Query 024042
Match_columns 273
No_of_seqs 435 out of 1445
Neff 11.9
Searched_HMMs 46136
Date Fri Mar 29 08:30:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024042.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024042hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02824 hydrolase, alpha/beta 100.0 1.1E-36 2.4E-41 233.0 23.6 240 23-272 6-294 (294)
2 TIGR02240 PHA_depoly_arom poly 100.0 6.8E-36 1.5E-40 226.4 23.5 237 26-271 3-265 (276)
3 PRK03592 haloalkane dehalogena 100.0 4.1E-35 8.8E-40 224.4 22.8 239 23-272 5-289 (295)
4 PRK00870 haloalkane dehalogena 100.0 1.1E-34 2.4E-39 222.5 23.3 242 21-272 15-301 (302)
5 PLN02679 hydrolase, alpha/beta 100.0 4E-34 8.7E-39 223.4 23.2 240 27-271 63-356 (360)
6 PRK03204 haloalkane dehalogena 100.0 1.1E-33 2.4E-38 214.6 24.3 235 24-269 13-285 (286)
7 PLN02578 hydrolase 100.0 5.3E-33 1.2E-37 216.9 25.4 231 28-270 69-353 (354)
8 TIGR03056 bchO_mg_che_rel puta 100.0 4.1E-33 8.9E-38 212.1 24.0 236 26-270 7-278 (278)
9 KOG4178 Soluble epoxide hydrol 100.0 4E-33 8.6E-38 203.6 19.3 243 21-272 18-320 (322)
10 PLN03087 BODYGUARD 1 domain co 100.0 2.6E-32 5.7E-37 216.0 25.1 241 25-271 176-478 (481)
11 PLN02385 hydrolase; alpha/beta 100.0 1.2E-32 2.5E-37 215.0 22.4 244 26-272 62-345 (349)
12 PLN02965 Probable pheophorbida 100.0 1.4E-32 3.1E-37 205.8 22.0 214 56-271 5-252 (255)
13 PRK10349 carboxylesterase BioH 100.0 9.5E-33 2.1E-37 207.2 20.7 220 38-271 4-255 (256)
14 TIGR03611 RutD pyrimidine util 100.0 7.4E-33 1.6E-37 208.2 19.9 227 38-271 1-257 (257)
15 TIGR03343 biphenyl_bphD 2-hydr 100.0 4.2E-32 9.2E-37 206.8 23.9 227 35-271 19-282 (282)
16 PHA02857 monoglyceride lipase; 100.0 1.1E-31 2.4E-36 203.6 25.3 238 30-272 5-273 (276)
17 TIGR02427 protocat_pcaD 3-oxoa 100.0 2.6E-32 5.7E-37 204.4 21.6 226 38-270 2-251 (251)
18 PRK10673 acyl-CoA esterase; Pr 100.0 7.4E-32 1.6E-36 202.5 23.8 230 37-272 2-255 (255)
19 PLN03084 alpha/beta hydrolase 100.0 1.1E-31 2.4E-36 208.6 25.3 231 32-271 111-383 (383)
20 PRK06489 hypothetical protein; 100.0 9.5E-32 2.1E-36 210.5 23.9 230 34-272 48-357 (360)
21 PRK10749 lysophospholipase L2; 100.0 6.3E-31 1.4E-35 203.5 26.9 238 29-272 34-329 (330)
22 PLN02298 hydrolase, alpha/beta 100.0 2.1E-31 4.5E-36 206.9 24.1 245 25-272 32-317 (330)
23 KOG4409 Predicted hydrolase/ac 100.0 1.2E-30 2.6E-35 191.2 23.0 244 23-272 63-364 (365)
24 PRK11126 2-succinyl-6-hydroxy- 100.0 4.8E-30 1E-34 191.2 22.4 208 54-271 2-241 (242)
25 KOG1454 Predicted hydrolase/ac 100.0 2.9E-30 6.2E-35 196.5 21.1 249 22-272 22-324 (326)
26 TIGR01738 bioH putative pimelo 100.0 3.2E-30 7E-35 192.4 20.8 209 54-269 4-245 (245)
27 PRK14875 acetoin dehydrogenase 100.0 1E-29 2.2E-34 201.1 23.4 233 28-272 112-371 (371)
28 PRK07581 hypothetical protein; 100.0 2.8E-30 6E-35 201.2 18.9 233 34-272 24-336 (339)
29 PLN02211 methyl indole-3-aceta 100.0 1.1E-29 2.4E-34 191.0 21.2 228 33-270 4-268 (273)
30 TIGR01250 pro_imino_pep_2 prol 100.0 4.2E-29 9.1E-34 190.8 24.8 234 29-270 6-288 (288)
31 PF12697 Abhydrolase_6: Alpha/ 100.0 7.1E-31 1.5E-35 193.7 13.7 203 57-264 1-228 (228)
32 PRK08775 homoserine O-acetyltr 100.0 4.3E-30 9.3E-35 200.0 18.6 239 24-272 35-339 (343)
33 TIGR03695 menH_SHCHC 2-succiny 100.0 1.5E-29 3.3E-34 189.3 20.7 214 54-270 1-251 (251)
34 TIGR01392 homoserO_Ac_trn homo 100.0 2.2E-29 4.9E-34 196.6 20.7 233 34-270 14-351 (351)
35 PRK00175 metX homoserine O-ace 100.0 5.2E-29 1.1E-33 195.9 21.9 234 34-272 31-374 (379)
36 PLN02894 hydrolase, alpha/beta 100.0 2E-28 4.3E-33 193.3 24.4 220 51-272 102-385 (402)
37 PLN02652 hydrolase; alpha/beta 100.0 2E-28 4.4E-33 191.6 22.8 242 26-272 111-387 (395)
38 COG2267 PldB Lysophospholipase 100.0 2.7E-28 5.8E-33 184.0 21.8 242 26-272 10-294 (298)
39 TIGR01249 pro_imino_pep_1 prol 100.0 4E-28 8.8E-33 186.3 22.1 234 26-271 5-304 (306)
40 PRK05077 frsA fermentation/res 100.0 1.7E-27 3.7E-32 188.0 23.2 238 25-273 168-413 (414)
41 PLN02511 hydrolase 100.0 4.4E-28 9.5E-33 190.6 19.8 248 23-271 69-364 (388)
42 KOG1455 Lysophospholipase [Lip 100.0 2.3E-27 4.9E-32 170.9 21.1 245 25-272 27-312 (313)
43 PRK13604 luxD acyl transferase 100.0 1.7E-27 3.7E-32 176.3 21.0 222 27-254 11-246 (307)
44 PLN02980 2-oxoglutarate decarb 100.0 1.3E-27 2.7E-32 215.0 23.6 251 13-271 1332-1638(1655)
45 KOG2984 Predicted hydrolase [G 100.0 4.5E-29 9.8E-34 168.3 10.1 243 21-272 17-276 (277)
46 COG1647 Esterase/lipase [Gener 100.0 3.2E-27 6.9E-32 162.0 19.2 213 53-271 14-243 (243)
47 PRK05855 short chain dehydroge 100.0 6.7E-27 1.4E-31 195.5 18.6 233 29-271 7-291 (582)
48 TIGR01607 PST-A Plasmodium sub 99.9 4.7E-25 1E-29 170.2 21.5 235 30-271 2-332 (332)
49 PRK06765 homoserine O-acetyltr 99.9 1.9E-24 4.2E-29 168.7 21.5 235 35-272 40-388 (389)
50 KOG2382 Predicted alpha/beta h 99.9 3.4E-24 7.3E-29 157.2 19.6 220 50-272 48-313 (315)
51 PRK10985 putative hydrolase; P 99.9 7.9E-24 1.7E-28 163.5 22.0 246 23-271 29-319 (324)
52 PRK10566 esterase; Provisional 99.9 2.7E-23 5.9E-28 155.4 23.7 205 52-273 25-249 (249)
53 TIGR03100 hydr1_PEP hydrolase, 99.9 1.5E-23 3.3E-28 158.0 21.7 233 29-271 6-274 (274)
54 PRK11071 esterase YqiA; Provis 99.9 3.6E-23 7.8E-28 146.8 18.1 180 55-270 2-189 (190)
55 KOG4391 Predicted alpha/beta h 99.9 1E-23 2.3E-28 144.2 12.1 221 26-271 55-281 (300)
56 KOG1552 Predicted alpha/beta h 99.9 3.5E-23 7.5E-28 146.5 14.8 213 24-270 34-250 (258)
57 COG1506 DAP2 Dipeptidyl aminop 99.9 1.5E-22 3.2E-27 168.1 20.0 238 23-273 363-617 (620)
58 TIGR01836 PHA_synth_III_C poly 99.9 3.2E-22 6.9E-27 156.3 20.8 240 24-272 35-350 (350)
59 PLN02872 triacylglycerol lipas 99.9 3.7E-22 7.9E-27 155.9 20.9 249 22-272 41-389 (395)
60 KOG2564 Predicted acetyltransf 99.9 3.9E-22 8.4E-27 141.7 14.6 123 26-154 49-180 (343)
61 PF12695 Abhydrolase_5: Alpha/ 99.9 6.5E-22 1.4E-26 135.6 14.8 142 56-252 1-145 (145)
62 PF00561 Abhydrolase_1: alpha/ 99.9 5.7E-23 1.2E-27 151.9 10.2 184 82-266 1-229 (230)
63 PF00326 Peptidase_S9: Prolyl 99.9 8E-21 1.7E-25 138.5 15.2 190 71-273 3-210 (213)
64 PRK11460 putative hydrolase; P 99.9 2E-20 4.3E-25 137.3 16.9 173 51-269 13-209 (232)
65 COG3208 GrsT Predicted thioest 99.9 3.9E-20 8.4E-25 130.3 16.8 214 51-270 4-234 (244)
66 TIGR01838 PHA_synth_I poly(R)- 99.9 1.6E-19 3.4E-24 145.1 20.6 206 52-259 186-462 (532)
67 KOG4667 Predicted esterase [Li 99.9 3.2E-20 7E-25 127.0 13.4 215 51-269 30-255 (269)
68 COG0596 MhpC Predicted hydrola 99.9 3.4E-19 7.4E-24 134.6 20.7 226 34-270 8-280 (282)
69 PLN02442 S-formylglutathione h 99.9 1.3E-19 2.9E-24 137.0 18.2 203 34-254 28-264 (283)
70 TIGR03101 hydr2_PEP hydrolase, 99.9 3.9E-20 8.6E-25 136.7 14.8 127 28-158 3-136 (266)
71 TIGR02821 fghA_ester_D S-formy 99.9 7E-19 1.5E-23 132.8 21.9 216 34-272 23-274 (275)
72 COG0429 Predicted hydrolase of 99.8 2E-19 4.3E-24 132.0 17.1 244 24-271 48-339 (345)
73 PF02230 Abhydrolase_2: Phosph 99.8 7.2E-19 1.6E-23 128.1 16.3 179 50-273 10-216 (216)
74 PF06342 DUF1057: Alpha/beta h 99.8 6.8E-18 1.5E-22 121.5 20.4 214 51-269 32-296 (297)
75 PF06500 DUF1100: Alpha/beta h 99.8 7.8E-19 1.7E-23 134.5 16.6 234 25-272 165-409 (411)
76 PRK10162 acetyl esterase; Prov 99.8 4.9E-18 1.1E-22 130.6 20.9 229 28-272 60-315 (318)
77 PRK07868 acyl-CoA synthetase; 99.8 1.7E-18 3.6E-23 151.8 20.4 216 52-272 65-361 (994)
78 PLN00021 chlorophyllase 99.8 1.4E-18 3E-23 132.0 15.6 175 51-258 49-246 (313)
79 KOG1838 Alpha/beta hydrolase [ 99.8 5.4E-18 1.2E-22 129.0 18.5 248 22-270 90-386 (409)
80 TIGR01840 esterase_phb esteras 99.8 1.1E-17 2.4E-22 121.6 18.0 169 51-237 10-194 (212)
81 PF01738 DLH: Dienelactone hyd 99.8 1.1E-17 2.4E-22 122.3 17.7 178 52-273 12-218 (218)
82 COG0400 Predicted esterase [Ge 99.8 1.7E-17 3.6E-22 117.4 16.1 174 50-272 14-205 (207)
83 PF03096 Ndr: Ndr family; Int 99.8 3.6E-17 7.7E-22 119.3 17.8 236 28-270 2-277 (283)
84 PF05448 AXE1: Acetyl xylan es 99.8 3.9E-17 8.5E-22 124.3 17.3 232 30-272 61-320 (320)
85 COG2945 Predicted hydrolase of 99.8 1.2E-16 2.5E-21 108.0 16.5 173 51-270 25-205 (210)
86 KOG2931 Differentiation-relate 99.8 9.1E-16 2E-20 110.5 21.5 239 25-270 22-304 (326)
87 PRK10115 protease 2; Provision 99.7 2.4E-16 5.1E-21 132.2 18.4 219 26-253 417-654 (686)
88 PF06821 Ser_hydrolase: Serine 99.7 6.5E-17 1.4E-21 112.0 11.8 156 57-257 1-158 (171)
89 PF00975 Thioesterase: Thioest 99.7 1.4E-16 3E-21 117.7 14.3 210 55-269 1-229 (229)
90 COG2021 MET2 Homoserine acetyl 99.7 1E-15 2.2E-20 114.6 17.5 234 34-271 34-367 (368)
91 TIGR03230 lipo_lipase lipoprot 99.7 1.6E-16 3.5E-21 124.4 13.0 108 51-158 38-156 (442)
92 PF05728 UPF0227: Uncharacteri 99.7 7.1E-16 1.5E-20 107.9 14.7 179 57-270 2-187 (187)
93 COG0412 Dienelactone hydrolase 99.7 6.5E-15 1.4E-19 107.7 20.3 197 28-273 5-234 (236)
94 cd00707 Pancreat_lipase_like P 99.7 1.5E-16 3.3E-21 119.4 10.2 124 28-158 17-149 (275)
95 COG3458 Acetyl esterase (deace 99.7 1.1E-15 2.4E-20 108.9 12.9 225 33-270 64-315 (321)
96 KOG1515 Arylacetamide deacetyl 99.7 4.3E-14 9.2E-19 107.3 20.8 235 27-272 63-335 (336)
97 TIGR01849 PHB_depoly_PhaZ poly 99.7 1.2E-13 2.5E-18 107.4 22.3 217 54-272 102-406 (406)
98 KOG2565 Predicted hydrolases o 99.7 6.1E-15 1.3E-19 109.6 14.1 129 26-156 125-264 (469)
99 TIGR00976 /NonD putative hydro 99.7 1.4E-14 3E-19 119.7 17.6 124 31-159 2-135 (550)
100 COG4757 Predicted alpha/beta h 99.6 1.1E-14 2.3E-19 101.4 13.9 233 28-269 8-280 (281)
101 PF02273 Acyl_transf_2: Acyl t 99.6 1.8E-13 3.9E-18 96.3 18.7 223 27-258 4-242 (294)
102 PF07859 Abhydrolase_3: alpha/ 99.6 5.4E-15 1.2E-19 107.8 11.5 189 57-254 1-210 (211)
103 TIGR01839 PHA_synth_II poly(R) 99.6 1.7E-13 3.8E-18 109.6 20.3 197 51-253 212-482 (560)
104 KOG2281 Dipeptidyl aminopeptid 99.6 2.4E-13 5.3E-18 107.9 18.6 228 28-271 616-866 (867)
105 KOG2100 Dipeptidyl aminopeptid 99.6 1.6E-13 3.5E-18 115.8 17.7 231 21-272 494-747 (755)
106 COG3571 Predicted hydrolase of 99.6 5.6E-13 1.2E-17 87.5 15.9 182 51-271 11-210 (213)
107 PF12740 Chlorophyllase2: Chlo 99.6 1.1E-13 2.4E-18 100.4 13.9 176 50-258 13-211 (259)
108 COG3545 Predicted esterase of 99.6 7E-13 1.5E-17 88.9 16.1 174 54-271 2-178 (181)
109 COG0657 Aes Esterase/lipase [L 99.6 4.3E-13 9.2E-18 103.6 17.1 220 38-270 64-308 (312)
110 PF09752 DUF2048: Uncharacteri 99.6 1.9E-13 4.1E-18 102.5 14.0 215 52-270 90-347 (348)
111 TIGR03502 lipase_Pla1_cef extr 99.5 2.6E-13 5.6E-18 113.2 13.5 112 29-141 421-575 (792)
112 PRK10252 entF enterobactin syn 99.5 7.5E-13 1.6E-17 120.7 16.8 200 53-258 1067-1281(1296)
113 PF12146 Hydrolase_4: Putative 99.5 1.3E-13 2.9E-18 82.3 7.7 77 35-116 1-79 (79)
114 PF10230 DUF2305: Uncharacteri 99.5 1.4E-11 3E-16 92.2 19.7 104 54-158 2-124 (266)
115 PF02129 Peptidase_S15: X-Pro 99.5 3.2E-12 6.9E-17 96.7 16.5 125 34-160 1-140 (272)
116 PF10503 Esterase_phd: Esteras 99.5 4.9E-12 1.1E-16 90.8 16.2 179 39-237 2-195 (220)
117 PF08538 DUF1749: Protein of u 99.5 1.9E-12 4.2E-17 95.8 13.8 211 53-270 32-303 (303)
118 PF06028 DUF915: Alpha/beta hy 99.5 9.8E-13 2.1E-17 96.5 11.4 205 51-271 8-254 (255)
119 KOG2624 Triglyceride lipase-ch 99.5 4.1E-12 8.9E-17 98.7 15.1 131 24-159 47-202 (403)
120 PRK05371 x-prolyl-dipeptidyl a 99.4 1.1E-11 2.3E-16 105.3 17.9 193 76-273 273-520 (767)
121 KOG4627 Kynurenine formamidase 99.4 2.5E-12 5.4E-17 88.1 11.0 195 51-269 64-268 (270)
122 KOG3043 Predicted hydrolase re 99.4 1.1E-11 2.4E-16 86.3 13.4 174 54-273 39-241 (242)
123 PF07224 Chlorophyllase: Chlor 99.4 6.8E-12 1.5E-16 89.5 12.5 107 49-159 41-160 (307)
124 PTZ00472 serine carboxypeptida 99.4 6.8E-11 1.5E-15 95.1 19.8 128 28-158 50-218 (462)
125 COG4099 Predicted peptidase [G 99.4 1.3E-11 2.9E-16 89.5 13.6 160 33-237 169-341 (387)
126 PF03959 FSH1: Serine hydrolas 99.4 6.7E-12 1.5E-16 91.0 11.2 161 53-256 3-205 (212)
127 PRK04940 hypothetical protein; 99.4 1.2E-10 2.7E-15 79.9 16.4 170 57-271 2-179 (180)
128 PF08840 BAAT_C: BAAT / Acyl-C 99.4 2.1E-12 4.6E-17 93.4 8.2 142 109-253 7-163 (213)
129 KOG1553 Predicted alpha/beta h 99.4 8.6E-12 1.9E-16 92.3 11.2 187 21-227 210-399 (517)
130 COG3319 Thioesterase domains o 99.4 1.4E-10 3.1E-15 84.9 16.2 100 55-157 1-104 (257)
131 KOG2551 Phospholipase/carboxyh 99.4 1E-10 2.3E-15 81.6 14.5 174 52-270 3-218 (230)
132 PF07819 PGAP1: PGAP1-like pro 99.3 4.3E-11 9.3E-16 87.1 13.0 107 53-160 3-127 (225)
133 KOG3975 Uncharacterized conser 99.3 4.3E-10 9.3E-15 79.7 17.1 219 50-270 25-301 (301)
134 PF12715 Abhydrolase_7: Abhydr 99.3 7.1E-12 1.5E-16 95.2 8.7 119 32-154 95-258 (390)
135 PF03403 PAF-AH_p_II: Platelet 99.3 2.6E-11 5.7E-16 94.9 11.7 156 52-254 98-317 (379)
136 COG3243 PhaC Poly(3-hydroxyalk 99.3 8.9E-11 1.9E-15 89.7 13.9 107 53-160 106-221 (445)
137 KOG2112 Lysophospholipase [Lip 99.3 1E-10 2.2E-15 81.1 12.4 174 54-271 3-203 (206)
138 PF06057 VirJ: Bacterial virul 99.3 8.8E-11 1.9E-15 80.8 11.7 178 55-271 3-191 (192)
139 COG3509 LpqC Poly(3-hydroxybut 99.3 1.4E-09 2.9E-14 79.5 16.7 129 24-156 34-179 (312)
140 smart00824 PKS_TE Thioesterase 99.2 1.4E-09 3E-14 79.2 15.5 197 59-268 2-211 (212)
141 PF10340 DUF2424: Protein of u 99.2 2.5E-09 5.5E-14 82.0 16.7 107 52-159 120-238 (374)
142 PF00450 Peptidase_S10: Serine 99.2 5.2E-09 1.1E-13 84.4 18.0 127 29-158 15-183 (415)
143 PF03583 LIP: Secretory lipase 99.1 8.4E-09 1.8E-13 78.3 16.8 42 213-254 221-266 (290)
144 KOG3847 Phospholipase A2 (plat 99.1 1.2E-09 2.5E-14 80.2 11.4 163 49-258 113-334 (399)
145 PF00151 Lipase: Lipase; Inte 99.1 1.4E-10 3.1E-15 89.0 6.8 109 51-159 68-190 (331)
146 COG1505 Serine proteases of th 99.1 2.4E-09 5.1E-14 85.4 13.0 237 25-273 394-647 (648)
147 COG4814 Uncharacterized protei 99.1 2E-08 4.4E-13 71.6 15.4 200 54-271 45-286 (288)
148 PRK10439 enterobactin/ferric e 99.1 5.3E-08 1.1E-12 77.4 18.7 172 51-253 206-392 (411)
149 PF05677 DUF818: Chlamydia CHL 99.1 4.9E-08 1.1E-12 73.2 16.9 109 26-142 113-236 (365)
150 PF11339 DUF3141: Protein of u 99.0 6.9E-08 1.5E-12 76.2 18.2 105 49-160 63-179 (581)
151 KOG3253 Predicted alpha/beta h 99.0 1.3E-08 2.8E-13 81.2 13.9 159 53-255 175-348 (784)
152 COG4188 Predicted dienelactone 99.0 6.8E-10 1.5E-14 84.0 6.0 204 52-260 69-302 (365)
153 PF01674 Lipase_2: Lipase (cla 99.0 6.7E-10 1.5E-14 79.7 5.4 87 55-142 2-96 (219)
154 PLN02733 phosphatidylcholine-s 99.0 6.8E-09 1.5E-13 82.6 11.4 91 69-159 108-204 (440)
155 COG3150 Predicted esterase [Ge 99.0 4.4E-08 9.5E-13 65.3 12.3 183 57-270 2-187 (191)
156 PF05705 DUF829: Eukaryotic pr 98.9 2E-07 4.3E-12 69.3 15.3 211 56-269 1-240 (240)
157 PF05057 DUF676: Putative seri 98.9 2.9E-08 6.3E-13 72.2 10.0 86 53-140 3-97 (217)
158 PF05990 DUF900: Alpha/beta hy 98.9 3.7E-08 8E-13 72.3 10.2 108 51-158 15-139 (233)
159 KOG2237 Predicted serine prote 98.9 9.6E-08 2.1E-12 77.0 13.0 221 26-253 442-684 (712)
160 KOG1551 Uncharacterized conser 98.8 1.6E-07 3.5E-12 67.5 11.5 212 54-271 113-365 (371)
161 PF12048 DUF3530: Protein of u 98.8 5E-06 1.1E-10 63.8 19.8 203 26-272 63-309 (310)
162 KOG3101 Esterase D [General fu 98.7 4E-07 8.7E-12 63.3 10.7 198 36-253 26-262 (283)
163 PLN03016 sinapoylglucose-malat 98.7 1.6E-05 3.5E-10 63.8 21.4 129 27-158 39-212 (433)
164 KOG4840 Predicted hydrolases o 98.7 8.4E-07 1.8E-11 62.3 11.0 104 53-159 35-147 (299)
165 PF00756 Esterase: Putative es 98.7 1E-07 2.2E-12 71.5 7.3 54 106-159 97-153 (251)
166 PLN02209 serine carboxypeptida 98.7 1.2E-05 2.7E-10 64.5 19.2 127 29-158 43-214 (437)
167 COG1075 LipA Predicted acetylt 98.6 2.2E-07 4.7E-12 72.2 8.9 102 54-158 59-166 (336)
168 COG1770 PtrB Protease II [Amin 98.6 4.7E-06 1E-10 68.0 15.9 225 29-261 423-665 (682)
169 COG4782 Uncharacterized protei 98.6 4.3E-07 9.4E-12 68.7 9.4 107 52-158 114-236 (377)
170 COG2936 Predicted acyl esteras 98.6 3.4E-07 7.3E-12 74.0 9.2 129 27-158 21-161 (563)
171 PLN02606 palmitoyl-protein thi 98.6 1.1E-05 2.5E-10 60.3 16.0 97 54-156 26-132 (306)
172 COG0627 Predicted esterase [Ge 98.5 3.9E-06 8.5E-11 64.1 13.2 108 51-159 51-190 (316)
173 cd00312 Esterase_lipase Estera 98.5 6.4E-07 1.4E-11 74.0 9.4 124 32-158 75-215 (493)
174 KOG1282 Serine carboxypeptidas 98.5 0.00011 2.4E-09 58.8 20.9 128 28-159 47-216 (454)
175 COG1073 Hydrolases of the alph 98.5 1.9E-06 4E-11 66.3 10.9 67 207-273 227-298 (299)
176 PF04301 DUF452: Protein of un 98.5 5.4E-06 1.2E-10 59.1 12.0 81 53-157 10-91 (213)
177 KOG3724 Negative regulator of 98.5 3.2E-06 6.9E-11 70.1 12.1 127 29-159 61-223 (973)
178 PF10142 PhoPQ_related: PhoPQ- 98.4 3.9E-06 8.5E-11 65.1 10.8 149 111-271 159-319 (367)
179 PF05577 Peptidase_S28: Serine 98.4 2.3E-06 4.9E-11 69.5 9.8 105 53-158 28-150 (434)
180 PF08386 Abhydrolase_4: TAP-li 98.4 2.1E-06 4.6E-11 54.4 6.8 59 212-271 35-93 (103)
181 PLN02633 palmitoyl protein thi 98.4 0.00013 2.7E-09 54.9 16.6 100 53-156 24-131 (314)
182 COG2272 PnbA Carboxylesterase 98.3 6.1E-06 1.3E-10 65.3 9.9 121 32-157 76-218 (491)
183 PF11144 DUF2920: Protein of u 98.3 6.6E-05 1.4E-09 58.5 14.8 36 122-157 185-220 (403)
184 PF00135 COesterase: Carboxyle 98.3 7.1E-06 1.5E-10 68.7 9.4 124 32-157 105-246 (535)
185 COG4553 DepA Poly-beta-hydroxy 98.2 0.00041 8.8E-09 51.4 16.6 109 52-161 101-214 (415)
186 COG2939 Carboxypeptidase C (ca 98.2 4.9E-05 1.1E-09 60.5 12.9 104 51-155 98-235 (498)
187 COG2382 Fes Enterochelin ester 98.2 4.8E-05 1E-09 56.6 11.6 108 50-159 94-215 (299)
188 PF05576 Peptidase_S37: PS-10 98.2 1.5E-05 3.4E-10 61.6 9.2 105 51-157 60-170 (448)
189 COG3946 VirJ Type IV secretory 98.0 3E-05 6.6E-10 59.7 7.7 86 53-144 259-349 (456)
190 PF02450 LCAT: Lecithin:choles 98.0 5.6E-05 1.2E-09 60.3 9.6 82 70-159 66-163 (389)
191 PLN02213 sinapoylglucose-malat 98.0 0.0018 4E-08 50.3 17.5 58 213-271 235-316 (319)
192 COG2819 Predicted hydrolase of 98.0 0.00063 1.4E-08 50.1 13.3 40 119-158 135-174 (264)
193 PF02089 Palm_thioest: Palmito 97.9 5.2E-05 1.1E-09 56.4 6.6 103 53-156 4-116 (279)
194 PF07082 DUF1350: Protein of u 97.8 0.003 6.5E-08 46.1 14.7 96 53-153 16-122 (250)
195 PF07519 Tannase: Tannase and 97.8 0.001 2.2E-08 54.4 13.8 84 74-158 52-152 (474)
196 TIGR03712 acc_sec_asp2 accesso 97.8 0.0053 1.2E-07 49.2 16.5 118 30-157 270-391 (511)
197 KOG2541 Palmitoyl protein thio 97.8 0.00021 4.6E-09 52.1 8.1 97 55-155 24-127 (296)
198 KOG3967 Uncharacterized conser 97.8 0.0011 2.5E-08 46.7 11.1 136 21-159 68-230 (297)
199 KOG2183 Prolylcarboxypeptidase 97.7 0.00026 5.6E-09 55.0 8.4 100 55-155 81-201 (492)
200 PF04083 Abhydro_lipase: Parti 97.7 0.00012 2.7E-09 41.3 4.8 48 23-71 10-59 (63)
201 cd00741 Lipase Lipase. Lipase 97.7 0.00015 3.2E-09 49.9 5.9 40 119-158 26-69 (153)
202 PF01764 Lipase_3: Lipase (cla 97.4 0.00035 7.5E-09 47.2 5.2 37 106-142 49-85 (140)
203 PF06259 Abhydrolase_8: Alpha/ 97.4 0.009 2E-07 41.8 11.9 106 51-156 16-144 (177)
204 KOG1516 Carboxylesterase and r 97.4 0.0019 4E-08 54.5 10.0 121 33-157 94-233 (545)
205 KOG2182 Hydrolytic enzymes of 97.3 0.0028 6E-08 50.7 9.4 106 51-158 83-209 (514)
206 PF11187 DUF2974: Protein of u 97.3 0.0008 1.7E-08 49.1 6.0 49 108-157 72-124 (224)
207 KOG2521 Uncharacterized conser 97.2 0.045 9.7E-07 42.6 14.7 61 212-272 226-290 (350)
208 KOG1202 Animal-type fatty acid 97.2 0.035 7.5E-07 49.8 15.1 97 51-157 2120-2220(2376)
209 COG4287 PqaA PhoPQ-activated p 97.2 0.0016 3.4E-08 50.0 6.5 152 113-269 226-384 (507)
210 PF06441 EHN: Epoxide hydrolas 97.1 0.001 2.3E-08 42.5 4.5 45 24-74 67-111 (112)
211 PLN02517 phosphatidylcholine-s 97.1 0.0021 4.6E-08 52.9 6.6 85 69-158 156-265 (642)
212 cd00519 Lipase_3 Lipase (class 97.0 0.0014 3.1E-08 48.4 5.0 24 119-142 126-149 (229)
213 KOG4388 Hormone-sensitive lipa 97.0 0.0048 1E-07 50.4 7.8 105 52-156 394-508 (880)
214 PF01083 Cutinase: Cutinase; 96.8 0.0059 1.3E-07 43.1 6.6 74 82-157 40-123 (179)
215 KOG2369 Lecithin:cholesterol a 96.8 0.0036 7.8E-08 49.8 5.9 86 69-155 124-224 (473)
216 COG4947 Uncharacterized protei 96.8 0.0088 1.9E-07 40.8 6.6 45 114-158 94-138 (227)
217 PLN02162 triacylglycerol lipas 96.7 0.0059 1.3E-07 48.9 6.3 33 108-140 265-297 (475)
218 PLN00413 triacylglycerol lipas 96.7 0.0062 1.3E-07 48.9 6.4 35 106-140 269-303 (479)
219 PF11288 DUF3089: Protein of u 96.6 0.0054 1.2E-07 43.8 5.1 66 77-142 41-116 (207)
220 COG2830 Uncharacterized protei 96.5 0.033 7.2E-07 37.7 7.9 76 56-155 13-89 (214)
221 KOG1283 Serine carboxypeptidas 96.5 0.02 4.3E-07 43.4 7.5 128 29-157 7-167 (414)
222 PLN02454 triacylglycerol lipas 96.5 0.0051 1.1E-07 48.7 4.7 33 109-141 214-248 (414)
223 PLN02571 triacylglycerol lipas 96.4 0.0056 1.2E-07 48.5 4.6 37 105-141 208-246 (413)
224 KOG4372 Predicted alpha/beta h 96.3 0.012 2.5E-07 46.1 5.5 89 51-140 77-169 (405)
225 PLN02408 phospholipase A1 96.2 0.0088 1.9E-07 46.8 4.7 35 108-142 185-221 (365)
226 PF05277 DUF726: Protein of un 96.2 0.022 4.8E-07 44.4 6.5 41 119-159 218-263 (345)
227 PLN02934 triacylglycerol lipas 96.0 0.012 2.7E-07 47.7 4.8 35 106-140 306-340 (515)
228 PLN02310 triacylglycerol lipas 95.8 0.03 6.6E-07 44.5 6.1 36 106-141 190-229 (405)
229 PLN02324 triacylglycerol lipas 95.7 0.018 3.9E-07 45.7 4.5 34 108-141 200-235 (415)
230 PLN02802 triacylglycerol lipas 95.6 0.022 4.7E-07 46.3 4.6 36 107-142 314-351 (509)
231 PLN02753 triacylglycerol lipas 95.4 0.026 5.7E-07 46.1 4.5 35 107-141 293-332 (531)
232 PF06850 PHB_depo_C: PHB de-po 95.3 0.082 1.8E-06 37.3 5.9 60 213-272 136-202 (202)
233 PLN02719 triacylglycerol lipas 95.3 0.032 7E-07 45.4 4.5 35 107-141 279-318 (518)
234 PLN02761 lipase class 3 family 95.2 0.034 7.3E-07 45.4 4.5 35 107-141 274-314 (527)
235 PLN03037 lipase class 3 family 95.2 0.034 7.4E-07 45.4 4.5 35 107-141 300-338 (525)
236 PF03283 PAE: Pectinacetyleste 94.7 0.64 1.4E-05 37.0 10.3 98 120-223 155-260 (361)
237 KOG4569 Predicted lipase [Lipi 94.6 0.061 1.3E-06 42.2 4.4 37 105-141 155-191 (336)
238 PLN02847 triacylglycerol lipas 94.6 0.069 1.5E-06 44.4 4.7 23 119-141 249-271 (633)
239 KOG4540 Putative lipase essent 94.5 0.11 2.4E-06 38.9 5.2 41 113-155 268-308 (425)
240 COG5153 CVT17 Putative lipase 94.5 0.11 2.4E-06 38.9 5.2 41 113-155 268-308 (425)
241 PF09949 DUF2183: Uncharacteri 93.9 0.95 2.1E-05 28.4 8.1 83 69-151 11-97 (100)
242 KOG2029 Uncharacterized conser 93.9 0.14 3.1E-06 42.4 5.1 53 103-155 505-571 (697)
243 KOG4389 Acetylcholinesterase/B 92.9 0.49 1.1E-05 38.5 6.6 118 34-157 119-256 (601)
244 PF08237 PE-PPE: PE-PPE domain 92.1 0.9 1.9E-05 33.5 6.7 41 102-142 27-69 (225)
245 PF09994 DUF2235: Uncharacteri 89.3 4.6 9.9E-05 31.0 8.7 29 114-142 84-113 (277)
246 COG3673 Uncharacterized conser 86.7 12 0.00027 29.1 9.2 91 51-141 28-142 (423)
247 KOG2385 Uncharacterized conser 85.0 3.7 7.9E-05 34.0 6.1 43 119-161 445-492 (633)
248 PRK12467 peptide synthase; Pro 84.6 6.9 0.00015 42.0 9.3 98 53-153 3691-3792(3956)
249 COG4822 CbiK Cobalamin biosynt 83.9 11 0.00023 27.5 7.3 63 51-126 135-199 (265)
250 PF10081 Abhydrolase_9: Alpha/ 83.6 14 0.0003 28.3 8.2 84 74-158 53-149 (289)
251 PF00698 Acyl_transf_1: Acyl t 76.3 2.2 4.9E-05 33.4 2.4 31 111-141 74-104 (318)
252 cd01714 ETF_beta The electron 76.0 12 0.00027 27.1 5.9 53 82-142 78-134 (202)
253 COG3933 Transcriptional antite 75.7 33 0.00071 28.2 8.4 75 52-137 107-181 (470)
254 smart00827 PKS_AT Acyl transfe 75.3 4 8.7E-05 31.6 3.5 30 111-140 72-101 (298)
255 cd07198 Patatin Patatin-like p 74.8 5 0.00011 28.1 3.6 32 112-143 17-48 (172)
256 PF10605 3HBOH: 3HB-oligomer h 74.1 3.1 6.6E-05 35.2 2.6 38 123-160 287-325 (690)
257 COG1448 TyrB Aspartate/tyrosin 74.1 33 0.00072 27.6 7.9 87 54-154 171-263 (396)
258 cd07225 Pat_PNPLA6_PNPLA7 Pata 73.9 5 0.00011 31.3 3.7 62 70-142 3-64 (306)
259 cd07207 Pat_ExoU_VipD_like Exo 73.7 5.1 0.00011 28.6 3.5 31 112-142 18-48 (194)
260 PRK10279 hypothetical protein; 73.2 4.8 0.0001 31.3 3.4 32 111-142 23-54 (300)
261 TIGR03131 malonate_mdcH malona 73.1 4.7 0.0001 31.2 3.4 30 111-140 66-95 (295)
262 cd07210 Pat_hypo_W_succinogene 71.7 6.8 0.00015 28.9 3.8 30 113-142 20-49 (221)
263 PF06309 Torsin: Torsin; Inte 69.6 9.3 0.0002 25.2 3.6 19 51-69 49-67 (127)
264 TIGR00128 fabD malonyl CoA-acy 68.7 6.4 0.00014 30.3 3.3 29 113-141 74-103 (290)
265 PF06792 UPF0261: Uncharacteri 68.5 64 0.0014 26.4 10.3 95 56-151 3-125 (403)
266 cd07227 Pat_Fungal_NTE1 Fungal 68.4 7.5 0.00016 29.7 3.5 32 111-142 28-59 (269)
267 cd07228 Pat_NTE_like_bacteria 68.1 8 0.00017 27.2 3.4 30 114-143 21-50 (175)
268 COG1752 RssA Predicted esteras 67.7 7.4 0.00016 30.3 3.5 32 111-142 29-60 (306)
269 cd07209 Pat_hypo_Ecoli_Z1214_l 65.6 9.5 0.00021 28.0 3.5 32 112-143 17-48 (215)
270 cd07205 Pat_PNPLA6_PNPLA7_NTE1 64.9 12 0.00026 26.3 3.8 30 113-142 20-49 (175)
271 KOG1752 Glutaredoxin and relat 63.4 36 0.00078 21.7 5.6 75 52-142 12-90 (104)
272 COG0541 Ffh Signal recognition 63.3 86 0.0019 26.0 9.0 71 74-152 174-247 (451)
273 COG1073 Hydrolases of the alph 61.4 0.66 1.4E-05 35.5 -3.4 37 52-89 47-84 (299)
274 cd07230 Pat_TGL4-5_like Triacy 59.2 9.2 0.0002 31.4 2.6 33 113-145 93-125 (421)
275 PRK02399 hypothetical protein; 58.7 1E+02 0.0022 25.3 9.9 94 58-151 6-127 (406)
276 cd07208 Pat_hypo_Ecoli_yjju_li 57.9 17 0.00036 27.7 3.8 30 115-144 20-50 (266)
277 cd07232 Pat_PLPL Patain-like p 56.7 5.9 0.00013 32.3 1.2 37 113-149 87-123 (407)
278 PF04084 ORC2: Origin recognit 56.5 88 0.0019 24.9 7.5 32 103-134 118-150 (326)
279 cd07229 Pat_TGL3_like Triacylg 56.3 12 0.00026 30.3 2.8 36 112-147 102-137 (391)
280 PF12242 Eno-Rase_NADH_b: NAD( 56.1 24 0.00053 20.9 3.3 24 119-142 38-61 (78)
281 TIGR03709 PPK2_rel_1 polyphosp 56.0 66 0.0014 24.6 6.4 69 53-132 54-125 (264)
282 cd07231 Pat_SDP1-like Sugar-De 55.6 7.8 0.00017 30.2 1.6 30 113-142 88-117 (323)
283 TIGR03707 PPK2_P_aer polyphosp 55.4 78 0.0017 23.6 6.6 69 53-133 29-101 (230)
284 COG4850 Uncharacterized conser 55.4 34 0.00073 26.9 4.8 97 55-154 214-313 (373)
285 TIGR02816 pfaB_fam PfaB family 55.3 14 0.0003 31.4 3.1 31 112-142 255-286 (538)
286 COG3340 PepE Peptidase E [Amin 54.4 38 0.00083 24.8 4.7 37 53-89 31-70 (224)
287 cd07212 Pat_PNPLA9 Patatin-lik 54.2 26 0.00056 27.5 4.3 19 124-142 35-53 (312)
288 cd07224 Pat_like Patatin-like 53.2 22 0.00047 26.5 3.6 32 112-143 18-51 (233)
289 cd05312 NAD_bind_1_malic_enz N 52.9 77 0.0017 24.5 6.4 56 82-139 60-124 (279)
290 COG1576 Uncharacterized conser 51.2 79 0.0017 21.8 5.6 60 72-140 58-117 (155)
291 PF14253 AbiH: Bacteriophage a 50.9 20 0.00044 27.2 3.3 15 119-133 233-247 (270)
292 PF08484 Methyltransf_14: C-me 49.7 79 0.0017 22.0 5.6 47 108-154 54-102 (160)
293 COG0529 CysC Adenylylsulfate k 49.2 96 0.0021 22.2 6.4 39 51-89 19-59 (197)
294 cd07204 Pat_PNPLA_like Patatin 48.7 31 0.00067 25.9 3.8 20 124-143 34-53 (243)
295 PF02590 SPOUT_MTase: Predicte 48.1 57 0.0012 22.6 4.7 52 73-132 59-110 (155)
296 PF01583 APS_kinase: Adenylyls 48.0 64 0.0014 22.4 4.9 37 54-90 1-39 (156)
297 cd07206 Pat_TGL3-4-5_SDP1 Tria 47.5 24 0.00052 27.4 3.1 27 118-144 94-120 (298)
298 KOG0781 Signal recognition par 47.3 64 0.0014 27.1 5.4 63 82-152 467-538 (587)
299 PF11713 Peptidase_C80: Peptid 47.1 24 0.00051 24.5 2.7 44 90-133 62-116 (157)
300 PF00326 Peptidase_S9: Prolyl 46.1 71 0.0015 23.1 5.4 42 53-94 143-187 (213)
301 COG0218 Predicted GTPase [Gene 45.3 46 0.00099 24.1 4.0 58 210-271 134-198 (200)
302 cd01819 Patatin_and_cPLA2 Pata 44.9 38 0.00082 23.3 3.5 19 121-139 28-46 (155)
303 PF12641 Flavodoxin_3: Flavodo 44.0 1.1E+02 0.0024 21.3 5.6 58 213-271 41-98 (160)
304 PLN03019 carbonic anhydrase 43.9 44 0.00095 26.4 4.0 32 107-138 201-232 (330)
305 PRK05282 (alpha)-aspartyl dipe 43.7 1E+02 0.0022 23.1 5.8 37 53-90 30-70 (233)
306 cd07218 Pat_iPLA2 Calcium-inde 42.9 41 0.00089 25.3 3.7 20 124-143 33-52 (245)
307 PRK14194 bifunctional 5,10-met 42.4 49 0.0011 25.8 4.1 34 108-141 143-182 (301)
308 cd07221 Pat_PNPLA3 Patatin-lik 41.6 47 0.001 25.2 3.8 22 122-143 33-54 (252)
309 cd07220 Pat_PNPLA2 Patatin-lik 41.1 44 0.00095 25.3 3.6 21 123-143 38-58 (249)
310 PF10686 DUF2493: Protein of u 40.3 66 0.0014 18.7 3.5 12 53-64 30-41 (71)
311 cd00382 beta_CA Carbonic anhyd 40.3 56 0.0012 21.3 3.6 31 106-136 44-74 (119)
312 KOG2872 Uroporphyrinogen decar 40.2 1.4E+02 0.0031 23.2 5.9 69 53-129 251-336 (359)
313 COG1092 Predicted SAM-dependen 39.2 1.7E+02 0.0037 24.1 6.7 51 81-132 290-340 (393)
314 COG0331 FabD (acyl-carrier-pro 38.6 42 0.00091 26.3 3.3 22 119-140 83-104 (310)
315 COG3621 Patatin [General funct 38.5 80 0.0017 25.0 4.6 54 79-143 6-64 (394)
316 cd07211 Pat_PNPLA8 Patatin-lik 38.2 42 0.0009 26.3 3.3 17 124-140 44-60 (308)
317 PF00448 SRP54: SRP54-type pro 37.9 1.6E+02 0.0034 21.4 8.9 74 71-152 72-148 (196)
318 KOG2170 ATPase of the AAA+ sup 37.7 41 0.00088 26.3 2.9 18 51-68 106-123 (344)
319 PLN03014 carbonic anhydrase 37.5 67 0.0015 25.6 4.1 32 107-138 206-237 (347)
320 PRK14974 cell division protein 36.6 2.2E+02 0.0048 22.8 9.1 64 81-152 222-287 (336)
321 PRK06490 glutamine amidotransf 36.2 1.9E+02 0.004 21.8 8.6 33 107-139 71-103 (239)
322 PLN00416 carbonate dehydratase 36.0 92 0.002 23.8 4.6 33 107-139 126-158 (258)
323 PF03976 PPK2: Polyphosphate k 35.8 25 0.00055 26.1 1.6 38 53-90 29-68 (228)
324 KOG4287 Pectin acetylesterase 35.8 40 0.00086 26.8 2.6 24 200-223 258-281 (402)
325 cd07222 Pat_PNPLA4 Patatin-lik 35.4 55 0.0012 24.7 3.4 17 124-140 34-50 (246)
326 cd00883 beta_CA_cladeA Carboni 34.9 69 0.0015 22.9 3.6 32 107-138 67-98 (182)
327 KOG2495 NADH-dehydrogenase (ub 34.5 50 0.0011 27.2 3.1 39 50-94 51-91 (491)
328 PRK00103 rRNA large subunit me 34.3 1.6E+02 0.0035 20.5 5.6 54 73-134 59-112 (157)
329 COG3887 Predicted signaling pr 34.3 1.3E+02 0.0029 26.0 5.5 35 120-155 337-377 (655)
330 PLN03006 carbonate dehydratase 33.7 68 0.0015 25.0 3.6 32 107-138 158-189 (301)
331 cd07217 Pat17_PNPLA8_PNPLA9_li 33.6 36 0.00077 27.2 2.2 18 124-141 44-61 (344)
332 PF01734 Patatin: Patatin-like 33.6 39 0.00084 23.7 2.4 21 121-141 27-47 (204)
333 PRK04148 hypothetical protein; 33.6 95 0.0021 20.9 3.9 21 121-141 18-38 (134)
334 KOG2805 tRNA (5-methylaminomet 33.4 1.9E+02 0.0042 22.8 5.8 61 53-118 5-66 (377)
335 cd03379 beta_CA_cladeD Carboni 32.9 77 0.0017 21.5 3.5 28 106-133 41-68 (142)
336 PF02882 THF_DHG_CYH_C: Tetrah 32.8 95 0.0021 21.6 3.9 35 107-141 19-59 (160)
337 cd00762 NAD_bind_malic_enz NAD 32.8 1.9E+02 0.0041 22.1 5.7 57 82-140 60-126 (254)
338 cd01715 ETF_alpha The electron 32.7 1.4E+02 0.003 20.8 4.9 53 82-142 53-106 (168)
339 KOG1202 Animal-type fatty acid 32.4 97 0.0021 29.7 4.7 24 110-133 571-594 (2376)
340 PF03610 EIIA-man: PTS system 31.8 1.4E+02 0.0031 19.1 8.5 74 56-141 2-78 (116)
341 PF07521 RMMBL: RNA-metabolisi 31.7 79 0.0017 16.1 4.4 19 108-126 20-38 (43)
342 cd07213 Pat17_PNPLA8_PNPLA9_li 31.5 40 0.00087 26.1 2.2 19 124-142 37-55 (288)
343 KOG1252 Cystathionine beta-syn 31.3 2.8E+02 0.006 22.3 9.5 62 29-91 187-249 (362)
344 COG1506 DAP2 Dipeptidyl aminop 30.9 2.4E+02 0.0053 24.9 7.0 46 51-96 548-598 (620)
345 KOG1465 Translation initiation 30.9 1.6E+02 0.0034 23.1 5.0 30 56-88 164-195 (353)
346 KOG3179 Predicted glutamine sy 30.0 56 0.0012 23.7 2.4 38 103-140 74-111 (245)
347 KOG1578 Predicted carbonic anh 29.7 36 0.00077 25.8 1.5 34 108-141 141-174 (276)
348 PRK05665 amidotransferase; Pro 29.2 97 0.0021 23.3 3.8 35 105-139 74-108 (240)
349 COG0159 TrpA Tryptophan syntha 29.2 2.7E+02 0.0058 21.5 6.2 74 53-141 94-169 (265)
350 cd01985 ETF The electron trans 28.7 2.1E+02 0.0046 20.1 5.4 53 82-142 61-114 (181)
351 KOG1411 Aspartate aminotransfe 28.6 1E+02 0.0023 24.6 3.8 87 54-153 197-289 (427)
352 COG0279 GmhA Phosphoheptose is 28.5 1.2E+02 0.0025 21.4 3.7 72 58-133 44-121 (176)
353 cd00884 beta_CA_cladeB Carboni 28.3 1E+02 0.0022 22.2 3.6 32 107-138 73-104 (190)
354 PF07643 DUF1598: Protein of u 27.6 1.5E+02 0.0032 18.0 4.2 32 110-141 32-63 (84)
355 TIGR02884 spore_pdaA delta-lac 27.5 1E+02 0.0022 22.8 3.6 34 55-88 187-221 (224)
356 COG3023 ampD N-acetyl-anhydrom 27.5 90 0.0019 23.6 3.2 41 90-130 114-155 (257)
357 TIGR03607 patatin-related prot 27.3 1.1E+02 0.0025 27.4 4.3 22 119-140 64-85 (739)
358 PF02633 Creatininase: Creatin 26.8 2.1E+02 0.0046 21.4 5.2 68 72-140 43-120 (237)
359 PF10561 UPF0565: Uncharacteri 26.7 98 0.0021 24.2 3.4 22 121-142 193-214 (303)
360 PLN02154 carbonic anhydrase 26.7 1.2E+02 0.0026 23.6 3.8 32 107-138 152-183 (290)
361 PF00484 Pro_CA: Carbonic anhy 26.6 1.7E+02 0.0036 20.0 4.4 35 105-139 39-73 (153)
362 COG0518 GuaA GMP synthase - Gl 26.4 2.6E+02 0.0056 20.4 6.2 33 107-139 64-96 (198)
363 PF00091 Tubulin: Tubulin/FtsZ 26.2 2.2E+02 0.0049 20.8 5.2 25 111-135 114-138 (216)
364 PRK14179 bifunctional 5,10-met 26.2 1.5E+02 0.0032 23.1 4.3 34 108-141 142-181 (284)
365 cd07216 Pat17_PNPLA8_PNPLA9_li 26.2 42 0.00091 26.3 1.5 17 124-140 45-61 (309)
366 PRK07877 hypothetical protein; 25.8 1.8E+02 0.0038 26.3 5.2 38 116-155 103-140 (722)
367 PRK02910 light-independent pro 25.7 1.3E+02 0.0028 25.8 4.3 43 54-96 85-129 (519)
368 TIGR01425 SRP54_euk signal rec 25.7 4E+02 0.0087 22.3 9.1 63 81-151 182-246 (429)
369 PF06289 FlbD: Flagellar prote 25.4 1E+02 0.0022 17.4 2.5 33 239-272 26-58 (60)
370 KOG2316 Predicted ATPase (PP-l 25.0 74 0.0016 23.5 2.4 62 76-137 57-120 (277)
371 PF01118 Semialdhyde_dh: Semia 24.7 1.1E+02 0.0023 19.9 3.0 32 122-154 1-33 (121)
372 COG0031 CysK Cysteine synthase 24.7 3.5E+02 0.0076 21.3 10.7 122 27-154 142-291 (300)
373 PRK05368 homoserine O-succinyl 24.7 90 0.0019 24.5 3.0 31 111-141 124-154 (302)
374 COG1634 Uncharacterized Rossma 24.6 2.9E+02 0.0063 20.7 5.2 23 113-135 165-187 (232)
375 PF15566 Imm18: Immunity prote 24.6 1.2E+02 0.0025 16.5 2.5 31 104-134 4-34 (52)
376 cd07199 Pat17_PNPLA8_PNPLA9_li 24.5 1.3E+02 0.0028 22.8 3.8 18 124-141 37-54 (258)
377 PF00070 Pyr_redox: Pyridine n 24.3 1.6E+02 0.0034 17.2 4.0 31 122-155 1-31 (80)
378 PF13709 DUF4159: Domain of un 24.2 2.9E+02 0.0064 20.2 6.2 36 213-249 55-90 (207)
379 PRK03363 fixB putative electro 24.0 3.7E+02 0.0081 21.3 6.3 53 82-142 50-103 (313)
380 COG0288 CynT Carbonic anhydras 23.5 1E+02 0.0022 22.6 2.9 36 105-140 76-111 (207)
381 PF01012 ETF: Electron transfe 23.2 2.6E+02 0.0056 19.3 5.8 60 75-142 51-113 (164)
382 cd07219 Pat_PNPLA1 Patatin-lik 23.2 1.1E+02 0.0024 24.9 3.3 18 124-141 47-64 (382)
383 cd07214 Pat17_isozyme_like Pat 22.9 56 0.0012 26.2 1.7 18 124-141 46-63 (349)
384 TIGR03708 poly_P_AMP_trns poly 22.9 4.1E+02 0.0089 22.8 6.5 70 52-133 37-110 (493)
385 TIGR02873 spore_ylxY probable 22.8 1.1E+02 0.0023 23.6 3.0 32 56-88 232-264 (268)
386 PRK14188 bifunctional 5,10-met 22.8 1.7E+02 0.0037 22.9 4.1 34 108-141 142-181 (296)
387 KOG0736 Peroxisome assembly fa 22.7 6.2E+02 0.013 23.4 7.8 74 82-158 765-846 (953)
388 PRK14181 bifunctional 5,10-met 22.5 2.8E+02 0.006 21.7 5.1 45 108-153 137-187 (287)
389 PF14488 DUF4434: Domain of un 22.5 2.8E+02 0.0061 19.4 5.3 53 69-121 20-80 (166)
390 PRK10867 signal recognition pa 22.2 4.8E+02 0.01 21.9 10.1 14 81-94 183-196 (433)
391 PF05577 Peptidase_S28: Serine 22.1 78 0.0017 26.2 2.4 37 213-253 378-414 (434)
392 TIGR00064 ftsY signal recognit 22.0 3.8E+02 0.0082 20.7 8.6 67 78-152 151-225 (272)
393 COG2230 Cfa Cyclopropane fatty 21.8 2.7E+02 0.0059 21.7 4.9 48 104-152 54-104 (283)
394 PRK10437 carbonic anhydrase; P 21.8 1.7E+02 0.0036 21.8 3.7 32 107-138 77-108 (220)
395 cd03378 beta_CA_cladeC Carboni 21.7 1.9E+02 0.0041 20.0 3.8 29 107-135 78-106 (154)
396 COG0482 TrmU Predicted tRNA(5- 21.4 3.3E+02 0.0072 22.1 5.5 60 53-119 3-63 (356)
397 TIGR02813 omega_3_PfaA polyket 21.4 91 0.002 32.7 3.0 30 111-140 664-693 (2582)
398 COG3675 Predicted lipase [Lipi 21.4 64 0.0014 25.0 1.6 41 110-151 163-208 (332)
399 cd07215 Pat17_PNPLA8_PNPLA9_li 21.2 63 0.0014 25.6 1.7 17 124-140 43-59 (329)
400 PRK07053 glutamine amidotransf 21.1 3.6E+02 0.0079 20.2 6.5 31 109-139 70-100 (234)
401 COG3946 VirJ Type IV secretory 21.1 4.9E+02 0.011 21.7 7.2 99 54-152 48-153 (456)
402 PLN02733 phosphatidylcholine-s 20.8 51 0.0011 27.4 1.1 52 215-271 370-421 (440)
403 TIGR02764 spore_ybaN_pdaB poly 20.6 1E+02 0.0023 21.9 2.6 31 56-87 153-187 (191)
404 cd03131 GATase1_HTS Type 1 glu 20.6 43 0.00092 23.7 0.5 33 109-141 85-117 (175)
405 PF07931 CPT: Chloramphenicol 20.5 1.1E+02 0.0024 21.6 2.6 33 56-88 2-35 (174)
406 PF03575 Peptidase_S51: Peptid 20.5 51 0.0011 22.6 0.9 12 123-134 70-81 (154)
407 COG4667 Predicted esterase of 20.5 1E+02 0.0022 23.7 2.4 27 124-150 43-69 (292)
408 PRK13512 coenzyme A disulfide 20.3 3.5E+02 0.0075 22.6 5.8 44 108-154 136-179 (438)
409 PRK15219 carbonic anhydrase; P 20.3 1.7E+02 0.0037 22.2 3.6 32 107-138 129-160 (245)
410 PLN02752 [acyl-carrier protein 20.2 1E+02 0.0023 24.5 2.7 18 124-141 127-144 (343)
411 PRK14191 bifunctional 5,10-met 20.2 2E+02 0.0044 22.4 4.0 34 108-141 141-180 (285)
412 PRK10792 bifunctional 5,10-met 20.0 2E+02 0.0044 22.4 4.0 34 108-141 143-182 (285)
No 1
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=1.1e-36 Score=232.95 Aligned_cols=240 Identities=21% Similarity=0.308 Sum_probs=176.7
Q ss_pred CCCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCC---
Q 024042 23 AGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRS--- 99 (273)
Q Consensus 23 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~--- 99 (273)
...+.++++. +|.+++|...| + ++++|||+||++++. ..|+.+++.|+++|+|+++|+||||.|+.+.
T Consensus 6 ~~~~~~~~~~-~~~~i~y~~~G------~-~~~~vlllHG~~~~~-~~w~~~~~~L~~~~~vi~~DlpG~G~S~~~~~~~ 76 (294)
T PLN02824 6 PQVETRTWRW-KGYNIRYQRAG------T-SGPALVLVHGFGGNA-DHWRKNTPVLAKSHRVYAIDLLGYGYSDKPNPRS 76 (294)
T ss_pred CCCCCceEEE-cCeEEEEEEcC------C-CCCeEEEECCCCCCh-hHHHHHHHHHHhCCeEEEEcCCCCCCCCCCcccc
Confidence 3456778888 89999999875 2 347999999999999 9999999999988999999999999998653
Q ss_pred ----ccccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCC---c--chHHH----
Q 024042 100 ----IQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKR---G--DNEAL---- 166 (273)
Q Consensus 100 ----~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~---~--~~~~~---- 166 (273)
..++.+++++++.+++++++.++++++||||||.+++.++.++|++|+++|++++...... . .....
T Consensus 77 ~~~~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~ 156 (294)
T PLN02824 77 APPNSFYTFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAF 156 (294)
T ss_pred ccccccCCHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHH
Confidence 2478999999999999999999999999999999999999999999999999997542210 0 00100
Q ss_pred hhhhhh--------------hhhhhc----cCC---CChHHHHHHhh------------hhhccCCCCChhhHHhhhhcc
Q 024042 167 VKRANL--------------ERIDHL----MLP---ESASQLRTLTG------------LAVSKNLDIVPDFFFNDFVHD 213 (273)
Q Consensus 167 ~~~~~~--------------~~~~~~----~~~---~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~p 213 (273)
...... ...... ... ........... ..............+.++..|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 236 (294)
T PLN02824 157 QNLLRETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCP 236 (294)
T ss_pred HHHHhchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCC
Confidence 000000 000000 000 00001111000 000000011223446677889
Q ss_pred EEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 214 VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 214 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
+|+|+|++|..+|.+.++.+.+.. ++.++++++++||+++.|+|+++.+.|.+|++++
T Consensus 237 ~lvi~G~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 237 VLIAWGEKDPWEPVELGRAYANFD-AVEDFIVLPGVGHCPQDEAPELVNPLIESFVARH 294 (294)
T ss_pred eEEEEecCCCCCChHHHHHHHhcC-CccceEEeCCCCCChhhhCHHHHHHHHHHHHhcC
Confidence 999999999999999998887766 7789999999999999999999999999999864
No 2
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=6.8e-36 Score=226.44 Aligned_cols=237 Identities=20% Similarity=0.252 Sum_probs=174.2
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHH
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTEL 105 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~ 105 (273)
-.+++++ +|.+++|+..+ .+.++++|||+||++++. ..|..+++.|.+.|+|+++|+||||.|+.+...++.+
T Consensus 3 ~~~~~~~-~~~~~~~~~~~-----~~~~~~plvllHG~~~~~-~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~ 75 (276)
T TIGR02240 3 IFRTIDL-DGQSIRTAVRP-----GKEGLTPLLIFNGIGANL-ELVFPFIEALDPDLEVIAFDVPGVGGSSTPRHPYRFP 75 (276)
T ss_pred eEEEecc-CCcEEEEEEec-----CCCCCCcEEEEeCCCcch-HHHHHHHHHhccCceEEEECCCCCCCCCCCCCcCcHH
Confidence 3567777 88899998752 133457999999999999 8999999999888999999999999998766667899
Q ss_pred HHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCC--cchHHHhhhhhhhhh--------
Q 024042 106 FQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKR--GDNEALVKRANLERI-------- 175 (273)
Q Consensus 106 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~-------- 175 (273)
.+++++.++++.++.++++|+||||||.+|+.+|.++|++++++|+++++..... ...............
T Consensus 76 ~~~~~~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (276)
T TIGR02240 76 GLAKLAARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPSHGIH 155 (276)
T ss_pred HHHHHHHHHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhhccccccc
Confidence 9999999999999999999999999999999999999999999999998764321 101100000000000
Q ss_pred --hhccC---CCChHHHHHHhhhhh-----------ccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcC
Q 024042 176 --DHLML---PESASQLRTLTGLAV-----------SKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGK 239 (273)
Q Consensus 176 --~~~~~---~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~ 239 (273)
..... ............... ...........+.++..|+|+++|++|+++|++..+.+.+.+ +
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~-~ 234 (276)
T TIGR02240 156 IAPDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRI-P 234 (276)
T ss_pred hhhhhccceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhC-C
Confidence 00000 000000000000000 000011112335677789999999999999999999999999 8
Q ss_pred CcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 240 KARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 240 ~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
+.+++++++ ||+.+.++|+++++.|.+|+++
T Consensus 235 ~~~~~~i~~-gH~~~~e~p~~~~~~i~~fl~~ 265 (276)
T TIGR02240 235 NAELHIIDD-GHLFLITRAEAVAPIIMKFLAE 265 (276)
T ss_pred CCEEEEEcC-CCchhhccHHHHHHHHHHHHHH
Confidence 999999984 9999999999999999999975
No 3
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=4.1e-35 Score=224.38 Aligned_cols=239 Identities=15% Similarity=0.231 Sum_probs=171.5
Q ss_pred CCCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccc
Q 024042 23 AGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQR 102 (273)
Q Consensus 23 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~ 102 (273)
.+++.+++++ +|.+++|...| ++++|||+||++++. ..|+.+++.|.+.++|+++|+||+|.|+.+...+
T Consensus 5 ~~~~~~~~~~-~g~~i~y~~~G--------~g~~vvllHG~~~~~-~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~ 74 (295)
T PRK03592 5 PPGEMRRVEV-LGSRMAYIETG--------EGDPIVFLHGNPTSS-YLWRNIIPHLAGLGRCLAPDLIGMGASDKPDIDY 74 (295)
T ss_pred CCCcceEEEE-CCEEEEEEEeC--------CCCEEEEECCCCCCH-HHHHHHHHHHhhCCEEEEEcCCCCCCCCCCCCCC
Confidence 3556677887 89999999875 357999999999998 9999999999888999999999999998876678
Q ss_pred cHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCc--chH---HHhhhhhhhh---
Q 024042 103 TELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRG--DNE---ALVKRANLER--- 174 (273)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~--~~~---~~~~~~~~~~--- 174 (273)
+..++++++.+++++++.++++++|||+||.+|+.++.++|++++++|++++....... ... ..........
T Consensus 75 ~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (295)
T PRK03592 75 TFADHARYLDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGE 154 (295)
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCccccc
Confidence 99999999999999999999999999999999999999999999999999974322110 000 0010000000
Q ss_pred ---------hhhccC-----CCChHHHHHHhhhh-----------hccC--CCCC----------hhhHHhhhhccEEEE
Q 024042 175 ---------IDHLML-----PESASQLRTLTGLA-----------VSKN--LDIV----------PDFFFNDFVHDVLIV 217 (273)
Q Consensus 175 ---------~~~~~~-----~~~~~~~~~~~~~~-----------~~~~--~~~~----------~~~~~~~~~~p~l~i 217 (273)
...... .............. +... .... ....+.++.+|+|+|
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii 234 (295)
T PRK03592 155 EMVLEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLI 234 (295)
T ss_pred ccccchhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEE
Confidence 000000 00011010000000 0000 0000 012234567799999
Q ss_pred ecCCCCCCChHHHHHHH-HHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 218 WGDQDQIFPLKMATELK-ELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 218 ~g~~D~~~~~~~~~~~~-~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
+|++|.++++.....+. +.. ++.++++++++||+++.++|+++.+.|.+|+++.
T Consensus 235 ~G~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~ 289 (295)
T PRK03592 235 NAEPGAILTTGAIRDWCRSWP-NQLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRL 289 (295)
T ss_pred eccCCcccCcHHHHHHHHHhh-hhcceeeccCcchhhhhcCHHHHHHHHHHHHHHh
Confidence 99999999555454544 445 7899999999999999999999999999999864
No 4
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1.1e-34 Score=222.48 Aligned_cols=242 Identities=19% Similarity=0.291 Sum_probs=171.6
Q ss_pred hhCCCceeEEecCCc-----ceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCC
Q 024042 21 ASAGLSSQTIDIDDE-----TTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGH 94 (273)
Q Consensus 21 ~~~~~~~~~~~~~~g-----~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~ 94 (273)
....+..+++++ ++ .+++|...| ++++|+|||+||++++. ..|..+++.|++. |+|+++|+||||.
T Consensus 15 ~~~~~~~~~~~~-~~~~~~~~~i~y~~~G------~~~~~~lvliHG~~~~~-~~w~~~~~~L~~~gy~vi~~Dl~G~G~ 86 (302)
T PRK00870 15 PDYPFAPHYVDV-DDGDGGPLRMHYVDEG------PADGPPVLLLHGEPSWS-YLYRKMIPILAAAGHRVIAPDLIGFGR 86 (302)
T ss_pred cCCCCCceeEee-cCCCCceEEEEEEecC------CCCCCEEEEECCCCCch-hhHHHHHHHHHhCCCEEEEECCCCCCC
Confidence 344567788888 45 679999876 33568999999999888 8999999999865 9999999999999
Q ss_pred CCCCC--ccccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCc-chHHHhhhhh
Q 024042 95 STTRS--IQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRG-DNEALVKRAN 171 (273)
Q Consensus 95 s~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~-~~~~~~~~~~ 171 (273)
|+.+. ..++.+++++++.+++++++.++++++|||+||.+|+.++.++|++++++|++++....... ..........
T Consensus 87 S~~~~~~~~~~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 166 (302)
T PRK00870 87 SDKPTRREDYTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRA 166 (302)
T ss_pred CCCCCCcccCCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhc
Confidence 97654 34688999999999999999999999999999999999999999999999999875332111 0000000000
Q ss_pred ---------hhhhh-hcc-CCCChHHHHHHhh--------h---hhc-----cCCC--C-Ch---hhHHhhhhccEEEEe
Q 024042 172 ---------LERID-HLM-LPESASQLRTLTG--------L---AVS-----KNLD--I-VP---DFFFNDFVHDVLIVW 218 (273)
Q Consensus 172 ---------~~~~~-~~~-~~~~~~~~~~~~~--------~---~~~-----~~~~--~-~~---~~~~~~~~~p~l~i~ 218 (273)
..... ... ............. . ... .... . .. ...+.++..|+++|+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~ 246 (302)
T PRK00870 167 FSQYSPVLPVGRLVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAF 246 (302)
T ss_pred ccccCchhhHHHHhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEe
Confidence 00000 000 0001011111000 0 000 0000 0 00 012356677999999
Q ss_pred cCCCCCCChHHHHHHHHHhcCCcE---EEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 219 GDQDQIFPLKMATELKELLGKKAR---LEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 219 g~~D~~~~~~~~~~~~~~~~~~~~---~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
|++|.++|.+. +.+.+.+ ++.+ +.+++++||+++.++|+++.+.|.+|++++
T Consensus 247 G~~D~~~~~~~-~~~~~~~-~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 247 SDSDPITGGGD-AILQKRI-PGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred cCCCCcccCch-HHHHhhc-ccccccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 99999999866 7888888 6655 789999999999999999999999999875
No 5
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=4e-34 Score=223.38 Aligned_cols=240 Identities=20% Similarity=0.311 Sum_probs=166.4
Q ss_pred eeEEecCCcc-eEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCC-ccccH
Q 024042 27 SQTIDIDDET-TLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRS-IQRTE 104 (273)
Q Consensus 27 ~~~~~~~~g~-~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~-~~~~~ 104 (273)
.++++. +|. +++|...|.. .....+|+|||+||++++. ..|..+++.|+++|+|+++|+||||.|+.+. ..++.
T Consensus 63 ~~~~~~-~g~~~i~Y~~~G~g--~~~~~gp~lvllHG~~~~~-~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~ 138 (360)
T PLN02679 63 CKKWKW-KGEYSINYLVKGSP--EVTSSGPPVLLVHGFGASI-PHWRRNIGVLAKNYTVYAIDLLGFGASDKPPGFSYTM 138 (360)
T ss_pred CceEEE-CCceeEEEEEecCc--ccCCCCCeEEEECCCCCCH-HHHHHHHHHHhcCCEEEEECCCCCCCCCCCCCccccH
Confidence 345666 555 8999987610 0011458999999999998 9999999999888999999999999998654 35788
Q ss_pred HHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHH-hCCcccceEEEecCCCCCCCcc--hHHHh----------hhh-
Q 024042 105 LFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMAR-MWPERVEKVVIASSGVNMKRGD--NEALV----------KRA- 170 (273)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~~~v~~~v~~~~~~~~~~~~--~~~~~----------~~~- 170 (273)
+++++++.+++++++.++++|+||||||.+++.++. .+|++|+++|++++........ ..... ...
T Consensus 139 ~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (360)
T PLN02679 139 ETWAELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLL 218 (360)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHh
Confidence 999999999999999999999999999999998887 4799999999999764321100 00000 000
Q ss_pred ----------h----hhhhhh----ccCC---CChHHHHHHh------------hhhhccCCCCChhhHHhhhhccEEEE
Q 024042 171 ----------N----LERIDH----LMLP---ESASQLRTLT------------GLAVSKNLDIVPDFFFNDFVHDVLIV 217 (273)
Q Consensus 171 ----------~----~~~~~~----~~~~---~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~p~l~i 217 (273)
. ...+.. .... .......... ...............+.++..|+|++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii 298 (360)
T PLN02679 219 KQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVL 298 (360)
T ss_pred hchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEE
Confidence 0 000000 0000 0000000000 00000000111223456677899999
Q ss_pred ecCCCCCCChHH-----HHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 218 WGDQDQIFPLKM-----ATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 218 ~g~~D~~~~~~~-----~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
+|++|.++|.+. .+.+.+.+ ++.++++++++||+++.|+|+++.+.|.+||++
T Consensus 299 ~G~~D~~~p~~~~~~~~~~~l~~~i-p~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~ 356 (360)
T PLN02679 299 WGDQDPFTPLDGPVGKYFSSLPSQL-PNVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQ 356 (360)
T ss_pred EeCCCCCcCchhhHHHHHHhhhccC-CceEEEEcCCCCCCccccCHHHHHHHHHHHHHh
Confidence 999999998763 23455566 889999999999999999999999999999975
No 6
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1.1e-33 Score=214.64 Aligned_cols=235 Identities=19% Similarity=0.269 Sum_probs=166.7
Q ss_pred CCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCc-cc
Q 024042 24 GLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSI-QR 102 (273)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~-~~ 102 (273)
.++.+.+++ +|.+++|...| ++++|||+||++.+. ..|..+.+.|.++|+|+++|+||||.|+.+.. .+
T Consensus 13 ~~~~~~~~~-~~~~i~y~~~G--------~~~~iv~lHG~~~~~-~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~ 82 (286)
T PRK03204 13 PFESRWFDS-SRGRIHYIDEG--------TGPPILLCHGNPTWS-FLYRDIIVALRDRFRCVAPDYLGFGLSERPSGFGY 82 (286)
T ss_pred cccceEEEc-CCcEEEEEECC--------CCCEEEEECCCCccH-HHHHHHHHHHhCCcEEEEECCCCCCCCCCCCcccc
Confidence 467788888 78899998875 357999999999887 88999999998889999999999999986543 46
Q ss_pred cHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhh-h----hh-----
Q 024042 103 TELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKR-A----NL----- 172 (273)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~-~----~~----- 172 (273)
+.+++++++.+++++++.++++++||||||.+++.++..+|++++++|++++............... . ..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (286)
T PRK03204 83 QIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAILR 162 (286)
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhccccchhhhhh
Confidence 7889999999999999999999999999999999999999999999999877542211100000000 0 00
Q ss_pred -hhh-hhcc-----CCCChHHHHHHhhh------------hhccCCCCC--hhhH---Hhh--hhccEEEEecCCCCCCC
Q 024042 173 -ERI-DHLM-----LPESASQLRTLTGL------------AVSKNLDIV--PDFF---FND--FVHDVLIVWGDQDQIFP 226 (273)
Q Consensus 173 -~~~-~~~~-----~~~~~~~~~~~~~~------------~~~~~~~~~--~~~~---~~~--~~~p~l~i~g~~D~~~~ 226 (273)
... ...+ ..........+... ......... .... ..+ ...|+++|+|++|.+++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~ 242 (286)
T PRK03204 163 RNFFVERLIPAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFR 242 (286)
T ss_pred hhHHHHHhccccccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccC
Confidence 000 0000 00011111111000 000000000 0000 001 15799999999999886
Q ss_pred hH-HHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHh
Q 024042 227 LK-MATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFL 269 (273)
Q Consensus 227 ~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 269 (273)
+. ..+.+.+.+ ++.++++++++||+++.++|+++.+.|.+||
T Consensus 243 ~~~~~~~~~~~i-p~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 243 PKTILPRLRATF-PDHVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred cHHHHHHHHHhc-CCCeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 54 578888888 8999999999999999999999999999997
No 7
>PLN02578 hydrolase
Probab=100.00 E-value=5.3e-33 Score=216.90 Aligned_cols=231 Identities=23% Similarity=0.376 Sum_probs=169.4
Q ss_pred eEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHH
Q 024042 28 QTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQ 107 (273)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~ 107 (273)
..+.. +|.+++|...+ ++|+||++||++++. ..|..+++.|+++|+|+++|+||+|.|+.+...++...+
T Consensus 69 ~~~~~-~~~~i~Y~~~g--------~g~~vvliHG~~~~~-~~w~~~~~~l~~~~~v~~~D~~G~G~S~~~~~~~~~~~~ 138 (354)
T PLN02578 69 NFWTW-RGHKIHYVVQG--------EGLPIVLIHGFGASA-FHWRYNIPELAKKYKVYALDLLGFGWSDKALIEYDAMVW 138 (354)
T ss_pred eEEEE-CCEEEEEEEcC--------CCCeEEEECCCCCCH-HHHHHHHHHHhcCCEEEEECCCCCCCCCCcccccCHHHH
Confidence 33444 67889988764 457899999999998 999999999988899999999999999987777888999
Q ss_pred HHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcch-------------HH-Hhhhhh--
Q 024042 108 AASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN-------------EA-LVKRAN-- 171 (273)
Q Consensus 108 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~-------------~~-~~~~~~-- 171 (273)
++++.++++.+..++++++|||+||.+|+.+|.++|++++++|++++......... .. ......
T Consensus 139 a~~l~~~i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (354)
T PLN02578 139 RDQVADFVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEW 218 (354)
T ss_pred HHHHHHHHHHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHH
Confidence 99999999999889999999999999999999999999999999987543221100 00 000000
Q ss_pred h---------------hhh----hhccCCC--ChHH-HH----------------HHhhhhhccCCCCChhhHHhhhhcc
Q 024042 172 L---------------ERI----DHLMLPE--SASQ-LR----------------TLTGLAVSKNLDIVPDFFFNDFVHD 213 (273)
Q Consensus 172 ~---------------~~~----~~~~~~~--~~~~-~~----------------~~~~~~~~~~~~~~~~~~~~~~~~p 213 (273)
. ... ....... .... .. ..................+.++..|
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 298 (354)
T PLN02578 219 FQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCP 298 (354)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCC
Confidence 0 000 0000000 0000 00 0000000001111223455677889
Q ss_pred EEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhc
Q 024042 214 VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 214 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
+++++|++|.+++.+.++.+.+.+ ++.+++.+ ++||+++.|+|+++.+.|.+|++
T Consensus 299 vLiI~G~~D~~v~~~~~~~l~~~~-p~a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 299 LLLLWGDLDPWVGPAKAEKIKAFY-PDTTLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred EEEEEeCCCCCCCHHHHHHHHHhC-CCCEEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 999999999999999999999998 89999999 59999999999999999999986
No 8
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=100.00 E-value=4.1e-33 Score=212.06 Aligned_cols=236 Identities=18% Similarity=0.215 Sum_probs=171.3
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCc-cccH
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSI-QRTE 104 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~-~~~~ 104 (273)
..+.+++ +|.+++|...+ ..++|+|||+||++++. ..|..+.+.|+++|+|+++|+||||.|..+.. .++.
T Consensus 7 ~~~~~~~-~~~~~~~~~~g------~~~~~~vv~~hG~~~~~-~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~ 78 (278)
T TIGR03056 7 CSRRVTV-GPFHWHVQDMG------PTAGPLLLLLHGTGAST-HSWRDLMPPLARSFRVVAPDLPGHGFTRAPFRFRFTL 78 (278)
T ss_pred ccceeeE-CCEEEEEEecC------CCCCCeEEEEcCCCCCH-HHHHHHHHHHhhCcEEEeecCCCCCCCCCccccCCCH
Confidence 3456677 89999998886 34568999999999998 89999999998889999999999999986655 5789
Q ss_pred HHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcch----HHHhhhh-----h----
Q 024042 105 LFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN----EALVKRA-----N---- 171 (273)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~----~~~~~~~-----~---- 171 (273)
+.+++++.+++++++.++++++||||||.+++.++.++|++++++|++++......... ....... .
T Consensus 79 ~~~~~~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (278)
T TIGR03056 79 PSMAEDLSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMM 158 (278)
T ss_pred HHHHHHHHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhcccchHHH
Confidence 99999999999999889999999999999999999999999999999987543221100 0000000 0
Q ss_pred ------hhhhhhcc-------CCCChHHHHHHhhhh--------hccCCCC-ChhhHHhhhhccEEEEecCCCCCCChHH
Q 024042 172 ------LERIDHLM-------LPESASQLRTLTGLA--------VSKNLDI-VPDFFFNDFVHDVLIVWGDQDQIFPLKM 229 (273)
Q Consensus 172 ------~~~~~~~~-------~~~~~~~~~~~~~~~--------~~~~~~~-~~~~~~~~~~~p~l~i~g~~D~~~~~~~ 229 (273)
........ ............... ....... .....+.++..|+++++|++|..+|.+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~ 238 (278)
T TIGR03056 159 SRGAADQQRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDE 238 (278)
T ss_pred HhhcccCcchhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCHHH
Confidence 00000000 000000000000000 0000000 0012234566799999999999999999
Q ss_pred HHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhc
Q 024042 230 ATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
.+.+.+.+ ++++++.++++||+++.++|+++.+.|.+|++
T Consensus 239 ~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 239 SKRAATRV-PTATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred HHHHHHhc-cCCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 99999888 89999999999999999999999999999985
No 9
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=4e-33 Score=203.58 Aligned_cols=243 Identities=21% Similarity=0.355 Sum_probs=177.6
Q ss_pred hhCCCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCC
Q 024042 21 ASAGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRS 99 (273)
Q Consensus 21 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~ 99 (273)
...+++..+++. +|.+++|.+.+ .+++|.|+++||+.... ..|+.....|+.. |+|+++|+||+|.|+.+.
T Consensus 18 ~~~~~~hk~~~~-~gI~~h~~e~g------~~~gP~illlHGfPe~w-yswr~q~~~la~~~~rviA~DlrGyG~Sd~P~ 89 (322)
T KOG4178|consen 18 NLSAISHKFVTY-KGIRLHYVEGG------PGDGPIVLLLHGFPESW-YSWRHQIPGLASRGYRVIAPDLRGYGFSDAPP 89 (322)
T ss_pred ChhhcceeeEEE-ccEEEEEEeec------CCCCCEEEEEccCCccc-hhhhhhhhhhhhcceEEEecCCCCCCCCCCCC
Confidence 445677888888 88999999887 78899999999999999 9999999999998 999999999999999776
Q ss_pred c--cccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHH-hhhhh----h
Q 024042 100 I--QRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEAL-VKRAN----L 172 (273)
Q Consensus 100 ~--~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~-~~~~~----~ 172 (273)
. .++....+.++..++++++.++++++||+||+.+|+.++..+|++++++|.++.....+....... ..... .
T Consensus 90 ~~~~Yt~~~l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~ 169 (322)
T KOG4178|consen 90 HISEYTIDELVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYI 169 (322)
T ss_pred CcceeeHHHHHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCcccee
Confidence 5 579999999999999999999999999999999999999999999999999987665221110000 00000 0
Q ss_pred ------------------hhhhh----------ccCC---------CChHHHHHHhhhh----------hccCCCCCh--
Q 024042 173 ------------------ERIDH----------LMLP---------ESASQLRTLTGLA----------VSKNLDIVP-- 203 (273)
Q Consensus 173 ------------------~~~~~----------~~~~---------~~~~~~~~~~~~~----------~~~~~~~~~-- 203 (273)
..... ...+ .....++...... ++++.....
T Consensus 170 ~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a 249 (322)
T KOG4178|consen 170 CLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEA 249 (322)
T ss_pred EeccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchh
Confidence 00000 0000 0011111111110 111111111
Q ss_pred -hhHHhhhhccEEEEecCCCCCCChH-HHHHHHHHhcCCc-EEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 204 -DFFFNDFVHDVLIVWGDQDQIFPLK-MATELKELLGKKA-RLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 204 -~~~~~~~~~p~l~i~g~~D~~~~~~-~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
.....++..|+++++|+.|.+.+.. ....+.+.+ ++. +.++++++||+.+.|+|+++.+.+.+|+++.
T Consensus 250 ~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~v-p~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 250 APWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDV-PRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred ccccccccccceEEEEecCcccccchhHHHHHHHhh-ccccceEEecCCcccccccCHHHHHHHHHHHHHhh
Confidence 3344556669999999999999876 344444445 444 7888999999999999999999999999863
No 10
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=100.00 E-value=2.6e-32 Score=215.96 Aligned_cols=241 Identities=19% Similarity=0.298 Sum_probs=167.2
Q ss_pred CceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHH-HHHhhc----CCCeEEeecCCCCCCCCCCC
Q 024042 25 LSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRK-QVQFFA----PHFNVYVPDLIFFGHSTTRS 99 (273)
Q Consensus 25 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~-~~~~l~----~~~~v~~~d~~g~g~s~~~~ 99 (273)
....++.+ +|.+++|...+++. .+.+|+|||+||++++. ..|.. +.+.|. ++|+|+++|+||||.|+.+.
T Consensus 176 ~~~~~~~~-~~~~l~~~~~gp~~---~~~k~~VVLlHG~~~s~-~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~ 250 (481)
T PLN03087 176 FCTSWLSS-SNESLFVHVQQPKD---NKAKEDVLFIHGFISSS-AFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPA 250 (481)
T ss_pred eeeeeEee-CCeEEEEEEecCCC---CCCCCeEEEECCCCccH-HHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCC
Confidence 34555666 67899999987321 23468999999999998 88874 445554 46999999999999998653
Q ss_pred -ccccHHHHHHHHH-HHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchH---HHhhhhhh--
Q 024042 100 -IQRTELFQAASLG-KLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNE---ALVKRANL-- 172 (273)
Q Consensus 100 -~~~~~~~~~~~~~-~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~---~~~~~~~~-- 172 (273)
..++.+++++++. .+++.++.++++++||||||.+++.++.++|++++++|+++++......... ........
T Consensus 251 ~~~ytl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (481)
T PLN03087 251 DSLYTLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRR 330 (481)
T ss_pred CCcCCHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhcccc
Confidence 3478888899984 7899999999999999999999999999999999999999976543221110 00000000
Q ss_pred ---------------hhhhhcc---CCCChH---H---------HHHHhhhhh----------------ccCC---CCCh
Q 024042 173 ---------------ERIDHLM---LPESAS---Q---------LRTLTGLAV----------------SKNL---DIVP 203 (273)
Q Consensus 173 ---------------~~~~~~~---~~~~~~---~---------~~~~~~~~~----------------~~~~---~~~~ 203 (273)
....... ...... . ......... .... ....
T Consensus 331 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l 410 (481)
T PLN03087 331 VWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYL 410 (481)
T ss_pred cCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHH
Confidence 0000000 000000 0 000000000 0000 0000
Q ss_pred hhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCc-CChhhHHHHHHHHhcc
Q 024042 204 DFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQI-ENPGLFNSIVKNFLRG 271 (273)
Q Consensus 204 ~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~ 271 (273)
.....++..|+|+++|++|.++|++..+.+++.+ +++++++++++||+.+. ++|+++++.|.+|...
T Consensus 411 ~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~i-P~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 411 DHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKV-PRARVKVIDDKDHITIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred HHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhC-CCCEEEEeCCCCCcchhhcCHHHHHHHHHHHhhc
Confidence 1122357789999999999999999999999999 99999999999999885 9999999999999865
No 11
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=1.2e-32 Score=215.00 Aligned_cols=244 Identities=14% Similarity=0.124 Sum_probs=166.4
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCcc-cc
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQ-RT 103 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~-~~ 103 (273)
+...+..++|.+++|..++++ ....+++|||+||++++....|..++..|++. |+|+++|+||||.|...... .+
T Consensus 62 ~~~~~~~~~g~~l~~~~~~p~---~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~ 138 (349)
T PLN02385 62 EESYEVNSRGVEIFSKSWLPE---NSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPS 138 (349)
T ss_pred eeeeEEcCCCCEEEEEEEecC---CCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCC
Confidence 344555669999999888632 22457899999999887623468888888865 99999999999999865332 47
Q ss_pred HHHHHHHHHHHHHHhCC------ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcc--hH---HHhhhhhh
Q 024042 104 ELFQAASLGKLLEKIGV------ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGD--NE---ALVKRANL 172 (273)
Q Consensus 104 ~~~~~~~~~~~~~~~~~------~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~--~~---~~~~~~~~ 172 (273)
.+++++++.++++.+.. .+++|+||||||.+|+.++.++|++++++|+++|........ .. ........
T Consensus 139 ~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~~~~ 218 (349)
T PLN02385 139 FDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQILILLAN 218 (349)
T ss_pred HHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHHHHHHHH
Confidence 88889999988887743 379999999999999999999999999999999865432111 00 00000000
Q ss_pred --hh--------hhhccCCCC-hHHHHHHhhhhhccCCC-----------CChhhHHhhhhccEEEEecCCCCCCChHHH
Q 024042 173 --ER--------IDHLMLPES-ASQLRTLTGLAVSKNLD-----------IVPDFFFNDFVHDVLIVWGDQDQIFPLKMA 230 (273)
Q Consensus 173 --~~--------~~~~~~~~~-~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~ 230 (273)
.. ......... ...........+..... ......+.++..|+|+++|++|.++|.+.+
T Consensus 219 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~ 298 (349)
T PLN02385 219 LLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDPSVS 298 (349)
T ss_pred HCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccChHHH
Confidence 00 000000000 00000000000000000 000112345667999999999999999999
Q ss_pred HHHHHHhc-CCcEEEEeCCCCCCcCcCChhh----HHHHHHHHhccc
Q 024042 231 TELKELLG-KKARLEIIENTSHVPQIENPGL----FNSIVKNFLRGS 272 (273)
Q Consensus 231 ~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~----~~~~i~~fl~~~ 272 (273)
+.+.+.+. +++++++++++||.++.++|++ +.+.|.+||+++
T Consensus 299 ~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~ 345 (349)
T PLN02385 299 KFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSH 345 (349)
T ss_pred HHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHh
Confidence 99998873 5689999999999999888876 788899999875
No 12
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=1.4e-32 Score=205.82 Aligned_cols=214 Identities=16% Similarity=0.155 Sum_probs=152.9
Q ss_pred eEEEEcCCCCchhHhHHHHHHhhcC-CCeEEeecCCCCCCCCCCCc-cccHHHHHHHHHHHHHHhCC-ccEEEEEeccch
Q 024042 56 SLVLIHGFGPEAIWQWRKQVQFFAP-HFNVYVPDLIFFGHSTTRSI-QRTELFQAASLGKLLEKIGV-ERFSVVGTSYGG 132 (273)
Q Consensus 56 ~vi~~hG~~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~g~s~~~~~-~~~~~~~~~~~~~~~~~~~~-~~i~l~G~S~Gg 132 (273)
.|||+||++.+. ..|+.+++.|.+ +|+|+++|+||||.|..+.. .++.+++++++.++++.++. ++++++||||||
T Consensus 5 ~vvllHG~~~~~-~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG 83 (255)
T PLN02965 5 HFVFVHGASHGA-WCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGG 83 (255)
T ss_pred EEEEECCCCCCc-CcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcch
Confidence 599999999888 899999999954 59999999999999975543 56899999999999999987 599999999999
Q ss_pred HHHHHHHHhCCcccceEEEecCCCCCCCcc-hHHHhh-hhhhhhhhhc-----c-CCC-----ChHHHHH----------
Q 024042 133 FVAYHMARMWPERVEKVVIASSGVNMKRGD-NEALVK-RANLERIDHL-----M-LPE-----SASQLRT---------- 189 (273)
Q Consensus 133 ~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~-----~-~~~-----~~~~~~~---------- 189 (273)
.+++.++.++|++|+++|++++........ ...... .......... . .+. .......
T Consensus 84 ~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (255)
T PLN02965 84 GSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYNQSPLED 163 (255)
T ss_pred HHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHHhcCCCHHH
Confidence 999999999999999999999863211110 010100 0000000000 0 000 0000000
Q ss_pred --Hhhhhhcc-CCCC--Ch---hhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhH
Q 024042 190 --LTGLAVSK-NLDI--VP---DFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLF 261 (273)
Q Consensus 190 --~~~~~~~~-~~~~--~~---~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~ 261 (273)
........ .... .. ......+..|+++++|++|..+|++..+.+.+.+ +++++++++++||+++.|+|+++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~-~~a~~~~i~~~GH~~~~e~p~~v 242 (255)
T PLN02965 164 YTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENW-PPAQTYVLEDSDHSAFFSVPTTL 242 (255)
T ss_pred HHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhC-CcceEEEecCCCCchhhcCHHHH
Confidence 00000000 0000 00 0122346679999999999999999999999999 89999999999999999999999
Q ss_pred HHHHHHHhcc
Q 024042 262 NSIVKNFLRG 271 (273)
Q Consensus 262 ~~~i~~fl~~ 271 (273)
.+.|.+|+++
T Consensus 243 ~~~l~~~~~~ 252 (255)
T PLN02965 243 FQYLLQAVSS 252 (255)
T ss_pred HHHHHHHHHH
Confidence 9999999864
No 13
>PRK10349 carboxylesterase BioH; Provisional
Probab=100.00 E-value=9.5e-33 Score=207.23 Aligned_cols=220 Identities=21% Similarity=0.279 Sum_probs=152.4
Q ss_pred EEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHH
Q 024042 38 LHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEK 117 (273)
Q Consensus 38 l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~ 117 (273)
++|...| ++.|+|||+||++++. ..|..+.+.|.+.|+|+++|+||||.|.... .++.++.++++. +
T Consensus 4 ~~y~~~G-------~g~~~ivllHG~~~~~-~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~-~~~~~~~~~~l~----~ 70 (256)
T PRK10349 4 IWWQTKG-------QGNVHLVLLHGWGLNA-EVWRCIDEELSSHFTLHLVDLPGFGRSRGFG-ALSLADMAEAVL----Q 70 (256)
T ss_pred cchhhcC-------CCCCeEEEECCCCCCh-hHHHHHHHHHhcCCEEEEecCCCCCCCCCCC-CCCHHHHHHHHH----h
Confidence 5566654 2345799999999999 9999999999888999999999999998543 456666665544 3
Q ss_pred hCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCc-----chHHHhhhh----h---hhhhhhc-----cC
Q 024042 118 IGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRG-----DNEALVKRA----N---LERIDHL-----ML 180 (273)
Q Consensus 118 ~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~-----~~~~~~~~~----~---~~~~~~~-----~~ 180 (273)
+..++++++||||||.+|+.+|.++|++++++|++++....... ......... . ....... ..
T Consensus 71 ~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (256)
T PRK10349 71 QAPDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMG 150 (256)
T ss_pred cCCCCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHcc
Confidence 56689999999999999999999999999999999875432111 000000000 0 0000000 00
Q ss_pred CCC-hHHHHHHhhhhhccC--------------CCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEE
Q 024042 181 PES-ASQLRTLTGLAVSKN--------------LDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEI 245 (273)
Q Consensus 181 ~~~-~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 245 (273)
... ............... ........+.++..|+|+++|++|.++|.+..+.+.+.+ +++++++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i-~~~~~~~ 229 (256)
T PRK10349 151 TETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLW-PHSESYI 229 (256)
T ss_pred CchHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhC-CCCeEEE
Confidence 000 000110000000000 001112345566779999999999999999999999999 9999999
Q ss_pred eCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 246 IENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 246 ~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
++++||+++.|+|+++.+.+.+|-++
T Consensus 230 i~~~gH~~~~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 230 FAKAAHAPFISHPAEFCHLLVALKQR 255 (256)
T ss_pred eCCCCCCccccCHHHHHHHHHHHhcc
Confidence 99999999999999999999998654
No 14
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=100.00 E-value=7.4e-33 Score=208.21 Aligned_cols=227 Identities=22% Similarity=0.340 Sum_probs=163.4
Q ss_pred EEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCC-ccccHHHHHHHHHHHHH
Q 024042 38 LHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRS-IQRTELFQAASLGKLLE 116 (273)
Q Consensus 38 l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~-~~~~~~~~~~~~~~~~~ 116 (273)
++|..++ .+..+.|+||++||++++. ..|...++.|.++|+|+++|+||+|.|.... ..++.++.++++.++++
T Consensus 1 ~~~~~~~----~~~~~~~~iv~lhG~~~~~-~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~ 75 (257)
T TIGR03611 1 MHYELHG----PPDADAPVVVLSSGLGGSG-SYWAPQLDVLTQRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLD 75 (257)
T ss_pred CEEEEec----CCCCCCCEEEEEcCCCcch-hHHHHHHHHHHhccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHH
Confidence 3566665 3335678999999999998 8999999999888999999999999998643 34688999999999999
Q ss_pred HhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhh------hhhhhhh----hccCC-----
Q 024042 117 KIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKR------ANLERID----HLMLP----- 181 (273)
Q Consensus 117 ~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~------~~~~~~~----~~~~~----- 181 (273)
.++.++++++|||+||.+|+.++.++|++++++|++++............... ....... ....+
T Consensus 76 ~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (257)
T TIGR03611 76 ALNIERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWIS 155 (257)
T ss_pred HhCCCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHhh
Confidence 99999999999999999999999999999999999987554322111000000 0000000 00000
Q ss_pred CChHHHH-H-------------HhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeC
Q 024042 182 ESASQLR-T-------------LTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIE 247 (273)
Q Consensus 182 ~~~~~~~-~-------------~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (273)
....... . ..... .............++..|+++++|++|.++|.+.++.+.+.+ ++.+++.++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~ 233 (257)
T TIGR03611 156 ENAARLAADEAHALAHFPGKANVLRRI-NALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAAL-PNAQLKLLP 233 (257)
T ss_pred ccchhhhhhhhhcccccCccHHHHHHH-HHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhc-CCceEEEEC
Confidence 0000000 0 00000 000000112234456679999999999999999999999998 889999999
Q ss_pred CCCCCcCcCChhhHHHHHHHHhcc
Q 024042 248 NTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 248 ~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
++||+.+.++|+++.+.|.+||++
T Consensus 234 ~~gH~~~~~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 234 YGGHASNVTDPETFNRALLDFLKT 257 (257)
T ss_pred CCCCCccccCHHHHHHHHHHHhcC
Confidence 999999999999999999999964
No 15
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=100.00 E-value=4.2e-32 Score=206.78 Aligned_cols=227 Identities=22% Similarity=0.351 Sum_probs=155.8
Q ss_pred cceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHH---HHhhc-CCCeEEeecCCCCCCCCCCCccc-cHHHHHH
Q 024042 35 ETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQ---VQFFA-PHFNVYVPDLIFFGHSTTRSIQR-TELFQAA 109 (273)
Q Consensus 35 g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~---~~~l~-~~~~v~~~d~~g~g~s~~~~~~~-~~~~~~~ 109 (273)
|.+++|...+ +.|+|||+||++.+. ..|... +..+. ++|+|+++|+||||.|+...... .....++
T Consensus 19 ~~~~~y~~~g--------~~~~ivllHG~~~~~-~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 89 (282)
T TIGR03343 19 NFRIHYNEAG--------NGEAVIMLHGGGPGA-GGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNAR 89 (282)
T ss_pred ceeEEEEecC--------CCCeEEEECCCCCch-hhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHH
Confidence 4568888764 457899999998877 566532 33444 45999999999999998653221 2224688
Q ss_pred HHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCc---ch----HHHhhhhh---hhhhhhc-
Q 024042 110 SLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRG---DN----EALVKRAN---LERIDHL- 178 (273)
Q Consensus 110 ~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~---~~----~~~~~~~~---~~~~~~~- 178 (273)
++.++++.++.++++++||||||.+++.++.++|++++++|++++....... .. ........ .......
T Consensus 90 ~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (282)
T TIGR03343 90 AVKGLMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQML 169 (282)
T ss_pred HHHHHHHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHH
Confidence 8999999999999999999999999999999999999999999875321110 00 00000000 0000000
Q ss_pred ----cCC-C-ChHHH--------------HHHhhhhh-ccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh
Q 024042 179 ----MLP-E-SASQL--------------RTLTGLAV-SKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL 237 (273)
Q Consensus 179 ----~~~-~-~~~~~--------------~~~~~~~~-~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~ 237 (273)
..+ . ..... ........ .....+.....+.++.+|+|+++|++|.+++.+.++.+++.+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~ 249 (282)
T TIGR03343 170 NVFLFDQSLITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNM 249 (282)
T ss_pred hhCccCcccCcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhC
Confidence 000 0 00000 00000000 000111223346677889999999999999999999999999
Q ss_pred cCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 238 GKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 238 ~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
+++++++++++||+.+.|+|+++.+.|.+||+.
T Consensus 250 -~~~~~~~i~~agH~~~~e~p~~~~~~i~~fl~~ 282 (282)
T TIGR03343 250 -PDAQLHVFSRCGHWAQWEHADAFNRLVIDFLRN 282 (282)
T ss_pred -CCCEEEEeCCCCcCCcccCHHHHHHHHHHHhhC
Confidence 899999999999999999999999999999963
No 16
>PHA02857 monoglyceride lipase; Provisional
Probab=100.00 E-value=1.1e-31 Score=203.61 Aligned_cols=238 Identities=13% Similarity=0.082 Sum_probs=160.1
Q ss_pred EecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCc-cccHHHH
Q 024042 30 IDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSI-QRTELFQ 107 (273)
Q Consensus 30 ~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~-~~~~~~~ 107 (273)
+..+||.+++|..+.| ....++.|+++||++++. ..|..+++.|.+. |+|+++|+||||.|..... ..+....
T Consensus 5 ~~~~~g~~l~~~~~~~----~~~~~~~v~llHG~~~~~-~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~ 79 (276)
T PHA02857 5 MFNLDNDYIYCKYWKP----ITYPKALVFISHGAGEHS-GRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVY 79 (276)
T ss_pred eecCCCCEEEEEeccC----CCCCCEEEEEeCCCcccc-chHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHH
Confidence 4445999999988752 234556777789999988 9999999999876 9999999999999975432 1345555
Q ss_pred HHHHHHHHHHh----CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhh-hhcc---
Q 024042 108 AASLGKLLEKI----GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERI-DHLM--- 179 (273)
Q Consensus 108 ~~~~~~~~~~~----~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--- 179 (273)
++++.+.++.+ ..++++++|||+||.+|+.++.++|++++++|+++|..................... ....
T Consensus 80 ~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (276)
T PHA02857 80 VRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIFYPNKIVGK 159 (276)
T ss_pred HHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHHHHHHHhCCCCccCC
Confidence 66666666544 336899999999999999999999999999999998655321111110000000000 0000
Q ss_pred -----CCCChHHHHHHhhhhhccCCCC-------------ChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCc
Q 024042 180 -----LPESASQLRTLTGLAVSKNLDI-------------VPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKA 241 (273)
Q Consensus 180 -----~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~ 241 (273)
...................... .....+.++..|+|+++|++|.++|++.++.+.+.+.++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~ 239 (276)
T PHA02857 160 LCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNR 239 (276)
T ss_pred CCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCc
Confidence 0000000000000000000000 0012234566799999999999999999999998874578
Q ss_pred EEEEeCCCCCCcCcCCh---hhHHHHHHHHhccc
Q 024042 242 RLEIIENTSHVPQIENP---GLFNSIVKNFLRGS 272 (273)
Q Consensus 242 ~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~~~ 272 (273)
++.+++++||.++.|++ +++.+.+.+||+++
T Consensus 240 ~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 240 EIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred eEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 99999999999998865 57889999999764
No 17
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=100.00 E-value=2.6e-32 Score=204.38 Aligned_cols=226 Identities=24% Similarity=0.350 Sum_probs=163.1
Q ss_pred EEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHH
Q 024042 38 LHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEK 117 (273)
Q Consensus 38 l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~ 117 (273)
++|...+ .++++|+||++||++.+. ..|..+++.|.++|+|+++|+||+|.|..+...++.++.++++.++++.
T Consensus 2 ~~~~~~g-----~~~~~~~li~~hg~~~~~-~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~ 75 (251)
T TIGR02427 2 LHYRLDG-----AADGAPVLVFINSLGTDL-RMWDPVLPALTPDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDH 75 (251)
T ss_pred ceEEeec-----CCCCCCeEEEEcCcccch-hhHHHHHHHhhcccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 5666654 123678999999999998 8999999999888999999999999998766667899999999999999
Q ss_pred hCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcc-hHHHhhhh---hh---------hhhhhccCCCCh
Q 024042 118 IGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGD-NEALVKRA---NL---------ERIDHLMLPESA 184 (273)
Q Consensus 118 ~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~-~~~~~~~~---~~---------~~~~~~~~~~~~ 184 (273)
++.++++++|||+||.+++.+|.++|+++++++++++........ ........ .. ..+.........
T Consensus 76 ~~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (251)
T TIGR02427 76 LGIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAHP 155 (251)
T ss_pred hCCCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccCCh
Confidence 998999999999999999999999999999999998764432211 00000000 00 000000000011
Q ss_pred HHHHHHhhhhh-----------ccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCc
Q 024042 185 SQLRTLTGLAV-----------SKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVP 253 (273)
Q Consensus 185 ~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 253 (273)
........... .............++..|+++++|++|.++|.+..+.+.+.+ ++.+++.++++||+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~ 234 (251)
T TIGR02427 156 ARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLV-PGARFAEIRGAGHIP 234 (251)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhC-CCceEEEECCCCCcc
Confidence 11100000000 000011112234556679999999999999999999999988 889999999999999
Q ss_pred CcCChhhHHHHHHHHhc
Q 024042 254 QIENPGLFNSIVKNFLR 270 (273)
Q Consensus 254 ~~~~~~~~~~~i~~fl~ 270 (273)
+.++|+++.+.+.+|++
T Consensus 235 ~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 235 CVEQPEAFNAALRDFLR 251 (251)
T ss_pred cccChHHHHHHHHHHhC
Confidence 99999999999999984
No 18
>PRK10673 acyl-CoA esterase; Provisional
Probab=100.00 E-value=7.4e-32 Score=202.53 Aligned_cols=230 Identities=14% Similarity=0.166 Sum_probs=162.4
Q ss_pred eEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHH
Q 024042 37 TLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLE 116 (273)
Q Consensus 37 ~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~ 116 (273)
+++|..+++ ....++|+|||+||++++. ..|..+...|.++|+|+++|+||||.|... ..++.++.++++.++++
T Consensus 2 ~~~~~~~~~---~~~~~~~~iv~lhG~~~~~-~~~~~~~~~l~~~~~vi~~D~~G~G~s~~~-~~~~~~~~~~d~~~~l~ 76 (255)
T PRK10673 2 KLNIRAQTA---QNPHNNSPIVLVHGLFGSL-DNLGVLARDLVNDHDIIQVDMRNHGLSPRD-PVMNYPAMAQDLLDTLD 76 (255)
T ss_pred cceeeeccC---CCCCCCCCEEEECCCCCch-hHHHHHHHHHhhCCeEEEECCCCCCCCCCC-CCCCHHHHHHHHHHHHH
Confidence 345555432 2345678999999999998 899999999988899999999999999864 34788999999999999
Q ss_pred HhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcc-hHHHhhhhhhh-h--------hhhccC-CCChH
Q 024042 117 KIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGD-NEALVKRANLE-R--------IDHLML-PESAS 185 (273)
Q Consensus 117 ~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~-~~~~~~~~~~~-~--------~~~~~~-~~~~~ 185 (273)
.++.++++++||||||.+|+.++.++|++|+++|++++........ ........... . ...... .....
T Consensus 77 ~l~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (255)
T PRK10673 77 ALQIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLNEE 156 (255)
T ss_pred HcCCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcCCH
Confidence 9998999999999999999999999999999999997543221110 00000000000 0 000000 00000
Q ss_pred HHHHHhhhhhccC-CCCC------------hhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCC
Q 024042 186 QLRTLTGLAVSKN-LDIV------------PDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHV 252 (273)
Q Consensus 186 ~~~~~~~~~~~~~-~~~~------------~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 252 (273)
.........+... .... .......+..|+|+++|++|..++.+..+.+.+.+ ++.++.+++++||+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~ 235 (255)
T PRK10673 157 GVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQF-PQARAHVIAGAGHW 235 (255)
T ss_pred HHHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhC-CCcEEEEeCCCCCe
Confidence 0000000000000 0000 00112344569999999999999999999999998 89999999999999
Q ss_pred cCcCChhhHHHHHHHHhccc
Q 024042 253 PQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 253 ~~~~~~~~~~~~i~~fl~~~ 272 (273)
.+.++|+++.+.+.+||+++
T Consensus 236 ~~~~~p~~~~~~l~~fl~~~ 255 (255)
T PRK10673 236 VHAEKPDAVLRAIRRYLNDK 255 (255)
T ss_pred eeccCHHHHHHHHHHHHhcC
Confidence 99999999999999999864
No 19
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=100.00 E-value=1.1e-31 Score=208.59 Aligned_cols=231 Identities=16% Similarity=0.246 Sum_probs=166.9
Q ss_pred cCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCc----cccHHHH
Q 024042 32 IDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSI----QRTELFQ 107 (273)
Q Consensus 32 ~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~----~~~~~~~ 107 (273)
..+|.+++|...| +.++|+|||+||++.+. ..|+.+++.|+++|+|+++|+||||.|+.+.. .++.+++
T Consensus 111 ~~~~~~~~y~~~G------~~~~~~ivllHG~~~~~-~~w~~~~~~L~~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~ 183 (383)
T PLN03084 111 SSDLFRWFCVESG------SNNNPPVLLIHGFPSQA-YSYRKVLPVLSKNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEY 183 (383)
T ss_pred cCCceEEEEEecC------CCCCCeEEEECCCCCCH-HHHHHHHHHHhcCCEEEEECCCCCCCCCCCcccccccCCHHHH
Confidence 4589999999886 44578999999999998 99999999998889999999999999987643 4789999
Q ss_pred HHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCc-chHHHhhh--h------h---hhhh
Q 024042 108 AASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRG-DNEALVKR--A------N---LERI 175 (273)
Q Consensus 108 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~-~~~~~~~~--~------~---~~~~ 175 (273)
++++.+++++++.++++|+|||+||.+++.++.++|++++++|+++++...... ........ . . ....
T Consensus 184 a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~~~~~~~~~~ 263 (383)
T PLN03084 184 VSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEIFSQDPLRAS 263 (383)
T ss_pred HHHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHHhhhhhhcchHHHH
Confidence 999999999999999999999999999999999999999999999987542210 01000000 0 0 0000
Q ss_pred hhccC---C--CChHHHHHHh-------------h---hhhccCCCCChhhHH-----hhhhccEEEEecCCCCCCChHH
Q 024042 176 DHLML---P--ESASQLRTLT-------------G---LAVSKNLDIVPDFFF-----NDFVHDVLIVWGDQDQIFPLKM 229 (273)
Q Consensus 176 ~~~~~---~--~~~~~~~~~~-------------~---~~~~~~~~~~~~~~~-----~~~~~p~l~i~g~~D~~~~~~~ 229 (273)
...+. + .......... . ............... .++..|+++++|+.|.+++.+.
T Consensus 264 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~ 343 (383)
T PLN03084 264 DKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDG 343 (383)
T ss_pred hhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHH
Confidence 00000 0 0000000000 0 000000000000011 2356799999999999999998
Q ss_pred HHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 230 ATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
.+.+.+. .+.++++++++||+++.|+|+++++.|.+||++
T Consensus 344 ~~~~a~~--~~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 344 VEDFCKS--SQHKLIELPMAGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred HHHHHHh--cCCeEEEECCCCCCcchhCHHHHHHHHHHHhhC
Confidence 8888776 378999999999999999999999999999864
No 20
>PRK06489 hypothetical protein; Provisional
Probab=100.00 E-value=9.5e-32 Score=210.48 Aligned_cols=230 Identities=18% Similarity=0.233 Sum_probs=156.8
Q ss_pred CcceEEeecCCccCCCCCCC-------CCeEEEEcCCCCchhHhHH--HHHHhh--------cCCCeEEeecCCCCCCCC
Q 024042 34 DETTLHFWGPKLEDDHKTLK-------KPSLVLIHGFGPEAIWQWR--KQVQFF--------APHFNVYVPDLIFFGHST 96 (273)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~-------~~~vi~~hG~~~~~~~~~~--~~~~~l--------~~~~~v~~~d~~g~g~s~ 96 (273)
+|.+++|...| .++ +|+|||+||++++. ..|. .+.+.| +++|+|+++|+||||.|+
T Consensus 48 ~g~~i~y~~~G------~~~~~~~~~~gpplvllHG~~~~~-~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~ 120 (360)
T PRK06489 48 PELRLHYTTLG------TPHRNADGEIDNAVLVLHGTGGSG-KSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSS 120 (360)
T ss_pred CCceEEEEecC------CCCcccccCCCCeEEEeCCCCCch-hhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCC
Confidence 67888999887 222 68999999999887 6664 444443 566999999999999998
Q ss_pred CCCc-------cccHHHHHHHHHHHH-HHhCCccEE-EEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchH---
Q 024042 97 TRSI-------QRTELFQAASLGKLL-EKIGVERFS-VVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNE--- 164 (273)
Q Consensus 97 ~~~~-------~~~~~~~~~~~~~~~-~~~~~~~i~-l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~--- 164 (273)
.+.. .++.++.++++.+++ ++++.++++ ++||||||.+|+.++.++|++++++|++++..........
T Consensus 121 ~p~~~~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~ 200 (360)
T PRK06489 121 KPSDGLRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWR 200 (360)
T ss_pred CCCcCCCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHH
Confidence 6543 367888888887754 888988885 8999999999999999999999999999875321110000
Q ss_pred HH-hhhhhhh-------------h------hhh----------ccCCCChH----HHHHHhhhh-----------hccCC
Q 024042 165 AL-VKRANLE-------------R------IDH----------LMLPESAS----QLRTLTGLA-----------VSKNL 199 (273)
Q Consensus 165 ~~-~~~~~~~-------------~------~~~----------~~~~~~~~----~~~~~~~~~-----------~~~~~ 199 (273)
.. ....... . ... ........ ......... .....
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (360)
T PRK06489 201 RMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFLYQWDSSR 280 (360)
T ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHHHHHHHhh
Confidence 00 0000000 0 000 00000000 000000000 00000
Q ss_pred CCChhhHHhhhhccEEEEecCCCCCCChHHH--HHHHHHhcCCcEEEEeCCC----CCCcCcCChhhHHHHHHHHhccc
Q 024042 200 DIVPDFFFNDFVHDVLIVWGDQDQIFPLKMA--TELKELLGKKARLEIIENT----SHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 200 ~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~--~~~~~~~~~~~~~~~~~~~----gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
.......+.++.+|+|+|+|++|.++|.+.. +.+.+.+ ++.++++++++ ||.++ ++|+++.+.|.+||++.
T Consensus 281 ~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~i-p~a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~~~ 357 (360)
T PRK06489 281 DYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRV-KHGRLVLIPASPETRGHGTT-GSAKFWKAYLAEFLAQV 357 (360)
T ss_pred ccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhC-cCCeEEEECCCCCCCCcccc-cCHHHHHHHHHHHHHhc
Confidence 1122334567778999999999999998865 7888888 99999999986 99987 89999999999999753
No 21
>PRK10749 lysophospholipase L2; Provisional
Probab=100.00 E-value=6.3e-31 Score=203.48 Aligned_cols=238 Identities=11% Similarity=0.060 Sum_probs=162.5
Q ss_pred EEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCc------c
Q 024042 29 TIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSI------Q 101 (273)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~------~ 101 (273)
.+...+|.+++|..+++ ..++++||++||++.+. ..|..++..+.+. |+|+++|+||||.|..... .
T Consensus 34 ~~~~~~g~~l~~~~~~~-----~~~~~~vll~HG~~~~~-~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~ 107 (330)
T PRK10749 34 EFTGVDDIPIRFVRFRA-----PHHDRVVVICPGRIESY-VKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHV 107 (330)
T ss_pred EEEcCCCCEEEEEEccC-----CCCCcEEEEECCccchH-HHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCcc
Confidence 34444999999999862 24567999999999887 7888888777655 9999999999999975422 1
Q ss_pred ccHHHHHHHHHHHHHHh----CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHH----hhhhh-h
Q 024042 102 RTELFQAASLGKLLEKI----GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEAL----VKRAN-L 172 (273)
Q Consensus 102 ~~~~~~~~~~~~~~~~~----~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~----~~~~~-~ 172 (273)
.+.+++++++..+++.+ +..+++++||||||.+++.++.++|++++++|+++|............ ..... .
T Consensus 108 ~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~ 187 (330)
T PRK10749 108 ERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRILNWAEGH 187 (330)
T ss_pred ccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHHHHHHHHh
Confidence 47888999999999876 557999999999999999999999999999999998754321111110 00000 0
Q ss_pred hhh--------hhcc--------CCCChHHHHHHhhhhhccCCC----CC----h---------hhHHhhhhccEEEEec
Q 024042 173 ERI--------DHLM--------LPESASQLRTLTGLAVSKNLD----IV----P---------DFFFNDFVHDVLIVWG 219 (273)
Q Consensus 173 ~~~--------~~~~--------~~~~~~~~~~~~~~~~~~~~~----~~----~---------~~~~~~~~~p~l~i~g 219 (273)
... .... ..................... .. . .....++..|+|+++|
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G 267 (330)
T PRK10749 188 PRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLLLLQA 267 (330)
T ss_pred cCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEEEEEe
Confidence 000 0000 001111111111111101000 00 0 0112345569999999
Q ss_pred CCCCCCChHHHHHHHHHhc------CCcEEEEeCCCCCCcCcCCh---hhHHHHHHHHhccc
Q 024042 220 DQDQIFPLKMATELKELLG------KKARLEIIENTSHVPQIENP---GLFNSIVKNFLRGS 272 (273)
Q Consensus 220 ~~D~~~~~~~~~~~~~~~~------~~~~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~~~ 272 (273)
++|.+++++.++.+++.+. +++++++++++||.++.|.+ +.+.+.|.+||+++
T Consensus 268 ~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 268 EEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred CCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 9999999999998888761 35689999999999988765 57888999999864
No 22
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=2.1e-31 Score=206.86 Aligned_cols=245 Identities=13% Similarity=0.167 Sum_probs=164.5
Q ss_pred CceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCc-cc
Q 024042 25 LSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSI-QR 102 (273)
Q Consensus 25 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~-~~ 102 (273)
.+...++..||.+++|+.+.+.. ..+.+++|||+||++.+....|..+...|.+. |+|+++|+||||.|..... ..
T Consensus 32 ~~~~~~~~~dg~~l~~~~~~~~~--~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~ 109 (330)
T PLN02298 32 GSKSFFTSPRGLSLFTRSWLPSS--SSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVP 109 (330)
T ss_pred cccceEEcCCCCEEEEEEEecCC--CCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCC
Confidence 34567777899999998775211 12356789999999866424567777778765 9999999999999975433 24
Q ss_pred cHHHHHHHHHHHHHHhCC------ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcc--h---HHHhhhhh
Q 024042 103 TELFQAASLGKLLEKIGV------ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGD--N---EALVKRAN 171 (273)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~------~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~--~---~~~~~~~~ 171 (273)
+.+.+++|+.++++.+.. .+++|+||||||.+|+.++.++|++++++|+++|........ . ........
T Consensus 110 ~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (330)
T PLN02298 110 NVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPIPQILTFVA 189 (330)
T ss_pred CHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHHHHHHHHHH
Confidence 777889999999987742 479999999999999999999999999999999875433211 0 00000000
Q ss_pred hhhhhhcc-------CCCC--hHHHHHHhh---hhhccCCC-----------CChhhHHhhhhccEEEEecCCCCCCChH
Q 024042 172 LERIDHLM-------LPES--ASQLRTLTG---LAVSKNLD-----------IVPDFFFNDFVHDVLIVWGDQDQIFPLK 228 (273)
Q Consensus 172 ~~~~~~~~-------~~~~--~~~~~~~~~---~~~~~~~~-----------~~~~~~~~~~~~p~l~i~g~~D~~~~~~ 228 (273)
....... .... ......... ..+..... ......+.++..|+|+++|++|.++|++
T Consensus 190 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~ivp~~ 268 (330)
T PLN02298 190 -RFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLHGSADVVTDPD 268 (330)
T ss_pred -HHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEecCCCCCCCHH
Confidence 0000000 0000 000000000 00000000 0011223456679999999999999999
Q ss_pred HHHHHHHHhc-CCcEEEEeCCCCCCcCcCChh----hHHHHHHHHhccc
Q 024042 229 MATELKELLG-KKARLEIIENTSHVPQIENPG----LFNSIVKNFLRGS 272 (273)
Q Consensus 229 ~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~----~~~~~i~~fl~~~ 272 (273)
.++.+++.+. ++++++++++++|..+.++|+ .+.+.+.+||++.
T Consensus 269 ~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~ 317 (330)
T PLN02298 269 VSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNER 317 (330)
T ss_pred HHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHh
Confidence 9999988873 578999999999999988775 4677888898765
No 23
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=100.00 E-value=1.2e-30 Score=191.20 Aligned_cols=244 Identities=24% Similarity=0.316 Sum_probs=168.3
Q ss_pred CCCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCcc-
Q 024042 23 AGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQ- 101 (273)
Q Consensus 23 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~- 101 (273)
.....+.+.++++..+...... .....++++|++||+|.+. ..|-.-.+.|++.+.|+++|++|+|.|+++.-.
T Consensus 63 v~~~~~~v~i~~~~~iw~~~~~----~~~~~~~plVliHGyGAg~-g~f~~Nf~~La~~~~vyaiDllG~G~SSRP~F~~ 137 (365)
T KOG4409|consen 63 VPYSKKYVRIPNGIEIWTITVS----NESANKTPLVLIHGYGAGL-GLFFRNFDDLAKIRNVYAIDLLGFGRSSRPKFSI 137 (365)
T ss_pred CCcceeeeecCCCceeEEEeec----ccccCCCcEEEEeccchhH-HHHHHhhhhhhhcCceEEecccCCCCCCCCCCCC
Confidence 3456778888777776666554 3346788999999999998 889888999999999999999999999987543
Q ss_pred ---ccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCc-c-------hHHHhhh-
Q 024042 102 ---RTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRG-D-------NEALVKR- 169 (273)
Q Consensus 102 ---~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~-~-------~~~~~~~- 169 (273)
.....+++.+.++....++++.+|+|||+||++|..+|.+||++|+.+|+++|+...... . .......
T Consensus 138 d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~ 217 (365)
T KOG4409|consen 138 DPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKAL 217 (365)
T ss_pred CcccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhh
Confidence 355678899999999999999999999999999999999999999999999998765532 1 0001100
Q ss_pred ------hhhhhhhhccCCCChHHHHHHhhhhhccCC---------------------------------CCChhhH---H
Q 024042 170 ------ANLERIDHLMLPESASQLRTLTGLAVSKNL---------------------------------DIVPDFF---F 207 (273)
Q Consensus 170 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------~~~~~~~---~ 207 (273)
.+.....+.+.+..+.....+....+.... .+..... +
T Consensus 218 ~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~ 297 (365)
T KOG4409|consen 218 FLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRL 297 (365)
T ss_pred hhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHH
Confidence 000001111111111111111111110000 0111111 1
Q ss_pred hhhh--ccEEEEecCCCCCCChHHHHHHHHHh-cCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 208 NDFV--HDVLIVWGDQDQIFPLKMATELKELL-GKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 208 ~~~~--~p~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
..+. +|+++|+|++|=+ ......++.+.+ ...++.+++|++||....++|+.+.+.+.+++++.
T Consensus 298 ~~l~~~~pv~fiyG~~dWm-D~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 298 RELKKDVPVTFIYGDRDWM-DKNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred HhhccCCCEEEEecCcccc-cchhHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhcc
Confidence 1222 3999999999854 445555555543 36699999999999999999999999999998753
No 24
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.98 E-value=4.8e-30 Score=191.18 Aligned_cols=208 Identities=18% Similarity=0.219 Sum_probs=144.0
Q ss_pred CCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEeccchH
Q 024042 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGF 133 (273)
Q Consensus 54 ~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~ 133 (273)
+|+|||+||++++. ..|..+.+.|+ +|+|+++|+||||.|..+.. .+.+++++++.+++++++.++++++||||||.
T Consensus 2 ~p~vvllHG~~~~~-~~w~~~~~~l~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~ 78 (242)
T PRK11126 2 LPWLVFLHGLLGSG-QDWQPVGEALP-DYPRLYIDLPGHGGSAAISV-DGFADVSRLLSQTLQSYNILPYWLVGYSLGGR 78 (242)
T ss_pred CCEEEEECCCCCCh-HHHHHHHHHcC-CCCEEEecCCCCCCCCCccc-cCHHHHHHHHHHHHHHcCCCCeEEEEECHHHH
Confidence 57899999999999 99999999884 69999999999999986543 48889999999999999999999999999999
Q ss_pred HHHHHHHhCCcc-cceEEEecCCCCCCCcchH--HHh------hhhh----hhhhhhc-----cCCCChHHHHHHhhh--
Q 024042 134 VAYHMARMWPER-VEKVVIASSGVNMKRGDNE--ALV------KRAN----LERIDHL-----MLPESASQLRTLTGL-- 193 (273)
Q Consensus 134 ~a~~~a~~~~~~-v~~~v~~~~~~~~~~~~~~--~~~------~~~~----~~~~~~~-----~~~~~~~~~~~~~~~-- 193 (273)
+|+.++.++|+. +++++++++.......... ... .... ....... ...............
T Consensus 79 va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (242)
T PRK11126 79 IAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFASLNAEQRQQLVAKRS 158 (242)
T ss_pred HHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhhccCccHHHHHHHhcc
Confidence 999999998654 9999998876533221100 000 0000 0000000 000000000000000
Q ss_pred ---------hhc-c--CCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhH
Q 024042 194 ---------AVS-K--NLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLF 261 (273)
Q Consensus 194 ---------~~~-~--~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~ 261 (273)
... . .........+.++.+|+++++|++|..+. .+.+. .+++++.++++||+++.++|+++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~--~~~~~~~i~~~gH~~~~e~p~~~ 231 (242)
T PRK11126 159 NNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQ--LALPLHVIPNAGHNAHRENPAAF 231 (242)
T ss_pred cCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHH--hcCeEEEeCCCCCchhhhChHHH
Confidence 000 0 00001123455677899999999998542 23332 37899999999999999999999
Q ss_pred HHHHHHHhcc
Q 024042 262 NSIVKNFLRG 271 (273)
Q Consensus 262 ~~~i~~fl~~ 271 (273)
.+.|.+|+++
T Consensus 232 ~~~i~~fl~~ 241 (242)
T PRK11126 232 AASLAQILRL 241 (242)
T ss_pred HHHHHHHHhh
Confidence 9999999975
No 25
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.98 E-value=2.9e-30 Score=196.51 Aligned_cols=249 Identities=27% Similarity=0.370 Sum_probs=175.7
Q ss_pred hCCCceeEEecCCcc-eEEeecCCcc---CCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC--CeEEeecCCCCCC-
Q 024042 22 SAGLSSQTIDIDDET-TLHFWGPKLE---DDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH--FNVYVPDLIFFGH- 94 (273)
Q Consensus 22 ~~~~~~~~~~~~~g~-~l~~~~~~~~---~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~g~g~- 94 (273)
..++....++++.|. ++....++.. ..+.+..+++||++|||+++. ..|+.....|.+. +.|+++|++|+|.
T Consensus 22 ~~~~~~~~i~~~~g~~~~~~~w~~~~~~~~~~~~~~~~pvlllHGF~~~~-~~w~~~~~~L~~~~~~~v~aiDl~G~g~~ 100 (326)
T KOG1454|consen 22 FVTLRSTSIEIPWGPLTIRSKWIPNLDKYGSPGDKDKPPVLLLHGFGASS-FSWRRVVPLLSKAKGLRVLAIDLPGHGYS 100 (326)
T ss_pred eccccceEEEcccCCceeEEEEeccceeccCCCCCCCCcEEEeccccCCc-ccHhhhccccccccceEEEEEecCCCCcC
Confidence 345677788887773 4444444322 011125789999999999988 9999999999988 8999999999994
Q ss_pred CCCCCc-cccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEE---EecCCCCCCCcchHHHhhhh
Q 024042 95 STTRSI-QRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVV---IASSGVNMKRGDNEALVKRA 170 (273)
Q Consensus 95 s~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v---~~~~~~~~~~~~~~~~~~~~ 170 (273)
|..+.. .++..+.++.+..+......++++++|||+||.+|..+|+.+|+.|++++ ++++................
T Consensus 101 s~~~~~~~y~~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~ 180 (326)
T KOG1454|consen 101 SPLPRGPLYTLRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLL 180 (326)
T ss_pred CCCCCCCceehhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhh
Confidence 443333 37888999999999999988899999999999999999999999999999 66665554433211111111
Q ss_pred h----hhhhhhc-c--CC-----------------C---ChHHHHHHhh------------hhhccC-C--CCChhhHHh
Q 024042 171 N----LERIDHL-M--LP-----------------E---SASQLRTLTG------------LAVSKN-L--DIVPDFFFN 208 (273)
Q Consensus 171 ~----~~~~~~~-~--~~-----------------~---~~~~~~~~~~------------~~~~~~-~--~~~~~~~~~ 208 (273)
. ....... . .+ . .......... ..+... . +........
T Consensus 181 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (326)
T KOG1454|consen 181 DKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIK 260 (326)
T ss_pred hhhccHhhhcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhc
Confidence 1 0000000 0 00 0 0000000000 000000 0 123333455
Q ss_pred hhh-ccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 209 DFV-HDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 209 ~~~-~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
++. +|+|+++|++|.++|.+.++.+.+.+ +++++++++++||.++.+.|+++++.|..|+++.
T Consensus 261 ~i~~~pvlii~G~~D~~~p~~~~~~~~~~~-pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 261 KIWKCPVLIIWGDKDQIVPLELAEELKKKL-PNAELVEIPGAGHLPHLERPEEVAALLRSFIARL 324 (326)
T ss_pred cccCCceEEEEcCcCCccCHHHHHHHHhhC-CCceEEEeCCCCcccccCCHHHHHHHHHHHHHHh
Confidence 565 79999999999999999999999999 9999999999999999999999999999999864
No 26
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.97 E-value=3.2e-30 Score=192.42 Aligned_cols=209 Identities=22% Similarity=0.292 Sum_probs=145.9
Q ss_pred CCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEeccchH
Q 024042 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGF 133 (273)
Q Consensus 54 ~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~ 133 (273)
+|+|||+||++++. ..|..+.+.|.++|+|+++|+||+|.|... ...+.++.++++.+.+ .++++++||||||.
T Consensus 4 ~~~iv~~HG~~~~~-~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~-~~~~~~~~~~~~~~~~----~~~~~lvG~S~Gg~ 77 (245)
T TIGR01738 4 NVHLVLIHGWGMNA-EVFRCLDEELSAHFTLHLVDLPGHGRSRGF-GPLSLADAAEAIAAQA----PDPAIWLGWSLGGL 77 (245)
T ss_pred CceEEEEcCCCCch-hhHHHHHHhhccCeEEEEecCCcCccCCCC-CCcCHHHHHHHHHHhC----CCCeEEEEEcHHHH
Confidence 47899999999998 899999999988899999999999998754 3356666666655432 37899999999999
Q ss_pred HHHHHHHhCCcccceEEEecCCCCCCCcc------hHHHhhh----hh------hhhhh--hccC-CCChHHHHHHhhhh
Q 024042 134 VAYHMARMWPERVEKVVIASSGVNMKRGD------NEALVKR----AN------LERID--HLML-PESASQLRTLTGLA 194 (273)
Q Consensus 134 ~a~~~a~~~~~~v~~~v~~~~~~~~~~~~------~~~~~~~----~~------~~~~~--~~~~-~~~~~~~~~~~~~~ 194 (273)
+++.++.++|++++++|++++........ ....... .. ...+. .... ..............
T Consensus 78 ~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (245)
T TIGR01738 78 VALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTARQDARALKQTL 157 (245)
T ss_pred HHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCccchHHHHHHHHh
Confidence 99999999999999999998765332110 0000000 00 00000 0000 00000000000000
Q ss_pred --------------hccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhh
Q 024042 195 --------------VSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGL 260 (273)
Q Consensus 195 --------------~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 260 (273)
............+.++..|+++++|++|.++|.+..+.+.+.+ +++++++++++||+++.++|++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~ 236 (245)
T TIGR01738 158 LARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLA-PHSELYIFAKAAHAPFLSHAEA 236 (245)
T ss_pred hccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhC-CCCeEEEeCCCCCCccccCHHH
Confidence 0000011112334567779999999999999999999999888 8999999999999999999999
Q ss_pred HHHHHHHHh
Q 024042 261 FNSIVKNFL 269 (273)
Q Consensus 261 ~~~~i~~fl 269 (273)
+.+.|.+|+
T Consensus 237 ~~~~i~~fi 245 (245)
T TIGR01738 237 FCALLVAFK 245 (245)
T ss_pred HHHHHHhhC
Confidence 999999986
No 27
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.97 E-value=1e-29 Score=201.07 Aligned_cols=233 Identities=24% Similarity=0.331 Sum_probs=166.2
Q ss_pred eEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHH
Q 024042 28 QTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQ 107 (273)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~ 107 (273)
..+.. ++.+++|+..+ .+++++|||+||++++. ..|..+...|.+.|+|+++|+||||.|.......+..+.
T Consensus 112 ~~~~~-~~~~i~~~~~g------~~~~~~vl~~HG~~~~~-~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~ 183 (371)
T PRK14875 112 RKARI-GGRTVRYLRLG------EGDGTPVVLIHGFGGDL-NNWLFNHAALAAGRPVIALDLPGHGASSKAVGAGSLDEL 183 (371)
T ss_pred CcceE-cCcEEEEeccc------CCCCCeEEEECCCCCcc-chHHHHHHHHhcCCEEEEEcCCCCCCCCCCCCCCCHHHH
Confidence 44555 67788888775 34578999999999998 899999999988899999999999999766666789999
Q ss_pred HHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHH---Hhhhhh---h-hhhhhccC
Q 024042 108 AASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEA---LVKRAN---L-ERIDHLML 180 (273)
Q Consensus 108 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~---~~~~~~---~-~~~~~~~~ 180 (273)
++++.++++.++.++++++|||+||.+|+.++..+|++++++|++++........... +..... . ..+.....
T Consensus 184 ~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (371)
T PRK14875 184 AAAVLAFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLELLFA 263 (371)
T ss_pred HHHHHHHHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHHHhc
Confidence 9999999999998999999999999999999999999999999998764322111000 000000 0 00000000
Q ss_pred ---CCC----------------hHHHHHHhhhhhccC-CCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCC
Q 024042 181 ---PES----------------ASQLRTLTGLAVSKN-LDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKK 240 (273)
Q Consensus 181 ---~~~----------------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~ 240 (273)
... ...+.......+... ..........++.+|+++++|++|.++|.+..+.+. .+
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l~----~~ 339 (371)
T PRK14875 264 DPALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGLP----DG 339 (371)
T ss_pred ChhhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhcc----CC
Confidence 000 000000000000000 011122245567789999999999999987665432 57
Q ss_pred cEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 241 ARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 241 ~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
.++.+++++||+.++++|+++.+.|.+||++.
T Consensus 340 ~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 371 (371)
T PRK14875 340 VAVHVLPGAGHMPQMEAAADVNRLLAEFLGKA 371 (371)
T ss_pred CeEEEeCCCCCChhhhCHHHHHHHHHHHhccC
Confidence 89999999999999999999999999999863
No 28
>PRK07581 hypothetical protein; Validated
Probab=99.97 E-value=2.8e-30 Score=201.21 Aligned_cols=233 Identities=16% Similarity=0.136 Sum_probs=152.7
Q ss_pred CcceEEeecCCccCCCCC-CCCCeEEEEcCCCCchhHhHHHHH---HhhcC-CCeEEeecCCCCCCCCCCCc---cccHH
Q 024042 34 DETTLHFWGPKLEDDHKT-LKKPSLVLIHGFGPEAIWQWRKQV---QFFAP-HFNVYVPDLIFFGHSTTRSI---QRTEL 105 (273)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~-~~~~~vi~~hG~~~~~~~~~~~~~---~~l~~-~~~v~~~d~~g~g~s~~~~~---~~~~~ 105 (273)
+|.+++|...| +.. ++.|+||++||++++. ..|..++ +.|.. +|+|+++|+||||.|..+.. .++.+
T Consensus 24 ~~~~l~y~~~G----~~~~~~~~~vll~~~~~~~~-~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 98 (339)
T PRK07581 24 PDARLAYKTYG----TLNAAKDNAILYPTWYSGTH-QDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAA 98 (339)
T ss_pred CCceEEEEecC----ccCCCCCCEEEEeCCCCCCc-ccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCC
Confidence 67889999987 211 3446677777777666 5565543 46754 59999999999999975532 22322
Q ss_pred -----HHHHHHHH----HHHHhCCcc-EEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchH---HHh-----
Q 024042 106 -----FQAASLGK----LLEKIGVER-FSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNE---ALV----- 167 (273)
Q Consensus 106 -----~~~~~~~~----~~~~~~~~~-i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~---~~~----- 167 (273)
..++++.. ++++++.++ ++|+||||||.+|+.+|.++|++|+++|++++.......... ...
T Consensus 99 ~~~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~ 178 (339)
T PRK07581 99 RFPHVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTA 178 (339)
T ss_pred CCCceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHh
Confidence 23444443 667899999 479999999999999999999999999999875532110000 000
Q ss_pred ---------------------hhhhh----hh-hhhccCC----CC-hHHHHHHhhhh----------------hc----
Q 024042 168 ---------------------KRANL----ER-IDHLMLP----ES-ASQLRTLTGLA----------------VS---- 196 (273)
Q Consensus 168 ---------------------~~~~~----~~-~~~~~~~----~~-~~~~~~~~~~~----------------~~---- 196 (273)
..... .. +...... .. ........... ..
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 258 (339)
T PRK07581 179 DPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDIS 258 (339)
T ss_pred CCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccc
Confidence 00000 00 0000000 00 01010110000 00
Q ss_pred cCC--CCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCC-CCCCcCcCChhhHHHHHHHHhccc
Q 024042 197 KNL--DIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIEN-TSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 197 ~~~--~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
... .......+.++.+|+|+|+|++|..+|++..+.+.+.+ ++.+++++++ +||+.+.++++++...|.+||++.
T Consensus 259 ~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~i-p~a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~ 336 (339)
T PRK07581 259 RNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALI-PNAELRPIESIWGHLAGFGQNPADIAFIDAALKEL 336 (339)
T ss_pred cCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhC-CCCeEEEeCCCCCccccccCcHHHHHHHHHHHHHH
Confidence 000 00122345567789999999999999999999999998 8999999998 899999999999999999999874
No 29
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.97 E-value=1.1e-29 Score=191.05 Aligned_cols=228 Identities=16% Similarity=0.197 Sum_probs=158.4
Q ss_pred CCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCc-cccHHHHHHH
Q 024042 33 DDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSI-QRTELFQAAS 110 (273)
Q Consensus 33 ~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~-~~~~~~~~~~ 110 (273)
++|.+++|... ++++|+|||+||++.+. ..|..+...|.+. |+|+++|+||||.|..... ..+.++.+++
T Consensus 4 ~~~~~~~~~~~-------~~~~p~vvliHG~~~~~-~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~ 75 (273)
T PLN02211 4 ENGEEVTDMKP-------NRQPPHFVLIHGISGGS-WCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKP 75 (273)
T ss_pred ccccccccccc-------cCCCCeEEEECCCCCCc-CcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHH
Confidence 36777877774 45678999999999998 8999999999764 9999999999998754332 3688999999
Q ss_pred HHHHHHHhC-CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcch-HHHhhhhh-hhhh------------
Q 024042 111 LGKLLEKIG-VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN-EALVKRAN-LERI------------ 175 (273)
Q Consensus 111 ~~~~~~~~~-~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~-~~~~~~~~-~~~~------------ 175 (273)
+.++++.+. .++++++||||||.++..++.++|++++++|++++......... ........ ....
T Consensus 76 l~~~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (273)
T PLN02211 76 LIDFLSSLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDVYELGFGLGP 155 (273)
T ss_pred HHHHHHhcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccccchhhhccceeeeeccCC
Confidence 999999885 48999999999999999999999999999999987543211111 00000000 0000
Q ss_pred --------------hhccCCCChHHHHHHhhhhhc-cCCCCC----hhhHHhhh-hccEEEEecCCCCCCChHHHHHHHH
Q 024042 176 --------------DHLMLPESASQLRTLTGLAVS-KNLDIV----PDFFFNDF-VHDVLIVWGDQDQIFPLKMATELKE 235 (273)
Q Consensus 176 --------------~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~-~~p~l~i~g~~D~~~~~~~~~~~~~ 235 (273)
...+....+............ ...... .......+ ..|+++|.|++|..+|++..+.+.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~ 235 (273)
T PLN02211 156 DQPPTSAIIKKEFRRKILYQMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIK 235 (273)
T ss_pred CCCCceeeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHHHHHHHHH
Confidence 000000000000000000000 000000 00011233 4599999999999999999999999
Q ss_pred HhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhc
Q 024042 236 LLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 236 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
.+ +..+++.++ +||.+++++|+++.+.|.++..
T Consensus 236 ~~-~~~~~~~l~-~gH~p~ls~P~~~~~~i~~~a~ 268 (273)
T PLN02211 236 RW-PPSQVYELE-SDHSPFFSTPFLLFGLLIKAAA 268 (273)
T ss_pred hC-CccEEEEEC-CCCCccccCHHHHHHHHHHHHH
Confidence 98 777999997 8999999999999999988764
No 30
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.97 E-value=4.2e-29 Score=190.84 Aligned_cols=234 Identities=21% Similarity=0.242 Sum_probs=159.3
Q ss_pred EEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcC-CCeEEeecCCCCCCCCCCCc---cccH
Q 024042 29 TIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAP-HFNVYVPDLIFFGHSTTRSI---QRTE 104 (273)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~g~s~~~~~---~~~~ 104 (273)
.+++ +|..+.|...+ . .+.+++|||+||++++....|..+...+.+ +|+|+++|+||+|.|..+.. .++.
T Consensus 6 ~~~~-~~~~~~~~~~~----~-~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~ 79 (288)
T TIGR01250 6 IITV-DGGYHLFTKTG----G-EGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTI 79 (288)
T ss_pred eecC-CCCeEEEEecc----C-CCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccH
Confidence 4555 66677777764 1 234689999999866653556677777776 49999999999999986532 2688
Q ss_pred HHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcch--HHHhhhhh---hhhhhhcc
Q 024042 105 LFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN--EALVKRAN---LERIDHLM 179 (273)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~ 179 (273)
++.++++.+++++++.++++++|||+||.+++.++..+|++++++|++++......... ........ ........
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (288)
T TIGR01250 80 DYFVDELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKELPPEVRAAIKRCE 159 (288)
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhhcChhHHHHHHHHH
Confidence 99999999999999988999999999999999999999999999999887543221100 00000000 00000000
Q ss_pred ------------------------CCCChHHHHHHhhhh---h----ccC---------CCCChhhHHhhhhccEEEEec
Q 024042 180 ------------------------LPESASQLRTLTGLA---V----SKN---------LDIVPDFFFNDFVHDVLIVWG 219 (273)
Q Consensus 180 ------------------------~~~~~~~~~~~~~~~---~----~~~---------~~~~~~~~~~~~~~p~l~i~g 219 (273)
............... . ... ........+.++.+|+++++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G 239 (288)
T TIGR01250 160 ASGDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVG 239 (288)
T ss_pred hccCcchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEec
Confidence 000000000000000 0 000 000112234566779999999
Q ss_pred CCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhc
Q 024042 220 DQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 220 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
++|.+ +++..+.+.+.+ ++.++++++++||+.+.++|+++.+.|.+||+
T Consensus 240 ~~D~~-~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 240 EFDTM-TPEAAREMQELI-AGSRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred CCCcc-CHHHHHHHHHhc-cCCeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 99985 667888888888 88999999999999999999999999999985
No 31
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.97 E-value=7.1e-31 Score=193.69 Aligned_cols=203 Identities=23% Similarity=0.343 Sum_probs=150.6
Q ss_pred EEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCc--cccHHHHHHHHHHHHHHhCCccEEEEEeccchHH
Q 024042 57 LVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSI--QRTELFQAASLGKLLEKIGVERFSVVGTSYGGFV 134 (273)
Q Consensus 57 vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~ 134 (273)
|||+||++++. ..|..+++.|+++|+|+++|+||+|.|..... ..+.++.++++.+++++++.++++++|||+||.+
T Consensus 1 vv~~hG~~~~~-~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~ 79 (228)
T PF12697_consen 1 VVFLHGFGGSS-ESWDPLAEALARGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGMI 79 (228)
T ss_dssp EEEE-STTTTG-GGGHHHHHHHHTTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHH
T ss_pred eEEECCCCCCH-HHHHHHHHHHhCCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccccccccccccccccccc
Confidence 79999999999 99999999998779999999999999987663 5788999999999999999999999999999999
Q ss_pred HHHHHHhCCcccceEEEecCCCCCCCcc----hHHHhhhhh-----------hhhhhhccCCCChHHHHHHhhh------
Q 024042 135 AYHMARMWPERVEKVVIASSGVNMKRGD----NEALVKRAN-----------LERIDHLMLPESASQLRTLTGL------ 193 (273)
Q Consensus 135 a~~~a~~~~~~v~~~v~~~~~~~~~~~~----~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~------ 193 (273)
++.++.++|++++++|+++++....... ......... ...+.... ...........
T Consensus 80 a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 156 (228)
T PF12697_consen 80 ALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWF---DGDEPEDLIRSSRRALA 156 (228)
T ss_dssp HHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---THHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccceeecccccccccccccccchhhhhhhhcccccccccccccccccc---ccccccccccccccccc
Confidence 9999999999999999999987543211 001111000 00011001 11111111100
Q ss_pred -hhcc-CCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHH
Q 024042 194 -AVSK-NLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSI 264 (273)
Q Consensus 194 -~~~~-~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~ 264 (273)
.... ...........++..|+++++|++|.+++.+..+.+.+.. +++++++++++||+.+.++|++++++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 157 EYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKL-PNAELVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp HHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHS-TTEEEEEETTSSSTHHHHSHHHHHHH
T ss_pred cccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHC-CCCEEEEECCCCCccHHHCHHHHhcC
Confidence 0000 0011122445566779999999999999999999999988 89999999999999999999998763
No 32
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.97 E-value=4.3e-30 Score=200.02 Aligned_cols=239 Identities=20% Similarity=0.260 Sum_probs=160.1
Q ss_pred CCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhH-----------hHHHHHH---hhc-CCCeEEeec
Q 024042 24 GLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIW-----------QWRKQVQ---FFA-PHFNVYVPD 88 (273)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~-----------~~~~~~~---~l~-~~~~v~~~d 88 (273)
.+......+ +|.+++|...| .. ++++||+||+.++... .|..++. .|. ++|+|+++|
T Consensus 35 ~~~~~~~~~-~~~~l~y~~~G------~~-~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~D 106 (343)
T PRK08775 35 PLSMRHAGL-EDLRLRYELIG------PA-GAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFD 106 (343)
T ss_pred ceeecCCCC-CCceEEEEEec------cC-CCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEe
Confidence 344444555 88899999886 22 3357777766655512 6887875 564 569999999
Q ss_pred CCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccE-EEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcch--HH
Q 024042 89 LIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERF-SVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN--EA 165 (273)
Q Consensus 89 ~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~--~~ 165 (273)
+||+|.|.. ..++..++++++.+++++++.+++ +++||||||.+|+.++.++|++|+++|++++......... ..
T Consensus 107 l~G~g~s~~--~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~~~~~~ 184 (343)
T PRK08775 107 FIGADGSLD--VPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYAAAWRA 184 (343)
T ss_pred CCCCCCCCC--CCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHHHHHHH
Confidence 999998853 346778899999999999999764 7999999999999999999999999999998654321100 00
Q ss_pred Hhhhh------------h--------h------hhhhhccCCCC-------hHHHHHHhhh---hhccCCC---------
Q 024042 166 LVKRA------------N--------L------ERIDHLMLPES-------ASQLRTLTGL---AVSKNLD--------- 200 (273)
Q Consensus 166 ~~~~~------------~--------~------~~~~~~~~~~~-------~~~~~~~~~~---~~~~~~~--------- 200 (273)
..... . . ..+...+.... .......... .......
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 264 (343)
T PRK08775 185 LQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSE 264 (343)
T ss_pred HHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHH
Confidence 00000 0 0 00000000000 0000000000 0000000
Q ss_pred --CChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCC-CCCCcCcCChhhHHHHHHHHhccc
Q 024042 201 --IVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIEN-TSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 201 --~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
........++..|+|+++|++|.++|.+..+.+.+.+.++.+++++++ +||..++|+|+++.+.|.+||++.
T Consensus 265 ~~~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~~ 339 (343)
T PRK08775 265 SIDLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILTTALRST 339 (343)
T ss_pred HHhhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHhc
Confidence 000112346677999999999999999999999888756899999985 999999999999999999999763
No 33
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.97 E-value=1.5e-29 Score=189.31 Aligned_cols=214 Identities=29% Similarity=0.449 Sum_probs=149.3
Q ss_pred CCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCc--cccHHHHHHH-HHHHHHHhCCccEEEEEecc
Q 024042 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSI--QRTELFQAAS-LGKLLEKIGVERFSVVGTSY 130 (273)
Q Consensus 54 ~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~--~~~~~~~~~~-~~~~~~~~~~~~i~l~G~S~ 130 (273)
+|+||++||++++. ..|..+.+.|+++|+|+++|+||+|.|..+.. ..+.++.+++ +..+++.++.++++++|||+
T Consensus 1 ~~~vv~~hG~~~~~-~~~~~~~~~L~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 79 (251)
T TIGR03695 1 KPVLVFLHGFLGSG-ADWQALIELLGPHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIEPFFLVGYSM 79 (251)
T ss_pred CCEEEEEcCCCCch-hhHHHHHHHhcccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCCeEEEEEecc
Confidence 37899999999998 89999999998669999999999999976543 4577788888 77788888889999999999
Q ss_pred chHHHHHHHHhCCcccceEEEecCCCCCCCcchHH--------Hhhhhh---hhhhhh------ccCC---CChHHHHHH
Q 024042 131 GGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEA--------LVKRAN---LERIDH------LMLP---ESASQLRTL 190 (273)
Q Consensus 131 Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~--------~~~~~~---~~~~~~------~~~~---~~~~~~~~~ 190 (273)
||.+|+.++.++|+.+++++++++........... ...... ...... .+.. .........
T Consensus 80 Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (251)
T TIGR03695 80 GGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKNLPPEQRQAL 159 (251)
T ss_pred HHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeecccCChHHhHHH
Confidence 99999999999999999999998765433211000 000000 000000 0000 000000000
Q ss_pred hhhhhcc--------------CCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcC
Q 024042 191 TGLAVSK--------------NLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIE 256 (273)
Q Consensus 191 ~~~~~~~--------------~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 256 (273)
....... ............+.+|+++++|++|..++ +..+.+.+.. ++.+++.++++||+++++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~-~~~~~~~~~~~gH~~~~e 237 (251)
T TIGR03695 160 RAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLL-PNLTLVIIANAGHNIHLE 237 (251)
T ss_pred HHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcC-CCCcEEEEcCCCCCcCcc
Confidence 0000000 00011122345567799999999998764 5666777777 889999999999999999
Q ss_pred ChhhHHHHHHHHhc
Q 024042 257 NPGLFNSIVKNFLR 270 (273)
Q Consensus 257 ~~~~~~~~i~~fl~ 270 (273)
+|+++.+.|.+|++
T Consensus 238 ~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 238 NPEAFAKILLAFLE 251 (251)
T ss_pred ChHHHHHHHHHHhC
Confidence 99999999999984
No 34
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.97 E-value=2.2e-29 Score=196.61 Aligned_cols=233 Identities=18% Similarity=0.226 Sum_probs=157.7
Q ss_pred CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhH----------hHHHHH---Hhh-cCCCeEEeecCCC--CCCCCC
Q 024042 34 DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIW----------QWRKQV---QFF-APHFNVYVPDLIF--FGHSTT 97 (273)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~----------~~~~~~---~~l-~~~~~v~~~d~~g--~g~s~~ 97 (273)
+|.+++|..+|+++ ...+++||++||++++... .|..++ ..| .++|+|+++|+|| +|.|..
T Consensus 14 ~~~~~~y~~~g~~~---~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~ 90 (351)
T TIGR01392 14 SDVRVAYETYGTLN---AERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGP 90 (351)
T ss_pred CCceEEEEeccccC---CCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCC
Confidence 77889999987211 1345799999999987622 367665 244 5559999999999 555542
Q ss_pred C------------CccccHHHHHHHHHHHHHHhCCcc-EEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchH
Q 024042 98 R------------SIQRTELFQAASLGKLLEKIGVER-FSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNE 164 (273)
Q Consensus 98 ~------------~~~~~~~~~~~~~~~~~~~~~~~~-i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~ 164 (273)
. ...++++++++++.+++++++.++ ++++||||||.+++.++.++|++++++|++++..........
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 170 (351)
T TIGR01392 91 SSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIA 170 (351)
T ss_pred CCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHH
Confidence 1 113688999999999999999998 999999999999999999999999999999987654321100
Q ss_pred --H-Hhhhhh-------------------h--------------hhhhhccCCCC---------------hHHHHHHhh-
Q 024042 165 --A-LVKRAN-------------------L--------------ERIDHLMLPES---------------ASQLRTLTG- 192 (273)
Q Consensus 165 --~-~~~~~~-------------------~--------------~~~~~~~~~~~---------------~~~~~~~~~- 192 (273)
. ...... . ..+...+.... .........
T Consensus 171 ~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (351)
T TIGR01392 171 FNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQGD 250 (351)
T ss_pred HHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHHH
Confidence 0 000000 0 00000000000 000000000
Q ss_pred hhh--------------ccCCCC-----ChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEE-----EeCC
Q 024042 193 LAV--------------SKNLDI-----VPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLE-----IIEN 248 (273)
Q Consensus 193 ~~~--------------~~~~~~-----~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 248 (273)
... ....+. .-...+.++..|+|+|+|++|.++|++.++.+.+.+ ++.++. ++++
T Consensus 251 ~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i-~~~~~~v~~~~i~~~ 329 (351)
T TIGR01392 251 KFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKAL-PAAGLRVTYVEIESP 329 (351)
T ss_pred HHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHH-hhcCCceEEEEeCCC
Confidence 000 000000 012445667779999999999999999999999999 676654 5678
Q ss_pred CCCCcCcCChhhHHHHHHHHhc
Q 024042 249 TSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 249 ~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
+||.+++++|+++.+.|.+||+
T Consensus 330 ~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 330 YGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred CCcchhhcCHHHHHHHHHHHhC
Confidence 9999999999999999999985
No 35
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.97 E-value=5.2e-29 Score=195.85 Aligned_cols=234 Identities=18% Similarity=0.178 Sum_probs=157.9
Q ss_pred CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHh-------------HHHHH----HhhcCCCeEEeecCCCC-CCC
Q 024042 34 DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQ-------------WRKQV----QFFAPHFNVYVPDLIFF-GHS 95 (273)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~-------------~~~~~----~~l~~~~~v~~~d~~g~-g~s 95 (273)
+|.+++|..+|.. ....+|+|||+||++++. .. |..++ ..+.++|+|+++|++|+ |.|
T Consensus 31 ~~~~~~y~~~G~~---~~~~~p~vvl~HG~~~~~-~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s 106 (379)
T PRK00175 31 PPVELAYETYGTL---NADRSNAVLICHALTGDH-HVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGS 106 (379)
T ss_pred CCceEEEEecccc---CCCCCCEEEEeCCcCCch-hhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCC
Confidence 5566789988721 122368999999999988 53 66665 23355699999999983 444
Q ss_pred CCCC--------------ccccHHHHHHHHHHHHHHhCCcc-EEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCC
Q 024042 96 TTRS--------------IQRTELFQAASLGKLLEKIGVER-FSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKR 160 (273)
Q Consensus 96 ~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~-i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~ 160 (273)
..+. ..++.+++++++.+++++++.++ ++++||||||.+++.++.++|++++++|++++......
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 186 (379)
T PRK00175 107 TGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSA 186 (379)
T ss_pred CCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCH
Confidence 3221 14689999999999999999998 58999999999999999999999999999997664322
Q ss_pred cchHH---Hhhhhh----------------------------------hhhhhhccCC----CCh-------HHHHHHh-
Q 024042 161 GDNEA---LVKRAN----------------------------------LERIDHLMLP----ESA-------SQLRTLT- 191 (273)
Q Consensus 161 ~~~~~---~~~~~~----------------------------------~~~~~~~~~~----~~~-------~~~~~~~- 191 (273)
..... ...... ...+...+.. ... .......
T Consensus 187 ~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~ 266 (379)
T PRK00175 187 QNIAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLR 266 (379)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHH
Confidence 10000 000000 0000000000 000 0000000
Q ss_pred -------hhh----------hccCCC------CChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCc----EEE
Q 024042 192 -------GLA----------VSKNLD------IVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKA----RLE 244 (273)
Q Consensus 192 -------~~~----------~~~~~~------~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~----~~~ 244 (273)
... .....+ ..-...+.++.+|+|+|+|++|.++|++..+.+.+.+ ++. +++
T Consensus 267 ~~~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i-~~a~~~~~l~ 345 (379)
T PRK00175 267 YQGDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDAL-LAAGADVSYA 345 (379)
T ss_pred HHHHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHH-HhcCCCeEEE
Confidence 000 000000 0123445677789999999999999999999999999 555 777
Q ss_pred EeC-CCCCCcCcCChhhHHHHHHHHhccc
Q 024042 245 IIE-NTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 245 ~~~-~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
+++ ++||..++++|+++++.|.+||++.
T Consensus 346 ~i~~~~GH~~~le~p~~~~~~L~~FL~~~ 374 (379)
T PRK00175 346 EIDSPYGHDAFLLDDPRYGRLVRAFLERA 374 (379)
T ss_pred EeCCCCCchhHhcCHHHHHHHHHHHHHhh
Confidence 775 8999999999999999999999864
No 36
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=2e-28 Score=193.29 Aligned_cols=220 Identities=19% Similarity=0.250 Sum_probs=146.2
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccc-c----HHHHHHHHHHHHHHhCCccEEE
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQR-T----ELFQAASLGKLLEKIGVERFSV 125 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~-~----~~~~~~~~~~~~~~~~~~~i~l 125 (273)
++++|+||++||++++. ..|...+..|.++|+|+++|+||+|.|..+.... + .+..++++.++++.++.+++++
T Consensus 102 ~~~~p~vvllHG~~~~~-~~~~~~~~~L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~l 180 (402)
T PLN02894 102 KEDAPTLVMVHGYGASQ-GFFFRNFDALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFIL 180 (402)
T ss_pred CCCCCEEEEECCCCcch-hHHHHHHHHHHhCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcCCCCeEE
Confidence 34678999999999888 8888888889888999999999999997654221 1 1234667778888888899999
Q ss_pred EEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchH--HHhh-----------hh----------------------
Q 024042 126 VGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNE--ALVK-----------RA---------------------- 170 (273)
Q Consensus 126 ~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~--~~~~-----------~~---------------------- 170 (273)
+||||||.+|+.++.++|++++++|++++.......... .... ..
T Consensus 181 vGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gp~~~~l~ 260 (402)
T PLN02894 181 LGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLGPWGPNLV 260 (402)
T ss_pred EEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhccchhHHHH
Confidence 999999999999999999999999999876543221100 0000 00
Q ss_pred ---hhhhhhhcc-----CCCChHHHHHHhhhh-------------hccC---CCCChhhHHhhhhccEEEEecCCCCCCC
Q 024042 171 ---NLERIDHLM-----LPESASQLRTLTGLA-------------VSKN---LDIVPDFFFNDFVHDVLIVWGDQDQIFP 226 (273)
Q Consensus 171 ---~~~~~~~~~-----~~~~~~~~~~~~~~~-------------~~~~---~~~~~~~~~~~~~~p~l~i~g~~D~~~~ 226 (273)
....+.... .......+....... .... ........+.++..|+++++|++|.+.+
T Consensus 261 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI~G~~D~i~~ 340 (402)
T PLN02894 261 RRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFIYGRHDWMNY 340 (402)
T ss_pred HHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEEEeCCCCCCc
Confidence 000000000 000001010000000 0000 0001112245566799999999998765
Q ss_pred hHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 227 LKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
...+.+.+.....+++++++++||+.+.|+|+++.+.+.+|++..
T Consensus 341 -~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~ 385 (402)
T PLN02894 341 -EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKY 385 (402)
T ss_pred -HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHh
Confidence 555556655535689999999999999999999999999887653
No 37
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.97 E-value=2e-28 Score=191.65 Aligned_cols=242 Identities=15% Similarity=0.155 Sum_probs=161.5
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCc-ccc
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSI-QRT 103 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~-~~~ 103 (273)
....+..+++..+++..+.++ ....+++||++||++++. ..|..+++.|.+. |+|+++|+||||.|..... ..+
T Consensus 111 ~~~~~~~~~~~~l~~~~~~p~---~~~~~~~Vl~lHG~~~~~-~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~ 186 (395)
T PLN02652 111 ATSLFYGARRNALFCRSWAPA---AGEMRGILIIIHGLNEHS-GRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPS 186 (395)
T ss_pred EEEEEECCCCCEEEEEEecCC---CCCCceEEEEECCchHHH-HHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcC
Confidence 334455567788888877631 234567999999999887 8899999999765 9999999999999986543 236
Q ss_pred HHHHHHHHHHHHHHhCC----ccEEEEEeccchHHHHHHHHhCC---cccceEEEecCCCCCCCcchH-HHhhhhhhhhh
Q 024042 104 ELFQAASLGKLLEKIGV----ERFSVVGTSYGGFVAYHMARMWP---ERVEKVVIASSGVNMKRGDNE-ALVKRANLERI 175 (273)
Q Consensus 104 ~~~~~~~~~~~~~~~~~----~~i~l~G~S~Gg~~a~~~a~~~~---~~v~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~ 175 (273)
.+.+.+|+..+++.+.. .+++++||||||.+++.++. +| ++++++|+.+|.......... ...........
T Consensus 187 ~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~~~~~~l~~~~~ 265 (395)
T PLN02652 187 LDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIVGAVAPIFSLVA 265 (395)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHHHHHHHHHHHhC
Confidence 77778888888887642 47999999999999998775 45 479999999987654322110 00000000000
Q ss_pred hhc-c---------CCCChHHHHHHhhh-hhccCCCC---------C---hhhHHhhhhccEEEEecCCCCCCChHHHHH
Q 024042 176 DHL-M---------LPESASQLRTLTGL-AVSKNLDI---------V---PDFFFNDFVHDVLIVWGDQDQIFPLKMATE 232 (273)
Q Consensus 176 ~~~-~---------~~~~~~~~~~~~~~-~~~~~~~~---------~---~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~ 232 (273)
... + .............. ........ . ....+.++..|+|+++|++|.++|++.++.
T Consensus 266 p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~ 345 (395)
T PLN02652 266 PRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDPLASQD 345 (395)
T ss_pred CCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCHHHHHH
Confidence 000 0 00011111111000 00000000 0 011224456799999999999999999999
Q ss_pred HHHHhc-CCcEEEEeCCCCCCcCcC-ChhhHHHHHHHHhccc
Q 024042 233 LKELLG-KKARLEIIENTSHVPQIE-NPGLFNSIVKNFLRGS 272 (273)
Q Consensus 233 ~~~~~~-~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~~ 272 (273)
+++... .+++++++++++|..+.+ +++++.+.+.+||+++
T Consensus 346 l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~ 387 (395)
T PLN02652 346 LYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKR 387 (395)
T ss_pred HHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHH
Confidence 998862 458899999999998666 7899999999999865
No 38
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.97 E-value=2.7e-28 Score=184.04 Aligned_cols=242 Identities=19% Similarity=0.212 Sum_probs=167.1
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCC-CCCc-cc
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHST-TRSI-QR 102 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~-~~~~-~~ 102 (273)
....+...||..++|+.+.+ ..+...+||++||.+.+. ..|..++..|... |.|+++|+||||.|. +... ..
T Consensus 10 ~~~~~~~~d~~~~~~~~~~~----~~~~~g~Vvl~HG~~Eh~-~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~ 84 (298)
T COG2267 10 TEGYFTGADGTRLRYRTWAA----PEPPKGVVVLVHGLGEHS-GRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVD 84 (298)
T ss_pred ccceeecCCCceEEEEeecC----CCCCCcEEEEecCchHHH-HHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCch
Confidence 44556666999999999862 223337999999999999 8999999988887 999999999999997 3333 33
Q ss_pred cHHHHHHHHHHHHHHhC----CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhh---hhh
Q 024042 103 TELFQAASLGKLLEKIG----VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANL---ERI 175 (273)
Q Consensus 103 ~~~~~~~~~~~~~~~~~----~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~---~~~ 175 (273)
+..++.+|+..+++... ..+++++||||||.+|+.++.+++.+++++|+.+|.................. ..+
T Consensus 85 ~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~~~ 164 (298)
T COG2267 85 SFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLALKLLGRI 164 (298)
T ss_pred hHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHhccccccc
Confidence 67888899998888774 37899999999999999999999999999999999888763110111000000 000
Q ss_pred ------hh----c----cCCCChHHHHHHhhhhhccCCCCCh--------------hhHHhhhhccEEEEecCCCCCCC-
Q 024042 176 ------DH----L----MLPESASQLRTLTGLAVSKNLDIVP--------------DFFFNDFVHDVLIVWGDQDQIFP- 226 (273)
Q Consensus 176 ------~~----~----~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~p~l~i~g~~D~~~~- 226 (273)
.. . .........+.+............. ......+..|+|+++|++|.+++
T Consensus 165 ~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~~ 244 (298)
T COG2267 165 RPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVDN 244 (298)
T ss_pred ccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCccccC
Confidence 00 0 0011111111111111000000000 01122333499999999999999
Q ss_pred hHHHHHHHHHhc-CCcEEEEeCCCCCCcCcC-Ch--hhHHHHHHHHhccc
Q 024042 227 LKMATELKELLG-KKARLEIIENTSHVPQIE-NP--GLFNSIVKNFLRGS 272 (273)
Q Consensus 227 ~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~-~~--~~~~~~i~~fl~~~ 272 (273)
.+...++.+..+ +++++++++|+.|..+.| +. +++.+.+.+|+.++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~ 294 (298)
T COG2267 245 VEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEA 294 (298)
T ss_pred cHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhh
Confidence 687888777774 668999999999987765 44 78899999999865
No 39
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.97 E-value=4e-28 Score=186.26 Aligned_cols=234 Identities=19% Similarity=0.197 Sum_probs=152.8
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhc-CCCeEEeecCCCCCCCCCCCc--cc
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFA-PHFNVYVPDLIFFGHSTTRSI--QR 102 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~g~s~~~~~--~~ 102 (273)
...++...+|.+++|...+ ..+.++|||+||++++. ..+ .+...+. .+|+|+++|+||||.|..... ..
T Consensus 5 ~~~~~~~~~~~~l~y~~~g------~~~~~~lvllHG~~~~~-~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~ 76 (306)
T TIGR01249 5 VSGYLNVSDNHQLYYEQSG------NPDGKPVVFLHGGPGSG-TDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEEN 76 (306)
T ss_pred cCCeEEcCCCcEEEEEECc------CCCCCEEEEECCCCCCC-CCH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccC
Confidence 4578888889999999886 33467899999987765 332 3334444 359999999999999986543 34
Q ss_pred cHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcch------------HHHhhhh
Q 024042 103 TELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN------------EALVKRA 170 (273)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~------------~~~~~~~ 170 (273)
+.++.++++..++++++.++++++||||||.+++.++.++|++++++|++++......... ..+....
T Consensus 77 ~~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (306)
T TIGR01249 77 TTWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEWSWFYEGGASMIYPDAWQRFM 156 (306)
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHHHHHHhcchhhhCHHHHHHHh
Confidence 6778899999999999999999999999999999999999999999999987543221000 0000000
Q ss_pred h-----------hhhhhhccCCCChHH---HHHHh----hhhhccC---------------------------CCCCh--
Q 024042 171 N-----------LERIDHLMLPESASQ---LRTLT----GLAVSKN---------------------------LDIVP-- 203 (273)
Q Consensus 171 ~-----------~~~~~~~~~~~~~~~---~~~~~----~~~~~~~---------------------------~~~~~-- 203 (273)
. ...+........... ..... ....... ....+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (306)
T TIGR01249 157 DSIPENERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYFVNKGFLDVE 236 (306)
T ss_pred hhCChhhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHHHHhchhcCc
Confidence 0 000000000001000 00000 0000000 00000
Q ss_pred ---hhHHhhh-hccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 204 ---DFFFNDF-VHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 204 ---~~~~~~~-~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
.....++ ..|+++++|++|.++|.+.++.+++.+ ++.++++++++||..+. + +..+.|.+|+.+
T Consensus 237 ~~~~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~-~~~~~~~~~~~gH~~~~--~-~~~~~i~~~~~~ 304 (306)
T TIGR01249 237 NFILDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAF-PEAELKVTNNAGHSAFD--P-NNLAALVHALET 304 (306)
T ss_pred hHHHHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhC-CCCEEEEECCCCCCCCC--h-HHHHHHHHHHHH
Confidence 0112334 369999999999999999999999999 89999999999999753 2 234555555543
No 40
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.96 E-value=1.7e-27 Score=187.97 Aligned_cols=238 Identities=16% Similarity=0.142 Sum_probs=157.6
Q ss_pred CceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCcccc
Q 024042 25 LSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRT 103 (273)
Q Consensus 25 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~ 103 (273)
++...+...+|.++..+...|+ .+++.|+||++||+++.....|..+.+.|.+. |.|+++|+||+|.|.......+
T Consensus 168 ~e~v~i~~~~g~~l~g~l~~P~---~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~~d 244 (414)
T PRK05077 168 LKELEFPIPGGGPITGFLHLPK---GDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLTQD 244 (414)
T ss_pred eEEEEEEcCCCcEEEEEEEECC---CCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCcccc
Confidence 4555566657767887765432 23456788877777665435677888888776 9999999999999975433234
Q ss_pred HHHHHHHHHHHHHHh---CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhh--hhhhhhhhhc
Q 024042 104 ELFQAASLGKLLEKI---GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVK--RANLERIDHL 178 (273)
Q Consensus 104 ~~~~~~~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 178 (273)
.....+.+.+++... +.++++++|||+||.+|+.+|..+|++++++|+++++............. ......+...
T Consensus 245 ~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~~~~p~~~~~~la~~ 324 (414)
T PRK05077 245 SSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQQQVPEMYLDVLASR 324 (414)
T ss_pred HHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhhhhchHHHHHHHHHH
Confidence 444445566666554 55899999999999999999999999999999999876422111111000 0000001111
Q ss_pred c--CCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcC
Q 024042 179 M--LPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIE 256 (273)
Q Consensus 179 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 256 (273)
+ .......+.......... .......++..|+|+++|++|.++|.+.++.+.+.. ++.+++++|++ ++.+
T Consensus 325 lg~~~~~~~~l~~~l~~~sl~----~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~-~~~~l~~i~~~---~~~e 396 (414)
T PRK05077 325 LGMHDASDEALRVELNRYSLK----VQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSS-ADGKLLEIPFK---PVYR 396 (414)
T ss_pred hCCCCCChHHHHHHhhhccch----hhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhC-CCCeEEEccCC---CccC
Confidence 1 111222222221111000 111112467779999999999999999999988888 89999999975 4467
Q ss_pred ChhhHHHHHHHHhcccC
Q 024042 257 NPGLFNSIVKNFLRGSL 273 (273)
Q Consensus 257 ~~~~~~~~i~~fl~~~l 273 (273)
.++++.+.+.+||+++|
T Consensus 397 ~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 397 NFDKALQEISDWLEDRL 413 (414)
T ss_pred CHHHHHHHHHHHHHHHh
Confidence 89999999999998764
No 41
>PLN02511 hydrolase
Probab=99.96 E-value=4.4e-28 Score=190.62 Aligned_cols=248 Identities=13% Similarity=0.083 Sum_probs=155.9
Q ss_pred CCCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhH-HHHHHh-hcCCCeEEeecCCCCCCCCCCCc
Q 024042 23 AGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQW-RKQVQF-FAPHFNVYVPDLIFFGHSTTRSI 100 (273)
Q Consensus 23 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~-~~~~~~-l~~~~~v~~~d~~g~g~s~~~~~ 100 (273)
..++.+.+.++||..+.+....+........+|+||++||++++....| ..++.. +.++|+|+++|+||||.|.....
T Consensus 69 ~~~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~ 148 (388)
T PLN02511 69 VRYRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTP 148 (388)
T ss_pred CceeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCc
Confidence 3457788999999988865442111112346789999999977652334 445544 45569999999999999976544
Q ss_pred cccHHHHHHHHHHHHHHhCC----ccEEEEEeccchHHHHHHHHhCCcc--cceEEEecCCCCCCCcc-----------h
Q 024042 101 QRTELFQAASLGKLLEKIGV----ERFSVVGTSYGGFVAYHMARMWPER--VEKVVIASSGVNMKRGD-----------N 163 (273)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~----~~i~l~G~S~Gg~~a~~~a~~~~~~--v~~~v~~~~~~~~~~~~-----------~ 163 (273)
........+|+.++++++.. .+++++||||||.+++.++.+++++ +.++++++++....... .
T Consensus 149 ~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~~~~~y~ 228 (388)
T PLN02511 149 QFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKGFNNVYD 228 (388)
T ss_pred CEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhccHHHHHH
Confidence 33334556677777776643 5899999999999999999999887 88888887765431100 0
Q ss_pred HHHhhhhh-h-h----hhhh---cc------CCCChHHHHHHhhhhhccCC-------CCChhhHHhhhhccEEEEecCC
Q 024042 164 EALVKRAN-L-E----RIDH---LM------LPESASQLRTLTGLAVSKNL-------DIVPDFFFNDFVHDVLIVWGDQ 221 (273)
Q Consensus 164 ~~~~~~~~-~-~----~~~~---~~------~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~p~l~i~g~~ 221 (273)
..+..... . . .+.. .. .......+............ .......+.++..|+|+|+|++
T Consensus 229 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~d 308 (388)
T PLN02511 229 KALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAAN 308 (388)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCCCeEEEEcCC
Confidence 00000000 0 0 0000 00 00000001111111000000 0112234566778999999999
Q ss_pred CCCCChHHH-HHHHHHhcCCcEEEEeCCCCCCcCcCChhh------HHHHHHHHhcc
Q 024042 222 DQIFPLKMA-TELKELLGKKARLEIIENTSHVPQIENPGL------FNSIVKNFLRG 271 (273)
Q Consensus 222 D~~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~------~~~~i~~fl~~ 271 (273)
|+++|.+.. ....+.. +++++++++++||..++|+|+. +.+.+.+||+.
T Consensus 309 Dpi~p~~~~~~~~~~~~-p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~ 364 (388)
T PLN02511 309 DPIAPARGIPREDIKAN-PNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEA 364 (388)
T ss_pred CCcCCcccCcHhHHhcC-CCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHH
Confidence 999997754 3455556 8999999999999999998865 47888888864
No 42
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.96 E-value=2.3e-27 Score=170.92 Aligned_cols=245 Identities=16% Similarity=0.160 Sum_probs=170.6
Q ss_pred CceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCcc-c
Q 024042 25 LSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQ-R 102 (273)
Q Consensus 25 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~-~ 102 (273)
.....++.++|.++.+..+.|.+. ...+..|+++||++......|..++..|+.. |.|+++|++|||.|++.... .
T Consensus 27 ~~~~~~~n~rG~~lft~~W~p~~~--~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~ 104 (313)
T KOG1455|consen 27 YSESFFTNPRGAKLFTQSWLPLSG--TEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVP 104 (313)
T ss_pred eeeeeEEcCCCCEeEEEecccCCC--CCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCC
Confidence 456678888999998877763221 2456689999999988767888899999887 99999999999999976554 3
Q ss_pred cHHHHHHHHHHHHHHh------CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcch-HHH----hhhhh
Q 024042 103 TELFQAASLGKLLEKI------GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN-EAL----VKRAN 171 (273)
Q Consensus 103 ~~~~~~~~~~~~~~~~------~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~-~~~----~~~~~ 171 (273)
+.+..++|+....+.. ...+..++||||||.+++.++.+.|+..+++|+++|......... ..+ .....
T Consensus 105 ~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l~ 184 (313)
T KOG1455|consen 105 SFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISILTLLS 184 (313)
T ss_pred cHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHHHHHHH
Confidence 7888889988888764 225789999999999999999999999999999999776554431 111 00000
Q ss_pred --hhhhhhccC--------CCChHHHHHHhhhhhccC-C-CC-----------ChhhHHhhhhccEEEEecCCCCCCChH
Q 024042 172 --LERIDHLML--------PESASQLRTLTGLAVSKN-L-DI-----------VPDFFFNDFVHDVLIVWGDQDQIFPLK 228 (273)
Q Consensus 172 --~~~~~~~~~--------~~~~~~~~~~~~~~~~~~-~-~~-----------~~~~~~~~~~~p~l~i~g~~D~~~~~~ 228 (273)
.+.+. ... -..+.............. . .. .-...+.++..|.+++||++|.++.++
T Consensus 185 ~liP~wk-~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~VTDp~ 263 (313)
T KOG1455|consen 185 KLIPTWK-IVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDKVTDPK 263 (313)
T ss_pred HhCCcee-ecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCcccCcH
Confidence 00111 000 011111111111100000 0 00 011123344449999999999999999
Q ss_pred HHHHHHHHh-cCCcEEEEeCCCCCCcCc----CChhhHHHHHHHHhccc
Q 024042 229 MATELKELL-GKKARLEIIENTSHVPQI----ENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 229 ~~~~~~~~~-~~~~~~~~~~~~gH~~~~----~~~~~~~~~i~~fl~~~ 272 (273)
.++.+++.. ..++++++|||.=|.... ++-+.+...|.+||+++
T Consensus 264 ~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 264 VSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred HHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 999999988 478999999999998764 34567888899999875
No 43
>PRK13604 luxD acyl transferase; Provisional
Probab=99.96 E-value=1.7e-27 Score=176.34 Aligned_cols=222 Identities=14% Similarity=0.166 Sum_probs=148.8
Q ss_pred eeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCC-CCCCCCCccccH
Q 024042 27 SQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFF-GHSTTRSIQRTE 104 (273)
Q Consensus 27 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~-g~s~~~~~~~~~ 104 (273)
.+-+.+.+|.+|+.|...|+.. ...+.++||++||++... ..+..+++.|.++ |.|+.+|+||+ |.|.+.....+.
T Consensus 11 ~~~~~~~dG~~L~Gwl~~P~~~-~~~~~~~vIi~HGf~~~~-~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~t~ 88 (307)
T PRK13604 11 DHVICLENGQSIRVWETLPKEN-SPKKNNTILIASGFARRM-DHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEFTM 88 (307)
T ss_pred hheEEcCCCCEEEEEEEcCccc-CCCCCCEEEEeCCCCCCh-HHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccCcc
Confidence 4567888999999999874321 234568999999999987 6799999999887 99999999987 899765543333
Q ss_pred HHHHHHHHHHH---HHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCC
Q 024042 105 LFQAASLGKLL---EKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLP 181 (273)
Q Consensus 105 ~~~~~~~~~~~---~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (273)
.....|+..++ +..+.++++|+||||||.+|+.+|... .++++|+.+|...........+..... .+.....+
T Consensus 89 s~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~d~l~~~~~~~~~--~~p~~~lp 164 (307)
T PRK13604 89 SIGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNLRDTLERALGYDYL--SLPIDELP 164 (307)
T ss_pred cccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccHHHHHHHhhhcccc--cCcccccc
Confidence 33344554444 444567899999999999997777643 399999999988754211111110000 00000000
Q ss_pred CCh----HH--HHHHhhhhhccC--CCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhc-CCcEEEEeCCCCCC
Q 024042 182 ESA----SQ--LRTLTGLAVSKN--LDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLG-KKARLEIIENTSHV 252 (273)
Q Consensus 182 ~~~----~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~ 252 (273)
... .. ...+....+... ....+.....++..|+|+|||++|.+||.+.++.+++.++ .+++++++||++|.
T Consensus 165 ~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~ 244 (307)
T PRK13604 165 EDLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHD 244 (307)
T ss_pred cccccccccccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccc
Confidence 000 00 012222111111 1123445566677899999999999999999999999883 58999999999998
Q ss_pred cC
Q 024042 253 PQ 254 (273)
Q Consensus 253 ~~ 254 (273)
+.
T Consensus 245 l~ 246 (307)
T PRK13604 245 LG 246 (307)
T ss_pred cC
Confidence 74
No 44
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.96 E-value=1.3e-27 Score=215.00 Aligned_cols=251 Identities=19% Similarity=0.236 Sum_probs=170.9
Q ss_pred HHHHHHhhhhCCCceeEEecCCc-ce--EEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecC
Q 024042 13 RIYLRRCFASAGLSSQTIDIDDE-TT--LHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDL 89 (273)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~g-~~--l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~ 89 (273)
.....+++...++....+.+..+ .. ++|...| ..+.+++|||+||++++. ..|..+...|.+.|+|+++|+
T Consensus 1332 ~~~~~~~~~~~~l~~~~~~v~~~~~~~~i~~~~~G-----~~~~~~~vVllHG~~~s~-~~w~~~~~~L~~~~rVi~~Dl 1405 (1655)
T PLN02980 1332 NDVIVRTFKEEQVRTYELRVDVDGFSCLIKVHEVG-----QNAEGSVVLFLHGFLGTG-EDWIPIMKAISGSARCISIDL 1405 (1655)
T ss_pred HHHHHHHhccCCCceEEEEEccCceEEEEEEEecC-----CCCCCCeEEEECCCCCCH-HHHHHHHHHHhCCCEEEEEcC
Confidence 34455566777787777777533 22 3333333 123468999999999999 899999999988899999999
Q ss_pred CCCCCCCCCC--------ccccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCc
Q 024042 90 IFFGHSTTRS--------IQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRG 161 (273)
Q Consensus 90 ~g~g~s~~~~--------~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~ 161 (273)
||||.|.... ..++.+..++++.+++++++.++++++||||||.+|+.++.++|++++++|++++.......
T Consensus 1406 ~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~ 1485 (1655)
T PLN02980 1406 PGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDE 1485 (1655)
T ss_pred CCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCch
Confidence 9999997542 24578889999999999999999999999999999999999999999999999875433211
Q ss_pred chHHHhh-----------hhhhhhh-hhccCCC------ChHHHHHHhhhh------------hcc---CCCCChhhHHh
Q 024042 162 DNEALVK-----------RANLERI-DHLMLPE------SASQLRTLTGLA------------VSK---NLDIVPDFFFN 208 (273)
Q Consensus 162 ~~~~~~~-----------~~~~~~~-~~~~~~~------~~~~~~~~~~~~------------~~~---~~~~~~~~~~~ 208 (273)
....... ......+ ..++... ............ ... .........+.
T Consensus 1486 ~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~ 1565 (1655)
T PLN02980 1486 VARKIRSAKDDSRARMLIDHGLEIFLENWYSGELWKSLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLK 1565 (1655)
T ss_pred HHHHHHhhhhhHHHHHHHhhhHHHHHHHhccHHHhhhhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHh
Confidence 1000000 0000000 0000000 000000000000 000 00011123356
Q ss_pred hhhccEEEEecCCCCCCChHHHHHHHHHhcCC------------cEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 209 DFVHDVLIVWGDQDQIFPLKMATELKELLGKK------------ARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 209 ~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~------------~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
++..|+|+|+|++|..++ +.++.+.+.+ ++ +++++++++||++++|+|+++.+.|.+||++
T Consensus 1566 ~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i-~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~ 1638 (1655)
T PLN02980 1566 QCDTPLLLVVGEKDVKFK-QIAQKMYREI-GKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTR 1638 (1655)
T ss_pred hCCCCEEEEEECCCCccH-HHHHHHHHHc-cccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHh
Confidence 677799999999999875 6667777776 33 5899999999999999999999999999975
No 45
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.96 E-value=4.5e-29 Score=168.25 Aligned_cols=243 Identities=18% Similarity=0.140 Sum_probs=178.8
Q ss_pred hhCCCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC--CeEEeecCCCCCCCCCC
Q 024042 21 ASAGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH--FNVYVPDLIFFGHSTTR 98 (273)
Q Consensus 21 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~g~g~s~~~ 98 (273)
.....++..+.+ +|.+++|..+| .....|++++|.-++....|.+.+..+.+. +.|+++|.||+|.|.++
T Consensus 17 ~~~~~te~kv~v-ng~ql~y~~~G-------~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP 88 (277)
T KOG2984|consen 17 TQSDYTESKVHV-NGTQLGYCKYG-------HGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPP 88 (277)
T ss_pred ccchhhhheeee-cCceeeeeecC-------CCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCC
Confidence 344556777888 99999999996 344578999997666658888887776554 99999999999999987
Q ss_pred CccccHH---HHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhh
Q 024042 99 SIQRTEL---FQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERI 175 (273)
Q Consensus 99 ~~~~~~~---~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (273)
......+ ..+++...+++.+..+++.++|||-||..|+.+|+++++.|..+|++++...........+........+
T Consensus 89 ~Rkf~~~ff~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kW 168 (277)
T KOG2984|consen 89 ERKFEVQFFMKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKW 168 (277)
T ss_pred cccchHHHHHHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhhh
Confidence 7655443 3466778888999999999999999999999999999999999999998776554321111111100000
Q ss_pred hh-----ccCCCChHHHHHHhh-------hhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEE
Q 024042 176 DH-----LMLPESASQLRTLTG-------LAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARL 243 (273)
Q Consensus 176 ~~-----~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 243 (273)
.. ...-...+.++..+. ..........-+..+.++.+|+||++|++|++++...+-.+.... +.+++
T Consensus 169 s~r~R~P~e~~Yg~e~f~~~wa~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~-~~a~~ 247 (277)
T KOG2984|consen 169 SARGRQPYEDHYGPETFRTQWAAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLK-SLAKV 247 (277)
T ss_pred hhhhcchHHHhcCHHHHHHHHHHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhc-ccceE
Confidence 00 000112222222221 111222233455667888889999999999999988888888877 89999
Q ss_pred EEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 244 EIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 244 ~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
.++|.++|.+++..++++...+.+||++.
T Consensus 248 ~~~peGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 248 EIHPEGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred EEccCCCcceeeechHHHHHHHHHHHhcc
Confidence 99999999999999999999999999864
No 46
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.96 E-value=3.2e-27 Score=162.00 Aligned_cols=213 Identities=20% Similarity=0.263 Sum_probs=153.9
Q ss_pred CCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHh---CCccEEEEEe
Q 024042 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKI---GVERFSVVGT 128 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~l~G~ 128 (273)
.+..|+++||+.++. ...+.+.+.|.++ |.|.+|.+||||.........+.+++.+++.+..+.+ +.+.|.++|.
T Consensus 14 G~~AVLllHGFTGt~-~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~Gl 92 (243)
T COG1647 14 GNRAVLLLHGFTGTP-RDVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGL 92 (243)
T ss_pred CCEEEEEEeccCCCc-HHHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHcCCCeEEEEee
Confidence 347999999999999 9999999999988 9999999999998764444556666666666555554 6799999999
Q ss_pred ccchHHHHHHHHhCCcccceEEEecCCCCCCCcc--hHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCC-------
Q 024042 129 SYGGFVAYHMARMWPERVEKVVIASSGVNMKRGD--NEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNL------- 199 (273)
Q Consensus 129 S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 199 (273)
||||.+|+.+|..+| ++++|.++++....... ...+.... .-........................
T Consensus 93 SmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~iie~~l~y~---~~~kk~e~k~~e~~~~e~~~~~~~~~~~~~~~~ 167 (243)
T COG1647 93 SMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRIIIEGLLEYF---RNAKKYEGKDQEQIDKEMKSYKDTPMTTTAQLK 167 (243)
T ss_pred cchhHHHHHHHhhCC--ccceeeecCCcccccchhhhHHHHHHH---HHhhhccCCCHHHHHHHHHHhhcchHHHHHHHH
Confidence 999999999999998 99999999988754332 11111111 11112222333333332222110000
Q ss_pred --CCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh-cCCcEEEEeCCCCCCcCcC-ChhhHHHHHHHHhcc
Q 024042 200 --DIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL-GKKARLEIIENTSHVPQIE-NPGLFNSIVKNFLRG 271 (273)
Q Consensus 200 --~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~ 271 (273)
.......+..+..|++++.|.+|+.+|.+.+..+++.. ..+.++.+++++||....+ ..+.+.+.+..||+.
T Consensus 168 ~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 168 KLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred HHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhhC
Confidence 00112234455559999999999999999999999988 4678999999999987664 678899999999974
No 47
>PRK05855 short chain dehydrogenase; Validated
Probab=99.95 E-value=6.7e-27 Score=195.49 Aligned_cols=233 Identities=14% Similarity=0.160 Sum_probs=154.1
Q ss_pred EEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCc--cccHHH
Q 024042 29 TIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSI--QRTELF 106 (273)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~--~~~~~~ 106 (273)
.++. +|.+++|+.++ +.+.|+|||+||++++. ..|..+.+.|.++|+|+++|+||||.|..+.. .++.++
T Consensus 7 ~~~~-~g~~l~~~~~g------~~~~~~ivllHG~~~~~-~~w~~~~~~L~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~ 78 (582)
T PRK05855 7 VVSS-DGVRLAVYEWG------DPDRPTVVLVHGYPDNH-EVWDGVAPLLADRFRVVAYDVRGAGRSSAPKRTAAYTLAR 78 (582)
T ss_pred EEee-CCEEEEEEEcC------CCCCCeEEEEcCCCchH-HHHHHHHHHhhcceEEEEecCCCCCCCCCCCcccccCHHH
Confidence 3444 89999999886 34578999999999998 89999999997779999999999999986443 468999
Q ss_pred HHHHHHHHHHHhCCcc-EEEEEeccchHHHHHHHHhC--CcccceEEEecCCCCCCCc----------chH---HHhhhh
Q 024042 107 QAASLGKLLEKIGVER-FSVVGTSYGGFVAYHMARMW--PERVEKVVIASSGVNMKRG----------DNE---ALVKRA 170 (273)
Q Consensus 107 ~~~~~~~~~~~~~~~~-i~l~G~S~Gg~~a~~~a~~~--~~~v~~~v~~~~~~~~~~~----------~~~---~~~~~~ 170 (273)
+++++..++++++..+ ++++||||||.+++.++.+. ++++..++.++++...... ... ......
T Consensus 79 ~a~dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (582)
T PRK05855 79 LADDFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARALGQL 158 (582)
T ss_pred HHHHHHHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhcccccchhhhhHHHHHH
Confidence 9999999999998755 99999999999998887762 3444444444432210000 000 000000
Q ss_pred hhhhh----hhccCC------CChHHHHHHhhhhhc-----------------------c-CCCCChhhHHhhhhccEEE
Q 024042 171 NLERI----DHLMLP------ESASQLRTLTGLAVS-----------------------K-NLDIVPDFFFNDFVHDVLI 216 (273)
Q Consensus 171 ~~~~~----~~~~~~------~~~~~~~~~~~~~~~-----------------------~-~~~~~~~~~~~~~~~p~l~ 216 (273)
..... .....+ ............... . ............+..|+++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li 238 (582)
T PRK05855 159 LRSWYIYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRERYTDVPVQL 238 (582)
T ss_pred hhhHHHHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCccCCccCceEE
Confidence 00000 000000 000000000000000 0 0000000001225669999
Q ss_pred EecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 217 VWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 217 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
++|++|.++|.+..+.+.+.. ++.++++++ +||+.+.++|+++.+.|.+|+.+
T Consensus 239 i~G~~D~~v~~~~~~~~~~~~-~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~ 291 (582)
T PRK05855 239 IVPTGDPYVRPALYDDLSRWV-PRLWRREIK-AGHWLPMSHPQVLAAAVAEFVDA 291 (582)
T ss_pred EEeCCCcccCHHHhccccccC-CcceEEEcc-CCCcchhhChhHHHHHHHHHHHh
Confidence 999999999999998888777 788888886 79999999999999999999975
No 48
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.94 E-value=4.7e-25 Score=170.25 Aligned_cols=235 Identities=15% Similarity=0.146 Sum_probs=152.4
Q ss_pred EecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhH-------------------------HHHHHhhcCC-Ce
Q 024042 30 IDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQW-------------------------RKQVQFFAPH-FN 83 (273)
Q Consensus 30 ~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~-------------------------~~~~~~l~~~-~~ 83 (273)
+...||.+|+++.+.+ ...+.+|+++||++.+....+ ..+++.|.+. |.
T Consensus 2 ~~~~~g~~l~~~~~~~-----~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~ 76 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIV-----KNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYS 76 (332)
T ss_pred ccCCCCCeEEEeeeec-----cCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCc
Confidence 3445899999888852 245679999999998872121 3568888776 99
Q ss_pred EEeecCCCCCCCCCCCc---c-ccHHHHHHHHHHHHHHhC------------------------CccEEEEEeccchHHH
Q 024042 84 VYVPDLIFFGHSTTRSI---Q-RTELFQAASLGKLLEKIG------------------------VERFSVVGTSYGGFVA 135 (273)
Q Consensus 84 v~~~d~~g~g~s~~~~~---~-~~~~~~~~~~~~~~~~~~------------------------~~~i~l~G~S~Gg~~a 135 (273)
|+++|+||||.|..... . .+.+++++|+..+++... ..+++++||||||.++
T Consensus 77 V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~ 156 (332)
T TIGR01607 77 VYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIA 156 (332)
T ss_pred EEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHH
Confidence 99999999999885422 1 367888888888887641 2479999999999999
Q ss_pred HHHHHhCCc--------ccceEEEecCCCCCCCcc-------h---HHHhhhhhhhhhhhcc-------CCCChHHHHHH
Q 024042 136 YHMARMWPE--------RVEKVVIASSGVNMKRGD-------N---EALVKRANLERIDHLM-------LPESASQLRTL 190 (273)
Q Consensus 136 ~~~a~~~~~--------~v~~~v~~~~~~~~~~~~-------~---~~~~~~~~~~~~~~~~-------~~~~~~~~~~~ 190 (273)
+.++.++++ .++++|+++|........ . ..+..... .+...+ ....+......
T Consensus 157 ~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~--~~~p~~~~~~~~~~~~~~~~~~~~ 234 (332)
T TIGR01607 157 LRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMS--RVFPTFRISKKIRYEKSPYVNDII 234 (332)
T ss_pred HHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHH--HHCCcccccCccccccChhhhhHH
Confidence 999876532 589999888875332100 0 01111000 000000 00001111111
Q ss_pred hhhhhccCCCCCh-------------hhHHhhh--hccEEEEecCCCCCCChHHHHHHHHHhc-CCcEEEEeCCCCCCcC
Q 024042 191 TGLAVSKNLDIVP-------------DFFFNDF--VHDVLIVWGDQDQIFPLKMATELKELLG-KKARLEIIENTSHVPQ 254 (273)
Q Consensus 191 ~~~~~~~~~~~~~-------------~~~~~~~--~~p~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~ 254 (273)
....+........ ......+ ..|+|+++|++|.+++.+.++.+++..+ ++++++++++++|..+
T Consensus 235 ~~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~ 314 (332)
T TIGR01607 235 KFDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVIT 314 (332)
T ss_pred hcCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCc
Confidence 1111000000000 0012223 3599999999999999999999887763 5789999999999988
Q ss_pred cCC-hhhHHHHHHHHhcc
Q 024042 255 IEN-PGLFNSIVKNFLRG 271 (273)
Q Consensus 255 ~~~-~~~~~~~i~~fl~~ 271 (273)
.|. ++++.+.+.+||+.
T Consensus 315 ~E~~~~~v~~~i~~wL~~ 332 (332)
T TIGR01607 315 IEPGNEEVLKKIIEWISN 332 (332)
T ss_pred cCCCHHHHHHHHHHHhhC
Confidence 874 68899999999863
No 49
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.94 E-value=1.9e-24 Score=168.67 Aligned_cols=235 Identities=16% Similarity=0.180 Sum_probs=157.3
Q ss_pred cceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHh------------HHHHH---HhhcCC-CeEEeecCCCCCCCCCC
Q 024042 35 ETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQ------------WRKQV---QFFAPH-FNVYVPDLIFFGHSTTR 98 (273)
Q Consensus 35 g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~------------~~~~~---~~l~~~-~~v~~~d~~g~g~s~~~ 98 (273)
..++.|..+|.. ...+.++||++|+++++.... |..++ ..|..+ |-||++|..|-+.|..+
T Consensus 40 ~~~~~Y~t~G~l---n~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p 116 (389)
T PRK06765 40 DVQMGYETYGTL---NRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDP 116 (389)
T ss_pred CceEEEEecccc---CCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCC
Confidence 456789999832 234568999999998865111 55554 245444 99999999987653211
Q ss_pred ---------------------CccccHHHHHHHHHHHHHHhCCccEE-EEEeccchHHHHHHHHhCCcccceEEEecCCC
Q 024042 99 ---------------------SIQRTELFQAASLGKLLEKIGVERFS-VVGTSYGGFVAYHMARMWPERVEKVVIASSGV 156 (273)
Q Consensus 99 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~i~-l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~ 156 (273)
.+.+++.++++++..++++++.+++. ++||||||++|+.++.++|++++++|++++..
T Consensus 117 ~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~ 196 (389)
T PRK06765 117 NVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNP 196 (389)
T ss_pred CCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCC
Confidence 12368999999999999999999986 99999999999999999999999999998765
Q ss_pred CCCCcchHHHhh----hh-hh--------------------------------hhhhhccCCC-----C-------hHHH
Q 024042 157 NMKRGDNEALVK----RA-NL--------------------------------ERIDHLMLPE-----S-------ASQL 187 (273)
Q Consensus 157 ~~~~~~~~~~~~----~~-~~--------------------------------~~~~~~~~~~-----~-------~~~~ 187 (273)
.........+.. .. .. ..+...+... . ....
T Consensus 197 ~~~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~ 276 (389)
T PRK06765 197 QNDAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSF 276 (389)
T ss_pred CCChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhH
Confidence 443221000000 00 00 0000000000 0 0000
Q ss_pred HHHhhhh---hccCC--------------------CCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhc---CCc
Q 024042 188 RTLTGLA---VSKNL--------------------DIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLG---KKA 241 (273)
Q Consensus 188 ~~~~~~~---~~~~~--------------------~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~---~~~ 241 (273)
..+.... +.... .......+.++..|+|+|+|+.|.++|++..+.+.+.++ +++
T Consensus 277 e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a 356 (389)
T PRK06765 277 EKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYA 356 (389)
T ss_pred HHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCe
Confidence 0110000 00000 001233445667799999999999999999999988883 368
Q ss_pred EEEEeCC-CCCCcCcCChhhHHHHHHHHhccc
Q 024042 242 RLEIIEN-TSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 242 ~~~~~~~-~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
+++++++ +||..++++|+++.+.|.+||+++
T Consensus 357 ~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~~ 388 (389)
T PRK06765 357 EVYEIESINGHMAGVFDIHLFEKKIYEFLNRK 388 (389)
T ss_pred EEEEECCCCCcchhhcCHHHHHHHHHHHHccc
Confidence 9999985 899999999999999999999864
No 50
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.93 E-value=3.4e-24 Score=157.18 Aligned_cols=220 Identities=16% Similarity=0.250 Sum_probs=153.9
Q ss_pred CCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC--CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhC----CccE
Q 024042 50 KTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH--FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIG----VERF 123 (273)
Q Consensus 50 ~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~----~~~i 123 (273)
.....|+++++||+-++. ..|+.+...|++. ..|+++|.|.||.|..... .+...+++|+..+++..+ ..++
T Consensus 48 ~~~~~Pp~i~lHGl~GS~-~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~-h~~~~ma~dv~~Fi~~v~~~~~~~~~ 125 (315)
T KOG2382|consen 48 NLERAPPAIILHGLLGSK-ENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITV-HNYEAMAEDVKLFIDGVGGSTRLDPV 125 (315)
T ss_pred ccCCCCceEEecccccCC-CCHHHHHHHhcccccCceEEEecccCCCCccccc-cCHHHHHHHHHHHHHHcccccccCCc
Confidence 356789999999999999 9999999999886 8999999999999985543 468889999999999884 4789
Q ss_pred EEEEeccch-HHHHHHHHhCCcccceEEEecCCCCCCCcc---hHHHhhhhhhhhhhhccCCC------------ChHHH
Q 024042 124 SVVGTSYGG-FVAYHMARMWPERVEKVVIASSGVNMKRGD---NEALVKRANLERIDHLMLPE------------SASQL 187 (273)
Q Consensus 124 ~l~G~S~Gg-~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~------------~~~~~ 187 (273)
+++|||||| .+++..+...|+.+..+|+++-........ ..................+. ....+
T Consensus 126 ~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~~~ 205 (315)
T KOG2382|consen 126 VLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGFDNLV 205 (315)
T ss_pred eecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHhcchHH
Confidence 999999999 788888888999999988876544211111 11111111100000000000 00000
Q ss_pred HHHhhhhhc-cCC-----------------------CCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEE
Q 024042 188 RTLTGLAVS-KNL-----------------------DIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARL 243 (273)
Q Consensus 188 ~~~~~~~~~-~~~-----------------------~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 243 (273)
..+....+. ... .+........+..||+++.|.++..++.+....+.+.+ +++++
T Consensus 206 ~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~~f-p~~e~ 284 (315)
T KOG2382|consen 206 RQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEKIF-PNVEV 284 (315)
T ss_pred HHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhHHHHHHHhc-cchhe
Confidence 011110110 000 00000000223349999999999999999999999999 99999
Q ss_pred EEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 244 EIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 244 ~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
+.++++||+.+.|+|+++.+.|.+|+.++
T Consensus 285 ~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 285 HELDEAGHWVHLEKPEEFIESISEFLEEP 313 (315)
T ss_pred eecccCCceeecCCHHHHHHHHHHHhccc
Confidence 99999999999999999999999999875
No 51
>PRK10985 putative hydrolase; Provisional
Probab=99.93 E-value=7.9e-24 Score=163.50 Aligned_cols=246 Identities=15% Similarity=0.132 Sum_probs=148.1
Q ss_pred CCCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhH-hHHHHHHhhcCC-CeEEeecCCCCCCCCCCCc
Q 024042 23 AGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIW-QWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSI 100 (273)
Q Consensus 23 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~-~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~ 100 (273)
.....+.++++||..+.+.....+ ....++|+||++||++++... ....++..|.+. |+|+++|+||+|.+.....
T Consensus 29 ~~~~~~~~~~~dg~~~~l~w~~~~--~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~ 106 (324)
T PRK10985 29 FTPYWQRLELPDGDFVDLAWSEDP--AQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLH 106 (324)
T ss_pred CCcceeEEECCCCCEEEEecCCCC--ccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCc
Confidence 345677899999988765543211 123457899999999876522 345577777776 9999999999997754322
Q ss_pred c-c---cHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcc--cceEEEecCCCCCCCcch---H---HHhh
Q 024042 101 Q-R---TELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPER--VEKVVIASSGVNMKRGDN---E---ALVK 168 (273)
Q Consensus 101 ~-~---~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~--v~~~v~~~~~~~~~~~~~---~---~~~~ 168 (273)
. + ..++....+..+.+.++..+++++||||||.+++.++.++++. +.++|+++++........ . .+..
T Consensus 107 ~~~~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~~~~~ 186 (324)
T PRK10985 107 RIYHSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFSRVYQ 186 (324)
T ss_pred ceECCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHHHHHH
Confidence 1 1 2233223333333445667899999999999888888776543 889999998765432110 0 0000
Q ss_pred h-----hh--hhh-hhhcc--CCCChHHHHH---------HhhhhhccCC-------CCChhhHHhhhhccEEEEecCCC
Q 024042 169 R-----AN--LER-IDHLM--LPESASQLRT---------LTGLAVSKNL-------DIVPDFFFNDFVHDVLIVWGDQD 222 (273)
Q Consensus 169 ~-----~~--~~~-~~~~~--~~~~~~~~~~---------~~~~~~~~~~-------~~~~~~~~~~~~~p~l~i~g~~D 222 (273)
. .. ... ..... .......+.. .......... .......+.++..|+++|+|++|
T Consensus 187 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~i~~P~lii~g~~D 266 (324)
T PRK10985 187 RYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQIRKPTLIIHAKDD 266 (324)
T ss_pred HHHHHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhCCCCCEEEEecCCC
Confidence 0 00 000 00000 0011111110 0000000000 01122345666779999999999
Q ss_pred CCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCCh-----hhHHHHHHHHhcc
Q 024042 223 QIFPLKMATELKELLGKKARLEIIENTSHVPQIENP-----GLFNSIVKNFLRG 271 (273)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~-----~~~~~~i~~fl~~ 271 (273)
++++.+..+.+.+.. ++.++++++++||+.+++.. ....+.+.+|++.
T Consensus 267 ~~~~~~~~~~~~~~~-~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~ 319 (324)
T PRK10985 267 PFMTHEVIPKPESLP-PNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTT 319 (324)
T ss_pred CCCChhhChHHHHhC-CCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHH
Confidence 999988887776666 88999999999999887642 2455667777754
No 52
>PRK10566 esterase; Provisional
Probab=99.93 E-value=2.7e-23 Score=155.37 Aligned_cols=205 Identities=17% Similarity=0.196 Sum_probs=126.5
Q ss_pred CCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccH-------HHHHHHHHHHHHH------
Q 024042 52 LKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTE-------LFQAASLGKLLEK------ 117 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~-------~~~~~~~~~~~~~------ 117 (273)
++.|+||++||++++. ..|..++..|.+. |.|+++|+||+|.+......... ....+++.++++.
T Consensus 25 ~~~p~vv~~HG~~~~~-~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 103 (249)
T PRK10566 25 TPLPTVFFYHGFTSSK-LVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGW 103 (249)
T ss_pred CCCCEEEEeCCCCccc-chHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4578999999999888 7888899999876 99999999999976432211111 1223333333333
Q ss_pred hCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhcc
Q 024042 118 IGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSK 197 (273)
Q Consensus 118 ~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (273)
++.++++++|||+||.+++.++.++|+....++++++... ....... .... ....+.............
T Consensus 104 ~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~------~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~--- 172 (249)
T PRK10566 104 LLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYF------TSLARTL-FPPL-IPETAAQQAEFNNIVAPL--- 172 (249)
T ss_pred cCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHH------HHHHHHh-cccc-cccccccHHHHHHHHHHH---
Confidence 2347899999999999999999988763333344332211 0000000 0000 000000111111111110
Q ss_pred CCCCChhhHHhhh-hccEEEEecCCCCCCChHHHHHHHHHhcC-----CcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 198 NLDIVPDFFFNDF-VHDVLIVWGDQDQIFPLKMATELKELLGK-----KARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 198 ~~~~~~~~~~~~~-~~p~l~i~g~~D~~~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
....+.....++ ..|+|+++|++|.++|.+.++.+.+.+.. +.+++.++++||... + ...+.+.+||++
T Consensus 173 -~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~---~-~~~~~~~~fl~~ 247 (249)
T PRK10566 173 -AEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT---P-EALDAGVAFFRQ 247 (249)
T ss_pred -hhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC---H-HHHHHHHHHHHh
Confidence 011122233444 46999999999999999999999988721 367788999999853 3 456888899987
Q ss_pred cC
Q 024042 272 SL 273 (273)
Q Consensus 272 ~l 273 (273)
+|
T Consensus 248 ~~ 249 (249)
T PRK10566 248 HL 249 (249)
T ss_pred hC
Confidence 65
No 53
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.93 E-value=1.5e-23 Score=158.02 Aligned_cols=233 Identities=15% Similarity=0.100 Sum_probs=140.5
Q ss_pred EEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCC----chhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCcccc
Q 024042 29 TIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGP----EAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRT 103 (273)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~----~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~ 103 (273)
.+.. +|.++..+... +.+.+++.||++||+.. +. ..+..+++.|++. |.|+++|+||||.|.... .+
T Consensus 6 ~~~~-~~~~l~g~~~~----p~~~~~~~vv~i~gg~~~~~g~~-~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~--~~ 77 (274)
T TIGR03100 6 TFSC-EGETLVGVLHI----PGASHTTGVLIVVGGPQYRVGSH-RQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN--LG 77 (274)
T ss_pred EEEc-CCcEEEEEEEc----CCCCCCCeEEEEeCCccccCCch-hHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC--CC
Confidence 3444 56666544433 11234567888887553 23 4567778888876 999999999999987543 35
Q ss_pred HHHHHHHHHHHHHHh-----CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhh-----h
Q 024042 104 ELFQAASLGKLLEKI-----GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANL-----E 173 (273)
Q Consensus 104 ~~~~~~~~~~~~~~~-----~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~-----~ 173 (273)
.....+|+.+.++.+ +.++++++|||+||.+++.++.. +.+++++|+++|.................. .
T Consensus 78 ~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~ 156 (274)
T TIGR03100 78 FEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQAASRIRHYYLGQLLSA 156 (274)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccchHHHHHHHHHHHHhCh
Confidence 555666777766665 45789999999999999999875 467999999998755332111111111100 0
Q ss_pred hh-hhccCCCC-hH-HHHHHhhhh--h--ccC-CCC--Chh---hHHhhhhccEEEEecCCCCCCChHHH------HHHH
Q 024042 174 RI-DHLMLPES-AS-QLRTLTGLA--V--SKN-LDI--VPD---FFFNDFVHDVLIVWGDQDQIFPLKMA------TELK 234 (273)
Q Consensus 174 ~~-~~~~~~~~-~~-~~~~~~~~~--~--~~~-~~~--~~~---~~~~~~~~p~l~i~g~~D~~~~~~~~------~~~~ 234 (273)
.. ........ .. ..+.+.... . ... ... ... ..+.++..|+++++|+.|...+ ... ..+.
T Consensus 157 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~ll~~g~~D~~~~-~~~~~~~~~~~~~ 235 (274)
T TIGR03100 157 DFWRKLLSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERFQGPVLFILSGNDLTAQ-EFADSVLGEPAWR 235 (274)
T ss_pred HHHHHhcCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhcCCcEEEEEcCcchhHH-HHHHHhccChhhH
Confidence 01 11111100 00 011111100 0 000 000 111 1233556699999999998863 222 4445
Q ss_pred HHhc-CCcEEEEeCCCCCCcCcC-ChhhHHHHHHHHhcc
Q 024042 235 ELLG-KKARLEIIENTSHVPQIE-NPGLFNSIVKNFLRG 271 (273)
Q Consensus 235 ~~~~-~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~ 271 (273)
+.+. +++++..+++++|+...+ .++++.+.|.+||++
T Consensus 236 ~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 236 GALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred HHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHhC
Confidence 5443 789999999999988555 558999999999964
No 54
>PRK11071 esterase YqiA; Provisional
Probab=99.92 E-value=3.6e-23 Score=146.78 Aligned_cols=180 Identities=17% Similarity=0.232 Sum_probs=123.5
Q ss_pred CeEEEEcCCCCchhHhHHH--HHHhhcC---CCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEec
Q 024042 55 PSLVLIHGFGPEAIWQWRK--QVQFFAP---HFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTS 129 (273)
Q Consensus 55 ~~vi~~hG~~~~~~~~~~~--~~~~l~~---~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S 129 (273)
|+||++||++++. ..|.. +.+.+.+ +|+|+++|+||++ ++.++++.++++.++.++++++|||
T Consensus 2 p~illlHGf~ss~-~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-----------~~~~~~l~~l~~~~~~~~~~lvG~S 69 (190)
T PRK11071 2 STLLYLHGFNSSP-RSAKATLLKNWLAQHHPDIEMIVPQLPPYP-----------ADAAELLESLVLEHGGDPLGLVGSS 69 (190)
T ss_pred CeEEEECCCCCCc-chHHHHHHHHHHHHhCCCCeEEeCCCCCCH-----------HHHHHHHHHHHHHcCCCCeEEEEEC
Confidence 6899999999998 77763 3455543 5999999999874 3577888999999988999999999
Q ss_pred cchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhcc---CCCChHHHHHHhhhhhccCCCCChhhH
Q 024042 130 YGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLM---LPESASQLRTLTGLAVSKNLDIVPDFF 206 (273)
Q Consensus 130 ~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (273)
+||.+|+.++.++|. .+|+++|+.... ..+....... ..... .......+...... ....
T Consensus 70 ~Gg~~a~~~a~~~~~---~~vl~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~~--------~~~~- 132 (190)
T PRK11071 70 LGGYYATWLSQCFML---PAVVVNPAVRPF----ELLTDYLGEN-ENPYTGQQYVLESRHIYDLKVM--------QIDP- 132 (190)
T ss_pred HHHHHHHHHHHHcCC---CEEEECCCCCHH----HHHHHhcCCc-ccccCCCcEEEcHHHHHHHHhc--------CCcc-
Confidence 999999999999883 468888865521 1111111100 00000 00011111111100 0011
Q ss_pred HhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhc
Q 024042 207 FNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 207 ~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
. +...|+++++|++|+++|.+.+.++++. ++.+.++|++|.+ .+.++..+.+.+|++
T Consensus 133 i-~~~~~v~iihg~~De~V~~~~a~~~~~~----~~~~~~~ggdH~f--~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 133 L-ESPDLIWLLQQTGDEVLDYRQAVAYYAA----CRQTVEEGGNHAF--VGFERYFNQIVDFLG 189 (190)
T ss_pred C-CChhhEEEEEeCCCCcCCHHHHHHHHHh----cceEEECCCCcch--hhHHHhHHHHHHHhc
Confidence 1 2444889999999999999999999874 4666889999986 445888899999975
No 55
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.91 E-value=1e-23 Score=144.15 Aligned_cols=221 Identities=17% Similarity=0.201 Sum_probs=153.5
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcC--CCeEEeecCCCCCCCCCCCcccc
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAP--HFNVYVPDLIFFGHSTTRSIQRT 103 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~--~~~v~~~d~~g~g~s~~~~~~~~ 103 (273)
+..++.+.|.++++.|..- .+.+.|+++++|+..++- ...-..++-+-. +.+|+.+++||+|.|.+.+....
T Consensus 55 e~i~l~T~D~vtL~a~~~~-----~E~S~pTlLyfh~NAGNm-Ghr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~G 128 (300)
T KOG4391|consen 55 ERIELRTRDKVTLDAYLML-----SESSRPTLLYFHANAGNM-GHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSEEG 128 (300)
T ss_pred eEEEEEcCcceeEeeeeec-----ccCCCceEEEEccCCCcc-cchhhHHHHHHHHcCceEEEEEeeccccCCCCccccc
Confidence 4556667799999876653 356899999999988877 444444443333 38999999999999998887665
Q ss_pred HHHHHHHHHHHHHHh---CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccC
Q 024042 104 ELFQAASLGKLLEKI---GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLML 180 (273)
Q Consensus 104 ~~~~~~~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (273)
..-.++.+.+.+-.- +..+++++|.|.||.+|..+|++..+++.++|+-+.....+.... ..+.
T Consensus 129 L~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i-------------~~v~ 195 (300)
T KOG4391|consen 129 LKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAI-------------PLVF 195 (300)
T ss_pred eeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhh-------------heec
Confidence 555555554444322 347899999999999999999999999999999988766532210 1111
Q ss_pred CCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhc-CCcEEEEeCCCCCCcCcCChh
Q 024042 181 PESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLG-KKARLEIIENTSHVPQIENPG 259 (273)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~ 259 (273)
+.....+..+.... .|.......+...|.|++.|.+|.++|+-..+.+++.++ ...++..+|++.|.-..- -+
T Consensus 196 p~~~k~i~~lc~kn-----~~~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i-~d 269 (300)
T KOG4391|consen 196 PFPMKYIPLLCYKN-----KWLSYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWI-CD 269 (300)
T ss_pred cchhhHHHHHHHHh-----hhcchhhhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEE-ec
Confidence 11111222221111 111112222444499999999999999999999999984 567899999999975433 23
Q ss_pred hHHHHHHHHhcc
Q 024042 260 LFNSIVKNFLRG 271 (273)
Q Consensus 260 ~~~~~i~~fl~~ 271 (273)
-..++|.+||.+
T Consensus 270 GYfq~i~dFlaE 281 (300)
T KOG4391|consen 270 GYFQAIEDFLAE 281 (300)
T ss_pred cHHHHHHHHHHH
Confidence 567888999875
No 56
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.91 E-value=3.5e-23 Score=146.53 Aligned_cols=213 Identities=17% Similarity=0.152 Sum_probs=149.8
Q ss_pred CCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcC--CCeEEeecCCCCCCCCCCCcc
Q 024042 24 GLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAP--HFNVYVPDLIFFGHSTTRSIQ 101 (273)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~--~~~v~~~d~~g~g~s~~~~~~ 101 (273)
..+-..+++..|..+...... +.....+++++.||...+. .....+...|+. +++++.+|++|+|.|.+.+..
T Consensus 34 ~v~v~~~~t~rgn~~~~~y~~----~~~~~~~~lly~hGNa~Dl-gq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE 108 (258)
T KOG1552|consen 34 FVEVFKVKTSRGNEIVCMYVR----PPEAAHPTLLYSHGNAADL-GQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSE 108 (258)
T ss_pred ccceEEeecCCCCEEEEEEEc----CccccceEEEEcCCcccch-HHHHHHHHHHhhcccceEEEEecccccccCCCccc
Confidence 344455566555554433332 2234568999999987766 444455556655 499999999999999998887
Q ss_pred ccHHHHHHHHHHHHHHhC--CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhcc
Q 024042 102 RTELFQAASLGKLLEKIG--VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLM 179 (273)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~--~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (273)
....+.++.+.+.++.-. .++++|+|+|+|+..++.+|.+.| +.++|+.+|.........
T Consensus 109 ~n~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv~~---------------- 170 (258)
T KOG1552|consen 109 RNLYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMRVAF---------------- 170 (258)
T ss_pred ccchhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhhhhc----------------
Confidence 777766777777666543 588999999999999999999988 999999998655322100
Q ss_pred CCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChh
Q 024042 180 LPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPG 259 (273)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 259 (273)
+. .... +....+....-.+.+.+|+|++||++|++++....+++.+..+...+-.++.|+||....-.|
T Consensus 171 -~~--------~~~~-~~~d~f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~~~~~- 239 (258)
T KOG1552|consen 171 -PD--------TKTT-YCFDAFPNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDIELYP- 239 (258)
T ss_pred -cC--------cceE-EeeccccccCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCcccccCH-
Confidence 00 0000 000000113334566669999999999999999999999999555688889999998755444
Q ss_pred hHHHHHHHHhc
Q 024042 260 LFNSIVKNFLR 270 (273)
Q Consensus 260 ~~~~~i~~fl~ 270 (273)
++.+.+.+|+.
T Consensus 240 ~yi~~l~~f~~ 250 (258)
T KOG1552|consen 240 EYIEHLRRFIS 250 (258)
T ss_pred HHHHHHHHHHH
Confidence 56677777775
No 57
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.91 E-value=1.5e-22 Score=168.11 Aligned_cols=238 Identities=21% Similarity=0.225 Sum_probs=159.3
Q ss_pred CCCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch-hHhHHHHHHhhcCC-CeEEeecCCCCCCCC---C
Q 024042 23 AGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA-IWQWRKQVQFFAPH-FNVYVPDLIFFGHST---T 97 (273)
Q Consensus 23 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~-~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~---~ 97 (273)
...+..++...||.++++|...|.+..+.++-|+||++||.+... ...+....+.|+.. |.|+.+|+||.+.-. .
T Consensus 363 ~~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~ 442 (620)
T COG1506 363 AEPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFA 442 (620)
T ss_pred CCceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHH
Confidence 344666777779999999999866555445569999999986444 12355566667666 999999999754321 1
Q ss_pred -----CCccccHHHHHHHHHHHHHHhC---CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhh
Q 024042 98 -----RSIQRTELFQAASLGKLLEKIG---VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKR 169 (273)
Q Consensus 98 -----~~~~~~~~~~~~~~~~~~~~~~---~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~ 169 (273)
.......++..+.+. +++..+ .+++.++|||+||.+++.++.+.+ .+++.+...+...........-...
T Consensus 443 ~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~~~~~~~~ 520 (620)
T COG1506 443 DAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYFGESTEGL 520 (620)
T ss_pred HhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhccccchhh
Confidence 122235555555555 454443 368999999999999999999987 6888887777555332111000000
Q ss_pred hhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEe
Q 024042 170 ANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEII 246 (273)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~ 246 (273)
... .......... .... .....|.....++.+|+|+|||++|..||.+++..+.+.+ +.+++++++
T Consensus 521 ~~~--~~~~~~~~~~-~~~~--------~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~ 589 (620)
T COG1506 521 RFD--PEENGGGPPE-DREK--------YEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVF 589 (620)
T ss_pred cCC--HHHhCCCccc-ChHH--------HHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEe
Confidence 000 0000000000 0000 1133677778888889999999999999999999998887 467899999
Q ss_pred CCCCCCcCc-CChhhHHHHHHHHhcccC
Q 024042 247 ENTSHVPQI-ENPGLFNSIVKNFLRGSL 273 (273)
Q Consensus 247 ~~~gH~~~~-~~~~~~~~~i~~fl~~~l 273 (273)
|+.+|.+.. ++...+.+.+.+|+++++
T Consensus 590 p~e~H~~~~~~~~~~~~~~~~~~~~~~~ 617 (620)
T COG1506 590 PDEGHGFSRPENRVKVLKEILDWFKRHL 617 (620)
T ss_pred CCCCcCCCCchhHHHHHHHHHHHHHHHh
Confidence 999998655 556678888889988764
No 58
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.91 E-value=3.2e-22 Score=156.32 Aligned_cols=240 Identities=14% Similarity=0.218 Sum_probs=146.8
Q ss_pred CCceeEEecC-CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHh-----HHHHHHhhcCC-CeEEeecCCCCCCCC
Q 024042 24 GLSSQTIDID-DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQ-----WRKQVQFFAPH-FNVYVPDLIFFGHST 96 (273)
Q Consensus 24 ~~~~~~~~~~-~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~-----~~~~~~~l~~~-~~v~~~d~~g~g~s~ 96 (273)
+.++..+... ++..++.+... .....+++||++||+..+. .. ++.+++.|.+. |+|+++|++|+|.+.
T Consensus 35 ~~~~~~~v~~~~~~~l~~~~~~----~~~~~~~pvl~v~~~~~~~-~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~ 109 (350)
T TIGR01836 35 GVTPKEVVYREDKVVLYRYTPV----KDNTHKTPLLIVYALVNRP-YMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRAD 109 (350)
T ss_pred CCCCCceEEEcCcEEEEEecCC----CCcCCCCcEEEeccccccc-eeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHH
Confidence 4445555443 44455444321 1123456799999975444 33 35788888776 999999999998775
Q ss_pred CCCccccHHHH-----HHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchH--HHh--
Q 024042 97 TRSIQRTELFQ-----AASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNE--ALV-- 167 (273)
Q Consensus 97 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~--~~~-- 167 (273)
... +.+++ .+.+..+.+..+.++++++||||||.+++.++..+|++++++|+++++......... ...
T Consensus 110 ~~~---~~~d~~~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~ 186 (350)
T TIGR01836 110 RYL---TLDDYINGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARH 186 (350)
T ss_pred hcC---CHHHHHHHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccc
Confidence 332 33333 333445555567789999999999999999999999999999999988765432100 000
Q ss_pred -------hhhh-h-----hhhhhccCC---------------CChHH---------------------HHHHhhhhhccC
Q 024042 168 -------KRAN-L-----ERIDHLMLP---------------ESASQ---------------------LRTLTGLAVSKN 198 (273)
Q Consensus 168 -------~~~~-~-----~~~~~~~~~---------------~~~~~---------------------~~~~~~~~~~~~ 198 (273)
.... . ......+.+ ..... ........+...
T Consensus 187 ~~~~~~~~~~~~~p~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n 266 (350)
T TIGR01836 187 VDIDLAVDTMGNIPGELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQN 266 (350)
T ss_pred cCHHHHHHhcCCCCHHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcC
Confidence 0000 0 000000000 00100 011111110000
Q ss_pred CCCC-------hhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhc-CCcEEEEeCCCCCCcCcCC---hhhHHHHHHH
Q 024042 199 LDIV-------PDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLG-KKARLEIIENTSHVPQIEN---PGLFNSIVKN 267 (273)
Q Consensus 199 ~~~~-------~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~---~~~~~~~i~~ 267 (273)
.... ....+.++.+|+++++|++|.++|++.++.+.+.++ .+.++++++ +||...+.+ ++++.+.|.+
T Consensus 267 ~l~~g~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~ 345 (350)
T TIGR01836 267 GLINGEVEIGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGK 345 (350)
T ss_pred cccCCeeEECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHH
Confidence 0000 011244567799999999999999999999999883 356777787 799866543 4789999999
Q ss_pred Hhccc
Q 024042 268 FLRGS 272 (273)
Q Consensus 268 fl~~~ 272 (273)
||+++
T Consensus 346 wl~~~ 350 (350)
T TIGR01836 346 WLQAR 350 (350)
T ss_pred HHHhC
Confidence 99764
No 59
>PLN02872 triacylglycerol lipase
Probab=99.91 E-value=3.7e-22 Score=155.93 Aligned_cols=249 Identities=17% Similarity=0.168 Sum_probs=156.8
Q ss_pred hCCCceeEEecCCcceEEeecCCccCC-CCCCCCCeEEEEcCCCCchhHhHH------HHHHhhcCC-CeEEeecCCCCC
Q 024042 22 SAGLSSQTIDIDDETTLHFWGPKLEDD-HKTLKKPSLVLIHGFGPEAIWQWR------KQVQFFAPH-FNVYVPDLIFFG 93 (273)
Q Consensus 22 ~~~~~~~~~~~~~g~~l~~~~~~~~~~-~~~~~~~~vi~~hG~~~~~~~~~~------~~~~~l~~~-~~v~~~d~~g~g 93 (273)
....+.+.++++||..|.....+.... ....++|+|+++||++.++ ..|. .++..|++. |+|+++|+||++
T Consensus 41 gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss-~~w~~~~~~~sla~~La~~GydV~l~n~RG~~ 119 (395)
T PLN02872 41 GYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAG-DAWFLNSPEQSLGFILADHGFDVWVGNVRGTR 119 (395)
T ss_pred CCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccc-cceeecCcccchHHHHHhCCCCcccccccccc
Confidence 445688899999999999887642211 1123468999999998777 6663 344556665 999999999987
Q ss_pred CCCCC------Cc---cccHHHHH-HHHHHHHHHh---CCccEEEEEeccchHHHHHHHHhCCc---ccceEEEecCCCC
Q 024042 94 HSTTR------SI---QRTELFQA-ASLGKLLEKI---GVERFSVVGTSYGGFVAYHMARMWPE---RVEKVVIASSGVN 157 (273)
Q Consensus 94 ~s~~~------~~---~~~~~~~~-~~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~~~~---~v~~~v~~~~~~~ 157 (273)
.|.+. .. ..+.++.+ .|+.++++.+ ..++++++|||+||.+++.++ .+|+ +++.+++++|...
T Consensus 120 ~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~ 198 (395)
T PLN02872 120 WSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISY 198 (395)
T ss_pred cccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhh
Confidence 65321 11 24566666 6888888876 347899999999999998555 4565 5888888888764
Q ss_pred CCCcchHHH---hh-----h---hhh----------hhhhh--------------ccC--------------------CC
Q 024042 158 MKRGDNEAL---VK-----R---ANL----------ERIDH--------------LML--------------------PE 182 (273)
Q Consensus 158 ~~~~~~~~~---~~-----~---~~~----------~~~~~--------------~~~--------------------~~ 182 (273)
......... .. . .+. ..+.. .+. ..
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~~~~pagt 278 (395)
T PLN02872 199 LDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYLEYEPHPS 278 (395)
T ss_pred hccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHHhcCCCcc
Confidence 422111000 00 0 000 00000 000 00
Q ss_pred ChHHHHHHhhh---hhccC-------------CCCChhhHHhhh--hccEEEEecCCCCCCChHHHHHHHHHhcCCcEEE
Q 024042 183 SASQLRTLTGL---AVSKN-------------LDIVPDFFFNDF--VHDVLIVWGDQDQIFPLKMATELKELLGKKARLE 244 (273)
Q Consensus 183 ~~~~~~~~~~~---~~~~~-------------~~~~~~~~~~~~--~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~ 244 (273)
+...+.-+.+. ..+.. ....|.+.+.++ ..|+++++|++|.+++++.++.+.+.++...+++
T Consensus 279 S~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~~~l~ 358 (395)
T PLN02872 279 SVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPSKPELL 358 (395)
T ss_pred hHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCCccEEE
Confidence 00000000000 00000 011233334444 2499999999999999999999999983336888
Q ss_pred EeCCCCCC---cCcCChhhHHHHHHHHhccc
Q 024042 245 IIENTSHV---PQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 245 ~~~~~gH~---~~~~~~~~~~~~i~~fl~~~ 272 (273)
.+++.+|. ...+.|+++.+.|.+|+++.
T Consensus 359 ~l~~~gH~dfi~~~eape~V~~~Il~fL~~~ 389 (395)
T PLN02872 359 YLENYGHIDFLLSTSAKEDVYNHMIQFFRSL 389 (395)
T ss_pred EcCCCCCHHHHhCcchHHHHHHHHHHHHHHh
Confidence 99999995 34578999999999999764
No 60
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.89 E-value=3.9e-22 Score=141.74 Aligned_cols=123 Identities=20% Similarity=0.295 Sum_probs=98.1
Q ss_pred ceeEEecCCcc-eEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC--CeEEeecCCCCCCCCCCCc-c
Q 024042 26 SSQTIDIDDET-TLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH--FNVYVPDLIFFGHSTTRSI-Q 101 (273)
Q Consensus 26 ~~~~~~~~~g~-~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~g~g~s~~~~~-~ 101 (273)
+...+.++++. ++..|... ++....|.+++.||+|.+. ..|..++..+... .+|+++|+||||++..... +
T Consensus 49 ekedv~i~~~~~t~n~Y~t~----~~~t~gpil~l~HG~G~S~-LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~d 123 (343)
T KOG2564|consen 49 EKEDVSIDGSDLTFNVYLTL----PSATEGPILLLLHGGGSSA-LSFAIFASELKSKIRCRCLALDLRGHGETKVENEDD 123 (343)
T ss_pred cccccccCCCcceEEEEEec----CCCCCccEEEEeecCcccc-hhHHHHHHHHHhhcceeEEEeeccccCccccCChhh
Confidence 34566774333 56666655 3467889999999999998 9999999988776 7889999999999986554 4
Q ss_pred ccHHHHHHHHHHHHHHh---CCccEEEEEeccchHHHHHHHHh--CCcccceEEEecC
Q 024042 102 RTELFQAASLGKLLEKI---GVERFSVVGTSYGGFVAYHMARM--WPERVEKVVIASS 154 (273)
Q Consensus 102 ~~~~~~~~~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~--~~~~v~~~v~~~~ 154 (273)
.+.+.++.|+.++++.+ ...+|+|+||||||.+|...|.. .|. +.++++++-
T Consensus 124 lS~eT~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDV 180 (343)
T KOG2564|consen 124 LSLETMSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDV 180 (343)
T ss_pred cCHHHHHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEE
Confidence 58899999999999887 23679999999999999887764 355 888888774
No 61
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.89 E-value=6.5e-22 Score=135.62 Aligned_cols=142 Identities=24% Similarity=0.312 Sum_probs=110.0
Q ss_pred eEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHH-H-HhCCccEEEEEeccch
Q 024042 56 SLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLL-E-KIGVERFSVVGTSYGG 132 (273)
Q Consensus 56 ~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~-~-~~~~~~i~l~G~S~Gg 132 (273)
+||++||++++. ..|..+.+.|.+. |.|+.+|+|++|.+.... ..+++.+.+ + ..+.++++++|||+||
T Consensus 1 ~vv~~HG~~~~~-~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~i~l~G~S~Gg 72 (145)
T PF12695_consen 1 VVVLLHGWGGSR-RDYQPLAEALAEQGYAVVAFDYPGHGDSDGAD-------AVERVLADIRAGYPDPDRIILIGHSMGG 72 (145)
T ss_dssp EEEEECTTTTTT-HHHHHHHHHHHHTTEEEEEESCTTSTTSHHSH-------HHHHHHHHHHHHHCTCCEEEEEEETHHH
T ss_pred CEEEECCCCCCH-HHHHHHHHHHHHCCCEEEEEecCCCCccchhH-------HHHHHHHHHHhhcCCCCcEEEEEEccCc
Confidence 589999999998 8899999999887 999999999999872111 222222222 2 2366899999999999
Q ss_pred HHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhc
Q 024042 133 FVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVH 212 (273)
Q Consensus 133 ~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (273)
.+++.++.+. .+++++|++++... .....+...
T Consensus 73 ~~a~~~~~~~-~~v~~~v~~~~~~~----------------------------------------------~~~~~~~~~ 105 (145)
T PF12695_consen 73 AIAANLAARN-PRVKAVVLLSPYPD----------------------------------------------SEDLAKIRI 105 (145)
T ss_dssp HHHHHHHHHS-TTESEEEEESESSG----------------------------------------------CHHHTTTTS
T ss_pred HHHHHHhhhc-cceeEEEEecCccc----------------------------------------------hhhhhccCC
Confidence 9999999988 67999999998200 001112222
Q ss_pred cEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCC
Q 024042 213 DVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHV 252 (273)
Q Consensus 213 p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 252 (273)
|+++++|++|..++.+..+.+.+.++.+.+++++++++|+
T Consensus 106 pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 106 PVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp EEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred cEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 9999999999999999999999999557999999999996
No 62
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.89 E-value=5.7e-23 Score=151.94 Aligned_cols=184 Identities=27% Similarity=0.367 Sum_probs=126.1
Q ss_pred CeEEeecCCCCCCCCC----CCccccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCC-
Q 024042 82 FNVYVPDLIFFGHSTT----RSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGV- 156 (273)
Q Consensus 82 ~~v~~~d~~g~g~s~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~- 156 (273)
|+|+++|+||+|.|++ ....++.++.++++..+++.++.++++++||||||.+++.++..+|++|+++|+++++.
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~~ 80 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPPD 80 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSH
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeecc
Confidence 6899999999999994 34567999999999999999999999999999999999999999999999999999862
Q ss_pred ---CCCCcchHH--Hhhhhh---h-----------hhhh-------hccCCCChHH--HHHHhh--------hhh----c
Q 024042 157 ---NMKRGDNEA--LVKRAN---L-----------ERID-------HLMLPESASQ--LRTLTG--------LAV----S 196 (273)
Q Consensus 157 ---~~~~~~~~~--~~~~~~---~-----------~~~~-------~~~~~~~~~~--~~~~~~--------~~~----~ 196 (273)
......... ...... . .... .......... ...... ... .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (230)
T PF00561_consen 81 LPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNMFWNALG 160 (230)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred chhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhhcccccc
Confidence 000000000 000000 0 0000 0000000000 000000 000 0
Q ss_pred cCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHH
Q 024042 197 KNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVK 266 (273)
Q Consensus 197 ~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~ 266 (273)
....+.......++..|+++++|++|.++|.+....+.+.+ ++.++++++++||+.+.++|+++.+.|.
T Consensus 161 ~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~-~~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 161 YFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLI-PNSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHS-TTEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred ccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhc-CCCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 00011112233456669999999999999999999999888 9999999999999999999999988875
No 63
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.87 E-value=8e-21 Score=138.48 Aligned_cols=190 Identities=21% Similarity=0.234 Sum_probs=119.2
Q ss_pred HHHHHHhhcCC-CeEEeecCCCCCCCCCC--------CccccHHHHHHHHHHHHHHh--CCccEEEEEeccchHHHHHHH
Q 024042 71 WRKQVQFFAPH-FNVYVPDLIFFGHSTTR--------SIQRTELFQAASLGKLLEKI--GVERFSVVGTSYGGFVAYHMA 139 (273)
Q Consensus 71 ~~~~~~~l~~~-~~v~~~d~~g~g~s~~~--------~~~~~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a 139 (273)
|......|++. |.|+.+|+||.+..... ......++..+.+..+++.. +.+++.++|+|+||++++.++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 34456677555 99999999987743211 11123333333333333332 448999999999999999999
Q ss_pred HhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCC-CChHHHHHHhhhhhccCCCCChhhHHhh--hhccEEE
Q 024042 140 RMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLP-ESASQLRTLTGLAVSKNLDIVPDFFFND--FVHDVLI 216 (273)
Q Consensus 140 ~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~l~ 216 (273)
.++|+++++++..++..+........-. ...........+ ........... .....+ ...|+|+
T Consensus 83 ~~~~~~f~a~v~~~g~~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~s~-----------~~~~~~~~~~~P~li 149 (213)
T PF00326_consen 83 TQHPDRFKAAVAGAGVSDLFSYYGTTDI--YTKAEYLEYGDPWDNPEFYRELSP-----------ISPADNVQIKPPVLI 149 (213)
T ss_dssp HHTCCGSSEEEEESE-SSTTCSBHHTCC--HHHGHHHHHSSTTTSHHHHHHHHH-----------GGGGGGCGGGSEEEE
T ss_pred cccceeeeeeeccceecchhcccccccc--cccccccccCccchhhhhhhhhcc-----------ccccccccCCCCEEE
Confidence 9999999999999988776544322100 110011111111 12222222211 112222 5569999
Q ss_pred EecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCCCCCcC-cCChhhHHHHHHHHhcccC
Q 024042 217 VWGDQDQIFPLKMATELKELL---GKKARLEIIENTSHVPQ-IENPGLFNSIVKNFLRGSL 273 (273)
Q Consensus 217 i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~-~~~~~~~~~~i~~fl~~~l 273 (273)
++|++|..||.+.+..+.+.+ +.+.+++++|++||.+. .++..++.+.+.+||+++|
T Consensus 150 ~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l 210 (213)
T PF00326_consen 150 IHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYL 210 (213)
T ss_dssp EEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHT
T ss_pred EccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHc
Confidence 999999999999999988887 45699999999999644 3445578888899998764
No 64
>PRK11460 putative hydrolase; Provisional
Probab=99.87 E-value=2e-20 Score=137.28 Aligned_cols=173 Identities=18% Similarity=0.219 Sum_probs=113.2
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCC-----------Cccc---cHHHHHHHHHHHH
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTR-----------SIQR---TELFQAASLGKLL 115 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~-----------~~~~---~~~~~~~~~~~~~ 115 (273)
.+..|+||++||+|++. ..|..+.+.|.+. +.+..++.+|...+... .... ......+.+.+.+
T Consensus 13 ~~~~~~vIlLHG~G~~~-~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i 91 (232)
T PRK11460 13 KPAQQLLLLFHGVGDNP-VAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETV 91 (232)
T ss_pred CCCCcEEEEEeCCCCCh-HHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHH
Confidence 45678999999999999 8899999988765 44555555554321100 0001 1122222333333
Q ss_pred H----HhCC--ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHH
Q 024042 116 E----KIGV--ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRT 189 (273)
Q Consensus 116 ~----~~~~--~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (273)
+ ..+. ++++++|+|+||.+++.++.++|+.+.+++.+++..... +..
T Consensus 92 ~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~~---------------------~~~------ 144 (232)
T PRK11460 92 RYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYASL---------------------PET------ 144 (232)
T ss_pred HHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccccc---------------------ccc------
Confidence 3 3333 689999999999999999999888778777776532100 000
Q ss_pred HhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCCCCCcCcCChhhHHHHHH
Q 024042 190 LTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENTSHVPQIENPGLFNSIVK 266 (273)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~~~~~~~~~~i~ 266 (273)
.....|++++||++|.++|.+.++.+.+.+ +.+++++.++++||.+..+.-+.+.+.+.
T Consensus 145 ------------------~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~ 206 (232)
T PRK11460 145 ------------------APTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLR 206 (232)
T ss_pred ------------------ccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHH
Confidence 001239999999999999999998888877 34678899999999985443344444444
Q ss_pred HHh
Q 024042 267 NFL 269 (273)
Q Consensus 267 ~fl 269 (273)
++|
T Consensus 207 ~~l 209 (232)
T PRK11460 207 YTV 209 (232)
T ss_pred HHc
Confidence 443
No 65
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.86 E-value=3.9e-20 Score=130.33 Aligned_cols=214 Identities=13% Similarity=0.091 Sum_probs=149.0
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHH-HhCCccEEEEEec
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLE-KIGVERFSVVGTS 129 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~l~G~S 129 (273)
...++.++++|-.|+++ ..|+.+...|.....++++++||+|.....+...+++..++.+...+. -..-+++.++|||
T Consensus 4 ~~~~~~L~cfP~AGGsa-~~fr~W~~~lp~~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~~~~d~P~alfGHS 82 (244)
T COG3208 4 PGARLRLFCFPHAGGSA-SLFRSWSRRLPADIELLAVQLPGRGDRFGEPLLTDIESLADELANELLPPLLDAPFALFGHS 82 (244)
T ss_pred CCCCceEEEecCCCCCH-HHHHHHHhhCCchhheeeecCCCcccccCCcccccHHHHHHHHHHHhccccCCCCeeecccc
Confidence 45677899999989998 899999999988899999999999998888888899999999988887 3444789999999
Q ss_pred cchHHHHHHHHhCCc---ccceEEEecCCCCCCCc-------chHHHhhhhh-hhhhhhccCCCChHHH---HHHhhhhh
Q 024042 130 YGGFVAYHMARMWPE---RVEKVVIASSGVNMKRG-------DNEALVKRAN-LERIDHLMLPESASQL---RTLTGLAV 195 (273)
Q Consensus 130 ~Gg~~a~~~a~~~~~---~v~~~v~~~~~~~~~~~-------~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~ 195 (273)
|||++|.++|.+... .+.++.+.+...+.... ....+..... .......+. .+++.. ....+..+
T Consensus 83 mGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~l-ed~El~~l~LPilRAD~ 161 (244)
T COG3208 83 MGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPELL-EDPELMALFLPILRADF 161 (244)
T ss_pred hhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHHh-cCHHHHHHHHHHHHHHH
Confidence 999999999987522 25666666554431111 1112211111 101110000 111111 11111111
Q ss_pred ccC--CCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhc
Q 024042 196 SKN--LDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 196 ~~~--~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
.-. ....+ ...+.+|+.++.|++|..+..+....|.+..+...++..++ +||++..++.+++.+.|.+.+.
T Consensus 162 ~~~e~Y~~~~---~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fd-GgHFfl~~~~~~v~~~i~~~l~ 234 (244)
T COG3208 162 RALESYRYPP---PAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFD-GGHFFLNQQREEVLARLEQHLA 234 (244)
T ss_pred HHhcccccCC---CCCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEec-CcceehhhhHHHHHHHHHHHhh
Confidence 000 00001 13455699999999999999999999999997799999998 7999999999999999988874
No 66
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.86 E-value=1.6e-19 Score=145.11 Aligned_cols=206 Identities=15% Similarity=0.120 Sum_probs=131.9
Q ss_pred CCCCeEEEEcCCCCchhHhHH-----HHHHhhcCC-CeEEeecCCCCCCCCCCC--ccccHHHHHHHHHHHHHHhCCccE
Q 024042 52 LKKPSLVLIHGFGPEAIWQWR-----KQVQFFAPH-FNVYVPDLIFFGHSTTRS--IQRTELFQAASLGKLLEKIGVERF 123 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~~~~~~-----~~~~~l~~~-~~v~~~d~~g~g~s~~~~--~~~~~~~~~~~~~~~~~~~~~~~i 123 (273)
..+++||++||+.... ..+. .+++.|.++ |+|+++|++|+|.+.... .++..+...+.+..+++..+.+++
T Consensus 186 ~~~~PlLiVp~~i~k~-yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~~kv 264 (532)
T TIGR01838 186 VHKTPLLIVPPWINKY-YILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGEKQV 264 (532)
T ss_pred CCCCcEEEECcccccc-eeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCCCCe
Confidence 3578999999987666 5553 678888766 999999999999886432 233444556667777777888999
Q ss_pred EEEEeccchHHHH----HHHHhC-CcccceEEEecCCCCCCCcchHHH-h---------hhhhh---------hhhhhcc
Q 024042 124 SVVGTSYGGFVAY----HMARMW-PERVEKVVIASSGVNMKRGDNEAL-V---------KRANL---------ERIDHLM 179 (273)
Q Consensus 124 ~l~G~S~Gg~~a~----~~a~~~-~~~v~~~v~~~~~~~~~~~~~~~~-~---------~~~~~---------~~~~~~~ 179 (273)
+++|||+||.++. .++... ++++++++++++..++........ . ..... ......+
T Consensus 265 ~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~l 344 (532)
T TIGR01838 265 NCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSLL 344 (532)
T ss_pred EEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHhc
Confidence 9999999999852 244454 778999999998877654321100 0 00000 0000000
Q ss_pred CCC---------------C-----------------hHHHHHHhhhhhccCCCC-------ChhhHHhhhhccEEEEecC
Q 024042 180 LPE---------------S-----------------ASQLRTLTGLAVSKNLDI-------VPDFFFNDFVHDVLIVWGD 220 (273)
Q Consensus 180 ~~~---------------~-----------------~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~p~l~i~g~ 220 (273)
.+. . ......++...+..+... .....+.++..|++++.|+
T Consensus 345 rp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL~~I~vPvLvV~G~ 424 (532)
T TIGR01838 345 RENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLDLSKVKVPVYIIATR 424 (532)
T ss_pred ChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecchhhCCCCEEEEeeC
Confidence 000 0 000111111111111000 0111233444599999999
Q ss_pred CCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChh
Q 024042 221 QDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPG 259 (273)
Q Consensus 221 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 259 (273)
+|.++|.+.++.+.+.+ ++.+..+++++||..++++|.
T Consensus 425 ~D~IvP~~sa~~l~~~i-~~~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 425 EDHIAPWQSAYRGAALL-GGPKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred CCCcCCHHHHHHHHHHC-CCCEEEEECCCCCchHhhCCC
Confidence 99999999999999998 688888999999998877663
No 67
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.85 E-value=3.2e-20 Score=127.01 Aligned_cols=215 Identities=22% Similarity=0.224 Sum_probs=140.1
Q ss_pred CCCCCeEEEEcCCCCchhHh-HHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCC-cc--EEE
Q 024042 51 TLKKPSLVLIHGFGPEAIWQ-WRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGV-ER--FSV 125 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~-~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~--i~l 125 (273)
.++...+|++||+-++.... ...++..|.+. +.++.+|++|.|.|............++|+..+++++.. .+ -++
T Consensus 30 tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~nr~v~vi 109 (269)
T KOG4667|consen 30 TGSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNSNRVVPVI 109 (269)
T ss_pred cCCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccCceEEEEE
Confidence 35677999999998877333 44567788777 999999999999999776655666667999999998843 33 368
Q ss_pred EEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccC--CC----ChHHHHHHhhhhhccCC
Q 024042 126 VGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLML--PE----SASQLRTLTGLAVSKNL 199 (273)
Q Consensus 126 ~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~ 199 (273)
+|||-||.+++.++.++.+ +.-+|.+++-.+........+....-.......+. +. ....+... ....+-..
T Consensus 110 ~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~eRlg~~~l~~ike~Gfid~~~rkG~y~~rvt~e-SlmdrLnt 187 (269)
T KOG4667|consen 110 LGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGINERLGEDYLERIKEQGFIDVGPRKGKYGYRVTEE-SLMDRLNT 187 (269)
T ss_pred EeecCccHHHHHHHHhhcC-chheEEcccccchhcchhhhhcccHHHHHHhCCceecCcccCCcCceecHH-HHHHHHhc
Confidence 9999999999999999987 88888887766654332111111110000000000 00 00000000 00000001
Q ss_pred CCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHh
Q 024042 200 DIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFL 269 (273)
Q Consensus 200 ~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 269 (273)
+..+....-+..+|||-+||..|.+||.+.+..+++.+ ++.++.++||++|.....+ .+.......|.
T Consensus 188 d~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i-~nH~L~iIEgADHnyt~~q-~~l~~lgl~f~ 255 (269)
T KOG4667|consen 188 DIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKII-PNHKLEIIEGADHNYTGHQ-SQLVSLGLEFI 255 (269)
T ss_pred hhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhc-cCCceEEecCCCcCccchh-hhHhhhcceeE
Confidence 11222223344569999999999999999999999999 8899999999999865432 23334444443
No 68
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.85 E-value=3.4e-19 Score=134.56 Aligned_cols=226 Identities=26% Similarity=0.384 Sum_probs=144.7
Q ss_pred CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcC---CCeEEeecCCCCCCCCCCCccccHHHHHHH
Q 024042 34 DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAP---HFNVYVPDLIFFGHSTTRSIQRTELFQAAS 110 (273)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~---~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~ 110 (273)
.+..+.|...+ .. .|+++++||++++. ..|......+.. .|+++.+|+||||.|. .. .......+++
T Consensus 8 ~~~~~~~~~~~------~~-~~~i~~~hg~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~-~~~~~~~~~~ 77 (282)
T COG0596 8 DGVRLAYREAG------GG-GPPLVLLHGFPGSS-SVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA-GYSLSAYADD 77 (282)
T ss_pred CCeEEEEeecC------CC-CCeEEEeCCCCCch-hhhHHHHHHhhccccceEEEEecccCCCCCC-cc-cccHHHHHHH
Confidence 44556666664 11 56999999999888 777763222222 2899999999999997 22 2344444899
Q ss_pred HHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCC-----------CCcchHHHhh---hh---hhh
Q 024042 111 LGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNM-----------KRGDNEALVK---RA---NLE 173 (273)
Q Consensus 111 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~-----------~~~~~~~~~~---~~---~~~ 173 (273)
+..+++.++..+++++|||+||.++..++.++|+++++++++++.... .......... .. ...
T Consensus 78 ~~~~~~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (282)
T COG0596 78 LAALLDALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAFA 157 (282)
T ss_pred HHHHHHHhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhhhh
Confidence 999999999888999999999999999999999999999999976541 1000000000 00 000
Q ss_pred hh------hhcc--------CCC----ChHHHHHHhhhh----hccC-CCC---ChhhHHhhhhccEEEEecCCCCCCCh
Q 024042 174 RI------DHLM--------LPE----SASQLRTLTGLA----VSKN-LDI---VPDFFFNDFVHDVLIVWGDQDQIFPL 227 (273)
Q Consensus 174 ~~------~~~~--------~~~----~~~~~~~~~~~~----~~~~-~~~---~~~~~~~~~~~p~l~i~g~~D~~~~~ 227 (273)
.. .... ... ............ .... ... ........+..|+++++|++|.+.|.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~ 237 (282)
T COG0596 158 ALLAALGLLAALAAAARAGLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPA 237 (282)
T ss_pred hhhhcccccccccccchhccccccccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEecCCCCcCCH
Confidence 00 0000 000 000000000000 0000 000 11123344456999999999977776
Q ss_pred HHHHHHHHHhcCC-cEEEEeCCCCCCcCcCChhhHHHHHHHHhc
Q 024042 228 KMATELKELLGKK-ARLEIIENTSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 228 ~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
.....+.+.. ++ .++.+++++||+.+.++|+.+.+.+.+|++
T Consensus 238 ~~~~~~~~~~-~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 238 ELARRLAAAL-PNDARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred HHHHHHHhhC-CCCceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 6666666666 64 899999999999999999999999888554
No 69
>PLN02442 S-formylglutathione hydrolase
Probab=99.85 E-value=1.3e-19 Score=136.96 Aligned_cols=203 Identities=16% Similarity=0.116 Sum_probs=121.4
Q ss_pred CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHH---HHHhhcCC-CeEEeecCCCCCCC-----CC-----CC
Q 024042 34 DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRK---QVQFFAPH-FNVYVPDLIFFGHS-----TT-----RS 99 (273)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~---~~~~l~~~-~~v~~~d~~g~g~s-----~~-----~~ 99 (273)
-|..+.|..+-|+. ....+.|+|+++||++++. ..|.. +...+... +.|+.+|..++|.. .. ..
T Consensus 28 l~~~~~~~vy~P~~-~~~~~~Pvv~~lHG~~~~~-~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~ 105 (283)
T PLN02442 28 LGCSMTFSVYFPPA-SDSGKVPVLYWLSGLTCTD-ENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGA 105 (283)
T ss_pred cCCceEEEEEcCCc-ccCCCCCEEEEecCCCcCh-HHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCc
Confidence 45567776654431 2245679999999998887 55543 33455554 99999998766511 00 00
Q ss_pred --------c--------cccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcch
Q 024042 100 --------I--------QRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN 163 (273)
Q Consensus 100 --------~--------~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~ 163 (273)
. .+..++..+.+....+.++.++++++||||||..|+.++.++|+++++++.+++.........
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~~ 185 (283)
T PLN02442 106 GFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPINCPW 185 (283)
T ss_pred ceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCcccCch
Confidence 0 011223333444444445778899999999999999999999999999999998765331110
Q ss_pred HHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChH-HHHHHHHHh---cC
Q 024042 164 EALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLK-MATELKELL---GK 239 (273)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~-~~~~~~~~~---~~ 239 (273)
. .. .....+.. ........ ....+.........|+++++|++|.+++.. ..+.+.+.+ +.
T Consensus 186 ~--~~-----~~~~~~g~-~~~~~~~~--------d~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~ 249 (283)
T PLN02442 186 G--QK-----AFTNYLGS-DKADWEEY--------DATELVSKFNDVSATILIDQGEADKFLKEQLLPENFEEACKEAGA 249 (283)
T ss_pred h--hH-----HHHHHcCC-ChhhHHHc--------ChhhhhhhccccCCCEEEEECCCCccccccccHHHHHHHHHHcCC
Confidence 0 00 01111111 11111110 011111112234559999999999998863 244444433 46
Q ss_pred CcEEEEeCCCCCCcC
Q 024042 240 KARLEIIENTSHVPQ 254 (273)
Q Consensus 240 ~~~~~~~~~~gH~~~ 254 (273)
+++++++++.+|...
T Consensus 250 ~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 250 PVTLRLQPGYDHSYF 264 (283)
T ss_pred CeEEEEeCCCCccHH
Confidence 789999999999754
No 70
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.85 E-value=3.9e-20 Score=136.72 Aligned_cols=127 Identities=16% Similarity=0.129 Sum_probs=95.7
Q ss_pred eEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch---hHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCcccc
Q 024042 28 QTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA---IWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRT 103 (273)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~---~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~ 103 (273)
.+++.+.|..+.++..+ ...+.+++||++||++... ...|..+++.|++. |.|+.+|+||||.|.......+
T Consensus 3 ~~l~~~~g~~~~~~~~p----~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~ 78 (266)
T TIGR03101 3 FFLDAPHGFRFCLYHPP----VAVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAAR 78 (266)
T ss_pred EEecCCCCcEEEEEecC----CCCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCC
Confidence 35566666655444432 2233467999999988642 25677788888765 9999999999999976554456
Q ss_pred HHHHHHHHHHHH---HHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCC
Q 024042 104 ELFQAASLGKLL---EKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNM 158 (273)
Q Consensus 104 ~~~~~~~~~~~~---~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~ 158 (273)
...+.+|+..++ ++.+.++++++||||||.+++.++.++|++++++|+++|....
T Consensus 79 ~~~~~~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g 136 (266)
T TIGR03101 79 WDVWKEDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSG 136 (266)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccch
Confidence 666677766654 4445689999999999999999999999999999999987653
No 71
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.85 E-value=7e-19 Score=132.83 Aligned_cols=216 Identities=17% Similarity=0.114 Sum_probs=129.2
Q ss_pred CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHH--HHhhc-C-CCeEEeecC--CCCCCCCCC---------
Q 024042 34 DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQ--VQFFA-P-HFNVYVPDL--IFFGHSTTR--------- 98 (273)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~--~~~l~-~-~~~v~~~d~--~g~g~s~~~--------- 98 (273)
.+..+.|..+.|+.. ...+.|+|+++||++++. ..|... ...+. + ++.|+++|. +|+|.+...
T Consensus 23 ~~~~~~~~v~~P~~~-~~~~~P~vvllHG~~~~~-~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~ 100 (275)
T TIGR02821 23 CGVPMTFGVFLPPQA-AAGPVPVLWYLSGLTCTH-ENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGA 100 (275)
T ss_pred cCCceEEEEEcCCCc-cCCCCCEEEEccCCCCCc-cHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCc
Confidence 566667777664321 134579999999999887 666432 23343 3 499999998 454432210
Q ss_pred -----------Ccccc-HHHHHHHHHHHHHH---hCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcch
Q 024042 99 -----------SIQRT-ELFQAASLGKLLEK---IGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN 163 (273)
Q Consensus 99 -----------~~~~~-~~~~~~~~~~~~~~---~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~ 163 (273)
...+. ....++++..+++. ++.++++++||||||.+|+.++.++|+.+++++++++.........
T Consensus 101 ~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~~ 180 (275)
T TIGR02821 101 GFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVAPSRCPW 180 (275)
T ss_pred cccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccCcccCcc
Confidence 00112 23345677777776 3557899999999999999999999999999999988765432110
Q ss_pred HHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHh--hhhccEEEEecCCCCCCCh-HHHHHHHHHh---
Q 024042 164 EALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFN--DFVHDVLIVWGDQDQIFPL-KMATELKELL--- 237 (273)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~l~i~g~~D~~~~~-~~~~~~~~~~--- 237 (273)
. . ......+ ......... ..+..... ....|+++.+|+.|..++. .....+.+.+
T Consensus 181 ~---~----~~~~~~l-~~~~~~~~~-----------~~~~~~~~~~~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~ 241 (275)
T TIGR02821 181 G---Q----KAFSAYL-GADEAAWRS-----------YDASLLVADGGRHSTILIDQGTADQFLDEQLRPDAFEQACRAA 241 (275)
T ss_pred h---H----HHHHHHh-cccccchhh-----------cchHHHHhhcccCCCeeEeecCCCcccCccccHHHHHHHHHHc
Confidence 0 0 0000001 000000000 01111111 1234899999999999997 3444454444
Q ss_pred cCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 238 GKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 238 ~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
+.+.++..+||.+|.+..- ....+...+|..++
T Consensus 242 g~~v~~~~~~g~~H~f~~~--~~~~~~~~~~~~~~ 274 (275)
T TIGR02821 242 GQALTLRRQAGYDHSYYFI--ASFIADHLRHHAER 274 (275)
T ss_pred CCCeEEEEeCCCCccchhH--HHhHHHHHHHHHhh
Confidence 4668999999999986432 23344445565544
No 72
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.85 E-value=2e-19 Score=132.01 Aligned_cols=244 Identities=17% Similarity=0.260 Sum_probs=142.4
Q ss_pred CCceeEEecCCcceEE-eecCCccCCCCCCCCCeEEEEcCCCCchhHhH-HHHHHhhcCC-CeEEeecCCCCCCCCCCCc
Q 024042 24 GLSSQTIDIDDETTLH-FWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQW-RKQVQFFAPH-FNVYVPDLIFFGHSTTRSI 100 (273)
Q Consensus 24 ~~~~~~~~~~~g~~l~-~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~-~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~ 100 (273)
....+.+.++||-.+. .|... +.+..+|.||++||+.++....| +.+.+.+.++ |.|+++++|||+.+....+
T Consensus 48 ~~~re~v~~pdg~~~~ldw~~~----p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p 123 (345)
T COG0429 48 AYTRERLETPDGGFIDLDWSED----PRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSP 123 (345)
T ss_pred ccceEEEEcCCCCEEEEeeccC----ccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCc
Confidence 4466788888776544 44443 33566789999999877663444 5566777776 9999999999999886544
Q ss_pred cccHHHHHHHHHHHHHH----hCCccEEEEEeccch-HHHHHHHHhCCc-ccceEEEecCCCCCCCc------chH-HHh
Q 024042 101 QRTELFQAASLGKLLEK----IGVERFSVVGTSYGG-FVAYHMARMWPE-RVEKVVIASSGVNMKRG------DNE-ALV 167 (273)
Q Consensus 101 ~~~~~~~~~~~~~~~~~----~~~~~i~l~G~S~Gg-~~a~~~a~~~~~-~v~~~v~~~~~~~~~~~------~~~-~~~ 167 (273)
...-.-..+|+..+++. ....++..+|.|+|| +++..++.+-.+ .+.+.+.++.+.+.... ... .+.
T Consensus 124 ~~yh~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly 203 (345)
T COG0429 124 RLYHSGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLY 203 (345)
T ss_pred ceecccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhh
Confidence 32111112444444433 345889999999999 555555444221 36666666655443111 000 110
Q ss_pred hh-----hh---hhhhhhc--cCCCC-hHHHHHHhhhhhccCC----------------CCChhhHHhhhhccEEEEecC
Q 024042 168 KR-----AN---LERIDHL--MLPES-ASQLRTLTGLAVSKNL----------------DIVPDFFFNDFVHDVLIVWGD 220 (273)
Q Consensus 168 ~~-----~~---~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~p~l~i~g~ 220 (273)
.. .. ....... ..+.. ...++.......++.. .-+....+.++..|+|+|++.
T Consensus 204 ~r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~ 283 (345)
T COG0429 204 SRYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAK 283 (345)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccccccceEEEecC
Confidence 00 00 0001111 01111 1222211111111110 112223456677799999999
Q ss_pred CCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcC----Chh-hHHHHHHHHhcc
Q 024042 221 QDQIFPLKMATELKELLGKKARLEIIENTSHVPQIE----NPG-LFNSIVKNFLRG 271 (273)
Q Consensus 221 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~----~~~-~~~~~i~~fl~~ 271 (273)
+|++++++..........+++.+...+.+||..++. +|. ...+.+.+||+.
T Consensus 284 DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~ 339 (345)
T COG0429 284 DDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDP 339 (345)
T ss_pred CCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHH
Confidence 999999987777666455899999999999987665 343 455677777764
No 73
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.83 E-value=7.2e-19 Score=128.12 Aligned_cols=179 Identities=21% Similarity=0.240 Sum_probs=109.3
Q ss_pred CCCCCCeEEEEcCCCCchhHhHHHHHH-hhcC-CCeEEeecCCC------CCC---CCCC-----C-c---cccHHHHHH
Q 024042 50 KTLKKPSLVLIHGFGPEAIWQWRKQVQ-FFAP-HFNVYVPDLIF------FGH---STTR-----S-I---QRTELFQAA 109 (273)
Q Consensus 50 ~~~~~~~vi~~hG~~~~~~~~~~~~~~-~l~~-~~~v~~~d~~g------~g~---s~~~-----~-~---~~~~~~~~~ 109 (273)
.++..++||++||+|.+. ..+..... .+.. ...++.++-|. .|. +..+ . . .......++
T Consensus 10 ~~~~~~lvi~LHG~G~~~-~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~ 88 (216)
T PF02230_consen 10 KGKAKPLVILLHGYGDSE-DLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAE 88 (216)
T ss_dssp SST-SEEEEEE--TTS-H-HHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHH
T ss_pred CCCCceEEEEECCCCCCc-chhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHH
Confidence 366788999999999998 77766665 2222 36666665431 222 1111 1 1 123333444
Q ss_pred HHHHHHHHh-----CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCCh
Q 024042 110 SLGKLLEKI-----GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESA 184 (273)
Q Consensus 110 ~~~~~~~~~-----~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (273)
.+.++++.. +.+++++.|+|.||.+|+.++.++|+.+.++|.+++........... .
T Consensus 89 ~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~~~~------------------~ 150 (216)
T PF02230_consen 89 RLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESELEDR------------------P 150 (216)
T ss_dssp HHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCCHCC------------------H
T ss_pred HHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccccccccc------------------c
Confidence 555555532 44789999999999999999999999999999999866543211000 0
Q ss_pred HHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCCCCCcCcCChhhH
Q 024042 185 SQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENTSHVPQIENPGLF 261 (273)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~~~~~~~ 261 (273)
.... ..|++++||..|+++|.+.++...+.+ +.+++++.+++.||... .+.
T Consensus 151 ---------------~~~~-------~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~----~~~ 204 (216)
T PF02230_consen 151 ---------------EALA-------KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEIS----PEE 204 (216)
T ss_dssp ---------------CCCC-------TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS------HHH
T ss_pred ---------------cccC-------CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCC----HHH
Confidence 0000 228999999999999999888887777 35689999999999863 355
Q ss_pred HHHHHHHhcccC
Q 024042 262 NSIVKNFLRGSL 273 (273)
Q Consensus 262 ~~~i~~fl~~~l 273 (273)
.+.+.+||++++
T Consensus 205 ~~~~~~~l~~~~ 216 (216)
T PF02230_consen 205 LRDLREFLEKHI 216 (216)
T ss_dssp HHHHHHHHHHH-
T ss_pred HHHHHHHHhhhC
Confidence 567889998753
No 74
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.82 E-value=6.8e-18 Score=121.49 Aligned_cols=214 Identities=15% Similarity=0.166 Sum_probs=142.1
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCc-cccHHHHHHHHHHHHHHhCC-ccEEEEE
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSI-QRTELFQAASLGKLLEKIGV-ERFSVVG 127 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~-~~~~~~~~~~~~~~~~~~~~-~~i~l~G 127 (273)
++...+||-+||.+++. ..++.+.+.|.+. .+++.+++||+|.+..+.. .++-.+....+.++++.+++ ++++++|
T Consensus 32 gs~~gTVv~~hGsPGSH-~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~~~~i~~g 110 (297)
T PF06342_consen 32 GSPLGTVVAFHGSPGSH-NDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIKGKLIFLG 110 (297)
T ss_pred CCCceeEEEecCCCCCc-cchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCCCceEEEE
Confidence 44455999999999999 9999999999887 9999999999999987655 46788889999999999988 6789999
Q ss_pred eccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccC-------------------CCChHHHH
Q 024042 128 TSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLML-------------------PESASQLR 188 (273)
Q Consensus 128 ~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~ 188 (273)
||.|+-.|+.++..+| ..++++++|+.......-...........+...+. ........
T Consensus 111 HSrGcenal~la~~~~--~~g~~lin~~G~r~HkgIrp~~r~~~i~~l~~~lp~~~~~~i~~~~y~~iG~KV~~GeeA~n 188 (297)
T PF06342_consen 111 HSRGCENALQLAVTHP--LHGLVLINPPGLRPHKGIRPLSRMETINYLYDLLPRFIINAIMYFYYRMIGFKVSDGEEAIN 188 (297)
T ss_pred eccchHHHHHHHhcCc--cceEEEecCCccccccCcCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhCeeecChHHHHH
Confidence 9999999999999986 77999999876544332111111100001111000 00011111
Q ss_pred HHh---hhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh--------------------------cC
Q 024042 189 TLT---GLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL--------------------------GK 239 (273)
Q Consensus 189 ~~~---~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~--------------------------~~ 239 (273)
... ...+... ..-...+++-..|+++++|.+|.++..+...++...+ +.
T Consensus 189 a~r~m~~~df~~q--~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f~~l~Hf~~~~~~seee~~kI~~~f~~~~ 266 (297)
T PF06342_consen 189 AMRSMQNCDFEEQ--KEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKFKGLDHFNIEKEISEEEKPKILKSFASGQ 266 (297)
T ss_pred HHHHHHhcCHHHH--HHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHhCCccceeeecCCChhHHHHHHHHHhcCC
Confidence 100 0000000 0001112222249999999999998777666654443 11
Q ss_pred CcEEEEeCCCCCCcCcCChhhHHHHHHHHh
Q 024042 240 KARLEIIENTSHVPQIENPGLFNSIVKNFL 269 (273)
Q Consensus 240 ~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 269 (273)
....+.+.+.||+.+-.+++.+++.+...|
T Consensus 267 ~~~sv~f~~dgHf~qK~~A~lIA~~i~~mf 296 (297)
T PF06342_consen 267 KGASVFFAKDGHFQQKFRADLIAEAIKKMF 296 (297)
T ss_pred ceeEEEEecCChHHhHHHHHHHHHHHHHhh
Confidence 233456777899998888888888887765
No 75
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.82 E-value=7.8e-19 Score=134.54 Aligned_cols=234 Identities=15% Similarity=0.138 Sum_probs=132.7
Q ss_pred CceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcC-CCeEEeecCCCCCCCCCCCcccc
Q 024042 25 LSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAP-HFNVYVPDLIFFGHSTTRSIQRT 103 (273)
Q Consensus 25 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~g~s~~~~~~~~ 103 (273)
++...|.. +|.+|..+...| .++++.|+||++.|.-+...+.|..+.+.+.+ ++.++++|.||.|.|...+...+
T Consensus 165 i~~v~iP~-eg~~I~g~LhlP---~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D 240 (411)
T PF06500_consen 165 IEEVEIPF-EGKTIPGYLHLP---SGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQD 240 (411)
T ss_dssp EEEEEEEE-TTCEEEEEEEES---SSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-
T ss_pred cEEEEEee-CCcEEEEEEEcC---CCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcC
Confidence 45555555 557776655442 34566788888888877773445555566654 49999999999999864433334
Q ss_pred HHHHHHHHHHHHHHh---CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhh--hhhhhhhhhc
Q 024042 104 ELFQAASLGKLLEKI---GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVK--RANLERIDHL 178 (273)
Q Consensus 104 ~~~~~~~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 178 (273)
.+...+.+.+.+... +..+|.++|.|+||++|.++|..++++++++|..+++....-........ ......+...
T Consensus 241 ~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~~~~~~~P~my~d~LA~r 320 (411)
T PF06500_consen 241 SSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDPEWQQRVPDMYLDVLASR 320 (411)
T ss_dssp CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-HHHHTTS-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccHHHHhcCCHHHHHHHHHH
Confidence 445566666666655 34799999999999999999998888999999999986644221111111 1111111121
Q ss_pred cCCC--ChHHHHHHhhhhhccCCCCChhhHH--hhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCC-CCc
Q 024042 179 MLPE--SASQLRTLTGLAVSKNLDIVPDFFF--NDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTS-HVP 253 (273)
Q Consensus 179 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~g-H~~ 253 (273)
+... ....+......... ....++ ++...|+|.+.+++|.++|.+..+.++..- .+.+...++... |..
T Consensus 321 lG~~~~~~~~l~~el~~~SL-----k~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s-~~gk~~~~~~~~~~~g 394 (411)
T PF06500_consen 321 LGMAAVSDESLRGELNKFSL-----KTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAESS-TDGKALRIPSKPLHMG 394 (411)
T ss_dssp CT-SCE-HHHHHHHGGGGST-----TTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTB-TT-EEEEE-SSSHHHH
T ss_pred hCCccCCHHHHHHHHHhcCc-----chhccccCCCCCcceEEeecCCCCCCCHHHHHHHHhcC-CCCceeecCCCccccc
Confidence 1111 12222222111111 111222 455669999999999999999998888776 778888887544 332
Q ss_pred CcCChhhHHHHHHHHhccc
Q 024042 254 QIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 254 ~~~~~~~~~~~i~~fl~~~ 272 (273)
-+.-...+.+||++.
T Consensus 395 ----y~~al~~~~~Wl~~~ 409 (411)
T PF06500_consen 395 ----YPQALDEIYKWLEDK 409 (411)
T ss_dssp ----HHHHHHHHHHHHHHH
T ss_pred ----hHHHHHHHHHHHHHh
Confidence 235567778888764
No 76
>PRK10162 acetyl esterase; Provisional
Probab=99.82 E-value=4.9e-18 Score=130.60 Aligned_cols=229 Identities=12% Similarity=0.020 Sum_probs=132.9
Q ss_pred eEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCC---CchhHhHHHHHHhhcC--CCeEEeecCCCCCCCCCCCccc
Q 024042 28 QTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFG---PEAIWQWRKQVQFFAP--HFNVYVPDLIFFGHSTTRSIQR 102 (273)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~---~~~~~~~~~~~~~l~~--~~~v~~~d~~g~g~s~~~~~~~ 102 (273)
..+...+| .+..+.+.| .....|+||++||.+ ++. ..|..+...|++ ++.|+++|+|...+...+....
T Consensus 60 ~~i~~~~g-~i~~~~y~P----~~~~~p~vv~~HGGg~~~g~~-~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~~~~ 133 (318)
T PRK10162 60 YMVPTPYG-QVETRLYYP----QPDSQATLFYLHGGGFILGNL-DTHDRIMRLLASYSGCTVIGIDYTLSPEARFPQAIE 133 (318)
T ss_pred EEEecCCC-ceEEEEECC----CCCCCCEEEEEeCCcccCCCc-hhhhHHHHHHHHHcCCEEEEecCCCCCCCCCCCcHH
Confidence 34444455 344444432 133468999999966 444 567777777765 4999999999765543333222
Q ss_pred cHHHHHHHHHHHHHHhCC--ccEEEEEeccchHHHHHHHHhC------CcccceEEEecCCCCCCCcchHHHhhhhhhhh
Q 024042 103 TELFQAASLGKLLEKIGV--ERFSVVGTSYGGFVAYHMARMW------PERVEKVVIASSGVNMKRGDNEALVKRANLER 174 (273)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~------~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 174 (273)
+.....+++.+..+.++. ++++++|+|+||.+|+.++... +.++++++++.|......... .. ...
T Consensus 134 D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~s--~~-~~~--- 207 (318)
T PRK10162 134 EIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVS--RR-LLG--- 207 (318)
T ss_pred HHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCChh--HH-HhC---
Confidence 333344445544555554 6899999999999999988753 356899999988766432110 00 000
Q ss_pred hhhccCCCChHHHHHHhhhhhccC-----CCCChh-hHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEE
Q 024042 175 IDHLMLPESASQLRTLTGLAVSKN-----LDIVPD-FFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEI 245 (273)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~ 245 (273)
..........+........... ....+. ..+..-..|+++++|+.|.+.+ ..+.+.+++ +.++++++
T Consensus 208 --~~~~~l~~~~~~~~~~~y~~~~~~~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L~d--e~~~~~~~L~~aGv~v~~~~ 283 (318)
T PRK10162 208 --GVWDGLTQQDLQMYEEAYLSNDADRESPYYCLFNNDLTRDVPPCFIAGAEFDPLLD--DSRLLYQTLAAHQQPCEFKL 283 (318)
T ss_pred --CCccccCHHHHHHHHHHhCCCccccCCcccCcchhhhhcCCCCeEEEecCCCcCcC--hHHHHHHHHHHcCCCEEEEE
Confidence 0000011111111111111100 000110 0111223499999999999864 455565555 46799999
Q ss_pred eCCCCCCcCcC-----ChhhHHHHHHHHhccc
Q 024042 246 IENTSHVPQIE-----NPGLFNSIVKNFLRGS 272 (273)
Q Consensus 246 ~~~~gH~~~~~-----~~~~~~~~i~~fl~~~ 272 (273)
+++..|.+... ...+..+.+.+||++.
T Consensus 284 ~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~ 315 (318)
T PRK10162 284 YPGTLHAFLHYSRMMDTADDALRDGAQFFTAQ 315 (318)
T ss_pred ECCCceehhhccCchHHHHHHHHHHHHHHHHH
Confidence 99999965432 2346667777888764
No 77
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.82 E-value=1.7e-18 Score=151.75 Aligned_cols=216 Identities=16% Similarity=0.212 Sum_probs=137.6
Q ss_pred CCCCeEEEEcCCCCchhHhHHHH-----HHhhcCC-CeEEeecCCCCCCCCCCCc--cccHHHHHHHHHHHHHH---hCC
Q 024042 52 LKKPSLVLIHGFGPEAIWQWRKQ-----VQFFAPH-FNVYVPDLIFFGHSTTRSI--QRTELFQAASLGKLLEK---IGV 120 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~~~~~~~~-----~~~l~~~-~~v~~~d~~g~g~s~~~~~--~~~~~~~~~~~~~~~~~---~~~ 120 (273)
..+++||++||++.+. ..|+.. ++.|.+. |+|+++|+ |.++.+.. ..+..+++..+.+.++. +..
T Consensus 65 ~~~~plllvhg~~~~~-~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~ 140 (994)
T PRK07868 65 PVGPPVLMVHPMMMSA-DMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDVTG 140 (994)
T ss_pred CCCCcEEEECCCCCCc-cceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHhhC
Confidence 4668999999999988 888865 6778665 99999995 55544322 24556666555555554 344
Q ss_pred ccEEEEEeccchHHHHHHHHhC-CcccceEEEecCCCCCCCcc----hHH------------Hhhhhhh-----------
Q 024042 121 ERFSVVGTSYGGFVAYHMARMW-PERVEKVVIASSGVNMKRGD----NEA------------LVKRANL----------- 172 (273)
Q Consensus 121 ~~i~l~G~S~Gg~~a~~~a~~~-~~~v~~~v~~~~~~~~~~~~----~~~------------~~~~~~~----------- 172 (273)
++++++||||||.+++.++..+ +++|+++|+++++.++.... ... +......
T Consensus 141 ~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 220 (994)
T PRK07868 141 RDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTGFQM 220 (994)
T ss_pred CceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHHHHh
Confidence 7899999999999999988754 55899999988775532110 000 0000000
Q ss_pred -------h---hhhhccCC-C---C-----------------hHHHHHHhhhhhccCCCCC-----h--hhHHhhhhccE
Q 024042 173 -------E---RIDHLMLP-E---S-----------------ASQLRTLTGLAVSKNLDIV-----P--DFFFNDFVHDV 214 (273)
Q Consensus 173 -------~---~~~~~~~~-~---~-----------------~~~~~~~~~~~~~~~~~~~-----~--~~~~~~~~~p~ 214 (273)
. .+...+.. . . ...........+..+.... . ...+.++..|+
T Consensus 221 l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~~i~~P~ 300 (994)
T PRK07868 221 LDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLADITCPV 300 (994)
T ss_pred cChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEcchhhCCCCE
Confidence 0 00000000 0 0 0001111111111000000 0 01356777799
Q ss_pred EEEecCCCCCCChHHHHHHHHHhcCCcEE-EEeCCCCCCcCc---CChhhHHHHHHHHhccc
Q 024042 215 LIVWGDQDQIFPLKMATELKELLGKKARL-EIIENTSHVPQI---ENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 215 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~gH~~~~---~~~~~~~~~i~~fl~~~ 272 (273)
|+++|++|.++|++.++.+.+.+ ++.++ .+++++||+.++ ..+++++..|.+||+++
T Consensus 301 L~i~G~~D~ivp~~~~~~l~~~i-~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~ 361 (994)
T PRK07868 301 LAFVGEVDDIGQPASVRGIRRAA-PNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWL 361 (994)
T ss_pred EEEEeCCCCCCCHHHHHHHHHhC-CCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHh
Confidence 99999999999999999999998 88887 677899998654 45778999999999864
No 78
>PLN00021 chlorophyllase
Probab=99.81 E-value=1.4e-18 Score=132.02 Aligned_cols=175 Identities=16% Similarity=0.178 Sum_probs=113.2
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHH-------hCCcc
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEK-------IGVER 122 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 122 (273)
.+..|+|||+||++.+. ..|..+++.|++. |.|+++|++|++.+.......+..+..+++.+.++. .+.++
T Consensus 49 ~g~~PvVv~lHG~~~~~-~~y~~l~~~Las~G~~VvapD~~g~~~~~~~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~ 127 (313)
T PLN00021 49 AGTYPVLLFLHGYLLYN-SFYSQLLQHIASHGFIVVAPQLYTLAGPDGTDEIKDAAAVINWLSSGLAAVLPEGVRPDLSK 127 (313)
T ss_pred CCCCCEEEEECCCCCCc-ccHHHHHHHHHhCCCEEEEecCCCcCCCCchhhHHHHHHHHHHHHhhhhhhcccccccChhh
Confidence 45679999999999888 8899999999887 999999999865432111111222223333332222 23478
Q ss_pred EEEEEeccchHHHHHHHHhCCc-----ccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhcc
Q 024042 123 FSVVGTSYGGFVAYHMARMWPE-----RVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSK 197 (273)
Q Consensus 123 i~l~G~S~Gg~~a~~~a~~~~~-----~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (273)
++++|||+||.+|+.++..+++ ++.++|.++|........ ...+..+ .+
T Consensus 128 v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~------------------~~~p~il------~~-- 181 (313)
T PLN00021 128 LALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGK------------------QTPPPVL------TY-- 181 (313)
T ss_pred eEEEEECcchHHHHHHHhhccccccccceeeEEeecccccccccc------------------CCCCccc------cc--
Confidence 9999999999999999998764 578999998865432110 0000000 00
Q ss_pred CCCCChhhHHhhhhccEEEEecCCCC-----C----CChH-HHHHHHHHhcCCcEEEEeCCCCCCcCcCCh
Q 024042 198 NLDIVPDFFFNDFVHDVLIVWGDQDQ-----I----FPLK-MATELKELLGKKARLEIIENTSHVPQIENP 258 (273)
Q Consensus 198 ~~~~~~~~~~~~~~~p~l~i~g~~D~-----~----~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 258 (273)
.+. ..++..|+|++.+..|. . .|.. ...++++.+++.+...+++++||+-++++.
T Consensus 182 ----~~~--s~~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~~~~~~~~~~~gH~~~~~~~ 246 (313)
T PLN00021 182 ----APH--SFNLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKAPAVHFVAKDYGHMDMLDDD 246 (313)
T ss_pred ----Ccc--cccCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcCCCeeeeeecCCCcceeecCC
Confidence 000 00133499999999763 2 2233 346777777678888899999998776543
No 79
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.81 E-value=5.4e-18 Score=129.05 Aligned_cols=248 Identities=13% Similarity=0.109 Sum_probs=142.1
Q ss_pred hCCCceeEEecCCcceEEeecCCccCC---CCCCCCCeEEEEcCCCCchhHhH-HHHHHhhcCC-CeEEeecCCCCCCCC
Q 024042 22 SAGLSSQTIDIDDETTLHFWGPKLEDD---HKTLKKPSLVLIHGFGPEAIWQW-RKQVQFFAPH-FNVYVPDLIFFGHST 96 (273)
Q Consensus 22 ~~~~~~~~~~~~~g~~l~~~~~~~~~~---~~~~~~~~vi~~hG~~~~~~~~~-~~~~~~l~~~-~~v~~~d~~g~g~s~ 96 (273)
...++++.++++||.++.+-...+... ..+...|+||++||+.+++.+.| +.++..+.+. |+|++++.||+|.+.
T Consensus 90 ~~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~ 169 (409)
T KOG1838|consen 90 PVEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSK 169 (409)
T ss_pred CCcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCc
Confidence 344678899999998887765532221 11356799999999877663444 4555555554 999999999999988
Q ss_pred CCCccccHHHHHHHHHHHHHH----hCCccEEEEEeccchHHHHHHHHhCCcc---cceEEEecCCCCC--CCcc----h
Q 024042 97 TRSIQRTELFQAASLGKLLEK----IGVERFSVVGTSYGGFVAYHMARMWPER---VEKVVIASSGVNM--KRGD----N 163 (273)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~----~~~~~i~l~G~S~Gg~~a~~~a~~~~~~---v~~~v~~~~~~~~--~~~~----~ 163 (273)
-..+..-.....+|+.+++++ +...++..+|.||||.+.+.+..+..++ +.++.+++|+-.. .... .
T Consensus 170 LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~~~~ 249 (409)
T KOG1838|consen 170 LTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIETPLY 249 (409)
T ss_pred cCCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHhcccc
Confidence 655533222223444444444 4557899999999999999998875432 4455555554322 1110 1
Q ss_pred HHHhhhhhhhhhhh------------------ccCCCChHHHHHHhhhhhccCC-------CCChhhHHhhhhccEEEEe
Q 024042 164 EALVKRANLERIDH------------------LMLPESASQLRTLTGLAVSKNL-------DIVPDFFFNDFVHDVLIVW 218 (273)
Q Consensus 164 ~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~p~l~i~ 218 (273)
..+........+.. .....+...+.+......+... ...+...+.++..|+|+|+
T Consensus 250 ~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~~~v~~I~VP~L~in 329 (409)
T KOG1838|consen 250 RRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASSSNYVDKIKVPLLCIN 329 (409)
T ss_pred hHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcchhhhcccccccEEEEe
Confidence 11111100000000 0011111122222211111111 1133344556666999999
Q ss_pred cCCCCCCChHHHH-HHHHHhcCCcEEEEeCCCCCCcCcCC----hhhHHHH-HHHHhc
Q 024042 219 GDQDQIFPLKMAT-ELKELLGKKARLEIIENTSHVPQIEN----PGLFNSI-VKNFLR 270 (273)
Q Consensus 219 g~~D~~~~~~~~~-~~~~~~~~~~~~~~~~~~gH~~~~~~----~~~~~~~-i~~fl~ 270 (273)
+.+|+++|.+..- ...... +++-+++-..+||..++|. +..+.+. +.+|+.
T Consensus 330 a~DDPv~p~~~ip~~~~~~n-p~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~ 386 (409)
T KOG1838|consen 330 AADDPVVPEEAIPIDDIKSN-PNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLG 386 (409)
T ss_pred cCCCCCCCcccCCHHHHhcC-CcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHH
Confidence 9999999986332 233333 7888888889999877765 2333343 666654
No 80
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.80 E-value=1.1e-17 Score=121.57 Aligned_cols=169 Identities=15% Similarity=0.095 Sum_probs=99.8
Q ss_pred CCCCCeEEEEcCCCCchhHhHH---HHHHhhcCC-CeEEeecCCCCCCCCCCC----------ccccHHHHHHHHHHHHH
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWR---KQVQFFAPH-FNVYVPDLIFFGHSTTRS----------IQRTELFQAASLGKLLE 116 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~---~~~~~l~~~-~~v~~~d~~g~g~s~~~~----------~~~~~~~~~~~~~~~~~ 116 (273)
.++.|+||++||.+++. ..+. .+...+.+. |.|+++|++|++.+.... ......+..+.+..+.+
T Consensus 10 ~~~~P~vv~lHG~~~~~-~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 88 (212)
T TIGR01840 10 TGPRALVLALHGCGQTA-SAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKA 88 (212)
T ss_pred CCCCCEEEEeCCCCCCH-HHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHH
Confidence 35679999999998877 5444 233444444 999999999987543210 00112222222333333
Q ss_pred Hh--CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhh
Q 024042 117 KI--GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLA 194 (273)
Q Consensus 117 ~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (273)
.. +.++++|+|||+||.+++.++.++|+.+.+++.+++............. ...........+.......
T Consensus 89 ~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 160 (212)
T TIGR01840 89 NYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPYGEASSSISAT--------PQMCTAATAASVCRLVRGM 160 (212)
T ss_pred hcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcccccccchhhH--------hhcCCCCCHHHHHHHHhcc
Confidence 33 3368999999999999999999999999999888876543221111000 0001111112222221111
Q ss_pred hccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh
Q 024042 195 VSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL 237 (273)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~ 237 (273)
.... .....|++++||++|.++|.+.++.+.+.+
T Consensus 161 ~~~~---------~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l 194 (212)
T TIGR01840 161 QSEY---------NGPTPIMSVVHGDADYTVLPGNADEIRDAM 194 (212)
T ss_pred CCcc---------cCCCCeEEEEEcCCCceeCcchHHHHHHHH
Confidence 1000 011115789999999999999888888877
No 81
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.80 E-value=1.1e-17 Score=122.29 Aligned_cols=178 Identities=22% Similarity=0.212 Sum_probs=116.2
Q ss_pred CCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCcc---c--------cHHHHHHHHHHHHHHh-
Q 024042 52 LKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQ---R--------TELFQAASLGKLLEKI- 118 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~---~--------~~~~~~~~~~~~~~~~- 118 (273)
++.|.||++|++.+-. ...+.+++.|++. |.|+++|+-+-......... . ..+...+++.+.++.+
T Consensus 12 ~~~~~Vvv~~d~~G~~-~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~ 90 (218)
T PF01738_consen 12 GPRPAVVVIHDIFGLN-PNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLR 90 (218)
T ss_dssp SSEEEEEEE-BTTBS--HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCc-hHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 4789999999988776 6777888888877 99999998643331111110 0 1223445555555555
Q ss_pred --C---CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhh
Q 024042 119 --G---VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGL 193 (273)
Q Consensus 119 --~---~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (273)
. .++|.++|+|+||.+|+.++... ..+++.+..-|....
T Consensus 91 ~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~----------------------------------- 134 (218)
T PF01738_consen 91 AQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPP----------------------------------- 134 (218)
T ss_dssp CTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSG-----------------------------------
T ss_pred hccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCC-----------------------------------
Confidence 2 36899999999999999999887 569998887661110
Q ss_pred hhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCCCCCcCcCCh--------hhHH
Q 024042 194 AVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENTSHVPQIENP--------GLFN 262 (273)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~~~~--------~~~~ 262 (273)
..+.....++..|+++++|++|+.++.+..+.+.+.+ +...++++|+|++|.+..... ++..
T Consensus 135 -------~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~ 207 (218)
T PF01738_consen 135 -------PPPLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAW 207 (218)
T ss_dssp -------GGHHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHH
T ss_pred -------CcchhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHH
Confidence 0122233445559999999999999999888888777 578999999999998765322 3566
Q ss_pred HHHHHHhcccC
Q 024042 263 SIVKNFLRGSL 273 (273)
Q Consensus 263 ~~i~~fl~~~l 273 (273)
+.+.+||+++|
T Consensus 208 ~~~~~ff~~~L 218 (218)
T PF01738_consen 208 QRTLAFFKRHL 218 (218)
T ss_dssp HHHHHHHCC--
T ss_pred HHHHHHHHhcC
Confidence 78889999876
No 82
>COG0400 Predicted esterase [General function prediction only]
Probab=99.79 E-value=1.7e-17 Score=117.36 Aligned_cols=174 Identities=20% Similarity=0.257 Sum_probs=120.9
Q ss_pred CCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCC--CCC----CCCCCccc-------cHHHHHHHHHHHHH
Q 024042 50 KTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIF--FGH----STTRSIQR-------TELFQAASLGKLLE 116 (273)
Q Consensus 50 ~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g--~g~----s~~~~~~~-------~~~~~~~~~~~~~~ 116 (273)
.++..|+||++||+|++. ..+.+....+..+..++.+.=+- .|. +......+ .....++.+....+
T Consensus 14 ~~p~~~~iilLHG~Ggde-~~~~~~~~~~~P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~ 92 (207)
T COG0400 14 GDPAAPLLILLHGLGGDE-LDLVPLPELILPNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAE 92 (207)
T ss_pred CCCCCcEEEEEecCCCCh-hhhhhhhhhcCCCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHH
Confidence 356677999999999988 77777777766666666654220 000 00011111 22333444555555
Q ss_pred HhCC--ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhh
Q 024042 117 KIGV--ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLA 194 (273)
Q Consensus 117 ~~~~--~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (273)
+.+. ++++++|+|.||.+++.+..++|+.+++++++++......... +
T Consensus 93 ~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~~~-----------------~------------- 142 (207)
T COG0400 93 EYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPELL-----------------P------------- 142 (207)
T ss_pred HhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCccc-----------------c-------------
Confidence 6665 8999999999999999999999999999999998766542100 0
Q ss_pred hccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 195 VSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
..-..|+++++|+.|+++|...+.++.+.+ +.+++...++ .||... .+..+.+.+|+.+
T Consensus 143 -------------~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH~i~----~e~~~~~~~wl~~ 204 (207)
T COG0400 143 -------------DLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE-GGHEIP----PEELEAARSWLAN 204 (207)
T ss_pred -------------ccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCCcCC----HHHHHHHHHHHHh
Confidence 000118999999999999998888777766 5788899998 899874 3455667778875
Q ss_pred c
Q 024042 272 S 272 (273)
Q Consensus 272 ~ 272 (273)
.
T Consensus 205 ~ 205 (207)
T COG0400 205 T 205 (207)
T ss_pred c
Confidence 4
No 83
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.79 E-value=3.6e-17 Score=119.30 Aligned_cols=236 Identities=16% Similarity=0.134 Sum_probs=139.9
Q ss_pred eEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHH-----HhhcCCCeEEeecCCCCCCCCCCCc--
Q 024042 28 QTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQV-----QFFAPHFNVYVPDLIFFGHSTTRSI-- 100 (273)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~-----~~l~~~~~v~~~d~~g~g~s~~~~~-- 100 (273)
+.++++-| .+++...| ..++++|++|-.|..|.+....|..+. ..+.++|.++=+|.||+.......+
T Consensus 2 h~v~t~~G-~v~V~v~G----~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~~ 76 (283)
T PF03096_consen 2 HDVETPYG-SVHVTVQG----DPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLPEG 76 (283)
T ss_dssp EEEEETTE-EEEEEEES----S--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----TT
T ss_pred ceeccCce-EEEEEEEe----cCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhceEEEEEeCCCCCCCccccccc
Confidence 56777666 67777777 334469999999999988844466554 5677789999999999876553322
Q ss_pred --cccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhh-------h
Q 024042 101 --QRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRA-------N 171 (273)
Q Consensus 101 --~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~-------~ 171 (273)
..++++.++++..++++++.+.++-+|-..||.+..++|..+|++|.|+|++++.............+.. +
T Consensus 77 y~yPsmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~~g 156 (283)
T PF03096_consen 77 YQYPSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFYQKLSSWLLYSYG 156 (283)
T ss_dssp -----HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHHHHHH-------C
T ss_pred ccccCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHHHHHhcccccccc
Confidence 2389999999999999999999999999999999999999999999999999986654332110000000 0
Q ss_pred h----------hhhhhccCCCChHHHHHHhhhhhccCCCCChhhH-------------HhhhhccEEEEecCCCCCCChH
Q 024042 172 L----------ERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFF-------------FNDFVHDVLIVWGDQDQIFPLK 228 (273)
Q Consensus 172 ~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~p~l~i~g~~D~~~~~~ 228 (273)
. ..+.........+.................-..+ .....+|+|++.|+..+. .+
T Consensus 157 mt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~--~~ 234 (283)
T PF03096_consen 157 MTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPH--VD 234 (283)
T ss_dssp TTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTT--HH
T ss_pred cccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcc--hh
Confidence 0 0000000001111111111111000000000011 122235999999999877 56
Q ss_pred HHHHHHHHh-cCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhc
Q 024042 229 MATELKELL-GKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 229 ~~~~~~~~~-~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
.+..+..++ +.+.++..++++|=....|+|..+++.++-||+
T Consensus 235 ~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQ 277 (283)
T PF03096_consen 235 DVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQ 277 (283)
T ss_dssp HHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHH
T ss_pred hHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHc
Confidence 777888888 456788999999999999999999999999986
No 84
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.77 E-value=3.9e-17 Score=124.29 Aligned_cols=232 Identities=17% Similarity=0.111 Sum_probs=130.7
Q ss_pred EecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCc---------
Q 024042 30 IDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSI--------- 100 (273)
Q Consensus 30 ~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~--------- 100 (273)
++..+|..++.+...|+. ..++.|.||.+||.++.. ..+......-..++.|+.+|.||+|.......
T Consensus 61 f~s~~g~~V~g~l~~P~~--~~~~~Pavv~~hGyg~~~-~~~~~~~~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g 137 (320)
T PF05448_consen 61 FESFDGSRVYGWLYRPKN--AKGKLPAVVQFHGYGGRS-GDPFDLLPWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKG 137 (320)
T ss_dssp EEEGGGEEEEEEEEEES---SSSSEEEEEEE--TT--G-GGHHHHHHHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSS
T ss_pred EEccCCCEEEEEEEecCC--CCCCcCEEEEecCCCCCC-CCcccccccccCCeEEEEecCCCCCCCCCCccccCCCCCcc
Confidence 333478888877776432 356788999999999887 66666666666679999999999993221100
Q ss_pred -----------cccHHHHHHHHHHHHHHh------CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcch
Q 024042 101 -----------QRTELFQAASLGKLLEKI------GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN 163 (273)
Q Consensus 101 -----------~~~~~~~~~~~~~~~~~~------~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~ 163 (273)
.+-......|+...++.+ +.++|.+.|.|.||.+++.+|+..+ +|++++...|.........
T Consensus 138 ~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d~~~~~ 216 (320)
T PF05448_consen 138 HITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCDFRRAL 216 (320)
T ss_dssp STTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSSHHHHH
T ss_pred HHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccchhhhh
Confidence 011122334444444433 3478999999999999999999875 6999999888654321100
Q ss_pred HHHhhhhhhhhhhhccC--CCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCc
Q 024042 164 EALVKRANLERIDHLML--PESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKA 241 (273)
Q Consensus 164 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~ 241 (273)
...........+...+. ........+......+ .....+..++.+|+++-.|-.|.++|+...-..++.++..+
T Consensus 217 ~~~~~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y----~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K 292 (320)
T PF05448_consen 217 ELRADEGPYPEIRRYFRWRDPHHEREPEVFETLSY----FDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPK 292 (320)
T ss_dssp HHT--STTTHHHHHHHHHHSCTHCHHHHHHHHHHT----T-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--SSE
T ss_pred hcCCccccHHHHHHHHhccCCCcccHHHHHHHHhh----hhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCCCe
Confidence 00000000011111111 0111111111111111 13445677888899999999999999999999999986679
Q ss_pred EEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 242 RLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 242 ~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
++.++|..||... ++.-.+...+||+++
T Consensus 293 ~l~vyp~~~He~~---~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 293 ELVVYPEYGHEYG---PEFQEDKQLNFLKEH 320 (320)
T ss_dssp EEEEETT--SSTT---HHHHHHHHHHHHHH-
T ss_pred eEEeccCcCCCch---hhHHHHHHHHHHhcC
Confidence 9999999999753 223367777888764
No 85
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.77 E-value=1.2e-16 Score=108.01 Aligned_cols=173 Identities=18% Similarity=0.166 Sum_probs=121.2
Q ss_pred CCCCCeEEEEcCC---CCch-hHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccc-cHHHHHHHHHHHHHHhCC--cc
Q 024042 51 TLKKPSLVLIHGF---GPEA-IWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQR-TELFQAASLGKLLEKIGV--ER 122 (273)
Q Consensus 51 ~~~~~~vi~~hG~---~~~~-~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~-~~~~~~~~~~~~~~~~~~--~~ 122 (273)
.+..|..|.+|.- +++. ......++..|.+. |.++.+|+||.|.|.+..... ...+.+..+.++++.... ..
T Consensus 25 ~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aaldW~~~~hp~s~~ 104 (210)
T COG2945 25 TPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGELEDAAAALDWLQARHPDSAS 104 (210)
T ss_pred CCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCcchHHHHHHHHHHHHhhCCCchh
Confidence 4677888888862 2222 13445666777777 999999999999998765432 333345555555555543 22
Q ss_pred EEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCC
Q 024042 123 FSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIV 202 (273)
Q Consensus 123 i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (273)
..+.|+|+|+.+++++|.+.|+ ....+.+.|.....
T Consensus 105 ~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~~~------------------------------------------- 140 (210)
T COG2945 105 CWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPINAY------------------------------------------- 140 (210)
T ss_pred hhhcccchHHHHHHHHHHhccc-ccceeeccCCCCch-------------------------------------------
Confidence 4689999999999999999876 55555555543310
Q ss_pred hhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhc
Q 024042 203 PDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 203 ~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
...+......|.++|+|+.|.+++.....++.+. ...+++.+++++||++- +-..+.+.+.+||.
T Consensus 141 dfs~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~--~~~~~i~i~~a~HFF~g-Kl~~l~~~i~~~l~ 205 (210)
T COG2945 141 DFSFLAPCPSPGLVIQGDADDVVDLVAVLKWQES--IKITVITIPGADHFFHG-KLIELRDTIADFLE 205 (210)
T ss_pred hhhhccCCCCCceeEecChhhhhcHHHHHHhhcC--CCCceEEecCCCceecc-cHHHHHHHHHHHhh
Confidence 0001111222899999999999998888888776 46788899999999864 46688899999993
No 86
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.76 E-value=9.1e-16 Score=110.50 Aligned_cols=239 Identities=17% Similarity=0.150 Sum_probs=162.2
Q ss_pred CceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHH-----HhhcCCCeEEeecCCCCCCCCCCC
Q 024042 25 LSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQV-----QFFAPHFNVYVPDLIFFGHSTTRS 99 (273)
Q Consensus 25 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~-----~~l~~~~~v~~~d~~g~g~s~~~~ 99 (273)
.+++.|.+..| .+++..+| ..++++|++|-.|..|-+....|..+. ..+.++|.++-+|.||+-...+..
T Consensus 22 ~~e~~V~T~~G-~v~V~V~G----d~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~fcv~HV~~PGqe~gAp~~ 96 (326)
T KOG2931|consen 22 CQEHDVETAHG-VVHVTVYG----DPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEHFCVYHVDAPGQEDGAPSF 96 (326)
T ss_pred ceeeeeccccc-cEEEEEec----CCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhheEEEecCCCccccCCccC
Confidence 67888888666 57888877 445578999999999988845466553 455566999999999986654332
Q ss_pred c----cccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcch---HHHh----h
Q 024042 100 I----QRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDN---EALV----K 168 (273)
Q Consensus 100 ~----~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~---~~~~----~ 168 (273)
+ ..+.++.++++..++++++.+.++-+|.-.|+++..++|..+|++|-++|++++......... ..+. .
T Consensus 97 p~~y~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwiew~~~K~~s~~l~ 176 (326)
T KOG2931|consen 97 PEGYPYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWIEWAYNKVSSNLLY 176 (326)
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHHHHHHHHHHHHHHH
Confidence 2 248999999999999999999999999999999999999999999999999998655433211 1111 0
Q ss_pred hhhh----------hhhhhccCCCChHHHHHH----------------hhhhhccCC-CCChhhHHhhhhccEEEEecCC
Q 024042 169 RANL----------ERIDHLMLPESASQLRTL----------------TGLAVSKNL-DIVPDFFFNDFVHDVLIVWGDQ 221 (273)
Q Consensus 169 ~~~~----------~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~-~~~~~~~~~~~~~p~l~i~g~~ 221 (273)
..+. ..+.........+...++ +.....+.. ..........+.+|+|++.|+.
T Consensus 177 ~~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vllvvGd~ 256 (326)
T KOG2931|consen 177 YYGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVLLVVGDN 256 (326)
T ss_pred hhchhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEEEEecCC
Confidence 0000 001111111122222221 111111110 0001111125567999999999
Q ss_pred CCCCChHHHHHHHHHh-cCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhc
Q 024042 222 DQIFPLKMATELKELL-GKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 222 D~~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
.+.+ +.+..+..++ +.+..+..+.++|-.+..++|..+.+.+.-|++
T Consensus 257 Sp~~--~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~Flq 304 (326)
T KOG2931|consen 257 SPHV--SAVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQ 304 (326)
T ss_pred Cchh--hhhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHc
Confidence 8764 4555666666 356788889999999999999999999998886
No 87
>PRK10115 protease 2; Provisional
Probab=99.74 E-value=2.4e-16 Score=132.21 Aligned_cols=219 Identities=12% Similarity=-0.011 Sum_probs=135.4
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch-hHhHHHHHHhh-cCCCeEEeecCCCCCCCCC------
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA-IWQWRKQVQFF-APHFNVYVPDLIFFGHSTT------ 97 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~-~~~~~~~~~~l-~~~~~v~~~d~~g~g~s~~------ 97 (273)
+..+++..||.++.++..-.+....+++.|+||++||..+.. ...|......| .++|.|+.++.||-|.-..
T Consensus 417 e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g 496 (686)
T PRK10115 417 EHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDG 496 (686)
T ss_pred EEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhh
Confidence 445566679999987433212111245669999999965544 22344444444 4459999999998554321
Q ss_pred --CCccccHHHHHHHHHHHHHHh--CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhh
Q 024042 98 --RSIQRTELFQAASLGKLLEKI--GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLE 173 (273)
Q Consensus 98 --~~~~~~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~ 173 (273)
.....+.++.++.+..+++.- +.+++.+.|.|.||.++..++.++|++++++|...|..++.......-... ...
T Consensus 497 ~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~~~p~-~~~ 575 (686)
T PRK10115 497 KFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDESIPL-TTG 575 (686)
T ss_pred hhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcccCCCCC-Chh
Confidence 111235555555555555432 347899999999999999999999999999999999877542210000000 000
Q ss_pred hhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhcc-EEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEe---
Q 024042 174 RIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHD-VLIVWGDQDQIFPLKMATELKELL---GKKARLEII--- 246 (273)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~--- 246 (273)
.....-.+........+. ...|-...+++..| +|+++|.+|..||+.++.++..++ +.+.+++++
T Consensus 576 ~~~e~G~p~~~~~~~~l~--------~~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~ 647 (686)
T PRK10115 576 EFEEWGNPQDPQYYEYMK--------SYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTD 647 (686)
T ss_pred HHHHhCCCCCHHHHHHHH--------HcCchhccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEec
Confidence 111111222222111111 11344444555568 567799999999999999988887 345677777
Q ss_pred CCCCCCc
Q 024042 247 ENTSHVP 253 (273)
Q Consensus 247 ~~~gH~~ 253 (273)
+++||..
T Consensus 648 ~~~GHg~ 654 (686)
T PRK10115 648 MDSGHGG 654 (686)
T ss_pred CCCCCCC
Confidence 8999984
No 88
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.73 E-value=6.5e-17 Score=111.95 Aligned_cols=156 Identities=17% Similarity=0.216 Sum_probs=100.7
Q ss_pred EEEEcCCCCchhHhHHHHH-HhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEeccchHHH
Q 024042 57 LVLIHGFGPEAIWQWRKQV-QFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVA 135 (273)
Q Consensus 57 vi~~hG~~~~~~~~~~~~~-~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a 135 (273)
|+++||++++....|.... +.+...++|-.+++ ...+.++..+.+.+.+...+ +++++||||+|+..+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~~~V~~~~~----------~~P~~~~W~~~l~~~i~~~~-~~~ilVaHSLGc~~~ 69 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENSVRVEQPDW----------DNPDLDEWVQALDQAIDAID-EPTILVAHSLGCLTA 69 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTSEEEEEC------------TS--HHHHHHHHHHCCHC-T-TTEEEEEETHHHHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCCeEEecccc----------CCCCHHHHHHHHHHHHhhcC-CCeEEEEeCHHHHHH
Confidence 6899999988867777665 55655577776665 11255666666666666543 679999999999999
Q ss_pred HHHH-HhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccE
Q 024042 136 YHMA-RMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDV 214 (273)
Q Consensus 136 ~~~a-~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 214 (273)
+.++ .....+|+++++++|+...... ........ ........+..|.
T Consensus 70 l~~l~~~~~~~v~g~lLVAp~~~~~~~--------~~~~~~~~------------------------f~~~p~~~l~~~~ 117 (171)
T PF06821_consen 70 LRWLAEQSQKKVAGALLVAPFDPDDPE--------PFPPELDG------------------------FTPLPRDPLPFPS 117 (171)
T ss_dssp HHHHHHTCCSSEEEEEEES--SCGCHH--------CCTCGGCC------------------------CTTSHCCHHHCCE
T ss_pred HHHHhhcccccccEEEEEcCCCccccc--------chhhhccc------------------------cccCcccccCCCe
Confidence 9999 6777889999999987542000 00000000 0000111222377
Q ss_pred EEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCC
Q 024042 215 LIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIEN 257 (273)
Q Consensus 215 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 257 (273)
+++.+++|+++|.+.++.+++.+ +++++.++++||+.-.+.
T Consensus 118 ~viaS~nDp~vp~~~a~~~A~~l--~a~~~~~~~~GHf~~~~G 158 (171)
T PF06821_consen 118 IVIASDNDPYVPFERAQRLAQRL--GAELIILGGGGHFNAASG 158 (171)
T ss_dssp EEEEETTBSSS-HHHHHHHHHHH--T-EEEEETS-TTSSGGGT
T ss_pred EEEEcCCCCccCHHHHHHHHHHc--CCCeEECCCCCCcccccC
Confidence 99999999999999999999999 789999999999976543
No 89
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.73 E-value=1.4e-16 Score=117.68 Aligned_cols=210 Identities=13% Similarity=0.173 Sum_probs=132.5
Q ss_pred CeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCc-cEEEEEeccch
Q 024042 55 PSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVE-RFSVVGTSYGG 132 (273)
Q Consensus 55 ~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~l~G~S~Gg 132 (273)
++|+++|+.+++. ..|..+++.+... +.|+.++.+|.+ .......++++.++...+.+.....+ ++.|+|||+||
T Consensus 1 ~~lf~~p~~gG~~-~~y~~la~~l~~~~~~v~~i~~~~~~--~~~~~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg 77 (229)
T PF00975_consen 1 RPLFCFPPAGGSA-SSYRPLARALPDDVIGVYGIEYPGRG--DDEPPPDSIEELASRYAEAIRARQPEGPYVLAGWSFGG 77 (229)
T ss_dssp -EEEEESSTTCSG-GGGHHHHHHHTTTEEEEEEECSTTSC--TTSHEESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHH
T ss_pred CeEEEEcCCccCH-HHHHHHHHhCCCCeEEEEEEecCCCC--CCCCCCCCHHHHHHHHHHHhhhhCCCCCeeehccCccH
Confidence 4799999999998 9999999999998 999999999988 33344568999999888888877665 99999999999
Q ss_pred HHHHHHHHhC---CcccceEEEecCCCCCCCcchHHHhhhhh--hhhhhhcc-----CCCChHHHHHHhhhhhccCCCCC
Q 024042 133 FVAYHMARMW---PERVEKVVIASSGVNMKRGDNEALVKRAN--LERIDHLM-----LPESASQLRTLTGLAVSKNLDIV 202 (273)
Q Consensus 133 ~~a~~~a~~~---~~~v~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 202 (273)
.+|..+|.+. ...+..++++++..+.............. ...+.... ................... ...
T Consensus 78 ~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 156 (229)
T PF00975_consen 78 ILAFEMARQLEEAGEEVSRLILIDSPPPSIKERPRSREPSDEQFIEELRRIGGTPDASLEDEELLARLLRALRDDF-QAL 156 (229)
T ss_dssp HHHHHHHHHHHHTT-SESEEEEESCSSTTCHSCHHHHHCHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHH-HHH
T ss_pred HHHHHHHHHHHHhhhccCceEEecCCCCCcccchhhhhhhHHHHHHHHHHhcCCchhhhcCHHHHHHHHHHHHHHH-HHH
Confidence 9999999764 33588999999765433211111110000 00000000 0001101111111100000 000
Q ss_pred hhhHHhhh---hccEEEEecCCCCCCChH---HHHHHHHHhcCCcEEEEeCCCCCCcCcC-ChhhHHHHHHHHh
Q 024042 203 PDFFFNDF---VHDVLIVWGDQDQIFPLK---MATELKELLGKKARLEIIENTSHVPQIE-NPGLFNSIVKNFL 269 (273)
Q Consensus 203 ~~~~~~~~---~~p~l~i~g~~D~~~~~~---~~~~~~~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl 269 (273)
........ ..|.++....+|+....+ ....|.+......+++.++ ++|+.++. +..++.+.|.++|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~v~-G~H~~~l~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 157 ENYSIRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTSGDVEVHDVP-GDHFSMLKPHVAEIAEKIAEWL 229 (229)
T ss_dssp HTCS-TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBSSSEEEEEES-SETTGHHSTTHHHHHHHHHHHH
T ss_pred hhccCCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcCCCcEEEEEc-CCCcEecchHHHHHHHHHhccC
Confidence 00000000 226788888888887766 3444666665567888888 79998876 6678888888775
No 90
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.72 E-value=1e-15 Score=114.59 Aligned_cols=234 Identities=18% Similarity=0.192 Sum_probs=148.0
Q ss_pred CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchh--H--------hHHHHH---HhhcCC-CeEEeecCCCCC-CCCCC
Q 024042 34 DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAI--W--------QWRKQV---QFFAPH-FNVYVPDLIFFG-HSTTR 98 (273)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~--~--------~~~~~~---~~l~~~-~~v~~~d~~g~g-~s~~~ 98 (273)
++..+.|..+|..+ .....+|+++|++.++.. . -|..++ +.+.-. |-||+.|..|.. .|+.+
T Consensus 34 ~~~~vay~T~Gtln---~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP 110 (368)
T COG2021 34 SDARVAYETYGTLN---AEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGP 110 (368)
T ss_pred cCcEEEEEeccccc---ccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCC
Confidence 45668899998322 244568999999987551 1 233333 234444 999999999865 33332
Q ss_pred C-------------ccccHHHHHHHHHHHHHHhCCccEE-EEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcc--
Q 024042 99 S-------------IQRTELFQAASLGKLLEKIGVERFS-VVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGD-- 162 (273)
Q Consensus 99 ~-------------~~~~~~~~~~~~~~~~~~~~~~~i~-l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~-- 162 (273)
. +..++.+++..-..++++++++++. ++|-||||+.|+.++..+|+++..++.+++........
T Consensus 111 ~s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia 190 (368)
T COG2021 111 SSINPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIA 190 (368)
T ss_pred CCcCCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHH
Confidence 1 2357778888888899999999976 89999999999999999999999999998765443221
Q ss_pred hHHHhhhhh----------------------------------hhhhhhccCC------CC----hHHHHHHhhhh---h
Q 024042 163 NEALVKRAN----------------------------------LERIDHLMLP------ES----ASQLRTLTGLA---V 195 (273)
Q Consensus 163 ~~~~~~~~~----------------------------------~~~~~~~~~~------~~----~~~~~~~~~~~---~ 195 (273)
........- ...+...+.. .. ......++... +
T Consensus 191 ~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf 270 (368)
T COG2021 191 FNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKF 270 (368)
T ss_pred HHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHH
Confidence 000000000 0000000000 00 00111110000 0
Q ss_pred ------------------ccC--CCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcE-EEEe-CCCCCCc
Q 024042 196 ------------------SKN--LDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKAR-LEII-ENTSHVP 253 (273)
Q Consensus 196 ------------------~~~--~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~-~~~~-~~~gH~~ 253 (273)
++. ........++.+..|++++.-+.|.+.|++..+.+.+.+ +... ++++ ...||..
T Consensus 271 ~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L-~~~~~~~~i~S~~GHDa 349 (368)
T COG2021 271 VARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEAL-PAAGALREIDSPYGHDA 349 (368)
T ss_pred HhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhc-cccCceEEecCCCCchh
Confidence 000 000111224445559999999999999999999999999 4444 6555 3479998
Q ss_pred CcCChhhHHHHHHHHhcc
Q 024042 254 QIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 254 ~~~~~~~~~~~i~~fl~~ 271 (273)
++...+.+...|.+||+.
T Consensus 350 FL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 350 FLVESEAVGPLIRKFLAL 367 (368)
T ss_pred hhcchhhhhHHHHHHhhc
Confidence 888788898999999975
No 91
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.72 E-value=1.6e-16 Score=124.40 Aligned_cols=108 Identities=15% Similarity=0.190 Sum_probs=83.0
Q ss_pred CCCCCeEEEEcCCCCch-hHhHHH-HHHhhc--C-CCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHh------C
Q 024042 51 TLKKPSLVLIHGFGPEA-IWQWRK-QVQFFA--P-HFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKI------G 119 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~-~~~~~~-~~~~l~--~-~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~------~ 119 (273)
+..+|++|++||++.+. ...|.. +...|. . +++|+++|++|+|.+..+.........++++.++++.+ +
T Consensus 38 n~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~ 117 (442)
T TIGR03230 38 NHETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYP 117 (442)
T ss_pred CCCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCC
Confidence 35679999999998653 145665 555442 2 49999999999998876543334455566666666654 3
Q ss_pred CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCC
Q 024042 120 VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNM 158 (273)
Q Consensus 120 ~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~ 158 (273)
.++++|+||||||++|..++...|++|.++++++|..+.
T Consensus 118 l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP~ 156 (442)
T TIGR03230 118 WDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGPT 156 (442)
T ss_pred CCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCCc
Confidence 589999999999999999999999999999999997654
No 92
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.71 E-value=7.1e-16 Score=107.86 Aligned_cols=179 Identities=20% Similarity=0.264 Sum_probs=108.5
Q ss_pred EEEEcCCCCchhHhHH--HHHHhhcCC---CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEeccc
Q 024042 57 LVLIHGFGPEAIWQWR--KQVQFFAPH---FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYG 131 (273)
Q Consensus 57 vi~~hG~~~~~~~~~~--~~~~~l~~~---~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~G 131 (273)
|+++||+.++. .... .+.+.+.+. ..+..+|++ .......+.+.++++....+.+.|+|.|+|
T Consensus 2 ilYlHGF~Ssp-~S~Ka~~l~~~~~~~~~~~~~~~p~l~-----------~~p~~a~~~l~~~i~~~~~~~~~liGSSlG 69 (187)
T PF05728_consen 2 ILYLHGFNSSP-QSFKAQALKQYFAEHGPDIQYPCPDLP-----------PFPEEAIAQLEQLIEELKPENVVLIGSSLG 69 (187)
T ss_pred eEEecCCCCCC-CCHHHHHHHHHHHHhCCCceEECCCCC-----------cCHHHHHHHHHHHHHhCCCCCeEEEEEChH
Confidence 89999998877 3332 334445432 566777765 345566777888888887777999999999
Q ss_pred hHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhcc--CCCChHHHHHHhhhhhccCCCCChhhHHhh
Q 024042 132 GFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLM--LPESASQLRTLTGLAVSKNLDIVPDFFFND 209 (273)
Q Consensus 132 g~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (273)
|..|..++.+++ +++ |+++|...+.... ....+.......- ................. ...
T Consensus 70 G~~A~~La~~~~--~~a-vLiNPav~p~~~l----~~~iG~~~~~~~~e~~~~~~~~~~~l~~l~~~----------~~~ 132 (187)
T PF05728_consen 70 GFYATYLAERYG--LPA-VLINPAVRPYELL----QDYIGEQTNPYTGESYELTEEHIEELKALEVP----------YPT 132 (187)
T ss_pred HHHHHHHHHHhC--CCE-EEEcCCCCHHHHH----HHhhCccccCCCCccceechHhhhhcceEecc----------ccC
Confidence 999999999885 555 8899987754321 1111110000000 00000111110000000 011
Q ss_pred hhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhc
Q 024042 210 FVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 210 ~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
-..++++++++.|++++.+.+. +.. .++..++.+|++|.+ ++-++....|.+|+.
T Consensus 133 ~~~~~lvll~~~DEvLd~~~a~---~~~-~~~~~~i~~ggdH~f--~~f~~~l~~i~~f~~ 187 (187)
T PF05728_consen 133 NPERYLVLLQTGDEVLDYREAV---AKY-RGCAQIIEEGGDHSF--QDFEEYLPQIIAFLQ 187 (187)
T ss_pred CCccEEEEEecCCcccCHHHHH---HHh-cCceEEEEeCCCCCC--ccHHHHHHHHHHhhC
Confidence 1228999999999999985443 334 455666778899985 345677778888863
No 93
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.71 E-value=6.5e-15 Score=107.73 Aligned_cols=197 Identities=21% Similarity=0.146 Sum_probs=137.9
Q ss_pred eEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCc--c---
Q 024042 28 QTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSI--Q--- 101 (273)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~--~--- 101 (273)
..+..++ .++..+...| ......|.||++|++.+-. ...+.+.+.|++. |.|+++|+-+......... .
T Consensus 5 v~~~~~~-~~~~~~~a~P---~~~~~~P~VIv~hei~Gl~-~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~ 79 (236)
T COG0412 5 VTIPAPD-GELPAYLARP---AGAGGFPGVIVLHEIFGLN-PHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAEL 79 (236)
T ss_pred eEeeCCC-ceEeEEEecC---CcCCCCCEEEEEecccCCc-hHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHH
Confidence 4556645 5565544432 2233449999999988877 7889999999888 9999999876332221111 0
Q ss_pred -------ccHHHHHHHHHHHHHHhC------CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhh
Q 024042 102 -------RTELFQAASLGKLLEKIG------VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVK 168 (273)
Q Consensus 102 -------~~~~~~~~~~~~~~~~~~------~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~ 168 (273)
.+......++.+.++.+. .++|.++|+||||.+++.++.+.| .+++.+..-+........
T Consensus 80 ~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~~~------ 152 (236)
T COG0412 80 ETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADDTA------ 152 (236)
T ss_pred hhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCccc------
Confidence 112455666666666652 467999999999999999999977 688888876644322110
Q ss_pred hhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhc---CCcEEEE
Q 024042 169 RANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLG---KKARLEI 245 (273)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~ 245 (273)
...++..|+|+..|+.|..+|.+..+.+.+.+. .+.++.+
T Consensus 153 -------------------------------------~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~ 195 (236)
T COG0412 153 -------------------------------------DAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEI 195 (236)
T ss_pred -------------------------------------ccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEE
Confidence 022344499999999999999998888887772 3678899
Q ss_pred eCCCCCCcCcCC-----------hhhHHHHHHHHhcccC
Q 024042 246 IENTSHVPQIEN-----------PGLFNSIVKNFLRGSL 273 (273)
Q Consensus 246 ~~~~gH~~~~~~-----------~~~~~~~i~~fl~~~l 273 (273)
++++.|.++.+. .+.-++.+.+|+++.+
T Consensus 196 y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~ 234 (236)
T COG0412 196 YPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLL 234 (236)
T ss_pred eCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhc
Confidence 999889876432 1456677888887653
No 94
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.70 E-value=1.5e-16 Score=119.40 Aligned_cols=124 Identities=19% Similarity=0.254 Sum_probs=84.7
Q ss_pred eEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHH-HHH-hhcCC-CeEEeecCCCCCCCCCCCccccH
Q 024042 28 QTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRK-QVQ-FFAPH-FNVYVPDLIFFGHSTTRSIQRTE 104 (273)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~-~~~-~l~~~-~~v~~~d~~g~g~s~~~~~~~~~ 104 (273)
+.+...++..+.+... +.++|++|++||++++....|.. +.. .+... ++|+++|+++++.+..+......
T Consensus 17 ~~~~~~~~~~~~~~~f-------~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~ 89 (275)
T cd00707 17 QLLFADDPSSLKNSNF-------NPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNT 89 (275)
T ss_pred eEecCCChhhhhhcCC-------CCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhH
Confidence 3344334445555555 45688999999998876344543 443 44444 99999999987433322222234
Q ss_pred HHHHHHHHHHHHHh------CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCC
Q 024042 105 LFQAASLGKLLEKI------GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNM 158 (273)
Q Consensus 105 ~~~~~~~~~~~~~~------~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~ 158 (273)
....+++..+++.+ +.++++++|||+||++|..++.+++++++++++++|....
T Consensus 90 ~~v~~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 90 RVVGAELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPL 149 (275)
T ss_pred HHHHHHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCccc
Confidence 44445555555543 3478999999999999999999999999999999987654
No 95
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.69 E-value=1.1e-15 Score=108.87 Aligned_cols=225 Identities=20% Similarity=0.202 Sum_probs=141.1
Q ss_pred CCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCC----Ccc-------
Q 024042 33 DDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTR----SIQ------- 101 (273)
Q Consensus 33 ~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~----~~~------- 101 (273)
.+|.+|..|..-|. ...++.|.||-.||+++.. ..|..+..+-..+|.|+.+|.||.|.|... +..
T Consensus 64 ~~g~rI~gwlvlP~--~~~~~~P~vV~fhGY~g~~-g~~~~~l~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~m 140 (321)
T COG3458 64 YGGARIKGWLVLPR--HEKGKLPAVVQFHGYGGRG-GEWHDMLHWAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFM 140 (321)
T ss_pred cCCceEEEEEEeec--ccCCccceEEEEeeccCCC-CCccccccccccceeEEEEecccCCCccccCCCCCCCCcCCcee
Confidence 37888887776532 2236789999999999998 788788877777899999999999988421 110
Q ss_pred ----------ccHHHHHHHHHHHHHH------hCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHH
Q 024042 102 ----------RTELFQAASLGKLLEK------IGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEA 165 (273)
Q Consensus 102 ----------~~~~~~~~~~~~~~~~------~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~ 165 (273)
+-......|+..+++. .+.++|.+.|.|.||.+++.++...| ++++++.+-|...........
T Consensus 141 trGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~df~r~i~~ 219 (321)
T COG3458 141 TRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLSDFPRAIEL 219 (321)
T ss_pred EeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccccccccchhheee
Confidence 1111122233333332 24589999999999999999998875 699999888866543221110
Q ss_pred HhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEE
Q 024042 166 LVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEI 245 (273)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 245 (273)
........+...+....+....-+....+. .-..+..++..|+|+..|-.|+++|+...-..++++...+++.+
T Consensus 220 -~~~~~ydei~~y~k~h~~~e~~v~~TL~yf-----D~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~i 293 (321)
T COG3458 220 -ATEGPYDEIQTYFKRHDPKEAEVFETLSYF-----DIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEI 293 (321)
T ss_pred -cccCcHHHHHHHHHhcCchHHHHHHHHhhh-----hhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccCCceEEE
Confidence 000000111111111111111111111111 12334566777999999999999999999999999977788888
Q ss_pred eCCCCCCcCcCChhhHHHHHHHHhc
Q 024042 246 IENTSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 246 ~~~~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
++.-+|... |....+.+..|++
T Consensus 294 y~~~aHe~~---p~~~~~~~~~~l~ 315 (321)
T COG3458 294 YPYFAHEGG---PGFQSRQQVHFLK 315 (321)
T ss_pred eeccccccC---cchhHHHHHHHHH
Confidence 887778643 3333444555554
No 96
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.67 E-value=4.3e-14 Score=107.32 Aligned_cols=235 Identities=17% Similarity=0.072 Sum_probs=136.8
Q ss_pred eeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch----hHhHHHHHHhhcCC--CeEEeecCCCCCCCCCCCc
Q 024042 27 SQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA----IWQWRKQVQFFAPH--FNVYVPDLIFFGHSTTRSI 100 (273)
Q Consensus 27 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~----~~~~~~~~~~l~~~--~~v~~~d~~g~g~s~~~~~ 100 (273)
...+.......+..+.+.|.........|.|||+||+|..- ...|..+...++.. ..|+++|||--.+...+.
T Consensus 63 ~~dv~~~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~Pa- 141 (336)
T KOG1515|consen 63 SKDVTIDPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFPA- 141 (336)
T ss_pred eeeeEecCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCCc-
Confidence 35555554445566666554444346889999999976221 25677777777554 889999999655544443
Q ss_pred cccHHHHHHHHHHHHHH------hCCccEEEEEeccchHHHHHHHHhC------CcccceEEEecCCCCCCCcchHHHhh
Q 024042 101 QRTELFQAASLGKLLEK------IGVERFSVVGTSYGGFVAYHMARMW------PERVEKVVIASSGVNMKRGDNEALVK 168 (273)
Q Consensus 101 ~~~~~~~~~~~~~~~~~------~~~~~i~l~G~S~Gg~~a~~~a~~~------~~~v~~~v~~~~~~~~~~~~~~~~~~ 168 (273)
..++..+.+..+.++ .+.++++|+|-|.||.+|..++.+. +.++++.|++-|..............
T Consensus 142 --~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~ 219 (336)
T KOG1515|consen 142 --AYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQ 219 (336)
T ss_pred --cchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHH
Confidence 344444444444442 2558899999999999999988753 34699999999988765443322221
Q ss_pred hhhhhhhhhccCCCChHHHHHHhhhhh------ccCCCCChhh------HHhhhhccEEEEecCCCCCCChHHHHHHHHH
Q 024042 169 RANLERIDHLMLPESASQLRTLTGLAV------SKNLDIVPDF------FFNDFVHDVLIVWGDQDQIFPLKMATELKEL 236 (273)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~------~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~ 236 (273)
..... ..........++.... .......+.. ..-....|++++.++.|.+. +....++++
T Consensus 220 ~~~~~------~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L~--D~~~~Y~~~ 291 (336)
T KOG1515|consen 220 NLNGS------PELARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVLR--DEGLAYAEK 291 (336)
T ss_pred hhcCC------cchhHHHHHHHHHHhCCCCCCCcCCccccccccccccCccccCCCceEEEEeCchhhh--hhhHHHHHH
Confidence 11100 0111111111111000 0000001110 11112227999999999885 334444444
Q ss_pred h---cCCcEEEEeCCCCCCcCcC-----ChhhHHHHHHHHhccc
Q 024042 237 L---GKKARLEIIENTSHVPQIE-----NPGLFNSIVKNFLRGS 272 (273)
Q Consensus 237 ~---~~~~~~~~~~~~gH~~~~~-----~~~~~~~~i~~fl~~~ 272 (273)
+ +.++++..++++.|.++.- ...++.+.+.+|+++.
T Consensus 292 Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 292 LKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred HHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 3 3667777899999976543 3347778888888764
No 97
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.66 E-value=1.2e-13 Score=107.39 Aligned_cols=217 Identities=12% Similarity=0.132 Sum_probs=140.1
Q ss_pred CCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEeccchH
Q 024042 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGF 133 (273)
Q Consensus 54 ~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~ 133 (273)
.|+|+++..+.+.....-+.+++.|-+++.|+..|+..-+.........+++++++.+.+.+++++.+ ++++|+|+||.
T Consensus 102 ~~pvLiV~Pl~g~~~~L~RS~V~~Ll~g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~G~~-v~l~GvCqgG~ 180 (406)
T TIGR01849 102 GPAVLIVAPMSGHYATLLRSTVEALLPDHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFLGPD-IHVIAVCQPAV 180 (406)
T ss_pred CCcEEEEcCCchHHHHHHHHHHHHHhCCCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHhCCC-CcEEEEchhhH
Confidence 37899998887666344566777776799999999986665544455678899999999999999877 99999999999
Q ss_pred HHHHHHHhC-----CcccceEEEecCCCCCCCc-c-hHHHhhhhhhhhhhhc-------------------------c--
Q 024042 134 VAYHMARMW-----PERVEKVVIASSGVNMKRG-D-NEALVKRANLERIDHL-------------------------M-- 179 (273)
Q Consensus 134 ~a~~~a~~~-----~~~v~~~v~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~-------------------------~-- 179 (273)
+++.+++.. |.+++++++++++.+.... . ...+........+... +
T Consensus 181 ~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~~~F~~ 260 (406)
T TIGR01849 181 PVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQLAGFIS 260 (406)
T ss_pred HHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHHHHHHH
Confidence 877666544 6679999999999887653 1 1111110000000000 0
Q ss_pred -CCCC-hHHHHHHhhhh-----------------hccCCCCChhhH---------------------------Hhhhh-c
Q 024042 180 -LPES-ASQLRTLTGLA-----------------VSKNLDIVPDFF---------------------------FNDFV-H 212 (273)
Q Consensus 180 -~~~~-~~~~~~~~~~~-----------------~~~~~~~~~~~~---------------------------~~~~~-~ 212 (273)
.+.. ......+.... +... ...+..+ ..++. +
T Consensus 261 mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~-~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~Vdl~~I~~~ 339 (406)
T TIGR01849 261 MNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAV-MDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKRVDPGAITRV 339 (406)
T ss_pred cCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhc-cCCcHHHHHHHHHHHHHhCCccCCcEEECCEEecHHHCccc
Confidence 0000 00000000000 0000 1111111 22333 3
Q ss_pred cEEEEecCCCCCCChHHHHHHHHHh---c-CCcEEEEeCCCCCCcCc---CChhhHHHHHHHHhccc
Q 024042 213 DVLIVWGDQDQIFPLKMATELKELL---G-KKARLEIIENTSHVPQI---ENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 213 p~l~i~g~~D~~~~~~~~~~~~~~~---~-~~~~~~~~~~~gH~~~~---~~~~~~~~~i~~fl~~~ 272 (273)
|+|.+.|++|.++|+.+++.+.+.+ + .+.+.+..+++||...+ ..++++...|.+||.++
T Consensus 340 pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 340 ALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRRN 406 (406)
T ss_pred ceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHhC
Confidence 9999999999999999999998875 3 34557777789998654 34578899999999764
No 98
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.65 E-value=6.1e-15 Score=109.58 Aligned_cols=129 Identities=23% Similarity=0.394 Sum_probs=103.0
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcC--------C--CeEEeecCCCCCCC
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAP--------H--FNVYVPDLIFFGHS 95 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~--------~--~~v~~~d~~g~g~s 95 (273)
.+...++ .|.++|+....++.......-.+++++|||+++- ..+-.+++.|.. . |.|+++.+||+|.|
T Consensus 125 ~qykTeI-eGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv-~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwS 202 (469)
T KOG2565|consen 125 KQYKTEI-EGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSV-REFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWS 202 (469)
T ss_pred hhhhhhh-cceeEEEEEecCCccccCCcccceEEecCCCchH-HHHHhhhhhhcCccccCCccceeEEEeccCCCCcccC
Confidence 3444455 8999999887644333344456899999999999 777777776643 2 79999999999999
Q ss_pred CCCCc-cccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCC
Q 024042 96 TTRSI-QRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGV 156 (273)
Q Consensus 96 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~ 156 (273)
+.+.. .....+.+..++.++-+++.+++.+-|-.+|+.++..+|..+|++|.|+-+-.+..
T Consensus 203 d~~sk~GFn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~~~ 264 (469)
T KOG2565|consen 203 DAPSKTGFNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMCFV 264 (469)
T ss_pred cCCccCCccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhccccc
Confidence 97754 45777788889999999999999999999999999999999999998876644433
No 99
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.65 E-value=1.4e-14 Score=119.75 Aligned_cols=124 Identities=16% Similarity=0.101 Sum_probs=92.2
Q ss_pred ecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhH---hH-HHHHHhhcC-CCeEEeecCCCCCCCCCCCccccHH
Q 024042 31 DIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIW---QW-RKQVQFFAP-HFNVYVPDLIFFGHSTTRSIQRTEL 105 (273)
Q Consensus 31 ~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~---~~-~~~~~~l~~-~~~v~~~d~~g~g~s~~~~~~~~~~ 105 (273)
+..||.+|++..+.|+ ..++.|+||++||++.+. . .+ ......|.+ +|.|+++|+||+|.|........ .
T Consensus 2 ~~~DG~~L~~~~~~P~---~~~~~P~Il~~~gyg~~~-~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~-~ 76 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPA---GGGPVPVILSRTPYGKDA-GLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLG-S 76 (550)
T ss_pred cCCCCCEEEEEEEecC---CCCCCCEEEEecCCCCch-hhccccccccHHHHHhCCcEEEEEeccccccCCCceEecC-c
Confidence 4568999998776532 234679999999998764 2 11 123344544 59999999999999987644333 4
Q ss_pred HHHHHHHHHHHHhC-----CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCC
Q 024042 106 FQAASLGKLLEKIG-----VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMK 159 (273)
Q Consensus 106 ~~~~~~~~~~~~~~-----~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~ 159 (273)
..++|+.++++.+. ..+++++|+|+||.+++.+|..+|+.+++++..++..+..
T Consensus 77 ~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~~ 135 (550)
T TIGR00976 77 DEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDLY 135 (550)
T ss_pred ccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccchh
Confidence 55667777776652 2589999999999999999999999999999988776543
No 100
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.65 E-value=1.1e-14 Score=101.45 Aligned_cols=233 Identities=15% Similarity=0.098 Sum_probs=138.8
Q ss_pred eEEecCCcceEEeecCCccCCCCCCCCC-eEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCcc---c
Q 024042 28 QTIDIDDETTLHFWGPKLEDDHKTLKKP-SLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQ---R 102 (273)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~-~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~---~ 102 (273)
..+..+||..+....++ .+++.+ .++.-.+.+... ..|++++...++. |.|+.+|+||.|+|...... .
T Consensus 8 ~~l~~~DG~~l~~~~~p-----A~~~~~g~~~va~a~Gv~~-~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~ 81 (281)
T COG4757 8 AHLPAPDGYSLPGQRFP-----ADGKASGRLVVAGATGVGQ-YFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQW 81 (281)
T ss_pred cccccCCCccCcccccc-----CCCCCCCcEEecccCCcch-hHhHHHHHHhhccCceEEEEecccccCCCccccccCcc
Confidence 34667799999888885 233333 455555566665 8899999988887 99999999999999876543 2
Q ss_pred cHHHHH-HHHHHHH----HHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHH----hhhhh--
Q 024042 103 TELFQA-ASLGKLL----EKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEAL----VKRAN-- 171 (273)
Q Consensus 103 ~~~~~~-~~~~~~~----~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~----~~~~~-- 171 (273)
...+.+ .|+...+ +.+...+...+|||+||++.-.+.+. + +..+....+.+........... ....+
T Consensus 82 ~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~~~-~-k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv 159 (281)
T COG4757 82 RYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLGQH-P-KYAAFAVFGSGAGWSGWMGLRERLGAVLLWNLV 159 (281)
T ss_pred chhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeecccccC-c-ccceeeEeccccccccchhhhhcccceeecccc
Confidence 222221 2333333 33345789999999999887666554 3 4555554444333222110000 00000
Q ss_pred ---hh----hhhhccC----CCChHHHHH---Hhhhhhc--c-CCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHH
Q 024042 172 ---LE----RIDHLML----PESASQLRT---LTGLAVS--K-NLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELK 234 (273)
Q Consensus 172 ---~~----~~~~~~~----~~~~~~~~~---~~~~~~~--~-~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~ 234 (273)
.. .+...+. ......++. +.+...+ . .......+.++.+..|++.+...+|+.+|+...+.+.
T Consensus 160 ~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~ 239 (281)
T COG4757 160 GPPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFA 239 (281)
T ss_pred ccchhhccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHH
Confidence 00 0000000 111122222 2222211 1 1111234556777779999999999999999999998
Q ss_pred HHhcCCc--EEEEeCC----CCCCcCcCCh-hhHHHHHHHHh
Q 024042 235 ELLGKKA--RLEIIEN----TSHVPQIENP-GLFNSIVKNFL 269 (273)
Q Consensus 235 ~~~~~~~--~~~~~~~----~gH~~~~~~~-~~~~~~i~~fl 269 (273)
+.. .++ +...++. .||+....++ |.+.+.+.+|+
T Consensus 240 ~~y-~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 240 SFY-RNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred Hhh-hcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 887 444 4444443 5999877777 78888888876
No 101
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.63 E-value=1.8e-13 Score=96.29 Aligned_cols=223 Identities=17% Similarity=0.251 Sum_probs=119.2
Q ss_pred eeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCC-CCCCCCCccccH
Q 024042 27 SQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFF-GHSTTRSIQRTE 104 (273)
Q Consensus 27 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~-g~s~~~~~~~~~ 104 (273)
.+-+.+.+|.+++.|+..|++. ...+.++||+.+|++... ..+..++.+|+.+ |+|+.+|--.| |.|++....+++
T Consensus 4 dhvi~~~~~~~I~vwet~P~~~-~~~~~~tiliA~Gf~rrm-dh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~eftm 81 (294)
T PF02273_consen 4 DHVIRLEDGRQIRVWETRPKNN-EPKRNNTILIAPGFARRM-DHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINEFTM 81 (294)
T ss_dssp EEEEEETTTEEEEEEEE---TT-S---S-EEEEE-TT-GGG-GGGHHHHHHHHTTT--EEEE---B-------------H
T ss_pred cceeEcCCCCEEEEeccCCCCC-CcccCCeEEEecchhHHH-HHHHHHHHHHhhCCeEEEeccccccccCCCCChhhcch
Confidence 3567788999999999886543 234568999999999888 9999999999988 99999998765 888888878888
Q ss_pred HHHHHHHHHHHHHh---CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhcc--
Q 024042 105 LFQAASLGKLLEKI---GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLM-- 179 (273)
Q Consensus 105 ~~~~~~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 179 (273)
....+++..+++.+ +..++.|+.-|+.|-+|+..+.+- .+.-+|...+..++.. .+.+......+....
T Consensus 82 s~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVVnlr~----TLe~al~~Dyl~~~i~~ 155 (294)
T PF02273_consen 82 SIGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVVNLRD----TLEKALGYDYLQLPIEQ 155 (294)
T ss_dssp HHHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEES--S-HHH----HHHHHHSS-GGGS-GGG
T ss_pred HHhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeeeeHHH----HHHHHhccchhhcchhh
Confidence 77777766666554 778999999999999999999864 3777777776665432 222222111111100
Q ss_pred CCCCh------HHHHHHhhhhhccCCC--CChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhc-CCcEEEEeCCCC
Q 024042 180 LPESA------SQLRTLTGLAVSKNLD--IVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLG-KKARLEIIENTS 250 (273)
Q Consensus 180 ~~~~~------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~g 250 (273)
.+... -....+....+..... .......+++..|++.+++.+|.+|....+..+.+..+ ..++++.++|++
T Consensus 156 lp~dldfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~ 235 (294)
T PF02273_consen 156 LPEDLDFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSS 235 (294)
T ss_dssp --SEEEETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-S
T ss_pred CCCcccccccccchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCcc
Confidence 00000 0001111111111111 12233455667799999999999999999888888663 678899999999
Q ss_pred CCcCcCCh
Q 024042 251 HVPQIENP 258 (273)
Q Consensus 251 H~~~~~~~ 258 (273)
|... |++
T Consensus 236 HdL~-enl 242 (294)
T PF02273_consen 236 HDLG-ENL 242 (294)
T ss_dssp S-TT-SSH
T ss_pred chhh-hCh
Confidence 9863 444
No 102
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.63 E-value=5.4e-15 Score=107.77 Aligned_cols=189 Identities=20% Similarity=0.150 Sum_probs=100.3
Q ss_pred EEEEcCCCCch--hHhHHHHHHhhcC--CCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHH-----hCCccEEEEE
Q 024042 57 LVLIHGFGPEA--IWQWRKQVQFFAP--HFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEK-----IGVERFSVVG 127 (273)
Q Consensus 57 vi~~hG~~~~~--~~~~~~~~~~l~~--~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~-----~~~~~i~l~G 127 (273)
||++||.+... ......+...+.+ ++.|+.+|||-..+... ....++..+.+..++++ .+.++|+++|
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~~---p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G 77 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEAPF---PAALEDVKAAYRWLLKNADKLGIDPERIVLIG 77 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTSST---THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccccccc---cccccccccceeeeccccccccccccceEEee
Confidence 79999966322 1334445555543 49999999995433221 22334444444444444 3457999999
Q ss_pred eccchHHHHHHHHhCCc----ccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhh----ccCC
Q 024042 128 TSYGGFVAYHMARMWPE----RVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAV----SKNL 199 (273)
Q Consensus 128 ~S~Gg~~a~~~a~~~~~----~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 199 (273)
+|.||.+|+.++....+ .++++++++|+.+............... ...... ............. ....
T Consensus 78 ~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 153 (211)
T PF07859_consen 78 DSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDDSNEN--KDDPFL--PAPKIDWFWKLYLPGSDRDDP 153 (211)
T ss_dssp ETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHHHHHH--STTSSS--BHHHHHHHHHHHHSTGGTTST
T ss_pred cccccchhhhhhhhhhhhcccchhhhhcccccccchhcccccccccccc--cccccc--ccccccccccccccccccccc
Confidence 99999999999976433 3899999999776611111111100000 000011 1122222111111 0001
Q ss_pred CCChhhH-HhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCCCCCcC
Q 024042 200 DIVPDFF-FNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENTSHVPQ 254 (273)
Q Consensus 200 ~~~~~~~-~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~ 254 (273)
...|... ...-..|+++++|+.|.++ +....+.+++ +.+++++++++.+|.+.
T Consensus 154 ~~sp~~~~~~~~~Pp~~i~~g~~D~l~--~~~~~~~~~L~~~gv~v~~~~~~g~~H~f~ 210 (211)
T PF07859_consen 154 LASPLNASDLKGLPPTLIIHGEDDVLV--DDSLRFAEKLKKAGVDVELHVYPGMPHGFF 210 (211)
T ss_dssp TTSGGGSSCCTTCHEEEEEEETTSTTH--HHHHHHHHHHHHTT-EEEEEEETTEETTGG
T ss_pred ccccccccccccCCCeeeeccccccch--HHHHHHHHHHHHCCCCEEEEEECCCeEEee
Confidence 1111111 0111239999999999875 4556666665 46789999999999754
No 103
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.62 E-value=1.7e-13 Score=109.60 Aligned_cols=197 Identities=16% Similarity=0.192 Sum_probs=123.1
Q ss_pred CCCCCeEEEEcCCCCchhHhH-----HHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHh----CC
Q 024042 51 TLKKPSLVLIHGFGPEAIWQW-----RKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKI----GV 120 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~-----~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~----~~ 120 (273)
...+++||+++.+-... ..+ +.++++|.++ +.|+++|+++-+... ...+++++++.+.+.++.+ +.
T Consensus 212 ~v~~~PLLIVPp~INK~-YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~---r~~~ldDYv~~i~~Ald~V~~~tG~ 287 (560)
T TIGR01839 212 QQHARPLLVVPPQINKF-YIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH---REWGLSTYVDALKEAVDAVRAITGS 287 (560)
T ss_pred CcCCCcEEEechhhhhh-heeecCCcchHHHHHHHcCCeEEEEeCCCCChhh---cCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 34567999999976444 444 4677777666 999999999755543 2346666666665555554 66
Q ss_pred ccEEEEEeccchHHHHH----HHHhCCc-ccceEEEecCCCCCCCcch-H------HH------hhhhhh------hhhh
Q 024042 121 ERFSVVGTSYGGFVAYH----MARMWPE-RVEKVVIASSGVNMKRGDN-E------AL------VKRANL------ERID 176 (273)
Q Consensus 121 ~~i~l~G~S~Gg~~a~~----~a~~~~~-~v~~~v~~~~~~~~~~~~~-~------~~------~~~~~~------~~~~ 176 (273)
+++.++|+|+||.++.. +++++++ +|++++++.+..++..... . .+ ....+. ....
T Consensus 288 ~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~~~G~lpg~~ma~~F 367 (560)
T TIGR01839 288 RDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSYQAGVLDGSEMAKVF 367 (560)
T ss_pred CCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChHHHHHHHHHHHhcCCcCHHHHHHHH
Confidence 89999999999999886 7777775 7999999998887653220 0 00 000000 0000
Q ss_pred hccCCC--------------------------------ChHHHHHHhhhhhccCCCCCh--------hhHHhhhhccEEE
Q 024042 177 HLMLPE--------------------------------SASQLRTLTGLAVSKNLDIVP--------DFFFNDFVHDVLI 216 (273)
Q Consensus 177 ~~~~~~--------------------------------~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~p~l~ 216 (273)
..+.+. .......+. ..+..+....+ ...+.++.+|+++
T Consensus 368 ~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg~~~~e~l-~ly~~N~L~~pG~l~v~G~~idL~~I~~Pvl~ 446 (560)
T TIGR01839 368 AWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLPAAFHGDLL-DMFKSNPLTRPDALEVCGTPIDLKKVKCDSFS 446 (560)
T ss_pred HhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccchHHHHHHHH-HHHhcCCCCCCCCEEECCEEechhcCCCCeEE
Confidence 000000 001111111 11111111110 1124455569999
Q ss_pred EecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCc
Q 024042 217 VWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVP 253 (273)
Q Consensus 217 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 253 (273)
+.|++|.++|.+.+..+.+.++.+.+++..+ +||..
T Consensus 447 va~~~DHIvPw~s~~~~~~l~gs~~~fvl~~-gGHIg 482 (560)
T TIGR01839 447 VAGTNDHITPWDAVYRSALLLGGKRRFVLSN-SGHIQ 482 (560)
T ss_pred EecCcCCcCCHHHHHHHHHHcCCCeEEEecC-CCccc
Confidence 9999999999999999999986677777776 89963
No 104
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.60 E-value=2.4e-13 Score=107.89 Aligned_cols=228 Identities=19% Similarity=0.143 Sum_probs=151.6
Q ss_pred eEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch--hHh-----HHHHHHhhcCC-CeEEeecCCCCCCCCCC-
Q 024042 28 QTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA--IWQ-----WRKQVQFFAPH-FNVYVPDLIFFGHSTTR- 98 (273)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~--~~~-----~~~~~~~l~~~-~~v~~~d~~g~g~s~~~- 98 (273)
..++.+.|.+++.-.+.|.+....++-|+++++-|.++-. ... +-++ ..|+.. |.|+.+|-||.-.....
T Consensus 616 f~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~-~~LaslGy~Vv~IDnRGS~hRGlkF 694 (867)
T KOG2281|consen 616 FSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRF-CRLASLGYVVVFIDNRGSAHRGLKF 694 (867)
T ss_pred eeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhh-hhhhhcceEEEEEcCCCccccchhh
Confidence 4456778888888888887777778899999999977432 011 1222 344444 99999999986544322
Q ss_pred -------CccccHHHHHHHHHHHHHHhC---CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhh
Q 024042 99 -------SIQRTELFQAASLGKLLEKIG---VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVK 168 (273)
Q Consensus 99 -------~~~~~~~~~~~~~~~~~~~~~---~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~ 168 (273)
.....++++++.+..+.++.+ .++|.+-|||+||.++++...++|+-++.+|.-+|.............+
T Consensus 695 E~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~~YDTgYTER 774 (867)
T KOG2281|consen 695 ESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRLYDTGYTER 774 (867)
T ss_pred HHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeeeeecccchhh
Confidence 223478888999999988874 4899999999999999999999999888777766655543221111111
Q ss_pred hhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEE
Q 024042 169 RANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEI 245 (273)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~ 245 (273)
.++....... ......+...... .| +-....|++||--|+.|.......+.+.+ ++.-++++
T Consensus 775 YMg~P~~nE~--gY~agSV~~~Vek--------lp-----depnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~I 839 (867)
T KOG2281|consen 775 YMGYPDNNEH--GYGAGSVAGHVEK--------LP-----DEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQI 839 (867)
T ss_pred hcCCCccchh--cccchhHHHHHhh--------CC-----CCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEE
Confidence 1111100000 0001111111111 11 11114899999999999988888887776 57789999
Q ss_pred eCCCCCCcC-cCChhhHHHHHHHHhcc
Q 024042 246 IENTSHVPQ-IENPGLFNSIVKNFLRG 271 (273)
Q Consensus 246 ~~~~gH~~~-~~~~~~~~~~i~~fl~~ 271 (273)
+|+.-|..- .+........+..||++
T Consensus 840 fP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 840 FPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred ccccccccCCCccchhHHHHHHHHHhh
Confidence 999999853 35556777888899876
No 105
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.59 E-value=1.6e-13 Score=115.83 Aligned_cols=231 Identities=18% Similarity=0.141 Sum_probs=152.5
Q ss_pred hhCCCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch------hHhHHHHHHhhcCC-CeEEeecCCCCC
Q 024042 21 ASAGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA------IWQWRKQVQFFAPH-FNVYVPDLIFFG 93 (273)
Q Consensus 21 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~------~~~~~~~~~~l~~~-~~v~~~d~~g~g 93 (273)
.....+...+.. +|...++....|++....++-|.++.+||..++. .-.|... ..... +.|+.+|.||.|
T Consensus 494 ~~p~~~~~~i~~-~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs~ 570 (755)
T KOG2100|consen 494 ALPIVEFGKIEI-DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGSG 570 (755)
T ss_pred cCCcceeEEEEe-ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCcC
Confidence 344556777777 9999999988877766677788999999987632 1223332 23333 999999999977
Q ss_pred CCCCCC--------ccccHHHHHHHHHHHHHHh--CCccEEEEEeccchHHHHHHHHhCCcc-cceEEEecCCCCCCCcc
Q 024042 94 HSTTRS--------IQRTELFQAASLGKLLEKI--GVERFSVVGTSYGGFVAYHMARMWPER-VEKVVIASSGVNMKRGD 162 (273)
Q Consensus 94 ~s~~~~--------~~~~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~-v~~~v~~~~~~~~~~~~ 162 (273)
...... .....+++...+..+++.. +.+++.++|+|+||.+++.++...++. ++..+.++|..++.-.
T Consensus 571 ~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~y- 649 (755)
T KOG2100|consen 571 GYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLYY- 649 (755)
T ss_pred CcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeeee-
Confidence 654321 1235666666666666654 458899999999999999999998744 5566999998876521
Q ss_pred hHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccE-EEEecCCCCCCChHHHHHHHHHh---c
Q 024042 163 NEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDV-LIVWGDQDQIFPLKMATELKELL---G 238 (273)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-l~i~g~~D~~~~~~~~~~~~~~~---~ 238 (273)
........ ...+...... .. ...+......+..|. |++||+.|..|+.+++..+.+++ +
T Consensus 650 ds~~tery-------mg~p~~~~~~--y~--------e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~g 712 (755)
T KOG2100|consen 650 DSTYTERY-------MGLPSENDKG--YE--------ESSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAG 712 (755)
T ss_pred cccccHhh-------cCCCccccch--hh--------hccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCC
Confidence 11111100 0011111100 00 112222233334455 99999999999999999998887 3
Q ss_pred CCcEEEEeCCCCCCcCcCC-hhhHHHHHHHHhccc
Q 024042 239 KKARLEIIENTSHVPQIEN-PGLFNSIVKNFLRGS 272 (273)
Q Consensus 239 ~~~~~~~~~~~gH~~~~~~-~~~~~~~i~~fl~~~ 272 (273)
-..+..++|+.+|.+.... -..+...+..|+..+
T Consensus 713 v~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~ 747 (755)
T KOG2100|consen 713 VPFRLLVYPDENHGISYVEVISHLYEKLDRFLRDC 747 (755)
T ss_pred CceEEEEeCCCCcccccccchHHHHHHHHHHHHHH
Confidence 4588999999999876533 256778888888754
No 106
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.58 E-value=5.6e-13 Score=87.51 Aligned_cols=182 Identities=14% Similarity=0.128 Sum_probs=123.6
Q ss_pred CCCCCeEEEEcCCCCch-hHhHHHHHHhhcCC-CeEEeecCCCC-----CCCCCCCcc-ccHHHHHHHHHHHHHHhCCcc
Q 024042 51 TLKKPSLVLIHGFGPEA-IWQWRKQVQFFAPH-FNVYVPDLIFF-----GHSTTRSIQ-RTELFQAASLGKLLEKIGVER 122 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~-~~~~~~~~~~l~~~-~~v~~~d~~g~-----g~s~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 122 (273)
+...-+||+.||.|.+. +.....++..|+.. +.|..++++.. |...+++.. .-...+...+.++.+.+...+
T Consensus 11 g~~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gp 90 (213)
T COG3571 11 GPAPVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGP 90 (213)
T ss_pred CCCCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCc
Confidence 34455899999987655 25567778888877 99999998742 322222222 234455666777777777679
Q ss_pred EEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCC
Q 024042 123 FSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIV 202 (273)
Q Consensus 123 i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (273)
+++-|+||||-++.+++......|+++++++-++..+... +. .
T Consensus 91 Li~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKP----------------------e~---------------~ 133 (213)
T COG3571 91 LIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKP----------------------EQ---------------L 133 (213)
T ss_pred eeeccccccchHHHHHHHhhcCCcceEEEecCccCCCCCc----------------------cc---------------c
Confidence 9999999999999999987666699999988666544221 11 1
Q ss_pred hhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcC----------ChhhHHHHHHHHhcc
Q 024042 203 PDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIE----------NPGLFNSIVKNFLRG 271 (273)
Q Consensus 203 ~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~----------~~~~~~~~i~~fl~~ 271 (273)
....+..+..|++|.+|+.|++-..+.+... .+.+..++++++++.|..--. +-...++.+..|+.+
T Consensus 134 Rt~HL~gl~tPtli~qGtrD~fGtr~~Va~y--~ls~~iev~wl~~adHDLkp~k~vsgls~~~hL~~~A~~va~~~~~ 210 (213)
T COG3571 134 RTEHLTGLKTPTLITQGTRDEFGTRDEVAGY--ALSDPIEVVWLEDADHDLKPRKLVSGLSTADHLKTLAEQVAGWARR 210 (213)
T ss_pred hhhhccCCCCCeEEeecccccccCHHHHHhh--hcCCceEEEEeccCccccccccccccccHHHHHHHHHHHHHHHHhh
Confidence 1122334455999999999999877766332 234789999999999964321 223455666667653
No 107
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.58 E-value=1.1e-13 Score=100.36 Aligned_cols=176 Identities=20% Similarity=0.229 Sum_probs=111.2
Q ss_pred CCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHh-------CCc
Q 024042 50 KTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKI-------GVE 121 (273)
Q Consensus 50 ~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 121 (273)
..+.-|+|||+||+.... ..|..+++.+++. |.|+.+|+...+............+..+++.+-++.. +..
T Consensus 13 ~~g~yPVv~f~~G~~~~~-s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s 91 (259)
T PF12740_consen 13 SAGTYPVVLFLHGFLLIN-SWYSQLLEHVASHGYIVVAPDLYSIGGPDDTDEVASAAEVIDWLAKGLESKLPLGVKPDFS 91 (259)
T ss_pred CCCCcCEEEEeCCcCCCH-HHHHHHHHHHHhCceEEEEecccccCCCCcchhHHHHHHHHHHHHhcchhhcccccccccc
Confidence 356789999999999776 6799999999998 9999999765433221111123333333333322221 346
Q ss_pred cEEEEEeccchHHHHHHHHhC-----CcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhc
Q 024042 122 RFSVVGTSYGGFVAYHMARMW-----PERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVS 196 (273)
Q Consensus 122 ~i~l~G~S~Gg~~a~~~a~~~-----~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (273)
++.|.|||.||-+|..++..+ +.+++++++++|.-....... ..+ ..+..
T Consensus 92 ~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~~~---------------~~P---~v~~~------- 146 (259)
T PF12740_consen 92 KLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKGSQ---------------TEP---PVLTY------- 146 (259)
T ss_pred ceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccccccccC---------------CCC---ccccC-------
Confidence 899999999999999999887 457999999999764321100 000 00000
Q ss_pred cCCCCChhhHHhhhhccEEEEecCCCCC---------CCh-HHHHHHHHHhcCCcEEEEeCCCCCCcCcCCh
Q 024042 197 KNLDIVPDFFFNDFVHDVLIVWGDQDQI---------FPL-KMATELKELLGKKARLEIIENTSHVPQIENP 258 (273)
Q Consensus 197 ~~~~~~~~~~~~~~~~p~l~i~g~~D~~---------~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 258 (273)
.+. .-+...|+++|-.+-+.. .|. ..-+++++.+....-..+..+.||+-+++..
T Consensus 147 -----~p~--s~~~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~~p~~~~v~~~~GH~d~LDd~ 211 (259)
T PF12740_consen 147 -----TPQ--SFDFSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECKPPSWHFVAKDYGHMDFLDDD 211 (259)
T ss_pred -----ccc--ccCCCCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhcCCCEEEEEeCCCCchHhhcCC
Confidence 000 001123899887766642 222 2567787777555556667889999877655
No 108
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.57 E-value=7e-13 Score=88.86 Aligned_cols=174 Identities=11% Similarity=0.049 Sum_probs=113.2
Q ss_pred CCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEeccchH
Q 024042 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGF 133 (273)
Q Consensus 54 ~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~ 133 (273)
.+.+|++||++++....|....+.-. -.+-.+++. .......+++++.+.+.+... .++++||+||+|+.
T Consensus 2 ~~~~lIVpG~~~Sg~~HWq~~we~~l--~~a~rveq~-------~w~~P~~~dWi~~l~~~v~a~-~~~~vlVAHSLGc~ 71 (181)
T COG3545 2 MTDVLIVPGYGGSGPNHWQSRWESAL--PNARRVEQD-------DWEAPVLDDWIARLEKEVNAA-EGPVVLVAHSLGCA 71 (181)
T ss_pred CceEEEecCCCCCChhHHHHHHHhhC--ccchhcccC-------CCCCCCHHHHHHHHHHHHhcc-CCCeEEEEecccHH
Confidence 35689999998887566655443211 223333332 112236666777777666665 36799999999999
Q ss_pred HHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhcc
Q 024042 134 VAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHD 213 (273)
Q Consensus 134 ~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 213 (273)
+++.++.+....|.|+++++|+............ .. ........+.-|
T Consensus 72 ~v~h~~~~~~~~V~GalLVAppd~~~~~~~~~~~-------------------------~t-------f~~~p~~~lpfp 119 (181)
T COG3545 72 TVAHWAEHIQRQVAGALLVAPPDVSRPEIRPKHL-------------------------MT-------FDPIPREPLPFP 119 (181)
T ss_pred HHHHHHHhhhhccceEEEecCCCccccccchhhc-------------------------cc-------cCCCccccCCCc
Confidence 9999999877789999999986543321100000 00 000011122228
Q ss_pred EEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCc---CChhhHHHHHHHHhcc
Q 024042 214 VLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQI---ENPGLFNSIVKNFLRG 271 (273)
Q Consensus 214 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~---~~~~~~~~~i~~fl~~ 271 (273)
.+++.+.+|++++++.++.+++.+ ...++...++||+.-. ..-.+....+.+|+.+
T Consensus 120 s~vvaSrnDp~~~~~~a~~~a~~w--gs~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 120 SVVVASRNDPYVSYEHAEDLANAW--GSALVDVGEGGHINAESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred eeEEEecCCCCCCHHHHHHHHHhc--cHhheecccccccchhhcCCCcHHHHHHHHHHhhh
Confidence 999999999999999999999998 5677888889997532 2234555666666543
No 109
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.56 E-value=4.3e-13 Score=103.57 Aligned_cols=220 Identities=16% Similarity=0.100 Sum_probs=118.4
Q ss_pred EEeecCCccCCCCCCCCCeEEEEcCCCC---chhHhHHHHH-HhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHH
Q 024042 38 LHFWGPKLEDDHKTLKKPSLVLIHGFGP---EAIWQWRKQV-QFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLG 112 (273)
Q Consensus 38 l~~~~~~~~~~~~~~~~~~vi~~hG~~~---~~~~~~~~~~-~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~ 112 (273)
+.+..+.+ ........|+||++||.+. +. ....... ..+... +.|+++|||-..+-..+....+......++.
T Consensus 64 ~~~~~y~p-~~~~~~~~p~vly~HGGg~~~g~~-~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~~p~~~~d~~~a~~~l~ 141 (312)
T COG0657 64 VPVRVYRP-DRKAAATAPVVLYLHGGGWVLGSL-RTHDALVARLAAAAGAVVVSVDYRLAPEHPFPAALEDAYAAYRWLR 141 (312)
T ss_pred eeEEEECC-CCCCCCCCcEEEEEeCCeeeecCh-hhhHHHHHHHHHHcCCEEEecCCCCCCCCCCCchHHHHHHHHHHHH
Confidence 44444442 1133456899999999662 33 3343333 333333 9999999996554433322222222333333
Q ss_pred HHHHHhC--CccEEEEEeccchHHHHHHHHhCCc----ccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHH
Q 024042 113 KLLEKIG--VERFSVVGTSYGGFVAYHMARMWPE----RVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQ 186 (273)
Q Consensus 113 ~~~~~~~--~~~i~l~G~S~Gg~~a~~~a~~~~~----~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (273)
+-...++ .++|+++|+|.||++++.++....+ ...+.+++.|..+... .......... ........
T Consensus 142 ~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~-~~~~~~~~~~-------~~~~~~~~ 213 (312)
T COG0657 142 ANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS-SAASLPGYGE-------ADLLDAAA 213 (312)
T ss_pred hhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc-cccchhhcCC-------ccccCHHH
Confidence 3333333 5889999999999999999876543 4788999999877664 1100000000 00001111
Q ss_pred HHHHhhhhhccC----C--CCChh--hHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCCCCCcCc
Q 024042 187 LRTLTGLAVSKN----L--DIVPD--FFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENTSHVPQI 255 (273)
Q Consensus 187 ~~~~~~~~~~~~----~--~~~~~--~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~ 255 (273)
........+... . ...|. ..... ..|+++++|+.|.+.+ ..+.+.+++ +..+++..+++..|.+..
T Consensus 214 ~~~~~~~~~~~~~~~~~~p~~spl~~~~~~~-lPP~~i~~a~~D~l~~--~~~~~a~~L~~agv~~~~~~~~g~~H~f~~ 290 (312)
T COG0657 214 ILAWFADLYLGAAPDREDPEASPLASDDLSG-LPPTLIQTAEFDPLRD--EGEAYAERLRAAGVPVELRVYPGMIHGFDL 290 (312)
T ss_pred HHHHHHHHhCcCccccCCCccCccccccccC-CCCEEEEecCCCcchh--HHHHHHHHHHHcCCeEEEEEeCCcceeccc
Confidence 110111111000 0 00110 00223 4499999999999977 444554444 467899999999996533
Q ss_pred CC-hh--hHHHHHHHHhc
Q 024042 256 EN-PG--LFNSIVKNFLR 270 (273)
Q Consensus 256 ~~-~~--~~~~~i~~fl~ 270 (273)
-. +. .....+.+|+.
T Consensus 291 ~~~~~a~~~~~~~~~~l~ 308 (312)
T COG0657 291 LTGPEARSALRQIAAFLR 308 (312)
T ss_pred cCcHHHHHHHHHHHHHHH
Confidence 32 21 22344555554
No 110
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.56 E-value=1.9e-13 Score=102.51 Aligned_cols=215 Identities=17% Similarity=0.249 Sum_probs=126.5
Q ss_pred CCCCeEEEEcCCCCchhHhHHHH-H-HhhcCCCeEEeecCCCCCCCCCCCccc----cHHH----------HHHHHHHHH
Q 024042 52 LKKPSLVLIHGFGPEAIWQWRKQ-V-QFFAPHFNVYVPDLIFFGHSTTRSIQR----TELF----------QAASLGKLL 115 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~~~~~~~~-~-~~l~~~~~v~~~d~~g~g~s~~~~~~~----~~~~----------~~~~~~~~~ 115 (273)
+.+|.+|.++|.|......-+.+ + +.+.+++..+.+..|-||...+..... ...+ .+..+..++
T Consensus 90 ~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl 169 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWL 169 (348)
T ss_pred CCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHH
Confidence 45889999999887662221223 3 444556999999999999876543321 1111 133345555
Q ss_pred HHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcc---------hHHHhhhhhhhhhhhc---c----
Q 024042 116 EKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGD---------NEALVKRANLERIDHL---M---- 179 (273)
Q Consensus 116 ~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~---~---- 179 (273)
+..+..++.+.|.||||.+|..++...|..+..+-.+++........ +..+.+......+... .
T Consensus 170 ~~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q~~~~~~~~~~~~~~~~~ 249 (348)
T PF09752_consen 170 EREGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSINWDALEKQFEDTVYEEEISDIPAQN 249 (348)
T ss_pred HhcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCCHHHHHHHhcccchhhhhcccccCc
Confidence 55688999999999999999999999998776666665543321111 2222222000000000 0
Q ss_pred ----------CCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCC
Q 024042 180 ----------LPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENT 249 (273)
Q Consensus 180 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (273)
.....+.......... . ...........-...+.++.+++|..+|.+.+..+.+.+ +++++..++ +
T Consensus 250 ~~~~~~~~~~~~~~~Ea~~~m~~~md-~-~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~W-PGsEvR~l~-g 325 (348)
T PF09752_consen 250 KSLPLDSMEERRRDREALRFMRGVMD-S-FTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQEIW-PGSEVRYLP-G 325 (348)
T ss_pred ccccchhhccccchHHHHHHHHHHHH-h-hccccccCCCCCCCcEEEEEecCceEechhhcchHHHhC-CCCeEEEec-C
Confidence 0000111111000000 0 000000000011116889999999999999999999999 999999998 5
Q ss_pred CCC-cCcCChhhHHHHHHHHhc
Q 024042 250 SHV-PQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 250 gH~-~~~~~~~~~~~~i~~fl~ 270 (273)
||. .++-+.+.+.+.|.+-++
T Consensus 326 GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 326 GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred CcEEEeeechHHHHHHHHHHhh
Confidence 996 455667888888887664
No 111
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.52 E-value=2.6e-13 Score=113.18 Aligned_cols=112 Identities=13% Similarity=0.075 Sum_probs=83.8
Q ss_pred EEecCCcceEEeecCCccCC---CCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCC------
Q 024042 29 TIDIDDETTLHFWGPKLEDD---HKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTR------ 98 (273)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~~---~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~------ 98 (273)
.+..+++.++.|...+.... .+....|+||++||++++. ..|..+++.|.+. |+|+++|+||||.|...
T Consensus 421 ~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~-~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~ 499 (792)
T TIGR03502 421 LLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAK-ENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGV 499 (792)
T ss_pred EEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCH-HHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccc
Confidence 44455777777766442110 1123457999999999999 8999999999865 99999999999999432
Q ss_pred ----Cc-------------cccHHHHHHHHHHHHHHhC----------------CccEEEEEeccchHHHHHHHHh
Q 024042 99 ----SI-------------QRTELFQAASLGKLLEKIG----------------VERFSVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 99 ----~~-------------~~~~~~~~~~~~~~~~~~~----------------~~~i~l~G~S~Gg~~a~~~a~~ 141 (273)
.. ...+...+.|+..+...+. ..+++++||||||.++..++..
T Consensus 500 ~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 500 NATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred cccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 11 1256777888887777765 2589999999999999999875
No 112
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.51 E-value=7.5e-13 Score=120.73 Aligned_cols=200 Identities=14% Similarity=0.100 Sum_probs=125.0
Q ss_pred CCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCC-ccEEEEEeccc
Q 024042 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGV-ERFSVVGTSYG 131 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~l~G~S~G 131 (273)
..++++++||++++. ..|..+.+.|..++.|+.++.+|++.+. ...+++++.++++.+.++.+.. .+++++|||+|
T Consensus 1067 ~~~~l~~lh~~~g~~-~~~~~l~~~l~~~~~v~~~~~~g~~~~~--~~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~G 1143 (1296)
T PRK10252 1067 DGPTLFCFHPASGFA-WQFSVLSRYLDPQWSIYGIQSPRPDGPM--QTATSLDEVCEAHLATLLEQQPHGPYHLLGYSLG 1143 (1296)
T ss_pred CCCCeEEecCCCCch-HHHHHHHHhcCCCCcEEEEECCCCCCCC--CCCCCHHHHHHHHHHHHHhhCCCCCEEEEEechh
Confidence 357899999999998 8999999999888999999999998653 3457899999999998987754 58999999999
Q ss_pred hHHHHHHHHh---CCcccceEEEecCCCCCCCcc---------hHHHhhhh-hhhhhhhccCCC-ChHHHHHHhhhhhcc
Q 024042 132 GFVAYHMARM---WPERVEKVVIASSGVNMKRGD---------NEALVKRA-NLERIDHLMLPE-SASQLRTLTGLAVSK 197 (273)
Q Consensus 132 g~~a~~~a~~---~~~~v~~~v~~~~~~~~~~~~---------~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 197 (273)
|.+|..+|.+ .++++..++++++........ ........ ............ .......... .+..
T Consensus 1144 g~vA~e~A~~l~~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 1222 (1296)
T PRK10252 1144 GTLAQGIAARLRARGEEVAFLGLLDTWPPETQNWREKEANGLDPEVLAEIDREREAFLAAQQGSLSTELFTTIEG-NYAD 1222 (1296)
T ss_pred hHHHHHHHHHHHHcCCceeEEEEecCCCcccccccccccccCChhhhhhhhhhHHHHHHhhhccccHHHHHHHHH-HHHH
Confidence 9999999986 467899999988643211000 00000000 000000000000 0000111100 0000
Q ss_pred CCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCCh
Q 024042 198 NLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENP 258 (273)
Q Consensus 198 ~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 258 (273)
............+..|++++.+..|..........|.+.. .+.+...++ ++|+.+...+
T Consensus 1223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~-~~~~~~~v~-g~H~~~~~~~ 1281 (1296)
T PRK10252 1223 AVRLLTTAHSVPFDGKATLFVAERTLQEGMSPEQAWSPWI-AELDVYRQD-CAHVDIISPE 1281 (1296)
T ss_pred HHHHHHhccCCcccCceEEEEcCCCCcccCCcccchhhhc-CCCEEEECC-CCHHHHCCcH
Confidence 0000000111234458999999988765555555666666 678888886 7999877544
No 113
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.50 E-value=1.3e-13 Score=82.29 Aligned_cols=77 Identities=21% Similarity=0.298 Sum_probs=64.0
Q ss_pred cceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCcc-ccHHHHHHHHH
Q 024042 35 ETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQ-RTELFQAASLG 112 (273)
Q Consensus 35 g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~-~~~~~~~~~~~ 112 (273)
|.+|+++.+.| .++.+.+|+++||++.+. ..|..+++.|+++ |.|+++|+||||.|.+.... .+.+++++|+.
T Consensus 1 G~~L~~~~w~p----~~~~k~~v~i~HG~~eh~-~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~ 75 (79)
T PF12146_consen 1 GTKLFYRRWKP----ENPPKAVVVIVHGFGEHS-GRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLH 75 (79)
T ss_pred CcEEEEEEecC----CCCCCEEEEEeCCcHHHH-HHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHH
Confidence 56788888863 223588999999999998 8899999999988 99999999999999865544 47888899988
Q ss_pred HHHH
Q 024042 113 KLLE 116 (273)
Q Consensus 113 ~~~~ 116 (273)
.+++
T Consensus 76 ~~~~ 79 (79)
T PF12146_consen 76 QFIQ 79 (79)
T ss_pred HHhC
Confidence 8763
No 114
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.50 E-value=1.4e-11 Score=92.17 Aligned_cols=104 Identities=16% Similarity=0.210 Sum_probs=84.6
Q ss_pred CCeEEEEcCCCCchhHhHHHHHHhhc----CCCeEEeecCCCCCCCCCC------CccccHHHHHHHHHHHHHHh-----
Q 024042 54 KPSLVLIHGFGPEAIWQWRKQVQFFA----PHFNVYVPDLIFFGHSTTR------SIQRTELFQAASLGKLLEKI----- 118 (273)
Q Consensus 54 ~~~vi~~hG~~~~~~~~~~~~~~~l~----~~~~v~~~d~~g~g~s~~~------~~~~~~~~~~~~~~~~~~~~----- 118 (273)
+..++|++|.+|-. ..|..++..|. .++.|+++.+.||-.+... ...++.+++++-..++++.+
T Consensus 2 ~~li~~IPGNPGlv-~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~ 80 (266)
T PF10230_consen 2 RPLIVFIPGNPGLV-EFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKN 80 (266)
T ss_pred cEEEEEECCCCChH-HHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhc
Confidence 46799999999998 88888876664 4599999999999777654 23468888887777777654
Q ss_pred -CCccEEEEEeccchHHHHHHHHhCC---cccceEEEecCCCCC
Q 024042 119 -GVERFSVVGTSYGGFVAYHMARMWP---ERVEKVVIASSGVNM 158 (273)
Q Consensus 119 -~~~~i~l~G~S~Gg~~a~~~a~~~~---~~v~~~v~~~~~~~~ 158 (273)
...+++++|||.|++++++++.+.+ .+|.+++++-|....
T Consensus 81 ~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 81 KPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIED 124 (266)
T ss_pred CCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcccc
Confidence 2367999999999999999999998 679999999987654
No 115
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.50 E-value=3.2e-12 Score=96.65 Aligned_cols=125 Identities=19% Similarity=0.131 Sum_probs=81.1
Q ss_pred CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchh--HhHHHH-HH-------hhcCCCeEEeecCCCCCCCCCCCcccc
Q 024042 34 DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAI--WQWRKQ-VQ-------FFAPHFNVYVPDLIFFGHSTTRSIQRT 103 (273)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~--~~~~~~-~~-------~l~~~~~v~~~d~~g~g~s~~~~~~~~ 103 (273)
||++|....+.| .....++.|+||..++++.... ...... .. ...++|.|+..|.||.|.|.+.....
T Consensus 1 DGv~L~adv~~P-~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~- 78 (272)
T PF02129_consen 1 DGVRLAADVYRP-GADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM- 78 (272)
T ss_dssp TS-EEEEEEEEE---TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT-
T ss_pred CCCEEEEEEEec-CCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC-
Confidence 688888877764 2245677899999999885430 111111 11 33445999999999999999765442
Q ss_pred HHHHHHHHHHHHHHh---CC--ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCC
Q 024042 104 ELFQAASLGKLLEKI---GV--ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKR 160 (273)
Q Consensus 104 ~~~~~~~~~~~~~~~---~~--~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~ 160 (273)
.....+|..++++.+ .. .+|.++|.|++|..++.+|...|..+++++...+..+...
T Consensus 79 ~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 79 SPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp SHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCC
T ss_pred ChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccc
Confidence 333344544444444 22 6899999999999999999988888999999888776654
No 116
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.49 E-value=4.9e-12 Score=90.75 Aligned_cols=179 Identities=17% Similarity=0.160 Sum_probs=98.7
Q ss_pred EeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHH--HHhhcCC--CeEEeecCCCCCCCC------CC---CccccHH
Q 024042 39 HFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQ--VQFFAPH--FNVYVPDLIFFGHST------TR---SIQRTEL 105 (273)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~--~~~l~~~--~~v~~~d~~g~g~s~------~~---~~~~~~~ 105 (273)
.|..+-|+.. ...+.|.||++||.+.+. ..+... ...+++. |.|+.++........ .. ....+..
T Consensus 2 ~Y~lYvP~~~-~~~~~PLVv~LHG~~~~a-~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~ 79 (220)
T PF10503_consen 2 SYRLYVPPGA-PRGPVPLVVVLHGCGQSA-EDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVA 79 (220)
T ss_pred cEEEecCCCC-CCCCCCEEEEeCCCCCCH-HHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchh
Confidence 4555543321 123578999999999988 555432 2345544 788888754211000 00 0011222
Q ss_pred HHHHHHHHHHHHh--CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCC
Q 024042 106 FQAASLGKLLEKI--GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPES 183 (273)
Q Consensus 106 ~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (273)
...+.+..+..+. +.+||++.|+|.||.++..++..+|+.+.++...++............... .........
T Consensus 80 ~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~~a~~~~~a~~~-----m~~g~~~~p 154 (220)
T PF10503_consen 80 FIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYGCAASGASALSA-----MRSGPRPAP 154 (220)
T ss_pred hHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccccccccCcccHHHH-----hhCCCCCCh
Confidence 2223333344444 447999999999999999999999999999888876543322111110100 000000111
Q ss_pred hHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh
Q 024042 184 ASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL 237 (273)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~ 237 (273)
.......... ...+. .|++++||+.|..|.+...+.+.+++
T Consensus 155 ~~~~~a~~~~------g~~~~-------~P~~v~hG~~D~tV~~~n~~~~~~q~ 195 (220)
T PF10503_consen 155 AAAWGARSDA------GAYPG-------YPRIVFHGTADTTVNPQNADQLVAQW 195 (220)
T ss_pred HHHHHhhhhc------cCCCC-------CCEEEEecCCCCccCcchHHHHHHHH
Confidence 1111100000 00111 28999999999999998888777766
No 117
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.48 E-value=1.9e-12 Score=95.78 Aligned_cols=211 Identities=16% Similarity=0.186 Sum_probs=76.3
Q ss_pred CCCeEEEEcCCCCch--hHhHHHHHHhhcCC-CeEEeecCC----CCCCCCCCCccccHHHHHHHHHHHHHHh-------
Q 024042 53 KKPSLVLIHGFGPEA--IWQWRKQVQFFAPH-FNVYVPDLI----FFGHSTTRSIQRTELFQAASLGKLLEKI------- 118 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~--~~~~~~~~~~l~~~-~~v~~~d~~----g~g~s~~~~~~~~~~~~~~~~~~~~~~~------- 118 (273)
....|||+.|.+... ......+++.|.+. |.++-+.++ |+|.+ +.+..+++|.++++.+
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~-------SL~~D~~eI~~~v~ylr~~~~g~ 104 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTS-------SLDRDVEEIAQLVEYLRSEKGGH 104 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S---------HHHHHHHHHHHHHHHHHHS---
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcc-------hhhhHHHHHHHHHHHHHHhhccc
Confidence 566899999987644 13456788888765 999988766 44433 5555566665555543
Q ss_pred -CCccEEEEEeccchHHHHHHHHhCC-----cccceEEEecCCCCCCCcch--HH---Hhhhhhh-hhh-----hhccCC
Q 024042 119 -GVERFSVVGTSYGGFVAYHMARMWP-----ERVEKVVIASSGVNMKRGDN--EA---LVKRANL-ERI-----DHLMLP 181 (273)
Q Consensus 119 -~~~~i~l~G~S~Gg~~a~~~a~~~~-----~~v~~~v~~~~~~~~~~~~~--~~---~~~~~~~-~~~-----~~~~~~ 181 (273)
+.++|+|+|||-|+.-++.++.... ..|+++|+-+|..+...... .. ....... ... ...+.+
T Consensus 105 ~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~~~i~~g~~~~~lp 184 (303)
T PF08538_consen 105 FGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALAKELIAEGKGDEILP 184 (303)
T ss_dssp ---S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHHHHHHCT-TT-GG-
T ss_pred cCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHHHHHHcCCCCceee
Confidence 3478999999999999999988752 56999999999876543221 00 1111000 000 000000
Q ss_pred ---------CChHHHHHHhhhhhccC---------CCCChhhHHhhhhccEEEEecCCCCCCChH-----HHHHHHHHhc
Q 024042 182 ---------ESASQLRTLTGLAVSKN---------LDIVPDFFFNDFVHDVLIVWGDQDQIFPLK-----MATELKELLG 238 (273)
Q Consensus 182 ---------~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~-----~~~~~~~~~~ 238 (273)
..+-...++........ .+..-...+..+..|+|++.+++|+.+|.. ..++|.+..+
T Consensus 185 ~~~~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~Ll~rw~~a~~ 264 (303)
T PF08538_consen 185 REFTPLVFYDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEALLERWKAATN 264 (303)
T ss_dssp ---GGTTT-SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT--------------------
T ss_pred ccccccccCCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceecccccccccccccccccc
Confidence 11111111111110000 000111123344459999999999999864 2233333331
Q ss_pred C---CcEEEEeCCCCCCcCcCCh----hhHHHHHHHHhc
Q 024042 239 K---KARLEIIENTSHVPQIENP----GLFNSIVKNFLR 270 (273)
Q Consensus 239 ~---~~~~~~~~~~gH~~~~~~~----~~~~~~i~~fl~ 270 (273)
+ ...--++||++|..--+.. +.+.+.+..||+
T Consensus 265 ~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 265 PKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp ---------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccCC
Confidence 1 1224588999998654322 357777888874
No 118
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.47 E-value=9.8e-13 Score=96.53 Aligned_cols=205 Identities=20% Similarity=0.272 Sum_probs=119.6
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHHHhhc-CC---CeEEe--ecCCCC----CC--C--CCC-------Ccc-ccHHHHH
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQVQFFA-PH---FNVYV--PDLIFF----GH--S--TTR-------SIQ-RTELFQA 108 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~~~l~-~~---~~v~~--~d~~g~----g~--s--~~~-------~~~-~~~~~~~ 108 (273)
.....|.||+||++++. ..+..++..+. +. -.++. ++.-|. |. . ..| ... .+....+
T Consensus 8 ~~~~tPTifihG~~gt~-~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa 86 (255)
T PF06028_consen 8 NQSTTPTIFIHGYGGTA-NSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQA 86 (255)
T ss_dssp --S-EEEEEE--TTGGC-CCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHH
T ss_pred ccCCCcEEEECCCCCCh-hHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHH
Confidence 34566899999999998 89999998886 32 33333 333331 21 1 111 011 2566778
Q ss_pred HHHHHHHHHh----CCccEEEEEeccchHHHHHHHHhCCc-----ccceEEEecCCCCCCCcchHHHhhhhhhhhhhhcc
Q 024042 109 ASLGKLLEKI----GVERFSVVGTSYGGFVAYHMARMWPE-----RVEKVVIASSGVNMKRGDNEALVKRANLERIDHLM 179 (273)
Q Consensus 109 ~~~~~~~~~~----~~~~i~l~G~S~Gg~~a~~~a~~~~~-----~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (273)
+++..++..+ +.+++.+|||||||..++.++..+.. ++..+|.+++++........... ...+...-
T Consensus 87 ~wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~----~~~~~~~g 162 (255)
T PF06028_consen 87 KWLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQN----QNDLNKNG 162 (255)
T ss_dssp HHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TT----TT-CSTT-
T ss_pred HHHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccch----hhhhcccC
Confidence 8888877766 66899999999999999999887532 48999999988775432211000 00000000
Q ss_pred CCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecC------CCCCCChHHHHHHHHHhcC---CcEEEEeC--C
Q 024042 180 LPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGD------QDQIFPLKMATELKELLGK---KARLEIIE--N 248 (273)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~------~D~~~~~~~~~~~~~~~~~---~~~~~~~~--~ 248 (273)
.......++.+....... .|... .+|-|.|. .|..||...+..+...+.+ ..+-.++. +
T Consensus 163 p~~~~~~y~~l~~~~~~~----~p~~i------~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~ 232 (255)
T PF06028_consen 163 PKSMTPMYQDLLKNRRKN----FPKNI------QVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKD 232 (255)
T ss_dssp BSS--HHHHHHHHTHGGG----STTT-------EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGG
T ss_pred CcccCHHHHHHHHHHHhh----CCCCe------EEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECCC
Confidence 112223333333321000 11111 68999998 7999999999888887732 23444554 4
Q ss_pred CCCCcCcCChhhHHHHHHHHhcc
Q 024042 249 TSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 249 ~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
+.|.-..+++ ++.+.|.+||=+
T Consensus 233 a~HS~LheN~-~V~~~I~~FLw~ 254 (255)
T PF06028_consen 233 AQHSQLHENP-QVDKLIIQFLWG 254 (255)
T ss_dssp GSCCGGGCCH-HHHHHHHHHHCT
T ss_pred CccccCCCCH-HHHHHHHHHhcC
Confidence 6899877766 677999999843
No 119
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.46 E-value=4.1e-12 Score=98.68 Aligned_cols=131 Identities=19% Similarity=0.238 Sum_probs=95.1
Q ss_pred CCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHH------HHHhhcCC-CeEEeecCCCCCCCC
Q 024042 24 GLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRK------QVQFFAPH-FNVYVPDLIFFGHST 96 (273)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~------~~~~l~~~-~~v~~~d~~g~g~s~ 96 (273)
..+.+.++++||..+.....+ ...+++|+|++.||.-+++ ..|-. ++-.|+++ |+|+.-+.||-..|.
T Consensus 47 ~~E~h~V~T~DgYiL~lhRIp----~~~~~rp~Vll~HGLl~sS-~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr 121 (403)
T KOG2624|consen 47 PVEEHEVTTEDGYILTLHRIP----RGKKKRPVVLLQHGLLASS-SSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSR 121 (403)
T ss_pred ceEEEEEEccCCeEEEEeeec----CCCCCCCcEEEeecccccc-ccceecCccccHHHHHHHcCCceeeecCcCcccch
Confidence 468889999999977776664 2237889999999988877 66643 33456666 999999999966554
Q ss_pred CCC-------c---cccHHH-----HHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCc---ccceEEEecCCCCC
Q 024042 97 TRS-------I---QRTELF-----QAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPE---RVEKVVIASSGVNM 158 (273)
Q Consensus 97 ~~~-------~---~~~~~~-----~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~---~v~~~v~~~~~~~~ 158 (273)
... . ..+..+ ..+.|..+++.-+.+++..+|||.|+.....++...|+ +|+.+++++|....
T Consensus 122 ~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~ 201 (403)
T KOG2624|consen 122 KHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFP 201 (403)
T ss_pred hhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhh
Confidence 211 1 123333 33344445555577899999999999999888887765 69999999998744
Q ss_pred C
Q 024042 159 K 159 (273)
Q Consensus 159 ~ 159 (273)
.
T Consensus 202 k 202 (403)
T KOG2624|consen 202 K 202 (403)
T ss_pred c
Confidence 3
No 120
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.45 E-value=1.1e-11 Score=105.28 Aligned_cols=193 Identities=17% Similarity=0.111 Sum_probs=114.4
Q ss_pred HhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhC--------------------CccEEEEEeccchHH
Q 024042 76 QFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIG--------------------VERFSVVGTSYGGFV 134 (273)
Q Consensus 76 ~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~i~l~G~S~Gg~~ 134 (273)
+.+.++ |.|+.+|.||.|.|.+...... ....+|..++++.+. ..+|.++|.|+||.+
T Consensus 273 ~~~~~rGYaVV~~D~RGtg~SeG~~~~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~ 351 (767)
T PRK05371 273 DYFLPRGFAVVYVSGIGTRGSDGCPTTGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTL 351 (767)
T ss_pred HHHHhCCeEEEEEcCCCCCCCCCcCccCC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHH
Confidence 455555 9999999999999987643322 223444444444442 369999999999999
Q ss_pred HHHHHHhCCcccceEEEecCCCCCCCcchH---------------HHhhhhhhhhhhhccCC----CChHHHHHHhh---
Q 024042 135 AYHMARMWPERVEKVVIASSGVNMKRGDNE---------------ALVKRANLERIDHLMLP----ESASQLRTLTG--- 192 (273)
Q Consensus 135 a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~--- 192 (273)
++.+|...|..++++|..++.......... ....... ....... ...........
T Consensus 352 ~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~---~~r~~~~~~~~~~~~~~~~~~~~~~ 428 (767)
T PRK05371 352 PNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELT---YSRNLLAGDYLRHNEACEKLLAELT 428 (767)
T ss_pred HHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHh---hhcccCcchhhcchHHHHHHHhhhh
Confidence 999999888889999998776543210000 0000000 0000000 00011111000
Q ss_pred -hhhcc---C----CCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCCCCCcCc-CChhh
Q 024042 193 -LAVSK---N----LDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENTSHVPQI-ENPGL 260 (273)
Q Consensus 193 -~~~~~---~----~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~-~~~~~ 260 (273)
..... . ..........++..|+|+++|..|..++.+.+.++++.+ +.+.++.+.+ ++|.... ..+.+
T Consensus 429 ~~~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~-g~H~~~~~~~~~d 507 (767)
T PRK05371 429 AAQDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQ-GGHVYPNNWQSID 507 (767)
T ss_pred hhhhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeC-CCccCCCchhHHH
Confidence 00000 0 011222345567789999999999999988887777776 2356665555 7896433 34567
Q ss_pred HHHHHHHHhcccC
Q 024042 261 FNSIVKNFLRGSL 273 (273)
Q Consensus 261 ~~~~i~~fl~~~l 273 (273)
+.+.+.+|+++.|
T Consensus 508 ~~e~~~~Wfd~~L 520 (767)
T PRK05371 508 FRDTMNAWFTHKL 520 (767)
T ss_pred HHHHHHHHHHhcc
Confidence 7788888887654
No 121
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.44 E-value=2.5e-12 Score=88.15 Aligned_cols=195 Identities=12% Similarity=0.101 Sum_probs=117.8
Q ss_pred CCCCCeEEEEcCCC---CchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCC-CccccHHHHHHHHHHHHHHhC-CccEEE
Q 024042 51 TLKKPSLVLIHGFG---PEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTR-SIQRTELFQAASLGKLLEKIG-VERFSV 125 (273)
Q Consensus 51 ~~~~~~vi~~hG~~---~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~-~~~~~~~~~~~~~~~~~~~~~-~~~i~l 125 (273)
....+..||+||.- ++.......+-..+..+|+|.++++- .+... ....++.+...-+.-+++... .+.+.+
T Consensus 64 ~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~---l~~q~htL~qt~~~~~~gv~filk~~~n~k~l~~ 140 (270)
T KOG4627|consen 64 TNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYN---LCPQVHTLEQTMTQFTHGVNFILKYTENTKVLTF 140 (270)
T ss_pred CCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccC---cCcccccHHHHHHHHHHHHHHHHHhcccceeEEE
Confidence 45678999999943 23323334444566666999998653 33221 112344444555555555553 366778
Q ss_pred EEeccchHHHHHHHHhC-CcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChh
Q 024042 126 VGTSYGGFVAYHMARMW-PERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPD 204 (273)
Q Consensus 126 ~G~S~Gg~~a~~~a~~~-~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (273)
-|||.|+++|+.+..+. ..+|.++++.++.....+.......... ......... ....-
T Consensus 141 gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~te~g~dl----------gLt~~~ae~----------~Scdl 200 (270)
T KOG4627|consen 141 GGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSNTESGNDL----------GLTERNAES----------VSCDL 200 (270)
T ss_pred cccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhCCcccccc----------Ccccchhhh----------cCccH
Confidence 89999999999887663 4579999999886654321110000000 000000000 11222
Q ss_pred hHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCC----hhhHHHHHHHHh
Q 024042 205 FFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIEN----PGLFNSIVKNFL 269 (273)
Q Consensus 205 ~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~----~~~~~~~i~~fl 269 (273)
+.+..+..|+|++.|+.|.---.++.+.+.+.+ ..+++..++|.+|+-..++ ...+...+..|+
T Consensus 201 ~~~~~v~~~ilVv~~~~espklieQnrdf~~q~-~~a~~~~f~n~~hy~I~~~~~~~~s~~~~~~~~~~ 268 (270)
T KOG4627|consen 201 WEYTDVTVWILVVAAEHESPKLIEQNRDFADQL-RKASFTLFKNYDHYDIIEETAIDDSDVSRFLRNIE 268 (270)
T ss_pred HHhcCceeeeeEeeecccCcHHHHhhhhHHHHh-hhcceeecCCcchhhHHHHhccccchHHHHHHHHh
Confidence 344555568999999999776678899999998 7799999999999854432 223444455544
No 122
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.42 E-value=1.1e-11 Score=86.31 Aligned_cols=174 Identities=17% Similarity=0.176 Sum_probs=114.6
Q ss_pred CCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCC-CCCCCCC-CCcc-------ccHHH---HHHHHHHHHHHhC-
Q 024042 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLI-FFGHSTT-RSIQ-------RTELF---QAASLGKLLEKIG- 119 (273)
Q Consensus 54 ~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~-g~g~s~~-~~~~-------~~~~~---~~~~~~~~~~~~~- 119 (273)
+..||.+-.+.+.....-+..+..++.+ |.|++||+- |-..+.. .... .+... ....+.++++..+
T Consensus 39 ~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~ 118 (242)
T KOG3043|consen 39 KKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGD 118 (242)
T ss_pred CeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCC
Confidence 3577777775554425577888888777 999999975 3111111 0000 01111 2233333444334
Q ss_pred CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCC
Q 024042 120 VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNL 199 (273)
Q Consensus 120 ~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (273)
.++|.++|.||||-++..+....+ .+.+++..-|....
T Consensus 119 ~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~d----------------------------------------- 156 (242)
T KOG3043|consen 119 SKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFVD----------------------------------------- 156 (242)
T ss_pred cceeeEEEEeecceEEEEeeccch-hheeeeEecCCcCC-----------------------------------------
Confidence 588999999999999999888877 57777776553221
Q ss_pred CCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCC----cEEEEeCCCCCCcCc-----CCh------hhHHHH
Q 024042 200 DIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKK----ARLEIIENTSHVPQI-----ENP------GLFNSI 264 (273)
Q Consensus 200 ~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~----~~~~~~~~~gH~~~~-----~~~------~~~~~~ 264 (273)
........+|++++.|+.|..+|+.....+.+.++.+ .++.++++-+|.++. +.| ++..+.
T Consensus 157 ----~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~ 232 (242)
T KOG3043|consen 157 ----SADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQR 232 (242)
T ss_pred ----hhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHH
Confidence 1122334459999999999999999999998888322 458999999997653 333 456677
Q ss_pred HHHHhcccC
Q 024042 265 VKNFLRGSL 273 (273)
Q Consensus 265 i~~fl~~~l 273 (273)
+.+|+++.+
T Consensus 233 ~~~Wf~~y~ 241 (242)
T KOG3043|consen 233 FISWFKHYL 241 (242)
T ss_pred HHHHHHHhh
Confidence 778887653
No 123
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.42 E-value=6.8e-12 Score=89.51 Aligned_cols=107 Identities=18% Similarity=0.244 Sum_probs=77.4
Q ss_pred CCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccc---cHHHHHHHHHHHHHHh------
Q 024042 49 HKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQR---TELFQAASLGKLLEKI------ 118 (273)
Q Consensus 49 ~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~---~~~~~~~~~~~~~~~~------ 118 (273)
...+.-|+|+|+||+.-.. ..|..++..++.. |-|+++++-..-. +.... +....++++..-++++
T Consensus 41 ~~~G~yPVilF~HG~~l~n-s~Ys~lL~HIASHGfIVVAPQl~~~~~---p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~ 116 (307)
T PF07224_consen 41 SEAGTYPVILFLHGFNLYN-SFYSQLLAHIASHGFIVVAPQLYTLFP---PDGQDEIKSAASVINWLPEGLQHVLPENVE 116 (307)
T ss_pred CcCCCccEEEEeechhhhh-HHHHHHHHHHhhcCeEEEechhhcccC---CCchHHHHHHHHHHHHHHhhhhhhCCCCcc
Confidence 3456789999999998887 8899999999988 9999999864211 11111 2233344444444443
Q ss_pred -CCccEEEEEeccchHHHHHHHHhCC--cccceEEEecCCCCCC
Q 024042 119 -GVERFSVVGTSYGGFVAYHMARMWP--ERVEKVVIASSGVNMK 159 (273)
Q Consensus 119 -~~~~i~l~G~S~Gg~~a~~~a~~~~--~~v~~~v~~~~~~~~~ 159 (273)
+..++.++|||.||-.|..+|..+. -.+.++|-++|.....
T Consensus 117 ~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~~ 160 (307)
T PF07224_consen 117 ANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGTS 160 (307)
T ss_pred cccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCCC
Confidence 3478999999999999999998763 2488999998876554
No 124
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.42 E-value=6.8e-11 Score=95.13 Aligned_cols=128 Identities=16% Similarity=0.160 Sum_probs=87.6
Q ss_pred eEEecCC---cceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHH------------------hhcCCCeEEe
Q 024042 28 QTIDIDD---ETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQ------------------FFAPHFNVYV 86 (273)
Q Consensus 28 ~~~~~~~---g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~------------------~l~~~~~v~~ 86 (273)
-++.+.+ +..+.||.+.++. ...+.|+||+++|.++++ ..+..+.+ .+.+...++.
T Consensus 50 Gy~~v~~~~~~~~lFyw~~~s~~--~~~~~Pl~lwlnGGPG~s-s~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~ 126 (462)
T PTZ00472 50 GYFDIPGNQTDKHYFYWAFGPRN--GNPEAPVLLWMTGGPGCS-SMFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIY 126 (462)
T ss_pred EEEEeCCCCCCceEEEEEEEcCC--CCCCCCEEEEECCCCcHH-HHHhhhccCCCeEEeCCCCceeECCcccccccCeEE
Confidence 3566633 5678888886442 245679999999998887 54432221 1223478999
Q ss_pred ecCC-CCCCCCCCCcc--ccHHHHHHHHHHHHHHh-------CCccEEEEEeccchHHHHHHHHhC----------Cccc
Q 024042 87 PDLI-FFGHSTTRSIQ--RTELFQAASLGKLLEKI-------GVERFSVVGTSYGGFVAYHMARMW----------PERV 146 (273)
Q Consensus 87 ~d~~-g~g~s~~~~~~--~~~~~~~~~~~~~~~~~-------~~~~i~l~G~S~Gg~~a~~~a~~~----------~~~v 146 (273)
+|.| |+|.|...... .+.++.++++.++++.+ ...+++|+|||+||..+..+|.+. .-.+
T Consensus 127 iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inL 206 (462)
T PTZ00472 127 VDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINL 206 (462)
T ss_pred EeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeee
Confidence 9976 88888654332 35567788887777743 347899999999999887777652 1247
Q ss_pred ceEEEecCCCCC
Q 024042 147 EKVVIASSGVNM 158 (273)
Q Consensus 147 ~~~v~~~~~~~~ 158 (273)
+++++-++..+.
T Consensus 207 kGi~IGNg~~dp 218 (462)
T PTZ00472 207 AGLAVGNGLTDP 218 (462)
T ss_pred EEEEEeccccCh
Confidence 899988887644
No 125
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.41 E-value=1.3e-11 Score=89.45 Aligned_cols=160 Identities=19% Similarity=0.194 Sum_probs=99.9
Q ss_pred CCcceEEeecCCccCCCCCCCC-CeEEEEcCCCCchhHhHHHHHHh-------hcCC-CeEEeecCCC-CCCCCCCCccc
Q 024042 33 DDETTLHFWGPKLEDDHKTLKK-PSLVLIHGFGPEAIWQWRKQVQF-------FAPH-FNVYVPDLIF-FGHSTTRSIQR 102 (273)
Q Consensus 33 ~~g~~l~~~~~~~~~~~~~~~~-~~vi~~hG~~~~~~~~~~~~~~~-------l~~~-~~v~~~d~~g-~g~s~~~~~~~ 102 (273)
+.|.++-|..+-|++-.++++- |.|||+||.|..+......+... ..+. +-|+++.+-- +..++. ....
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~-~t~~ 247 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEE-KTLL 247 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccccccccccc-ccch
Confidence 4678899998887665566666 99999999887663434333321 1112 4455555321 111111 0111
Q ss_pred cHHHHHHHHH-HHHHHhC--CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhcc
Q 024042 103 TELFQAASLG-KLLEKIG--VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLM 179 (273)
Q Consensus 103 ~~~~~~~~~~-~~~~~~~--~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (273)
-.....+.+. .+.++.+ -+||.++|.|+||.-++.++.++|+.+.+.+++++..+...
T Consensus 248 ~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d~v~------------------- 308 (387)
T COG4099 248 YLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGDRVY------------------- 308 (387)
T ss_pred hHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCchhh-------------------
Confidence 1222233333 2233333 37899999999999999999999999999999998554210
Q ss_pred CCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh
Q 024042 180 LPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL 237 (273)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~ 237 (273)
..+.. -..|+.++|+.+|+++|.+.++-+.+.+
T Consensus 309 ------lv~~l-------------------k~~piWvfhs~dDkv~Pv~nSrv~y~~l 341 (387)
T COG4099 309 ------LVRTL-------------------KKAPIWVFHSSDDKVIPVSNSRVLYERL 341 (387)
T ss_pred ------hhhhh-------------------ccCceEEEEecCCCccccCcceeehHHH
Confidence 00000 0118999999999999988776555554
No 126
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.39 E-value=6.7e-12 Score=90.96 Aligned_cols=161 Identities=19% Similarity=0.136 Sum_probs=85.7
Q ss_pred CCCeEEEEcCCCCchhHhHHH----HHHhhcC-CCeEEeecCCCC-----CCCCC----------C-------------C
Q 024042 53 KKPSLVLIHGFGPEAIWQWRK----QVQFFAP-HFNVYVPDLIFF-----GHSTT----------R-------------S 99 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~~~~~----~~~~l~~-~~~v~~~d~~g~-----g~s~~----------~-------------~ 99 (273)
.++.|+++||++.+. ..++. +...|.+ .+..+.+|-|-- |-... . .
T Consensus 3 ~k~riLcLHG~~~na-~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 81 (212)
T PF03959_consen 3 RKPRILCLHGYGQNA-EIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDH 81 (212)
T ss_dssp ---EEEEE--TT--H-HHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SG
T ss_pred CCceEEEeCCCCcCH-HHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcc
Confidence 577899999999999 66654 4456666 577777775521 11100 0 0
Q ss_pred ccccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhC--------CcccceEEEecCCCCCCCcchHHHhhhhh
Q 024042 100 IQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMW--------PERVEKVVIASSGVNMKRGDNEALVKRAN 171 (273)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--------~~~v~~~v~~~~~~~~~~~~~~~~~~~~~ 171 (273)
.....++..+.+.+.++..+. =..|+|+|.||.+|..++... ...++-+|++++.......
T Consensus 82 ~~~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~---------- 150 (212)
T PF03959_consen 82 EYEGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD---------- 150 (212)
T ss_dssp GG---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-----------
T ss_pred cccCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh----------
Confidence 012344555566666666552 357999999999998888542 1247888888876553211
Q ss_pred hhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCC-cEEEEeCCCC
Q 024042 172 LERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKK-ARLEIIENTS 250 (273)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~g 250 (273)
.... . ....+..|+|.|+|++|.+++.+.++.+.+.+ .+ .+++..+ +|
T Consensus 151 -------------------~~~~-------~---~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~-~~~~~v~~h~-gG 199 (212)
T PF03959_consen 151 -------------------YQEL-------Y---DEPKISIPTLHVIGENDPVVPPERSEALAEMF-DPDARVIEHD-GG 199 (212)
T ss_dssp -------------------GTTT-------T-----TT---EEEEEEETT-SSS-HHHHHHHHHHH-HHHEEEEEES-SS
T ss_pred -------------------hhhh-------h---ccccCCCCeEEEEeCCCCCcchHHHHHHHHhc-cCCcEEEEEC-CC
Confidence 0000 0 12233449999999999999999999999999 55 7777776 79
Q ss_pred CCcCcC
Q 024042 251 HVPQIE 256 (273)
Q Consensus 251 H~~~~~ 256 (273)
|.+...
T Consensus 200 H~vP~~ 205 (212)
T PF03959_consen 200 HHVPRK 205 (212)
T ss_dssp SS----
T ss_pred CcCcCC
Confidence 987654
No 127
>PRK04940 hypothetical protein; Provisional
Probab=99.38 E-value=1.2e-10 Score=79.93 Aligned_cols=170 Identities=15% Similarity=0.190 Sum_probs=96.4
Q ss_pred EEEEcCCCCchhHh--HH-HHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHh-C---CccEEEEEec
Q 024042 57 LVLIHGFGPEAIWQ--WR-KQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKI-G---VERFSVVGTS 129 (273)
Q Consensus 57 vi~~hG~~~~~~~~--~~-~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~-~---~~~i~l~G~S 129 (273)
||++||+.++. .. .. .....+..+.+++ +++ ........+.+.+.++.+ . .+++.|+|.|
T Consensus 2 IlYlHGF~SS~-~S~~~Ka~~l~~~~p~~~~~--~l~----------~~~P~~a~~~l~~~i~~~~~~~~~~~~~liGSS 68 (180)
T PRK04940 2 IIYLHGFDSTS-PGNHEKVLQLQFIDPDVRLI--SYS----------TLHPKHDMQHLLKEVDKMLQLSDDERPLICGVG 68 (180)
T ss_pred EEEeCCCCCCC-CccHHHHHhheeeCCCCeEE--ECC----------CCCHHHHHHHHHHHHHHhhhccCCCCcEEEEeC
Confidence 79999999887 44 21 1112221223333 221 112333344444544432 1 1579999999
Q ss_pred cchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhh
Q 024042 130 YGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFND 209 (273)
Q Consensus 130 ~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (273)
+||..|..++.++. + ..|+++|...+... +....+.. .....-...-+.++. .+
T Consensus 69 LGGyyA~~La~~~g--~-~aVLiNPAv~P~~~----L~~~ig~~---~~y~~~~~~h~~eL~----------------~~ 122 (180)
T PRK04940 69 LGGYWAERIGFLCG--I-RQVIFNPNLFPEEN----MEGKIDRP---EEYADIATKCVTNFR----------------EK 122 (180)
T ss_pred hHHHHHHHHHHHHC--C-CEEEECCCCChHHH----HHHHhCCC---cchhhhhHHHHHHhh----------------hc
Confidence 99999999999985 4 46788888776321 11111100 000000011111110 01
Q ss_pred hhccEEEEecCCCCCCChHHHHHHHHHhcCCc-EEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 210 FVHDVLIVWGDQDQIFPLKMATELKELLGKKA-RLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 210 ~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
-....+++..+.|++.+...+.... .++ +..+.+|++|.+ ++-++....|.+|++.
T Consensus 123 ~p~r~~vllq~gDEvLDyr~a~~~y----~~~y~~~v~~GGdH~f--~~fe~~l~~I~~F~~~ 179 (180)
T PRK04940 123 NRDRCLVILSRNDEVLDSQRTAEEL----HPYYEIVWDEEQTHKF--KNISPHLQRIKAFKTL 179 (180)
T ss_pred CcccEEEEEeCCCcccCHHHHHHHh----ccCceEEEECCCCCCC--CCHHHHHHHHHHHHhc
Confidence 1114699999999999887665544 344 788889888974 4456778888898864
No 128
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.38 E-value=2.1e-12 Score=93.36 Aligned_cols=142 Identities=19% Similarity=0.213 Sum_probs=67.9
Q ss_pred HHHHHHHHHh---CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhh------cc
Q 024042 109 ASLGKLLEKI---GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDH------LM 179 (273)
Q Consensus 109 ~~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 179 (273)
+...++++.. +.++|.|+|.|.||.+|+.+|..+| .|+++|.++|....................+.. ..
T Consensus 7 e~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~ 85 (213)
T PF08840_consen 7 EEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDISKFSWN 85 (213)
T ss_dssp HHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--SSEEEETTE--EE----B-GGG-EE-
T ss_pred HHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEecchhcccCCCccCCcCCcChhhceec
Confidence 3344444443 2368999999999999999999998 699999999876544321000000000000000 00
Q ss_pred CCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChH-HHHHHHHHh---c-C-CcEEEEeCCCCCCc
Q 024042 180 LPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLK-MATELKELL---G-K-KARLEIIENTSHVP 253 (273)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~-~~~~~~~~~---~-~-~~~~~~~~~~gH~~ 253 (273)
.+.... ....... .............+++.+|+|+|.|++|..+|.. .++.+.+++ + + +.+.+.|+++||.+
T Consensus 86 ~~~~~~-~~~~~~~-~~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~i 163 (213)
T PF08840_consen 86 EPGLLR-SRYAFEL-ADDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGHLI 163 (213)
T ss_dssp TTS-EE--TT-B---TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S--
T ss_pred CCccee-hhhhhhc-ccccccccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCcee
Confidence 000000 0000000 0000011122346677889999999999999865 444455544 1 2 57888999999974
No 129
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=99.38 E-value=8.6e-12 Score=92.31 Aligned_cols=187 Identities=14% Similarity=0.084 Sum_probs=119.0
Q ss_pred hhCCCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCc
Q 024042 21 ASAGLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSI 100 (273)
Q Consensus 21 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~ 100 (273)
++.+-....+...||-++.--...-.+...+..+..||++-|..+.. + ..-+..-+..+|.|+.++.||++.|.+.+.
T Consensus 210 e~~NG~R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFY-E-vG~m~tP~~lgYsvLGwNhPGFagSTG~P~ 287 (517)
T KOG1553|consen 210 ENKNGQRLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFY-E-VGVMNTPAQLGYSVLGWNHPGFAGSTGLPY 287 (517)
T ss_pred hcCCCeEEEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccce-E-eeeecChHHhCceeeccCCCCccccCCCCC
Confidence 33444566677668876643222111112234466888888866543 1 122233344569999999999999998776
Q ss_pred cccHHHHHHHHH-HHHHHhCC--ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhh
Q 024042 101 QRTELFQAASLG-KLLEKIGV--ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDH 177 (273)
Q Consensus 101 ~~~~~~~~~~~~-~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (273)
.......++.+. -.++.++. +.|++.|||.||..+..+|..+|+ |+++|+-+..-+....
T Consensus 288 p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtFDDllpL---------------- 350 (517)
T KOG1553|consen 288 PVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATFDDLLPL---------------- 350 (517)
T ss_pred cccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecchhhhhhH----------------
Confidence 554444444443 34555654 789999999999999999999997 9999998765443211
Q ss_pred ccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCCh
Q 024042 178 LMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPL 227 (273)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~ 227 (273)
-....+..++................+.+.++..|+.+|.-.+|+++..
T Consensus 351 -Al~rMP~~~~giV~~aiRnh~NLnnaell~ry~GPi~lIRRt~dEIitt 399 (517)
T KOG1553|consen 351 -ALFRMPTFFSGIVEHAIRNHMNLNNAELLARYKGPIRLIRRTQDEIITT 399 (517)
T ss_pred -HhhhchHHHHHHHHHHHHHhcccchHHHHHhhcCchhHhhhhhHhhhhc
Confidence 1122233334444444444444456677778888999988888877654
No 130
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.35 E-value=1.4e-10 Score=84.93 Aligned_cols=100 Identities=19% Similarity=0.201 Sum_probs=85.7
Q ss_pred CeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCC-ccEEEEEeccchH
Q 024042 55 PSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGV-ERFSVVGTSYGGF 133 (273)
Q Consensus 55 ~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~l~G~S~Gg~ 133 (273)
|+|+++|+.++.. ..|..+...+.....|+.++.||++.- .....+++++++...+.|..... .+++|+|||+||.
T Consensus 1 ~pLF~fhp~~G~~-~~~~~L~~~l~~~~~v~~l~a~g~~~~--~~~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG~ 77 (257)
T COG3319 1 PPLFCFHPAGGSV-LAYAPLAAALGPLLPVYGLQAPGYGAG--EQPFASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGGA 77 (257)
T ss_pred CCEEEEcCCCCcH-HHHHHHHHHhccCceeeccccCccccc--ccccCCHHHHHHHHHHHHHHhCCCCCEEEEeeccccH
Confidence 5899999999998 999999999998899999999998863 33446888888888888887755 7999999999999
Q ss_pred HHHHHHHhC---CcccceEEEecCCCC
Q 024042 134 VAYHMARMW---PERVEKVVIASSGVN 157 (273)
Q Consensus 134 ~a~~~a~~~---~~~v~~~v~~~~~~~ 157 (273)
+|..+|.+. .+.|..++++++...
T Consensus 78 vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 78 VAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 999999764 346899999998777
No 131
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.35 E-value=1e-10 Score=81.57 Aligned_cols=174 Identities=16% Similarity=0.170 Sum_probs=106.4
Q ss_pred CCCCeEEEEcCCCCchhHhHHH----HHHhhcCCCeEEeecCCC------CCCCCC-------C----------------
Q 024042 52 LKKPSLVLIHGFGPEAIWQWRK----QVQFFAPHFNVYVPDLIF------FGHSTT-------R---------------- 98 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~~~~~~~----~~~~l~~~~~v~~~d~~g------~g~s~~-------~---------------- 98 (273)
..++.|+|+||+-.+. ..+.. +-..+.+.+..+.+|-|- .-.+.+ +
T Consensus 3 ~~k~rvLcLHGfrQsg-~~F~~Ktg~~rK~l~k~~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~ 81 (230)
T KOG2551|consen 3 QKKLRVLCLHGFRQSG-KVFSEKTGSLRKLLKKLAELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEAS 81 (230)
T ss_pred CCCceEEEecchhhcc-HHHHHHhhhHHHHHHhhheEEecCCCccCCcccCCcccccccccCCcccccchhhhhcccccc
Confidence 3567899999998877 55543 223343346666666551 000000 0
Q ss_pred -CccccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhC--C----c--ccceEEEecCCCCCCCcchHHHhhh
Q 024042 99 -SIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMW--P----E--RVEKVVIASSGVNMKRGDNEALVKR 169 (273)
Q Consensus 99 -~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~--~----~--~v~~~v~~~~~~~~~~~~~~~~~~~ 169 (273)
......+...+.+.+.++..|. =-.|+|+|.|+.++..++..- . . .++-+|++++.......
T Consensus 82 ~~~~~~~eesl~yl~~~i~enGP-FDGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~-------- 152 (230)
T KOG2551|consen 82 FTEYFGFEESLEYLEDYIKENGP-FDGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKK-------- 152 (230)
T ss_pred cccccChHHHHHHHHHHHHHhCC-CccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcch--------
Confidence 0011233345556666666553 127999999999999988721 1 1 25667777664432110
Q ss_pred hhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCC
Q 024042 170 ANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENT 249 (273)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (273)
.........+..|.|.|.|+.|.++|.+.++.|++.+ ++..++.-+ +
T Consensus 153 -------------------------------~~~~~~~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~-~~a~vl~Hp-g 199 (230)
T KOG2551|consen 153 -------------------------------LDESAYKRPLSTPSLHIFGETDTIVPSERSEQLAESF-KDATVLEHP-G 199 (230)
T ss_pred -------------------------------hhhhhhccCCCCCeeEEecccceeecchHHHHHHHhc-CCCeEEecC-C
Confidence 0011122234459999999999999999999999999 777666666 8
Q ss_pred CCCcCcCChhhHHHHHHHHhc
Q 024042 250 SHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 250 gH~~~~~~~~~~~~~i~~fl~ 270 (273)
||+....+ ...+.+.+|++
T Consensus 200 gH~VP~~~--~~~~~i~~fi~ 218 (230)
T KOG2551|consen 200 GHIVPNKA--KYKEKIADFIQ 218 (230)
T ss_pred CccCCCch--HHHHHHHHHHH
Confidence 99976544 44555555554
No 132
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.34 E-value=4.3e-11 Score=87.10 Aligned_cols=107 Identities=21% Similarity=0.211 Sum_probs=71.4
Q ss_pred CCCeEEEEcCCCCchhHhHHHHHHhhc--------C-CCeEEeecCCCCCCCCCCCc-cccHHHHHHHHHHHHHHh----
Q 024042 53 KKPSLVLIHGFGPEAIWQWRKQVQFFA--------P-HFNVYVPDLIFFGHSTTRSI-QRTELFQAASLGKLLEKI---- 118 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~~~~~~~~~l~--------~-~~~v~~~d~~g~g~s~~~~~-~~~~~~~~~~~~~~~~~~---- 118 (273)
.+.+|||+||.+++. ..++.+...+. . .++++++|+......-.... ....+...+.+..+++.+
T Consensus 3 ~g~pVlFIhG~~Gs~-~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~~~~~ 81 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSY-KQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELYKSNR 81 (225)
T ss_pred CCCEEEEECcCCCCH-hHHHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhhhhcc
Confidence 567999999999888 77777765441 1 27899999875432211111 112223334444555544
Q ss_pred -CCccEEEEEeccchHHHHHHHHhCC---cccceEEEecCCCCCCC
Q 024042 119 -GVERFSVVGTSYGGFVAYHMARMWP---ERVEKVVIASSGVNMKR 160 (273)
Q Consensus 119 -~~~~i~l~G~S~Gg~~a~~~a~~~~---~~v~~~v~~~~~~~~~~ 160 (273)
+.++++++||||||.+|..++...+ +.++.+|.++++.....
T Consensus 82 ~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~~ 127 (225)
T PF07819_consen 82 PPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGSP 127 (225)
T ss_pred CCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCcc
Confidence 4588999999999999988876543 46999999988766544
No 133
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.34 E-value=4.3e-10 Score=79.70 Aligned_cols=219 Identities=12% Similarity=0.109 Sum_probs=130.0
Q ss_pred CCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC----CeEEeecCCCCCCCC---C------CCccccHHHHHHHHHHHHH
Q 024042 50 KTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH----FNVYVPDLIFFGHST---T------RSIQRTELFQAASLGKLLE 116 (273)
Q Consensus 50 ~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~----~~v~~~d~~g~g~s~---~------~~~~~~~~~~~~~~~~~~~ 116 (273)
....++.+++++|.+|.. ..|..++..|-+. ..++.+..-||-.-+ . ....++.+++++--.++++
T Consensus 25 ~~~~~~li~~IpGNPG~~-gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik 103 (301)
T KOG3975|consen 25 SGEDKPLIVWIPGNPGLL-GFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIK 103 (301)
T ss_pred CCCCceEEEEecCCCCch-hHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHH
Confidence 356788999999999998 8888887766443 558888777765433 1 1123477778887788887
Q ss_pred HhCC--ccEEEEEeccchHHHHHHHHhCC--cccceEEEecCCCCCCCcch------------HHHhhhhhh------hh
Q 024042 117 KIGV--ERFSVVGTSYGGFVAYHMARMWP--ERVEKVVIASSGVNMKRGDN------------EALVKRANL------ER 174 (273)
Q Consensus 117 ~~~~--~~i~l~G~S~Gg~~a~~~a~~~~--~~v~~~v~~~~~~~~~~~~~------------~~~~~~~~~------~~ 174 (273)
..-. .+++++|||-|+++.+.+..... -.+.+++++-|....-...+ ......... +.
T Consensus 104 ~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt~yi~~~~lp~ 183 (301)
T KOG3975|consen 104 EYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLTSYIYWILLPG 183 (301)
T ss_pred HhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhheeeeeeeecChH
Confidence 7633 78999999999999999887432 24777777766432110000 000000000 00
Q ss_pred -----hhh--ccCCCChHHHH----HHhhhhhccCC-----------CCChhhHHhhhhccEEEEecCCCCCCChHHHHH
Q 024042 175 -----IDH--LMLPESASQLR----TLTGLAVSKNL-----------DIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATE 232 (273)
Q Consensus 175 -----~~~--~~~~~~~~~~~----~~~~~~~~~~~-----------~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~ 232 (273)
+.. ...+..+..+. .+......++. ........++-..-+.+.+|..|..||.+....
T Consensus 184 ~ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~~d~e~~een~d~l~Fyygt~DgW~p~~~~d~ 263 (301)
T KOG3975|consen 184 FIRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTTRDIEYCEENLDSLWFYYGTNDGWVPSHYYDY 263 (301)
T ss_pred HHHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHHhHHHHHHhcCcEEEEEccCCCCCcchHHHHH
Confidence 000 00001111000 00000000000 001222333434478899999999999999999
Q ss_pred HHHHhcCCcEEEE-eCCCCCCcCcCChhhHHHHHHHHhc
Q 024042 233 LKELLGKKARLEI-IENTSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 233 ~~~~~~~~~~~~~-~~~~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
+.+.+ +..++.. .++..|.+...+.+..+..+.+.++
T Consensus 264 ~kdd~-~eed~~Ldedki~HAFV~~~~q~ma~~v~d~~~ 301 (301)
T KOG3975|consen 264 YKDDV-PEEDLKLDEDKIPHAFVVKHAQYMANAVFDMIQ 301 (301)
T ss_pred Hhhhc-chhceeeccccCCcceeecccHHHHHHHHHhhC
Confidence 99999 5444332 2678999988888888888877653
No 134
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.33 E-value=7.1e-12 Score=95.19 Aligned_cols=119 Identities=18% Similarity=0.215 Sum_probs=64.3
Q ss_pred cCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhH------------------HHHHHhhcCC-CeEEeecCCCC
Q 024042 32 IDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQW------------------RKQVQFFAPH-FNVYVPDLIFF 92 (273)
Q Consensus 32 ~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~------------------~~~~~~l~~~-~~v~~~d~~g~ 92 (273)
+.++..+..+..-|+. ..++.|.||++||-++.. +.. ..+...|+++ |.|+++|.+|+
T Consensus 95 ~~p~~~vpaylLvPd~--~~~p~PAVL~lHgHg~~K-e~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~ 171 (390)
T PF12715_consen 95 TTPGSRVPAYLLVPDG--AKGPFPAVLCLHGHGGGK-EKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGF 171 (390)
T ss_dssp -STTB-EEEEEEEETT----S-EEEEEEE--TT--H-HHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTS
T ss_pred ccCCeeEEEEEEecCC--CCCCCCEEEEeCCCCCCc-ccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccc
Confidence 3355555544443221 146678999999977655 221 1235567777 99999999999
Q ss_pred CCCCCCCcc-----ccHHHHHH---------------HHHHHHHHh------CCccEEEEEeccchHHHHHHHHhCCccc
Q 024042 93 GHSTTRSIQ-----RTELFQAA---------------SLGKLLEKI------GVERFSVVGTSYGGFVAYHMARMWPERV 146 (273)
Q Consensus 93 g~s~~~~~~-----~~~~~~~~---------------~~~~~~~~~------~~~~i~l~G~S~Gg~~a~~~a~~~~~~v 146 (273)
|+....... ++....+. +....++.+ +.++|.++|+||||..++.+++.. ++|
T Consensus 172 GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD-dRI 250 (390)
T PF12715_consen 172 GERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD-DRI 250 (390)
T ss_dssp GGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT-
T ss_pred cccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc-hhh
Confidence 987654321 11111111 112233333 347899999999999999999986 579
Q ss_pred ceEEEecC
Q 024042 147 EKVVIASS 154 (273)
Q Consensus 147 ~~~v~~~~ 154 (273)
++.|..+.
T Consensus 251 ka~v~~~~ 258 (390)
T PF12715_consen 251 KATVANGY 258 (390)
T ss_dssp -EEEEES-
T ss_pred HhHhhhhh
Confidence 88887654
No 135
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.32 E-value=2.6e-11 Score=94.89 Aligned_cols=156 Identities=17% Similarity=0.209 Sum_probs=82.5
Q ss_pred CCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCC-C-C--CC-------------c-----------cc
Q 024042 52 LKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHS-T-T--RS-------------I-----------QR 102 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s-~-~--~~-------------~-----------~~ 102 (273)
++-|+|||-||.+++. ..|..++..|+.+ |.|+++|.|..-.. . . .. . ..
T Consensus 98 ~~~PvvIFSHGlgg~R-~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSR-TSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEE 176 (379)
T ss_dssp S-EEEEEEE--TT--T-TTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGG
T ss_pred CCCCEEEEeCCCCcch-hhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchh
Confidence 5689999999999999 9999999999888 99999999942111 0 0 00 0 00
Q ss_pred -------cHHHHHHHHHHHHHHh--------------------------CCccEEEEEeccchHHHHHHHHhCCcccceE
Q 024042 103 -------TELFQAASLGKLLEKI--------------------------GVERFSVVGTSYGGFVAYHMARMWPERVEKV 149 (273)
Q Consensus 103 -------~~~~~~~~~~~~~~~~--------------------------~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~ 149 (273)
.++..++++..+++.+ +.+++.++|||+||..++.++.+. .++++.
T Consensus 177 ~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~ 255 (379)
T PF03403_consen 177 EFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAG 255 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceE
Confidence 1111223333333222 235799999999999999988876 679999
Q ss_pred EEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHH
Q 024042 150 VIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKM 229 (273)
Q Consensus 150 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~ 229 (273)
|+++++...... .....+..|+|+|+++. +.....
T Consensus 256 I~LD~W~~Pl~~-------------------------------------------~~~~~i~~P~L~InSe~--f~~~~~ 290 (379)
T PF03403_consen 256 ILLDPWMFPLGD-------------------------------------------EIYSKIPQPLLFINSES--FQWWEN 290 (379)
T ss_dssp EEES---TTS-G-------------------------------------------GGGGG--S-EEEEEETT--T--HHH
T ss_pred EEeCCcccCCCc-------------------------------------------ccccCCCCCEEEEECcc--cCChhh
Confidence 999987542110 00122344999998875 222333
Q ss_pred HHHHHHHh--cCCcEEEEeCCCCCCcC
Q 024042 230 ATELKELL--GKKARLEIIENTSHVPQ 254 (273)
Q Consensus 230 ~~~~~~~~--~~~~~~~~~~~~gH~~~ 254 (273)
...+.+.. ..+..++.+.|+.|..+
T Consensus 291 ~~~~~~~~~~~~~~~~~ti~gt~H~s~ 317 (379)
T PF03403_consen 291 IFRMKKVISNNKESRMLTIKGTAHLSF 317 (379)
T ss_dssp HHHHHTT--TTS-EEEEEETT--GGGG
T ss_pred HHHHHHHhccCCCcEEEEECCCcCCCc
Confidence 33333322 25678889999999654
No 136
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.32 E-value=8.9e-11 Score=89.73 Aligned_cols=107 Identities=11% Similarity=0.180 Sum_probs=75.7
Q ss_pred CCCeEEEEcCCCCchhHhH-----HHHHHhhcCC-CeEEeecCCCCCCCCCCC--ccccHHHHHHHHHHHHHHhCCccEE
Q 024042 53 KKPSLVLIHGFGPEAIWQW-----RKQVQFFAPH-FNVYVPDLIFFGHSTTRS--IQRTELFQAASLGKLLEKIGVERFS 124 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~~~-----~~~~~~l~~~-~~v~~~d~~g~g~s~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~ 124 (273)
-+++++++|.+-... ..+ ..++..|.++ +.|+.+++++=..+.... .+|-.+...+.+..+.+..+.++|.
T Consensus 106 ~~~PlLiVpP~iNk~-yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid~v~~itg~~~In 184 (445)
T COG3243 106 LKRPLLIVPPWINKF-YILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAAKNLEDYILEGLSEAIDTVKDITGQKDIN 184 (445)
T ss_pred CCCceEeeccccCce-eEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhhccHHHHHHHHHHHHHHHHHHHhCccccc
Confidence 467899999875444 333 3455555555 999999998654443321 1222234445566666666889999
Q ss_pred EEEeccchHHHHHHHHhCCcc-cceEEEecCCCCCCC
Q 024042 125 VVGTSYGGFVAYHMARMWPER-VEKVVIASSGVNMKR 160 (273)
Q Consensus 125 l~G~S~Gg~~a~~~a~~~~~~-v~~~v~~~~~~~~~~ 160 (273)
++|+|.||.++..+++.++.+ |+.++++.+..++..
T Consensus 185 liGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~ 221 (445)
T COG3243 185 LIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSH 221 (445)
T ss_pred eeeEecchHHHHHHHHhhhhcccccceeeecchhhcc
Confidence 999999999999999888877 999999988777654
No 137
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.31 E-value=1e-10 Score=81.06 Aligned_cols=174 Identities=14% Similarity=0.247 Sum_probs=111.4
Q ss_pred CCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCC------------------CCCccccHHHHHHHHHHH
Q 024042 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHST------------------TRSIQRTELFQAASLGKL 114 (273)
Q Consensus 54 ~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~------------------~~~~~~~~~~~~~~~~~~ 114 (273)
..+||++||.+.+. ..|..++..+.-. ..-+++.-|-.-.+. ...........++.+..+
T Consensus 3 ~atIi~LHglGDsg-~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~L 81 (206)
T KOG2112|consen 3 TATIIFLHGLGDSG-SGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANL 81 (206)
T ss_pred eEEEEEEecCCCCC-ccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHH
Confidence 35899999999998 8888887776554 566666443211110 001112344445556666
Q ss_pred HHHh-----CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHH
Q 024042 115 LEKI-----GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRT 189 (273)
Q Consensus 115 ~~~~-----~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (273)
+++. ..++|.+-|.|+||.+|+..+..++..+.+++...+........ +.......
T Consensus 82 i~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~------------~~~~~~~~------- 142 (206)
T KOG2112|consen 82 IDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIG------------LPGWLPGV------- 142 (206)
T ss_pred HHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchhh------------ccCCcccc-------
Confidence 6554 23689999999999999999999987788877766644421110 00000000
Q ss_pred HhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCCCCCcCcCChhhHHHHHH
Q 024042 190 LTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENTSHVPQIENPGLFNSIVK 266 (273)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~~~~~~~~~~i~ 266 (273)
. ..|++..||+.|++||....+...+.+ +..++++.+++-+|... ++++ +.+.
T Consensus 143 ------------~--------~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~---~~e~-~~~~ 198 (206)
T KOG2112|consen 143 ------------N--------YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHSTS---PQEL-DDLK 198 (206)
T ss_pred ------------C--------cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCcccccc---HHHH-HHHH
Confidence 0 228999999999999987665555444 35589999999999754 4444 4455
Q ss_pred HHhcc
Q 024042 267 NFLRG 271 (273)
Q Consensus 267 ~fl~~ 271 (273)
.|+++
T Consensus 199 ~~~~~ 203 (206)
T KOG2112|consen 199 SWIKT 203 (206)
T ss_pred HHHHH
Confidence 66653
No 138
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.30 E-value=8.8e-11 Score=80.81 Aligned_cols=178 Identities=16% Similarity=0.118 Sum_probs=111.1
Q ss_pred CeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHH----hCCccEEEEEec
Q 024042 55 PSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEK----IGVERFSVVGTS 129 (273)
Q Consensus 55 ~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~l~G~S 129 (273)
..+||+.|=|+-. ..-..++..|+++ +.|+.+|-+-|-.+. .+.++.+.|+..+++. .+.++++|+|+|
T Consensus 3 t~~v~~SGDgGw~-~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~-----rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYS 76 (192)
T PF06057_consen 3 TLAVFFSGDGGWR-DLDKQIAEALAKQGVPVVGVDSLRYFWSE-----RTPEQTAADLARIIRHYRARWGRKRVVLIGYS 76 (192)
T ss_pred EEEEEEeCCCCch-hhhHHHHHHHHHCCCeEEEechHHHHhhh-----CCHHHHHHHHHHHHHHHHHHhCCceEEEEeec
Confidence 3678888876666 5667788899888 999999977554443 3445556666555554 477899999999
Q ss_pred cchHHHHHHHHhCCc----ccceEEEecCCCCCCCcc-hHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChh
Q 024042 130 YGGFVAYHMARMWPE----RVEKVVIASSGVNMKRGD-NEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPD 204 (273)
Q Consensus 130 ~Gg~~a~~~a~~~~~----~v~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (273)
+|+-+.-....+.|. +|..++++++.....-.. ...+.... .... .....
T Consensus 77 FGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~dFeihv~~wlg~~---------~~~~----------------~~~~~ 131 (192)
T PF06057_consen 77 FGADVLPFIYNRLPAALRARVAQVVLLSPSTTADFEIHVSGWLGMG---------GDDA----------------AYPVI 131 (192)
T ss_pred CCchhHHHHHhhCCHHHHhheeEEEEeccCCcceEEEEhhhhcCCC---------CCcc----------------cCCch
Confidence 999888887777663 689999998865432110 01110000 0000 00111
Q ss_pred hHHhhhhc-cEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 205 FFFNDFVH-DVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 205 ~~~~~~~~-p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
...+++.. |+++|+|++|.-..-. .+. .++.+.+.+| +||.+ -++.+.+++.|.+-+++
T Consensus 132 pei~~l~~~~v~CiyG~~E~d~~cp---~l~---~~~~~~i~lp-GgHHf-d~dy~~La~~Il~~l~~ 191 (192)
T PF06057_consen 132 PEIAKLPPAPVQCIYGEDEDDSLCP---SLR---QPGVEVIALP-GGHHF-DGDYDALAKRILDALKA 191 (192)
T ss_pred HHHHhCCCCeEEEEEcCCCCCCcCc---ccc---CCCcEEEEcC-CCcCC-CCCHHHHHHHHHHHHhc
Confidence 11222222 8999999887542111 111 2688999999 56655 34567788888777664
No 139
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.26 E-value=1.4e-09 Score=79.53 Aligned_cols=129 Identities=22% Similarity=0.210 Sum_probs=86.5
Q ss_pred CCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHH--HhhcCC--CeEEeecC-C------CC
Q 024042 24 GLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQV--QFFAPH--FNVYVPDL-I------FF 92 (273)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~--~~l~~~--~~v~~~d~-~------g~ 92 (273)
..+..++.. +|.+..|+.+.|+. .+.+.|.||.+||.+++. ..++... +.|++. |-|+.+|- + +.
T Consensus 34 ~~~~~s~~~-~g~~r~y~l~vP~g--~~~~apLvv~LHG~~~sg-ag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~ 109 (312)
T COG3509 34 GSSVASFDV-NGLKRSYRLYVPPG--LPSGAPLVVVLHGSGGSG-AGQLHGTGWDALADREGFLVAYPDGYDRAWNANGC 109 (312)
T ss_pred cCCcccccc-CCCccceEEEcCCC--CCCCCCEEEEEecCCCCh-HHhhcccchhhhhcccCcEEECcCccccccCCCcc
Confidence 445667777 78888888876432 234458999999998888 5555443 445444 88998852 2 12
Q ss_pred CCCCCCCc----cccHHHHHHHHHHHHHHhCC--ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCC
Q 024042 93 GHSTTRSI----QRTELFQAASLGKLLEKIGV--ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGV 156 (273)
Q Consensus 93 g~s~~~~~----~~~~~~~~~~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~ 156 (273)
+.+..+.. ..+.....+.+..++.+.++ .+|++.|.|.||.++..++..+|+.+.++.++++..
T Consensus 110 ~~~~~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 110 GNWFGPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred cccCCcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 22222221 12333344444455555555 589999999999999999999999999998888765
No 140
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=99.22 E-value=1.4e-09 Score=79.21 Aligned_cols=197 Identities=12% Similarity=0.046 Sum_probs=111.2
Q ss_pred EEcCCC--CchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHH-hCCccEEEEEeccchHHH
Q 024042 59 LIHGFG--PEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEK-IGVERFSVVGTSYGGFVA 135 (273)
Q Consensus 59 ~~hG~~--~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a 135 (273)
++|..+ ++. ..|..+...+...+.++.++.+|++.+.... .+.+..++.+...+.. ....+++++|||+||.++
T Consensus 2 ~~~~~~~~~~~-~~~~~~~~~l~~~~~v~~~~~~g~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a 78 (212)
T smart00824 2 CFPSTAAPSGP-HEYARLAAALRGRRDVSALPLPGFGPGEPLP--ASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLA 78 (212)
T ss_pred ccCCCCCCCcH-HHHHHHHHhcCCCccEEEecCCCCCCCCCCC--CCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHH
Confidence 445533 455 7899999999888999999999998665332 3555555555444433 345789999999999999
Q ss_pred HHHHHhC---CcccceEEEecCCCCCCCcchHHHhhhhhh--hhhhh---ccCCCChHHHHHHhhhhhccCCCCChhhHH
Q 024042 136 YHMARMW---PERVEKVVIASSGVNMKRGDNEALVKRANL--ERIDH---LMLPESASQLRTLTGLAVSKNLDIVPDFFF 207 (273)
Q Consensus 136 ~~~a~~~---~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (273)
..++.+. +..+.+++++++......... ........ ..... ..........+....... . ...
T Consensus 79 ~~~a~~l~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~ 149 (212)
T smart00824 79 HAVAARLEARGIPPAAVVLLDTYPPGDPAPE-GWLPELLRGVFEREDSFVPMDDARLTAMGAYLRLFG----G----WTP 149 (212)
T ss_pred HHHHHHHHhCCCCCcEEEEEccCCCCCccch-hhHHHHHHHHHhhhcccccccchhhhHHHHHHHHhc----c----CCC
Confidence 8888763 456888988876443222110 00000000 00000 000000000111110000 0 001
Q ss_pred hhhhccEEEEecCCCCCC-ChHHHHHHHHHhcCCcEEEEeCCCCCCcC-cCChhhHHHHHHHH
Q 024042 208 NDFVHDVLIVWGDQDQIF-PLKMATELKELLGKKARLEIIENTSHVPQ-IENPGLFNSIVKNF 268 (273)
Q Consensus 208 ~~~~~p~l~i~g~~D~~~-~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~~i~~f 268 (273)
..+..|+.++.+++|... +......|.+......+.+.++ ++|+.+ .+++..+.+.+..|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~-g~H~~~~~~~~~~~~~~~~~~ 211 (212)
T smart00824 150 GPVAAPTLLVRASEPLAEWPDEDPDGWRAHWPLPHTVVDVP-GDHFTMMEEHAAATARAVHDW 211 (212)
T ss_pred CCCCCCEEEEeccCCCCCCCCCCcccccCCCCCCceeEEcc-CchHHHHHHhHHHHHHHHHhh
Confidence 223448999999988654 2233334444444567888888 789876 44556666666655
No 141
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=99.21 E-value=2.5e-09 Score=82.03 Aligned_cols=107 Identities=19% Similarity=0.198 Sum_probs=72.4
Q ss_pred CCCCeEEEEcCCCCch---hHhH---HHHHHhhcCCCeEEeecCCCCCCC-CCCCccccHHHHHHHHHHHHHHhCCccEE
Q 024042 52 LKKPSLVLIHGFGPEA---IWQW---RKQVQFFAPHFNVYVPDLIFFGHS-TTRSIQRTELFQAASLGKLLEKIGVERFS 124 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~---~~~~---~~~~~~l~~~~~v~~~d~~g~g~s-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 124 (273)
+..|+||++||+|-.- .... ..+...|. ...++++|+.-.... ....-+....+.++....+++..+.++|+
T Consensus 120 k~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~G~~nI~ 198 (374)
T PF10340_consen 120 KSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESEGNKNII 198 (374)
T ss_pred CCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-CCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhccCCCeEE
Confidence 3569999999976322 0222 22334444 568999998754300 11122346666677777777677889999
Q ss_pred EEEeccchHHHHHHHHhCC-----cccceEEEecCCCCCC
Q 024042 125 VVGTSYGGFVAYHMARMWP-----ERVEKVVIASSGVNMK 159 (273)
Q Consensus 125 l~G~S~Gg~~a~~~a~~~~-----~~v~~~v~~~~~~~~~ 159 (273)
|+|-|.||.+++.+.+... ...+++|+++|+....
T Consensus 199 LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 199 LMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred EEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 9999999999988876421 1368999999998876
No 142
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=99.17 E-value=5.2e-09 Score=84.43 Aligned_cols=127 Identities=15% Similarity=0.208 Sum_probs=84.1
Q ss_pred EEecC--CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHH-------------------hhcCCCeEEee
Q 024042 29 TIDID--DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQ-------------------FFAPHFNVYVP 87 (273)
Q Consensus 29 ~~~~~--~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~-------------------~l~~~~~v~~~ 87 (273)
++.+. .+..+.||.+.++. ...+.|+||++.|.++++ ..+..+.+ .+.+..+++.+
T Consensus 15 yl~~~~~~~~~lfyw~~~s~~--~~~~~Pl~~wlnGGPG~S-S~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~i 91 (415)
T PF00450_consen 15 YLPVNDNENAHLFYWFFESRN--DPEDDPLILWLNGGPGCS-SMWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFI 91 (415)
T ss_dssp EEEECTTTTEEEEEEEEE-SS--GGCSS-EEEEEE-TTTB--THHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE
T ss_pred EEecCCCCCcEEEEEEEEeCC--CCCCccEEEEecCCceec-cccccccccCceEEeecccccccccccccccccceEEE
Confidence 55554 67789999886443 346779999999998888 66544322 12233689999
Q ss_pred cCC-CCCCCCCCCccc---cHHHHHHHHHHHHHHh-------CCccEEEEEeccchHHHHHHHHh----C------Cccc
Q 024042 88 DLI-FFGHSTTRSIQR---TELFQAASLGKLLEKI-------GVERFSVVGTSYGGFVAYHMARM----W------PERV 146 (273)
Q Consensus 88 d~~-g~g~s~~~~~~~---~~~~~~~~~~~~~~~~-------~~~~i~l~G~S~Gg~~a~~~a~~----~------~~~v 146 (273)
|.| |.|.|....... +.++.++++..+++.+ ...+++|.|.|+||..+-.+|.. . +-.+
T Consensus 92 D~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inL 171 (415)
T PF00450_consen 92 DQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINL 171 (415)
T ss_dssp --STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEE
T ss_pred eecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccccccccc
Confidence 966 899987665543 6777788887777764 33689999999999876666543 2 2348
Q ss_pred ceEEEecCCCCC
Q 024042 147 EKVVIASSGVNM 158 (273)
Q Consensus 147 ~~~v~~~~~~~~ 158 (273)
+++++.++..+.
T Consensus 172 kGi~IGng~~dp 183 (415)
T PF00450_consen 172 KGIAIGNGWIDP 183 (415)
T ss_dssp EEEEEESE-SBH
T ss_pred ccceecCccccc
Confidence 899999987765
No 143
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.14 E-value=8.4e-09 Score=78.28 Aligned_cols=42 Identities=21% Similarity=0.258 Sum_probs=36.9
Q ss_pred cEEEEecCCCCCCChHHHHHHHHHh---c-CCcEEEEeCCCCCCcC
Q 024042 213 DVLIVWGDQDQIFPLKMATELKELL---G-KKARLEIIENTSHVPQ 254 (273)
Q Consensus 213 p~l~i~g~~D~~~~~~~~~~~~~~~---~-~~~~~~~~~~~gH~~~ 254 (273)
|+++.+|..|.++|....+.+.+.+ + .+++++.++..+|...
T Consensus 221 Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~ 266 (290)
T PF03583_consen 221 PVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGA 266 (290)
T ss_pred CEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhh
Confidence 9999999999999999988888876 5 5788999999999753
No 144
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=99.14 E-value=1.2e-09 Score=80.19 Aligned_cols=163 Identities=17% Similarity=0.169 Sum_probs=103.3
Q ss_pred CCCCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCC---------CCc-------------c----
Q 024042 49 HKTLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTT---------RSI-------------Q---- 101 (273)
Q Consensus 49 ~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~---------~~~-------------~---- 101 (273)
+.+++-|+|||-||.+++. ..|..+.-.|+.. |.|.+++.|.+-.+.. +.. .
T Consensus 113 tk~~k~PvvvFSHGLggsR-t~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~ 191 (399)
T KOG3847|consen 113 TKNDKYPVVVFSHGLGGSR-TLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFH 191 (399)
T ss_pred CCCCCccEEEEecccccch-hhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEE
Confidence 3467789999999999999 9999999889888 9999999986543220 000 0
Q ss_pred ---ccHHHHHHHHH---HHHHHh------------------------CCccEEEEEeccchHHHHHHHHhCCcccceEEE
Q 024042 102 ---RTELFQAASLG---KLLEKI------------------------GVERFSVVGTSYGGFVAYHMARMWPERVEKVVI 151 (273)
Q Consensus 102 ---~~~~~~~~~~~---~~~~~~------------------------~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~ 151 (273)
......++.+. .+++.+ +..++.++|||+||..+......+. +++..|+
T Consensus 192 irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t-~FrcaI~ 270 (399)
T KOG3847|consen 192 IRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHT-DFRCAIA 270 (399)
T ss_pred eeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcccc-ceeeeee
Confidence 01111222222 222222 1246889999999999988887765 4888888
Q ss_pred ecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHH
Q 024042 152 ASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMAT 231 (273)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~ 231 (273)
.+++..+. ......+...|+++|..+ | +--.+...
T Consensus 271 lD~WM~Pl-------------------------------------------~~~~~~~arqP~~finv~-~-fQ~~en~~ 305 (399)
T KOG3847|consen 271 LDAWMFPL-------------------------------------------DQLQYSQARQPTLFINVE-D-FQWNENLL 305 (399)
T ss_pred eeeeeccc-------------------------------------------chhhhhhccCCeEEEEcc-c-ccchhHHH
Confidence 87765432 122233444499999844 2 22345555
Q ss_pred HHHHHhc--CCcEEEEeCCCCCCcCcCCh
Q 024042 232 ELKELLG--KKARLEIIENTSHVPQIENP 258 (273)
Q Consensus 232 ~~~~~~~--~~~~~~~~~~~gH~~~~~~~ 258 (273)
.+.+... ....++++.|+=|-.+.+-|
T Consensus 306 vmKki~~~n~g~~~it~~GsVHqnfsDfp 334 (399)
T KOG3847|consen 306 VMKKIESQNEGNHVITLDGSVHQNFSDFP 334 (399)
T ss_pred HHHhhhCCCccceEEEEccceecccccCc
Confidence 5655553 34567778888886554433
No 145
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=99.13 E-value=1.4e-10 Score=88.96 Aligned_cols=109 Identities=17% Similarity=0.274 Sum_probs=65.1
Q ss_pred CCCCCeEEEEcCCCCch-hHhHH-HHHH-hhcC--C-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHh------
Q 024042 51 TLKKPSLVLIHGFGPEA-IWQWR-KQVQ-FFAP--H-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKI------ 118 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~-~~~~~-~~~~-~l~~--~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~------ 118 (273)
+.++|++|++|||.++. ...|. .+.. .+.. + +.|+++|+...-...............+.+..+++.+
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~g~ 147 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNFGV 147 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhcCC
Confidence 45789999999998776 34443 3333 4555 4 9999999963221110000012222333333333332
Q ss_pred CCccEEEEEeccchHHHHHHHHhCCc--ccceEEEecCCCCCC
Q 024042 119 GVERFSVVGTSYGGFVAYHMARMWPE--RVEKVVIASSGVNMK 159 (273)
Q Consensus 119 ~~~~i~l~G~S~Gg~~a~~~a~~~~~--~v~~~v~~~~~~~~~ 159 (273)
..++++|||||+||++|-.++..... ++..+..++|+.+..
T Consensus 148 ~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~F 190 (331)
T PF00151_consen 148 PPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPLF 190 (331)
T ss_dssp -GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TTT
T ss_pred ChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccccc
Confidence 44899999999999999999998877 899999999977653
No 146
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=99.11 E-value=2.4e-09 Score=85.38 Aligned_cols=237 Identities=16% Similarity=0.082 Sum_probs=139.8
Q ss_pred CceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch-hHhHHHH-HHhhcCCCeEEeecCCCCCCCCCCCcc-
Q 024042 25 LSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA-IWQWRKQ-VQFFAPHFNVYVPDLIFFGHSTTRSIQ- 101 (273)
Q Consensus 25 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~-~~~~~~~-~~~l~~~~~v~~~d~~g~g~s~~~~~~- 101 (273)
.++...+..||.+|.|.... +..+.+ +.|++|+--|...-+ ...|... ...|.++...+..+.||=|+=.+.-..
T Consensus 394 veQ~~atSkDGT~IPYFiv~-K~~~~d-~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~A 471 (648)
T COG1505 394 VEQFFATSKDGTRIPYFIVR-KGAKKD-ENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQA 471 (648)
T ss_pred EEEEEEEcCCCccccEEEEe-cCCcCC-CCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHH
Confidence 35556666799999999885 332334 788888877743222 1223332 456666788888899986653321110
Q ss_pred ---ccHHHHHHHHHHHHHHh---C---CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhh
Q 024042 102 ---RTELFQAASLGKLLEKI---G---VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANL 172 (273)
Q Consensus 102 ---~~~~~~~~~~~~~~~~~---~---~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~ 172 (273)
..-....+|..++.+.+ + .+++.+.|-|-||.+...+..++|+.+.++|+--|..++..... -..+.
T Consensus 472 a~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlRYh~----l~aG~ 547 (648)
T COG1505 472 GMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLRYHL----LTAGS 547 (648)
T ss_pred HhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhhhcc----cccch
Confidence 11122234444444443 3 36799999999999999999999999999998877666542210 01112
Q ss_pred hhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCC
Q 024042 173 ERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENT 249 (273)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 249 (273)
......-.|..+.....+....-+.+... .+...|+||-.+.+|..|.+.++++++.++ +..+-+.+=.++
T Consensus 548 sW~~EYG~Pd~P~d~~~l~~YSPy~nl~~------g~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~~~pv~~~e~t~g 621 (648)
T COG1505 548 SWIAEYGNPDDPEDRAFLLAYSPYHNLKP------GQKYPPTLITTSLHDDRVHPAHARKFAAKLQEVGAPVLLREETKG 621 (648)
T ss_pred hhHhhcCCCCCHHHHHHHHhcCchhcCCc------cccCCCeEEEcccccccccchHHHHHHHHHHhcCCceEEEeecCC
Confidence 23333345555655554333222221110 011228999999999999999999998888 223333344568
Q ss_pred CCCcCcCChh--hHHHHHHHHhcccC
Q 024042 250 SHVPQIENPG--LFNSIVKNFLRGSL 273 (273)
Q Consensus 250 gH~~~~~~~~--~~~~~i~~fl~~~l 273 (273)
||..--...+ .-...+..||.+.|
T Consensus 622 GH~g~~~~~~~A~~~a~~~afl~r~L 647 (648)
T COG1505 622 GHGGAAPTAEIARELADLLAFLLRTL 647 (648)
T ss_pred cccCCCChHHHHHHHHHHHHHHHHhh
Confidence 9986543332 22333456666543
No 147
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=99.09 E-value=2e-08 Score=71.64 Aligned_cols=200 Identities=21% Similarity=0.241 Sum_probs=114.4
Q ss_pred CCeEEEEcCCCCchhHhHHHHHHhhcCCC------eEEeecCCCC----CCCC----CC-------CccccHHHHHHHHH
Q 024042 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPHF------NVYVPDLIFF----GHST----TR-------SIQRTELFQAASLG 112 (273)
Q Consensus 54 ~~~vi~~hG~~~~~~~~~~~~~~~l~~~~------~v~~~d~~g~----g~s~----~~-------~~~~~~~~~~~~~~ 112 (273)
.-+.||+||++++. .....++.+|.+.+ -++.+|--|. |.=+ .| ....+..++..++.
T Consensus 45 ~iPTIfIhGsgG~a-sS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk 123 (288)
T COG4814 45 AIPTIFIHGSGGTA-SSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLK 123 (288)
T ss_pred ccceEEEecCCCCh-hHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHH
Confidence 45789999999999 88888888776654 3556665551 1100 01 01134555667776
Q ss_pred HHHHHh----CCccEEEEEeccchHHHHHHHHhCCc-----ccceEEEecCCCCCCC-cchHHHhhhhhhhhhhhccCCC
Q 024042 113 KLLEKI----GVERFSVVGTSYGGFVAYHMARMWPE-----RVEKVVIASSGVNMKR-GDNEALVKRANLERIDHLMLPE 182 (273)
Q Consensus 113 ~~~~~~----~~~~i~l~G~S~Gg~~a~~~a~~~~~-----~v~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 182 (273)
.++..+ +..++.++||||||.-...++..+.. .++.+|.+++++.... .......... ..-.+.
T Consensus 124 ~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN~~~l~~de~v~~v~------~~~~~~ 197 (288)
T COG4814 124 KAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFNVGNLVPDETVTDVL------KDGPGL 197 (288)
T ss_pred HHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccccccccCCCcchheee------ccCccc
Confidence 666554 67899999999999999999887632 3899999988776111 1011110000 000000
Q ss_pred ChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCC------CCCChHHHHHHHHHhcCC-cEEE--Ee--CCCCC
Q 024042 183 SASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQD------QIFPLKMATELKELLGKK-ARLE--II--ENTSH 251 (273)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D------~~~~~~~~~~~~~~~~~~-~~~~--~~--~~~gH 251 (273)
.......++...+... .+. ..+|.|.|+-| ..||...+...+..+..+ ..++ ++ +++.|
T Consensus 198 ~~t~y~~y~~~n~k~v---~~~-------~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~ksy~e~~~~Gk~a~H 267 (288)
T COG4814 198 IKTPYYDYIAKNYKKV---SPN-------TEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGKSYIESLYKGKDARH 267 (288)
T ss_pred cCcHHHHHHHhcceeC---CCC-------cEEEEEecccccCCcCCCceechHhHHHHHHhccCcceeEEEeeeCCcchh
Confidence 1111111111111100 111 15899999865 455666666666666333 2222 23 45789
Q ss_pred CcCcCChhhHHHHHHHHhcc
Q 024042 252 VPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 252 ~~~~~~~~~~~~~i~~fl~~ 271 (273)
.-+.|+| .+.+.+..||-+
T Consensus 268 s~lhen~-~v~~yv~~FLw~ 286 (288)
T COG4814 268 SKLHENP-TVAKYVKNFLWE 286 (288)
T ss_pred hccCCCh-hHHHHHHHHhhc
Confidence 8888877 466778888854
No 148
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=99.06 E-value=5.3e-08 Score=77.44 Aligned_cols=172 Identities=17% Similarity=0.157 Sum_probs=92.6
Q ss_pred CCCCCeEEEEcCCCCchh-HhHHHHHHhhcCC----CeEEeecCCCCC-CCC-CCCccccHHHHHHHHHHHHHHh-----
Q 024042 51 TLKKPSLVLIHGFGPEAI-WQWRKQVQFFAPH----FNVYVPDLIFFG-HST-TRSIQRTELFQAASLGKLLEKI----- 118 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~-~~~~~~~~~l~~~----~~v~~~d~~g~g-~s~-~~~~~~~~~~~~~~~~~~~~~~----- 118 (273)
..+.|+|+++||...... .....+-..+.++ ..++.+|..+.. .+. ......-.....+++.-.+++.
T Consensus 206 ~~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l~~eLlP~I~~~y~~~~ 285 (411)
T PRK10439 206 PEERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAVQQELLPQVRAIAPFSD 285 (411)
T ss_pred CCCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHHHHHHHHHHHHhCCCCC
Confidence 346789999999432110 1222222223333 345677653211 111 0111112233445555555543
Q ss_pred CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccC
Q 024042 119 GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKN 198 (273)
Q Consensus 119 ~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (273)
+.++.+|+|+||||..|+.++.++|+.+.+++.+++..-..... ......+....... .
T Consensus 286 d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ww~~~~------------------~~~~~~l~~~l~~~---~ 344 (411)
T PRK10439 286 DADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSFWWPHRG------------------GQQEGVLLEQLKAG---E 344 (411)
T ss_pred CccceEEEEEChHHHHHHHHHHhCcccccEEEEeccceecCCcc------------------CCchhHHHHHHHhc---c
Confidence 33678999999999999999999999999999999864322100 00000011111100 0
Q ss_pred CCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCCCCCc
Q 024042 199 LDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENTSHVP 253 (273)
Q Consensus 199 ~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~ 253 (273)
. .. ....+.+-.|+.|... .+..+.+.+.+ +.+.++.+++ +||..
T Consensus 345 ~--~~------~~lr~~i~~G~~E~~~-~~~~~~l~~~L~~~G~~~~~~~~~-GGHd~ 392 (411)
T PRK10439 345 V--SA------RGLRIVLEAGRREPMI-MRANQALYAQLHPAGHSVFWRQVD-GGHDA 392 (411)
T ss_pred c--CC------CCceEEEeCCCCCchH-HHHHHHHHHHHHHCCCcEEEEECC-CCcCH
Confidence 0 00 0014677788888544 34556666665 4568888998 48963
No 149
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=99.05 E-value=4.9e-08 Score=73.17 Aligned_cols=109 Identities=17% Similarity=0.079 Sum_probs=71.6
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhH------HHHHHhhcC--CCeEEeecCCCCCCCCC
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQW------RKQVQFFAP--HFNVYVPDLIFFGHSTT 97 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~------~~~~~~l~~--~~~v~~~d~~g~g~s~~ 97 (273)
.+..++. |+..+....... +...+...|+++-|.++.. +.. ......+++ +-+|+++++||.|.|.+
T Consensus 113 kRv~Iq~-D~~~IDt~~I~~---~~a~~~RWiL~s~GNg~~~-E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G 187 (365)
T PF05677_consen 113 KRVPIQY-DGVKIDTMAIHQ---PEAKPQRWILVSNGNGECY-ENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTG 187 (365)
T ss_pred eeEEEee-CCEEEEEEEeeC---CCCCCCcEEEEEcCChHHh-hhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCC
Confidence 3445555 888876554431 1245677999999987665 331 112222322 38999999999999988
Q ss_pred CCccccHHHHHHHHHHHHHHh-------CCccEEEEEeccchHHHHHHHHhC
Q 024042 98 RSIQRTELFQAASLGKLLEKI-------GVERFSVVGTSYGGFVAYHMARMW 142 (273)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~-------~~~~i~l~G~S~Gg~~a~~~a~~~ 142 (273)
.... ++++.+-.+.++.+ +.++|++.|||+||.++..++.++
T Consensus 188 ~~s~---~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 188 PPSR---KDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred CCCH---HHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 7753 44444444444333 237899999999999999877665
No 150
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=99.04 E-value=6.9e-08 Score=76.19 Aligned_cols=105 Identities=17% Similarity=0.195 Sum_probs=71.5
Q ss_pred CCCCCCCeEEEEc-------CCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHh---
Q 024042 49 HKTLKKPSLVLIH-------GFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKI--- 118 (273)
Q Consensus 49 ~~~~~~~~vi~~h-------G~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~--- 118 (273)
..+..++++|.+- |+|+.+ . -..+.-.|..++.|+.+.+. ..+.+..++.+.......+++.+
T Consensus 63 ~~d~~krP~vViDPRAGHGpGIGGFK-~-dSevG~AL~~GHPvYFV~F~-----p~P~pgQTl~DV~~ae~~Fv~~V~~~ 135 (581)
T PF11339_consen 63 PVDPTKRPFVVIDPRAGHGPGIGGFK-P-DSEVGVALRAGHPVYFVGFF-----PEPEPGQTLEDVMRAEAAFVEEVAER 135 (581)
T ss_pred CCCCCCCCeEEeCCCCCCCCCccCCC-c-ccHHHHHHHcCCCeEEEEec-----CCCCCCCcHHHHHHHHHHHHHHHHHh
Confidence 3344455555542 344443 1 23456677777888777664 22344567777776666666654
Q ss_pred --CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCC
Q 024042 119 --GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKR 160 (273)
Q Consensus 119 --~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~ 160 (273)
+..+++|+|-|.||..++.+|+.+|+.+.-+|+.+++.....
T Consensus 136 hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPlsywa 179 (581)
T PF11339_consen 136 HPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPLSYWA 179 (581)
T ss_pred CCCCCCceEEeccHHHHHHHHHHhcCcCccCceeecCCCccccc
Confidence 224899999999999999999999999999998887765543
No 151
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.03 E-value=1.3e-08 Score=81.24 Aligned_cols=159 Identities=20% Similarity=0.263 Sum_probs=107.6
Q ss_pred CCCeEEEEcCCC-----CchhHhHHHHHHhhcCCCeEEeecCCC-CCCCCCCCccccHHHHHHHHHHHHH--------Hh
Q 024042 53 KKPSLVLIHGFG-----PEAIWQWRKQVQFFAPHFNVYVPDLIF-FGHSTTRSIQRTELFQAASLGKLLE--------KI 118 (273)
Q Consensus 53 ~~~~vi~~hG~~-----~~~~~~~~~~~~~l~~~~~v~~~d~~g-~g~s~~~~~~~~~~~~~~~~~~~~~--------~~ 118 (273)
..|.+|++||.+ .+....|........+...+..+|++. .|. ..+...++.+..+.+ ++
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG-------~nI~h~ae~~vSf~r~kvlei~gef 247 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGG-------ANIKHAAEYSVSFDRYKVLEITGEF 247 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCC-------cchHHHHHHHHHHhhhhhhhhhccC
Confidence 467899999976 111233444444444447788888873 221 344444444444443 22
Q ss_pred CCccEEEEEeccchHHHHHHHHhCC-cccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhcc
Q 024042 119 GVERFSVVGTSYGGFVAYHMARMWP-ERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSK 197 (273)
Q Consensus 119 ~~~~i~l~G~S~Gg~~a~~~a~~~~-~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (273)
...+|+|+|+|||+.++.+...... ..|+++|.++-+.......
T Consensus 248 pha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgp----------------------------------- 292 (784)
T KOG3253|consen 248 PHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGP----------------------------------- 292 (784)
T ss_pred CCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCcc-----------------------------------
Confidence 4478999999999888877776543 2488888887655433211
Q ss_pred CCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCc
Q 024042 198 NLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQI 255 (273)
Q Consensus 198 ~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 255 (273)
....++.+-++..|+|++.|..|..+++...+++.++.....+++++.+++|.+-.
T Consensus 293 --rgirDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsmai 348 (784)
T KOG3253|consen 293 --RGIRDEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAI 348 (784)
T ss_pred --cCCcchhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccccC
Confidence 01334445566669999999999999999999999998677899999999997643
No 152
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.01 E-value=6.8e-10 Score=84.02 Aligned_cols=204 Identities=18% Similarity=0.164 Sum_probs=105.9
Q ss_pred CCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCC--CCCCCCCcc---c---cHHHHHHHHHHHHH------
Q 024042 52 LKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFF--GHSTTRSIQ---R---TELFQAASLGKLLE------ 116 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~--g~s~~~~~~---~---~~~~~~~~~~~~~~------ 116 (273)
...|.|++-||.|+.. ..+..+++.+++. |.|..++.+|. |........ + ...+...++..+++
T Consensus 69 ~~~PlvvlshG~Gs~~-~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~ 147 (365)
T COG4188 69 YLLPLVVLSHGSGSYV-TGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLT 147 (365)
T ss_pred CcCCeEEecCCCCCCc-cchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhh
Confidence 3679999999999998 9999999999888 99999999983 332211111 1 11122223222222
Q ss_pred -------HhCCccEEEEEeccchHHHHHHHHhCCcccceEE------EecCCCCCCCcchHHHhhhhhhhhhhhccCCCC
Q 024042 117 -------KIGVERFSVVGTSYGGFVAYHMARMWPERVEKVV------IASSGVNMKRGDNEALVKRANLERIDHLMLPES 183 (273)
Q Consensus 117 -------~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (273)
+++..+|.++|||+||+.++.++....+-..... .++....... .......... .....-....
T Consensus 148 ~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~~~~~~~~--~~~l~q~~av-~~~~~~~~~r 224 (365)
T COG4188 148 ASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRICLDPPGLN--GRLLNQCAAV-WLPRQAYDLR 224 (365)
T ss_pred cCcccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcccCCCCcC--hhhhcccccc-ccchhhhccc
Confidence 2244789999999999999998865433110000 0111111000 0000000000 0000000000
Q ss_pred hHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChH-HHHHHHHHh-cCCcEEEEeCCCCCCcCcCChhh
Q 024042 184 ASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLK-MATELKELL-GKKARLEIIENTSHVPQIENPGL 260 (273)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~-~~~~~~~~~-~~~~~~~~~~~~gH~~~~~~~~~ 260 (273)
...++..+...-... ......-..++..|++++.|..|.+.|.. ........+ +...-+..++++.|+.+.+-.++
T Consensus 225 DpriravvA~~p~~~-~~Fg~tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~ 302 (365)
T COG4188 225 DPRIRAVVAINPALG-MIFGTTGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKE 302 (365)
T ss_pred cccceeeeeccCCcc-cccccccceeeecceeeecccccccCCcccccccccccCCcchhheeecCCCccccccccCcc
Confidence 000000000000000 01112234455559999999999987764 333444445 23346788999999988775554
No 153
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=99.00 E-value=6.7e-10 Score=79.71 Aligned_cols=87 Identities=22% Similarity=0.291 Sum_probs=51.5
Q ss_pred CeEEEEcCCCCchhHhHHHHHHhhcCC-Ce---EEeecCCCCCCCCCCCccc----cHHHHHHHHHHHHHHhCCccEEEE
Q 024042 55 PSLVLIHGFGPEAIWQWRKQVQFFAPH-FN---VYVPDLIFFGHSTTRSIQR----TELFQAASLGKLLEKIGVERFSVV 126 (273)
Q Consensus 55 ~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~---v~~~d~~g~g~s~~~~~~~----~~~~~~~~~~~~~~~~~~~~i~l~ 126 (273)
.||||+||.+++....|..+.+.|.++ |. ++++++-............ ...+..+.+.++++.-+. +|.||
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIV 80 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIV 80 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEE
Confidence 479999999885548899999998877 87 7999984332211111111 122344445555555688 99999
Q ss_pred EeccchHHHHHHHHhC
Q 024042 127 GTSYGGFVAYHMARMW 142 (273)
Q Consensus 127 G~S~Gg~~a~~~a~~~ 142 (273)
||||||.++-.+....
T Consensus 81 gHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 81 GHSMGGTIARYYIKGG 96 (219)
T ss_dssp EETCHHHHHHHHHHHC
T ss_pred EcCCcCHHHHHHHHHc
Confidence 9999999998887643
No 154
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=99.00 E-value=6.8e-09 Score=82.60 Aligned_cols=91 Identities=12% Similarity=0.124 Sum_probs=68.5
Q ss_pred HhHHHHHHhhcCCCeEEeecCCCCCCCCCCCcc--ccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcc-
Q 024042 69 WQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQ--RTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPER- 145 (273)
Q Consensus 69 ~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~- 145 (273)
..|..+++.|.+...+...|++|+|.+.+.... ...+...+.+.++.+..+.++++|+||||||.++..++..+|+.
T Consensus 108 ~~~~~li~~L~~~GY~~~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~~~ 187 (440)
T PLN02733 108 YYFHDMIEQLIKWGYKEGKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSDVF 187 (440)
T ss_pred HHHHHHHHHHHHcCCccCCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCHhH
Confidence 789999999988844558999999998765421 22334444455555555678999999999999999999888753
Q ss_pred ---cceEEEecCCCCCC
Q 024042 146 ---VEKVVIASSGVNMK 159 (273)
Q Consensus 146 ---v~~~v~~~~~~~~~ 159 (273)
|+++|.++++....
T Consensus 188 ~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 188 EKYVNSWIAIAAPFQGA 204 (440)
T ss_pred HhHhccEEEECCCCCCC
Confidence 78899998765543
No 155
>COG3150 Predicted esterase [General function prediction only]
Probab=98.96 E-value=4.4e-08 Score=65.35 Aligned_cols=183 Identities=16% Similarity=0.175 Sum_probs=99.6
Q ss_pred EEEEcCCCCchhHhHHHHH--HhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEeccchHH
Q 024042 57 LVLIHGFGPEAIWQWRKQV--QFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFV 134 (273)
Q Consensus 57 vi~~hG~~~~~~~~~~~~~--~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~ 134 (273)
||++||+.++. ....... +.+.+...-+.+--| ....+....++.+..++...+.+.+.|+|.|+||+.
T Consensus 2 ilYlHGFnSSP-~shka~l~~q~~~~~~~~i~y~~p--------~l~h~p~~a~~ele~~i~~~~~~~p~ivGssLGGY~ 72 (191)
T COG3150 2 ILYLHGFNSSP-GSHKAVLLLQFIDEDVRDIEYSTP--------HLPHDPQQALKELEKAVQELGDESPLIVGSSLGGYY 72 (191)
T ss_pred eEEEecCCCCc-ccHHHHHHHHHHhccccceeeecC--------CCCCCHHHHHHHHHHHHHHcCCCCceEEeecchHHH
Confidence 89999998877 5544332 344433333222221 223467778888999999988778999999999999
Q ss_pred HHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccE
Q 024042 135 AYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDV 214 (273)
Q Consensus 135 a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 214 (273)
|..++.++. +++ |+++|...+.......+-+..+.-.-... ...+..+.......+... ..| ..
T Consensus 73 At~l~~~~G--ira-v~~NPav~P~e~l~gylg~~en~ytg~~y--~le~~hI~~l~~~~~~~l--~~p---------~~ 136 (191)
T COG3150 73 ATWLGFLCG--IRA-VVFNPAVRPYELLTGYLGRPENPYTGQEY--VLESRHIATLCVLQFREL--NRP---------RC 136 (191)
T ss_pred HHHHHHHhC--Chh-hhcCCCcCchhhhhhhcCCCCCCCCcceE--EeehhhHHHHHHhhcccc--CCC---------cE
Confidence 999999874 554 45566655432211111110000000000 000111111111111110 011 34
Q ss_pred EEEecCC-CCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhc
Q 024042 215 LIVWGDQ-DQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLR 270 (273)
Q Consensus 215 l~i~g~~-D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 270 (273)
+++.... |++.....+... + ..+...+++++.|.+ .+-+...+.|..|+.
T Consensus 137 ~~lL~qtgDEvLDyr~a~a~---y-~~~~~~V~dgg~H~F--~~f~~~l~~i~aF~g 187 (191)
T COG3150 137 LVLLSQTGDEVLDYRQAVAY---Y-HPCYEIVWDGGDHKF--KGFSRHLQRIKAFKG 187 (191)
T ss_pred EEeecccccHHHHHHHHHHH---h-hhhhheeecCCCccc--cchHHhHHHHHHHhc
Confidence 5555555 988765544443 3 556677888899974 233445566777754
No 156
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.89 E-value=2e-07 Score=69.32 Aligned_cols=211 Identities=17% Similarity=0.139 Sum_probs=110.6
Q ss_pred eEEEEcCCCCchhHhHHHHHHhhc-CCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCc---cEEEEEeccc
Q 024042 56 SLVLIHGFGPEAIWQWRKQVQFFA-PHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVE---RFSVVGTSYG 131 (273)
Q Consensus 56 ~vi~~hG~~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~---~i~l~G~S~G 131 (273)
++|++=||.+..........+... .++.++.+-.+-.....+. ......++.+.+.+...... ++.+-.+|.|
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~---~~~~~~~~~l~~~l~~~~~~~~~~il~H~FSnG 77 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWPS---KRLAPAADKLLELLSDSQSASPPPILFHSFSNG 77 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeeec---cchHHHHHHHHHHhhhhccCCCCCEEEEEEECc
Confidence 356666877665344433333332 4588888775521111111 24444455555555554332 7999999998
Q ss_pred hHHHHHHHHh----C------CcccceEEEecCCCCCCCcc-hHHHhhhhhhhhhhhc--cCCCChHHHHHHhhhhhccC
Q 024042 132 GFVAYHMARM----W------PERVEKVVIASSGVNMKRGD-NEALVKRANLERIDHL--MLPESASQLRTLTGLAVSKN 198 (273)
Q Consensus 132 g~~a~~~a~~----~------~~~v~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 198 (273)
|......... . -.+++++|+-+++....... ...+............ ........+...........
T Consensus 78 G~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (240)
T PF05705_consen 78 GSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSARAFSAALPKSSPRWFVPLWPLLQFLLRLSIISYFIFG 157 (240)
T ss_pred hHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHHHHHHHcCccchhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8766554331 1 12389999887765543311 1111110000000000 00000000000000000000
Q ss_pred CCC--------ChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCCCCCcCc-CChhhHHHHHH
Q 024042 199 LDI--------VPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENTSHVPQI-ENPGLFNSIVK 266 (273)
Q Consensus 199 ~~~--------~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~ 266 (273)
... ...........|-++++++.|.+++.+.+++..+.. +-+++...++++.|..+. ++|++..+.+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~ 237 (240)
T PF05705_consen 158 YPDVQEYYRRALNDFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVD 237 (240)
T ss_pred CCcHHHHHHHHHhhhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHH
Confidence 000 000011122248999999999999999888877766 345788889999998665 68999999999
Q ss_pred HHh
Q 024042 267 NFL 269 (273)
Q Consensus 267 ~fl 269 (273)
+|+
T Consensus 238 ~fw 240 (240)
T PF05705_consen 238 EFW 240 (240)
T ss_pred hhC
Confidence 885
No 157
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.87 E-value=2.9e-08 Score=72.23 Aligned_cols=86 Identities=13% Similarity=0.108 Sum_probs=49.9
Q ss_pred CCCeEEEEcCCCCchhHhHHHHHHhhcC---CCeEEeecCCCCCCCCCCCccccHHH----HHHHHHHHHHHhCC--ccE
Q 024042 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAP---HFNVYVPDLIFFGHSTTRSIQRTELF----QAASLGKLLEKIGV--ERF 123 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~~~~~~~~~l~~---~~~v~~~d~~g~g~s~~~~~~~~~~~----~~~~~~~~~~~~~~--~~i 123 (273)
+.-.|||+||+.++. ..|..+...+.. .+.-..+...++.... .....+++. .++.+.+.++.... .++
T Consensus 3 ~~hLvV~vHGL~G~~-~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~-~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~I 80 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNP-ADMRYLKNHLEKIPEDLPNARIVVLGYSNNE-FKTFDGIDVCGERLAEEILEHIKDYESKIRKI 80 (217)
T ss_pred CCEEEEEeCCCCCCH-HHHHHHHHHHHHhhhhcchhhhhhhcccccc-cccchhhHHHHHHHHHHHHHhccccccccccc
Confidence 445899999999998 888777666554 2211122222221111 111123333 34444444444443 489
Q ss_pred EEEEeccchHHHHHHHH
Q 024042 124 SVVGTSYGGFVAYHMAR 140 (273)
Q Consensus 124 ~l~G~S~Gg~~a~~~a~ 140 (273)
.++|||+||.++-.+..
T Consensus 81 sfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 81 SFIGHSLGGLIARYALG 97 (217)
T ss_pred eEEEecccHHHHHHHHH
Confidence 99999999999876655
No 158
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.86 E-value=3.7e-08 Score=72.28 Aligned_cols=108 Identities=19% Similarity=0.251 Sum_probs=68.8
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHH---HhhcCCCeEEeecCCCCCCCCCCC-ccccHHHHHHHHHHHHHHh----CCcc
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQV---QFFAPHFNVYVPDLIFFGHSTTRS-IQRTELFQAASLGKLLEKI----GVER 122 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~---~~l~~~~~v~~~d~~g~g~s~~~~-~~~~~~~~~~~~~~~~~~~----~~~~ 122 (273)
.+++..+||+||+..+........+ ..+.-...++.+.||+.|.-..-. ...+.......+..+++.+ +.++
T Consensus 15 ~~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~ 94 (233)
T PF05990_consen 15 SPDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKR 94 (233)
T ss_pred CCCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCce
Confidence 3567899999999887633333332 333323589999999877532111 1112333344455555544 5689
Q ss_pred EEEEEeccchHHHHHHHHhC----C-----cccceEEEecCCCCC
Q 024042 123 FSVVGTSYGGFVAYHMARMW----P-----ERVEKVVIASSGVNM 158 (273)
Q Consensus 123 i~l~G~S~Gg~~a~~~a~~~----~-----~~v~~~v~~~~~~~~ 158 (273)
|++++||||+.+.+.+.... + .++..+++++|-.+.
T Consensus 95 I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 95 IHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred EEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 99999999999998876542 1 257888888875543
No 159
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.85 E-value=9.6e-08 Score=76.98 Aligned_cols=221 Identities=13% Similarity=0.054 Sum_probs=120.7
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch-hHhHHHHHHhh-cCCCeEEeecCCCCCCCC---CCC-
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA-IWQWRKQVQFF-APHFNVYVPDLIFFGHST---TRS- 99 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~-~~~~~~~~~~l-~~~~~v~~~d~~g~g~s~---~~~- 99 (273)
++..+...||..+.....--+....++++|.+++.+|.-+-. ...|+.--..| ..++.....|.||=|+-. ...
T Consensus 442 ~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G 521 (712)
T KOG2237|consen 442 ERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDG 521 (712)
T ss_pred EEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhcc
Confidence 455666779987654333222223456788888888844322 22343322223 333777778999855432 111
Q ss_pred ----ccccHHHHHHHHHHHHHHh--CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhh
Q 024042 100 ----IQRTELFQAASLGKLLEKI--GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLE 173 (273)
Q Consensus 100 ----~~~~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~ 173 (273)
...+++++...+..+++.- ..++..+.|.|.||.++..+...+|+.++++|+-.|..+........+.... ..
T Consensus 522 ~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL~t~~~tilplt-~s 600 (712)
T KOG2237|consen 522 RLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDVLNTHKDTILPLT-TS 600 (712)
T ss_pred chhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceehhhhhccCccccc-hh
Confidence 1235666665555555532 3478999999999999999999999999999998887765432111111110 11
Q ss_pred hhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh----c------CCcEE
Q 024042 174 RIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL----G------KKARL 243 (273)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~----~------~~~~~ 243 (273)
.+.. ...+.....+.....+.+.+...... ....+|+..+.+|..|.+..+.++.+++ . ++.-+
T Consensus 601 d~ee---~g~p~~~~~~~~i~~y~pv~~i~~q~---~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~~~~q~~pvll 674 (712)
T KOG2237|consen 601 DYEE---WGNPEDFEDLIKISPYSPVDNIKKQV---QYPSMLVTTADHDDRVGPLESLKWVAKLREATCDSLKQTNPVLL 674 (712)
T ss_pred hhcc---cCChhhhhhhheecccCccCCCchhc---cCcceEEeeccCCCcccccchHHHHHHHHHHhhcchhcCCCEEE
Confidence 1111 12222222222222122111111111 1225788889997766655444444443 1 23445
Q ss_pred EEeCCCCCCc
Q 024042 244 EIIENTSHVP 253 (273)
Q Consensus 244 ~~~~~~gH~~ 253 (273)
.+-.++||+.
T Consensus 675 ~i~~~agH~~ 684 (712)
T KOG2237|consen 675 RIETKAGHGA 684 (712)
T ss_pred EEecCCcccc
Confidence 6678899985
No 160
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.80 E-value=1.6e-07 Score=67.54 Aligned_cols=212 Identities=15% Similarity=0.178 Sum_probs=112.7
Q ss_pred CCeEEEEcCCCCchhHhHHH--HH-HhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHH--------HHHHH------
Q 024042 54 KPSLVLIHGFGPEAIWQWRK--QV-QFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASL--------GKLLE------ 116 (273)
Q Consensus 54 ~~~vi~~hG~~~~~~~~~~~--~~-~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~--------~~~~~------ 116 (273)
.+.-|++-|-|.+. ..+. +. +.+.++...++++-|-||+..++..-...-+.+.|+ .+...
T Consensus 113 ~~KOG~~a~tgdh~--y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws~ 190 (371)
T KOG1551|consen 113 ADLCLSWALTGDHV--YTRRLVLSKPINKREIATMVLEKPFYGQRVPEEQIIHMLEYVTDLFKMGRATIQEFVKLFTWSS 190 (371)
T ss_pred CCeeEEEeecCCce--eEeeeeecCchhhhcchheeeecccccccCCHHHHHHHHHHHHHHHHhhHHHHHHHHHhccccc
Confidence 34555555554443 2222 22 334444888999999999887554322222222222 12111
Q ss_pred HhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccC-CCChHHHHHHhh---
Q 024042 117 KIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLML-PESASQLRTLTG--- 192 (273)
Q Consensus 117 ~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--- 192 (273)
..+..+..++|-||||.+|.++...++..|.-+-+.++.......... +.... ......... +......++...
T Consensus 191 ~~g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~~~asvs~teg-~l~~~-~s~~~~~~~~t~~~~~~~r~p~Q~~ 268 (371)
T KOG1551|consen 191 ADGLGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNSSKASVSATEG-LLLQD-TSKMKRFNQTTNKSGYTSRNPAQSY 268 (371)
T ss_pred ccCcccceeeeeecccHHHHhhcccCCCCccccccccccccchhhhhh-hhhhh-hHHHHhhccCcchhhhhhhCchhhH
Confidence 225689999999999999999999887666655555443322211111 11110 000000000 000000000000
Q ss_pred ----hhhccCCCCChhhH----H------hhhhc-----cEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCC-
Q 024042 193 ----LAVSKNLDIVPDFF----F------NDFVH-----DVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHV- 252 (273)
Q Consensus 193 ----~~~~~~~~~~~~~~----~------~~~~~-----p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~- 252 (273)
....++.+.....+ . ..+.. -++++.+++|..+|...+..+.+.+ |++++..++ +||.
T Consensus 269 ~~~~~~~srn~~~E~~~~Mr~vmd~~T~v~~fp~Pvdpsl~ivv~A~~D~Yipr~gv~~lQ~~W-Pg~eVr~~e-gGHVs 346 (371)
T KOG1551|consen 269 HLLSKEQSRNSRKESLIFMRGVMDECTHVANFPVPVDPSLIIVVQAKEDAYIPRTGVRSLQEIW-PGCEVRYLE-GGHVS 346 (371)
T ss_pred HHHHHHhhhcchHHHHHHHHHHHHhhchhhcCCCCCCCCeEEEEEecCCccccccCcHHHHHhC-CCCEEEEee-cCcee
Confidence 00000000000000 0 00111 3577889999999999999999999 999999998 8996
Q ss_pred cCcCChhhHHHHHHHHhcc
Q 024042 253 PQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 253 ~~~~~~~~~~~~i~~fl~~ 271 (273)
..+-+.+.+...|.+-|++
T Consensus 347 ayl~k~dlfRR~I~d~L~R 365 (371)
T KOG1551|consen 347 AYLFKQDLFRRAIVDGLDR 365 (371)
T ss_pred eeehhchHHHHHHHHHHHh
Confidence 4455677888888877754
No 161
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.78 E-value=5e-06 Score=63.81 Aligned_cols=203 Identities=10% Similarity=0.075 Sum_probs=114.8
Q ss_pred ceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch--hHhHHHHHHhhcCC-CeEEeecCCC--CCCCCC---
Q 024042 26 SSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA--IWQWRKQVQFFAPH-FNVYVPDLIF--FGHSTT--- 97 (273)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~--~~~~~~~~~~l~~~-~~v~~~d~~g--~g~s~~--- 97 (273)
+...++..+..-+..+... ........||++||.+.+. ......+-..|.+. +.++++..|. ......
T Consensus 63 e~~~L~~~~~~flaL~~~~----~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~ 138 (310)
T PF12048_consen 63 EVQWLQAGEERFLALWRPA----NSAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRAT 138 (310)
T ss_pred hcEEeecCCEEEEEEEecc----cCCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCC
Confidence 3445555344444555443 3345566999999998775 13345556677776 9999998886 110000
Q ss_pred -------------CCc--c---------ccH----HHH---HHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCc-c
Q 024042 98 -------------RSI--Q---------RTE----LFQ---AASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPE-R 145 (273)
Q Consensus 98 -------------~~~--~---------~~~----~~~---~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~-~ 145 (273)
... . ... ... .+.+.++.+..+..+++|+||+.|+..+..+....+. .
T Consensus 139 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~ 218 (310)
T PF12048_consen 139 EAEEVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPM 218 (310)
T ss_pred CCCCCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcc
Confidence 000 0 001 111 2223333334465679999999999999999988754 4
Q ss_pred cceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCC
Q 024042 146 VEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIF 225 (273)
Q Consensus 146 v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~ 225 (273)
++++|++++........ . .-...+.++..|+|=|++.+...
T Consensus 219 ~daLV~I~a~~p~~~~n----------------------~----------------~l~~~la~l~iPvLDi~~~~~~~- 259 (310)
T PF12048_consen 219 PDALVLINAYWPQPDRN----------------------P----------------ALAEQLAQLKIPVLDIYSADNPA- 259 (310)
T ss_pred cCeEEEEeCCCCcchhh----------------------h----------------hHHHHhhccCCCEEEEecCCChH-
Confidence 89999999865432210 0 00112233344999999887322
Q ss_pred ChHHHHH---HHHHh-cCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 226 PLKMATE---LKELL-GKKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 226 ~~~~~~~---~~~~~-~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
....+.. +.++. ..+.+.+.+.+..|.... ..+.+.+.|..||+++
T Consensus 260 ~~~~a~~R~~~a~r~~~~~YrQ~~L~~~~~~~~~-~~~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 260 SQQTAKQRKQAAKRNKKPDYRQIQLPGLPDNPSG-WQEQLLRRIRGWLKRH 309 (310)
T ss_pred HHHHHHHHHHHHHhccCCCceeEecCCCCCChhh-HHHHHHHHHHHHHHhh
Confidence 2221111 11111 244566667766665422 2334889999999865
No 162
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.71 E-value=4e-07 Score=63.34 Aligned_cols=198 Identities=17% Similarity=0.178 Sum_probs=107.2
Q ss_pred ceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHH--HHHHhh-cCC-CeEEeecCCCCCCCCCCC------------
Q 024042 36 TTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWR--KQVQFF-APH-FNVYVPDLIFFGHSTTRS------------ 99 (273)
Q Consensus 36 ~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~--~~~~~l-~~~-~~v~~~d~~g~g~s~~~~------------ 99 (273)
..+.+-.+-|+..+.+.+-|++.++.|...+. +.+- .-.+.. ++. +.|+.+|-.=.|-.-...
T Consensus 26 c~Mtf~vylPp~a~~~k~~P~lf~LSGLTCT~-~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGF 104 (283)
T KOG3101|consen 26 CSMTFGVYLPPDAPRGKRCPVLFYLSGLTCTH-ENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGF 104 (283)
T ss_pred cceEEEEecCCCcccCCcCceEEEecCCcccc-hhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCcee
Confidence 34444444444444455679999999998877 4332 122222 233 788888864322211000
Q ss_pred ----------cccc-HHHHHHHHHHHHHH----hCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchH
Q 024042 100 ----------IQRT-ELFQAASLGKLLEK----IGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNE 164 (273)
Q Consensus 100 ----------~~~~-~~~~~~~~~~~~~~----~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~ 164 (273)
..+. .+..++.+.+++.. ++..++.++||||||+=|+-.+.+.|.+.+++...+|..++..-.+.
T Consensus 105 YvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~~cpWG 184 (283)
T KOG3101|consen 105 YVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPINCPWG 184 (283)
T ss_pred EEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcccCcch
Confidence 0011 12234444454442 23467999999999999999999999998888887776654432211
Q ss_pred HHhhhhhhhhhhhccCCCChHHHHHHhhhhhccCCCCChhhHHhhhh---ccEEEEecCCCCCCChH-HHHHHHHHhc--
Q 024042 165 ALVKRANLERIDHLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFV---HDVLIVWGDQDQIFPLK-MATELKELLG-- 238 (273)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~p~l~i~g~~D~~~~~~-~~~~~~~~~~-- 238 (273)
. ..+.. ........+..+- +..+++.+. ..+||=.|+.|.+...+ .-+.+.++..
T Consensus 185 q-------KAf~g-YLG~~ka~W~~yD-----------at~lik~y~~~~~~ilIdqG~~D~Fl~~qLlPe~l~~a~~~~ 245 (283)
T KOG3101|consen 185 Q-------KAFTG-YLGDNKAQWEAYD-----------ATHLIKNYRGVGDDILIDQGAADNFLAEQLLPENLLEACKAT 245 (283)
T ss_pred H-------HHhhc-ccCCChHHHhhcc-----------hHHHHHhcCCCCccEEEecCccchhhhhhcChHHHHHHhhcc
Confidence 1 01111 1222333222221 112222221 15788899999987633 2233444431
Q ss_pred --CCcEEEEeCCCCCCc
Q 024042 239 --KKARLEIIENTSHVP 253 (273)
Q Consensus 239 --~~~~~~~~~~~gH~~ 253 (273)
....+...++-+|..
T Consensus 246 ~~~~v~~r~~~gyDHSY 262 (283)
T KOG3101|consen 246 WQAPVVFRLQEGYDHSY 262 (283)
T ss_pred ccccEEEEeecCCCcce
Confidence 235566778888953
No 163
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=98.71 E-value=1.6e-05 Score=63.84 Aligned_cols=129 Identities=16% Similarity=0.176 Sum_probs=78.0
Q ss_pred eeEEecC--CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHH---HH-------------hh-------cCC
Q 024042 27 SQTIDID--DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQ---VQ-------------FF-------APH 81 (273)
Q Consensus 27 ~~~~~~~--~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~---~~-------------~l-------~~~ 81 (273)
.-++++. .+..+.||...++. .....|+|+++-|.++++ ..+..+ .+ .+ .+.
T Consensus 39 sGy~~v~~~~~~~lfy~f~es~~--~~~~~P~~lWlnGGPG~S-S~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~ 115 (433)
T PLN03016 39 TGYIGIGEDENVQFFYYFIKSEN--NPKEDPLLIWLNGGPGCS-CLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKM 115 (433)
T ss_pred EEEEEecCCCCeEEEEEEEecCC--CcccCCEEEEEcCCCcHH-HHHHHHHhcCCceeeccccCCCCCceeeCCCchhhc
Confidence 3355553 35678888876432 245679999999998877 432211 11 11 123
Q ss_pred CeEEeecCC-CCCCCCCCCcc-c-cHHHHHHHHHHHHHH----h---CCccEEEEEeccchHHHHHHHHh----C-----
Q 024042 82 FNVYVPDLI-FFGHSTTRSIQ-R-TELFQAASLGKLLEK----I---GVERFSVVGTSYGGFVAYHMARM----W----- 142 (273)
Q Consensus 82 ~~v~~~d~~-g~g~s~~~~~~-~-~~~~~~~~~~~~~~~----~---~~~~i~l~G~S~Gg~~a~~~a~~----~----- 142 (273)
.+++.+|.| |.|.|...... . +..+.++++..+++. . ...+++|.|.|+||..+-.+|.. .
T Consensus 116 anllfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~ 195 (433)
T PLN03016 116 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 195 (433)
T ss_pred CcEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccC
Confidence 689999965 88888643321 1 111223444444443 2 33789999999999866665543 1
Q ss_pred -CcccceEEEecCCCCC
Q 024042 143 -PERVEKVVIASSGVNM 158 (273)
Q Consensus 143 -~~~v~~~v~~~~~~~~ 158 (273)
+-.++|+++-+|....
T Consensus 196 ~~inLkGi~iGNg~t~~ 212 (433)
T PLN03016 196 PPINLQGYMLGNPVTYM 212 (433)
T ss_pred CcccceeeEecCCCcCc
Confidence 1247899998886544
No 164
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.65 E-value=8.4e-07 Score=62.30 Aligned_cols=104 Identities=14% Similarity=0.109 Sum_probs=73.7
Q ss_pred CCCeEEEEcCCCCch--hHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCC----ccEEE
Q 024042 53 KKPSLVLIHGFGPEA--IWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGV----ERFSV 125 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~--~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~----~~i~l 125 (273)
.+..|||+-|.+..- ......+...|.+. |..+-+.++.+-. .-...+.++.++++..++++++. ..|+|
T Consensus 35 ~~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~---G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL 111 (299)
T KOG4840|consen 35 ESVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYN---GYGTFSLKDDVEDLKCLLEHIQLCGFSTDVVL 111 (299)
T ss_pred eEEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecccccc---ccccccccccHHHHHHHHHHhhccCcccceEE
Confidence 346789999987654 12335666777776 9998888762211 11223667778899999998744 48999
Q ss_pred EEeccchHHHHHHHHh--CCcccceEEEecCCCCCC
Q 024042 126 VGTSYGGFVAYHMARM--WPERVEKVVIASSGVNMK 159 (273)
Q Consensus 126 ~G~S~Gg~~a~~~a~~--~~~~v~~~v~~~~~~~~~ 159 (273)
+|||-|+.-.+.+... .+..+.+.|+-+|..+..
T Consensus 112 ~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 112 VGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred EecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 9999999988888733 356688889888877643
No 165
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.65 E-value=1e-07 Score=71.50 Aligned_cols=54 Identities=24% Similarity=0.341 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHh-CC--ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCC
Q 024042 106 FQAASLGKLLEKI-GV--ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMK 159 (273)
Q Consensus 106 ~~~~~~~~~~~~~-~~--~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~ 159 (273)
...+++...++.. .. ++..++|+||||..|+.++.++|+.+.+++.++|.....
T Consensus 97 ~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 97 FLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDPS 153 (251)
T ss_dssp HHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESETT
T ss_pred ehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcccccc
Confidence 3455666666554 32 237999999999999999999999999999999876544
No 166
>PLN02209 serine carboxypeptidase
Probab=98.65 E-value=1.2e-05 Score=64.52 Aligned_cols=127 Identities=16% Similarity=0.212 Sum_probs=78.3
Q ss_pred EEecC--CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHH----------------hh-------cCCCe
Q 024042 29 TIDID--DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQ----------------FF-------APHFN 83 (273)
Q Consensus 29 ~~~~~--~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~----------------~l-------~~~~~ 83 (273)
++++. .+..+.||...++. .....|+|+++-|.++++ ..+..+.+ .+ .+..+
T Consensus 43 y~~v~~~~~~~lf~~f~es~~--~~~~~Pl~lWlnGGPG~S-S~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~an 119 (437)
T PLN02209 43 YIGIGEEENVQFFYYFIKSDK--NPQEDPLIIWLNGGPGCS-CLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTAN 119 (437)
T ss_pred EEEecCCCCeEEEEEEEecCC--CCCCCCEEEEECCCCcHH-HhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCc
Confidence 55553 35678888775432 244679999999998877 44432211 11 12267
Q ss_pred EEeecCC-CCCCCCCCCc--cccHHHHHHHHHHHHHHh-------CCccEEEEEeccchHHHHHHHHh----C------C
Q 024042 84 VYVPDLI-FFGHSTTRSI--QRTELFQAASLGKLLEKI-------GVERFSVVGTSYGGFVAYHMARM----W------P 143 (273)
Q Consensus 84 v~~~d~~-g~g~s~~~~~--~~~~~~~~~~~~~~~~~~-------~~~~i~l~G~S~Gg~~a~~~a~~----~------~ 143 (273)
++.+|.| |.|.|..... ..+.++.++++..+++.. ..++++|.|.|+||..+-.+|.. . +
T Consensus 120 llfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~ 199 (437)
T PLN02209 120 IIFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPP 199 (437)
T ss_pred EEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCc
Confidence 8999965 8888753322 122223345555555543 23689999999999866555543 1 1
Q ss_pred cccceEEEecCCCCC
Q 024042 144 ERVEKVVIASSGVNM 158 (273)
Q Consensus 144 ~~v~~~v~~~~~~~~ 158 (273)
-.++++++.++..+.
T Consensus 200 inl~Gi~igng~td~ 214 (437)
T PLN02209 200 INLQGYVLGNPITHI 214 (437)
T ss_pred eeeeeEEecCcccCh
Confidence 247899998887654
No 167
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.64 E-value=2.2e-07 Score=72.17 Aligned_cols=102 Identities=24% Similarity=0.229 Sum_probs=76.1
Q ss_pred CCeEEEEcCCCCchhHhHHHHHHhhcCC-Ce---EEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEec
Q 024042 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPH-FN---VYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTS 129 (273)
Q Consensus 54 ~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~---v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S 129 (273)
.-+++++||++.+. ..|..+...+... +. +..+++++. +.........+.....+.+++...+.+++.++|||
T Consensus 59 ~~pivlVhG~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~ql~~~V~~~l~~~ga~~v~LigHS 135 (336)
T COG1075 59 KEPIVLVHGLGGGY-GNFLPLDYRLAILGWLTNGVYAFELSGG--DGTYSLAVRGEQLFAYVDEVLAKTGAKKVNLIGHS 135 (336)
T ss_pred CceEEEEccCcCCc-chhhhhhhhhcchHHHhccccccccccc--CCCccccccHHHHHHHHHHHHhhcCCCceEEEeec
Confidence 45899999997776 7777777666654 55 788887754 22222233455556666677777788999999999
Q ss_pred cchHHHHHHHHhCC--cccceEEEecCCCCC
Q 024042 130 YGGFVAYHMARMWP--ERVEKVVIASSGVNM 158 (273)
Q Consensus 130 ~Gg~~a~~~a~~~~--~~v~~~v~~~~~~~~ 158 (273)
+||..+..++...+ .+|+.++.++++-..
T Consensus 136 ~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~G 166 (336)
T COG1075 136 MGGLDSRYYLGVLGGANRVASVVTLGTPHHG 166 (336)
T ss_pred ccchhhHHHHhhcCccceEEEEEEeccCCCC
Confidence 99999999999887 789999999876543
No 168
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.61 E-value=4.7e-06 Score=67.97 Aligned_cols=225 Identities=13% Similarity=0.025 Sum_probs=122.0
Q ss_pred EEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch-hHhHHHH-HHhhcCCCeEEeecCCCCCCCCCC--------
Q 024042 29 TIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA-IWQWRKQ-VQFFAPHFNVYVPDLIFFGHSTTR-------- 98 (273)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~-~~~~~~~-~~~l~~~~~v~~~d~~g~g~s~~~-------- 98 (273)
.++..||+++.....--+.-..+++.|.+++--|.-+.. ...|... +..+.+++.-.....||=|.-...
T Consensus 423 wa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l 502 (682)
T COG1770 423 WATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLL 502 (682)
T ss_pred EEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhh
Confidence 344458877653221101112356778888888744333 1223322 233444455555667775543211
Q ss_pred CccccHHHHHHHHHHHHHHh--CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhh
Q 024042 99 SIQRTELFQAASLGKLLEKI--GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERID 176 (273)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (273)
....++.++.+....+++.- ..++++++|-|.||++....+...|+.++++|+-.|.++........-. ......+.
T Consensus 503 ~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltTMlD~sl-PLT~~E~~ 581 (682)
T COG1770 503 NKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLDPSL-PLTVTEWD 581 (682)
T ss_pred hccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhhhcCCCC-CCCccchh
Confidence 12236667666666666542 2368999999999999999999999999999999888775432211100 01112233
Q ss_pred hccCCCChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHh---cCCc---EEEEeCCCC
Q 024042 177 HLMLPESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELL---GKKA---RLEIIENTS 250 (273)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~---~~~~~~~~g 250 (273)
.+-.|..+.....+..-.-+.+ ...+-..++|+..|..|+.|..-...++.+++ +.+. -+.+=-++|
T Consensus 582 EWGNP~d~e~y~yikSYSPYdN-------V~a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td~~plLlkt~M~aG 654 (682)
T COG1770 582 EWGNPLDPEYYDYIKSYSPYDN-------VEAQPYPAILVTTGLNDPRVQYWEPAKWVAKLRELKTDGNPLLLKTNMDAG 654 (682)
T ss_pred hhCCcCCHHHHHHHhhcCchhc-------cccCCCCceEEEccccCCccccchHHHHHHHHhhcccCCCcEEEEeccccc
Confidence 3334443333333222111111 01122227899999999999776555555555 1122 222213589
Q ss_pred CCcCcCChhhH
Q 024042 251 HVPQIENPGLF 261 (273)
Q Consensus 251 H~~~~~~~~~~ 261 (273)
|...-...+.+
T Consensus 655 HgG~SgRf~~l 665 (682)
T COG1770 655 HGGASGRFQRL 665 (682)
T ss_pred CCCCCCchHHH
Confidence 97655444433
No 169
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.61 E-value=4.3e-07 Score=68.68 Aligned_cols=107 Identities=19% Similarity=0.254 Sum_probs=67.5
Q ss_pred CCCCeEEEEcCCCCchhHhHHHHHHh---hcCCCeEEeecCCCCCCCCCCCcc-ccHHHHHHHHHHHHHHh----CCccE
Q 024042 52 LKKPSLVLIHGFGPEAIWQWRKQVQF---FAPHFNVYVPDLIFFGHSTTRSIQ-RTELFQAASLGKLLEKI----GVERF 123 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~~~~~~~~~~~---l~~~~~v~~~d~~g~g~s~~~~~~-~~~~~~~~~~~~~~~~~----~~~~i 123 (273)
..+..++|+||+..+-...-.+.++- .......+.+.||..|.--.-..+ .+...-..++..+++.+ ..++|
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I 193 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRI 193 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceE
Confidence 46779999999886663333333332 333378899999976653221111 12222233444444444 56889
Q ss_pred EEEEeccchHHHHHHHHhC--------CcccceEEEecCCCCC
Q 024042 124 SVVGTSYGGFVAYHMARMW--------PERVEKVVIASSGVNM 158 (273)
Q Consensus 124 ~l~G~S~Gg~~a~~~a~~~--------~~~v~~~v~~~~~~~~ 158 (273)
+|++||||..+++....+. +.+++-+|+.+|-.+.
T Consensus 194 ~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~ 236 (377)
T COG4782 194 YLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDV 236 (377)
T ss_pred EEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCCh
Confidence 9999999999999887652 3457788888775554
No 170
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.60 E-value=3.4e-07 Score=74.01 Aligned_cols=129 Identities=16% Similarity=0.097 Sum_probs=89.7
Q ss_pred eeEEecCCcceEEeecCCccCCCCCCCCCeEEEEc--CCCCch--hHhHHHHHH---hhcCC-CeEEeecCCCCCCCCCC
Q 024042 27 SQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIH--GFGPEA--IWQWRKQVQ---FFAPH-FNVYVPDLIFFGHSTTR 98 (273)
Q Consensus 27 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~h--G~~~~~--~~~~~~~~~---~l~~~-~~v~~~d~~g~g~s~~~ 98 (273)
...|...||++|+...+.| ...++.|+++..+ ...-.. ...-....+ .+..+ |.|+..|.||.|.|.+.
T Consensus 21 ~v~V~MRDGvrL~~dIy~P---a~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~ 97 (563)
T COG2936 21 DVMVPMRDGVRLAADIYRP---AGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGV 97 (563)
T ss_pred eeeEEecCCeEEEEEEEcc---CCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcc
Confidence 3567778999999888763 3357788888888 322210 011112233 34455 99999999999999976
Q ss_pred Cccc-c-HHHHHHHHHHHHHHhCC--ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCC
Q 024042 99 SIQR-T-ELFQAASLGKLLEKIGV--ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNM 158 (273)
Q Consensus 99 ~~~~-~-~~~~~~~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~ 158 (273)
.... + ..+..-|+.+++.+... .+|..+|.|++|...+.+|+..|.-+++++...+..+.
T Consensus 98 ~~~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~ 161 (563)
T COG2936 98 FDPESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDR 161 (563)
T ss_pred cceeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeeccccccccc
Confidence 5543 2 22334445555554433 78999999999999999999988889999988877664
No 171
>PLN02606 palmitoyl-protein thioesterase
Probab=98.58 E-value=1.1e-05 Score=60.30 Aligned_cols=97 Identities=21% Similarity=0.215 Sum_probs=61.1
Q ss_pred CCeEEEEcCCC--CchhHhHHHHHHhhc--CCCeEEeecCCCCCCCCCCCcc-ccHHHHHHHHHHHHH---HhCCccEEE
Q 024042 54 KPSLVLIHGFG--PEAIWQWRKQVQFFA--PHFNVYVPDLIFFGHSTTRSIQ-RTELFQAASLGKLLE---KIGVERFSV 125 (273)
Q Consensus 54 ~~~vi~~hG~~--~~~~~~~~~~~~~l~--~~~~v~~~d~~g~g~s~~~~~~-~~~~~~~~~~~~~~~---~~~~~~i~l 125 (273)
..+||++||.| .+. .....+.+.+. ....+..+. .|-+. .... ....++++.+-+.+. .+. +-+.+
T Consensus 26 ~~PvViwHGlgD~~~~-~~~~~~~~~i~~~~~~pg~~v~-ig~~~---~~s~~~~~~~Qv~~vce~l~~~~~L~-~G~na 99 (306)
T PLN02606 26 SVPFVLFHGFGGECSN-GKVSNLTQFLINHSGYPGTCVE-IGNGV---QDSLFMPLRQQASIACEKIKQMKELS-EGYNI 99 (306)
T ss_pred CCCEEEECCCCcccCC-chHHHHHHHHHhCCCCCeEEEE-ECCCc---ccccccCHHHHHHHHHHHHhcchhhc-CceEE
Confidence 45899999998 444 46666766665 244333333 22222 1111 234444444433333 232 45999
Q ss_pred EEeccchHHHHHHHHhCCc--ccceEEEecCCC
Q 024042 126 VGTSYGGFVAYHMARMWPE--RVEKVVIASSGV 156 (273)
Q Consensus 126 ~G~S~Gg~~a~~~a~~~~~--~v~~~v~~~~~~ 156 (273)
+|+|.||.++-.++++.|+ .|+.+|.++++-
T Consensus 100 IGfSQGglflRa~ierc~~~p~V~nlISlggph 132 (306)
T PLN02606 100 VAESQGNLVARGLIEFCDNAPPVINYVSLGGPH 132 (306)
T ss_pred EEEcchhHHHHHHHHHCCCCCCcceEEEecCCc
Confidence 9999999999999999876 499999988654
No 172
>COG0627 Predicted esterase [General function prediction only]
Probab=98.55 E-value=3.9e-06 Score=64.06 Aligned_cols=108 Identities=19% Similarity=0.111 Sum_probs=65.5
Q ss_pred CCCCCeEEEEcCCCCchhHhH---HHHHHhhcCC-CeEEeecCC--------------CCCCCCCCCc--------cccH
Q 024042 51 TLKKPSLVLIHGFGPEAIWQW---RKQVQFFAPH-FNVYVPDLI--------------FFGHSTTRSI--------QRTE 104 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~---~~~~~~l~~~-~~v~~~d~~--------------g~g~s~~~~~--------~~~~ 104 (273)
+.+-|+++++||..++. ..+ ..+-...... +.++.+|-. |-+.|-.... .+..
T Consensus 51 ~~~ipV~~~l~G~t~~~-~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~ 129 (316)
T COG0627 51 GRDIPVLYLLSGLTCNE-PNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQW 129 (316)
T ss_pred CCCCCEEEEeCCCCCCC-CceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccch
Confidence 56778999999987764 222 1222222222 555555322 2222221110 1222
Q ss_pred HH-HHHHHHHHHHHhCC-----ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCC
Q 024042 105 LF-QAASLGKLLEKIGV-----ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMK 159 (273)
Q Consensus 105 ~~-~~~~~~~~~~~~~~-----~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~ 159 (273)
+. ..+.+-..+++... ++..++||||||.-|+.+|.++|++++.+...++.....
T Consensus 130 ~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 130 ETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred hHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 22 34555544443322 268999999999999999999999999999988877765
No 173
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.53 E-value=6.4e-07 Score=74.01 Aligned_cols=124 Identities=15% Similarity=0.074 Sum_probs=74.1
Q ss_pred cCCcceEEeecCCccCCCCCCCCCeEEEEcCCCC---chhH-hHHHHHHhhcCCCeEEeecCC----CCCCCCCC--Ccc
Q 024042 32 IDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGP---EAIW-QWRKQVQFFAPHFNVYVPDLI----FFGHSTTR--SIQ 101 (273)
Q Consensus 32 ~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~---~~~~-~~~~~~~~l~~~~~v~~~d~~----g~g~s~~~--~~~ 101 (273)
.+|...+..+... .....++.|+||++||.+. +... ....++.... .+.|+.+++| |+...... ...
T Consensus 75 sEdcl~l~i~~p~--~~~~~~~~pv~v~ihGG~~~~g~~~~~~~~~~~~~~~-~~~vv~~~yRlg~~g~~~~~~~~~~~n 151 (493)
T cd00312 75 SEDCLYLNVYTPK--NTKPGNSLPVMVWIHGGGFMFGSGSLYPGDGLAREGD-NVIVVSINYRLGVLGFLSTGDIELPGN 151 (493)
T ss_pred CCcCCeEEEEeCC--CCCCCCCCCEEEEEcCCccccCCCCCCChHHHHhcCC-CEEEEEecccccccccccCCCCCCCcc
Confidence 3466677777653 1112456799999999542 2201 1222222211 3889999999 33322211 112
Q ss_pred c---cHHHHHHHHHHHHHHhC--CccEEEEEeccchHHHHHHHHhC--CcccceEEEecCCCCC
Q 024042 102 R---TELFQAASLGKLLEKIG--VERFSVVGTSYGGFVAYHMARMW--PERVEKVVIASSGVNM 158 (273)
Q Consensus 102 ~---~~~~~~~~~~~~~~~~~--~~~i~l~G~S~Gg~~a~~~a~~~--~~~v~~~v~~~~~~~~ 158 (273)
. +.....+++.+.++.++ .++|.|+|+|.||..+..++... +..++++|+.++....
T Consensus 152 ~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~~ 215 (493)
T cd00312 152 YGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSALS 215 (493)
T ss_pred hhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCccC
Confidence 2 33334455555566654 47899999999999998887762 3458888888775543
No 174
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=98.51 E-value=0.00011 Score=58.85 Aligned_cols=128 Identities=16% Similarity=0.135 Sum_probs=80.5
Q ss_pred eEEecC--CcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHHHHhh-------------------cCCCeEEe
Q 024042 28 QTIDID--DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQVQFF-------------------APHFNVYV 86 (273)
Q Consensus 28 ~~~~~~--~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l-------------------~~~~~v~~ 86 (273)
-++.+. .+..|.||...++ .....+|.||.+-|+++++ ..- .+..++ .+...++-
T Consensus 47 GYv~v~~~~~~~LFYwf~eS~--~~P~~dPlvLWLnGGPGCS-Sl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLf 122 (454)
T KOG1282|consen 47 GYVTVNESEGRQLFYWFFESE--NNPETDPLVLWLNGGPGCS-SLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILF 122 (454)
T ss_pred ceEECCCCCCceEEEEEEEcc--CCCCCCCEEEEeCCCCCcc-chh-hhhhhcCCeEEcCCCCcceeCCccccccccEEE
Confidence 366765 5788999988643 2245678999999998877 332 222221 12257888
Q ss_pred ecCC-CCCCCCCCCcc---ccHHHHHHHHHHHH----HHh---CCccEEEEEeccchHHHHHHHHh----CC------cc
Q 024042 87 PDLI-FFGHSTTRSIQ---RTELFQAASLGKLL----EKI---GVERFSVVGTSYGGFVAYHMARM----WP------ER 145 (273)
Q Consensus 87 ~d~~-g~g~s~~~~~~---~~~~~~~~~~~~~~----~~~---~~~~i~l~G~S~Gg~~a~~~a~~----~~------~~ 145 (273)
+|.| |.|.|-..... .+.+..++|...++ ++. ..+++.|.|-|++|+..-.+|.+ .. -.
T Consensus 123 Ld~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iN 202 (454)
T KOG1282|consen 123 LDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNIN 202 (454)
T ss_pred EecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCccc
Confidence 9988 77776533321 23444455544444 333 34789999999999766665543 21 24
Q ss_pred cceEEEecCCCCCC
Q 024042 146 VEKVVIASSGVNMK 159 (273)
Q Consensus 146 v~~~v~~~~~~~~~ 159 (273)
++|+++-+|..+..
T Consensus 203 LkG~~IGNg~td~~ 216 (454)
T KOG1282|consen 203 LKGYAIGNGLTDPE 216 (454)
T ss_pred ceEEEecCcccCcc
Confidence 78888888766543
No 175
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.50 E-value=1.9e-06 Score=66.27 Aligned_cols=67 Identities=25% Similarity=0.422 Sum_probs=52.7
Q ss_pred Hhhhh-ccEEEEecCCCCCCChHHHHHHHHHhcC-CcEEEEeCCCCCCcCcCChh---hHHHHHHHHhcccC
Q 024042 207 FNDFV-HDVLIVWGDQDQIFPLKMATELKELLGK-KARLEIIENTSHVPQIENPG---LFNSIVKNFLRGSL 273 (273)
Q Consensus 207 ~~~~~-~p~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~---~~~~~i~~fl~~~l 273 (273)
..++. .|+|+++|.+|..+|......+.+.... ..+...+++++|........ +..+.+.+|+.+.+
T Consensus 227 ~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 227 AEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred HhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHhc
Confidence 33444 5999999999999999999999888844 56888889999987654333 67788889988754
No 176
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.50 E-value=5.4e-06 Score=59.14 Aligned_cols=81 Identities=12% Similarity=0.214 Sum_probs=53.7
Q ss_pred CCCeEEEEcCCCCchhHhHHHHHHhhcCCCe-EEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEeccc
Q 024042 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPHFN-VYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYG 131 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~-v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~G 131 (273)
++..|||+.|||.+. ..+..+. +..++. ++++|||..-. +. + -.+.+++.|+++|||
T Consensus 10 ~~~LilfF~GWg~d~-~~f~hL~--~~~~~D~l~~yDYr~l~~--------d~-----~------~~~y~~i~lvAWSmG 67 (213)
T PF04301_consen 10 GKELILFFAGWGMDP-SPFSHLI--LPENYDVLICYDYRDLDF--------DF-----D------LSGYREIYLVAWSMG 67 (213)
T ss_pred CCeEEEEEecCCCCh-HHhhhcc--CCCCccEEEEecCccccc--------cc-----c------cccCceEEEEEEeHH
Confidence 357999999999988 6655543 234454 45678872211 10 1 124589999999999
Q ss_pred hHHHHHHHHhCCcccceEEEecCCCC
Q 024042 132 GFVAYHMARMWPERVEKVVIASSGVN 157 (273)
Q Consensus 132 g~~a~~~a~~~~~~v~~~v~~~~~~~ 157 (273)
=.+|..+....| ++..+.+++...
T Consensus 68 Vw~A~~~l~~~~--~~~aiAINGT~~ 91 (213)
T PF04301_consen 68 VWAANRVLQGIP--FKRAIAINGTPY 91 (213)
T ss_pred HHHHHHHhccCC--cceeEEEECCCC
Confidence 999988876543 666677766543
No 177
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.49 E-value=3.2e-06 Score=70.13 Aligned_cols=127 Identities=18% Similarity=0.110 Sum_probs=70.2
Q ss_pred EEecCCcceEEeecCCccC---CCCCCCCCeEEEEcCCCCchhHhHHHHHHhhc-----------------CCCeEEeec
Q 024042 29 TIDIDDETTLHFWGPKLED---DHKTLKKPSLVLIHGFGPEAIWQWRKQVQFFA-----------------PHFNVYVPD 88 (273)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~---~~~~~~~~~vi~~hG~~~~~~~~~~~~~~~l~-----------------~~~~v~~~d 88 (273)
.-+..+...++.|..|... ...+-++-+|+|++|..|+. .+.+.++.... .+++.+++|
T Consensus 61 ~t~~a~kY~LYLY~Egs~~~e~~~lelsGIPVLFIPGNAGSy-KQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVD 139 (973)
T KOG3724|consen 61 LTPQADKYSLYLYREGSRWWERSTLELSGIPVLFIPGNAGSY-KQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVD 139 (973)
T ss_pred ccCCCCceEEEEecccccccccccccCCCceEEEecCCCCch-HHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEc
Confidence 3333355556655544221 11233567999999998888 66665553322 126777777
Q ss_pred CCCCCCCCCCCccccHHHHHHHHHHHHHH----h-C--------CccEEEEEeccchHHHHHHHHh---CCcccceEEEe
Q 024042 89 LIFFGHSTTRSIQRTELFQAASLGKLLEK----I-G--------VERFSVVGTSYGGFVAYHMARM---WPERVEKVVIA 152 (273)
Q Consensus 89 ~~g~g~s~~~~~~~~~~~~~~~~~~~~~~----~-~--------~~~i~l~G~S~Gg~~a~~~a~~---~~~~v~~~v~~ 152 (273)
+-+-- .........++++-+.+.++. . + ...|+++||||||.+|..++.. .++.|.-++..
T Consensus 140 FnEe~---tAm~G~~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITl 216 (973)
T KOG3724|consen 140 FNEEF---TAMHGHILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITL 216 (973)
T ss_pred ccchh---hhhccHhHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhh
Confidence 75300 001112444444443333332 2 1 2459999999999999777653 23446666666
Q ss_pred cCCCCCC
Q 024042 153 SSGVNMK 159 (273)
Q Consensus 153 ~~~~~~~ 159 (273)
+++...+
T Consensus 217 ssPH~a~ 223 (973)
T KOG3724|consen 217 SSPHAAP 223 (973)
T ss_pred cCcccCC
Confidence 6554433
No 178
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.43 E-value=3.9e-06 Score=65.10 Aligned_cols=149 Identities=16% Similarity=0.174 Sum_probs=93.5
Q ss_pred HHHHHHHh---CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCC------
Q 024042 111 LGKLLEKI---GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLP------ 181 (273)
Q Consensus 111 ~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 181 (273)
+.++++.. .++++++.|.|-=|..++..|.. ..||++++-+.-.............+..+. .+...+.+
T Consensus 159 vq~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa~-D~RV~aivP~Vid~LN~~~~l~h~y~~yG~-~ws~a~~dY~~~gi 236 (367)
T PF10142_consen 159 VQEFLKKKFGVNIEKFVVTGASKRGWTTWLTAAV-DPRVKAIVPIVIDVLNMKANLEHQYRSYGG-NWSFAFQDYYNEGI 236 (367)
T ss_pred HHHHHHhhcCCCccEEEEeCCchHhHHHHHhhcc-CcceeEEeeEEEccCCcHHHHHHHHHHhCC-CCccchhhhhHhCc
Confidence 34444444 56899999999999999999995 468998887654332211111111111110 00000000
Q ss_pred ---CChHHHHHHhhhhhccCCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCCh
Q 024042 182 ---ESASQLRTLTGLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENP 258 (273)
Q Consensus 182 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 258 (273)
.....+..+.. -..|-....++..|-++|.|..|++..++....+.+.++....+..+||++|....
T Consensus 237 ~~~l~tp~f~~L~~-------ivDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~--- 306 (367)
T PF10142_consen 237 TQQLDTPEFDKLMQ-------IVDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG--- 306 (367)
T ss_pred hhhcCCHHHHHHHH-------hcCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch---
Confidence 01111111111 11344555677779999999999999999999999999667788899999998654
Q ss_pred hhHHHHHHHHhcc
Q 024042 259 GLFNSIVKNFLRG 271 (273)
Q Consensus 259 ~~~~~~i~~fl~~ 271 (273)
..+.+.+..|+..
T Consensus 307 ~~~~~~l~~f~~~ 319 (367)
T PF10142_consen 307 SDVVQSLRAFYNR 319 (367)
T ss_pred HHHHHHHHHHHHH
Confidence 5666777777754
No 179
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.42 E-value=2.3e-06 Score=69.48 Aligned_cols=105 Identities=20% Similarity=0.162 Sum_probs=67.4
Q ss_pred CCCeEEEEcCCCCchhHh--HHHHHHhhcCC--CeEEeecCCCCCCCCCCCc-------cccHHHHHHHHHHHHHHhC--
Q 024042 53 KKPSLVLIHGFGPEAIWQ--WRKQVQFFAPH--FNVYVPDLIFFGHSTTRSI-------QRTELFQAASLGKLLEKIG-- 119 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~~--~~~~~~~l~~~--~~v~~~d~~g~g~s~~~~~-------~~~~~~~~~~~~~~~~~~~-- 119 (273)
++|++|++.|=+ ..... ...+...|++. -.+++++.|.+|.|.+... ..+.++..+|+..+++++.
T Consensus 28 ~gpifl~~ggE~-~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~ 106 (434)
T PF05577_consen 28 GGPIFLYIGGEG-PIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKK 106 (434)
T ss_dssp TSEEEEEE--SS--HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCC-ccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHh
Confidence 366666665533 32121 12244455554 6899999999999986433 2377788888888887652
Q ss_pred -----CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCC
Q 024042 120 -----VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNM 158 (273)
Q Consensus 120 -----~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~ 158 (273)
..|++++|-|+||.+|..+-.++|+.+.+.+..++++..
T Consensus 107 ~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~a 150 (434)
T PF05577_consen 107 YNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQA 150 (434)
T ss_dssp TTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CCH
T ss_pred hcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceeee
Confidence 248999999999999999999999999999998887654
No 180
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.37 E-value=2.1e-06 Score=54.38 Aligned_cols=59 Identities=19% Similarity=0.306 Sum_probs=52.4
Q ss_pred ccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 212 HDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 212 ~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
.|+|++.++.|+.+|.+.++.+.+.+ ++.+++.+++.||........-+.+.+.+||..
T Consensus 35 ~piL~l~~~~Dp~TP~~~a~~~~~~l-~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 35 PPILVLGGTHDPVTPYEGARAMAARL-PGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCEEEEecCcCCCCcHHHHHHHHHHC-CCceEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 49999999999999999999999999 889999999999987755556788888898863
No 181
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.36 E-value=0.00013 Score=54.95 Aligned_cols=100 Identities=15% Similarity=0.202 Sum_probs=60.9
Q ss_pred CCCeEEEEcCCCCchh-HhHHHHHHhhcC--CCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHH---hCCccEEEE
Q 024042 53 KKPSLVLIHGFGPEAI-WQWRKQVQFFAP--HFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEK---IGVERFSVV 126 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~-~~~~~~~~~l~~--~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~l~ 126 (273)
...++|+.||.|.+.. .....+.+.+.. +..+.++.. |.+....-.....++++.+-+.+.. +. +-++++
T Consensus 24 ~~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~~~s~~~~~~~Qve~vce~l~~~~~l~-~G~naI 99 (314)
T PLN02633 24 VSVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGVGDSWLMPLTQQAEIACEKVKQMKELS-QGYNIV 99 (314)
T ss_pred CCCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCccccceeCHHHHHHHHHHHHhhchhhh-CcEEEE
Confidence 4568999999986651 233344444422 244444443 2221111112444454444443333 32 459999
Q ss_pred EeccchHHHHHHHHhCCc--ccceEEEecCCC
Q 024042 127 GTSYGGFVAYHMARMWPE--RVEKVVIASSGV 156 (273)
Q Consensus 127 G~S~Gg~~a~~~a~~~~~--~v~~~v~~~~~~ 156 (273)
|+|.||.++-.++.+.++ .|+.+|.++++-
T Consensus 100 GfSQGGlflRa~ierc~~~p~V~nlISlggph 131 (314)
T PLN02633 100 GRSQGNLVARGLIEFCDGGPPVYNYISLAGPH 131 (314)
T ss_pred EEccchHHHHHHHHHCCCCCCcceEEEecCCC
Confidence 999999999999999876 599999988653
No 182
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.34 E-value=6.1e-06 Score=65.32 Aligned_cols=121 Identities=17% Similarity=0.176 Sum_probs=74.3
Q ss_pred cCCcceEEeecCCccCCCCCCCCCeEEEEcCCC---CchhHhHHHHHHhhc-CC-CeEEeecCCC--CCC--------CC
Q 024042 32 IDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFG---PEAIWQWRKQVQFFA-PH-FNVYVPDLIF--FGH--------ST 96 (273)
Q Consensus 32 ~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~---~~~~~~~~~~~~~l~-~~-~~v~~~d~~g--~g~--------s~ 96 (273)
.+|...|..|... ....+.|++|+|||.+ ++....+-. ...|+ ++ +.|+++++|- .|. ..
T Consensus 76 sEDCL~LNIwaP~----~~a~~~PVmV~IHGG~y~~Gs~s~~~yd-gs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~ 150 (491)
T COG2272 76 SEDCLYLNIWAPE----VPAEKLPVMVYIHGGGYIMGSGSEPLYD-GSALAARGDVVVVSVNYRLGALGFLDLSSLDTED 150 (491)
T ss_pred cccceeEEeeccC----CCCCCCcEEEEEeccccccCCCcccccC-hHHHHhcCCEEEEEeCcccccceeeehhhccccc
Confidence 3467777777763 2456689999999954 222121111 23343 34 8899999982 111 11
Q ss_pred CCCccccHHH---HHHHHHHHHHHhCC--ccEEEEEeccchHHHHHHHHhC--CcccceEEEecCCCC
Q 024042 97 TRSIQRTELF---QAASLGKLLEKIGV--ERFSVVGTSYGGFVAYHMARMW--PERVEKVVIASSGVN 157 (273)
Q Consensus 97 ~~~~~~~~~~---~~~~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~--~~~v~~~v~~~~~~~ 157 (273)
.........+ ..+++.+.|+++|. ++|.|+|+|.||+.++.+.+.- ...++++|+.++...
T Consensus 151 ~~~~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 151 AFASNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred cccccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 1111123333 45667777777755 6799999999998887776541 234777788877665
No 183
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=98.31 E-value=6.6e-05 Score=58.50 Aligned_cols=36 Identities=28% Similarity=0.264 Sum_probs=31.2
Q ss_pred cEEEEEeccchHHHHHHHHhCCcccceEEEecCCCC
Q 024042 122 RFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVN 157 (273)
Q Consensus 122 ~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~ 157 (273)
|++++|+|.||.+|...|.-.|..+++++=-+++..
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~ 220 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYAL 220 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCcccc
Confidence 899999999999999999999998888876665544
No 184
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.25 E-value=7.1e-06 Score=68.67 Aligned_cols=124 Identities=15% Similarity=0.069 Sum_probs=65.9
Q ss_pred cCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch----hHhHHHHHHhhcCCCeEEeecCC----CCCCCCCC--C-c
Q 024042 32 IDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA----IWQWRKQVQFFAPHFNVYVPDLI----FFGHSTTR--S-I 100 (273)
Q Consensus 32 ~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~----~~~~~~~~~~l~~~~~v~~~d~~----g~g~s~~~--~-~ 100 (273)
.+|-..|..+... ......+.|++|++||.+... ...+....-...+..-|+.++|| |+-.+... . .
T Consensus 105 sEDCL~LnI~~P~--~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~g 182 (535)
T PF00135_consen 105 SEDCLYLNIYTPS--NASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSG 182 (535)
T ss_dssp ES---EEEEEEET--SSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBS
T ss_pred CchHHHHhhhhcc--ccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCch
Confidence 4466777777753 112222579999999954221 02222222222344999999999 33222211 1 3
Q ss_pred cccHHHHHH---HHHHHHHHhCC--ccEEEEEeccchHHHHHHHHhC--CcccceEEEecCCCC
Q 024042 101 QRTELFQAA---SLGKLLEKIGV--ERFSVVGTSYGGFVAYHMARMW--PERVEKVVIASSGVN 157 (273)
Q Consensus 101 ~~~~~~~~~---~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~--~~~v~~~v~~~~~~~ 157 (273)
...+.++.. ++.+.|..+|. ++|.|+|+|.||..+..++... ...++++|+.++...
T Consensus 183 N~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 183 NYGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSAL 246 (535)
T ss_dssp THHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TT
T ss_pred hhhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccccc
Confidence 445555544 44444555544 7899999999998887766552 346999999888543
No 185
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=98.24 E-value=0.00041 Score=51.37 Aligned_cols=109 Identities=9% Similarity=0.074 Sum_probs=79.7
Q ss_pred CCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEeccc
Q 024042 52 LKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYG 131 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~G 131 (273)
...|.|+++-...++.....+...+.|-....|+..|+-....-.-.....+.+++.+-+.+.++.+|.+ +++++.|.-
T Consensus 101 ~pdPkvLivapmsGH~aTLLR~TV~alLp~~~vyitDW~dAr~Vp~~~G~FdldDYIdyvie~~~~~Gp~-~hv~aVCQP 179 (415)
T COG4553 101 KPDPKVLIVAPMSGHYATLLRGTVEALLPYHDVYITDWVDARMVPLEAGHFDLDDYIDYVIEMINFLGPD-AHVMAVCQP 179 (415)
T ss_pred CCCCeEEEEecccccHHHHHHHHHHHhccccceeEeeccccceeecccCCccHHHHHHHHHHHHHHhCCC-CcEEEEecC
Confidence 3456777777766666467777888888888999999875444444455679999999999999999965 888888877
Q ss_pred hHHH-----HHHHHhCCcccceEEEecCCCCCCCc
Q 024042 132 GFVA-----YHMARMWPERVEKVVIASSGVNMKRG 161 (273)
Q Consensus 132 g~~a-----~~~a~~~~~~v~~~v~~~~~~~~~~~ 161 (273)
+.-. ++.+...|.....+++++++.+....
T Consensus 180 ~vPvLAAisLM~~~~~p~~PssMtlmGgPIDaR~n 214 (415)
T COG4553 180 TVPVLAAISLMEEDGDPNVPSSMTLMGGPIDARKN 214 (415)
T ss_pred CchHHHHHHHHHhcCCCCCCceeeeecCccccccC
Confidence 6433 33334457778899999988765543
No 186
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=98.24 E-value=4.9e-05 Score=60.53 Aligned_cols=104 Identities=15% Similarity=0.048 Sum_probs=63.8
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHHHh-------------------hcCCCeEEeecCC-CCCCCCC--CCccccHHHHH
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQVQF-------------------FAPHFNVYVPDLI-FFGHSTT--RSIQRTELFQA 108 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~~~-------------------l~~~~~v~~~d~~-g~g~s~~--~~~~~~~~~~~ 108 (273)
..++|.++++-|.++++ ..+..+.+. +...-.++.+|+| |.|.|.. .....+.....
T Consensus 98 p~~rPvi~wlNGGPGcS-S~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~ 176 (498)
T COG2939 98 PANRPVIFWLNGGPGCS-SVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAG 176 (498)
T ss_pred CCCCceEEEecCCCChH-hhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccc
Confidence 45689999999999988 666555321 1112468899955 8888874 22222333333
Q ss_pred HHHHHHHH-------HhCC--ccEEEEEeccchHHHHHHHHhCCc---ccceEEEecCC
Q 024042 109 ASLGKLLE-------KIGV--ERFSVVGTSYGGFVAYHMARMWPE---RVEKVVIASSG 155 (273)
Q Consensus 109 ~~~~~~~~-------~~~~--~~i~l~G~S~Gg~~a~~~a~~~~~---~v~~~v~~~~~ 155 (273)
+|+..+.+ +... .+.+|+|.|+||+-+..+|...-+ ..++++.+.+.
T Consensus 177 ~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssv 235 (498)
T COG2939 177 KDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSV 235 (498)
T ss_pred hhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeee
Confidence 44433333 3332 589999999999988777765433 24555555443
No 187
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=98.21 E-value=4.8e-05 Score=56.64 Aligned_cols=108 Identities=21% Similarity=0.119 Sum_probs=61.3
Q ss_pred CCCCCCeEEEEcCCC--CchhHhHHHHHHhhcCC----CeEEeecCCCC---CCCCCCCccccHHHHHHHHHHHHHHh--
Q 024042 50 KTLKKPSLVLIHGFG--PEAIWQWRKQVQFFAPH----FNVYVPDLIFF---GHSTTRSIQRTELFQAASLGKLLEKI-- 118 (273)
Q Consensus 50 ~~~~~~~vi~~hG~~--~~~~~~~~~~~~~l~~~----~~v~~~d~~g~---g~s~~~~~~~~~~~~~~~~~~~~~~~-- 118 (273)
...+.|++++.||-. .+. ..++.+-..+.++ -.++.+|+-.- ..... .........++.+.=.++..
T Consensus 94 ~~~k~pvl~~~DG~~~~~~g-~i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~-~n~~~~~~L~~eLlP~v~~~yp 171 (299)
T COG2382 94 PLEKYPVLYLQDGQDWFRSG-RIPRILDSLIAAGEIPPAILVGIDYIDVKKRREELH-CNEAYWRFLAQELLPYVEERYP 171 (299)
T ss_pred ccccccEEEEeccHHHHhcC-ChHHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhc-ccHHHHHHHHHHhhhhhhccCc
Confidence 356789999999832 222 2333333333333 44555554310 00000 00112222233333333322
Q ss_pred ---CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCC
Q 024042 119 ---GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMK 159 (273)
Q Consensus 119 ---~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~ 159 (273)
....-+|.|.|+||.+++..+..+|+++..++.-+|.....
T Consensus 172 ~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~~ 215 (299)
T COG2382 172 TSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWWT 215 (299)
T ss_pred ccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccccC
Confidence 12456899999999999999999999999999888866543
No 188
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=98.20 E-value=1.5e-05 Score=61.62 Aligned_cols=105 Identities=18% Similarity=0.295 Sum_probs=80.2
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCcc---ccHHHHHHHHHHHHHHhCC---ccEE
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQ---RTELFQAASLGKLLEKIGV---ERFS 124 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~---~~~~~~~~~~~~~~~~~~~---~~i~ 124 (273)
+.+.|+|++.-|++.+...........| +-+-+.+++|-++.|.+.+.+ .++++.+.|...+++.+.. ++.+
T Consensus 60 ~~drPtV~~T~GY~~~~~p~r~Ept~Ll--d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~kWI 137 (448)
T PF05576_consen 60 DFDRPTVLYTEGYNVSTSPRRSEPTQLL--DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPGKWI 137 (448)
T ss_pred CCCCCeEEEecCcccccCccccchhHhh--ccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccCCce
Confidence 3467889998898765412223333444 256788999999999877665 3888888998888887732 7788
Q ss_pred EEEeccchHHHHHHHHhCCcccceEEEecCCCC
Q 024042 125 VVGTSYGGFVAYHMARMWPERVEKVVIASSGVN 157 (273)
Q Consensus 125 l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~ 157 (273)
--|-|-||+.++.+=.-+|+.+++.|...++.+
T Consensus 138 STG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~~ 170 (448)
T PF05576_consen 138 STGGSKGGMTAVYYRRFYPDDVDGTVAYVAPND 170 (448)
T ss_pred ecCcCCCceeEEEEeeeCCCCCCeeeeeecccc
Confidence 899999999999999999999999998776654
No 189
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=98.02 E-value=3e-05 Score=59.71 Aligned_cols=86 Identities=22% Similarity=0.171 Sum_probs=62.8
Q ss_pred CCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHh----CCccEEEEE
Q 024042 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKI----GVERFSVVG 127 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~l~G 127 (273)
....-||+.|-|+-. ..-+.+...|.+. +.|+.+|---|-.|. .+.+..+.|+..+++.+ +.+++.|+|
T Consensus 259 sd~~av~~SGDGGWr-~lDk~v~~~l~~~gvpVvGvdsLRYfW~~-----rtPe~~a~Dl~r~i~~y~~~w~~~~~~liG 332 (456)
T COG3946 259 SDTVAVFYSGDGGWR-DLDKEVAEALQKQGVPVVGVDSLRYFWSE-----RTPEQIAADLSRLIRFYARRWGAKRVLLIG 332 (456)
T ss_pred cceEEEEEecCCchh-hhhHHHHHHHHHCCCceeeeehhhhhhcc-----CCHHHHHHHHHHHHHHHHHhhCcceEEEEe
Confidence 445667888877666 6667788889887 999999955443333 35666777777777655 668999999
Q ss_pred eccchHHHHHHHHhCCc
Q 024042 128 TSYGGFVAYHMARMWPE 144 (273)
Q Consensus 128 ~S~Gg~~a~~~a~~~~~ 144 (273)
+|+|+-+.-..-.+.|.
T Consensus 333 ySfGADvlP~~~n~L~~ 349 (456)
T COG3946 333 YSFGADVLPFAYNRLPP 349 (456)
T ss_pred ecccchhhHHHHHhCCH
Confidence 99999877666666554
No 190
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.02 E-value=5.6e-05 Score=60.26 Aligned_cols=82 Identities=15% Similarity=0.177 Sum_probs=55.1
Q ss_pred hHHHHHHhhcCC-C------eEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHh---CCccEEEEEeccchHHHHHHH
Q 024042 70 QWRKQVQFFAPH-F------NVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKI---GVERFSVVGTSYGGFVAYHMA 139 (273)
Q Consensus 70 ~~~~~~~~l~~~-~------~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~a 139 (273)
.|..+++.|.+. | ...-+|+|- ... ..+.....+...++.. ..++++|+||||||.++..+.
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~-------~~~-~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl 137 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRL-------SPA-ERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFL 137 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhh-------chh-hHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHH
Confidence 688888888663 3 223368772 111 2334444455555433 358999999999999999988
Q ss_pred HhCCc------ccceEEEecCCCCCC
Q 024042 140 RMWPE------RVEKVVIASSGVNMK 159 (273)
Q Consensus 140 ~~~~~------~v~~~v~~~~~~~~~ 159 (273)
...+. .|+++|.++++....
T Consensus 138 ~~~~~~~W~~~~i~~~i~i~~p~~Gs 163 (389)
T PF02450_consen 138 QWMPQEEWKDKYIKRFISIGTPFGGS 163 (389)
T ss_pred HhccchhhHHhhhhEEEEeCCCCCCC
Confidence 87642 499999999876544
No 191
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=98.01 E-value=0.0018 Score=50.29 Aligned_cols=58 Identities=19% Similarity=0.293 Sum_probs=47.4
Q ss_pred cEEEEecCCCCCCChHHHHHHHHHhc-----------------------CC-cEEEEeCCCCCCcCcCChhhHHHHHHHH
Q 024042 213 DVLIVWGDQDQIFPLKMATELKELLG-----------------------KK-ARLEIIENTSHVPQIENPGLFNSIVKNF 268 (273)
Q Consensus 213 p~l~i~g~~D~~~~~~~~~~~~~~~~-----------------------~~-~~~~~~~~~gH~~~~~~~~~~~~~i~~f 268 (273)
++|+..|+.|.+|+.-..+.+.+.+. .+ .++..+.++||+.. .+|+...+.+.+|
T Consensus 235 ~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~~f 313 (319)
T PLN02213 235 RSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQRW 313 (319)
T ss_pred eEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHHHH
Confidence 99999999999999887777777651 11 45666778999986 5899999999999
Q ss_pred hcc
Q 024042 269 LRG 271 (273)
Q Consensus 269 l~~ 271 (273)
++.
T Consensus 314 i~~ 316 (319)
T PLN02213 314 ISG 316 (319)
T ss_pred HcC
Confidence 975
No 192
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.97 E-value=0.00063 Score=50.10 Aligned_cols=40 Identities=20% Similarity=0.367 Sum_probs=35.1
Q ss_pred CCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCC
Q 024042 119 GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNM 158 (273)
Q Consensus 119 ~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~ 158 (273)
+.++..++|||+||.+++.....+|+.+...++++|..-.
T Consensus 135 ~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlWw 174 (264)
T COG2819 135 NSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLWW 174 (264)
T ss_pred CcccceeeeecchhHHHHHHHhcCcchhceeeeecchhhh
Confidence 4467899999999999999999999999999999985543
No 193
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.88 E-value=5.2e-05 Score=56.36 Aligned_cols=103 Identities=15% Similarity=0.107 Sum_probs=51.8
Q ss_pred CCCeEEEEcCCCCchh--HhHH---HHHHhhcCCCeEEeecCCCCCCCCC-CCc-cccHHHHHHHHHHHHHHhCC--ccE
Q 024042 53 KKPSLVLIHGFGPEAI--WQWR---KQVQFFAPHFNVYVPDLIFFGHSTT-RSI-QRTELFQAASLGKLLEKIGV--ERF 123 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~--~~~~---~~~~~l~~~~~v~~~d~~g~g~s~~-~~~-~~~~~~~~~~~~~~~~~~~~--~~i 123 (273)
+..+||+.||+|.+.. ..+. .+++..-.+.-|.+++.- -+.+.. ... ...+.++++.+-+.++.... +-+
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig-~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~G~ 82 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIG-NDPSEDVENSFFGNVNDQVEQVCEQLANDPELANGF 82 (279)
T ss_dssp SS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SS-SSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGTT-E
T ss_pred CCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEEC-CCcchhhhhhHHHHHHHHHHHHHHHHhhChhhhcce
Confidence 4568999999986531 2333 344444445556666652 111100 000 12344455555555544321 569
Q ss_pred EEEEeccchHHHHHHHHhCCc-ccceEEEecCCC
Q 024042 124 SVVGTSYGGFVAYHMARMWPE-RVEKVVIASSGV 156 (273)
Q Consensus 124 ~l~G~S~Gg~~a~~~a~~~~~-~v~~~v~~~~~~ 156 (273)
+++|+|.||.++-.++.+.++ .|+.+|.++++-
T Consensus 83 ~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph 116 (279)
T PF02089_consen 83 NAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPH 116 (279)
T ss_dssp EEEEETCHHHHHHHHHHH-TSS-EEEEEEES--T
T ss_pred eeeeeccccHHHHHHHHHCCCCCceeEEEecCcc
Confidence 999999999999999999764 599999988653
No 194
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.84 E-value=0.003 Score=46.13 Aligned_cols=96 Identities=16% Similarity=0.174 Sum_probs=56.2
Q ss_pred CCCeEEEEcC--CCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHh----CC----c
Q 024042 53 KKPSLVLIHG--FGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKI----GV----E 121 (273)
Q Consensus 53 ~~~~vi~~hG--~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~----~~----~ 121 (273)
+..+|=|+-| +|....-.|+.+.+.|++. |.|++.-+.- + ........+..+.....++.+ +. -
T Consensus 16 P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-t----fDH~~~A~~~~~~f~~~~~~L~~~~~~~~~~l 90 (250)
T PF07082_consen 16 PKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-T----FDHQAIAREVWERFERCLRALQKRGGLDPAYL 90 (250)
T ss_pred CCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-C----CcHHHHHHHHHHHHHHHHHHHHHhcCCCcccC
Confidence 3445556666 3344446789999999887 9999987751 1 000011111111112222221 21 3
Q ss_pred cEEEEEeccchHHHHHHHHhCCcccceEEEec
Q 024042 122 RFSVVGTSYGGFVAYHMARMWPERVEKVVIAS 153 (273)
Q Consensus 122 ~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~ 153 (273)
+++-+|||+|+-+-+.+...++..-++-++++
T Consensus 91 P~~~vGHSlGcklhlLi~s~~~~~r~gniliS 122 (250)
T PF07082_consen 91 PVYGVGHSLGCKLHLLIGSLFDVERAGNILIS 122 (250)
T ss_pred CeeeeecccchHHHHHHhhhccCcccceEEEe
Confidence 67789999999998888877765556666665
No 195
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=97.83 E-value=0.001 Score=54.44 Aligned_cols=84 Identities=15% Similarity=0.143 Sum_probs=58.8
Q ss_pred HHHhhcCCCeEEeecCCCCCCCCC--CC-ccc-----------cHHHHHHHHHHHHHHh---CCccEEEEEeccchHHHH
Q 024042 74 QVQFFAPHFNVYVPDLIFFGHSTT--RS-IQR-----------TELFQAASLGKLLEKI---GVERFSVVGTSYGGFVAY 136 (273)
Q Consensus 74 ~~~~l~~~~~v~~~d~~g~g~s~~--~~-~~~-----------~~~~~~~~~~~~~~~~---~~~~i~l~G~S~Gg~~a~ 136 (273)
+...++++|.++.-|- ||..+.. .. ... .+...+..-.++++.+ ..+.-...|.|-||.-++
T Consensus 52 ~~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl 130 (474)
T PF07519_consen 52 MATALARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGL 130 (474)
T ss_pred cchhhhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHH
Confidence 5667778899999986 6665543 11 111 1222223334444444 346788999999999999
Q ss_pred HHHHhCCcccceEEEecCCCCC
Q 024042 137 HMARMWPERVEKVVIASSGVNM 158 (273)
Q Consensus 137 ~~a~~~~~~v~~~v~~~~~~~~ 158 (273)
..|+++|+.+++++.-+|....
T Consensus 131 ~~AQryP~dfDGIlAgaPA~~~ 152 (474)
T PF07519_consen 131 MAAQRYPEDFDGILAGAPAINW 152 (474)
T ss_pred HHHHhChhhcCeEEeCCchHHH
Confidence 9999999999999999987654
No 196
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=97.79 E-value=0.0053 Score=49.17 Aligned_cols=118 Identities=15% Similarity=0.168 Sum_probs=74.6
Q ss_pred EecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHH--HHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHH
Q 024042 30 IDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWR--KQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQ 107 (273)
Q Consensus 30 ~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~--~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~ 107 (273)
+..+.+..+.|+.. +++-+.|..|++.|+-. . +.++ .+++.|.. --.+.-|.|--|.+-......-....
T Consensus 270 ~~D~~reEi~yYFn-----PGD~KPPL~VYFSGyR~-a-EGFEgy~MMk~Lg~-PfLL~~DpRleGGaFYlGs~eyE~~I 341 (511)
T TIGR03712 270 LVDSKRQEFIYYFN-----PGDFKPPLNVYFSGYRP-A-EGFEGYFMMKRLGA-PFLLIGDPRLEGGAFYLGSDEYEQGI 341 (511)
T ss_pred EecCCCCeeEEecC-----CcCCCCCeEEeeccCcc-c-CcchhHHHHHhcCC-CeEEeeccccccceeeeCcHHHHHHH
Confidence 33345666666665 33667788899999765 2 3333 23444432 23445577766665433322234445
Q ss_pred HHHHHHHHHHhCC--ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCC
Q 024042 108 AASLGKLLEKIGV--ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVN 157 (273)
Q Consensus 108 ~~~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~ 157 (273)
.+.|.+.++.++. +.++|-|-|||..-|+.++++.. ..++|+--|-..
T Consensus 342 ~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKPL~N 391 (511)
T TIGR03712 342 INVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKPLVN 391 (511)
T ss_pred HHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCC--CceEEEcCcccc
Confidence 6667777788876 56999999999999999999863 566666555443
No 197
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.78 E-value=0.00021 Score=52.14 Aligned_cols=97 Identities=18% Similarity=0.228 Sum_probs=61.3
Q ss_pred CeEEEEcCCCCchhHh--HHHHHHhhcCC--CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhC--CccEEEEEe
Q 024042 55 PSLVLIHGFGPEAIWQ--WRKQVQFFAPH--FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIG--VERFSVVGT 128 (273)
Q Consensus 55 ~~vi~~hG~~~~~~~~--~~~~~~~l~~~--~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~l~G~ 128 (273)
.++|++||++.+. .. ...+.+.+.+. ..|+++|. |-| ..........++++.+.+.+.... .+-+.++|.
T Consensus 24 ~P~ii~HGigd~c-~~~~~~~~~q~l~~~~g~~v~~lei-g~g--~~~s~l~pl~~Qv~~~ce~v~~m~~lsqGynivg~ 99 (296)
T KOG2541|consen 24 VPVIVWHGIGDSC-SSLSMANLTQLLEELPGSPVYCLEI-GDG--IKDSSLMPLWEQVDVACEKVKQMPELSQGYNIVGY 99 (296)
T ss_pred CCEEEEeccCccc-ccchHHHHHHHHHhCCCCeeEEEEe-cCC--cchhhhccHHHHHHHHHHHHhcchhccCceEEEEE
Confidence 6799999998776 33 55666665553 77888876 334 111111234444444444333221 256899999
Q ss_pred ccchHHHHHHHHhCCc-ccceEEEecCC
Q 024042 129 SYGGFVAYHMARMWPE-RVEKVVIASSG 155 (273)
Q Consensus 129 S~Gg~~a~~~a~~~~~-~v~~~v~~~~~ 155 (273)
|.||.++-.++..-++ .++..|.++++
T Consensus 100 SQGglv~Raliq~cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 100 SQGGLVARALIQFCDNPPVKNFISLGGP 127 (296)
T ss_pred ccccHHHHHHHHhCCCCCcceeEeccCC
Confidence 9999999998887543 47888877764
No 198
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.76 E-value=0.0011 Score=46.69 Aligned_cols=136 Identities=24% Similarity=0.289 Sum_probs=75.8
Q ss_pred hhCCCceeEEecCCcc---eEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHH----------------HHHhhcCC
Q 024042 21 ASAGLSSQTIDIDDET---TLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRK----------------QVQFFAPH 81 (273)
Q Consensus 21 ~~~~~~~~~~~~~~g~---~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~----------------~~~~l~~~ 81 (273)
..+++....+.+ |+. ...+....+ + .-..+...+|++||.|--....|.+ +-+..+.+
T Consensus 68 k~c~Lkr~~ip~-d~~e~E~~SFiF~s~-~-~lt~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~G 144 (297)
T KOG3967|consen 68 KDCNLKRVSIPV-DATESEPKSFIFMSE-D-ALTNPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEG 144 (297)
T ss_pred hcCCceeEeecC-CCCCCCCcceEEECh-h-HhcCccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcC
Confidence 456678888887 442 222222210 0 1134456899999987544344532 12344556
Q ss_pred CeEEeecCCC---CCCCCCCCcc--ccHHHHHHHH-HHHHHHhCCccEEEEEeccchHHHHHHHHhCCc--ccceEEEec
Q 024042 82 FNVYVPDLIF---FGHSTTRSIQ--RTELFQAASL-GKLLEKIGVERFSVVGTSYGGFVAYHMARMWPE--RVEKVVIAS 153 (273)
Q Consensus 82 ~~v~~~d~~g---~g~s~~~~~~--~~~~~~~~~~-~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~--~v~~~v~~~ 153 (273)
|.|++.+.-- +-.+...+.. .+..+.+..+ ..++.-...+.+.++.||+||...+.+..++|+ +|-++.+.+
T Consensus 145 ygviv~N~N~~~kfye~k~np~kyirt~veh~~yvw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTD 224 (297)
T KOG3967|consen 145 YGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYVWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTD 224 (297)
T ss_pred CcEEEeCCchhhhhhhcccCcchhccchHHHHHHHHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeec
Confidence 8888887531 1111111111 1222222221 222333355889999999999999999999875 577777766
Q ss_pred CCCCCC
Q 024042 154 SGVNMK 159 (273)
Q Consensus 154 ~~~~~~ 159 (273)
++...+
T Consensus 225 s~~~~p 230 (297)
T KOG3967|consen 225 SAMGSP 230 (297)
T ss_pred ccccCc
Confidence 664433
No 199
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.73 E-value=0.00026 Score=54.97 Aligned_cols=100 Identities=20% Similarity=0.218 Sum_probs=69.2
Q ss_pred CeEEEEcCCCCchhHhHHH---HHHhhcCC--CeEEeecCCCCCCCCCCCcc----------ccHHHHHHHHHHHHHHhC
Q 024042 55 PSLVLIHGFGPEAIWQWRK---QVQFFAPH--FNVYVPDLIFFGHSTTRSIQ----------RTELFQAASLGKLLEKIG 119 (273)
Q Consensus 55 ~~vi~~hG~~~~~~~~~~~---~~~~l~~~--~~v~~~d~~g~g~s~~~~~~----------~~~~~~~~~~~~~~~~~~ 119 (273)
.+|+|.-|.-++- +.+.. ++..++.. --++..+.|-+|+|.+-... .+.++..+|...++..+.
T Consensus 81 gPIffYtGNEGdi-e~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK 159 (492)
T KOG2183|consen 81 GPIFFYTGNEGDI-EWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLK 159 (492)
T ss_pred CceEEEeCCcccH-HHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHh
Confidence 5788888876665 43322 22223332 56788899999998754322 245555666666666552
Q ss_pred ------CccEEEEEeccchHHHHHHHHhCCcccceEEEecCC
Q 024042 120 ------VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSG 155 (273)
Q Consensus 120 ------~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~ 155 (273)
..+|+.+|-|+||++|..+-.+||..+.|....+++
T Consensus 160 ~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAP 201 (492)
T KOG2183|consen 160 RDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAP 201 (492)
T ss_pred hccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCc
Confidence 258999999999999999999999988777665544
No 200
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=97.70 E-value=0.00012 Score=41.30 Aligned_cols=48 Identities=19% Similarity=0.306 Sum_probs=28.0
Q ss_pred CCCceeEEecCCcceEEeecCCccC--CCCCCCCCeEEEEcCCCCchhHhH
Q 024042 23 AGLSSQTIDIDDETTLHFWGPKLED--DHKTLKKPSLVLIHGFGPEAIWQW 71 (273)
Q Consensus 23 ~~~~~~~~~~~~g~~l~~~~~~~~~--~~~~~~~~~vi~~hG~~~~~~~~~ 71 (273)
...+.+.++++||..|..+....+. .....++|+|++.||+.+++ ..|
T Consensus 10 Y~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss-~~w 59 (63)
T PF04083_consen 10 YPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSS-DDW 59 (63)
T ss_dssp ---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--G-GGG
T ss_pred CCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccCh-HHH
Confidence 3468889999999999877765332 22346789999999999888 666
No 201
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.67 E-value=0.00015 Score=49.90 Aligned_cols=40 Identities=20% Similarity=0.067 Sum_probs=30.8
Q ss_pred CCccEEEEEeccchHHHHHHHHhCCc----ccceEEEecCCCCC
Q 024042 119 GVERFSVVGTSYGGFVAYHMARMWPE----RVEKVVIASSGVNM 158 (273)
Q Consensus 119 ~~~~i~l~G~S~Gg~~a~~~a~~~~~----~v~~~v~~~~~~~~ 158 (273)
...+++++|||+||.+|..++..... ....++..+++...
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~ 69 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVG 69 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCccc
Confidence 56889999999999999999887654 45666666665443
No 202
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.44 E-value=0.00035 Score=47.23 Aligned_cols=37 Identities=27% Similarity=0.218 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhC
Q 024042 106 FQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMW 142 (273)
Q Consensus 106 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 142 (273)
...+.+.++.+.....++++.|||+||.+|..++...
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhh
Confidence 3445555555555557899999999999999888763
No 203
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.42 E-value=0.009 Score=41.78 Aligned_cols=106 Identities=22% Similarity=0.172 Sum_probs=62.0
Q ss_pred CCCCCeEEEEcCCCCchhHhH-----------HHHHHhh---cCCCeEEeecCCCCCCCCCC----CccccHHHHHHHHH
Q 024042 51 TLKKPSLVLIHGFGPEAIWQW-----------RKQVQFF---APHFNVYVPDLIFFGHSTTR----SIQRTELFQAASLG 112 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~-----------~~~~~~l---~~~~~v~~~d~~g~g~s~~~----~~~~~~~~~~~~~~ 112 (273)
+....+.++++|.+.+..... +...... ...-.+-++-|-||-.-... ......+.-+..+.
T Consensus 16 d~A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~A~~ga~~L~ 95 (177)
T PF06259_consen 16 DTADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGYARAGAPRLA 95 (177)
T ss_pred CCcCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchHHHHHHHHHH
Confidence 556678999999775441111 1111111 12234444444444322100 11112334455666
Q ss_pred HHHHHhC-----CccEEEEEeccchHHHHHHHHhCCcccceEEEecCCC
Q 024042 113 KLLEKIG-----VERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGV 156 (273)
Q Consensus 113 ~~~~~~~-----~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~ 156 (273)
.+++.+. ..++.++|||+|+.++-.++...+..++.+|+++++.
T Consensus 96 ~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG 144 (177)
T PF06259_consen 96 RFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPG 144 (177)
T ss_pred HHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCC
Confidence 6666552 2479999999999999999888667799999887654
No 204
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=97.39 E-value=0.0019 Score=54.47 Aligned_cols=121 Identities=16% Similarity=0.078 Sum_probs=67.6
Q ss_pred CCcceEEeecCCccCCCCCC-CCCeEEEEcCCCCchh--HhHH--HHHHhhcC-CCeEEeecCC----CCCCCC--CCCc
Q 024042 33 DDETTLHFWGPKLEDDHKTL-KKPSLVLIHGFGPEAI--WQWR--KQVQFFAP-HFNVYVPDLI----FFGHST--TRSI 100 (273)
Q Consensus 33 ~~g~~l~~~~~~~~~~~~~~-~~~~vi~~hG~~~~~~--~~~~--~~~~~l~~-~~~v~~~d~~----g~g~s~--~~~~ 100 (273)
+|...+..+... .... +.|++|++||.+-... ..+. .....+.. ...|+.+.+| |+.... ..+.
T Consensus 94 EDCLylNV~tp~----~~~~~~~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~g 169 (545)
T KOG1516|consen 94 EDCLYLNVYTPQ----GCSESKLPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPG 169 (545)
T ss_pred CCCceEEEeccC----CCccCCCCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCC
Confidence 466677776653 1111 1799999999653220 1221 11122233 3778888888 221111 1133
Q ss_pred cccHHHHHH---HHHHHHHHhC--CccEEEEEeccchHHHHHHHHhC--CcccceEEEecCCCC
Q 024042 101 QRTELFQAA---SLGKLLEKIG--VERFSVVGTSYGGFVAYHMARMW--PERVEKVVIASSGVN 157 (273)
Q Consensus 101 ~~~~~~~~~---~~~~~~~~~~--~~~i~l~G~S~Gg~~a~~~a~~~--~~~v~~~v~~~~~~~ 157 (273)
.....++.. ++..-|...+ .++|.++|||.||..+..+.... ...+..+|..++...
T Consensus 170 N~gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~ 233 (545)
T KOG1516|consen 170 NLGLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNAL 233 (545)
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccccc
Confidence 444545444 4445555554 47899999999999987776531 234666666665543
No 205
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.32 E-value=0.0028 Score=50.73 Aligned_cols=106 Identities=23% Similarity=0.367 Sum_probs=77.0
Q ss_pred CCCCCeEEEEcCCCCch-------hHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCcc-------ccHHHHHHHHHHHHH
Q 024042 51 TLKKPSLVLIHGFGPEA-------IWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQ-------RTELFQAASLGKLLE 116 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~-------~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~-------~~~~~~~~~~~~~~~ 116 (273)
..+.|..++|-|=|... ...|..+++.+ +-.|+.++.|-+|.|.+.... .+......|+..+++
T Consensus 83 ~~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~Akkf--gA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~ 160 (514)
T KOG2182|consen 83 KPGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKF--GATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIK 160 (514)
T ss_pred cCCCceEEEEcCCCCCCCCccccCcchHHHHHHHh--CCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHH
Confidence 45678888888744332 11233333333 278999999999988654332 256677888888888
Q ss_pred HhCC-------ccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCC
Q 024042 117 KIGV-------ERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNM 158 (273)
Q Consensus 117 ~~~~-------~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~ 158 (273)
.++. .+.+.+|-|+-|.++..+-.++|+.+.|.|..++++..
T Consensus 161 ~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~A 209 (514)
T KOG2182|consen 161 AMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVLA 209 (514)
T ss_pred HHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccceeE
Confidence 7632 38999999999999999999999999998888776643
No 206
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.30 E-value=0.0008 Score=49.13 Aligned_cols=49 Identities=29% Similarity=0.226 Sum_probs=35.8
Q ss_pred HHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhC----CcccceEEEecCCCC
Q 024042 108 AASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMW----PERVEKVVIASSGVN 157 (273)
Q Consensus 108 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~----~~~v~~~v~~~~~~~ 157 (273)
.+-+..+++..+ +++.+.|||.||.+|..++... .++|..+...+++..
T Consensus 72 ~~yl~~~~~~~~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf 124 (224)
T PF11187_consen 72 LAYLKKIAKKYP-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGF 124 (224)
T ss_pred HHHHHHHHHhCC-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCC
Confidence 444555555544 4699999999999999999874 357888887776544
No 207
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.21 E-value=0.045 Score=42.65 Aligned_cols=61 Identities=20% Similarity=0.391 Sum_probs=48.5
Q ss_pred ccEEEEecCCCCCCChHHHHHHHHHh---cCCcEEEEeCCCCCCcCc-CChhhHHHHHHHHhccc
Q 024042 212 HDVLIVWGDQDQIFPLKMATELKELL---GKKARLEIIENTSHVPQI-ENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 212 ~p~l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~~ 272 (273)
.+.+.+.+..|.++|.+..+++.+.. +.+++.+-+.++-|..+. ..|....+...+|++..
T Consensus 226 ~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~ 290 (350)
T KOG2521|consen 226 WNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSV 290 (350)
T ss_pred ccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhc
Confidence 37899999999999999999886555 345666667788887655 57899999999998753
No 208
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=97.18 E-value=0.035 Score=49.78 Aligned_cols=97 Identities=14% Similarity=0.194 Sum_probs=68.1
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCC-CCCccccHHHHHHHHHHHHHHhCC-ccEEEEEe
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHST-TRSIQRTELFQAASLGKLLEKIGV-ERFSVVGT 128 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~-~~~~~~~~~~~~~~~~~~~~~~~~-~~i~l~G~ 128 (273)
..+.|+++|+|.+-+.. .....++..|. .|-||... ...+..+++..+.....-++++.. .+..++|+
T Consensus 2120 ~se~~~~Ffv~pIEG~t-t~l~~la~rle---------~PaYglQ~T~~vP~dSies~A~~yirqirkvQP~GPYrl~GY 2189 (2376)
T KOG1202|consen 2120 QSEEPPLFFVHPIEGFT-TALESLASRLE---------IPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQPEGPYRLAGY 2189 (2376)
T ss_pred cccCCceEEEeccccch-HHHHHHHhhcC---------CcchhhhccccCCcchHHHHHHHHHHHHHhcCCCCCeeeecc
Confidence 46789999999988877 66777766553 34444322 223345777777777777777755 78999999
Q ss_pred ccchHHHHHHHHhCC--cccceEEEecCCCC
Q 024042 129 SYGGFVAYHMARMWP--ERVEKVVIASSGVN 157 (273)
Q Consensus 129 S~Gg~~a~~~a~~~~--~~v~~~v~~~~~~~ 157 (273)
|+|+.++..+|.... +....+|++++...
T Consensus 2190 SyG~~l~f~ma~~Lqe~~~~~~lillDGspt 2220 (2376)
T KOG1202|consen 2190 SYGACLAFEMASQLQEQQSPAPLILLDGSPT 2220 (2376)
T ss_pred chhHHHHHHHHHHHHhhcCCCcEEEecCchH
Confidence 999999999887542 33566888876543
No 209
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=97.18 E-value=0.0016 Score=50.02 Aligned_cols=152 Identities=18% Similarity=0.128 Sum_probs=82.4
Q ss_pred HHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCCCCcchHHHhhhhhhhhhhhccCCCChHHHHHHhh
Q 024042 113 KLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNMKRGDNEALVKRANLERIDHLMLPESASQLRTLTG 192 (273)
Q Consensus 113 ~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (273)
..+..+.++.+++-|.|--|..++..|...| ++.++|-...-.-........+....+. .+...+.+...+.+.+...
T Consensus 226 ~eL~q~~Ik~F~VTGaSKRgWttwLTAIaDp-rv~aIvp~v~D~Lni~a~L~hiyrsYGg-nwpi~l~pyyaegi~erl~ 303 (507)
T COG4287 226 DELEQVEIKGFMVTGASKRGWTTWLTAIADP-RVFAIVPFVYDNLNIEAQLLHIYRSYGG-NWPIKLAPYYAEGIDERLE 303 (507)
T ss_pred hhhhheeeeeEEEeccccchHHHHHHHhcCc-chhhhhhhHHhhcccHHHHHHHHHhhCC-CCCcccchhHhhhHHHhhc
Confidence 3444456788999999999999999998877 4777664432111111101111111110 1111111111111111111
Q ss_pred hhhcc-------CCCCChhhHHhhhhccEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHH
Q 024042 193 LAVSK-------NLDIVPDFFFNDFVHDVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIV 265 (273)
Q Consensus 193 ~~~~~-------~~~~~~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i 265 (273)
...+. ...........++..|-.++.++.|.+.+++.+...++.++....+..+||..|... +..+.+.+
T Consensus 304 tp~fkqL~~IiDPlay~~try~~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~---n~~i~esl 380 (507)
T COG4287 304 TPLFKQLLEIIDPLAYRNTRYQLRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLI---NQFIKESL 380 (507)
T ss_pred CHHHHHHHHhhcHHHHhhhhhhhhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhh---HHHHHHHH
Confidence 10000 001111122234555999999999999999999999999955566788899999754 33344444
Q ss_pred HHHh
Q 024042 266 KNFL 269 (273)
Q Consensus 266 ~~fl 269 (273)
..|+
T Consensus 381 ~~fl 384 (507)
T COG4287 381 EPFL 384 (507)
T ss_pred HHHH
Confidence 4444
No 210
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=97.14 E-value=0.001 Score=42.55 Aligned_cols=45 Identities=22% Similarity=0.361 Sum_probs=28.3
Q ss_pred CCceeEEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhHHHH
Q 024042 24 GLSSQTIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQWRKQ 74 (273)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~~~~ 74 (273)
.+.....++ +|..||+.... ....+..+||++|||+++- ..|..+
T Consensus 67 ~~phf~t~I-~g~~iHFih~r----s~~~~aiPLll~HGWPgSf-~Ef~~v 111 (112)
T PF06441_consen 67 SFPHFKTEI-DGLDIHFIHVR----SKRPNAIPLLLLHGWPGSF-LEFLKV 111 (112)
T ss_dssp TS-EEEEEE-TTEEEEEEEE------S-TT-EEEEEE--SS--G-GGGHHH
T ss_pred cCCCeeEEE-eeEEEEEEEee----CCCCCCeEEEEECCCCccH-HhHHhh
Confidence 567777778 89999998876 3456677999999999988 555443
No 211
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.06 E-value=0.0021 Score=52.87 Aligned_cols=85 Identities=14% Similarity=0.120 Sum_probs=51.1
Q ss_pred HhHHHHHHhhcCC-Ce-----EEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHh----CCccEEEEEeccchHHHHHH
Q 024042 69 WQWRKQVQFFAPH-FN-----VYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKI----GVERFSVVGTSYGGFVAYHM 138 (273)
Q Consensus 69 ~~~~~~~~~l~~~-~~-----v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~l~G~S~Gg~~a~~~ 138 (273)
..|..+++.|.+. |. ...+|+|-.. .....-+.+...+...++.. +.++++|+||||||.+++.+
T Consensus 156 ~vw~kLIe~L~~iGY~~~nL~gAPYDWRls~-----~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyF 230 (642)
T PLN02517 156 FVWAVLIANLARIGYEEKNMYMAAYDWRLSF-----QNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHF 230 (642)
T ss_pred eeHHHHHHHHHHcCCCCCceeecccccccCc-----cchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHH
Confidence 3567888887764 54 3344554111 00112233334444444432 35899999999999999987
Q ss_pred HHhCC---------------cccceEEEecCCCCC
Q 024042 139 ARMWP---------------ERVEKVVIASSGVNM 158 (273)
Q Consensus 139 a~~~~---------------~~v~~~v~~~~~~~~ 158 (273)
..... ..|++.|.++++..-
T Consensus 231 L~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 231 MKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred HHhccccccccCCcchHHHHHHHHHheecccccCC
Confidence 76321 237889999886543
No 212
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.01 E-value=0.0014 Score=48.38 Aligned_cols=24 Identities=29% Similarity=0.241 Sum_probs=20.4
Q ss_pred CCccEEEEEeccchHHHHHHHHhC
Q 024042 119 GVERFSVVGTSYGGFVAYHMARMW 142 (273)
Q Consensus 119 ~~~~i~l~G~S~Gg~~a~~~a~~~ 142 (273)
...++++.|||+||.+|..++...
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHHH
Confidence 447899999999999999888753
No 213
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=96.98 E-value=0.0048 Score=50.43 Aligned_cols=105 Identities=16% Similarity=0.116 Sum_probs=60.2
Q ss_pred CCCCeEEEEcCCCCch--hHhHHHHHHhhcC--CCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCC--ccEEE
Q 024042 52 LKKPSLVLIHGFGPEA--IWQWRKQVQFFAP--HFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGV--ERFSV 125 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~--~~~~~~~~~~l~~--~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~l 125 (273)
.++-.|+.+||.|.-. ....+...+.+++ +..|+.+||.-..+...+.........--++..-...+|. ++|++
T Consensus 394 ~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPEaPFPRaleEv~fAYcW~inn~allG~TgEriv~ 473 (880)
T KOG4388|consen 394 RSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPEAPFPRALEEVFFAYCWAINNCALLGSTGERIVL 473 (880)
T ss_pred CCceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCCCCCCcHHHHHHHHHHHHhcCHHHhCcccceEEE
Confidence 3455789999976211 1222222333322 3899999987555444333322222223344444455554 89999
Q ss_pred EEeccchHHHHHHHHh----CCcccceEEEecCCC
Q 024042 126 VGTSYGGFVAYHMARM----WPERVEKVVIASSGV 156 (273)
Q Consensus 126 ~G~S~Gg~~a~~~a~~----~~~~v~~~v~~~~~~ 156 (273)
+|-|.||.+.+-.+.+ .-...+++++.-++.
T Consensus 474 aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~pt 508 (880)
T KOG4388|consen 474 AGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPT 508 (880)
T ss_pred eccCCCcceeehhHHHHHHhCCCCCCceEEecChh
Confidence 9999999876555543 223357888766544
No 214
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=96.83 E-value=0.0059 Score=43.07 Aligned_cols=74 Identities=18% Similarity=0.095 Sum_probs=42.8
Q ss_pred CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHH----hCCccEEEEEeccchHHHHHHHHh------CCcccceEEE
Q 024042 82 FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEK----IGVERFSVVGTSYGGFVAYHMARM------WPERVEKVVI 151 (273)
Q Consensus 82 ~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~l~G~S~Gg~~a~~~a~~------~~~~v~~~v~ 151 (273)
..+..++||-..... .-..+...-+.++...++. -...+++|+|+|.|+.++..++.. ..++|.++++
T Consensus 40 ~~~~~V~YpA~~~~~--~y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvl 117 (179)
T PF01083_consen 40 VAVQGVEYPASLGPN--SYGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVL 117 (179)
T ss_dssp EEEEE--S---SCGG--SCHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEE
T ss_pred eEEEecCCCCCCCcc--cccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEE
Confidence 667777777322111 1112333334444444443 344789999999999999999877 2356889999
Q ss_pred ecCCCC
Q 024042 152 ASSGVN 157 (273)
Q Consensus 152 ~~~~~~ 157 (273)
++-+..
T Consensus 118 fGdP~~ 123 (179)
T PF01083_consen 118 FGDPRR 123 (179)
T ss_dssp ES-TTT
T ss_pred ecCCcc
Confidence 886554
No 215
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=96.82 E-value=0.0036 Score=49.83 Aligned_cols=86 Identities=10% Similarity=0.172 Sum_probs=49.5
Q ss_pred HhHHHHHHhhcCC-Ce------EEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHh
Q 024042 69 WQWRKQVQFFAPH-FN------VYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 69 ~~~~~~~~~l~~~-~~------v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 141 (273)
..|..+++.|..- |. -..+|+|-.-... ...+.........+....+..+.+|++|++|||||.+...+...
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~~~-e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w 202 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRLSYHNS-EERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKW 202 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhhccCCh-hHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhc
Confidence 4677788777543 33 4556776211100 11112223333333333333355999999999999999999988
Q ss_pred CCc--------ccceEEEecCC
Q 024042 142 WPE--------RVEKVVIASSG 155 (273)
Q Consensus 142 ~~~--------~v~~~v~~~~~ 155 (273)
+++ .|++.+-++++
T Consensus 203 ~~~~~~~W~~k~I~sfvnig~p 224 (473)
T KOG2369|consen 203 VEAEGPAWCDKYIKSFVNIGAP 224 (473)
T ss_pred ccccchhHHHHHHHHHHccCch
Confidence 765 25555555543
No 216
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.76 E-value=0.0088 Score=40.84 Aligned_cols=45 Identities=22% Similarity=0.214 Sum_probs=36.6
Q ss_pred HHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCCCCC
Q 024042 114 LLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSGVNM 158 (273)
Q Consensus 114 ~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~ 158 (273)
+++..-..+.++-|.||||..|..+.-++|+...++|.+++..+.
T Consensus 94 v~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYda 138 (227)
T COG4947 94 VIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDA 138 (227)
T ss_pred HHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecceeeH
Confidence 334333456788999999999999999999999999999886653
No 217
>PLN02162 triacylglycerol lipase
Probab=96.69 E-value=0.0059 Score=48.91 Aligned_cols=33 Identities=21% Similarity=0.260 Sum_probs=24.8
Q ss_pred HHHHHHHHHHhCCccEEEEEeccchHHHHHHHH
Q 024042 108 AASLGKLLEKIGVERFSVVGTSYGGFVAYHMAR 140 (273)
Q Consensus 108 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~ 140 (273)
.+.+.+.+.+....++++.|||+||.+|..++.
T Consensus 265 ~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 265 RQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 344555555555568999999999999998765
No 218
>PLN00413 triacylglycerol lipase
Probab=96.68 E-value=0.0062 Score=48.92 Aligned_cols=35 Identities=20% Similarity=0.326 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHH
Q 024042 106 FQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMAR 140 (273)
Q Consensus 106 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~ 140 (273)
...+.+.++++.....++++.|||+||.+|..++.
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 34556667777666678999999999999999875
No 219
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.61 E-value=0.0054 Score=43.83 Aligned_cols=66 Identities=15% Similarity=0.089 Sum_probs=42.6
Q ss_pred hhcCCCeEEeecCCCCCCCCC-----CCc----cccHHHHHHHHHHHHHHhCC-ccEEEEEeccchHHHHHHHHhC
Q 024042 77 FFAPHFNVYVPDLIFFGHSTT-----RSI----QRTELFQAASLGKLLEKIGV-ERFSVVGTSYGGFVAYHMARMW 142 (273)
Q Consensus 77 ~l~~~~~v~~~d~~g~g~s~~-----~~~----~~~~~~~~~~~~~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~ 142 (273)
.+....+|++|-||=...... ... .....+..+....++++.+. ++++|+|||.|+.+..++..++
T Consensus 41 ~F~~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 41 AFNGVCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhhcCCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 454457888888873211111 111 12344455556667777644 6899999999999999998775
No 220
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.51 E-value=0.033 Score=37.66 Aligned_cols=76 Identities=12% Similarity=0.089 Sum_probs=49.9
Q ss_pred eEEEEcCCCCchhHhHHHHHHhhcCCC-eEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEeccchHH
Q 024042 56 SLVLIHGFGPEAIWQWRKQVQFFAPHF-NVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFV 134 (273)
Q Consensus 56 ~vi~~hG~~~~~~~~~~~~~~~l~~~~-~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~ 134 (273)
.||++-|||..+ .....+. +.+++ -++++|++.... +.+.. ..+.+-++.+|||-.+
T Consensus 13 LIvyFaGwgtpp-s~v~HLi--lpeN~dl~lcYDY~dl~l------dfDfs-------------Ay~hirlvAwSMGVwv 70 (214)
T COG2830 13 LIVYFAGWGTPP-SAVNHLI--LPENHDLLLCYDYQDLNL------DFDFS-------------AYRHIRLVAWSMGVWV 70 (214)
T ss_pred EEEEEecCCCCH-HHHhhcc--CCCCCcEEEEeehhhcCc------ccchh-------------hhhhhhhhhhhHHHHH
Confidence 888999998887 5555443 34454 456778763211 11111 1256779999999999
Q ss_pred HHHHHHhCCcccceEEEecCC
Q 024042 135 AYHMARMWPERVEKVVIASSG 155 (273)
Q Consensus 135 a~~~a~~~~~~v~~~v~~~~~ 155 (273)
|-++....+ ++..+.+++.
T Consensus 71 AeR~lqg~~--lksatAiNGT 89 (214)
T COG2830 71 AERVLQGIR--LKSATAINGT 89 (214)
T ss_pred HHHHHhhcc--ccceeeecCC
Confidence 999988764 6666666653
No 221
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=96.49 E-value=0.02 Score=43.38 Aligned_cols=128 Identities=15% Similarity=0.121 Sum_probs=80.8
Q ss_pred EEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCchhHhH---HHHHHh---hc-------CCCeEEeecCC-CCCC
Q 024042 29 TIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEAIWQW---RKQVQF---FA-------PHFNVYVPDLI-FFGH 94 (273)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~~~~~---~~~~~~---l~-------~~~~v~~~d~~-g~g~ 94 (273)
++++.++..+.+|.+-+++. .....|..+.+.|..+.+...+ +.+.+. ++ +.-.++.+|.| |.|.
T Consensus 7 ~v~vr~~a~~F~wly~~~~~-~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~adllfvDnPVGaGf 85 (414)
T KOG1283|consen 7 YVDVRTGAHMFWWLYYATAN-VKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKDADLLFVDNPVGAGF 85 (414)
T ss_pred ceeeecCceEEEEEeeeccc-cccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhhccEEEecCCCcCce
Confidence 45555677777776643322 2256788899998765542333 333221 11 23467788877 7777
Q ss_pred CCCCCcc---ccHHHHHHHHHHHHHHh-------CCccEEEEEeccchHHHHHHHHhCC---------cccceEEEecCC
Q 024042 95 STTRSIQ---RTELFQAASLGKLLEKI-------GVERFSVVGTSYGGFVAYHMARMWP---------ERVEKVVIASSG 155 (273)
Q Consensus 95 s~~~~~~---~~~~~~~~~~~~~~~~~-------~~~~i~l~G~S~Gg~~a~~~a~~~~---------~~v~~~v~~~~~ 155 (273)
|.-.... .+..+.+.|+.++++.+ ...|++|+-.|+||-+|..++...- ..+.++++-+++
T Consensus 86 SyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSW 165 (414)
T KOG1283|consen 86 SYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSW 165 (414)
T ss_pred eeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcc
Confidence 7543322 26677788888888865 3368999999999999988876532 235667776655
Q ss_pred CC
Q 024042 156 VN 157 (273)
Q Consensus 156 ~~ 157 (273)
..
T Consensus 166 IS 167 (414)
T KOG1283|consen 166 IS 167 (414)
T ss_pred cC
Confidence 43
No 222
>PLN02454 triacylglycerol lipase
Probab=96.49 E-value=0.0051 Score=48.72 Aligned_cols=33 Identities=30% Similarity=0.293 Sum_probs=23.6
Q ss_pred HHHHHHHHHhCCc--cEEEEEeccchHHHHHHHHh
Q 024042 109 ASLGKLLEKIGVE--RFSVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 109 ~~~~~~~~~~~~~--~i~l~G~S~Gg~~a~~~a~~ 141 (273)
..+..+++..... +|++.|||+||.+|+.+|..
T Consensus 214 ~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 214 AKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 3344444444333 49999999999999999864
No 223
>PLN02571 triacylglycerol lipase
Probab=96.41 E-value=0.0056 Score=48.54 Aligned_cols=37 Identities=27% Similarity=0.249 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHhCCc--cEEEEEeccchHHHHHHHHh
Q 024042 105 LFQAASLGKLLEKIGVE--RFSVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 105 ~~~~~~~~~~~~~~~~~--~i~l~G~S~Gg~~a~~~a~~ 141 (273)
++..+++..+++..... ++++.|||+||.+|+..|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 34455666666665432 68999999999999998865
No 224
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.27 E-value=0.012 Score=46.15 Aligned_cols=89 Identities=20% Similarity=0.217 Sum_probs=50.7
Q ss_pred CCCCCeEEEEcCCCC-chhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCc---cccHHHHHHHHHHHHHHhCCccEEEE
Q 024042 51 TLKKPSLVLIHGFGP-EAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSI---QRTELFQAASLGKLLEKIGVERFSVV 126 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~-~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~l~ 126 (273)
.+++-.+|+.||+.+ +. ..|...+......+.=..+..+|+-....... ..--...++++.+.+....++++..+
T Consensus 77 ~k~~HLvVlthGi~~~~~-~~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si~kISfv 155 (405)
T KOG4372|consen 77 TKPKHLVVLTHGLHGADM-EYWKEKIEQMTKKMPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSIEKISFV 155 (405)
T ss_pred cCCceEEEeccccccccH-HHHHHHHHhhhcCCCcceEeeeccccchhhccccceeeecccHHHHhhhhhccccceeeee
Confidence 445568999999877 44 66777666665552211223333322211111 11122334445555544557899999
Q ss_pred EeccchHHHHHHHH
Q 024042 127 GTSYGGFVAYHMAR 140 (273)
Q Consensus 127 G~S~Gg~~a~~~a~ 140 (273)
|||+||.++..+..
T Consensus 156 ghSLGGLvar~AIg 169 (405)
T KOG4372|consen 156 GHSLGGLVARYAIG 169 (405)
T ss_pred eeecCCeeeeEEEE
Confidence 99999988765543
No 225
>PLN02408 phospholipase A1
Probab=96.22 E-value=0.0088 Score=46.75 Aligned_cols=35 Identities=23% Similarity=0.296 Sum_probs=25.9
Q ss_pred HHHHHHHHHHhCC--ccEEEEEeccchHHHHHHHHhC
Q 024042 108 AASLGKLLEKIGV--ERFSVVGTSYGGFVAYHMARMW 142 (273)
Q Consensus 108 ~~~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~ 142 (273)
.+.+..+++.... .+|++.|||+||.+|..+|...
T Consensus 185 l~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 185 REEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 4555666665543 3599999999999999988753
No 226
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=96.15 E-value=0.022 Score=44.35 Aligned_cols=41 Identities=34% Similarity=0.419 Sum_probs=32.1
Q ss_pred CCccEEEEEeccchHHHHHHHHhCCcc-----cceEEEecCCCCCC
Q 024042 119 GVERFSVVGTSYGGFVAYHMARMWPER-----VEKVVIASSGVNMK 159 (273)
Q Consensus 119 ~~~~i~l~G~S~Gg~~a~~~a~~~~~~-----v~~~v~~~~~~~~~ 159 (273)
+.+|+.|+|||+|+.+.........++ |+.+++++.+....
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~ 263 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSD 263 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCC
Confidence 557899999999999888777654433 78899998776654
No 227
>PLN02934 triacylglycerol lipase
Probab=96.04 E-value=0.012 Score=47.70 Aligned_cols=35 Identities=29% Similarity=0.377 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHH
Q 024042 106 FQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMAR 140 (273)
Q Consensus 106 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~ 140 (273)
...+.+.++++.....++++.|||+||.+|..++.
T Consensus 306 ~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 34555666666666678999999999999999874
No 228
>PLN02310 triacylglycerol lipase
Probab=95.83 E-value=0.03 Score=44.45 Aligned_cols=36 Identities=22% Similarity=0.199 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHhC----CccEEEEEeccchHHHHHHHHh
Q 024042 106 FQAASLGKLLEKIG----VERFSVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 106 ~~~~~~~~~~~~~~----~~~i~l~G~S~Gg~~a~~~a~~ 141 (273)
+..+.+..+++.+. ..+|.+.|||+||.+|+.+|..
T Consensus 190 qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 190 QVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 34455666665552 1479999999999999988854
No 229
>PLN02324 triacylglycerol lipase
Probab=95.74 E-value=0.018 Score=45.73 Aligned_cols=34 Identities=24% Similarity=0.238 Sum_probs=25.4
Q ss_pred HHHHHHHHHHhCC--ccEEEEEeccchHHHHHHHHh
Q 024042 108 AASLGKLLEKIGV--ERFSVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 108 ~~~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~ 141 (273)
.+.+..+++.... .+|.+.|||+||.+|+..|..
T Consensus 200 l~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 200 QGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 4456666665543 369999999999999998864
No 230
>PLN02802 triacylglycerol lipase
Probab=95.60 E-value=0.022 Score=46.34 Aligned_cols=36 Identities=25% Similarity=0.287 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHhCC--ccEEEEEeccchHHHHHHHHhC
Q 024042 107 QAASLGKLLEKIGV--ERFSVVGTSYGGFVAYHMARMW 142 (273)
Q Consensus 107 ~~~~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~ 142 (273)
..+.+..+++.... .+|++.|||+||.+|..+|...
T Consensus 314 Vl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 314 VVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 34455556655533 3689999999999999888653
No 231
>PLN02753 triacylglycerol lipase
Probab=95.44 E-value=0.026 Score=46.08 Aligned_cols=35 Identities=29% Similarity=0.319 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHhCC-----ccEEEEEeccchHHHHHHHHh
Q 024042 107 QAASLGKLLEKIGV-----ERFSVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 107 ~~~~~~~~~~~~~~-----~~i~l~G~S~Gg~~a~~~a~~ 141 (273)
..+.+..+++.... -+|.+.|||+||.+|+..|..
T Consensus 293 Vl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 293 ILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 34455566655532 479999999999999998853
No 232
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=95.27 E-value=0.082 Score=37.26 Aligned_cols=60 Identities=17% Similarity=0.219 Sum_probs=44.7
Q ss_pred cEEEEecCCCCCCChHHHHHHHHHh---c-CCcEEEEeCCCCCCcCcCC---hhhHHHHHHHHhccc
Q 024042 213 DVLIVWGDQDQIFPLKMATELKELL---G-KKARLEIIENTSHVPQIEN---PGLFNSIVKNFLRGS 272 (273)
Q Consensus 213 p~l~i~g~~D~~~~~~~~~~~~~~~---~-~~~~~~~~~~~gH~~~~~~---~~~~~~~i~~fl~~~ 272 (273)
+++-|-|+.|.++...+.....+.+ + .....++.+++||+..+.- .+++...|.+|+.++
T Consensus 136 aLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 136 ALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred eeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHhC
Confidence 6777999999999887776666555 2 2355667889999865543 368888999998764
No 233
>PLN02719 triacylglycerol lipase
Probab=95.25 E-value=0.032 Score=45.44 Aligned_cols=35 Identities=29% Similarity=0.347 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHhCC-----ccEEEEEeccchHHHHHHHHh
Q 024042 107 QAASLGKLLEKIGV-----ERFSVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 107 ~~~~~~~~~~~~~~-----~~i~l~G~S~Gg~~a~~~a~~ 141 (273)
..+.+..+++.+.. .+|.+.|||+||.+|..+|..
T Consensus 279 Vl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 279 VLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 34445555555432 379999999999999998854
No 234
>PLN02761 lipase class 3 family protein
Probab=95.23 E-value=0.034 Score=45.42 Aligned_cols=35 Identities=29% Similarity=0.275 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHhC-----C-ccEEEEEeccchHHHHHHHHh
Q 024042 107 QAASLGKLLEKIG-----V-ERFSVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 107 ~~~~~~~~~~~~~-----~-~~i~l~G~S~Gg~~a~~~a~~ 141 (273)
..+.+..+++... . -+|.+.|||+||.+|+..|..
T Consensus 274 Vl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 274 VLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 3455566666552 1 369999999999999988853
No 235
>PLN03037 lipase class 3 family protein; Provisional
Probab=95.19 E-value=0.034 Score=45.37 Aligned_cols=35 Identities=20% Similarity=0.244 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHhC----CccEEEEEeccchHHHHHHHHh
Q 024042 107 QAASLGKLLEKIG----VERFSVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 107 ~~~~~~~~~~~~~----~~~i~l~G~S~Gg~~a~~~a~~ 141 (273)
..+++..+++.+. ..++.+.|||+||.+|+..|..
T Consensus 300 Vl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 300 VMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 3456666666553 1369999999999999998854
No 236
>PF03283 PAE: Pectinacetylesterase
Probab=94.74 E-value=0.64 Score=36.99 Aligned_cols=98 Identities=16% Similarity=0.202 Sum_probs=48.7
Q ss_pred CccEEEEEeccchHHHHHHHH----hCCcccceEEEecCCCCCCCcc---hHHHhhhhh-hhhhhhccCCCChHHHHHHh
Q 024042 120 VERFSVVGTSYGGFVAYHMAR----MWPERVEKVVIASSGVNMKRGD---NEALVKRAN-LERIDHLMLPESASQLRTLT 191 (273)
Q Consensus 120 ~~~i~l~G~S~Gg~~a~~~a~----~~~~~v~~~v~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 191 (273)
.++++|.|.|.||.-++..+. ..|..++-..+.+++..+.... ...+..... ...+... ....+.. -
T Consensus 155 a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~----C 229 (361)
T PF03283_consen 155 AKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFFLDNPDYSGNPCIRSFYSDVVGLQNW-SKSLPES----C 229 (361)
T ss_pred cceEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccccccccccCcccchhHHHHHHHHHHHHHh-hccCCHh----H
Confidence 378999999999988877554 3454444444444444432211 111111110 0000000 0000000 0
Q ss_pred hhhhccCCCCChhhHHhhhhccEEEEecCCCC
Q 024042 192 GLAVSKNLDIVPDFFFNDFVHDVLIVWGDQDQ 223 (273)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~p~l~i~g~~D~ 223 (273)
....... -..+...++.+..|++++++.-|.
T Consensus 230 ~~~~~~~-C~f~q~~~~~I~tPlFivns~YD~ 260 (361)
T PF03283_consen 230 VAQYDPE-CFFPQYLYPYIKTPLFIVNSLYDS 260 (361)
T ss_pred HhccCcc-ccchHHHHhhcCcceeeehhhhCH
Confidence 0000011 457778888888899999998883
No 237
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=94.59 E-value=0.061 Score=42.24 Aligned_cols=37 Identities=30% Similarity=0.159 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHh
Q 024042 105 LFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 141 (273)
..+.+++..+++....-++.+-|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 4556677777777776789999999999999998865
No 238
>PLN02847 triacylglycerol lipase
Probab=94.57 E-value=0.069 Score=44.42 Aligned_cols=23 Identities=26% Similarity=0.303 Sum_probs=19.2
Q ss_pred CCccEEEEEeccchHHHHHHHHh
Q 024042 119 GVERFSVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 119 ~~~~i~l~G~S~Gg~~a~~~a~~ 141 (273)
..-+++++|||+||.+|..++..
T Consensus 249 PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 249 PDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CCCeEEEeccChHHHHHHHHHHH
Confidence 33579999999999999888764
No 239
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=94.51 E-value=0.11 Score=38.88 Aligned_cols=41 Identities=22% Similarity=0.263 Sum_probs=29.2
Q ss_pred HHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCC
Q 024042 113 KLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSG 155 (273)
Q Consensus 113 ~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~ 155 (273)
.+.+...-.++.+-|||+||.+|..+..++. +-.+.+-+|+
T Consensus 268 ~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesPG 308 (425)
T KOG4540|consen 268 AVRRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESPG 308 (425)
T ss_pred HHHHhCCCceEEEeccccchHHHHHhccccC--CceEEecCch
Confidence 3334445578999999999999999988874 4455555543
No 240
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=94.51 E-value=0.11 Score=38.88 Aligned_cols=41 Identities=22% Similarity=0.263 Sum_probs=29.2
Q ss_pred HHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCC
Q 024042 113 KLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSG 155 (273)
Q Consensus 113 ~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~ 155 (273)
.+.+...-.++.+-|||+||.+|..+..++. +-.+.+-+|+
T Consensus 268 ~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesPG 308 (425)
T COG5153 268 AVRRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESPG 308 (425)
T ss_pred HHHHhCCCceEEEeccccchHHHHHhccccC--CceEEecCch
Confidence 3334445578999999999999999988874 4455555543
No 241
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=93.92 E-value=0.95 Score=28.43 Aligned_cols=83 Identities=18% Similarity=0.229 Sum_probs=55.4
Q ss_pred HhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccc-cHHHHHHHHHHHHHHhCCccEEEEEeccch--HHHHHHHHhCCc
Q 024042 69 WQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQR-TELFQAASLGKLLEKIGVERFSVVGTSYGG--FVAYHMARMWPE 144 (273)
Q Consensus 69 ~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg--~~a~~~a~~~~~ 144 (273)
..|..+.+.+..+ +..-.+.++..|.+....-.. ..+.-...+..+++.+...+++++|-|--. .+-..++.++|+
T Consensus 11 nly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P~ 90 (100)
T PF09949_consen 11 NLYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFPG 90 (100)
T ss_pred HHHHHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCCC
Confidence 4566666666555 666666666665543222111 113446678888888888999999999665 455567888999
Q ss_pred ccceEEE
Q 024042 145 RVEKVVI 151 (273)
Q Consensus 145 ~v~~~v~ 151 (273)
+|.++.+
T Consensus 91 ~i~ai~I 97 (100)
T PF09949_consen 91 RILAIYI 97 (100)
T ss_pred CEEEEEE
Confidence 9998764
No 242
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.86 E-value=0.14 Score=42.38 Aligned_cols=53 Identities=21% Similarity=0.290 Sum_probs=33.7
Q ss_pred cHHHHHHHHHHHHHHhCC---ccEEEEEeccchHHHHHHHHhC-----Cc------ccceEEEecCC
Q 024042 103 TELFQAASLGKLLEKIGV---ERFSVVGTSYGGFVAYHMARMW-----PE------RVEKVVIASSG 155 (273)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~---~~i~l~G~S~Gg~~a~~~a~~~-----~~------~v~~~v~~~~~ 155 (273)
+.......+.+.+++.+. ++++.+||||||.++=.+...- |+ .-+++++++.+
T Consensus 505 sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~P 571 (697)
T KOG2029|consen 505 SLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVP 571 (697)
T ss_pred HHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecC
Confidence 444444455555555433 6899999999999886665432 22 25677777765
No 243
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=92.87 E-value=0.49 Score=38.54 Aligned_cols=118 Identities=17% Similarity=0.131 Sum_probs=61.3
Q ss_pred CcceEEeecCCccCCCCCCCCCeEEEEcCCCC---ch-hHhHHHHHHhhcCC--CeEEeecCC----C---CCCCCCCCc
Q 024042 34 DETTLHFWGPKLEDDHKTLKKPSLVLIHGFGP---EA-IWQWRKQVQFFAPH--FNVYVPDLI----F---FGHSTTRSI 100 (273)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~---~~-~~~~~~~~~~l~~~--~~v~~~d~~----g---~g~s~~~~~ 100 (273)
|-.-+..|... +...+..++|.+-|.|- +. ...|. .+.|+.. .-|+.+++| | .+.....+.
T Consensus 119 DCLYlNVW~P~----~~p~n~tVlVWiyGGGF~sGt~SLdvYd--Gk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPG 192 (601)
T KOG4389|consen 119 DCLYLNVWAPA----ADPYNLTVLVWIYGGGFYSGTPSLDVYD--GKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPG 192 (601)
T ss_pred hceEEEEeccC----CCCCCceEEEEEEcCccccCCcceeeec--cceeeeeccEEEEEeeeeeccceEEecCCCCCCCC
Confidence 55667777764 22334448888888652 22 12232 2334433 555666666 1 112222222
Q ss_pred cccHHH---HHHHHHHHHHHhCC--ccEEEEEeccchHHHHHHHHh--CCcccceEEEecCCCC
Q 024042 101 QRTELF---QAASLGKLLEKIGV--ERFSVVGTSYGGFVAYHMARM--WPERVEKVVIASSGVN 157 (273)
Q Consensus 101 ~~~~~~---~~~~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~--~~~~v~~~v~~~~~~~ 157 (273)
...+-+ ..+++.+-+..+|. +++.|+|.|.|+.-...-... -...++..|+-++...
T Consensus 193 NmGl~DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~~ 256 (601)
T KOG4389|consen 193 NMGLLDQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSLN 256 (601)
T ss_pred ccchHHHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCCC
Confidence 233333 34566666666654 689999999998644322221 1123566666555444
No 244
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=92.06 E-value=0.9 Score=33.48 Aligned_cols=41 Identities=22% Similarity=0.165 Sum_probs=29.6
Q ss_pred ccHHHHHHHHHHHHHHh--CCccEEEEEeccchHHHHHHHHhC
Q 024042 102 RTELFQAASLGKLLEKI--GVERFSVVGTSYGGFVAYHMARMW 142 (273)
Q Consensus 102 ~~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~ 142 (273)
.+..+-++.+.+.++.. ..++++++|+|.|+.++...+.+.
T Consensus 27 ~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 27 ESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred hHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHH
Confidence 35555556666666552 337899999999999998887664
No 245
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=89.34 E-value=4.6 Score=30.98 Aligned_cols=29 Identities=28% Similarity=0.376 Sum_probs=22.2
Q ss_pred HHHHhCC-ccEEEEEeccchHHHHHHHHhC
Q 024042 114 LLEKIGV-ERFSVVGTSYGGFVAYHMARMW 142 (273)
Q Consensus 114 ~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~ 142 (273)
+.+.+.. ++|.++|+|-|+.+|-.++..-
T Consensus 84 l~~~~~~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 84 LSKNYEPGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred HHhccCCcceEEEEecCccHHHHHHHHHHH
Confidence 3344433 7799999999999999888653
No 246
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=86.72 E-value=12 Score=29.10 Aligned_cols=91 Identities=13% Similarity=0.021 Sum_probs=50.2
Q ss_pred CCCCCeEEEEcCC----CCchhHhHHHHHHhhcCC--CeEEeecCCCCCCCCCCCc----------------cccHHHHH
Q 024042 51 TLKKPSLVLIHGF----GPEAIWQWRKQVQFFAPH--FNVYVPDLIFFGHSTTRSI----------------QRTELFQA 108 (273)
Q Consensus 51 ~~~~~~vi~~hG~----~~~~~~~~~~~~~~l~~~--~~v~~~d~~g~g~s~~~~~----------------~~~~~~~~ 108 (273)
+..+..|+|+-|. +.......-.+...|..+ .+++++=-+|.|.-..... .......+
T Consensus 28 ds~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI 107 (423)
T COG3673 28 DSMKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNI 107 (423)
T ss_pred cCcceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHH
Confidence 4456678888883 222212334455666653 6666666677775421110 01111111
Q ss_pred -HHHHHHHHHhCC-ccEEEEEeccchHHHHHHHHh
Q 024042 109 -ASLGKLLEKIGV-ERFSVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 109 -~~~~~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~ 141 (273)
+...-+++++.. ++|.++|+|-|+.+|-.+|..
T Consensus 108 ~~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 108 REAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 222233344433 789999999999999887764
No 247
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=84.96 E-value=3.7 Score=33.99 Aligned_cols=43 Identities=23% Similarity=0.274 Sum_probs=32.6
Q ss_pred CCccEEEEEeccchHHHHHHHHhC-----CcccceEEEecCCCCCCCc
Q 024042 119 GVERFSVVGTSYGGFVAYHMARMW-----PERVEKVVIASSGVNMKRG 161 (273)
Q Consensus 119 ~~~~i~l~G~S~Gg~~a~~~a~~~-----~~~v~~~v~~~~~~~~~~~ 161 (273)
|.+||.|+|+|.|+-+........ -+.|..+++++++......
T Consensus 445 G~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k~~ 492 (633)
T KOG2385|consen 445 GNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTKAK 492 (633)
T ss_pred CCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCCHH
Confidence 668999999999998887655422 2348889999888776543
No 248
>PRK12467 peptide synthase; Provisional
Probab=84.64 E-value=6.9 Score=42.04 Aligned_cols=98 Identities=12% Similarity=0.025 Sum_probs=64.8
Q ss_pred CCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhC-CccEEEEEeccc
Q 024042 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIG-VERFSVVGTSYG 131 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~G~S~G 131 (273)
..+.+++.|...++. ..+..+...+.....++.+..++.-... ....+....+....+.+.... ..+..+.|+|+|
T Consensus 3691 ~~~~l~~~h~~~r~~-~~~~~l~~~l~~~~~~~~l~~~~~~~d~--~~~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~g 3767 (3956)
T PRK12467 3691 GFPALFCRHEGLGTV-FDYEPLAVILEGDRHVLGLTCRHLLDDG--WQDTSLQAMAVQYADYILWQQAKGPYGLLGWSLG 3767 (3956)
T ss_pred cccceeeechhhcch-hhhHHHHHHhCCCCcEEEEecccccccc--CCccchHHHHHHHHHHHHHhccCCCeeeeeeecc
Confidence 346699999988887 6778888888777788887766542221 122345555555555555543 357899999999
Q ss_pred hHHHHHHHHhC---CcccceEEEec
Q 024042 132 GFVAYHMARMW---PERVEKVVIAS 153 (273)
Q Consensus 132 g~~a~~~a~~~---~~~v~~~v~~~ 153 (273)
|.++..++... .+.+.-+.++.
T Consensus 3768 ~~~a~~~~~~l~~~g~~~~~~~~~~ 3792 (3956)
T PRK12467 3768 GTLARLVAELLEREGESEAFLGLFD 3792 (3956)
T ss_pred hHHHHHHHHHHHHcCCceeEEEEEe
Confidence 99998887642 33455444443
No 249
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=83.93 E-value=11 Score=27.45 Aligned_cols=63 Identities=14% Similarity=0.199 Sum_probs=34.9
Q ss_pred CCCCCeEEEEcCCCCchhHhHHHHHHhhcCC-C-eEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEE
Q 024042 51 TLKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-F-NVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVV 126 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~-~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~ 126 (273)
..+..+|++.||...++...|..+-..+.+. | .|++...-|+. .++.+.+.++.-+.+.+.|+
T Consensus 135 ~k~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~yP-------------~~d~vi~~l~~~~~~~v~L~ 199 (265)
T COG4822 135 NKDEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGYP-------------LVDTVIEYLRKNGIKEVHLI 199 (265)
T ss_pred CcCeEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCCC-------------cHHHHHHHHHHcCCceEEEe
Confidence 3455677777886666545565555555444 5 55554443332 14555566666666655544
No 250
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=83.65 E-value=14 Score=28.27 Aligned_cols=84 Identities=7% Similarity=0.059 Sum_probs=46.7
Q ss_pred HHHhhcCC-CeEEeecCCCCCCCC------CCCccccHHHHHHHHHHHHHHhCC---ccEEEEEeccchHHHHHHHH---
Q 024042 74 QVQFFAPH-FNVYVPDLIFFGHST------TRSIQRTELFQAASLGKLLEKIGV---ERFSVVGTSYGGFVAYHMAR--- 140 (273)
Q Consensus 74 ~~~~l~~~-~~v~~~d~~g~g~s~------~~~~~~~~~~~~~~~~~~~~~~~~---~~i~l~G~S~Gg~~a~~~a~--- 140 (273)
-++++..+ ..++++.|.... |. .......-..+.+.+.+.+..+.. .++++.|.|+|+.-+...-.
T Consensus 53 a~E~l~~GD~A~va~QYSylP-Sw~sfl~dr~~a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~ 131 (289)
T PF10081_consen 53 ALEYLYGGDVAIVAMQYSYLP-SWLSFLVDRDAAREAARALFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLD 131 (289)
T ss_pred HHHHHhCCCeEEEEecccccc-chHHHhcccchHHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHH
Confidence 34555555 888888764211 11 001111222233334444444432 56999999999876655432
Q ss_pred hCCcccceEEEecCCCCC
Q 024042 141 MWPERVEKVVIASSGVNM 158 (273)
Q Consensus 141 ~~~~~v~~~v~~~~~~~~ 158 (273)
..-++++++++.+++...
T Consensus 132 ~~~~~vdGalw~GpP~~s 149 (289)
T PF10081_consen 132 DLRDRVDGALWVGPPFFS 149 (289)
T ss_pred HhhhhcceEEEeCCCCCC
Confidence 233569999999886653
No 251
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=76.31 E-value=2.2 Score=33.37 Aligned_cols=31 Identities=32% Similarity=0.505 Sum_probs=24.2
Q ss_pred HHHHHHHhCCccEEEEEeccchHHHHHHHHh
Q 024042 111 LGKLLEKIGVERFSVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 111 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 141 (273)
+.++++..+.++-.++|||+|=..|+.++..
T Consensus 74 l~~~l~~~Gi~P~~v~GhSlGE~aA~~aaG~ 104 (318)
T PF00698_consen 74 LARLLRSWGIKPDAVIGHSLGEYAALVAAGA 104 (318)
T ss_dssp HHHHHHHTTHCESEEEESTTHHHHHHHHTTS
T ss_pred hhhhhcccccccceeeccchhhHHHHHHCCc
Confidence 4455677788999999999998888766644
No 252
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=76.03 E-value=12 Score=27.08 Aligned_cols=53 Identities=19% Similarity=0.137 Sum_probs=40.5
Q ss_pred CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEecc----chHHHHHHHHhC
Q 024042 82 FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSY----GGFVAYHMARMW 142 (273)
Q Consensus 82 ~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~----Gg~~a~~~a~~~ 142 (273)
-+|+..+-+. ...++.+.+++.+.++++..+ ..++++|+|. |..++-++|.+.
T Consensus 78 d~V~~~~~~~-------~~~~~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarL 134 (202)
T cd01714 78 DRAILVSDRA-------FAGADTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELL 134 (202)
T ss_pred CEEEEEeccc-------ccCCChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHh
Confidence 4677666542 223577888888999888877 5789999998 888999998875
No 253
>COG3933 Transcriptional antiterminator [Transcription]
Probab=75.73 E-value=33 Score=28.23 Aligned_cols=75 Identities=8% Similarity=0.079 Sum_probs=56.3
Q ss_pred CCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEeccc
Q 024042 52 LKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYG 131 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~G 131 (273)
+.-.+||..||.... .+...++..|-..--+.++|+| -+.+..+..+.+.+.+++.+..+=.++=..||
T Consensus 107 ~~v~vIiiAHG~sTA--SSmaevanrLL~~~~~~aiDMP---------Ldvsp~~vle~l~e~~k~~~~~~GlllLVDMG 175 (470)
T COG3933 107 PRVKVIIIAHGYSTA--SSMAEVANRLLGEEIFIAIDMP---------LDVSPSDVLEKLKEYLKERDYRSGLLLLVDMG 175 (470)
T ss_pred CceeEEEEecCcchH--HHHHHHHHHHhhccceeeecCC---------CcCCHHHHHHHHHHHHHhcCccCceEEEEecc
Confidence 445689999996543 4566777777666778899987 34577888889999999888877667778899
Q ss_pred hHHHHH
Q 024042 132 GFVAYH 137 (273)
Q Consensus 132 g~~a~~ 137 (273)
......
T Consensus 176 SL~~f~ 181 (470)
T COG3933 176 SLTSFG 181 (470)
T ss_pred hHHHHH
Confidence 876543
No 254
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=75.33 E-value=4 Score=31.56 Aligned_cols=30 Identities=37% Similarity=0.429 Sum_probs=23.4
Q ss_pred HHHHHHHhCCccEEEEEeccchHHHHHHHH
Q 024042 111 LGKLLEKIGVERFSVVGTSYGGFVAYHMAR 140 (273)
Q Consensus 111 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~ 140 (273)
+.++++..+.++-.++|||+|-..|+.++.
T Consensus 72 ~~~~l~~~Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 72 LARLWRSWGVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHHcCCcccEEEecCHHHHHHHHHhC
Confidence 334556678889999999999988877664
No 255
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=74.79 E-value=5 Score=28.12 Aligned_cols=32 Identities=31% Similarity=0.213 Sum_probs=24.7
Q ss_pred HHHHHHhCCccEEEEEeccchHHHHHHHHhCC
Q 024042 112 GKLLEKIGVERFSVVGTSYGGFVAYHMARMWP 143 (273)
Q Consensus 112 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~ 143 (273)
.+.++..+...-.+.|-|.|+.+|..++...+
T Consensus 17 l~aL~e~gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 17 AKALRERGPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 34444457777789999999999999998653
No 256
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=74.15 E-value=3.1 Score=35.22 Aligned_cols=38 Identities=24% Similarity=0.234 Sum_probs=29.8
Q ss_pred EEEEEeccchHHHHHHHHhCC-cccceEEEecCCCCCCC
Q 024042 123 FSVVGTSYGGFVAYHMARMWP-ERVEKVVIASSGVNMKR 160 (273)
Q Consensus 123 i~l~G~S~Gg~~a~~~a~~~~-~~v~~~v~~~~~~~~~~ 160 (273)
++..+.|-||..++.++.+.. ..|++++...|...+..
T Consensus 287 VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v~~~~ 325 (690)
T PF10605_consen 287 VIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNVNLPP 325 (690)
T ss_pred EEEEeecCccHHHHhHhhcccCCceeeEEecCCccCCCC
Confidence 555689999999999998764 35899999888766553
No 257
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=74.07 E-value=33 Score=27.55 Aligned_cols=87 Identities=20% Similarity=0.230 Sum_probs=56.3
Q ss_pred CCeEEEEcCCCCch------hHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEE
Q 024042 54 KPSLVLIHGFGPEA------IWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVG 127 (273)
Q Consensus 54 ~~~vi~~hG~~~~~------~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G 127 (273)
...||++||...+. .+.|..+++.+.++-.+-.+|.--.|..+ ..++.+..++.+++.. +-.++.
T Consensus 171 ~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~------GleeDa~~lR~~a~~~---~~~lva 241 (396)
T COG1448 171 EGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFAD------GLEEDAYALRLFAEVG---PELLVA 241 (396)
T ss_pred CCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhcc------chHHHHHHHHHHHHhC---CcEEEE
Confidence 45799999854322 37899999988877666666765444332 2455556666655543 227777
Q ss_pred eccchHHHHHHHHhCCcccceEEEecC
Q 024042 128 TSYGGFVAYHMARMWPERVEKVVIASS 154 (273)
Q Consensus 128 ~S~Gg~~a~~~a~~~~~~v~~~v~~~~ 154 (273)
.|..=... .|.+|+.++.+++.
T Consensus 242 ~S~SKnfg-----LYgERVGa~~vva~ 263 (396)
T COG1448 242 SSFSKNFG-----LYGERVGALSVVAE 263 (396)
T ss_pred ehhhhhhh-----hhhhccceeEEEeC
Confidence 77755443 35678888888864
No 258
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=73.93 E-value=5 Score=31.26 Aligned_cols=62 Identities=23% Similarity=0.183 Sum_probs=39.7
Q ss_pred hHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhC
Q 024042 70 QWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMW 142 (273)
Q Consensus 70 ~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 142 (273)
.++++++.|...-..++++ |=|. .. ....-+.+.++..+...-.++|-|+|+.++..++..+
T Consensus 3 d~~rl~r~l~~~~~gLvL~--GGG~-------RG--~ahiGvL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 3 DFSRLARVLTGNSIALVLG--GGGA-------RG--CAHIGVIKALEEAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred hHHHHHHHhcCCCEEEEEC--ChHH-------HH--HHHHHHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 4677788887665455554 2110 01 1222344555666777778999999999999998764
No 259
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=73.67 E-value=5.1 Score=28.64 Aligned_cols=31 Identities=35% Similarity=0.370 Sum_probs=23.6
Q ss_pred HHHHHHhCCccEEEEEeccchHHHHHHHHhC
Q 024042 112 GKLLEKIGVERFSVVGTSYGGFVAYHMARMW 142 (273)
Q Consensus 112 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 142 (273)
.+.++..+...-.++|-|.||.+|..++...
T Consensus 18 l~~L~e~~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 18 LKALEEAGILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHcCCCcceEEEECHHHHHHHHHHcCC
Confidence 3334445666678999999999999999754
No 260
>PRK10279 hypothetical protein; Provisional
Probab=73.22 E-value=4.8 Score=31.25 Aligned_cols=32 Identities=31% Similarity=0.308 Sum_probs=25.5
Q ss_pred HHHHHHHhCCccEEEEEeccchHHHHHHHHhC
Q 024042 111 LGKLLEKIGVERFSVVGTSYGGFVAYHMARMW 142 (273)
Q Consensus 111 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 142 (273)
+.+.++..+...-.++|-|+|+.++..+|...
T Consensus 23 VL~aL~E~gi~~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 23 VINALKKVGIEIDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred HHHHHHHcCCCcCEEEEEcHHHHHHHHHHcCC
Confidence 44555566777789999999999999998754
No 261
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=73.10 E-value=4.7 Score=31.17 Aligned_cols=30 Identities=23% Similarity=0.146 Sum_probs=23.1
Q ss_pred HHHHHHHhCCccEEEEEeccchHHHHHHHH
Q 024042 111 LGKLLEKIGVERFSVVGTSYGGFVAYHMAR 140 (273)
Q Consensus 111 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~ 140 (273)
+.+.++..+.++..++|||+|=..|+.++.
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHHHhC
Confidence 344456668889999999999988877664
No 262
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=71.66 E-value=6.8 Score=28.88 Aligned_cols=30 Identities=30% Similarity=0.329 Sum_probs=22.8
Q ss_pred HHHHHhCCccEEEEEeccchHHHHHHHHhC
Q 024042 113 KLLEKIGVERFSVVGTSYGGFVAYHMARMW 142 (273)
Q Consensus 113 ~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 142 (273)
+.++..+.+.-.++|-|.|+.+|..++...
T Consensus 20 ~aL~e~gi~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 20 AALLEMGLEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHcCCCceEEEEeCHHHHHHHHHHcCC
Confidence 333444666668999999999999998754
No 263
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=69.62 E-value=9.3 Score=25.25 Aligned_cols=19 Identities=21% Similarity=0.358 Sum_probs=15.9
Q ss_pred CCCCCeEEEEcCCCCchhH
Q 024042 51 TLKKPSLVLIHGFGPEAIW 69 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~ 69 (273)
.+++|.|+-+||+.|.+..
T Consensus 49 ~p~KpLVlSfHG~tGtGKn 67 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKN 67 (127)
T ss_pred CCCCCEEEEeecCCCCcHH
Confidence 5688999999999998833
No 264
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=68.72 E-value=6.4 Score=30.27 Aligned_cols=29 Identities=24% Similarity=0.240 Sum_probs=22.2
Q ss_pred HHHHHhC-CccEEEEEeccchHHHHHHHHh
Q 024042 113 KLLEKIG-VERFSVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 113 ~~~~~~~-~~~i~l~G~S~Gg~~a~~~a~~ 141 (273)
..+...+ ..+-.++|||+|=..|+.++..
T Consensus 74 ~~l~~~g~i~p~~v~GhS~GE~aAa~~aG~ 103 (290)
T TIGR00128 74 LKLKEQGGLKPDFAAGHSLGEYSALVAAGA 103 (290)
T ss_pred HHHHHcCCCCCCEEeecCHHHHHHHHHhCC
Confidence 3444556 8889999999999888777643
No 265
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=68.50 E-value=64 Score=26.37 Aligned_cols=95 Identities=14% Similarity=0.111 Sum_probs=58.8
Q ss_pred eEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCc-----------------------cccHHHHHHHH
Q 024042 56 SLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSI-----------------------QRTELFQAASL 111 (273)
Q Consensus 56 ~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~-----------------------~~~~~~~~~~~ 111 (273)
+|+++ |-..++...+..+.+.+.+. ..++.+|.-=.+....... ...++.+.+.+
T Consensus 3 tI~ii-gT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga 81 (403)
T PF06792_consen 3 TIAII-GTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGA 81 (403)
T ss_pred EEEEE-EccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHH
Confidence 44444 54555546677777777776 9999999754443332210 01122233334
Q ss_pred HHHHHHh----CCccEEEEEeccchHHHHHHHHhCCcccceEEE
Q 024042 112 GKLLEKI----GVERFSVVGTSYGGFVAYHMARMWPERVEKVVI 151 (273)
Q Consensus 112 ~~~~~~~----~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~ 151 (273)
..++..+ .+.-++-+|-|.|..++..+....|--+-++++
T Consensus 82 ~~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmV 125 (403)
T PF06792_consen 82 ARFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPIGFPKLMV 125 (403)
T ss_pred HHHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCCCCCeEEE
Confidence 4444444 235578899999999999999988866666655
No 266
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=68.39 E-value=7.5 Score=29.66 Aligned_cols=32 Identities=34% Similarity=0.353 Sum_probs=25.1
Q ss_pred HHHHHHHhCCccEEEEEeccchHHHHHHHHhC
Q 024042 111 LGKLLEKIGVERFSVVGTSYGGFVAYHMARMW 142 (273)
Q Consensus 111 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 142 (273)
+.+.+++.+...-.+.|-|+|+.++..+|...
T Consensus 28 VL~aLeE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 28 ILQALEEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 44455666777678999999999999998763
No 267
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=68.11 E-value=8 Score=27.22 Aligned_cols=30 Identities=30% Similarity=0.293 Sum_probs=23.0
Q ss_pred HHHHhCCccEEEEEeccchHHHHHHHHhCC
Q 024042 114 LLEKIGVERFSVVGTSYGGFVAYHMARMWP 143 (273)
Q Consensus 114 ~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~ 143 (273)
.++..+...-.+.|-|.|+.+|..++...+
T Consensus 21 ~L~e~g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 21 ALEEEGIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHCCCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 334446666689999999999999987654
No 268
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=67.70 E-value=7.4 Score=30.34 Aligned_cols=32 Identities=34% Similarity=0.292 Sum_probs=25.9
Q ss_pred HHHHHHHhCCccEEEEEeccchHHHHHHHHhC
Q 024042 111 LGKLLEKIGVERFSVVGTSYGGFVAYHMARMW 142 (273)
Q Consensus 111 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 142 (273)
+.+.++..+...-.+.|-|+|+.++..+|...
T Consensus 29 Vl~aL~e~gi~~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 29 VLKALEEAGIPIDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred HHHHHHHcCCCccEEEecCHHHHHHHHHHcCC
Confidence 44556666778889999999999999999754
No 269
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=65.61 E-value=9.5 Score=27.96 Aligned_cols=32 Identities=31% Similarity=0.271 Sum_probs=24.6
Q ss_pred HHHHHHhCCccEEEEEeccchHHHHHHHHhCC
Q 024042 112 GKLLEKIGVERFSVVGTSYGGFVAYHMARMWP 143 (273)
Q Consensus 112 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~ 143 (273)
.+.++..+...-.+.|.|.|+.+|..++...+
T Consensus 17 l~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 17 LKALAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 33444456666689999999999999998764
No 270
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=64.85 E-value=12 Score=26.30 Aligned_cols=30 Identities=37% Similarity=0.358 Sum_probs=22.4
Q ss_pred HHHHHhCCccEEEEEeccchHHHHHHHHhC
Q 024042 113 KLLEKIGVERFSVVGTSYGGFVAYHMARMW 142 (273)
Q Consensus 113 ~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 142 (273)
+.++..+...-.+.|-|.|+.+|..++...
T Consensus 20 ~~L~~~~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 20 KALEEAGIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHcCCCeeEEEEECHHHHHHHHHHcCC
Confidence 334444555668999999999999998654
No 271
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=63.43 E-value=36 Score=21.66 Aligned_cols=75 Identities=16% Similarity=0.105 Sum_probs=45.5
Q ss_pred CCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHh----CCccEEEEE
Q 024042 52 LKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKI----GVERFSVVG 127 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~l~G 127 (273)
...|+|||.--+.... .....+...+...+.|+-+|...+|. .+.+.+..+ ....+++-|
T Consensus 12 ~~~~VVifSKs~C~~c-~~~k~ll~~~~v~~~vvELD~~~~g~---------------eiq~~l~~~tg~~tvP~vFI~G 75 (104)
T KOG1752|consen 12 SENPVVIFSKSSCPYC-HRAKELLSDLGVNPKVVELDEDEDGS---------------EIQKALKKLTGQRTVPNVFIGG 75 (104)
T ss_pred hcCCEEEEECCcCchH-HHHHHHHHhCCCCCEEEEccCCCCcH---------------HHHHHHHHhcCCCCCCEEEECC
Confidence 4567888887544333 33445555555558888888653331 233333333 346788889
Q ss_pred eccchHHHHHHHHhC
Q 024042 128 TSYGGFVAYHMARMW 142 (273)
Q Consensus 128 ~S~Gg~~a~~~a~~~ 142 (273)
.+.||.--+......
T Consensus 76 k~iGG~~dl~~lh~~ 90 (104)
T KOG1752|consen 76 KFIGGASDLMALHKS 90 (104)
T ss_pred EEEcCHHHHHHHHHc
Confidence 999998766665543
No 272
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=63.33 E-value=86 Score=25.97 Aligned_cols=71 Identities=17% Similarity=0.134 Sum_probs=52.4
Q ss_pred HHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcc--cceEE
Q 024042 74 QVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPER--VEKVV 150 (273)
Q Consensus 74 ~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~--v~~~v 150 (273)
-++.+... |+|+.+|-.|.-. ..++..+.+.++-+.+.+..+.+|--++=|.-|...|..+.+. +.++|
T Consensus 174 al~~ak~~~~DvvIvDTAGRl~--------ide~Lm~El~~Ik~~~~P~E~llVvDam~GQdA~~~A~aF~e~l~itGvI 245 (451)
T COG0541 174 ALEKAKEEGYDVVIVDTAGRLH--------IDEELMDELKEIKEVINPDETLLVVDAMIGQDAVNTAKAFNEALGITGVI 245 (451)
T ss_pred HHHHHHHcCCCEEEEeCCCccc--------ccHHHHHHHHHHHhhcCCCeEEEEEecccchHHHHHHHHHhhhcCCceEE
Confidence 33444445 8999999775422 3456677788888888888999999999999999999877553 67777
Q ss_pred Ee
Q 024042 151 IA 152 (273)
Q Consensus 151 ~~ 152 (273)
+.
T Consensus 246 lT 247 (451)
T COG0541 246 LT 247 (451)
T ss_pred EE
Confidence 63
No 273
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=61.37 E-value=0.66 Score=35.47 Aligned_cols=37 Identities=30% Similarity=0.452 Sum_probs=25.8
Q ss_pred CCCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecC
Q 024042 52 LKKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDL 89 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~ 89 (273)
.+.|.+++.||+++.. .........+... +.++..+.
T Consensus 47 ~~~p~v~~~h~~~~~~-~~~~~~~~~l~~~~~~~~~~~~ 84 (299)
T COG1073 47 KKLPAVVFLHGFGSSK-EQSLGYAVLLAEKGYRVLAGDA 84 (299)
T ss_pred ccCceEEeccCccccc-cCcchHHHHhhhceeEEeeecc
Confidence 5789999999999888 5544455555555 77666553
No 274
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=59.22 E-value=9.2 Score=31.40 Aligned_cols=33 Identities=24% Similarity=0.176 Sum_probs=24.5
Q ss_pred HHHHHhCCccEEEEEeccchHHHHHHHHhCCcc
Q 024042 113 KLLEKIGVERFSVVGTSYGGFVAYHMARMWPER 145 (273)
Q Consensus 113 ~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~ 145 (273)
+.+...+..+-++.|-|.|+.+|..++...++.
T Consensus 93 kaL~E~gl~p~vIsGTSaGAivAal~as~~~ee 125 (421)
T cd07230 93 KALFEANLLPRIISGSSAGSIVAAILCTHTDEE 125 (421)
T ss_pred HHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHH
Confidence 333344566668999999999999999865544
No 275
>PRK02399 hypothetical protein; Provisional
Probab=58.70 E-value=1e+02 Score=25.30 Aligned_cols=94 Identities=16% Similarity=0.111 Sum_probs=57.4
Q ss_pred EEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCc-----------------------cccHHHHHHHHHH
Q 024042 58 VLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSI-----------------------QRTELFQAASLGK 113 (273)
Q Consensus 58 i~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~-----------------------~~~~~~~~~~~~~ 113 (273)
|++=|-..++...+..+...+.+. ..|+.+|.-..|....... ...++.+.+....
T Consensus 6 I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~~ 85 (406)
T PRK02399 6 IYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAAA 85 (406)
T ss_pred EEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHHH
Confidence 444465666646666777777665 9999999843332211110 0111223334444
Q ss_pred HHHHh----CCccEEEEEeccchHHHHHHHHhCCcccceEEE
Q 024042 114 LLEKI----GVERFSVVGTSYGGFVAYHMARMWPERVEKVVI 151 (273)
Q Consensus 114 ~~~~~----~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~ 151 (273)
+++.+ ...-++-+|-|.|..++..+....|--+-++++
T Consensus 86 ~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPiG~PKlmV 127 (406)
T PRK02399 86 FVRELYERGDVAGVIGLGGSGGTALATPAMRALPIGVPKLMV 127 (406)
T ss_pred HHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCCCCCeEEE
Confidence 44433 345688899999999999999988866666554
No 276
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=57.85 E-value=17 Score=27.68 Aligned_cols=30 Identities=20% Similarity=0.118 Sum_probs=22.2
Q ss_pred HHHhCCc-cEEEEEeccchHHHHHHHHhCCc
Q 024042 115 LEKIGVE-RFSVVGTSYGGFVAYHMARMWPE 144 (273)
Q Consensus 115 ~~~~~~~-~i~l~G~S~Gg~~a~~~a~~~~~ 144 (273)
+...+.. .-.++|.|.|+.+|..++.....
T Consensus 20 l~e~~~~~fd~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 20 FLEAGIRPFDLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred HHHcCCCCCCEEEEECHHHHhHHHHHhCCcc
Confidence 3344554 44899999999999999887543
No 277
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=56.74 E-value=5.9 Score=32.28 Aligned_cols=37 Identities=24% Similarity=0.224 Sum_probs=26.4
Q ss_pred HHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceE
Q 024042 113 KLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKV 149 (273)
Q Consensus 113 ~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~ 149 (273)
+.+...+..+-++.|-|.|+.+|..++...++.+..+
T Consensus 87 kaL~e~gllp~iI~GtSAGAivaalla~~t~~el~~~ 123 (407)
T cd07232 87 KALLDADLLPNVISGTSGGSLVAALLCTRTDEELKQL 123 (407)
T ss_pred HHHHhCCCCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 3333446666689999999999999998655544333
No 278
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=56.49 E-value=88 Score=24.85 Aligned_cols=32 Identities=16% Similarity=-0.050 Sum_probs=23.4
Q ss_pred cHHHHHHHHHHHHHHhC-CccEEEEEeccchHH
Q 024042 103 TELFQAASLGKLLEKIG-VERFSVVGTSYGGFV 134 (273)
Q Consensus 103 ~~~~~~~~~~~~~~~~~-~~~i~l~G~S~Gg~~ 134 (273)
...+.++.+...++... ..+++|+=|+.=|..
T Consensus 118 ~~~~~~~~i~~~l~~~~~~~~l~lvIHnIDg~~ 150 (326)
T PF04084_consen 118 SPSEQLDFIISYLESRPSPPPLYLVIHNIDGPS 150 (326)
T ss_pred CHHHHHHHHHHHHhccCCCCceEEEEECCCChh
Confidence 55566666777776664 578999999988765
No 279
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=56.34 E-value=12 Score=30.28 Aligned_cols=36 Identities=22% Similarity=0.124 Sum_probs=26.4
Q ss_pred HHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccc
Q 024042 112 GKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVE 147 (273)
Q Consensus 112 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~ 147 (273)
.+.+...+..+-++.|-|.|+.+|..+|...++.+.
T Consensus 102 ~kaL~e~gl~p~~i~GtS~Gaivaa~~a~~~~~e~~ 137 (391)
T cd07229 102 VKALWLRGLLPRIITGTATGALIAALVGVHTDEELL 137 (391)
T ss_pred HHHHHHcCCCCceEEEecHHHHHHHHHHcCCHHHHH
Confidence 344445567677899999999999999986544433
No 280
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=56.10 E-value=24 Score=20.89 Aligned_cols=24 Identities=29% Similarity=0.393 Sum_probs=18.8
Q ss_pred CCccEEEEEeccchHHHHHHHHhC
Q 024042 119 GVERFSVVGTSYGGFVAYHMARMW 142 (273)
Q Consensus 119 ~~~~i~l~G~S~Gg~~a~~~a~~~ 142 (273)
+.+++.++|-|.|=.+|.+.+..+
T Consensus 38 GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 38 GPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp S-SEEEEES-SSHHHHHHHHHHHH
T ss_pred CCceEEEEecCCcccHHHHHHHHh
Confidence 457899999999999998887765
No 281
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=55.99 E-value=66 Score=24.61 Aligned_cols=69 Identities=10% Similarity=0.060 Sum_probs=44.3
Q ss_pred CCCeEEEEcCCCCch-hHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCC-ccEEEEEec
Q 024042 53 KKPSLVLIHGFGPEA-IWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGV-ERFSVVGTS 129 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~-~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~l~G~S 129 (273)
..|+||++.|+.+++ ....+.+...|..+ ++|.++.-|. +.+..-..+-.+-.++.. +.+.|+=.|
T Consensus 54 ~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~Pt-----------~eE~~~p~lWRfw~~lP~~G~i~IF~RS 122 (264)
T TIGR03709 54 RRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAPS-----------AEELDHDFLWRIHKALPERGEIGIFNRS 122 (264)
T ss_pred CCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCCC-----------HHHHcCchHHHHHHhCCCCCeEEEEcCc
Confidence 468999999987655 46677888888887 9999886551 111112224445555533 667777666
Q ss_pred cch
Q 024042 130 YGG 132 (273)
Q Consensus 130 ~Gg 132 (273)
+=+
T Consensus 123 WY~ 125 (264)
T TIGR03709 123 HYE 125 (264)
T ss_pred ccc
Confidence 544
No 282
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=55.59 E-value=7.8 Score=30.23 Aligned_cols=30 Identities=20% Similarity=0.167 Sum_probs=22.6
Q ss_pred HHHHHhCCccEEEEEeccchHHHHHHHHhC
Q 024042 113 KLLEKIGVERFSVVGTSYGGFVAYHMARMW 142 (273)
Q Consensus 113 ~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 142 (273)
+.+...+..+-++.|-|.|+.+|..++...
T Consensus 88 kaL~e~gl~p~~i~GsSaGAivaa~~~~~t 117 (323)
T cd07231 88 RTLVEHQLLPRVIAGSSVGSIVCAIIATRT 117 (323)
T ss_pred HHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 334444666668999999999999988753
No 283
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=55.40 E-value=78 Score=23.64 Aligned_cols=69 Identities=6% Similarity=0.052 Sum_probs=45.4
Q ss_pred CCCeEEEEcCCCCch-hHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHH-HHHHHHHHHHhCC-ccEEEEEe
Q 024042 53 KKPSLVLIHGFGPEA-IWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQ-AASLGKLLEKIGV-ERFSVVGT 128 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~-~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~-~~~~~~~~~~~~~-~~i~l~G~ 128 (273)
+.|+||++.|+.+++ ....+.+...|..+ +.|.++..| +.++. -..+-.+-+.+.. +.+.++=-
T Consensus 29 ~~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~p------------t~eE~~~p~lwRfw~~lP~~G~i~IF~r 96 (230)
T TIGR03707 29 GARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKP------------SDRERTQWYFQRYVQHLPAAGEIVLFDR 96 (230)
T ss_pred CCCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCC------------CHHHHcChHHHHHHHhCCCCCeEEEEeC
Confidence 468999999986655 35677888888887 999988765 22222 2224445555543 67877777
Q ss_pred ccchH
Q 024042 129 SYGGF 133 (273)
Q Consensus 129 S~Gg~ 133 (273)
|+=+-
T Consensus 97 SwY~~ 101 (230)
T TIGR03707 97 SWYNR 101 (230)
T ss_pred chhhh
Confidence 75444
No 284
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=55.39 E-value=34 Score=26.86 Aligned_cols=97 Identities=18% Similarity=0.185 Sum_probs=54.3
Q ss_pred CeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEeccch-
Q 024042 55 PSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGG- 132 (273)
Q Consensus 55 ~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg- 132 (273)
-+++++.-.. . ..|..+-+.+..+ +.-.-.=++-+|.-...........-...+..++..+...+++|+|-|-==
T Consensus 214 apvfYvSnSP--w-~~f~~L~efi~~~~~P~GPl~L~~~g~~~~~i~~sga~rK~~~l~nil~~~p~~kfvLVGDsGE~D 290 (373)
T COG4850 214 APVFYVSNSP--W-QLFPTLQEFITNRNFPYGPLLLRRWGGVLDNIIESGAARKGQSLRNILRRYPDRKFVLVGDSGEHD 290 (373)
T ss_pred CCeEEecCCh--h-HhHHHHHHHHhcCCCCCCchhHhhcCCcccccccchhhhcccHHHHHHHhCCCceEEEecCCCCcC
Confidence 4566664322 1 4455555666555 433333333333221111111222234456667778888999999999332
Q ss_pred -HHHHHHHHhCCcccceEEEecC
Q 024042 133 -FVAYHMARMWPERVEKVVIASS 154 (273)
Q Consensus 133 -~~a~~~a~~~~~~v~~~v~~~~ 154 (273)
.+=..++.++|++|.++.+=+.
T Consensus 291 peIYae~v~~fP~RIl~I~IRdv 313 (373)
T COG4850 291 PEIYAEMVRCFPNRILGIYIRDV 313 (373)
T ss_pred HHHHHHHHHhCccceeeEeeeec
Confidence 3445667789999999887544
No 285
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=55.32 E-value=14 Score=31.43 Aligned_cols=31 Identities=19% Similarity=0.366 Sum_probs=24.5
Q ss_pred HHHH-HHhCCccEEEEEeccchHHHHHHHHhC
Q 024042 112 GKLL-EKIGVERFSVVGTSYGGFVAYHMARMW 142 (273)
Q Consensus 112 ~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 142 (273)
.+++ +..++++-.++|||+|=..|+.++.-.
T Consensus 255 a~ll~~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 255 TQLLCDEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 3445 467889999999999998888877654
No 286
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=54.38 E-value=38 Score=24.80 Aligned_cols=37 Identities=16% Similarity=0.060 Sum_probs=21.9
Q ss_pred CCCeEEEEcCCCCchhH--hHHHHHHhhcCC-CeEEeecC
Q 024042 53 KKPSLVLIHGFGPEAIW--QWRKQVQFFAPH-FNVYVPDL 89 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~--~~~~~~~~l~~~-~~v~~~d~ 89 (273)
+.+.|.|++-.+.+... ........|.+. ..+.-++.
T Consensus 31 ~~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l 70 (224)
T COG3340 31 KRKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHL 70 (224)
T ss_pred CCceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeec
Confidence 46789999987665511 223444556554 66666554
No 287
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=54.23 E-value=26 Score=27.52 Aligned_cols=19 Identities=32% Similarity=0.389 Sum_probs=16.4
Q ss_pred EEEEeccchHHHHHHHHhC
Q 024042 124 SVVGTSYGGFVAYHMARMW 142 (273)
Q Consensus 124 ~l~G~S~Gg~~a~~~a~~~ 142 (273)
.+.|.|.||.+|..++..+
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 5789999999999998744
No 288
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=53.25 E-value=22 Score=26.50 Aligned_cols=32 Identities=28% Similarity=0.219 Sum_probs=23.1
Q ss_pred HHHHHHhCCc--cEEEEEeccchHHHHHHHHhCC
Q 024042 112 GKLLEKIGVE--RFSVVGTSYGGFVAYHMARMWP 143 (273)
Q Consensus 112 ~~~~~~~~~~--~i~l~G~S~Gg~~a~~~a~~~~ 143 (273)
.+.+...+.. .-.+.|-|.|+.+|..++...+
T Consensus 18 l~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 18 LSLLIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 3444444554 3479999999999999998753
No 289
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=52.90 E-value=77 Score=24.49 Aligned_cols=56 Identities=14% Similarity=0.132 Sum_probs=30.0
Q ss_pred CeEEeecCCCCCCCCCCCccccHHHHH--------HHHHHHHHHhCCccEEEEEecc-chHHHHHHH
Q 024042 82 FNVYVPDLIFFGHSTTRSIQRTELFQA--------ASLGKLLEKIGVERFSVVGTSY-GGFVAYHMA 139 (273)
Q Consensus 82 ~~v~~~d~~g~g~s~~~~~~~~~~~~~--------~~~~~~~~~~~~~~i~l~G~S~-Gg~~a~~~a 139 (273)
-+++.+|..|-=..++.........++ .++.++++.. ++-+++|-|- ||.+.-...
T Consensus 60 ~~i~~vD~~Gll~~~r~~l~~~~~~~a~~~~~~~~~~L~e~i~~v--~ptvlIG~S~~~g~ft~evv 124 (279)
T cd05312 60 KKIWLVDSKGLLTKDRKDLTPFKKPFARKDEEKEGKSLLEVVKAV--KPTVLIGLSGVGGAFTEEVV 124 (279)
T ss_pred CeEEEEcCCCeEeCCCCcchHHHHHHHhhcCcccCCCHHHHHHhc--CCCEEEEeCCCCCCCCHHHH
Confidence 388999998843332221111111122 2455555554 4559999995 675544433
No 290
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=51.19 E-value=79 Score=21.82 Aligned_cols=60 Identities=15% Similarity=-0.036 Sum_probs=37.3
Q ss_pred HHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHH
Q 024042 72 RKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMAR 140 (273)
Q Consensus 72 ~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~ 140 (273)
..+...+.++-.|++.|.+|-- .+.+++++.+..+.+ .+.+=.+++|-|.|=.-++...+
T Consensus 58 ~~il~~i~~~~~vi~Ld~~Gk~--------~sSe~fA~~l~~~~~-~G~~i~f~IGG~~Gl~~~~~~~a 117 (155)
T COG1576 58 EAILAAIPKGSYVVLLDIRGKA--------LSSEEFADFLERLRD-DGRDISFLIGGADGLSEAVKARA 117 (155)
T ss_pred HHHHHhcCCCCeEEEEecCCCc--------CChHHHHHHHHHHHh-cCCeEEEEEeCcccCCHHHHHHH
Confidence 3455677777789999988633 344555555554433 34233567899998766655543
No 291
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=50.89 E-value=20 Score=27.20 Aligned_cols=15 Identities=20% Similarity=0.488 Sum_probs=12.6
Q ss_pred CCccEEEEEeccchH
Q 024042 119 GVERFSVVGTSYGGF 133 (273)
Q Consensus 119 ~~~~i~l~G~S~Gg~ 133 (273)
....|+++|||+|..
T Consensus 233 ~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEV 247 (270)
T ss_pred CCCEEEEEeCCCchh
Confidence 447899999999975
No 292
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=49.67 E-value=79 Score=22.00 Aligned_cols=47 Identities=21% Similarity=0.220 Sum_probs=24.7
Q ss_pred HHHHHHHHHHh--CCccEEEEEeccchHHHHHHHHhCCcccceEEEecC
Q 024042 108 AASLGKLLEKI--GVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASS 154 (273)
Q Consensus 108 ~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~ 154 (273)
.+.+.++++.+ ..++|+++|-|..|..-+.++...++.+..++=.+|
T Consensus 54 ~~~l~~~L~~~~~~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np 102 (160)
T PF08484_consen 54 KAELREFLEKLKAEGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNP 102 (160)
T ss_dssp HHHHHHHHHHHHHTT--EEEE---SHHHHHHHHHT--TTTS--EEES-G
T ss_pred HHHHHHHHHHHHHcCCEEEEECcchHHHHHHHHhCCCcceeEEEEeCCh
Confidence 34445555444 337899999999999888888766666776665544
No 293
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=49.20 E-value=96 Score=22.22 Aligned_cols=39 Identities=13% Similarity=0.159 Sum_probs=27.1
Q ss_pred CCCCCeEEEEcCCCCchhHhH-HHHHHhhcCC-CeEEeecC
Q 024042 51 TLKKPSLVLIHGFGPEAIWQW-RKQVQFFAPH-FNVYVPDL 89 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~~~~-~~~~~~l~~~-~~v~~~d~ 89 (273)
...++.+|++-|..++..... ..+.+.|.+. ++++..|=
T Consensus 19 ~~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDG 59 (197)
T COG0529 19 KGQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDG 59 (197)
T ss_pred hCCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecC
Confidence 345678999999887773433 3444555555 99999983
No 294
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=48.66 E-value=31 Score=25.93 Aligned_cols=20 Identities=25% Similarity=0.209 Sum_probs=17.7
Q ss_pred EEEEeccchHHHHHHHHhCC
Q 024042 124 SVVGTSYGGFVAYHMARMWP 143 (273)
Q Consensus 124 ~l~G~S~Gg~~a~~~a~~~~ 143 (273)
.++|-|.|+.+|..++...+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 89999999999999998653
No 295
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=48.06 E-value=57 Score=22.56 Aligned_cols=52 Identities=15% Similarity=0.046 Sum_probs=30.3
Q ss_pred HHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEeccch
Q 024042 73 KQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGG 132 (273)
Q Consensus 73 ~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg 132 (273)
.+...+.++-.++++|-.|- ..+..++++.+..+...-..+=++++|-+.|=
T Consensus 59 ~il~~i~~~~~~i~Ld~~Gk--------~~sS~~fA~~l~~~~~~g~~~i~F~IGG~~G~ 110 (155)
T PF02590_consen 59 RILKKIPPNDYVILLDERGK--------QLSSEEFAKKLERWMNQGKSDIVFIIGGADGL 110 (155)
T ss_dssp HHHCTSHTTSEEEEE-TTSE--------E--HHHHHHHHHHHHHTTS-EEEEEE-BTTB-
T ss_pred HHHhhccCCCEEEEEcCCCc--------cCChHHHHHHHHHHHhcCCceEEEEEecCCCC
Confidence 34445556677889997753 34666777777776654322446788999983
No 296
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=47.97 E-value=64 Score=22.37 Aligned_cols=37 Identities=16% Similarity=0.146 Sum_probs=23.5
Q ss_pred CCeEEEEcCCCCchhHhH-HHHHHhhcCC-CeEEeecCC
Q 024042 54 KPSLVLIHGFGPEAIWQW-RKQVQFFAPH-FNVYVPDLI 90 (273)
Q Consensus 54 ~~~vi~~hG~~~~~~~~~-~~~~~~l~~~-~~v~~~d~~ 90 (273)
++.+|++-|..++..... ..+.+.|.+. +.++.+|-.
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDgD 39 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDGD 39 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecCc
Confidence 468999999887773333 3444556555 889988743
No 297
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=47.52 E-value=24 Score=27.45 Aligned_cols=27 Identities=22% Similarity=0.166 Sum_probs=21.1
Q ss_pred hCCccEEEEEeccchHHHHHHHHhCCc
Q 024042 118 IGVERFSVVGTSYGGFVAYHMARMWPE 144 (273)
Q Consensus 118 ~~~~~i~l~G~S~Gg~~a~~~a~~~~~ 144 (273)
.+..+-++.|.|.|+.+|..++....+
T Consensus 94 ~~l~~~~i~GtSaGAi~aa~~~~~~~~ 120 (298)
T cd07206 94 QDLLPRVISGSSAGAIVAALLGTHTDE 120 (298)
T ss_pred cCCCCCEEEEEcHHHHHHHHHHcCCcH
Confidence 455556799999999999999875433
No 298
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=47.33 E-value=64 Score=27.09 Aligned_cols=63 Identities=19% Similarity=0.188 Sum_probs=41.8
Q ss_pred CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHh---------CCcccceEEEe
Q 024042 82 FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARM---------WPERVEKVVIA 152 (273)
Q Consensus 82 ~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~---------~~~~v~~~v~~ 152 (273)
|.|+.+|-.|.-... ......+..+++.-.++.|..+|.-+=|.=++.-+.+ .|..++++++.
T Consensus 467 fDVvLiDTAGR~~~~--------~~lm~~l~k~~~~~~pd~i~~vgealvg~dsv~q~~~fn~al~~~~~~r~id~~~lt 538 (587)
T KOG0781|consen 467 FDVVLIDTAGRMHNN--------APLMTSLAKLIKVNKPDLILFVGEALVGNDSVDQLKKFNRALADHSTPRLIDGILLT 538 (587)
T ss_pred CCEEEEeccccccCC--------hhHHHHHHHHHhcCCCceEEEehhhhhCcHHHHHHHHHHHHHhcCCCccccceEEEE
Confidence 999999987654332 2345667777776677889999988777655543332 24457777664
No 299
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=47.09 E-value=24 Score=24.47 Aligned_cols=44 Identities=20% Similarity=0.148 Sum_probs=24.5
Q ss_pred CCCCCCCCC---CccccHHHHHHHH----HHHHHHh----CCccEEEEEeccchH
Q 024042 90 IFFGHSTTR---SIQRTELFQAASL----GKLLEKI----GVERFSVVGTSYGGF 133 (273)
Q Consensus 90 ~g~g~s~~~---~~~~~~~~~~~~~----~~~~~~~----~~~~i~l~G~S~Gg~ 133 (273)
-|||..... ...++..+.+..+ ..+.+.. .+++|.|+|.|++..
T Consensus 62 VGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 62 VGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp E--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 367765211 1245777777777 4444444 347899999999987
No 300
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=46.11 E-value=71 Score=23.09 Aligned_cols=42 Identities=21% Similarity=0.094 Sum_probs=22.9
Q ss_pred CCCeEEEEcCCCCch--hHhHHHHHHhhcCC-CeEEeecCCCCCC
Q 024042 53 KKPSLVLIHGFGPEA--IWQWRKQVQFFAPH-FNVYVPDLIFFGH 94 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~--~~~~~~~~~~l~~~-~~v~~~d~~g~g~ 94 (273)
..++++++||..... ...-..+...|.+. ..+...-+++-|.
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH 187 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGH 187 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SS
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCC
Confidence 578999999976443 12223444555443 4455555554443
No 301
>COG0218 Predicted GTPase [General function prediction only]
Probab=45.30 E-value=46 Score=24.13 Aligned_cols=58 Identities=10% Similarity=0.146 Sum_probs=32.5
Q ss_pred hhccEEEEecCCCCCCChHHH---HHHHHHhc--CCcE--EEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 210 FVHDVLIVWGDQDQIFPLKMA---TELKELLG--KKAR--LEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 210 ~~~p~l~i~g~~D~~~~~~~~---~~~~~~~~--~~~~--~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
...|++++.-..|.+-..+.. ...++.+. +... +..++-.... .-+++.+.|.+|+..
T Consensus 134 ~~i~~~vv~tK~DKi~~~~~~k~l~~v~~~l~~~~~~~~~~~~~ss~~k~----Gi~~l~~~i~~~~~~ 198 (200)
T COG0218 134 LGIPVIVVLTKADKLKKSERNKQLNKVAEELKKPPPDDQWVVLFSSLKKK----GIDELKAKILEWLKE 198 (200)
T ss_pred cCCCeEEEEEccccCChhHHHHHHHHHHHHhcCCCCccceEEEEeccccc----CHHHHHHHHHHHhhc
Confidence 334899999999998754443 33343331 2222 3444322222 146777788887764
No 302
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=44.91 E-value=38 Score=23.29 Aligned_cols=19 Identities=32% Similarity=0.259 Sum_probs=16.5
Q ss_pred ccEEEEEeccchHHHHHHH
Q 024042 121 ERFSVVGTSYGGFVAYHMA 139 (273)
Q Consensus 121 ~~i~l~G~S~Gg~~a~~~a 139 (273)
..-.+.|.|.|+.++..++
T Consensus 28 ~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 28 CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCCEEEEEcHHHHHHHHHh
Confidence 4557889999999999988
No 303
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=43.95 E-value=1.1e+02 Score=21.33 Aligned_cols=58 Identities=19% Similarity=0.125 Sum_probs=40.9
Q ss_pred cEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 213 DVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 213 p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
.++++...-|.-.+...++++.+.+ .+.++.+|-.+|.....++...+.+.+..++.+
T Consensus 41 D~i~lG~w~d~G~~d~~~~~fl~~l-~~KkV~lF~T~G~~~~s~~~~~~~~~~~~~~~~ 98 (160)
T PF12641_consen 41 DLIFLGFWIDKGTPDKDMKEFLKKL-KGKKVALFGTAGAGPDSEYAKKILKNVEALLPK 98 (160)
T ss_pred CEEEEEcCccCCCCCHHHHHHHHHc-cCCeEEEEEecCCCCchHHHHHHHHHHHHhhcc
Confidence 4677777778887888888888888 677777776666655455555666666666653
No 304
>PLN03019 carbonic anhydrase
Probab=43.90 E-value=44 Score=26.36 Aligned_cols=32 Identities=25% Similarity=0.242 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHhCCccEEEEEeccchHHHHHH
Q 024042 107 QAASLGKLLEKIGVERFSVVGTSYGGFVAYHM 138 (273)
Q Consensus 107 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~ 138 (273)
....|...+..++.+.|+++|||-=|.+...+
T Consensus 201 v~aSIEYAV~~L~V~~IVV~GHs~CGaVkAal 232 (330)
T PLN03019 201 VGAAIEYAVLHLKVENIVVIGHSACGGIKGLM 232 (330)
T ss_pred cchhHHHHHHHhCCCEEEEecCCCchHHHHHH
Confidence 34667778888999999999999766555444
No 305
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=43.71 E-value=1e+02 Score=23.10 Aligned_cols=37 Identities=19% Similarity=0.127 Sum_probs=22.0
Q ss_pred CCCeEEEEcCCC--CchhHhH-HHHHHhhcCC-CeEEeecCC
Q 024042 53 KKPSLVLIHGFG--PEAIWQW-RKQVQFFAPH-FNVYVPDLI 90 (273)
Q Consensus 53 ~~~~vi~~hG~~--~~~~~~~-~~~~~~l~~~-~~v~~~d~~ 90 (273)
..|.|+|++=.+ ... ..| +.....+.+- +.+..++..
T Consensus 30 ~~~~v~fIPtAs~~~~~-~~y~~~~~~af~~lG~~v~~l~~~ 70 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSW-DDYTAKVAEALAPLGIEVTGIHRV 70 (233)
T ss_pred CCCeEEEECCCCCCCCH-HHHHHHHHHHHHHCCCEEEEeccc
Confidence 467899999765 333 333 3344455554 777777654
No 306
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=42.90 E-value=41 Score=25.33 Aligned_cols=20 Identities=25% Similarity=0.376 Sum_probs=17.2
Q ss_pred EEEEeccchHHHHHHHHhCC
Q 024042 124 SVVGTSYGGFVAYHMARMWP 143 (273)
Q Consensus 124 ~l~G~S~Gg~~a~~~a~~~~ 143 (273)
.+.|-|+|+.+|..++...+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 49999999999999987643
No 307
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=42.40 E-value=49 Score=25.84 Aligned_cols=34 Identities=24% Similarity=0.211 Sum_probs=26.4
Q ss_pred HHHHHHHHHHhCC----ccEEEEEec--cchHHHHHHHHh
Q 024042 108 AASLGKLLEKIGV----ERFSVVGTS--YGGFVAYHMARM 141 (273)
Q Consensus 108 ~~~~~~~~~~~~~----~~i~l~G~S--~Gg~~a~~~a~~ 141 (273)
...+.+++++++. +++.++|.| +|.-+|.++..+
T Consensus 143 p~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 143 PSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHC
Confidence 4556777777643 789999997 899999888765
No 308
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=41.61 E-value=47 Score=25.18 Aligned_cols=22 Identities=18% Similarity=0.184 Sum_probs=18.2
Q ss_pred cEEEEEeccchHHHHHHHHhCC
Q 024042 122 RFSVVGTSYGGFVAYHMARMWP 143 (273)
Q Consensus 122 ~i~l~G~S~Gg~~a~~~a~~~~ 143 (273)
.-.++|-|.|+..+..++...+
T Consensus 33 ~~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 33 ARMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred CCEEEEEcHHHHHHHHHHhCCC
Confidence 3469999999999999987654
No 309
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=41.10 E-value=44 Score=25.28 Aligned_cols=21 Identities=19% Similarity=0.135 Sum_probs=17.7
Q ss_pred EEEEEeccchHHHHHHHHhCC
Q 024042 123 FSVVGTSYGGFVAYHMARMWP 143 (273)
Q Consensus 123 i~l~G~S~Gg~~a~~~a~~~~ 143 (273)
-.+.|-|.|+..|..++...+
T Consensus 38 ~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 38 RKIYGASAGALTATALVTGVC 58 (249)
T ss_pred CeEEEEcHHHHHHHHHHcCCC
Confidence 468899999999999887653
No 310
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=40.28 E-value=66 Score=18.74 Aligned_cols=12 Identities=42% Similarity=0.905 Sum_probs=8.5
Q ss_pred CCCeEEEEcCCC
Q 024042 53 KKPSLVLIHGFG 64 (273)
Q Consensus 53 ~~~~vi~~hG~~ 64 (273)
..|.++++||..
T Consensus 30 ~~~~~~lvhGga 41 (71)
T PF10686_consen 30 RHPDMVLVHGGA 41 (71)
T ss_pred hCCCEEEEECCC
Confidence 346778888865
No 311
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=40.27 E-value=56 Score=21.34 Aligned_cols=31 Identities=32% Similarity=0.284 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHhCCccEEEEEeccchHHHH
Q 024042 106 FQAASLGKLLEKIGVERFSVVGTSYGGFVAY 136 (273)
Q Consensus 106 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~ 136 (273)
.....+...+..++.+.++++||+--|.+..
T Consensus 44 ~~~~sl~~av~~l~v~~ivV~gHt~CG~v~a 74 (119)
T cd00382 44 DVLASLEYAVEVLGVKHIIVCGHTDCGAVKA 74 (119)
T ss_pred cHHHHHHHHHHhhCCCEEEEEccCCCcHHHH
Confidence 3456677778888999999999987665543
No 312
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=40.23 E-value=1.4e+02 Score=23.18 Aligned_cols=69 Identities=14% Similarity=0.270 Sum_probs=41.0
Q ss_pred CCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCC---------------CCCCCCCCccccHHHHHHHHHHHHH
Q 024042 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIF---------------FGHSTTRSIQRTELFQAASLGKLLE 116 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g---------------~g~s~~~~~~~~~~~~~~~~~~~~~ 116 (273)
.-|.|+|.-|.++. ++.|+.. |+|+..|+.= .|.-++.....+.+...+.+.+.++
T Consensus 251 ~vPmi~fakG~g~~--------Le~l~~tG~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP~~ly~s~e~it~~v~~mv~ 322 (359)
T KOG2872|consen 251 PVPMILFAKGSGGA--------LEELAQTGYDVVGLDWTVDPAEARRRVGNRVTLQGNLDPGVLYGSKEEITQLVKQMVK 322 (359)
T ss_pred CCceEEEEcCcchH--------HHHHHhcCCcEEeecccccHHHHHHhhCCceEEecCCChHHhcCCHHHHHHHHHHHHH
Confidence 34788888886532 3344444 9999999851 1111111112356666777888888
Q ss_pred HhCCccE-EEEEec
Q 024042 117 KIGVERF-SVVGTS 129 (273)
Q Consensus 117 ~~~~~~i-~l~G~S 129 (273)
..|.++. .=.||.
T Consensus 323 ~fG~~ryI~NLGHG 336 (359)
T KOG2872|consen 323 DFGKSRYIANLGHG 336 (359)
T ss_pred HhCccceEEecCCC
Confidence 8886553 335764
No 313
>COG1092 Predicted SAM-dependent methyltransferases [General function prediction only]
Probab=39.22 E-value=1.7e+02 Score=24.05 Aligned_cols=51 Identities=12% Similarity=0.014 Sum_probs=30.9
Q ss_pred CCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEeccch
Q 024042 81 HFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGG 132 (273)
Q Consensus 81 ~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg 132 (273)
.|+||.+|.|.++.|.... ..-..++.+-+...++-+..+-+.++--|.+.
T Consensus 290 ~fDlIilDPPsF~r~k~~~-~~~~rdy~~l~~~~~~iL~pgG~l~~~s~~~~ 340 (393)
T COG1092 290 KFDLIILDPPSFARSKKQE-FSAQRDYKDLNDLALRLLAPGGTLVTSSCSRH 340 (393)
T ss_pred cccEEEECCcccccCcccc-hhHHHHHHHHHHHHHHHcCCCCEEEEEecCCc
Confidence 4999999999999887544 22333444444444455554445555544444
No 314
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=38.65 E-value=42 Score=26.35 Aligned_cols=22 Identities=36% Similarity=0.413 Sum_probs=18.5
Q ss_pred CCccEEEEEeccchHHHHHHHH
Q 024042 119 GVERFSVVGTSYGGFVAYHMAR 140 (273)
Q Consensus 119 ~~~~i~l~G~S~Gg~~a~~~a~ 140 (273)
+.++..+.|||+|=+.|+.++.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 4678899999999998887765
No 315
>COG3621 Patatin [General function prediction only]
Probab=38.51 E-value=80 Score=25.01 Aligned_cols=54 Identities=22% Similarity=0.176 Sum_probs=32.7
Q ss_pred cCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCC----ccEE-EEEeccchHHHHHHHHhCC
Q 024042 79 APHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGV----ERFS-VVGTSYGGFVAYHMARMWP 143 (273)
Q Consensus 79 ~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~----~~i~-l~G~S~Gg~~a~~~a~~~~ 143 (273)
..++++..+|=-|. .. .....+...+++... +.+. +-|.|.||.+++.+|...+
T Consensus 6 msk~rIlsldGGGv--rG---------~i~lE~lr~ieqiqGkkl~e~FDl~~GTSiGgilal~La~~ks 64 (394)
T COG3621 6 MSKYRILSLDGGGV--RG---------AILLEKLRIIEQIQGKKLCEYFDLIGGTSIGGILALGLALGKS 64 (394)
T ss_pred ccceeEEEecCCcc--cc---------HHHHHHHHHHHHHhCCcceeeEeeecCccHHHHHHHHHhcCCC
Confidence 33578888873321 11 334445555655432 3344 4589999999999987643
No 316
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=38.24 E-value=42 Score=26.26 Aligned_cols=17 Identities=24% Similarity=0.485 Sum_probs=15.2
Q ss_pred EEEEeccchHHHHHHHH
Q 024042 124 SVVGTSYGGFVAYHMAR 140 (273)
Q Consensus 124 ~l~G~S~Gg~~a~~~a~ 140 (273)
.+.|-|.||.+|..++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 58899999999999875
No 317
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=37.93 E-value=1.6e+02 Score=21.36 Aligned_cols=74 Identities=15% Similarity=0.135 Sum_probs=44.0
Q ss_pred HHHHHHhhcC-CCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCC--cccc
Q 024042 71 WRKQVQFFAP-HFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWP--ERVE 147 (273)
Q Consensus 71 ~~~~~~~l~~-~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~--~~v~ 147 (273)
.....+.+.. +++++.+|-+|... ...+..+.+..+++......++++=-+..+.-.+..+..+- -.+.
T Consensus 72 ~~~~l~~~~~~~~D~vlIDT~Gr~~--------~d~~~~~el~~~~~~~~~~~~~LVlsa~~~~~~~~~~~~~~~~~~~~ 143 (196)
T PF00448_consen 72 AREALEKFRKKGYDLVLIDTAGRSP--------RDEELLEELKKLLEALNPDEVHLVLSATMGQEDLEQALAFYEAFGID 143 (196)
T ss_dssp HHHHHHHHHHTTSSEEEEEE-SSSS--------THHHHHHHHHHHHHHHSSSEEEEEEEGGGGGHHHHHHHHHHHHSSTC
T ss_pred HHHHHHHHhhcCCCEEEEecCCcch--------hhHHHHHHHHHHhhhcCCccceEEEecccChHHHHHHHHHhhcccCc
Confidence 3344444544 49999999987642 23445677777787776666666655555555554443331 2377
Q ss_pred eEEEe
Q 024042 148 KVVIA 152 (273)
Q Consensus 148 ~~v~~ 152 (273)
++|+-
T Consensus 144 ~lIlT 148 (196)
T PF00448_consen 144 GLILT 148 (196)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 88763
No 318
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=37.71 E-value=41 Score=26.27 Aligned_cols=18 Identities=22% Similarity=0.444 Sum_probs=15.7
Q ss_pred CCCCCeEEEEcCCCCchh
Q 024042 51 TLKKPSLVLIHGFGPEAI 68 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~~ 68 (273)
.+.+|.++=+||+.|+..
T Consensus 106 ~p~KPLvLSfHG~tGTGK 123 (344)
T KOG2170|consen 106 NPRKPLVLSFHGWTGTGK 123 (344)
T ss_pred CCCCCeEEEecCCCCCch
Confidence 578999999999999883
No 319
>PLN03014 carbonic anhydrase
Probab=37.52 E-value=67 Score=25.57 Aligned_cols=32 Identities=25% Similarity=0.242 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHhCCccEEEEEeccchHHHHHH
Q 024042 107 QAASLGKLLEKIGVERFSVVGTSYGGFVAYHM 138 (273)
Q Consensus 107 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~ 138 (273)
....+...+..++.+.|+++|||-=|.+...+
T Consensus 206 v~asLEYAV~~L~V~~IVV~GHs~CGaV~Aa~ 237 (347)
T PLN03014 206 VGAAIEYAVLHLKVENIVVIGHSACGGIKGLM 237 (347)
T ss_pred chhHHHHHHHHhCCCEEEEeCCCCchHHHHHH
Confidence 45667777888999999999999766554443
No 320
>PRK14974 cell division protein FtsY; Provisional
Probab=36.60 E-value=2.2e+02 Score=22.80 Aligned_cols=64 Identities=20% Similarity=0.188 Sum_probs=39.6
Q ss_pred CCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCC--cccceEEEe
Q 024042 81 HFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWP--ERVEKVVIA 152 (273)
Q Consensus 81 ~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~--~~v~~~v~~ 152 (273)
++.++.+|-.|... ......+.+..+.+......++++.-+.-|.-+..-+..+. -.+.++|+-
T Consensus 222 ~~DvVLIDTaGr~~--------~~~~lm~eL~~i~~~~~pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIlT 287 (336)
T PRK14974 222 GIDVVLIDTAGRMH--------TDANLMDELKKIVRVTKPDLVIFVGDALAGNDAVEQAREFNEAVGIDGVILT 287 (336)
T ss_pred CCCEEEEECCCccC--------CcHHHHHHHHHHHHhhCCceEEEeeccccchhHHHHHHHHHhcCCCCEEEEe
Confidence 47888888886543 22334555666666666666777777776766665555432 246777763
No 321
>PRK06490 glutamine amidotransferase; Provisional
Probab=36.24 E-value=1.9e+02 Score=21.79 Aligned_cols=33 Identities=9% Similarity=-0.091 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHhCCccEEEEEeccchHHHHHHH
Q 024042 107 QAASLGKLLEKIGVERFSVVGTSYGGFVAYHMA 139 (273)
Q Consensus 107 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a 139 (273)
+...+.++++..-..++=++|.|+|..+...+.
T Consensus 71 wi~~~~~~i~~~~~~~~PvLGIC~G~Qlla~al 103 (239)
T PRK06490 71 FIRREIDWISVPLKENKPFLGICLGAQMLARHL 103 (239)
T ss_pred HHHHHHHHHHHHHHCCCCEEEECHhHHHHHHHc
Confidence 344445555543223456999999998776664
No 322
>PLN00416 carbonate dehydratase
Probab=35.95 E-value=92 Score=23.76 Aligned_cols=33 Identities=24% Similarity=0.251 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHhCCccEEEEEeccchHHHHHHH
Q 024042 107 QAASLGKLLEKIGVERFSVVGTSYGGFVAYHMA 139 (273)
Q Consensus 107 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a 139 (273)
....+...+..++.+.|+++|||-=|.+...+.
T Consensus 126 ~~asLEyAv~~L~V~~IVV~GHs~CGaV~Aa~~ 158 (258)
T PLN00416 126 VGAAVEYAVVHLKVENILVIGHSCCGGIKGLMS 158 (258)
T ss_pred chhHHHHHHHHhCCCEEEEecCCCchHHHHHHh
Confidence 345677778889999999999997666554443
No 323
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=35.82 E-value=25 Score=26.10 Aligned_cols=38 Identities=18% Similarity=0.324 Sum_probs=27.0
Q ss_pred CCCeEEEEcCCCCch-hHhHHHHHHhhcCC-CeEEeecCC
Q 024042 53 KKPSLVLIHGFGPEA-IWQWRKQVQFFAPH-FNVYVPDLI 90 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~-~~~~~~~~~~l~~~-~~v~~~d~~ 90 (273)
+.|+||++.|+.+++ ....+.+...|..+ ++|.++.-|
T Consensus 29 ~~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~p 68 (228)
T PF03976_consen 29 GIPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKP 68 (228)
T ss_dssp HHEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS-
T ss_pred CCcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCC
Confidence 456999999987766 35566777778777 899988765
No 324
>KOG4287 consensus Pectin acetylesterase and similar proteins [Cell wall/membrane/envelope biogenesis]
Probab=35.80 E-value=40 Score=26.80 Aligned_cols=24 Identities=17% Similarity=0.320 Sum_probs=19.4
Q ss_pred CCChhhHHhhhhccEEEEecCCCC
Q 024042 200 DIVPDFFFNDFVHDVLIVWGDQDQ 223 (273)
Q Consensus 200 ~~~~~~~~~~~~~p~l~i~g~~D~ 223 (273)
-..|...++.+..|+.++...-|.
T Consensus 258 CfFpq~v~~~irtP~F~vN~afD~ 281 (402)
T KOG4287|consen 258 CFFPQYVLKTIRTPVFLVNAAFDS 281 (402)
T ss_pred hcchHHHHhhcCCceEehhhhhhH
Confidence 457888889999999999877764
No 325
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=35.37 E-value=55 Score=24.65 Aligned_cols=17 Identities=29% Similarity=0.378 Sum_probs=15.6
Q ss_pred EEEEeccchHHHHHHHH
Q 024042 124 SVVGTSYGGFVAYHMAR 140 (273)
Q Consensus 124 ~l~G~S~Gg~~a~~~a~ 140 (273)
.+.|-|+|+.+|..++.
T Consensus 34 ~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 34 RFAGASAGSLVAAVLLT 50 (246)
T ss_pred EEEEECHHHHHHHHHhc
Confidence 79999999999999984
No 326
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=34.90 E-value=69 Score=22.85 Aligned_cols=32 Identities=19% Similarity=0.118 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHhCCccEEEEEeccchHHHHHH
Q 024042 107 QAASLGKLLEKIGVERFSVVGTSYGGFVAYHM 138 (273)
Q Consensus 107 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~ 138 (273)
....+...+..++.+.|+++|||-=|.+...+
T Consensus 67 ~~asleyAv~~L~v~~IvV~GHs~CGav~a~~ 98 (182)
T cd00883 67 CLSVLQYAVDVLKVKHIIVCGHYGCGGVKAAL 98 (182)
T ss_pred hhhhHHHHHHhcCCCEEEEecCCCchHHHHHH
Confidence 35667777788999999999999766665544
No 327
>KOG2495 consensus NADH-dehydrogenase (ubiquinone) [Energy production and conversion]
Probab=34.48 E-value=50 Score=27.24 Aligned_cols=39 Identities=18% Similarity=0.223 Sum_probs=25.1
Q ss_pred CCCCCCeEEEEc-CCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCC
Q 024042 50 KTLKKPSLVLIH-GFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGH 94 (273)
Q Consensus 50 ~~~~~~~vi~~h-G~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~ 94 (273)
.+.+++.||.+- ||++.+ ++..|... |+|.+++.|.|-.
T Consensus 51 ~~~kKk~vVVLGsGW~a~S------~lk~ldts~YdV~vVSPRnyFl 91 (491)
T KOG2495|consen 51 NGGKKKRVVVLGSGWGAIS------LLKKLDTSLYDVTVVSPRNYFL 91 (491)
T ss_pred CCCCCceEEEEcCchHHHH------HHHhccccccceEEeccccceE
Confidence 345566666665 666544 45555555 9999999887643
No 328
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=34.32 E-value=1.6e+02 Score=20.47 Aligned_cols=54 Identities=13% Similarity=-0.092 Sum_probs=30.8
Q ss_pred HHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEeccchHH
Q 024042 73 KQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFV 134 (273)
Q Consensus 73 ~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~ 134 (273)
.+...+..+-.++++|-+|-- .+..++++.+......-..+-++++|-+.|=.-
T Consensus 59 ~il~~l~~~~~~i~LDe~Gk~--------~sS~~fA~~l~~~~~~g~~~i~F~IGGa~G~~~ 112 (157)
T PRK00103 59 RILAALPKGARVIALDERGKQ--------LSSEEFAQELERWRDDGRSDVAFVIGGADGLSP 112 (157)
T ss_pred HHHhhCCCCCEEEEEcCCCCc--------CCHHHHHHHHHHHHhcCCccEEEEEcCccccCH
Confidence 344555555568888877532 355566666665533221244677888877433
No 329
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=34.25 E-value=1.3e+02 Score=26.03 Aligned_cols=35 Identities=9% Similarity=0.212 Sum_probs=25.6
Q ss_pred CccEEEEEe------ccchHHHHHHHHhCCcccceEEEecCC
Q 024042 120 VERFSVVGT------SYGGFVAYHMARMWPERVEKVVIASSG 155 (273)
Q Consensus 120 ~~~i~l~G~------S~Gg~~a~~~a~~~~~~v~~~v~~~~~ 155 (273)
.++|+++|| |.|+.+++..-+..-++ .+.+.++|.
T Consensus 337 ~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~ 377 (655)
T COG3887 337 SDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPE 377 (655)
T ss_pred cCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECcc
Confidence 589999999 68999998876654443 566666653
No 330
>PLN03006 carbonate dehydratase
Probab=33.72 E-value=68 Score=25.04 Aligned_cols=32 Identities=28% Similarity=0.301 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHhCCccEEEEEeccchHHHHHH
Q 024042 107 QAASLGKLLEKIGVERFSVVGTSYGGFVAYHM 138 (273)
Q Consensus 107 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~ 138 (273)
....|...+..++.+.|+++|||-=|.+...+
T Consensus 158 ~~aSLEYAV~~L~V~~IVV~GHs~CGaV~Aal 189 (301)
T PLN03006 158 TKAALEFSVNTLNVENILVIGHSRCGGIQALM 189 (301)
T ss_pred hhhhHHHHHHHhCCCEEEEecCCCchHHHHHh
Confidence 45667788889999999999999766655433
No 331
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=33.62 E-value=36 Score=27.21 Aligned_cols=18 Identities=39% Similarity=0.296 Sum_probs=15.8
Q ss_pred EEEEeccchHHHHHHHHh
Q 024042 124 SVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 124 ~l~G~S~Gg~~a~~~a~~ 141 (273)
.+.|.|.||.+|..++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 578999999999999864
No 332
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=33.59 E-value=39 Score=23.69 Aligned_cols=21 Identities=29% Similarity=0.123 Sum_probs=16.9
Q ss_pred ccEEEEEeccchHHHHHHHHh
Q 024042 121 ERFSVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 121 ~~i~l~G~S~Gg~~a~~~a~~ 141 (273)
..-.+.|-|.||.+|+.++..
T Consensus 27 ~~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 27 RFDVISGTSAGALNAALLALG 47 (204)
T ss_dssp T-SEEEEECCHHHHHHHHHTC
T ss_pred CccEEEEcChhhhhHHHHHhC
Confidence 445789999999999888766
No 333
>PRK04148 hypothetical protein; Provisional
Probab=33.56 E-value=95 Score=20.89 Aligned_cols=21 Identities=14% Similarity=0.137 Sum_probs=17.2
Q ss_pred ccEEEEEeccchHHHHHHHHh
Q 024042 121 ERFSVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 121 ~~i~l~G~S~Gg~~a~~~a~~ 141 (273)
.++..+|-..|..+|..++..
T Consensus 18 ~kileIG~GfG~~vA~~L~~~ 38 (134)
T PRK04148 18 KKIVELGIGFYFKVAKKLKES 38 (134)
T ss_pred CEEEEEEecCCHHHHHHHHHC
Confidence 569999999888888888754
No 334
>KOG2805 consensus tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Translation, ribosomal structure and biogenesis]
Probab=33.44 E-value=1.9e+02 Score=22.83 Aligned_cols=61 Identities=10% Similarity=0.021 Sum_probs=31.3
Q ss_pred CCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHh
Q 024042 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKI 118 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~ 118 (273)
...++|.+.|.-.++ -.+..|+++ |.|..+-++.+..-+........+...+++..+.+++
T Consensus 5 ~~~VvvamSgGVDSs-----Vaa~Ll~~~g~~v~gv~M~nWd~~de~~s~cp~e~D~~da~~Vc~~L 66 (377)
T KOG2805|consen 5 PDRVVVAMSGGVDSS-----VAARLLAARGYNVTGVFMKNWDSLDEFGSQCPAERDWKDAKRVCKQL 66 (377)
T ss_pred cceEEEEecCCchHH-----HHHHHHHhcCCCeeEEeeeccccccccccCCCchhhHHHHHHHHHHh
Confidence 345777777754444 123345555 8888887776532222222233344444455555444
No 335
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=32.87 E-value=77 Score=21.46 Aligned_cols=28 Identities=18% Similarity=0.111 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHhCCccEEEEEeccchH
Q 024042 106 FQAASLGKLLEKIGVERFSVVGTSYGGF 133 (273)
Q Consensus 106 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~ 133 (273)
+....+...+..++.+.++++||+-=|.
T Consensus 41 ~~~~sl~~av~~l~~~~IiV~gHt~Cg~ 68 (142)
T cd03379 41 DAIRSLVVSVYLLGTREIIVIHHTDCGM 68 (142)
T ss_pred hHHHHHHHHHHHhCCCEEEEEeecCCcc
Confidence 3456677777888999999999984443
No 336
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=32.83 E-value=95 Score=21.65 Aligned_cols=35 Identities=29% Similarity=0.320 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHhC----CccEEEEEec--cchHHHHHHHHh
Q 024042 107 QAASLGKLLEKIG----VERFSVVGTS--YGGFVAYHMARM 141 (273)
Q Consensus 107 ~~~~~~~~~~~~~----~~~i~l~G~S--~Gg~~a~~~a~~ 141 (273)
.+..+.+++++++ .+++.++|.| .|--++.++..+
T Consensus 19 Tp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~ 59 (160)
T PF02882_consen 19 TPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNK 59 (160)
T ss_dssp HHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHT
T ss_pred CHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhC
Confidence 3566777777764 3789999999 466777777665
No 337
>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut
Probab=32.76 E-value=1.9e+02 Score=22.10 Aligned_cols=57 Identities=14% Similarity=0.101 Sum_probs=31.6
Q ss_pred CeEEeecCCCCCCCCCCCc-cc--cH------HHHHHHHHHHHHHhCCccEEEEEecc-chHHHHHHHH
Q 024042 82 FNVYVPDLIFFGHSTTRSI-QR--TE------LFQAASLGKLLEKIGVERFSVVGTSY-GGFVAYHMAR 140 (273)
Q Consensus 82 ~~v~~~d~~g~g~s~~~~~-~~--~~------~~~~~~~~~~~~~~~~~~i~l~G~S~-Gg~~a~~~a~ 140 (273)
-+++.+|..|-=...+... .+ .. .....++.+.++.. ++-+++|-|- ||.+.-....
T Consensus 60 ~~i~~vD~~Gll~~~r~~l~~~~~~~~~~~~~~~~~~~L~eav~~~--kptvlIG~S~~~g~ft~evv~ 126 (254)
T cd00762 60 KRIWXVDRKGLLVKNRKETCPNEYHLARFANPERESGDLEDAVEAA--KPDFLIGVSRVGGAFTPEVIR 126 (254)
T ss_pred ccEEEECCCCeEeCCCCccCHHHHHHHHHcCcccccCCHHHHHHhh--CCCEEEEeCCCCCCCCHHHHH
Confidence 4899999988432222211 10 10 01112466666655 4558999998 8866655443
No 338
>cd01715 ETF_alpha The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin.
Probab=32.72 E-value=1.4e+02 Score=20.80 Aligned_cols=53 Identities=19% Similarity=0.057 Sum_probs=36.2
Q ss_pred CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEec-cchHHHHHHHHhC
Q 024042 82 FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTS-YGGFVAYHMARMW 142 (273)
Q Consensus 82 ~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S-~Gg~~a~~~a~~~ 142 (273)
-+|+.++-+. ...++.+.+++.+.++++..+ ..++|+|+| .|..++-++|.+.
T Consensus 53 d~v~~~~~~~-------~~~~~~~~~a~al~~~i~~~~-p~~Vl~~~t~~g~~la~rlAa~L 106 (168)
T cd01715 53 DKVLVAEDPA-------LAHYLAEPYAPALVALAKKEK-PSHILAGATSFGKDLAPRVAAKL 106 (168)
T ss_pred CEEEEecChh-------hcccChHHHHHHHHHHHHhcC-CCEEEECCCccccchHHHHHHHh
Confidence 4666665431 223566778888888888776 467777655 5668888888775
No 339
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=32.42 E-value=97 Score=29.75 Aligned_cols=24 Identities=33% Similarity=0.564 Sum_probs=19.4
Q ss_pred HHHHHHHHhCCccEEEEEeccchH
Q 024042 110 SLGKLLEKIGVERFSVVGTSYGGF 133 (273)
Q Consensus 110 ~~~~~~~~~~~~~i~l~G~S~Gg~ 133 (273)
.+.+++..+++.+-.++|||.|-.
T Consensus 571 aLtDlLs~lgi~PDGIvGHS~GEl 594 (2376)
T KOG1202|consen 571 ALTDLLSCLGIRPDGIVGHSLGEL 594 (2376)
T ss_pred HHHHHHHhcCCCCCcccccccchh
Confidence 456677778999999999998854
No 340
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=31.76 E-value=1.4e+02 Score=19.13 Aligned_cols=74 Identities=16% Similarity=0.114 Sum_probs=48.3
Q ss_pred eEEEEcCCCCchhHhHHHHHHhhcCC--CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhC-CccEEEEEeccch
Q 024042 56 SLVLIHGFGPEAIWQWRKQVQFFAPH--FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIG-VERFSVVGTSYGG 132 (273)
Q Consensus 56 ~vi~~hG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~G~S~Gg 132 (273)
.||.-|| .-. ......++.+... ..+.++++. ...+.++..+.+.+.++..+ .+.+.++--=.||
T Consensus 2 iii~sHG--~~A-~g~~~~~~~i~G~~~~~i~~~~~~---------~~~~~~~~~~~l~~~i~~~~~~~~vlil~Dl~gg 69 (116)
T PF03610_consen 2 IIIASHG--SLA-EGLLESAEMILGEDQDNIEAVDLY---------PDESIEDFEEKLEEAIEELDEGDGVLILTDLGGG 69 (116)
T ss_dssp EEEEEET--THH-HHHHHHHHHHHTSTCSSEEEEEET---------TTSCHHHHHHHHHHHHHHCCTTSEEEEEESSTTS
T ss_pred EEEEECc--HHH-HHHHHHHHHHcCCCcccEEEEECc---------CCCCHHHHHHHHHHHHHhccCCCcEEEEeeCCCC
Confidence 5788999 333 4455555554333 467777754 23477788888888888876 4667777777777
Q ss_pred HHHHHHHHh
Q 024042 133 FVAYHMARM 141 (273)
Q Consensus 133 ~~a~~~a~~ 141 (273)
.....++..
T Consensus 70 sp~n~a~~~ 78 (116)
T PF03610_consen 70 SPFNEAARL 78 (116)
T ss_dssp HHHHHHHHH
T ss_pred ccchHHHHH
Confidence 666555544
No 341
>PF07521 RMMBL: RNA-metabolising metallo-beta-lactamase; InterPro: IPR011108 The metallo-beta-lactamase fold contains five sequence motifs. The first four motifs are found in IPR001279 from INTERPRO and are common to all metallo-beta-lactamases. The fifth motif appears to be specific to function. This entry represents the fifth motif from metallo-beta-lactamases involved in RNA metabolism [].; PDB: 3ZQ4_D 2I7T_A 2I7V_A 2YCB_B 3BK1_A 3T3N_A 3BK2_A 3T3O_A 3AF5_A 3AF6_A ....
Probab=31.71 E-value=79 Score=16.11 Aligned_cols=19 Identities=16% Similarity=0.322 Sum_probs=13.0
Q ss_pred HHHHHHHHHHhCCccEEEE
Q 024042 108 AASLGKLLEKIGVERFSVV 126 (273)
Q Consensus 108 ~~~~~~~~~~~~~~~i~l~ 126 (273)
.+++..+++.+..++++++
T Consensus 20 ~~~L~~~i~~~~p~~vilV 38 (43)
T PF07521_consen 20 REELLEFIEQLNPRKVILV 38 (43)
T ss_dssp HHHHHHHHHHHCSSEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEe
Confidence 5567777777776666655
No 342
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=31.48 E-value=40 Score=26.07 Aligned_cols=19 Identities=32% Similarity=0.420 Sum_probs=16.6
Q ss_pred EEEEeccchHHHHHHHHhC
Q 024042 124 SVVGTSYGGFVAYHMARMW 142 (273)
Q Consensus 124 ~l~G~S~Gg~~a~~~a~~~ 142 (273)
.+.|-|.||.+|..++...
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 6889999999999998654
No 343
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=31.31 E-value=2.8e+02 Score=22.31 Aligned_cols=62 Identities=15% Similarity=0.044 Sum_probs=33.2
Q ss_pred EEecCCcceEEeecCCccCCCCCCCCCeEEEEcCCCCch-hHhHHHHHHhhcCCCeEEeecCCC
Q 024042 29 TIDIDDETTLHFWGPKLEDDHKTLKKPSLVLIHGFGPEA-IWQWRKQVQFFAPHFNVYVPDLIF 91 (273)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~vi~~hG~~~~~-~~~~~~~~~~l~~~~~v~~~d~~g 91 (273)
.+.-+.+...||...+++--. +-.+++=+|+||.|... .....+.+..-.....|+.+|.-+
T Consensus 187 Qf~np~Np~~hy~ttg~EI~~-q~~g~vDi~V~gaGTGGTitgvGRylke~~~~~kVv~vdp~~ 249 (362)
T KOG1252|consen 187 QFHNPGNPLAHYETTGPEIWR-QLDGKVDIFVAGAGTGGTITGVGRYLKEQNPNIKVVGVDPQE 249 (362)
T ss_pred HhcCCCCcccccccccHHHHH-HhcCCCCEEEeccCCCceeechhHHHHHhCCCCEEEEeCCCc
Confidence 344445556777766532111 22455667788755333 133444444444558888887653
No 344
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=30.91 E-value=2.4e+02 Score=24.86 Aligned_cols=46 Identities=26% Similarity=0.149 Sum_probs=27.3
Q ss_pred CCCCCeEEEEcCCCCch--hHhHHHHHHhhcCC-CeEEeecCC--CCCCCC
Q 024042 51 TLKKPSLVLIHGFGPEA--IWQWRKQVQFFAPH-FNVYVPDLI--FFGHST 96 (273)
Q Consensus 51 ~~~~~~vi~~hG~~~~~--~~~~~~~~~~l~~~-~~v~~~d~~--g~g~s~ 96 (273)
+.-+.+++++||-.... ...-..+...|... ..|-.+-+| ||+.+.
T Consensus 548 ~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~ 598 (620)
T COG1506 548 DNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSR 598 (620)
T ss_pred cccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCC
Confidence 34567899999976544 13334556666654 555555555 455544
No 345
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=30.87 E-value=1.6e+02 Score=23.10 Aligned_cols=30 Identities=17% Similarity=0.082 Sum_probs=17.1
Q ss_pred eEEEEcCCCCchhHhHHHHHHhhcC-C-CeEEeec
Q 024042 56 SLVLIHGFGPEAIWQWRKQVQFFAP-H-FNVYVPD 88 (273)
Q Consensus 56 ~vi~~hG~~~~~~~~~~~~~~~l~~-~-~~v~~~d 88 (273)
-||+.||.. . ..-..+.....+ + |+|++.+
T Consensus 164 EviLT~g~S--r-TV~~FL~~A~kk~Rkf~viVaE 195 (353)
T KOG1465|consen 164 EVILTLGSS--R-TVENFLKHAAKKGRKFRVIVAE 195 (353)
T ss_pred ceEEecCcc--H-HHHHHHHHHHhccCceEEEEee
Confidence 488899932 2 333333333334 3 9988776
No 346
>KOG3179 consensus Predicted glutamine synthetase [Nucleotide transport and metabolism]
Probab=30.03 E-value=56 Score=23.73 Aligned_cols=38 Identities=13% Similarity=0.205 Sum_probs=27.0
Q ss_pred cHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHH
Q 024042 103 TELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMAR 140 (273)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~ 140 (273)
+..++...+..+++.+...+.-++|-++|-.+..++..
T Consensus 74 ~d~dWI~KLcs~~kkld~mkkkvlGICFGHQiiara~G 111 (245)
T KOG3179|consen 74 SDADWIKKLCSFVKKLDFMKKKVLGICFGHQIIARAKG 111 (245)
T ss_pred ccchHHHHHHHHHHHHHhhccceEEEeccHHHHHHhhC
Confidence 44455555666667776666778999999988877653
No 347
>KOG1578 consensus Predicted carbonic anhydrase involved in protection against oxidative damage [Inorganic ion transport and metabolism]
Probab=29.70 E-value=36 Score=25.85 Aligned_cols=34 Identities=26% Similarity=0.256 Sum_probs=26.8
Q ss_pred HHHHHHHHHHhCCccEEEEEeccchHHHHHHHHh
Q 024042 108 AASLGKLLEKIGVERFSVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 108 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 141 (273)
...+...+..++.++|.++|||.=|.++..+.-.
T Consensus 141 ~AalE~aV~~lkvenIiv~ghs~cgGik~~m~~~ 174 (276)
T KOG1578|consen 141 GAALEYAVTTLKVENIIVIGHSLCGGIKGLMSFS 174 (276)
T ss_pred cchHHHHHHHhccceEEEeccccCCchhhccccc
Confidence 4556777888899999999999988877666543
No 348
>PRK05665 amidotransferase; Provisional
Probab=29.22 E-value=97 Score=23.29 Aligned_cols=35 Identities=14% Similarity=0.054 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHH
Q 024042 105 LFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMA 139 (273)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a 139 (273)
..+...+.++++..-..++=++|.|+|..+...++
T Consensus 74 ~pwi~~l~~~i~~~~~~~~PilGIC~GhQlla~Al 108 (240)
T PRK05665 74 DPWIQTLKTYLLKLYERGDKLLGVCFGHQLLALLL 108 (240)
T ss_pred chHHHHHHHHHHHHHhcCCCEEEEeHHHHHHHHHh
Confidence 34555556666554333455999999998776665
No 349
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=29.18 E-value=2.7e+02 Score=21.46 Aligned_cols=74 Identities=19% Similarity=0.091 Sum_probs=44.5
Q ss_pred CCCeEEEEcCCCCchhHhHHHHHHhhcCC--CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEecc
Q 024042 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPH--FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSY 130 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~ 130 (273)
+-|.+++.--..-.. .....+.+.+++. -.++.+|+| .+..+.+....++.+.+.|.++.=+.
T Consensus 94 ~~Pivlm~Y~Npi~~-~Gie~F~~~~~~~GvdGlivpDLP--------------~ee~~~~~~~~~~~gi~~I~lvaPtt 158 (265)
T COG0159 94 KVPIVLMTYYNPIFN-YGIEKFLRRAKEAGVDGLLVPDLP--------------PEESDELLKAAEKHGIDPIFLVAPTT 158 (265)
T ss_pred CCCEEEEEeccHHHH-hhHHHHHHHHHHcCCCEEEeCCCC--------------hHHHHHHHHHHHHcCCcEEEEeCCCC
Confidence 345555544333222 3344555555444 788999987 23355677777788889998887776
Q ss_pred chHHHHHHHHh
Q 024042 131 GGFVAYHMARM 141 (273)
Q Consensus 131 Gg~~a~~~a~~ 141 (273)
.---.-..+..
T Consensus 159 ~~~rl~~i~~~ 169 (265)
T COG0159 159 PDERLKKIAEA 169 (265)
T ss_pred CHHHHHHHHHh
Confidence 65544444443
No 350
>cd01985 ETF The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=28.71 E-value=2.1e+02 Score=20.14 Aligned_cols=53 Identities=17% Similarity=0.104 Sum_probs=36.2
Q ss_pred CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEec-cchHHHHHHHHhC
Q 024042 82 FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTS-YGGFVAYHMARMW 142 (273)
Q Consensus 82 ~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S-~Gg~~a~~~a~~~ 142 (273)
-.|+.++-+. ...++.+.+++.+.++++..+ ..++++|++ .|+.++-++|.+.
T Consensus 61 d~v~~~~~~~-------~~~~~~~~~a~~l~~~i~~~~-p~~Vl~g~t~~g~~la~rlA~~L 114 (181)
T cd01985 61 DKVLLVEDPA-------LAGYDPEATAKALAALIKKEK-PDLILAGATSIGKQLAPRVAALL 114 (181)
T ss_pred CEEEEEecCc-------ccCCChHHHHHHHHHHHHHhC-CCEEEECCcccccCHHHHHHHHh
Confidence 4666666442 223567778888888888776 467777754 5668888888775
No 351
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=28.60 E-value=1e+02 Score=24.64 Aligned_cols=87 Identities=18% Similarity=0.294 Sum_probs=48.5
Q ss_pred CCeEEEEcCCCCch------hHhHHHHHHhhcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEE
Q 024042 54 KPSLVLIHGFGPEA------IWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVG 127 (273)
Q Consensus 54 ~~~vi~~hG~~~~~------~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G 127 (273)
...+|++|+...+. .+.|+.+.+.+.+.-.+-.+|.-..|..++ +.+..+..++-+++. + .=+++.
T Consensus 197 ~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG-----~~d~DA~avR~F~~~-g--~~~~la 268 (427)
T KOG1411|consen 197 EGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASG-----DLDKDAQAVRLFVED-G--HEILLA 268 (427)
T ss_pred CCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccC-----CchhhHHHHHHHHHc-C--CceEee
Confidence 34699999754332 268998888877765555566665554432 344445555555554 1 124444
Q ss_pred eccchHHHHHHHHhCCcccceEEEec
Q 024042 128 TSYGGFVAYHMARMWPERVEKVVIAS 153 (273)
Q Consensus 128 ~S~Gg~~a~~~a~~~~~~v~~~v~~~ 153 (273)
.|+.-.+. .|.+++.++-+++
T Consensus 269 QSyAKNMG-----LYgERvGa~svvc 289 (427)
T KOG1411|consen 269 QSYAKNMG-----LYGERVGALSVVC 289 (427)
T ss_pred hhhhhhcc-----hhhhccceeEEEe
Confidence 55433222 2455666665555
No 352
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=28.50 E-value=1.2e+02 Score=21.41 Aligned_cols=72 Identities=22% Similarity=0.142 Sum_probs=37.7
Q ss_pred EEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCC------ccccHHHHHHHHHHHHHHhCCccEEEEEeccc
Q 024042 58 VLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRS------IQRTELFQAASLGKLLEKIGVERFSVVGTSYG 131 (273)
Q Consensus 58 i~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~------~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~G 131 (273)
|++-|.|++. ..-..++..|..+|.--.+-+|..-.+.... .++..+. -....++.++..-=+|+|.|--
T Consensus 44 vl~cGNGgSa-adAqHfaael~gRf~~eR~~lpaIaLt~dsS~lTai~NDy~yd~---vFsRqveA~g~~GDvLigISTS 119 (176)
T COG0279 44 VLACGNGGSA-ADAQHFAAELTGRFEKERPSLPAIALSTDSSVLTAIANDYGYDE---VFSRQVEALGQPGDVLIGISTS 119 (176)
T ss_pred EEEECCCcch-hhHHHHHHHHhhHHHhcCCCCCeeEeecccHHHhhhhccccHHH---HHHHHHHhcCCCCCEEEEEeCC
Confidence 3444666766 5555666666555554444444433332111 1233332 2334455666555578998888
Q ss_pred hH
Q 024042 132 GF 133 (273)
Q Consensus 132 g~ 133 (273)
|.
T Consensus 120 GN 121 (176)
T COG0279 120 GN 121 (176)
T ss_pred CC
Confidence 74
No 353
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=28.27 E-value=1e+02 Score=22.19 Aligned_cols=32 Identities=22% Similarity=0.235 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHhCCccEEEEEeccchHHHHHH
Q 024042 107 QAASLGKLLEKIGVERFSVVGTSYGGFVAYHM 138 (273)
Q Consensus 107 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~ 138 (273)
....+...+..++.+.|+++|||-=|.+...+
T Consensus 73 ~~asleyav~~l~v~~ivV~GH~~Cgav~Aa~ 104 (190)
T cd00884 73 TSAAIEYAVAVLKVEHIVVCGHSDCGGIRALL 104 (190)
T ss_pred hhhhHHHHHHHhCCCEEEEeCCCcchHHHHHh
Confidence 45667777888999999999999766655544
No 354
>PF07643 DUF1598: Protein of unknown function (DUF1598); InterPro: IPR011487 This is a family of Rhodopirellula baltica hypothetical proteins of about 500 amino acids in length.
Probab=27.58 E-value=1.5e+02 Score=18.02 Aligned_cols=32 Identities=16% Similarity=0.204 Sum_probs=26.2
Q ss_pred HHHHHHHHhCCccEEEEEeccchHHHHHHHHh
Q 024042 110 SLGKLLEKIGVERFSVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 110 ~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 141 (273)
++..+-+.+|...|.+.|.+...++|..+...
T Consensus 32 ~~~~l~~~LG~QdV~V~Gip~~sh~ArvLVeA 63 (84)
T PF07643_consen 32 WVDGLRQALGPQDVTVYGIPADSHFARVLVEA 63 (84)
T ss_pred HHHHHHHHhCCceeEEEccCCccHHHHHHHHh
Confidence 45566677899999999999999999877654
No 355
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=27.47 E-value=1e+02 Score=22.81 Aligned_cols=34 Identities=12% Similarity=0.219 Sum_probs=18.7
Q ss_pred CeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeec
Q 024042 55 PSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPD 88 (273)
Q Consensus 55 ~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d 88 (273)
..||++|............+++.|.++ |.++.++
T Consensus 187 g~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 187 GAILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 357777764322224556666666555 7666553
No 356
>COG3023 ampD N-acetyl-anhydromuramyl-L-alanine amidase [Cell envelope biogenesis, outer membrane]
Probab=27.46 E-value=90 Score=23.61 Aligned_cols=41 Identities=15% Similarity=0.013 Sum_probs=23.2
Q ss_pred CCCCCCCCCCccccHHHHHHHHHHHHHHh-CCccEEEEEecc
Q 024042 90 IFFGHSTTRSIQRTELFQAASLGKLLEKI-GVERFSVVGTSY 130 (273)
Q Consensus 90 ~g~g~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~G~S~ 130 (273)
+|+-.+..+.....+....+-+.+++..+ ++.+-.++|||-
T Consensus 114 ~G~~~~~~py~~AQiqal~~L~k~i~~ryP~I~~~~I~GHsD 155 (257)
T COG3023 114 RGTDASGPPYTEAQIQALIALLKDIIARYPNITPERIVGHSD 155 (257)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHccCCCHHHcccccc
Confidence 34433333333334455555566666666 566677899984
No 357
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=27.34 E-value=1.1e+02 Score=27.41 Aligned_cols=22 Identities=32% Similarity=0.295 Sum_probs=17.9
Q ss_pred CCccEEEEEeccchHHHHHHHH
Q 024042 119 GVERFSVVGTSYGGFVAYHMAR 140 (273)
Q Consensus 119 ~~~~i~l~G~S~Gg~~a~~~a~ 140 (273)
+..--++.|.|+||..+..+|.
T Consensus 64 ~~~~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 64 RVRVDVISGTSAGGINGVLLAY 85 (739)
T ss_pred CCCCceEEeeCHHHHHHHHHHc
Confidence 4444578999999999988886
No 358
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=26.81 E-value=2.1e+02 Score=21.38 Aligned_cols=68 Identities=18% Similarity=0.173 Sum_probs=31.2
Q ss_pred HHHHHhhcCC-C-eEEeecCCCCCCCCCCCc--------cccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHH
Q 024042 72 RKQVQFFAPH-F-NVYVPDLIFFGHSTTRSI--------QRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMAR 140 (273)
Q Consensus 72 ~~~~~~l~~~-~-~v~~~d~~g~g~s~~~~~--------~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~ 140 (273)
..++...+++ - .++.+-.+ +|.|..... ..+...+..++..-+.+.|.++++++..-.|-.-++..+.
T Consensus 43 ~~~a~~~a~~~~~~lv~P~i~-yG~s~~h~~fpGTisl~~~t~~~~l~di~~sl~~~Gf~~ivivngHgGN~~~l~~~~ 120 (237)
T PF02633_consen 43 EAVAERAAERLGEALVLPPIP-YGCSPHHMGFPGTISLSPETLIALLRDILRSLARHGFRRIVIVNGHGGNIAALEAAA 120 (237)
T ss_dssp HHHHHHHHHHHTHEEE---B---BB-GCCTTSTT-BBB-HHHHHHHHHHHHHHHHHHT--EEEEEESSTTHHHHHHHHH
T ss_pred HHHHHHHHHHCCcEEEeCCCc-cccCcccCCCCCeEEeCHHHHHHHHHHHHHHHHHcCCCEEEEEECCHhHHHHHHHHH
Confidence 3444555544 3 45555444 444432211 1244455555555556668899888766555443555444
No 359
>PF10561 UPF0565: Uncharacterised protein family UPF0565; InterPro: IPR018881 This family of proteins has no known function.
Probab=26.71 E-value=98 Score=24.25 Aligned_cols=22 Identities=18% Similarity=0.234 Sum_probs=17.7
Q ss_pred ccEEEEEeccchHHHHHHHHhC
Q 024042 121 ERFSVVGTSYGGFVAYHMARMW 142 (273)
Q Consensus 121 ~~i~l~G~S~Gg~~a~~~a~~~ 142 (273)
.++.|+|+|-|+.+.-++..+.
T Consensus 193 ~~~~LiGFSKGcvVLNqll~El 214 (303)
T PF10561_consen 193 PPLTLIGFSKGCVVLNQLLYEL 214 (303)
T ss_pred CceEEEEecCcchHHHHHHHHH
Confidence 3799999999998887776543
No 360
>PLN02154 carbonic anhydrase
Probab=26.65 E-value=1.2e+02 Score=23.61 Aligned_cols=32 Identities=28% Similarity=0.292 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHhCCccEEEEEeccchHHHHHH
Q 024042 107 QAASLGKLLEKIGVERFSVVGTSYGGFVAYHM 138 (273)
Q Consensus 107 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~ 138 (273)
....+...+..++.+.|+++|||-=|.+...+
T Consensus 152 ~~aslEyAv~~L~v~~IvV~GHs~CGAV~Aal 183 (290)
T PLN02154 152 TNSALEFAVTTLQVENIIVMGHSNCGGIAALM 183 (290)
T ss_pred hhhHHHHHHHHhCCCEEEEecCCCchHHHHHH
Confidence 45567777888999999999999766655544
No 361
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=26.63 E-value=1.7e+02 Score=19.98 Aligned_cols=35 Identities=23% Similarity=0.216 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHH
Q 024042 105 LFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMA 139 (273)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a 139 (273)
......+...+..++.+.++++||+-=|.+...+.
T Consensus 39 ~~~~~sle~av~~l~v~~IiV~gHt~CGa~~~~~~ 73 (153)
T PF00484_consen 39 DSALASLEYAVYHLGVKEIIVCGHTDCGAIKAALD 73 (153)
T ss_dssp HHHHHHHHHHHHTST-SEEEEEEETT-HHHHHHHH
T ss_pred cchhhheeeeeecCCCCEEEEEcCCCchHHHHHHh
Confidence 44566677777888999999999997776664433
No 362
>COG0518 GuaA GMP synthase - Glutamine amidotransferase domain [Nucleotide transport and metabolism]
Probab=26.37 E-value=2.6e+02 Score=20.36 Aligned_cols=33 Identities=18% Similarity=0.175 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHhCCccEEEEEeccchHHHHHHH
Q 024042 107 QAASLGKLLEKIGVERFSVVGTSYGGFVAYHMA 139 (273)
Q Consensus 107 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a 139 (273)
++.....++..+.....-++|.|+|..+....+
T Consensus 64 w~~~~~~~i~~~~~p~~pvLGIC~G~Ql~A~~l 96 (198)
T COG0518 64 WLPREKDLIKDAGVPGKPVLGICLGHQLLAKAL 96 (198)
T ss_pred cchhHHHHHHHhCCCCCCEEEEChhHHHHHHHh
Confidence 567777777777665556999999998765554
No 363
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=26.24 E-value=2.2e+02 Score=20.84 Aligned_cols=25 Identities=24% Similarity=0.122 Sum_probs=15.2
Q ss_pred HHHHHHHhCCccEEEEEeccchHHH
Q 024042 111 LGKLLEKIGVERFSVVGTSYGGFVA 135 (273)
Q Consensus 111 ~~~~~~~~~~~~i~l~G~S~Gg~~a 135 (273)
+...++..+.-..+++=||+||...
T Consensus 114 ir~~~e~~d~~~~~~i~~slgGGTG 138 (216)
T PF00091_consen 114 IRKEIEKCDSLDGFFIVHSLGGGTG 138 (216)
T ss_dssp HHHHHHTSTTESEEEEEEESSSSHH
T ss_pred cchhhccccccccceecccccceec
Confidence 3333333355567888888888743
No 364
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=26.24 E-value=1.5e+02 Score=23.09 Aligned_cols=34 Identities=21% Similarity=0.272 Sum_probs=25.9
Q ss_pred HHHHHHHHHHhCC----ccEEEEEec--cchHHHHHHHHh
Q 024042 108 AASLGKLLEKIGV----ERFSVVGTS--YGGFVAYHMARM 141 (273)
Q Consensus 108 ~~~~~~~~~~~~~----~~i~l~G~S--~Gg~~a~~~a~~ 141 (273)
...+.+++++++. +++.++|.| +|.-+|.++..+
T Consensus 142 p~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~ 181 (284)
T PRK14179 142 PAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDK 181 (284)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHC
Confidence 4456777777643 789999986 888899888765
No 365
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=26.16 E-value=42 Score=26.27 Aligned_cols=17 Identities=41% Similarity=0.663 Sum_probs=14.9
Q ss_pred EEEEeccchHHHHHHHH
Q 024042 124 SVVGTSYGGFVAYHMAR 140 (273)
Q Consensus 124 ~l~G~S~Gg~~a~~~a~ 140 (273)
.+.|-|.||.+|..++.
T Consensus 45 li~GTStGgiiA~~l~~ 61 (309)
T cd07216 45 LIGGTSTGGLIAIMLGR 61 (309)
T ss_pred eeeeccHHHHHHHHhcc
Confidence 67899999999998874
No 366
>PRK07877 hypothetical protein; Provisional
Probab=25.81 E-value=1.8e+02 Score=26.28 Aligned_cols=38 Identities=29% Similarity=0.343 Sum_probs=28.3
Q ss_pred HHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecCC
Q 024042 116 EKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASSG 155 (273)
Q Consensus 116 ~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~ 155 (273)
+.+...+|.|+|-+.|+.++..++.. .-+..+++++.-
T Consensus 103 ~~L~~~~V~IvG~GlGs~~a~~Lara--GvvG~l~lvD~D 140 (722)
T PRK07877 103 ERLGRLRIGVVGLSVGHAIAHTLAAE--GLCGELRLADFD 140 (722)
T ss_pred HHHhcCCEEEEEecHHHHHHHHHHHc--cCCCeEEEEcCC
Confidence 44556889999999988888888765 213778887753
No 367
>PRK02910 light-independent protochlorophyllide reductase subunit B; Provisional
Probab=25.66 E-value=1.3e+02 Score=25.80 Aligned_cols=43 Identities=9% Similarity=0.030 Sum_probs=26.1
Q ss_pred CCeEEEEcCCCCch--hHhHHHHHHhhcCCCeEEeecCCCCCCCC
Q 024042 54 KPSLVLIHGFGPEA--IWQWRKQVQFFAPHFNVYVPDLIFFGHST 96 (273)
Q Consensus 54 ~~~vi~~hG~~~~~--~~~~~~~~~~l~~~~~v~~~d~~g~g~s~ 96 (273)
+|-+|++-..+.+. ......+++.+..+..|+.++.+|+..+.
T Consensus 85 ~P~~I~V~sTC~seiIGdDi~~v~~~~~~~~~Vi~v~t~gf~~~~ 129 (519)
T PRK02910 85 QPDLIVVGPSCTAELLQEDLGGLAKHAGLPIPVLPLELNAYRVKE 129 (519)
T ss_pred CCCEEEEeCCcHHHHhccCHHHHHHHhCCCCCEEEEecCCccccc
Confidence 45566665533222 13345555655555789999999987653
No 368
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=25.66 E-value=4e+02 Score=22.33 Aligned_cols=63 Identities=19% Similarity=0.138 Sum_probs=40.0
Q ss_pred CCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCc--ccceEEE
Q 024042 81 HFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPE--RVEKVVI 151 (273)
Q Consensus 81 ~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~--~v~~~v~ 151 (273)
+|.++.+|.+|.-. ......+.+..+.+......++++--++-|.-+...+..+.+ .+.++|+
T Consensus 182 ~~DvViIDTaGr~~--------~d~~lm~El~~i~~~~~p~e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~Il 246 (429)
T TIGR01425 182 NFDIIIVDTSGRHK--------QEDSLFEEMLQVAEAIQPDNIIFVMDGSIGQAAEAQAKAFKDSVDVGSVII 246 (429)
T ss_pred CCCEEEEECCCCCc--------chHHHHHHHHHHhhhcCCcEEEEEeccccChhHHHHHHHHHhccCCcEEEE
Confidence 49999999997432 223345556666555566667777777777666666655432 3666665
No 369
>PF06289 FlbD: Flagellar protein (FlbD); InterPro: IPR009384 This family consists of several bacterial FlbD flagellar proteins. The exact function of this family is unknown [].
Probab=25.40 E-value=1e+02 Score=17.37 Aligned_cols=33 Identities=9% Similarity=-0.039 Sum_probs=23.8
Q ss_pred CCcEEEEeCCCCCCcCcCChhhHHHHHHHHhccc
Q 024042 239 KKARLEIIENTSHVPQIENPGLFNSIVKNFLRGS 272 (273)
Q Consensus 239 ~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 272 (273)
|+.. +.+-++.++.-.|..+++.+.+.+|-++.
T Consensus 26 PDTv-ItL~~G~k~vV~Es~~eVi~ki~~y~~~i 58 (60)
T PF06289_consen 26 PDTV-ITLTNGKKYVVKESVEEVIEKIIEYRRKI 58 (60)
T ss_pred CCeE-EEEeCCCEEEEECCHHHHHHHHHHHHHhc
Confidence 5544 44445666777888999999999987653
No 370
>KOG2316 consensus Predicted ATPase (PP-loop superfamily) [General function prediction only]
Probab=25.04 E-value=74 Score=23.48 Aligned_cols=62 Identities=19% Similarity=0.164 Sum_probs=37.8
Q ss_pred HhhcCCCeEEeecCCCCCCCCCCCccc--cHHHHHHHHHHHHHHhCCccEEEEEeccchHHHHH
Q 024042 76 QFFAPHFNVYVPDLIFFGHSTTRSIQR--TELFQAASLGKLLEKIGVERFSVVGTSYGGFVAYH 137 (273)
Q Consensus 76 ~~l~~~~~v~~~d~~g~g~s~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~ 137 (273)
..+++-..+=.+-.+=.|.|......| +..+.++|+.+++....-+-.-+=|.|.|+.+.-.
T Consensus 57 ~lyaecm~lPlyrr~i~g~s~nq~l~Y~~t~~DEvEDLy~ll~~VK~~~p~~eaVS~GAIlS~Y 120 (277)
T KOG2316|consen 57 DLYAECMGLPLYRRRIRGRSINQKLQYTKTEGDEVEDLYELLKTVKEKIPDVEAVSVGAILSDY 120 (277)
T ss_pred HHHHHHhcCceeeeeccCcccccccccccCCCchHHHHHHHHHHHHhhCCCceeeehhhhHhHH
Confidence 344443333333333345555444433 56677889988888876444478899999877643
No 371
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=24.74 E-value=1.1e+02 Score=19.93 Aligned_cols=32 Identities=34% Similarity=0.503 Sum_probs=23.0
Q ss_pred cEEEEE-eccchHHHHHHHHhCCcccceEEEecC
Q 024042 122 RFSVVG-TSYGGFVAYHMARMWPERVEKVVIASS 154 (273)
Q Consensus 122 ~i~l~G-~S~Gg~~a~~~a~~~~~~v~~~v~~~~ 154 (273)
|+.|+| ..+.|.-.+.+...+|+ +.-+.+.+.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~-~e~~~~~~~ 33 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPD-FELVALVSS 33 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTST-EEEEEEEES
T ss_pred CEEEECCCCHHHHHHHHHHhcCCC-ccEEEeeee
Confidence 578999 88888888888888875 555544443
No 372
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=24.72 E-value=3.5e+02 Score=21.32 Aligned_cols=122 Identities=16% Similarity=0.098 Sum_probs=61.4
Q ss_pred eeEEecCCcceEEeecCCccCCCC-CCCCCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCC--------------
Q 024042 27 SQTIDIDDETTLHFWGPKLEDDHK-TLKKPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIF-------------- 91 (273)
Q Consensus 27 ~~~~~~~~g~~l~~~~~~~~~~~~-~~~~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g-------------- 91 (273)
...+..+.+...||...+++--.. +..-..+|.--|-+++. ......++.-..+.+++++|..+
T Consensus 142 ~~Qf~NpaN~~aH~~tT~~EI~~~~~g~~d~fVagvGTGGTi-tGvar~Lk~~~p~i~iv~vdP~~S~~~~~G~g~~~i~ 220 (300)
T COG0031 142 LNQFENPANPEAHYETTGPEIWQQTDGKVDAFVAGVGTGGTI-TGVARYLKERNPNVRIVAVDPEGSVLLSGGEGPHKIE 220 (300)
T ss_pred hhhcCCCccHHHHHhhhHHHHHHHhCCCCCEEEEeCCcchhH-HHHHHHHHhhCCCcEEEEECCCCCcccCCCCCCcccC
Confidence 335556667777776665331111 12222444444444544 33333343333447888888764
Q ss_pred -CCCCCCCCcc----------ccHHHHHHHHHHHHHHhCCccEEEEEeccchHHH--HHHHHhCCcccceEEEecC
Q 024042 92 -FGHSTTRSIQ----------RTELFQAASLGKLLEKIGVERFSVVGTSYGGFVA--YHMARMWPERVEKVVIASS 154 (273)
Q Consensus 92 -~g~s~~~~~~----------~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a--~~~a~~~~~~v~~~v~~~~ 154 (273)
.|.+..+... .+.++..+.+..+.+..+ .++|-|.|+.++ ..++.+.+. -+.+|.+.|
T Consensus 221 GIG~~~ip~~~~~~~iD~v~~V~d~~A~~~~r~La~~eG----ilvG~SsGA~~~aa~~~a~~~~~-g~~IVti~p 291 (300)
T COG0031 221 GIGAGFVPENLDLDLIDEVIRVSDEEAIATARRLAREEG----LLVGISSGAALAAALKLAKELPA-GKTIVTILP 291 (300)
T ss_pred CCCCCcCCcccccccCceEEEECHHHHHHHHHHHHHHhC----eeecccHHHHHHHHHHHHHhcCC-CCeEEEEEC
Confidence 2222211110 133344455555555555 799999999765 445555543 344555544
No 373
>PRK05368 homoserine O-succinyltransferase; Provisional
Probab=24.70 E-value=90 Score=24.49 Aligned_cols=31 Identities=13% Similarity=-0.022 Sum_probs=20.6
Q ss_pred HHHHHHHhCCccEEEEEeccchHHHHHHHHh
Q 024042 111 LGKLLEKIGVERFSVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 111 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 141 (273)
+.++++.......-++|-|+|+++++.+..-
T Consensus 124 l~~i~~w~~~~~~s~LgICwGaQa~a~algG 154 (302)
T PRK05368 124 LKEILDWAKTHVTSTLFICWAAQAALYHLYG 154 (302)
T ss_pred HHHHHHHHHHcCCCEEEEcHHHHHHHHHcCC
Confidence 4444443332346799999999998877654
No 374
>COG1634 Uncharacterized Rossmann fold enzyme [General function prediction only]
Probab=24.57 E-value=2.9e+02 Score=20.66 Aligned_cols=23 Identities=30% Similarity=0.418 Sum_probs=18.5
Q ss_pred HHHHHhCCccEEEEEeccchHHH
Q 024042 113 KLLEKIGVERFSVVGTSYGGFVA 135 (273)
Q Consensus 113 ~~~~~~~~~~i~l~G~S~Gg~~a 135 (273)
-+..+++.+++.++|+-++..+.
T Consensus 165 ~LA~~lgA~~I~l~GfdF~~~~~ 187 (232)
T COG1634 165 FLAYYLGAEKIRLVGFDFGIPVT 187 (232)
T ss_pred HHHHHhCCCeEEEeeecCCcccc
Confidence 44567889999999999988664
No 375
>PF15566 Imm18: Immunity protein 18
Probab=24.56 E-value=1.2e+02 Score=16.51 Aligned_cols=31 Identities=19% Similarity=0.186 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHHhCCccEEEEEeccchHH
Q 024042 104 ELFQAASLGKLLEKIGVERFSVVGTSYGGFV 134 (273)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~ 134 (273)
.....+.+..+......+.++++--||||.-
T Consensus 4 L~~L~~~l~~L~~~~~~~H~Hlmtp~WgG~E 34 (52)
T PF15566_consen 4 LELLQDQLENLQEKEPFDHEHLMTPDWGGEE 34 (52)
T ss_pred HHHHHHHHHHHHhccCCCCceeccccccccc
Confidence 3445566666666655678999999999953
No 376
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=24.50 E-value=1.3e+02 Score=22.78 Aligned_cols=18 Identities=39% Similarity=0.525 Sum_probs=16.1
Q ss_pred EEEEeccchHHHHHHHHh
Q 024042 124 SVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 124 ~l~G~S~Gg~~a~~~a~~ 141 (273)
.+.|-|.||.+|..++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 578999999999999876
No 377
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=24.28 E-value=1.6e+02 Score=17.19 Aligned_cols=31 Identities=29% Similarity=0.551 Sum_probs=16.0
Q ss_pred cEEEEEeccchHHHHHHHHhCCcccceEEEecCC
Q 024042 122 RFSVVGTSYGGFVAYHMARMWPERVEKVVIASSG 155 (273)
Q Consensus 122 ~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~ 155 (273)
+++++| ||.+++.+|......-..+.++...
T Consensus 1 ~vvViG---gG~ig~E~A~~l~~~g~~vtli~~~ 31 (80)
T PF00070_consen 1 RVVVIG---GGFIGIELAEALAELGKEVTLIERS 31 (80)
T ss_dssp EEEEES---SSHHHHHHHHHHHHTTSEEEEEESS
T ss_pred CEEEEC---cCHHHHHHHHHHHHhCcEEEEEecc
Confidence 466777 4555555555443333445555443
No 378
>PF13709 DUF4159: Domain of unknown function (DUF4159)
Probab=24.16 E-value=2.9e+02 Score=20.23 Aligned_cols=36 Identities=14% Similarity=0.180 Sum_probs=30.7
Q ss_pred cEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCC
Q 024042 213 DVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENT 249 (273)
Q Consensus 213 p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (273)
|++.+.|..+...+.+..+.+.+.+ .+.-++.++..
T Consensus 55 P~ly~~g~~~~~~s~~e~~~Lr~Yl-~~GGfl~~D~~ 90 (207)
T PF13709_consen 55 PFLYWPGHGDFPLSDEEIANLRRYL-ENGGFLLFDDR 90 (207)
T ss_pred CEEEEeCCCCCCCCHHHHHHHHHHH-HcCCEEEEECC
Confidence 9999999999988888999999988 66677777655
No 379
>PRK03363 fixB putative electron transfer flavoprotein FixB; Provisional
Probab=23.98 E-value=3.7e+02 Score=21.35 Aligned_cols=53 Identities=11% Similarity=0.060 Sum_probs=36.7
Q ss_pred CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEeccch-HHHHHHHHhC
Q 024042 82 FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTSYGG-FVAYHMARMW 142 (273)
Q Consensus 82 ~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg-~~a~~~a~~~ 142 (273)
-.|+..|.+. ..+..+.+++.+.++++..+...++|+|+|.-| -++-++|.+.
T Consensus 50 d~V~~~~~~~--------~~~~~e~~~~al~~~i~~~~p~~~vl~~~T~~Gr~laprlAa~l 103 (313)
T PRK03363 50 NHVWKLSGKP--------DDRMIEDYAGVMADTIRQHGADGLVLLPNTRRGKLLAAKLGYRL 103 (313)
T ss_pred CEEEEecCcc--------cccChHHHHHHHHHHHHhhCCCcEEEEcCCccHHHHHHHHHHHh
Confidence 4677776541 125667788888888887664468899887644 6777777764
No 380
>COG0288 CynT Carbonic anhydrase [Inorganic ion transport and metabolism]
Probab=23.49 E-value=1e+02 Score=22.62 Aligned_cols=36 Identities=22% Similarity=0.146 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHhCCccEEEEEeccchHHHHHHHH
Q 024042 105 LFQAASLGKLLEKIGVERFSVVGTSYGGFVAYHMAR 140 (273)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~ 140 (273)
......+...++.++.+.|+++||+-=|.+...+..
T Consensus 76 ~~~l~sleyAv~~L~v~~IiV~GH~~CGav~aa~~~ 111 (207)
T COG0288 76 GSVLRSLEYAVYVLGVKEIIVCGHTDCGAVKAALDD 111 (207)
T ss_pred cchhHHHHHHHHHcCCCEEEEecCCCcHHHHhcccc
Confidence 445667778888999999999999976666555443
No 381
>PF01012 ETF: Electron transfer flavoprotein domain; InterPro: IPR014730 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems. They can be functionally classified into constitutive, "housekeeping" ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II) []. ETFs are heterodimeric proteins composed of an alpha and beta subunit, and contain an FAD cofactor and AMP [, , , , ]. ETF consists of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain III is formed by the beta subunit. Domains I and III share an almost identical alpha-beta-alpha sandwich fold, while domain II forms an alpha-beta-alpha sandwich similar to that of bacterial flavodoxins. FAD is bound in a cleft between domains II and III, while domain III binds the AMP molecule. Interactions between domains I and III stabilise the protein, forming a shallow bowl where domain II resides. This entry represents the N-terminal domain of both the alpha and beta subunits from Group I and Group II ETFs.; PDB: 1EFP_B 3FET_B 3IH5_B 2A1T_S 1EFV_B 1T9G_S 2A1U_B 1O96_E 1O94_C 3CLU_C ....
Probab=23.22 E-value=2.6e+02 Score=19.27 Aligned_cols=60 Identities=20% Similarity=0.174 Sum_probs=38.9
Q ss_pred HHhhc-CC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhCCccEEEEEec-cchHHHHHHHHhC
Q 024042 75 VQFFA-PH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIGVERFSVVGTS-YGGFVAYHMARMW 142 (273)
Q Consensus 75 ~~~l~-~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S-~Gg~~a~~~a~~~ 142 (273)
...+. .+ -+|+.++.+. ...++.+.+++.+.++++..+.+ ++++|++ .|..++..+|.+.
T Consensus 51 ~~~l~~~G~d~v~~~~~~~-------~~~~~~~~~a~~l~~~~~~~~~~-lVl~~~t~~g~~la~~lA~~L 113 (164)
T PF01012_consen 51 RKALAKYGADKVYHIDDPA-------LAEYDPEAYADALAELIKEEGPD-LVLFGSTSFGRDLAPRLAARL 113 (164)
T ss_dssp HHHHHSTTESEEEEEE-GG-------GTTC-HHHHHHHHHHHHHHHT-S-EEEEESSHHHHHHHHHHHHHH
T ss_pred hhhhhhcCCcEEEEecCcc-------ccccCHHHHHHHHHHHHHhcCCC-EEEEcCcCCCCcHHHHHHHHh
Confidence 34455 34 5788887652 22346777888999999987644 7777765 5557777777764
No 382
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=23.16 E-value=1.1e+02 Score=24.86 Aligned_cols=18 Identities=33% Similarity=0.314 Sum_probs=16.1
Q ss_pred EEEEeccchHHHHHHHHh
Q 024042 124 SVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 124 ~l~G~S~Gg~~a~~~a~~ 141 (273)
.++|-|.|+.+|..++..
T Consensus 47 ~IaGtSAGALvAAl~asG 64 (382)
T cd07219 47 RVAGTSAGSVIAALVVCG 64 (382)
T ss_pred eEEEEcHHHHHHHHHHhC
Confidence 589999999999988875
No 383
>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants. Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.
Probab=22.94 E-value=56 Score=26.20 Aligned_cols=18 Identities=28% Similarity=0.508 Sum_probs=16.1
Q ss_pred EEEEeccchHHHHHHHHh
Q 024042 124 SVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 124 ~l~G~S~Gg~~a~~~a~~ 141 (273)
.+.|-|.||.+|..++..
T Consensus 46 liaGTStGgiiA~~la~~ 63 (349)
T cd07214 46 VIAGTSTGGLITAMLTAP 63 (349)
T ss_pred EEeeCCHHHHHHHHHhcC
Confidence 578999999999999874
No 384
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=22.92 E-value=4.1e+02 Score=22.77 Aligned_cols=70 Identities=9% Similarity=0.066 Sum_probs=45.2
Q ss_pred CCCCeEEEEcCCCCch-hHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHH-HHHHHHHHHhCC-ccEEEEE
Q 024042 52 LKKPSLVLIHGFGPEA-IWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQA-ASLGKLLEKIGV-ERFSVVG 127 (273)
Q Consensus 52 ~~~~~vi~~hG~~~~~-~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~-~~~~~~~~~~~~-~~i~l~G 127 (273)
.+.|+||++-|+-+++ ......+...|... ++|.++..|. .++.. ..+-.+-+++.. +.|.++=
T Consensus 37 ~~~~vlIv~eG~DaaGKg~~I~~l~~~ldprg~~v~~~~~P~------------~eE~~~~flwRfw~~lP~~G~I~IFd 104 (493)
T TIGR03708 37 AGFPVIILIEGWDGAGKGETINLLNEWMDPRGIETHAFGRPS------------DEERERPPMWRFWRRLPPKGKIGIFF 104 (493)
T ss_pred cCCeEEEEEeCCCCCChHHHHHHHHHHhCcCccEEEeCCCCC------------HHHhcCcHHHHHHHhCCCCCeEEEEc
Confidence 4678999999986655 35677888888887 9999988762 11211 223444455533 5677776
Q ss_pred eccchH
Q 024042 128 TSYGGF 133 (273)
Q Consensus 128 ~S~Gg~ 133 (273)
-|+=+-
T Consensus 105 RSWY~~ 110 (493)
T TIGR03708 105 GSWYTR 110 (493)
T ss_pred Ccccch
Confidence 665443
No 385
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=22.84 E-value=1.1e+02 Score=23.59 Aligned_cols=32 Identities=9% Similarity=0.205 Sum_probs=17.9
Q ss_pred eEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeec
Q 024042 56 SLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPD 88 (273)
Q Consensus 56 ~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d 88 (273)
.||++|....+. .....+++.|.++ |.++.++
T Consensus 232 ~IILmHd~~~T~-~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 232 AMVLMHPTASST-EGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred cEEEEcCCccHH-HHHHHHHHHHHHCCCEEEeHH
Confidence 466666544444 4555566666555 6665543
No 386
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.75 E-value=1.7e+02 Score=22.92 Aligned_cols=34 Identities=21% Similarity=0.131 Sum_probs=25.1
Q ss_pred HHHHHHHHHHhC----CccEEEEEec--cchHHHHHHHHh
Q 024042 108 AASLGKLLEKIG----VERFSVVGTS--YGGFVAYHMARM 141 (273)
Q Consensus 108 ~~~~~~~~~~~~----~~~i~l~G~S--~Gg~~a~~~a~~ 141 (273)
+..+.+++++.+ .+++.++|.| +|.-+|.++...
T Consensus 142 p~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~ 181 (296)
T PRK14188 142 PLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAA 181 (296)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhC
Confidence 455677777764 3789999966 788888888754
No 387
>KOG0736 consensus Peroxisome assembly factor 2 containing the AAA+-type ATPase domain [Posttranslational modification, protein turnover, chaperones]
Probab=22.69 E-value=6.2e+02 Score=23.42 Aligned_cols=74 Identities=18% Similarity=0.057 Sum_probs=45.8
Q ss_pred CeEEeecC-----CCCCCCCCCCccccHHHHHHHHHHHHHHhC---CccEEEEEeccchHHHHHHHHhCCcccceEEEec
Q 024042 82 FNVYVPDL-----IFFGHSTTRSIQRTELFQAASLGKLLEKIG---VERFSVVGTSYGGFVAYHMARMWPERVEKVVIAS 153 (273)
Q Consensus 82 ~~v~~~d~-----~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~ 153 (273)
--|+.+|= |..|.|.. ...-++..+..+.+-++.+. .++++++|-+-=--+.=- |...|.|+++++.++
T Consensus 765 PCVIFFDELDSlAP~RG~sGD--SGGVMDRVVSQLLAELDgls~~~s~~VFViGATNRPDLLDp-ALLRPGRFDKLvyvG 841 (953)
T KOG0736|consen 765 PCVIFFDELDSLAPNRGRSGD--SGGVMDRVVSQLLAELDGLSDSSSQDVFVIGATNRPDLLDP-ALLRPGRFDKLVYVG 841 (953)
T ss_pred CeEEEeccccccCccCCCCCC--ccccHHHHHHHHHHHhhcccCCCCCceEEEecCCCccccCh-hhcCCCccceeEEec
Confidence 44666662 34444432 22366777787877777764 367999987654333222 233588999999998
Q ss_pred CCCCC
Q 024042 154 SGVNM 158 (273)
Q Consensus 154 ~~~~~ 158 (273)
+.-..
T Consensus 842 ~~~d~ 846 (953)
T KOG0736|consen 842 PNEDA 846 (953)
T ss_pred CCccH
Confidence 76543
No 388
>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.54 E-value=2.8e+02 Score=21.72 Aligned_cols=45 Identities=22% Similarity=0.303 Sum_probs=29.9
Q ss_pred HHHHHHHHHHhCC----ccEEEEEecc--chHHHHHHHHhCCcccceEEEec
Q 024042 108 AASLGKLLEKIGV----ERFSVVGTSY--GGFVAYHMARMWPERVEKVVIAS 153 (273)
Q Consensus 108 ~~~~~~~~~~~~~----~~i~l~G~S~--Gg~~a~~~a~~~~~~v~~~v~~~ 153 (273)
+..+.+++++++. ++++++|.|. |=-+++++..+.++ +.+-|.++
T Consensus 137 p~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~-~~AtVtvc 187 (287)
T PRK14181 137 PAGIIELLKYYEIPLHGRHVAIVGRSNIVGKPLAALLMQKHPD-TNATVTLL 187 (287)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHhCcCC-CCCEEEEe
Confidence 4556677776643 7899999994 77778777766443 34555544
No 389
>PF14488 DUF4434: Domain of unknown function (DUF4434)
Probab=22.51 E-value=2.8e+02 Score=19.44 Aligned_cols=53 Identities=11% Similarity=0.154 Sum_probs=35.5
Q ss_pred HhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCcc-------ccHHHHHHHHHHHHHHhCCc
Q 024042 69 WQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQ-------RTELFQAASLGKLLEKIGVE 121 (273)
Q Consensus 69 ~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 121 (273)
..|+.....+.+- .+.+++-.-|++....-+.. ....+.++.+.+..++.|.+
T Consensus 20 ~~W~~~~~~m~~~GidtlIlq~~~~~~~~~yps~~~~~~~~~~~~d~l~~~L~~A~~~Gmk 80 (166)
T PF14488_consen 20 AQWREEFRAMKAIGIDTLILQWTGYGGFAFYPSKLSPGGFYMPPVDLLEMILDAADKYGMK 80 (166)
T ss_pred HHHHHHHHHHHHcCCcEEEEEEeecCCcccCCccccCccccCCcccHHHHHHHHHHHcCCE
Confidence 7799999888876 88887777777665422221 13445667777777777765
No 390
>PRK10867 signal recognition particle protein; Provisional
Probab=22.23 E-value=4.8e+02 Score=21.95 Aligned_cols=14 Identities=21% Similarity=0.128 Sum_probs=11.3
Q ss_pred CCeEEeecCCCCCC
Q 024042 81 HFNVYVPDLIFFGH 94 (273)
Q Consensus 81 ~~~v~~~d~~g~g~ 94 (273)
+|.++.+|.+|...
T Consensus 183 ~~DvVIIDTaGrl~ 196 (433)
T PRK10867 183 GYDVVIVDTAGRLH 196 (433)
T ss_pred CCCEEEEeCCCCcc
Confidence 49999999998653
No 391
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=22.10 E-value=78 Score=26.21 Aligned_cols=37 Identities=16% Similarity=0.202 Sum_probs=23.2
Q ss_pred cEEEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCc
Q 024042 213 DVLIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVP 253 (273)
Q Consensus 213 p~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 253 (273)
.+++.+|+.|+....... +........+++++++|+.
T Consensus 378 nviFtNG~~DPW~~lgv~----~~~~~~~~~~~I~g~~Hc~ 414 (434)
T PF05577_consen 378 NVIFTNGELDPWRALGVT----SDSSDSVPAIVIPGGAHCS 414 (434)
T ss_dssp SEEEEEETT-CCGGGS------S-SSSSEEEEEETT--TTG
T ss_pred eEEeeCCCCCCcccccCC----CCCCCCcccEEECCCeeec
Confidence 899999999998655422 2233456667899999974
No 392
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=21.95 E-value=3.8e+02 Score=20.68 Aligned_cols=67 Identities=15% Similarity=0.104 Sum_probs=35.4
Q ss_pred hcCCCeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhC------CccEEEEEeccchHHHHHHHHhCC--cccceE
Q 024042 78 FAPHFNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIG------VERFSVVGTSYGGFVAYHMARMWP--ERVEKV 149 (273)
Q Consensus 78 l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~------~~~i~l~G~S~Gg~~a~~~a~~~~--~~v~~~ 149 (273)
..++|.++.+|.+|.... .....+.+..+.+... ...++++--+.-|.-++..+..+- -.+.++
T Consensus 151 ~~~~~D~ViIDT~G~~~~--------d~~~~~el~~~~~~~~~~~~~~~~~~~LVl~a~~~~~~~~~~~~f~~~~~~~g~ 222 (272)
T TIGR00064 151 KARNIDVVLIDTAGRLQN--------KVNLMDELKKIKRVIKKVDKDAPDEVLLVLDATTGQNALEQAKVFNEAVGLTGI 222 (272)
T ss_pred HHCCCCEEEEeCCCCCcc--------hHHHHHHHHHHHHHHhcccCCCCceEEEEEECCCCHHHHHHHHHHHhhCCCCEE
Confidence 345599999999987542 2233444444444333 344555544444544444444332 236676
Q ss_pred EEe
Q 024042 150 VIA 152 (273)
Q Consensus 150 v~~ 152 (273)
|+-
T Consensus 223 IlT 225 (272)
T TIGR00064 223 ILT 225 (272)
T ss_pred EEE
Confidence 664
No 393
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=21.83 E-value=2.7e+02 Score=21.68 Aligned_cols=48 Identities=31% Similarity=0.427 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHhCC---ccEEEEEeccchHHHHHHHHhCCcccceEEEe
Q 024042 104 ELFQAASLGKLLEKIGV---ERFSVVGTSYGGFVAYHMARMWPERVEKVVIA 152 (273)
Q Consensus 104 ~~~~~~~~~~~~~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~ 152 (273)
.+.+...+..++++++. .++-=+|..+|+. +..+|.++..+|-|+-+.
T Consensus 54 ~eAQ~~k~~~~~~kl~L~~G~~lLDiGCGWG~l-~~~aA~~y~v~V~GvTlS 104 (283)
T COG2230 54 EEAQRAKLDLILEKLGLKPGMTLLDIGCGWGGL-AIYAAEEYGVTVVGVTLS 104 (283)
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEeCCChhHH-HHHHHHHcCCEEEEeeCC
Confidence 34456667777788765 3455589998875 556667765566666553
No 394
>PRK10437 carbonic anhydrase; Provisional
Probab=21.76 E-value=1.7e+02 Score=21.78 Aligned_cols=32 Identities=16% Similarity=0.109 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHhCCccEEEEEeccchHHHHHH
Q 024042 107 QAASLGKLLEKIGVERFSVVGTSYGGFVAYHM 138 (273)
Q Consensus 107 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~ 138 (273)
....+...+..++.+.|+++||+-=|.+...+
T Consensus 77 ~~~~leyAV~~L~v~~IvV~GHt~CG~V~Aal 108 (220)
T PRK10437 77 CLSVVQYAVDVLEVEHIIICGHYGCGGVQAAV 108 (220)
T ss_pred hHHHHHHHHHHcCCCEEEEeCCCCchHHHHHH
Confidence 35556677788899999999999766665544
No 395
>cd03378 beta_CA_cladeC Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=21.70 E-value=1.9e+02 Score=20.05 Aligned_cols=29 Identities=34% Similarity=0.354 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHhCCccEEEEEeccchHHH
Q 024042 107 QAASLGKLLEKIGVERFSVVGTSYGGFVA 135 (273)
Q Consensus 107 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a 135 (273)
....+...+..++.+.++++|||-=|.+.
T Consensus 78 ~~~sl~yav~~l~v~~IvV~GHt~CG~~~ 106 (154)
T cd03378 78 VLGSLEYAVEVLGVPLVVVLGHESCGAVA 106 (154)
T ss_pred HHHHHHHHHHHhCCCEEEEEcCCCccHHH
Confidence 45667777888899999999999844443
No 396
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=21.44 E-value=3.3e+02 Score=22.07 Aligned_cols=60 Identities=12% Similarity=0.051 Sum_probs=31.8
Q ss_pred CCCeEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeecCCCCCCCCCCCccccHHHHHHHHHHHHHHhC
Q 024042 53 KKPSLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPDLIFFGHSTTRSIQRTELFQAASLGKLLEKIG 119 (273)
Q Consensus 53 ~~~~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~ 119 (273)
...+|+.+.|.-.|+ - .+..|.++ |.|+.+.+..+... ............|...+.+.++
T Consensus 3 ~~kV~v~mSGGVDSS-V----aA~lLk~QGyeViGl~m~~~~~~--~~~~C~s~~d~~da~~va~~LG 63 (356)
T COG0482 3 KKKVLVGMSGGVDSS-V----AAYLLKEQGYEVIGLFMKNWDED--GGGGCCSEEDLRDAERVADQLG 63 (356)
T ss_pred CcEEEEEccCCHHHH-H----HHHHHHHcCCeEEEEEEEeeccC--CCCcCCchhHHHHHHHHHHHhC
Confidence 345777787755444 1 23334444 99999988866641 1111233333444445454444
No 397
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=21.43 E-value=91 Score=32.75 Aligned_cols=30 Identities=27% Similarity=0.311 Sum_probs=23.7
Q ss_pred HHHHHHHhCCccEEEEEeccchHHHHHHHH
Q 024042 111 LGKLLEKIGVERFSVVGTSYGGFVAYHMAR 140 (273)
Q Consensus 111 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~ 140 (273)
+..+++..+.++-.++|||+|=+.|+.++.
T Consensus 664 l~~lL~~~Gi~Pd~v~GHSlGE~aAa~aAG 693 (2582)
T TIGR02813 664 QYKLFTQAGFKADMTAGHSFGELSALCAAG 693 (2582)
T ss_pred HHHHHHHcCCccceeecCCHHHHHHHHHhC
Confidence 345566778888899999999988877663
No 398
>COG3675 Predicted lipase [Lipid metabolism]
Probab=21.36 E-value=64 Score=24.97 Aligned_cols=41 Identities=32% Similarity=0.511 Sum_probs=27.4
Q ss_pred HHHHHHHHhCC-ccEEEEEeccchHHHHHHHH----hCCcccceEEE
Q 024042 110 SLGKLLEKIGV-ERFSVVGTSYGGFVAYHMAR----MWPERVEKVVI 151 (273)
Q Consensus 110 ~~~~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~----~~~~~v~~~v~ 151 (273)
....+++.+.. -++.++|||.|+.++...+. +.| .++.+++
T Consensus 163 q~~~lleeiP~~Yrig~tghS~g~aii~vrGtyfe~k~p-~vdnlv~ 208 (332)
T COG3675 163 QEQTLLEEIPQGYRIGITGHSSGGAIICVRGTYFERKYP-RVDNLVV 208 (332)
T ss_pred HHHHHHHhcccceEEEEEeecCCccEEEEeccchhcccC-Cccccee
Confidence 45556666655 56899999999988765554 333 3555554
No 399
>cd07215 Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipase of bacteria. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=21.21 E-value=63 Score=25.60 Aligned_cols=17 Identities=35% Similarity=0.421 Sum_probs=14.5
Q ss_pred EEEEeccchHHHHHHHH
Q 024042 124 SVVGTSYGGFVAYHMAR 140 (273)
Q Consensus 124 ~l~G~S~Gg~~a~~~a~ 140 (273)
.+.|-|.||.+|+.++.
T Consensus 43 li~GTStGgiia~~l~~ 59 (329)
T cd07215 43 LVAGTSTGGILTCLYLC 59 (329)
T ss_pred eeeccCHHHHHHHHHhC
Confidence 57899999999988763
No 400
>PRK07053 glutamine amidotransferase; Provisional
Probab=21.11 E-value=3.6e+02 Score=20.18 Aligned_cols=31 Identities=16% Similarity=0.105 Sum_probs=19.7
Q ss_pred HHHHHHHHHhCCccEEEEEeccchHHHHHHH
Q 024042 109 ASLGKLLEKIGVERFSVVGTSYGGFVAYHMA 139 (273)
Q Consensus 109 ~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a 139 (273)
....++++..-...+-++|.|+|..+...+.
T Consensus 70 ~~~~~~i~~~~~~~~PvlGIC~G~Qlla~al 100 (234)
T PRK07053 70 APEIALLRQRLAAGLPTLGICLGAQLIARAL 100 (234)
T ss_pred HHHHHHHHHHHHCCCCEEEECccHHHHHHHc
Confidence 3444545443223456999999998877665
No 401
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=21.07 E-value=4.9e+02 Score=21.69 Aligned_cols=99 Identities=13% Similarity=0.010 Sum_probs=53.8
Q ss_pred CCeEEEEcCCCCchhHhHHHHHHhhcCCCeEEeecCCCCCCCCCCC------ccccHHHHHHHHHHHHHHhCCccEEEEE
Q 024042 54 KPSLVLIHGFGPEAIWQWRKQVQFFAPHFNVYVPDLIFFGHSTTRS------IQRTELFQAASLGKLLEKIGVERFSVVG 127 (273)
Q Consensus 54 ~~~vi~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~------~~~~~~~~~~~~~~~~~~~~~~~i~l~G 127 (273)
...++++.-..+.....|........+++-|+-.|..++-..-... ...+++.+.+++......-.....+|.|
T Consensus 48 ~~~villSd~~G~~d~~~s~a~al~~~~Alv~~vd~~~ylaaL~~dd~ecvylisd~Ealsr~~Qr~a~~g~yr~PVl~g 127 (456)
T COG3946 48 QGLVILLSDEAGIGDQERSRADALLARGALVAPVDLGAYLAALGADDNECVYLISDFEALSREAQRAADLGVYRLPVLTG 127 (456)
T ss_pred ceeeEEEEcccChhhhhcchhHHHhhcCCeeeccccchhhhccccCCCcceEEehhHHHHhHHHHHHhhccCcccceEee
Confidence 3455555543333313333333333444888888877653222111 1234555555554444333335567889
Q ss_pred eccchHHHHHHHHhCCcc-cceEEEe
Q 024042 128 TSYGGFVAYHMARMWPER-VEKVVIA 152 (273)
Q Consensus 128 ~S~Gg~~a~~~a~~~~~~-v~~~v~~ 152 (273)
---||.+++..+.+-|+. +.+.+-.
T Consensus 128 ~g~Gg~~A~asaaqSp~atlag~Vsl 153 (456)
T COG3946 128 PGQGGTLAYASAAQSPDATLAGAVSL 153 (456)
T ss_pred cCCCcHHHHHHHhhChhhhhcCccCC
Confidence 999999999988876542 3444433
No 402
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=20.83 E-value=51 Score=27.42 Aligned_cols=52 Identities=17% Similarity=0.166 Sum_probs=31.3
Q ss_pred EEEecCCCCCCChHHHHHHHHHhcCCcEEEEeCCCCCCcCcCChhhHHHHHHHHhcc
Q 024042 215 LIVWGDQDQIFPLKMATELKELLGKKARLEIIENTSHVPQIENPGLFNSIVKNFLRG 271 (273)
Q Consensus 215 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 271 (273)
-++.|..|..|+.+.++... + .......++ +.|..++.++ ++.+.|.+||+.
T Consensus 370 ~~~y~dGDGTV~~~S~~~~~--~-~~~~~~~l~-~~H~~il~n~-~v~~~I~~fL~~ 421 (440)
T PLN02733 370 EYTYVDGDGTVPVESAKADG--L-NAVARVGVP-GDHRGILRDE-HVFRILKHWLKV 421 (440)
T ss_pred eEEEeCCCCEEecchhhccC--c-cccccccCC-chHHHHhcCH-HHHHHHHHHHhc
Confidence 44555566666665544221 2 233445556 8898877755 667888888853
No 403
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=20.65 E-value=1e+02 Score=21.90 Aligned_cols=31 Identities=6% Similarity=0.164 Sum_probs=15.9
Q ss_pred eEEEEcCCC---CchhHhHHHHHHhhcCC-CeEEee
Q 024042 56 SLVLIHGFG---PEAIWQWRKQVQFFAPH-FNVYVP 87 (273)
Q Consensus 56 ~vi~~hG~~---~~~~~~~~~~~~~l~~~-~~v~~~ 87 (273)
.||++|... .+. .....+++.|.++ |+++.+
T Consensus 153 ~Iil~Hd~~~~~~t~-~~l~~~i~~l~~~Gy~~vtl 187 (191)
T TIGR02764 153 DIILLHASDSAKQTV-KALPTIIKKLKEKGYEFVTI 187 (191)
T ss_pred CEEEEeCCCCcHhHH-HHHHHHHHHHHHCCCEEEEH
Confidence 477777311 122 3445555665554 666655
No 404
>cd03131 GATase1_HTS Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). HTS, the first enzyme in methionine biosynthesis in Escherichia coli, transfers a succinyl group from succinyl-CoA to homoserine forming succinyl homoserine. It has been suggested that the succinyl group of succinyl-CoA is initially transferred to an enzyme nucleophile before subsequent transfer to homoserine. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with GATase1 domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. It has been proposed that this cys is in the active site of the molecule. However, as succinyl has been found bound to a conserved lysine residue, this conserved cys may play a role in dimer formation. HTS acti
Probab=20.64 E-value=43 Score=23.74 Aligned_cols=33 Identities=12% Similarity=0.045 Sum_probs=22.2
Q ss_pred HHHHHHHHHhCCccEEEEEeccchHHHHHHHHh
Q 024042 109 ASLGKLLEKIGVERFSVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 109 ~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~ 141 (273)
+.+.++++.....-.-.+|-|||++.|+.++.-
T Consensus 85 ~El~~i~dwa~~~v~stl~iCWgaqaal~~~yG 117 (175)
T cd03131 85 EELTEILDWAKTHVTSTLFSCWAAMAALYYFYG 117 (175)
T ss_pred HHHHHHHHHHHHhCcchHHHHHHHHHHHHHHcC
Confidence 334455544433345688999999999988754
No 405
>PF07931 CPT: Chloramphenicol phosphotransferase-like protein; InterPro: IPR012853 The members of this family are all similar to chloramphenicol 3-O phosphotransferase (CPT, Q56148 from SWISSPROT) expressed by Streptomyces venezuelae. Chloramphenicol (Cm) is a metabolite produced by this bacterium that can inhibit ribosomal peptidyl transferase activity and therefore protein production. By transferring a phosphate group to the C-3 hydroxyl group of Cm, CPT inactivates this potentially lethal metabolite [, ]. ; GO: 0005524 ATP binding, 0016740 transferase activity; PDB: 1QHX_A 1QHN_A 1GRR_A 1QHY_A 1QHS_A 1GRQ_A.
Probab=20.51 E-value=1.1e+02 Score=21.64 Aligned_cols=33 Identities=12% Similarity=0.172 Sum_probs=19.9
Q ss_pred eEEEEcCCCCchhHhHHHHHHhhcCC-CeEEeec
Q 024042 56 SLVLIHGFGPEAIWQWRKQVQFFAPH-FNVYVPD 88 (273)
Q Consensus 56 ~vi~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d 88 (273)
-||+++|.+++.+......++..... |-.+.+|
T Consensus 2 ~iI~LNG~sSSGKSsia~~Lq~~~~~p~~~l~~D 35 (174)
T PF07931_consen 2 QIIILNGPSSSGKSSIARALQERLPEPWLHLSVD 35 (174)
T ss_dssp -EEEEEE-TTSSHHHHHHHHHHHSSS-EEEEEHH
T ss_pred eEEEEeCCCCCCHHHHHHHHHHhCcCCeEEEecC
Confidence 38999998777755555444433344 6667666
No 406
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=20.48 E-value=51 Score=22.59 Aligned_cols=12 Identities=33% Similarity=0.581 Sum_probs=10.7
Q ss_pred EEEEEeccchHH
Q 024042 123 FSVVGTSYGGFV 134 (273)
Q Consensus 123 i~l~G~S~Gg~~ 134 (273)
.+++|.|.|+++
T Consensus 70 ~vi~G~SAGA~i 81 (154)
T PF03575_consen 70 GVIIGTSAGAMI 81 (154)
T ss_dssp SEEEEETHHHHC
T ss_pred CEEEEEChHHhh
Confidence 689999999977
No 407
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=20.45 E-value=1e+02 Score=23.65 Aligned_cols=27 Identities=26% Similarity=0.274 Sum_probs=20.6
Q ss_pred EEEEeccchHHHHHHHHhCCcccceEE
Q 024042 124 SVVGTSYGGFVAYHMARMWPERVEKVV 150 (273)
Q Consensus 124 ~l~G~S~Gg~~a~~~a~~~~~~v~~~v 150 (273)
.++|.|+|+.-+..+..+.+.+-++++
T Consensus 43 ~~~GvSAGA~n~~aYls~Q~gra~~~~ 69 (292)
T COG4667 43 LVVGVSAGALNLVAYLSKQRGRARRVI 69 (292)
T ss_pred eeeeecHhHHhHHHHhhcCCchHHHHH
Confidence 578999999999888887766544433
No 408
>PRK13512 coenzyme A disulfide reductase; Provisional
Probab=20.26 E-value=3.5e+02 Score=22.57 Aligned_cols=44 Identities=16% Similarity=0.302 Sum_probs=26.5
Q ss_pred HHHHHHHHHHhCCccEEEEEeccchHHHHHHHHhCCcccceEEEecC
Q 024042 108 AASLGKLLEKIGVERFSVVGTSYGGFVAYHMARMWPERVEKVVIASS 154 (273)
Q Consensus 108 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~ 154 (273)
++.+.+.+.....++++++| ||.+++.+|......-..+.++..
T Consensus 136 ~~~l~~~l~~~~~~~vvViG---gG~ig~E~A~~l~~~g~~Vtli~~ 179 (438)
T PRK13512 136 TDAIDQFIKANQVDKALVVG---AGYISLEVLENLYERGLHPTLIHR 179 (438)
T ss_pred HHHHHHHHhhcCCCEEEEEC---CCHHHHHHHHHHHhCCCcEEEEec
Confidence 34444444444457899999 678888887654333334555543
No 409
>PRK15219 carbonic anhydrase; Provisional
Probab=20.25 E-value=1.7e+02 Score=22.17 Aligned_cols=32 Identities=19% Similarity=0.116 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHhCCccEEEEEeccchHHHHHH
Q 024042 107 QAASLGKLLEKIGVERFSVVGTSYGGFVAYHM 138 (273)
Q Consensus 107 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~ 138 (273)
....+...+..++.+.|+++|||-=|.+...+
T Consensus 129 ~~~slEyAv~~L~v~~IvVlGHt~CGav~Aa~ 160 (245)
T PRK15219 129 LLGSMEFACAVAGAKVVLVMGHTACGAVKGAI 160 (245)
T ss_pred hhhHHHHHHHHcCCCEEEEecCCcchHHHHHH
Confidence 34567777888999999999999766655444
No 410
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=20.21 E-value=1e+02 Score=24.55 Aligned_cols=18 Identities=28% Similarity=0.375 Sum_probs=14.7
Q ss_pred EEEEeccchHHHHHHHHh
Q 024042 124 SVVGTSYGGFVAYHMARM 141 (273)
Q Consensus 124 ~l~G~S~Gg~~a~~~a~~ 141 (273)
.++|||+|=+.|+.++..
T Consensus 127 ~~~GHSlGE~aA~~~AG~ 144 (343)
T PLN02752 127 VCAGLSLGEYTALVFAGA 144 (343)
T ss_pred eeeeccHHHHHHHHHhCC
Confidence 579999999888877643
No 411
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.16 E-value=2e+02 Score=22.40 Aligned_cols=34 Identities=21% Similarity=0.323 Sum_probs=23.2
Q ss_pred HHHHHHHHHHhCC----ccEEEEEec--cchHHHHHHHHh
Q 024042 108 AASLGKLLEKIGV----ERFSVVGTS--YGGFVAYHMARM 141 (273)
Q Consensus 108 ~~~~~~~~~~~~~----~~i~l~G~S--~Gg~~a~~~a~~ 141 (273)
...+.+++++++. +++.++|.| .|--+|..+..+
T Consensus 141 p~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~ 180 (285)
T PRK14191 141 PMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNA 180 (285)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC
Confidence 4556777777643 789999999 455566555543
No 412
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.00 E-value=2e+02 Score=22.38 Aligned_cols=34 Identities=26% Similarity=0.348 Sum_probs=24.2
Q ss_pred HHHHHHHHHHhCC----ccEEEEEecc--chHHHHHHHHh
Q 024042 108 AASLGKLLEKIGV----ERFSVVGTSY--GGFVAYHMARM 141 (273)
Q Consensus 108 ~~~~~~~~~~~~~----~~i~l~G~S~--Gg~~a~~~a~~ 141 (273)
...+.+++++++. +++.++|.|. |--++.++..+
T Consensus 143 p~av~~ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~ 182 (285)
T PRK10792 143 PRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLELLLA 182 (285)
T ss_pred HHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHC
Confidence 4556677777643 7899999997 66677666644
Done!