependent 41.2 95 0.0033 25.0 7.7 73 69-141 21-99 (267)
338 3zv4_A CIS-2,3-dihydrobiphenyl 40.9 1.4E+02 0.0049 24.3 8.9 69 69-140 6-76 (281)
339 2vhw_A Alanine dehydrogenase; 40.9 65 0.0022 28.1 7.0 48 68-119 168-216 (377)
340 2vdc_G Glutamate synthase [NAD 40.8 96 0.0033 27.8 8.2 52 68-120 264-321 (456)
341 3gvp_A Adenosylhomocysteinase 40.8 1.2E+02 0.0039 27.4 8.5 98 62-187 214-311 (435)
342 2pi1_A D-lactate dehydrogenase 40.8 1.7E+02 0.0059 25.0 11.3 102 71-197 143-246 (334)
343 2o8n_A APOA-I binding protein; 40.7 38 0.0013 28.4 5.1 32 70-101 81-115 (265)
344 1gdh_A D-glycerate dehydrogena 40.7 1.7E+02 0.0057 24.8 11.9 104 71-197 148-254 (320)
345 4fc7_A Peroxisomal 2,4-dienoyl 40.6 97 0.0033 25.3 7.7 72 69-140 28-102 (277)
346 4dll_A 2-hydroxy-3-oxopropiona 40.5 79 0.0027 26.7 7.3 44 71-117 33-76 (320)
347 2o23_A HADH2 protein; HSD17B10 40.3 1.4E+02 0.0047 23.8 9.9 52 69-122 13-64 (265)
348 1xkq_A Short-chain reductase f 40.1 86 0.0029 25.6 7.3 32 69-100 7-38 (280)
349 1hxh_A 3BETA/17BETA-hydroxyste 40.1 1.4E+02 0.0048 23.8 8.6 52 69-123 7-59 (253)
350 1mx3_A CTBP1, C-terminal bindi 39.9 1.8E+02 0.0062 25.0 11.3 104 71-197 170-275 (347)
351 3l6e_A Oxidoreductase, short-c 39.9 1.3E+02 0.0043 23.9 8.2 32 69-100 4-35 (235)
352 3ipc_A ABC transporter, substr 39.8 1.6E+02 0.0055 24.4 9.9 147 53-211 59-229 (356)
353 3gk3_A Acetoacetyl-COA reducta 39.8 93 0.0032 25.2 7.5 72 69-140 26-100 (269)
354 2x9g_A PTR1, pteridine reducta 39.7 97 0.0033 25.4 7.7 55 69-123 24-81 (288)
355 2hmt_A YUAA protein; RCK, KTN, 39.6 54 0.0018 23.3 5.4 45 72-119 9-53 (144)
356 3k92_A NAD-GDH, NAD-specific g 39.6 71 0.0024 28.7 6.9 51 50-101 202-253 (424)
357 3v8e_A Nicotinamidase; hydrola 39.5 1.1E+02 0.0039 24.3 7.7 51 69-119 155-214 (216)
358 2yq5_A D-isomer specific 2-hyd 39.5 1.8E+02 0.0061 25.1 9.4 101 71-197 150-252 (343)
359 2cfc_A 2-(R)-hydroxypropyl-COM 39.4 71 0.0024 25.4 6.6 32 70-101 4-35 (250)
360 2ph3_A 3-oxoacyl-[acyl carrier 39.4 99 0.0034 24.3 7.5 51 70-120 3-55 (245)
361 2p91_A Enoyl-[acyl-carrier-pro 39.3 1E+02 0.0035 25.2 7.7 71 69-140 22-96 (285)
362 3g0o_A 3-hydroxyisobutyrate de 39.3 81 0.0028 26.3 7.1 44 72-118 10-53 (303)
363 2bd0_A Sepiapterin reductase; 39.1 1.2E+02 0.0042 23.8 8.0 51 70-123 4-65 (244)
364 3kzv_A Uncharacterized oxidore 39.1 67 0.0023 25.9 6.4 68 70-140 4-75 (254)
365 3k9c_A Transcriptional regulat 39.1 1.5E+02 0.0052 23.9 17.8 36 173-210 184-223 (289)
366 1lss_A TRK system potassium up 39.1 99 0.0034 21.7 7.7 47 72-121 7-54 (140)
367 3dfz_A SIRC, precorrin-2 dehyd 39.0 52 0.0018 26.7 5.6 112 72-198 34-160 (223)
368 2oln_A NIKD protein; flavoprot 38.7 34 0.0012 29.6 4.7 30 71-100 6-35 (397)
369 3tl3_A Short-chain type dehydr 38.6 1E+02 0.0035 24.7 7.5 50 69-123 10-59 (257)
370 3slk_A Polyketide synthase ext 38.4 21 0.00071 34.9 3.5 40 61-100 339-378 (795)
371 1xhl_A Short-chain dehydrogena 38.3 1E+02 0.0036 25.5 7.7 33 69-101 27-59 (297)
372 3n58_A Adenosylhomocysteinase; 38.3 1.3E+02 0.0045 27.3 8.5 98 62-187 241-338 (464)
373 3dme_A Conserved exported prot 38.1 36 0.0012 28.7 4.7 31 71-101 6-36 (369)
374 2ew2_A 2-dehydropantoate 2-red 38.0 83 0.0028 26.0 7.0 45 72-119 6-50 (316)
375 4amu_A Ornithine carbamoyltran 38.0 75 0.0026 27.9 6.7 51 72-122 183-243 (365)
376 1bgv_A Glutamate dehydrogenase 38.0 89 0.0031 28.3 7.4 50 50-100 211-261 (449)
377 4hvk_A Probable cysteine desul 38.0 59 0.002 27.3 6.1 54 71-124 62-121 (382)
378 4dry_A 3-oxoacyl-[acyl-carrier 37.9 1.7E+02 0.0057 24.0 10.6 32 69-100 34-65 (281)
379 2z1n_A Dehydrogenase; reductas 37.8 1.4E+02 0.0048 23.9 8.3 32 69-100 8-39 (260)
380 3ksm_A ABC-type sugar transpor 37.8 1.5E+02 0.0051 23.4 16.9 44 163-209 177-222 (276)
381 3l77_A Short-chain alcohol deh 37.8 79 0.0027 24.9 6.6 55 69-123 3-59 (235)
382 4hy3_A Phosphoglycerate oxidor 37.8 2E+02 0.007 25.0 12.4 111 71-208 178-290 (365)
383 2wsb_A Galactitol dehydrogenas 37.8 1.4E+02 0.0048 23.6 8.2 33 69-101 12-44 (254)
384 3rp8_A Flavoprotein monooxygen 37.7 37 0.0013 29.6 4.8 31 71-101 25-55 (407)
385 3nra_A Aspartate aminotransfer 37.7 1.9E+02 0.0064 24.5 9.6 51 72-123 105-155 (407)
386 3ado_A Lambda-crystallin; L-gu 37.5 37 0.0013 29.2 4.7 30 71-100 8-37 (319)
387 3r3j_A Glutamate dehydrogenase 37.5 1E+02 0.0035 28.0 7.6 51 49-100 219-270 (456)
388 3op4_A 3-oxoacyl-[acyl-carrier 37.1 1.3E+02 0.0044 24.0 7.9 32 69-100 10-41 (248)
389 3gvc_A Oxidoreductase, probabl 37.1 1.2E+02 0.0043 24.7 7.9 68 69-139 30-99 (277)
390 3l6d_A Putative oxidoreductase 37.1 83 0.0028 26.4 6.9 43 72-117 12-54 (306)
391 3h75_A Periplasmic sugar-bindi 37.0 1.8E+02 0.0063 24.2 15.7 46 163-211 195-244 (350)
392 3h9u_A Adenosylhomocysteinase; 37.0 1.5E+02 0.0052 26.6 8.7 97 63-187 206-302 (436)
393 3obb_A Probable 3-hydroxyisobu 37.0 62 0.0021 27.3 6.0 45 72-119 6-50 (300)
394 3sds_A Ornithine carbamoyltran 36.8 1.4E+02 0.0046 26.1 8.2 54 68-122 188-250 (353)
395 3doj_A AT3G25530, dehydrogenas 36.8 60 0.002 27.3 5.9 44 71-117 23-66 (310)
396 3snr_A Extracellular ligand-bi 36.7 1.8E+02 0.0061 24.0 12.1 147 53-211 58-226 (362)
397 4fn4_A Short chain dehydrogena 36.6 1.7E+02 0.006 23.8 9.2 73 106-184 22-94 (254)
398 1eg5_A Aminotransferase; PLP-d 36.5 76 0.0026 26.7 6.6 52 72-123 64-121 (384)
399 3r2j_A Alpha/beta-hydrolase-li 36.3 1.5E+02 0.0053 23.7 8.1 54 69-122 158-218 (227)
400 1id1_A Putative potassium chan 36.3 58 0.002 23.9 5.2 30 72-101 6-35 (153)
401 3alj_A 2-methyl-3-hydroxypyrid 36.2 41 0.0014 29.0 4.8 31 71-101 13-43 (379)
402 3egc_A Putative ribose operon 36.1 1.7E+02 0.0058 23.5 16.7 36 173-210 185-224 (291)
403 3hut_A Putative branched-chain 35.9 1.9E+02 0.0064 24.0 11.3 146 53-210 61-229 (358)
404 3cgv_A Geranylgeranyl reductas 35.7 40 0.0014 28.9 4.7 31 71-101 6-36 (397)
405 3ef6_A Toluene 1,2-dioxygenase 35.7 1E+02 0.0035 26.8 7.5 49 71-119 145-203 (410)
406 3tzq_B Short-chain type dehydr 35.7 1.7E+02 0.006 23.6 10.7 34 69-102 12-45 (271)
407 8abp_A L-arabinose-binding pro 35.7 1.7E+02 0.006 23.6 12.8 48 163-211 185-235 (306)
408 3o26_A Salutaridine reductase; 35.6 1.8E+02 0.0061 23.7 11.5 25 161-186 79-103 (311)
409 3b8x_A WBDK, pyridoxamine 5-ph 35.6 1.2E+02 0.0042 25.7 7.9 53 72-124 52-110 (390)
410 2pnf_A 3-oxoacyl-[acyl-carrier 35.5 1.6E+02 0.0055 23.1 9.3 52 69-123 8-64 (248)
411 3gyb_A Transcriptional regulat 35.5 1.7E+02 0.0057 23.3 8.9 44 163-209 166-213 (280)
412 3o74_A Fructose transport syst 35.4 1.6E+02 0.0056 23.2 16.0 46 163-210 169-217 (272)
413 3oj0_A Glutr, glutamyl-tRNA re 35.4 65 0.0022 23.4 5.3 27 72-98 24-50 (144)
414 3fbs_A Oxidoreductase; structu 35.3 1E+02 0.0035 24.8 7.1 48 71-119 143-192 (297)
415 3hu5_A Isochorismatase family 35.3 1E+02 0.0035 24.2 6.7 60 59-122 121-187 (204)
416 1yvv_A Amine oxidase, flavin-c 35.3 39 0.0013 28.2 4.5 29 72-100 5-33 (336)
417 4egf_A L-xylulose reductase; s 35.3 1.7E+02 0.0057 23.6 8.4 86 94-185 21-109 (266)
418 1oth_A Protein (ornithine tran 35.2 69 0.0024 27.6 6.0 51 72-122 158-215 (321)
419 2ekp_A 2-deoxy-D-gluconate 3-d 35.1 1.4E+02 0.0049 23.5 7.8 49 70-123 4-52 (239)
420 1ryi_A Glycine oxidase; flavop 34.7 43 0.0015 28.6 4.7 32 70-101 18-49 (382)
421 2x3n_A Probable FAD-dependent 34.7 43 0.0015 29.0 4.7 31 71-101 8-38 (399)
422 4fc7_A Peroxisomal 2,4-dienoyl 34.6 1.4E+02 0.0047 24.3 7.8 86 94-185 28-116 (277)
423 3k7y_A Aspartate aminotransfer 34.6 2.3E+02 0.0079 24.7 10.3 77 43-123 71-151 (405)
424 2dgk_A GAD-beta, GADB, glutama 34.6 95 0.0032 27.3 7.1 52 72-124 106-169 (452)
425 3jtm_A Formate dehydrogenase, 34.6 2.2E+02 0.0077 24.5 13.1 105 71-197 166-272 (351)
426 3v2h_A D-beta-hydroxybutyrate 34.5 1.9E+02 0.0064 23.6 11.9 32 69-100 26-57 (281)
427 2w2k_A D-mandelate dehydrogena 34.5 2.2E+02 0.0075 24.4 12.5 105 71-197 165-272 (348)
428 4e12_A Diketoreductase; oxidor 34.4 95 0.0033 25.6 6.7 29 72-100 7-35 (283)
429 3i4f_A 3-oxoacyl-[acyl-carrier 34.4 94 0.0032 25.0 6.6 72 69-140 8-82 (264)
430 4ffl_A PYLC; amino acid, biosy 34.3 47 0.0016 28.5 4.9 30 71-100 3-32 (363)
431 1mxh_A Pteridine reductase 2; 34.2 1.8E+02 0.0062 23.4 9.0 32 69-100 12-43 (276)
432 4dyv_A Short-chain dehydrogena 34.2 1.6E+02 0.0055 24.0 8.1 68 70-140 30-99 (272)
433 2vou_A 2,6-dihydroxypyridine h 34.1 46 0.0016 28.9 4.8 46 71-116 7-63 (397)
434 1yo6_A Putative carbonyl reduc 34.1 88 0.003 24.6 6.3 33 69-101 4-38 (250)
435 2pd6_A Estradiol 17-beta-dehyd 34.0 75 0.0026 25.4 5.9 32 69-100 8-39 (264)
436 3hba_A Putative phosphosugar i 33.9 1.7E+02 0.0058 25.0 8.4 23 69-91 205-227 (334)
437 1q1r_A Putidaredoxin reductase 33.8 86 0.0029 27.6 6.7 49 71-119 151-209 (431)
438 4g81_D Putative hexonate dehyd 33.7 2E+02 0.0067 23.6 9.8 74 106-185 24-97 (255)
439 1vjo_A Alanine--glyoxylate ami 33.7 89 0.003 26.5 6.6 51 71-123 87-140 (393)
440 3tpc_A Short chain alcohol deh 33.7 1.8E+02 0.0062 23.2 9.6 70 69-140 8-78 (257)
441 1ek6_A UDP-galactose 4-epimera 33.6 1.5E+02 0.005 24.7 8.0 31 70-100 4-34 (348)
442 3r6d_A NAD-dependent epimerase 33.5 1E+02 0.0035 23.9 6.5 49 71-122 8-58 (221)
443 3jx9_A Putative phosphoheptose 33.4 65 0.0022 25.0 5.0 37 64-100 74-112 (170)
444 3nix_A Flavoprotein/dehydrogen 33.3 41 0.0014 29.2 4.4 31 71-101 7-37 (421)
445 1yac_A Ycacgp, YCAC gene produ 33.2 92 0.0031 24.6 6.1 59 59-121 100-165 (208)
446 1uls_A Putative 3-oxoacyl-acyl 33.2 1.8E+02 0.0062 23.0 10.1 52 69-123 6-58 (245)
447 3fsl_A Aromatic-amino-acid ami 33.1 97 0.0033 26.4 6.8 53 71-123 97-150 (397)
448 2f1k_A Prephenate dehydrogenas 33.1 1.2E+02 0.004 24.7 7.1 43 72-117 3-45 (279)
449 2wt9_A Nicotinamidase; hydrola 33.1 1.9E+02 0.0064 23.2 8.7 58 60-121 163-228 (235)
450 3m9w_A D-xylose-binding peripl 33.0 2E+02 0.0068 23.4 13.2 45 163-209 177-223 (313)
451 1ebd_A E3BD, dihydrolipoamide 32.9 1.6E+02 0.0054 26.0 8.4 50 71-120 172-230 (455)
452 1v59_A Dihydrolipoamide dehydr 32.9 1.4E+02 0.0047 26.6 8.0 49 71-119 185-242 (478)
453 3mc6_A Sphingosine-1-phosphate 32.8 85 0.0029 28.0 6.6 52 72-123 129-187 (497)
454 2uzz_A N-methyl-L-tryptophan o 32.8 46 0.0016 28.3 4.5 30 71-100 4-33 (372)
455 2xdo_A TETX2 protein; tetracyc 32.6 45 0.0015 29.0 4.5 31 71-101 28-58 (398)
456 2vz8_A Fatty acid synthase; tr 32.6 3.1E+02 0.011 30.5 11.8 59 66-124 1882-1945(2512)
457 3dzz_A Putative pyridoxal 5'-p 32.6 1.1E+02 0.0036 26.0 6.9 51 72-123 88-138 (391)
458 1k0i_A P-hydroxybenzoate hydro 32.6 40 0.0014 29.1 4.2 29 72-100 5-33 (394)
459 3nnk_A Ureidoglycine-glyoxylat 32.4 1.3E+02 0.0046 25.5 7.6 52 72-124 67-120 (411)
460 3oet_A Erythronate-4-phosphate 32.4 1E+02 0.0034 27.2 6.7 132 42-197 89-226 (381)
461 2x5d_A Probable aminotransfera 32.4 1.4E+02 0.0048 25.6 7.8 52 72-124 102-153 (412)
462 3o94_A Nicotinamidase; hydrola 32.4 1.7E+02 0.0059 23.1 7.7 54 69-122 144-205 (211)
463 3lxd_A FAD-dependent pyridine 32.3 62 0.0021 28.3 5.4 49 72-120 155-213 (415)
464 3hwr_A 2-dehydropantoate 2-red 32.1 1.1E+02 0.0038 25.7 6.8 44 72-119 22-65 (318)
465 1oaa_A Sepiapterin reductase; 32.0 1.5E+02 0.0052 23.6 7.5 55 69-123 7-67 (259)
466 2eez_A Alanine dehydrogenase; 32.0 1.2E+02 0.004 26.3 7.1 47 69-119 167-214 (369)
467 1c0p_A D-amino acid oxidase; a 32.0 53 0.0018 27.9 4.8 30 71-100 8-37 (363)
468 1im5_A 180AA long hypothetical 32.0 1.7E+02 0.0057 22.2 8.6 57 59-119 115-178 (180)
469 3a11_A Translation initiation 32.0 1.3E+02 0.0043 26.0 7.2 58 65-123 139-200 (338)
470 2dtx_A Glucose 1-dehydrogenase 31.9 1.8E+02 0.0063 23.4 8.0 33 69-101 9-41 (264)
471 2gf3_A MSOX, monomeric sarcosi 31.8 51 0.0017 28.1 4.7 30 71-100 5-34 (389)
472 3lvm_A Cysteine desulfurase; s 31.7 1.1E+02 0.0039 26.2 7.1 53 72-124 88-146 (423)
473 3m1a_A Putative dehydrogenase; 31.7 1.7E+02 0.0059 23.6 7.9 52 69-122 6-57 (281)
474 3fbs_A Oxidoreductase; structu 31.7 55 0.0019 26.5 4.7 30 71-100 4-33 (297)
475 3pef_A 6-phosphogluconate dehy 31.5 84 0.0029 25.9 5.9 43 72-117 4-46 (287)
476 3l77_A Short-chain alcohol deh 31.5 1.3E+02 0.0045 23.5 6.9 74 106-185 17-91 (235)
477 1gpj_A Glutamyl-tRNA reductase 31.4 1E+02 0.0036 27.0 6.8 22 72-93 170-191 (404)
478 2ch1_A 3-hydroxykynurenine tra 31.4 1.1E+02 0.0037 26.0 6.8 51 72-123 72-124 (396)
479 3gdg_A Probable NADP-dependent 31.4 2E+02 0.0068 22.9 8.6 88 94-185 21-112 (267)
480 1vb5_A Translation initiation 31.3 1.2E+02 0.004 25.3 6.7 39 65-104 107-145 (276)
481 3lf2_A Short chain oxidoreduct 31.3 2E+02 0.0067 23.1 8.1 32 69-100 9-40 (265)
482 3tum_A Shikimate dehydrogenase 31.2 2.2E+02 0.0076 23.5 8.9 69 30-101 88-157 (269)
483 3o8q_A Shikimate 5-dehydrogena 31.2 86 0.003 26.2 5.9 65 30-98 89-156 (281)
484 3pk0_A Short-chain dehydrogena 31.1 2E+02 0.007 23.0 8.3 74 106-185 25-99 (262)
485 3ka7_A Oxidoreductase; structu 31.1 52 0.0018 28.6 4.7 29 72-100 3-31 (425)
486 4at0_A 3-ketosteroid-delta4-5a 31.1 51 0.0017 30.0 4.7 29 71-99 43-71 (510)
487 2dwc_A PH0318, 433AA long hypo 31.0 2.7E+02 0.0091 24.3 9.6 30 72-101 22-51 (433)
488 1wpn_A Manganese-dependent ino 30.9 94 0.0032 23.9 5.8 37 80-116 19-55 (188)
489 3lf2_A Short chain oxidoreduct 30.8 2.1E+02 0.0071 23.0 8.5 15 249-263 231-245 (265)
490 4h31_A Otcase, ornithine carba 30.8 1E+02 0.0035 26.9 6.4 51 72-122 184-242 (358)
491 1v9l_A Glutamate dehydrogenase 30.5 96 0.0033 27.8 6.3 51 50-101 191-242 (421)
492 2bm8_A Cephalosporin hydroxyla 30.5 47 0.0016 26.8 4.0 37 176-212 84-120 (236)
493 3fg2_P Putative rubredoxin red 30.3 58 0.002 28.4 4.9 50 71-120 144-203 (404)
494 3f1l_A Uncharacterized oxidore 30.3 2.1E+02 0.007 22.8 10.8 32 69-100 13-44 (252)
495 2a4k_A 3-oxoacyl-[acyl carrier 30.3 2.1E+02 0.0073 23.0 9.2 51 69-122 7-58 (263)
496 3h5t_A Transcriptional regulat 30.3 2.4E+02 0.0083 23.6 13.4 35 173-209 267-305 (366)
497 3ihm_A Styrene monooxygenase A 30.2 46 0.0016 29.4 4.2 31 71-101 24-54 (430)
498 3c96_A Flavin-containing monoo 30.1 55 0.0019 28.5 4.7 30 71-100 6-36 (410)
499 3cty_A Thioredoxin reductase; 30.0 60 0.002 26.9 4.7 30 71-100 18-47 (319)
500 3t4e_A Quinate/shikimate dehyd 29.9 2.3E+02 0.008 23.9 8.5 64 30-98 112-178 (312)
No 1
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=100.00 E-value=4.9e-64 Score=451.88 Aligned_cols=267 Identities=58% Similarity=0.999 Sum_probs=248.9
Q ss_pred hhhHHHhhccCCCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHH
Q 024040 6 EIKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLA 85 (273)
Q Consensus 6 ~~~~~i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A 85 (273)
.+.+.|.+.+|+|||+++++|++.+|++||+|+|++|||||||+|++.+++.+|.++|.+.||.++||++|+||||+|+|
T Consensus 24 ~i~~~i~~lIG~TPLv~~~~Ls~~~G~~IylK~E~lnptGSfK~RgA~~~i~~a~~~g~l~~g~~~Vv~aSsGN~g~alA 103 (344)
T 3vc3_A 24 NIKKHVSQLIGRTPLVYLNKVTEGCGAYVAVKQEMMQPTASIADRPAYAMITDAEEKNLITPGKTTLIEPTSGNMGISMA 103 (344)
T ss_dssp SCBSSGGGGSCCCCEEECCSTTTTCCSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTCCCTTTCEEEEECSSHHHHHHH
T ss_pred hhhccHhhhcCCCceEECcccchhhCCEEEEEecCCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCEEEEeCCcHHHHHHH
Confidence 46778999999999999999999999999999999999999999999999999999999999877799999999999999
Q ss_pred HHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCCCCCCcchHhhhhchHH
Q 024040 86 FIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGP 165 (273)
Q Consensus 86 ~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~ 165 (273)
++|+++|++|+||||+++++.|+++|+.|||+|+.++...++.++...+.++..+.++.+|++||+||.++.+||.|++.
T Consensus 104 ~~aa~~G~~~~IvmP~~~~~~k~~~~~~~GA~Vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~np~~~~a~~~t~g~ 183 (344)
T 3vc3_A 104 FMAAMKGYKMVLTMPSYTSLERRVTMRAFGAELILTDPAKGMGGTVKKAYELLENTPNAHMLQQFSNPANTQVHFETTGP 183 (344)
T ss_dssp HHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHSTTEECCCTTTCHHHHHHHHHTHHH
T ss_pred HHHHHcCCcEEEEECCCChHHHHHHHHHcCCEEEEECCCCcchHHHHHHHHHHhhccCceeccccccchhHHHHHHHHHH
Confidence 99999999999999999999999999999999999986544556666666666666789999999999998889999999
Q ss_pred HHHHhhCCCcCEEEEecCCCccHHHHHHHHHhhCCCcEEEEEecCCCccccCCCCCCccccccCCCCCcccccccCCCeE
Q 024040 166 EIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLDEV 245 (273)
Q Consensus 166 Ei~~q~~~~~d~iv~p~G~Gg~~~Gi~~~~k~~~~~~~vigVe~~~~~~~~~~~~~~~~~~glg~~~~~~~~~~~~~d~~ 245 (273)
||++|+++.+|+||+|+|+||+++|++.++|+.+|+++||+|||.+++.+..+++.++.+++++.+..+...+.+.+|++
T Consensus 184 EI~eq~~~~~d~vv~~vGgGG~~~Gi~~~~k~~~p~v~vigVep~~s~~l~~~~~~~~~i~g~g~~~~~~~~~~~~~d~~ 263 (344)
T 3vc3_A 184 EIWEDTNGQVDIFVMGIGSGGTVSGVGQYLKSKNPNVKIYGVEPSESNVLNGGKPGPHHITGNGVGFKPDILDLDVMEKV 263 (344)
T ss_dssp HHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCGGGTCCCCCCSCTTSCCSSCCTTCCGGGCSEE
T ss_pred HHHHHhCCCceEEEEecCCccchHHHhhhhHhhCCCceEEEEcCCCChhhcCCCCCCeeEecccccccCcccchhhceEE
Confidence 99999988999999999999999999999999999999999999999999888888888889998877777788899999
Q ss_pred EEeCHHHHHHHHHHHHHHcCceecccC
Q 024040 246 ITVSSEEAIETSKLLALKEGLLRQLLY 272 (273)
Q Consensus 246 v~v~d~e~~~a~~~l~~~eGi~~~ps~ 272 (273)
+.|+|+|+++++++|+++||++++|||
T Consensus 264 v~v~d~eai~a~~~L~~~eGi~v~~ss 290 (344)
T 3vc3_A 264 LEVSSEDAVNMARVLALKEGLMVGISS 290 (344)
T ss_dssp EEECHHHHHHHHHHHHHHHCCCBCHHH
T ss_pred EEECHHHHHHHHHHHHHHCCCEEehhH
Confidence 999999999999999999999999986
No 2
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=100.00 E-value=6.8e-63 Score=453.15 Aligned_cols=268 Identities=66% Similarity=1.116 Sum_probs=252.9
Q ss_pred hhhhHHHhhccCCCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHH
Q 024040 5 CEIKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGL 84 (273)
Q Consensus 5 ~~~~~~i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~ 84 (273)
+++++++.+++++|||++++++++.+|.+||+|+|++|||||||+|++.+++.+++++|.+.||..+||++|+||||+|+
T Consensus 111 ~~~~~~i~~~ig~TPLv~l~~Ls~~~g~~I~lK~E~lnptGSfKdRgA~~~i~~A~~~G~l~~g~~~VV~aSsGNhG~Al 190 (430)
T 4aec_A 111 LNIADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVKDRIGYSMVTDAEQKGFISPGKSVLVEPTSGNTGIGL 190 (430)
T ss_dssp CSCBSSGGGGSSCCCEEECCGGGTTCSSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHHHH
T ss_pred cchhhhhhccCCCCCeEEChhhhhhcCCeEEEEECCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCcEEEEECCCHHHHHH
Confidence 45678899999999999999999988999999999999999999999999999999999999987779999999999999
Q ss_pred HHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCCCCCCcchHhhhhchH
Q 024040 85 AFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTG 164 (273)
Q Consensus 85 A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~ 164 (273)
|++|+++|++|+||||++++..|+++++.+||+|+.++...+++++.+.+++++++.++++|++||+||.++.+||.|++
T Consensus 191 A~aAa~~Gl~~~IvmP~~~s~~k~~~~r~~GAeVv~v~~~~~~~~a~~~a~el~~~~~~~~~i~~~~np~~~~aG~~T~a 270 (430)
T 4aec_A 191 AFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYETTG 270 (430)
T ss_dssp HHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHSTTEEECCTTTCTHHHHHHHHTHH
T ss_pred HHHHHHhCCEEEEEEcCCCCHHHHHHHHHCCCEEEEECCCCChHHHHHHHHHHHHhcCCcEEecCCCCccHHHHHHHHHH
Confidence 99999999999999999999999999999999999998655688999999999988778999999999999768999999
Q ss_pred HHHHHhhCCCcCEEEEecCCCccHHHHHHHHHhhCCCcEEEEEecCCCccccCCCCCCccccccCCCCCcccccccCCCe
Q 024040 165 PEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLDE 244 (273)
Q Consensus 165 ~Ei~~q~~~~~d~iv~p~G~Gg~~~Gi~~~~k~~~~~~~vigVe~~~~~~~~~~~~~~~~~~glg~~~~~~~~~~~~~d~ 244 (273)
.||++|+++.||+||+|+|+||+++|++.++|+.+|+++||||||++++.+..+++.++.+++|+.+..|+.+..+++|+
T Consensus 271 ~EI~eQl~~~~D~vVvpvG~GGtlaGi~~~lk~~~p~~kVigVep~~s~~l~~g~~~~~~i~Gl~~~~~p~~l~~~~vd~ 350 (430)
T 4aec_A 271 PEIWDDTKGKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVIGVEPTESDILSGGKPGPHKIQGIGAGFIPKNLDQKIMDE 350 (430)
T ss_dssp HHHHHHTTSCEEEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGGGCGGGTCCCCCCSCTTSCCSSCCTTCCTTTCSE
T ss_pred HHHHHHcCCCCCEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEEeCCCcHhhCCCccceeehhccCCCCcHHHHHHhCCe
Confidence 99999997789999999999999999999999999999999999999999888888888889999987788888899999
Q ss_pred EEEeCHHHHHHHHHHHHHHcCceecccC
Q 024040 245 VITVSSEEAIETSKLLALKEGLLRQLLY 272 (273)
Q Consensus 245 ~v~v~d~e~~~a~~~l~~~eGi~~~ps~ 272 (273)
++.|+|+|+++++++|+++||+++||++
T Consensus 351 ~v~Vsd~ea~~a~r~La~~eGi~vepss 378 (430)
T 4aec_A 351 VIAISSEEAIETAKQLALKEGLMVGISS 378 (430)
T ss_dssp EEEECHHHHHHHHHHHHHHHCCCBCHHH
T ss_pred EEEECHHHHHHHHHHHHHHCCCEEehHH
Confidence 9999999999999999999999999985
No 3
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=100.00 E-value=1.2e-62 Score=441.52 Aligned_cols=268 Identities=44% Similarity=0.783 Sum_probs=250.2
Q ss_pred hhhhhHHHhhccCCCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHH
Q 024040 4 KCEIKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIG 83 (273)
Q Consensus 4 ~~~~~~~i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a 83 (273)
+..+++++...+++|||++++++ +.+|.+||+|+|++|||||||+|++.+++.++.++|.+.+|.+.||++|+||||+|
T Consensus 8 i~~~~~~i~~~ig~TPL~~l~~l-~~~g~~i~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~l~~g~~vvv~aSsGN~g~a 86 (334)
T 3tbh_A 8 SKNVAQSIDQLIGQTPALYLNKL-NNTKAKVVLKMECENPMASVKDRLGFAIYDKAEKEGKLIPGKSIVVESSSGNTGVS 86 (334)
T ss_dssp TTSCCSSGGGGSSCCCEEECCTT-CCSSSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHHH
T ss_pred HHHHHHHHHHhcCCCCeEECCcc-cCCCCEEEEEeCCCCCccCcHHHHHHHHHHHHHHcCCCCCCCeEEEEeCCCHHHHH
Confidence 34577889999999999999999 77889999999999999999999999999999999998888663599999999999
Q ss_pred HHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCCCCCCcchHhhhhch
Q 024040 84 LAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETT 163 (273)
Q Consensus 84 ~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~ 163 (273)
+|++|+++|++|+||||++++..|+++++.+||+|+.++...+++++.+.+++++++.++++|++||+||.|+..||.|+
T Consensus 87 lA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~~~~~~i~~~~np~n~~~g~~t~ 166 (334)
T 3tbh_A 87 LAHLGAIRGYKVIITMPESMSLERRCLLRIFGAEVILTPAALGMKGAVAMAKKIVAANPNAVLADQFATKYNALIHEETT 166 (334)
T ss_dssp HHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTEEECCTTTCHHHHHHHHHTH
T ss_pred HHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCchHHHHHHHHHHHhCCCEEECCccCChhHHHHHHHHH
Confidence 99999999999999999999999999999999999999865558899999999988876899999999999887899999
Q ss_pred HHHHHHhhCCCcCEEEEecCCCccHHHHHHHHHhhCCCcEEEEEecCCCccccCCCCCCccccccCCCCCcccccccCCC
Q 024040 164 GPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLD 243 (273)
Q Consensus 164 ~~Ei~~q~~~~~d~iv~p~G~Gg~~~Gi~~~~k~~~~~~~vigVe~~~~~~~~~~~~~~~~~~glg~~~~~~~~~~~~~d 243 (273)
++||++|+++.||+||+|+|+||+++|++.++|+.+|++|||||||++++++..+++.++.+++++.+..|+.+.++++|
T Consensus 167 ~~Ei~~q~~~~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigVe~~~~~~~~~g~~~~~~~~gi~~~~~~~~~~~~~~d 246 (334)
T 3tbh_A 167 GPEIWEQTNHNVDCFIAGVGTGGTLTGVARALKKMGSHARIVAVEPTESPVLSGGKPGPHKIQGIGPGFVPDVLDRSLID 246 (334)
T ss_dssp HHHHHHHTTSCCSEEEEECSSSHHHHHHHHHHHHTTCCCEEEEEEETTSCTTTTCCCCCCSCTTSCCSSCCTTCCGGGCS
T ss_pred HHHHHHHhCCCCCEEEeccCCcHhHHHHHHHHHHhCCCCEEEEEeeCCchHhhCCCcCCeecCCCCCCcCCHHHHHHhCC
Confidence 99999999778999999999999999999999999999999999999999888777777788899988888888889999
Q ss_pred eEEEeCHHHHHHHHHHHHHHcCceecccC
Q 024040 244 EVITVSSEEAIETSKLLALKEGLLRQLLY 272 (273)
Q Consensus 244 ~~v~v~d~e~~~a~~~l~~~eGi~~~ps~ 272 (273)
+++.|+|+|+++++++|+++||+++|||+
T Consensus 247 ~~~~V~d~e~~~a~~~l~~~egi~~epss 275 (334)
T 3tbh_A 247 EVLCVAGDDAIETALKLTRSDGVFCGFSG 275 (334)
T ss_dssp EEEEECHHHHHHHHHHHHHHHCCCBCHHH
T ss_pred EEEEECHHHHHHHHHHHHHHcCeEEcHHH
Confidence 99999999999999999999999999985
No 4
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=100.00 E-value=5.8e-62 Score=435.33 Aligned_cols=267 Identities=68% Similarity=1.146 Sum_probs=248.5
Q ss_pred hhhHHHhhccCCCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHH
Q 024040 6 EIKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLA 85 (273)
Q Consensus 6 ~~~~~i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A 85 (273)
.+++++.+.+++|||+++++|++..|.+||+|+|++|||||||||++.+++.++.++|.+.|+..+||++|+||||+|+|
T Consensus 4 ~~~~~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~G~~~~~~~~vv~assGN~g~alA 83 (322)
T 1z7w_A 4 RIAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLA 83 (322)
T ss_dssp CCCSSGGGGSSCCCEEECCGGGTTCSSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHHHHH
T ss_pred hhhhHHHHhcCCCCeEECccccccCCceEEEEecccCCCCchHHHHHHHHHHHHHHcCCCCCCCCEEEEeCCCHHHHHHH
Confidence 46788999999999999999998888999999999999999999999999999999999888865699999999999999
Q ss_pred HHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCCCCCCcchHhhhhchHH
Q 024040 86 FIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGP 165 (273)
Q Consensus 86 ~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~ 165 (273)
++|+++|++|+||||++++..|+++++.+||+|+.+++..+++++.+.+++++++.++++|++||+||.++..||.|+++
T Consensus 84 ~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~~~~~~i~~~~n~~~~~~g~~t~~~ 163 (322)
T 1z7w_A 84 FTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGP 163 (322)
T ss_dssp HHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTEEECCTTTCTHHHHHHHHTHHH
T ss_pred HHHHHcCCCEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCCHHHHHHHHHHHHHhCCCeEeCCCCCChhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999986545788999999999887689999999999998779999999
Q ss_pred HHHHhhCCCcCEEEEecCCCccHHHHHHHHHhhCCCcEEEEEecCCCccccCCCCCCccccccCCCCCcccccccCCCeE
Q 024040 166 EIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLDEV 245 (273)
Q Consensus 166 Ei~~q~~~~~d~iv~p~G~Gg~~~Gi~~~~k~~~~~~~vigVe~~~~~~~~~~~~~~~~~~glg~~~~~~~~~~~~~d~~ 245 (273)
||++|++++||+||+|+|+||+++|++.++|+.+|.+||++|||++++.+..+++.+..+++++.+..|+.+..+++|++
T Consensus 164 Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~ 243 (322)
T 1z7w_A 164 EIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEPVESAILSGGKPGPHKIQGIGAGFIPSVLNVDLIDEV 243 (322)
T ss_dssp HHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCGGGTCCCCCCSCTTSCCSSCCTTCCGGGCSEE
T ss_pred HHHHHhcCCCCEEEEecCccHhHHHHHHHHHHcCCCCEEEEEecCCCccccCCCCCCcccCcCcCCCCChhhhHHhCCEE
Confidence 99999976899999999999999999999999999999999999999888777666667889988877878888899999
Q ss_pred EEeCHHHHHHHHHHHHHHcCceecccC
Q 024040 246 ITVSSEEAIETSKLLALKEGLLRQLLY 272 (273)
Q Consensus 246 v~v~d~e~~~a~~~l~~~eGi~~~ps~ 272 (273)
+.|+|+|+++++++|++++|+++||+|
T Consensus 244 ~~V~d~e~~~a~~~l~~~~gi~~~pss 270 (322)
T 1z7w_A 244 VQVSSDESIDMARQLALKEGLLVGISS 270 (322)
T ss_dssp EEECHHHHHHHHHHHHHHHSCCBCHHH
T ss_pred EEECHHHHHHHHHHHHHHcCceEchhH
Confidence 999999999999999999999999986
No 5
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=100.00 E-value=4.3e-61 Score=430.01 Aligned_cols=259 Identities=36% Similarity=0.579 Sum_probs=240.2
Q ss_pred hhhhHHHhhccCCCcceecccccCC-------CCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCC
Q 024040 5 CEIKKDVTELIGHTPMVYLNNVVDG-------CVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTS 77 (273)
Q Consensus 5 ~~~~~~i~~~~~~TPl~~~~~l~~~-------~g~~l~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ss 77 (273)
+.+++++...+++|||+++++|++. .|.+||+|+|++|||||||+|++.+++.++.++|.+.|+.+ ||++|+
T Consensus 3 ~~~~~~i~~~ig~TPL~~~~~l~~~~~~~~~~~g~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~g~l~~~~~-vv~aSs 81 (325)
T 3dwg_A 3 MTRYDSLLQALGNTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGAT-ILEPTS 81 (325)
T ss_dssp CCEESSTGGGCSCCCEEECTTTSSBSSCBTTBCCEEEEEEETTSSTTSBTTHHHHHHHHHHHHHTTCCCTTCE-EEEECS
T ss_pred cccccCHHHhcCCCCcEEccccchhhcccccCCCcEEEEEECCCCCCCChHHHHHHHHHHHHHHcCCCCCCCE-EEEeCC
Confidence 4577889999999999999999987 67899999999999999999999999999999998888765 999999
Q ss_pred ChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCCCCCCcchH
Q 024040 78 GNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPE 157 (273)
Q Consensus 78 GN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 157 (273)
||||+|+|++|+++|++|+||||++++..|+++++.+||+|+.++...+++++.+.+++++++.++++|++||+||.++.
T Consensus 82 GN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~np~~~~ 161 (325)
T 3dwg_A 82 GNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQYGNPANTD 161 (325)
T ss_dssp SHHHHHHHHHHHHHTCEEEEEEESSSCHHHHHHHHHHTCEEEEECSTTTHHHHHHHHHHHHHHCTTSBCCCTTTCHHHHH
T ss_pred cHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEeCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999976678999999999998876689999999999987
Q ss_pred hhhhchHHHHHHhhCCCcCEEEEecCCCccHHHHHHHHHhhCCCcEEEEEecCCCccccCCCCCCccccccCCCCCcccc
Q 024040 158 IHYETTGPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVL 237 (273)
Q Consensus 158 ~g~~t~~~Ei~~q~~~~~d~iv~p~G~Gg~~~Gi~~~~k~~~~~~~vigVe~~~~~~~~~~~~~~~~~~glg~~~~~~~~ 237 (273)
.||.|+++||++|++. ||+||+|+|+||+++|++.++|+.+|++|||+|||++++.+. .+++++.+..|+.+
T Consensus 162 ~g~~t~~~Ei~~q~~~-~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigVe~~~~~~~~-------~~~~i~~~~~~~~~ 233 (325)
T 3dwg_A 162 SHYCGTGPELLADLPE-ITHFVAGLGTTGTLMGTGRFLREHVANVKIVAAEPRYGEGVY-------ALRNMDEGFVPELY 233 (325)
T ss_dssp HHHHTHHHHHHHHCTT-CCEEEEECSSSHHHHHHHHHHHHHSTTCEEEEEEEECCGGGG-------CCSSGGGCCCCTTC
T ss_pred HHHHHHHHHHHHhcCC-CCEEEEecCchHHHHHHHHHHHHhCCCCEEEEEeeCCCcchh-------ccCcccCCcCcccc
Confidence 7999999999999964 999999999999999999999999999999999999998763 24567766677788
Q ss_pred cccCCCeEEEeCHHHHHHHHHHHHHHcCceecccC
Q 024040 238 DVAMLDEVITVSSEEAIETSKLLALKEGLLRQLLY 272 (273)
Q Consensus 238 ~~~~~d~~v~v~d~e~~~a~~~l~~~eGi~~~ps~ 272 (273)
.++++|+++.|+|+|+++++++|++++|+++|||+
T Consensus 234 ~~~~~d~~~~V~d~e~~~a~~~l~~~egi~~epss 268 (325)
T 3dwg_A 234 DPEILTARYSVGAVDAVRRTRELVHTEGIFAGIST 268 (325)
T ss_dssp CGGGCSEEEEEEHHHHHHHHHHHHHHHCCCBCHHH
T ss_pred cHhhCCeEEEECHHHHHHHHHHHHHHcCceechhH
Confidence 88999999999999999999999999999999985
No 6
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=100.00 E-value=1.1e-60 Score=425.50 Aligned_cols=267 Identities=50% Similarity=0.844 Sum_probs=245.5
Q ss_pred hhhhHHHhhccCCCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHH
Q 024040 5 CEIKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGL 84 (273)
Q Consensus 5 ~~~~~~i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~ 84 (273)
+.+++++...+++|||+++++|++..|.+||+|+|++|||||||+|++.+++.++.++|.+.|+.+ ||++|+||||+|+
T Consensus 4 ~~~~~~i~~~~~~TPL~~~~~l~~~~g~~i~~K~E~~~ptgSfK~R~a~~~l~~a~~~g~~~~g~~-vv~assGN~g~al 82 (313)
T 2q3b_A 4 MSIAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLIKPDTI-ILEPTSGNTGIAL 82 (313)
T ss_dssp CCCCSSGGGGSCCCCEEECSSSCTTCCSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCCTTCE-EEEECSSHHHHHH
T ss_pred cchhhhHHHhcCCCceEECcccccccCcEEEEEehhcCCCCcHHHHHHHHHHHHHHHcCCCCCCCE-EEEeCCCHHHHHH
Confidence 456788999999999999999998888999999999999999999999999999999998887755 9999999999999
Q ss_pred HHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCCCCCCcchHhhhhchH
Q 024040 85 AFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTG 164 (273)
Q Consensus 85 A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~ 164 (273)
|++|+++|++|+||||++++..|+++++.+||+|+.++...+++++.+.+++++++.+..+|+++|+||.++..||.|++
T Consensus 83 A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~n~~~~~~~~~t~~ 162 (313)
T 2q3b_A 83 AMVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGADGMSGAIAKAEELAKTDQRYFVPQQFENPANPAIHRVTTA 162 (313)
T ss_dssp HHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTEECCCTTTCTHHHHHHHHTHH
T ss_pred HHHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHHHHhCCCEEeCCCCCChhhHHHHHHHHH
Confidence 99999999999999999999999999999999999998654588999999999988755588999999999976799999
Q ss_pred HHHHHhhCCCcCEEEEecCCCccHHHHHHHHHhhCCCcEEEEEecCCCccccCCCCCCccccccCCCCCcccccccCCCe
Q 024040 165 PEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLDE 244 (273)
Q Consensus 165 ~Ei~~q~~~~~d~iv~p~G~Gg~~~Gi~~~~k~~~~~~~vigVe~~~~~~~~~~~~~~~~~~glg~~~~~~~~~~~~~d~ 244 (273)
+||++|+++++|+||+|+|+||+++|++.++|+.+|++|||+|||++++.+...+...+.+++++.+..|+.+....+|+
T Consensus 163 ~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~d~ 242 (313)
T 2q3b_A 163 EEVWRDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAVEPAASPVLSGGQKGPHPIQGIGAGFVPPVLDQDLVDE 242 (313)
T ss_dssp HHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTSCTTTTCCCCCCCCTTSCCSSCCTTCCGGGCCE
T ss_pred HHHHHHcCCCCCEEEEccCcchhHHHHHHHHHHhCCCCEEEEEeeCCCccccCCCCCCcccCCcCCCCCChhhhHhhccE
Confidence 99999997679999999999999999999999999999999999999988765555667788888877788788888999
Q ss_pred EEEeCHHHHHHHHHHHHHHcCceecccC
Q 024040 245 VITVSSEEAIETSKLLALKEGLLRQLLY 272 (273)
Q Consensus 245 ~v~v~d~e~~~a~~~l~~~eGi~~~ps~ 272 (273)
++.|+|+|+++++++|++++|+++|||+
T Consensus 243 ~~~v~d~e~~~a~~~l~~~~gi~~epss 270 (313)
T 2q3b_A 243 IITVGNEDALNVARRLAREEGLLVGISS 270 (313)
T ss_dssp EEEECHHHHHHHHHHHHHHHSCCBCHHH
T ss_pred EEEECHHHHHHHHHHHHHHcCceEchHH
Confidence 9999999999999999999999999975
No 7
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=100.00 E-value=1.2e-60 Score=425.78 Aligned_cols=263 Identities=46% Similarity=0.755 Sum_probs=239.4
Q ss_pred hhHHHhhccCCCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHH
Q 024040 7 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAF 86 (273)
Q Consensus 7 ~~~~i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~ 86 (273)
+++++.+.+++|||+++++| + .|.+||+|+|++|||||||||++.+++.++.++|.++|+. +||++|+||||+|+|+
T Consensus 3 ~~~~i~~~~~~TPL~~l~~l-~-~g~~i~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~~~~~~-~vv~~ssGN~g~a~A~ 79 (316)
T 1y7l_A 3 IYADNSYSIGNTPLVRLKHF-G-HNGNVVVKIEGRNPSYSVKCRIGANMVWQAEKDGTLTKGK-EIVDATSGNTGIALAY 79 (316)
T ss_dssp CCSSGGGGCCCCCEEECSSS-S-STTCEEEEETTSSGGGBTHHHHHHHHHHHHHHTTSSCTTC-EEEESCCSHHHHHHHH
T ss_pred chhhhHHhcCCCCcEECccC-C-CCCEEEEEeccCCCCCChHHHHHHHHHHHHHHcCCCCCCC-EEEEeCCcHHHHHHHH
Confidence 56789999999999999999 6 7899999999999999999999999999999999877764 4999999999999999
Q ss_pred HHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCe-EeeCCCCCCcchHhhhhchHH
Q 024040 87 IAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNG-YILGQFENPANPEIHYETTGP 165 (273)
Q Consensus 87 ~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~g~~t~~~ 165 (273)
+|+++|++|+||||++++..|+++|+.+||+|+.++++.+++++.+.+++++++.++. +|++||+||.++..||.|+++
T Consensus 80 ~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~ 159 (316)
T 1y7l_A 80 VAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKGMKGAIAKAEEIVASDPSRYVMLKQFENPANPQIHRETTGP 159 (316)
T ss_dssp HHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTTEECCCTTTCTHHHHHHHHTHHH
T ss_pred HHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCCCCHHHHHHHHHHHHHhCCCCEEECCCCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999986545889999999999887566 889999999998778999999
Q ss_pred HHHHhhCCCcCEEEEecCCCccHHHHHHHHHhhC-CCcEEEEEecCCCccccC---CC---CCCccccccCCCCCccccc
Q 024040 166 EIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKN-PNIKVYGIEPSESAVLNG---GQ---PGKHLIQGIGAGVIPPVLD 238 (273)
Q Consensus 166 Ei~~q~~~~~d~iv~p~G~Gg~~~Gi~~~~k~~~-~~~~vigVe~~~~~~~~~---~~---~~~~~~~glg~~~~~~~~~ 238 (273)
||++|+++.+|+||+|+|+||+++|++.++|+++ |.+|||+|||++++.+.. ++ ..++.+++++.+..|+.+.
T Consensus 160 Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~~~~~~~~~~~~g~~~~~~~~~~~gi~~~~~~~~~~ 239 (316)
T 1y7l_A 160 EIWKDTDGKVDVVVAGVGTGGSITGISRAIKLDFGKQITSVAVEPVESPVISQTLAGEEVKPGPHKIQGIGAGFIPKNLD 239 (316)
T ss_dssp HHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHTSCCCCEEEEEEETTSCHHHHHHHTCCCCCCCCSCTTSCCSSCCTTCC
T ss_pred HHHHHcCCCCCEEEEeCCccccHHHHHHHHHHhCCCCCEEEEEecCCCccccccccCCccCCCCcccCcCCCCCCCchhh
Confidence 9999997669999999999999999999999998 999999999999976542 22 2356678888877787888
Q ss_pred ccCCCeEEEeCHHHHHHHHHHHHHHcCceecccC
Q 024040 239 VAMLDEVITVSSEEAIETSKLLALKEGLLRQLLY 272 (273)
Q Consensus 239 ~~~~d~~v~v~d~e~~~a~~~l~~~eGi~~~ps~ 272 (273)
++++|+++.|+|+|+++++++|++++|+++|||+
T Consensus 240 ~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~epss 273 (316)
T 1y7l_A 240 LSIIDRVETVDSDTALATARRLMAEEGILAGISS 273 (316)
T ss_dssp GGGCCEEEEECHHHHHHHHHHHHHHHCCCBCHHH
T ss_pred HhhCCEEEEECHHHHHHHHHHHHHhhCCeEcHHH
Confidence 8899999999999999999999999999999986
No 8
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=100.00 E-value=4.1e-60 Score=420.20 Aligned_cols=261 Identities=48% Similarity=0.786 Sum_probs=239.9
Q ss_pred HhhccCCCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCC-eEEEeeCCChHHHHHHHHHH
Q 024040 11 VTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGK-TVLIELTSGNTGIGLAFIAA 89 (273)
Q Consensus 11 i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~g~-~~vv~~ssGN~g~a~A~~a~ 89 (273)
+...+++|||+++++|++.+|.+||+|+|++|||||||+|++.+++.++.++|.+.|+. .+||++|+||||+|+|++|+
T Consensus 3 i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~g~~~~g~~~~vv~assGN~g~a~A~~a~ 82 (304)
T 1ve1_A 3 VEGAIGKTPVVRLAKVVEPDMAEVWVKLEGLNPGGSIKDRPAWYMIKDAEERGILRPGSGQVIVEPTSGNTGIGLAMIAA 82 (304)
T ss_dssp GGGGCCCCCEEECCSSSCTTSCEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTSCCTTSCCEEEESCCSHHHHHHHHHHH
T ss_pred hHHhcCCCCcEECcccccccCCEEEEEecccCCCCcHHHHHHHHHHHHHHHcCCCCCCCccEEEEeCCcHHHHHHHHHHH
Confidence 56789999999999999888899999999999999999999999999999999877765 04999999999999999999
Q ss_pred HcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCCCCCCcchHhhhhchHHHHHH
Q 024040 90 SRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWN 169 (273)
Q Consensus 90 ~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~ 169 (273)
++|++|+||||++++..|+++++.+||+|+.++...+++++.+.+++++++ ++++|+++|+||.++..||.|+++||++
T Consensus 83 ~~G~~~~i~~p~~~~~~k~~~~~~~Ga~V~~~~~~~~~~~~~~~a~~l~~~-~~~~~~~~~~n~~~~~g~~~t~~~Ei~~ 161 (304)
T 1ve1_A 83 SRGYRLILTMPAQMSEERKRVLKAFGAELVLTDPERRMLAAREEALRLKEE-LGAFMPDQFKNPANVRAHYETTGPELYE 161 (304)
T ss_dssp HHTCEEEEEEETTCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHH-HTCBCCCTTTCHHHHHHHHHTHHHHHHH
T ss_pred HcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHhc-CCCEeCCCCCChhHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999754588999999999887 4788999999999996447999999999
Q ss_pred hhCCCcCEEEEecCCCccHHHHHHHHHhhCCCcEEEEEecCCCccccCCCCCCccccccCCCCCcccccccCCCeEEEeC
Q 024040 170 DSGGKVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLDEVITVS 249 (273)
Q Consensus 170 q~~~~~d~iv~p~G~Gg~~~Gi~~~~k~~~~~~~vigVe~~~~~~~~~~~~~~~~~~glg~~~~~~~~~~~~~d~~v~v~ 249 (273)
|+++.+|+||+|+|+||+++|++.++|+.+|.+|||+|||++++.+..+++.++.+++++.+..|+.+.+.++|+++.|+
T Consensus 162 q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~~~~~~~~~g~~~~~~~~gl~~~~~~~~~~~~~~d~~~~V~ 241 (304)
T 1ve1_A 162 ALEGRIDAFVYGSGTGGTITGVGRYLKERIPHVKVIAVEPARSNVLSGGKMGQHGFQGMGPGFIPENLDLSLLDGVIQVW 241 (304)
T ss_dssp HTTTCCSEEEEECSSSHHHHHHHHHHHTTCTTCEEEEEEEGGGCTTTTCCCCCCSCTTSCCSSCCTTCCGGGCSEEEEEC
T ss_pred HcCCCCCEEEEecCCchhHHHHHHHHHHhCCCCEEEEEecCCCccccCCCCCCcccCCCCCCCCChhhhhhhCCEEEEEC
Confidence 99767999999999999999999999999999999999999998877666666677899888778888888999999999
Q ss_pred HHHHHHHHHHHHHHcCceecccC
Q 024040 250 SEEAIETSKLLALKEGLLRQLLY 272 (273)
Q Consensus 250 d~e~~~a~~~l~~~eGi~~~ps~ 272 (273)
|+|+++++++|++++|+++|||+
T Consensus 242 d~e~~~a~~~l~~~~gi~~epss 264 (304)
T 1ve1_A 242 EEDAFPLARRLAREEGLFLGMSS 264 (304)
T ss_dssp HHHHHHHHHHHHHHHCCCBCHHH
T ss_pred HHHHHHHHHHHHHHhCcEEcHHH
Confidence 99999999999999999999985
No 9
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=100.00 E-value=6.3e-60 Score=418.80 Aligned_cols=255 Identities=41% Similarity=0.702 Sum_probs=234.9
Q ss_pred HHHhhccCCCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHH
Q 024040 9 KDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIA 88 (273)
Q Consensus 9 ~~i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a 88 (273)
+++...+++|||+++++|++..|.+||+|+|++|||||||||++.+++.++.++|.++|+. +||++|+||||+|+|++|
T Consensus 2 ~~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~~~~g~-~vv~~ssGN~g~a~A~~a 80 (303)
T 2v03_A 2 STLEQTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPGD-VLIEATSGNTGIALAMIA 80 (303)
T ss_dssp CSGGGGSSCCCEEECSSSSCSSSCEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCCTTC-EEEEECSSHHHHHHHHHH
T ss_pred cchHhhcCCCCcEECcccccccCCEEEEEeccCCCCCCcHHHHHHHHHHHHHHcCCCCCCC-EEEEECCcHHHHHHHHHH
Confidence 4678899999999999999988999999999999999999999999999999999887775 499999999999999999
Q ss_pred HHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCCCCCCcchHhhhhchHHHHH
Q 024040 89 ASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIW 168 (273)
Q Consensus 89 ~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~ 168 (273)
+++|++|+||||++++..|+++++.+||+|+.++...+++++.+.+++++++.+++ |++||+||.++..||.|+++||+
T Consensus 81 ~~~G~~~~iv~p~~~~~~k~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~n~~~~~~g~~t~~~Ei~ 159 (303)
T 2v03_A 81 ALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANRGEGK-LLDQFNNPDNPYAHYTTTGPEIW 159 (303)
T ss_dssp HHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHTTSCE-ECCTTTCTHHHHHHHHTHHHHHH
T ss_pred HHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCc-ccCCcCChhhHHHhcCCcHHHHH
Confidence 99999999999999999999999999999999997556899999999998885467 99999999998779999999999
Q ss_pred HhhCCCcCEEEEecCCCccHHHHHHHHHhhCCCcEEEEEecCCCccccCCCCCCccccccCCCCCcccccccCCCeEEEe
Q 024040 169 NDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLDEVITV 248 (273)
Q Consensus 169 ~q~~~~~d~iv~p~G~Gg~~~Gi~~~~k~~~~~~~vigVe~~~~~~~~~~~~~~~~~~glg~~~~~~~~~~~~~d~~v~v 248 (273)
+|+++.+|+||+|+|+||+++|++.++|+.+|.+|||+|||++++++.. +++++.+..|+.+.++++|+++.|
T Consensus 160 ~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~~~~~~~-------~~gl~~~~~~~~~~~~~~d~~~~V 232 (303)
T 2v03_A 160 QQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPEEGSSIPG-------IRRWPTEYLPGIFNASLVDEVLDI 232 (303)
T ss_dssp HHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEEECTTCCCTT-------CCCCCGGGCCTTCCGGGCSEEEEE
T ss_pred HHhCCCCCEEEEEeCccHhHHHHHHHHHHhCCCCEEEEEcCCCCccccc-------CCcCCCCCCCcccchHHCCEEEEE
Confidence 9997679999999999999999999999999999999999999987653 566766666777778889999999
Q ss_pred CHHHHHHHHHHHHHHcCceecccC
Q 024040 249 SSEEAIETSKLLALKEGLLRQLLY 272 (273)
Q Consensus 249 ~d~e~~~a~~~l~~~eGi~~~ps~ 272 (273)
+|+|+++++++|++++|+++|||+
T Consensus 233 ~d~e~~~a~~~l~~~~gi~~~pss 256 (303)
T 2v03_A 233 HQRDAENTMRELAVREGIFCGVSS 256 (303)
T ss_dssp CHHHHHHHHHHHHHHHCCCBCHHH
T ss_pred CHHHHHHHHHHHHHHcCceEcHHH
Confidence 999999999999999999999985
No 10
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=100.00 E-value=1.6e-60 Score=423.53 Aligned_cols=264 Identities=52% Similarity=0.842 Sum_probs=212.7
Q ss_pred hhHHHhhccCCCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHH
Q 024040 7 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAF 86 (273)
Q Consensus 7 ~~~~i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~ 86 (273)
+++++...+++|||+++++|++.+|.+||+|+|++|||||||+|++.+++.++.++|.+.++.+ ||++|+||||+|+|+
T Consensus 4 ~~~~i~~~~~~TPL~~l~~l~~~~g~~i~~K~E~~~ptgSfK~R~a~~~l~~a~~~g~~~~g~~-vv~assGN~g~a~A~ 82 (308)
T 2egu_A 4 TVNSITELIGDTPAVKLNRIVDEDSADVYLKLEFMNPGSSVKDRIALAMIEAAEKAGKLKPGDT-IVEPTSGNTGIGLAM 82 (308)
T ss_dssp CCSCGGGGSSCCCEEECCSSSCTTSCEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCCTTCE-EEEECCHHHHHHHHH
T ss_pred HHHHHHHhcCCCCeEECCcccccCCCEEEEEecccCCCCChHHHHHHHHHHHHHHcCCCCCCCE-EEEeCCCHHHHHHHH
Confidence 5678999999999999999998889999999999999999999999999999999998777654 999999999999999
Q ss_pred HHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCCCCCCcchHhhhhchHHH
Q 024040 87 IAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPE 166 (273)
Q Consensus 87 ~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~E 166 (273)
+|+++|++|+||||++++..|+++++.+||+|+.++...+++++.+.+++++++. +++++++|+||.++..||.|+++|
T Consensus 83 ~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~l~~~~-~~~~~~~~~n~~~~~~g~~t~~~E 161 (308)
T 2egu_A 83 VAAAKGYKAVLVMPDTMSLERRNLLRAYGAELVLTPGAQGMRGAIAKAEELVREH-GYFMPQQFKNEANPEIHRLTTGKE 161 (308)
T ss_dssp HHHHHTCEEEEEEESCSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHH-CCBCC--------------CHHHH
T ss_pred HHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHHC-cCCcCCcCCChhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999986545788999999998887 458889999999886799999999
Q ss_pred HHHhhCCCcCEEEEecCCCccHHHHHHHHHhhCCCcEEEEEecCCCccccCCCCCCccccccCCCCCcccccccCCCeEE
Q 024040 167 IWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLDEVI 246 (273)
Q Consensus 167 i~~q~~~~~d~iv~p~G~Gg~~~Gi~~~~k~~~~~~~vigVe~~~~~~~~~~~~~~~~~~glg~~~~~~~~~~~~~d~~v 246 (273)
|++|+++.+|+||+|+|+||+++|++.++|+.+|++|||+|||++++.+..++..++.+++++.+..|+.+...++|+++
T Consensus 162 i~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigve~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~ 241 (308)
T 2egu_A 162 IVEQMGDQLDAFVAGVGTGGTITGAGKVLREAYPNIKIYAVEPADSPVLSGGKPGPHKIQGIGAGFVPDILDTSIYDGVI 241 (308)
T ss_dssp HHHHHTTCCCEEEEEGGGTHHHHHHHHHHHHHCTTCEEEEEEECC-----------------------CCCCCCSCSEEE
T ss_pred HHHHcCCCCCEEEEeeCCchhHHHHHHHHHHhCCCCEEEEEEeCCCccccCCCCCCcccCccCCCCCCHhHHHHhcCeEE
Confidence 99999767999999999999999999999999999999999999998777655556677888887667777788999999
Q ss_pred EeCHHHHHHHHHHHHHHcCceecccC
Q 024040 247 TVSSEEAIETSKLLALKEGLLRQLLY 272 (273)
Q Consensus 247 ~v~d~e~~~a~~~l~~~eGi~~~ps~ 272 (273)
.|+|+|+.+++++|++++|+++|||+
T Consensus 242 ~v~d~e~~~a~~~l~~~~gi~~epss 267 (308)
T 2egu_A 242 TVTTEEAFAAARRAAREEGILGGISS 267 (308)
T ss_dssp EECHHHHHHHHHHHHHHHCCCBCHHH
T ss_pred EECHHHHHHHHHHHHHHhCceEcHHH
Confidence 99999999999999999999999975
No 11
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=100.00 E-value=3.1e-60 Score=427.37 Aligned_cols=265 Identities=40% Similarity=0.676 Sum_probs=244.2
Q ss_pred hhhHHHhhccCCCcceecccccC----CCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHH
Q 024040 6 EIKKDVTELIGHTPMVYLNNVVD----GCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTG 81 (273)
Q Consensus 6 ~~~~~i~~~~~~TPl~~~~~l~~----~~g~~l~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g 81 (273)
.+++++.+.+++|||+++++|++ ..|.+||+|+|++|||||||||++.+++.++.++|.++++.+ ||++|+||||
T Consensus 12 ~~~~~i~~~~g~TPL~~~~~l~~~~~~~~g~~v~~K~E~~~ptGSfKdR~a~~~l~~a~~~g~~~~g~~-vv~aSsGN~g 90 (343)
T 2pqm_A 12 RIYHNILETIGGTPLVELHGVTEHPRIKKGTRILVKLEYFNPMSSVKDRVGFNIVYQAIKDGRLKPGME-IIESTSGNTG 90 (343)
T ss_dssp CEESSGGGGSSCCCEEECCGGGCSTTSCTTCEEEEEEGGGSTTSBTHHHHHHHHHHHHHHHTSSCTTCE-EEEECSSHHH
T ss_pred hHHHHHHhhcCCCCeEECCccccccccccCcEEEEEeccCCCCCChHHHHHHHHHHHHHHcCCCCCCCE-EEEECCcHHH
Confidence 45678999999999999999988 778999999999999999999999999999999998888754 9999999999
Q ss_pred HHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCe-EeeCCCCCCcchHhhh
Q 024040 82 IGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNG-YILGQFENPANPEIHY 160 (273)
Q Consensus 82 ~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~g~ 160 (273)
+|+|++|+++|++|+||||++++..|+++++.+||+|+.+++..+++++.+.+++++++.+.. ++++||+||.++..||
T Consensus 91 ~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~~~~~n~~n~~~g~ 170 (343)
T 2pqm_A 91 IALCQAGAVFGYRVNIAMPSTMSVERQMIMKAFGAELILTEGKKGMPGAIEEVNKMIKENPGKYFVANQFGNPDNTAAHH 170 (343)
T ss_dssp HHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHSTTTEEECCTTTCHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCcEEECCCCCChhHHHHHH
Confidence 999999999999999999999999999999999999999986545788999999999887555 7789999999887899
Q ss_pred hchHHHHHHhhCCCcCEEEEecCCCccHHHHHHHHHhhCCCcEEEEEecCCCccccCCCCCCccccccCCCCCccccccc
Q 024040 161 ETTGPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVA 240 (273)
Q Consensus 161 ~t~~~Ei~~q~~~~~d~iv~p~G~Gg~~~Gi~~~~k~~~~~~~vigVe~~~~~~~~~~~~~~~~~~glg~~~~~~~~~~~ 240 (273)
.|++ ||++|+++.+|+||+|+|+||+++|++.++|+.+|++|||+|||++++.+..++..++.+++++.+..|+.+...
T Consensus 171 ~t~~-Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigVe~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~ 249 (343)
T 2pqm_A 171 YTAN-EIWEDTDGEVDIVVSAVGTSGTVIGVAEKLKEKKKGIKIIAVEPEESAVLEGKAKGPHGIQGIGAGFIPDIYKKE 249 (343)
T ss_dssp HHHH-HHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCTTTTCCCCCCCCTTCCCSSCCTTCCGG
T ss_pred HHHH-HHHHHcCCCCCEEEEecCCchhHHHHHHHHHHcCCCCEEEEEecCCCcccccCCCCCeecCccCCCCCCHHHHHH
Confidence 9999 999999767999999999999999999999999999999999999998877666666778899887778888888
Q ss_pred CCCeEEEeCHHHHHHHHHHHHHHcCceecccC
Q 024040 241 MLDEVITVSSEEAIETSKLLALKEGLLRQLLY 272 (273)
Q Consensus 241 ~~d~~v~v~d~e~~~a~~~l~~~eGi~~~ps~ 272 (273)
++|+++.|+|+|+++++++|++++|+++|||+
T Consensus 250 ~~d~~~~Vsd~e~~~a~~~l~~~~gi~~epss 281 (343)
T 2pqm_A 250 FVDEIIPIKTQDAWKMARAVVKYDGIMCGMSS 281 (343)
T ss_dssp GCCEEEEECHHHHHHHHHHHHHHHCCCBCHHH
T ss_pred hCCeEEEECHHHHHHHHHHHHHHhCCeEchhH
Confidence 99999999999999999999999999999986
No 12
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=100.00 E-value=4e-59 Score=413.67 Aligned_cols=258 Identities=50% Similarity=0.760 Sum_probs=236.0
Q ss_pred hhHHHhhccCCCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHH
Q 024040 7 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAF 86 (273)
Q Consensus 7 ~~~~i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~ 86 (273)
-|+.+.+.+++|||+++++++ .+||+|+|++|||||||+|++.+++.+++++|.+.++ ||++|+||||+|+|+
T Consensus 10 ~~~~~~~~~~~TPL~~l~~l~----~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~g~~~~~---vv~aSsGN~g~a~A~ 82 (303)
T 1o58_A 10 HHHMMERLIGSTPIVRLDSID----SRIFLKLEKNNPGGSVKDRPALFMILDAEKRGLLKNG---IVEPTSGNMGIAIAM 82 (303)
T ss_dssp -CCHHHHHSCCCCEEECTTTC----TTEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTCCTTC---EEEECSSHHHHHHHH
T ss_pred hhhhhhhccCCCCeEECccCC----ceEEEEecCCCCCCChHHHHHHHHHHHHHHcCCCCCC---EEEECchHHHHHHHH
Confidence 344578899999999999886 5899999999999999999999999999998876554 999999999999999
Q ss_pred HHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCCCCCCcchHhhhhchHHH
Q 024040 87 IAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPE 166 (273)
Q Consensus 87 ~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~E 166 (273)
+|+++|++|+||||++++..|+++++.+||+|+.++++.+|+++.+.+++++++. +++|++||+||.++..||.|+++|
T Consensus 83 aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~n~~~~~~g~~t~~~E 161 (303)
T 1o58_A 83 IGAKRGHRVILTMPETMSVERRKVLKMLGAELVLTPGELGMKGAVEKALEISRET-GAHMLNQFENPYNVYSHQFTTGPE 161 (303)
T ss_dssp HHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHH-CCBCCCTTTCHHHHHHHHHTHHHH
T ss_pred HHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhc-CeEeCCCCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999986545889999999998886 678899999999987789999999
Q ss_pred HHHhhCCCcCEEEEecCCCccHHHHHHHHHhhCCC-cEEEEEecCCCccccCCCCCCccccccCCCCCcccccccCCCeE
Q 024040 167 IWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNPN-IKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLDEV 245 (273)
Q Consensus 167 i~~q~~~~~d~iv~p~G~Gg~~~Gi~~~~k~~~~~-~~vigVe~~~~~~~~~~~~~~~~~~glg~~~~~~~~~~~~~d~~ 245 (273)
|++|+++.||+||+|+|+||+++|++.++|+.+|+ +|||+|||++++.+..+++.++.+++++.+..|+.+...++|++
T Consensus 162 i~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~~vigve~~~~~~~~~g~~~~~~~~gi~~~~~~~~~~~~~~d~~ 241 (303)
T 1o58_A 162 ILKQMDYQIDAFVAGVGTGGTISGVGRVLKGFFGNGVKIVAVEPAKSPVLSGGQPGKHAIQGIGAGFVPKILDRSVIDEV 241 (303)
T ss_dssp HHHHTTTCCSEEEEECSSSHHHHHHHHHHHHHHGGGSEEEEEEETTSCTTTTCCCCCCCCTTSCCSSCCTTCCGGGCCEE
T ss_pred HHHHcCCCCCEEEEeeCCcccHHHHHHHHHHhCCCCCEEEEEecCCCccccCCCCCCeecCcCCCCCcCHHHHHHhCCeE
Confidence 99999766999999999999999999999999999 99999999999888777766777889988777777888889999
Q ss_pred EEeCHHHHHHHHHHHHHHcCceecccC
Q 024040 246 ITVSSEEAIETSKLLALKEGLLRQLLY 272 (273)
Q Consensus 246 v~v~d~e~~~a~~~l~~~eGi~~~ps~ 272 (273)
+.|+|+|+++++++|++++|+++|||+
T Consensus 242 ~~V~d~e~~~a~~~l~~~~gi~~epss 268 (303)
T 1o58_A 242 ITVEDEEAYEMARYLAKKEGLLVGISS 268 (303)
T ss_dssp EEECHHHHHHHHHHHHHHHCCCBCHHH
T ss_pred EEECHHHHHHHHHHHHHHcCceEcHHH
Confidence 999999999999999999999999985
No 13
>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*
Probab=100.00 E-value=3.3e-57 Score=417.37 Aligned_cols=266 Identities=42% Similarity=0.637 Sum_probs=234.5
Q ss_pred hhhHHHhhccCCCcceecccccCCCC--ceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHH
Q 024040 6 EIKKDVTELIGHTPMVYLNNVVDGCV--ARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIG 83 (273)
Q Consensus 6 ~~~~~i~~~~~~TPl~~~~~l~~~~g--~~l~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a 83 (273)
++++++...+++|||+++++|++.+| ++||+|+|++|||||||||++.+++.+++++|.++|+.+ ||++|+||||+|
T Consensus 97 ~~~~~i~~~ig~TPLv~l~~Ls~~~G~~~~v~lK~E~~nptGSfKdR~a~~~i~~a~~~G~l~~g~t-VV~aSsGN~G~A 175 (435)
T 1jbq_A 97 KILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKPGDT-IIEPTSGNTGIG 175 (435)
T ss_dssp SEESSGGGGSSCCCEEECCSHHHHTTCCSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHHTCSCTTCE-EEEECSSHHHHH
T ss_pred hHHHHHHhhCCCCCeEECcchhhHhCCCceEEEEECCCCCcCCHHHHHHHHHHHHHHHcCCCCCCCE-EEEeCCCHHHHH
Confidence 35667889999999999999988777 699999999999999999999999999999998888765 999999999999
Q ss_pred HHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhH---HHHHHHHHHHhCCCeEeeCCCCCCcchHhhh
Q 024040 84 LAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEG---FVKKGEEILNRTPNGYILGQFENPANPEIHY 160 (273)
Q Consensus 84 ~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~---~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~ 160 (273)
+|++|+++|++|+||||++++..|+++|+.+||+|+.++...++++ ..+.+++++++.++.+|++||+|+.|+.+||
T Consensus 176 lA~aaa~~Gi~~~IvmP~~~s~~k~~~l~~~GAeVv~v~~~~~~d~~~~~~~~a~~la~~~~~~~~i~q~~n~~n~~ag~ 255 (435)
T 1jbq_A 176 LALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHY 255 (435)
T ss_dssp HHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHHHHHHSTTEECCCTTTCTHHHHHHH
T ss_pred HHHHHHHcCCeEEEEeCCCCCHHHHHHHHhCCCEEEEecCCCCcchHHHHHHHHHHHHHhcCCeEEeCccCCcccHHHHH
Confidence 9999999999999999999999999999999999999986444544 4677888888876788999999998887899
Q ss_pred hchHHHHHHhhCCCcCEEEEecCCCccHHHHHHHHHhhCCCcEEEEEecCCCcccc-----CCCCCCccccccCCCCCcc
Q 024040 161 ETTGPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLN-----GGQPGKHLIQGIGAGVIPP 235 (273)
Q Consensus 161 ~t~~~Ei~~q~~~~~d~iv~p~G~Gg~~~Gi~~~~k~~~~~~~vigVe~~~~~~~~-----~~~~~~~~~~glg~~~~~~ 235 (273)
.|++.||++|+++.+|+||+|+|+||+++|++.++|+..|++|||||||++++.+. .+....+.+++++.+..|.
T Consensus 256 ~t~a~EI~eQl~~~~D~vVvpvGtGGtlaGi~~~lk~~~p~vrVigVep~gs~~~~~~~l~~~~~~~~~~~gig~~~~~~ 335 (435)
T 1jbq_A 256 DTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEGSILAEPEELNQTEQTTYEVEGIGYDFIPT 335 (435)
T ss_dssp HTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTCSCSSSGGGGCCSCCCCSCCSCCCSSCCT
T ss_pred HHHHHHHHHHcCCCCCEEEEecCCcHhHHHHHHHHHHhCCCCEEEEEecCCchhhchhhhhcCCCcceeecccccCccch
Confidence 99999999999767999999999999999999999999999999999999986532 2233445678888876666
Q ss_pred cccccCCCeEEEeCHHHHHHHHHHHHHHcCceecccC
Q 024040 236 VLDVAMLDEVITVSSEEAIETSKLLALKEGLLRQLLY 272 (273)
Q Consensus 236 ~~~~~~~d~~v~v~d~e~~~a~~~l~~~eGi~~~ps~ 272 (273)
.+...++|+++.|+|+|+++++++|+++|||++||+|
T Consensus 336 ~l~~~~vd~~~~Vsd~ea~~a~r~La~~eGilve~ss 372 (435)
T 1jbq_A 336 VLDRTVVDKWFKSNDEEAFTFARMLIAQEGLLCGGSA 372 (435)
T ss_dssp TCCGGGCCEEEEECHHHHHHHHHHHHHHSCCCBCHHH
T ss_pred hhhhhhccceEEeCHHHHHHHHHHHHHHcCCEEcHHH
Confidence 6667889999999999999999999999999999986
No 14
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=100.00 E-value=3.1e-57 Score=429.27 Aligned_cols=266 Identities=38% Similarity=0.608 Sum_probs=242.3
Q ss_pred hhhHHHhhccCCCcceecccccCCCC--ceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHH
Q 024040 6 EIKKDVTELIGHTPMVYLNNVVDGCV--ARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIG 83 (273)
Q Consensus 6 ~~~~~i~~~~~~TPl~~~~~l~~~~g--~~l~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a 83 (273)
++++.+...+++|||+++++|++.+| ++||+|+|++|||||||+|++.+++.+++++|.+.||.+ ||++|+||||+|
T Consensus 49 ~~~~~i~~~ig~TPl~~l~~l~~~~g~~~~i~~K~E~~~ptGS~K~R~a~~~i~~a~~~g~~~~g~~-vv~~ssGN~g~a 127 (527)
T 3pc3_A 49 QITPNILEVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSVKDRIGYRMVQDAEEQGLLKPGYT-IIEPTSGNTGIG 127 (527)
T ss_dssp SSCSSGGGGSSCCCEEECCSHHHHTTCCSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHHTCCCTTCE-EEEECSSHHHHH
T ss_pred hHHhhHHhhcCCCCcEEcchhhhhcCCCcEEEEEeccCCCCCCHHHHHHHHHHHHHHHcCCCCCCCE-EEEeCCCHHHHH
Confidence 56678899999999999999988776 799999999999999999999999999999999888865 999999999999
Q ss_pred HHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChh---HHHHHHHHHHHhCCCeEeeCCCCCCcchHhhh
Q 024040 84 LAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFE---GFVKKGEEILNRTPNGYILGQFENPANPEIHY 160 (273)
Q Consensus 84 ~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~---~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~ 160 (273)
+|++|+++|++|+||||++++..|+++++.+||+|+.++...+|+ .+.+.+++++++.++.+|++||+||.++..||
T Consensus 128 ~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~n~~~g~ 207 (527)
T 3pc3_A 128 LAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIRTPTEAAYDSPEGLIYVAQQLQRETPNSIVLDQYRNAGNPLAHY 207 (527)
T ss_dssp HHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECTTSCTTSTTSHHHHHHHHHHHSSSEECCCTTTCTHHHHHHH
T ss_pred HHHHHHHhCCeEEEEEcCCCCHHHHHHHHHCCCEEEEeCCCCCcccHHHHHHHHHHHHHhCCCcEecCCCCCcchHHHHH
Confidence 999999999999999999999999999999999999998654454 36788889988877788999999998887899
Q ss_pred hchHHHHHHhhCCCcCEEEEecCCCccHHHHHHHHHhhCCCcEEEEEecCCCcccc-----CCCCCCccccccCCCCCcc
Q 024040 161 ETTGPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLN-----GGQPGKHLIQGIGAGVIPP 235 (273)
Q Consensus 161 ~t~~~Ei~~q~~~~~d~iv~p~G~Gg~~~Gi~~~~k~~~~~~~vigVe~~~~~~~~-----~~~~~~~~~~glg~~~~~~ 235 (273)
.|++.||++|+++.+|+||+|+|+||+++|++.++|+..|+++||||||++++.+. .+....+.+++++.+..|.
T Consensus 208 ~t~~~Ei~~q~~~~~d~vv~~vG~GG~~~G~~~~~k~~~p~~~vigve~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~p~ 287 (527)
T 3pc3_A 208 DGTAAEILWQLDNKVDMIVVSAGTAGTISGIGRKIKEQVPSCQIVGVDPYGSILARPAELNKTDVQFYEVEGIGYDFPPT 287 (527)
T ss_dssp HTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEETTCCCSSSGGGGCCSCCCCSCCSCCCSSCCT
T ss_pred HHHHHHHHHhcCCCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEecCCcccccchhhcCCCCCceeccccCCCCCCc
Confidence 99999999999778999999999999999999999999999999999999997542 2233456688999988888
Q ss_pred cccccCCCeEEEeCHHHHHHHHHHHHHHcCceecccC
Q 024040 236 VLDVAMLDEVITVSSEEAIETSKLLALKEGLLRQLLY 272 (273)
Q Consensus 236 ~~~~~~~d~~v~v~d~e~~~a~~~l~~~eGi~~~ps~ 272 (273)
.+++.++|+++.|+|+|+++++++|+++|||++|||+
T Consensus 288 ~~~~~~~d~~~~V~d~e~~~a~r~l~~~eGi~~~pss 324 (527)
T 3pc3_A 288 VFDDTVVDVWTKIGDSDCFPMSRRLNAEEGLLCGGSS 324 (527)
T ss_dssp TCCGGGCCEEEEECGGGTHHHHHHHHHHHCCCBCHHH
T ss_pred ccchhhCcEEEEECHHHHHHHHHHHHHHcCceEcHHH
Confidence 8888999999999999999999999999999999986
No 15
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=100.00 E-value=4.6e-58 Score=413.58 Aligned_cols=263 Identities=22% Similarity=0.296 Sum_probs=229.0
Q ss_pred hhhhhHHHhhccCCCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHH
Q 024040 4 KCEIKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIG 83 (273)
Q Consensus 4 ~~~~~~~i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a 83 (273)
+..+++++...+++|||+++++|++.+|.+||+|+|++|||||||+|++.+++.++.+.|.+.+... ||++|+||||+|
T Consensus 12 i~~a~~~i~~~i~~TPL~~~~~l~~~~g~~i~~K~E~~~ptGSfK~Rga~~~i~~a~~~g~~~~~~~-vv~~SsGNhg~a 90 (346)
T 3l6b_A 12 VEKAHINIRDSIHLTPVLTSSILNQLTGRNLFFKCELFQKTGSFKIRGALNAVRSLVPDALERKPKA-VVTHSSGNHGQA 90 (346)
T ss_dssp HHHHHHHHGGGSCCCCEECCHHHHHHHTSEEEEEEGGGSGGGBTHHHHHHHHHHTTC-----CCCSC-EEEECSSHHHHH
T ss_pred HHHHHHHHhcccCCCCeEEchhhHHHhCCeEEEEeCCCCCCCCcHHHHHHHHHHHHHHhccccCCCE-EEEeCCCHHHHH
Confidence 4567889999999999999999998888999999999999999999999999999988754433344 999999999999
Q ss_pred HHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCCCCCCcchHhhhhch
Q 024040 84 LAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETT 163 (273)
Q Consensus 84 ~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~ 163 (273)
+|++|+++|++|+||||++++..|+++++.+||+|+.+++ +++++.+.+++++++. +.+|++|++||.++ +||.|+
T Consensus 91 ~A~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~v~~--~~~~~~~~a~~l~~~~-~~~~i~~~~np~~~-~g~~t~ 166 (346)
T 3l6b_A 91 LTYAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASIVYCEP--SDESRENVAKRVTEET-EGIMVHPNQEPAVI-AGQGTI 166 (346)
T ss_dssp HHHHHHHTTCCEEEEEETTSCHHHHHHHHHTTCEEEEECS--SHHHHHHHHHHHHHHH-TCEECCSSSCHHHH-HHHHHH
T ss_pred HHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECC--CHHHHHHHHHHHHHhc-CCEEECCCCChHHH-HHHHHH
Confidence 9999999999999999999999999999999999999985 4889999999998887 78999999999987 699999
Q ss_pred HHHHHHhhCCCcCEEEEecCCCccHHHHHHHHHhhCCCcEEEEEecCCCcccc----CCCC------CCccccccCCCC-
Q 024040 164 GPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLN----GGQP------GKHLIQGIGAGV- 232 (273)
Q Consensus 164 ~~Ei~~q~~~~~d~iv~p~G~Gg~~~Gi~~~~k~~~~~~~vigVe~~~~~~~~----~~~~------~~~~~~glg~~~- 232 (273)
++||++|+ +.+|+||+|+|+||+++|++.++|+.+|++|||||||++++++. .+.+ ..+.++++..+.
T Consensus 167 ~~Ei~~q~-~~~d~vvv~vG~GG~~aGi~~~~k~~~p~~~vigVe~~~~~~~~~s~~~g~~~~~~~~~~tia~gl~~~~g 245 (346)
T 3l6b_A 167 ALEVLNQV-PLVDALVVPVGGGGMLAGIAITVKALKPSVKVYAAEPSNADDCYQSKLKGKLMPNLYPPETIADGVKSSIG 245 (346)
T ss_dssp HHHHHHHS-TTCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGGGCHHHHHHHHTSCCCCSSCCCCSCGGGCSCCC
T ss_pred HHHHHHhC-CCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEecCCCHHHHHHHHcCCccccCCCCCchhhhccCCCc
Confidence 99999999 58999999999999999999999999999999999999987542 2322 245566766332
Q ss_pred -CcccccccCCCeEEEeCHHHHHHHHHHHHHHcCceecccC
Q 024040 233 -IPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLRQLLY 272 (273)
Q Consensus 233 -~~~~~~~~~~d~~v~v~d~e~~~a~~~l~~~eGi~~~ps~ 272 (273)
..+.+.++++|+++.|+|+|+.+++++|++++|+++|||+
T Consensus 246 ~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~epss 286 (346)
T 3l6b_A 246 LNTWPIIRDLVDDIFTVTEDEIKCATQLVWERMKLLIEPTA 286 (346)
T ss_dssp TTHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred HHHHHHHHHcCCeEEEECHHHHHHHHHHHHHHCCcEEcHHH
Confidence 2233556789999999999999999999999999999986
No 16
>2gn0_A Threonine dehydratase catabolic; TDCB, biodegradative threonine deaminase, PLP, threonine DEH L-threonine metabolism; HET: LLP; 1.70A {Salmonella typhimurium} PDB: 2gn1_A* 2gn2_A*
Probab=100.00 E-value=7.5e-58 Score=411.77 Aligned_cols=259 Identities=24% Similarity=0.298 Sum_probs=230.9
Q ss_pred hhhhhHHHhhccCCCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHH-cCCCCCCCeEEEeeCCChHHH
Q 024040 4 KCEIKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAED-KGLITPGKTVLIELTSGNTGI 82 (273)
Q Consensus 4 ~~~~~~~i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~~~~a~~-~g~~~~g~~~vv~~ssGN~g~ 82 (273)
+..+++++...+++|||+++++|++.+|++||+|+|++|||||||||++.+++.++.+ .+. . +||++|+||||+
T Consensus 27 i~~a~~~i~~~i~~TPL~~l~~l~~~~g~~i~~K~E~~~ptGSfKdR~a~~~i~~a~~~~~~----~-~vv~~ssGN~g~ 101 (342)
T 2gn0_A 27 ILEAKKRLAGKIYKTGMPRSNYFSERCKGEIFLKFENMQRTGSFKIRGAFNKLSSLTEAEKR----K-GVVACSAGNHAQ 101 (342)
T ss_dssp HHHHHHHHTTTSCCCCCCBCHHHHHHHTSEEEEEEGGGSGGGBTHHHHHHHHHHHSCHHHHH----T-CEEEECSSHHHH
T ss_pred HHHHHHHHhhhcCCCCceEchhhHHHhCCEEEEEEccCCCcCChHHHHHHHHHHHHHHhcCC----C-EEEEECCChHHH
Confidence 3467788999999999999999988888999999999999999999999999998763 321 2 499999999999
Q ss_pred HHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCCCCCCcchHhhhhc
Q 024040 83 GLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYET 162 (273)
Q Consensus 83 a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t 162 (273)
|+|++|+++|++|+||||++++..|+++++.+||+|+.+++ +++++.+.+++++++. +++|++||+||.++ .||.|
T Consensus 102 alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~--~~~~~~~~a~~l~~~~-~~~~~~~~~n~~~~-~g~~t 177 (342)
T 2gn0_A 102 GVSLSCAMLGIDGKVVMPKGAPKSKVAATCDYSAEVVLHGD--NFNDTIAKVSEIVETE-GRIFIPPYDDPKVI-AGQGT 177 (342)
T ss_dssp HHHHHHHHHTCCEEEEECTTSCHHHHHHHHHHSCEEEECCS--SHHHHHHHHHHHHHHH-CCEECCSSSSHHHH-HHHHH
T ss_pred HHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHhc-CCEEeCCCCCHHHH-HHHHH
Confidence 99999999999999999999999999999999999999985 4889999999998876 78999999999988 69999
Q ss_pred hHHHHHHhhCCCcCEEEEecCCCccHHHHHHHHHhhCCCcEEEEEecCCCcccc----CCCC-----CCccccccCCCC-
Q 024040 163 TGPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLN----GGQP-----GKHLIQGIGAGV- 232 (273)
Q Consensus 163 ~~~Ei~~q~~~~~d~iv~p~G~Gg~~~Gi~~~~k~~~~~~~vigVe~~~~~~~~----~~~~-----~~~~~~glg~~~- 232 (273)
+++||++|++ .+|+||+|+|+||+++|++.++|+.+|.+|||+|||++++++. .+++ .++.+++++.+.
T Consensus 178 ~~~Ei~~q~~-~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~~~~~~~s~~~g~~~~~~~~~t~a~gl~~~~~ 256 (342)
T 2gn0_A 178 IGLEIMEDLY-DVDNVIVPIGGGGLIAGIAIAIKSINPTIKVIGVQAENVHGMAASYYTGEITTHRTTGTLADGCDVSRP 256 (342)
T ss_dssp HHHHHHHHCT-TCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEETTBCHHHHHHHHTSCCCCCSSCCSCGGGCCSSC
T ss_pred HHHHHHHHcC-CCCEEEEecCCchHHHHHHHHHHHhCCCCeEEEEEeCCChhHHHHHHcCCccccCCCCccccccCCCCc
Confidence 9999999995 7999999999999999999999999999999999999998653 2332 356778888753
Q ss_pred --CcccccccCCCeEEEeCHHHHHHHHHHHHHHcCceecccC
Q 024040 233 --IPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLRQLLY 272 (273)
Q Consensus 233 --~~~~~~~~~~d~~v~v~d~e~~~a~~~l~~~eGi~~~ps~ 272 (273)
.++.++++++|+++.|+|+|+++++++|++++|+++|||+
T Consensus 257 ~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~epss 298 (342)
T 2gn0_A 257 GNLTYEIVRELVDDIVLVSEDEIRNSMIALIQRNKVITEGAG 298 (342)
T ss_dssp CHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHCBCCCTGG
T ss_pred cHHHHHHHHHcCCEEEEECHHHHHHHHHHHHHHcCeEEcHHH
Confidence 2344567889999999999999999999999999999996
No 17
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=100.00 E-value=4.2e-56 Score=403.21 Aligned_cols=258 Identities=18% Similarity=0.166 Sum_probs=227.0
Q ss_pred hhHHHhhccCCCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHH
Q 024040 7 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAF 86 (273)
Q Consensus 7 ~~~~i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~ 86 (273)
..++....+++|||+++++|++.+|++||+|+|++|||||||+|++.+++.++.++|. .+||++|+||||+|+|+
T Consensus 36 ~~~~~~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~Rga~~~i~~a~~~g~-----~~vv~aSsGN~g~alA~ 110 (364)
T 4h27_A 36 FMMSGEPLHVKTPIRDSMALSKMAGTSVYLKMDSAQPSGSFKIRGIGHFCKRWAKQGC-----AHFVCSSSGNAGMAAAY 110 (364)
T ss_dssp -----CCSSCCCCEEEEHHHHHHHTSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTC-----CEEEECCSSHHHHHHHH
T ss_pred hhhhcCCCCCcCCeEEChhhHHHhCCEEEEEeCCCCCCCCHHHHHHHHHHHHHHhcCC-----CEEEEeCCChHHHHHHH
Confidence 3345667889999999999998889999999999999999999999999999998874 45999999999999999
Q ss_pred HHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCCCCCCcchHhhhhchHHH
Q 024040 87 IAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPE 166 (273)
Q Consensus 87 ~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~E 166 (273)
+|+++|++|+||||++++..|+++++.+||+|+.+++ +++++.+.+++++++.++++|++||+||.++ .||.|++.|
T Consensus 111 aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vv~v~~--~~~~a~~~a~~l~~~~~~~~~~~~~~np~~~-~G~~t~~~E 187 (364)
T 4h27_A 111 AARQLGVPATIVVPGTTPALTIERLKNEGATVKVVGE--LLDEAFELAKALAKNNPGWVYIPPFDDPLIW-EGHASIVKE 187 (364)
T ss_dssp HHHHHTCCEEEEEETTSCHHHHHHHHTTTCEEEEECS--STTHHHHHHHHHHHHSTTEEEECSSCSHHHH-HHHTHHHHH
T ss_pred HHHHhCCceEEEECCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHhCCCeEEeCCCCCHHHH-HHHHHHHHH
Confidence 9999999999999999999999999999999999985 5889999999999887689999999999998 599999999
Q ss_pred HHHhhCCCcCEEEEecCCCccHHHHHHHHHhhC-CCcEEEEEecCCCcccc----CCCC-----CCccccccCCCCCcc-
Q 024040 167 IWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKN-PNIKVYGIEPSESAVLN----GGQP-----GKHLIQGIGAGVIPP- 235 (273)
Q Consensus 167 i~~q~~~~~d~iv~p~G~Gg~~~Gi~~~~k~~~-~~~~vigVe~~~~~~~~----~~~~-----~~~~~~glg~~~~~~- 235 (273)
|++|+++.||+||+|+|+||+++|++.++|+.+ |+++||+|||++++++. .+++ ..+.+++|+.+..+.
T Consensus 188 i~~q~~~~~D~vvvpvG~GG~~aGi~~~~k~~~~p~~~vigVe~~~~~~~~~~~~~g~~~~~~~~~tia~gl~~~~~~~~ 267 (364)
T 4h27_A 188 LKETLWEKPGAIALSVGGGGLLCGVVQGLQEVGWGDVPVIAMETFGAHSFHAATTAGKLVSLPKITSVAKALGVKTVGAQ 267 (364)
T ss_dssp HHHHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEETTSCHHHHHHHHTSCCCCSCCCCSCGGGCCSSCCHH
T ss_pred HHHHhCCCCCEEEEcCCccHHHHHHHHHHHHhCCCCCeEEEEecCCChHHHHHHHCCCcccCCCCCcHHHHhCCCCCcHH
Confidence 999997679999999999999999999999886 78999999999998763 2322 345677888765432
Q ss_pred --cccccCCCeEEEeCHHHHHHHHHHHHHHcCceecccC
Q 024040 236 --VLDVAMLDEVITVSSEEAIETSKLLALKEGLLRQLLY 272 (273)
Q Consensus 236 --~~~~~~~d~~v~v~d~e~~~a~~~l~~~eGi~~~ps~ 272 (273)
.+.+++.+..+.|+|+|+++++++|+++|||++|||+
T Consensus 268 ~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~egi~~eps~ 306 (364)
T 4h27_A 268 ALKLFQEHPIFSEVISDQEAVAAIEKFVDDEKILVEPAC 306 (364)
T ss_dssp HHHHHTTSCEEEEEECHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred HHHHHHhcCCEEEEECHHHHHHHHHHHHHHCCCeEcccH
Confidence 3345677888899999999999999999999999976
No 18
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*
Probab=100.00 E-value=2e-57 Score=406.17 Aligned_cols=260 Identities=23% Similarity=0.305 Sum_probs=228.3
Q ss_pred hhhhhHHHhhccCCCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHH-cCCCCCCCeEEEeeCCChHHH
Q 024040 4 KCEIKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAED-KGLITPGKTVLIELTSGNTGI 82 (273)
Q Consensus 4 ~~~~~~~i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~~~~a~~-~g~~~~g~~~vv~~ssGN~g~ 82 (273)
+..+++++...+++|||+++++|++..|.+||+|+|++|||||||+|++.+++.++.+ ++ ..+||++|+||||+
T Consensus 13 i~~a~~~i~~~i~~TPL~~~~~l~~~~g~~i~~K~E~~~ptGS~KdRga~~~i~~~~~~~~-----~~~vv~~ssGN~g~ 87 (323)
T 1v71_A 13 VASASERIKKFANKTPVLTSSTVNKEFVAEVFFKCENFQKMGAFKFRGALNALSQLNEAQR-----KAGVLTFSSGNHAQ 87 (323)
T ss_dssp HHHHHHHHTTTSCCCCEECCHHHHHHHTSEEEEEEGGGSGGGBTHHHHHHHHHTTCCHHHH-----HHCEEECCSSHHHH
T ss_pred HHHHHHHHhccCCCCCceEhHhhHHHhCCeEEEEecCCCCcCCHHHHHHHHHHHHHHHhcC-----CCeEEEeCCCcHHH
Confidence 3457788999999999999999988788999999999999999999999999986543 22 23499999999999
Q ss_pred HHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCCCCCCcchHhhhhc
Q 024040 83 GLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYET 162 (273)
Q Consensus 83 a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t 162 (273)
|+|++|+++|++|+||||++++..|+++++.+||+|+.+++. ++++.+.+++++++. +++|++||+||.++ .||.|
T Consensus 88 alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~--~~~~~~~a~~l~~~~-~~~~i~~~~n~~~~-~g~~t 163 (323)
T 1v71_A 88 AIALSAKILGIPAKIIMPLDAPEAKVAATKGYGGQVIMYDRY--KDDREKMAKEISERE-GLTIIPPYDHPHVL-AGQGT 163 (323)
T ss_dssp HHHHHHHHTTCCEEEEEETTCCHHHHHHHHHTTCEEEEECTT--TTCHHHHHHHHHHHH-TCBCCCSSSSHHHH-HHHTH
T ss_pred HHHHHHHHcCCCEEEECCCCCcHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhc-CCEecCCCCCcchh-hhHhH
Confidence 999999999999999999999999999999999999999864 677888899998876 67889999999988 59999
Q ss_pred hHHHHHHhhCCCcCEEEEecCCCccHHHHHHHHHhhCCCcEEEEEecCCCcccc----CCCC-----CCccccccCCCCC
Q 024040 163 TGPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLN----GGQP-----GKHLIQGIGAGVI 233 (273)
Q Consensus 163 ~~~Ei~~q~~~~~d~iv~p~G~Gg~~~Gi~~~~k~~~~~~~vigVe~~~~~~~~----~~~~-----~~~~~~glg~~~~ 233 (273)
+++||++|++ .+|+||+|+|+|||++|++.++|+.+|++|||+|||++++++. .+++ ..+.+++++.+..
T Consensus 164 ~~~Ei~~q~~-~~d~vv~~vG~GGt~~Gi~~~~k~~~~~~~vigve~~~~~~~~~~~~~g~~~~~~~~~t~a~gl~~~~~ 242 (323)
T 1v71_A 164 AAKELFEEVG-PLDALFVCLGGGGLLSGSALAARHFAPNCEVYGVEPEAGNDGQQSFRKGSIVHIDTPKTIADGAQTQHL 242 (323)
T ss_dssp HHHHHHHHHC-CCSEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCHHHHHHHHTSCCCCCCCCCSCTTSCCSSC
T ss_pred HHHHHHHhcC-CCCEEEEecCCcHHHHHHHHHHHHcCCCCEEEEEEeCCCchHHHHHHcCCceecCCCCcccccccCCCC
Confidence 9999999995 7999999999999999999999999999999999999987653 2332 2466778877642
Q ss_pred ---cccccccCCCeEEEeCHHHHHHHHHHHHHHcCceecccCC
Q 024040 234 ---PPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLRQLLYE 273 (273)
Q Consensus 234 ---~~~~~~~~~d~~v~v~d~e~~~a~~~l~~~eGi~~~ps~~ 273 (273)
++.+.++++|+++.|+|+|+++++++|+++|||++||||.
T Consensus 243 ~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~eps~a 285 (323)
T 1v71_A 243 GNYTFSIIKEKVDDILTVSDEELIDCLKFYAARMKIVVEPTGC 285 (323)
T ss_dssp CHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHTCCCCCGGGG
T ss_pred cHHHHHHHHHhCCEEEEECHHHHHHHHHHHHHhcCeEEcHHHH
Confidence 2245567899999999999999999999999999999973
No 19
>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1
Probab=100.00 E-value=8e-57 Score=400.28 Aligned_cols=258 Identities=23% Similarity=0.260 Sum_probs=226.8
Q ss_pred hhhhhHHHhhccCCCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHH
Q 024040 4 KCEIKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIG 83 (273)
Q Consensus 4 ~~~~~~~i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a 83 (273)
+..+++++...+++|||+++++|++.+|.+||+|+|++|||||||||++.+++.++. + ..+||++|+||||+|
T Consensus 7 i~~a~~~i~~~~~~TPL~~~~~l~~~~g~~i~~K~E~~~ptgSfKdR~a~~~i~~l~--~-----~~~vv~~ssGN~g~a 79 (311)
T 1ve5_A 7 LYAAFRRIAPYTHRTPLLTSRLLDGLLGKRLLLKAEHLQKTGSFKARGALSKALALE--N-----PKGLLAVSSGNHAQG 79 (311)
T ss_dssp HHHHHHHHGGGSCCCCEEECHHHHHHTTSEEEEEEGGGSGGGBTHHHHHHHHHHHSS--S-----CCCEEEECSSHHHHH
T ss_pred HHHHHHHHhccCCCCCceechhhHHhhCCeEEEEecCCCCcCCcHHHHHHHHHHHhc--C-----CCeEEEECCCcHHHH
Confidence 456788999999999999999998888899999999999999999999999999876 2 234999999999999
Q ss_pred HHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCCCCCCcchHhhhhch
Q 024040 84 LAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETT 163 (273)
Q Consensus 84 ~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~ 163 (273)
+|++|+++|++|+||||++++..|+++++.+||+|+.++++ ++++.+.+++++++. +++|++||+||.++ .||.|+
T Consensus 80 lA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~--~~~~~~~a~~~~~~~-~~~~~~~~~n~~~~-~g~~t~ 155 (311)
T 1ve5_A 80 VAYAAQVLGVKALVVMPEDASPYKKACARAYGAEVVDRGVT--AKNREEVARALQEET-GYALIHPFDDPLVI-AGQGTA 155 (311)
T ss_dssp HHHHHHHHTCCEEEECCCC--CCHHHHHHHTTCEEECTTCC--TTTHHHHHHHHHHHH-CCEECCSSSSHHHH-HHHHHH
T ss_pred HHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhc-CcEecCCCCCcchh-hhccHH
Confidence 99999999999999999999999999999999999999864 788999999998876 78999999999988 599999
Q ss_pred HHHHHHhhC---CCcCEEEEecCCCccHHHHHHHHHhhCCCcEEEEEecCCCcccc----CCCC------CCccccccCC
Q 024040 164 GPEIWNDSG---GKVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLN----GGQP------GKHLIQGIGA 230 (273)
Q Consensus 164 ~~Ei~~q~~---~~~d~iv~p~G~Gg~~~Gi~~~~k~~~~~~~vigVe~~~~~~~~----~~~~------~~~~~~glg~ 230 (273)
++||++|++ +.+|+||+|+|+||+++|++.++|+.+|++|||+|||++++++. .+++ ..+.+++++.
T Consensus 156 ~~Ei~~q~~~~~~~~d~vvvpvG~Gg~~~Gi~~~~k~~~~~~~vigve~~~~~~~~~~~~~g~~~~~~~~~~~i~~gl~~ 235 (311)
T 1ve5_A 156 GLELLAQAGRMGVFPGAVLAPVGGGGLLAGLATAVKALSPTTLVLGVEPEAADDAKRSLEAGRILRLEAPPRTRADGVRT 235 (311)
T ss_dssp HHHHHHHHHHHTCCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGGGCHHHHHHHHTSCCCCSSCCCCSCGGGCC
T ss_pred HHHHHHHHHhcCCCCCEEEEccCchHHHHHHHHHHHHhCCCCEEEEEEeCCChHHHHHHHcCCccccCCCCCeeeCcCCC
Confidence 999999995 57999999999999999999999999999999999999987652 2332 2455677776
Q ss_pred CC---CcccccccCCCeEEEeCHHHHHHHHHHHHHHcCceecccC
Q 024040 231 GV---IPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLRQLLY 272 (273)
Q Consensus 231 ~~---~~~~~~~~~~d~~v~v~d~e~~~a~~~l~~~eGi~~~ps~ 272 (273)
+. .++.+.++++|+++.|+|+|+++++++|+++||+++|||+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~epss 280 (311)
T 1ve5_A 236 LSLGERTFPILRERVDGILTVSEEALLEAERLLFTRTKQVVEPTG 280 (311)
T ss_dssp SSCCTTTHHHHHHHCCEEEEECHHHHHHHHHHHHHHTCBCCCGGG
T ss_pred CCccHHHHHHHHhcCCEEEEECHHHHHHHHHHHHHhcCceEchHH
Confidence 43 2333556789999999999999999999999999999996
No 20
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=100.00 E-value=3.8e-56 Score=404.41 Aligned_cols=259 Identities=18% Similarity=0.163 Sum_probs=227.2
Q ss_pred hhhHHHhhccCCCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHH
Q 024040 6 EIKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLA 85 (273)
Q Consensus 6 ~~~~~i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A 85 (273)
+.++++...+++|||+++++|++.+|.+||+|+|++|||||||||++.+++.++.++|. .+||++|+||||+|+|
T Consensus 35 ~~~p~~~~~~~~TPL~~l~~l~~~~g~~i~~K~E~~~ptGSfKdRga~~~l~~a~~~g~-----~~vv~aSsGN~g~alA 109 (372)
T 1p5j_A 35 EFMMSGEPLHVKTPIRDSMALSKMAGTSVYLKMDSAQPSGSFKIRGIGHFCKRWAKQGC-----AHFVCSSAGNAGMAAA 109 (372)
T ss_dssp -----CCCSSCCCCEEEEHHHHHHHTSCEEEECGGGSGGGBTTHHHHHHHHHHHHHTTC-----CEEEECCSSHHHHHHH
T ss_pred HhcccccCCCCCCCceEcHhhHHHhCCEEEEEEcCCCCCCChHHHHHHHHHHHHHHcCC-----CEEEEeCCCHHHHHHH
Confidence 34556778899999999999988888999999999999999999999999999988763 4599999999999999
Q ss_pred HHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCCCCCCcchHhhhhchHH
Q 024040 86 FIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGP 165 (273)
Q Consensus 86 ~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~ 165 (273)
++|+++|++|+||||++++..|+++|+.+||+|+.+++ +++++.+.+++++++.++++|++||+||.++ .||.|+++
T Consensus 110 ~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~--~~~~a~~~a~~l~~~~~~~~~v~~~~n~~~~-~G~~t~~~ 186 (372)
T 1p5j_A 110 YAARQLGVPATIVVPGTTPALTIERLKNEGATCKVVGE--LLDEAFELAKALAKNNPGWVYIPPFDDPLIW-EGHASIVK 186 (372)
T ss_dssp HHHHHHTCCEEEEECTTCCHHHHHHHHHTTCEEEECCS--CHHHHHHHHHHHHHHSTTEEECCSSCCHHHH-HHHTHHHH
T ss_pred HHHHHcCCcEEEEECCCCCHHHHHHHHhcCCEEEEECC--CHHHHHHHHHHHHHhcCCcEEeCCCCCHHHH-hhHHHHHH
Confidence 99999999999999999999999999999999999985 5899999999999885589999999999998 59999999
Q ss_pred HHHHhhCCCcCEEEEecCCCccHHHHHHHHHhhC-CCcEEEEEecCCCcccc----CCCC-----CCccccccCCCCCcc
Q 024040 166 EIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKN-PNIKVYGIEPSESAVLN----GGQP-----GKHLIQGIGAGVIPP 235 (273)
Q Consensus 166 Ei~~q~~~~~d~iv~p~G~Gg~~~Gi~~~~k~~~-~~~~vigVe~~~~~~~~----~~~~-----~~~~~~glg~~~~~~ 235 (273)
||++|++..+|+||+|+|+||+++|++.++|+.+ |++|||+|||++++++. .+++ ..+.+++|+.+..+.
T Consensus 187 Ei~~ql~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~p~~~vigVe~~~~~~~~~~~~~g~~~~~~~~~tia~gl~~~~~~~ 266 (372)
T 1p5j_A 187 ELKETLWEKPGAIALSVGGGGLLCGVVQGLQECGWGDVPVIAMETFGAHSFHAATTAGKLVSLPKITSVAKALGVKTVGS 266 (372)
T ss_dssp HHHHHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEETTSCHHHHHHHHTSCCCCSCCCCSCGGGCCSSCCH
T ss_pred HHHHHcCCCCCEEEEecCCchHHHHHHHHHHHhCCCCceEEEEecCCChHHHHHHHcCCceecCCCceeecccCCCCCCH
Confidence 9999997669999999999999999999999986 88999999999987653 2322 245678888765442
Q ss_pred ---cccccCCCeEEEeCHHHHHHHHHHHHHHcCceecccC
Q 024040 236 ---VLDVAMLDEVITVSSEEAIETSKLLALKEGLLRQLLY 272 (273)
Q Consensus 236 ---~~~~~~~d~~v~v~d~e~~~a~~~l~~~eGi~~~ps~ 272 (273)
.+.+.+.|+++.|+|+|+++++++|+++|||++|||+
T Consensus 267 ~~~~~~~~~~~~~~~Vsd~e~~~a~~~l~~~eGi~~epss 306 (372)
T 1p5j_A 267 QALKLFQEHPIFSEVISDQEAVAAIEKFVDDEKILVEPAC 306 (372)
T ss_dssp HHHHHHHHSCEEEEEECHHHHHHHHHHHHHHTCCCCCHHH
T ss_pred HHHHHHhhcCCEEEEECHHHHHHHHHHHHHHcCCeechhH
Confidence 2345678899999999999999999999999999986
No 21
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.3e-55 Score=391.99 Aligned_cols=251 Identities=20% Similarity=0.204 Sum_probs=223.3
Q ss_pred hccCCCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcC
Q 024040 13 ELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRG 92 (273)
Q Consensus 13 ~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g 92 (273)
+.+++|||+++++|++.+|.+||+|+|++|||||||||++.+++.++.++|. .+||++|+||||+|+|++|+++|
T Consensus 3 ~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptgS~K~R~a~~~l~~a~~~g~-----~~vv~~ssGN~g~alA~~a~~~G 77 (318)
T 2rkb_A 3 PFHVVTPLLESWALSQVAGMPVFLKCENVQPSGSFKIRGIGHFCQEMAKKGC-----RHLVCSSGGNAGIAAAYAARKLG 77 (318)
T ss_dssp CSSCCCCEEEEHHHHHHHTSCEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTC-----CEEEECCCSHHHHHHHHHHHHHT
T ss_pred CCCccCCceehHhhHHHhCCeEEEEecCCCCCCCHHHHHHHHHHHHHHHcCC-----CEEEEECCchHHHHHHHHHHHcC
Confidence 4578999999999988788899999999999999999999999999998763 45999999999999999999999
Q ss_pred CeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCCCCCCcchHhhhhchHHHHHHhhC
Q 024040 93 YKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSG 172 (273)
Q Consensus 93 ~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~ 172 (273)
++|+||||+++++.|+++|+.+||+|+.+++ +++++.+.+++++++. +++|++||+||.++ .||.|+++||++|++
T Consensus 78 ~~~~i~~p~~~~~~k~~~~~~~Ga~V~~~~~--~~~~~~~~a~~~~~~~-~~~~~~~~~n~~~~-~g~~t~~~Ei~~q~~ 153 (318)
T 2rkb_A 78 IPATIVLPESTSLQVVQRLQGEGAEVQLTGK--VWDEANLRAQELAKRD-GWENVPPFDHPLIW-KGHASLVQELKAVLR 153 (318)
T ss_dssp CCEEEEECTTCCHHHHHHHHHTTCEEEECCS--SHHHHHHHHHHHHHST-TEEECCSSCSHHHH-HHHHHHHHHHHHHSS
T ss_pred CCEEEEECCCCcHHHHHHHHhcCCEEEEECC--CHHHHHHHHHHHHHhc-CCEEeCCCCChhhc-cchhHHHHHHHHhcC
Confidence 9999999999999999999999999999985 5899999999998875 88999999999998 599999999999997
Q ss_pred CCcCEEEEecCCCccHHHHHHHHHhhC-CCcEEEEEecCCCcccc----CCCC-----CCccccccCCCCCcc---cccc
Q 024040 173 GKVDAFIAGIGTGGTVTGAGRFLKEKN-PNIKVYGIEPSESAVLN----GGQP-----GKHLIQGIGAGVIPP---VLDV 239 (273)
Q Consensus 173 ~~~d~iv~p~G~Gg~~~Gi~~~~k~~~-~~~~vigVe~~~~~~~~----~~~~-----~~~~~~glg~~~~~~---~~~~ 239 (273)
..+|+||+|+|+||+++|++.++|+.+ |.+|||+|||++++++. .+++ ..+.+++++.+..+. .+.+
T Consensus 154 ~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~~~~~~~~~~~~~g~~~~~~~~~t~a~gl~~~~~~~~~~~~~~ 233 (318)
T 2rkb_A 154 TPPGALVLAVGGGGLLAGVVAGLLEVGWQHVPIIAMETHGAHCFNAAITAGKLVTLPDITSVAKSLGAKTVAARALECMQ 233 (318)
T ss_dssp SCCSEEEEECSSSHHHHHHHHHHHHHTCTTSCEEEEEETTBCHHHHHHHHTSCCBCSCCCSSCGGGCCSBCCHHHHHHHH
T ss_pred CCCCEEEEeeCCCcHHHHHHHHHHHhCCCCCEEEEEecCCChHHHHHHHcCCcccCCCCCceecccCCCCCCHHHHHHHH
Confidence 679999999999999999999999886 78999999999987653 2322 245677888765442 2345
Q ss_pred cCCCeEEEeCHHHHHHHHHHHHHHcCceecccC
Q 024040 240 AMLDEVITVSSEEAIETSKLLALKEGLLRQLLY 272 (273)
Q Consensus 240 ~~~d~~v~v~d~e~~~a~~~l~~~eGi~~~ps~ 272 (273)
.+.|+++.|+|+|+++++++|++++|+++|||+
T Consensus 234 ~~~~~~~~v~d~e~~~a~~~l~~~~gi~~eps~ 266 (318)
T 2rkb_A 234 VCKIHSEVVEDTEAVSAVQQLLDDERMLVEPAC 266 (318)
T ss_dssp HSCEEEEEECHHHHHHHHHHHHHHHCBCCCHHH
T ss_pred HcCCEEEEECHHHHHHHHHHHHHhcCcEEchhH
Confidence 677899999999999999999999999999986
No 22
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=100.00 E-value=1.8e-55 Score=411.35 Aligned_cols=254 Identities=26% Similarity=0.318 Sum_probs=227.4
Q ss_pred HHhhccCCCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHH
Q 024040 10 DVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAA 89 (273)
Q Consensus 10 ~i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~ 89 (273)
++...+++|||+++++|++.+|++||+|+|++|||||||+|++.+++.++.+++. ..+||++|+||||+|+|++|+
T Consensus 24 ~i~~~i~~TPL~~l~~Ls~~~g~~V~lK~E~lqPtgSfKdRgA~n~i~~l~~~~~----~~gVV~aSsGNhg~avA~aa~ 99 (514)
T 1tdj_A 24 PVYEAAQVTPLQKMEKLSSRLDNVILVKREDRQPVHSFKLRGAYAMMAGLTEEQK----AHGVITASAGNHAQGVAFSSA 99 (514)
T ss_dssp CGGGTCCCCCEEECHHHHHHTTSEEEEECGGGSTTSSSTHHHHHHHHHTTTTSSC----SSSCEEEECSSSHHHHHHHHH
T ss_pred hHhcccCCCCcEEchhhHHhhCCeEEEEECCCCCcccHHHHHHHHHHHHHHHhcC----CCEEEEECCcHHHHHHHHHHH
Confidence 6788899999999999998889999999999999999999999999998765432 234999999999999999999
Q ss_pred HcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCCCCCCcchHhhhhchHHHHHH
Q 024040 90 SRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWN 169 (273)
Q Consensus 90 ~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~ 169 (273)
++|++|+||||++++..|+++++.+||+|+.+++ +++++.+.+++++++. +.+|++||+||.++ +||+|++.||++
T Consensus 100 ~lGi~~~IvmP~~~p~~Kv~~~r~~GAeVvlv~~--~~dda~~~a~ela~e~-g~~~v~pfdnp~~i-aGqgTig~EI~e 175 (514)
T 1tdj_A 100 RLGVKALIVMPTATADIKVDAVRGFGGEVLLHGA--NFDEAKAKAIELSQQQ-GFTWVPPFDHPMVI-AGQGTLALELLQ 175 (514)
T ss_dssp HTTCCEEEECCSSCCHHHHHHHHHHSCEEECCCS--SHHHHHHHHHHHHHHH-CCEECCSSCCHHHH-HHHHHHHHHHHH
T ss_pred HcCCcEEEEECCCCCHHHHHHHHHCCCEEEEECC--CHHHHHHHHHHHHHhc-CCEeeCCCCCHHHH-HHHHHHHHHHHH
Confidence 9999999999999999999999999999999984 5899999999999886 78999999999998 699999999999
Q ss_pred hhCCCcCEEEEecCCCccHHHHHHHHHhhCCCcEEEEEecCCCcccc----CCCC-----CCccccccCCCCC---cccc
Q 024040 170 DSGGKVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLN----GGQP-----GKHLIQGIGAGVI---PPVL 237 (273)
Q Consensus 170 q~~~~~d~iv~p~G~Gg~~~Gi~~~~k~~~~~~~vigVe~~~~~~~~----~~~~-----~~~~~~glg~~~~---~~~~ 237 (273)
|++. +|+||+|+|+||+++|++.++|+++|++|||||||++++++. .+++ ..+.++|++...+ ++.+
T Consensus 176 Ql~~-~D~vvvpvGgGGliaGia~~lk~~~P~~kVIgVep~~a~~l~~sl~~G~~~~l~~v~tiadGiav~~~g~~~~~l 254 (514)
T 1tdj_A 176 QDAH-LDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEAEDSACLKAALDAGHPVDLPRVGLFAEGVAVKRIGDETFRL 254 (514)
T ss_dssp HCTT-CCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTTCHHHHHHHHTSCCCCSCCCSSSSTTCCSSCCCHHHHH
T ss_pred HCCC-CCEEEEccCcHHHHHHHHHHHHHhCCCCEEEEEeccCChhHHHHHhcCCeeecCCccccccchhcCCCChHHHHH
Confidence 9964 999999999999999999999999999999999999998764 2332 2345677766432 3446
Q ss_pred cccCCCeEEEeCHHHHHHHHHHHHHHcCceecccC
Q 024040 238 DVAMLDEVITVSSEEAIETSKLLALKEGLLRQLLY 272 (273)
Q Consensus 238 ~~~~~d~~v~v~d~e~~~a~~~l~~~eGi~~~ps~ 272 (273)
+++++|+++.|+|+|+.+++++|++++|+++|||+
T Consensus 255 ~~~~vd~~v~Vsd~ei~~ai~~L~~~~givvEPsg 289 (514)
T 1tdj_A 255 CQEYLDDIITVDSDAICAAMKDLFEDVRAVAEPSG 289 (514)
T ss_dssp HTTSCCEEEEECHHHHHHHHHHHHHHTCCCCCHHH
T ss_pred HHHhCCeEEEECHHHHHHHHHHHHHHcCeEEcHHH
Confidence 78899999999999999999999999999999985
No 23
>3aey_A Threonine synthase; PLP, pyridoxal phosphate, lyase; 1.92A {Thermus thermophilus} PDB: 1uin_A* 1uim_A* 3aex_A* 1v7c_A
Probab=100.00 E-value=7.7e-55 Score=393.55 Aligned_cols=255 Identities=20% Similarity=0.220 Sum_probs=226.1
Q ss_pred hHHHhhccCCCcceec--ccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHH
Q 024040 8 KKDVTELIGHTPMVYL--NNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLA 85 (273)
Q Consensus 8 ~~~i~~~~~~TPl~~~--~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A 85 (273)
.+++.+.+++|||+++ ++|++..|++||+|+|++|||||||||++.+++.++.++|. .+||++|+||||+|+|
T Consensus 19 ~~~v~~~~g~TPL~~~~~~~l~~~~g~~v~~K~E~~~ptgS~KdR~a~~~l~~a~~~g~-----~~vv~~SsGN~g~alA 93 (351)
T 3aey_A 19 TPVISLLEGSTPLIPLKGPEEARKKGIRLYAKYEGLNPTGSFKDRGMTLAVSKAVEGGA-----QAVACASTGNTAASAA 93 (351)
T ss_dssp SCCCCSCCCCCCEEECCCCHHHHTTTCEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTC-----SEEEESCSSHHHHHHH
T ss_pred CCceecCCCCCCeeecCchhhHHHhCCeEEEEecCCCCcccHHHHHHHHHHHHHHhcCC-----CEEEEeCCCHHHHHHH
Confidence 3578899999999999 99988888999999999999999999999999999998884 4599999999999999
Q ss_pred HHHHHcCCeEEEEecCC-CCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCCCCCCcchHhhhhchH
Q 024040 86 FIAASRGYKLIIIMPST-YSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTG 164 (273)
Q Consensus 86 ~~a~~~g~~~~i~~p~~-~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~ 164 (273)
++|+++|++|+||||++ ++..|+++++.+||+|+.+++ +++++.+.+++++++. +.+|+++ +||.++ .||.|++
T Consensus 94 ~~a~~~G~~~~iv~p~~~~~~~k~~~~~~~GA~V~~v~~--~~~~~~~~a~~l~~~~-~~~~~~~-~n~~~~-~g~~t~~ 168 (351)
T 3aey_A 94 AYAARAGILAIVVLPAGYVALGKVAQSLVHGARIVQVEG--NFDDALRLTQKLTEAF-PVALVNS-VNPHRL-EGQKTLA 168 (351)
T ss_dssp HHHHHHTSEEEEEEETTCSCHHHHHHHHHTTCEEEEEES--CHHHHHHHHHHHHHHS-SEEECST-TCHHHH-HHHHHHH
T ss_pred HHHHHcCCCEEEEECCCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHhc-CcEecCC-CCccce-eeeeeHH
Confidence 99999999999999998 999999999999999999986 4889999999998887 5888887 889888 5999999
Q ss_pred HHHHHhhCCCcCEEEEecCCCccHHHHHHHHHhhCC------CcEEEEEecCCCccccCCCC---CCccccccCCCCCc-
Q 024040 165 PEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNP------NIKVYGIEPSESAVLNGGQP---GKHLIQGIGAGVIP- 234 (273)
Q Consensus 165 ~Ei~~q~~~~~d~iv~p~G~Gg~~~Gi~~~~k~~~~------~~~vigVe~~~~~~~~~~~~---~~~~~~glg~~~~~- 234 (273)
+||++|++..||+||+|+|+||+++|++.++|+.++ .+||++|||++++++..+++ ..+.+++++.+..+
T Consensus 169 ~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~~~vigve~~~~~~~~~g~~~~~~~t~a~gl~~~~~~~ 248 (351)
T 3aey_A 169 FEVVDELGDAPHYHALPVGNAGNITAHWMGYKAYHALGKAKRLPRMLGFQAAGAAPLVLGRPVERPETLATAIRIGNPAS 248 (351)
T ss_dssp HHHHHHHSSCCSEEEEECSSSHHHHHHHHHHHHHHHHTSCSSCCEEEEEEEGGGCHHHHTSCCSSCCCSCGGGCCSSCTT
T ss_pred HHHHHHcCCCCCEEEEecCchHHHHHHHHHHHHHHhccccCCCCeEEEEecCCCChhhcCcccCCccchhHhhcCCCCCC
Confidence 999999976799999999999999999999998753 68999999999987755544 23567888876421
Q ss_pred cc----ccccCCCeEEEeCHHHHHHHHHHHHHHcCceecccC
Q 024040 235 PV----LDVAMLDEVITVSSEEAIETSKLLALKEGLLRQLLY 272 (273)
Q Consensus 235 ~~----~~~~~~d~~v~v~d~e~~~a~~~l~~~eGi~~~ps~ 272 (273)
+. +.++++|+++.|+|+|+++++++|+++||+++||||
T Consensus 249 ~~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~~gi~~epss 290 (351)
T 3aey_A 249 WQGAVRAKEESGGVIEAVTDEEILFAYRYLAREEGIFCEPAS 290 (351)
T ss_dssp HHHHHHHHHHHTCEEEEECHHHHHHHHHHHHHHTCCCBCHHH
T ss_pred HHHHHHHHHHhCCeEEEECHHHHHHHHHHHHHhCCEEECchH
Confidence 11 235678899999999999999999999999999986
No 24
>2d1f_A Threonine synthase; amino acid synthesis, pyridoxal-5'-phosphate, PLP, lyase; HET: PLP; 2.50A {Mycobacterium tuberculosis}
Probab=100.00 E-value=7.3e-55 Score=394.84 Aligned_cols=254 Identities=22% Similarity=0.277 Sum_probs=226.1
Q ss_pred HHHhhccCCCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHH
Q 024040 9 KDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIA 88 (273)
Q Consensus 9 ~~i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a 88 (273)
+++.+.+++|||+++++|++.+|++||+|+|++|||||||||++.+++.++.++|. .+||++|+||||+|+|++|
T Consensus 30 ~~v~~~~g~TPL~~~~~l~~~~g~~i~~K~E~~~ptgSfKdR~a~~~l~~a~~~g~-----~~vv~aSsGN~g~alA~~a 104 (360)
T 2d1f_A 30 TPVTLLEGGTPLIAATNLSKQTGCTIHLKVEGLNPTGSFKDRGMTMAVTDALAHGQ-----RAVLCASTGNTSASAAAYA 104 (360)
T ss_dssp CCCCCCCCCCCEEECHHHHHHHSSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTC-----SEEEECCSSHHHHHHHHHH
T ss_pred CccccccCCCCCeechhhHHHhCCeEEEEECCCCCCcCHHHHHHHHHHHHHHHCCC-----CEEEEeCCcHHHHHHHHHH
Confidence 56788999999999999988888999999999999999999999999999998884 4599999999999999999
Q ss_pred HHcCCeEEEEecCC-CCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCCCCCCcchHhhhhchHHHH
Q 024040 89 ASRGYKLIIIMPST-YSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEI 167 (273)
Q Consensus 89 ~~~g~~~~i~~p~~-~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei 167 (273)
+++|++|+||||++ ++..|+++++.+||+|+.+++ +++++.+.+++++++.++.+|+++ +||.++ .||.|+++||
T Consensus 105 ~~~G~~~~i~~p~~~~~~~k~~~~~~~GA~v~~v~~--~~~~~~~~a~~l~~~~~~~~~i~~-~n~~~~-~g~~t~~~Ei 180 (360)
T 2d1f_A 105 ARAGITCAVLIPQGKIAMGKLAQAVMHGAKIIQIDG--NFDDCLELARKMAADFPTISLVNS-VNPVRI-EGQKTAAFEI 180 (360)
T ss_dssp HHHTCEEEEEECSSCCCHHHHHHHHHTTCEEEEBSS--CHHHHHHHHHHHHHHCTTEEECST-TCHHHH-HHHTHHHHHH
T ss_pred HHcCCcEEEEEcCCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHhcCCeEEcCC-CChhhh-hhHHHHHHHH
Confidence 99999999999998 999999999999999999986 489999999999988755888887 899988 5999999999
Q ss_pred HHhhCCCcCEEEEecCCCccHHHHHHHHHhhCC------CcEEEEEecCCCccccCCCC---CCccccccCCCCCccc--
Q 024040 168 WNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNP------NIKVYGIEPSESAVLNGGQP---GKHLIQGIGAGVIPPV-- 236 (273)
Q Consensus 168 ~~q~~~~~d~iv~p~G~Gg~~~Gi~~~~k~~~~------~~~vigVe~~~~~~~~~~~~---~~~~~~glg~~~~~~~-- 236 (273)
++|++..||+||+|+|+||+++|++.++|+.++ .+||++|||++++++..+++ ..+.+++++.+. |.+
T Consensus 181 ~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~~~vigve~~~~~~~~~g~~~~~~~t~a~gl~~~~-~~~~~ 259 (360)
T 2d1f_A 181 VDVLGTAPDVHALPVGNAGNITAYWKGYTEYHQLGLIDKLPRMLGTQAAGAAPLVLGEPVSHPETIATAIRIGS-PASWT 259 (360)
T ss_dssp HHHHSSCCSEEEEECSSSHHHHHHHHHHHHHHHTTSCSSCCEEEEEEEGGGCHHHHSSCCSSCCCSCGGGCCSS-CTTHH
T ss_pred HHHcCCCCCEEEEeCCchHHHHHHHHHHHHHHhccccccCceEEEEecCCCCHHhcCCccCCccchHHHhCCCC-CCcHH
Confidence 999976799999999999999999999998753 68999999999987755544 235678888764 222
Q ss_pred ----ccccCCCeEEEeCHHHHHHHHHHHHHHcCceecccC
Q 024040 237 ----LDVAMLDEVITVSSEEAIETSKLLALKEGLLRQLLY 272 (273)
Q Consensus 237 ----~~~~~~d~~v~v~d~e~~~a~~~l~~~eGi~~~ps~ 272 (273)
+.+++.|+++.|+|+|+++++++|+++||+++||||
T Consensus 260 ~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~eGi~~epss 299 (360)
T 2d1f_A 260 SAVEAQQQSKGRFLAASDEEILAAYHLVARVEGVFVEPAS 299 (360)
T ss_dssp HHHHHHHHHTCEEEEECHHHHHHHHHHHHHHHCCCBCHHH
T ss_pred HHHHHHHHhCCeEEEECHHHHHHHHHHHHHhcCeeECchH
Confidence 235678899999999999999999999999999986
No 25
>2zsj_A Threonine synthase; PLP dependent enzyme, lyase; HET: PLP; 1.80A {Aquifex aeolicus}
Probab=100.00 E-value=1.6e-54 Score=391.69 Aligned_cols=255 Identities=23% Similarity=0.215 Sum_probs=225.7
Q ss_pred hHHHhhccCCCcceecccccCCCCce--EEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHH
Q 024040 8 KKDVTELIGHTPMVYLNNVVDGCVAR--IAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLA 85 (273)
Q Consensus 8 ~~~i~~~~~~TPl~~~~~l~~~~g~~--l~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A 85 (273)
.+++.+.+++|||+++++|++.+|++ ||+|+|++|||||||||++.+++.++.++|. .+||++|+||||+|+|
T Consensus 21 ~~~v~~~~g~TPL~~~~~l~~~~g~~~~i~~K~E~~~ptGS~KdR~a~~~l~~a~~~g~-----~~vv~~SsGN~g~alA 95 (352)
T 2zsj_A 21 TPIVTLYEGNTPLIEADNLARAIGFKGKIYLKYEGLNPTGSFKDRGMTLAISKAVEAGK-----RAVICASTGNTSASAA 95 (352)
T ss_dssp CCCCCCCCCCCCEEECHHHHHHHTCCSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTC-----CEEEECCSSHHHHHHH
T ss_pred CCceecccCCCCCeehHHHHHHhCCCceEEEEECCCCCCccHHHHHHHHHHHHHHhcCC-----CEEEEeCCchHHHHHH
Confidence 35788999999999999998877888 9999999999999999999999999998884 4599999999999999
Q ss_pred HHHHHcCCeEEEEecCC-CCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCCCCCCcchHhhhhchH
Q 024040 86 FIAASRGYKLIIIMPST-YSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTG 164 (273)
Q Consensus 86 ~~a~~~g~~~~i~~p~~-~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~ 164 (273)
++|+++|++|+||||++ ++..|+++++.+||+|+.+++ +++++.+.+++++++. +.+|+++ +||.++ .||.|++
T Consensus 96 ~~a~~~G~~~~i~~p~~~~~~~k~~~~~~~GA~v~~v~~--~~~~~~~~a~~l~~~~-~~~~~~~-~n~~~~-~g~~t~~ 170 (352)
T 2zsj_A 96 AYAARAGLRAYVLLPKGAVAIGKLSQAMIYGAKVLAIQG--TFDDALNIVRKIGENF-PVEIVNS-VNPYRI-EGQKTAA 170 (352)
T ss_dssp HHHHHHTCEEEEEEEGGGCCHHHHHHHHHTTCEEEEESS--CHHHHHHHHHHHHHHS-SEEECST-TCTHHH-HHHTHHH
T ss_pred HHHHhcCCcEEEEECCCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHHc-CcEECCC-CCcchh-hhHhHHH
Confidence 99999999999999997 999999999999999999986 4899999999999887 5888887 899988 5999999
Q ss_pred HHHHHhhCCCcCEEEEecCCCccHHHHHHHHHhhCC------CcEEEEEecCCCccccCCCC---CCccccccCCCCCc-
Q 024040 165 PEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNP------NIKVYGIEPSESAVLNGGQP---GKHLIQGIGAGVIP- 234 (273)
Q Consensus 165 ~Ei~~q~~~~~d~iv~p~G~Gg~~~Gi~~~~k~~~~------~~~vigVe~~~~~~~~~~~~---~~~~~~glg~~~~~- 234 (273)
+||++|++..||+||+|+|+||+++|++.++|+.++ .+||++|||.+++++..+.+ ..+.+++++.+...
T Consensus 171 ~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~~~vigve~~~~~~~~~g~~~~~~~t~a~gl~~~~~~~ 250 (352)
T 2zsj_A 171 FEICDTLGEAPDYHFIPVGNAGNITAYWKGFKIYYEEGKITKLPRMMGWQAEGAAPIVKGYPIKNPQTIATAIKIGNPYS 250 (352)
T ss_dssp HHHHHHHSSCCSEEEEECSSSHHHHHHHHHHHHHHHTTSCSSCCEEEEEEETTBCHHHHTSCCSSCCCSCGGGCCSSCTT
T ss_pred HHHHHHcCCCCCEEEEeCCCcHHHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCcHHhcCCccCCCcchhHHhcCCCCCc
Confidence 999999976799999999999999999999998753 68999999999987755543 23567888876421
Q ss_pred cc----ccccCCCeEEEeCHHHHHHHHHHHHHHcCceecccC
Q 024040 235 PV----LDVAMLDEVITVSSEEAIETSKLLALKEGLLRQLLY 272 (273)
Q Consensus 235 ~~----~~~~~~d~~v~v~d~e~~~a~~~l~~~eGi~~~ps~ 272 (273)
+. +.+++.|+++.|+|+|+++++++|++++|+++|||+
T Consensus 251 ~~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~~gi~~epss 292 (352)
T 2zsj_A 251 WKSALKAAQESGGKIDAVSDSEILYAYKLIASTEGVFCEPAS 292 (352)
T ss_dssp HHHHHHHHHHHTCEEEEECHHHHHHHHHHHHHHHCCCBCHHH
T ss_pred HHHHHHHHHHhCCeEEEECHHHHHHHHHHHHHhCCeeECchH
Confidence 11 234678899999999999999999999999999986
No 26
>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A
Probab=100.00 E-value=6.2e-54 Score=397.64 Aligned_cols=258 Identities=19% Similarity=0.228 Sum_probs=223.3
Q ss_pred hccCCCcceeccccc----CCC----CceEEEEeCCCCC-CCchhhHHHHHHHHH-----HHHcCCCCCCC---------
Q 024040 13 ELIGHTPMVYLNNVV----DGC----VARIAAKLEMMQP-CSSVKDRIAYSMIKD-----AEDKGLITPGK--------- 69 (273)
Q Consensus 13 ~~~~~TPl~~~~~l~----~~~----g~~l~~K~E~~~p-tGS~K~R~a~~~~~~-----a~~~g~~~~g~--------- 69 (273)
.++++|||+++++|+ +.+ +.+||+|+|++|| |||||+|++.+++.. +++.|.+.||.
T Consensus 74 ~g~~~TPL~~~~~l~~~l~~~~g~~~~~~v~lK~E~~~p~tGSfK~Rga~~~i~~l~~~~a~~~G~l~~g~~~~~l~~~~ 153 (442)
T 3ss7_X 74 GGIIESELVAIPAMQKRLEKEYQQPISGQLLLKKDSHLPISGSIKARGGIYEVLAHAEKLALEAGLLTLDDDYSKLLSPE 153 (442)
T ss_dssp TTCCCCCEEECHHHHHHHHHHHTCCCCSEEEEEEGGGCTTTSBTHHHHHHHHHHHHHHHHHHHTTSCCTTSCGGGGGSHH
T ss_pred CCCCCCCcEEhHhhhhHHHHhhCCCcCCeEEEeecCCCCCCCCcHHHHHHHHHHHHhHHHHHHcCCCCCCcchhhhhhhh
Confidence 456899999999887 554 4799999999999 999999999999986 78899888876
Q ss_pred -------eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCC
Q 024040 70 -------TVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTP 142 (273)
Q Consensus 70 -------~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~ 142 (273)
.+||++|+||||+|+|++|+++|++|+||||++++..|+++++.+||+|+.+++ +++++.+.+++++++.+
T Consensus 154 ~r~~~~~~~vv~aSsGNhg~avA~~aa~~G~~~~Ivmp~~~~~~k~~~~r~~GA~Vv~v~~--~~~~a~~~a~~~a~~~~ 231 (442)
T 3ss7_X 154 FKQFFSQYSIAVGSTGNLGLSIGIMSARIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQ--DYGVAVEEGRKAAQSDP 231 (442)
T ss_dssp HHHHHHTSEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEESS--CHHHHHHHHHHHHHTCT
T ss_pred hhhhccCcEEEEECCCHHHHHHHHHHHHhCCcEEEEECCCCCHHHHHHHHHCCCEEEEECC--CHHHHHHHHHHHHHhCC
Confidence 369999999999999999999999999999999999999999999999999985 58999999999998876
Q ss_pred CeEeeCCCCCCcchHhhhhchHHHHHHhhCC--------CcCEEEEecCCCccHHHHHHHHHhh-CCCcEEEEEecCCCc
Q 024040 143 NGYILGQFENPANPEIHYETTGPEIWNDSGG--------KVDAFIAGIGTGGTVTGAGRFLKEK-NPNIKVYGIEPSESA 213 (273)
Q Consensus 143 ~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~--------~~d~iv~p~G~Gg~~~Gi~~~~k~~-~~~~~vigVe~~~~~ 213 (273)
+++|++++ |+.++.+||.|++.||++|++. .||+||+|+|+||+++|++.+||+. +++++||+|||++++
T Consensus 232 ~~~~i~~~-n~~~~~~G~~t~g~Ei~eQl~~~g~~vD~~~Pd~VvvpvG~GG~~aGi~~~lk~~~~~~v~vigVep~~~~ 310 (442)
T 3ss7_X 232 NCFFIDDE-NSRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYLPCGVGGGPGGVAFGLKLAFGDHVHCFFAEPTHSP 310 (442)
T ss_dssp TEEECCTT-TCHHHHHHHHHHHHHHHHHHHHHTCCCBTTBCEEEEEECSSSHHHHHHHHHHHHHHGGGEEEEEEEETTCC
T ss_pred CceeCCCC-ChHHHHHHHHHHHHHHHHHHHhhcCcccccCCCEEEEEeCCchHHHHHHHHHHHhcCCCCEEEEEEeCCch
Confidence 78899885 5555558999999999999842 3669999999999999999999987 799999999999998
Q ss_pred ccc----CCCC-----------CCccccccCCCCCc---ccccccCCCeEEEeCHHHHHHHHHHHHHHcCceecccCC
Q 024040 214 VLN----GGQP-----------GKHLIQGIGAGVIP---PVLDVAMLDEVITVSSEEAIETSKLLALKEGLLRQLLYE 273 (273)
Q Consensus 214 ~~~----~~~~-----------~~~~~~glg~~~~~---~~~~~~~~d~~v~v~d~e~~~a~~~l~~~eGi~~~ps~~ 273 (273)
++. .+.+ ..+.+++|+++... +.+.++++|+++.|+|+|+++++++|+++|||++|||+.
T Consensus 311 ~~~~~~~~G~~~~~~v~~~g~~~~TiAdgl~v~~~~~~~~~~~~~~~d~~~~Vsd~e~~~a~~~L~~~eGi~~epssa 388 (442)
T 3ss7_X 311 CMLLGVHTGLHDQISVQDIGIDNLTAADGLAVGRASGFVGRAMERLLDGFYTLSDQTMYDMLGWLAQEEGIRLEPSAL 388 (442)
T ss_dssp HHHHHHHHSCGGGCBGGGGTCCCCCSCGGGCCSBCCSSHHHHHGGGCCEEEEECHHHHHHHHHHHHHHHCCCCCGGGG
T ss_pred HHHHHHhcCCCceeeeccCCCchhhHHhhcCCCCCchhHHHHHHhhCCeEEEECHHHHHHHHHHHHHHCCCeEcHHHH
Confidence 642 2221 24566777776422 234568899999999999999999999999999999973
No 27
>3iau_A Threonine deaminase; pyridoxal phosphate, amino-acid biosynthesis, defensive PROT jasmonic acid pathway, jasmonic acid,structural genomics; HET: LLP 15P; 2.35A {Solanum lycopersicum}
Probab=100.00 E-value=4.3e-55 Score=397.05 Aligned_cols=254 Identities=22% Similarity=0.284 Sum_probs=225.9
Q ss_pred HHhhccCCCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHH
Q 024040 10 DVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAA 89 (273)
Q Consensus 10 ~i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~ 89 (273)
++...+++|||+++++|++.+|.+||+|+|++|||||||||++.+++.++.+++. ..+||++|+||||+|+|++|+
T Consensus 53 ~i~~~i~~TPL~~l~~l~~~~g~~i~~K~E~~~ptgSfKdRga~~~i~~l~~~~~----~~~vv~assGN~g~a~A~aa~ 128 (366)
T 3iau_A 53 PVYDVAIESPLELAEKLSDRLGVNFYIKREDKQRVFSFKLRGAYNMMSNLSREEL----DKGVITASAGNHAQGVALAGQ 128 (366)
T ss_dssp CGGGTCCCCCEEECHHHHHHHTSEEEEEEGGGSTTSBTTHHHHHHHHHTSCHHHH----HHCEEEECSSHHHHHHHHHHH
T ss_pred HHhhhcCCCCcEEhhhhhHhhCCEEEEEecCCCCCcchHHHHHHHHHHHHHHhCC----CCEEEEeCCCHHHHHHHHHHH
Confidence 5678899999999999998889999999999999999999999999987643321 234999999999999999999
Q ss_pred HcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCCCCCCcchHhhhhchHHHHHH
Q 024040 90 SRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWN 169 (273)
Q Consensus 90 ~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~ 169 (273)
++|++|+||||++++..|+++++.+||+|+.+++ +|+++.+.+++++++. +++|++||+||.++ +||.|++.||++
T Consensus 129 ~~G~~~~iv~P~~~~~~k~~~~~~~GA~V~~v~~--~~~~~~~~a~~~~~~~-~~~~i~~~~n~~~i-~g~~t~~~Ei~~ 204 (366)
T 3iau_A 129 RLNCVAKIVMPTTTPQIKIDAVRALGGDVVLYGK--TFDEAQTHALELSEKD-GLKYIPPFDDPGVI-KGQGTIGTEINR 204 (366)
T ss_dssp HTTCCEEEEECTTCCHHHHHHHHHTTCEEEECCS--SHHHHHHHHHHHHHHH-TCEECCSSSSHHHH-HHHHHHHHHHHH
T ss_pred HhCCceEEEeCCCCCHHHHHHHHHCCCeEEEECc--CHHHHHHHHHHHHHhc-CCEecCCCCChHHH-HHHHHHHHHHHH
Confidence 9999999999999999999999999999999984 5899999999998886 78999999999988 699999999999
Q ss_pred hhCCCcCEEEEecCCCccHHHHHHHHHhhCCCcEEEEEecCCCcccc----CCCC-----CCccccccCCCCC---cccc
Q 024040 170 DSGGKVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLN----GGQP-----GKHLIQGIGAGVI---PPVL 237 (273)
Q Consensus 170 q~~~~~d~iv~p~G~Gg~~~Gi~~~~k~~~~~~~vigVe~~~~~~~~----~~~~-----~~~~~~glg~~~~---~~~~ 237 (273)
|+ +.+|+||+|+|+||+++|++.++|+.+++++|++|||.+++++. .+.+ ..+.+++++.+.. ++.+
T Consensus 205 q~-~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigVe~~~~~~l~~~~~~g~~~~~~~~~tia~gl~~~~~~~~~~~~ 283 (366)
T 3iau_A 205 QL-KDIHAVFIPVGGGGLIAGVATFFKQIAPNTKIIGVEPYGAASMTLSLHEGHRVKLSNVDTFADGVAVALVGEYTFAK 283 (366)
T ss_dssp HC-CSEEEEEEECSSSHHHHHHHHHHHHHSTTSEEEEEEEGGGCHHHHHHHHTSCCEESCCCCSSGGGCCSSCCHHHHHH
T ss_pred hc-CCCCEEEEccCchHHHHHHHHHHHHhCCCCeEEEEeecCChHHHHHHHcCCCCcCCCccchhhhhcCCCCcHHHHHH
Confidence 99 68999999999999999999999999999999999999998654 2332 2455677776543 3345
Q ss_pred cccCCCeEEEeCHHHHHHHHHHHHHHcCceecccC
Q 024040 238 DVAMLDEVITVSSEEAIETSKLLALKEGLLRQLLY 272 (273)
Q Consensus 238 ~~~~~d~~v~v~d~e~~~a~~~l~~~eGi~~~ps~ 272 (273)
.++++|+++.|+|+|+.+++++|++++|+++||++
T Consensus 284 ~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~ep~s 318 (366)
T 3iau_A 284 CQELIDGMVLVANDGISAAIKDVYDEGRNILETSG 318 (366)
T ss_dssp HHHHCCEEEEECHHHHHHHHHHHHHHHSCCCCHHH
T ss_pred HHhcCCCceeECHHHHHHHHHHHHHHcCcEEcHHH
Confidence 67889999999999999999999999999999985
No 28
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*
Probab=100.00 E-value=6.6e-55 Score=392.56 Aligned_cols=263 Identities=18% Similarity=0.198 Sum_probs=224.3
Q ss_pred hhhhhHHHhhccCCCcceecccccCCCCceEEEEeCCCCC--CCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeC--CCh
Q 024040 4 KCEIKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQP--CSSVKDRIAYSMIKDAEDKGLITPGKTVLIELT--SGN 79 (273)
Q Consensus 4 ~~~~~~~i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~p--tGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~s--sGN 79 (273)
.+..++++.+.+++|||+++++|++.+|++||+|+|++|| +||||+|++.+++.+++++|. ++||++| +||
T Consensus 19 ~~~a~~ri~~~~~~TPL~~~~~l~~~~g~~v~~K~E~l~p~~~gs~K~R~~~~~l~~a~~~G~-----~~vv~~s~tsGN 93 (342)
T 4d9b_A 19 HLTRFPRLEFIGAPTPLEYLPRLSDYLGREIYIKRDDVTPIAMGGNKLRKLEFLVADALREGA-----DTLITAGAIQSN 93 (342)
T ss_dssp GGGGSCCCCSSCSCCCEEECHHHHHHHTSCEEEEEGGGCSSTTCCTHHHHHHHHHHHHHHTTC-----CEEEEEEETTCH
T ss_pred hhccCCcccccCCCCceeEhhhhHHhhCCEEEEEeCCCCCCCCcchHHHhHHHHHHHHHHcCC-----CEEEEcCCcccH
Confidence 3566788999999999999999988888999999999999 999999999999999999885 3599996 799
Q ss_pred HHHHHHHHHHHcCCeEEEEecCCCCH--------HHHHHHHHcCCEEEEeCCCCChhHHH-HHHHHHHHhCCCeEee-CC
Q 024040 80 TGIGLAFIAASRGYKLIIIMPSTYSI--------ERRIILRALGAEVYLADPAVGFEGFV-KKGEEILNRTPNGYIL-GQ 149 (273)
Q Consensus 80 ~g~a~A~~a~~~g~~~~i~~p~~~~~--------~~~~~~~~~Ga~v~~~~~~~~~~~~~-~~a~~~~~~~~~~~~~-~~ 149 (273)
||+|+|++|+++|++|+||||++++. .|++.++.+||+|+.+++..+++++. +.+++++++.+..|++ .+
T Consensus 94 ~g~alA~aa~~~G~~~~iv~p~~~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~p~~ 173 (342)
T 4d9b_A 94 HVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCDALTDPDAQLQTLATRIEAQGFRPYVIPVG 173 (342)
T ss_dssp HHHHHHHHHHHHTCEEEEEEECTTCCCCHHHHHSHHHHHHHHTTCEEEECSCCSSHHHHHHHHHHHHHHTTCCEEECCGG
T ss_pred HHHHHHHHHHHhCCcEEEEEeCCCCCccccccccchHHHHHHCCCEEEEECchhhHHHHHHHHHHHHHhcCCceEEeCCC
Confidence 99999999999999999999988773 59999999999999998765555555 4566776665333332 34
Q ss_pred CCCCcchHhhhhchHHHHHHhhC--CCcCEEEEecCCCccHHHHHHHHHhhCCCcEEEEEecCCCccccCCCC---CCcc
Q 024040 150 FENPANPEIHYETTGPEIWNDSG--GKVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLNGGQP---GKHL 224 (273)
Q Consensus 150 ~~~~~~~~~g~~t~~~Ei~~q~~--~~~d~iv~p~G~Gg~~~Gi~~~~k~~~~~~~vigVe~~~~~~~~~~~~---~~~~ 224 (273)
+.|+.++ .||.|++.||++|++ ..+|+||+|+|+|||++|++.++|+.+|++|||+|||++++.+..... .++.
T Consensus 174 ~~n~~~~-~G~~t~~~EI~~q~~~~~~~d~vv~~vGtGGt~aGi~~~~k~~~~~~~vigVe~~~~~~~~~~~~~~~~~t~ 252 (342)
T 4d9b_A 174 GSSALGA-MGYVESALEIAQQCEEVVGLSSVVVASGSAGTHAGLAVGLEHLMPDVELIGVTVSRSVAEQKPKVIALQQAI 252 (342)
T ss_dssp GCSHHHH-HHHHHHHHHHHHHHTTTCCCCEEEEEESSSHHHHHHHHHHHHHCTTSEEEEEESSSCHHHHHHHHHHHHHHH
T ss_pred CCChHHH-HHHHHHHHHHHHHHhccCCCCEEEEeCCCCHHHHHHHHHHHhhCCCCeEEEEEecCcHHHHHHHHHHHHHHH
Confidence 4566665 599999999999996 479999999999999999999999999999999999999986543221 2345
Q ss_pred ccccCC-CCCcccccccCCCeEEEeCHHHHHHHHHHHHHHcCceecccC
Q 024040 225 IQGIGA-GVIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLRQLLY 272 (273)
Q Consensus 225 ~~glg~-~~~~~~~~~~~~d~~v~v~d~e~~~a~~~l~~~eGi~~~ps~ 272 (273)
+++|+. +..++.+.++++|+++.|+|+|+++++++|++++||++||||
T Consensus 253 a~gl~~~~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~~gi~~epsY 301 (342)
T 4d9b_A 253 AGQLALTATADIHLWDDYFAPGYGVPNDAGMEAVKLLASLEGVLLDPVY 301 (342)
T ss_dssp HHHTTCCCCCCCEEECTTSTTCTTCCCHHHHHHHHHHHHHHSCCCCTTT
T ss_pred HHHcCCCCccceEEEecCCCceEecCCHHHHHHHHHHHHhcCccccccH
Confidence 677877 556777888999999999999999999999999999999983
No 29
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=100.00 E-value=8.2e-55 Score=391.98 Aligned_cols=261 Identities=20% Similarity=0.179 Sum_probs=224.4
Q ss_pred hhhHHHhhccCCCcceecccccCCC-C-ceEEEEeCCCC-C--CCchhhHHHHHHHHHHHHcCCCCCCCeEEEe--eCCC
Q 024040 6 EIKKDVTELIGHTPMVYLNNVVDGC-V-ARIAAKLEMMQ-P--CSSVKDRIAYSMIKDAEDKGLITPGKTVLIE--LTSG 78 (273)
Q Consensus 6 ~~~~~i~~~~~~TPl~~~~~l~~~~-g-~~l~~K~E~~~-p--tGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~--~ssG 78 (273)
+.++++...+++|||+++++|++.+ | .+||+|+|++| | +||||+|++.+++.++.++|. ++||+ +|+|
T Consensus 4 ~~~~~i~~~~~~TPL~~~~~l~~~~~g~~~i~~K~E~~n~p~~~Gs~K~R~a~~~l~~a~~~g~-----~~vv~~G~ssG 78 (341)
T 1f2d_A 4 AKFAKYPLTFGPSPISNLNRLSQHLGSKVNVYAKREDCNSGLAFGGNKLRKLEYIVPDIVEGDY-----THLVSIGGRQS 78 (341)
T ss_dssp TSSCCCCCSSSSCCEEECHHHHHHTTTCSEEEEEEGGGSCSSTTCCHHHHHHTTTHHHHHHSCC-----SEEEEEEETTC
T ss_pred ccCCCcccCCCCCcceeHHhHHHhhCCCceEEEEeCCCCCCCCCCchHHHHHHHHHHHHHHcCC-----CEEEEcCCcch
Confidence 4567789999999999999998887 7 89999999999 9 999999999999999998885 35999 9999
Q ss_pred hHHHHHHHHHHHcCCeEEEEecCCCC-----HH------HHHHHHHcCCEEEEeCCCCCh---hHHHHHHHHHHHhCCCe
Q 024040 79 NTGIGLAFIAASRGYKLIIIMPSTYS-----IE------RRIILRALGAEVYLADPAVGF---EGFVKKGEEILNRTPNG 144 (273)
Q Consensus 79 N~g~a~A~~a~~~g~~~~i~~p~~~~-----~~------~~~~~~~~Ga~v~~~~~~~~~---~~~~~~a~~~~~~~~~~ 144 (273)
|||+|+|++|+++|++|+||||++++ +. |+++++.+||+|+.+++..+. +++.+.+++++++.+..
T Consensus 79 N~g~alA~~a~~~G~~~~iv~p~~~~~~~~~~~~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~~~~a~~l~~~~~~~ 158 (341)
T 1f2d_A 79 NQTRMVAALAAKLGKKCVLIQEDWVPIPEAEKDVYNRVGNIELSRIMGADVRVIEDGFDIGMRKSFANALQELEDAGHKP 158 (341)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEECCSCCCGGGTTTTTTSHHHHHHHHTTCEEEECCCCCCSSCCHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHHhCCceEEEeccCCCccccccccccccccHHHHHhCCCEEEEeCCccchhHHHHHHHHHHHHHhcCCcE
Confidence 99999999999999999999999887 33 999999999999999865322 35777888888876434
Q ss_pred E-eeCC-CCCCcchHhhhhchHHHHHHhhC---CCcCEEEEecCCCccHHHHHHHHHhhCCCcEEEEEecCCCccccCCC
Q 024040 145 Y-ILGQ-FENPANPEIHYETTGPEIWNDSG---GKVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLNGGQ 219 (273)
Q Consensus 145 ~-~~~~-~~~~~~~~~g~~t~~~Ei~~q~~---~~~d~iv~p~G~Gg~~~Gi~~~~k~~~~~~~vigVe~~~~~~~~~~~ 219 (273)
+ +.++ |+||.++ .||.|++.||++|++ ..||+||+|+|+|||++|++.+||+.++++|||+|||.+++.+....
T Consensus 159 ~~i~~~~~~np~~~-~G~~t~~~Ei~~q~~~~~~~~d~vv~~vGtGgt~~Gi~~~~k~~~~~~~vigVe~~~~~~~~~~~ 237 (341)
T 1f2d_A 159 YPIPAGCSEHKYGG-LGFVGFADEVINQEVELGIKFDKIVVCCVTGSTTAGILAGMAQYGRQDDVIAIDASFTSEKTKEQ 237 (341)
T ss_dssp EEECGGGTTSTTTT-THHHHHHHHHHHHHHHHTCCCSEEEEEESSSHHHHHHHHHHGGGTCGGGEEEEECSSCHHHHHHH
T ss_pred EEeCCCcCCCCccH-HHHHHHHHHHHHHHHhcCCCCCEEEEecCchHhHHHHHHHHHhcCCCceEEEEEecCchHHHHHH
Confidence 4 4578 9999999 499999999999995 47999999999999999999999999999999999999998764321
Q ss_pred C---CCccccccCCCC--CcccccccCCCeEEEeCHHHHHHHHHHHHHHcCceecccC
Q 024040 220 P---GKHLIQGIGAGV--IPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLRQLLY 272 (273)
Q Consensus 220 ~---~~~~~~glg~~~--~~~~~~~~~~d~~v~v~d~e~~~a~~~l~~~eGi~~~ps~ 272 (273)
. .++.+++++.+. .++.+.++++|+++.|+|+|+++++++|+++|||++||+|
T Consensus 238 ~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~egi~~ep~~ 295 (341)
T 1f2d_A 238 TLRIANNTAKLIGVEHEFKDFTLDTRFAYPCYGVPNEGTIEAIRTCAEQEGVLTDPVY 295 (341)
T ss_dssp HHHHHHHHHHHHTCCCCCSCCCEECTTSTTBTTBCCHHHHHHHHHHHHHHSCCCCTTT
T ss_pred HHHHHHHHHHHcCCCCCcCeEEEecCcccceEecCCHHHHHHHHHHHHHcCCccccch
Confidence 1 123345666442 3446778899999999999999999999999999999963
No 30
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=100.00 E-value=3.1e-54 Score=385.76 Aligned_cols=260 Identities=20% Similarity=0.199 Sum_probs=224.0
Q ss_pred hhhhHHHhhccCCCcceecccccCCCCceEEEEeCCCCC--CCchhhHHHHHHHHHHHHcCCCCCCCeEEEee--CCChH
Q 024040 5 CEIKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQP--CSSVKDRIAYSMIKDAEDKGLITPGKTVLIEL--TSGNT 80 (273)
Q Consensus 5 ~~~~~~i~~~~~~TPl~~~~~l~~~~g~~l~~K~E~~~p--tGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~--ssGN~ 80 (273)
++.++++.+.+++|||+++++|++..|++||+|+|++|| +||||+|++.+++.+++++|. . +||++ |+|||
T Consensus 9 l~~~~~i~~~~~~TPL~~~~~l~~~~g~~i~~K~E~~~p~~~gs~K~R~~~~~i~~a~~~G~----~-~vv~~G~ssGN~ 83 (325)
T 1j0a_A 9 LAKFPRVELIPWETPIQYLPNISREIGADVYIKRDDLTGLGIGGNKIRKLEYLLGDALSKGA----D-VVITVGAVHSNH 83 (325)
T ss_dssp HTTCCCCCCCCSCCCEEECHHHHHHHTSEEEEEEGGGSCSTTCSTHHHHHHHHHHHHHHTTC----S-EEEEECCTTCHH
T ss_pred hccCCCcccccCCCCceEhhhhhhhhCCEEEEEecccCCCCCCchHHHHHHHHHHHHHHcCC----C-EEEEcCCcchHH
Confidence 456678899999999999999988778999999999999 999999999999999999985 3 49997 99999
Q ss_pred HHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeCCCCCh---hHHHHHHHHHHHhCCCeE-eeCCCCCCcc
Q 024040 81 GIGLAFIAASRGYKLIIIMPSTY-SIERRIILRALGAEVYLADPAVGF---EGFVKKGEEILNRTPNGY-ILGQFENPAN 155 (273)
Q Consensus 81 g~a~A~~a~~~g~~~~i~~p~~~-~~~~~~~~~~~Ga~v~~~~~~~~~---~~~~~~a~~~~~~~~~~~-~~~~~~~~~~ 155 (273)
|+|+|++|+++|++|+||||+++ +..|+++++.+||+|+.+++..+. +++.+.+++++++.+..+ +..++.|+.+
T Consensus 84 g~alA~~a~~~G~~~~iv~p~~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~p~~~~n~~~ 163 (325)
T 1j0a_A 84 AFVTGLAAKKLGLDAILVLRGKEELKGNYLLDKIMGIETRVYDAKDSFELMKYAEEIAEELKREGRKPYVIPPGGASPIG 163 (325)
T ss_dssp HHHHHHHHHHTTCEEEEEEESCCCSCHHHHHHHHTTCEEEEESCCSTTTHHHHHHHHHHHHTTSSCCEEEECGGGCSHHH
T ss_pred HHHHHHHHHHhCCcEEEEECCCCCCCchHHHHHHCCCEEEEeCcchhhhhhHHHHHHHHHHHHcCCceEEEcCCCCCHHH
Confidence 99999999999999999999999 999999999999999999875332 257788888887764433 4566788888
Q ss_pred hHhhhhchHHHHHHhhCCCcCEEEEecCCCccHHHHHHHHHhhCCCcEEEEEecCCCccccCCCC---CCccccccC-CC
Q 024040 156 PEIHYETTGPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLNGGQP---GKHLIQGIG-AG 231 (273)
Q Consensus 156 ~~~g~~t~~~Ei~~q~~~~~d~iv~p~G~Gg~~~Gi~~~~k~~~~~~~vigVe~~~~~~~~~~~~---~~~~~~glg-~~ 231 (273)
++ ||.|++.||++|++..+|+||+|+|+|||++|+++++|+.++++|||+|||.+++.+..... .+....+++ .+
T Consensus 164 ~~-g~~t~~~Ei~~q~~~~~d~vv~~vGtGGt~~Gi~~~lk~~~~~~~vigVe~~~~~~~~~~~~~t~~~~~~~~~g~~~ 242 (325)
T 1j0a_A 164 TL-GYVRAVGEIATQSEVKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGIAVGRFGEVMTSKLDNLIKEAAELLGVKV 242 (325)
T ss_dssp HT-HHHHHHHHHHHHCCCCCSEEEEEESSSHHHHHHHHHHHHTTCCCEEEEEECSSCSSSHHHHHHHHHHHHHHHTTCCC
T ss_pred HH-HHHHHHHHHHHhhCCCCCEEEEeCCchHhHHHHHHHHHhcCCCceEEEEEecCchHHHHHHHHHHHHHHHHhcCCCC
Confidence 84 89999999999997689999999999999999999999999999999999999976643211 112223455 33
Q ss_pred CCcccccccCCCeEEEeCHHHHHHHHHHHHHHcCceeccc
Q 024040 232 VIPPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLRQLL 271 (273)
Q Consensus 232 ~~~~~~~~~~~d~~v~v~d~e~~~a~~~l~~~eGi~~~ps 271 (273)
..|+.++++++|+ +.|+|+|+++++++|+++|||++||+
T Consensus 243 ~~~~~~~~~~~~~-~~v~d~e~~~a~~~l~~~~gi~~ep~ 281 (325)
T 1j0a_A 243 EVRPELYDYSFGE-YGKITGEVAQIIRKVGTREGIILDPV 281 (325)
T ss_dssp CSCCEEEECSTTS-TTCCCHHHHHHHHHHHHHHSCCCCTT
T ss_pred CCCcEEecCcccC-CCCCCHHHHHHHHHHHHhhCcccccc
Confidence 4577788899999 99999999999999999999999996
No 31
>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*
Probab=100.00 E-value=1.4e-52 Score=384.44 Aligned_cols=257 Identities=18% Similarity=0.171 Sum_probs=217.0
Q ss_pred hccCCCcceecccccCCCC-ceEEEEeCCCC-CCCchhhHHHHHHHHHHHH--cCC----C--------CCCCeEEEeeC
Q 024040 13 ELIGHTPMVYLNNVVDGCV-ARIAAKLEMMQ-PCSSVKDRIAYSMIKDAED--KGL----I--------TPGKTVLIELT 76 (273)
Q Consensus 13 ~~~~~TPl~~~~~l~~~~g-~~l~~K~E~~~-ptGS~K~R~a~~~~~~a~~--~g~----~--------~~g~~~vv~~s 76 (273)
..+++|||+++++|++.+| .+||+|+|++| ||||||+|++.+++.++.+ .|. + .+...+||++|
T Consensus 40 ~~~~~TPL~~~~~l~~~~g~~~i~~K~E~~~~ptgSfK~Rga~~~i~~~~~~~~G~~~~~l~~e~l~~~~~~~~~vv~aS 119 (398)
T 4d9i_A 40 AGYRPTPLCALDDLANLFGVKKILVKDESKRFGLNAFXMLGGAYAIAQLLCEKYHLDIETLSFEHLKNAIGEKMTFATTT 119 (398)
T ss_dssp TTCCCCCEEECHHHHHHHTSSEEEEEEGGGSTTTTBSTHHHHHHHHHHHHHHHHTCCGGGCCHHHHHHCCSCCCEEEEEC
T ss_pred CCCCCCCceehHHHHHHhCCCcEEEEECCCCCCCCcchhhhhHHHHHHHHHHhhcccccccchhhhhhhccCCCEEEEEC
Confidence 4689999999999998888 59999999999 9999999999999999842 231 0 12231599999
Q ss_pred CChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCC-----CC
Q 024040 77 SGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQ-----FE 151 (273)
Q Consensus 77 sGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~-----~~ 151 (273)
+||||+|+|++|+++|++|+||||++++..|+++++.+||+|+.+++ +++++.+.+++++++. +++|++| |+
T Consensus 120 sGNhg~a~A~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vv~v~~--~~~~a~~~a~~~~~~~-g~~~v~~~~~~g~~ 196 (398)
T 4d9i_A 120 DGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAECIVTDM--NYDDTVRLTMQHAQQH-GWEVVQDTAWEGYT 196 (398)
T ss_dssp SSHHHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHHTTTCEEEECSS--CHHHHHHHHHHHHHHH-TCEECCSSCBTTBC
T ss_pred CCHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHHc-CCEEecCcccCCcC
Confidence 99999999999999999999999999999999999999999999986 5899999999998887 7899986 65
Q ss_pred -CCcchHhhhhchHHHHHHhhCCC---cCEEEEecCCCccHHHHHHHHHhh--CCCcEEEEEecCCCcccc----CCCC-
Q 024040 152 -NPANPEIHYETTGPEIWNDSGGK---VDAFIAGIGTGGTVTGAGRFLKEK--NPNIKVYGIEPSESAVLN----GGQP- 220 (273)
Q Consensus 152 -~~~~~~~g~~t~~~Ei~~q~~~~---~d~iv~p~G~Gg~~~Gi~~~~k~~--~~~~~vigVe~~~~~~~~----~~~~- 220 (273)
|+.+..+||.|++.||++|++.. ||+||+|+|+||+++|++.++|+. .+.++||+|||++++++. .+++
T Consensus 197 ~~~~~~~~G~~t~~~Ei~~q~~~~g~~~d~vvvpvG~GG~~aGi~~~~k~~~~~~~~~vigVep~~~~~~~~s~~~g~~~ 276 (398)
T 4d9i_A 197 KIPTWIMQGYATLADEAVEQMREMGVTPTHVLLQAGVGAMAGGVLGYLVDVYSPQNLHSIIVEPDKADCIYRSGVKGDIV 276 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEECSSSHHHHHHHHHHHHHHCTTSCEEEEEEETTSCHHHHHHHHTSCC
T ss_pred CCCchhhhhHHHHHHHHHHHhhhcCCCCCEEEEecCccHHHHHHHHHHHHhcCCCCCEEEEEEeCCCchHHHHHHcCCce
Confidence 34455579999999999999544 999999999999999999999876 467999999999998764 3333
Q ss_pred -----CCccccccCCCCCc---ccccccCCCeEEEeCHHHHHHHHHHHHHHcC----ceecccC
Q 024040 221 -----GKHLIQGIGAGVIP---PVLDVAMLDEVITVSSEEAIETSKLLALKEG----LLRQLLY 272 (273)
Q Consensus 221 -----~~~~~~glg~~~~~---~~~~~~~~d~~v~v~d~e~~~a~~~l~~~eG----i~~~ps~ 272 (273)
..+.+++++++... +.+.++++|+++.|+|+|+++++++|+++|| |++|||+
T Consensus 277 ~~~~~~~tia~gl~~~~p~~~~~~~~~~~~d~~~~V~d~e~~~a~~~l~~~eG~~~~i~~epss 340 (398)
T 4d9i_A 277 NVGGDMATIMAGLACGEPNPLGWEILRNCATQFISCQDSVAALGMRVLGNPYGNDPRIISGESG 340 (398)
T ss_dssp CC------CCTTCCCSSCCHHHHHHHHHHCCEEEEECTHHHHHHHHHHHSCSTTCCCCCCCHHH
T ss_pred ecCCCCCceeccccCCCCCHHHHHHHHHcCCeEEEECHHHHHHHHHHHHHhhCCCCcEEECchH
Confidence 23456677665322 2334688999999999999999999999999 9999985
No 32
>1wkv_A Cysteine synthase; homodimer, open alpha/beta folding, transferase; HET: PLP; 2.00A {Aeropyrum pernix} SCOP: c.79.1.1
Probab=100.00 E-value=6e-51 Score=371.20 Aligned_cols=243 Identities=24% Similarity=0.291 Sum_probs=210.3
Q ss_pred cCCCcceecccccCCCCceEEEEeCCCCC-CCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCC
Q 024040 15 IGHTPMVYLNNVVDGCVARIAAKLEMMQP-CSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGY 93 (273)
Q Consensus 15 ~~~TPl~~~~~l~~~~g~~l~~K~E~~~p-tGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~ 93 (273)
..+|||+++++|++. |.+||+|+|++|| |||||+|++.+++..+. +.+++| .+|+++|+||||+|+|++|+++|+
T Consensus 94 ~~~TPL~~l~~Ls~~-g~~IylK~E~lnp~tGS~K~R~a~~~i~~l~--~a~~~g-~~Iv~assGNhG~AlA~aaa~~Gl 169 (389)
T 1wkv_A 94 GKPTPLVRSRLQLPN-GVRVWLKLEWYNPFSLSVKDRPAVEIISRLS--RRVEKG-SLVADATSSNFGVALSAVARLYGY 169 (389)
T ss_dssp SCSCCEEECCCCCST-TEEEEEEEGGGSTTTSBTTHHHHHHHHHHHT--TTSCTT-CEEEEECCHHHHHHHHHHHHHTTC
T ss_pred CCCCCeEEccccccC-CCeEEEEEcCCCCCcCChHHHHHHHHHHHHH--HHHhcC-CEEEEECCcHHHHHHHHHHHHcCC
Confidence 367999999999886 8899999999999 99999999999999855 334455 459999999999999999999999
Q ss_pred eEEEEecCCCCHHHHHHHHHcCCEEE-EeCCCCChhHHHHHHHHHHHhCCCeEeeCCCCCCcchHhhhhchHHHHHHhhC
Q 024040 94 KLIIIMPSTYSIERRIILRALGAEVY-LADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSG 172 (273)
Q Consensus 94 ~~~i~~p~~~~~~~~~~~~~~Ga~v~-~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~ 172 (273)
+|+||||+.++..|+.+|+.+||+|+ .++. .+++++++.+++++++. +.+|++||+||.++..||.|++.||++|+.
T Consensus 170 ~~~ivmp~~~~~~k~~~~~~~GAeVv~~v~~-~~~~da~~~a~~~~~~~-g~~~~~p~~N~~~~~~~~~t~g~Ei~~Q~~ 247 (389)
T 1wkv_A 170 RARVYLPGAAEEFGKLLPRLLGAQVIVDPEA-PSTVHLLPRVMKDSKNE-GFVHVNQFYNDANFEAHMRGTAREIFVQSR 247 (389)
T ss_dssp EEEEEEETTSCHHHHHHHHHTTCEEEEETTC-SSSGGGHHHHHHHHHHH-CCEECCTTTCHHHHHHHHHTHHHHHHHHHH
T ss_pred eEEEEECCCCCHHHHHHHHHcCCEEEEEcCC-CCHHHHHHHHHHHHHcc-CcEecCcCCChHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999 7773 35888999999988775 789999999998888899999999999994
Q ss_pred ---CCcCEEEEecCCCccHHHHHHHHHhhCCCcEEEEEecCCCccccCCCCCCccccccCCCCCcccccccCCC-eEEEe
Q 024040 173 ---GKVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLNGGQPGKHLIQGIGAGVIPPVLDVAMLD-EVITV 248 (273)
Q Consensus 173 ---~~~d~iv~p~G~Gg~~~Gi~~~~k~~~~~~~vigVe~~~~~~~~~~~~~~~~~~glg~~~~~~~~~~~~~d-~~v~v 248 (273)
..||+||+|+|+||+++|++.+|++..|++|||+|||.+++.+.+- ..+.. .|..+....+| +++.|
T Consensus 248 ~~g~~~D~vv~~vG~GG~~~Gi~~~~k~~~p~vrvigVe~~~~~~l~Gi-------~~i~~--~~~~~~~~~~dg~~~~V 318 (389)
T 1wkv_A 248 RGGLALRGVAGSLGTSGHMSAAAFYLQSVDPSIRAVLVQPAQGDSIPGI-------RRVET--GMLWINMLDISYTLAEV 318 (389)
T ss_dssp HTTCCEEEEEECCSSSHHHHHHHHHHHHHCTTCEEEEEEECTTCCCTTC-------CCGGG--CCSHHHHSCCCCEEEEE
T ss_pred hcCCCCCEEEEeCCchHhHHHHHHHHHHhCCCCeEEEEecCCCCccccc-------cccCC--cchhhhhheeccEEEEE
Confidence 3699999999999999999999999999999999999988655310 01111 12223345678 99999
Q ss_pred CHHHHHHHHHHHHHHcCceecccC
Q 024040 249 SSEEAIETSKLLALKEGLLRQLLY 272 (273)
Q Consensus 249 ~d~e~~~a~~~l~~~eGi~~~ps~ 272 (273)
+|+|+++++++|+++|||+++|||
T Consensus 319 sd~ea~~a~~~l~~~eGi~~~pss 342 (389)
T 1wkv_A 319 TLEEAMEAVVEVARSDGLVIGPSG 342 (389)
T ss_dssp CHHHHHHHHHHHHHHHSCCBCHHH
T ss_pred CHHHHHHHHHHHHHHcCCeEChHH
Confidence 999999999999999999999986
No 33
>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*
Probab=100.00 E-value=1.6e-52 Score=376.66 Aligned_cols=259 Identities=20% Similarity=0.216 Sum_probs=216.6
Q ss_pred hhhhHHHhhccCCCcceecccccCCC-C-ceEEEEeCCCC-C--CCchhhHHHHHHHHHHHHcCCCCCCCeEEEe--eCC
Q 024040 5 CEIKKDVTELIGHTPMVYLNNVVDGC-V-ARIAAKLEMMQ-P--CSSVKDRIAYSMIKDAEDKGLITPGKTVLIE--LTS 77 (273)
Q Consensus 5 ~~~~~~i~~~~~~TPl~~~~~l~~~~-g-~~l~~K~E~~~-p--tGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~--~ss 77 (273)
++.++++.+.+++|||+++++|++.+ | .+||+|+|++| | |||||+|++.+++.+++++|. .+||+ +|+
T Consensus 3 ~~~~~~i~~~~~~TPL~~~~~l~~~~~g~~~i~~K~E~~n~p~~~gs~K~R~a~~~l~~a~~~g~-----~~vv~~Gass 77 (338)
T 1tzj_A 3 LQRFPRYPLTFGPTPIQPLARLSKHLGGKVHLYAKREDCNSGLAFGGNKTRKLEYLIPEALAQGC-----DTLVSIGGIQ 77 (338)
T ss_dssp GGGSCCCCCSSSSCCEEECHHHHHHTTSSSEEEEEEGGGSCSSTTCCHHHHHHHTTHHHHHHTTC-----CEEEEEEETT
T ss_pred cccCCccccCCCCCccEEHHHHHHhhCCCceEEEEeCCCCCCCCCCchHHHHHHHHHHHHHHcCC-----CEEEEcCCch
Confidence 45567899999999999999998877 7 89999999996 8 999999999999999998885 35888 799
Q ss_pred ChHHHHHHHHHHHcCCeEEEEecCCCCHH--------HHHHHHHcCCEEEEeCCCCChhH-----HHHHHHHHHHhCCCe
Q 024040 78 GNTGIGLAFIAASRGYKLIIIMPSTYSIE--------RRIILRALGAEVYLADPAVGFEG-----FVKKGEEILNRTPNG 144 (273)
Q Consensus 78 GN~g~a~A~~a~~~g~~~~i~~p~~~~~~--------~~~~~~~~Ga~v~~~~~~~~~~~-----~~~~a~~~~~~~~~~ 144 (273)
||||+|+|++|+++|++|+||||++++.. |+++++.+||+|+.+++. +++ +.+.+++++++.+..
T Consensus 78 GN~g~alA~~a~~~G~~~~iv~p~~~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~--~~~~~~~~~~~~a~~l~~~~~~~ 155 (338)
T 1tzj_A 78 SNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIQMSRILGADVRLVPDG--FDIGFRRSWEDALESVRAAGGKP 155 (338)
T ss_dssp CHHHHHHHHHHHHHTCEEEEEEECCSSCCCTTTTTSHHHHHHHHTTCEEEECCC---------CHHHHHHHHHHHTTCCE
T ss_pred hHHHHHHHHHHHHhCCceEEEecCCCCccccccccCccHHHHHhCCCEEEEeCCc--chhhHHHHHHHHHHHHHhcCCce
Confidence 99999999999999999999999987764 999999999999999864 332 467778888776444
Q ss_pred Ee-eCC-CCCCcchHhhhhchHHHHHHhhC---CCcCEEEEecCCCccHHHHHHHHHhh-CCCcEEEEEecCCCccccCC
Q 024040 145 YI-LGQ-FENPANPEIHYETTGPEIWNDSG---GKVDAFIAGIGTGGTVTGAGRFLKEK-NPNIKVYGIEPSESAVLNGG 218 (273)
Q Consensus 145 ~~-~~~-~~~~~~~~~g~~t~~~Ei~~q~~---~~~d~iv~p~G~Gg~~~Gi~~~~k~~-~~~~~vigVe~~~~~~~~~~ 218 (273)
++ .++ |+||.++ .||.|++.||++|++ ..+|+||+|+|+|||++|+++++|+. +|+ |||+|||++++.+...
T Consensus 156 ~~~p~~~~~n~~~~-~g~~t~~~Ei~~q~~~~~~~~d~vv~~vG~GGt~~Gi~~~~k~~g~~~-~vigve~~~~~~~~~~ 233 (338)
T 1tzj_A 156 YAIPAGCSDHPLGG-LGFVGFAEEVRAQEAELGFKFDYVVVCSVTGSTQAGMVVGFAADGRAD-RVIGVDASAKPAQTRE 233 (338)
T ss_dssp EECCGGGTSSTTTT-THHHHHHHHHHHHHHHHTSCCSEEEEEESSSHHHHHHHHHHHTTTCGG-GEEEEECSSCHHHHHH
T ss_pred EEeCCCcCCCcccH-HHHHHHHHHHHHHHHhcCCCCCEEEEecCCcHHHHHHHHHHHhhCCCC-eEEEEEccCchHHHHH
Confidence 54 355 8999999 599999999999995 47999999999999999999999998 788 9999999999765422
Q ss_pred CC---CCccccccCCCC-C---cccccccCCCeEEEeCHHHHHHHHHHHHHHcCceecccC
Q 024040 219 QP---GKHLIQGIGAGV-I---PPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLRQLLY 272 (273)
Q Consensus 219 ~~---~~~~~~glg~~~-~---~~~~~~~~~d~~v~v~d~e~~~a~~~l~~~eGi~~~ps~ 272 (273)
.. .++.+++++.+. . .+.+.++++|+++.|+|+|+++++++|+++|||++||+|
T Consensus 234 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~d~e~~~a~~~l~~~~gi~~ep~y 294 (338)
T 1tzj_A 234 QITRIARQTAEKVGLERDIMRADVVLDERFAGPEYGLPNEGTLEAIRLCARTEGMLTDPVY 294 (338)
T ss_dssp HHHHHHHHHHHHHTCSSCCCGGGCEEECTTSCSBTTBCCHHHHHHHHHHHHHHSCCCCTTT
T ss_pred HHHHHHHHHHHHcCCCCCCCcccEEEecCcccceeecCCHHHHHHHHHHHHhcCCccccch
Confidence 11 123345555432 2 234567789999999999999999999999999999973
No 34
>1x1q_A Tryptophan synthase beta chain; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.50A {Thermus thermophilus}
Probab=100.00 E-value=2.6e-49 Score=364.71 Aligned_cols=256 Identities=21% Similarity=0.252 Sum_probs=199.5
Q ss_pred hccC-CCcceecccccCCC-CceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHH
Q 024040 13 ELIG-HTPMVYLNNVVDGC-VARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAAS 90 (273)
Q Consensus 13 ~~~~-~TPl~~~~~l~~~~-g~~l~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~ 90 (273)
.+++ +|||+++++|++.+ +.+||+|+|++|||||||+|++.+++..+.++|+ ...|+++|+||||+|+|++|++
T Consensus 72 ~~ig~~TPL~~~~~Ls~~~gg~~i~lK~E~l~ptGSfK~R~a~~~i~~a~~~g~----~~vI~~~ssGNhg~avA~aaa~ 147 (418)
T 1x1q_A 72 QFAGRPTPLYHAKRLSEYWGGAQVFLKREDLLHTGAHKINNTLGQALLARRMGK----RRVIAETGAGQHGVSVATVAAL 147 (418)
T ss_dssp HTTCCSCCEEECHHHHHHHTSSEEEEEEGGGSGGGBTTHHHHHHHHHHHHHHTC----CEEEEECSSSHHHHHHHHHHHH
T ss_pred cccCCCCCcEEhHHhHhhcCCceEEEEEccCCcCccHHHHHHHHHHHHHHHcCC----CEEEEecCchHHHHHHHHHHHH
Confidence 5664 69999999999887 5899999999999999999999999998888775 3434568999999999999999
Q ss_pred cCCeEEEEecCCC---CHHHHHHHHHcCCEEEEeCC-CCChhHHHHHHHH-HHHhCCCeEee-CCCCCCc----chHhhh
Q 024040 91 RGYKLIIIMPSTY---SIERRIILRALGAEVYLADP-AVGFEGFVKKGEE-ILNRTPNGYIL-GQFENPA----NPEIHY 160 (273)
Q Consensus 91 ~g~~~~i~~p~~~---~~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~-~~~~~~~~~~~-~~~~~~~----~~~~g~ 160 (273)
+|++|+||||+.. +..|+.+|+.+||+|+.++. ..+++++.+.+.+ ++++.++.+|+ +++.|+. ++..||
T Consensus 148 ~Gi~~~I~mp~~~~~~~~~kv~~~~~~GA~Vv~v~~~~~~~~~a~~~a~~~~~~~~~~~~~i~~~~~n~~p~~~~v~~gq 227 (418)
T 1x1q_A 148 FGLECVVYMGEEDVRRQALNVFRMKLLGAEVRPVAAGSRTLKDATNEAIRDWITNVRTTFYILGSVVGPHPYPMMVRDFQ 227 (418)
T ss_dssp HTCEEEEEEEHHHHHTCHHHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHTTTTEEECCCCSSSSTTHHHHHHHHH
T ss_pred cCCCEEEEECCCcchhhhHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHhCCCcEEEeCCccCCCCcHHHHHHHH
Confidence 9999999999752 23678899999999999984 3468888887754 45554455554 5554433 233599
Q ss_pred hchHHHHHHhh----CCCcCEEEEecCCCccHHHHHHHHHhh-CCCcEEEEEecCCCcc--------ccCCCC-------
Q 024040 161 ETTGPEIWNDS----GGKVDAFIAGIGTGGTVTGAGRFLKEK-NPNIKVYGIEPSESAV--------LNGGQP------- 220 (273)
Q Consensus 161 ~t~~~Ei~~q~----~~~~d~iv~p~G~Gg~~~Gi~~~~k~~-~~~~~vigVe~~~~~~--------~~~~~~------- 220 (273)
+|++.||++|+ +..||+||+|+|+||+++|++.+||++ .|++|||||||++++. +..+.+
T Consensus 228 ~t~~~Ei~~Ql~~~~~~~~D~vvvpvGgGG~~~Gi~~~~k~l~~p~~~vigVe~~g~~~~~~~~~~~l~~G~~~~~~g~~ 307 (418)
T 1x1q_A 228 SVIGEEVKRQSLELFGRLPDALIAAVGGGSNAIGLFAPFAYLPEGRPKLIGVEAAGEGLSTGRHAASIGAGKRGVLHGSY 307 (418)
T ss_dssp THHHHHHHHHHHHHHSSCCSEEEEECSSSSHHHHHHHHHHTSCTTCCEEEEEEECCTTSSSCHHHHHHHHTCEEEETTEE
T ss_pred HHHHHHHHHHHHhhcCCCCCEEEEecCCcHhHHHHHHHHHHhCCCCCeEEEEecCCcccccHHHHHHHHcCCeeeecccc
Confidence 99999999998 345999999999999999999999987 7899999999999731 222221
Q ss_pred -------------CCccccccCCCCCc---ccccccCCCeEEEeCHHHHHHHHHHHHHHcCceecccC
Q 024040 221 -------------GKHLIQGIGAGVIP---PVLDVAMLDEVITVSSEEAIETSKLLALKEGLLRQLLY 272 (273)
Q Consensus 221 -------------~~~~~~glg~~~~~---~~~~~~~~d~~v~v~d~e~~~a~~~l~~~eGi~~~ps~ 272 (273)
..++++++..+... +.+....+|+++.|+|+|+.+++++|+++|||+++|++
T Consensus 308 ~~~~~~~~g~~~~~~tia~gl~~~~~g~~~~~l~~~~~~~~~~Vsd~e~~~a~~~l~~~egi~~~~~s 375 (418)
T 1x1q_A 308 MYLLYDHDGQITPAHSVSAGLDYPGVGPEHSYYADAGVAEYASVTDEEALEGFKLLARLEGIIPALES 375 (418)
T ss_dssp EEBCCC----------------CSBCCHHHHHHHHHTSEEEEEECHHHHHHHHHHHHHHHSCCBCHHH
T ss_pred ccccccccccccCCceeeeccCCCCCCHHHHHHHhccCeEEEEECHHHHHHHHHHHHHhcCCcccchH
Confidence 12445555543221 22345667999999999999999999999999998875
No 35
>1qop_B Tryptophan synthase beta chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.79.1.1 PDB: 1k7e_B* 1k7f_B* 1kfb_B* 1k3u_B* 1tjp_B* 1wbj_B* 2cli_B* 2clk_B* 2cll_B* 2j9x_B* 3cep_B* 1kfc_B* 1k8x_B* 1kfj_B* 1kfk_B* 2rh9_B* 2rhg_B* 2j9y_B* 1cw2_B* 1a5s_B* ...
Probab=100.00 E-value=6.4e-49 Score=360.14 Aligned_cols=257 Identities=20% Similarity=0.238 Sum_probs=205.9
Q ss_pred HHhhccC-CCcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEe-eCCChHHHHHHHH
Q 024040 10 DVTELIG-HTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIE-LTSGNTGIGLAFI 87 (273)
Q Consensus 10 ~i~~~~~-~TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~-~ssGN~g~a~A~~ 87 (273)
.+...++ +|||+++++|++.+|.+||+|+|++|||||||+|++.+++..+.++|. .. +|+ +|+||||+|+|++
T Consensus 47 ~~~~~ig~~TPL~~~~~l~~~~g~~i~lK~E~l~ptGSfK~R~a~~~~~~a~~~g~----~~-vi~e~ssGNhg~a~A~a 121 (396)
T 1qop_B 47 LLKNYAGRPTALTKCQNITAGTRTTLYLKREDLLHGGAHKTNQVLGQALLAKRMGK----SE-IIAETGAGQHGVASALA 121 (396)
T ss_dssp HHHHTTCCSCCEEECHHHHTTSSEEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTC----CE-EEEEESSSHHHHHHHHH
T ss_pred HHHHhCCCCCCcEEhhhhhhccCCeEEEEeccCCCCCcHHHHHHHHHHHHHHHcCc----CE-EEEecCchHHHHHHHHH
Confidence 3445776 499999999999889999999999999999999999999999988885 34 666 8999999999999
Q ss_pred HHHcCCeEEEEecCC-CCH--HHHHHHHHcCCEEEEeCC-CCChhHHHHHHHHH-HHhCCCeEe-eCCCCCCc----chH
Q 024040 88 AASRGYKLIIIMPST-YSI--ERRIILRALGAEVYLADP-AVGFEGFVKKGEEI-LNRTPNGYI-LGQFENPA----NPE 157 (273)
Q Consensus 88 a~~~g~~~~i~~p~~-~~~--~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~~-~~~~~~~~~-~~~~~~~~----~~~ 157 (273)
|+++|++|+||||+. .+. .|+.+|+.+||+|+.++. ..+++++.+.+++. +++.++.+| ++++.|+. ++.
T Consensus 122 a~~~G~~~~i~mp~~~~~~~~~~~~~~~~~GA~V~~v~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~n~~p~~~~v~ 201 (396)
T 1qop_B 122 SALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHSGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVR 201 (396)
T ss_dssp HHHHTCEEEEEEEHHHHHHCHHHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHHHH
T ss_pred HHHCCCcEEEEEcCCchhhhhhHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHhccCCcEEEeCCcCCCCCchHHHH
Confidence 999999999999985 433 457899999999999984 44688888888764 665445555 44544432 233
Q ss_pred hhhhchHHHHHHhh----CCCcCEEEEecCCCccHHHHHHHHHhhCCCcEEEEEecCCCcc--------ccCCCC-----
Q 024040 158 IHYETTGPEIWNDS----GGKVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAV--------LNGGQP----- 220 (273)
Q Consensus 158 ~g~~t~~~Ei~~q~----~~~~d~iv~p~G~Gg~~~Gi~~~~k~~~~~~~vigVe~~~~~~--------~~~~~~----- 220 (273)
.||+|++.||++|+ +..||+||+|+|+||+++|++.+++ ..|.+|||+|||.++.. +..+.+
T Consensus 202 ~g~~t~~~Ei~~Ql~~~~~~~~d~vvvpvG~GG~~~Gi~~~~~-~~~~~~vigVe~~~~~~~~~~~~~~l~~g~~~~~~g 280 (396)
T 1qop_B 202 EFQRMIGEETKAQILDKEGRLPDAVIACVGGGSNAIGMFADFI-NDTSVGLIGVEPGGHGIETGEHGAPLKHGRVGIYFG 280 (396)
T ss_dssp HTTTHHHHHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHGGGT-TCTTSEEEEEEEEETBGGGTBSCCHHHHSEEEEETE
T ss_pred HHHhHHHHHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHHh-cCCCCEEEEEeCCCccccchhhHHHHHcCCeeeecc
Confidence 48999999999999 5579999999999999999999998 48899999999998642 222211
Q ss_pred ---------------CCccccccCCCCC---cccccccCCCeEEEeCHHHHHHHHHHHHHHcCceecccC
Q 024040 221 ---------------GKHLIQGIGAGVI---PPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLRQLLY 272 (273)
Q Consensus 221 ---------------~~~~~~glg~~~~---~~~~~~~~~d~~v~v~d~e~~~a~~~l~~~eGi~~~ps~ 272 (273)
..+.++++..+.. .+.+.+..+|+++.|+|+|+++++++|+++|||+++|++
T Consensus 281 ~~~~~~~~~~g~~~~~~tia~gl~~~~~g~~~~~l~~~~~~~~~~V~d~e~~~a~~~l~~~egi~~~~~s 350 (396)
T 1qop_B 281 MKAPMMQTADGQIEESYSISAGLDFPSVGPQHAYLNSIGRADYVSITDDEALEAFKTLCRHEGIIPALES 350 (396)
T ss_dssp EEEEECBCTTSCBCCCCCSSGGGCCSSCCHHHHHHHHTTSSEEEEEEHHHHHHHHHHHHHHHSCCBCHHH
T ss_pred chhhhcccccCCcCCCceeeccCCCCCCCHHHHHHHhcCCeEEEEECHHHHHHHHHHHHHhcCCccccch
Confidence 2344556654322 233456778999999999999999999999999988764
No 36
>1v8z_A Tryptophan synthase beta chain 1; beta+alpha, riken structural genomics/proteomics initiative, structural genomics, lyase; HET: PLP; 2.21A {Pyrococcus furiosus} SCOP: c.79.1.1 PDB: 1wdw_B*
Probab=100.00 E-value=1.8e-48 Score=356.34 Aligned_cols=258 Identities=22% Similarity=0.247 Sum_probs=205.1
Q ss_pred HHHhhccCC-CcceecccccCCCC-ceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEE-eeCCChHHHHHH
Q 024040 9 KDVTELIGH-TPMVYLNNVVDGCV-ARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLI-ELTSGNTGIGLA 85 (273)
Q Consensus 9 ~~i~~~~~~-TPl~~~~~l~~~~g-~~l~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv-~~ssGN~g~a~A 85 (273)
+.+...+++ |||+++++|++.+| .+||+|+|++|||||||+|++.+++..+.++|. .. +| ++|+||||+|+|
T Consensus 41 ~~~~~~ig~~TPL~~~~~l~~~~g~~~i~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~----~~-vv~~~ssGN~g~a~A 115 (388)
T 1v8z_A 41 YYLKTWAGRPTPLYYAKRLTEKIGGAKIYLKREDLVHGGAHKTNNAIGQALLAKFMGK----TR-LIAETGAGQHGVATA 115 (388)
T ss_dssp HHHHHTTCCSCCEEECHHHHHHHTSSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTC----CE-EEEEESSSHHHHHHH
T ss_pred HHHHHhcCCCCCceehHhhHhhcCCceEEEEeccCCCCCCHHHHHHHHHHHHHHHcCC----CE-EEEecCchHHHHHHH
Confidence 345567865 99999999988776 899999999999999999999999998888875 34 55 589999999999
Q ss_pred HHHHHcCCeEEEEecCC-CC--HHHHHHHHHcCCEEEEeCC-CCChhHHHHHHHH-HHHhCCCeEe-eCCCCCCcc----
Q 024040 86 FIAASRGYKLIIIMPST-YS--IERRIILRALGAEVYLADP-AVGFEGFVKKGEE-ILNRTPNGYI-LGQFENPAN---- 155 (273)
Q Consensus 86 ~~a~~~g~~~~i~~p~~-~~--~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~-~~~~~~~~~~-~~~~~~~~~---- 155 (273)
++|+++|++|+||||+. .+ +.|+++++.+||+|+.++. ..+++++.+.+.+ ++++.++.+| ++++.|+.+
T Consensus 116 ~aa~~~G~~~~iv~p~~~~~~~~~~~~~~~~~GA~V~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~n~~p~~~~ 195 (388)
T 1v8z_A 116 MAGALLGMKVDIYMGAEDVERQKMNVFRMKLLGANVIPVNSGSRTLKDAINEALRDWVATFEYTHYLIGSVVGPHPYPTI 195 (388)
T ss_dssp HHHHHTTCEEEEEEEHHHHTTCHHHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHH
T ss_pred HHHHHcCCcEEEEEcCCchhhhhhHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHhCCCceEecCCccCCCCchhH
Confidence 99999999999999974 23 4678999999999999985 3468888888754 5666545554 566655442
Q ss_pred hHhhhhchHHHHHHhh----CCCcCEEEEecCCCccHHHHHHHHHhhCCCcEEEEEecCCCcc--------ccCCCC---
Q 024040 156 PEIHYETTGPEIWNDS----GGKVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAV--------LNGGQP--- 220 (273)
Q Consensus 156 ~~~g~~t~~~Ei~~q~----~~~~d~iv~p~G~Gg~~~Gi~~~~k~~~~~~~vigVe~~~~~~--------~~~~~~--- 220 (273)
+..||.|++.||++|+ +..+|+||+|+|+||+++|++.+++. .|.+|||+|||++++. +..+.+
T Consensus 196 ~~~~~~t~~~Ei~~q~~~~~~~~~d~vvvpvG~GG~~aGi~~~~~~-~~~~~vigve~~~~~~~~~~~~~~l~~g~~~~~ 274 (388)
T 1v8z_A 196 VRDFQSVIGREAKAQILEAEGQLPDVIVACVGGGSNAMGIFYPFVN-DKKVKLVGVEAGGKGLESGKHSASLNAGQVGVF 274 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHGGGTT-CTTSEEEEEEEEETBGGGTBSCCHHHHCEEEEE
T ss_pred HHHHhHHHHHHHHHHHHHhcCCCCCEEEEecCccHhHHHHHHHHhh-CCCceEEEEccCccccchhhhhHHHhcCCceec
Confidence 3348999999999998 44699999999999999999999884 8899999999998643 111211
Q ss_pred -----------------CCccccccCCCCC---cccccccCCCeEEEeCHHHHHHHHHHHHHHcCceecccC
Q 024040 221 -----------------GKHLIQGIGAGVI---PPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLRQLLY 272 (273)
Q Consensus 221 -----------------~~~~~~glg~~~~---~~~~~~~~~d~~v~v~d~e~~~a~~~l~~~eGi~~~ps~ 272 (273)
..+.++++..... .+.+....+|+++.|+|+|+++++++|+++|||+++|++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~tia~gl~~~~~g~~~~~~~~~~~~~~~~V~d~e~~~a~~~l~~~egi~~~~~s 346 (388)
T 1v8z_A 275 HGMLSYFLQDEEGQIKPTHSIAPGLDYPGVGPEHAYLKKIQRAEYVTVTDEEALKAFHELSRTEGIIPALES 346 (388)
T ss_dssp TTEEEEECBCTTSCBCCCCCSSTTSCCSBCCHHHHHHHHTTSEEEEEEEHHHHHHHHHHHHHHHSCCBCHHH
T ss_pred cccccccccccccccCCCceeeeccccCCCChhHHHHHhcCCcEEEEECHHHHHHHHHHHHHhcCCeecccH
Confidence 2234455544211 123445677999999999999999999999999998775
No 37
>1e5x_A Threonine synthase; threonine biosynthesis, PLP enzyme, S-adenosyl-methionine, allostery; 2.25A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 2c2b_A* 2c2g_A*
Probab=100.00 E-value=2e-48 Score=364.32 Aligned_cols=252 Identities=19% Similarity=0.166 Sum_probs=205.1
Q ss_pred HhhccCCCcceecccccCC-CC-ceEEEEeCCCCCCCchhhHHHHHHHHHHHH---cCCCCCCCeEEEeeCCChHHHHHH
Q 024040 11 VTELIGHTPMVYLNNVVDG-CV-ARIAAKLEMMQPCSSVKDRIAYSMIKDAED---KGLITPGKTVLIELTSGNTGIGLA 85 (273)
Q Consensus 11 i~~~~~~TPl~~~~~l~~~-~g-~~l~~K~E~~~ptGS~K~R~a~~~~~~a~~---~g~~~~g~~~vv~~ssGN~g~a~A 85 (273)
+..++++|||+++++|++. +| .+||+|+|++|||||||||++.+++..+.+ ++. +..+||++|+||||+|+|
T Consensus 124 v~l~~g~TPLv~l~~L~~~~lg~~~l~~K~E~~nPTGSFKDRga~~~~~~l~~~~~~~~---g~~~Vv~aSsGNtG~AlA 200 (486)
T 1e5x_A 124 VSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKR---PVVGVGCASTGDTSAALS 200 (486)
T ss_dssp CCCCCCCCCEEECHHHHHHHHCCSSEEEEETTSSTTSBTTHHHHHHHHHHHHHHHHTTC---CCCEEEECCCSHHHHHHH
T ss_pred ccccCCCCCcEECcccchhhcCCCcEEEeeccCCCccCHHHHHHHHHHHHHHHHHHcCC---CCeEEEEcCCCHHHHHHH
Confidence 4556889999999999887 77 489999999999999999999998876654 331 134599999999999999
Q ss_pred HHHHHcCCeEEEEecCC-CCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCCCCCCcchHhhhhchH
Q 024040 86 FIAASRGYKLIIIMPST-YSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTG 164 (273)
Q Consensus 86 ~~a~~~g~~~~i~~p~~-~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~ 164 (273)
++|+++|++|+||+|++ ++..|+.+|+.+||+|+.+++ +|+++.+.+++++++. ++++++++ ||.++ .||.|++
T Consensus 201 ~~a~~~Gi~~~I~~P~~~~s~~k~~~~~~~GA~vi~v~g--~~dd~~~~a~~l~~~~-~~~~vns~-N~~~i-~gq~t~~ 275 (486)
T 1e5x_A 201 AYCASAGIPSIVFLPANKISMAQLVQPIANGAFVLSIDT--DFDGCMKLIREITAEL-PIYLANSL-NSLRL-EGQKTAA 275 (486)
T ss_dssp HHHHHHTCCEEEEEEGGGCCHHHHHHHHHTTCEEEEEES--CHHHHHHHHHHHHHHS-CEEEGGGS-HHHHH-HHHTHHH
T ss_pred HHHHHcCCeEEEEECCCCCCHHHHHHHHhCCCEEEEECC--CHHHHHHHHHHHHhcC-CEEEeCCC-CHHHH-HHHHHHH
Confidence 99999999999999996 999999999999999999996 4899999999998886 68888887 88888 5999999
Q ss_pred HHHHHhhCC-CcCEEEEecCCCccHHHHHHHHHhhC------CCcEEEEEecCCCcccc----CCC----C---CCcccc
Q 024040 165 PEIWNDSGG-KVDAFIAGIGTGGTVTGAGRFLKEKN------PNIKVYGIEPSESAVLN----GGQ----P---GKHLIQ 226 (273)
Q Consensus 165 ~Ei~~q~~~-~~d~iv~p~G~Gg~~~Gi~~~~k~~~------~~~~vigVe~~~~~~~~----~~~----~---~~~~~~ 226 (273)
+||++|+++ .||+||+|+|+||+++|++.+|+++. +.+|||+|||++++++. .++ + .++.++
T Consensus 276 ~Ei~~ql~~~~~D~vvvpvG~GG~i~Gi~~a~k~~~~~Gli~p~~rvi~Ve~~~~~~l~~~~~~G~~~~~~~~~~~t~a~ 355 (486)
T 1e5x_A 276 IEILQQFDWQVPDWVIVPGGNLGNIYAFYKGFKXCQELGLVDRIPRMVCAQAANANPLYLHYKSGWKDFKPMTASTTFAS 355 (486)
T ss_dssp HHHHHHTTSCCCSEEEEECSSTHHHHHHHHHHHHHHHTTSSSCCCEEEEEEETTSSTHHHHHHTTTTTCCC---------
T ss_pred HHHHHHcCCCCCCEEEEeCCcHHHHHHHHHHHHHhhhhccCCCCCEEEEEecCCCchHHHHHHcCCCccccCCCCCeeCc
Confidence 999999964 59999999999999999999998764 78999999999987653 342 1 346677
Q ss_pred ccCCCCCccccc--ccCCCe----EEEeCHHHHHHHHHHHHHHcCceecccC
Q 024040 227 GIGAGVIPPVLD--VAMLDE----VITVSSEEAIETSKLLALKEGLLRQLLY 272 (273)
Q Consensus 227 glg~~~~~~~~~--~~~~d~----~v~v~d~e~~~a~~~l~~~eGi~~~ps~ 272 (273)
+|+.+. |.++. ...+|+ ++.|+|+|++++++ +++++|+++||++
T Consensus 356 gi~i~~-p~~~~~~~~~~~~~~g~~~~Vsd~e~~~ai~-l~~~eGi~~ePss 405 (486)
T 1e5x_A 356 AIQIGD-PVSIDRAVYALKKCNGIVEEATEEELMDAMA-QADSTGMFICPHT 405 (486)
T ss_dssp --------CCCHHHHHHHHHTTCEEEEECHHHHHHHHH-HHHHTTCCCCHHH
T ss_pred cccCCC-CccHHHHHHHHhccCCeEEEECHHHHHHHHH-HHHHCCeEEChhH
Confidence 877663 33332 223444 99999999999999 7788999999986
No 38
>2o2e_A Tryptophan synthase beta chain; amino-acid biosynthesis, tryptophan biosynthesis, structural genomics; 2.20A {Mycobacterium tuberculosis} PDB: 2o2j_A
Probab=100.00 E-value=2e-47 Score=352.15 Aligned_cols=256 Identities=21% Similarity=0.250 Sum_probs=190.4
Q ss_pred hhccC-CCcceecccccCCC-CceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHH
Q 024040 12 TELIG-HTPMVYLNNVVDGC-VARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAA 89 (273)
Q Consensus 12 ~~~~~-~TPl~~~~~l~~~~-g~~l~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~ 89 (273)
..+++ +|||+++++|++.+ +.+||+|+|++|||||||+|++.+++..+.+.|+ ...|+++|+||||+|+|++|+
T Consensus 75 ~~~~g~~TPL~~~~~Ls~~~gg~~i~lK~E~lnptGSfK~R~a~~~~~~a~~~g~----~~vI~~~ssGNhG~A~A~aaa 150 (422)
T 2o2e_A 75 ANYAGRPSPLYEATRLSQHAGSARIFLKREDLNHTGSHKINNVLGQALLARRMGK----TRVIAETGAGQHGVATATACA 150 (422)
T ss_dssp TTTSSCSCCEEECGGGGGGTTTCEEEEECGGGCCSSTTHHHHHHHHHHHHHHTTC----CEEEEEESSSHHHHHHHHHHH
T ss_pred HHhCCCCCCeEEChhhHhhcCCCeEEEEEcCCCCCCcHHHHHHHHHHHHHHHcCC----CeEEEecCccHHHHHHHHHHH
Confidence 44664 59999999999988 4899999999999999999999999999888875 344556899999999999999
Q ss_pred HcCCeEEEEecCCCC---HHHHHHHHHcCCEEEEeCC-CCChhHHHHHHHH-HHHhCCCeEee-CCCCC--Cc--chHhh
Q 024040 90 SRGYKLIIIMPSTYS---IERRIILRALGAEVYLADP-AVGFEGFVKKGEE-ILNRTPNGYIL-GQFEN--PA--NPEIH 159 (273)
Q Consensus 90 ~~g~~~~i~~p~~~~---~~~~~~~~~~Ga~v~~~~~-~~~~~~~~~~a~~-~~~~~~~~~~~-~~~~~--~~--~~~~g 159 (273)
++|++|+||||+... ..|+.+|+.+||+|+.++. ..+++++.+.+.+ ++++.++.+|+ +++.+ |+ ++..|
T Consensus 151 ~~G~~~~I~mp~~~~~~q~~kv~~~~~~GA~Vv~v~~~~~~~~da~~~a~~~~~~~~~~~~yi~~s~~g~~p~~~~v~~~ 230 (422)
T 2o2e_A 151 LLGLDCVIYMGGIDTARQALNVARMRLLGAEVVAVQTGSKTLKDAINEAFRDWVANADNTYYCFGTAAGPHPFPTMVRDF 230 (422)
T ss_dssp HHTCEEEEEEEHHHHHHSHHHHHHHHHTTCEEEEECSTTSCHHHHHHHHHHHHHHHTTTEEECCCCSSSCCCCHHHHHHH
T ss_pred HcCCcEEEEeCCCcchhhHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHhcCCCcEEEeCCccCCCCcHHHHHHH
Confidence 999999999998532 4678899999999999975 3478888887755 56664465554 44433 22 23358
Q ss_pred hhchHHHHHHhh----CCCcCEEEEecCCCccHHHHHHHHHhhCCCcEEEEEecCCCc--------cccCCCC-------
Q 024040 160 YETTGPEIWNDS----GGKVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESA--------VLNGGQP------- 220 (273)
Q Consensus 160 ~~t~~~Ei~~q~----~~~~d~iv~p~G~Gg~~~Gi~~~~k~~~~~~~vigVe~~~~~--------~~~~~~~------- 220 (273)
|.+++.||++|+ +..||+||+|+|+||+++|++.+++. .|.+|||||||.++. .+..+.+
T Consensus 231 q~t~g~Ei~~Ql~~~~~~~pD~vvvpvG~GG~~~Gi~~~~~~-~p~v~vigVe~~g~~~~~~~~~~~l~~g~~~~~~g~~ 309 (422)
T 2o2e_A 231 QRIIGMEARVQIQGQAGRLPDAVVACVGGGSNAIGIFHAFLD-DPGVRLVGFEAAGDGVETGRHAATFTAGSPGAFHGSF 309 (422)
T ss_dssp TTHHHHHHHHHHHHHSSSCCSEEEEEGGGHHHHHTTSGGGTT-CTTCEEEEEEECC------------------------
T ss_pred HHHHHHHHHHHHHHhhCCCCCEEEEccCCchhHHHHHHHHhc-CCCCeEEEEecCCCcccchhHHHHHHcCCceeccccc
Confidence 999999999997 34599999999999999999888864 788999999999872 2322322
Q ss_pred -------------CCccccccCCCCC---cccccccCCCeEEEeCHHHHHHHHHHHHHHcCceecccC
Q 024040 221 -------------GKHLIQGIGAGVI---PPVLDVAMLDEVITVSSEEAIETSKLLALKEGLLRQLLY 272 (273)
Q Consensus 221 -------------~~~~~~glg~~~~---~~~~~~~~~d~~v~v~d~e~~~a~~~l~~~eGi~~~ps~ 272 (273)
..+++++|..+.+ ...+....+|+++.|+|+|+++++++|+++|||++++++
T Consensus 310 ~~~~~~~~g~~~~~~tia~gl~~~~~g~~~~~l~~~~~~~~~~Vsd~e~~~a~~~l~~~eGi~~~~es 377 (422)
T 2o2e_A 310 SYLLQDEDGQTIESHSISAGLDYPGVGPEHAWLKEAGRVDYRPITDSEAMDAFGLLCRMEGIIPAIES 377 (422)
T ss_dssp -------------------------------------CCEEEEECHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred hhhcccccccccCCceeecccCCCCCCHHHHHHHHhCCeeEEEECHHHHHHHHHHHHHHcCCccCchH
Confidence 1233445543211 123455677999999999999999999999999987764
No 39
>1vb3_A Threonine synthase; PLP-dependent enzyme, lyase; HET: KPA; 2.20A {Escherichia coli} SCOP: c.79.1.1
Probab=100.00 E-value=8.3e-42 Score=315.34 Aligned_cols=238 Identities=15% Similarity=0.089 Sum_probs=192.2
Q ss_pred cCCCcceecccccCCCCceEEEEeCCC-CCCCchhhHHHHHHH---HHHHHcCCCCCCCeEEEeeCCChHHHHHH-HHHH
Q 024040 15 IGHTPMVYLNNVVDGCVARIAAKLEMM-QPCSSVKDRIAYSMI---KDAEDKGLITPGKTVLIELTSGNTGIGLA-FIAA 89 (273)
Q Consensus 15 ~~~TPl~~~~~l~~~~g~~l~~K~E~~-~ptGS~K~R~a~~~~---~~a~~~g~~~~g~~~vv~~ssGN~g~a~A-~~a~ 89 (273)
-++|||+++++ +||+ +|++ |||||||||++.+++ .++ .++. ..+|+++|+||||+|+| ++|+
T Consensus 81 ~~~TPL~~l~~-------~i~~-~E~~~~pTgSfKdr~a~~l~~~l~~a-~~~~----~~~Iv~atsGNtG~A~A~~~a~ 147 (428)
T 1vb3_A 81 AFPAPVANVES-------DVGC-LELFHGPTLAFKDFGGRFMAQMLTHI-AGDK----PVTILTATSGDTGAAVAHAFYG 147 (428)
T ss_dssp CSCCCEEEEET-------TEEE-EECCCSTTSBTHHHHHHHHHHHHHHH-TTTC----CEEEEEECSSSHHHHHHHHTTT
T ss_pred CCCCCeEEecC-------CeEE-eeccCCCcccHHHHHHHHHHHHHHHH-HhcC----CCEEEecCCchHHHHHHHHHhh
Confidence 37899999874 6999 6777 699999999999884 445 2332 45699999999999999 5999
Q ss_pred HcCCeEEEEecC-CCCHHHHHHHHHcCCEE--EEeCCCCChhHHHHHHHHHHHh-----CCCeEeeCCCCCCcchHhhhh
Q 024040 90 SRGYKLIIIMPS-TYSIERRIILRALGAEV--YLADPAVGFEGFVKKGEEILNR-----TPNGYILGQFENPANPEIHYE 161 (273)
Q Consensus 90 ~~g~~~~i~~p~-~~~~~~~~~~~~~Ga~v--~~~~~~~~~~~~~~~a~~~~~~-----~~~~~~~~~~~~~~~~~~g~~ 161 (273)
++|++|+||||+ ++++.|+++|+.+||+| +.++ .+++++.+.++++.++ ..++++++++ ||.++ .||.
T Consensus 148 ~~G~~~~I~~P~~~~s~~k~~~m~~~GA~V~~v~v~--g~~d~~~~~~~~~~~d~~~~~~~~~~~~n~~-n~~~~-~gq~ 223 (428)
T 1vb3_A 148 LPNVKVVILYPRGKISPLQEKLFCTLGGNIETVAID--GDFDACQALVKQAFDDEELKVALGLNSANSI-NISRL-LAQI 223 (428)
T ss_dssp CTTEEEEEEEETTCSCHHHHHHHHSCCTTEEEEEEE--SCHHHHHHHHHHGGGCHHHHHHHTEECCSTT-SHHHH-HHTT
T ss_pred hcCCeEEEEECCCCCCHHHHHHHHhcCCeEEEEEeC--CCHHHHHHHHHHHHhchhhhhhcCeeeCCCC-CHHHH-HHHH
Confidence 999999999999 59999999999999999 5665 4689998888887652 1256677765 67777 5999
Q ss_pred chHHHHHHhhCC---CcCEEEEecCCCccHHHHHHHHHhhCCCcEEEEEecCCCccc----cCCCC-----CCccccccC
Q 024040 162 TTGPEIWNDSGG---KVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVL----NGGQP-----GKHLIQGIG 229 (273)
Q Consensus 162 t~~~Ei~~q~~~---~~d~iv~p~G~Gg~~~Gi~~~~k~~~~~~~vigVe~~~~~~~----~~~~~-----~~~~~~glg 229 (273)
++++||++|+.+ .+|+||+|+|+||+++|++.+++...|.+|||+|++.+. .+ ..+.. ..+.+++++
T Consensus 224 t~~~Ei~~ql~~~g~~~d~vvvpvG~GG~i~G~~~a~~~g~p~~kii~a~~~~~-~l~~~~~~G~~~~~~~~~tis~g~~ 302 (428)
T 1vb3_A 224 CYYFEAVAQLPQETRNQLVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAATNVND-TVPRFLHDGQWSPKATQATLSNAMD 302 (428)
T ss_dssp HHHHHHHTTSCTTTTTSEEEEEECSSCHHHHHHHHHHHTTCCCSEEEEEECSCC-HHHHHHHHSCCCCCCCCCCSSGGGC
T ss_pred HHHHHHHHHcccccCCCCEEEEeCCchHHHHHHHHHHHcCCCCCeEEeecCCCh-HHHHHHHcCCcccCCCCCcccchhc
Confidence 999999999964 599999999999999999999988778889999998763 22 23332 345566776
Q ss_pred CCCCcccc------cccC-----CCeEEEeCHHHHHHHHHHHHHHcCceecccC
Q 024040 230 AGVIPPVL------DVAM-----LDEVITVSSEEAIETSKLLALKEGLLRQLLY 272 (273)
Q Consensus 230 ~~~~~~~~------~~~~-----~d~~v~v~d~e~~~a~~~l~~~eGi~~~ps~ 272 (273)
.+. |.++ ..+. .++++.|+|+|+.+++++| +++|+++||+|
T Consensus 303 i~~-p~~~~~~~~l~~~~~~~~~~~~~~~Vsd~e~~~a~~~l-~~eGi~~~p~s 354 (428)
T 1vb3_A 303 VSQ-PNNWPRVEELFRRKIWQLKELGYAAVDDETTQQTMREL-KELGYTSEPHA 354 (428)
T ss_dssp CSS-CTTHHHHHHHHHHTTCCGGGSEEEECCHHHHHHHHHHH-HHTTCCCCHHH
T ss_pred CCC-CccHHHHHHHHhcchhhhhCcEEEEECHHHHHHHHHHH-HHCCeEECchH
Confidence 552 3332 2223 6899999999999999999 99999999986
No 40
>1kl7_A Threonine synthase; threonine synthesis, pyridoxal 5-phosphate, beta-family, MON lyase; HET: PLP; 2.70A {Saccharomyces cerevisiae} SCOP: c.79.1.1
Probab=100.00 E-value=1.4e-38 Score=298.05 Aligned_cols=246 Identities=16% Similarity=0.067 Sum_probs=185.2
Q ss_pred ccCCCccee--cccccCCCCceEEEEeCCCCCCCchhhHHHHHHH---HHHH-HcCC-----CCCCCeEEEeeCCChHHH
Q 024040 14 LIGHTPMVY--LNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMI---KDAE-DKGL-----ITPGKTVLIELTSGNTGI 82 (273)
Q Consensus 14 ~~~~TPl~~--~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~~---~~a~-~~g~-----~~~g~~~vv~~ssGN~g~ 82 (273)
..+.|||++ ++++ .+||+|.|++|||||||||++.+++ .+++ ++|. +.++ .+||++||||||.
T Consensus 93 ~~g~TPLv~~~l~~l-----~~l~~K~e~~nPTgSFKDrga~~~~~~~~~a~~~~g~~~~~~~~~~-~~Iv~ATSGNtG~ 166 (514)
T 1kl7_A 93 SDEVTPLVQNVTGDK-----ENLHILELFHGPTYAFKDVALQFVGNLFEYFLQRTNANLPEGEKKQ-ITVVGATSGDTGS 166 (514)
T ss_dssp STTSSCEECCTTCSS-----SCEEEEECCCSTTSBTHHHHHHHHHHHHHHHHHHHHTTSCSSSCCC-EEEEEECSSSHHH
T ss_pred CCCCCceeehhcccc-----cchhhhhhccCCCCcHHHHHHHHHHHHHHHHHHhcCCccccccCCC-CEEEECCCCcHHH
Confidence 477899999 7655 4799999999999999999999984 4443 3441 3343 4599999999999
Q ss_pred HHHHHH--HHcCCeEEEEecCC-CCHHHHHHH---HHcCCEEEEeCCCCChhHHHHHHHHHHHhCC-----CeEeeCCCC
Q 024040 83 GLAFIA--ASRGYKLIIIMPST-YSIERRIIL---RALGAEVYLADPAVGFEGFVKKGEEILNRTP-----NGYILGQFE 151 (273)
Q Consensus 83 a~A~~a--~~~g~~~~i~~p~~-~~~~~~~~~---~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~-----~~~~~~~~~ 151 (273)
| |++| ++.|++++||+|++ +++.+..+| ..+|++++.+++ +|+++.+.+++++++.+ +.++.++.
T Consensus 167 A-A~~a~a~~~Gi~~~I~~P~~~~S~~q~~qm~~~~g~~~~vv~v~g--~fdda~~~vk~l~~~~~~~~~~~~~~~Ns~- 242 (514)
T 1kl7_A 167 A-AIYGLRGKKDVSVFILYPTGRISPIQEEQMTTVPDENVQTLSVTG--TFDNCQDIVKAIFGDKEFNSKHNVGAVNSI- 242 (514)
T ss_dssp H-HHHHHTTCTTEEEEEEEETTSSCHHHHHHHHHCCCTTEEEEEESS--CHHHHHHHHHHHHHCSSCC--CCBCCCCSC-
T ss_pred H-HHHHHHhhcCCeEEEEEcCCCCCHHHHHHHhhhcCCCEEEEEcCC--CHHHHHHHHHHHHhcccccccceeEeeCCC-
Confidence 9 6666 89999999999997 898777666 345556666664 69999999999987642 22333333
Q ss_pred CCcchHhhhhchHHHHHHhh-C---CCcCEEEEecCCCccHHHHHHHHHhhCCCcEEEEEecCCCcccc----CCCC---
Q 024040 152 NPANPEIHYETTGPEIWNDS-G---GKVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLN----GGQP--- 220 (273)
Q Consensus 152 ~~~~~~~g~~t~~~Ei~~q~-~---~~~d~iv~p~G~Gg~~~Gi~~~~k~~~~~~~vigVe~~~~~~~~----~~~~--- 220 (273)
|+..+ .||.+.++|+++|+ + +.+|+||+|+|+||++.|++.+.+...|.+|+|+|||+++ ++. .|..
T Consensus 243 N~~ri-~gQ~tyy~e~~~ql~~~~~~~~d~~vvP~GngG~i~a~~~ak~~G~p~~rli~v~~~n~-~l~~~~~~G~~~~~ 320 (514)
T 1kl7_A 243 NWARI-LAQMTYYFYSFFQATNGKDSKKVKFVVPSGNFGDILAGYFAKKMGLPIEKLAIATNEND-ILDRFLKSGLYERS 320 (514)
T ss_dssp CHHHH-HHHHHHHHHHHHHHHSSSSCCCEEEEEECSSSHHHHHHHHHHHHTCCCCCEEEEECSCC-HHHHHHHHSEEECC
T ss_pred CHhHH-hhHHHHHHHHHHHHhhhcCCCCcEEEEECCchHHHHHHHHHHHcCCCCCEEEEEeCCcc-hHHHHHhcCCccCC
Confidence 45445 59999999999998 4 3589999999999999999875555467789999999994 432 2321
Q ss_pred ---CCccccccCCCCCcccccc---cCCC------------------------------------------eEEEeCHHH
Q 024040 221 ---GKHLIQGIGAGVIPPVLDV---AMLD------------------------------------------EVITVSSEE 252 (273)
Q Consensus 221 ---~~~~~~glg~~~~~~~~~~---~~~d------------------------------------------~~v~v~d~e 252 (273)
..+..++|... .|.++.+ ...| +++.|+|+|
T Consensus 321 ~~~~~Tis~amdi~-~psn~er~l~~l~~~~~~~~~~~~d~~~v~~~~~~l~~~gg~~~~~~~~~~~~~~f~~~~Vsd~e 399 (514)
T 1kl7_A 321 DKVAATLSPAMDIL-ISSNFERLLWYLAREYLANGDDLKAGEIVNNWFQELKTNGKFQVDKSIIEGASKDFTSERVSNEE 399 (514)
T ss_dssp SSCCCCSCGGGCCS-SCTTHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHHSEEECCHHHHHHHTTTEEEEECCHHH
T ss_pred CCCCCeechhhhcC-CCCcHHHHHHHHhccccccccccccHHHHHHHHHHHHhcCCeeccHHHHHHhhcCceEEEECHHH
Confidence 23444555443 3444321 1122 489999999
Q ss_pred HHHHHHHHHHHc----CceecccC
Q 024040 253 AIETSKLLALKE----GLLRQLLY 272 (273)
Q Consensus 253 ~~~a~~~l~~~e----Gi~~~ps~ 272 (273)
+.++++++++++ |+++||++
T Consensus 400 ~~~ai~~l~~~~~~~~G~~~ep~t 423 (514)
T 1kl7_A 400 TSETIKKIYESSVNPKHYILDPHT 423 (514)
T ss_dssp HHHHHHHHHHHCCSSTTCCCCHHH
T ss_pred HHHHHHHHHHhCCCCCCEEEcccH
Confidence 999999999999 99999986
No 41
>4f4f_A Threonine synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.90A {Brucella melitensis BV}
Probab=100.00 E-value=2.7e-38 Score=292.86 Aligned_cols=237 Identities=15% Similarity=0.121 Sum_probs=186.9
Q ss_pred CcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHH---HHHHH-HcCCCCCCCeEEEeeCCChHHH-HHHHHHHHcC
Q 024040 18 TPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSM---IKDAE-DKGLITPGKTVLIELTSGNTGI-GLAFIAASRG 92 (273)
Q Consensus 18 TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~---~~~a~-~~g~~~~g~~~vv~~ssGN~g~-a~A~~a~~~g 92 (273)
|||+++. .++|+|.|++|||||||||++.++ +.++. ++|. ..+|+++||||||. ++|++|+++|
T Consensus 94 ~pl~~l~-------~~~~~kee~~~PTgSFKDRga~~~~~~l~~a~~~~g~----~~~Vv~ASSGNtG~aa~aa~a~~~G 162 (468)
T 4f4f_A 94 CPLVQTD-------ANEFVLELFHGPTLAFKDVAMQLLARMMDYVLAQRGE----RATIVGATSGDTGGAAIEAFGGRDN 162 (468)
T ss_dssp SCEEEEE-------TTEEEEECCCSTTSBTHHHHHHHHHHHHHHHHHHTTC----CEEEEEECSSHHHHHHHHHHTTCSS
T ss_pred CceEEec-------CCeehHHhccCCcccHHHHHHHHHHHHHHHHHHhcCC----CcEEEEECCchHHHHHHHHHHhccC
Confidence 8999874 269999999999999999999999 77764 5553 34699999999995 4566799999
Q ss_pred CeEEEEecCC-CCHHHHHHHHHcCC-EE--EEeCCCCChhHHHHHHHHHHHhCC-----CeEeeCCCCCCcchHhhhhch
Q 024040 93 YKLIIIMPST-YSIERRIILRALGA-EV--YLADPAVGFEGFVKKGEEILNRTP-----NGYILGQFENPANPEIHYETT 163 (273)
Q Consensus 93 ~~~~i~~p~~-~~~~~~~~~~~~Ga-~v--~~~~~~~~~~~~~~~a~~~~~~~~-----~~~~~~~~~~~~~~~~g~~t~ 163 (273)
++++||||++ +++.|+.+|+.+|+ +| +.+++ +|+++.+.+++++++.+ +++++++ .||..+ +||.|+
T Consensus 163 i~~~I~~P~~~~s~~k~~~~~~~gganV~vv~v~g--~fdda~~~~k~~~~d~~~~~~~~~~~vns-in~~ri-~GQ~T~ 238 (468)
T 4f4f_A 163 TDIFILFPNGRVSPVQQRQMTSSGFSNVHALSIEG--NFDDCQNLVKGMFNDLEFCDALSLSGVNS-INWARI-MPQVVY 238 (468)
T ss_dssp EEEEEEEETTCSCHHHHHHHHCSCCTTEEEEEEES--CHHHHHHHHHHHHHCHHHHHHHTEEECCT-TSHHHH-GGGHHH
T ss_pred CcEEEEeCCCCCCHHHHHHHHhcCCCeEEEeecCC--CHHHHHHHHHHHHhccccccccceEeCCC-CCHHHH-HhHHHH
Confidence 9999999998 99999999999974 55 56664 59999999999876531 4566666 477777 699999
Q ss_pred HHHHHHhhCCCcCE---EEEecCCCccHHHHHHHHHhhCCCcEEEEEecCCCcccc----CCCC-----CCccccccCCC
Q 024040 164 GPEIWNDSGGKVDA---FIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLN----GGQP-----GKHLIQGIGAG 231 (273)
Q Consensus 164 ~~Ei~~q~~~~~d~---iv~p~G~Gg~~~Gi~~~~k~~~~~~~vigVe~~~~~~~~----~~~~-----~~~~~~glg~~ 231 (273)
++||++|++ .+|. |+||+|+||+++|++.+.+...|..|+|+| +.+++++. .|+. ..+.+++|..+
T Consensus 239 ~~Ei~~ql~-~~d~~v~vvVPvG~GG~i~g~~~Ak~mGlPi~kli~a-~n~~~~l~~~l~~G~~~~~~~~~Tia~smdi~ 316 (468)
T 4f4f_A 239 YFTAALSLG-APDRAVSFTVPTGNFGDIFAGYVAKRMGLPIEQLIIA-TNDNDILSRTLESGAYEMRGVAQTTSPSMDIQ 316 (468)
T ss_dssp HHHHHHHTT-TTSSCEEEEEECSSSHHHHHHHHHHHHTCCEEEEEEE-ECSCCHHHHHHHHSEEECCCCCCCSCGGGCCS
T ss_pred HHHHHHhcc-cCCCCeEEEEEeCCcHHHHHHHHHHHhCCCCCEEEEE-eCCchHHHHHHHcCCceecCCcceeCchhhcC
Confidence 999999995 7898 999999999999999884444466799999 88877653 2322 34556666655
Q ss_pred CCcccccc----------------------------------cCCC--eEEEeCHHHHHHHHHHHHHHcCceecccC
Q 024040 232 VIPPVLDV----------------------------------AMLD--EVITVSSEEAIETSKLLALKEGLLRQLLY 272 (273)
Q Consensus 232 ~~~~~~~~----------------------------------~~~d--~~v~v~d~e~~~a~~~l~~~eGi~~~ps~ 272 (273)
. |.++.+ ...+ ..+.|+|+|+.++++++++++|+++||++
T Consensus 317 ~-~sN~erl~~~l~~~d~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~VsD~ei~~ai~~l~~~~g~~vEP~~ 392 (468)
T 4f4f_A 317 I-SSNFERLLFEAHGRDAAAVRGLMQGLKQSGGFTISEKPLSAIRSEFSAGRSTVDETAATIESVLSKDGYLLDPHS 392 (468)
T ss_dssp S-CTTHHHHHHHHTTTCHHHHHHHHHHHHHHSEEECCHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHSCCCCHHH
T ss_pred c-cchHHHHHHHHhccCHHHHHHHHHHHHhcCCeeccHHHHHHHhhcceEEEECHHHHHHHHHHHHHHCCEEECHhH
Confidence 2 222110 0011 27899999999999999999999999986
No 42
>3v7n_A Threonine synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; 1.40A {Burkholderia thailandensis}
Probab=100.00 E-value=1.4e-36 Score=281.58 Aligned_cols=242 Identities=13% Similarity=0.045 Sum_probs=182.2
Q ss_pred CcceecccccCCCCceEEEEeCCCCCCCchhhHHHHHH---HHHHHH-cCCCCCCCeEEEeeCCChHHHHHHHHHH-HcC
Q 024040 18 TPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSM---IKDAED-KGLITPGKTVLIELTSGNTGIGLAFIAA-SRG 92 (273)
Q Consensus 18 TPl~~~~~l~~~~g~~l~~K~E~~~ptGS~K~R~a~~~---~~~a~~-~g~~~~g~~~vv~~ssGN~g~a~A~~a~-~~g 92 (273)
|||+++..- -+.++|+|.|++|||||||||++.++ +.++.+ +|. ..+|+++||||||.|+|++++ +.|
T Consensus 103 ~Pl~~l~~~---~~~~l~vkee~~~PTgSFKDRga~~~~~ll~~a~~~~g~----~~~Vv~ASSGNtG~Aaa~a~~~~~G 175 (487)
T 3v7n_A 103 TPLTTLGTE---NGAPVSLLELSNGPTLAFKDMAMQLLGNLFEYTLAKHGE----TLNILGATSGDTGSAAEYAMRGKEG 175 (487)
T ss_dssp SCEEEEEEE---TTEEEEEEECCCSTTSBTHHHHHHHHHHHHHHHHHTTTC----CEEEEEECSSHHHHHHHHHHTTCTT
T ss_pred ceeEEecCC---CCcceeHHhhccCCcCcHHHHHHHHHHHHHHHHHHhcCC----CcEEEEeCChHHHHHHHHHHHhccC
Confidence 789887420 01239999999999999999999998 788753 453 345999999999999777776 899
Q ss_pred CeEEEEecCC-CCHHHHHHHHHcCC---EEEEeCCCCChhHHHHHHHHHHHhC-----CCeEeeCCCCCCcchHhhhhch
Q 024040 93 YKLIIIMPST-YSIERRIILRALGA---EVYLADPAVGFEGFVKKGEEILNRT-----PNGYILGQFENPANPEIHYETT 163 (273)
Q Consensus 93 ~~~~i~~p~~-~~~~~~~~~~~~Ga---~v~~~~~~~~~~~~~~~a~~~~~~~-----~~~~~~~~~~~~~~~~~g~~t~ 163 (273)
++++||+|++ +++.|+.+|+.+|| +++.+++ +++++.+.++++..+. .+..+++++ ||.++ .|+.+.
T Consensus 176 i~~~I~~P~~~~s~~k~~qm~~~Ga~nv~vv~v~G--~fDda~~~vk~~~~d~~~~~~~~l~~vns~-Np~ri-~gQ~ty 251 (487)
T 3v7n_A 176 VRVFMLSPHKKMSAFQTAQMYSLQDPNIFNLAVNG--VFDDCQDIVKAVSNDHAFKAQQKIGTVNSI-NWARV-VAQVVY 251 (487)
T ss_dssp EEEEEEEETTCSCHHHHHHHHTCCCTTEEEEEEES--CHHHHHHHHHHHHTCHHHHHHTTEECCSTT-CHHHH-HHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHhcCCCcEEEEEECC--CHHHHHHHHHHhhhchHHHhhcCeeeeCCC-CHHHH-HhHHHH
Confidence 9999999997 99999999999998 7777875 5999999998887631 256777775 77777 699988
Q ss_pred HHHHHHhhC---CCcCEEEEecCCCccHHHHHHHHHhhCCCcEEEEEecCCCcccc----CCCC-----CCcc---cccc
Q 024040 164 GPEIWNDSG---GKVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSESAVLN----GGQP-----GKHL---IQGI 228 (273)
Q Consensus 164 ~~Ei~~q~~---~~~d~iv~p~G~Gg~~~Gi~~~~k~~~~~~~vigVe~~~~~~~~----~~~~-----~~~~---~~gl 228 (273)
++|+..|+. +.+|+|+||+|+||+++|++.+.+...|.+|+|+||+++ +++. .|+. ..+. +.+|
T Consensus 252 y~~~~~el~~~~~~~d~vvVP~GngG~i~g~~~A~~mGlp~~rli~a~~~n-~~l~~~~~~G~~~~~~~~~Ti~t~s~sm 330 (487)
T 3v7n_A 252 YFKGYFAATRSNDERVSFTVPSGNFGNVCAGHIARMMGLPIEKLVVATNEN-DVLDEFFRTGAYRVRSAQDTYHTSSPSM 330 (487)
T ss_dssp HHHHHHHTCSSTTCCEEEEEGGGCHHHHHHHHHHHHTTCCEEEEEEECTTC-HHHHHHHHHSEEEC--------------
T ss_pred HHHHHHHHHhcCCCCcEEEEecCchHHHHHHHHHHHcCCCCceEEEEeCCC-cHHHHHHHcCCcccCCCCCccccCCchh
Confidence 888888873 359999999999999999998766555777999999998 4432 2322 2333 4555
Q ss_pred CCCCCcccccc---cC-----------------------------------CCeEEEeCHHHHHHHHHHHHHHcCceecc
Q 024040 229 GAGVIPPVLDV---AM-----------------------------------LDEVITVSSEEAIETSKLLALKEGLLRQL 270 (273)
Q Consensus 229 g~~~~~~~~~~---~~-----------------------------------~d~~v~v~d~e~~~a~~~l~~~eGi~~~p 270 (273)
..+. |.++.+ .. .-..+.|+|+|+.++++++++++|+++||
T Consensus 331 dI~~-psn~er~l~~l~~~d~~~~~~~m~~l~~~g~~~l~~~~~~~~~~~~~~~~~~VsDee~~~air~l~~~~G~l~dP 409 (487)
T 3v7n_A 331 DISK-ASNFERFVFDLLGRDPARVVQLFRDVEQKGGFDLAASGDFARVAEFGFVSGRSTHADRIATIRDVFERYRTMIDT 409 (487)
T ss_dssp -----CHHHHHHHHHHTTTCHHHHHHHHHHHHHHSEEETTTTTCTHHHHHTTEEEECCCHHHHHHHHHHHHHHSCCCCCH
T ss_pred ccCC-CccHHHHHHHHhCCCHHHHHHHHHHHHhcCCeecccchhHHHHHhhcceEEEECHHHHHHHHHHHHHHcCEEECh
Confidence 5442 322110 00 01357899999999999999999999999
Q ss_pred cC
Q 024040 271 LY 272 (273)
Q Consensus 271 s~ 272 (273)
++
T Consensus 410 ht 411 (487)
T 3v7n_A 410 HT 411 (487)
T ss_dssp HH
T ss_pred hH
Confidence 86
No 43
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.65 E-value=0.89 Score=34.02 Aligned_cols=96 Identities=21% Similarity=0.152 Sum_probs=63.6
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCCC
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQF 150 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 150 (273)
+++....|..|..+|...+..|.+++++-. ++.+.+.++..|..++..+... .+.
T Consensus 9 ~viIiG~G~~G~~la~~L~~~g~~v~vid~---~~~~~~~~~~~g~~~i~gd~~~--~~~-------------------- 63 (140)
T 3fwz_A 9 HALLVGYGRVGSLLGEKLLASDIPLVVIET---SRTRVDELRERGVRAVLGNAAN--EEI-------------------- 63 (140)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEES---CHHHHHHHHHTTCEEEESCTTS--HHH--------------------
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEEC---CHHHHHHHHHcCCCEEECCCCC--HHH--------------------
Confidence 388888999999999999999999888754 4577777777888876554321 111
Q ss_pred CCCcchHhhhhchHHHHHHhhC-CCcCEEEEecCCCccHHHHHHHHHhhCCCcEEEEEe
Q 024040 151 ENPANPEIHYETTGPEIWNDSG-GKVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIE 208 (273)
Q Consensus 151 ~~~~~~~~g~~t~~~Ei~~q~~-~~~d~iv~p~G~Gg~~~Gi~~~~k~~~~~~~vigVe 208 (273)
+++.+ ...|.+|++++.-....-+....+..+|..++++-.
T Consensus 64 -----------------l~~a~i~~ad~vi~~~~~~~~n~~~~~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 64 -----------------MQLAHLECAKWLILTIPNGYEAGEIVASARAKNPDIEIIARA 105 (140)
T ss_dssp -----------------HHHTTGGGCSEEEECCSCHHHHHHHHHHHHHHCSSSEEEEEE
T ss_pred -----------------HHhcCcccCCEEEEECCChHHHHHHHHHHHHHCCCCeEEEEE
Confidence 11110 134677777776544444455667777777777644
No 44
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=92.36 E-value=1.4 Score=35.36 Aligned_cols=75 Identities=19% Similarity=0.314 Sum_probs=56.0
Q ss_pred CCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEe-------c--CCCCHHHHHHHH
Q 024040 42 QPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIM-------P--STYSIERRIILR 112 (273)
Q Consensus 42 ~ptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~-------p--~~~~~~~~~~~~ 112 (273)
+|.--+=+..+...+.+|.+.|. ...||..|+|.++..++-.. -|++.++|. | ...+++..+.++
T Consensus 22 ~~G~eNT~~tl~la~era~e~~I----k~iVVAS~sG~TA~k~~e~~--~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L~ 95 (201)
T 1vp8_A 22 KPGRENTEETLRLAVERAKELGI----KHLVVASSYGDTAMKALEMA--EGLEVVVVTYHTGFVREGENTMPPEVEEELR 95 (201)
T ss_dssp SCSGGGHHHHHHHHHHHHHHHTC----CEEEEECSSSHHHHHHHHHC--TTCEEEEEECCTTSSSTTCCSSCHHHHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHHcCC----CEEEEEeCCChHHHHHHHHh--cCCeEEEEeCcCCCCCCCCCcCCHHHHHHHH
Confidence 45556778888888899999885 45344446698887665533 688998887 3 245789999999
Q ss_pred HcCCEEEEeC
Q 024040 113 ALGAEVYLAD 122 (273)
Q Consensus 113 ~~Ga~v~~~~ 122 (273)
..|.+|+...
T Consensus 96 ~~G~~V~t~t 105 (201)
T 1vp8_A 96 KRGAKIVRQS 105 (201)
T ss_dssp HTTCEEEECC
T ss_pred hCCCEEEEEe
Confidence 9999998865
No 45
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=91.81 E-value=1.8 Score=37.40 Aligned_cols=62 Identities=23% Similarity=0.191 Sum_probs=46.8
Q ss_pred HHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 024040 57 KDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLAD 122 (273)
Q Consensus 57 ~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~ 122 (273)
.++++...+++|++.+| ..+|..|.+.+..|+.+|.+++++.. ++.|++.++.+|++.+.-.
T Consensus 156 ~~~l~~~~~~~g~~VlV-~GaG~vG~~a~qla~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~~i~~ 217 (340)
T 3s2e_A 156 YKGLKVTDTRPGQWVVI-SGIGGLGHVAVQYARAMGLRVAAVDI---DDAKLNLARRLGAEVAVNA 217 (340)
T ss_dssp HHHHHTTTCCTTSEEEE-ECCSTTHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHTTCSEEEET
T ss_pred HHHHHHcCCCCCCEEEE-ECCCHHHHHHHHHHHHCCCeEEEEeC---CHHHHHHHHHcCCCEEEeC
Confidence 34556667888888455 55688999999999999997666543 5688999999999866544
No 46
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=91.19 E-value=1.6 Score=37.51 Aligned_cols=59 Identities=27% Similarity=0.278 Sum_probs=45.3
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 024040 61 DKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLAD 122 (273)
Q Consensus 61 ~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~ 122 (273)
+...+++|++.+|...+|..|.+++..|+..|.+++++.. ++.+++.++.+|++.+.-.
T Consensus 134 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~Ga~~~~~~ 192 (325)
T 3jyn_A 134 QTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVS---SPEKAAHAKALGAWETIDY 192 (325)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEES---SHHHHHHHHHHTCSEEEET
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCCEEEeC
Confidence 4466888888555555899999999999999998766654 5678888889998765543
No 47
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=90.99 E-value=2.5 Score=37.45 Aligned_cols=58 Identities=22% Similarity=0.240 Sum_probs=43.1
Q ss_pred HHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 024040 59 AEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVY 119 (273)
Q Consensus 59 a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~ 119 (273)
+.+...+++|++ |+...+|.-|...+..|+.+|.+.++.+. .++.|++.++.+||+++
T Consensus 177 al~~~~~~~g~~-VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~--~~~~~~~~a~~lGa~~i 234 (398)
T 1kol_A 177 GAVTAGVGPGST-VYVAGAGPVGLAAAASARLLGAAVVIVGD--LNPARLAHAKAQGFEIA 234 (398)
T ss_dssp HHHHTTCCTTCE-EEEECCSHHHHHHHHHHHHTTCSEEEEEE--SCHHHHHHHHHTTCEEE
T ss_pred HHHHcCCCCCCE-EEEECCcHHHHHHHHHHHHCCCCeEEEEc--CCHHHHHHHHHcCCcEE
Confidence 444556788887 54455799999999999999995444442 25688999999999843
No 48
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=90.84 E-value=2.7 Score=36.30 Aligned_cols=63 Identities=19% Similarity=0.177 Sum_probs=48.6
Q ss_pred HHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC
Q 024040 59 AEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPA 124 (273)
Q Consensus 59 a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~ 124 (273)
+.....+.+|++ |+...+|.-|...+..|+.+|...++.+. .++.|++..+.+||+.+.-..+
T Consensus 152 ~~~~~~~~~g~~-VlV~GaG~vG~~aiq~ak~~G~~~vi~~~--~~~~k~~~a~~lGa~~~i~~~~ 214 (346)
T 4a2c_A 152 AFHLAQGCENKN-VIIIGAGTIGLLAIQCAVALGAKSVTAID--ISSEKLALAKSFGAMQTFNSSE 214 (346)
T ss_dssp HHHHTTCCTTSE-EEEECCSHHHHHHHHHHHHTTCSEEEEEE--SCHHHHHHHHHTTCSEEEETTT
T ss_pred HHHHhccCCCCE-EEEECCCCcchHHHHHHHHcCCcEEEEEe--chHHHHHHHHHcCCeEEEeCCC
Confidence 445556778877 55566788999999999999999877764 3578899999999987765543
No 49
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=90.73 E-value=2.5 Score=36.48 Aligned_cols=58 Identities=28% Similarity=0.335 Sum_probs=44.9
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHH-HHcCCEEEEe
Q 024040 61 DKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIIL-RALGAEVYLA 121 (273)
Q Consensus 61 ~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~-~~~Ga~v~~~ 121 (273)
+...+++|++.+|+..+|..|.+++..++..|.+++++.. ++.+++.+ +.+|++.+.-
T Consensus 143 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~~g~~~~~~ 201 (336)
T 4b7c_A 143 DVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAG---GAEKCRFLVEELGFDGAID 201 (336)
T ss_dssp HTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCCSEEEE
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHHcCCCEEEE
Confidence 5667888888666666799999999999999997766643 45778887 8899975543
No 50
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=90.67 E-value=2.4 Score=36.57 Aligned_cols=59 Identities=22% Similarity=0.313 Sum_probs=45.2
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 024040 61 DKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLAD 122 (273)
Q Consensus 61 ~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~ 122 (273)
+...+++|++.+|...+|.-|.+++..++..|.+++++.. ++.+++.++.+|++.+...
T Consensus 142 ~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~ga~~~~~~ 200 (334)
T 3qwb_A 142 EAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVAS---TDEKLKIAKEYGAEYLINA 200 (334)
T ss_dssp TTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEEET
T ss_pred HhccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCcEEEeC
Confidence 3456788887555555899999999999999998766654 4678888899998765543
No 51
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=90.39 E-value=2.3 Score=37.05 Aligned_cols=59 Identities=20% Similarity=0.157 Sum_probs=45.7
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 024040 61 DKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLAD 122 (273)
Q Consensus 61 ~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~ 122 (273)
+...+++|++.+|...+|.-|.+++..++..|.+++++.. ++.+++.++.+|++.+...
T Consensus 161 ~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~~~~~ 219 (353)
T 4dup_A 161 QMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAG---STGKCEACERLGAKRGINY 219 (353)
T ss_dssp TTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHTCSEEEET
T ss_pred HhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHhcCCCEEEeC
Confidence 5567888888555557899999999999999998666543 4678888888999865543
No 52
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=90.03 E-value=2.8 Score=36.72 Aligned_cols=60 Identities=27% Similarity=0.282 Sum_probs=45.4
Q ss_pred HHH-HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 024040 58 DAE-DKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLA 121 (273)
Q Consensus 58 ~a~-~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~ 121 (273)
.++ +...+++|++.+|. .+|..|.+.+..|+.+|.+++++.+ ++.+++.++.+||+.+.-
T Consensus 179 ~al~~~~~~~~g~~VlV~-G~G~vG~~a~qla~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~vi~ 239 (363)
T 3uog_A 179 FALVEKGHLRAGDRVVVQ-GTGGVALFGLQIAKATGAEVIVTSS---SREKLDRAFALGADHGIN 239 (363)
T ss_dssp HHHTTTTCCCTTCEEEEE-SSBHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHTCSEEEE
T ss_pred HHHHHhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCEEEEEec---CchhHHHHHHcCCCEEEc
Confidence 344 56678888884554 5899999999999999998766643 567888889999975543
No 53
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=89.40 E-value=3.3 Score=35.89 Aligned_cols=54 Identities=30% Similarity=0.341 Sum_probs=43.7
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE
Q 024040 61 DKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEV 118 (273)
Q Consensus 61 ~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v 118 (273)
+...+++|++.+|...+|..|.+++..|+..|.+++++ .+..+++.++.+|++.
T Consensus 144 ~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~----~~~~~~~~~~~lGa~~ 197 (343)
T 3gaz_A 144 DRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT----ARGSDLEYVRDLGATP 197 (343)
T ss_dssp TTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE----ECHHHHHHHHHHTSEE
T ss_pred HhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE----eCHHHHHHHHHcCCCE
Confidence 56778888885555558999999999999999986665 2467888899999998
No 54
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=89.12 E-value=2.1 Score=37.15 Aligned_cols=61 Identities=26% Similarity=0.396 Sum_probs=45.4
Q ss_pred HHH-HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 024040 58 DAE-DKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLA 121 (273)
Q Consensus 58 ~a~-~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~ 121 (273)
.+. +...+++|++.+|...+|..|.+++..|+.+|.+++++... ..+++.++.+|++.+.-
T Consensus 149 ~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~---~~~~~~~~~~ga~~v~~ 210 (342)
T 4eye_A 149 FAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNR---TAATEFVKSVGADIVLP 210 (342)
T ss_dssp HHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS---GGGHHHHHHHTCSEEEE
T ss_pred HHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHhcCCcEEec
Confidence 344 56678888885566666999999999999999987766543 35667777889876543
No 55
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=88.78 E-value=2.7 Score=36.97 Aligned_cols=61 Identities=21% Similarity=0.255 Sum_probs=44.5
Q ss_pred HHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 024040 58 DAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLA 121 (273)
Q Consensus 58 ~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~ 121 (273)
.+.+...+++|++ |+...+|..|.+.+..|+.+|.+-++.+. .++.|++..+.+||+.+.-
T Consensus 173 ~~l~~~~~~~g~~-VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~--~~~~~~~~a~~lGa~~vi~ 233 (370)
T 4ej6_A 173 HGVDLSGIKAGST-VAILGGGVIGLLTVQLARLAGATTVILST--RQATKRRLAEEVGATATVD 233 (370)
T ss_dssp HHHHHHTCCTTCE-EEEECCSHHHHHHHHHHHHTTCSEEEEEC--SCHHHHHHHHHHTCSEEEC
T ss_pred HHHHhcCCCCCCE-EEEECCCHHHHHHHHHHHHcCCCEEEEEC--CCHHHHHHHHHcCCCEEEC
Confidence 3445556788887 44455699999999999999995444443 3568888999999986554
No 56
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=88.72 E-value=2.9 Score=35.82 Aligned_cols=60 Identities=28% Similarity=0.386 Sum_probs=45.2
Q ss_pred HHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 024040 58 DAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLA 121 (273)
Q Consensus 58 ~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~ 121 (273)
++.+...+++|++.+|...+|..|.+.+..|+.+|.+++++. +..+++.++.+||+.+.-
T Consensus 143 ~al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~----~~~~~~~~~~lGa~~~i~ 202 (321)
T 3tqh_A 143 QALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA----SKRNHAFLKALGAEQCIN 202 (321)
T ss_dssp HHHHHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE----CHHHHHHHHHHTCSEEEE
T ss_pred HHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe----ccchHHHHHHcCCCEEEe
Confidence 445667788988844444589999999999999999866654 345688889999985543
No 57
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=88.54 E-value=2.4 Score=36.73 Aligned_cols=60 Identities=15% Similarity=0.206 Sum_probs=44.5
Q ss_pred HHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 024040 60 EDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLAD 122 (273)
Q Consensus 60 ~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~ 122 (273)
.+...+++|.+.+|...+|..|.+++..|+.+|.+++++.... .+++.++.+|++.+.-.
T Consensus 137 ~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~---~~~~~~~~lga~~~~~~ 196 (340)
T 3gms_A 137 TETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNN---KHTEELLRLGAAYVIDT 196 (340)
T ss_dssp HTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSS---TTHHHHHHHTCSEEEET
T ss_pred HHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHhCCCcEEEeC
Confidence 3566788888856666667899999999999999877765432 45677777899865543
No 58
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=88.40 E-value=2.2 Score=37.07 Aligned_cols=59 Identities=17% Similarity=0.115 Sum_probs=43.9
Q ss_pred HHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEEEE
Q 024040 58 DAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGY-KLIIIMPSTYSIERRIILRALGAEVYL 120 (273)
Q Consensus 58 ~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~-~~~i~~p~~~~~~~~~~~~~~Ga~v~~ 120 (273)
++.+...+++|++ |+...+|..|.+.+..|+.+|. +++++ . .++.|++.++.+||+.+.
T Consensus 157 ~al~~~~~~~g~~-VlV~GaG~vG~~a~qla~~~Ga~~Vi~~-~--~~~~~~~~~~~lGa~~vi 216 (352)
T 3fpc_A 157 HGAELANIKLGDT-VCVIGIGPVGLMSVAGANHLGAGRIFAV-G--SRKHCCDIALEYGATDII 216 (352)
T ss_dssp HHHHHTTCCTTCC-EEEECCSHHHHHHHHHHHTTTCSSEEEE-C--CCHHHHHHHHHHTCCEEE
T ss_pred HHHHhcCCCCCCE-EEEECCCHHHHHHHHHHHHcCCcEEEEE-C--CCHHHHHHHHHhCCceEE
Confidence 3456666888888 4444579999999999999998 55554 2 356788999999997554
No 59
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=88.31 E-value=1.8 Score=38.13 Aligned_cols=52 Identities=21% Similarity=0.074 Sum_probs=40.3
Q ss_pred CCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 024040 66 TPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLA 121 (273)
Q Consensus 66 ~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~ 121 (273)
.+|.+.+|...+|..|.+.+..|+.+|.+++++. ++.|++.++.+||+.++-
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~----~~~~~~~~~~lGa~~vi~ 214 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC----SPHNFDLAKSRGAEEVFD 214 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE----CGGGHHHHHHTTCSEEEE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe----CHHHHHHHHHcCCcEEEE
Confidence 6777755555669999999999999999876654 356888999999975554
No 60
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=88.27 E-value=4.3 Score=35.46 Aligned_cols=58 Identities=24% Similarity=0.334 Sum_probs=43.9
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 024040 61 DKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLA 121 (273)
Q Consensus 61 ~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~ 121 (273)
+.+.+++|.+.+|...+|..|.+++..|+..|.+++++.+ ++.+++.++.+|++.+..
T Consensus 157 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~---~~~~~~~~~~~Ga~~~~~ 214 (362)
T 2c0c_A 157 ELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCS---SDEKSAFLKSLGCDRPIN 214 (362)
T ss_dssp HHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEEE
T ss_pred HhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEEC---CHHHHHHHHHcCCcEEEe
Confidence 3456778887555555799999999999999998666554 467888888999986554
No 61
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=86.89 E-value=5.4 Score=34.43 Aligned_cols=59 Identities=22% Similarity=0.210 Sum_probs=44.0
Q ss_pred HHHHc-CCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 024040 58 DAEDK-GLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVY 119 (273)
Q Consensus 58 ~a~~~-g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~ 119 (273)
.+... ..+++|.+.+|+..+|..|.+++..++..|.+++++.. ++.+++.++.+|++.+
T Consensus 156 ~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~---~~~~~~~~~~~ga~~~ 215 (343)
T 2eih_A 156 QMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAG---SEDKLRRAKALGADET 215 (343)
T ss_dssp HHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHTCSEE
T ss_pred HHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHhcCCCEE
Confidence 34444 46788888666667699999999999999997666543 4577777888898654
No 62
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=86.59 E-value=6 Score=34.38 Aligned_cols=57 Identities=19% Similarity=0.194 Sum_probs=43.6
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 024040 61 DKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYL 120 (273)
Q Consensus 61 ~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~ 120 (273)
+...+++|.+.+|+..+|..|.+++..++..|.+++++.. ++.+++.++.+|++...
T Consensus 156 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~g~~~~~ 212 (354)
T 2j8z_A 156 LVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAG---SQKKLQMAEKLGAAAGF 212 (354)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHTCSEEE
T ss_pred HhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHcCCcEEE
Confidence 4566788887566656899999999999999998666543 45777888889987554
No 63
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=86.59 E-value=6.8 Score=34.09 Aligned_cols=60 Identities=18% Similarity=0.152 Sum_probs=43.9
Q ss_pred HHHHc--CCCCCCCeEEEeeCCChHHHHHHHHHHHc-CCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 024040 58 DAEDK--GLITPGKTVLIELTSGNTGIGLAFIAASR-GYKLIIIMPSTYSIERRIILRALGAEVYLA 121 (273)
Q Consensus 58 ~a~~~--g~~~~g~~~vv~~ssGN~g~a~A~~a~~~-g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~ 121 (273)
.+... ..+++|++ |+....|..|...+..|+.+ |.+++++.+ ++.|++.++.+||+.+.-
T Consensus 175 ~al~~~~~~~~~g~~-VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~vi~ 237 (359)
T 1h2b_A 175 RAVKKAARTLYPGAY-VAIVGVGGLGHIAVQLLKVMTPATVIALDV---KEEKLKLAERLGADHVVD 237 (359)
T ss_dssp HHHHHHHTTCCTTCE-EEEECCSHHHHHHHHHHHHHCCCEEEEEES---SHHHHHHHHHTTCSEEEE
T ss_pred HHHHhhccCCCCCCE-EEEECCCHHHHHHHHHHHHcCCCeEEEEeC---CHHHHHHHHHhCCCEEEe
Confidence 34444 66788887 55555588999999999999 997555443 467889999999975543
No 64
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=86.38 E-value=3.2 Score=35.99 Aligned_cols=51 Identities=18% Similarity=0.275 Sum_probs=38.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLAD 122 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~ 122 (273)
...+|...+|.-|.+++..|+.+|.+++++.+ ++.+++.++.+|++.+.-.
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~---~~~~~~~~~~~Ga~~~~~~ 216 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVR---RDEQIALLKDIGAAHVLNE 216 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEES---CGGGHHHHHHHTCSEEEET
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCCEEEEC
Confidence 45455558899999999999999998776654 3456778888999765544
No 65
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=86.36 E-value=7.8 Score=33.16 Aligned_cols=57 Identities=25% Similarity=0.325 Sum_probs=43.2
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 024040 61 DKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYL 120 (273)
Q Consensus 61 ~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~ 120 (273)
+...+++|.+.+|+..+|..|.+++..++..|.+++++.. +..+++.++.+|++...
T Consensus 139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~---~~~~~~~~~~~g~~~~~ 195 (333)
T 1v3u_A 139 EVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAG---SDEKIAYLKQIGFDAAF 195 (333)
T ss_dssp TTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEE
T ss_pred HhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHhcCCcEEE
Confidence 4556778888677777799999999999999997666543 45677777888986443
No 66
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=86.25 E-value=5.7 Score=34.70 Aligned_cols=59 Identities=20% Similarity=0.280 Sum_probs=42.7
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 024040 61 DKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLAD 122 (273)
Q Consensus 61 ~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~ 122 (273)
+...+++|++.+|. .+|.-|..++..|+.+|.+.++.+. .++.|++.++.+|++.+.-.
T Consensus 184 ~~~~~~~g~~VlV~-GaG~vG~~a~qlak~~Ga~~Vi~~~--~~~~~~~~a~~lGa~~vi~~ 242 (371)
T 1f8f_A 184 NALKVTPASSFVTW-GAGAVGLSALLAAKVCGASIIIAVD--IVESRLELAKQLGATHVINS 242 (371)
T ss_dssp TTTCCCTTCEEEEE-SCSHHHHHHHHHHHHHTCSEEEEEE--SCHHHHHHHHHHTCSEEEET
T ss_pred hccCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCeEEEEC--CCHHHHHHHHHcCCCEEecC
Confidence 45667888874444 5788999999999999985333332 25678888899999765543
No 67
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=85.90 E-value=9.5 Score=33.09 Aligned_cols=60 Identities=25% Similarity=0.319 Sum_probs=45.1
Q ss_pred HHH-HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 024040 58 DAE-DKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYL 120 (273)
Q Consensus 58 ~a~-~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~ 120 (273)
.+. +...+++|.+.+|+..+|..|.+++..++..|.+++++.. ++.+++.++.+|++.+.
T Consensus 160 ~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~ga~~~~ 220 (351)
T 1yb5_A 160 RALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAG---TEEGQKIVLQNGAHEVF 220 (351)
T ss_dssp HHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEE
T ss_pred HHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC---ChhHHHHHHHcCCCEEE
Confidence 344 3566788888666666799999999999999998666543 45777788889987544
No 68
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=85.77 E-value=2.9 Score=36.28 Aligned_cols=58 Identities=14% Similarity=0.137 Sum_probs=42.7
Q ss_pred HHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 024040 59 AEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYL 120 (273)
Q Consensus 59 a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~ 120 (273)
+++...+++|++.+| ..+|..|.+.+..|+.+|.+++++.. ++.|++.++.+||+.+.
T Consensus 168 ~l~~~~~~~g~~VlV-~GaG~vG~~a~qla~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~v~ 225 (348)
T 3two_A 168 PLKFSKVTKGTKVGV-AGFGGLGSMAVKYAVAMGAEVSVFAR---NEHKKQDALSMGVKHFY 225 (348)
T ss_dssp HHHHTTCCTTCEEEE-ESCSHHHHHHHHHHHHTTCEEEEECS---SSTTHHHHHHTTCSEEE
T ss_pred HHHhcCCCCCCEEEE-ECCcHHHHHHHHHHHHCCCeEEEEeC---CHHHHHHHHhcCCCeec
Confidence 444446788887444 55699999999999999997666543 33567788889998766
No 69
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=85.72 E-value=7.4 Score=33.61 Aligned_cols=60 Identities=25% Similarity=0.232 Sum_probs=43.7
Q ss_pred HHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHc-CCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 024040 59 AEDKGLITPGKTVLIELTSGNTGIGLAFIAASR-GYKLIIIMPSTYSIERRIILRALGAEVYLA 121 (273)
Q Consensus 59 a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~-g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~ 121 (273)
+.+...+++|.+.+|+..+|..|.+++..++.. |.+++++.. ++.+++.++.+|++.+.-
T Consensus 162 ~l~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~---~~~~~~~~~~~g~~~~~~ 222 (347)
T 1jvb_A 162 AVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDV---REEAVEAAKRAGADYVIN 222 (347)
T ss_dssp HHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEES---SHHHHHHHHHHTCSEEEE
T ss_pred HHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcC---CHHHHHHHHHhCCCEEec
Confidence 344456778888666666668999999999999 998665543 457778888889875543
No 70
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=85.31 E-value=8.7 Score=33.93 Aligned_cols=58 Identities=22% Similarity=0.133 Sum_probs=43.0
Q ss_pred HHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEEE
Q 024040 58 DAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGY-KLIIIMPSTYSIERRIILRALGAEVY 119 (273)
Q Consensus 58 ~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~-~~~i~~p~~~~~~~~~~~~~~Ga~v~ 119 (273)
.+.+...+++|++ |+...+|.-|...+..|+.+|. +++++.+ ++.+++.++.+||+++
T Consensus 176 ~al~~~~~~~g~~-VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~a~~lGa~~i 234 (398)
T 2dph_A 176 HGCVSAGVKPGSH-VYIAGAGPVGRCAAAGARLLGAACVIVGDQ---NPERLKLLSDAGFETI 234 (398)
T ss_dssp HHHHHTTCCTTCE-EEEECCSHHHHHHHHHHHHHTCSEEEEEES---CHHHHHHHHTTTCEEE
T ss_pred HHHHHcCCCCCCE-EEEECCCHHHHHHHHHHHHcCCCEEEEEcC---CHHHHHHHHHcCCcEE
Confidence 3445566888887 5555569899999999999998 5555443 4678888999999743
No 71
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=85.23 E-value=4.2 Score=36.15 Aligned_cols=57 Identities=28% Similarity=0.411 Sum_probs=42.2
Q ss_pred CCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 024040 63 GLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLAD 122 (273)
Q Consensus 63 g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~ 122 (273)
+.+++|++ |+...+|..|.+.+..|+.+|..-++.+. .++.|++.++.+||+.++-.
T Consensus 209 ~~~~~g~~-VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~--~~~~~~~~~~~lGa~~vi~~ 265 (404)
T 3ip1_A 209 GGIRPGDN-VVILGGGPIGLAAVAILKHAGASKVILSE--PSEVRRNLAKELGADHVIDP 265 (404)
T ss_dssp CCCCTTCE-EEEECCSHHHHHHHHHHHHTTCSEEEEEC--SCHHHHHHHHHHTCSEEECT
T ss_pred cCCCCCCE-EEEECCCHHHHHHHHHHHHcCCCEEEEEC--CCHHHHHHHHHcCCCEEEcC
Confidence 36788887 44455699999999999999994444442 35688999999999865543
No 72
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=85.02 E-value=4.6 Score=35.16 Aligned_cols=63 Identities=17% Similarity=0.119 Sum_probs=44.3
Q ss_pred HHHHc-CCCCCC-CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEE
Q 024040 58 DAEDK-GLITPG-KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS-IERRIILRALGAEVYL 120 (273)
Q Consensus 58 ~a~~~-g~~~~g-~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~-~~~~~~~~~~Ga~v~~ 120 (273)
.+... +.+++| ++.+|...+|..|..++..|+.+|.+.++++..... ..+.+.++.+||+.+.
T Consensus 156 ~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi 221 (364)
T 1gu7_A 156 LMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVI 221 (364)
T ss_dssp HHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEE
T ss_pred HHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEE
Confidence 34443 567888 774555556999999999999999998877754333 2345666889997544
No 73
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=84.95 E-value=1.9 Score=36.88 Aligned_cols=59 Identities=14% Similarity=0.113 Sum_probs=44.8
Q ss_pred HHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 024040 57 KDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYL 120 (273)
Q Consensus 57 ~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~ 120 (273)
.++.+...+++|++ |+....|..|.+.+..|+.+|.+++++. ++.|++.++.+||+.+.
T Consensus 132 ~~al~~~~~~~g~~-VlV~GaG~vG~~a~qlak~~Ga~Vi~~~----~~~~~~~~~~lGa~~v~ 190 (315)
T 3goh_A 132 WQAFEKIPLTKQRE-VLIVGFGAVNNLLTQMLNNAGYVVDLVS----ASLSQALAAKRGVRHLY 190 (315)
T ss_dssp HHHHTTSCCCSCCE-EEEECCSHHHHHHHHHHHHHTCEEEEEC----SSCCHHHHHHHTEEEEE
T ss_pred HHHHhhcCCCCCCE-EEEECCCHHHHHHHHHHHHcCCEEEEEE----ChhhHHHHHHcCCCEEE
Confidence 34556777889888 5444449999999999999999766665 33567788889998665
No 74
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=84.75 E-value=4.7 Score=35.50 Aligned_cols=53 Identities=28% Similarity=0.339 Sum_probs=40.0
Q ss_pred CCCeEEEee-CCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 024040 67 PGKTVLIEL-TSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLAD 122 (273)
Q Consensus 67 ~g~~~vv~~-ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~ 122 (273)
+|.+.+|.. .+|..|.+.+..|+.+|.+++++.. ++.|++.++.+||+.+...
T Consensus 170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~~~~~ 223 (379)
T 3iup_A 170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVR---KQEQADLLKAQGAVHVCNA 223 (379)
T ss_dssp TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEES---SHHHHHHHHHTTCSCEEET
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEC---CHHHHHHHHhCCCcEEEeC
Confidence 345535542 7788999999999999998776653 5688999999999855543
No 75
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=84.70 E-value=8.3 Score=32.90 Aligned_cols=60 Identities=20% Similarity=0.136 Sum_probs=44.1
Q ss_pred HHHH-cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 024040 58 DAED-KGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYL 120 (273)
Q Consensus 58 ~a~~-~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~ 120 (273)
.+.. ...+++|.+.+|+..+|..|.+++..++..|.+++++.. ++.+++.++.+|++...
T Consensus 130 ~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~---~~~~~~~~~~~g~~~~~ 190 (327)
T 1qor_A 130 YLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVG---TAQKAQSALKAGAWQVI 190 (327)
T ss_dssp HHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEES---SHHHHHHHHHHTCSEEE
T ss_pred HHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHcCCCEEE
Confidence 3443 566788887566666899999999999999997666543 35677777778886543
No 76
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=84.69 E-value=5.8 Score=34.49 Aligned_cols=60 Identities=25% Similarity=0.346 Sum_probs=45.1
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEE
Q 024040 61 DKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS-IERRIILRALGAEVYL 120 (273)
Q Consensus 61 ~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~-~~~~~~~~~~Ga~v~~ 120 (273)
+.+.+++|++.+|...+|..|...+..|+.+|.+.++++..... ..+++.++.+||+.+.
T Consensus 161 ~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi 221 (357)
T 1zsy_A 161 DFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVI 221 (357)
T ss_dssp HSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEE
T ss_pred HHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEE
Confidence 44668888885555556999999999999999998887755433 4567788899997544
No 77
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=84.68 E-value=8.2 Score=33.04 Aligned_cols=60 Identities=23% Similarity=0.243 Sum_probs=43.9
Q ss_pred HHHH-cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 024040 58 DAED-KGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYL 120 (273)
Q Consensus 58 ~a~~-~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~ 120 (273)
.+.. ...+++|.+.+|+..+|..|.+++..++..|.+++++.. ++.+++.++.+|++...
T Consensus 135 ~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~---~~~~~~~~~~~g~~~~~ 195 (333)
T 1wly_A 135 YLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVS---TEEKAETARKLGCHHTI 195 (333)
T ss_dssp HHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHTCSEEE
T ss_pred HHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCCEEE
Confidence 3443 566788887566555788999999999999997666544 35677777888987544
No 78
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=84.62 E-value=11 Score=32.54 Aligned_cols=60 Identities=23% Similarity=0.338 Sum_probs=43.4
Q ss_pred HHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 024040 58 DAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYL 120 (273)
Q Consensus 58 ~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~ 120 (273)
.+.+...+++|.+.+|+..+|..|.+++..++..|.+++++... +.+++.++.+|++.+.
T Consensus 160 ~~l~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~---~~~~~~~~~~g~~~~~ 219 (347)
T 2hcy_A 160 KALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGG---EGKEELFRSIGGEVFI 219 (347)
T ss_dssp HHHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECS---TTHHHHHHHTTCCEEE
T ss_pred HHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCC---HHHHHHHHHcCCceEE
Confidence 34444457788886777777999999999999999987766543 2455677788987443
No 79
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=84.48 E-value=5.2 Score=35.16 Aligned_cols=59 Identities=34% Similarity=0.349 Sum_probs=44.3
Q ss_pred HHHHcCC-CCCCCeEEEeeCCChHHHHHHHHHHHcC-CeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 024040 58 DAEDKGL-ITPGKTVLIELTSGNTGIGLAFIAASRG-YKLIIIMPSTYSIERRIILRALGAEVYL 120 (273)
Q Consensus 58 ~a~~~g~-~~~g~~~vv~~ssGN~g~a~A~~a~~~g-~~~~i~~p~~~~~~~~~~~~~~Ga~v~~ 120 (273)
.+.+... +++|.+.+|.. +|..|.+++..|+.+| .+++++.+ ++.+++.++.+||+.+.
T Consensus 185 ~al~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~~~~lGa~~vi 245 (380)
T 1vj0_A 185 HAFDEYPESFAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAG---SPNRLKLAEEIGADLTL 245 (380)
T ss_dssp HHHHTCSSCCBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEES---CHHHHHHHHHTTCSEEE
T ss_pred HHHHhcCCCCCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcC---CHHHHHHHHHcCCcEEE
Confidence 3445556 77888755555 8999999999999999 57766654 46788889999997544
No 80
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=84.43 E-value=2.8 Score=37.99 Aligned_cols=57 Identities=30% Similarity=0.325 Sum_probs=45.4
Q ss_pred CCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 024040 63 GLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLAD 122 (273)
Q Consensus 63 g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~ 122 (273)
..+++|.+.+|...+|..|.+.+..|+.+|.+++++.. ++.|++.++.+||+.+.-.
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~---~~~~~~~~~~lGa~~vi~~ 280 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVS---SPQKAEICRAMGAEAIIDR 280 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHTCCEEEET
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEEC---CHHHHHHHHhhCCcEEEec
Confidence 56788887555555699999999999999998887763 6789999999999866543
No 81
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=84.40 E-value=11 Score=29.45 Aligned_cols=55 Identities=31% Similarity=0.482 Sum_probs=39.1
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE
Q 024040 61 DKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEV 118 (273)
Q Consensus 61 ~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v 118 (273)
+...+++|.+.+|+..+|..|.+++..++..|.+++++.. ++.+.+.++.+|++.
T Consensus 32 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~---~~~~~~~~~~~g~~~ 86 (198)
T 1pqw_A 32 EVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAG---SDAKREMLSRLGVEY 86 (198)
T ss_dssp TTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEES---SHHHHHHHHTTCCSE
T ss_pred HHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHcCCCE
Confidence 3456778877555555788999999999999987666543 355666667777653
No 82
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=84.01 E-value=5.2 Score=32.10 Aligned_cols=74 Identities=20% Similarity=0.339 Sum_probs=52.4
Q ss_pred CCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEe-------c--CCCCHHHHHHHH
Q 024040 42 QPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIM-------P--STYSIERRIILR 112 (273)
Q Consensus 42 ~ptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~-------p--~~~~~~~~~~~~ 112 (273)
+|.--+-+..+...+.+|.+.|. ...||..++|.++..++-.. -| +.++|. | ...+++..+.++
T Consensus 30 ~~G~eNT~~tl~la~era~e~~I----k~iVVASssG~TA~k~~e~~--~~-~lVvVTh~~GF~~pg~~e~~~e~~~~L~ 102 (206)
T 1t57_A 30 EPGKENTERVLELVGERADQLGI----RNFVVASVSGETALRLSEMV--EG-NIVSVTHHAGFREKGQLELEDEARDALL 102 (206)
T ss_dssp SCSGGGHHHHHHHHHHHHHHHTC----CEEEEECSSSHHHHHHHTTC--CS-EEEEECCCTTSSSTTCCSSCHHHHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHHcCC----CEEEEEeCCCHHHHHHHHHc--cC-CEEEEeCcCCCCCCCCCcCCHHHHHHHH
Confidence 55556778888888999999885 45344446688886655422 34 676665 3 135788999999
Q ss_pred HcCCEEEEeC
Q 024040 113 ALGAEVYLAD 122 (273)
Q Consensus 113 ~~Ga~v~~~~ 122 (273)
..|.+|+...
T Consensus 103 ~~G~~V~t~t 112 (206)
T 1t57_A 103 ERGVNVYAGS 112 (206)
T ss_dssp HHTCEEECCS
T ss_pred hCCCEEEEee
Confidence 9999998765
No 83
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=83.93 E-value=4 Score=36.75 Aligned_cols=55 Identities=24% Similarity=0.318 Sum_probs=44.4
Q ss_pred CCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 024040 63 GLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYL 120 (273)
Q Consensus 63 g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~ 120 (273)
..+++|.+.+|...+|.-|.+++..|+..|.+++++.. ++.|++.++.+|++.+.
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~---~~~~~~~~~~lGa~~~i 270 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVS---SAQKEAAVRALGCDLVI 270 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCCCEE
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHhcCCCEEE
Confidence 56788888555555699999999999999998877763 67888999999997654
No 84
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=83.85 E-value=8.4 Score=33.32 Aligned_cols=58 Identities=26% Similarity=0.320 Sum_probs=42.0
Q ss_pred HHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 024040 59 AEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYL 120 (273)
Q Consensus 59 a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~ 120 (273)
+.+...+++|++.+| ..+|..|.+++..|+.+|.++++ +. .++.+++.++.+|++.+.
T Consensus 160 al~~~~~~~g~~VlV-~GaG~vG~~a~qla~~~Ga~Vi~-~~--~~~~~~~~~~~lGa~~~~ 217 (352)
T 1e3j_A 160 ACRRAGVQLGTTVLV-IGAGPIGLVSVLAAKAYGAFVVC-TA--RSPRRLEVAKNCGADVTL 217 (352)
T ss_dssp HHHHHTCCTTCEEEE-ECCSHHHHHHHHHHHHTTCEEEE-EE--SCHHHHHHHHHTTCSEEE
T ss_pred HHHhcCCCCCCEEEE-ECCCHHHHHHHHHHHHcCCEEEE-Ec--CCHHHHHHHHHhCCCEEE
Confidence 334455778887455 45688999999999999998433 32 256788889999997543
No 85
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=83.79 E-value=11 Score=32.52 Aligned_cols=57 Identities=30% Similarity=0.433 Sum_probs=42.7
Q ss_pred HcCCCCCC--CeEEEeeCCChHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHH-cCCEEEE
Q 024040 61 DKGLITPG--KTVLIELTSGNTGIGLAFIAASRGY-KLIIIMPSTYSIERRIILRA-LGAEVYL 120 (273)
Q Consensus 61 ~~g~~~~g--~~~vv~~ssGN~g~a~A~~a~~~g~-~~~i~~p~~~~~~~~~~~~~-~Ga~v~~ 120 (273)
+.+.+++| .+.+|+..+|.-|.+++..++..|. +++++.. +..+++.++. +|++.+.
T Consensus 152 ~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~---~~~~~~~~~~~~g~~~~~ 212 (357)
T 2zb4_A 152 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICG---THEKCILLTSELGFDAAI 212 (357)
T ss_dssp HHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEES---CHHHHHHHHHTSCCSEEE
T ss_pred HhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeC---CHHHHHHHHHHcCCceEE
Confidence 45667888 7766666679999999999999999 7666544 3567777776 8986543
No 86
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=82.57 E-value=10 Score=32.61 Aligned_cols=53 Identities=23% Similarity=0.245 Sum_probs=39.3
Q ss_pred CCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 024040 64 LITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYL 120 (273)
Q Consensus 64 ~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~ 120 (273)
.+++|.+.+|... |..|.+++..++.+|.+++++.. ++.+++.++.+|++.+.
T Consensus 161 ~~~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~~~ 213 (339)
T 1rjw_A 161 GAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDI---GDEKLELAKELGADLVV 213 (339)
T ss_dssp TCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECS---CHHHHHHHHHTTCSEEE
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHCCCCEEe
Confidence 4677777455444 77999999999999997655543 46788888899997543
No 87
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=82.44 E-value=9.3 Score=34.25 Aligned_cols=49 Identities=22% Similarity=0.305 Sum_probs=40.8
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 024040 72 LIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADP 123 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~ 123 (273)
|+.+..|..|..+|...+..|++++++-. ++.+++.++.+|.+++.-+.
T Consensus 7 viIiG~Gr~G~~va~~L~~~g~~vvvId~---d~~~v~~~~~~g~~vi~GDa 55 (413)
T 3l9w_A 7 VIIAGFGRFGQITGRLLLSSGVKMVVLDH---DPDHIETLRKFGMKVFYGDA 55 (413)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEEC---CHHHHHHHHHTTCCCEESCT
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEEC---CHHHHHHHHhCCCeEEEcCC
Confidence 88888999999999999999999888743 46778888888888776654
No 88
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=82.43 E-value=9.8 Score=32.83 Aligned_cols=58 Identities=33% Similarity=0.404 Sum_probs=42.6
Q ss_pred HHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEEEE
Q 024040 58 DAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGY-KLIIIMPSTYSIERRIILRALGAEVYL 120 (273)
Q Consensus 58 ~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~-~~~i~~p~~~~~~~~~~~~~~Ga~v~~ 120 (273)
++.+...+ +|.+.+|... |..|.+++..|+.+|. +++++.. ++.+++.++.+|++.+.
T Consensus 159 ~~l~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~---~~~~~~~~~~~Ga~~~~ 217 (348)
T 2d8a_A 159 DTVLAGPI-SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEP---SDFRRELAKKVGADYVI 217 (348)
T ss_dssp HHHTTSCC-TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECS---CHHHHHHHHHHTCSEEE
T ss_pred HHHHhcCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECC---CHHHHHHHHHhCCCEEE
Confidence 34455566 8877445444 9999999999999998 7666543 46788888899997544
No 89
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=82.23 E-value=13 Score=31.96 Aligned_cols=52 Identities=29% Similarity=0.345 Sum_probs=40.4
Q ss_pred CCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 024040 67 PGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLA 121 (273)
Q Consensus 67 ~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~ 121 (273)
+|++.+|...+|..|.+++..|+.+|.+++++.. ++.+++.++.+|++.+..
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~vi~ 201 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTAS---RNETIEWTKKMGADIVLN 201 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECC---SHHHHHHHHHHTCSEEEC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHhcCCcEEEE
Confidence 7777556657899999999999999997665533 467888899999976543
No 90
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=82.15 E-value=12 Score=32.05 Aligned_cols=57 Identities=21% Similarity=0.215 Sum_probs=42.4
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-HcCCEEEE
Q 024040 61 DKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILR-ALGAEVYL 120 (273)
Q Consensus 61 ~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~-~~Ga~v~~ 120 (273)
+...+++|.+.+|+..+|.-|.+++..++..|.+++++.. ++.+++.++ .+|++...
T Consensus 149 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~---~~~~~~~~~~~~g~~~~~ 206 (345)
T 2j3h_A 149 EVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAG---SKEKVDLLKTKFGFDDAF 206 (345)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTSCCSEEE
T ss_pred HHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHHcCCceEE
Confidence 4556788887566666799999999999999987665543 457777777 68986543
No 91
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=81.87 E-value=7.9 Score=33.90 Aligned_cols=56 Identities=18% Similarity=0.313 Sum_probs=41.3
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEEEE
Q 024040 61 DKGLITPGKTVLIELTSGNTGIGLAFIAASRGY-KLIIIMPSTYSIERRIILRALGAEVYL 120 (273)
Q Consensus 61 ~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~-~~~i~~p~~~~~~~~~~~~~~Ga~v~~ 120 (273)
+...+++|.+ |+....|..|.+.+..|+.+|. +++++-+ ++.|++.++.+||+.+.
T Consensus 187 ~~~~~~~g~~-VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~---~~~~~~~a~~lGa~~vi 243 (378)
T 3uko_A 187 NTAKVEPGSN-VAIFGLGTVGLAVAEGAKTAGASRIIGIDI---DSKKYETAKKFGVNEFV 243 (378)
T ss_dssp TTTCCCTTCC-EEEECCSHHHHHHHHHHHHHTCSCEEEECS---CTTHHHHHHTTTCCEEE
T ss_pred hhcCCCCCCE-EEEECCCHHHHHHHHHHHHcCCCeEEEEcC---CHHHHHHHHHcCCcEEE
Confidence 5566788887 5445569999999999999999 4554432 34678888999997544
No 92
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=81.10 E-value=9.6 Score=33.31 Aligned_cols=54 Identities=24% Similarity=0.242 Sum_probs=40.7
Q ss_pred CCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 024040 65 ITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLAD 122 (273)
Q Consensus 65 ~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~ 122 (273)
+++|++.+|...+|.-|.+++..|+.+|.+++++. +..+++.++.+|++.+.-.
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~----~~~~~~~~~~lGa~~v~~~ 234 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC----SQDASELVRKLGADDVIDY 234 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE----CGGGHHHHHHTTCSEEEET
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe----ChHHHHHHHHcCCCEEEEC
Confidence 77888755555589999999999999998766544 2356778889999865543
No 93
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=79.52 E-value=9.2 Score=33.37 Aligned_cols=56 Identities=21% Similarity=0.237 Sum_probs=40.6
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCe-EEEEecCCCCHHHHHHHHHcCCEEEE
Q 024040 61 DKGLITPGKTVLIELTSGNTGIGLAFIAASRGYK-LIIIMPSTYSIERRIILRALGAEVYL 120 (273)
Q Consensus 61 ~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~-~~i~~p~~~~~~~~~~~~~~Ga~v~~ 120 (273)
+...+++|++ |+...+|.-|...+..|+.+|.. ++++.+ ++.|++.++.+||+.+.
T Consensus 185 ~~~~~~~g~~-VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~a~~lGa~~vi 241 (373)
T 1p0f_A 185 NTAKVTPGST-CAVFGLGGVGFSAIVGCKAAGASRIIGVGT---HKDKFPKAIELGATECL 241 (373)
T ss_dssp TTTCCCTTCE-EEEECCSHHHHHHHHHHHHHTCSEEEEECS---CGGGHHHHHHTTCSEEE
T ss_pred hccCCCCCCE-EEEECCCHHHHHHHHHHHHcCCCeEEEECC---CHHHHHHHHHcCCcEEE
Confidence 4566788887 44455799999999999999984 444432 34677888899997543
No 94
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=79.44 E-value=8.2 Score=33.49 Aligned_cols=58 Identities=22% Similarity=0.342 Sum_probs=42.2
Q ss_pred HHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEEEE
Q 024040 59 AEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGY-KLIIIMPSTYSIERRIILRALGAEVYL 120 (273)
Q Consensus 59 a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~-~~~i~~p~~~~~~~~~~~~~~Ga~v~~ 120 (273)
+.+...+++|++ |+...+|..|...+..|+.+|. +++++.+ ++.|++.++.+|++.+.
T Consensus 163 al~~~~~~~g~~-VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~a~~lGa~~vi 221 (356)
T 1pl8_A 163 ACRRGGVTLGHK-VLVCGAGPIGMVTLLVAKAMGAAQVVVTDL---SATRLSKAKEIGADLVL 221 (356)
T ss_dssp HHHHHTCCTTCE-EEEECCSHHHHHHHHHHHHTTCSEEEEEES---CHHHHHHHHHTTCSEEE
T ss_pred HHHhcCCCCCCE-EEEECCCHHHHHHHHHHHHcCCCEEEEECC---CHHHHHHHHHhCCCEEE
Confidence 344455778887 4445578899999999999999 5554433 56788889999997443
No 95
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=79.25 E-value=4.4 Score=34.67 Aligned_cols=57 Identities=28% Similarity=0.362 Sum_probs=40.7
Q ss_pred HcCCCCCCC-eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 024040 61 DKGLITPGK-TVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYL 120 (273)
Q Consensus 61 ~~g~~~~g~-~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~ 120 (273)
++..+++|. +.+|...+|..|..++..|+.+|.+++++... +.+++.++.+|++.+.
T Consensus 142 ~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~---~~~~~~~~~lGa~~~i 199 (328)
T 1xa0_A 142 EEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGK---AAEHDYLRVLGAKEVL 199 (328)
T ss_dssp HHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESC---TTCHHHHHHTTCSEEE
T ss_pred hhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHcCCcEEE
Confidence 344567765 64555556999999999999999987666553 3466777889997544
No 96
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=78.89 E-value=18 Score=31.02 Aligned_cols=61 Identities=20% Similarity=0.227 Sum_probs=40.5
Q ss_pred HHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHc-CCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 024040 59 AEDKGLITPGKTVLIELTSGNTGIGLAFIAASR-GYKLIIIMPSTYSIERRIILRALGAEVYLADP 123 (273)
Q Consensus 59 a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~-g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~ 123 (273)
+.+...++||++ |+...+|..|...+..++++ |.+++++.+ ++.|++..+.+||+...-..
T Consensus 155 ~l~~~~~~~g~~-VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~---~~~r~~~~~~~Ga~~~i~~~ 216 (348)
T 4eez_A 155 AIKVSGVKPGDW-QVIFGAGGLGNLAIQYAKNVFGAKVIAVDI---NQDKLNLAKKIGADVTINSG 216 (348)
T ss_dssp HHHHHTCCTTCE-EEEECCSHHHHHHHHHHHHTSCCEEEEEES---CHHHHHHHHHTTCSEEEEC-
T ss_pred eecccCCCCCCE-EEEEcCCCccHHHHHHHHHhCCCEEEEEEC---cHHHhhhhhhcCCeEEEeCC
Confidence 344445678877 55556676766666666654 677665543 56889999999998766543
No 97
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=78.86 E-value=7.6 Score=33.72 Aligned_cols=50 Identities=20% Similarity=0.254 Sum_probs=36.0
Q ss_pred CeEEEeeCCChHHHHH-HHHH-HHcCCe-EEEEecCCCCHHHHHHHHHcCCEEE
Q 024040 69 KTVLIELTSGNTGIGL-AFIA-ASRGYK-LIIIMPSTYSIERRIILRALGAEVY 119 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~-A~~a-~~~g~~-~~i~~p~~~~~~~~~~~~~~Ga~v~ 119 (273)
.+ |+....|..|... +..| +.+|.+ ++++.+......|++.++.+||+.+
T Consensus 174 ~~-VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v 226 (357)
T 2b5w_A 174 SS-AFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV 226 (357)
T ss_dssp CE-EEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE
T ss_pred CE-EEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc
Confidence 66 5555459899988 8889 999997 6666553322237788889999866
No 98
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=78.85 E-value=8.9 Score=33.38 Aligned_cols=51 Identities=14% Similarity=0.233 Sum_probs=38.1
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 024040 68 GKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVY 119 (273)
Q Consensus 68 g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~ 119 (273)
|.+.+|... |..|.+++..++.+|.+++++........+++.++.+|++.+
T Consensus 181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v 231 (366)
T 2cdc_A 181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYY 231 (366)
T ss_dssp TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCcee
Confidence 777455555 999999999999999977766543222367788888999876
No 99
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=78.19 E-value=6.6 Score=33.16 Aligned_cols=54 Identities=26% Similarity=0.394 Sum_probs=40.6
Q ss_pred cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 024040 62 KGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVY 119 (273)
Q Consensus 62 ~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~ 119 (273)
.+ +++|++.+|...+|..|.+++..|+.+|.+++++... +.+++.++.+|++.+
T Consensus 121 ~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~---~~~~~~~~~~ga~~~ 174 (302)
T 1iz0_A 121 AQ-ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASR---PEKLALPLALGAEEA 174 (302)
T ss_dssp TT-CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESS---GGGSHHHHHTTCSEE
T ss_pred hc-CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHhcCCCEE
Confidence 56 8888885555566999999999999999976666542 356666778898754
No 100
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=78.17 E-value=6.8 Score=34.08 Aligned_cols=59 Identities=22% Similarity=0.240 Sum_probs=41.1
Q ss_pred HHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 024040 58 DAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYL 120 (273)
Q Consensus 58 ~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~ 120 (273)
.+.....+++|.+ |+....|..|..++..|+.+|.+++++... +.+++.++.+|++.+.
T Consensus 170 ~~l~~~~~~~g~~-VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~---~~~~~~~~~lGa~~v~ 228 (360)
T 1piw_A 170 SPLVRNGCGPGKK-VGIVGLGGIGSMGTLISKAMGAETYVISRS---SRKREDAMKMGADHYI 228 (360)
T ss_dssp HHHHHTTCSTTCE-EEEECCSHHHHHHHHHHHHHTCEEEEEESS---STTHHHHHHHTCSEEE
T ss_pred HHHHHcCCCCCCE-EEEECCCHHHHHHHHHHHHCCCEEEEEcCC---HHHHHHHHHcCCCEEE
Confidence 3444456778877 555555999999999999999986555443 2456677778987544
No 101
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=77.95 E-value=16 Score=31.37 Aligned_cols=54 Identities=22% Similarity=0.309 Sum_probs=40.4
Q ss_pred CCCCCCeEEEeeCCChHHHHHHHHHHHc-CCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 024040 64 LITPGKTVLIELTSGNTGIGLAFIAASR-GYKLIIIMPSTYSIERRIILRALGAEVYLA 121 (273)
Q Consensus 64 ~~~~g~~~vv~~ssGN~g~a~A~~a~~~-g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~ 121 (273)
.+++|++ |+...+|..|.+.+..|+.+ +.+++++. .++.|++.++.+||+.+..
T Consensus 168 ~~~~g~~-vlv~GaG~vG~~a~qla~~~g~~~Vi~~~---~~~~~~~~~~~lGa~~~i~ 222 (345)
T 3jv7_A 168 LLGPGST-AVVIGVGGLGHVGIQILRAVSAARVIAVD---LDDDRLALAREVGADAAVK 222 (345)
T ss_dssp GCCTTCE-EEEECCSHHHHHHHHHHHHHCCCEEEEEE---SCHHHHHHHHHTTCSEEEE
T ss_pred CCCCCCE-EEEECCCHHHHHHHHHHHHcCCCEEEEEc---CCHHHHHHHHHcCCCEEEc
Confidence 5677877 55555699999999999998 66655553 3568899999999986554
No 102
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=77.80 E-value=8.9 Score=33.73 Aligned_cols=65 Identities=28% Similarity=0.328 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHH-cCC-CCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE
Q 024040 50 RIAYSMIKDAED-KGL-ITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEV 118 (273)
Q Consensus 50 R~a~~~~~~a~~-~g~-~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v 118 (273)
||..+.+..+.+ .|. ...|.+ |+....||-|..+|..++.+|.+++ +...+ ..+.+..+.+|++.
T Consensus 155 ~Gv~~~~~~~~~~~G~~~L~Gkt-V~I~G~GnVG~~~A~~l~~~GakVv-vsD~~--~~~~~~a~~~ga~~ 221 (355)
T 1c1d_A 155 VGVFEAMKATVAHRGLGSLDGLT-VLVQGLGAVGGSLASLAAEAGAQLL-VADTD--TERVAHAVALGHTA 221 (355)
T ss_dssp HHHHHHHHHHHHHTTCCCSTTCE-EEEECCSHHHHHHHHHHHHTTCEEE-EECSC--HHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHhcCCCCCCCCE-EEEECcCHHHHHHHHHHHHCCCEEE-EEeCC--ccHHHHHHhcCCEE
Confidence 467777766654 453 345554 8888999999999999999999877 44332 23333344566654
No 103
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=77.23 E-value=13 Score=32.41 Aligned_cols=56 Identities=27% Similarity=0.325 Sum_probs=40.7
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEEEE
Q 024040 61 DKGLITPGKTVLIELTSGNTGIGLAFIAASRGY-KLIIIMPSTYSIERRIILRALGAEVYL 120 (273)
Q Consensus 61 ~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~-~~~i~~p~~~~~~~~~~~~~~Ga~v~~ 120 (273)
+...+++|++.+| ..+|.-|...+..|+.+|. +++++.. ++.|++.++.+||+.+.
T Consensus 189 ~~~~~~~g~~VlV-~GaG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~a~~lGa~~vi 245 (376)
T 1e3i_A 189 NTAKVTPGSTCAV-FGLGCVGLSAIIGCKIAGASRIIAIDI---NGEKFPKAKALGATDCL 245 (376)
T ss_dssp TTSCCCTTCEEEE-ECCSHHHHHHHHHHHHTTCSEEEEECS---CGGGHHHHHHTTCSEEE
T ss_pred HhcCCCCCCEEEE-ECCCHHHHHHHHHHHHcCCCeEEEEcC---CHHHHHHHHHhCCcEEE
Confidence 4566788887444 5579999999999999998 4444432 34677888899997543
No 104
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=77.16 E-value=5.3 Score=34.18 Aligned_cols=57 Identities=25% Similarity=0.361 Sum_probs=40.4
Q ss_pred HcCCCCCCC-eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 024040 61 DKGLITPGK-TVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYL 120 (273)
Q Consensus 61 ~~g~~~~g~-~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~ 120 (273)
++..+++|. +.+|...+|..|..++..|+.+|.+++++... +.|++.++.+|++.+.
T Consensus 143 ~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~---~~~~~~~~~lGa~~v~ 200 (330)
T 1tt7_A 143 EQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGN---REAADYLKQLGASEVI 200 (330)
T ss_dssp HHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESS---SSTHHHHHHHTCSEEE
T ss_pred HhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHcCCcEEE
Confidence 344567765 64555556999999999999999987666654 2456677788987543
No 105
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=77.10 E-value=8.3 Score=33.74 Aligned_cols=58 Identities=22% Similarity=0.205 Sum_probs=41.0
Q ss_pred HHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 024040 59 AEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYL 120 (273)
Q Consensus 59 a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~ 120 (273)
+.....+++|++ |+...+|..|..++..|+.+|.+++++.. ++.+++.++.+|++.+.
T Consensus 186 al~~~~~~~g~~-VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~---~~~~~~~a~~lGa~~vi 243 (369)
T 1uuf_A 186 PLRHWQAGPGKK-VGVVGIGGLGHMGIKLAHAMGAHVVAFTT---SEAKREAAKALGADEVV 243 (369)
T ss_dssp HHHHTTCCTTCE-EEEECCSHHHHHHHHHHHHTTCEEEEEES---SGGGHHHHHHHTCSEEE
T ss_pred HHHhcCCCCCCE-EEEECCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCcEEe
Confidence 333345778887 44455688999999999999998555543 34567777889997554
No 106
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=76.54 E-value=15 Score=31.91 Aligned_cols=56 Identities=18% Similarity=0.345 Sum_probs=40.6
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEEEE
Q 024040 61 DKGLITPGKTVLIELTSGNTGIGLAFIAASRGY-KLIIIMPSTYSIERRIILRALGAEVYL 120 (273)
Q Consensus 61 ~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~-~~~i~~p~~~~~~~~~~~~~~Ga~v~~ 120 (273)
+...+++|++.+| ..+|..|...+..|+.+|. +++++.. ++.+++.++.+|++.+.
T Consensus 186 ~~~~~~~g~~VlV-~GaG~vG~~a~qla~~~Ga~~Vi~~~~---~~~~~~~~~~lGa~~vi 242 (374)
T 1cdo_A 186 NTAKVEPGSTCAV-FGLGAVGLAAVMGCHSAGAKRIIAVDL---NPDKFEKAKVFGATDFV 242 (374)
T ss_dssp TTTCCCTTCEEEE-ECCSHHHHHHHHHHHHTTCSEEEEECS---CGGGHHHHHHTTCCEEE
T ss_pred hccCCCCCCEEEE-ECCCHHHHHHHHHHHHcCCCEEEEEcC---CHHHHHHHHHhCCceEE
Confidence 4566788887455 4579999999999999998 4444432 45677888899997543
No 107
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=75.99 E-value=16 Score=30.39 Aligned_cols=72 Identities=7% Similarity=-0.077 Sum_probs=48.5
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHHh
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPA-VGFEGFVKKGEEILNR 140 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 140 (273)
+..|||.+++--|+++|..-.+.|.+++++-.........+.++..|.++..+..+ .+.++..+...+..++
T Consensus 8 KvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~ 80 (258)
T 4gkb_A 8 KVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIAT 80 (258)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHH
Confidence 45688888888999999998889999888876655556667777777766655433 2233444444444444
No 108
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=75.85 E-value=15 Score=31.95 Aligned_cols=56 Identities=16% Similarity=0.267 Sum_probs=40.3
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEEEE
Q 024040 61 DKGLITPGKTVLIELTSGNTGIGLAFIAASRGY-KLIIIMPSTYSIERRIILRALGAEVYL 120 (273)
Q Consensus 61 ~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~-~~~i~~p~~~~~~~~~~~~~~Ga~v~~ 120 (273)
+...+++|++.+| ..+|.-|..++..|+.+|. +++++.. ++.+++.++.+|++.+.
T Consensus 185 ~~~~~~~g~~VlV-~GaG~vG~~a~qla~~~Ga~~Vi~~~~---~~~~~~~~~~lGa~~vi 241 (374)
T 2jhf_A 185 KVAKVTQGSTCAV-FGLGGVGLSVIMGCKAAGAARIIGVDI---NKDKFAKAKEVGATECV 241 (374)
T ss_dssp TTTCCCTTCEEEE-ECCSHHHHHHHHHHHHTTCSEEEEECS---CGGGHHHHHHTTCSEEE
T ss_pred hccCCCCCCEEEE-ECCCHHHHHHHHHHHHcCCCeEEEEcC---CHHHHHHHHHhCCceEe
Confidence 4566788887455 4579999999999999998 4444432 34677788889996443
No 109
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=75.82 E-value=21 Score=28.96 Aligned_cols=55 Identities=16% Similarity=0.207 Sum_probs=39.8
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPA 124 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~ 124 (273)
...+|+..+|.-|.++|....+.|.+++++.... .....+.++..|.++..+..+
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~l~~~~~~~~~~~~D 59 (255)
T 2q2v_A 5 KTALVTGSTSGIGLGIAQVLARAGANIVLNGFGD-PAPALAEIARHGVKAVHHPAD 59 (255)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC-CHHHHHHHHTTSCCEEEECCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc-hHHHHHHHHhcCCceEEEeCC
Confidence 4558888889999999999888999877765443 244556666678777766543
No 110
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=75.44 E-value=6.5 Score=33.48 Aligned_cols=56 Identities=23% Similarity=0.309 Sum_probs=40.4
Q ss_pred cCCCCCCC-eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 024040 62 KGLITPGK-TVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYL 120 (273)
Q Consensus 62 ~g~~~~g~-~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~ 120 (273)
+..++|+. +-+|...+|..|.+.+..|+.+|.+++++.+. +.|++.++.+||+-+.
T Consensus 140 ~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~---~~~~~~~~~lGa~~vi 196 (324)
T 3nx4_A 140 DAGIRPQDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSGR---ESTHGYLKSLGANRIL 196 (324)
T ss_dssp HTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESC---GGGHHHHHHHTCSEEE
T ss_pred hcccCCCCCeEEEECCCcHHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHhcCCCEEE
Confidence 33355533 43555556999999999999999987777643 4678888889997654
No 111
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=74.30 E-value=20 Score=29.74 Aligned_cols=56 Identities=13% Similarity=0.010 Sum_probs=40.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPA 124 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~ 124 (273)
...+||..+|--|.++|....+.|.+++++-.........+.++..|.++..+..+
T Consensus 32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D 87 (273)
T 3uf0_A 32 RTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVAD 87 (273)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEec
Confidence 45588888888999999998899999887764322233455666778888766543
No 112
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=73.83 E-value=18 Score=31.06 Aligned_cols=62 Identities=24% Similarity=0.155 Sum_probs=42.5
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHH----HcCCEEEEeC
Q 024040 61 DKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTY--SIERRIILR----ALGAEVYLAD 122 (273)
Q Consensus 61 ~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~--~~~~~~~~~----~~Ga~v~~~~ 122 (273)
+.|.+.+|.+-.+..-.+|.+.|++.+++++|++++++.|+.- ++.-++.++ ..|+.+..+.
T Consensus 139 ~~g~l~~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~ 206 (307)
T 3tpf_A 139 WNKMQNGIAKVAFIGDSNNMCNSWLITAAILGFEISIAMPKNYKISPEIWEFAMKQALISGAKISLGY 206 (307)
T ss_dssp TTCCGGGCCEEEEESCSSHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred HhCCCCCCCEEEEEcCCCccHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEc
Confidence 3455544555233334578999999999999999999999854 333333333 6788887775
No 113
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=73.34 E-value=31 Score=28.01 Aligned_cols=72 Identities=11% Similarity=-0.019 Sum_probs=47.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTY-SIERRIILRALGAEVYLADPAV-GFEGFVKKGEEILNR 140 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~-~~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 140 (273)
...+||..+|--|.++|..-.+.|.+++++-.... .......++..|.++..+..+- +.++..+...+..++
T Consensus 8 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (252)
T 3h7a_A 8 ATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH 81 (252)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh
Confidence 45588888888999999998899999877765422 2334556677788887765432 233444444444444
No 114
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=73.29 E-value=15 Score=31.91 Aligned_cols=56 Identities=14% Similarity=0.296 Sum_probs=40.2
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEEEE
Q 024040 61 DKGLITPGKTVLIELTSGNTGIGLAFIAASRGY-KLIIIMPSTYSIERRIILRALGAEVYL 120 (273)
Q Consensus 61 ~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~-~~~i~~p~~~~~~~~~~~~~~Ga~v~~ 120 (273)
+...+++|++.+| ..+|..|..++..|+.+|. +++++.. ++.|++.++.+|++.+.
T Consensus 184 ~~~~~~~g~~VlV-~GaG~vG~~avqla~~~Ga~~Vi~~~~---~~~~~~~~~~lGa~~vi 240 (373)
T 2fzw_A 184 NTAKLEPGSVCAV-FGLGGVGLAVIMGCKVAGASRIIGVDI---NKDKFARAKEFGATECI 240 (373)
T ss_dssp TTTCCCTTCEEEE-ECCSHHHHHHHHHHHHHTCSEEEEECS---CGGGHHHHHHHTCSEEE
T ss_pred hhcCCCCCCEEEE-ECCCHHHHHHHHHHHHcCCCeEEEEcC---CHHHHHHHHHcCCceEe
Confidence 4566788887455 4569999999999999998 4444432 34677778889986443
No 115
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=73.04 E-value=6.9 Score=33.70 Aligned_cols=51 Identities=14% Similarity=0.161 Sum_probs=39.4
Q ss_pred EEeeCC---ChHHHHHHHHHHHc-CCeEEEEecCC--CCHHHHHHHHHcCCEEEEeC
Q 024040 72 LIELTS---GNTGIGLAFIAASR-GYKLIIIMPST--YSIERRIILRALGAEVYLAD 122 (273)
Q Consensus 72 vv~~ss---GN~g~a~A~~a~~~-g~~~~i~~p~~--~~~~~~~~~~~~Ga~v~~~~ 122 (273)
|+-... +|.+.|++.+++++ |++++++.|+. .++.-++.++..|+++..+.
T Consensus 154 va~vGD~~~~rva~Sl~~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~ 210 (306)
T 4ekn_B 154 IAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKE 210 (306)
T ss_dssp EEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEEES
T ss_pred EEEEcCCCCCcHHHHHHHHHHhcCCCEEEEECCcccccCHHHHHHHHHcCCEEEEEc
Confidence 554444 68899999999999 99999999974 35555666777899887664
No 116
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=72.76 E-value=27 Score=31.45 Aligned_cols=99 Identities=15% Similarity=0.061 Sum_probs=57.8
Q ss_pred CCCCCchhhHHHHHHHHHHHHcCCCC-CCCeEEEeeCCChHHHHHHHHHHH-cCCeEEEEecCCCC-H------------
Q 024040 41 MQPCSSVKDRIAYSMIKDAEDKGLIT-PGKTVLIELTSGNTGIGLAFIAAS-RGYKLIIIMPSTYS-I------------ 105 (273)
Q Consensus 41 ~~ptGS~K~R~a~~~~~~a~~~g~~~-~g~~~vv~~ssGN~g~a~A~~a~~-~g~~~~i~~p~~~~-~------------ 105 (273)
.+|.|.++. ....+.+..+++.+. .+...|||..++--|+|+|...+. .|.+++++-.+... .
T Consensus 35 a~p~g~~~~--v~~qi~y~~~~~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~ 112 (422)
T 3s8m_A 35 THPLGCERN--VLEQIAATRARGVRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSA 112 (422)
T ss_dssp CCHHHHHHH--HHHHHHHHHHTCCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHH
T ss_pred CCchhHHHH--HHHHHHHHhhccccccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhH
Confidence 345555442 234455556666663 345567777777789999998888 99998877543211 1
Q ss_pred HHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHhC
Q 024040 106 ERRIILRALGAEVYLADPAV-GFEGFVKKGEEILNRT 141 (273)
Q Consensus 106 ~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~~ 141 (273)
...+.++..|.++..+..+- +.++..+...+..++.
T Consensus 113 a~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~~~~ 149 (422)
T 3s8m_A 113 AFDKHAKAAGLYSKSINGDAFSDAARAQVIELIKTEM 149 (422)
T ss_dssp HHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHS
T ss_pred HHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 12356677898776665432 2233333444444444
No 117
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=71.25 E-value=20 Score=26.13 Aligned_cols=48 Identities=27% Similarity=0.364 Sum_probs=37.1
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 024040 72 LIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLAD 122 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~ 122 (273)
++....|..|.++|......|.+++++-. ++.+.+.++..|.+++..+
T Consensus 9 v~I~G~G~iG~~la~~L~~~g~~V~~id~---~~~~~~~~~~~~~~~~~gd 56 (141)
T 3llv_A 9 YIVIGSEAAGVGLVRELTAAGKKVLAVDK---SKEKIELLEDEGFDAVIAD 56 (141)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEES---CHHHHHHHHHTTCEEEECC
T ss_pred EEEECCCHHHHHHHHHHHHCCCeEEEEEC---CHHHHHHHHHCCCcEEECC
Confidence 67777899999999999999999887754 4566777777777665544
No 118
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=70.68 E-value=14 Score=32.04 Aligned_cols=58 Identities=26% Similarity=0.194 Sum_probs=39.8
Q ss_pred HHHcCCCC-CCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-HcCCEEEE
Q 024040 59 AEDKGLIT-PGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILR-ALGAEVYL 120 (273)
Q Consensus 59 a~~~g~~~-~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~-~~Ga~v~~ 120 (273)
+.+...+. +|++.+|. .+|.-|..++..|+.+|.+++++.+. +.+++.++ .+|++.+.
T Consensus 171 ~l~~~~~~~~g~~VlV~-GaG~vG~~a~qlak~~Ga~Vi~~~~~---~~~~~~~~~~lGa~~vi 230 (357)
T 2cf5_A 171 PLSHFGLKQPGLRGGIL-GLGGVGHMGVKIAKAMGHHVTVISSS---NKKREEALQDLGADDYV 230 (357)
T ss_dssp HHHHTSTTSTTCEEEEE-CCSHHHHHHHHHHHHHTCEEEEEESS---TTHHHHHHTTSCCSCEE
T ss_pred HHHhcCCCCCCCEEEEE-CCCHHHHHHHHHHHHCCCeEEEEeCC---hHHHHHHHHHcCCceee
Confidence 33334456 78774554 57889999999999999976665543 35666666 89987544
No 119
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=69.94 E-value=44 Score=27.27 Aligned_cols=33 Identities=24% Similarity=0.282 Sum_probs=22.4
Q ss_pred CeEEEeeCCCh--HHHHHHHHHHHcCCeEEEEecC
Q 024040 69 KTVLIELTSGN--TGIGLAFIAASRGYKLIIIMPS 101 (273)
Q Consensus 69 ~~~vv~~ssGN--~g~a~A~~a~~~g~~~~i~~p~ 101 (273)
+..|||..+|+ -|.++|..-.+.|.++++.-..
T Consensus 7 K~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~ 41 (256)
T 4fs3_A 7 KTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRK 41 (256)
T ss_dssp CEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECC
Confidence 45577765443 6777777777888887776543
No 120
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=69.29 E-value=28 Score=28.25 Aligned_cols=72 Identities=15% Similarity=0.083 Sum_probs=43.9
Q ss_pred CeEEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHH-cC-CEEEEeCCCCChhHHHHHHHHHHHhC
Q 024040 69 KTVLIELTS--GNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRA-LG-AEVYLADPAVGFEGFVKKGEEILNRT 141 (273)
Q Consensus 69 ~~~vv~~ss--GN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~-~G-a~v~~~~~~~~~~~~~~~a~~~~~~~ 141 (273)
.+.+||..+ |.-|.++|....+.|.+++++........+++.+.. +| ..++.++- .+.++..+...+..++.
T Consensus 15 k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~~ 90 (271)
T 3ek2_A 15 KRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDV-ADDAQIDALFASLKTHW 90 (271)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCT-TCHHHHHHHHHHHHHHC
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCC-CCHHHHHHHHHHHHHHc
Confidence 455777755 778999999988999998887665444455555533 33 23333432 23444455555555554
No 121
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=68.66 E-value=48 Score=27.22 Aligned_cols=72 Identities=18% Similarity=0.171 Sum_probs=47.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--------HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHH
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS--------IERRIILRALGAEVYLADPAV-GFEGFVKKGEEILN 139 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~--------~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~ 139 (273)
...+||..+|--|.++|..-.+.|.+++++-..... ......++..|.++..+..+- +.++..+...+..+
T Consensus 7 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 86 (274)
T 3e03_A 7 KTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATVD 86 (274)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 455888888889999999988899998877654321 234555667788887765432 23344444444444
Q ss_pred h
Q 024040 140 R 140 (273)
Q Consensus 140 ~ 140 (273)
+
T Consensus 87 ~ 87 (274)
T 3e03_A 87 T 87 (274)
T ss_dssp H
T ss_pred H
Confidence 3
No 122
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=68.19 E-value=50 Score=28.48 Aligned_cols=72 Identities=19% Similarity=0.196 Sum_probs=47.7
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--------HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHH
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS--------IERRIILRALGAEVYLADPAV-GFEGFVKKGEEILN 139 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~--------~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~ 139 (273)
...+||..+|--|.++|....+.|.+++++...... ....+.++..|.++..+..+- +.++..+...+..+
T Consensus 46 k~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~ 125 (346)
T 3kvo_A 46 CTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIK 125 (346)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 455788888889999999988999998887654322 234566778898887765432 33344444444444
Q ss_pred h
Q 024040 140 R 140 (273)
Q Consensus 140 ~ 140 (273)
+
T Consensus 126 ~ 126 (346)
T 3kvo_A 126 K 126 (346)
T ss_dssp H
T ss_pred H
Confidence 3
No 123
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=67.55 E-value=9.9 Score=32.77 Aligned_cols=59 Identities=19% Similarity=0.167 Sum_probs=42.9
Q ss_pred cCCCCCCCeEEEeeCC---ChHHHHHHHHHHHc-CCeEEEEecCCC--CHHHHHHHHHcCCEEEEeC
Q 024040 62 KGLITPGKTVLIELTS---GNTGIGLAFIAASR-GYKLIIIMPSTY--SIERRIILRALGAEVYLAD 122 (273)
Q Consensus 62 ~g~~~~g~~~vv~~ss---GN~g~a~A~~a~~~-g~~~~i~~p~~~--~~~~~~~~~~~Ga~v~~~~ 122 (273)
.|.+. |.+ |+-... +|.+.+++.+++++ |++++++.|+.- ++.-++.++..|+++..+.
T Consensus 149 ~g~l~-gl~-va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~ 213 (310)
T 3csu_A 149 QGRLD-NLH-VAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHS 213 (310)
T ss_dssp HSCSS-SCE-EEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEECS
T ss_pred hCCcC-CcE-EEEECCCCCCchHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHcCCeEEEEc
Confidence 45443 334 555555 68999999999999 999999999853 4445566777888876654
No 124
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=67.54 E-value=19 Score=30.95 Aligned_cols=52 Identities=17% Similarity=0.082 Sum_probs=38.2
Q ss_pred CCCCCCeEEEeeCCChHHHHHHHHHHHc--CCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 024040 64 LITPGKTVLIELTSGNTGIGLAFIAASR--GYKLIIIMPSTYSIERRIILRALGAEVYL 120 (273)
Q Consensus 64 ~~~~g~~~vv~~ssGN~g~a~A~~a~~~--g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~ 120 (273)
.+ +|++ |+....|.-|..++..|+.+ |.+++++.+ ++.|++.++.+||+.+.
T Consensus 168 ~~-~g~~-VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~vi 221 (344)
T 2h6e_A 168 KF-AEPV-VIVNGIGGLAVYTIQILKALMKNITIVGISR---SKKHRDFALELGADYVS 221 (344)
T ss_dssp TC-SSCE-EEEECCSHHHHHHHHHHHHHCTTCEEEEECS---CHHHHHHHHHHTCSEEE
T ss_pred CC-CCCE-EEEECCCHHHHHHHHHHHHhcCCCEEEEEeC---CHHHHHHHHHhCCCEEe
Confidence 45 7777 55555599999999999999 987544432 56788888899996543
No 125
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=67.08 E-value=22 Score=30.79 Aligned_cols=58 Identities=21% Similarity=0.220 Sum_probs=41.6
Q ss_pred HcCCCC-----CCCeEEEeeCCChHHHHHHHHHHH-cCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 024040 61 DKGLIT-----PGKTVLIELTSGNTGIGLAFIAAS-RGYKLIIIMPSTYSIERRIILRALGAEVYLA 121 (273)
Q Consensus 61 ~~g~~~-----~g~~~vv~~ssGN~g~a~A~~a~~-~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~ 121 (273)
+...++ +|.+.+|...+|..|.+.+..|+. .|.+++++.+ ++.|++.++.+||+.+..
T Consensus 160 ~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~---~~~~~~~~~~lGad~vi~ 223 (363)
T 4dvj_A 160 DRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATAS---RPETQEWVKSLGAHHVID 223 (363)
T ss_dssp TTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECS---SHHHHHHHHHTTCSEEEC
T ss_pred HhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeC---CHHHHHHHHHcCCCEEEe
Confidence 445555 666645555589999999999997 5887666543 467888889999976543
No 126
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=67.07 E-value=15 Score=28.24 Aligned_cols=48 Identities=25% Similarity=0.163 Sum_probs=37.1
Q ss_pred EEeeCCChHHHHHHHHHHHc-CCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 024040 72 LIELTSGNTGIGLAFIAASR-GYKLIIIMPSTYSIERRIILRALGAEVYLAD 122 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~~-g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~ 122 (273)
++....|..|..+|...+.. |.+++++-. ++.+.+.++..|.+++..+
T Consensus 42 v~IiG~G~~G~~~a~~L~~~~g~~V~vid~---~~~~~~~~~~~g~~~~~gd 90 (183)
T 3c85_A 42 VLILGMGRIGTGAYDELRARYGKISLGIEI---REEAAQQHRSEGRNVISGD 90 (183)
T ss_dssp EEEECCSHHHHHHHHHHHHHHCSCEEEEES---CHHHHHHHHHTTCCEEECC
T ss_pred EEEECCCHHHHHHHHHHHhccCCeEEEEEC---CHHHHHHHHHCCCCEEEcC
Confidence 66778899999999999888 999887744 4566777777787765543
No 127
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=66.72 E-value=36 Score=29.68 Aligned_cols=105 Identities=15% Similarity=0.079 Sum_probs=66.5
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCCC
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQF 150 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 150 (273)
+|....-|+.|.++|..++.+|++++.+-+. .+.......|++. +. +.+ ++.++. +...++-.
T Consensus 162 tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~----~~~~~~~~~g~~~--~~---~l~-------ell~~a-DiV~l~~P 224 (352)
T 3gg9_A 162 TLGIFGYGKIGQLVAGYGRAFGMNVLVWGRE----NSKERARADGFAV--AE---SKD-------ALFEQS-DVLSVHLR 224 (352)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSH----HHHHHHHHTTCEE--CS---SHH-------HHHHHC-SEEEECCC
T ss_pred EEEEEeECHHHHHHHHHHHhCCCEEEEECCC----CCHHHHHhcCceE--eC---CHH-------HHHhhC-CEEEEecc
Confidence 4777889999999999999999998887543 2344555678752 21 122 233343 45554332
Q ss_pred CCCcchHhhhhchHHHHHHhhCCCcCEEEEecCCCccHH--HHHHHHHhh
Q 024040 151 ENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTGGTVT--GAGRFLKEK 198 (273)
Q Consensus 151 ~~~~~~~~g~~t~~~Ei~~q~~~~~d~iv~p~G~Gg~~~--Gi~~~~k~~ 198 (273)
.++.. ...+..+.+.++ +++.+++-+|.|+..- .+..++++.
T Consensus 225 lt~~t----~~li~~~~l~~m--k~gailIN~aRg~~vd~~aL~~aL~~g 268 (352)
T 3gg9_A 225 LNDET----RSIITVADLTRM--KPTALFVNTSRAELVEENGMVTALNRG 268 (352)
T ss_dssp CSTTT----TTCBCHHHHTTS--CTTCEEEECSCGGGBCTTHHHHHHHHT
T ss_pred CcHHH----HHhhCHHHHhhC--CCCcEEEECCCchhhcHHHHHHHHHhC
Confidence 23322 223455677777 5789999999988653 455555543
No 128
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=66.63 E-value=28 Score=29.95 Aligned_cols=59 Identities=19% Similarity=0.273 Sum_probs=41.3
Q ss_pred cCCCCCCCeEEEeeCC-ChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHH----HcCCEEEEeC
Q 024040 62 KGLITPGKTVLIELTS-GNTGIGLAFIAASRGYKLIIIMPSTY--SIERRIILR----ALGAEVYLAD 122 (273)
Q Consensus 62 ~g~~~~g~~~vv~~ss-GN~g~a~A~~a~~~g~~~~i~~p~~~--~~~~~~~~~----~~Ga~v~~~~ 122 (273)
.|.+. |.+ |+-... +|.+.|++.+++++|++++++.|+.- ++.-++.++ ..|+++..+.
T Consensus 150 ~g~l~-gl~-va~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~ 215 (315)
T 1pvv_A 150 KGTIK-GVK-VVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLH 215 (315)
T ss_dssp HSCCT-TCE-EEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred hCCcC-CcE-EEEECCCcchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 45443 344 444433 89999999999999999999999854 333333333 6899988775
No 129
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=66.55 E-value=7.7 Score=33.44 Aligned_cols=60 Identities=25% Similarity=0.168 Sum_probs=43.7
Q ss_pred HcCCCCCCCeEEEeeCC---ChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHHHcCCEEEEeC
Q 024040 61 DKGLITPGKTVLIELTS---GNTGIGLAFIAASRGYKLIIIMPSTY--SIERRIILRALGAEVYLAD 122 (273)
Q Consensus 61 ~~g~~~~g~~~vv~~ss---GN~g~a~A~~a~~~g~~~~i~~p~~~--~~~~~~~~~~~Ga~v~~~~ 122 (273)
+.|.+. |.+ |+-... +|.+.|++.+++++|++++++.|+.- ++.-.+.++..|+++..+.
T Consensus 149 ~~g~l~-gl~-va~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~ 213 (308)
T 1ml4_A 149 EFGRID-GLK-IGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELREKGMKVVETT 213 (308)
T ss_dssp HSSCSS-SEE-EEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHHHHTTCCEEEES
T ss_pred HhCCCC-CeE-EEEeCCCCcCchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHcCCeEEEEc
Confidence 345443 333 555555 58999999999999999999999853 4445566777899877765
No 130
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=66.55 E-value=22 Score=30.92 Aligned_cols=53 Identities=26% Similarity=0.311 Sum_probs=37.0
Q ss_pred CCC-CCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-HcCCEEEE
Q 024040 64 LIT-PGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILR-ALGAEVYL 120 (273)
Q Consensus 64 ~~~-~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~-~~Ga~v~~ 120 (273)
.+. +|.+.+|. .+|.-|.+++..|+.+|.+++++.+. +.+++.++ .+|++.+.
T Consensus 183 ~~~~~g~~VlV~-GaG~vG~~~~q~a~~~Ga~Vi~~~~~---~~~~~~~~~~lGa~~v~ 237 (366)
T 1yqd_A 183 GLDEPGKHIGIV-GLGGLGHVAVKFAKAFGSKVTVISTS---PSKKEEALKNFGADSFL 237 (366)
T ss_dssp TCCCTTCEEEEE-CCSHHHHHHHHHHHHTTCEEEEEESC---GGGHHHHHHTSCCSEEE
T ss_pred CcCCCCCEEEEE-CCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHhcCCceEE
Confidence 355 77774554 56889999999999999976665543 34555554 78987543
No 131
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=66.50 E-value=6.4 Score=31.09 Aligned_cols=28 Identities=14% Similarity=0.248 Sum_probs=26.1
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 024040 72 LIELTSGNTGIGLAFIAASRGYKLIIIM 99 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~~g~~~~i~~ 99 (273)
|+...+|-.|.++|+..++.|++++||=
T Consensus 5 V~IIGaGpaGL~aA~~La~~G~~V~v~E 32 (336)
T 3kkj_A 5 IAIIGTGIAGLSAAQALTAAGHQVHLFD 32 (336)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEECcCHHHHHHHHHHHHCCCCEEEEE
Confidence 7888999999999999999999999884
No 132
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=66.39 E-value=23 Score=30.80 Aligned_cols=51 Identities=22% Similarity=0.263 Sum_probs=38.5
Q ss_pred EEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHH----HcCCEEEEeC
Q 024040 72 LIELTS--GNTGIGLAFIAASRGYKLIIIMPSTY--SIERRIILR----ALGAEVYLAD 122 (273)
Q Consensus 72 vv~~ss--GN~g~a~A~~a~~~g~~~~i~~p~~~--~~~~~~~~~----~~Ga~v~~~~ 122 (273)
|+-... .|.+.|++.+++++|++++++.|+.- ++.-+..++ ..|+++..+.
T Consensus 158 ia~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~ 216 (333)
T 1duv_G 158 LVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTE 216 (333)
T ss_dssp EEEESCTTSHHHHHHHHHHHHHCCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEES
T ss_pred EEEECCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEE
Confidence 555555 59999999999999999999999853 333333333 7899988875
No 133
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=65.96 E-value=45 Score=26.84 Aligned_cols=54 Identities=22% Similarity=0.154 Sum_probs=37.5
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADP 123 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~ 123 (273)
...+||..+|.-|.++|....+.|.+++++..... ....+.++..|.++..+..
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~ 61 (249)
T 2ew8_A 8 KLAVITGGANGIGRAIAERFAVEGADIAIADLVPA-PEAEAAIRNLGRRVLTVKC 61 (249)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC-HHHHHHHHHTTCCEEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCch-hHHHHHHHhcCCcEEEEEe
Confidence 45588888899999999998889998777654321 2222255667877766543
No 134
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=65.92 E-value=25 Score=30.47 Aligned_cols=59 Identities=14% Similarity=0.178 Sum_probs=41.3
Q ss_pred cCCCCCCCeEEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHH----HcCCEEEEeC
Q 024040 62 KGLITPGKTVLIELTS--GNTGIGLAFIAASRGYKLIIIMPSTY--SIERRIILR----ALGAEVYLAD 122 (273)
Q Consensus 62 ~g~~~~g~~~vv~~ss--GN~g~a~A~~a~~~g~~~~i~~p~~~--~~~~~~~~~----~~Ga~v~~~~ 122 (273)
.|.+. |.+ |+.... +|.+.|++.+++++|++++++.|+.- ++.-++.++ ..|+++..+.
T Consensus 162 ~g~l~-gl~-va~vGD~~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~ 228 (325)
T 1vlv_A 162 FGRLK-GVK-VVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTS 228 (325)
T ss_dssp HSCST-TCE-EEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEES
T ss_pred hCCcC-CcE-EEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEc
Confidence 45443 334 555554 59999999999999999999999853 333333333 6799887775
No 135
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=65.64 E-value=28 Score=28.78 Aligned_cols=73 Identities=14% Similarity=0.025 Sum_probs=46.6
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHHhC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTY-SIERRIILRALGAEVYLADPA-VGFEGFVKKGEEILNRT 141 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~-~~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 141 (273)
+..|||.+++--|+++|..-.+.|.+++++-.... -..-.+.++..|.+++.+..+ .+.++..+...+..++.
T Consensus 8 KvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 8 KVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 45588888888999999998899998777543211 122355677889888766543 23344444444444443
No 136
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=65.31 E-value=35 Score=28.13 Aligned_cols=72 Identities=17% Similarity=-0.010 Sum_probs=44.3
Q ss_pred CeEEEeeCCCh--HHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHHhC
Q 024040 69 KTVLIELTSGN--TGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPA-VGFEGFVKKGEEILNRT 141 (273)
Q Consensus 69 ~~~vv~~ssGN--~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 141 (273)
...+|+..+|+ -|.++|..-.+.|.+++++.... ...+++.+...+.++..+..+ .+.++..+...+..++.
T Consensus 27 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 101 (280)
T 3nrc_A 27 KKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ-FKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVW 101 (280)
T ss_dssp CEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT-CHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch-HHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHc
Confidence 34577776667 88899998888999987776654 556666665544444433322 23444444555555543
No 137
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=65.22 E-value=24 Score=30.26 Aligned_cols=59 Identities=20% Similarity=0.291 Sum_probs=41.4
Q ss_pred cCCCCCCCeEEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHH----HcCCEEEEeC
Q 024040 62 KGLITPGKTVLIELTS--GNTGIGLAFIAASRGYKLIIIMPSTY--SIERRIILR----ALGAEVYLAD 122 (273)
Q Consensus 62 ~g~~~~g~~~vv~~ss--GN~g~a~A~~a~~~g~~~~i~~p~~~--~~~~~~~~~----~~Ga~v~~~~ 122 (273)
.|.+. |.+ |+.... +|.+.|++.+++++|++++++.|+.- +..-++.++ ..|+++..+.
T Consensus 143 ~g~l~-gl~-va~vGD~~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~ 209 (307)
T 2i6u_A 143 KGALR-GLR-LSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTA 209 (307)
T ss_dssp HSCCT-TCE-EEEESCTTSHHHHHHHHHHHHTTCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEES
T ss_pred hCCcC-CeE-EEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEE
Confidence 45443 334 555555 59999999999999999999999854 333333333 6798887775
No 138
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=65.11 E-value=12 Score=33.30 Aligned_cols=49 Identities=18% Similarity=0.174 Sum_probs=36.3
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 024040 68 GKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYL 120 (273)
Q Consensus 68 g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~ 120 (273)
+.+ |+....|+.|++++..++.+|.+++++=+ ...+.+.++.+|++.+.
T Consensus 172 g~~-V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~---~~~~~~~~~~lGa~~~~ 220 (401)
T 1x13_A 172 PAK-VMVIGAGVAGLAAIGAANSLGAIVRAFDT---RPEVKEQVQSMGAEFLE 220 (401)
T ss_dssp CCE-EEEECCSHHHHHHHHHHHHTTCEEEEECS---CGGGHHHHHHTTCEECC
T ss_pred CCE-EEEECCCHHHHHHHHHHHHCCCEEEEEcC---CHHHHHHHHHcCCEEEE
Confidence 444 77788899999999999999997555432 33555666788998653
No 139
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=65.09 E-value=24 Score=30.70 Aligned_cols=51 Identities=25% Similarity=0.280 Sum_probs=38.4
Q ss_pred EEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHH----HcCCEEEEeC
Q 024040 72 LIELTS--GNTGIGLAFIAASRGYKLIIIMPSTY--SIERRIILR----ALGAEVYLAD 122 (273)
Q Consensus 72 vv~~ss--GN~g~a~A~~a~~~g~~~~i~~p~~~--~~~~~~~~~----~~Ga~v~~~~ 122 (273)
|+-... .|.+.|++.+++++|++++++.|+.- ++.-++.++ ..|+++..+.
T Consensus 158 va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~ 216 (335)
T 1dxh_A 158 YAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTE 216 (335)
T ss_dssp EEEESCCSSHHHHHHHHHHHHTTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred EEEecCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 555555 59999999999999999999999853 333333333 6799988775
No 140
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=64.87 E-value=38 Score=27.27 Aligned_cols=73 Identities=10% Similarity=0.161 Sum_probs=46.3
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC-CC-CHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHHhC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPS-TY-SIERRIILRALGAEVYLADPA-VGFEGFVKKGEEILNRT 141 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~-~~-~~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 141 (273)
.+.+||..+|--|.++|..-.+.|.++++.... .. .......++..|.++..+..+ .+.++..+...++.++.
T Consensus 14 k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 89 (256)
T 3ezl_A 14 RIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEV 89 (256)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhc
Confidence 455777777888899999888899988777633 22 233456667778777665433 23344444555555554
No 141
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=64.19 E-value=39 Score=27.90 Aligned_cols=72 Identities=13% Similarity=0.041 Sum_probs=46.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHHh
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTY-SIERRIILRALGAEVYLADPA-VGFEGFVKKGEEILNR 140 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~-~~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 140 (273)
...+||..+|--|.++|....+.|.+++++..... .....+.++..|.++..+..+ .+.++..+...+..++
T Consensus 33 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 106 (276)
T 3r1i_A 33 KRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGE 106 (276)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45588888888999999998899999887765422 233455666777776655433 2334444444444443
No 142
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=64.10 E-value=46 Score=27.44 Aligned_cols=55 Identities=18% Similarity=0.093 Sum_probs=39.3
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-CCHHHHHHHHHcCCEEEEeCC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPST-YSIERRIILRALGAEVYLADP 123 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~-~~~~~~~~~~~~Ga~v~~~~~ 123 (273)
...+||..+|--|.++|....+.|.+++++-... ......+.++..|.++..+..
T Consensus 34 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 89 (275)
T 4imr_A 34 RTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAG 89 (275)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEe
Confidence 4557777888889999999888999987776542 234455666777887766643
No 143
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=63.70 E-value=42 Score=26.96 Aligned_cols=71 Identities=15% Similarity=0.077 Sum_probs=44.3
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHH
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS-IERRIILRALGAEVYLADPAV-GFEGFVKKGEEILN 139 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~-~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~ 139 (273)
...+||..+|.-|.++|..-.+.|.+++++-..... ....+.++..|.++..+..+- +.++..+...+..+
T Consensus 10 k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (253)
T 3qiv_A 10 KVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLA 82 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 455888888889999999999999997776543211 122445566788887765432 23333334444433
No 144
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=63.07 E-value=28 Score=28.23 Aligned_cols=54 Identities=13% Similarity=0.095 Sum_probs=36.7
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcC---CeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRG---YKLIIIMPSTYSIERRIILRALGAEVYLAD 122 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g---~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~ 122 (273)
...+|+..+|--|.++|....+.| .+++++.........++.+...+.++..+.
T Consensus 22 k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~ 78 (267)
T 1sny_A 22 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILE 78 (267)
T ss_dssp SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEE
T ss_pred CEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEE
Confidence 345788888889999999988889 888887765333334455544455565544
No 145
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=63.02 E-value=13 Score=32.69 Aligned_cols=49 Identities=14% Similarity=0.198 Sum_probs=35.6
Q ss_pred CCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 024040 67 PGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVY 119 (273)
Q Consensus 67 ~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~ 119 (273)
++.+ |+....|+.|++++..++.+|.+++++-+. ..+.+..+.+|+++.
T Consensus 171 ~g~~-V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~---~~~~~~~~~~Ga~~~ 219 (384)
T 1l7d_A 171 PPAR-VLVFGVGVAGLQAIATAKRLGAVVMATDVR---AATKEQVESLGGKFI 219 (384)
T ss_dssp CCCE-EEEECCSHHHHHHHHHHHHTTCEEEEECSC---STTHHHHHHTTCEEC
T ss_pred CCCE-EEEECCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHcCCeEE
Confidence 3445 777888999999999999999984444222 234556667999865
No 146
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=62.83 E-value=84 Score=28.00 Aligned_cols=100 Identities=15% Similarity=0.019 Sum_probs=59.0
Q ss_pred CCCCCCchhhHHHHHHHHHHHHcCCCC-CCCeEEEeeCCChHHHHHHHHHHH-cCCeEEEEecCCCC-------------
Q 024040 40 MMQPCSSVKDRIAYSMIKDAEDKGLIT-PGKTVLIELTSGNTGIGLAFIAAS-RGYKLIIIMPSTYS------------- 104 (273)
Q Consensus 40 ~~~ptGS~K~R~a~~~~~~a~~~g~~~-~g~~~vv~~ssGN~g~a~A~~a~~-~g~~~~i~~p~~~~------------- 104 (273)
+.+|.|.-+. ....+.+...++.+. .+...|||.+++.-|+++|..... .|.+++++-.....
T Consensus 20 ~~hp~gc~~~--v~~qi~~~~~~~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~ 97 (405)
T 3zu3_A 20 TAHPTGCEAN--VKKQIDYVTTEGPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNS 97 (405)
T ss_dssp CCCHHHHHHH--HHHHHHHHHHHCCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHH
T ss_pred CCCCHHHHHH--HHHHHHHHHhcCCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhH
Confidence 3456665443 355566666666653 334557777778899999988888 89998876533211
Q ss_pred HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHhC
Q 024040 105 IERRIILRALGAEVYLADPAV-GFEGFVKKGEEILNRT 141 (273)
Q Consensus 105 ~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~~ 141 (273)
....+.++..|.++..+..+- +.++..+...+..++.
T Consensus 98 ~~~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~~~~ 135 (405)
T 3zu3_A 98 AAFHKFAAQKGLYAKSINGDAFSDEIKQLTIDAIKQDL 135 (405)
T ss_dssp HHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 112335667888776654432 2333444444444444
No 147
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=62.60 E-value=45 Score=27.00 Aligned_cols=55 Identities=20% Similarity=0.057 Sum_probs=37.4
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS-IERRIILRALGAEVYLADP 123 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~-~~~~~~~~~~Ga~v~~~~~ 123 (273)
...+||..+|.-|.++|....+.|.+++++...... ......++..|.++..+..
T Consensus 10 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 65 (260)
T 2ae2_A 10 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVC 65 (260)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEc
Confidence 455888888999999999988899998776543211 1123445556877766543
No 148
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=62.33 E-value=37 Score=28.01 Aligned_cols=55 Identities=18% Similarity=0.234 Sum_probs=37.9
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS--IERRIILRALGAEVYLADP 123 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~--~~~~~~~~~~Ga~v~~~~~ 123 (273)
...+|+..+|--|.++|....+.|.+++++...... ....+.++..|.++..+..
T Consensus 30 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (283)
T 1g0o_A 30 KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKA 86 (283)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEc
Confidence 355888888889999999988899998776654211 1223456667877766543
No 149
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=62.31 E-value=58 Score=25.95 Aligned_cols=55 Identities=27% Similarity=0.232 Sum_probs=38.8
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC-CCCH-HHHHHHHHcCCEEEEeCC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPS-TYSI-ERRIILRALGAEVYLADP 123 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~-~~~~-~~~~~~~~~Ga~v~~~~~ 123 (273)
.+.+|+..+|--|.++|..-.+.|.+++++... .... .....++..|.++..+..
T Consensus 8 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 64 (258)
T 3afn_B 8 KRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAA 64 (258)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEEC
Confidence 355788888889999999988899998877654 2222 234456666878776654
No 150
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=61.73 E-value=41 Score=27.33 Aligned_cols=56 Identities=14% Similarity=0.086 Sum_probs=37.8
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS-IERRIILRALGAEVYLADPA 124 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~-~~~~~~~~~~Ga~v~~~~~~ 124 (273)
...+|+..+|--|.++|....+.|.+++++...... ....+.++..|.++..+..+
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D 86 (262)
T 3rkr_A 30 QVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACD 86 (262)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEec
Confidence 455777788889999999888899997776543211 12234556678888766543
No 151
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=61.71 E-value=64 Score=26.95 Aligned_cols=64 Identities=20% Similarity=0.190 Sum_probs=41.0
Q ss_pred HHHHHHHHHH-cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 024040 52 AYSMIKDAED-KGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVY 119 (273)
Q Consensus 52 a~~~~~~a~~-~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~ 119 (273)
+.+.+..+++ .+...+|.+ +.....|+.|.++|..++.+|.+++++-+. ..+.+.++.+|++++
T Consensus 138 ae~a~~~~l~~~~~~l~g~~-v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~---~~~~~~~~~~g~~~~ 202 (293)
T 3d4o_A 138 AEGTIMMAIQHTDFTIHGAN-VAVLGLGRVGMSVARKFAALGAKVKVGARE---SDLLARIAEMGMEPF 202 (293)
T ss_dssp HHHHHHHHHHHCSSCSTTCE-EEEECCSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHhcCCCCCCCE-EEEEeeCHHHHHHHHHHHhCCCEEEEEECC---HHHHHHHHHCCCeec
Confidence 3334443433 233334444 777788999999999999999987766543 344555566788753
No 152
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=61.60 E-value=38 Score=27.21 Aligned_cols=55 Identities=18% Similarity=0.122 Sum_probs=37.4
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS-IERRIILRALGAEVYLADP 123 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~-~~~~~~~~~~Ga~v~~~~~ 123 (273)
.+.+|+..+|.-|.++|......|.+++++...... ....+.++..|.++..+..
T Consensus 14 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~ 69 (260)
T 3awd_A 14 RVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVM 69 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEe
Confidence 455888888999999999998999987777653211 1223445566776665543
No 153
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=60.84 E-value=68 Score=26.23 Aligned_cols=43 Identities=12% Similarity=0.051 Sum_probs=30.0
Q ss_pred HHHHHhhCCCcCEEEEecCCCccHHHHHHHHHhhC----CCcEEEEEecC
Q 024040 165 PEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKN----PNIKVYGIEPS 210 (273)
Q Consensus 165 ~Ei~~q~~~~~d~iv~p~G~Gg~~~Gi~~~~k~~~----~~~~vigVe~~ 210 (273)
.+++++ .+.||+||+. +..++.|+..++++.+ .++.|+|.+-.
T Consensus 179 ~~~l~~-~~~~~ai~~~--nd~~A~g~~~al~~~G~~vP~di~vig~D~~ 225 (294)
T 3qk7_A 179 SRLLAL-EVPPTAIITD--CNMLGDGVASALDKAGLLGGEGISLIAYDGL 225 (294)
T ss_dssp HHHHHS-SSCCSEEEES--SHHHHHHHHHHHHHTTCSSTTSCEEEEETCS
T ss_pred HHHHcC-CCCCcEEEEC--CHHHHHHHHHHHHHcCCCCCCceEEEeecCc
Confidence 344433 2578999875 5577789999999876 35788888643
No 154
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=60.69 E-value=36 Score=27.57 Aligned_cols=54 Identities=11% Similarity=0.165 Sum_probs=36.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC---HHHHHHHHHcCCEEEEeCC
Q 024040 70 TVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS---IERRIILRALGAEVYLADP 123 (273)
Q Consensus 70 ~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~---~~~~~~~~~~Ga~v~~~~~ 123 (273)
..+|+..+|.-|.++|....+.|.+++++...... ....+.++..|.++..+..
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 60 (258)
T 3a28_C 4 VAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGL 60 (258)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEEC
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEc
Confidence 45888888889999999988889997776543221 1223345555777766543
No 155
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=60.64 E-value=32 Score=28.72 Aligned_cols=53 Identities=15% Similarity=0.085 Sum_probs=38.7
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeC
Q 024040 70 TVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTY-SIERRIILRALGAEVYLAD 122 (273)
Q Consensus 70 ~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~-~~~~~~~~~~~Ga~v~~~~ 122 (273)
+.+|+..+|+-|.+++......|.+++++..... ....+..+...|++++..+
T Consensus 13 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~D 66 (318)
T 2r6j_A 13 KILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGE 66 (318)
T ss_dssp CEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECC
T ss_pred eEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEec
Confidence 3478888999999999998888999988886543 3333444555677776655
No 156
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=60.52 E-value=29 Score=29.81 Aligned_cols=56 Identities=13% Similarity=0.170 Sum_probs=39.1
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcC-CeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 024040 61 DKGLITPGKTVLIELTSGNTGIGLAFIAASRG-YKLIIIMPSTYSIERRIILRALGAEVYLA 121 (273)
Q Consensus 61 ~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g-~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~ 121 (273)
+...+++|++-+|...+|..|.+.+..|+.+| .+++... +..|.+.++ +|++.+.-
T Consensus 136 ~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~----~~~~~~~~~-~ga~~~~~ 192 (349)
T 4a27_A 136 EVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA----STFKHEAIK-DSVTHLFD 192 (349)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE----CGGGHHHHG-GGSSEEEE
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC----CHHHHHHHH-cCCcEEEc
Confidence 55678888885555556999999999999885 5554443 235667777 89876554
No 157
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=60.40 E-value=4.9 Score=30.30 Aligned_cols=46 Identities=15% Similarity=0.174 Sum_probs=32.7
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-HcCCEEEE
Q 024040 72 LIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILR-ALGAEVYL 120 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~-~~Ga~v~~ 120 (273)
|+....|..|..+|...+..|.+++++-+. +.+.+.++ .+|..++.
T Consensus 22 v~IiG~G~iG~~la~~L~~~g~~V~vid~~---~~~~~~~~~~~g~~~~~ 68 (155)
T 2g1u_A 22 IVIFGCGRLGSLIANLASSSGHSVVVVDKN---EYAFHRLNSEFSGFTVV 68 (155)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEEESC---GGGGGGSCTTCCSEEEE
T ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEECC---HHHHHHHHhcCCCcEEE
Confidence 777788999999999999999988777543 23444444 45665443
No 158
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=60.39 E-value=41 Score=27.08 Aligned_cols=55 Identities=25% Similarity=0.142 Sum_probs=36.6
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS-IERRIILRALGAEVYLADP 123 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~-~~~~~~~~~~Ga~v~~~~~ 123 (273)
...+||..+|.-|.++|..-.+.|.+++++...... ....+.++..|.++..+..
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~ 63 (247)
T 2jah_A 8 KVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLEL 63 (247)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEC
Confidence 455888888999999999988899988776543111 1123344556777665543
No 159
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=60.39 E-value=28 Score=28.86 Aligned_cols=73 Identities=16% Similarity=0.002 Sum_probs=46.2
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHhC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTY-SIERRIILRALGAEVYLADPAV-GFEGFVKKGEEILNRT 141 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~-~~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~~ 141 (273)
+..|||..++--|+++|..-.+.|.++++.-.... -....+.++..|.+++.+..+- +.++..+...+..++.
T Consensus 10 KvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (255)
T 4g81_D 10 KTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEG 84 (255)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 45688888888999999999999998766432210 1123556777898888776542 2334444444444443
No 160
>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*
Probab=60.23 E-value=94 Score=27.71 Aligned_cols=100 Identities=15% Similarity=-0.012 Sum_probs=52.4
Q ss_pred CCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHH--HHHHHHHcCCeEEEEecCCCC-------------
Q 024040 40 MMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIG--LAFIAASRGYKLIIIMPSTYS------------- 104 (273)
Q Consensus 40 ~~~ptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a--~A~~a~~~g~~~~i~~p~~~~------------- 104 (273)
...|.|..+.. ...+.+..+++.+..+...+||..++--|.+ +|.+....|.+++++-.....
T Consensus 34 ~~~p~g~~~~v--~~qi~y~~~~~~~~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~ 111 (418)
T 4eue_A 34 DVHPYGCRREV--LNQIDYCKKAIGFRGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNN 111 (418)
T ss_dssp CCCHHHHHHHH--HHHHHHHHHSCCCCCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHH
T ss_pred cCCCccHHHHH--HHHHHHHhccCcCCCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchH
Confidence 34455554422 2334444456555555666777766667777 444444448888776543221
Q ss_pred HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHhC
Q 024040 105 IERRIILRALGAEVYLADPAV-GFEGFVKKGEEILNRT 141 (273)
Q Consensus 105 ~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~~ 141 (273)
....+.++..|.++..+..+. +.++..+...+..++.
T Consensus 112 ~~~~~~~~~~g~~~~~~~~Dvtd~~~v~~~v~~i~~~~ 149 (418)
T 4eue_A 112 IFFKEFAKKKGLVAKNFIEDAFSNETKDKVIKYIKDEF 149 (418)
T ss_dssp HHHHHHHHHTTCCEEEEESCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence 223345567888776654332 2334444444554443
No 161
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=60.20 E-value=48 Score=26.93 Aligned_cols=72 Identities=10% Similarity=0.111 Sum_probs=45.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHHh
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS--IERRIILRALGAEVYLADPA-VGFEGFVKKGEEILNR 140 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~--~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 140 (273)
...+||..+|--|.++|..-...|.+++++...... ......++..|.++..+..+ .+.++..+...+..++
T Consensus 9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (259)
T 3edm_A 9 RTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADK 83 (259)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 455888888889999999988899998877554332 22345566677766655433 2333444444444444
No 162
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=59.96 E-value=40 Score=28.24 Aligned_cols=71 Identities=17% Similarity=0.163 Sum_probs=43.4
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHH
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS-IERRIILRALGAEVYLADPAV-GFEGFVKKGEEILN 139 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~-~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~ 139 (273)
...+||..+|--|.++|....+.|.+++++...... ....+.++..|.++..+..+- +.++..+...+..+
T Consensus 32 k~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 104 (301)
T 3tjr_A 32 RAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFR 104 (301)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 455888888889999999999999997776543211 122344566677776654332 23333334444433
No 163
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=59.95 E-value=26 Score=30.79 Aligned_cols=59 Identities=25% Similarity=0.344 Sum_probs=41.2
Q ss_pred cCCCCCCCeEEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHH----HcCCEEEEeC
Q 024040 62 KGLITPGKTVLIELTS--GNTGIGLAFIAASRGYKLIIIMPSTY--SIERRIILR----ALGAEVYLAD 122 (273)
Q Consensus 62 ~g~~~~g~~~vv~~ss--GN~g~a~A~~a~~~g~~~~i~~p~~~--~~~~~~~~~----~~Ga~v~~~~ 122 (273)
.|.+. |.+ |+-... +|.+.|++.+++++|++++++.|+.- ++.-++.++ ..|+++..+.
T Consensus 171 ~g~l~-gl~-va~vGD~~~rva~Sl~~~~~~lG~~v~~~~P~~l~p~~~~~~~~~~~a~~~G~~v~~~~ 237 (359)
T 2w37_A 171 FGKLQ-GLT-LTFMGDGRNNVANSLLVTGAILGVNIHIVAPKALFPTEETQNIAKGFAEKSGAKLVITD 237 (359)
T ss_dssp HSCCT-TCE-EEEESCTTSHHHHHHHHHHHHHTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCCEEEES
T ss_pred hCCcC-CeE-EEEECCCccchHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 45433 334 555555 59999999999999999999999853 333333333 6798887775
No 164
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=59.91 E-value=47 Score=30.57 Aligned_cols=60 Identities=17% Similarity=0.051 Sum_probs=42.4
Q ss_pred CCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEe-cCCC---------------CHHHHHHHHHcCCEEEEeCCC
Q 024040 65 ITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIM-PSTY---------------SIERRIILRALGAEVYLADPA 124 (273)
Q Consensus 65 ~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~-p~~~---------------~~~~~~~~~~~Ga~v~~~~~~ 124 (273)
++++.+.+||..+|--|.++|..-...|.+.++++ ..+. .....+.++..|+++..+..+
T Consensus 248 ~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~D 323 (525)
T 3qp9_A 248 WQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCD 323 (525)
T ss_dssp SCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECC
T ss_pred ecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECC
Confidence 44556667888888888999888778899866666 4321 234466677889999877643
No 165
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=59.89 E-value=27 Score=27.79 Aligned_cols=52 Identities=21% Similarity=0.243 Sum_probs=40.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCC-EEEEeCC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGA-EVYLADP 123 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga-~v~~~~~ 123 (273)
.+.+|+..+|.-|.+++......|.+++++.... .+...+...+. +++..+-
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~---~~~~~~~~~~~~~~~~~Dl 74 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE---EQGPELRERGASDIVVANL 74 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG---GGHHHHHHTTCSEEEECCT
T ss_pred CeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh---HHHHHHHhCCCceEEEccc
Confidence 4558888899999999999999999999887643 34455556688 8777663
No 166
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=59.88 E-value=61 Score=26.53 Aligned_cols=72 Identities=17% Similarity=0.123 Sum_probs=46.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHHh
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS--IERRIILRALGAEVYLADPA-VGFEGFVKKGEEILNR 140 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~--~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 140 (273)
...+||..+|--|.++|....+.|.++++....... ....+.++..|.++..+..+ .+.++..+...+..++
T Consensus 28 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 102 (267)
T 3u5t_A 28 KVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEA 102 (267)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 355888888889999999988899998876544322 22344566778887766533 2333444444444443
No 167
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=59.77 E-value=16 Score=30.06 Aligned_cols=58 Identities=12% Similarity=0.102 Sum_probs=36.4
Q ss_pred CChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhC
Q 024040 77 SGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRT 141 (273)
Q Consensus 77 sGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~ 141 (273)
||-.|.++|.++.+.|.+++++..+...... ...|.+++.+. +.++..+.+.+.....
T Consensus 28 SG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~----~~~~~~~~~v~---s~~em~~~v~~~~~~~ 85 (232)
T 2gk4_A 28 TGHLGKIITETLLSAGYEVCLITTKRALKPE----PHPNLSIREIT---NTKDLLIEMQERVQDY 85 (232)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEECTTSCCCC----CCTTEEEEECC---SHHHHHHHHHHHGGGC
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCcccccc----CCCCeEEEEHh---HHHHHHHHHHHhcCCC
Confidence 8999999999999999999998764321100 01255555554 3445555555544443
No 168
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=59.67 E-value=38 Score=27.08 Aligned_cols=72 Identities=19% Similarity=0.106 Sum_probs=44.8
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS-IERRIILRALGAEVYLADPAV-GFEGFVKKGEEILNR 140 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~-~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 140 (273)
...+|+..+|.-|.++|....+.|.+++++...... ....+.++..|.++..+..+- +.++..+...+..++
T Consensus 6 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (247)
T 3lyl_A 6 KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAE 79 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 455788888889999999988899998777654211 122445566787776654332 333444444444443
No 169
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=59.59 E-value=46 Score=27.64 Aligned_cols=72 Identities=17% Similarity=0.146 Sum_probs=45.4
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTY--SIERRIILRALGAEVYLADPAV-GFEGFVKKGEEILNR 140 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~--~~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 140 (273)
...+||..+|--|.++|....+.|.+++++..... .....+.++..|.+++.+..+- +.++..+...+..++
T Consensus 48 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 48 KNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 45588888888999999998999999877765432 1123344566788887665432 233334444444433
No 170
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=59.43 E-value=29 Score=29.06 Aligned_cols=73 Identities=16% Similarity=-0.002 Sum_probs=40.8
Q ss_pred CeEEEeeCCCh--HHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHHhC
Q 024040 69 KTVLIELTSGN--TGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPA-VGFEGFVKKGEEILNRT 141 (273)
Q Consensus 69 ~~~vv~~ssGN--~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 141 (273)
...+||..+|. -|.++|....+.|.+++++..........+.+...+.++..+..+ .+.++..+...+..++.
T Consensus 32 k~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (293)
T 3grk_A 32 KRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKW 107 (293)
T ss_dssp CEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence 45578887777 899999998899999777654421122333333222234443322 23344444445554443
No 171
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=59.32 E-value=43 Score=27.39 Aligned_cols=72 Identities=19% Similarity=0.098 Sum_probs=43.4
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS-IERRIILRALGAEVYLADPAV-GFEGFVKKGEEILNR 140 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~-~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 140 (273)
.+.+|+..+|--|.++|....+.|.+++++...... ....+.++..|.++..+..+- +.++..+...+..++
T Consensus 32 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 105 (272)
T 1yb1_A 32 EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE 105 (272)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 455888888999999999988999997776653211 112334555677776554332 233333334444443
No 172
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=59.18 E-value=82 Score=26.66 Aligned_cols=104 Identities=17% Similarity=0.181 Sum_probs=66.2
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCCC
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQF 150 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 150 (273)
+|.....|+.|.++|..++.+|++++++-+.. .. .....+|++. + +.+ ++.++. +...+.-.
T Consensus 144 ~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~-~~---~~~~~~g~~~--~----~l~-------ell~~a-DvV~l~~p 205 (307)
T 1wwk_A 144 TIGIIGFGRIGYQVAKIANALGMNILLYDPYP-NE---ERAKEVNGKF--V----DLE-------TLLKES-DVVTIHVP 205 (307)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC-CH---HHHHHTTCEE--C----CHH-------HHHHHC-SEEEECCC
T ss_pred eEEEEccCHHHHHHHHHHHHCCCEEEEECCCC-Ch---hhHhhcCccc--c----CHH-------HHHhhC-CEEEEecC
Confidence 47777899999999999999999987775543 22 2345678753 1 122 233343 45554332
Q ss_pred CCCcchHhhhhchHHHHHHhhCCCcCEEEEecCCCccHH--HHHHHHHhh
Q 024040 151 ENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTGGTVT--GAGRFLKEK 198 (273)
Q Consensus 151 ~~~~~~~~g~~t~~~Ei~~q~~~~~d~iv~p~G~Gg~~~--Gi~~~~k~~ 198 (273)
.++.. ...+..+.+.++ +++.+++-+|.|+..- .+..+++..
T Consensus 206 ~~~~t----~~li~~~~l~~m--k~ga~lin~arg~~vd~~aL~~aL~~g 249 (307)
T 1wwk_A 206 LVEST----YHLINEERLKLM--KKTAILINTSRGPVVDTNALVKALKEG 249 (307)
T ss_dssp CSTTT----TTCBCHHHHHHS--CTTCEEEECSCGGGBCHHHHHHHHHHT
T ss_pred CChHH----hhhcCHHHHhcC--CCCeEEEECCCCcccCHHHHHHHHHhC
Confidence 23321 123445677777 4688999999998754 666676653
No 173
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=59.09 E-value=45 Score=27.36 Aligned_cols=72 Identities=18% Similarity=0.159 Sum_probs=43.9
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS-IERRIILRALGAEVYLADPAV-GFEGFVKKGEEILNR 140 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~-~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 140 (273)
...+||..+|--|.++|....+.|.+++++-..... ......++..|.++..+..+- +.++..+...+..++
T Consensus 5 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 78 (264)
T 3tfo_A 5 KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDT 78 (264)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 355788888889999999988899997776543111 122345566788887665332 233333344444333
No 174
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=59.08 E-value=65 Score=26.24 Aligned_cols=69 Identities=22% Similarity=0.197 Sum_probs=45.7
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhC
Q 024040 70 TVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRT 141 (273)
Q Consensus 70 ~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~ 141 (273)
..+||..+|--|.++|..-.+.|.+++++-.... ...+.++..++..+.++-. +.++..+...+..++.
T Consensus 29 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~~ 97 (260)
T 3gem_A 29 PILITGASQRVGLHCALRLLEHGHRVIISYRTEH--ASVTELRQAGAVALYGDFS-CETGIMAFIDLLKTQT 97 (260)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCC--HHHHHHHHHTCEEEECCTT-SHHHHHHHHHHHHHHC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChH--HHHHHHHhcCCeEEECCCC-CHHHHHHHHHHHHHhc
Confidence 4488888888999999998889999887765432 2245556678777777643 3344444445554443
No 175
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=59.06 E-value=34 Score=29.81 Aligned_cols=60 Identities=18% Similarity=0.210 Sum_probs=40.2
Q ss_pred cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHH----HHcCCEEEEeC
Q 024040 62 KGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTY--SIERRIIL----RALGAEVYLAD 122 (273)
Q Consensus 62 ~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~--~~~~~~~~----~~~Ga~v~~~~ 122 (273)
.|.+. |.+..+..-.+|.+.+++.+++++|++++++.|+.- ++.-++.+ +..|+++..+.
T Consensus 174 ~G~l~-glkva~vGD~~nva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~~~ 239 (340)
T 4ep1_A 174 TNTFK-GIKLAYVGDGNNVCHSLLLASAKVGMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEILH 239 (340)
T ss_dssp HSCCT-TCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEEEES
T ss_pred hCCCC-CCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 45433 344233333488999999999999999999999853 33333333 36788887765
No 176
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=58.87 E-value=37 Score=31.16 Aligned_cols=97 Identities=16% Similarity=0.122 Sum_probs=62.5
Q ss_pred CCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCC
Q 024040 63 GLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTP 142 (273)
Q Consensus 63 g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~ 142 (273)
+...+|.+ |+....|+-|..+|..++.+|.+++++-+ ++.+....+.+|+++ + ++++ ..+..
T Consensus 269 ~~~l~Gkt-V~IiG~G~IG~~~A~~lka~Ga~Viv~d~---~~~~~~~A~~~Ga~~--~----~l~e-------~l~~a- 330 (494)
T 3ce6_A 269 DALIGGKK-VLICGYGDVGKGCAEAMKGQGARVSVTEI---DPINALQAMMEGFDV--V----TVEE-------AIGDA- 330 (494)
T ss_dssp CCCCTTCE-EEEECCSHHHHHHHHHHHHTTCEEEEECS---CHHHHHHHHHTTCEE--C----CHHH-------HGGGC-
T ss_pred CCCCCcCE-EEEEccCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCEE--e----cHHH-------HHhCC-
Confidence 33556666 77788899999999999999997665533 456666677889974 2 1322 22333
Q ss_pred CeEeeCCCCCCcchHhhhhchHHHHHHhhCCCcCEEEEecCCCcc
Q 024040 143 NGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTGGT 187 (273)
Q Consensus 143 ~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~~~d~iv~p~G~Gg~ 187 (273)
+.++.... ++. .+..+.++.+ ++..+++-+|.+..
T Consensus 331 DvVi~atg-t~~-------~i~~~~l~~m--k~ggilvnvG~~~~ 365 (494)
T 3ce6_A 331 DIVVTATG-NKD-------IIMLEHIKAM--KDHAILGNIGHFDN 365 (494)
T ss_dssp SEEEECSS-SSC-------SBCHHHHHHS--CTTCEEEECSSSGG
T ss_pred CEEEECCC-CHH-------HHHHHHHHhc--CCCcEEEEeCCCCC
Confidence 45554321 222 2234566666 46788899998875
No 177
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=58.80 E-value=71 Score=25.85 Aligned_cols=44 Identities=18% Similarity=0.151 Sum_probs=31.7
Q ss_pred HHHHHHhhCCCcCEEEEecCCCccHHHHHHHHHhhCC-CcEEEEEecC
Q 024040 164 GPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNP-NIKVYGIEPS 210 (273)
Q Consensus 164 ~~Ei~~q~~~~~d~iv~p~G~Gg~~~Gi~~~~k~~~~-~~~vigVe~~ 210 (273)
..+++++- +++|+||+. +..++.|+..++++.+. ++.|+|.+..
T Consensus 186 ~~~~l~~~-~~~~ai~~~--~d~~a~g~~~al~~~g~~di~vig~d~~ 230 (293)
T 3l6u_A 186 MRQVIDSG-IPFDAVYCH--NDDIAMGVLEALKKAKISGKIVVGIDGN 230 (293)
T ss_dssp HHHHHHTT-CCCSEEEES--SHHHHHHHHHHHHHTTCCCCEEEEEECC
T ss_pred HHHHHHhC-CCCCEEEEC--CchHHHHHHHHHHhCCCCCeEEEEecCC
Confidence 34444443 578999875 55667799999998775 7888888744
No 178
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=58.67 E-value=17 Score=32.29 Aligned_cols=48 Identities=21% Similarity=0.071 Sum_probs=37.6
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLA 121 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~ 121 (273)
+|+....|..|..+|..++.+|.+++++=+ ...+++.++.+|++.+.+
T Consensus 186 kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~---~~~~l~~~~~lGa~~~~l 233 (381)
T 3p2y_A 186 SALVLGVGVAGLQALATAKRLGAKTTGYDV---RPEVAEQVRSVGAQWLDL 233 (381)
T ss_dssp EEEEESCSHHHHHHHHHHHHHTCEEEEECS---SGGGHHHHHHTTCEECCC
T ss_pred EEEEECchHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCeEEec
Confidence 388888899999999999999998665533 345677778899987543
No 179
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=58.56 E-value=69 Score=25.64 Aligned_cols=53 Identities=17% Similarity=0.214 Sum_probs=34.9
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCe-EEEEecCCCCHHHHHHHHHc--CCEEEEeC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYK-LIIIMPSTYSIERRIILRAL--GAEVYLAD 122 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~-~~i~~p~~~~~~~~~~~~~~--Ga~v~~~~ 122 (273)
.+.+|+..+|--|.++|....+.|.+ ++++... ......+.++.. |.++..+.
T Consensus 6 k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~-~~~~~~~~l~~~~~~~~~~~~~ 61 (254)
T 1sby_A 6 KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRV-ENPTALAELKAINPKVNITFHT 61 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESS-CCHHHHHHHHHHCTTSEEEEEE
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCcEEEEEecC-chHHHHHHHHHhCCCceEEEEE
Confidence 45578888888999999998889997 5555443 333444555443 55665554
No 180
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=58.47 E-value=48 Score=27.08 Aligned_cols=72 Identities=24% Similarity=0.170 Sum_probs=45.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS--IERRIILRALGAEVYLADPAV-GFEGFVKKGEEILNR 140 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~--~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 140 (273)
.+.+||..+|.-|.++|....+.|.+++++...... ....+.++..|.++..+..+. +.++..+...++.++
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 104 (271)
T 4iin_A 30 KNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQS 104 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence 455777788889999999988999998887664322 223445666787776665432 233444444444433
No 181
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=58.21 E-value=54 Score=26.75 Aligned_cols=72 Identities=15% Similarity=0.199 Sum_probs=45.3
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS--IERRIILRALGAEVYLADPAV-GFEGFVKKGEEILNR 140 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~--~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 140 (273)
...+||..+|--|.++|..-.+.|.++++....... ....+.++..|.++..+..+- +.++..+...+..++
T Consensus 19 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 93 (270)
T 3is3_A 19 KVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAH 93 (270)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 455788888888999999988899998886544221 223455667788877665432 233344444444443
No 182
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=57.96 E-value=61 Score=27.30 Aligned_cols=72 Identities=14% Similarity=0.153 Sum_probs=45.7
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC-----------CCCHHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHH
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPS-----------TYSIERRIILRALGAEVYLADPAV-GFEGFVKKGEE 136 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~-----------~~~~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~ 136 (273)
...+||..+|--|.++|..-.+.|.+++++-.. .........++..|.++..+..+- +.++..+...+
T Consensus 28 k~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 107 (322)
T 3qlj_A 28 RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQT 107 (322)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence 345777777888899998888899988877432 111234556777898888776542 23344444444
Q ss_pred HHHh
Q 024040 137 ILNR 140 (273)
Q Consensus 137 ~~~~ 140 (273)
..++
T Consensus 108 ~~~~ 111 (322)
T 3qlj_A 108 AVET 111 (322)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 183
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Probab=57.71 E-value=56 Score=29.68 Aligned_cols=60 Identities=32% Similarity=0.277 Sum_probs=41.3
Q ss_pred CCCCCeEEEeeCCChHHHHHHHHHHHcCCe-EEEEecCCC--C--HHHHHHHHHcCCEEEEeCCC
Q 024040 65 ITPGKTVLIELTSGNTGIGLAFIAASRGYK-LIIIMPSTY--S--IERRIILRALGAEVYLADPA 124 (273)
Q Consensus 65 ~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~-~~i~~p~~~--~--~~~~~~~~~~Ga~v~~~~~~ 124 (273)
++++.+.+|+..+|.-|.++|......|.+ ++++..... + ....+.++..|+++..+..+
T Consensus 223 ~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~D 287 (486)
T 2fr1_A 223 WKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACD 287 (486)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeC
Confidence 445567788888899999999988888987 554443321 1 23345677889998776543
No 184
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=57.67 E-value=51 Score=26.83 Aligned_cols=73 Identities=15% Similarity=0.091 Sum_probs=45.6
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHHhC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTY-SIERRIILRALGAEVYLADPA-VGFEGFVKKGEEILNRT 141 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~-~~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 141 (273)
...+||..+|--|.++|..-.+.|.+++++-.... .....+.++..|.++..+..+ .+.++..+...+..++.
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (264)
T 3ucx_A 12 KVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAY 86 (264)
T ss_dssp CEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45688888888999999999999999777654311 112234556678777766533 23334444445554443
No 185
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=57.60 E-value=47 Score=27.30 Aligned_cols=72 Identities=14% Similarity=0.132 Sum_probs=43.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS-IERRIILRALGAEVYLADPAV-GFEGFVKKGEEILNR 140 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~-~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 140 (273)
...+|+..+|.-|.++|....+.|.+++++...... ....+.++..|.++..+..+- +.++..+...+..++
T Consensus 23 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 96 (277)
T 2rhc_B 23 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVER 96 (277)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 355888888999999999999999998776543211 112344555677766554322 233333334444443
No 186
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=57.54 E-value=67 Score=29.10 Aligned_cols=51 Identities=12% Similarity=-0.119 Sum_probs=37.1
Q ss_pred hHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 024040 49 DRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIM 99 (273)
Q Consensus 49 ~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~ 99 (273)
-+|..+.+..+.+........++|+.-..||-|..+|.....+|-+++.+.
T Consensus 215 g~Gv~~~~~~~~~~~~~~l~Gk~vaVQG~GnVG~~aa~~L~e~GakvVavs 265 (450)
T 4fcc_A 215 GYGLVYFTEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITAS 265 (450)
T ss_dssp HHHHHHHHHHHHHHTTCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred eeeHHHHHHHHHHHcCCCcCCCEEEEeCCChHHHHHHHHHHhcCCeEEEEe
Confidence 357777777766432222223458888999999999999999999987654
No 187
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=57.54 E-value=43 Score=22.92 Aligned_cols=48 Identities=15% Similarity=0.278 Sum_probs=34.1
Q ss_pred EEeeCCChHHHHHHHHHHHcC-CeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 024040 72 LIELTSGNTGIGLAFIAASRG-YKLIIIMPSTYSIERRIILRALGAEVYLAD 122 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~~g-~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~ 122 (273)
++....|..|.+++......| .+++++-+ ++.+.+.+...|.+++..+
T Consensus 8 v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r---~~~~~~~~~~~~~~~~~~d 56 (118)
T 3ic5_A 8 ICVVGAGKIGQMIAALLKTSSNYSVTVADH---DLAALAVLNRMGVATKQVD 56 (118)
T ss_dssp EEEECCSHHHHHHHHHHHHCSSEEEEEEES---CHHHHHHHHTTTCEEEECC
T ss_pred EEEECCCHHHHHHHHHHHhCCCceEEEEeC---CHHHHHHHHhCCCcEEEec
Confidence 444455999999999999999 67666544 4566666666777766554
No 188
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=57.53 E-value=36 Score=27.97 Aligned_cols=71 Identities=18% Similarity=0.108 Sum_probs=44.5
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC---------CHH----HHHHHHHcCCEEEEeCCCC-ChhHHHHHH
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTY---------SIE----RRIILRALGAEVYLADPAV-GFEGFVKKG 134 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~---------~~~----~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a 134 (273)
...+||..+|--|.++|....+.|.+++++-.... ... ....++..|.+++.+..+- +.++..+..
T Consensus 11 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 90 (281)
T 3s55_A 11 KTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESFV 90 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence 45588888888999999999999999877765311 122 2344566788887665432 233344444
Q ss_pred HHHHH
Q 024040 135 EEILN 139 (273)
Q Consensus 135 ~~~~~ 139 (273)
.+..+
T Consensus 91 ~~~~~ 95 (281)
T 3s55_A 91 AEAED 95 (281)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44433
No 189
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=57.32 E-value=66 Score=27.92 Aligned_cols=103 Identities=16% Similarity=0.128 Sum_probs=64.8
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCCC
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQF 150 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 150 (273)
+|....-|+-|.++|..++.+|++++.+-+...+.... .|++. ++ +. .++.++. +...++--
T Consensus 175 tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~-----~g~~~--~~---~l-------~ell~~s-DvV~l~~P 236 (345)
T 4g2n_A 175 RLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALE-----EGAIY--HD---TL-------DSLLGAS-DIFLIAAP 236 (345)
T ss_dssp EEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHH-----TTCEE--CS---SH-------HHHHHTC-SEEEECSC
T ss_pred EEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhh-----cCCeE--eC---CH-------HHHHhhC-CEEEEecC
Confidence 47778899999999999999999988876654333221 15543 21 12 2333443 55554332
Q ss_pred CCCcchHhhhhchHHHHHHhhCCCcCEEEEecCCCccHH--HHHHHHHh
Q 024040 151 ENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTGGTVT--GAGRFLKE 197 (273)
Q Consensus 151 ~~~~~~~~g~~t~~~Ei~~q~~~~~d~iv~p~G~Gg~~~--Gi~~~~k~ 197 (273)
.++. -+..+..+.+.++ ++..+++-++.|+..- .+..+++.
T Consensus 237 lt~~----T~~li~~~~l~~m--k~gailIN~aRG~~vde~aL~~aL~~ 279 (345)
T 4g2n_A 237 GRPE----LKGFLDHDRIAKI--PEGAVVINISRGDLINDDALIEALRS 279 (345)
T ss_dssp CCGG----GTTCBCHHHHHHS--CTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred CCHH----HHHHhCHHHHhhC--CCCcEEEECCCCchhCHHHHHHHHHh
Confidence 2222 2344567788888 5789999999998764 34444443
No 190
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=57.18 E-value=64 Score=26.26 Aligned_cols=71 Identities=14% Similarity=0.106 Sum_probs=44.6
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHH
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS--IERRIILRALGAEVYLADPAV-GFEGFVKKGEEILN 139 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~--~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~ 139 (273)
...+||..+|.-|.++|....+.|.++++....... ....+.++..|.++..+..+- +.++..+...+..+
T Consensus 27 k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 100 (272)
T 4e3z_A 27 PVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDR 100 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 345778888889999999999999998776443221 123445666788887765432 23333444444433
No 191
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=57.06 E-value=27 Score=30.12 Aligned_cols=58 Identities=21% Similarity=0.235 Sum_probs=39.6
Q ss_pred HHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 024040 59 AEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVY 119 (273)
Q Consensus 59 a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~ 119 (273)
+.+...+++|++.+| ..+|..|.+.+..|+.+|.+.++.+. .++.|++.++.++..++
T Consensus 171 ~l~~~~~~~g~~VlV-~GaG~vG~~aiqlak~~Ga~~Vi~~~--~~~~~~~~a~~l~~~~~ 228 (363)
T 3m6i_A 171 GLQRAGVRLGDPVLI-CGAGPIGLITMLCAKAAGACPLVITD--IDEGRLKFAKEICPEVV 228 (363)
T ss_dssp HHHHHTCCTTCCEEE-ECCSHHHHHHHHHHHHTTCCSEEEEE--SCHHHHHHHHHHCTTCE
T ss_pred HHHHcCCCCCCEEEE-ECCCHHHHHHHHHHHHcCCCEEEEEC--CCHHHHHHHHHhchhcc
Confidence 445556788887455 45699999999999999998444332 25677777777743443
No 192
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=56.98 E-value=41 Score=27.28 Aligned_cols=72 Identities=11% Similarity=0.050 Sum_probs=43.9
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTY-SIERRIILRALGAEVYLADPAV-GFEGFVKKGEEILNR 140 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~-~~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 140 (273)
...+||..+|--|.++|..-.+.|.+++++-.... .......++..|.++..+..+- +.++..+...+..++
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 86 (256)
T 3gaf_A 13 AVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQ 86 (256)
T ss_dssp CEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 45578888888999999988888999777654321 1122445666788887665432 233333334444333
No 193
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=56.80 E-value=23 Score=31.70 Aligned_cols=48 Identities=15% Similarity=0.119 Sum_probs=37.3
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLA 121 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~ 121 (273)
+|+....|..|..+|..++.+|.+++++=+ ...+++.++.+|++.+.+
T Consensus 192 kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~---~~~~l~~~~~~G~~~~~~ 239 (405)
T 4dio_A 192 KIFVMGAGVAGLQAIATARRLGAVVSATDV---RPAAKEQVASLGAKFIAV 239 (405)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECS---STTHHHHHHHTTCEECCC
T ss_pred EEEEECCcHHHHHHHHHHHHCCCEEEEEcC---CHHHHHHHHHcCCceeec
Confidence 388888999999999999999998665432 335677778899986544
No 194
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=56.64 E-value=24 Score=29.21 Aligned_cols=53 Identities=17% Similarity=0.229 Sum_probs=37.6
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-C--CH-HHHH---HHHHcCCEEEEeC
Q 024040 70 TVLIELTSGNTGIGLAFIAASRGYKLIIIMPST-Y--SI-ERRI---ILRALGAEVYLAD 122 (273)
Q Consensus 70 ~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~-~--~~-~~~~---~~~~~Ga~v~~~~ 122 (273)
+.+|+..+|.-|.+++......|.+++++.... . .+ .+.+ .+...|++++..+
T Consensus 4 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D 63 (307)
T 2gas_A 4 KILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGD 63 (307)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECC
T ss_pred EEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeC
Confidence 347888899999999999888899988887653 1 12 3333 3345688877665
No 195
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=56.44 E-value=54 Score=26.62 Aligned_cols=71 Identities=21% Similarity=0.251 Sum_probs=43.6
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHH
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS--IERRIILRALGAEVYLADPAV-GFEGFVKKGEEILN 139 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~--~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~ 139 (273)
...+||..+|--|.++|..-.+.|.++++....+.. ....+.++..|.++..+..+- +.++..+...+..+
T Consensus 5 k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 78 (258)
T 3oid_A 5 KCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDE 78 (258)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 455788888889999999988899998886443221 122345566787777665432 23333333444433
No 196
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=56.38 E-value=66 Score=26.16 Aligned_cols=72 Identities=19% Similarity=0.077 Sum_probs=45.3
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHH----HHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIER----RIILRALGAEVYLADPAV-GFEGFVKKGEEILNR 140 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~----~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 140 (273)
...+||..++--|.++|....+.|.+++++........+ ...++..|.++..+..+- +.++..+...+..++
T Consensus 12 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 88 (262)
T 3ksu_A 12 KVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKE 88 (262)
T ss_dssp CEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 455778777888889988888889998877543323232 344556688887765432 334444444444444
No 197
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=56.29 E-value=66 Score=26.35 Aligned_cols=72 Identities=14% Similarity=0.062 Sum_probs=45.2
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS--IERRIILRALGAEVYLADPAV-GFEGFVKKGEEILNR 140 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~--~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 140 (273)
...+||..+|--|.++|....+.|.++++....... ......++..|.++..+..+. +.++..+...+..++
T Consensus 32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (271)
T 3v2g_A 32 KTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEA 106 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 455888888889999999988999998776543211 223455667788877665432 333334444444443
No 198
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=56.19 E-value=50 Score=28.95 Aligned_cols=64 Identities=20% Similarity=0.192 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHc--CC-CCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHH-HHHcCCEE
Q 024040 51 IAYSMIKDAEDK--GL-ITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRII-LRALGAEV 118 (273)
Q Consensus 51 ~a~~~~~~a~~~--g~-~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~-~~~~Ga~v 118 (273)
+..+.+..+.+. |. ...|.+ |+....||.|..+|.....+|.+++ +.. .+..+++. .+.+|++.
T Consensus 153 GV~~~~~~~~~~~~G~~~L~Gkt-V~V~G~G~VG~~~A~~L~~~GakVv-v~D--~~~~~l~~~a~~~ga~~ 220 (364)
T 1leh_A 153 GVYRGMKAAAKEAFGSDSLEGLA-VSVQGLGNVAKALCKKLNTEGAKLV-VTD--VNKAAVSAAVAEEGADA 220 (364)
T ss_dssp HHHHHHHHHHHHHHSSCCCTTCE-EEEECCSHHHHHHHHHHHHTTCEEE-EEC--SCHHHHHHHHHHHCCEE
T ss_pred HHHHHHHHHHHhhccccCCCcCE-EEEECchHHHHHHHHHHHHCCCEEE-EEc--CCHHHHHHHHHHcCCEE
Confidence 455555554432 42 234444 8888899999999999999999866 443 23444443 33356654
No 199
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=55.94 E-value=30 Score=30.42 Aligned_cols=44 Identities=14% Similarity=0.183 Sum_probs=33.8
Q ss_pred hHHHHHHHHHHHcCCeEEEEecC-CC--CHHHHHHHH----HcCCEEEEeC
Q 024040 79 NTGIGLAFIAASRGYKLIIIMPS-TY--SIERRIILR----ALGAEVYLAD 122 (273)
Q Consensus 79 N~g~a~A~~a~~~g~~~~i~~p~-~~--~~~~~~~~~----~~Ga~v~~~~ 122 (273)
|.+.+++.+++++|++++++.|+ .. ++.-++.++ ..|+.+..+.
T Consensus 207 rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~a~~~g~~v~~~~ 257 (359)
T 1zq6_A 207 AVANSALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQVSH 257 (359)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHSCEEEEEC
T ss_pred chHHHHHHHHHHcCCEEEEEcCccccCCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 89999999999999999999998 43 333333333 6788887765
No 200
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=55.86 E-value=41 Score=26.92 Aligned_cols=55 Identities=15% Similarity=0.164 Sum_probs=36.9
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS-IERRIILRALGAEVYLADP 123 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~-~~~~~~~~~~Ga~v~~~~~ 123 (273)
.+.+|+..+|.-|.++|..-...|.+++++...... ....+.++..|.++..+..
T Consensus 12 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 67 (255)
T 1fmc_A 12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRC 67 (255)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEc
Confidence 455788888999999999988889987776553211 1123445556777766543
No 201
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=55.75 E-value=55 Score=27.86 Aligned_cols=57 Identities=23% Similarity=0.312 Sum_probs=39.7
Q ss_pred HHHH-cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEEEE
Q 024040 58 DAED-KGLITPGKTVLIELTSGNTGIGLAFIAASRGY-KLIIIMPSTYSIERRIILRALGAEVYL 120 (273)
Q Consensus 58 ~a~~-~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~-~~~i~~p~~~~~~~~~~~~~~Ga~v~~ 120 (273)
++.. ...+ +|++.+|... |..|.+++..|+.+|. +++++.+ ++.+++.++.+ ++.+.
T Consensus 155 ~~l~~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~---~~~~~~~~~~l-a~~v~ 213 (343)
T 2dq4_A 155 HTVYAGSGV-SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDP---NPYRLAFARPY-ADRLV 213 (343)
T ss_dssp HHHHSTTCC-TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECS---CHHHHGGGTTT-CSEEE
T ss_pred HHHHHhCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECC---CHHHHHHHHHh-HHhcc
Confidence 3444 5556 8877445444 9999999999999999 7666543 45777777777 75443
No 202
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=55.71 E-value=61 Score=29.69 Aligned_cols=59 Identities=32% Similarity=0.260 Sum_probs=41.1
Q ss_pred CCCCCeEEEeeCCChHHHHHHHHHHHcCCe-EEEEecCCC----CHHHHHHHHHcCCEEEEeCC
Q 024040 65 ITPGKTVLIELTSGNTGIGLAFIAASRGYK-LIIIMPSTY----SIERRIILRALGAEVYLADP 123 (273)
Q Consensus 65 ~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~-~~i~~p~~~----~~~~~~~~~~~Ga~v~~~~~ 123 (273)
++++.+.+|+..+|.-|.++|......|.+ ++++..... .....+.++..|+++..+..
T Consensus 256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~ 319 (511)
T 2z5l_A 256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAAC 319 (511)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEEC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEe
Confidence 445567788888899999999988888996 444443321 12345667778999877654
No 203
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=55.66 E-value=77 Score=25.26 Aligned_cols=56 Identities=18% Similarity=0.139 Sum_probs=39.6
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS--IERRIILRALGAEVYLADPA 124 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~--~~~~~~~~~~Ga~v~~~~~~ 124 (273)
...+||..+|--|.++|..-.+.|.++++....... ......++..|.++..+..+
T Consensus 8 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 65 (255)
T 3icc_A 8 KVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGAN 65 (255)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecC
Confidence 455777777888999999988899988876554332 23355667788888776543
No 204
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=55.49 E-value=45 Score=27.48 Aligned_cols=72 Identities=19% Similarity=0.123 Sum_probs=43.8
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTY-SIERRIILRALGAEVYLADPAV-GFEGFVKKGEEILNR 140 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~-~~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 140 (273)
...+||..+|--|.++|..-.+.|.+++++-.... .....+.++..|.++..+..+- +.++..+...+..++
T Consensus 25 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 98 (279)
T 3sju_A 25 QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVER 98 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 35588888888999999998889999777654311 1122445566687776665332 233333334444333
No 205
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=55.16 E-value=36 Score=28.15 Aligned_cols=72 Identities=15% Similarity=0.208 Sum_probs=45.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHHh
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS--IERRIILRALGAEVYLADPA-VGFEGFVKKGEEILNR 140 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~--~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 140 (273)
...+||..+|--|.++|......|.+++++...... ......++..|.++..+..+ .+.++..+...+..++
T Consensus 30 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 104 (280)
T 4da9_A 30 PVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAE 104 (280)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHH
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 345888888889999999988899998877643221 12344566678887766533 2233444444444433
No 206
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=55.10 E-value=57 Score=26.64 Aligned_cols=54 Identities=20% Similarity=0.062 Sum_probs=36.3
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS-IERRIILRALGAEVYLAD 122 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~-~~~~~~~~~~Ga~v~~~~ 122 (273)
...+|+..+|--|.++|....+.|.+++++...... ....+.++..|.++..+.
T Consensus 22 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 76 (273)
T 1ae1_A 22 TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSV 76 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEE
Confidence 455888888999999999999999997776543211 112334455677766554
No 207
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=55.01 E-value=60 Score=26.56 Aligned_cols=72 Identities=19% Similarity=0.192 Sum_probs=44.6
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS--IERRIILRALGAEVYLADPAV-GFEGFVKKGEEILNR 140 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~--~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 140 (273)
...+||..+|--|.++|..-.+.|.++++....... ....+.++..|.++..+..+- +.++..+...+..++
T Consensus 29 k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~ 103 (269)
T 4dmm_A 29 RIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIER 103 (269)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 355777778888999999988899998876653221 223445666788877665432 233333444444443
No 208
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=55.00 E-value=57 Score=26.13 Aligned_cols=72 Identities=17% Similarity=0.236 Sum_probs=44.7
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS--IERRIILRALGAEVYLADPAV-GFEGFVKKGEEILNR 140 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~--~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 140 (273)
.+.+||..+|--|.++|....+.|.++++....... ....+.++..|.++..+..+- +.++..+...+..++
T Consensus 5 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 79 (246)
T 3osu_A 5 KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQ 79 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 345778888888999999988999998876654221 223445666788777665432 233334444444333
No 209
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=54.51 E-value=49 Score=27.75 Aligned_cols=50 Identities=20% Similarity=0.218 Sum_probs=35.4
Q ss_pred CCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 024040 66 TPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVY 119 (273)
Q Consensus 66 ~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~ 119 (273)
.++.+ +..-..|+.|.++|..++.+|.+++++-+. ..+.+.+..+|++++
T Consensus 155 l~g~~-v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~---~~~~~~~~~~g~~~~ 204 (300)
T 2rir_A 155 IHGSQ-VAVLGLGRTGMTIARTFAALGANVKVGARS---SAHLARITEMGLVPF 204 (300)
T ss_dssp STTSE-EEEECCSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHTTCEEE
T ss_pred CCCCE-EEEEcccHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHCCCeEE
Confidence 34444 777788999999999999999987776553 345555556787653
No 210
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=54.42 E-value=90 Score=25.67 Aligned_cols=72 Identities=14% Similarity=0.147 Sum_probs=46.8
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--------HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHH
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS--------IERRIILRALGAEVYLADPAV-GFEGFVKKGEEILN 139 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~--------~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~ 139 (273)
...+||..+|--|.++|..-.+.|.+++++-..... ....+.++..|.++..+..+- +.++..+...+..+
T Consensus 10 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 89 (285)
T 3sc4_A 10 KTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKTVE 89 (285)
T ss_dssp CEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 455888888889999999988899988877654321 233555677788887775432 23344444444444
Q ss_pred h
Q 024040 140 R 140 (273)
Q Consensus 140 ~ 140 (273)
+
T Consensus 90 ~ 90 (285)
T 3sc4_A 90 Q 90 (285)
T ss_dssp H
T ss_pred H
Confidence 3
No 211
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=54.41 E-value=30 Score=28.10 Aligned_cols=72 Identities=21% Similarity=0.240 Sum_probs=42.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS-IERRIILRALGAEVYLADPAV-GFEGFVKKGEEILNR 140 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~-~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 140 (273)
...+||..+|--|.++|....+.|.+++++-..... ......++..|.++..+..+- +.++..+...+..++
T Consensus 7 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (257)
T 3imf_A 7 KVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEK 80 (257)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 455777788888999999988899997776543211 112233445677776654332 233334444444433
No 212
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=54.27 E-value=37 Score=28.74 Aligned_cols=100 Identities=15% Similarity=0.196 Sum_probs=61.2
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCCC
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQF 150 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 150 (273)
+|....-|+.|.++|..++.+|++++.+-+...+... .+ .+. +.+ ++.++. +...+.-.
T Consensus 124 tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~--------~~--~~~---~l~-------ell~~a-DiV~l~~P 182 (290)
T 3gvx_A 124 ALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV--------DV--ISE---SPA-------DLFRQS-DFVLIAIP 182 (290)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTTC--------SE--ECS---SHH-------HHHHHC-SEEEECCC
T ss_pred hheeeccCchhHHHHHHHHhhCcEEEEEecccccccc--------cc--ccC---ChH-------HHhhcc-CeEEEEee
Confidence 4778889999999999999999999988664322111 11 121 122 233343 45544332
Q ss_pred CCCcchHhhhhchHHHHHHhhCCCcCEEEEecCCCccH--HHHHHHHHh
Q 024040 151 ENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTGGTV--TGAGRFLKE 197 (273)
Q Consensus 151 ~~~~~~~~g~~t~~~Ei~~q~~~~~d~iv~p~G~Gg~~--~Gi~~~~k~ 197 (273)
.++.. ...+..+.+..+ +++.+++-+|.|+.. ..+..++++
T Consensus 183 ~t~~t----~~li~~~~l~~m--k~gailIN~aRG~~vd~~aL~~aL~~ 225 (290)
T 3gvx_A 183 LTDKT----RGMVNSRLLANA--RKNLTIVNVARADVVSKPDMIGFLKE 225 (290)
T ss_dssp CCTTT----TTCBSHHHHTTC--CTTCEEEECSCGGGBCHHHHHHHHHH
T ss_pred ccccc----hhhhhHHHHhhh--hcCceEEEeehhcccCCcchhhhhhh
Confidence 23322 223456677777 578999999998864 445555554
No 213
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=54.20 E-value=77 Score=24.85 Aligned_cols=49 Identities=27% Similarity=0.189 Sum_probs=37.3
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-HcCCEEEEeCC
Q 024040 72 LIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILR-ALGAEVYLADP 123 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~-~~Ga~v~~~~~ 123 (273)
|+....|+.|..+|......|.+++++-. ++.+.+.+. .+|.+++..+.
T Consensus 3 iiIiG~G~~G~~la~~L~~~g~~v~vid~---~~~~~~~l~~~~~~~~i~gd~ 52 (218)
T 3l4b_C 3 VIIIGGETTAYYLARSMLSRKYGVVIINK---DRELCEEFAKKLKATIIHGDG 52 (218)
T ss_dssp EEEECCHHHHHHHHHHHHHTTCCEEEEES---CHHHHHHHHHHSSSEEEESCT
T ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEEC---CHHHHHHHHHHcCCeEEEcCC
Confidence 56667899999999999999999888754 456666654 46888766554
No 214
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=54.10 E-value=59 Score=26.18 Aligned_cols=71 Identities=11% Similarity=0.086 Sum_probs=42.0
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 024040 70 TVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS-IERRIILRALGAEVYLADPAV-GFEGFVKKGEEILNR 140 (273)
Q Consensus 70 ~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~-~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 140 (273)
..+|+..+|.-|.++|..-.+.|.+++++...... ....+.++..|.++..+..+- +.++..+...+..++
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 76 (256)
T 1geg_A 4 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKT 76 (256)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 45888888889999999988899987776543211 112334555676665554322 233333334444443
No 215
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=53.80 E-value=26 Score=28.48 Aligned_cols=51 Identities=10% Similarity=-0.001 Sum_probs=35.5
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLA 121 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~ 121 (273)
.+||..+|--|.++|....+.|.+++++............++..|.+++.+
T Consensus 4 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~ 54 (254)
T 1zmt_A 4 AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM 54 (254)
T ss_dssp EEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE
Confidence 478888888999999999999998777654332333333355667777666
No 216
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=53.76 E-value=62 Score=26.26 Aligned_cols=71 Identities=18% Similarity=0.098 Sum_probs=44.5
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHHh
Q 024040 70 TVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS--IERRIILRALGAEVYLADPA-VGFEGFVKKGEEILNR 140 (273)
Q Consensus 70 ~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~--~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 140 (273)
+.+||..+|--|.++|....+.|.++++....... ....+.++..|.++..+..+ .+.++..+...+..++
T Consensus 28 ~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 101 (267)
T 4iiu_A 28 SVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQ 101 (267)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 45788888888999999988999998776654322 23355566677777665433 2333444444444443
No 217
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=53.73 E-value=64 Score=25.87 Aligned_cols=55 Identities=20% Similarity=0.166 Sum_probs=37.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH--HHHHHHHHcCCEEEEeCC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSI--ERRIILRALGAEVYLADP 123 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~--~~~~~~~~~Ga~v~~~~~ 123 (273)
.+.+|+..+|.-|.++|....+.|.+++++.....+. ...+.++..|.++..+..
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~ 64 (261)
T 1gee_A 8 KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64 (261)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEC
Confidence 3557788888899999999888999987776522111 123345556888766654
No 218
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=53.66 E-value=79 Score=26.67 Aligned_cols=54 Identities=15% Similarity=-0.031 Sum_probs=33.7
Q ss_pred EEEeeCCChHHHHHHHHHHHcC------------CeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC
Q 024040 71 VLIELTSGNTGIGLAFIAASRG------------YKLIIIMPSTYSIERRIILRALGAEVYLADPA 124 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g------------~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~ 124 (273)
.++..++|..+..+|..+.... -.-.|+++...-..-...++.+|++++.++.+
T Consensus 88 ~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~ 153 (397)
T 3f9t_A 88 YGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIK 153 (397)
T ss_dssp EEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBC
T ss_pred CEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHHHHHHcCceeEEEeeC
Confidence 3777788877776666543321 12344455444445666777889999998754
No 219
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=53.63 E-value=68 Score=24.01 Aligned_cols=20 Identities=15% Similarity=0.195 Sum_probs=12.3
Q ss_pred CCHHHHHHHHHcCCEEEEeC
Q 024040 103 YSIERRIILRALGAEVYLAD 122 (273)
Q Consensus 103 ~~~~~~~~~~~~Ga~v~~~~ 122 (273)
......+.+...|++|+...
T Consensus 28 p~~a~a~~La~~Ga~vvi~~ 47 (157)
T 3gxh_A 28 PNEQQFSLLKQAGVDVVINL 47 (157)
T ss_dssp CCHHHHHHHHHTTCCEEEEC
T ss_pred CCHHHHHHHHHcCCCEEEEC
Confidence 34555666666777776653
No 220
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=53.59 E-value=51 Score=26.61 Aligned_cols=55 Identities=24% Similarity=0.250 Sum_probs=37.8
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH--HHHHHHHHcCCEEEEeCC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSI--ERRIILRALGAEVYLADP 123 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~--~~~~~~~~~Ga~v~~~~~ 123 (273)
.+.+|+..+|.-|.++|....+.|.+++++....... ...+.++..|.++..+..
T Consensus 22 k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~ 78 (274)
T 1ja9_A 22 KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQA 78 (274)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEe
Confidence 4558888889999999999888999988776532111 123445566887766553
No 221
>3gbc_A Pyrazinamidase/nicotinamidas PNCA; nicotinamidase - pyrazinamidase, resistance to pyrazinamide, hydrolase; 2.20A {Mycobacterium tuberculosis} PDB: 3pl1_A
Probab=53.56 E-value=76 Score=24.60 Aligned_cols=57 Identities=14% Similarity=0.074 Sum_probs=39.2
Q ss_pred HHHcCCCCCCCeEEEeeCCChHH-HHHHHHHHHcCCeEEEEecC--CCCHH----HHHHHHHcCCEEE
Q 024040 59 AEDKGLITPGKTVLIELTSGNTG-IGLAFIAASRGYKLIIIMPS--TYSIE----RRIILRALGAEVY 119 (273)
Q Consensus 59 a~~~g~~~~g~~~vv~~ssGN~g-~a~A~~a~~~g~~~~i~~p~--~~~~~----~~~~~~~~Ga~v~ 119 (273)
+.+.|. ++-+|+.-..+.+ .+.|.-|..+|++++++..- ..++. -++.|+..|++++
T Consensus 120 L~~~gi----~~lvv~G~~t~~CV~~Ta~da~~~G~~v~v~~Da~~~~~~~~~~~al~~m~~~G~~i~ 183 (186)
T 3gbc_A 120 LRQRGV----DEVDVVGIATDHCVRQTAEDAVRNGLATRVLVDLTAGVSADTTVAALEEMRTASVELV 183 (186)
T ss_dssp HHHTTC----CEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECSCHHHHHHHHHHHHHTTCEEE
T ss_pred HHhcCC----CEEEEEEecccHHHHHHHHHHHHCCCeEEEEhhhcCCCCHHHHHHHHHHHHHcCCEEe
Confidence 344564 4546666667777 57777899999999988753 22332 3778888999875
No 222
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=53.45 E-value=55 Score=26.56 Aligned_cols=55 Identities=20% Similarity=0.202 Sum_probs=36.3
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS-IERRIILRALGAEVYLADP 123 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~-~~~~~~~~~~Ga~v~~~~~ 123 (273)
...+|+..+|.-|.++|......|.+++++...... ......++..|.++..+..
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 63 (262)
T 1zem_A 8 KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVC 63 (262)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEe
Confidence 455888888889999999999999997776543211 1112344555777665543
No 223
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=53.42 E-value=57 Score=26.38 Aligned_cols=55 Identities=15% Similarity=0.085 Sum_probs=36.2
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS-IERRIILRALGAEVYLADP 123 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~-~~~~~~~~~~Ga~v~~~~~ 123 (273)
...+||..+|--|.++|....+.|.+++++...... ....+.++..|.++..+..
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 61 (260)
T 2qq5_A 6 QVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVC 61 (260)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEEC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEEC
Confidence 455788888889999999988899987776543111 1123344555777766654
No 224
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=53.39 E-value=82 Score=24.90 Aligned_cols=55 Identities=18% Similarity=0.231 Sum_probs=38.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH--HHHHHHHHcCCEEEEeCC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSI--ERRIILRALGAEVYLADP 123 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~--~~~~~~~~~Ga~v~~~~~ 123 (273)
.+.+|+..+|.-|.++|......|.+++++....... ...+.++..|.++..+..
T Consensus 6 ~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 62 (247)
T 2hq1_A 6 KTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKG 62 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEES
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEEC
Confidence 4558888889999999999989999888773333222 233455667877766543
No 225
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=53.03 E-value=50 Score=27.82 Aligned_cols=51 Identities=8% Similarity=0.008 Sum_probs=34.5
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLAD 122 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~ 122 (273)
.++..++|..+..++..+- ..-.-.|+++...-......++..|++++.++
T Consensus 71 ~v~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~ 121 (371)
T 2e7j_A 71 VARVTNGAREAKFAVMHSL-AKKDAWVVMDENCHYSSYVAAERAGLNIALVP 121 (371)
T ss_dssp EEEEESSHHHHHHHHHHHH-CCTTCEEEEETTCCHHHHHHHHHTTCEEEEEC
T ss_pred EEEEeCChHHHHHHHHHHH-hCCCCEEEEccCcchHHHHHHHHcCCeEEEee
Confidence 3777777777777776654 33233555665555566666888999999988
No 226
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=52.64 E-value=59 Score=26.25 Aligned_cols=54 Identities=17% Similarity=0.165 Sum_probs=36.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS-IERRIILRALGAEVYLAD 122 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~-~~~~~~~~~~Ga~v~~~~ 122 (273)
...+|+..+|.-|.++|....+.|.+++++...... ....+.++..|.++..+.
T Consensus 15 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~ 69 (260)
T 2zat_A 15 KVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTV 69 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEE
Confidence 455888888889999999988899988776543211 112334555677665554
No 227
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=52.53 E-value=76 Score=25.03 Aligned_cols=55 Identities=16% Similarity=0.202 Sum_probs=36.6
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH--HHHHHHHHcCCEEEEeCCC
Q 024040 70 TVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSI--ERRIILRALGAEVYLADPA 124 (273)
Q Consensus 70 ~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~--~~~~~~~~~Ga~v~~~~~~ 124 (273)
..+|+..+|--|.++|....+.|.++++....+... ...+.++..|.++..+..+
T Consensus 3 ~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D 59 (244)
T 1edo_A 3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGD 59 (244)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCC
Confidence 447788888899999999888999988754332111 1123455568787766543
No 228
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=52.31 E-value=64 Score=31.39 Aligned_cols=59 Identities=27% Similarity=0.295 Sum_probs=41.1
Q ss_pred CCCCeEEEeeCCChHHHHHHHHHH-HcCCeEEEEecCC---C--CHHHHHHHHHcCCEEEEeCCC
Q 024040 66 TPGKTVLIELTSGNTGIGLAFIAA-SRGYKLIIIMPST---Y--SIERRIILRALGAEVYLADPA 124 (273)
Q Consensus 66 ~~g~~~vv~~ssGN~g~a~A~~a~-~~g~~~~i~~p~~---~--~~~~~~~~~~~Ga~v~~~~~~ 124 (273)
.++.+.+|+..+|-.|+++|..-. ..|.+.++++..+ . ....++.++..|++++.+..+
T Consensus 528 ~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~D 592 (795)
T 3slk_A 528 DAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACD 592 (795)
T ss_dssp CTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECC
T ss_pred ccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEee
Confidence 345566777777888899888766 7899766665432 2 234567788899999877543
No 229
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=52.29 E-value=49 Score=27.37 Aligned_cols=72 Identities=13% Similarity=0.065 Sum_probs=43.3
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS-IERRIILRALGAEVYLADPAV-GFEGFVKKGEEILNR 140 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~-~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 140 (273)
...+||..+|--|.++|..-.+.|.+++++-..... ....+.++..|.++..+..+- +.++..+...+..++
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 102 (283)
T 3v8b_A 29 PVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLK 102 (283)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 355888888889999999988899988776543211 122334455677776665332 233334444444333
No 230
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=52.25 E-value=57 Score=26.12 Aligned_cols=54 Identities=19% Similarity=0.217 Sum_probs=36.3
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH--HHHHHHHHcCCEEEEeC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSI--ERRIILRALGAEVYLAD 122 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~--~~~~~~~~~Ga~v~~~~ 122 (273)
...+|+..+|--|.++|....+.|.+++++...+... ...+.++..|.++..+.
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 60 (246)
T 2uvd_A 5 KVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVR 60 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 4557888888899999999888999988776522111 12334555677766554
No 231
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=52.23 E-value=51 Score=27.43 Aligned_cols=72 Identities=15% Similarity=0.023 Sum_probs=42.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHHh
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS-IERRIILRALGAEVYLADPA-VGFEGFVKKGEEILNR 140 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~-~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 140 (273)
...+||..+|.-|.++|......|.+++++...... ....+.++..|.++..+..+ .+.++..+...+..++
T Consensus 35 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 108 (291)
T 3cxt_A 35 KIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCDVTDEDGIQAMVAQIESE 108 (291)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Confidence 455888888999999999988899998776543111 11233455566655544332 2233333334444443
No 232
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=51.93 E-value=1.2e+02 Score=26.17 Aligned_cols=103 Identities=22% Similarity=0.161 Sum_probs=66.3
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCCC
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQF 150 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 150 (273)
+|....-|+-|.++|..++.+|++++++-|.. +.. ....+|++. + +. .++.++. +...+.-.
T Consensus 167 tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~---~~~~~g~~~--~----~l-------~ell~~a-DvV~l~~P 228 (335)
T 2g76_A 167 TLGILGLGRIGREVATRMQSFGMKTIGYDPII-SPE---VSASFGVQQ--L----PL-------EEIWPLC-DFITVHTP 228 (335)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSSS-CHH---HHHHTTCEE--C----CH-------HHHGGGC-SEEEECCC
T ss_pred EEEEEeECHHHHHHHHHHHHCCCEEEEECCCc-chh---hhhhcCcee--C----CH-------HHHHhcC-CEEEEecC
Confidence 47778899999999999999999987776542 222 345678753 1 12 2333444 45554332
Q ss_pred CCCcchHhhhhchHHHHHHhhCCCcCEEEEecCCCccHH--HHHHHHHh
Q 024040 151 ENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTGGTVT--GAGRFLKE 197 (273)
Q Consensus 151 ~~~~~~~~g~~t~~~Ei~~q~~~~~d~iv~p~G~Gg~~~--Gi~~~~k~ 197 (273)
.++.. ...+..+++..+ +++.+++-+|+|+..- .+..+++.
T Consensus 229 ~t~~t----~~li~~~~l~~m--k~gailIN~arg~vvd~~aL~~aL~~ 271 (335)
T 2g76_A 229 LLPST----TGLLNDNTFAQC--KKGVRVVNCARGGIVDEGALLRALQS 271 (335)
T ss_dssp CCTTT----TTSBCHHHHTTS--CTTEEEEECSCTTSBCHHHHHHHHHH
T ss_pred CCHHH----HHhhCHHHHhhC--CCCcEEEECCCccccCHHHHHHHHHh
Confidence 23221 122345677777 5789999999998766 56666665
No 233
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=51.93 E-value=58 Score=27.05 Aligned_cols=71 Identities=11% Similarity=0.045 Sum_probs=44.2
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC---CHHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHH
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTY---SIERRIILRALGAEVYLADPAV-GFEGFVKKGEEILN 139 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~---~~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~ 139 (273)
...+||..+|--|.++|..-.+.|.+++++..... .......++..|.++..+..+- +.++..+...+..+
T Consensus 50 k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 124 (294)
T 3r3s_A 50 RKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKARE 124 (294)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 45588888888999999998899999877654311 1122344566788888776442 23333333444433
No 234
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=51.84 E-value=31 Score=29.26 Aligned_cols=53 Identities=21% Similarity=0.097 Sum_probs=38.8
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-CCHHHHH---HHHHcCCEEEEeC
Q 024040 70 TVLIELTSGNTGIGLAFIAASRGYKLIIIMPST-YSIERRI---ILRALGAEVYLAD 122 (273)
Q Consensus 70 ~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~-~~~~~~~---~~~~~Ga~v~~~~ 122 (273)
+.+|+..+|.-|.+++......|.+++++.... ..+.+.. .++..|.+++..+
T Consensus 12 ~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~D 68 (346)
T 3i6i_A 12 RVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGL 68 (346)
T ss_dssp CEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECC
T ss_pred eEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEee
Confidence 348888999999999999988999999988754 3344443 3445577766654
No 235
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=51.80 E-value=60 Score=26.48 Aligned_cols=55 Identities=20% Similarity=0.182 Sum_probs=35.6
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHH-HHcCCEEEEeCC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS-IERRIIL-RALGAEVYLADP 123 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~-~~~~~~~-~~~Ga~v~~~~~ 123 (273)
...+|+..+|.-|.++|....+.|.+++++...... ....+.+ +..|.++..+..
T Consensus 22 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~ 78 (267)
T 1vl8_A 22 RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC 78 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEc
Confidence 455888888999999999988999998776543111 1112223 345777765543
No 236
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=51.78 E-value=98 Score=25.32 Aligned_cols=155 Identities=8% Similarity=0.031 Sum_probs=80.1
Q ss_pred hhhHHHHHHHHHHHHcCCCCCCCeEEEeeCC-ChHHH--HHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 024040 47 VKDRIAYSMIKDAEDKGLITPGKTVLIELTS-GNTGI--GLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADP 123 (273)
Q Consensus 47 ~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ss-GN~g~--a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~ 123 (273)
|=.+....+-..+.+.|. . ++...+ .+... .+.-.....++..+|++|...+...++.++..|--++.++.
T Consensus 41 ~~~~~~~gi~~~a~~~g~-----~-~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~l~~~~iPvV~i~~ 114 (305)
T 3huu_A 41 FNSDVLNGINQACNVRGY-----S-TRMTVSENSGDLYHEVKTMIQSKSVDGFILLYSLKDDPIEHLLNEFKVPYLIVGK 114 (305)
T ss_dssp HHHHHHHHHHHHHHHHTC-----E-EEECCCSSHHHHHHHHHHHHHTTCCSEEEESSCBTTCHHHHHHHHTTCCEEEESC
T ss_pred HHHHHHHHHHHHHHHCCC-----E-EEEEeCCCChHHHHHHHHHHHhCCCCEEEEeCCcCCcHHHHHHHHcCCCEEEECC
Confidence 334444444455666674 3 444444 33322 22223444688888888865555667777778888887764
Q ss_pred CC-----------ChhHHHHHHHHHHHhCC-CeEeeCCCCCCcc---hHhhhhch------------------HHHHHHh
Q 024040 124 AV-----------GFEGFVKKGEEILNRTP-NGYILGQFENPAN---PEIHYETT------------------GPEIWND 170 (273)
Q Consensus 124 ~~-----------~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~---~~~g~~t~------------------~~Ei~~q 170 (273)
.. .+......++.+.+... +..|+....+... ...||... +.+.+++
T Consensus 115 ~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 194 (305)
T 3huu_A 115 SLNYENIIHIDNDNIDAAYQLTQYLYHLGHRHILFLQESGHYAVTEDRSVGFKQYCDDVKISNDCVVIKSMNDLRDFIKQ 194 (305)
T ss_dssp CCSSTTCCEEECCHHHHHHHHHHHHHHTTCCSEEEEEESSCBHHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHHHC--
T ss_pred CCcccCCcEEEeCHHHHHHHHHHHHHHCCCCeEEEEcCCcccchhHHHHHHHHHHHHHcCCCcccEEecCcHHHHHHHHH
Confidence 21 12233344444444322 2333322111110 01233211 3444443
Q ss_pred h----CCCcCEEEEecCCCccHHHHHHHHHhhC----CCcEEEEEec
Q 024040 171 S----GGKVDAFIAGIGTGGTVTGAGRFLKEKN----PNIKVYGIEP 209 (273)
Q Consensus 171 ~----~~~~d~iv~p~G~Gg~~~Gi~~~~k~~~----~~~~vigVe~ 209 (273)
+ .+.||+||+. +..++.|+..++++.+ .++.|+|.+-
T Consensus 195 ~~l~~~~~~~ai~~~--nd~~A~g~~~al~~~g~~vP~di~vig~D~ 239 (305)
T 3huu_A 195 YCIDASHMPSVIITS--DVMLNMQLLNVLYEYQLRIPEDIQTATFNT 239 (305)
T ss_dssp ------CCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEESC
T ss_pred hhhcCCCCCCEEEEC--ChHHHHHHHHHHHHcCCCCCcceEEEEECC
Confidence 3 3468888873 5567778888988876 3577888764
No 237
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=51.75 E-value=1.1e+02 Score=25.91 Aligned_cols=107 Identities=18% Similarity=0.162 Sum_probs=66.7
Q ss_pred CCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeE
Q 024040 66 TPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGY 145 (273)
Q Consensus 66 ~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~ 145 (273)
..|.+ |.....|+.|.++|..++.+|++++++-+.. ... ..+.+|++. + +.+ ++.++. +..
T Consensus 140 l~g~~-vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~-~~~---~~~~~g~~~--~----~l~-------ell~~a-DvV 200 (313)
T 2ekl_A 140 LAGKT-IGIVGFGRIGTKVGIIANAMGMKVLAYDILD-IRE---KAEKINAKA--V----SLE-------ELLKNS-DVI 200 (313)
T ss_dssp CTTCE-EEEESCSHHHHHHHHHHHHTTCEEEEECSSC-CHH---HHHHTTCEE--C----CHH-------HHHHHC-SEE
T ss_pred CCCCE-EEEEeeCHHHHHHHHHHHHCCCEEEEECCCc-chh---HHHhcCcee--c----CHH-------HHHhhC-CEE
Confidence 34444 7777899999999999999999988775543 222 245678763 2 122 223343 455
Q ss_pred eeCCCCCCcchHhhhhchHHHHHHhhCCCcCEEEEecCCCccHH--HHHHHHHh
Q 024040 146 ILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTGGTVT--GAGRFLKE 197 (273)
Q Consensus 146 ~~~~~~~~~~~~~g~~t~~~Ei~~q~~~~~d~iv~p~G~Gg~~~--Gi~~~~k~ 197 (273)
.+.-..++.. ...+..+.+..+ +++.+++-+|.|+..- .+..+++.
T Consensus 201 vl~~P~~~~t----~~li~~~~l~~m--k~ga~lIn~arg~~vd~~aL~~aL~~ 248 (313)
T 2ekl_A 201 SLHVTVSKDA----KPIIDYPQFELM--KDNVIIVNTSRAVAVNGKALLDYIKK 248 (313)
T ss_dssp EECCCCCTTS----CCSBCHHHHHHS--CTTEEEEESSCGGGBCHHHHHHHHHT
T ss_pred EEeccCChHH----HHhhCHHHHhcC--CCCCEEEECCCCcccCHHHHHHHHHc
Confidence 5433323321 122335667777 4689999999998765 55555554
No 238
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=51.68 E-value=33 Score=28.32 Aligned_cols=55 Identities=18% Similarity=0.058 Sum_probs=35.8
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS-IERRIILRALGAEVYLADP 123 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~-~~~~~~~~~~Ga~v~~~~~ 123 (273)
...+|+..+|.-|.++|....+.|.+++++...... ....+.++..|.++..+..
T Consensus 45 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~ 100 (285)
T 2c07_A 45 KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAG 100 (285)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEEC
Confidence 455888888999999999888889988775432111 1123345556777766543
No 239
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=51.20 E-value=78 Score=25.91 Aligned_cols=71 Identities=17% Similarity=0.170 Sum_probs=43.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCC---EEEEeCCCC-ChhHHHHHHHHHHH
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTY-SIERRIILRALGA---EVYLADPAV-GFEGFVKKGEEILN 139 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~-~~~~~~~~~~~Ga---~v~~~~~~~-~~~~~~~~a~~~~~ 139 (273)
...+||..+|--|.++|..-...|.+++++-.... .....+.++..|. ++..+..+- +.++..+...+..+
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 87 (281)
T 3svt_A 12 RTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTA 87 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 45588888888999999998889999777654321 1123445566665 776654332 23333444444433
No 240
>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A
Probab=51.03 E-value=56 Score=29.11 Aligned_cols=72 Identities=17% Similarity=0.021 Sum_probs=45.5
Q ss_pred CeEEEeeCCChHHHHHHHHHH-HcCCeEEEEecCCCC-------------HHHHHHHHHcCCEEEEeCCCCChhHHHHHH
Q 024040 69 KTVLIELTSGNTGIGLAFIAA-SRGYKLIIIMPSTYS-------------IERRIILRALGAEVYLADPAVGFEGFVKKG 134 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~-~~g~~~~i~~p~~~~-------------~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a 134 (273)
++.+|+..|...|+|.|.+.+ +.|-.++++.-+..+ ..-.+.++..|.+.+.+..+..-++..+.+
T Consensus 51 K~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~~v 130 (401)
T 4ggo_A 51 KNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKAQV 130 (401)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHH
T ss_pred CEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHHHH
Confidence 456888877778888887765 678888777643221 123467788898888776554334444444
Q ss_pred HHHHHh
Q 024040 135 EEILNR 140 (273)
Q Consensus 135 ~~~~~~ 140 (273)
.+..++
T Consensus 131 i~~i~~ 136 (401)
T 4ggo_A 131 IEEAKK 136 (401)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 443333
No 241
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=50.95 E-value=65 Score=27.99 Aligned_cols=46 Identities=15% Similarity=0.306 Sum_probs=32.6
Q ss_pred CChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHH----HHHcCCEEEEeC
Q 024040 77 SGNTGIGLAFIAASRGYKLIIIMPSTY--SIERRII----LRALGAEVYLAD 122 (273)
Q Consensus 77 sGN~g~a~A~~a~~~g~~~~i~~p~~~--~~~~~~~----~~~~Ga~v~~~~ 122 (273)
.+|.+.|++.+++++|++++++.|+.- ++.-++. .+..|+++..+.
T Consensus 184 ~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~ 235 (339)
T 4a8t_A 184 ATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTD 235 (339)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHCCEEEEEC
T ss_pred CchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEEC
Confidence 378899999999999999999888753 3322222 245688877665
No 242
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=50.94 E-value=79 Score=28.32 Aligned_cols=51 Identities=20% Similarity=0.285 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHH-cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 024040 50 RIAYSMIKDAED-KGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPS 101 (273)
Q Consensus 50 R~a~~~~~~a~~-~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~ 101 (273)
||..+.+..+.+ .|.-..|. +|+....||-|..+|....++|.+++.+...
T Consensus 199 ~Gv~~~~~~~~~~~g~~l~gk-~vaVqG~GnVG~~~a~~L~~~GakVVavsD~ 250 (419)
T 3aoe_E 199 LGALLVLEALAKRRGLDLRGA-RVVVQGLGQVGAAVALHAERLGMRVVAVATS 250 (419)
T ss_dssp HHHHHHHHHHHHHHTCCCTTC-EEEEECCSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred HHHHHHHHHHHHhcCCCccCC-EEEEECcCHHHHHHHHHHHHCCCEEEEEEcC
Confidence 577777766554 44423344 4888889999999998888888888766654
No 243
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=50.88 E-value=34 Score=30.45 Aligned_cols=36 Identities=33% Similarity=0.545 Sum_probs=30.5
Q ss_pred CCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 024040 65 ITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPS 101 (273)
Q Consensus 65 ~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~ 101 (273)
+.|+.+ |....+|..|+.++.+|+++|++++++-+.
T Consensus 32 ~~~~~~-IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~ 67 (419)
T 4e4t_A 32 ILPGAW-LGMVGGGQLGRMFCFAAQSMGYRVAVLDPD 67 (419)
T ss_dssp CCTTCE-EEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCCCE-EEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 556665 888889999999999999999999887654
No 244
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=50.43 E-value=1.1e+02 Score=28.14 Aligned_cols=97 Identities=14% Similarity=0.153 Sum_probs=61.8
Q ss_pred CCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCC
Q 024040 63 GLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTP 142 (273)
Q Consensus 63 g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~ 142 (273)
+....|.+ |+....|+-|.++|..++.+|.+++++-+. ..+.......|.++. +.+ ++.++.
T Consensus 272 g~~L~Gkt-VgIIG~G~IG~~vA~~l~~~G~~V~v~d~~---~~~~~~a~~~G~~~~------~l~-------ell~~a- 333 (494)
T 3d64_A 272 DVMIAGKI-AVVAGYGDVGKGCAQSLRGLGATVWVTEID---PICALQAAMEGYRVV------TME-------YAADKA- 333 (494)
T ss_dssp CCCCTTCE-EEEECCSHHHHHHHHHHHTTTCEEEEECSC---HHHHHHHHTTTCEEC------CHH-------HHTTTC-
T ss_pred ccccCCCE-EEEEccCHHHHHHHHHHHHCCCEEEEEeCC---hHhHHHHHHcCCEeC------CHH-------HHHhcC-
Confidence 43344555 888899999999999999999998877543 333322334577641 122 233333
Q ss_pred CeEeeCCCCCCcchHhhhhchHHHHHHhhCCCcCEEEEecCCCcc
Q 024040 143 NGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTGGT 187 (273)
Q Consensus 143 ~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~~~d~iv~p~G~Gg~ 187 (273)
+.+++.. .+. ..+..|.++++ ++..+++-+|.|+.
T Consensus 334 DiVi~~~-~t~-------~lI~~~~l~~M--K~gAilINvgrg~v 368 (494)
T 3d64_A 334 DIFVTAT-GNY-------HVINHDHMKAM--RHNAIVCNIGHFDS 368 (494)
T ss_dssp SEEEECS-SSS-------CSBCHHHHHHC--CTTEEEEECSSSSC
T ss_pred CEEEECC-Ccc-------cccCHHHHhhC--CCCcEEEEcCCCcc
Confidence 5555543 222 22345777887 57899999999986
No 245
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=50.31 E-value=47 Score=27.29 Aligned_cols=73 Identities=15% Similarity=0.099 Sum_probs=44.5
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHHhC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTY-SIERRIILRALGAEVYLADPAV-GFEGFVKKGEEILNRT 141 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~-~~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~~ 141 (273)
...+||..+|--|.++|..-.+.|.+++++-.... .....+.++..|.++..+..+- +.++..+...+..++.
T Consensus 27 k~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (271)
T 4ibo_A 27 RTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQG 101 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 45577778888899999988889988666533211 1122445666788887776432 2334444445554443
No 246
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A
Probab=50.11 E-value=77 Score=28.49 Aligned_cols=72 Identities=13% Similarity=0.132 Sum_probs=45.3
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRT 141 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~ 141 (273)
...+||..+|--|.++|..-.+.|.+++++-.........+..+..+.+++.++-. +.++..+...+..++.
T Consensus 214 k~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvt-d~~~v~~~~~~~~~~~ 285 (454)
T 3u0b_A 214 KVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVT-ADDAVDKITAHVTEHH 285 (454)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTT-STTHHHHHHHHHHHHS
T ss_pred CEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecC-CHHHHHHHHHHHHHHc
Confidence 45577777888889998888888998766544332333344456678888877643 2334444444444443
No 247
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=50.10 E-value=63 Score=26.02 Aligned_cols=54 Identities=20% Similarity=0.065 Sum_probs=35.5
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS-IERRIILRALGAEVYLAD 122 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~-~~~~~~~~~~Ga~v~~~~ 122 (273)
.+.+|+..+|--|.++|....+.|.+++++...... ......++..|.++..+.
T Consensus 15 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 69 (266)
T 1xq1_A 15 KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSV 69 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEE
Confidence 455778788889999999988899988777653211 112334455676665554
No 248
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=50.07 E-value=77 Score=25.74 Aligned_cols=55 Identities=20% Similarity=0.131 Sum_probs=37.9
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHH-HHHHHHHcCCEEEEeCC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIE-RRIILRALGAEVYLADP 123 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~-~~~~~~~~Ga~v~~~~~ 123 (273)
...+|+..+|.-|.++|......|.+++++........ ..+.++.+|.++..+..
T Consensus 35 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 90 (279)
T 3ctm_A 35 KVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKC 90 (279)
T ss_dssp CEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEe
Confidence 35578888888999999998888999887765443332 23445556777665543
No 249
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=49.72 E-value=59 Score=26.75 Aligned_cols=55 Identities=16% Similarity=0.105 Sum_probs=42.4
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 024040 68 GKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADP 123 (273)
Q Consensus 68 g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~ 123 (273)
|+..|||.+++--|+++|..-.+.|.++++.-. +..+...+.++..|.++..+..
T Consensus 9 GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r-~~~~~~~~~~~~~g~~~~~~~~ 63 (247)
T 4hp8_A 9 GRKALVTGANTGLGQAIAVGLAAAGAEVVCAAR-RAPDETLDIIAKDGGNASALLI 63 (247)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-SCCHHHHHHHHHTTCCEEEEEC
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeC-CcHHHHHHHHHHhCCcEEEEEc
Confidence 345688888888999999999999999877644 3456678888899988876643
No 250
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=49.70 E-value=95 Score=25.25 Aligned_cols=54 Identities=17% Similarity=0.158 Sum_probs=35.5
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcC--CEEEEeC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS-IERRIILRALG--AEVYLAD 122 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~-~~~~~~~~~~G--a~v~~~~ 122 (273)
...+|+..+|.-|.++|......|.+++++...... ......++..| .++..+.
T Consensus 33 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (279)
T 1xg5_A 33 RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYR 89 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEE
Confidence 355888888999999999988899998777653211 11223444445 5565544
No 251
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=49.63 E-value=69 Score=28.01 Aligned_cols=47 Identities=15% Similarity=0.299 Sum_probs=34.0
Q ss_pred CCChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHH----HHHcCCEEEEeC
Q 024040 76 TSGNTGIGLAFIAASRGYKLIIIMPSTY--SIERRII----LRALGAEVYLAD 122 (273)
Q Consensus 76 ssGN~g~a~A~~a~~~g~~~~i~~p~~~--~~~~~~~----~~~~Ga~v~~~~ 122 (273)
-.+|.+.|++.+++++|++++++.|+.- ++.-++. .+..|+++..+.
T Consensus 161 D~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~ 213 (355)
T 4a8p_A 161 DATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTD 213 (355)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHSCEEEEEC
T ss_pred CCchhHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 3388999999999999999999999753 3322222 345688887665
No 252
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=49.53 E-value=98 Score=25.29 Aligned_cols=68 Identities=12% Similarity=0.031 Sum_probs=44.8
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHHh
Q 024040 70 TVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPA-VGFEGFVKKGEEILNR 140 (273)
Q Consensus 70 ~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 140 (273)
+.|||.+++--|+++|..-...|.++++.-. ...+...+...+.++..+..+ .+.++..+...+..++
T Consensus 4 ~vlVTGas~GIG~aia~~la~~Ga~V~~~~~---~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~ 72 (247)
T 3ged_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDI---DEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEK 72 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHH
Confidence 4588888888999999999999999877643 456666776667766655433 2333444444444443
No 253
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=49.44 E-value=59 Score=27.05 Aligned_cols=72 Identities=18% Similarity=0.218 Sum_probs=44.7
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC---------CCHHH----HHHHHHcCCEEEEeCCCC-ChhHHHHHH
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPST---------YSIER----RIILRALGAEVYLADPAV-GFEGFVKKG 134 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~---------~~~~~----~~~~~~~Ga~v~~~~~~~-~~~~~~~~a 134 (273)
...+||..++--|.++|..-.+.|.+++++-... ....+ ...++..|.++..+..+- +.++..+..
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 108 (299)
T 3t7c_A 29 KVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAAV 108 (299)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHH
Confidence 4558888888899999999889999988775431 11222 345667788887665432 233334444
Q ss_pred HHHHHh
Q 024040 135 EEILNR 140 (273)
Q Consensus 135 ~~~~~~ 140 (273)
.+..++
T Consensus 109 ~~~~~~ 114 (299)
T 3t7c_A 109 DDGVTQ 114 (299)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444333
No 254
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=49.37 E-value=61 Score=27.97 Aligned_cols=60 Identities=18% Similarity=0.187 Sum_probs=39.8
Q ss_pred cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHH----HHcCCEEEEeC
Q 024040 62 KGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTY--SIERRIIL----RALGAEVYLAD 122 (273)
Q Consensus 62 ~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~--~~~~~~~~----~~~Ga~v~~~~ 122 (273)
.|.+. |.+..+..-.+|.+.+++.+++++|++++++.|+.- ++.-++.+ +..|+++..+.
T Consensus 152 ~g~l~-glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~ 217 (323)
T 3gd5_A 152 FGRLA-GLKLAYVGDGNNVAHSLLLGCAKVGMSIAVATPEGFTPDPAVSARASEIAGRTGAEVQILR 217 (323)
T ss_dssp HSCCT-TCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEES
T ss_pred hCCCC-CCEEEEECCCCcHHHHHHHHHHHcCCEEEEECCCcccCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 45433 344223333489999999999999999999999854 33323322 35688887775
No 255
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=48.96 E-value=80 Score=25.42 Aligned_cols=55 Identities=20% Similarity=0.263 Sum_probs=34.8
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHc-CCEEEEeCC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS--IERRIILRAL-GAEVYLADP 123 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~--~~~~~~~~~~-Ga~v~~~~~ 123 (273)
...+||..+|--|.++|....+.|.+++++...... ....+.++.. |.++..+..
T Consensus 5 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 62 (260)
T 1x1t_A 5 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGA 62 (260)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEEC
Confidence 455778788889999999988899997776543211 1112223332 777766654
No 256
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=48.86 E-value=73 Score=27.15 Aligned_cols=32 Identities=22% Similarity=0.290 Sum_probs=23.8
Q ss_pred eEEEeeCCChHH---HHHHHHHHHcCCeEEEEecC
Q 024040 70 TVLIELTSGNTG---IGLAFIAASRGYKLIIIMPS 101 (273)
Q Consensus 70 ~~vv~~ssGN~g---~a~A~~a~~~g~~~~i~~p~ 101 (273)
+.+|.+..||.| .++|...+..|+++.|+++.
T Consensus 134 ~vlVlcG~GNNGGDGlv~AR~L~~~G~~V~V~~~~ 168 (306)
T 3d3j_A 134 TVALLCGPHVKGAQGISCGRHLANHDVQVILFLPN 168 (306)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCcEEEEEec
Confidence 457777888877 55566666689999998764
No 257
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=48.63 E-value=98 Score=24.76 Aligned_cols=68 Identities=18% Similarity=0.119 Sum_probs=41.7
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHH-HHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHH
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERR-IILRALGAEVYLADPAV-GFEGFVKKGEEILN 139 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~-~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~ 139 (273)
...+||..+|--|.++|......|.+++++-.. ..+. +..+.+|.++..+..+- +.++..+...+..+
T Consensus 7 k~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 76 (247)
T 3rwb_A 7 KTALVTGAAQGIGKAIAARLAADGATVIVSDIN---AEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQA 76 (247)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSC---HHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 455888888889999999999999987765432 2332 33344577777765432 23333333444433
No 258
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=48.49 E-value=58 Score=26.11 Aligned_cols=54 Identities=9% Similarity=0.035 Sum_probs=34.8
Q ss_pred CeEEEeeCCChHHHHHHHHHHH-cCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeC
Q 024040 69 KTVLIELTSGNTGIGLAFIAAS-RGYKLIIIMPSTYS-IERRIILRALGAEVYLAD 122 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~-~g~~~~i~~p~~~~-~~~~~~~~~~Ga~v~~~~ 122 (273)
.+.+|+..+|--|.++|..-.+ .|.+++++...... ....+.++..|.++..+.
T Consensus 5 k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~ 60 (276)
T 1wma_A 5 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQ 60 (276)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEE
Confidence 4557788888899999988777 89987777653111 122344555566555443
No 259
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=48.30 E-value=1e+02 Score=24.44 Aligned_cols=32 Identities=16% Similarity=0.261 Sum_probs=23.8
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMP 100 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p 100 (273)
...+|+..+|--|.++|..-...|.+++++-.
T Consensus 15 k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r 46 (247)
T 3i1j_A 15 RVILVTGAARGIGAAAARAYAAHGASVVLLGR 46 (247)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEec
Confidence 45577777788888888888888887666543
No 260
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=48.02 E-value=79 Score=25.49 Aligned_cols=52 Identities=21% Similarity=0.294 Sum_probs=35.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHH----HHHHHc-CCEEEEeCC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERR----IILRAL-GAEVYLADP 123 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~----~~~~~~-Ga~v~~~~~ 123 (273)
...+||..+|.-|.++|......|.+++++... ..+. +.++.. |.++..+..
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~l~~~~~~~~~~~~~ 64 (263)
T 3ai3_A 8 KVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQ---VDRLHEAARSLKEKFGVRVLEVAV 64 (263)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHHHHHCCCEEEEEC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC---HHHHHHHHHHHHHhcCCceEEEEc
Confidence 455888888999999999988899988776543 2222 223332 766665543
No 261
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=48.01 E-value=58 Score=26.59 Aligned_cols=72 Identities=17% Similarity=0.172 Sum_probs=44.3
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC---------CCHHH----HHHHHHcCCEEEEeCCCC-ChhHHHHHH
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPST---------YSIER----RIILRALGAEVYLADPAV-GFEGFVKKG 134 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~---------~~~~~----~~~~~~~Ga~v~~~~~~~-~~~~~~~~a 134 (273)
...+||..+|--|.++|..-.+.|.+++++-... ....+ ...++..|.++..+..+- +.++..+..
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 93 (278)
T 3sx2_A 14 KVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAAL 93 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence 4558888888899999999889999987765331 11222 334556788877665432 233334444
Q ss_pred HHHHHh
Q 024040 135 EEILNR 140 (273)
Q Consensus 135 ~~~~~~ 140 (273)
.+..++
T Consensus 94 ~~~~~~ 99 (278)
T 3sx2_A 94 QAGLDE 99 (278)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444443
No 262
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=47.81 E-value=69 Score=29.17 Aligned_cols=50 Identities=8% Similarity=-0.034 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHH-cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 024040 50 RIAYSMIKDAED-KGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMP 100 (273)
Q Consensus 50 R~a~~~~~~a~~-~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p 100 (273)
+|..+.+..+.+ .|.-..| ++|+....||-|..+|....++|.+++.+..
T Consensus 233 ~Gv~~~~~~~l~~~G~~l~g-~~vaVqG~GnVG~~~a~~L~~~GakvVavsD 283 (470)
T 2bma_A 233 YGLVYFVLEVLKSLNIPVEK-QTAVVSGSGNVALYCVQKLLHLNVKVLTLSD 283 (470)
T ss_dssp HHHHHHHHHHHHTTTCCGGG-CEEEEECSSHHHHHHHHHHHHTTCEECEEEE
T ss_pred HHHHHHHHHHHHhccCCcCC-CEEEEECCcHHHHHHHHHHHHCCCEEEEEEe
Confidence 577777777665 3422233 4488888899999999988888888775554
No 263
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=47.40 E-value=63 Score=26.78 Aligned_cols=32 Identities=22% Similarity=0.290 Sum_probs=23.7
Q ss_pred eEEEeeCCChHH---HHHHHHHHHcCCeEEEEecC
Q 024040 70 TVLIELTSGNTG---IGLAFIAASRGYKLIIIMPS 101 (273)
Q Consensus 70 ~~vv~~ssGN~g---~a~A~~a~~~g~~~~i~~p~ 101 (273)
+.+|.+..||.| ..+|...+..|+++.++++.
T Consensus 87 ~vlVlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~ 121 (259)
T 3d3k_A 87 TVALLCGPHVKGAQGISCGRHLANHDVQVILFLPN 121 (259)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECCB
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEec
Confidence 457777888877 55566666689999998764
No 264
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=47.22 E-value=18 Score=31.19 Aligned_cols=26 Identities=23% Similarity=0.378 Sum_probs=23.6
Q ss_pred CCChHHHHHHHHHHHcCCeEEEEecC
Q 024040 76 TSGNTGIGLAFIAASRGYKLIIIMPS 101 (273)
Q Consensus 76 ssGN~g~a~A~~a~~~g~~~~i~~p~ 101 (273)
|||..|.++|-++.+.|..++++..+
T Consensus 63 SSGkmG~aiAe~~~~~Ga~V~lv~g~ 88 (313)
T 1p9o_A 63 SSGRRGATSAEAFLAAGYGVLFLYRA 88 (313)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEecC
Confidence 66999999999999999999998864
No 265
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=47.11 E-value=94 Score=25.29 Aligned_cols=72 Identities=19% Similarity=0.092 Sum_probs=42.9
Q ss_pred CeEEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHH-cC-CEEEEeCCCCChhHHHHHHHHHHHhC
Q 024040 69 KTVLIELTS--GNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRA-LG-AEVYLADPAVGFEGFVKKGEEILNRT 141 (273)
Q Consensus 69 ~~~vv~~ss--GN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~-~G-a~v~~~~~~~~~~~~~~~a~~~~~~~ 141 (273)
...+||..+ |--|.++|....+.|.+++++..........+.++. .| ..++.++- .+.++..+...+..++.
T Consensus 7 k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~-~~~~~v~~~~~~~~~~~ 82 (275)
T 2pd4_A 7 KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDV-SKEEHFKSLYNSVKKDL 82 (275)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCT-TCHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCC-CCHHHHHHHHHHHHHHc
Confidence 455777766 789999999988899998877654333445555544 34 33444443 23334444444444443
No 266
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=47.08 E-value=59 Score=26.64 Aligned_cols=72 Identities=14% Similarity=0.073 Sum_probs=44.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC----------CCHHH----HHHHHHcCCEEEEeCCCC-ChhHHHHH
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPST----------YSIER----RIILRALGAEVYLADPAV-GFEGFVKK 133 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~----------~~~~~----~~~~~~~Ga~v~~~~~~~-~~~~~~~~ 133 (273)
...+||..+|--|.++|..-.+.|.+++++-... ....+ .+.++..|.++..+..+- +.++..+.
T Consensus 16 k~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 95 (280)
T 3pgx_A 16 RVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALREL 95 (280)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence 4558888888899999999889999988775310 12333 334556787776654332 23334444
Q ss_pred HHHHHHh
Q 024040 134 GEEILNR 140 (273)
Q Consensus 134 a~~~~~~ 140 (273)
..+..++
T Consensus 96 ~~~~~~~ 102 (280)
T 3pgx_A 96 VADGMEQ 102 (280)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444333
No 267
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=47.05 E-value=35 Score=27.81 Aligned_cols=25 Identities=32% Similarity=0.510 Sum_probs=22.1
Q ss_pred CChHHHHHHHHHHHcCCeEEEEecC
Q 024040 77 SGNTGIGLAFIAASRGYKLIIIMPS 101 (273)
Q Consensus 77 sGN~g~a~A~~a~~~g~~~~i~~p~ 101 (273)
||-.|.++|.++...|.+++++...
T Consensus 33 Sg~iG~aiA~~~~~~Ga~V~l~~~~ 57 (226)
T 1u7z_A 33 SGKMGFAIAAAAARRGANVTLVSGP 57 (226)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEECS
T ss_pred ccHHHHHHHHHHHHCCCEEEEEECC
Confidence 6999999999999999999887543
No 268
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=46.55 E-value=32 Score=29.99 Aligned_cols=36 Identities=36% Similarity=0.607 Sum_probs=30.3
Q ss_pred CCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 024040 65 ITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPS 101 (273)
Q Consensus 65 ~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~ 101 (273)
+.++.+ |....+|..|+.++.+++.+|++++++-+.
T Consensus 11 ~~~~k~-IlIlG~G~~g~~la~aa~~~G~~vi~~d~~ 46 (389)
T 3q2o_A 11 ILPGKT-IGIIGGGQLGRMMALAAKEMGYKIAVLDPT 46 (389)
T ss_dssp CCTTSE-EEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCE-EEEECCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 345555 888899999999999999999999988754
No 269
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=46.47 E-value=49 Score=27.40 Aligned_cols=71 Identities=17% Similarity=0.066 Sum_probs=41.2
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHH
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTY-SIERRIILRALGAEVYLADPAV-GFEGFVKKGEEILN 139 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~-~~~~~~~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~ 139 (273)
...+||..+|--|.++|..-.+.|.+++++-.... .......++..|.++..+..+- +.++..+...+..+
T Consensus 9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 81 (280)
T 3tox_A 9 KIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVR 81 (280)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 45577878888899999988889998666433211 0112333444677887775432 23333333444433
No 270
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=46.43 E-value=1e+02 Score=25.10 Aligned_cols=68 Identities=15% Similarity=0.174 Sum_probs=41.3
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHcCCEEEEeCCCC-ChhHHHHHHHHHHH
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRI-ILRALGAEVYLADPAV-GFEGFVKKGEEILN 139 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~-~~~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~ 139 (273)
...+||..+|--|.++|..-.+.|.+++++-.. ..+.+ ..+.+|.++..+..+- +.++..+...+..+
T Consensus 28 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 97 (266)
T 3grp_A 28 RKALVTGATGGIGEAIARCFHAQGAIVGLHGTR---EDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAER 97 (266)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHH
Confidence 455788888888999999888899987776432 33333 3445677776655332 23333333444433
No 271
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=46.26 E-value=88 Score=25.61 Aligned_cols=54 Identities=20% Similarity=0.217 Sum_probs=34.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH-HHHHHHHHcCC-EEEEeC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSI-ERRIILRALGA-EVYLAD 122 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~-~~~~~~~~~Ga-~v~~~~ 122 (273)
.+.+|+..+|--|.++|......|.+++++....... .....++..|. ++..+.
T Consensus 29 k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 84 (286)
T 1xu9_A 29 KKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIA 84 (286)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEe
Confidence 3557888888899999999888999877766532111 11223444454 665554
No 272
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=46.25 E-value=70 Score=29.36 Aligned_cols=51 Identities=14% Similarity=0.138 Sum_probs=34.1
Q ss_pred CeEEEeeCCChHH---HHHHHHHHHcCCeEEEEecCC-CCH---HHHHHHHHcCCEEE
Q 024040 69 KTVLIELTSGNTG---IGLAFIAASRGYKLIIIMPST-YSI---ERRIILRALGAEVY 119 (273)
Q Consensus 69 ~~~vv~~ssGN~g---~a~A~~a~~~g~~~~i~~p~~-~~~---~~~~~~~~~Ga~v~ 119 (273)
.+.+|.+..||.| ..+|...++.|+++.+|++.. .+. ..++.++.+|..+.
T Consensus 53 ~~v~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~g~~~~ 110 (502)
T 3rss_A 53 YRFLVLCGGGNNGGDGFVVARNLLGVVKDVLVVFLGKKKTPDCEYNYGLYKKFGGKVV 110 (502)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHTTTSSEEEEEECCSSCCHHHHHHHHHHHHTTCCEE
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEECCCCCHHHHHHHHHHHhCCCcee
Confidence 3557778888887 444445555799999998753 232 34566777887664
No 273
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=46.12 E-value=1.2e+02 Score=24.50 Aligned_cols=35 Identities=14% Similarity=0.109 Sum_probs=26.6
Q ss_pred CCcCEEEEecCCCccHHHHHHHHHhhC----CCcEEEEEec
Q 024040 173 GKVDAFIAGIGTGGTVTGAGRFLKEKN----PNIKVYGIEP 209 (273)
Q Consensus 173 ~~~d~iv~p~G~Gg~~~Gi~~~~k~~~----~~~~vigVe~ 209 (273)
++||+||+. +...+.|+..++++.+ .++.|+|.+-
T Consensus 191 ~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vig~d~ 229 (292)
T 3k4h_A 191 QPPTAIMAT--DDLIGLGVLSALSKKGFVVPKDVSIVSFNN 229 (292)
T ss_dssp SCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEESC
T ss_pred CCCcEEEEc--ChHHHHHHHHHHHHhCCCCCCeEEEEEecC
Confidence 468999865 5567779999998876 4577888863
No 274
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=46.03 E-value=74 Score=26.80 Aligned_cols=51 Identities=16% Similarity=0.122 Sum_probs=32.7
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 024040 72 LIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADP 123 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~ 123 (273)
|+..++|..+..++..+- .+-.-.|+++...-..-...++..|++++.++-
T Consensus 85 v~~~~g~~~a~~~~~~~l-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~ 135 (365)
T 3get_A 85 IIIGAGSDQVIEFAIHSK-LNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQS 135 (365)
T ss_dssp EEEESSHHHHHHHHHHHH-CCTTCEEEECSSCCTHHHHHHHHHTCEEEECSS
T ss_pred EEECCCHHHHHHHHHHHH-hCCCCEEEEeCCChHHHHHHHHHcCCEEEEEec
Confidence 777788877877666553 222223445543334556677789999999984
No 275
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=45.98 E-value=50 Score=28.06 Aligned_cols=51 Identities=16% Similarity=0.098 Sum_probs=29.9
Q ss_pred EEeeCCChHHHHHHHHHH-HcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC
Q 024040 72 LIELTSGNTGIGLAFIAA-SRGYKLIIIMPSTYSIERRIILRALGAEVYLADPA 124 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~-~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~ 124 (273)
|+..++|..+..++..+- .-|-++.+.-|.. ..-...++..|++++.++.+
T Consensus 95 v~~~~G~~~al~~~~~~l~~~gd~Vl~~~~~y--~~~~~~~~~~g~~~~~v~~~ 146 (369)
T 3cq5_A 95 LWAANGSNEILQQLLQAFGGPGRTALGFQPSY--SMHPILAKGTHTEFIAVSRG 146 (369)
T ss_dssp EEEESHHHHHHHHHHHHHCSTTCEEEEEESSC--THHHHHHHHTTCEEEEEECC
T ss_pred EEECCChHHHHHHHHHHhcCCCCEEEEcCCCh--HHHHHHHHHcCCEEEEecCC
Confidence 676777777775555443 2232333333332 34455678899999988743
No 276
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=45.76 E-value=80 Score=26.29 Aligned_cols=72 Identities=17% Similarity=0.167 Sum_probs=42.8
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcC-CEEEEeCCC-CChhHHHHHHHHHHHh
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTY-SIERRIILRALG-AEVYLADPA-VGFEGFVKKGEEILNR 140 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~-~~~~~~~~~~~G-a~v~~~~~~-~~~~~~~~~a~~~~~~ 140 (273)
...+||..+|--|.++|..-.+.|.+++++-.... .......++..| .++..+..+ .+.++..+...+..++
T Consensus 42 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 116 (293)
T 3rih_A 42 RSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDA 116 (293)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence 45577778888899999988889998887765422 223344555555 466554432 2333444444444333
No 277
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=45.48 E-value=24 Score=30.44 Aligned_cols=28 Identities=25% Similarity=0.197 Sum_probs=26.1
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 024040 72 LIELTSGNTGIGLAFIAASRGYKLIIIM 99 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~~g~~~~i~~ 99 (273)
|+...+|-.|.++|...++.|++++||=
T Consensus 4 V~IVGaGpaGl~~A~~L~~~G~~v~v~E 31 (412)
T 4hb9_A 4 VGIIGAGIGGTCLAHGLRKHGIKVTIYE 31 (412)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEECcCHHHHHHHHHHHhCCCCEEEEe
Confidence 8888999999999999999999999983
No 278
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=45.47 E-value=83 Score=25.45 Aligned_cols=33 Identities=30% Similarity=0.281 Sum_probs=26.8
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPS 101 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~ 101 (273)
...+|+..+|.-|.++|....+.|.+++++...
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 46 (267)
T 1iy8_A 14 RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVS 46 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 455888888889999999988899988776543
No 279
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=45.42 E-value=55 Score=27.44 Aligned_cols=52 Identities=13% Similarity=0.139 Sum_probs=32.6
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC
Q 024040 72 LIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPA 124 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~ 124 (273)
++..++|..+..++..+- .+-.-.|+++...-..-...++..|++++.++.+
T Consensus 71 i~~~~g~~~a~~~~~~~l-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~ 122 (354)
T 3ly1_A 71 ILLTAGSSEGIRAAIEAY-ASLEAQLVIPELTYGDGEHFAKIAGMKVTKVKML 122 (354)
T ss_dssp EEEESHHHHHHHHHHHHH-CCTTCEEEEESSSCTHHHHHHHHTTCEEEEECCC
T ss_pred EEEeCChHHHHHHHHHHH-hCCCCeEEECCCCchHHHHHHHHcCCEEEEecCC
Confidence 777777777777766654 2221233344333334566778899999999754
No 280
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=45.41 E-value=23 Score=30.21 Aligned_cols=28 Identities=29% Similarity=0.338 Sum_probs=26.1
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 024040 72 LIELTSGNTGIGLAFIAASRGYKLIIIM 99 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~~g~~~~i~~ 99 (273)
|+...+|-.|.++|+..++.|++++|+=
T Consensus 7 ViIVGaGpaGl~~A~~La~~G~~V~v~E 34 (397)
T 3oz2_A 7 VLVVGGGPGGSTAARYAAKYGLKTLMIE 34 (397)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEECcCHHHHHHHHHHHHCCCcEEEEe
Confidence 7888999999999999999999999884
No 281
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=45.40 E-value=35 Score=29.73 Aligned_cols=35 Identities=31% Similarity=0.442 Sum_probs=29.6
Q ss_pred CCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 024040 66 TPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPS 101 (273)
Q Consensus 66 ~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~ 101 (273)
.++.+ |....+|..|+.++.+|+++|++++++-|.
T Consensus 10 ~~~~~-IlIlG~G~lg~~la~aa~~lG~~viv~d~~ 44 (377)
T 3orq_A 10 KFGAT-IGIIGGGQLGKMMAQSAQKMGYKVVVLDPS 44 (377)
T ss_dssp CTTCE-EEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCE-EEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 34444 888899999999999999999999988764
No 282
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=45.39 E-value=1.1e+02 Score=27.69 Aligned_cols=51 Identities=20% Similarity=0.211 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHH-cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 024040 50 RIAYSMIKDAED-KGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPS 101 (273)
Q Consensus 50 R~a~~~~~~a~~-~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~ 101 (273)
||+.+.+..+.+ .|.-..|. +|+....||-|..+|....++|.+++.+...
T Consensus 216 ~Gv~~~~~~~~~~~g~~l~g~-~vaVqGfGnVG~~~a~~L~e~GakvVavsD~ 267 (440)
T 3aog_A 216 RGVFITAAAAAEKIGLQVEGA-RVAIQGFGNVGNAAARAFHDHGARVVAVQDH 267 (440)
T ss_dssp HHHHHHHHHHHHHHTCCSTTC-EEEEECCSHHHHHHHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHHHHhcCCCccCC-EEEEeccCHHHHHHHHHHHHCCCEEEEEEcC
Confidence 577777766554 44422344 4888889999999999988889888766654
No 283
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=45.36 E-value=1.4e+02 Score=26.65 Aligned_cols=51 Identities=22% Similarity=0.139 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHH-cCCCCCCCeEEEeeCCChHHHHHHHHHHH-cCCeEEEEecC
Q 024040 50 RIAYSMIKDAED-KGLITPGKTVLIELTSGNTGIGLAFIAAS-RGYKLIIIMPS 101 (273)
Q Consensus 50 R~a~~~~~~a~~-~g~~~~g~~~vv~~ssGN~g~a~A~~a~~-~g~~~~i~~p~ 101 (273)
||+.+.+..+.+ .|.-..| .+|+....||-|..+|....+ +|.+++.+...
T Consensus 190 ~Gv~~~~~~~~~~~g~~l~g-~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~ 242 (415)
T 2tmg_A 190 RGVKVCAGLAMDVLGIDPKK-ATVAVQGFGNVGQFAALLISQELGSKVVAVSDS 242 (415)
T ss_dssp HHHHHHHHHHHHHTTCCTTT-CEEEEECCSHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred HHHHHHHHHHHHHcCCCcCC-CEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeC
Confidence 678877777654 4542334 448888889999999977777 88887766543
No 284
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=45.32 E-value=68 Score=26.32 Aligned_cols=72 Identities=11% Similarity=0.132 Sum_probs=44.2
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC-------------CCCHHHH----HHHHHcCCEEEEeCCC-CChhHH
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPS-------------TYSIERR----IILRALGAEVYLADPA-VGFEGF 130 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~-------------~~~~~~~----~~~~~~Ga~v~~~~~~-~~~~~~ 130 (273)
...+||..+|--|.++|..-.+.|.+++++-.. .....++ ..++..|.++..+..+ .+.++.
T Consensus 12 k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 91 (286)
T 3uve_A 12 KVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDAL 91 (286)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHHHH
Confidence 456888888889999999999999998876432 1123333 3445567777766533 233344
Q ss_pred HHHHHHHHHh
Q 024040 131 VKKGEEILNR 140 (273)
Q Consensus 131 ~~~a~~~~~~ 140 (273)
.+...+..++
T Consensus 92 ~~~~~~~~~~ 101 (286)
T 3uve_A 92 KAAVDSGVEQ 101 (286)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4444444443
No 285
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=45.28 E-value=49 Score=27.31 Aligned_cols=53 Identities=25% Similarity=0.311 Sum_probs=37.3
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHH---HHcCCEEEEeC
Q 024040 70 TVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS--IERRIIL---RALGAEVYLAD 122 (273)
Q Consensus 70 ~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~--~~~~~~~---~~~Ga~v~~~~ 122 (273)
+.+|+..+|.-|.+++......|.+++++.....+ +.+.+.+ ...|.+++..+
T Consensus 6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D 63 (313)
T 1qyd_A 6 RVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEAS 63 (313)
T ss_dssp CEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCC
T ss_pred EEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCC
Confidence 34788889999999999988889999888765332 4444333 34577666554
No 286
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=45.23 E-value=1.2e+02 Score=24.39 Aligned_cols=71 Identities=11% Similarity=0.039 Sum_probs=41.3
Q ss_pred CeEEEeeCCCh--HHHHHHHHHHHcCCeEEEEecCCCCHHHHHH-HHHcCC---EEEEeCCCCChhHHHHHHHHHHHh
Q 024040 69 KTVLIELTSGN--TGIGLAFIAASRGYKLIIIMPSTYSIERRII-LRALGA---EVYLADPAVGFEGFVKKGEEILNR 140 (273)
Q Consensus 69 ~~~vv~~ssGN--~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~-~~~~Ga---~v~~~~~~~~~~~~~~~a~~~~~~ 140 (273)
...+||..+|. -|.++|....+.|.+++++............ .+.++. .++.++-. +.++..+...++.++
T Consensus 8 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~v~~~~~~~~~~ 84 (266)
T 3oig_A 8 RNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVT-NDAEIETCFASIKEQ 84 (266)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCS-SSHHHHHHHHHHHHH
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCC-CHHHHHHHHHHHHHH
Confidence 45577777776 8999999988899998777654333333333 344443 44444432 234444444444443
No 287
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=45.18 E-value=44 Score=27.86 Aligned_cols=53 Identities=13% Similarity=0.080 Sum_probs=37.4
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-C--CHHHHH---HHHHcCCEEEEeC
Q 024040 70 TVLIELTSGNTGIGLAFIAASRGYKLIIIMPST-Y--SIERRI---ILRALGAEVYLAD 122 (273)
Q Consensus 70 ~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~-~--~~~~~~---~~~~~Ga~v~~~~ 122 (273)
+.+|+..+|+-|.+++......|.+++++.... . .+.+.+ .+...|.+++..+
T Consensus 6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D 64 (321)
T 3c1o_A 6 KIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGE 64 (321)
T ss_dssp CEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECC
T ss_pred EEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEec
Confidence 347888899999999999888899988887653 1 123333 2345677777665
No 288
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=45.12 E-value=1.4e+02 Score=25.36 Aligned_cols=103 Identities=20% Similarity=0.195 Sum_probs=63.6
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCCC
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQF 150 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 150 (273)
+|.....|+.|.++|..++.+|.+++++-+.. .. +..+.+|++. . ++++ +.++. +.+.+.-.
T Consensus 152 ~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~-~~---~~~~~~g~~~--~----~l~~-------~l~~a-DvVil~vp 213 (334)
T 2dbq_A 152 TIGIIGLGRIGQAIAKRAKGFNMRILYYSRTR-KE---EVERELNAEF--K----PLED-------LLRES-DFVVLAVP 213 (334)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC-CH---HHHHHHCCEE--C----CHHH-------HHHHC-SEEEECCC
T ss_pred EEEEEccCHHHHHHHHHHHhCCCEEEEECCCc-ch---hhHhhcCccc--C----CHHH-------HHhhC-CEEEECCC
Confidence 47778899999999999999999987775543 22 2334457642 1 1222 22333 45554332
Q ss_pred CCCcchHhhhhchHHHHHHhhCCCcCEEEEecCCCccHH--HHHHHHHh
Q 024040 151 ENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTGGTVT--GAGRFLKE 197 (273)
Q Consensus 151 ~~~~~~~~g~~t~~~Ei~~q~~~~~d~iv~p~G~Gg~~~--Gi~~~~k~ 197 (273)
.++.. ...+..+++..+ +++.+++-++.|+... .+..+++.
T Consensus 214 ~~~~t----~~~i~~~~~~~m--k~~ailIn~srg~~v~~~aL~~aL~~ 256 (334)
T 2dbq_A 214 LTRET----YHLINEERLKLM--KKTAILINIARGKVVDTNALVKALKE 256 (334)
T ss_dssp CCTTT----TTCBCHHHHHHS--CTTCEEEECSCGGGBCHHHHHHHHHH
T ss_pred CChHH----HHhhCHHHHhcC--CCCcEEEECCCCcccCHHHHHHHHHh
Confidence 22211 122335667777 4678899999988766 56677765
No 289
>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*
Probab=45.00 E-value=1.4e+02 Score=27.26 Aligned_cols=56 Identities=25% Similarity=0.269 Sum_probs=39.6
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC---C--CHHHHHHHHHcCCEEEEeCCC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPST---Y--SIERRIILRALGAEVYLADPA 124 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~---~--~~~~~~~~~~~Ga~v~~~~~~ 124 (273)
.+.+||..+|--|.++|..-.+.|.+.++++... . .......++..|+++..+..+
T Consensus 240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~D 300 (496)
T 3mje_A 240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACD 300 (496)
T ss_dssp SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEcc
Confidence 5668888888899999988888898555554321 1 234566788899999877543
No 290
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=44.97 E-value=1.1e+02 Score=24.36 Aligned_cols=69 Identities=19% Similarity=0.129 Sum_probs=41.6
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHH-HHHcCCEEEEeCCC-CChhHHHHHHHHHHHh
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRII-LRALGAEVYLADPA-VGFEGFVKKGEEILNR 140 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~-~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 140 (273)
...+|+..+|--|.++|....+.|.+++++-.. ..+.+. .+.++.++..+..+ .+.++..+...+..++
T Consensus 10 k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (261)
T 3n74_A 10 KVALITGAGSGFGEGMAKRFAKGGAKVVIVDRD---KAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSK 80 (261)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC---HHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 455788888889999999999999997776543 233332 33456666555433 2233444444444443
No 291
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=44.75 E-value=1.2e+02 Score=24.49 Aligned_cols=71 Identities=18% Similarity=0.087 Sum_probs=40.8
Q ss_pred CeEEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHH-cCC-EEEEeCCCCChhHHHHHHHHHHHh
Q 024040 69 KTVLIELTS--GNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRA-LGA-EVYLADPAVGFEGFVKKGEEILNR 140 (273)
Q Consensus 69 ~~~vv~~ss--GN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~-~Ga-~v~~~~~~~~~~~~~~~a~~~~~~ 140 (273)
...+||..+ |--|.++|....+.|.+++++.........++.+.. .|. .++.++- .+.++..+...+..++
T Consensus 10 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~-~~~~~v~~~~~~~~~~ 84 (265)
T 1qsg_A 10 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDV-AEDASIDTMFAELGKV 84 (265)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCT-TCHHHHHHHHHHHHTT
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccC-CCHHHHHHHHHHHHHH
Confidence 345777766 779999999988899998877654333344555543 332 3334442 2233333344444443
No 292
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=44.58 E-value=75 Score=26.79 Aligned_cols=73 Identities=26% Similarity=0.257 Sum_probs=42.5
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCC--EEEEeCCC-CChhHHHHHHHHHHHhC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS-IERRIILRALGA--EVYLADPA-VGFEGFVKKGEEILNRT 141 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~-~~~~~~~~~~Ga--~v~~~~~~-~~~~~~~~~a~~~~~~~ 141 (273)
.+.+||..+|--|.++|......|.++++....... ......++..|. ++..+..+ .+.++..+...+..++.
T Consensus 9 k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 9 RTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF 85 (319)
T ss_dssp CEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 455888888889999999988999998777654211 112334444554 55544432 22333344444444443
No 293
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=44.56 E-value=53 Score=27.02 Aligned_cols=53 Identities=17% Similarity=0.264 Sum_probs=37.1
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC---CHHHHHH---HHHcCCEEEEeC
Q 024040 70 TVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTY---SIERRII---LRALGAEVYLAD 122 (273)
Q Consensus 70 ~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~---~~~~~~~---~~~~Ga~v~~~~ 122 (273)
+.+|+..+|+-|.+++......|.+++++..... .+.+.+. +...|.+++..+
T Consensus 6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D 64 (308)
T 1qyc_A 6 RILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGS 64 (308)
T ss_dssp CEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCC
T ss_pred EEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEec
Confidence 3478888999999999998889999888876532 1344433 334577666554
No 294
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=44.44 E-value=86 Score=26.01 Aligned_cols=71 Identities=17% Similarity=0.079 Sum_probs=39.8
Q ss_pred CeEEEeeCCC--hHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHH-HHcCC-EEEEeCCCCChhHHHHHHHHHHHh
Q 024040 69 KTVLIELTSG--NTGIGLAFIAASRGYKLIIIMPSTYSIERRIIL-RALGA-EVYLADPAVGFEGFVKKGEEILNR 140 (273)
Q Consensus 69 ~~~vv~~ssG--N~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~-~~~Ga-~v~~~~~~~~~~~~~~~a~~~~~~ 140 (273)
...|||..+| .-|.++|....+.|.+++++-........+..+ +..|. ..+.++- .+.++..+...+..++
T Consensus 31 k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~ 105 (296)
T 3k31_A 31 KKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDV-SDAESVDNMFKVLAEE 105 (296)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCT-TCHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCC-CCHHHHHHHHHHHHHH
Confidence 3457777665 688889988888999987776543333333333 33343 3334443 2334444444444443
No 295
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=44.43 E-value=63 Score=27.32 Aligned_cols=52 Identities=19% Similarity=0.248 Sum_probs=31.5
Q ss_pred EEEeeCCChHHHHHHHHHHH----cCCeEEEEecCCCCHHH-HHHHHHcCCEEEEeCC
Q 024040 71 VLIELTSGNTGIGLAFIAAS----RGYKLIIIMPSTYSIER-RIILRALGAEVYLADP 123 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~----~g~~~~i~~p~~~~~~~-~~~~~~~Ga~v~~~~~ 123 (273)
.++..++|..+..++..+-. -|-+ +++......... ...++..|++++.++.
T Consensus 61 ~v~~~~g~t~al~~~~~~~~~~~~~gd~-vlv~~~~~~~~~~~~~~~~~g~~~~~v~~ 117 (385)
T 2bkw_A 61 PFVLAGSGTLGWDIFASNFILSKAPNKN-VLVVSTGTFSDRFADCLRSYGAQVDVVRP 117 (385)
T ss_dssp EEEEESCTTHHHHHHHHHHSCTTCSCCE-EEEECSSHHHHHHHHHHHHTTCEEEEECC
T ss_pred eEEEcCchHHHHHHHHHHHhccCCCCCe-EEEEcCCcchHHHHHHHHHcCCceEEEec
Confidence 47777888888887776542 2332 233312222222 3567788999999875
No 296
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=44.43 E-value=67 Score=26.14 Aligned_cols=72 Identities=17% Similarity=0.128 Sum_probs=41.4
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHH-cCCEEEEeCCC-CChhHHHHHHHHHHHh
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS-IERRIILRA-LGAEVYLADPA-VGFEGFVKKGEEILNR 140 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~-~~~~~~~~~-~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 140 (273)
...+||..+|--|.++|....+.|.+++++-..... ....+.++. .|.++..+..+ .+.++..+...+..++
T Consensus 21 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 95 (266)
T 4egf_A 21 KRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEA 95 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 455777788888999999988899997776543111 111223333 57777665432 1233444444444433
No 297
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=44.32 E-value=45 Score=29.72 Aligned_cols=44 Identities=14% Similarity=0.184 Sum_probs=33.8
Q ss_pred hHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHH----HHHcCCEEEEeC
Q 024040 79 NTGIGLAFIAASRGYKLIIIMPSTY--SIERRII----LRALGAEVYLAD 122 (273)
Q Consensus 79 N~g~a~A~~a~~~g~~~~i~~p~~~--~~~~~~~----~~~~Ga~v~~~~ 122 (273)
|.+.|++.+++++|++++++.|+.. ++.-+.. .+..|+++..+.
T Consensus 209 nVa~Sli~~~~~lG~~v~~~~P~~~~~~~~~~~~a~~~a~~~G~~i~~~~ 258 (399)
T 3q98_A 209 SVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVT 258 (399)
T ss_dssp HHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred HHHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 7899999999999999999999843 4444333 345788887765
No 298
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=44.30 E-value=1.2e+02 Score=24.93 Aligned_cols=53 Identities=21% Similarity=0.235 Sum_probs=37.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHcCCEEEEeCCC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRI-ILRALGAEVYLADPA 124 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~-~~~~~Ga~v~~~~~~ 124 (273)
...+||..+|--|.++|....+.|.+++++... ..+.+ ..+.++.++..+..+
T Consensus 17 k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~D 70 (291)
T 3rd5_A 17 RTVVITGANSGLGAVTARELARRGATVIMAVRD---TRKGEAAARTMAGQVEVRELD 70 (291)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHTTSSSEEEEEECC
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHhcCCeeEEEcC
Confidence 456888888889999999988899987776543 23333 334457777766543
No 299
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=44.27 E-value=73 Score=25.84 Aligned_cols=72 Identities=17% Similarity=0.112 Sum_probs=41.4
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcC-CEEEEeCCC-CChhHHHHHHHHHHHh
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS-IERRIILRALG-AEVYLADPA-VGFEGFVKKGEEILNR 140 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~-~~~~~~~~~~G-a~v~~~~~~-~~~~~~~~~a~~~~~~ 140 (273)
...+||..+|--|.++|....+.|.+++++-..... ......++..| .++..+..+ .+.++..+...+..++
T Consensus 11 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 85 (262)
T 3pk0_A 11 RSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEE 85 (262)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 455777778888999999888899988776543211 11233455555 566555432 2233344444444443
No 300
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=44.21 E-value=1.3e+02 Score=24.47 Aligned_cols=46 Identities=11% Similarity=0.177 Sum_probs=32.5
Q ss_pred chHHHHHHhhCCCcCEEEEecCCCccHHHHHHHHHhhC-----CCcEEEEEecC
Q 024040 162 TTGPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKN-----PNIKVYGIEPS 210 (273)
Q Consensus 162 t~~~Ei~~q~~~~~d~iv~p~G~Gg~~~Gi~~~~k~~~-----~~~~vigVe~~ 210 (273)
....+++++- +++|+||+. +...+.|+..++++.+ .++.|+|.+..
T Consensus 177 ~~~~~~l~~~-~~~~ai~~~--~d~~A~g~~~al~~~g~~vP~~dv~vig~D~~ 227 (297)
T 3rot_A 177 SRVKSYFKIH-PETNIIFCL--TSQALDPLGQMLLHPDRYDFNYQPQVYSFDKT 227 (297)
T ss_dssp HHHHHHHHHC-TTCCEEEES--SHHHHHHHHHHHHSHHHHTCCCCCEEEEECCC
T ss_pred HHHHHHHHhC-CCCCEEEEc--CCcchHHHHHHHHhcCCccCCCceEEEEeCCC
Confidence 3444555553 578999875 4567789999998875 37889998653
No 301
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=44.20 E-value=86 Score=25.76 Aligned_cols=72 Identities=15% Similarity=0.110 Sum_probs=41.3
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHc-CCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS-IERRIILRAL-GAEVYLADPAV-GFEGFVKKGEEILNR 140 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~-~~~~~~~~~~-Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 140 (273)
.+.+|+..+|.-|.++|....+.|.+++++...... ....+.++.. |.++..+..+- +.++..+...+..++
T Consensus 27 k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 101 (302)
T 1w6u_A 27 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV 101 (302)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 345888888999999999999999997776543211 1112223222 76666554332 233333334444333
No 302
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=44.17 E-value=1.6e+02 Score=25.44 Aligned_cols=92 Identities=14% Similarity=0.098 Sum_probs=51.8
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCCC
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQF 150 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 150 (273)
+|....-|+.|.++|..++.+|++++++-+.... ..++. .+. +. .++.++. +...+.-.
T Consensus 173 tiGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~--------~~~~~--~~~---sl-------~ell~~a-DvVil~vP 231 (340)
T 4dgs_A 173 RIGVLGLGQIGRALASRAEAFGMSVRYWNRSTLS--------GVDWI--AHQ---SP-------VDLARDS-DVLAVCVA 231 (340)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCT--------TSCCE--ECS---SH-------HHHHHTC-SEEEECC-
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEcCCccc--------ccCce--ecC---CH-------HHHHhcC-CEEEEeCC
Confidence 4777888999999999999999998777554322 12322 111 12 2334443 45544322
Q ss_pred CCCcchHhhhhchHHHHHHhhCCCcCEEEEecCCCccHH
Q 024040 151 ENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTGGTVT 189 (273)
Q Consensus 151 ~~~~~~~~g~~t~~~Ei~~q~~~~~d~iv~p~G~Gg~~~ 189 (273)
.++. -...+..++++.+ +++.+++-++.|+..-
T Consensus 232 ~t~~----t~~li~~~~l~~m--k~gailIN~aRG~vvd 264 (340)
T 4dgs_A 232 ASAA----TQNIVDASLLQAL--GPEGIVVNVARGNVVD 264 (340)
T ss_dssp -------------CHHHHHHT--TTTCEEEECSCC----
T ss_pred CCHH----HHHHhhHHHHhcC--CCCCEEEECCCCcccC
Confidence 2222 1233456778887 4788999999998763
No 303
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=44.16 E-value=87 Score=25.01 Aligned_cols=73 Identities=15% Similarity=0.146 Sum_probs=42.8
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH-HHHHHH-HHcCCEEEEeCCC-CChhHHHHHHHHHHHhC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSI-ERRIIL-RALGAEVYLADPA-VGFEGFVKKGEEILNRT 141 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~-~~~~~~-~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 141 (273)
.+.+|+..+|.-|.++|....+.|.+++++....... ...+.+ +.++.++..+..+ .+.++..+...+..++.
T Consensus 15 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 90 (265)
T 1h5q_A 15 KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL 90 (265)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhc
Confidence 3458888889999999999888999888776533222 223333 2346666555432 22333333444444433
No 304
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=44.11 E-value=55 Score=28.28 Aligned_cols=45 Identities=16% Similarity=0.025 Sum_probs=33.5
Q ss_pred ChHHHHHHHHHHHcCCeEEEEecCCC----CHHHHHHHHH------cCCEEEEeC
Q 024040 78 GNTGIGLAFIAASRGYKLIIIMPSTY----SIERRIILRA------LGAEVYLAD 122 (273)
Q Consensus 78 GN~g~a~A~~a~~~g~~~~i~~p~~~----~~~~~~~~~~------~Ga~v~~~~ 122 (273)
.|.+.|++.+++++|++++++.|+.- ++.-++.++. .|+++..+.
T Consensus 172 ~~va~Sl~~~~~~~G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v~~~~ 226 (328)
T 3grf_A 172 NNVTYDLMRGCALLGMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFH 226 (328)
T ss_dssp SHHHHHHHHHHHHHTCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEES
T ss_pred cchHHHHHHHHHHcCCEEEEECChHhhhCCCHHHHHHHHHHHhhccCCCeEEEEc
Confidence 58999999999999999999999853 2333333332 688887775
No 305
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=44.04 E-value=78 Score=25.79 Aligned_cols=72 Identities=17% Similarity=0.181 Sum_probs=44.2
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC---------CCHHH----HHHHHHcCCEEEEeCCCC-ChhHHHHHH
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPST---------YSIER----RIILRALGAEVYLADPAV-GFEGFVKKG 134 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~---------~~~~~----~~~~~~~Ga~v~~~~~~~-~~~~~~~~a 134 (273)
...+||..+|--|.++|..-...|.+++++-... ....+ ...++..|.++..+..+- +.++..+..
T Consensus 11 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 90 (287)
T 3pxx_A 11 KVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSREL 90 (287)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHH
Confidence 4558888888899999999889999987765431 01222 234556788777665432 233444444
Q ss_pred HHHHHh
Q 024040 135 EEILNR 140 (273)
Q Consensus 135 ~~~~~~ 140 (273)
.+..++
T Consensus 91 ~~~~~~ 96 (287)
T 3pxx_A 91 ANAVAE 96 (287)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444443
No 306
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=43.86 E-value=1.5e+02 Score=25.27 Aligned_cols=104 Identities=15% Similarity=0.128 Sum_probs=64.7
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCCC
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQF 150 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 150 (273)
+|....-|+.|.++|..++.+|++++.+-+...... ....+|++. + +.+ ++.++. +...++--
T Consensus 147 tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~---~~~~~g~~~--~----~l~-------ell~~a-DvV~l~~P 209 (330)
T 4e5n_A 147 TVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQ---TEQRLGLRQ--V----ACS-------ELFASS-DFILLALP 209 (330)
T ss_dssp EEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHH---HHHHHTEEE--C----CHH-------HHHHHC-SEEEECCC
T ss_pred EEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHh---HHHhcCcee--C----CHH-------HHHhhC-CEEEEcCC
Confidence 477888999999999999999999887765432332 233456532 1 122 233443 45555333
Q ss_pred CCCcchHhhhhchHHHHHHhhCCCcCEEEEecCCCccH--HHHHHHHHh
Q 024040 151 ENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTGGTV--TGAGRFLKE 197 (273)
Q Consensus 151 ~~~~~~~~g~~t~~~Ei~~q~~~~~d~iv~p~G~Gg~~--~Gi~~~~k~ 197 (273)
.++.. ...+..+.+..+ +++.+++-+|.|+.. ..+..+++.
T Consensus 210 ~t~~t----~~li~~~~l~~m--k~gailIN~arg~~vd~~aL~~aL~~ 252 (330)
T 4e5n_A 210 LNADT----LHLVNAELLALV--RPGALLVNPCRGSVVDEAAVLAALER 252 (330)
T ss_dssp CSTTT----TTCBCHHHHTTS--CTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred CCHHH----HHHhCHHHHhhC--CCCcEEEECCCCchhCHHHHHHHHHh
Confidence 23322 234556777777 578999999999865 344445544
No 307
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=43.66 E-value=31 Score=26.08 Aligned_cols=31 Identities=23% Similarity=0.429 Sum_probs=27.8
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMPS 101 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~ 101 (273)
.++...+|..|..+|...++.|.+++++-+.
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~ 33 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGG 33 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECS
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 3788899999999999999999999998764
No 308
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=43.66 E-value=76 Score=26.04 Aligned_cols=32 Identities=19% Similarity=0.131 Sum_probs=26.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMP 100 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p 100 (273)
...+||..+|.-|.++|....+.|.+++++..
T Consensus 30 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r 61 (276)
T 2b4q_A 30 RIALVTGGSRGIGQMIAQGLLEAGARVFICAR 61 (276)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 35588888899999999999899998777644
No 309
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=43.64 E-value=1.6e+02 Score=25.51 Aligned_cols=108 Identities=15% Similarity=0.176 Sum_probs=65.7
Q ss_pred CCCeEEEeeCCChHHHHHHHHHHHcCCe-EEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeE
Q 024040 67 PGKTVLIELTSGNTGIGLAFIAASRGYK-LIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGY 145 (273)
Q Consensus 67 ~g~~~vv~~ssGN~g~a~A~~a~~~g~~-~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~ 145 (273)
.|.+ |.....||.|.++|..++.+|++ ++++-+...+.. ..+.+|++. +. +.+ ++.++. +..
T Consensus 163 ~g~t-vgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~---~~~~~g~~~--~~---~l~-------ell~~a-DvV 225 (364)
T 2j6i_A 163 EGKT-IATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKD---AEEKVGARR--VE---NIE-------ELVAQA-DIV 225 (364)
T ss_dssp TTCE-EEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHH---HHHHTTEEE--CS---SHH-------HHHHTC-SEE
T ss_pred CCCE-EEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchh---HHHhcCcEe--cC---CHH-------HHHhcC-CEE
Confidence 3444 77788999999999999999997 877654433332 344567552 21 122 233333 555
Q ss_pred eeCCCCCCcchHhhhhchHHHHHHhhCCCcCEEEEecCCCccH--HHHHHHHHh
Q 024040 146 ILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTGGTV--TGAGRFLKE 197 (273)
Q Consensus 146 ~~~~~~~~~~~~~g~~t~~~Ei~~q~~~~~d~iv~p~G~Gg~~--~Gi~~~~k~ 197 (273)
.++--.++.. ...+..+.+.++ +++.+++-+|.|+.+ ..+..+++.
T Consensus 226 ~l~~P~t~~t----~~li~~~~l~~m--k~ga~lIn~arG~~vd~~aL~~aL~~ 273 (364)
T 2j6i_A 226 TVNAPLHAGT----KGLINKELLSKF--KKGAWLVNTARGAICVAEDVAAALES 273 (364)
T ss_dssp EECCCCSTTT----TTCBCHHHHTTS--CTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred EECCCCChHH----HHHhCHHHHhhC--CCCCEEEECCCCchhCHHHHHHHHHc
Confidence 5433222221 223445677777 478999999999864 345555554
No 310
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=43.52 E-value=1.1e+02 Score=24.63 Aligned_cols=54 Identities=20% Similarity=0.205 Sum_probs=34.4
Q ss_pred CeEEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHH-cC-CEEEEeC
Q 024040 69 KTVLIELTS--GNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRA-LG-AEVYLAD 122 (273)
Q Consensus 69 ~~~vv~~ss--GN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~-~G-a~v~~~~ 122 (273)
...+||..+ |.-|.++|....+.|.+++++..........+.+.. .| ...+.++
T Consensus 9 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D 66 (261)
T 2wyu_A 9 KKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRAD 66 (261)
T ss_dssp CEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECC
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECC
Confidence 345777766 789999999988889998777654322334444443 34 3444444
No 311
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=43.49 E-value=27 Score=29.06 Aligned_cols=29 Identities=7% Similarity=0.191 Sum_probs=25.9
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIM 99 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~ 99 (273)
.|+.-.+|-.|.+.|.++++.|+++++|=
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g~~v~lie 36 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRARKQIALFD 36 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEe
Confidence 37888999999999999999999999883
No 312
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=43.46 E-value=69 Score=26.59 Aligned_cols=43 Identities=23% Similarity=0.155 Sum_probs=33.9
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCE
Q 024040 72 LIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAE 117 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~ 117 (273)
|.....|+.|.++|......|.+++++- .++.+.+.+...|.+
T Consensus 6 I~iiG~G~mG~~~a~~l~~~G~~V~~~d---~~~~~~~~~~~~g~~ 48 (302)
T 2h78_A 6 IAFIGLGHMGAPMATNLLKAGYLLNVFD---LVQSAVDGLVAAGAS 48 (302)
T ss_dssp EEEECCSTTHHHHHHHHHHTTCEEEEEC---SSHHHHHHHHHTTCE
T ss_pred EEEEeecHHHHHHHHHHHhCCCeEEEEc---CCHHHHHHHHHCCCe
Confidence 6667899999999999999999988873 345677776666654
No 313
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=43.43 E-value=1.5e+02 Score=24.97 Aligned_cols=118 Identities=17% Similarity=0.169 Sum_probs=68.2
Q ss_pred EEeeCCChHHHHHHHHHHHcC----CeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEee
Q 024040 72 LIELTSGNTGIGLAFIAASRG----YKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYIL 147 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~~g----~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 147 (273)
|.....||.|.++|..-.+.| .+++++-+. ....+.+.++.+|.++. . +.. +..++- +.+++
T Consensus 25 I~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~-~~~~~~~~l~~~G~~~~--~---~~~-------e~~~~a-DvVil 90 (322)
T 2izz_A 25 VGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPD-MDLATVSALRKMGVKLT--P---HNK-------ETVQHS-DVLFL 90 (322)
T ss_dssp EEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSC-TTSHHHHHHHHHTCEEE--S---CHH-------HHHHHC-SEEEE
T ss_pred EEEECCCHHHHHHHHHHHHCCCCCcceEEEECCC-ccHHHHHHHHHcCCEEe--C---ChH-------HHhccC-CEEEE
Confidence 666788999999999988888 577766443 22135666667787642 2 111 122333 45554
Q ss_pred CCCCCCcchHhhhhchHHHHHHhhCCCcCEEEEecCCCccHHHHHHHHHhhCCCcEEEEEecCC
Q 024040 148 GQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSE 211 (273)
Q Consensus 148 ~~~~~~~~~~~g~~t~~~Ei~~q~~~~~d~iv~p~G~Gg~~~Gi~~~~k~~~~~~~vigVe~~~ 211 (273)
--. +. ....+..+|...+ .++.+|+.+.+|....-+...+....+..+++..-|..
T Consensus 91 av~--~~----~~~~vl~~l~~~l--~~~~ivvs~s~gi~~~~l~~~l~~~~~~~~vv~~~p~~ 146 (322)
T 2izz_A 91 AVK--PH----IIPFILDEIGADI--EDRHIVVSCAAGVTISSIEKKLSAFRPAPRVIRCMTNT 146 (322)
T ss_dssp CSC--GG----GHHHHHHHHGGGC--CTTCEEEECCTTCCHHHHHHHHHTTSSCCEEEEEECCG
T ss_pred EeC--HH----HHHHHHHHHHhhc--CCCCEEEEeCCCCCHHHHHHHHhhcCCCCeEEEEeCCc
Confidence 221 11 2233344554443 35778888877766655555555444556788776643
No 314
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=43.27 E-value=1e+02 Score=25.60 Aligned_cols=70 Identities=11% Similarity=0.118 Sum_probs=44.5
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHH-HHHHHcCCEEEEeCCC-CChhHHHHHHHHHHHhC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERR-IILRALGAEVYLADPA-VGFEGFVKKGEEILNRT 141 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~-~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 141 (273)
+..|||.+++--|+++|..-.+.|.++++.-.. ..++ +..+.+|.+++.+..+ .+.++..+...+..++.
T Consensus 30 KvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~---~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 101 (273)
T 4fgs_A 30 KIAVITGATSGIGLAAAKRFVAEGARVFITGRR---KDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEA 101 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHc
Confidence 455888888889999999999999998776432 3333 3345567766655432 23444444455554444
No 315
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=43.24 E-value=1.2e+02 Score=24.72 Aligned_cols=68 Identities=9% Similarity=0.105 Sum_probs=41.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHcCCEEEEeCCC-CChhHHHHHHHHHHH
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRI-ILRALGAEVYLADPA-VGFEGFVKKGEEILN 139 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~-~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~ 139 (273)
...+||..+|--|.++|..-.+.|.+++++-.. ..+.+ ..+.+|.++..+..+ .+.++..+...+..+
T Consensus 28 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 97 (277)
T 4dqx_A 28 RVCIVTGGGSGIGRATAELFAKNGAYVVVADVN---EDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTA 97 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 355888888889999999988899988776543 23322 333457666655432 223333333444433
No 316
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=43.20 E-value=1.1e+02 Score=24.52 Aligned_cols=51 Identities=24% Similarity=0.202 Sum_probs=34.3
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHH-HHHcCCEEEEeC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRII-LRALGAEVYLAD 122 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~-~~~~Ga~v~~~~ 122 (273)
...+|+..+|--|.++|....+.|.+++++... ..+.+. .+.+|.++..+.
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~ 57 (254)
T 1hdc_A 6 KTVIITGGARGLGAEAARQAVAAGARVVLADVL---DEEGAATARELGDAARYQH 57 (254)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHTTGGGEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhCCceeEEE
Confidence 455888888889999999999999998776543 233333 233455555443
No 317
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=43.02 E-value=72 Score=26.82 Aligned_cols=72 Identities=18% Similarity=0.159 Sum_probs=44.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC---------CCHHH----HHHHHHcCCEEEEeCCCC-ChhHHHHHH
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPST---------YSIER----RIILRALGAEVYLADPAV-GFEGFVKKG 134 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~---------~~~~~----~~~~~~~Ga~v~~~~~~~-~~~~~~~~a 134 (273)
...+||..+|--|.++|..-.+.|.+++++-... ....+ ...++..|.++..+..+- +.++..+..
T Consensus 47 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~ 126 (317)
T 3oec_A 47 KVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAVV 126 (317)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHH
Confidence 4557888888899999999888999988874321 11232 344566788887665432 233334444
Q ss_pred HHHHHh
Q 024040 135 EEILNR 140 (273)
Q Consensus 135 ~~~~~~ 140 (273)
.+..++
T Consensus 127 ~~~~~~ 132 (317)
T 3oec_A 127 DEALAE 132 (317)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444333
No 318
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=42.83 E-value=47 Score=29.80 Aligned_cols=44 Identities=14% Similarity=0.263 Sum_probs=33.7
Q ss_pred hHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHH----HHHcCCEEEEeC
Q 024040 79 NTGIGLAFIAASRGYKLIIIMPSTY--SIERRII----LRALGAEVYLAD 122 (273)
Q Consensus 79 N~g~a~A~~a~~~g~~~~i~~p~~~--~~~~~~~----~~~~Ga~v~~~~ 122 (273)
|.+.|++.+++++|++++++.|+.- .+.-++. .+..|+++..+.
T Consensus 206 nVa~Sli~~l~~lG~~v~l~~P~~~~~~p~~~~~a~~~a~~~G~~v~~~~ 255 (418)
T 2yfk_A 206 SVPQGIVGLMTRLGMDVVLAHPEGYEIMPEVEEVAKKNAAEFGGNFTKTN 255 (418)
T ss_dssp HHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHSSEEEEES
T ss_pred hHHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 5999999999999999999999854 4443333 345788877764
No 319
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=42.77 E-value=75 Score=24.59 Aligned_cols=49 Identities=10% Similarity=0.173 Sum_probs=37.2
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLAD 122 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~ 122 (273)
.+|+..+|.-|.+++......|.+++++... ..+...+...+.+++..+
T Consensus 3 ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~---~~~~~~~~~~~~~~~~~D 51 (224)
T 3h2s_A 3 IAVLGATGRAGSAIVAEARRRGHEVLAVVRD---PQKAADRLGATVATLVKE 51 (224)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHTCTTSEEEECC
T ss_pred EEEEcCCCHHHHHHHHHHHHCCCEEEEEEec---ccccccccCCCceEEecc
Confidence 4788889999999999998999999988764 345554444567776655
No 320
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=42.74 E-value=94 Score=25.42 Aligned_cols=52 Identities=25% Similarity=0.282 Sum_probs=38.3
Q ss_pred eEEEeeCCChHHHHHHHHHHHcC-CeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 024040 70 TVLIELTSGNTGIGLAFIAASRG-YKLIIIMPSTYSIERRIILRALGAEVYLAD 122 (273)
Q Consensus 70 ~~vv~~ssGN~g~a~A~~a~~~g-~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~ 122 (273)
+.+|+..+|+.|.+++......| .+++++...... .+...+...|.+++..+
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~-~~~~~l~~~~~~~~~~D 59 (299)
T 2wm3_A 7 LVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRK-KAAKELRLQGAEVVQGD 59 (299)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTS-HHHHHHHHTTCEEEECC
T ss_pred EEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCC-HHHHHHHHCCCEEEEec
Confidence 45888889999999999887778 898888765332 23344556788887765
No 321
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=42.60 E-value=66 Score=26.35 Aligned_cols=72 Identities=17% Similarity=0.045 Sum_probs=40.9
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHHh
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS-IERRIILRALGAEVYLADPA-VGFEGFVKKGEEILNR 140 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~-~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 140 (273)
...+||..+|--|.++|....+.|.+++++-..... ......++..|.++..+..+ .+.++..+...+..++
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 102 (270)
T 3ftp_A 29 QVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKE 102 (270)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence 345777777888899998888899988776553211 12233455556655444322 2333334444444333
No 322
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=42.58 E-value=1.6e+02 Score=27.05 Aligned_cols=123 Identities=13% Similarity=0.073 Sum_probs=69.6
Q ss_pred HHHHHHHcCCeEEE---------EecCCC--CHHHHHHHHHcCCEEEEeCCCC---Ch-hHHHHHHHHHHHhCCCeEe-e
Q 024040 84 LAFIAASRGYKLII---------IMPSTY--SIERRIILRALGAEVYLADPAV---GF-EGFVKKGEEILNRTPNGYI-L 147 (273)
Q Consensus 84 ~A~~a~~~g~~~~i---------~~p~~~--~~~~~~~~~~~Ga~v~~~~~~~---~~-~~~~~~a~~~~~~~~~~~~-~ 147 (273)
+..+|+..|.++.+ ..|.-+ ........-..|++.+...++. .| .++.+...+.+.+.+..++ -
T Consensus 283 ii~aaraaGkpvi~ATQMLeSMi~~~~ptraEvsdva~av~~G~d~vmLs~eta~G~yPveaV~~m~~I~~~aE~~~~~~ 362 (500)
T 1a3w_A 283 LIAKSNLAGKPVICATQMLESMTYNPRPTRAEVSDVGNAILDGADCVMLSGETAKGNYPINAVTTMAETAVIAEQAIAYL 362 (500)
T ss_dssp HHHHHHHHTCCEEECSSTTGGGGSCSSCCHHHHHHHHHHHHHTCSEECBSTTTTTCSCHHHHHHHHHHHHHHHTTSCCHH
T ss_pred HHHHHHhcCCCEEEEeehhhhhccCCCchHHHHHHHHHHHHhCCCEEEecchhhcchhHHHHHHHHHHHHHHhhhhhhhh
Confidence 55678999999774 223221 1113444445799999886542 23 3555555555443322221 1
Q ss_pred ------CC-CCCCcchHhhhhchHHHHHHhhCCCcCEEEEecCCCccHHHHHHHHHhhCCCcEEEEEecCCC
Q 024040 148 ------GQ-FENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSES 212 (273)
Q Consensus 148 ------~~-~~~~~~~~~g~~t~~~Ei~~q~~~~~d~iv~p~G~Gg~~~Gi~~~~k~~~~~~~vigVe~~~~ 212 (273)
.. ...+......-...+.++.++++ ..+||+..-+|.++- .+....|.+.|+++.|...
T Consensus 363 ~~~~~~~~~~~~~~~~~~aia~aa~~~a~~~~--a~aIv~~T~sG~ta~----~isr~RP~~pI~a~t~~~~ 428 (500)
T 1a3w_A 363 PNYDDMRNCTPKPTSTTETVAASAVAAVFEQK--AKAIIVLSTSGTTPR----LVSKYRPNCPIILVTRCPR 428 (500)
T ss_dssp HHHHHHTTSCCSSCCHHHHHHHHHHHHHHHHT--CSCEEEECSSSHHHH----HHHHTCCSSCEEEEESCTT
T ss_pred hHHHhhhhccccccchHHHHHHHHHHHHHhcC--CCEEEEECCCchHHH----HHHhhCCCCCEEEEcCCHH
Confidence 00 01111221223334556777773 568999999988764 4445579999999998764
No 323
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=42.44 E-value=1.1e+02 Score=24.63 Aligned_cols=69 Identities=9% Similarity=0.079 Sum_probs=41.5
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHH-HHcCCEEEEeCCC-CChhHHHHHHHHHHHh
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIIL-RALGAEVYLADPA-VGFEGFVKKGEEILNR 140 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~-~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 140 (273)
...+||..+|--|.++|..-.+.|.+++++-.. ..+++.+ +.+|.++..+..+ .+.++..+...+..++
T Consensus 9 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (255)
T 4eso_A 9 KKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRN---ESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQT 79 (255)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHH
Confidence 455888888889999999988999987776543 3333332 3346666555432 2333333344444333
No 324
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=42.04 E-value=24 Score=29.26 Aligned_cols=29 Identities=14% Similarity=0.132 Sum_probs=26.0
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIM 99 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~ 99 (273)
.|+.-.+|-.|.+.|..++++|+++++|=
T Consensus 6 DvvIIG~GpAGl~AA~~la~~g~~v~liE 34 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGRSSLKPVMYE 34 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCCEEEC
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEe
Confidence 37888999999999999999999998873
No 325
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=42.03 E-value=1.6e+02 Score=24.87 Aligned_cols=55 Identities=18% Similarity=0.066 Sum_probs=37.8
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC--CCCHHHHHH----HHHcCCEEEEeCC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPS--TYSIERRII----LRALGAEVYLADP 123 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~--~~~~~~~~~----~~~~Ga~v~~~~~ 123 (273)
...+||..+|--|.++|......|.++++.+.. .....+++. ++..|.++..+..
T Consensus 6 k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~ 66 (324)
T 3u9l_A 6 KIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLEL 66 (324)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEe
Confidence 345788888889999999999999998887654 233444433 3445766665543
No 326
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=42.03 E-value=1.2e+02 Score=24.99 Aligned_cols=55 Identities=13% Similarity=0.013 Sum_probs=35.7
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHH-----cCCEEEEeCC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS-IERRIILRA-----LGAEVYLADP 123 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~-~~~~~~~~~-----~Ga~v~~~~~ 123 (273)
.+.+|+..+|--|.++|....+.|.+++++...... ....+.++. .+.++..+..
T Consensus 19 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 79 (303)
T 1yxm_A 19 QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQC 79 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEec
Confidence 455888888999999999998999987776543111 111223333 4667766543
No 327
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=41.97 E-value=94 Score=25.33 Aligned_cols=72 Identities=15% Similarity=0.126 Sum_probs=44.4
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC----------CCHHH----HHHHHHcCCEEEEeCCC-CChhHHHHH
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPST----------YSIER----RIILRALGAEVYLADPA-VGFEGFVKK 133 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~----------~~~~~----~~~~~~~Ga~v~~~~~~-~~~~~~~~~ 133 (273)
...+||..+|--|.++|..-.+.|.+++++-... ....+ .+.++..|.++..+..+ .+.++..+.
T Consensus 12 k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~ 91 (277)
T 3tsc_A 12 RVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRKV 91 (277)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence 4558888888899999999889999988774311 12333 33455677777765433 233444444
Q ss_pred HHHHHHh
Q 024040 134 GEEILNR 140 (273)
Q Consensus 134 a~~~~~~ 140 (273)
..+..++
T Consensus 92 ~~~~~~~ 98 (277)
T 3tsc_A 92 VDDGVAA 98 (277)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444443
No 328
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=41.89 E-value=88 Score=27.95 Aligned_cols=51 Identities=31% Similarity=0.311 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHH-cCCC-CCCCeEEEeeCCChHHHHHHHHHHH-cCCeEEEEecC
Q 024040 50 RIAYSMIKDAED-KGLI-TPGKTVLIELTSGNTGIGLAFIAAS-RGYKLIIIMPS 101 (273)
Q Consensus 50 R~a~~~~~~a~~-~g~~-~~g~~~vv~~ssGN~g~a~A~~a~~-~g~~~~i~~p~ 101 (273)
|++.+.+..+.+ .|.- ..|. +|.....||-|..+|..++. +|.+++.+.+.
T Consensus 192 ~Gv~~~~~~~~~~~G~~~l~gk-tvgI~G~G~VG~~vA~~l~~~~G~kVv~~sD~ 245 (419)
T 1gtm_A 192 RGASYTIREAAKVLGWDTLKGK-TIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDS 245 (419)
T ss_dssp HHHHHHHHHHHHHTTCSCSTTC-EEEEECCSHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred hHHHHHHHHHHHHhCCcccCCC-EEEEEcCCHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 677777776654 4543 3444 48888999999999999999 99998877644
No 329
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=41.88 E-value=59 Score=26.75 Aligned_cols=32 Identities=25% Similarity=0.384 Sum_probs=23.9
Q ss_pred eEEEeeCCChHH---HHHHHHHHHcCCeEEEEecC
Q 024040 70 TVLIELTSGNTG---IGLAFIAASRGYKLIIIMPS 101 (273)
Q Consensus 70 ~~vv~~ssGN~g---~a~A~~a~~~g~~~~i~~p~ 101 (273)
+.+|.+..||.| ..+|...++.|.++.++++.
T Consensus 60 ~v~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~ 94 (246)
T 1jzt_A 60 HVFVIAGPGNNGGDGLVCARHLKLFGYNPVVFYPK 94 (246)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCCEEEECCC
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEcC
Confidence 457778888877 55566666679999999864
No 330
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=41.82 E-value=1.3e+02 Score=24.39 Aligned_cols=52 Identities=13% Similarity=0.187 Sum_probs=34.5
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHcCCEEEEeCC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRI-ILRALGAEVYLADP 123 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~-~~~~~Ga~v~~~~~ 123 (273)
...+|+..+|--|.++|..-.+.|.+++++-.. ..+.+ ..+.++.++..+..
T Consensus 31 k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~---~~~~~~~~~~~~~~~~~~~~ 83 (281)
T 3ppi_A 31 ASAIVSGGAGGLGEATVRRLHADGLGVVIADLA---AEKGKALADELGNRAEFVST 83 (281)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHCTTEEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC---hHHHHHHHHHhCCceEEEEc
Confidence 345788888889999999988899987776543 33333 23345666655543
No 331
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=41.68 E-value=1.3e+02 Score=24.03 Aligned_cols=70 Identities=17% Similarity=0.161 Sum_probs=42.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHH-HHHHHcCCEEEEeCCC-CChhHHHHHHHHHHHhC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERR-IILRALGAEVYLADPA-VGFEGFVKKGEEILNRT 141 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~-~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~~ 141 (273)
...+||..+|--|.++|....+.|.+++++-.. ..+. +..+.++.++..+..+ .+.++..+...+..++.
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 80 (259)
T 4e6p_A 9 KSALITGSARGIGRAFAEAYVREGATVAIADID---IERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHA 80 (259)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHc
Confidence 455888888889999999988999997776542 2332 2334456555554432 23334444444444443
No 332
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=41.59 E-value=30 Score=28.77 Aligned_cols=28 Identities=21% Similarity=0.343 Sum_probs=25.8
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEE
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIII 98 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~ 98 (273)
.|+.-.+|-.|.+.|..++++|+++++|
T Consensus 8 DvvIIG~GpAGl~aA~~l~~~g~~V~li 35 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASRANLKTVMI 35 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEE
Confidence 3788899999999999999999999988
No 333
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=41.58 E-value=67 Score=28.09 Aligned_cols=52 Identities=17% Similarity=0.198 Sum_probs=39.0
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC------CCH----HHHHHHHHcCCEEEE
Q 024040 68 GKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPST------YSI----ERRIILRALGAEVYL 120 (273)
Q Consensus 68 g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~------~~~----~~~~~~~~~Ga~v~~ 120 (273)
+.+ ++...+|+.|.-+|...+++|.+++++.+.. .++ .-.+.++..|.+++.
T Consensus 145 ~~~-vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~ 206 (408)
T 2gqw_A 145 QSR-LLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRF 206 (408)
T ss_dssp TCE-EEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCe-EEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccccCHHHHHHHHHHHHHcCcEEEe
Confidence 344 8888999999999999999999999997643 122 224456778887764
No 334
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=41.51 E-value=29 Score=27.73 Aligned_cols=30 Identities=23% Similarity=0.408 Sum_probs=27.3
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 024040 72 LIELTSGNTGIGLAFIAASRGYKLIIIMPS 101 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~ 101 (273)
|+...+|..|..+|...++.|++++++-..
T Consensus 6 VvVVGgG~aGl~aA~~la~~g~~v~lie~~ 35 (232)
T 2cul_A 6 VLIVGAGFSGAETAFWLAQKGVRVGLLTQS 35 (232)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred EEEECcCHHHHHHHHHHHHCCCCEEEEecC
Confidence 888899999999999999999999998654
No 335
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=41.28 E-value=25 Score=30.01 Aligned_cols=57 Identities=19% Similarity=0.091 Sum_probs=40.1
Q ss_pred cCCCCCCCeEEEeeCC---ChHHHHHHHHHHHc-CCeEEEEecCCC-CHHHHHHHHHcCCEEEEeC
Q 024040 62 KGLITPGKTVLIELTS---GNTGIGLAFIAASR-GYKLIIIMPSTY-SIERRIILRALGAEVYLAD 122 (273)
Q Consensus 62 ~g~~~~g~~~vv~~ss---GN~g~a~A~~a~~~-g~~~~i~~p~~~-~~~~~~~~~~~Ga~v~~~~ 122 (273)
.|.+. |.+ |+-... +|.+.|++.+++++ |++++++.|+.- ++..+ ++..|+++..+.
T Consensus 144 ~g~l~-gl~-va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~--~~~~g~~~~~~~ 205 (299)
T 1pg5_A 144 FNTID-GLV-FALLGDLKYARTVNSLLRILTRFRPKLVYLISPQLLRARKEI--LDELNYPVKEVE 205 (299)
T ss_dssp HSCST-TCE-EEEEECCSSCHHHHHHHHHGGGSCCSEEEEECCGGGCCCHHH--HTTCCSCEEEES
T ss_pred hCCcC-CcE-EEEECCCCCCchHHHHHHHHHhCCCCEEEEECCchhcCCHHH--HHHcCCeEEEeC
Confidence 45443 334 444444 79999999999999 999999999854 22332 567888877665
No 336
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=41.17 E-value=43 Score=28.29 Aligned_cols=52 Identities=19% Similarity=-0.017 Sum_probs=33.6
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC
Q 024040 72 LIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPA 124 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~ 124 (273)
++..++|..+..++..+- .+-.-.|+++...-..-...++.+|++++.++.+
T Consensus 87 v~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~ 138 (363)
T 3ffh_A 87 LIFTAGVDELIELLTRVL-LDTTTNTVMATPTFVQYRQNALIEGAEVREIPLL 138 (363)
T ss_dssp EEEESSHHHHHHHHHHHH-CSTTCEEEEEESSCHHHHHHHHHHTCEEEEEECC
T ss_pred EEEeCCHHHHHHHHHHHH-ccCCCEEEEcCCChHHHHHHHHHcCCEEEEecCC
Confidence 777788888877776554 2222234444434455667778899999988743
No 337
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=41.15 E-value=95 Score=24.96 Aligned_cols=73 Identities=22% Similarity=0.159 Sum_probs=45.3
Q ss_pred CeEEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCCCH--HHHHHH-HHcCCEEEEeCCCC-ChhHHHHHHHHHHHhC
Q 024040 69 KTVLIELTS--GNTGIGLAFIAASRGYKLIIIMPSTYSI--ERRIIL-RALGAEVYLADPAV-GFEGFVKKGEEILNRT 141 (273)
Q Consensus 69 ~~~vv~~ss--GN~g~a~A~~a~~~g~~~~i~~p~~~~~--~~~~~~-~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~~ 141 (273)
...+||..+ +--|.++|....+.|.+++++....... ...+.+ +.+|.++..+..+- +.++..+...+..++.
T Consensus 21 k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 99 (267)
T 3gdg_A 21 KVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADF 99 (267)
T ss_dssp CEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHHc
Confidence 355777766 6788999998888999988876554332 334444 34588887765432 3344444455554443
No 338
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=40.92 E-value=1.4e+02 Score=24.33 Aligned_cols=69 Identities=17% Similarity=0.092 Sum_probs=42.2
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHH-HHHcCCEEEEeCCC-CChhHHHHHHHHHHHh
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRII-LRALGAEVYLADPA-VGFEGFVKKGEEILNR 140 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~-~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 140 (273)
...+||..+|--|.++|..-.+.|.+++++-.. ..+++. .+.+|.++..+..+ .+.++..+...+..++
T Consensus 6 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 76 (281)
T 3zv4_A 6 EVALITGGASGLGRALVDRFVAEGARVAVLDKS---AERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAA 76 (281)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC---HHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 455888888889999999988899988776543 333333 34466666655432 2333444444444433
No 339
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=40.85 E-value=65 Score=28.12 Aligned_cols=48 Identities=19% Similarity=0.268 Sum_probs=34.9
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHH-cCCEEE
Q 024040 68 GKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRA-LGAEVY 119 (273)
Q Consensus 68 g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~-~Ga~v~ 119 (273)
+.+ |+....|+.|.++|..++.+|.+++++-+ .+.+++.++. +|+.+.
T Consensus 168 g~~-V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~---~~~~l~~~~~~~g~~~~ 216 (377)
T 2vhw_A 168 PAD-VVVIGAGTAGYNAARIANGMGATVTVLDI---NIDKLRQLDAEFCGRIH 216 (377)
T ss_dssp CCE-EEEECCSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHTTTSSE
T ss_pred CCE-EEEECCCHHHHHHHHHHHhCCCEEEEEeC---CHHHHHHHHHhcCCeeE
Confidence 444 67777799999999999999997665533 3566666655 787653
No 340
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=40.85 E-value=96 Score=27.79 Aligned_cols=52 Identities=19% Similarity=0.208 Sum_probs=36.8
Q ss_pred CCeEEEeeCCChHHHHHHHHHHHcCCe-EEEEecCCC-----CHHHHHHHHHcCCEEEE
Q 024040 68 GKTVLIELTSGNTGIGLAFIAASRGYK-LIIIMPSTY-----SIERRIILRALGAEVYL 120 (273)
Q Consensus 68 g~~~vv~~ssGN~g~a~A~~a~~~g~~-~~i~~p~~~-----~~~~~~~~~~~Ga~v~~ 120 (273)
+.+ |+...+||.|.-+|..+.++|.+ ++++.+... ....+..++..|.+++.
T Consensus 264 gk~-VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p~~~~e~~~~~~~Gv~~~~ 321 (456)
T 2vdc_G 264 GKH-VVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMPGSQREVAHAEEEGVEFIW 321 (456)
T ss_dssp CSE-EEEECSSHHHHHHHHHHHHTTCSEEEEECSSCSTTCSSCHHHHHHHHHTTCEEEC
T ss_pred CCE-EEEECCChhHHHHHHHHHHcCCCEEEEEEeCCccCCCCCHHHHHHHHHCCCEEEe
Confidence 444 88889999999999999999985 888865321 12334556666766654
No 341
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=40.81 E-value=1.2e+02 Score=27.40 Aligned_cols=98 Identities=13% Similarity=0.139 Sum_probs=61.5
Q ss_pred cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhC
Q 024040 62 KGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRT 141 (273)
Q Consensus 62 ~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~ 141 (273)
.+....|.+ ++....|+-|.++|..++.+|.+++++= .++.+.......|.++. ++++ +.++.
T Consensus 214 t~~~L~Gkt-V~ViG~G~IGk~vA~~Lra~Ga~Viv~D---~dp~ra~~A~~~G~~v~------~Lee-------al~~A 276 (435)
T 3gvp_A 214 TDMMFGGKQ-VVVCGYGEVGKGCCAALKAMGSIVYVTE---IDPICALQACMDGFRLV------KLNE-------VIRQV 276 (435)
T ss_dssp HCCCCTTCE-EEEECCSHHHHHHHHHHHHTTCEEEEEC---SCHHHHHHHHHTTCEEC------CHHH-------HTTTC
T ss_pred hCceecCCE-EEEEeeCHHHHHHHHHHHHCCCEEEEEe---CChhhhHHHHHcCCEec------cHHH-------HHhcC
Confidence 344556655 8899999999999999999999865542 23444444455776542 1222 22232
Q ss_pred CCeEeeCCCCCCcchHhhhhchHHHHHHhhCCCcCEEEEecCCCcc
Q 024040 142 PNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTGGT 187 (273)
Q Consensus 142 ~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~~~d~iv~p~G~Gg~ 187 (273)
+.+... -.+ ...+..|.++++ ++..+|+-+|.|..
T Consensus 277 -DIVi~a-tgt-------~~lI~~e~l~~M--K~gailINvgrg~~ 311 (435)
T 3gvp_A 277 -DIVITC-TGN-------KNVVTREHLDRM--KNSCIVCNMGHSNT 311 (435)
T ss_dssp -SEEEEC-SSC-------SCSBCHHHHHHS--CTTEEEEECSSTTT
T ss_pred -CEEEEC-CCC-------cccCCHHHHHhc--CCCcEEEEecCCCc
Confidence 444442 111 224455777787 46889999998865
No 342
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=40.80 E-value=1.7e+02 Score=25.00 Aligned_cols=102 Identities=15% Similarity=0.129 Sum_probs=64.3
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCCC
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQF 150 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 150 (273)
+|....-|+-|.++|..++.+|++++.+-+... .. . ...|++. ++ . .++.++. +...++--
T Consensus 143 tvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~-~~-~---~~~g~~~--~~----l-------~ell~~a-DvV~l~~P 203 (334)
T 2pi1_A 143 TLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKR-ED-L---KEKGCVY--TS----L-------DELLKES-DVISLHVP 203 (334)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC-HH-H---HHTTCEE--CC----H-------HHHHHHC-SEEEECCC
T ss_pred eEEEECcCHHHHHHHHHHHHCcCEEEEECCCcc-hh-h---HhcCcee--cC----H-------HHHHhhC-CEEEEeCC
Confidence 477788999999999999999999888766432 22 1 1356643 21 2 2233443 55555433
Q ss_pred CCCcchHhhhhchHHHHHHhhCCCcCEEEEecCCCccHH--HHHHHHHh
Q 024040 151 ENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTGGTVT--GAGRFLKE 197 (273)
Q Consensus 151 ~~~~~~~~g~~t~~~Ei~~q~~~~~d~iv~p~G~Gg~~~--Gi~~~~k~ 197 (273)
.++.. ...+..+.+.++ ++..+++-+|.|+..- .+..+++.
T Consensus 204 ~t~~t----~~li~~~~l~~m--k~gailIN~aRg~~vd~~aL~~aL~~ 246 (334)
T 2pi1_A 204 YTKET----HHMINEERISLM--KDGVYLINTARGKVVDTDALYRAYQR 246 (334)
T ss_dssp CCTTT----TTCBCHHHHHHS--CTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred CChHH----HHhhCHHHHhhC--CCCcEEEECCCCcccCHHHHHHHHHh
Confidence 23322 234556778888 5789999999999754 34444443
No 343
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=40.74 E-value=38 Score=28.36 Aligned_cols=32 Identities=34% Similarity=0.392 Sum_probs=23.8
Q ss_pred eEEEeeCCChHH---HHHHHHHHHcCCeEEEEecC
Q 024040 70 TVLIELTSGNTG---IGLAFIAASRGYKLIIIMPS 101 (273)
Q Consensus 70 ~~vv~~ssGN~g---~a~A~~a~~~g~~~~i~~p~ 101 (273)
+.+|.+..||.| ..+|...+..|.++.++++.
T Consensus 81 ~VlVlcG~GNNGGDGlv~AR~L~~~G~~V~V~~~~ 115 (265)
T 2o8n_A 81 TVLVICGPGNNGGDGLVCARHLKLFGYQPTIYYPK 115 (265)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECCS
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCcEEEEEeC
Confidence 457777888877 45555566679999999874
No 344
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=40.68 E-value=1.7e+02 Score=24.83 Aligned_cols=104 Identities=15% Similarity=0.062 Sum_probs=64.5
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEec-CCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCC
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMP-STYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQ 149 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p-~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 149 (273)
+|.....|+.|.++|..++.+|++++++-+ .. ... ..+.+|++. ++ +.+ ++.++. +...+.-
T Consensus 148 ~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~-~~~---~~~~~g~~~--~~---~l~-------ell~~a-DvVil~~ 210 (320)
T 1gdh_A 148 TLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRA-SSS---DEASYQATF--HD---SLD-------SLLSVS-QFFSLNA 210 (320)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSSCC-CHH---HHHHHTCEE--CS---SHH-------HHHHHC-SEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHHCCCEEEEECCCCc-Chh---hhhhcCcEE--cC---CHH-------HHHhhC-CEEEEec
Confidence 477778999999999999999999877765 33 332 234568753 21 122 223343 4555433
Q ss_pred CCCCcchHhhhhchHHHHHHhhCCCcCEEEEecCCCccHH--HHHHHHHh
Q 024040 150 FENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTGGTVT--GAGRFLKE 197 (273)
Q Consensus 150 ~~~~~~~~~g~~t~~~Ei~~q~~~~~d~iv~p~G~Gg~~~--Gi~~~~k~ 197 (273)
..++.. ...+..+++..+ +++.+++-+|+|+..- .+..+++.
T Consensus 211 p~~~~t----~~~i~~~~l~~m--k~gailIn~arg~~vd~~aL~~aL~~ 254 (320)
T 1gdh_A 211 PSTPET----RYFFNKATIKSL--PQGAIVVNTARGDLVDNELVVAALEA 254 (320)
T ss_dssp CCCTTT----TTCBSHHHHTTS--CTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred cCchHH----HhhcCHHHHhhC--CCCcEEEECCCCcccCHHHHHHHHHh
Confidence 323321 122345566666 4789999999987643 66666665
No 345
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=40.60 E-value=97 Score=25.31 Aligned_cols=72 Identities=18% Similarity=0.136 Sum_probs=41.6
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHH-HHcCCEEEEeCCCC-ChhHHHHHHHHHHHh
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS-IERRIIL-RALGAEVYLADPAV-GFEGFVKKGEEILNR 140 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~-~~~~~~~-~~~Ga~v~~~~~~~-~~~~~~~~a~~~~~~ 140 (273)
...+||..+|--|.++|..-.+.|.+++++-..... ......+ +..|.++..+..+- +.++..+...+..++
T Consensus 28 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 102 (277)
T 4fc7_A 28 KVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKE 102 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 355888888889999999888899988776543211 1112222 33577776664332 233334444444443
No 346
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=40.48 E-value=79 Score=26.70 Aligned_cols=44 Identities=30% Similarity=0.355 Sum_probs=34.4
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCE
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAE 117 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~ 117 (273)
.|.....|+.|.++|......|.+++++- .++.+.+.+...|++
T Consensus 33 ~I~iIG~G~mG~~~a~~l~~~G~~V~~~d---r~~~~~~~l~~~g~~ 76 (320)
T 4dll_A 33 KITFLGTGSMGLPMARRLCEAGYALQVWN---RTPARAASLAALGAT 76 (320)
T ss_dssp EEEEECCTTTHHHHHHHHHHTTCEEEEEC---SCHHHHHHHHTTTCE
T ss_pred EEEEECccHHHHHHHHHHHhCCCeEEEEc---CCHHHHHHHHHCCCE
Confidence 37777999999999999999999988773 355677776666654
No 347
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=40.32 E-value=1.4e+02 Score=23.78 Aligned_cols=52 Identities=15% Similarity=0.142 Sum_probs=35.3
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLAD 122 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~ 122 (273)
...+|+..+|.-|.++|..-.+.|.+++++......... ..+.+|.++..+.
T Consensus 13 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~ 64 (265)
T 2o23_A 13 LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEA--QAKKLGNNCVFAP 64 (265)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHH--HHHHHCTTEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHH--HHHHhCCceEEEE
Confidence 456888888999999999988899998887654332222 2233466565554
No 348
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=40.11 E-value=86 Score=25.62 Aligned_cols=32 Identities=31% Similarity=0.308 Sum_probs=25.9
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMP 100 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p 100 (273)
...+||..+|.-|.++|....+.|.+++++..
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 38 (280)
T 1xkq_A 7 KTVIITGSSNGIGRTTAILFAQEGANVTITGR 38 (280)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 45577888888999999998889998877654
No 349
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=40.09 E-value=1.4e+02 Score=23.81 Aligned_cols=52 Identities=13% Similarity=0.123 Sum_probs=34.5
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHH-HHHcCCEEEEeCC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRII-LRALGAEVYLADP 123 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~-~~~~Ga~v~~~~~ 123 (273)
...+|+..+|.-|.++|......|.+++++... ..+.+. .+.+|.++..+..
T Consensus 7 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~ 59 (253)
T 1hxh_A 7 KVALVTGGASGVGLEVVKLLLGEGAKVAFSDIN---EAAGQQLAAELGERSMFVRH 59 (253)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECSC---HHHHHHHHHHHCTTEEEECC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHcCCceEEEEc
Confidence 455788888889999999988899987766432 233332 2333666666554
No 350
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=39.93 E-value=1.8e+02 Score=25.02 Aligned_cols=104 Identities=22% Similarity=0.265 Sum_probs=63.5
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCCC
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQF 150 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 150 (273)
+|..-..|+.|.++|..++.+|++++++-+...+ . ..+.+|++. +. +.+ ++.++. +.+.+.-.
T Consensus 170 tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~-~---~~~~~g~~~--~~---~l~-------ell~~a-DvV~l~~P 232 (347)
T 1mx3_A 170 TLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSD-G---VERALGLQR--VS---TLQ-------DLLFHS-DCVTLHCG 232 (347)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCT-T---HHHHHTCEE--CS---SHH-------HHHHHC-SEEEECCC
T ss_pred EEEEEeECHHHHHHHHHHHHCCCEEEEECCCcch-h---hHhhcCCee--cC---CHH-------HHHhcC-CEEEEcCC
Confidence 4777789999999999999999998877554322 1 124467642 21 122 233343 55554322
Q ss_pred CCCcchHhhhhchHHHHHHhhCCCcCEEEEecCCCccH--HHHHHHHHh
Q 024040 151 ENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTGGTV--TGAGRFLKE 197 (273)
Q Consensus 151 ~~~~~~~~g~~t~~~Ei~~q~~~~~d~iv~p~G~Gg~~--~Gi~~~~k~ 197 (273)
.++.. ...+..+.+.++ +++.+++-++.|+.. ..+..++++
T Consensus 233 ~t~~t----~~li~~~~l~~m--k~gailIN~arg~~vd~~aL~~aL~~ 275 (347)
T 1mx3_A 233 LNEHN----HHLINDFTVKQM--RQGAFLVNTARGGLVDEKALAQALKE 275 (347)
T ss_dssp CCTTC----TTSBSHHHHTTS--CTTEEEEECSCTTSBCHHHHHHHHHH
T ss_pred CCHHH----HHHhHHHHHhcC--CCCCEEEECCCChHHhHHHHHHHHHh
Confidence 22221 123445667776 578999999999865 345555554
No 351
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=39.88 E-value=1.3e+02 Score=23.90 Aligned_cols=32 Identities=13% Similarity=0.207 Sum_probs=26.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMP 100 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p 100 (273)
...+||..+|--|.++|....+.|.+++++-.
T Consensus 4 k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r 35 (235)
T 3l6e_A 4 GHIIVTGAGSGLGRALTIGLVERGHQVSMMGR 35 (235)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 34588888888999999998899999777654
No 352
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=39.78 E-value=1.6e+02 Score=24.41 Aligned_cols=147 Identities=10% Similarity=0.047 Sum_probs=73.5
Q ss_pred HHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC-------C--------CCH-----HHHH-HH
Q 024040 53 YSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPS-------T--------YSI-----ERRI-IL 111 (273)
Q Consensus 53 ~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~-------~--------~~~-----~~~~-~~ 111 (273)
...+.++.+++. . .|+-..+.....+++-.+...+++++..... . .+. .-.+ .+
T Consensus 59 ~~~~~~l~~~~v----~-~iig~~~s~~~~~~~~~~~~~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (356)
T 3ipc_A 59 ISVANKFVADGV----K-FVVGHANSGVSIPASEVYAENGILEITPAATNPVFTERGLWNTFRTCGRDDQQGGIAGKYLA 133 (356)
T ss_dssp HHHHHHHHHTTC----C-EEEECSSHHHHHHHHHHHHTTTCEEEESSCCCGGGGSSCCTTEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCC----c-EEEcCCCcHHHHHHHHHHHhCCCeEEecCCCCcHhhcCCCCcEEEecCChHHHHHHHHHHHH
Confidence 444455555554 2 3665555566677778888899997763210 0 111 1122 23
Q ss_pred HHcCC-EEEEeCCCCChh-HHHHHHHHHHHhCCCeE-eeCCCCCCcchHhhhhchHHHHHHhhCCCcCEEEEecCCCccH
Q 024040 112 RALGA-EVYLADPAVGFE-GFVKKGEEILNRTPNGY-ILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTGGTV 188 (273)
Q Consensus 112 ~~~Ga-~v~~~~~~~~~~-~~~~~a~~~~~~~~~~~-~~~~~~~~~~~~~g~~t~~~Ei~~q~~~~~d~iv~p~G~Gg~~ 188 (273)
+.+|. +|..+..+..+. +..+..++..++.+... ....+. +.. ..+.....+|.+ ..||.||++ +++..+
T Consensus 134 ~~~g~~~iaii~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~-~~~--~d~~~~~~~l~~---~~~d~v~~~-~~~~~a 206 (356)
T 3ipc_A 134 DHFKDAKVAIIHDKTPYGQGLADETKKAANAAGVTEVMYEGVN-VGD--KDFSALISKMKE---AGVSIIYWG-GLHTEA 206 (356)
T ss_dssp HHCTTCCEEEEECSSHHHHHHHHHHHHHHHHTTCCCSEEEECC-TTC--CCCHHHHHHHHH---TTCCEEEEE-SCHHHH
T ss_pred HhcCCCEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEEeeC-CCC--CCHHHHHHHHHh---cCCCEEEEc-cCchHH
Confidence 44565 444443322222 22333333344442111 111111 000 112222333322 358988864 456677
Q ss_pred HHHHHHHHhhCCCcEEEEEecCC
Q 024040 189 TGAGRFLKEKNPNIKVYGIEPSE 211 (273)
Q Consensus 189 ~Gi~~~~k~~~~~~~vigVe~~~ 211 (273)
.++.+.+++.+.++.+++.....
T Consensus 207 ~~~~~~~~~~g~~~~~~~~~~~~ 229 (356)
T 3ipc_A 207 GLIIRQAADQGLKAKLVSGDGIV 229 (356)
T ss_dssp HHHHHHHHHHTCCCEEEECGGGC
T ss_pred HHHHHHHHHCCCCCcEEEecccc
Confidence 78999999988888888765433
No 353
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=39.76 E-value=93 Score=25.20 Aligned_cols=72 Identities=13% Similarity=0.147 Sum_probs=42.2
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH--HHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHHh
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSI--ERRIILRALGAEVYLADPA-VGFEGFVKKGEEILNR 140 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~--~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 140 (273)
...+|+..+|--|.++|....+.|.+++++....... .....++..|.++..+..+ .+.++..+...+..++
T Consensus 26 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 100 (269)
T 3gk3_A 26 RVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLAD 100 (269)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 3447777778888999998888999987765332211 1233445567666555432 2334444444444443
No 354
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=39.72 E-value=97 Score=25.40 Aligned_cols=55 Identities=11% Similarity=0.149 Sum_probs=35.4
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH--HHHHHHH-HcCCEEEEeCC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSI--ERRIILR-ALGAEVYLADP 123 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~--~~~~~~~-~~Ga~v~~~~~ 123 (273)
...+||..+|--|.++|....+.|.+++++....... ...+.++ ..|.++..+..
T Consensus 24 k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~ 81 (288)
T 2x9g_A 24 PAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQA 81 (288)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEEC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEe
Confidence 3457787888889999988888899877766542011 1123343 56777766543
No 355
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=39.61 E-value=54 Score=23.31 Aligned_cols=45 Identities=9% Similarity=0.046 Sum_probs=30.9
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 024040 72 LIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVY 119 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~ 119 (273)
++....|+.|..+|......|.+++++-+ .+.+.+.++..|.+++
T Consensus 9 v~I~G~G~iG~~~a~~l~~~g~~v~~~d~---~~~~~~~~~~~~~~~~ 53 (144)
T 2hmt_A 9 FAVIGLGRFGGSIVKELHRMGHEVLAVDI---NEEKVNAYASYATHAV 53 (144)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCCEEEES---CHHHHHTTTTTCSEEE
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHhCCEEE
Confidence 55555699999999999999998777644 3345554444555543
No 356
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=39.55 E-value=71 Score=28.68 Aligned_cols=51 Identities=27% Similarity=0.218 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHH-cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 024040 50 RIAYSMIKDAED-KGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPS 101 (273)
Q Consensus 50 R~a~~~~~~a~~-~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~ 101 (273)
||..+.+..+.+ .|.-..| .+|+.-..||-|..+|.....+|.+++.+...
T Consensus 202 ~Gv~~~~~~~~~~~g~~l~g-~~vaVqG~GnVG~~aa~~l~e~GakVVavsD~ 253 (424)
T 3k92_A 202 QGVTICIEEAVKKKGIKLQN-ARIIIQGFGNAGSFLAKFMHDAGAKVIGISDA 253 (424)
T ss_dssp HHHHHHHHHHHHHTTCCGGG-CEEEEECCSHHHHHHHHHHHHHTCEEEEEECS
T ss_pred HHHHHHHHHHHHHcCCCccc-CEEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 467777766654 3432233 45888888999999999888888887766653
No 357
>3v8e_A Nicotinamidase; hydrolase; HET: JJJ; 2.71A {Saccharomyces cerevisiae} PDB: 2h0r_A
Probab=39.52 E-value=1.1e+02 Score=24.26 Aligned_cols=51 Identities=22% Similarity=0.150 Sum_probs=33.7
Q ss_pred CeEEEeeCCChHH-HHHHHHHHHcCCeEEEEecC----CCC----HHHHHHHHHcCCEEE
Q 024040 69 KTVLIELTSGNTG-IGLAFIAASRGYKLIIIMPS----TYS----IERRIILRALGAEVY 119 (273)
Q Consensus 69 ~~~vv~~ssGN~g-~a~A~~a~~~g~~~~i~~p~----~~~----~~~~~~~~~~Ga~v~ 119 (273)
++-+++.-..+.+ .+.|..|..+|++++++..- +.. ..-++.|+..|++++
T Consensus 155 ~~l~i~G~~t~~CV~~Ta~~a~~~g~~v~v~~Da~~~~~~~~~~~~~al~~m~~~Gv~i~ 214 (216)
T 3v8e_A 155 DEVYIVGVALEYXVKATAISAAELGYKTTVLLDYTRPISDDPEVINKVKEELKAHNINVV 214 (216)
T ss_dssp CEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECSSCCHHHHHHHHHHHHHTTCEEE
T ss_pred CEEEEEEeccccHHHHHHHHHHHCCCEEEEeccccCCCCcccHHHHHHHHHHHHcCCEEe
Confidence 4545555556666 56777788899998888642 112 124777888888875
No 358
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=39.50 E-value=1.8e+02 Score=25.09 Aligned_cols=101 Identities=17% Similarity=0.161 Sum_probs=62.2
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCCC
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQF 150 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 150 (273)
+|....-|+-|.++|..++.+|++++.+-+...+ .. ..+.+ .+ ++ .++.++. +...++--
T Consensus 150 tvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-----~~-~~~~~--~~----~l-------~ell~~a-DvV~l~~P 209 (343)
T 2yq5_A 150 TVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNP-----EF-EPFLT--YT----DF-------DTVLKEA-DIVSLHTP 209 (343)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCG-----GG-TTTCE--EC----CH-------HHHHHHC-SEEEECCC
T ss_pred eEEEEecCHHHHHHHHHHhhCCCEEEEECCChhh-----hh-hcccc--cc----CH-------HHHHhcC-CEEEEcCC
Confidence 4777889999999999999999998888665321 11 11221 11 12 2233444 45554333
Q ss_pred CCCcchHhhhhchHHHHHHhhCCCcCEEEEecCCCccHH--HHHHHHHh
Q 024040 151 ENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTGGTVT--GAGRFLKE 197 (273)
Q Consensus 151 ~~~~~~~~g~~t~~~Ei~~q~~~~~d~iv~p~G~Gg~~~--Gi~~~~k~ 197 (273)
.++.. +..+..+.+.++ ++..+++-+|.|+..- .+..+++.
T Consensus 210 lt~~t----~~li~~~~l~~m--k~gailIN~aRg~~vd~~aL~~aL~~ 252 (343)
T 2yq5_A 210 LFPST----ENMIGEKQLKEM--KKSAYLINCARGELVDTGALIKALQD 252 (343)
T ss_dssp CCTTT----TTCBCHHHHHHS--CTTCEEEECSCGGGBCHHHHHHHHHH
T ss_pred CCHHH----HHHhhHHHHhhC--CCCcEEEECCCChhhhHHHHHHHHHc
Confidence 23322 234556778888 5789999999998754 34444544
No 359
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=39.41 E-value=71 Score=25.36 Aligned_cols=32 Identities=19% Similarity=0.260 Sum_probs=26.2
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 024040 70 TVLIELTSGNTGIGLAFIAASRGYKLIIIMPS 101 (273)
Q Consensus 70 ~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~ 101 (273)
+.+|+..+|.-|.++|....+.|.+++++...
T Consensus 4 ~vlItGasggiG~~~a~~l~~~G~~V~~~~r~ 35 (250)
T 2cfc_A 4 VAIVTGASSGNGLAIATRFLARGDRVAALDLS 35 (250)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 45888888999999999988899987776543
No 360
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=39.38 E-value=99 Score=24.31 Aligned_cols=51 Identities=24% Similarity=0.201 Sum_probs=33.1
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH--HHHHHHHHcCCEEEE
Q 024040 70 TVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSI--ERRIILRALGAEVYL 120 (273)
Q Consensus 70 ~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~--~~~~~~~~~Ga~v~~ 120 (273)
+.+|+..+|.-|.++|....+.|.+++++...+.+. ...+.++..|.++..
T Consensus 3 ~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~ 55 (245)
T 2ph3_A 3 KALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVA 55 (245)
T ss_dssp EEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEE
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEE
Confidence 447888888899999999888999887763332111 112344555665544
No 361
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=39.32 E-value=1e+02 Score=25.21 Aligned_cols=71 Identities=17% Similarity=0.067 Sum_probs=40.7
Q ss_pred CeEEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHH-cC-CEEEEeCCCCChhHHHHHHHHHHHh
Q 024040 69 KTVLIELTS--GNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRA-LG-AEVYLADPAVGFEGFVKKGEEILNR 140 (273)
Q Consensus 69 ~~~vv~~ss--GN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~-~G-a~v~~~~~~~~~~~~~~~a~~~~~~ 140 (273)
...+||..+ |--|.++|......|.+++++.........++.++. .| ..++.++- .+.++..+...+..++
T Consensus 22 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl-~~~~~v~~~~~~~~~~ 96 (285)
T 2p91_A 22 KRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDV-SLDEDIKNLKKFLEEN 96 (285)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCT-TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCC-CCHHHHHHHHHHHHHH
Confidence 345777766 778999999988899998877654322334455543 34 33344442 2333344444444444
No 362
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=39.31 E-value=81 Score=26.31 Aligned_cols=44 Identities=20% Similarity=0.029 Sum_probs=36.0
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE
Q 024040 72 LIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEV 118 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v 118 (273)
|.....|+.|.++|......|.+++++- .++.+.+.+...|+..
T Consensus 10 I~iIG~G~mG~~~a~~l~~~G~~V~~~d---r~~~~~~~~~~~g~~~ 53 (303)
T 3g0o_A 10 VGIVGLGSMGMGAARSCLRAGLSTWGAD---LNPQACANLLAEGACG 53 (303)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEEC---SCHHHHHHHHHTTCSE
T ss_pred EEEECCCHHHHHHHHHHHHCCCeEEEEE---CCHHHHHHHHHcCCcc
Confidence 6667899999999999999999988873 3567788887777755
No 363
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=39.15 E-value=1.2e+02 Score=23.82 Aligned_cols=51 Identities=20% Similarity=0.122 Sum_probs=34.1
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCC-------eEEEEecCCCCHHHH----HHHHHcCCEEEEeCC
Q 024040 70 TVLIELTSGNTGIGLAFIAASRGY-------KLIIIMPSTYSIERR----IILRALGAEVYLADP 123 (273)
Q Consensus 70 ~~vv~~ssGN~g~a~A~~a~~~g~-------~~~i~~p~~~~~~~~----~~~~~~Ga~v~~~~~ 123 (273)
..+|+..+|--|.++|....+.|. +++++... ..+. ..++..|.++..+..
T Consensus 4 ~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~ 65 (244)
T 2bd0_A 4 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRT---AADLEKISLECRAEGALTDTITA 65 (244)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESC---HHHHHHHHHHHHTTTCEEEEEEC
T ss_pred EEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCC---HHHHHHHHHHHHccCCeeeEEEe
Confidence 447888888899999998888888 66665443 2222 234445777766654
No 364
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=39.10 E-value=67 Score=25.89 Aligned_cols=68 Identities=10% Similarity=-0.011 Sum_probs=35.6
Q ss_pred eEEEeeCCChHHHHHHHHHHHcC--CeEEEEecCCCCHHHHHHH-HHcCCEEEEeCCC-CChhHHHHHHHHHHHh
Q 024040 70 TVLIELTSGNTGIGLAFIAASRG--YKLIIIMPSTYSIERRIIL-RALGAEVYLADPA-VGFEGFVKKGEEILNR 140 (273)
Q Consensus 70 ~~vv~~ssGN~g~a~A~~a~~~g--~~~~i~~p~~~~~~~~~~~-~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 140 (273)
..+||..+|--|.++|....+.| ..++++... ..+.+.+ +.+|.++..+..+ .+.++..+...+..++
T Consensus 4 ~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~---~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 75 (254)
T 3kzv_A 4 VILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARS---EAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKG 75 (254)
T ss_dssp EEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESC---HHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHhcCCCeEEEEecCC---HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence 44777777778888887766665 455444332 3333332 3346666555432 2233344444444443
No 365
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=39.10 E-value=1.5e+02 Score=23.90 Aligned_cols=36 Identities=25% Similarity=0.254 Sum_probs=27.1
Q ss_pred CCcCEEEEecCCCccHHHHHHHHHhhC----CCcEEEEEecC
Q 024040 173 GKVDAFIAGIGTGGTVTGAGRFLKEKN----PNIKVYGIEPS 210 (273)
Q Consensus 173 ~~~d~iv~p~G~Gg~~~Gi~~~~k~~~----~~~~vigVe~~ 210 (273)
++||+||+. +..++.|+..++++.+ .++.|+|.+-.
T Consensus 184 ~~~~ai~~~--~d~~A~g~~~al~~~g~~vP~di~vig~D~~ 223 (289)
T 3k9c_A 184 TPPTAVVAF--NDRCATGVLDLLVRSGRDVPADISVVGYDDS 223 (289)
T ss_dssp SCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEEECC
T ss_pred CCCCEEEEC--ChHHHHHHHHHHHHcCCCCCCceEEEEECCH
Confidence 468998875 4566778899998876 35788888744
No 366
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=39.07 E-value=99 Score=21.71 Aligned_cols=47 Identities=19% Similarity=0.154 Sum_probs=32.7
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-HcCCEEEEe
Q 024040 72 LIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILR-ALGAEVYLA 121 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~-~~Ga~v~~~ 121 (273)
++....|+.|..+|......|.+++++-+ ++.+.+.++ .+|.+++..
T Consensus 7 i~IiG~G~iG~~~a~~L~~~g~~v~~~d~---~~~~~~~~~~~~~~~~~~~ 54 (140)
T 1lss_A 7 IIIAGIGRVGYTLAKSLSEKGHDIVLIDI---DKDICKKASAEIDALVING 54 (140)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHCSSEEEES
T ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEEC---CHHHHHHHHHhcCcEEEEc
Confidence 56667899999999998888988777644 344555554 346665443
No 367
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=39.04 E-value=52 Score=26.67 Aligned_cols=112 Identities=10% Similarity=0.049 Sum_probs=58.4
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHc---------------CCEEEEeCCCCChhHHHHHHHH
Q 024040 72 LIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRAL---------------GAEVYLADPAVGFEGFVKKGEE 136 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~---------------Ga~v~~~~~~~~~~~~~~~a~~ 136 (273)
++...+|..|...+..-...|.+++|+-|+.. +.-....+.. |+.+++...+. ++......+
T Consensus 34 VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~-~~l~~l~~~~~i~~i~~~~~~~dL~~adLVIaAT~d--~~~N~~I~~ 110 (223)
T 3dfz_A 34 VLVVGGGTIATRRIKGFLQEGAAITVVAPTVS-AEINEWEAKGQLRVKRKKVGEEDLLNVFFIVVATND--QAVNKFVKQ 110 (223)
T ss_dssp EEEECCSHHHHHHHHHHGGGCCCEEEECSSCC-HHHHHHHHTTSCEEECSCCCGGGSSSCSEEEECCCC--THHHHHHHH
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEECCCCC-HHHHHHHHcCCcEEEECCCCHhHhCCCCEEEECCCC--HHHHHHHHH
Confidence 77778888888888888888988888887643 3222222222 33333332211 123333333
Q ss_pred HHHhCCCeEeeCCCCCCcchHhhhhchHHHHHHhhCCCcCEEEEecCCCccHHHHHHHHHhh
Q 024040 137 ILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEK 198 (273)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~~~d~iv~p~G~Gg~~~Gi~~~~k~~ 198 (273)
.++ . ..+++-.++|.... + +.+-+. +-+-+.++++|||..-.+++.+++.
T Consensus 111 ~ak-~--gi~VNvvD~p~~~~--f--~~Paiv-----~rg~l~iaIST~G~sP~la~~iR~~ 160 (223)
T 3dfz_A 111 HIK-N--DQLVNMASSFSDGN--I--QIPAQF-----SRGRLSLAISTDGASPLLTKRIKED 160 (223)
T ss_dssp HSC-T--TCEEEC-----CCS--E--ECCEEE-----EETTEEEEEECTTSCHHHHHHHHHH
T ss_pred HHh-C--CCEEEEeCCcccCe--E--EEeeEE-----EeCCEEEEEECCCCCcHHHHHHHHH
Confidence 343 2 23454555544321 0 000001 1234788888888888888888753
No 368
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=38.71 E-value=34 Score=29.60 Aligned_cols=30 Identities=20% Similarity=0.464 Sum_probs=26.7
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMP 100 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p 100 (273)
.|+...+|-.|.++|+.+++.|++++|+=.
T Consensus 6 DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~ 35 (397)
T 2oln_A 6 DVVVVGGGPVGLATAWQVAERGHRVLVLER 35 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEeC
Confidence 488899999999999999999999888753
No 369
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=38.62 E-value=1e+02 Score=24.72 Aligned_cols=50 Identities=10% Similarity=0.154 Sum_probs=34.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADP 123 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~ 123 (273)
...+||..+|--|.++|..-.+.|.+++++-.. .. +..+.++.++..+..
T Consensus 10 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~--~~---~~~~~~~~~~~~~~~ 59 (257)
T 3tl3_A 10 AVAVVTGGASGLGLATTKRLLDAGAQVVVLDIR--GE---DVVADLGDRARFAAA 59 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESS--CH---HHHHHTCTTEEEEEC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCc--hH---HHHHhcCCceEEEEC
Confidence 345788888889999999988899998877552 22 223345666665543
No 370
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=38.40 E-value=21 Score=34.89 Aligned_cols=40 Identities=20% Similarity=0.387 Sum_probs=31.5
Q ss_pred HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 024040 61 DKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMP 100 (273)
Q Consensus 61 ~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p 100 (273)
+.+.+++|++.+|...+|.-|.+....|+.+|.++++...
T Consensus 339 ~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~ 378 (795)
T 3slk_A 339 DLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATAS 378 (795)
T ss_dssp CCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECC
T ss_pred HHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeC
Confidence 4567888888555555799999999999999998776553
No 371
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=38.32 E-value=1e+02 Score=25.51 Aligned_cols=33 Identities=30% Similarity=0.323 Sum_probs=26.4
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPS 101 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~ 101 (273)
...+||..+|.-|.++|..-.+.|.+++++...
T Consensus 27 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~ 59 (297)
T 1xhl_A 27 KSVIITGSSNGIGRSAAVIFAKEGAQVTITGRN 59 (297)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 345788888889999999988899998776543
No 372
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=38.31 E-value=1.3e+02 Score=27.28 Aligned_cols=98 Identities=15% Similarity=0.128 Sum_probs=62.7
Q ss_pred cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhC
Q 024040 62 KGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRT 141 (273)
Q Consensus 62 ~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~ 141 (273)
.+....|.+ ++....|+-|+++|..++.+|.+++++-+ .+.+.......|.++. + +++ +.++.
T Consensus 241 tg~~L~GKT-VgVIG~G~IGr~vA~~lrafGa~Viv~d~---dp~~a~~A~~~G~~vv--~----LeE-------lL~~A 303 (464)
T 3n58_A 241 TDVMMAGKV-AVVCGYGDVGKGSAQSLAGAGARVKVTEV---DPICALQAAMDGFEVV--T----LDD-------AASTA 303 (464)
T ss_dssp HCCCCTTCE-EEEECCSHHHHHHHHHHHHTTCEEEEECS---SHHHHHHHHHTTCEEC--C----HHH-------HGGGC
T ss_pred cCCcccCCE-EEEECcCHHHHHHHHHHHHCCCEEEEEeC---CcchhhHHHhcCceec--c----HHH-------HHhhC
Confidence 345556655 88899999999999999999998776532 3344444445677652 1 222 23333
Q ss_pred CCeEeeCCCCCCcchHhhhhchHHHHHHhhCCCcCEEEEecCCCcc
Q 024040 142 PNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTGGT 187 (273)
Q Consensus 142 ~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~~~d~iv~p~G~Gg~ 187 (273)
+.+.... .+ ...+..|.++++ ++..+++-+|-|..
T Consensus 304 -DIVv~at-gt-------~~lI~~e~l~~M--K~GAILINvGRgdv 338 (464)
T 3n58_A 304 -DIVVTTT-GN-------KDVITIDHMRKM--KDMCIVGNIGHFDN 338 (464)
T ss_dssp -SEEEECC-SS-------SSSBCHHHHHHS--CTTEEEEECSSSTT
T ss_pred -CEEEECC-CC-------ccccCHHHHhcC--CCCeEEEEcCCCCc
Confidence 4444322 11 224556777887 57899999998874
No 373
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=38.13 E-value=36 Score=28.73 Aligned_cols=31 Identities=19% Similarity=0.315 Sum_probs=27.5
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMPS 101 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~ 101 (273)
.|+.-.+|-.|.++|+.+++.|++++|+=..
T Consensus 6 dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~ 36 (369)
T 3dme_A 6 DCIVIGAGVVGLAIARALAAGGHEVLVAEAA 36 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4888999999999999999999999988543
No 374
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=38.04 E-value=83 Score=25.96 Aligned_cols=45 Identities=16% Similarity=0.122 Sum_probs=35.4
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 024040 72 LIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVY 119 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~ 119 (273)
|.....|+.|.++|....+.|.+++++-+ ++.+.+.++..|.++.
T Consensus 6 i~iiG~G~~G~~~a~~l~~~g~~V~~~~r---~~~~~~~~~~~g~~~~ 50 (316)
T 2ew2_A 6 IAIAGAGAMGSRLGIMLHQGGNDVTLIDQ---WPAHIEAIRKNGLIAD 50 (316)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECS---CHHHHHHHHHHCEEEE
T ss_pred EEEECcCHHHHHHHHHHHhCCCcEEEEEC---CHHHHHHHHhCCEEEE
Confidence 66678899999999999999998887744 3567777777786654
No 375
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=38.01 E-value=75 Score=27.90 Aligned_cols=51 Identities=16% Similarity=0.300 Sum_probs=36.1
Q ss_pred EEeeCCC--hHHHHHHHHHHHcCCeEEEEecCCC----CHHHHH----HHHHcCCEEEEeC
Q 024040 72 LIELTSG--NTGIGLAFIAASRGYKLIIIMPSTY----SIERRI----ILRALGAEVYLAD 122 (273)
Q Consensus 72 vv~~ssG--N~g~a~A~~a~~~g~~~~i~~p~~~----~~~~~~----~~~~~Ga~v~~~~ 122 (273)
|+-...+ |.+.|++.+++++|++++++.|+.- ++.-++ ..+..|+++..+.
T Consensus 183 va~vGD~~nnva~Sl~~~~~~lG~~v~~~~P~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~ 243 (365)
T 4amu_A 183 IVFIGDYKNNVGVSTMIGAAFNGMHVVMCGPDNYKNEIDKNVLAKCIELFKRNGGSLRFST 243 (365)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEESCGGGGGGSCHHHHHHHHHHHHHHSCEEEEES
T ss_pred EEEECCCCcchHHHHHHHHHHcCCEEEEECCccccCCCcHHHHHHHHHHHHHcCCEEEEEC
Confidence 5555444 7899999999999999999999753 223222 2455788887765
No 376
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=37.98 E-value=89 Score=28.25 Aligned_cols=50 Identities=16% Similarity=0.051 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHH-cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 024040 50 RIAYSMIKDAED-KGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMP 100 (273)
Q Consensus 50 R~a~~~~~~a~~-~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p 100 (273)
||+.+.+..+.+ .|.-..| ++|+....||-|..+|.....+|.+++.+..
T Consensus 211 ~Gv~~~~~~~~~~~G~~l~g-~~v~VqG~GnVG~~~a~~L~~~GakvVavsD 261 (449)
T 1bgv_A 211 YGSVYYVEAVMKHENDTLVG-KTVALAGFGNVAWGAAKKLAELGAKAVTLSG 261 (449)
T ss_dssp HHHHHHHHHHHHHTTCCSTT-CEEEECCSSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHHHHHHccCCcCC-CEEEEECCCHHHHHHHHHHHHCCCEEEEEEe
Confidence 688877777654 4532234 4488888899999999988888998887654
No 377
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=37.96 E-value=59 Score=27.33 Aligned_cols=54 Identities=15% Similarity=0.104 Sum_probs=31.1
Q ss_pred EEEeeCCChHHHHHHHHHHHc---CCeEEEEecCCCCHHH---HHHHHHcCCEEEEeCCC
Q 024040 71 VLIELTSGNTGIGLAFIAASR---GYKLIIIMPSTYSIER---RIILRALGAEVYLADPA 124 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~---g~~~~i~~p~~~~~~~---~~~~~~~Ga~v~~~~~~ 124 (273)
.++..++|..+..++..+-.. +-.-.|+++...-... ...++..|++++.++.+
T Consensus 62 ~i~~~~g~~~a~~~~~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 121 (382)
T 4hvk_A 62 TVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVG 121 (382)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBC
T ss_pred eEEEECCchHHHHHHHHHhhhhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccC
Confidence 477777777777666654421 2222444554333333 33445679999998753
No 378
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=37.89 E-value=1.7e+02 Score=23.98 Aligned_cols=32 Identities=22% Similarity=0.374 Sum_probs=23.5
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMP 100 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p 100 (273)
...+||..+|--|.++|....+.|.+++++-.
T Consensus 34 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r 65 (281)
T 4dry_A 34 RIALVTGGGTGVGRGIAQALSAEGYSVVITGR 65 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 34577777777888888887788888766543
No 379
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=37.81 E-value=1.4e+02 Score=23.88 Aligned_cols=32 Identities=22% Similarity=0.320 Sum_probs=26.5
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMP 100 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p 100 (273)
...+|+..+|.-|.++|....+.|.+++++..
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 39 (260)
T 2z1n_A 8 KLAVVTAGSSGLGFASALELARNGARLLLFSR 39 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 45588888899999999998889998777654
No 380
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=37.80 E-value=1.5e+02 Score=23.44 Aligned_cols=44 Identities=11% Similarity=0.228 Sum_probs=30.9
Q ss_pred hHHHHHHhhCCCcCEEEEecCCCccHHHHHHHHHhhC--CCcEEEEEec
Q 024040 163 TGPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKN--PNIKVYGIEP 209 (273)
Q Consensus 163 ~~~Ei~~q~~~~~d~iv~p~G~Gg~~~Gi~~~~k~~~--~~~~vigVe~ 209 (273)
...+++++- +++|+||+. +..++.|+..++++.+ .++.|+|...
T Consensus 177 ~~~~~l~~~-~~~~ai~~~--~d~~a~g~~~al~~~g~p~di~vig~d~ 222 (276)
T 3ksm_A 177 EMLRLLKET-PTIDGLFTP--NESTTIGALVAIRQSGMSKQFGFIGFDQ 222 (276)
T ss_dssp HHHHHHHHC-SCCCEEECC--SHHHHHHHHHHHHHTTCTTSSEEEEESC
T ss_pred HHHHHHHhC-CCceEEEEC--CchhhhHHHHHHHHcCCCCCeEEEEeCC
Confidence 344555543 578999876 5567788999998877 3677888764
No 381
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=37.79 E-value=79 Score=24.88 Aligned_cols=55 Identities=25% Similarity=0.254 Sum_probs=35.7
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH-HHHHHH-HHcCCEEEEeCC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSI-ERRIIL-RALGAEVYLADP 123 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~-~~~~~~-~~~Ga~v~~~~~ 123 (273)
...+||..+|.-|.++|....+.|.++++........ .....+ +..|.++..+..
T Consensus 3 k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 59 (235)
T 3l77_A 3 KVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHL 59 (235)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEe
Confidence 3457888888899999999999999977765432111 112222 256777776653
No 382
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=37.78 E-value=2e+02 Score=24.98 Aligned_cols=111 Identities=14% Similarity=0.134 Sum_probs=68.6
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCCC
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQF 150 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 150 (273)
+|....-|+-|.++|..++.+|++++.+-|.. +. ......|++. . ++ .++.++. +...++--
T Consensus 178 tvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~-~~---~~~~~~g~~~--~----~l-------~ell~~a-DvV~l~~P 239 (365)
T 4hy3_A 178 EIGIVGFGDLGKALRRVLSGFRARIRVFDPWL-PR---SMLEENGVEP--A----SL-------EDVLTKS-DFIFVVAA 239 (365)
T ss_dssp EEEEECCSHHHHHHHHHHTTSCCEEEEECSSS-CH---HHHHHTTCEE--C----CH-------HHHHHSC-SEEEECSC
T ss_pred EEEEecCCcccHHHHHhhhhCCCEEEEECCCC-CH---HHHhhcCeee--C----CH-------HHHHhcC-CEEEEcCc
Confidence 48888999999999999999999988776642 22 2334567752 1 12 2333443 55554333
Q ss_pred CCCcchHhhhhchHHHHHHhhCCCcCEEEEecCCCccHH--HHHHHHHhhCCCcEEEEEe
Q 024040 151 ENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTGGTVT--GAGRFLKEKNPNIKVYGIE 208 (273)
Q Consensus 151 ~~~~~~~~g~~t~~~Ei~~q~~~~~d~iv~p~G~Gg~~~--Gi~~~~k~~~~~~~vigVe 208 (273)
.++.. ...+..+.+.++ ++..+++-++.|+.+- .+..+++. .... .+.+
T Consensus 240 lt~~T----~~li~~~~l~~m--k~gailIN~aRG~~vde~aL~~aL~~--g~i~-aaLD 290 (365)
T 4hy3_A 240 VTSEN----KRFLGAEAFSSM--RRGAAFILLSRADVVDFDALMAAVSS--GHIV-AASD 290 (365)
T ss_dssp SSCC-------CCCHHHHHTS--CTTCEEEECSCGGGSCHHHHHHHHHT--TSSE-EEES
T ss_pred CCHHH----HhhcCHHHHhcC--CCCcEEEECcCCchhCHHHHHHHHHc--CCce-EEee
Confidence 23322 233556778887 5789999999998764 34444543 3344 4544
No 383
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=37.76 E-value=1.4e+02 Score=23.59 Aligned_cols=33 Identities=18% Similarity=0.253 Sum_probs=27.2
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPS 101 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~ 101 (273)
.+.+|+..+|.-|.++|....+.|.+++++...
T Consensus 12 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~ 44 (254)
T 2wsb_A 12 ACAAVTGAGSGIGLEICRAFAASGARLILIDRE 44 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 455888888999999999999999998777553
No 384
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=37.75 E-value=37 Score=29.56 Aligned_cols=31 Identities=16% Similarity=0.155 Sum_probs=27.7
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMPS 101 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~ 101 (273)
.|+...+|-.|.++|+..++.|++++|+=..
T Consensus 25 dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~ 55 (407)
T 3rp8_A 25 KAIVIGAGIGGLSAAVALKQSGIDCDVYEAV 55 (407)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCEEEEeCC
Confidence 4888999999999999999999999888644
No 385
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=37.73 E-value=1.9e+02 Score=24.52 Aligned_cols=51 Identities=14% Similarity=0.046 Sum_probs=30.6
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 024040 72 LIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADP 123 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~ 123 (273)
++..++|..+..++..+- .+-.-.|+++...-..-...++..|++++.++-
T Consensus 105 i~~~~g~~~a~~~~~~~l-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~ 155 (407)
T 3nra_A 105 LIITPGTQGALFLAVAAT-VARGDKVAIVQPDYFANRKLVEFFEGEMVPVQL 155 (407)
T ss_dssp EEEESHHHHHHHHHHHTT-CCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEB
T ss_pred EEEeCCcHHHHHHHHHHh-CCCCCEEEEcCCcccchHHHHHHcCCEEEEeec
Confidence 677777777766665432 222223344433333556778889999988764
No 386
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=37.49 E-value=37 Score=29.18 Aligned_cols=30 Identities=23% Similarity=0.314 Sum_probs=27.0
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMP 100 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p 100 (273)
.|..-.+|-.|.+.|..++..|++++++=+
T Consensus 8 ~VaViGaG~MG~giA~~~a~~G~~V~l~D~ 37 (319)
T 3ado_A 8 DVLIVGSGLVGRSWAMLFASGGFRVKLYDI 37 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred eEEEECCcHHHHHHHHHHHhCCCeEEEEEC
Confidence 488889999999999999999999999854
No 387
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=37.47 E-value=1e+02 Score=27.96 Aligned_cols=51 Identities=12% Similarity=-0.022 Sum_probs=36.3
Q ss_pred hHHHHHHHHHHHHc-CCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 024040 49 DRIAYSMIKDAEDK-GLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMP 100 (273)
Q Consensus 49 ~R~a~~~~~~a~~~-g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p 100 (273)
-||..+.+..+.+. |.-..|. +|+.-..||-|..+|.....+|.+++.+..
T Consensus 219 g~Gv~~~~~~~~~~~g~~l~g~-~VaVQG~GnVG~~aa~~L~e~GakvVavsD 270 (456)
T 3r3j_A 219 GYGVVYFAENVLKDLNDNLENK-KCLVSGSGNVAQYLVEKLIEKGAIVLTMSD 270 (456)
T ss_dssp HHHHHHHHHHHHHTTTCCSTTC-CEEEECCSHHHHHHHHHHHHHTCCBCCEEC
T ss_pred chHHHHHHHHHHHHcCCCccCC-EEEEECCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 45777777776653 3322344 488888899999999988888888765544
No 388
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=37.14 E-value=1.3e+02 Score=24.05 Aligned_cols=32 Identities=31% Similarity=0.318 Sum_probs=25.8
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMP 100 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p 100 (273)
...+||..+|--|.++|..-.+.|.+++++-.
T Consensus 10 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r 41 (248)
T 3op4_A 10 KVALVTGASRGIGKAIAELLAERGAKVIGTAT 41 (248)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 45577878888899999998889999877654
No 389
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=37.11 E-value=1.2e+02 Score=24.74 Aligned_cols=68 Identities=9% Similarity=0.068 Sum_probs=39.4
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHcCCEEEEeCCC-CChhHHHHHHHHHHH
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRI-ILRALGAEVYLADPA-VGFEGFVKKGEEILN 139 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~-~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~ 139 (273)
...+||..+|--|.++|....+.|.+++++-.. ..+.+ ..+.+|.++..+..+ .+.++..+...+..+
T Consensus 30 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 99 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLADEGCHVLCADID---GDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVA 99 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHH
Confidence 355778788889999999988899988776543 23322 233345555444322 233333344444433
No 390
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=37.06 E-value=83 Score=26.36 Aligned_cols=43 Identities=23% Similarity=0.241 Sum_probs=34.7
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCE
Q 024040 72 LIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAE 117 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~ 117 (273)
|.....|+.|.++|......|.+++++ +.++.+.+.+...|+.
T Consensus 12 IgiIG~G~mG~~~A~~l~~~G~~V~~~---dr~~~~~~~~~~~g~~ 54 (306)
T 3l6d_A 12 VSVIGLGAMGTIMAQVLLKQGKRVAIW---NRSPGKAAALVAAGAH 54 (306)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEE---CSSHHHHHHHHHHTCE
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHHHCCCe
Confidence 666689999999999999999998887 3456777777777864
No 391
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=37.01 E-value=1.8e+02 Score=24.20 Aligned_cols=46 Identities=13% Similarity=0.168 Sum_probs=32.5
Q ss_pred hHHHHHHhhCCCcCEEEEecCCCccHHHHHHHHHhhCC----CcEEEEEecCC
Q 024040 163 TGPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNP----NIKVYGIEPSE 211 (273)
Q Consensus 163 ~~~Ei~~q~~~~~d~iv~p~G~Gg~~~Gi~~~~k~~~~----~~~vigVe~~~ 211 (273)
...+++++- +++|+||+. +...+.|+..++++.+. ++.|+|..-..
T Consensus 195 ~~~~~L~~~-~~~~aI~~~--~d~~a~g~~~al~~~G~~vP~di~vvg~d~~~ 244 (350)
T 3h75_A 195 QAQQLLKRY-PKTQLVWSA--NDEMALGAMQAARELGRKPGTDLLFSGVNSSP 244 (350)
T ss_dssp HHHHHHHHC-TTEEEEEES--SHHHHHHHHHHHHHTTCCBTTTBEEEEESCCH
T ss_pred HHHHHHHhC-CCcCEEEEC--ChHHHHHHHHHHHHcCCCCCCCeEEEecCCCH
Confidence 345555553 568988875 45677799999998773 58899987543
No 392
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=36.96 E-value=1.5e+02 Score=26.61 Aligned_cols=97 Identities=19% Similarity=0.201 Sum_probs=60.9
Q ss_pred CCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCC
Q 024040 63 GLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTP 142 (273)
Q Consensus 63 g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~ 142 (273)
+....|.+ |+...-|+-|.++|..++.+|.+++++=+ .+.+.......|.++. +.++ +.++.
T Consensus 206 g~~L~Gkt-VgIiG~G~IG~~vA~~Lka~Ga~Viv~D~---~p~~a~~A~~~G~~~~------sL~e-------al~~A- 267 (436)
T 3h9u_A 206 DVMIAGKT-ACVCGYGDVGKGCAAALRGFGARVVVTEV---DPINALQAAMEGYQVL------LVED-------VVEEA- 267 (436)
T ss_dssp CCCCTTCE-EEEECCSHHHHHHHHHHHHTTCEEEEECS---CHHHHHHHHHTTCEEC------CHHH-------HTTTC-
T ss_pred CCcccCCE-EEEEeeCHHHHHHHHHHHHCCCEEEEECC---ChhhhHHHHHhCCeec------CHHH-------HHhhC-
Confidence 44445555 88899999999999999999998666533 3445555556787642 1222 22332
Q ss_pred CeEeeCCCCCCcchHhhhhchHHHHHHhhCCCcCEEEEecCCCcc
Q 024040 143 NGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTGGT 187 (273)
Q Consensus 143 ~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~~~d~iv~p~G~Gg~ 187 (273)
+.+..... +.. .+..|.++++ +++.||+-+|.|..
T Consensus 268 DVVilt~g-t~~-------iI~~e~l~~M--K~gAIVINvgRg~v 302 (436)
T 3h9u_A 268 HIFVTTTG-NDD-------IITSEHFPRM--RDDAIVCNIGHFDT 302 (436)
T ss_dssp SEEEECSS-CSC-------SBCTTTGGGC--CTTEEEEECSSSGG
T ss_pred CEEEECCC-CcC-------ccCHHHHhhc--CCCcEEEEeCCCCC
Confidence 44444221 211 1223556666 57899999998875
No 393
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=36.96 E-value=62 Score=27.31 Aligned_cols=45 Identities=22% Similarity=0.155 Sum_probs=36.5
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 024040 72 LIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVY 119 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~ 119 (273)
|---.-||+|..+|..-.+.|.+++++ +.++.+.+.+...|+++.
T Consensus 6 IgfIGlG~MG~~mA~~L~~~G~~v~v~---dr~~~~~~~l~~~Ga~~a 50 (300)
T 3obb_A 6 IAFIGLGHMGAPMATNLLKAGYLLNVF---DLVQSAVDGLVAAGASAA 50 (300)
T ss_dssp EEEECCSTTHHHHHHHHHHTTCEEEEE---CSSHHHHHHHHHTTCEEC
T ss_pred EEEeeehHHHHHHHHHHHhCCCeEEEE---cCCHHHHHHHHHcCCEEc
Confidence 555577999999999988999999988 456788888887887653
No 394
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=36.84 E-value=1.4e+02 Score=26.10 Aligned_cols=54 Identities=15% Similarity=0.191 Sum_probs=37.3
Q ss_pred CCeEEEeeCC-ChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHHH------cCCEEEEeC
Q 024040 68 GKTVLIELTS-GNTGIGLAFIAASRGYKLIIIMPSTY--SIERRIILRA------LGAEVYLAD 122 (273)
Q Consensus 68 g~~~vv~~ss-GN~g~a~A~~a~~~g~~~~i~~p~~~--~~~~~~~~~~------~Ga~v~~~~ 122 (273)
|.+ |+-... -|.+.+++.+++++|++++++.|+.. ++.-++.++. .|+.+..+.
T Consensus 188 glk-va~vGD~~nva~Sl~~~l~~lG~~v~~~~P~~~~~~~~i~~~~~~~a~~~~~g~~~~~~~ 250 (353)
T 3sds_A 188 GLK-IAWVGDANNVLFDLAIAATKMGVNVAVATPRGYEIPSHIVELIQKAREGVQSPGNLTQTT 250 (353)
T ss_dssp TCE-EEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHTTCSSCCCEEEES
T ss_pred CCE-EEEECCCchHHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHhhhhccCCCeEEEEC
Confidence 344 544443 57789999999999999999999864 4444444443 366776664
No 395
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=36.81 E-value=60 Score=27.33 Aligned_cols=44 Identities=18% Similarity=0.178 Sum_probs=33.6
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCE
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAE 117 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~ 117 (273)
.|.....|+.|.++|......|.+++++-+ ++.+.+.+...|++
T Consensus 23 ~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr---~~~~~~~l~~~g~~ 66 (310)
T 3doj_A 23 EVGFLGLGIMGKAMSMNLLKNGFKVTVWNR---TLSKCDELVEHGAS 66 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECS---SGGGGHHHHHTTCE
T ss_pred EEEEECccHHHHHHHHHHHHCCCeEEEEeC---CHHHHHHHHHCCCe
Confidence 377779999999999999999999888744 33455556666664
No 396
>3snr_A Extracellular ligand-binding receptor; structural genomics, APC102214, PSI-biology, midwest center structural genomics, MCSG; HET: MSE TYR PHE; 1.49A {Rhodopseudomonas palustris} PDB: 3uk0_A* 3t23_A* 3ukj_A* 4eyo_A* 4eyq_A* 3tx6_A* 4f8j_A* 4fb4_A*
Probab=36.69 E-value=1.8e+02 Score=24.02 Aligned_cols=147 Identities=10% Similarity=0.087 Sum_probs=75.8
Q ss_pred HHHHHHHHHc-CCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-------------CCH-----HHHHHHHH
Q 024040 53 YSMIKDAEDK-GLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPST-------------YSI-----ERRIILRA 113 (273)
Q Consensus 53 ~~~~~~a~~~-g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~-------------~~~-----~~~~~~~~ 113 (273)
...+.++.++ +. ..|+-..+.....+++-.+...+++++.+.... .+. .-.+.+..
T Consensus 58 ~~~~~~l~~~~~v-----~~iig~~~s~~~~~~~~~~~~~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 132 (362)
T 3snr_A 58 TTNARRFVTESKA-----DVIMGSSVTPPSVAISNVANEAQIPHIALAPLPITPERAKWSVVMPQPIPIMGKVLYEHMKK 132 (362)
T ss_dssp HHHHHHHHHTSCC-----SEEEECSSHHHHHHHHHHHHHHTCCEEESSCCCCCTTTTTTEEECSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCc-----eEEEcCCCcHHHHHHHHHHHHcCccEEEecCCccccCCCCcEEecCCChHHHHHHHHHHHHh
Confidence 4445555555 44 236655555566677777888999987754110 011 12344555
Q ss_pred cCC-EEEEeCCCCCh-hHHHHHHHHHHHhCCCeEe-eCCCCCCcchHhhhhchHHHHHHhhCCCcCEEEEecCCCccHHH
Q 024040 114 LGA-EVYLADPAVGF-EGFVKKGEEILNRTPNGYI-LGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTGGTVTG 190 (273)
Q Consensus 114 ~Ga-~v~~~~~~~~~-~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~g~~t~~~Ei~~q~~~~~d~iv~p~G~Gg~~~G 190 (273)
+|. +|..+..+..+ .+..+..++..++.+..+. ...+. +.. ..+.....+|.+ .+||.||+. +.+..+.+
T Consensus 133 ~g~~~ia~i~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~-~~~--~~~~~~~~~l~~---~~~dav~~~-~~~~~a~~ 205 (362)
T 3snr_A 133 NNVKTVGYIGYSDSYGDLWFNDLKKQGEAMGLKIVGEERFA-RPD--TSVAGQALKLVA---ANPDAILVG-ASGTAAAL 205 (362)
T ss_dssp TTCCEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEEEC-TTC--SCCHHHHHHHHH---HCCSEEEEE-CCHHHHHH
T ss_pred cCCCEEEEEecCchHHHHHHHHHHHHHHHcCCEEEEEeecC-CCC--CCHHHHHHHHHh---cCCCEEEEe-cCcchHHH
Confidence 674 45444332222 2233333444455422211 11111 000 112222233333 258988875 45677889
Q ss_pred HHHHHHhhCCCcEEEEEecCC
Q 024040 191 AGRFLKEKNPNIKVYGIEPSE 211 (273)
Q Consensus 191 i~~~~k~~~~~~~vigVe~~~ 211 (273)
+.+.+++.+-++.++++....
T Consensus 206 ~~~~~~~~g~~~p~i~~~g~~ 226 (362)
T 3snr_A 206 PQTTLRERGYNGLIYQTHGAA 226 (362)
T ss_dssp HHHHHHHTTCCSEEEECGGGC
T ss_pred HHHHHHHcCCCccEEeccCcC
Confidence 999999988777777665433
No 397
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=36.57 E-value=1.7e+02 Score=23.85 Aligned_cols=73 Identities=7% Similarity=-0.019 Sum_probs=45.9
Q ss_pred HHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCCCCCCcchHhhhhchHHHHHHhhCCCcCEEEEecCC
Q 024040 106 ERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGT 184 (273)
Q Consensus 106 ~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~~~d~iv~p~G~ 184 (273)
.-.+.+...||+|+.++.+ -+...+.+.++.+......++ +. |-... .....+..++.+++ +.+|.+|--+|.
T Consensus 22 aiA~~la~~Ga~Vv~~~~~--~~~~~~~~~~i~~~g~~~~~~-~~-Dvt~~-~~v~~~~~~~~~~~-G~iDiLVNNAGi 94 (254)
T 4fn4_A 22 AIAKKFALNDSIVVAVELL--EDRLNQIVQELRGMGKEVLGV-KA-DVSKK-KDVEEFVRRTFETY-SRIDVLCNNAGI 94 (254)
T ss_dssp HHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTTCCEEEE-EC-CTTSH-HHHHHHHHHHHHHH-SCCCEEEECCCC
T ss_pred HHHHHHHHcCCEEEEEECC--HHHHHHHHHHHHhcCCcEEEE-Ec-cCCCH-HHHHHHHHHHHHHc-CCCCEEEECCcc
Confidence 4456667789999999853 344445555554443333332 22 22333 34566777888888 589999998883
No 398
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=36.45 E-value=76 Score=26.72 Aligned_cols=52 Identities=13% Similarity=0.036 Sum_probs=30.8
Q ss_pred EEeeCCChHHHHHHHHHHHc---CCeEEEEecCCCCHHH---HHHHHHcCCEEEEeCC
Q 024040 72 LIELTSGNTGIGLAFIAASR---GYKLIIIMPSTYSIER---RIILRALGAEVYLADP 123 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~~---g~~~~i~~p~~~~~~~---~~~~~~~Ga~v~~~~~ 123 (273)
++..++|..+..++..+-.. .-.-.|+++...-... ...++..|++++.++.
T Consensus 64 v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 121 (384)
T 1eg5_A 64 IFFTSCATESINWILKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPV 121 (384)
T ss_dssp EEEESCHHHHHHHHHHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCB
T ss_pred EEEECCHHHHHHHHHHhhhhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEcc
Confidence 77777787787777665541 1112344554333333 2334678999998874
No 399
>3r2j_A Alpha/beta-hydrolase-like protein; nicotinamidase, cytoplasmic; 2.68A {Leishmania infantum}
Probab=36.35 E-value=1.5e+02 Score=23.73 Aligned_cols=54 Identities=15% Similarity=0.159 Sum_probs=38.3
Q ss_pred CeEEEeeCCChHH-HHHHHHHHHcCCeEEEEecCC--CC----HHHHHHHHHcCCEEEEeC
Q 024040 69 KTVLIELTSGNTG-IGLAFIAASRGYKLIIIMPST--YS----IERRIILRALGAEVYLAD 122 (273)
Q Consensus 69 ~~~vv~~ssGN~g-~a~A~~a~~~g~~~~i~~p~~--~~----~~~~~~~~~~Ga~v~~~~ 122 (273)
.+-+|+.-..+.+ .+.|.-|..+|++++|+..-. .+ ..-++.|+..|++|+..+
T Consensus 158 ~~lvv~G~~T~~CV~~Ta~dA~~~Gy~V~Vv~Da~as~~~~~h~~aL~~m~~~g~~v~~s~ 218 (227)
T 3r2j_A 158 RRVFVCGVAYDFCVFFTAMDARKNGFSVVLLEDLTAAVDDAAWSARTAELKDAGVVLLKSS 218 (227)
T ss_dssp CEEEEEESCTTTHHHHHHHHHHHTTCEEEEEEEEECCSCGGGHHHHHHHHHTTTCEEECGG
T ss_pred CEEEEEEeccchHHHHHHHHHHHCCCEEEEEhHhhCCCCHHHHHHHHHHHHHcCCEEEEHH
Confidence 4556666777777 577777999999999886531 12 234777888999987654
No 400
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=36.29 E-value=58 Score=23.92 Aligned_cols=30 Identities=17% Similarity=0.152 Sum_probs=25.3
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 024040 72 LIELTSGNTGIGLAFIAASRGYKLIIIMPS 101 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~ 101 (273)
++....|..|..++......|.+++++-+.
T Consensus 6 vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 6 FIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 666678999999999988889998887654
No 401
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=36.16 E-value=41 Score=28.96 Aligned_cols=31 Identities=16% Similarity=0.150 Sum_probs=27.6
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMPS 101 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~ 101 (273)
.|+...+|-.|.++|...++.|++++|+=..
T Consensus 13 dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~ 43 (379)
T 3alj_A 13 RAEVAGGGFAGLTAAIALKQNGWDVRLHEKS 43 (379)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred eEEEECCCHHHHHHHHHHHHCCCCEEEEecC
Confidence 4889999999999999999999999988643
No 402
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=36.08 E-value=1.7e+02 Score=23.52 Aligned_cols=36 Identities=14% Similarity=0.286 Sum_probs=27.0
Q ss_pred CCcCEEEEecCCCccHHHHHHHHHhhC----CCcEEEEEecC
Q 024040 173 GKVDAFIAGIGTGGTVTGAGRFLKEKN----PNIKVYGIEPS 210 (273)
Q Consensus 173 ~~~d~iv~p~G~Gg~~~Gi~~~~k~~~----~~~~vigVe~~ 210 (273)
++||+||+ .+...+.|+..++++.+ .++.|+|.+-.
T Consensus 185 ~~~~ai~~--~~d~~a~g~~~al~~~g~~vP~di~vvg~d~~ 224 (291)
T 3egc_A 185 DRPTALLT--SSHRITEGAMQALNVLGLRYGPDVEIVSFDNL 224 (291)
T ss_dssp CCCSEEEE--SSHHHHHHHHHHHHHHTCCBTTTBEEEEESCC
T ss_pred CCCcEEEE--CCcHHHHHHHHHHHHcCCCCCCceEEEEecCc
Confidence 46899986 45567779999998876 35788888643
No 403
>3hut_A Putative branched-chain amino acid ABC transporter; extracellular ligand-binding receptor,transport protein; 1.93A {Rhodospirillum rubrum atcc 11170}
Probab=35.90 E-value=1.9e+02 Score=24.01 Aligned_cols=146 Identities=11% Similarity=0.088 Sum_probs=73.6
Q ss_pred HHHHHHHH-HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC--------------CC---H--HHHHHHH
Q 024040 53 YSMIKDAE-DKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPST--------------YS---I--ERRIILR 112 (273)
Q Consensus 53 ~~~~~~a~-~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~--------------~~---~--~~~~~~~ 112 (273)
...+.++. +.+. ..|+-..+.....+++-.+...+++++.+.... .+ . .-.+.+.
T Consensus 61 ~~~~~~l~~~~~v-----~~iig~~~s~~~~~~~~~~~~~~iP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 135 (358)
T 3hut_A 61 RTIARAFVDDPRV-----VGVLGDFSSTVSMAAGSIYGKEGMPQLSPTAAHPDYIKISPWQFRAITTPAFEGPNNAAWMI 135 (358)
T ss_dssp HHHHHHHHHCTTE-----EEEEECSSHHHHHHHHHHHHHHTCCEEESSCCCGGGTTSCTTEEESSCCGGGHHHHHHHHHH
T ss_pred HHHHHHHhccCCc-----EEEEcCCCcHHHHHHHHHHHHCCCcEEecCCCCcccccCCCeEEEecCChHHHHHHHHHHHH
Confidence 34445555 3443 335555555566777778888999987752110 01 1 1234444
Q ss_pred HcCC-EEEEeCCCCCh-hHHHHHHHHHHHhCCCeEeeC-CCCCCcchHhhhhchHHHHHHhhCCCcCEEEEecCCCccHH
Q 024040 113 ALGA-EVYLADPAVGF-EGFVKKGEEILNRTPNGYILG-QFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTGGTVT 189 (273)
Q Consensus 113 ~~Ga-~v~~~~~~~~~-~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~g~~t~~~Ei~~q~~~~~d~iv~p~G~Gg~~~ 189 (273)
..|. +|..+..+..+ .+..+..++..++.+..+... .+. +.. ..+.....+|.+ ..||.||+. +.+..+.
T Consensus 136 ~~g~~~ia~i~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~-~~~--~~~~~~~~~l~~---~~~d~i~~~-~~~~~a~ 208 (358)
T 3hut_A 136 GDGFTSVAVIGVTTDWGLSSAQAFRKAFELRGGAVVVNEEVP-PGN--RRFDDVIDEIED---EAPQAIYLA-MAYEDAA 208 (358)
T ss_dssp HTTCCEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEEEC-TTC--CCCHHHHHHHHH---HCCSEEEEE-SCHHHHH
T ss_pred HcCCCEEEEEecCcHHHHHHHHHHHHHHHHcCCEEEEEEecC-CCC--ccHHHHHHHHHh---cCCCEEEEc-cCchHHH
Confidence 4564 44444322222 223333344444442221110 111 000 112223333333 258988876 4555788
Q ss_pred HHHHHHHhhCCCcEEEEEecC
Q 024040 190 GAGRFLKEKNPNIKVYGIEPS 210 (273)
Q Consensus 190 Gi~~~~k~~~~~~~vigVe~~ 210 (273)
++.+.+++.+.++.+++....
T Consensus 209 ~~~~~~~~~g~~~p~~~~~~~ 229 (358)
T 3hut_A 209 PFLRALRARGSALPVYGSSAL 229 (358)
T ss_dssp HHHHHHHHTTCCCCEEECGGG
T ss_pred HHHHHHHHcCCCCcEEecCcc
Confidence 999999998877888876543
No 404
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=35.72 E-value=40 Score=28.87 Aligned_cols=31 Identities=26% Similarity=0.266 Sum_probs=27.5
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMPS 101 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~ 101 (273)
.|+...+|-.|.++|+..++.|++++|+=..
T Consensus 6 dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~ 36 (397)
T 3cgv_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKR 36 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 4888999999999999999999999888543
No 405
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=35.71 E-value=1e+02 Score=26.83 Aligned_cols=49 Identities=24% Similarity=0.217 Sum_probs=36.7
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC------H----HHHHHHHHcCCEEE
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS------I----ERRIILRALGAEVY 119 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~------~----~~~~~~~~~Ga~v~ 119 (273)
.++...+|+.|.-+|...+++|.+++++.+.... + .-.+.++..|.+++
T Consensus 145 ~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~ 203 (410)
T 3ef6_A 145 RLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRVLGRRIGAWLRGLLTELGVQVE 203 (410)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHHHHCHHHHHHHHHHHHHHTCEEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchhhcCHHHHHHHHHHHHHCCCEEE
Confidence 3888899999999999999999999999875421 1 12344566677765
No 406
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=35.69 E-value=1.7e+02 Score=23.59 Aligned_cols=34 Identities=18% Similarity=0.300 Sum_probs=27.5
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPST 102 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~ 102 (273)
...+||..+|--|.++|..-.+.|.+++++-...
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~ 45 (271)
T 3tzq_B 12 KVAIITGACGGIGLETSRVLARAGARVVLADLPE 45 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4558888888899999999999999987766543
No 407
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=35.66 E-value=1.7e+02 Score=23.56 Aligned_cols=48 Identities=17% Similarity=0.130 Sum_probs=33.3
Q ss_pred hHHHHHHhhCCCcCEEEEecCCCccHHHHHHHHHhhCC---CcEEEEEecCC
Q 024040 163 TGPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNP---NIKVYGIEPSE 211 (273)
Q Consensus 163 ~~~Ei~~q~~~~~d~iv~p~G~Gg~~~Gi~~~~k~~~~---~~~vigVe~~~ 211 (273)
.+.+++++- +++|++++-+.+-..+.|+..++++.+. ++.|+|.+-..
T Consensus 185 ~~~~~l~~~-~~~~a~~i~~~nD~~A~g~~~al~~~g~~v~di~vvG~D~~~ 235 (306)
T 8abp_A 185 AANSMLVQH-PEVKHWLIVGMNDSTVLGGVRATEGQGFKAADIIGIGINGVD 235 (306)
T ss_dssp HHHHHHTTC-TTCSEEEEECSSHHHHHHHHHHHHHTTCCGGGEEEEEESSGG
T ss_pred HHHHHHHhC-CCCceEEEEeCCcHHHHHHHHHHHHcCCCCCceEEEEeCcHH
Confidence 444555543 5688855555667788899999998874 68888886443
No 408
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=35.65 E-value=1.8e+02 Score=23.66 Aligned_cols=25 Identities=24% Similarity=0.381 Sum_probs=17.4
Q ss_pred hchHHHHHHhhCCCcCEEEEecCCCc
Q 024040 161 ETTGPEIWNDSGGKVDAFIAGIGTGG 186 (273)
Q Consensus 161 ~t~~~Ei~~q~~~~~d~iv~p~G~Gg 186 (273)
..+..++.+++ +.+|.+|..+|..+
T Consensus 79 ~~~~~~~~~~~-g~iD~lv~nAg~~~ 103 (311)
T 3o26_A 79 SSLADFIKTHF-GKLDILVNNAGVAG 103 (311)
T ss_dssp HHHHHHHHHHH-SSCCEEEECCCCCS
T ss_pred HHHHHHHHHhC-CCCCEEEECCcccc
Confidence 44555666666 57899999988654
No 409
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=35.59 E-value=1.2e+02 Score=25.74 Aligned_cols=53 Identities=23% Similarity=0.125 Sum_probs=33.1
Q ss_pred EEeeCCChHHHHHHHHHHH------cCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC
Q 024040 72 LIELTSGNTGIGLAFIAAS------RGYKLIIIMPSTYSIERRIILRALGAEVYLADPA 124 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~------~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~ 124 (273)
.+..++|..+..+|..+-+ .+-.-.|+++...-......++..|++++.++.+
T Consensus 52 ~i~~~sGt~a~~~al~~~~~~~~~~~~~g~~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~ 110 (390)
T 3b8x_A 52 AVMVSSGSTANLLMIAALFFTKKPRLKKGDEIIVPAVSWSTTYYPLQQYGLRVKFVDID 110 (390)
T ss_dssp EEEESCHHHHHHHHHHHTTSSSSCSCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBC
T ss_pred EEEECCHHHHHHHHHHHHHhhhhcCCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEecC
Confidence 5666777666655554431 2222355666655666677778899999888743
No 410
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=35.51 E-value=1.6e+02 Score=23.07 Aligned_cols=52 Identities=25% Similarity=0.183 Sum_probs=34.8
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHH----HHHH-cCCEEEEeCC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRI----ILRA-LGAEVYLADP 123 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~----~~~~-~Ga~v~~~~~ 123 (273)
...+|+..+|.-|.++|....+.|.+++++... ..+.+ .++. .|.++..+..
T Consensus 8 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~~ 64 (248)
T 2pnf_A 8 KVSLVTGSTRGIGRAIAEKLASAGSTVIITGTS---GERAKAVAEEIANKYGVKAHGVEM 64 (248)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHHHHHHHCCCEEEEEC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC---hHHHHHHHHHHHhhcCCceEEEEc
Confidence 455788888999999999988899988777653 22222 2222 4666665543
No 411
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=35.50 E-value=1.7e+02 Score=23.33 Aligned_cols=44 Identities=16% Similarity=0.216 Sum_probs=32.0
Q ss_pred hHHHHHHhhCCCcCEEEEecCCCccHHHHHHHHHhhC----CCcEEEEEec
Q 024040 163 TGPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKN----PNIKVYGIEP 209 (273)
Q Consensus 163 ~~~Ei~~q~~~~~d~iv~p~G~Gg~~~Gi~~~~k~~~----~~~~vigVe~ 209 (273)
...+++++- ++||+||+. +..++.|+..++++.+ .++.|+|.+-
T Consensus 166 ~~~~~l~~~-~~~~ai~~~--~d~~a~g~~~al~~~g~~vP~di~vvg~d~ 213 (280)
T 3gyb_A 166 ETLALLKEH-PEVTAIFSS--NDITAIGALGAARELGLRVPEDLSIIGYDN 213 (280)
T ss_dssp HHHHHHHHC-TTCCEEEES--SHHHHHHHHHHHHHHTCCTTTTCEEEEESC
T ss_pred HHHHHHhCC-CCCCEEEEC--ChHHHHHHHHHHHHcCCCCCCeeEEEEECC
Confidence 445555553 579999975 4567789999999887 3578888864
No 412
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=35.43 E-value=1.6e+02 Score=23.18 Aligned_cols=46 Identities=15% Similarity=0.188 Sum_probs=32.3
Q ss_pred hHHHHHHhhCCCcCEEEEecCCCccHHHHHHHHHhhC---CCcEEEEEecC
Q 024040 163 TGPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKN---PNIKVYGIEPS 210 (273)
Q Consensus 163 ~~~Ei~~q~~~~~d~iv~p~G~Gg~~~Gi~~~~k~~~---~~~~vigVe~~ 210 (273)
...+++++-+.+||+||+. +...+.|+..++++.+ .++.|+|.+-.
T Consensus 169 ~~~~~l~~~~~~~~ai~~~--~d~~a~g~~~al~~~g~vp~di~vvg~d~~ 217 (272)
T 3o74_A 169 LMQQLIDDLGGLPDALVTT--SYVLLQGVFDTLQARPVDSRQLQLGTFGDN 217 (272)
T ss_dssp HHHHHHHHHTSCCSEEEES--SHHHHHHHHHHHHTSCGGGCCCEEEEESCC
T ss_pred HHHHHHhcCCCCCcEEEEe--CchHHHHHHHHHHHcCCCccceEEEEeCCh
Confidence 3445555542268999885 5567789999999887 46888887643
No 413
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=35.39 E-value=65 Score=23.40 Aligned_cols=27 Identities=15% Similarity=0.194 Sum_probs=21.0
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEE
Q 024040 72 LIELTSGNTGIGLAFIAASRGYKLIII 98 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~~g~~~~i~ 98 (273)
+....+|+.|.+++...+..|.+++++
T Consensus 24 v~iiG~G~iG~~~a~~l~~~g~~v~v~ 50 (144)
T 3oj0_A 24 ILLVGNGMLASEIAPYFSYPQYKVTVA 50 (144)
T ss_dssp EEEECCSHHHHHHGGGCCTTTCEEEEE
T ss_pred EEEECCCHHHHHHHHHHHhCCCEEEEE
Confidence 777778999999998887788883333
No 414
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=35.33 E-value=1e+02 Score=24.80 Aligned_cols=48 Identities=15% Similarity=0.177 Sum_probs=37.0
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCC--CCHHHHHHHHHcCCEEE
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMPST--YSIERRIILRALGAEVY 119 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~--~~~~~~~~~~~~Ga~v~ 119 (273)
.++...+|+.|.-+|...+.+| +++++.+.. .+....+.++..|.+++
T Consensus 143 ~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~~~~~~~~~~l~~~gv~i~ 192 (297)
T 3fbs_A 143 KIGVIAASPMAIHHALMLPDWG-ETTFFTNGIVEPDADQHALLAARGVRVE 192 (297)
T ss_dssp EEEEECCSTTHHHHHHHGGGTS-EEEEECTTTCCCCHHHHHHHHHTTCEEE
T ss_pred EEEEEecCccHHHHHHHhhhcC-cEEEEECCCCCCCHHHHHHHHHCCcEEE
Confidence 3788899999999999998889 988887643 45555666666777765
No 415
>3hu5_A Isochorismatase family protein; structural genomics, protein structure INI NEW YORK structural genomix research consortium, nysgxrc; 1.50A {Desulfovibrio vulgaris}
Probab=35.29 E-value=1e+02 Score=24.20 Aligned_cols=60 Identities=18% Similarity=0.207 Sum_probs=40.9
Q ss_pred HHHcCCCCCCCeEEEeeCCChHH-HHHHHHHHHcCCeEEEEecC--CCCH----HHHHHHHHcCCEEEEeC
Q 024040 59 AEDKGLITPGKTVLIELTSGNTG-IGLAFIAASRGYKLIIIMPS--TYSI----ERRIILRALGAEVYLAD 122 (273)
Q Consensus 59 a~~~g~~~~g~~~vv~~ssGN~g-~a~A~~a~~~g~~~~i~~p~--~~~~----~~~~~~~~~Ga~v~~~~ 122 (273)
+.+.|. ++-+++.-..|.+ .+.|.-|..+|++++|+..- ..++ .-++.|+..|++|+..+
T Consensus 121 L~~~gi----~~lvi~G~~T~~CV~~Ta~da~~~Gy~V~vv~Da~as~~~~~h~~al~~m~~~g~~v~tt~ 187 (204)
T 3hu5_A 121 LRRRGV----DTLLVSGTQYPNCIRGTAVDAFALDYDVVVVTDACSARTPGVAESNINDMRAMGITCVPLT 187 (204)
T ss_dssp HHHTTC----CEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECSSHHHHHHHHHHHHHHTCEEECGG
T ss_pred HHhCCC----CeEEEeeeccchHHHHHHHHHHHCCCEEEEehhhhCCCCHHHHHHHHHHHHHhCCEEEEHH
Confidence 344565 5545666666766 57777799999999988763 2222 23667888899987664
No 416
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=35.28 E-value=39 Score=28.20 Aligned_cols=29 Identities=14% Similarity=0.233 Sum_probs=26.3
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 024040 72 LIELTSGNTGIGLAFIAASRGYKLIIIMP 100 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~~g~~~~i~~p 100 (273)
|+...+|-.|.++|+..++.|++++|+=.
T Consensus 5 V~IIGaG~~Gl~~A~~L~~~G~~V~vlE~ 33 (336)
T 1yvv_A 5 IAIIGTGIAGLSAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred EEEECCcHHHHHHHHHHHHCCCcEEEEEC
Confidence 88889999999999999999999888754
No 417
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=35.27 E-value=1.7e+02 Score=23.62 Aligned_cols=86 Identities=14% Similarity=0.111 Sum_probs=48.0
Q ss_pred eEEEEecCCC--CHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHH-hCCCeEeeCCCCCCcchHhhhhchHHHHHHh
Q 024040 94 KLIIIMPSTY--SIERRIILRALGAEVYLADPAVGFEGFVKKGEEILN-RTPNGYILGQFENPANPEIHYETTGPEIWND 170 (273)
Q Consensus 94 ~~~i~~p~~~--~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~-~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q 170 (273)
+.++|.-..- -..-.+.+...|++|+.++.+ .+...+...++.+ ......++ +. |.... .....+..++.++
T Consensus 21 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~~-~~-Dv~~~-~~v~~~~~~~~~~ 95 (266)
T 4egf_A 21 KRALITGATKGIGADIARAFAAAGARLVLSGRD--VSELDAARRALGEQFGTDVHTV-AI-DLAEP-DAPAELARRAAEA 95 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHHCCCEEEE-EC-CTTST-THHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC--HHHHHHHHHHHHHhcCCcEEEE-Ee-cCCCH-HHHHHHHHHHHHH
Confidence 4555544321 234566777789999998753 3333444444443 22233332 22 12222 2344566677777
Q ss_pred hCCCcCEEEEecCCC
Q 024040 171 SGGKVDAFIAGIGTG 185 (273)
Q Consensus 171 ~~~~~d~iv~p~G~G 185 (273)
+ +.+|.+|..+|..
T Consensus 96 ~-g~id~lv~nAg~~ 109 (266)
T 4egf_A 96 F-GGLDVLVNNAGIS 109 (266)
T ss_dssp H-TSCSEEEEECCCC
T ss_pred c-CCCCEEEECCCcC
Confidence 7 5799999998864
No 418
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=35.22 E-value=69 Score=27.56 Aligned_cols=51 Identities=20% Similarity=0.224 Sum_probs=35.8
Q ss_pred EEeeCC-ChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHH----HcCCEEEEeC
Q 024040 72 LIELTS-GNTGIGLAFIAASRGYKLIIIMPSTY--SIERRIILR----ALGAEVYLAD 122 (273)
Q Consensus 72 vv~~ss-GN~g~a~A~~a~~~g~~~~i~~p~~~--~~~~~~~~~----~~Ga~v~~~~ 122 (273)
|+.... .|.+.|++.+++++|++++++.|+.- ++.-.+.++ ..|+++..+.
T Consensus 158 va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~ 215 (321)
T 1oth_A 158 LSWIGDGNNILHSIMMSAAKFGMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLLTN 215 (321)
T ss_dssp EEEESCSSHHHHHHHTTTGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEES
T ss_pred EEEECCchhhHHHHHHHHHHcCCeEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEE
Confidence 444444 57899999999999999999999864 343333333 4688877664
No 419
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=35.13 E-value=1.4e+02 Score=23.46 Aligned_cols=49 Identities=27% Similarity=0.303 Sum_probs=34.1
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 024040 70 TVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADP 123 (273)
Q Consensus 70 ~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~ 123 (273)
+.+|+..+|.-|.++|......|.+++++.... ... .+..|+..+.++-
T Consensus 4 ~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~--~~~---~~~~~~~~~~~D~ 52 (239)
T 2ekp_A 4 KALVTGGSRGIGRAIAEALVARGYRVAIASRNP--EEA---AQSLGAVPLPTDL 52 (239)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC--HHH---HHHHTCEEEECCT
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH--HHH---HHhhCcEEEecCC
Confidence 458888889999999999889999887766542 211 2223666666653
No 420
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=34.74 E-value=43 Score=28.59 Aligned_cols=32 Identities=13% Similarity=0.186 Sum_probs=28.0
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 024040 70 TVLIELTSGNTGIGLAFIAASRGYKLIIIMPS 101 (273)
Q Consensus 70 ~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~ 101 (273)
..|+...+|-.|.++|+..++.|++++|+=..
T Consensus 18 ~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~ 49 (382)
T 1ryi_A 18 YEAVVIGGGIIGSAIAYYLAKENKNTALFESG 49 (382)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCC
Confidence 45888999999999999999999999988643
No 421
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=34.69 E-value=43 Score=28.99 Aligned_cols=31 Identities=16% Similarity=0.345 Sum_probs=27.7
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMPS 101 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~ 101 (273)
.|+...+|-.|.++|...++.|++++|+=..
T Consensus 8 dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~ 38 (399)
T 2x3n_A 8 DVLINGCGIGGAMLAYLLGRQGHRVVVVEQA 38 (399)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHhCCCcEEEEeCC
Confidence 4888999999999999999999999988643
No 422
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=34.63 E-value=1.4e+02 Score=24.32 Aligned_cols=86 Identities=13% Similarity=0.158 Sum_probs=49.5
Q ss_pred eEEEEecCCC--CHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCC-CeEeeCCCCCCcchHhhhhchHHHHHHh
Q 024040 94 KLIIIMPSTY--SIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTP-NGYILGQFENPANPEIHYETTGPEIWND 170 (273)
Q Consensus 94 ~~~i~~p~~~--~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~g~~t~~~Ei~~q 170 (273)
+.++|.-..- -..-.+.+...|++|+.++.+ .+...+.+.++.++.+ ...++ +. |.... .....+..++.++
T Consensus 28 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~-~~-Dv~~~-~~v~~~~~~~~~~ 102 (277)
T 4fc7_A 28 KVAFITGGGSGIGFRIAEIFMRHGCHTVIASRS--LPRVLTAARKLAGATGRRCLPL-SM-DVRAP-PAVMAAVDQALKE 102 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESC--HHHHHHHHHHHHHHHSSCEEEE-EC-CTTCH-HHHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC--HHHHHHHHHHHHHhcCCcEEEE-Ec-CCCCH-HHHHHHHHHHHHH
Confidence 5555554432 234566777789999998753 3334444445443322 33332 22 22223 2455667777788
Q ss_pred hCCCcCEEEEecCCC
Q 024040 171 SGGKVDAFIAGIGTG 185 (273)
Q Consensus 171 ~~~~~d~iv~p~G~G 185 (273)
+ +.+|.+|..+|..
T Consensus 103 ~-g~id~lv~nAg~~ 116 (277)
T 4fc7_A 103 F-GRIDILINCAAGN 116 (277)
T ss_dssp H-SCCCEEEECCCCC
T ss_pred c-CCCCEEEECCcCC
Confidence 7 5799999998843
No 423
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=34.62 E-value=2.3e+02 Score=24.66 Aligned_cols=77 Identities=9% Similarity=-0.022 Sum_probs=43.8
Q ss_pred CCCchhhHHHHHHHHHHHHcCC--CCCCCeEEEeeCCChHHHHHHHHHHHc--CCeEEEEecCCCCHHHHHHHHHcCCEE
Q 024040 43 PCSSVKDRIAYSMIKDAEDKGL--ITPGKTVLIELTSGNTGIGLAFIAASR--GYKLIIIMPSTYSIERRIILRALGAEV 118 (273)
Q Consensus 43 ptGS~K~R~a~~~~~~a~~~g~--~~~g~~~vv~~ssGN~g~a~A~~a~~~--g~~~~i~~p~~~~~~~~~~~~~~Ga~v 118 (273)
+.|.-..|-+..-.. ...+. +.++...++..++|+.+..++..+-.. . +.++ +|.-+=..-...++..|+++
T Consensus 71 ~~G~~~lr~aia~~~--~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vl-v~~P~y~~~~~~~~~~g~~~ 146 (405)
T 3k7y_A 71 GNGTEDFSTLTQNLI--FGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLY-VTNPPYINHVNMIESRGFNL 146 (405)
T ss_dssp TSSCHHHHHHHHHHH--HCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEE-EESSCCHHHHHHHHTTTCEE
T ss_pred CCCcHHHHHHHHHHH--cCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEE-EeCCCCHhHHHHHHHcCCeE
Confidence 357666675443322 22221 122221256667778887777655443 5 5444 44434445567788899999
Q ss_pred EEeCC
Q 024040 119 YLADP 123 (273)
Q Consensus 119 ~~~~~ 123 (273)
+.++-
T Consensus 147 ~~v~~ 151 (405)
T 3k7y_A 147 KYINF 151 (405)
T ss_dssp EEECC
T ss_pred EEEec
Confidence 98863
No 424
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=34.58 E-value=95 Score=27.34 Aligned_cols=52 Identities=13% Similarity=-0.023 Sum_probs=36.7
Q ss_pred EEeeCCChHHHHHHHHHHH---------cCC---eEEEEecCCCCHHHHHHHHHcCCEEEEeCCC
Q 024040 72 LIELTSGNTGIGLAFIAAS---------RGY---KLIIIMPSTYSIERRIILRALGAEVYLADPA 124 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~---------~g~---~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~ 124 (273)
++..++|..+..+|..+.+ -|+ +-.|++|. .-..-.+.++.+|++++.++.+
T Consensus 106 ~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~~ 169 (452)
T 2dgk_A 106 GTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMR 169 (452)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCCB
T ss_pred eEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEecC
Confidence 6667777777777665432 453 23667787 7777777888899999999753
No 425
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=34.55 E-value=2.2e+02 Score=24.51 Aligned_cols=105 Identities=13% Similarity=0.119 Sum_probs=66.3
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCCC
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQF 150 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 150 (273)
+|....-|+.|.++|..++.+|++++.+-+...+... .+..|++. +. +. .++.++. +...++--
T Consensus 166 tvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~---~~~~g~~~--~~---~l-------~ell~~a-DvV~l~~P 229 (351)
T 3jtm_A 166 TIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPEL---EKETGAKF--VE---DL-------NEMLPKC-DVIVINMP 229 (351)
T ss_dssp EEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHH---HHHHCCEE--CS---CH-------HHHGGGC-SEEEECSC
T ss_pred EEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHH---HHhCCCeE--cC---CH-------HHHHhcC-CEEEECCC
Confidence 4888899999999999999999997776554333333 33457643 21 12 2334444 55554332
Q ss_pred CCCcchHhhhhchHHHHHHhhCCCcCEEEEecCCCccHH--HHHHHHHh
Q 024040 151 ENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTGGTVT--GAGRFLKE 197 (273)
Q Consensus 151 ~~~~~~~~g~~t~~~Ei~~q~~~~~d~iv~p~G~Gg~~~--Gi~~~~k~ 197 (273)
.++.. ...+..+.+.++ +++.+++-++.|+..- .+..++++
T Consensus 230 lt~~t----~~li~~~~l~~m--k~gailIN~aRG~~vde~aL~~aL~~ 272 (351)
T 3jtm_A 230 LTEKT----RGMFNKELIGKL--KKGVLIVNNARGAIMERQAVVDAVES 272 (351)
T ss_dssp CCTTT----TTCBSHHHHHHS--CTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred CCHHH----HHhhcHHHHhcC--CCCCEEEECcCchhhCHHHHHHHHHh
Confidence 23322 234566788888 5789999999998753 44445544
No 426
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=34.48 E-value=1.9e+02 Score=23.60 Aligned_cols=32 Identities=22% Similarity=0.273 Sum_probs=25.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMP 100 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p 100 (273)
...+||..+|--|.++|....+.|.++++.-.
T Consensus 26 k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 26 KTAVITGSTSGIGLAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEECC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 34588888888999999988888988766543
No 427
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=34.46 E-value=2.2e+02 Score=24.39 Aligned_cols=105 Identities=21% Similarity=0.155 Sum_probs=63.8
Q ss_pred EEEeeCCChHHHHHHHHHH-HcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCC
Q 024040 71 VLIELTSGNTGIGLAFIAA-SRGYKLIIIMPSTYSIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQ 149 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~-~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 149 (273)
+|.....|+.|.++|..++ .+|++++++-+....... ...+|++. +. +.++ +.++. +.+.+.-
T Consensus 165 ~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~---~~~~g~~~--~~---~l~e-------ll~~a-DvVil~v 228 (348)
T 2w2k_A 165 VLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAET---EKALGAER--VD---SLEE-------LARRS-DCVSVSV 228 (348)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHH---HHHHTCEE--CS---SHHH-------HHHHC-SEEEECC
T ss_pred EEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhh---HhhcCcEE--eC---CHHH-------HhccC-CEEEEeC
Confidence 4777789999999999999 999998776554333322 23456653 21 1222 22333 4555433
Q ss_pred CCCCcchHhhhhchHHHHHHhhCCCcCEEEEecCCCccH--HHHHHHHHh
Q 024040 150 FENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTGGTV--TGAGRFLKE 197 (273)
Q Consensus 150 ~~~~~~~~~g~~t~~~Ei~~q~~~~~d~iv~p~G~Gg~~--~Gi~~~~k~ 197 (273)
..++. -...+..+++..+ +++.+++-+++|+.. ..+..+++.
T Consensus 229 p~~~~----t~~li~~~~l~~m--k~gailin~srg~~vd~~aL~~aL~~ 272 (348)
T 2w2k_A 229 PYMKL----THHLIDEAFFAAM--KPGSRIVNTARGPVISQDALIAALKS 272 (348)
T ss_dssp CCSGG----GTTCBCHHHHHHS--CTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred CCChH----HHHHhhHHHHhcC--CCCCEEEECCCCchhCHHHHHHHHHh
Confidence 22221 1223444677777 468899999999553 566667665
No 428
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=34.35 E-value=95 Score=25.62 Aligned_cols=29 Identities=24% Similarity=0.313 Sum_probs=25.1
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 024040 72 LIELTSGNTGIGLAFIAASRGYKLIIIMP 100 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~~g~~~~i~~p 100 (273)
|.....|+.|.++|..+++.|++++++-+
T Consensus 7 V~VIGaG~mG~~iA~~la~~G~~V~l~d~ 35 (283)
T 4e12_A 7 VTVLGTGVLGSQIAFQTAFHGFAVTAYDI 35 (283)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEeC
Confidence 66668899999999999999999888743
No 429
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=34.35 E-value=94 Score=24.96 Aligned_cols=72 Identities=14% Similarity=0.183 Sum_probs=41.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH--HHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHHh
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSI--ERRIILRALGAEVYLADPA-VGFEGFVKKGEEILNR 140 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~--~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 140 (273)
.+.+||..+|--|.++|..-...|.+++++....... ...+.++..|.++..+..+ .+.++..+...+..++
T Consensus 8 k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 82 (264)
T 3i4f_A 8 RHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSH 82 (264)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 3457777778888999988888899988875543211 1122333456666555432 2233344444444333
No 430
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=34.27 E-value=47 Score=28.50 Aligned_cols=30 Identities=13% Similarity=0.321 Sum_probs=26.0
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMP 100 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p 100 (273)
+|....+|-.|+.++++|+++|++++++-+
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~ 32 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDK 32 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 367778889999999999999999998854
No 431
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=34.24 E-value=1.8e+02 Score=23.37 Aligned_cols=32 Identities=13% Similarity=0.279 Sum_probs=26.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMP 100 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p 100 (273)
...+||..+|--|.++|....+.|.+++++..
T Consensus 12 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r 43 (276)
T 1mxh_A 12 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYR 43 (276)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 34578888888999999998889999887765
No 432
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=34.19 E-value=1.6e+02 Score=23.98 Aligned_cols=68 Identities=9% Similarity=0.130 Sum_probs=38.9
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHcCCEEEEeCCC-CChhHHHHHHHHHHHh
Q 024040 70 TVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRI-ILRALGAEVYLADPA-VGFEGFVKKGEEILNR 140 (273)
Q Consensus 70 ~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~-~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 140 (273)
..+||..+|--|.++|..-.+.|.+++++-.. ..+.+ ..+.++.++..+..+ .+.++..+...+..++
T Consensus 30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 99 (272)
T 4dyv_A 30 IAIVTGAGSGVGRAVAVALAGAGYGVALAGRR---LDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEK 99 (272)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHH
Confidence 44777778888999999888899987776543 23332 233345555444322 2233444444444333
No 433
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=34.12 E-value=46 Score=28.89 Aligned_cols=46 Identities=15% Similarity=0.119 Sum_probs=34.8
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-----------CCHHHHHHHHHcCC
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMPST-----------YSIERRIILRALGA 116 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~-----------~~~~~~~~~~~~Ga 116 (273)
.|+...+|-.|.++|...++.|++++|+=... ..+.-.+.++.+|.
T Consensus 7 ~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~ 63 (397)
T 2vou_A 7 RIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGV 63 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTC
T ss_pred cEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCC
Confidence 48889999999999999999999999985421 13444566666653
No 434
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=34.12 E-value=88 Score=24.59 Aligned_cols=33 Identities=15% Similarity=0.212 Sum_probs=26.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcC--CeEEEEecC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRG--YKLIIIMPS 101 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g--~~~~i~~p~ 101 (273)
.+.+|+..+|.-|.++|......| .+++++...
T Consensus 4 k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~ 38 (250)
T 1yo6_A 4 GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARD 38 (250)
T ss_dssp SEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESS
T ss_pred CEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecC
Confidence 345788888889999999888889 888777654
No 435
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=34.03 E-value=75 Score=25.44 Aligned_cols=32 Identities=13% Similarity=0.084 Sum_probs=26.4
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMP 100 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p 100 (273)
...+|+..+|.-|.++|......|.+++++..
T Consensus 8 k~vlITGasggiG~~la~~l~~~G~~V~~~~r 39 (264)
T 2pd6_A 8 ALALVTGAGSGIGRAVSVRLAGEGATVAACDL 39 (264)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 45588888899999999998889998777654
No 436
>3hba_A Putative phosphosugar isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE CIT; 2.00A {Shewanella denitrificans OS217}
Probab=33.87 E-value=1.7e+02 Score=24.95 Aligned_cols=23 Identities=4% Similarity=-0.029 Sum_probs=14.7
Q ss_pred CeEEEeeCCChHHHHHHHHHHHc
Q 024040 69 KTVLIELTSGNTGIGLAFIAASR 91 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~ 91 (273)
...++..++-|++.|.=.+++..
T Consensus 205 ~~~~~lG~G~~~~~A~E~ALKlk 227 (334)
T 3hba_A 205 KNLVVLGRGFGYAVSKEIALKLK 227 (334)
T ss_dssp CEEEEEECTHHHHHHHHHHHHHH
T ss_pred CeEEEEeCCcCHHHHHHHHHHHH
Confidence 34455667777887776666653
No 437
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=33.76 E-value=86 Score=27.64 Aligned_cols=49 Identities=14% Similarity=0.239 Sum_probs=36.3
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCC------CCHH----HHHHHHHcCCEEE
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMPST------YSIE----RRIILRALGAEVY 119 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~------~~~~----~~~~~~~~Ga~v~ 119 (273)
.++...+|+.|.-+|...++.|.+++++.+.. .++. -.+.++..|.+++
T Consensus 151 ~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~ 209 (431)
T 1q1r_A 151 RLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAGVDIR 209 (431)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHHTCEEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccchhhHHHHHHHHHHHHhCCeEEE
Confidence 38888999999999999999999999987542 1222 2345666777665
No 438
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=33.70 E-value=2e+02 Score=23.56 Aligned_cols=74 Identities=18% Similarity=0.148 Sum_probs=46.9
Q ss_pred HHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCCCCCCcchHhhhhchHHHHHHhhCCCcCEEEEecCCC
Q 024040 106 ERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTG 185 (273)
Q Consensus 106 ~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~~~d~iv~p~G~G 185 (273)
.-.+.+...||+|+.++.+ -+...+.+.++.+...+..++ +. |-... .....+..++.+++ +.+|.+|-.+|..
T Consensus 24 aia~~la~~Ga~Vvi~~~~--~~~~~~~~~~l~~~g~~~~~~-~~-Dv~~~-~~v~~~~~~~~~~~-G~iDiLVNNAG~~ 97 (255)
T 4g81_D 24 AYAEGLAAAGARVILNDIR--ATLLAESVDTLTRKGYDAHGV-AF-DVTDE-LAIEAAFSKLDAEG-IHVDILINNAGIQ 97 (255)
T ss_dssp HHHHHHHHTTCEEEECCSC--HHHHHHHHHHHHHTTCCEEEC-CC-CTTCH-HHHHHHHHHHHHTT-CCCCEEEECCCCC
T ss_pred HHHHHHHHCCCEEEEEECC--HHHHHHHHHHHHhcCCcEEEE-Ee-eCCCH-HHHHHHHHHHHHHC-CCCcEEEECCCCC
Confidence 4566777899999999853 344445556665554333333 33 22233 34566677888887 5799999988743
No 439
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=33.67 E-value=89 Score=26.55 Aligned_cols=51 Identities=12% Similarity=0.092 Sum_probs=31.2
Q ss_pred EEEeeCCChHHHHHHHHHHH-cCCeEEEEecCCCCHH--HHHHHHHcCCEEEEeCC
Q 024040 71 VLIELTSGNTGIGLAFIAAS-RGYKLIIIMPSTYSIE--RRIILRALGAEVYLADP 123 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~-~g~~~~i~~p~~~~~~--~~~~~~~~Ga~v~~~~~ 123 (273)
.++..++|..+..++..+-. -|-+ |+++...-.. -...++..|++++.++.
T Consensus 87 ~v~~t~g~t~al~~~~~~~~~~gd~--Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~ 140 (393)
T 1vjo_A 87 TIAVSGTGTAAMEATIANAVEPGDV--VLIGVAGYFGNRLVDMAGRYGADVRTISK 140 (393)
T ss_dssp EEEESSCHHHHHHHHHHHHCCTTCE--EEEEESSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEeCchHHHHHHHHHhccCCCCE--EEEEcCChhHHHHHHHHHHcCCceEEEec
Confidence 37777888788777666542 2333 3333322222 45567789999998874
No 440
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=33.67 E-value=1.8e+02 Score=23.16 Aligned_cols=70 Identities=13% Similarity=0.051 Sum_probs=36.7
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHHh
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPA-VGFEGFVKKGEEILNR 140 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~-~~~~~~~~~a~~~~~~ 140 (273)
...+||..+|--|.++|..-.+.|.+++++-....... +..+.+|.++..+..+ .+.++..+...+..++
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 78 (257)
T 3tpc_A 8 RVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGE--EPAAELGAAVRFRNADVTNEADATAALAFAKQE 78 (257)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC--------------CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH--HHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 45588888888999999998899999887765432211 1222345555554432 2233333344444333
No 441
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=33.56 E-value=1.5e+02 Score=24.71 Aligned_cols=31 Identities=23% Similarity=0.278 Sum_probs=26.3
Q ss_pred eEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 024040 70 TVLIELTSGNTGIGLAFIAASRGYKLIIIMP 100 (273)
Q Consensus 70 ~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p 100 (273)
+.+|+..+|.-|.+++......|.+++++..
T Consensus 4 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r 34 (348)
T 1ek6_A 4 KVLVTGGAGYIGSHTVLELLEAGYLPVVIDN 34 (348)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEec
Confidence 4578888999999999998888999888764
No 442
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=33.51 E-value=1e+02 Score=23.91 Aligned_cols=49 Identities=10% Similarity=-0.012 Sum_probs=34.0
Q ss_pred EEEeeCCChHHHHHHHHHH-HcCCeEEEEecCCCCHH-HHHHHHHcCCEEEEeC
Q 024040 71 VLIELTSGNTGIGLAFIAA-SRGYKLIIIMPSTYSIE-RRIILRALGAEVYLAD 122 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~-~~g~~~~i~~p~~~~~~-~~~~~~~~Ga~v~~~~ 122 (273)
.+|+..+|.-|.+++.... ..|.+++++... +. +.+.+...+.++..+.
T Consensus 8 vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~---~~~~~~~~~~~~~~~~~~~ 58 (221)
T 3r6d_A 8 ITILGAAGQIAQXLTATLLTYTDMHITLYGRQ---LKTRIPPEIIDHERVTVIE 58 (221)
T ss_dssp EEEESTTSHHHHHHHHHHHHHCCCEEEEEESS---HHHHSCHHHHTSTTEEEEE
T ss_pred EEEEeCCcHHHHHHHHHHHhcCCceEEEEecC---ccccchhhccCCCceEEEE
Confidence 4788889999999999988 899998887653 33 4444432344444443
No 443
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=33.42 E-value=65 Score=24.95 Aligned_cols=37 Identities=14% Similarity=-0.024 Sum_probs=29.2
Q ss_pred CCCCCCeEEEeeCCChHH--HHHHHHHHHcCCeEEEEec
Q 024040 64 LITPGKTVLIELTSGNTG--IGLAFIAASRGYKLIIIMP 100 (273)
Q Consensus 64 ~~~~g~~~vv~~ssGN~g--~a~A~~a~~~g~~~~i~~p 100 (273)
.++|++.-++.+.||+.. +.+|..++..|++++.+.+
T Consensus 74 ~i~~~D~vii~S~Sg~n~~~ie~A~~ake~G~~vIaITs 112 (170)
T 3jx9_A 74 TLHAVDRVLIFTPDTERSDLLASLARYDAWHTPYSIITL 112 (170)
T ss_dssp CCCTTCEEEEEESCSCCHHHHHHHHHHHHHTCCEEEEES
T ss_pred CCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCcEEEEeC
Confidence 677888756666566554 7778889999999999998
No 444
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=33.32 E-value=41 Score=29.23 Aligned_cols=31 Identities=19% Similarity=0.343 Sum_probs=27.6
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMPS 101 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~ 101 (273)
.|+...+|-.|.++|+..++.|++++|+=..
T Consensus 7 dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~ 37 (421)
T 3nix_A 7 DVLVIGAGPAGTVAASLVNKSGFKVKIVEKQ 37 (421)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred cEEEECCCHHHHHHHHHHHhCCCCEEEEeCC
Confidence 4888999999999999999999999988554
No 445
>1yac_A Ycacgp, YCAC gene product; unknown bacterial hydrolase, three layer alpha-beta-alpha SA topology, ENTB homolog, cshase homolog; 1.80A {Escherichia coli} SCOP: c.33.1.3
Probab=33.20 E-value=92 Score=24.60 Aligned_cols=59 Identities=14% Similarity=0.118 Sum_probs=38.6
Q ss_pred HHHcCCCCCCCeEEEeeCCChHH-HHHHHHHHHcCCeEEEEecCCC--CHH----HHHHHHHcCCEEEEe
Q 024040 59 AEDKGLITPGKTVLIELTSGNTG-IGLAFIAASRGYKLIIIMPSTY--SIE----RRIILRALGAEVYLA 121 (273)
Q Consensus 59 a~~~g~~~~g~~~vv~~ssGN~g-~a~A~~a~~~g~~~~i~~p~~~--~~~----~~~~~~~~Ga~v~~~ 121 (273)
..+.|. ++-+++.-..|.+ .+.|.-|..+|++++++..-.. ++. -++.|+..|++|...
T Consensus 100 L~~~gi----~~lvi~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~as~~~~~h~~al~~m~~~g~~v~~t 165 (208)
T 1yac_A 100 VKATGK----KQLIIAGVVTEVCVAFPALSAIEEGFDVFVVTDASGTFNEITRHSAWDRMSQAGAQLMTW 165 (208)
T ss_dssp HHHTTC----SEEEEEEBSCCCCCHHHHHHHHHTTCEEEEETTSCBCSSHHHHHHHHHHHHHHTCEEECH
T ss_pred HHhcCC----CEEEEEEeccchhHHHHHHHHHHCCCEEEEECcccCCCCHHHHHHHHHHHHHcCCEEeeH
Confidence 344565 4545555556666 6777778889999888766432 222 266777789988754
No 446
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=33.19 E-value=1.8e+02 Score=23.02 Aligned_cols=52 Identities=23% Similarity=0.141 Sum_probs=36.6
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHH-HHcCCEEEEeCC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIIL-RALGAEVYLADP 123 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~-~~~Ga~v~~~~~ 123 (273)
...+|+..+|--|.++|......|.+++++... ..+.+.+ +..|+..+.++-
T Consensus 6 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~D~ 58 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFAKEGARLVACDIE---EGPLREAAEAVGAHPVVMDV 58 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHTTTCEEEECCT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHcCCEEEEecC
Confidence 455888888989999999988899998877543 3343333 334766666654
No 447
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=33.10 E-value=97 Score=26.36 Aligned_cols=53 Identities=11% Similarity=-0.064 Sum_probs=33.3
Q ss_pred EEEeeCCChHHHHHHHH-HHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 024040 71 VLIELTSGNTGIGLAFI-AASRGYKLIIIMPSTYSIERRIILRALGAEVYLADP 123 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~-a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~ 123 (273)
.|+..++|..+..++.- .+.++-.-.|+++...-..-...++..|++++.++-
T Consensus 97 ~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~ 150 (397)
T 3fsl_A 97 ATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPW 150 (397)
T ss_dssp EEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEECC
T ss_pred EEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEEee
Confidence 37778888888877742 222222223444444445567778889999999875
No 448
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=33.10 E-value=1.2e+02 Score=24.69 Aligned_cols=43 Identities=19% Similarity=-0.054 Sum_probs=32.6
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCE
Q 024040 72 LIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAE 117 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~ 117 (273)
|.....|+.|.++|......|.+++++-+ ++.+.+.++.+|..
T Consensus 3 i~iiG~G~~G~~~a~~l~~~g~~V~~~~~---~~~~~~~~~~~g~~ 45 (279)
T 2f1k_A 3 IGVVGLGLIGASLAGDLRRRGHYLIGVSR---QQSTCEKAVERQLV 45 (279)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECS---CHHHHHHHHHTTSC
T ss_pred EEEEcCcHHHHHHHHHHHHCCCEEEEEEC---CHHHHHHHHhCCCC
Confidence 55567899999999999999998776633 45666777777763
No 449
>2wt9_A Nicotinamidase; hydrolase, pyrazinamidase; HET: GOL; 1.65A {Acinetobacter baumannii} PDB: 2wta_A*
Probab=33.09 E-value=1.9e+02 Score=23.18 Aligned_cols=58 Identities=16% Similarity=0.198 Sum_probs=39.5
Q ss_pred HHcCCCCCCCeEEEeeCCChHH-HHHHHHHHHcCCeEEEEecC--CCC-----HHHHHHHHHcCCEEEEe
Q 024040 60 EDKGLITPGKTVLIELTSGNTG-IGLAFIAASRGYKLIIIMPS--TYS-----IERRIILRALGAEVYLA 121 (273)
Q Consensus 60 ~~~g~~~~g~~~vv~~ssGN~g-~a~A~~a~~~g~~~~i~~p~--~~~-----~~~~~~~~~~Ga~v~~~ 121 (273)
.+.|. ++-+|+.-..|.+ .+.|.-|..+|++++|+..- ..+ ..-++.|+..|++|+..
T Consensus 163 ~~~gi----~~lvv~G~~T~~CV~~Ta~dA~~~Gy~V~Vv~Da~as~~~~~~~~~aL~~m~~~g~~v~tt 228 (235)
T 2wt9_A 163 KERGI----DTVYVVGIATDFCVAWTALDAVKQGFKTLVIEDACKGIDLNGSLEQAWQTMQQQGVVRIQS 228 (235)
T ss_dssp HHTTC----CEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECCCSTTHHHHHHHHHHHTTCEEECH
T ss_pred HHCCC----CEEEEEEeCccHHHHHHHHHHHhCCCEEEEechhccCCChhHHHHHHHHHHHHcCCEEEEH
Confidence 44565 5546666666777 57788899999999988653 112 23367788889998753
No 450
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=32.95 E-value=2e+02 Score=23.42 Aligned_cols=45 Identities=20% Similarity=0.287 Sum_probs=31.4
Q ss_pred hHHHHHHhhCCCcCEEEEecCCCccHHHHHHHHHhhCC--CcEEEEEec
Q 024040 163 TGPEIWNDSGGKVDAFIAGIGTGGTVTGAGRFLKEKNP--NIKVYGIEP 209 (273)
Q Consensus 163 ~~~Ei~~q~~~~~d~iv~p~G~Gg~~~Gi~~~~k~~~~--~~~vigVe~ 209 (273)
...+++++.+++||+||+. +...+.|+..++++.+. ++.|+|.+.
T Consensus 177 ~~~~~l~~~~~~~~ai~~~--~d~~a~g~~~al~~~G~~~di~vig~d~ 223 (313)
T 3m9w_A 177 IMENALTANNNKIDAVVAS--NDATAGGAIQALSAQGLSGKVAISGQDA 223 (313)
T ss_dssp HHHHHHHHTTTCCCEEEES--SHHHHHHHHHHHHTTTCTTTSEECCCSC
T ss_pred HHHHHHHhCCCCeeEEEEC--CCchHHHHHHHHHHcCCCCCcEEEecCC
Confidence 3445555543578999886 45667799999988764 577887764
No 451
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=32.93 E-value=1.6e+02 Score=25.96 Aligned_cols=50 Identities=26% Similarity=0.244 Sum_probs=37.6
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-----CH----HHHHHHHHcCCEEEE
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMPSTY-----SI----ERRIILRALGAEVYL 120 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~-----~~----~~~~~~~~~Ga~v~~ 120 (273)
.++...+|..|.-+|...+++|.+++++.+... ++ .-.+.++..|.+++.
T Consensus 172 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~ 230 (455)
T 1ebd_A 172 SLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVT 230 (455)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred eEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEe
Confidence 488889999999999999999999999976421 22 123456677877764
No 452
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=32.90 E-value=1.4e+02 Score=26.58 Aligned_cols=49 Identities=14% Similarity=0.191 Sum_probs=37.0
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-----CH----HHHHHHHHcCCEEE
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMPSTY-----SI----ERRIILRALGAEVY 119 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~-----~~----~~~~~~~~~Ga~v~ 119 (273)
.++...+|+.|.-+|...+++|.+++++.+... ++ .-.+.++..|.+++
T Consensus 185 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~ 242 (478)
T 1v59_A 185 RLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGASMDGEVAKATQKFLKKQGLDFK 242 (478)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEE
T ss_pred eEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEE
Confidence 388889999999999999999999999975421 12 23445667787765
No 453
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=32.78 E-value=85 Score=28.01 Aligned_cols=52 Identities=21% Similarity=0.185 Sum_probs=37.6
Q ss_pred EEeeCCChHHHHHHHHHHH------cCC-eEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 024040 72 LIELTSGNTGIGLAFIAAS------RGY-KLIIIMPSTYSIERRIILRALGAEVYLADP 123 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~------~g~-~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~ 123 (273)
++..++|..+..+|..+.+ .|+ +-.|+++...-..-...++.+|++++.++.
T Consensus 129 ~~~~~ggt~a~~~a~~a~~~~~~~~~g~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~ 187 (497)
T 3mc6_A 129 GTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAPVTAHAGFDKAAYYFGMKLRHVEL 187 (497)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHHHHSCCSSCEEEEETTSCHHHHHHHHHSCCEEEEECB
T ss_pred EEEcCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCccHHHHHHHHHcCCeEEEEec
Confidence 6777777777777766543 243 126777877777778888899999999874
No 454
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=32.75 E-value=46 Score=28.30 Aligned_cols=30 Identities=23% Similarity=0.414 Sum_probs=26.6
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMP 100 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p 100 (273)
.|+.-.+|-.|.++|+..++.|++++|+=.
T Consensus 4 dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~ 33 (372)
T 2uzz_A 4 DLIIIGSGSVGAAAGYYATRAGLNVLMTDA 33 (372)
T ss_dssp EEEESCTTHHHHHHHHHHHHTTCCEEEECS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEec
Confidence 388889999999999999999999888754
No 455
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=32.62 E-value=45 Score=28.96 Aligned_cols=31 Identities=13% Similarity=0.243 Sum_probs=27.9
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMPS 101 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~ 101 (273)
.|+...+|-.|.++|...++.|++++|+=..
T Consensus 28 dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~ 58 (398)
T 2xdo_A 28 NVAIIGGGPVGLTMAKLLQQNGIDVSVYERD 58 (398)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 4899999999999999999999999998643
No 456
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=32.59 E-value=3.1e+02 Score=30.54 Aligned_cols=59 Identities=20% Similarity=0.260 Sum_probs=41.7
Q ss_pred CCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC--C---HHHHHHHHHcCCEEEEeCCC
Q 024040 66 TPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTY--S---IERRIILRALGAEVYLADPA 124 (273)
Q Consensus 66 ~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~--~---~~~~~~~~~~Ga~v~~~~~~ 124 (273)
.++.+.+|+..+|--|+++|..-...|.+.++++..+. . ...++.++..|++++.+..+
T Consensus 1882 ~~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~D 1945 (2512)
T 2vz8_A 1882 PPHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSN 1945 (2512)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecC
Confidence 34566688888888999999998889998666664322 1 23355566789998877543
No 457
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=32.58 E-value=1.1e+02 Score=25.95 Aligned_cols=51 Identities=10% Similarity=-0.066 Sum_probs=35.6
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 024040 72 LIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADP 123 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~ 123 (273)
|+..++|..+..++..+- .+-.-.|+++...-..-...++..|++++.++-
T Consensus 88 i~~~~g~~~a~~~~~~~l-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~ 138 (391)
T 3dzz_A 88 CVFASGVVPAISAMVRQF-TSPGDQILVQEPVYNMFYSVIEGNGRRVISSDL 138 (391)
T ss_dssp EEEESCHHHHHHHHHHHH-SCTTCEEEECSSCCHHHHHHHHHTTCEEEECCC
T ss_pred EEECCCHHHHHHHHHHHh-CCCCCeEEECCCCcHHHHHHHHHcCCEEEEeee
Confidence 777777788877776654 332234556665556677788889999998874
No 458
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=32.58 E-value=40 Score=29.08 Aligned_cols=29 Identities=17% Similarity=0.299 Sum_probs=26.5
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 024040 72 LIELTSGNTGIGLAFIAASRGYKLIIIMP 100 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~~g~~~~i~~p 100 (273)
|+...+|-.|.++|+..++.|++++|+=.
T Consensus 5 V~IvGaG~aGl~~A~~L~~~G~~v~v~E~ 33 (394)
T 1k0i_A 5 VAIIGAGPSGLLLGQLLHKAGIDNVILER 33 (394)
T ss_dssp EEEECCSHHHHHHHHHHHHHTCCEEEECS
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEeC
Confidence 88889999999999999999999998854
No 459
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=32.43 E-value=1.3e+02 Score=25.50 Aligned_cols=52 Identities=17% Similarity=0.102 Sum_probs=30.0
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHH--HHHHHHHcCCEEEEeCCC
Q 024040 72 LIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIE--RRIILRALGAEVYLADPA 124 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~--~~~~~~~~Ga~v~~~~~~ 124 (273)
++..++|..+..++..+- +.-.-.|+++...-.. -...++..|++++.++.+
T Consensus 67 v~~~~sgt~al~~~~~~~-~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 120 (411)
T 3nnk_A 67 MLVDGTSRAGIEAILVSA-IRPGDKVLVPVFGRFGHLLCEIARRCRAEVHTIEVP 120 (411)
T ss_dssp EEEESCHHHHHHHHHHHH-CCTTCEEEEEECSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred EEECCCcHHHHHHHHHHh-cCCCCEEEEecCCchHHHHHHHHHHcCCeEEEEecC
Confidence 566666777776666554 2222233333322222 466677899999988753
No 460
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=32.42 E-value=1e+02 Score=27.22 Aligned_cols=132 Identities=14% Similarity=0.109 Sum_probs=71.5
Q ss_pred CCCCchhhHHHHHHHHH----HHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCE
Q 024040 42 QPCSSVKDRIAYSMIKD----AEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAE 117 (273)
Q Consensus 42 ~ptGS~K~R~a~~~~~~----a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~ 117 (273)
|-.|.+..-.|.+.+.. +++.|....|.+ |....-||-|.++|..++.+|++++++=|. +.. . ..+.
T Consensus 89 n~pg~~~~~VAE~~l~~lL~l~r~~g~~l~gkt-vGIIGlG~IG~~vA~~l~a~G~~V~~~d~~-----~~~-~-~~~~- 159 (381)
T 3oet_A 89 AAPGCNAIAVVEYVFSALLMLAERDGFSLRDRT-IGIVGVGNVGSRLQTRLEALGIRTLLCDPP-----RAA-R-GDEG- 159 (381)
T ss_dssp CCTTTTHHHHHHHHHHHHHHHHHHTTCCGGGCE-EEEECCSHHHHHHHHHHHHTTCEEEEECHH-----HHH-T-TCCS-
T ss_pred ECCCcCcchhHHHHHHHHHHHHHhcCCccCCCE-EEEEeECHHHHHHHHHHHHCCCEEEEECCC-----hHH-h-ccCc-
Confidence 33455555555555533 344454334444 888899999999999999999998887431 111 0 0111
Q ss_pred EEEeCCCCChhHHHHHHHHHHHhCCCeEeeCCCCCCcchHhhhhchHHHHHHhhCCCcCEEEEecCCCccHH--HHHHHH
Q 024040 118 VYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGTGGTVT--GAGRFL 195 (273)
Q Consensus 118 v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~~~d~iv~p~G~Gg~~~--Gi~~~~ 195 (273)
.+.+ ..++.++. +...++--.++.....-+..+..+.++++ +++.+++-++.|+.+- .+..++
T Consensus 160 --------~~~s----l~ell~~a-DiV~l~~Plt~~g~~~T~~li~~~~l~~m--k~gailIN~aRG~vvde~aL~~aL 224 (381)
T 3oet_A 160 --------DFRT----LDELVQEA-DVLTFHTPLYKDGPYKTLHLADETLIRRL--KPGAILINACRGPVVDNAALLARL 224 (381)
T ss_dssp --------CBCC----HHHHHHHC-SEEEECCCCCCSSTTCCTTSBCHHHHHHS--CTTEEEEECSCGGGBCHHHHHHHH
T ss_pred --------ccCC----HHHHHhhC-CEEEEcCcCCccccccchhhcCHHHHhcC--CCCcEEEECCCCcccCHHHHHHHH
Confidence 1111 12333343 44444332222200001123445777777 5788999999888764 344444
Q ss_pred Hh
Q 024040 196 KE 197 (273)
Q Consensus 196 k~ 197 (273)
+.
T Consensus 225 ~~ 226 (381)
T 3oet_A 225 NA 226 (381)
T ss_dssp HT
T ss_pred Hh
Confidence 43
No 461
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=32.37 E-value=1.4e+02 Score=25.62 Aligned_cols=52 Identities=15% Similarity=0.052 Sum_probs=32.8
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC
Q 024040 72 LIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLADPA 124 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~ 124 (273)
|+..++|..+..++..+- .+-.-.|+++...-..-...++..|++++.++.+
T Consensus 102 v~~t~g~~~a~~~~~~~~-~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 153 (412)
T 2x5d_A 102 AIVTIGSKEGLAHLMLAT-LDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLV 153 (412)
T ss_dssp EEEESCHHHHHHHHHHHH-CCTTCEEEEEESCCHHHHHHHHHHTCEEEEEECS
T ss_pred EEEcCChHHHHHHHHHHh-CCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecC
Confidence 777788878877776553 2221234444434455566677899999988643
No 462
>3o94_A Nicotinamidase; hydrolase; 1.60A {Streptococcus pneumoniae} PDB: 3o90_A 3o91_A* 3o92_A* 3o93_A* 3s2s_A
Probab=32.35 E-value=1.7e+02 Score=23.14 Aligned_cols=54 Identities=20% Similarity=0.205 Sum_probs=32.3
Q ss_pred CeEEEeeCCChHH-HHHHHHHHHcCCeEEEEecC--CCCH----HHHHHHHH-cCCEEEEeC
Q 024040 69 KTVLIELTSGNTG-IGLAFIAASRGYKLIIIMPS--TYSI----ERRIILRA-LGAEVYLAD 122 (273)
Q Consensus 69 ~~~vv~~ssGN~g-~a~A~~a~~~g~~~~i~~p~--~~~~----~~~~~~~~-~Ga~v~~~~ 122 (273)
++-+++.-..+.+ .+.|.-|..+|++++++... ..++ .-++.|+. +|+.|...+
T Consensus 144 ~~lvi~G~~T~~CV~~Ta~~a~~~Gy~v~vv~Da~~~~~~~~h~~aL~~m~~~~G~~i~ts~ 205 (211)
T 3o94_A 144 STVILTGVLTDISVLHTAIDAYNLGYDIEIVKPAVASIWPENHQFALGHFKNTLGAKLVDEN 205 (211)
T ss_dssp CEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECSCHHHHHHHHHHHHHTSCCEEECTT
T ss_pred CeEEEEeeccChHHHHHHHHHHHCCCEEEEechhhcCCCHHHHHHHHHHHHHHCCcEEechh
Confidence 4445555555666 45666677788888777653 2222 23566776 788776543
No 463
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=32.26 E-value=62 Score=28.27 Aligned_cols=49 Identities=14% Similarity=0.156 Sum_probs=37.2
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecCCC------CH----HHHHHHHHcCCEEEE
Q 024040 72 LIELTSGNTGIGLAFIAASRGYKLIIIMPSTY------SI----ERRIILRALGAEVYL 120 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~------~~----~~~~~~~~~Ga~v~~ 120 (273)
++...+|+.|.-+|...+.+|.+++++.+... ++ .-.+.++..|.+++.
T Consensus 155 vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~ 213 (415)
T 3lxd_A 155 AVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARVAGEALSEFYQAEHRAHGVDLRT 213 (415)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhhcCHHHHHHHHHHHHhCCCEEEE
Confidence 88889999999999999999999999876431 22 224456677887764
No 464
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=32.07 E-value=1.1e+02 Score=25.74 Aligned_cols=44 Identities=18% Similarity=0.226 Sum_probs=36.2
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 024040 72 LIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVY 119 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~ 119 (273)
|....+|+.|.++|...++.|.+++++ . .+.+.+.++..|.++.
T Consensus 22 I~IiGaGa~G~~~a~~L~~~G~~V~l~-~---~~~~~~~i~~~g~~~~ 65 (318)
T 3hwr_A 22 VAIMGAGAVGCYYGGMLARAGHEVILI-A---RPQHVQAIEATGLRLE 65 (318)
T ss_dssp EEEESCSHHHHHHHHHHHHTTCEEEEE-C---CHHHHHHHHHHCEEEE
T ss_pred EEEECcCHHHHHHHHHHHHCCCeEEEE-E---cHhHHHHHHhCCeEEE
Confidence 777899999999999999999998888 4 3567788887776654
No 465
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=32.04 E-value=1.5e+02 Score=23.62 Aligned_cols=55 Identities=22% Similarity=0.119 Sum_probs=32.5
Q ss_pred CeEEEeeCCChHHHHHHHHHHH---cCCeEEEEecCCCC-HHHHHHHHHc--CCEEEEeCC
Q 024040 69 KTVLIELTSGNTGIGLAFIAAS---RGYKLIIIMPSTYS-IERRIILRAL--GAEVYLADP 123 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~---~g~~~~i~~p~~~~-~~~~~~~~~~--Ga~v~~~~~ 123 (273)
...+||..+|--|.++|..-.+ .|.+++++-..... ....+.++.. |.++..+..
T Consensus 7 k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~ 67 (259)
T 1oaa_A 7 AVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAA 67 (259)
T ss_dssp EEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEEC
T ss_pred cEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEec
Confidence 3447777777788888888776 79887776543110 1112233332 777766543
No 466
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=32.04 E-value=1.2e+02 Score=26.31 Aligned_cols=47 Identities=26% Similarity=0.330 Sum_probs=33.9
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHH-cCCEEE
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRA-LGAEVY 119 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~-~Ga~v~ 119 (273)
.+ |+....|..|.++|..++.+|.+++++-+ .+.+++.++. +|+.+.
T Consensus 167 ~~-V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~---~~~~~~~~~~~~g~~~~ 214 (369)
T 2eez_A 167 AS-VVILGGGTVGTNAAKIALGMGAQVTILDV---NHKRLQYLDDVFGGRVI 214 (369)
T ss_dssp CE-EEEECCSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHTTTSEE
T ss_pred CE-EEEECCCHHHHHHHHHHHhCCCEEEEEEC---CHHHHHHHHHhcCceEE
Confidence 44 66666699999999999999998766643 3456665554 787753
No 467
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=32.02 E-value=53 Score=27.94 Aligned_cols=30 Identities=33% Similarity=0.545 Sum_probs=26.8
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMP 100 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p 100 (273)
.|+.-.+|-.|.++|+..++.|.+++++=.
T Consensus 8 dVvVIG~Gi~Gls~A~~La~~G~~V~vle~ 37 (363)
T 1c0p_A 8 RVVVLGSGVIGLSSALILARKGYSVHILAR 37 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEECCCHHHHHHHHHHHhCCCEEEEEec
Confidence 488899999999999999999999888853
No 468
>1im5_A 180AA long hypothetical pyrazinamidase/nicotinamidase; pyrazinamide, tuberculosis, PZA resistance, drug resistance, metal ION catalysis; 1.65A {Pyrococcus horikoshii} SCOP: c.33.1.3 PDB: 1ilw_A
Probab=31.99 E-value=1.7e+02 Score=22.24 Aligned_cols=57 Identities=14% Similarity=0.162 Sum_probs=37.9
Q ss_pred HHHcCCCCCCCeEEEeeCCChHH-HHHHHHHHHcCCeEEEEecC--CCCH----HHHHHHHHcCCEEE
Q 024040 59 AEDKGLITPGKTVLIELTSGNTG-IGLAFIAASRGYKLIIIMPS--TYSI----ERRIILRALGAEVY 119 (273)
Q Consensus 59 a~~~g~~~~g~~~vv~~ssGN~g-~a~A~~a~~~g~~~~i~~p~--~~~~----~~~~~~~~~Ga~v~ 119 (273)
+.+.|. .+-+++.-..|.+ .+.|.-+..+|++++++..- ..++ .-++.|+..|++|+
T Consensus 115 L~~~gi----~~lvi~G~~t~~CV~~Ta~da~~~Gy~v~vv~Da~~~~~~~~h~~al~~m~~~g~~v~ 178 (180)
T 1im5_A 115 LRGNGV----KRVYICGVATEYCVRATALDALKHGFEVYLLRDAVKGIKPEDEERALEEMKSRGIKIV 178 (180)
T ss_dssp HHHTTC----CEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECSCHHHHHHHHHHHHHTTCEEE
T ss_pred HHhCCC----CEEEEEEeecCHHHHHHHHHHHHCCCEEEEehhhccCCCHHHHHHHHHHHHHcCCEEE
Confidence 344564 4545566566666 56777788999999988763 2232 23677788898875
No 469
>3a11_A Translation initiation factor EIF-2B, delta subun; isomerase, hexamer, rossmann fold; 2.50A {Thermococcus kodakaraensis} PDB: 3a9c_A* 3vm6_A*
Probab=31.97 E-value=1.3e+02 Score=26.04 Aligned_cols=58 Identities=17% Similarity=0.195 Sum_probs=40.8
Q ss_pred CCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH--H--HHHHHHHcCCEEEEeCC
Q 024040 65 ITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSI--E--RRIILRALGAEVYLADP 123 (273)
Q Consensus 65 ~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~--~--~~~~~~~~Ga~v~~~~~ 123 (273)
+..|.. |.|.+.+.+..++-..|...|.+..|++.++-|. . ....+...|-.+..+..
T Consensus 139 I~~g~~-ILTh~~S~tvl~~l~~A~~~gk~~~V~v~EtRP~~qGrltA~eL~~~GI~vtlI~D 200 (338)
T 3a11_A 139 IEDGDV-IMTHCHSKAAISVMKTAWEQGKDIKVIVTETRPKWQGKITAKELASYGIPVIYVVD 200 (338)
T ss_dssp CCTTCE-EEECSCCHHHHHHHHHHHHTTCCCEEEEECCTTTTHHHHHHHHHHHTTCCEEEECG
T ss_pred hCCCCE-EEEeCCcHHHHHHHHHHHHCCCeEEEEEeCCCCchhhHHHHHHHHhCCCCEEEEeh
Confidence 445544 8877666666666667888899999999886553 2 24566778998888764
No 470
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=31.87 E-value=1.8e+02 Score=23.38 Aligned_cols=33 Identities=24% Similarity=0.183 Sum_probs=27.5
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPS 101 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~ 101 (273)
...+|+..+|.-|.++|......|.+++++...
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~ 41 (264)
T 2dtx_A 9 KVVIVTGASMGIGRAIAERFVDEGSKVIDLSIH 41 (264)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecC
Confidence 355888888999999999999999998877654
No 471
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=31.81 E-value=51 Score=28.14 Aligned_cols=30 Identities=20% Similarity=0.423 Sum_probs=26.6
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMP 100 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p 100 (273)
.|+.-.+|-.|.++|+..++.|.+++++=.
T Consensus 5 dvvIIGaG~~Gl~~A~~La~~G~~V~vie~ 34 (389)
T 2gf3_A 5 DVIVVGAGSMGMAAGYQLAKQGVKTLLVDA 34 (389)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CEEEECCCHHHHHHHHHHHhCCCeEEEEeC
Confidence 488889999999999999999999888753
No 472
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=31.73 E-value=1.1e+02 Score=26.19 Aligned_cols=53 Identities=21% Similarity=0.094 Sum_probs=31.2
Q ss_pred EEeeCCChHHHHHHHHHHHc---CCeEEEEecCCCCHHHHHH---HHHcCCEEEEeCCC
Q 024040 72 LIELTSGNTGIGLAFIAASR---GYKLIIIMPSTYSIERRII---LRALGAEVYLADPA 124 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~~---g~~~~i~~p~~~~~~~~~~---~~~~Ga~v~~~~~~ 124 (273)
++..++|..+..+|..+-.. +-.-.|+++...-...... ++..|++++.++.+
T Consensus 88 v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 146 (423)
T 3lvm_A 88 IVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQ 146 (423)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCC
T ss_pred EEEeCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccC
Confidence 77777788887777654431 1123344554444443333 36679999998754
No 473
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=31.67 E-value=1.7e+02 Score=23.60 Aligned_cols=52 Identities=19% Similarity=0.073 Sum_probs=34.3
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAEVYLAD 122 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~ 122 (273)
...+||..+|--|.++|......|.+++++...... ..+..+.++.++..+.
T Consensus 6 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~ 57 (281)
T 3m1a_A 6 KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEA--LDDLVAAYPDRAEAIS 57 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGG--GHHHHHHCTTTEEEEE
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH--HHHHHHhccCCceEEE
Confidence 345778888889999999988899988877654321 1223344565555443
No 474
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=31.66 E-value=55 Score=26.54 Aligned_cols=30 Identities=10% Similarity=0.202 Sum_probs=27.0
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMP 100 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p 100 (273)
.|+.-.+|-.|+++|...++.|++++++=+
T Consensus 4 ~vvIIG~G~aGl~aA~~l~~~g~~v~lie~ 33 (297)
T 3fbs_A 4 DVIIIGGSYAGLSAALQLGRARKNILLVDA 33 (297)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEeC
Confidence 488889999999999999999999999863
No 475
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=31.53 E-value=84 Score=25.91 Aligned_cols=43 Identities=30% Similarity=0.219 Sum_probs=31.3
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCE
Q 024040 72 LIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGAE 117 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~ 117 (273)
|.....|+.|.++|......|.+++++-+. +.+.+.+...|++
T Consensus 4 i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~---~~~~~~~~~~g~~ 46 (287)
T 3pef_A 4 FGFIGLGIMGSAMAKNLVKAGCSVTIWNRS---PEKAEELAALGAE 46 (287)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECSS---GGGGHHHHHTTCE
T ss_pred EEEEeecHHHHHHHHHHHHCCCeEEEEcCC---HHHHHHHHHCCCe
Confidence 666688999999999999999998877443 3444445445543
No 476
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=31.45 E-value=1.3e+02 Score=23.52 Aligned_cols=74 Identities=16% Similarity=0.223 Sum_probs=41.9
Q ss_pred HHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHh-CCCeEeeCCCCCCcchHhhhhchHHHHHHhhCCCcCEEEEecCC
Q 024040 106 ERRIILRALGAEVYLADPAVGFEGFVKKGEEILNR-TPNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGT 184 (273)
Q Consensus 106 ~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~-~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~~~d~iv~p~G~ 184 (273)
.-.+.+...|++|+.+..+ .+...+...++.++ .....++ +. |.... .....+..++.+++ +.+|.+|..+|.
T Consensus 17 ~ia~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~-~~-D~~~~-~~v~~~~~~~~~~~-g~id~li~~Ag~ 90 (235)
T 3l77_A 17 AIARALARDGYALALGARS--VDRLEKIAHELMQEQGVEVFYH-HL-DVSKA-ESVEEFSKKVLERF-GDVDVVVANAGL 90 (235)
T ss_dssp HHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHHCCCEEEE-EC-CTTCH-HHHHHHCC-HHHHH-SSCSEEEECCCC
T ss_pred HHHHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhhcCCeEEEE-Ee-ccCCH-HHHHHHHHHHHHhc-CCCCEEEECCcc
Confidence 4566777789999988753 33333444444322 2233332 22 22223 24445556677777 579999999886
Q ss_pred C
Q 024040 185 G 185 (273)
Q Consensus 185 G 185 (273)
+
T Consensus 91 ~ 91 (235)
T 3l77_A 91 G 91 (235)
T ss_dssp C
T ss_pred c
Confidence 4
No 477
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=31.43 E-value=1e+02 Score=27.04 Aligned_cols=22 Identities=23% Similarity=0.357 Sum_probs=13.4
Q ss_pred EEeeCCChHHHHHHHHHHHcCC
Q 024040 72 LIELTSGNTGIGLAFIAASRGY 93 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~~g~ 93 (273)
|.....|+.|.+++..++.+|.
T Consensus 170 VlIiGaG~iG~~~a~~l~~~G~ 191 (404)
T 1gpj_A 170 VLVVGAGEMGKTVAKSLVDRGV 191 (404)
T ss_dssp EEEESCCHHHHHHHHHHHHHCC
T ss_pred EEEEChHHHHHHHHHHHHHCCC
Confidence 4445556666666666666665
No 478
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=31.42 E-value=1.1e+02 Score=26.01 Aligned_cols=51 Identities=18% Similarity=0.206 Sum_probs=30.0
Q ss_pred EEeeCCChHHHHHHHHHHH-cCCeEEEEecCCCCHHH-HHHHHHcCCEEEEeCC
Q 024040 72 LIELTSGNTGIGLAFIAAS-RGYKLIIIMPSTYSIER-RIILRALGAEVYLADP 123 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~-~g~~~~i~~p~~~~~~~-~~~~~~~Ga~v~~~~~ 123 (273)
++..++|..+..++..+-. -|-++++.-|.. .... ....+..|++++.++.
T Consensus 72 v~~~~g~t~al~~~~~~~~~~gd~vl~~~~~~-~~~~~~~~~~~~g~~~~~v~~ 124 (396)
T 2ch1_A 72 MCVSGSAHAGMEAMLSNLLEEGDRVLIAVNGI-WAERAVEMSERYGADVRTIEG 124 (396)
T ss_dssp EEESSCHHHHHHHHHHHHCCTTCEEEEEESSH-HHHHHHHHHHHTTCEEEEEEC
T ss_pred EEECCcHHHHHHHHHHHhcCCCCeEEEEcCCc-ccHHHHHHHHHcCCceEEecC
Confidence 7777777777776665542 233333333332 2222 3467889999998874
No 479
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=31.41 E-value=2e+02 Score=22.95 Aligned_cols=88 Identities=19% Similarity=0.190 Sum_probs=50.2
Q ss_pred eEEEEecCC--C--CHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhCCCeEeeCCCCCCcchHhhhhchHHHHHH
Q 024040 94 KLIIIMPST--Y--SIERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRTPNGYILGQFENPANPEIHYETTGPEIWN 169 (273)
Q Consensus 94 ~~~i~~p~~--~--~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~ 169 (273)
+.+++.-.. . -..-.+.+...|++|+.+..+.. ....+...++.++.+......+. |.... .....+..++.+
T Consensus 21 k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~-Dl~~~-~~v~~~~~~~~~ 97 (267)
T 3gdg_A 21 KVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRA-QGAEENVKELEKTYGIKAKAYKC-QVDSY-ESCEKLVKDVVA 97 (267)
T ss_dssp CEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSS-SHHHHHHHHHHHHHCCCEECCBC-CTTCH-HHHHHHHHHHHH
T ss_pred CEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcc-hhHHHHHHHHHHhcCCceeEEec-CCCCH-HHHHHHHHHHHH
Confidence 455555433 2 23456677778999998865321 22234445554432222333233 22333 345666778888
Q ss_pred hhCCCcCEEEEecCCC
Q 024040 170 DSGGKVDAFIAGIGTG 185 (273)
Q Consensus 170 q~~~~~d~iv~p~G~G 185 (273)
++ +.+|.+|..+|..
T Consensus 98 ~~-g~id~li~nAg~~ 112 (267)
T 3gdg_A 98 DF-GQIDAFIANAGAT 112 (267)
T ss_dssp HT-SCCSEEEECCCCC
T ss_pred Hc-CCCCEEEECCCcC
Confidence 77 5799999998854
No 480
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5
Probab=31.29 E-value=1.2e+02 Score=25.33 Aligned_cols=39 Identities=21% Similarity=0.296 Sum_probs=28.5
Q ss_pred CCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC
Q 024040 65 ITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYS 104 (273)
Q Consensus 65 ~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~ 104 (273)
+.+|. .|.|.+.|.+..++...+...|.++.|++.++-|
T Consensus 107 I~~g~-~IlT~~~s~Tv~~~l~~a~~~~~~~~V~v~etrP 145 (276)
T 1vb5_A 107 IDDGD-VIITHSFSSTVLEIIRTAKERKKRFKVILTESSP 145 (276)
T ss_dssp CCTTE-EEECCSCCHHHHHHHHHHHHTTCCEEEEEECCTT
T ss_pred ccCCC-EEEEeCCChHHHHHHHHHHHcCCeEEEEEeCCCc
Confidence 33444 4887887778888888888778888888876543
No 481
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=31.27 E-value=2e+02 Score=23.14 Aligned_cols=32 Identities=9% Similarity=0.101 Sum_probs=25.0
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMP 100 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p 100 (273)
...+||..+|--|.++|..-.+.|.+++++-.
T Consensus 9 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r 40 (265)
T 3lf2_A 9 AVAVVTGGSSGIGLATVELLLEAGAAVAFCAR 40 (265)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 45578888888899999888888988766644
No 482
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=31.24 E-value=2.2e+02 Score=23.47 Aligned_cols=69 Identities=16% Similarity=0.229 Sum_probs=40.6
Q ss_pred CC-ceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 024040 30 CV-ARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPS 101 (273)
Q Consensus 30 ~g-~~l~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~ 101 (273)
.| +|-..+.++-.-.|-+-|-... +....+.|.-..+.+ ++.-.+|-.++|++++....|.+-+.++..
T Consensus 88 iGAVNTi~~~~dG~l~G~NTD~~Gf--~~~L~~~g~~~~~~~-~lilGaGGaarai~~aL~~~g~~~i~i~nR 157 (269)
T 3tum_A 88 LGSINVIRRERDGRLLGDNVDGAGF--LGAAHKHGFEPAGKR-ALVIGCGGVGSAIAYALAEAGIASITLCDP 157 (269)
T ss_dssp HTCCSEEEECTTSCEEEECCHHHHH--HHHHHHTTCCCTTCE-EEEECCSHHHHHHHHHHHHTTCSEEEEECS
T ss_pred cCceeEEEECCCCEEEEEEcChHHH--HHHHHHhCCCcccCe-EEEEecHHHHHHHHHHHHHhCCCeEEEeCC
Confidence 45 5655554443345655554222 222233443223344 777788889999999999999866555543
No 483
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=31.19 E-value=86 Score=26.20 Aligned_cols=65 Identities=11% Similarity=0.073 Sum_probs=36.5
Q ss_pred CC-ceEEEEeCCCCCCCchhhH-HHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCC-eEEEE
Q 024040 30 CV-ARIAAKLEMMQPCSSVKDR-IAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGY-KLIII 98 (273)
Q Consensus 30 ~g-~~l~~K~E~~~ptGS~K~R-~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~-~~~i~ 98 (273)
.| +|..++.++-.-.|-+-|- |....+ .+.+.-..+.+ ++...+|..|++++.+....|. +++|+
T Consensus 89 iGAVNTv~~~~~g~l~G~NTD~~G~~~~L---~~~~~~l~~k~-vlvlGaGg~g~aia~~L~~~G~~~v~v~ 156 (281)
T 3o8q_A 89 AGAVNTLKKLDDGEILGDNTDGEGLVQDL---LAQQVLLKGAT-ILLIGAGGAARGVLKPLLDQQPASITVT 156 (281)
T ss_dssp HTCCSEEEECTTSCEEEECCHHHHHHHHH---HHTTCCCTTCE-EEEECCSHHHHHHHHHHHTTCCSEEEEE
T ss_pred hCeeeEEEEcCCCcEEEEecHHHHHHHHH---HHhCCCccCCE-EEEECchHHHHHHHHHHHhcCCCeEEEE
Confidence 45 4655554544445666653 222333 23343223344 5555668899999988888886 45444
No 484
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=31.12 E-value=2e+02 Score=23.01 Aligned_cols=74 Identities=12% Similarity=0.059 Sum_probs=43.4
Q ss_pred HHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHHhC-CCeEeeCCCCCCcchHhhhhchHHHHHHhhCCCcCEEEEecCC
Q 024040 106 ERRIILRALGAEVYLADPAVGFEGFVKKGEEILNRT-PNGYILGQFENPANPEIHYETTGPEIWNDSGGKVDAFIAGIGT 184 (273)
Q Consensus 106 ~~~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~~~d~iv~p~G~ 184 (273)
.-.+.+...|++|+.++.+ .+...+...++.+.. ....++ +. |-... .....+..++.+++ +.+|.+|..+|.
T Consensus 25 aia~~l~~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~~-~~-Dv~~~-~~v~~~~~~~~~~~-g~id~lvnnAg~ 98 (262)
T 3pk0_A 25 GIATVFARAGANVAVAGRS--TADIDACVADLDQLGSGKVIGV-QT-DVSDR-AQCDALAGRAVEEF-GGIDVVCANAGV 98 (262)
T ss_dssp HHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHTTSSSCEEEE-EC-CTTSH-HHHHHHHHHHHHHH-SCCSEEEECCCC
T ss_pred HHHHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhhCCCcEEEE-Ec-CCCCH-HHHHHHHHHHHHHh-CCCCEEEECCCC
Confidence 4466677789999998753 233334444443332 122322 22 22223 24455667777777 579999999885
Q ss_pred C
Q 024040 185 G 185 (273)
Q Consensus 185 G 185 (273)
.
T Consensus 99 ~ 99 (262)
T 3pk0_A 99 F 99 (262)
T ss_dssp C
T ss_pred C
Confidence 4
No 485
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=31.08 E-value=52 Score=28.56 Aligned_cols=29 Identities=14% Similarity=0.130 Sum_probs=25.9
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 024040 72 LIELTSGNTGIGLAFIAASRGYKLIIIMP 100 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~~g~~~~i~~p 100 (273)
|+.-.+|-.|.+.|+..++.|.+++|+=.
T Consensus 3 VvVIGaGiaGLsaA~~La~~G~~V~vlE~ 31 (425)
T 3ka7_A 3 TVVIGAGLGGLLSAARLSKAGHEVEVFER 31 (425)
T ss_dssp EEEECCBHHHHHHHHHHHHTTCEEEEECS
T ss_pred EEEECCCHHHHHHHHHHHhCCCceEEEeC
Confidence 78889999999999999999999888843
No 486
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=31.06 E-value=51 Score=29.95 Aligned_cols=29 Identities=17% Similarity=0.302 Sum_probs=26.2
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIM 99 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~ 99 (273)
.||...+|..|++.|+.+++.|.+++|+=
T Consensus 43 DVvVVGaG~AGl~AA~~aa~~G~~V~vlE 71 (510)
T 4at0_A 43 DVVVAGYGIAGVAASIEAARAGADVLVLE 71 (510)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCcEEEEe
Confidence 48889999999999999999999988774
No 487
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=31.04 E-value=2.7e+02 Score=24.28 Aligned_cols=30 Identities=23% Similarity=0.326 Sum_probs=21.7
Q ss_pred EEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 024040 72 LIELTSGNTGIGLAFIAASRGYKLIIIMPS 101 (273)
Q Consensus 72 vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~ 101 (273)
|+...+|..|+.++.+++++|++++++-+.
T Consensus 22 ili~g~g~~g~~~~~a~~~~G~~v~~v~~~ 51 (433)
T 2dwc_A 22 ILLLGSGELGKEIAIEAQRLGVEVVAVDRY 51 (433)
T ss_dssp EEEESCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 555666777888888888888887776543
No 488
>1wpn_A Manganese-dependent inorganic pyrophosphatase; metal binding, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.107.1.1
Probab=30.91 E-value=94 Score=23.88 Aligned_cols=37 Identities=14% Similarity=0.099 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCC
Q 024040 80 TGIGLAFIAASRGYKLIIIMPSTYSIERRIILRALGA 116 (273)
Q Consensus 80 ~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga 116 (273)
.+.+++...+++|.++.+++|...++.....+..+|-
T Consensus 19 Sa~al~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~~~ 55 (188)
T 1wpn_A 19 SAIAYADLKNKLGFNAEPVRLGQVNGETQYALDYFKQ 55 (188)
T ss_dssp HHHHHHHHHHHTTCCEEEEESSCCCHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHcCC
Confidence 3456677788899999999998777665555566653
No 489
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=30.79 E-value=2.1e+02 Score=22.98 Aligned_cols=15 Identities=27% Similarity=0.131 Sum_probs=10.8
Q ss_pred CHHHHHHHHHHHHHH
Q 024040 249 SSEEAIETSKLLALK 263 (273)
Q Consensus 249 ~d~e~~~a~~~l~~~ 263 (273)
+-+|+.+++..|+..
T Consensus 231 ~pedvA~~v~fL~s~ 245 (265)
T 3lf2_A 231 KPIEAARAILFLASP 245 (265)
T ss_dssp CHHHHHHHHHHHHSG
T ss_pred CHHHHHHHHHHHhCc
Confidence 457788888877764
No 490
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=30.78 E-value=1e+02 Score=26.93 Aligned_cols=51 Identities=24% Similarity=0.333 Sum_probs=36.1
Q ss_pred EEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHH----HHHcCCEEEEeC
Q 024040 72 LIELTS--GNTGIGLAFIAASRGYKLIIIMPSTY--SIERRII----LRALGAEVYLAD 122 (273)
Q Consensus 72 vv~~ss--GN~g~a~A~~a~~~g~~~~i~~p~~~--~~~~~~~----~~~~Ga~v~~~~ 122 (273)
|+.... +|.+.++..+++++|++++++.|+.. ++.-+.. .+..|+++..+.
T Consensus 184 ia~vGD~~~~va~S~~~~~~~~g~~v~~~~P~~~~p~~~~~~~~~~~~~~~g~~v~~~~ 242 (358)
T 4h31_A 184 FAYLGDARNNVGNSLMVGAAKMGMDIRLVGPQAYWPDEELVAACQAIAKQTGGKITLTE 242 (358)
T ss_dssp EEEESCTTSHHHHHHHHHHHHHTCEEEEESCGGGSCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred EEecCCCCcccchHHHHHHHhcCceEEEeCCcccCCCHHHHHHHHHHHHHcCCcceecc
Confidence 444433 58999999999999999999999743 3333332 345688888875
No 491
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=30.53 E-value=96 Score=27.76 Aligned_cols=51 Identities=18% Similarity=0.035 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHH-cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 024040 50 RIAYSMIKDAED-KGLITPGKTVLIELTSGNTGIGLAFIAASRGYKLIIIMPS 101 (273)
Q Consensus 50 R~a~~~~~~a~~-~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~ 101 (273)
||+.+.+..+.+ .|.-..|. +|+....||-|..+|.....+|.+++.+...
T Consensus 191 ~Gv~~~~~~~~~~~g~~l~gk-~vaVqG~GnVG~~aa~~L~e~GakVVavsD~ 242 (421)
T 1v9l_A 191 FGVAVATREMAKKLWGGIEGK-TVAIQGMGNVGRWTAYWLEKMGAKVIAVSDI 242 (421)
T ss_dssp HHHHHHHHHHHHHHHSCCTTC-EEEEECCSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred HHHHHHHHHHHHhcCCCcCCC-EEEEECcCHHHHHHHHHHHHCCCEEEEEECC
Confidence 577777766553 44322344 4888888999999999888889888866543
No 492
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=30.50 E-value=47 Score=26.76 Aligned_cols=37 Identities=22% Similarity=0.239 Sum_probs=25.1
Q ss_pred CEEEEecCCCccHHHHHHHHHhhCCCcEEEEEecCCC
Q 024040 176 DAFIAGIGTGGTVTGAGRFLKEKNPNIKVYGIEPSES 212 (273)
Q Consensus 176 d~iv~p~G~Gg~~~Gi~~~~k~~~~~~~vigVe~~~~ 212 (273)
..+=+.+|+|....-++..++...+..+|++|+....
T Consensus 84 ~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~ 120 (236)
T 2bm8_A 84 TIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLS 120 (236)
T ss_dssp EEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCT
T ss_pred EEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChH
Confidence 3455677777776655554444567789999998654
No 493
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=30.34 E-value=58 Score=28.38 Aligned_cols=50 Identities=12% Similarity=0.133 Sum_probs=36.3
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC------CH----HHHHHHHHcCCEEEE
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMPSTY------SI----ERRIILRALGAEVYL 120 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~------~~----~~~~~~~~~Ga~v~~ 120 (273)
.++...+|+.|.-+|...+.+|.+++++.+... ++ .-.+.++..|.+++.
T Consensus 144 ~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~~ 203 (404)
T 3fg2_P 144 HVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARVVTPEISSYFHDRHSGAGIRMHY 203 (404)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHTTCEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhccCHHHHHHHHHHHHhCCcEEEE
Confidence 388889999999999999999999999875421 22 123445666776653
No 494
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=30.34 E-value=2.1e+02 Score=22.79 Aligned_cols=32 Identities=22% Similarity=0.270 Sum_probs=24.8
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMP 100 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p 100 (273)
...+||..+|--|.++|..-.+.|.+++++-.
T Consensus 13 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r 44 (252)
T 3f1l_A 13 RIILVTGASDGIGREAAMTYARYGATVILLGR 44 (252)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 45578888888889988888888988776654
No 495
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=30.26 E-value=2.1e+02 Score=22.97 Aligned_cols=51 Identities=22% Similarity=0.148 Sum_probs=34.1
Q ss_pred CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHH-HHHcCCEEEEeC
Q 024040 69 KTVLIELTSGNTGIGLAFIAASRGYKLIIIMPSTYSIERRII-LRALGAEVYLAD 122 (273)
Q Consensus 69 ~~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~-~~~~Ga~v~~~~ 122 (273)
...+||..+|--|.++|....+.|.+++++... ..+.+. .+.++.++..+.
T Consensus 7 k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~ 58 (263)
T 2a4k_A 7 KTILVTGAASGIGRAALDLFAREGASLVAVDRE---ERLLAEAVAALEAEAIAVV 58 (263)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHTCCSSEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhcCceEEEE
Confidence 455888888889999999988999988777543 333333 233444454443
No 496
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=30.25 E-value=2.4e+02 Score=23.61 Aligned_cols=35 Identities=14% Similarity=0.292 Sum_probs=26.3
Q ss_pred CCcCEEEEecCCCccHHHHHHHHHhhC----CCcEEEEEec
Q 024040 173 GKVDAFIAGIGTGGTVTGAGRFLKEKN----PNIKVYGIEP 209 (273)
Q Consensus 173 ~~~d~iv~p~G~Gg~~~Gi~~~~k~~~----~~~~vigVe~ 209 (273)
+.||+||+. +..++.|+..++++.+ .++.|+|.+-
T Consensus 267 ~~~~ai~~~--nD~~A~g~~~al~~~G~~vP~disvigfD~ 305 (366)
T 3h5t_A 267 PDLTAVLCT--VDALAFGVLEYLKSVGKSAPADLSLTGFDG 305 (366)
T ss_dssp TTCCEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEEEC
T ss_pred CCCcEEEEC--CcHHHHHHHHHHHHcCCCCCCceEEEEECC
Confidence 568999875 4566778889998876 3578888864
No 497
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=30.17 E-value=46 Score=29.42 Aligned_cols=31 Identities=10% Similarity=0.208 Sum_probs=27.9
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMPS 101 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~ 101 (273)
.|+...+|-.|.++|+..++.|++++|+=..
T Consensus 24 ~ViIVGaGpaGl~~A~~La~~G~~V~viE~~ 54 (430)
T 3ihm_A 24 RIGIVGAGTAGLHLGLFLRQHDVDVTVYTDR 54 (430)
T ss_dssp EEEEECCHHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEECCcHHHHHHHHHHHHCCCeEEEEcCC
Confidence 4889999999999999999999999999643
No 498
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=30.12 E-value=55 Score=28.49 Aligned_cols=30 Identities=13% Similarity=0.235 Sum_probs=27.2
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCe-EEEEec
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYK-LIIIMP 100 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~-~~i~~p 100 (273)
.|+...+|-.|.++|...++.|++ ++|+=.
T Consensus 6 dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~ 36 (410)
T 3c96_A 6 DILIAGAGIGGLSCALALHQAGIGKVTLLES 36 (410)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEEES
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCeEEEEEC
Confidence 388899999999999999999999 998864
No 499
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=29.96 E-value=60 Score=26.91 Aligned_cols=30 Identities=23% Similarity=0.412 Sum_probs=27.0
Q ss_pred EEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 024040 71 VLIELTSGNTGIGLAFIAASRGYKLIIIMP 100 (273)
Q Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p 100 (273)
.|+.-.+|-.|.++|..+++.|++++++=+
T Consensus 18 dvvIIG~G~aGl~aA~~l~~~g~~v~lie~ 47 (319)
T 3cty_A 18 DVVIVGAGAAGFSAAVYAARSGFSVAILDK 47 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred cEEEECcCHHHHHHHHHHHhCCCcEEEEeC
Confidence 488899999999999999999999888854
No 500
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=29.92 E-value=2.3e+02 Score=23.94 Aligned_cols=64 Identities=19% Similarity=0.143 Sum_probs=34.4
Q ss_pred CC-ceEEEEeCCCCCCCchhhH-HHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCe-EEEE
Q 024040 30 CV-ARIAAKLEMMQPCSSVKDR-IAYSMIKDAEDKGLITPGKTVLIELTSGNTGIGLAFIAASRGYK-LIII 98 (273)
Q Consensus 30 ~g-~~l~~K~E~~~ptGS~K~R-~a~~~~~~a~~~g~~~~g~~~vv~~ssGN~g~a~A~~a~~~g~~-~~i~ 98 (273)
.| +|-.++. +-.-.|-+-|- |....+ .+.+.-..+.+ ++...+|-.|++++++....|.+ .+|+
T Consensus 112 iGAVNTi~~~-~g~l~G~NTD~~Gf~~~L---~~~~~~l~gk~-~lVlGAGGaaraia~~L~~~G~~~v~v~ 178 (312)
T 3t4e_A 112 VGAINTIVND-DGYLRGYNTDGTGHIRAI---KESGFDMRGKT-MVLLGAGGAATAIGAQAAIEGIKEIKLF 178 (312)
T ss_dssp HTCCSEEEEE-TTEEEEECHHHHHHHHHH---HHTTCCCTTCE-EEEECCSHHHHHHHHHHHHTTCSEEEEE
T ss_pred hCceeEEEec-CCEEEEeCCcHHHHHHHH---HhcCCCcCCCE-EEEECcCHHHHHHHHHHHHcCCCEEEEE
Confidence 45 4543333 22235656653 222222 23343223344 55556677899999998888984 4444
Done!