BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024046
(273 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1KYW|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYW|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYW|F Chain F, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYZ|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
pdb|1KYZ|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
pdb|1KYZ|E Chain E, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
Length = 365
Score = 275 bits (703), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 133/243 (54%), Positives = 173/243 (71%), Gaps = 8/243 (3%)
Query: 28 AMQLAMGVVLPMATQAAIQLGVFEIIAKAG---ELSAPEIAAQLQAQNVKAPMMLDRMLR 84
AMQLA VLPM ++A++L + EIIAKAG ++S EIA+QL N AP+MLDRMLR
Sbjct: 23 AMQLASASVLPMILKSALELDLLEIIAKAGPGAQISPIEIASQLPTTNPDAPVMLDRMLR 82
Query: 85 LLVSHRVLECSVSGGE-----RLYALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWLG 139
LL + +L CSV + RLY L V+KY V N+DG S+ + DKV MESW
Sbjct: 83 LLACYIILTCSVRTQQDGKVQRLYGLATVAKYLVKNEDGVSISALNLMNQDKVLMESWYH 142
Query: 140 LKDAVMEGGIPFNRVHGMHIFEYASGNPRFNETYHEAMFNHSTIAMERILEHYEGFQNVE 199
LKDAV++GGIPFN+ +GM FEY +PRFN+ +++ M +HSTI M++ILE Y GF+ ++
Sbjct: 143 LKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYTGFEGLK 202
Query: 200 RLVDVGGGFGVTLSMITSKYPQIKAVNFDLPHVVQDAPSYAGVEHVGGNMFESVPEGDAI 259
LVDVGGG G ++ I SKYP IK +NFDLPHV++DAPSY GVEHVGG+MF S+P+ DA+
Sbjct: 203 SLVDVGGGTGAVINTIVSKYPTIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSIPKADAV 262
Query: 260 LMK 262
MK
Sbjct: 263 FMK 265
>pdb|3REO|A Chain A, Monolignol O-Methyltransferase (Momt)
pdb|3REO|B Chain B, Monolignol O-Methyltransferase (Momt)
pdb|3REO|C Chain C, Monolignol O-Methyltransferase (Momt)
pdb|3REO|D Chain D, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|A Chain A, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|B Chain B, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|C Chain C, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|D Chain D, Monolignol O-Methyltransferase (Momt)
Length = 368
Score = 270 bits (689), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 132/244 (54%), Positives = 177/244 (72%), Gaps = 9/244 (3%)
Query: 28 AMQLAMGVVLPMATQAAIQLGVFEIIAKA----GELSAPEIAAQLQAQNVKAPMMLDRML 83
AMQLA VLPMA +AAI+L V EI+AK+ G +S EIAAQL N +AP+MLDR+L
Sbjct: 25 AMQLASAAVLPMALKAAIELDVLEIMAKSVPPSGYISPAEIAAQLPTTNPEAPVMLDRVL 84
Query: 84 RLLVSHRVLECSV----SGG-ERLYALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWL 138
RLL S+ V+ ++ SG ERLY L PV K+ N+DG SL F+ L DKV +E W
Sbjct: 85 RLLASYSVVTYTLRELPSGKVERLYGLAPVCKFLTKNEDGVSLAPFLLLATDKVLLEPWF 144
Query: 139 GLKDAVMEGGIPFNRVHGMHIFEYASGNPRFNETYHEAMFNHSTIAMERILEHYEGFQNV 198
LKDA++EGGIPFN+ +GM+IF+Y + R N+ +++ M ++STI M++ILE Y GF+ +
Sbjct: 145 YLKDAILEGGIPFNKAYGMNIFDYHGTDHRINKVFNKGMSSNSTITMKKILEMYNGFEGL 204
Query: 199 ERLVDVGGGFGVTLSMITSKYPQIKAVNFDLPHVVQDAPSYAGVEHVGGNMFESVPEGDA 258
+VDVGGG G SMI +KYP I A+NFDLPHV+QDAP+++GVEH+GG+MF+ VP+GDA
Sbjct: 205 TTIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQDAPAFSGVEHLGGDMFDGVPKGDA 264
Query: 259 ILMK 262
I +K
Sbjct: 265 IFIK 268
>pdb|3P9C|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Bound To
Sah
pdb|3P9I|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9K|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
Length = 364
Score = 248 bits (633), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 124/243 (51%), Positives = 162/243 (66%), Gaps = 8/243 (3%)
Query: 28 AMQLAMGVVLPMATQAAIQLGVFEIIAKAG--ELSAPEIAAQL-QAQNVKAPMMLDRMLR 84
A+QLA VLPM + AI+LG+ EI+ AG L+ E+AA+L A N +AP M+DR+LR
Sbjct: 24 ALQLASSSVLPMTLKNAIELGLLEILVAAGGKSLTPTEVAAKLPSAANPEAPDMVDRILR 83
Query: 85 LLVSHRVLECSVSGGE-----RLYALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWLG 139
LL S+ V+ C V G+ R Y PV K+ N+DG S+ + DKV MESW
Sbjct: 84 LLASYNVVTCLVEEGKDGRLSRSYGAAPVCKFLTPNEDGVSMAALALMNQDKVLMESWYY 143
Query: 140 LKDAVMEGGIPFNRVHGMHIFEYASGNPRFNETYHEAMFNHSTIAMERILEHYEGFQNVE 199
LKDAV++GGIPFN+ +GM FEY +PRFN ++E M NHS I +++LE Y GF+ +
Sbjct: 144 LKDAVLDGGIPFNKAYGMSAFEYHGTDPRFNRVFNEGMKNHSIIITKKLLELYHGFEGLG 203
Query: 200 RLVDVGGGFGVTLSMITSKYPQIKAVNFDLPHVVQDAPSYAGVEHVGGNMFESVPEGDAI 259
LVDVGGG G T++ I + YP IK VNFDLPHV+ +AP + GV HVGG+MF+ VP GD I
Sbjct: 204 TLVDVGGGVGATVAAIAAHYPTIKGVNFDLPHVISEAPQFPGVTHVGGDMFKEVPSGDTI 263
Query: 260 LMK 262
LMK
Sbjct: 264 LMK 266
>pdb|1FP1|D Chain D, Crystal Structure Analysis Of Chalcone O-Methyltransferase
Length = 372
Score = 194 bits (494), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 104/247 (42%), Positives = 149/247 (60%), Gaps = 12/247 (4%)
Query: 28 AMQLAMGVVLPMATQAAIQLGVFEIIAKAGE----LSAPEIAAQLQA--QNVKAPMMLDR 81
AM L +V P AAI L +FEIIAKA +S EIA++L A Q+ P LDR
Sbjct: 28 AMVLTTNLVYPAVLNAAIDLNLFEIIAKATPPGAFMSPSEIASKLPASTQHSDLPNRLDR 87
Query: 82 MLRLLVSHRVLECSVS-----GGERLYALNPVSKYFVSNKDGASLGHFMALPLDKVFMES 136
MLRLL S+ VL + G ER+Y L+ V KY V ++ L F ++
Sbjct: 88 MLRLLASYSVLTSTTRTIEDGGAERVYGLSMVGKYLVPDESRGYLASFTTFLCYPALLQV 147
Query: 137 WLGLKDAVMEGGIP-FNRVHGMHIFEYASGNPRFNETYHEAMFNHSTIAMERILEHYEGF 195
W+ K+AV++ I F VHG+ +E+ + + N+ ++++M + M+R+LE Y GF
Sbjct: 148 WMNFKEAVVDEDIDLFKNVHGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRMLEIYTGF 207
Query: 196 QNVERLVDVGGGFGVTLSMITSKYPQIKAVNFDLPHVVQDAPSYAGVEHVGGNMFESVPE 255
+ + LVDVGGG G L +I SKYP IK +NFDLP V+++AP +G+EHVGG+MF SVP+
Sbjct: 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDMFASVPQ 267
Query: 256 GDAILMK 262
GDA+++K
Sbjct: 268 GDAMILK 274
>pdb|1FPQ|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
Chalcone O- Methyltransferase
Length = 372
Score = 164 bits (415), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 100/247 (40%), Positives = 142/247 (57%), Gaps = 12/247 (4%)
Query: 28 AMQLAMGVVLPMATQAAIQLGVFEIIAKA---GELSAP-EIAAQLQA--QNVKAPMMLDR 81
A L +V P AAI L +FEIIAKA G +P EIA++L A Q+ P LDR
Sbjct: 28 AXVLTTNLVYPAVLNAAIDLNLFEIIAKATPPGAFXSPSEIASKLPASTQHSDLPNRLDR 87
Query: 82 MLRLLVSHRVLECSVS-----GGERLYALNPVSKYFVSNKDGASLGHFMALPLDKVFMES 136
LRLL S+ VL + G ER+Y L+ V KY V ++ L F ++
Sbjct: 88 XLRLLASYSVLTSTTRTIEDGGAERVYGLSXVGKYLVPDESRGYLASFTTFLCYPALLQV 147
Query: 137 WLGLKDAVMEGGIP-FNRVHGMHIFEYASGNPRFNETYHEAMFNHSTIAMERILEHYEGF 195
W K+AV++ I F VHG+ +E+ + + N+ ++++ + +R LE Y GF
Sbjct: 148 WXNFKEAVVDEDIDLFKNVHGVTKYEFXGKDKKXNQIFNKSXVDVCATEXKRXLEIYTGF 207
Query: 196 QNVERLVDVGGGFGVTLSMITSKYPQIKAVNFDLPHVVQDAPSYAGVEHVGGNMFESVPE 255
+ + LVDVGGG G L +I SKYP IK +NFDLP V+++AP +G+EHVGG+ F SVP+
Sbjct: 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDXFASVPQ 267
Query: 256 GDAILMK 262
GDA ++K
Sbjct: 268 GDAXILK 274
>pdb|1FP2|A Chain A, Crystal Structure Analysis Of Isoflavone
O-Methyltransferase
Length = 352
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 113/226 (50%), Gaps = 5/226 (2%)
Query: 39 MATQAAIQLGVFEIIAKAGE-LSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSVS 97
M+ + A+++ + II G+ +S + + LQ + K + R++R L + E ++
Sbjct: 31 MSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGNV-RRLMRYLAHNGFFEI-IT 88
Query: 98 GGERLYALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWLGLKDAVMEGGIP-FNRVHG 156
E YAL S+ V D L + LD S+ LK + E + F G
Sbjct: 89 KEEESYALTVASELLVRGSD-LCLAPMVECVLDPTLSGSYHELKKWIYEEDLTLFGVTLG 147
Query: 157 MHIFEYASGNPRFNETYHEAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMIT 216
+++ NP +N ++++AM + S + + + F +E +VDVGGG G T +I
Sbjct: 148 SGFWDFLDKNPEYNTSFNDAMASDSKLINLALRDCDFVFDGLESIVDVGGGTGTTAKIIC 207
Query: 217 SKYPQIKAVNFDLPHVVQDAPSYAGVEHVGGNMFESVPEGDAILMK 262
+P++K + FD P VV++ + +VGG+MF S+P DA+L+K
Sbjct: 208 ETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNADAVLLK 253
>pdb|2QYO|A Chain A, Crystal Structure Of Isoflavone O-Methyltransferase
Homolog In Complex With Biochanin A And Sah
pdb|2QYO|B Chain B, Crystal Structure Of Isoflavone O-Methyltransferase
Homolog In Complex With Biochanin A And Sah
Length = 357
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 115/230 (50%), Gaps = 8/230 (3%)
Query: 39 MATQAAIQLGVFEIIAKAGE-LSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLEC--- 94
M+ + +I++ + II G+ ++ + + LQ + K + R++R L + E
Sbjct: 31 MSLKWSIEMNIPNIIHNHGKPITLSNLVSILQIPSTKVDN-VQRLMRYLAHNGFFEIITN 89
Query: 95 -SVSGGERLYALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWLGLKDAVMEGGIPFNR 153
+ E YAL S+ V + L + LD S+ LK V E +
Sbjct: 90 QELENEEEAYALTVASELLVKGTE-LCLAPMVECVLDPTLSTSFHNLKKWVYEEDLTLFA 148
Query: 154 VH-GMHIFEYASGNPRFNETYHEAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTL 212
V+ G ++E+ + NP +N Y++A+ + S + + + F+ +E +VDVGGG G T
Sbjct: 149 VNLGCDLWEFLNKNPEYNTLYNDALASDSKMINLAMKDCNLVFEGLESIVDVGGGNGTTG 208
Query: 213 SMITSKYPQIKAVNFDLPHVVQDAPSYAGVEHVGGNMFESVPEGDAILMK 262
+I +P++ V FD P VV++ + +VGG+MF SVP+ DA+L+K
Sbjct: 209 KIICETFPKLTCVVFDRPKVVENLCGSNNLTYVGGDMFISVPKADAVLLK 258
>pdb|1FPX|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
Isoflavone O-Methyltransferase
Length = 352
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 107/223 (47%), Gaps = 5/223 (2%)
Query: 42 QAAIQLGVFEIIAKAGE-LSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSVSGGE 100
+ A++ + II G+ +S + + LQ + K + R+ R L + E ++ E
Sbjct: 34 KWAVEXNIPNIIQNHGKPISLSNLVSILQVPSSKIGNV-RRLXRYLAHNGFFEI-ITKEE 91
Query: 101 RLYALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWLGLKDAVMEGGIP-FNRVHGMHI 159
YAL S+ V D L + LD S+ LK + E + F G
Sbjct: 92 ESYALTVASELLVRGSD-LCLAPXVECVLDPTLSGSYHELKKWIYEEDLTLFGVTLGSGF 150
Query: 160 FEYASGNPRFNETYHEAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITSKY 219
+++ NP +N ++++A + S + + + F +E +VDVGGG G T +I +
Sbjct: 151 WDFLDKNPEYNTSFNDAXASDSKLINLALRDCDFVFDGLESIVDVGGGTGTTAKIICETF 210
Query: 220 PQIKAVNFDLPHVVQDAPSYAGVEHVGGNMFESVPEGDAILMK 262
P++K + FD P VV++ + +VGG+ F S+P DA+L+K
Sbjct: 211 PKLKCIVFDRPQVVENLSGSNNLTYVGGDXFTSIPNADAVLLK 253
>pdb|1ZGJ|A Chain A, Crystal Structure Of Isoflavanone 4'-O-Methyltransferase
Complexed With (+)-Pisatin
Length = 354
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 116/255 (45%), Gaps = 28/255 (10%)
Query: 27 HAMQLAMGVVLPMATQAAIQLGVFEIIAKAGE-LSAPEIAAQLQAQNVKAPMMLDRMLRL 85
H + V MA ++A++LG+ + I G+ ++ E+A+ L+ K + L R LRL
Sbjct: 9 HLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKVNI-LHRFLRL 67
Query: 86 LVSHRVLECSVSGGERL-------YALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWL 138
L + ++ G+ Y+L P SK +S K L + L ++ W
Sbjct: 68 LTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGK-PTCLSSIVKGALHPSSLDMWS 126
Query: 139 GLKDAVMEGGIPFNRVHGMHIFEYASGNPRFN------ETYHEAMFNHSTIAMERIL--- 189
K FN +FE A+G ++ E+ +MF + + R+
Sbjct: 127 SSKKW-------FNEDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRMFKLV 179
Query: 190 --EHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAVNFDLPHVVQDAPSYAGVEHVGG 247
E+ F+ +E LVDVGGG G +I +P +K FD P VV + + VGG
Sbjct: 180 LQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGG 239
Query: 248 NMFESVPEGDAILMK 262
+MF+S+P DA+L+K
Sbjct: 240 DMFKSIPSADAVLLK 254
>pdb|1ZG3|A Chain A, Crystal Structure Of The Isoflavanone
4'-O-Methyltransferase Complexed With Sah And
2,7,4'-Trihydroxyisoflavanone
Length = 358
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 116/255 (45%), Gaps = 28/255 (10%)
Query: 27 HAMQLAMGVVLPMATQAAIQLGVFEIIAKAGE-LSAPEIAAQLQAQNVKAPMMLDRMLRL 85
H + V MA ++A++LG+ + I G+ ++ E+A+ L+ K + L R LRL
Sbjct: 13 HLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKVNI-LHRFLRL 71
Query: 86 LVSHRVLECSVSGGERL-------YALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWL 138
L + ++ G+ Y+L P SK +S K L + L ++ W
Sbjct: 72 LTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGK-PTCLSSIVKGALHPSSLDMWS 130
Query: 139 GLKDAVMEGGIPFNRVHGMHIFEYASGNPRFN------ETYHEAMFNHSTIAMERIL--- 189
K FN +FE A+G ++ E+ +MF + + R+
Sbjct: 131 SSKKW-------FNEDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRMFKLV 183
Query: 190 --EHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAVNFDLPHVVQDAPSYAGVEHVGG 247
E+ F+ +E LVDVGGG G +I +P +K FD P VV + + VGG
Sbjct: 184 LQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGG 243
Query: 248 NMFESVPEGDAILMK 262
+MF+S+P DA+L+K
Sbjct: 244 DMFKSIPSADAVLLK 258
>pdb|1ZGA|A Chain A, Crystal Structure Of Isoflavanone 4'-o-methyltransferase
Complexed With (+)-6a-hydroxymaackiain
pdb|1ZHF|A Chain A, Crystal Structure Of Selenomethionine Substituted
Isoflavanone 4'-O- Methyltransferase
Length = 357
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 116/255 (45%), Gaps = 28/255 (10%)
Query: 27 HAMQLAMGVVLPMATQAAIQLGVFEIIAKAGE-LSAPEIAAQLQAQNVKAPMMLDRMLRL 85
H + V MA ++A++LG+ + I G+ ++ E+A+ L+ K + L R LRL
Sbjct: 12 HLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKVNI-LHRFLRL 70
Query: 86 LVSHRVLECSVSGGERL-------YALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWL 138
L + ++ G+ Y+L P SK +S K L + L ++ W
Sbjct: 71 LTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGK-PTCLSSIVKGALHPSSLDMWS 129
Query: 139 GLKDAVMEGGIPFNRVHGMHIFEYASGNPRFN------ETYHEAMFNHSTIAMERIL--- 189
K FN +FE A+G ++ E+ +MF + + R+
Sbjct: 130 SSKKW-------FNEDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRMFKLV 182
Query: 190 --EHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAVNFDLPHVVQDAPSYAGVEHVGG 247
E+ F+ +E LVDVGGG G +I +P +K FD P VV + + VGG
Sbjct: 183 LQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGG 242
Query: 248 NMFESVPEGDAILMK 262
+MF+S+P DA+L+K
Sbjct: 243 DMFKSIPSADAVLLK 257
>pdb|4A6D|A Chain A, Crystal Structure Of Human N-Acetylserotonin
Methyltransferase (Asmt) In Complex With Sam
pdb|4A6E|A Chain A, Crystal Structure Of Human N-Acetylserotonin
Methyltransferase (Asmt) In Complex With Sam And
N-Acetylserotonin
Length = 353
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 108/249 (43%), Gaps = 28/249 (11%)
Query: 32 AMGVVLPMATQAAIQLGVFEIIAKA-GELSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHR 90
A G ++ AA +LGVF+++A+A G L +AA ++A ++LD + VS +
Sbjct: 16 ANGFMVSQVLFAACELGVFDLLAEAPGPLDVAAVAAGVRASAHGTELLLD----ICVSLK 71
Query: 91 VLECSVSGGERLYALNPVSKYF---VSNKDGASLGHFMALPLDKVFMESWLGLKDAVMEG 147
+L+ GG+ Y +S + VS S+ +M + W L DAV EG
Sbjct: 72 LLKVETRGGKAFYRNTELSSDYLTTVSPTSQCSMLKYMG----RTSYRCWGHLADAVREG 127
Query: 148 GIPFNRVHGMHIFE-----YASGNPRFNETYHEAMFNHSTIAMERILEHYEGFQNVERLV 202
+ G+ E Y S R + +A+ ++ +L ++ +
Sbjct: 128 RNQYLETFGVPAEELFTAIYRSEGERLQ--FMQALQEVWSVNGRSVLTAFD-LSVFPLMC 184
Query: 203 DVGGGFGVTLSMITSKYPQIKAVNFDLPHVVQDAP---SYAGVEHVG---GNMFES-VPE 255
D+GGG G S YP K FD+P VV A S+ E + G+ F+ +PE
Sbjct: 185 DLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLPE 244
Query: 256 GDA-ILMKV 263
D IL +V
Sbjct: 245 ADLYILARV 253
>pdb|3GWZ|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GXO|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
Length = 369
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 75/175 (42%), Gaps = 14/175 (8%)
Query: 98 GGERLYALNPVSKYFVSNKDG--ASLGHFMALPLDKVFMESWLGLKDAVMEGGIPFNRVH 155
G + L+A N +S + + A+ F A P +W L +V G F+ +
Sbjct: 105 GHDDLFAQNALSAVLLPDPASPVATDARFQAAPW---HWRAWEQLTHSVRTGEASFDVAN 161
Query: 156 GMHIFEYASGNPRFNETYHEAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMI 215
G ++ +P+ E ++ A + S ++ Y+ F VD+GGG G + +
Sbjct: 162 GTSFWQLTHEDPKARELFNRAXGSVSLTEAGQVAAAYD-FSGAATAVDIGGGRGSLXAAV 220
Query: 216 TSKYPQIKAVNFDLPHVVQDAPSYAG-------VEHVGGNMFESVPEG-DAILMK 262
+P ++ + P V ++A E + G+ FE++P+G D L+K
Sbjct: 221 LDAFPGLRGTLLERPPVAEEARELLTGRGLADRCEILPGDFFETIPDGADVYLIK 275
>pdb|1X19|A Chain A, Crystal Structure Of Bchu Involved In Bacteriochlorophyll
C Biosynthesis
pdb|1X1A|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Methionine
pdb|1X1B|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine
pdb|1X1C|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine And Zn2+
pdb|1X1D|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine And Zn-Bacteriopheophorbide D
Length = 359
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 106/259 (40%), Gaps = 51/259 (19%)
Query: 25 YSHAMQLAM-GVVLPMATQAAIQLGVFEIIAKAGELSAPEIAAQLQAQNVKAPMMLDRML 83
Y A +L G++ +AAI+L +F +A+ P+ A L A P L+ +L
Sbjct: 31 YHRANELVFKGLIEFSCMKAAIELDLFSHMAEG-----PKDLATLAADTGSVPPRLEMLL 85
Query: 84 RLLVSHRVLECSVSGGERLYALNPVSKYFVS------NKDGASLGHFMALPLDKVFMESW 137
L RV+ ++ G+ ++L + Y S N + MA D +M
Sbjct: 86 ETLRQMRVI--NLEDGK--WSLTEFADYMFSPTPKEPNLHQTPVAKAMAFLADDFYM--- 138
Query: 138 LGLKDAV-----MEGGIPF---NRVHGMHIFEYASGNPRFNETYHEAMFNHSTIAMERIL 189
GL AV +G +P+ R ++ E N +F A++ +L
Sbjct: 139 -GLSQAVRGQKNFKGQVPYPPVTREDNLYFEEIHRSNAKF--------------AIQLLL 183
Query: 190 EHYEGFQNVERLVDVGGGFGVTLSMITSKYPQIKAVNFDLPHVVQDAPSYAGVEHVGGNM 249
E + V++++DVGGG G + + +P++ + +LP + A + V M
Sbjct: 184 EEAK-LDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNLPGAIDLVNENAAEKGVADRM 242
Query: 250 F--------ESVPEGDAIL 260
ES PE DA+L
Sbjct: 243 RGIAVDIYKESYPEADAVL 261
>pdb|2IP2|A Chain A, Structure Of The Pyocyanin Biosynthetic Protein Phzm
pdb|2IP2|B Chain B, Structure Of The Pyocyanin Biosynthetic Protein Phzm
Length = 334
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 106/255 (41%), Gaps = 28/255 (10%)
Query: 29 MQLAMGVVLPMATQAAIQLGVFEIIAKAGELSAPEIAAQLQAQNVKAPMMLDRMLRLLVS 88
+Q+ G A +LG+ ++I ++G S +AA + + + + R++RLLV+
Sbjct: 13 IQVVTGEWKSRCVYVATRLGLADLI-ESGIDSDETLAAAVGSDAER----IHRLMRLLVA 67
Query: 89 HRVLECSVSGGERLYALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWLGLKDAVMEGG 148
+ + G YA P S + + + +G+ M L + F +W +A++ G
Sbjct: 68 FEIFQGDTRDG---YANTPTS-HLLRDVEGSF--RDMVLFYGEEFHAAWTPACEALLSGT 121
Query: 149 IPFNRVHGMHIFEYASGNPRFNETYHEAMFNHSTIAMERI--LEHYEGFQNVERLVDVGG 206
F G + Y P + AM S +A I L + G VDVGG
Sbjct: 122 PGFELAFGEDFYSYLKRCPDAGRRFLLAM-KASNLAFHEIPRLLDFRG----RSFVDVGG 176
Query: 207 GFGVTLSMITSKYPQIKAVNFDLP---HVVQDAPS--YAG--VEHVGGNMFESVPE-GDA 258
G G I P + V D V +D S AG V VGG+M + VP GD
Sbjct: 177 GSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQEVPSNGDI 236
Query: 259 ILMK--VGNFENYQS 271
L+ +G+ + S
Sbjct: 237 YLLSRIIGDLDEAAS 251
>pdb|1TW2|A Chain A, Crystal Structure Of Carminomycin-4-O-Methyltransferase
(Dnrk) In Complex With S-Adenosyl-L-Homocystein (Sah)
And 4-Methoxy-E-Rhodomycin T (M-Et)
pdb|1TW2|B Chain B, Crystal Structure Of Carminomycin-4-O-Methyltransferase
(Dnrk) In Complex With S-Adenosyl-L-Homocystein (Sah)
And 4-Methoxy-E-Rhodomycin T (M-Et)
pdb|1TW3|A Chain A, Crystal Structure Of Carminomycin-4-o-methyltransferase
(dnrk) In Complex With S-adenosyl-l-homocystein (sah)
And 4-methoxy-e-rhodomycin T (m-et)
pdb|1TW3|B Chain B, Crystal Structure Of Carminomycin-4-o-methyltransferase
(dnrk) In Complex With S-adenosyl-l-homocystein (sah)
And 4-methoxy-e-rhodomycin T (m-et)
Length = 360
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 101/234 (43%), Gaps = 21/234 (8%)
Query: 38 PMATQAAIQLGVFE-IIAKAGELSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSV 96
PM + A L + + I+A A + A L A+ P L R++R LV+ +LE
Sbjct: 33 PMVVRTAATLRLVDHILAGARTVKA------LAARTDTRPEALLRLIRHLVAIGLLEEDA 86
Query: 97 SGGERLYALNPVSKYFVSNKDGASLG-HFMALPLDKVFMESWLGLKDAVMEGGIPFNRVH 155
G + V + + A H + + + + S+ L DA+ G + ++
Sbjct: 87 PGE---FVPTEVGELLADDHPAAQRAWHDLTQAVARADI-SFTRLPDAIRTGRPTYESIY 142
Query: 156 GMHIFEYASGNPRFNETYHEAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMI 215
G +E +G P ++ + +A + Y+ + NV ++DVGGG G + I
Sbjct: 143 GKPFYEDLAGRPDLRASFDSLLACDQDVAFDAPAAAYD-WTNVRHVLDVGGGKGGFAAAI 201
Query: 216 TSKYPQIKAVNFDLPHVVQDAPSYAG-------VEHVGGNMFESVP-EGDAILM 261
+ P + A ++ V A SY V+ V G+ FE +P + DAI++
Sbjct: 202 ARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPRKADAIIL 255
>pdb|1QZZ|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adensyl-L-Methionine (Sam)
pdb|1R00|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adensyl-L-Homocystein (Sah)
Length = 374
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 15/199 (7%)
Query: 35 VVLPMATQAAIQLGVFEIIAKAGELSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLEC 94
+V PMA + A L + + + L+ + A L + P L R++R L VLE
Sbjct: 27 LVTPMALRVAATLRLVDHL-----LAGADTLAGLADRTDTHPQALSRLVRHLTVVGVLE- 80
Query: 95 SVSGGERL-YALNPVSKYFVSNKDGASLGHFMALPLDKVFMESWL---GLKDAVMEGGIP 150
GGE+ L P ++ + DG L L+ + L GL D V G
Sbjct: 81 ---GGEKQGRPLRP-TRLGMLLADGHPAQQRAWLDLNGAVSHADLAFTGLLDVVRTGRPA 136
Query: 151 FNRVHGMHIFEYASGNPRFNETYHEAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGV 210
+ +G +E S + +++ M +A E + Y+ + V ++DVGGG G
Sbjct: 137 YAGRYGRPFWEDLSADVALADSFDALMSCDEDLAYEAPADAYD-WSAVRHVLDVGGGNGG 195
Query: 211 TLSMITSKYPQIKAVNFDL 229
L+ I + P ++ +L
Sbjct: 196 MLAAIALRAPHLRGTLVEL 214
>pdb|3MCZ|A Chain A, The Structure Of An O-Methyltransferase Family Protein
From Burkholderia Thailandensis.
pdb|3MCZ|B Chain B, The Structure Of An O-Methyltransferase Family Protein
From Burkholderia Thailandensis
Length = 352
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 8/75 (10%)
Query: 195 FQNVERLVDVGGGFGVTLSMITSKYPQIKAVNFDLPHVVQDAPSYAGVEHVGGNM--FES 252
F ++D+ GG G L+ + ++PQ+ +DLP A +GG + FE
Sbjct: 177 FARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDLPTTRDAARKTIHAHDLGGRVEFFEK 236
Query: 253 VPEGDAILMKVGNFE 267
L+ NFE
Sbjct: 237 N------LLDARNFE 245
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,866,265
Number of Sequences: 62578
Number of extensions: 326953
Number of successful extensions: 766
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 733
Number of HSP's gapped (non-prelim): 23
length of query: 273
length of database: 14,973,337
effective HSP length: 97
effective length of query: 176
effective length of database: 8,903,271
effective search space: 1566975696
effective search space used: 1566975696
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)