BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024049
(273 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255557729|ref|XP_002519894.1| transporter, putative [Ricinus communis]
gi|223540940|gb|EEF42498.1| transporter, putative [Ricinus communis]
Length = 507
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 203/272 (74%), Positives = 237/272 (87%)
Query: 1 MVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID 60
MVIAYKKSKF+K+ LAPIEDW DLWRP+L GRISM++SPREV+G+VLKYMGASYN+ +I+
Sbjct: 234 MVIAYKKSKFQKNKLAPIEDWADLWRPDLKGRISMIDSPREVVGAVLKYMGASYNAKDIE 293
Query: 61 LQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAV 120
L+V GGK +VQ+NLAL Q RLFDS HYLKAFG+GDVWVAVGWSSDVLP KRMSN+AV
Sbjct: 294 LEVHGGKSAVQENLALFGKQVRLFDSMHYLKAFGVGDVWVAVGWSSDVLPVAKRMSNIAV 353
Query: 121 VVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIP 180
VVPKSG+SLWADLWAIPAASRL T +IGGRVRGPSPLIHQWIEFCLQ ARA+PFKQEVIP
Sbjct: 354 VVPKSGSSLWADLWAIPAASRLATNRIGGRVRGPSPLIHQWIEFCLQAARAMPFKQEVIP 413
Query: 181 GASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLV 240
GASPSALE+T V++PEEL +GKP DTNLI GVPP EIL+RCEFLEPLS+A L DY+WL+
Sbjct: 414 GASPSALESTPVEVPEELTRGKPRLDTNLIAGVPPPEILSRCEFLEPLSDAQLLDYKWLI 473
Query: 241 ADLQKPAPVLMKRVQHYLSSLIQSFLAKATLK 272
A +Q+P P L+ R+ Y+SSL++S K+ K
Sbjct: 474 ASMQQPGPNLIHRIHPYISSLVRSVGRKSDSK 505
>gi|224074577|ref|XP_002304393.1| predicted protein [Populus trichocarpa]
gi|222841825|gb|EEE79372.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 203/268 (75%), Positives = 231/268 (86%)
Query: 1 MVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID 60
MVIAYKKSKF++H LAPIEDW DLWRPELAGRISMV+SPREV+GSVLKYMGASYN+ NID
Sbjct: 151 MVIAYKKSKFQEHKLAPIEDWADLWRPELAGRISMVDSPREVVGSVLKYMGASYNTKNID 210
Query: 61 LQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAV 120
LQV GGK +VQQNLALL Q RLFDS +YLK F +GD WVAVGWSSDVLP KRMSNVAV
Sbjct: 211 LQVPGGKNAVQQNLALLGKQVRLFDSMYYLKTFSMGDAWVAVGWSSDVLPIAKRMSNVAV 270
Query: 121 VVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIP 180
VVPKSG SLWADLWAIPAA++LET QIGGR+RGPSPLIHQWIEFCLQ ARALPFKQEVIP
Sbjct: 271 VVPKSGTSLWADLWAIPAATKLETNQIGGRIRGPSPLIHQWIEFCLQAARALPFKQEVIP 330
Query: 181 GASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLV 240
GA+PSA+E +++++P+EL KGKP DTNLI GVPP EIL +CEFLEPL +ATLSDY+ L+
Sbjct: 331 GATPSAIENSVIEVPKELTKGKPKLDTNLIAGVPPPEILTKCEFLEPLPDATLSDYKLLI 390
Query: 241 ADLQKPAPVLMKRVQHYLSSLIQSFLAK 268
+Q P P L+ R+QHY+ S I +F K
Sbjct: 391 RTMQIPDPGLIHRIQHYILSTIHTFRLK 418
>gi|147822062|emb|CAN68081.1| hypothetical protein VITISV_021806 [Vitis vinifera]
Length = 875
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 198/273 (72%), Positives = 230/273 (84%), Gaps = 2/273 (0%)
Query: 1 MVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID 60
MVIAYKKSKF KH LAPIEDW DLWRPELAGRISM++SPREV+G+VLKYMGASYN++NI+
Sbjct: 603 MVIAYKKSKFEKHKLAPIEDWADLWRPELAGRISMIDSPREVVGAVLKYMGASYNTDNIE 662
Query: 61 LQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAV 120
LQV GG+ +VQQNL LLA Q R FDSTHY+KA +GDVWVAVGWSSDVLPA KRMSNVAV
Sbjct: 663 LQVNGGRNAVQQNLMLLAKQVRCFDSTHYIKALSVGDVWVAVGWSSDVLPAAKRMSNVAV 722
Query: 121 VVPKSGASLWADLWAIPAASRLE-TKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVI 179
+VPKSGASLWADLWAIP+ S+LE ++QIGGRVRGPSP+IHQWIEFCLQ ARA PF +EVI
Sbjct: 723 IVPKSGASLWADLWAIPSTSKLERSRQIGGRVRGPSPVIHQWIEFCLQAARAFPFTEEVI 782
Query: 180 PGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
PGASPSA+E V+ P EL KGKP +TNLI G+PP EILA CEFLEPLS+ATLSDY L
Sbjct: 783 PGASPSAIECASVEAPRELTKGKPKLETNLIAGMPPPEILAHCEFLEPLSDATLSDYRGL 842
Query: 240 VADLQKPAPVLMKRVQHYLSSLIQSFLAKATLK 272
+A +QKP+ L+ + Y+ SL + F ++ LK
Sbjct: 843 IAGIQKPSHGLIHGLHRYILSL-KEFFQQSYLK 874
>gi|449455671|ref|XP_004145575.1| PREDICTED: uncharacterized protein LOC101211357 [Cucumis sativus]
gi|449485058|ref|XP_004157059.1| PREDICTED: uncharacterized protein LOC101230567 [Cucumis sativus]
Length = 549
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 196/273 (71%), Positives = 234/273 (85%), Gaps = 2/273 (0%)
Query: 1 MVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID 60
MVIAY K KFRK+NLAP+EDW DLW PEL GRISMV+SPREVIG+VLKYMGASYN+ NI
Sbjct: 273 MVIAYNKVKFRKNNLAPMEDWSDLWCPELRGRISMVDSPREVIGAVLKYMGASYNTENIS 332
Query: 61 LQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAV 120
Q+ GG+ ++ QNL LLA Q RLFDS HYLKAF +GDVWVAVGWSSDVLP VKRMSN+AV
Sbjct: 333 SQIPGGRDAIHQNLTLLAKQVRLFDSAHYLKAFAVGDVWVAVGWSSDVLPVVKRMSNIAV 392
Query: 121 VVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIP 180
VVPKSG+SLWADLWAIPA SR+ET+ IGGRVRGPSPL HQWIEFCLQTARALPFKQEV+P
Sbjct: 393 VVPKSGSSLWADLWAIPATSRIETEPIGGRVRGPSPLFHQWIEFCLQTARALPFKQEVVP 452
Query: 181 GASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLV 240
GASP+A+E +V +P+EL +GKP DTNLI GVPP++IL +CEFL+PLS++TL+DY WL
Sbjct: 453 GASPAAIEGPVV-VPKELFEGKPKLDTNLIGGVPPSDILEKCEFLQPLSDSTLADYRWLA 511
Query: 241 ADLQKPAPVLMKRVQHYLSSLIQSFLAKATLKS 273
A++QKP LM RV +SSL++ F+++ +LK+
Sbjct: 512 ANMQKPEHRLMDRVHQAVSSLVR-FVSQISLKN 543
>gi|225427562|ref|XP_002266662.1| PREDICTED: uncharacterized protein LOC100242504 [Vitis vinifera]
gi|296085502|emb|CBI29234.3| unnamed protein product [Vitis vinifera]
Length = 553
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/273 (72%), Positives = 230/273 (84%), Gaps = 2/273 (0%)
Query: 1 MVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID 60
MVIAYKKSKF KH LAPIEDW DLWRPELAGRISM++SPREV+G+VLKYMGASYN++NI+
Sbjct: 281 MVIAYKKSKFEKHKLAPIEDWADLWRPELAGRISMIDSPREVVGAVLKYMGASYNTDNIE 340
Query: 61 LQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAV 120
LQV GG+ +VQQNL LLA Q R FDSTHY+KA +GDVWVAVGWSSDVLPA KRMSNVAV
Sbjct: 341 LQVNGGRNAVQQNLMLLAKQVRCFDSTHYIKALSVGDVWVAVGWSSDVLPAAKRMSNVAV 400
Query: 121 VVPKSGASLWADLWAIPAASRLE-TKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVI 179
+VPKSGASLWADLWAIP+ S+LE ++QIGGRVRGPSP+IHQWIEFCLQ ARA PF +EVI
Sbjct: 401 IVPKSGASLWADLWAIPSTSKLERSRQIGGRVRGPSPVIHQWIEFCLQAARAFPFTEEVI 460
Query: 180 PGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
PGASPSA+E V+ P EL KGKP +TNLI G+PP EILA CEFLEPLS+ATLSDY L
Sbjct: 461 PGASPSAIECASVEAPRELTKGKPKLETNLIAGMPPPEILAHCEFLEPLSDATLSDYRGL 520
Query: 240 VADLQKPAPVLMKRVQHYLSSLIQSFLAKATLK 272
+A +QKP+ L+ + Y+ SL + F ++ LK
Sbjct: 521 IAGIQKPSHGLIHGLHRYILSL-KEFFQQSYLK 552
>gi|357517389|ref|XP_003628983.1| RING-H2 finger protein ATL5F [Medicago truncatula]
gi|355523005|gb|AET03459.1| RING-H2 finger protein ATL5F [Medicago truncatula]
Length = 786
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 185/262 (70%), Positives = 223/262 (85%)
Query: 1 MVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID 60
MVIAYK + F+KH LAPIEDW DLWRP+LAGRISMV+SPREV+G+VLKYMGASYN+N+I+
Sbjct: 280 MVIAYKTNSFQKHKLAPIEDWADLWRPDLAGRISMVDSPREVVGAVLKYMGASYNANDIN 339
Query: 61 LQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAV 120
L+V GG+ +V+ NLALLA Q RLFDS +YLKAFG+GDVWVAVGWSSD++P KRMSNVAV
Sbjct: 340 LEVNGGRDAVKHNLALLAKQVRLFDSENYLKAFGVGDVWVAVGWSSDIIPVAKRMSNVAV 399
Query: 121 VVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIP 180
+VPKSGASLWADLWAIPAAS+++T +IGGRVRGPSPLIHQWIEFCLQ+ARALPFKQEVIP
Sbjct: 400 IVPKSGASLWADLWAIPAASKIQTSRIGGRVRGPSPLIHQWIEFCLQSARALPFKQEVIP 459
Query: 181 GASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLV 240
GASP L+ + EL KG+P TNLI G PP +IL RCEFLEPLS + +SDY WL+
Sbjct: 460 GASPPLLQGHSTNVALELTKGRPRLVTNLIDGAPPPDILERCEFLEPLSNSAVSDYHWLL 519
Query: 241 ADLQKPAPVLMKRVQHYLSSLI 262
A +Q+P L+ +++ Y+SSL+
Sbjct: 520 ASIQEPGNGLIHKMRQYISSLV 541
>gi|356559069|ref|XP_003547824.1| PREDICTED: uncharacterized protein LOC100781794 [Glycine max]
Length = 552
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 184/261 (70%), Positives = 223/261 (85%)
Query: 1 MVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID 60
MVIAYK +KF+KH LAP+EDW DLWRP+LAGRISMV+SPREVIG+VLKYMGASYN+N+I+
Sbjct: 280 MVIAYKTNKFQKHKLAPVEDWADLWRPDLAGRISMVDSPREVIGAVLKYMGASYNTNDIN 339
Query: 61 LQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAV 120
++V GG+ +V+ NLALLA Q RLFDS++YLKAFG+GDVWVAVGWSSD++PA KRMSNVAV
Sbjct: 340 MEVNGGRDAVKHNLALLAKQVRLFDSSNYLKAFGVGDVWVAVGWSSDIIPAAKRMSNVAV 399
Query: 121 VVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIP 180
VVPKSGASLWADLWAIPAASR++T +IGGR+RGPSPLIHQWIEFCLQ+ARALPFKQEVIP
Sbjct: 400 VVPKSGASLWADLWAIPAASRIQTNRIGGRIRGPSPLIHQWIEFCLQSARALPFKQEVIP 459
Query: 181 GASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLV 240
GASPS L+ +P EL KG P + NL+ G PP +IL +CEFLEPLS +TLSDY WL+
Sbjct: 460 GASPSHLQGHSANVPVELTKGGPRLNGNLVDGAPPPDILEKCEFLEPLSNSTLSDYHWLL 519
Query: 241 ADLQKPAPVLMKRVQHYLSSL 261
+Q+P L+ ++ + S+
Sbjct: 520 TSIQEPGHGLIHKMYQNIISV 540
>gi|356560607|ref|XP_003548582.1| PREDICTED: uncharacterized protein LOC100809061 [Glycine max]
Length = 508
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 181/263 (68%), Positives = 220/263 (83%)
Query: 1 MVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID 60
MVIAYK +KF+KH LAP+EDW DLWRP+LAGRI MV+SPREV+G+VLKYMGASYN+N+I+
Sbjct: 236 MVIAYKTNKFQKHKLAPVEDWADLWRPDLAGRILMVDSPREVVGAVLKYMGASYNTNDIN 295
Query: 61 LQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAV 120
+V GG+ V+ NLALLA Q RLFDS++YLKAFG+GD WVAVGWSSD++PA KRMSNVAV
Sbjct: 296 AEVNGGRDVVKHNLALLAKQVRLFDSSNYLKAFGVGDAWVAVGWSSDIIPAAKRMSNVAV 355
Query: 121 VVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIP 180
VVPKSG SLWADLWAIPAASR++T +IGGR+RGPSPLIHQWIEFCLQ+ARALPFKQEVIP
Sbjct: 356 VVPKSGVSLWADLWAIPAASRIQTNRIGGRIRGPSPLIHQWIEFCLQSARALPFKQEVIP 415
Query: 181 GASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLV 240
GASPS L+ +P EL KG P + NL+ G PP +IL RCEFLEPLS +TLSDY WL+
Sbjct: 416 GASPSHLQGHSANVPVELTKGGPRINGNLVDGAPPPDILERCEFLEPLSNSTLSDYHWLL 475
Query: 241 ADLQKPAPVLMKRVQHYLSSLIQ 263
+Q+P L+ ++ + S+++
Sbjct: 476 TSIQEPGHGLIHKMYQNIISVVK 498
>gi|28393765|gb|AAO42292.1| unknown protein [Arabidopsis thaliana]
Length = 524
Score = 368 bits (945), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 178/272 (65%), Positives = 219/272 (80%), Gaps = 4/272 (1%)
Query: 1 MVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID 60
MVIAYKKSKF+ + LAPIEDW DLWRPELAGRI+MVNSPREV+G+VLKYM ASYN+ ++D
Sbjct: 244 MVIAYKKSKFQNYKLAPIEDWADLWRPELAGRIAMVNSPREVVGAVLKYMRASYNTTDLD 303
Query: 61 LQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAV 120
QV GG+++V++NLA L Q RLFDS +YLKAF +GDVWV VGWSSDV+P KRMSNV V
Sbjct: 304 SQVPGGRLAVEENLASLMKQIRLFDSNNYLKAFNVGDVWVTVGWSSDVIPVAKRMSNVTV 363
Query: 121 VVPKSGASLWADLWAIPAASR--LETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEV 178
+VPKSGA+LWADLWAIPA S E +Q GGRVRGPSPLI+QWIEFCLQ AR+LPF +EV
Sbjct: 364 IVPKSGATLWADLWAIPAVSDSGKEAEQRGGRVRGPSPLINQWIEFCLQPARSLPFTREV 423
Query: 179 IPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEW 238
IPGASPSAL+ LV PE+ K + DTNL+ GVPP EIL++CEFLEPL EATLS+Y
Sbjct: 424 IPGASPSALDGPLVTEPEKTKKDRTKLDTNLVTGVPPPEILSKCEFLEPLPEATLSEYRL 483
Query: 239 LVADLQKPA--PVLMKRVQHYLSSLIQSFLAK 268
L+ ++K + P L+++++ +S ++ F AK
Sbjct: 484 LIETVRKQSQRPGLVEKLKDIVSIKVRGFRAK 515
>gi|297846532|ref|XP_002891147.1| hypothetical protein ARALYDRAFT_473635 [Arabidopsis lyrata subsp.
lyrata]
gi|297336989|gb|EFH67406.1| hypothetical protein ARALYDRAFT_473635 [Arabidopsis lyrata subsp.
lyrata]
Length = 522
Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 179/272 (65%), Positives = 218/272 (80%), Gaps = 4/272 (1%)
Query: 1 MVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID 60
MVIAYKKSKF+ + LAPIEDW DLWRPELAGRI+MVNSPREV+G+VLKYMGASYN+ ++D
Sbjct: 243 MVIAYKKSKFQNYKLAPIEDWADLWRPELAGRIAMVNSPREVVGAVLKYMGASYNTTDLD 302
Query: 61 LQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAV 120
QV GG+I+V++NLA L Q RLFDS +YLKAF +GDVWV VGWSSDV+P KRMSNV V
Sbjct: 303 SQVPGGRIAVEKNLASLMKQIRLFDSNNYLKAFNVGDVWVTVGWSSDVIPVAKRMSNVTV 362
Query: 121 VVPKSGASLWADLWAIPAASR--LETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEV 178
+VPKSGA+LWADLWAIPA S E +QIGGRVRGPSPLI+QWIEFCLQ AR+LPF +EV
Sbjct: 363 IVPKSGATLWADLWAIPAVSDSGKEAEQIGGRVRGPSPLINQWIEFCLQPARSLPFTREV 422
Query: 179 IPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEW 238
IPGASPSAL+ LV+ PE+ K + DTNL+ GVP EIL++CEFLEPL EATL +Y
Sbjct: 423 IPGASPSALDGPLVREPEKTKKDRTKLDTNLVTGVPLPEILSKCEFLEPLPEATLLEYRL 482
Query: 239 LVADLQKPAPV--LMKRVQHYLSSLIQSFLAK 268
L+ ++K + L+K++Q +S ++ F K
Sbjct: 483 LIETVRKQSQRHGLVKKIQDIVSIKVRGFRTK 514
>gi|30692516|ref|NP_174426.2| putrescine-binding periplasmic protein-like protein [Arabidopsis
thaliana]
gi|51536594|gb|AAU05535.1| At1g31410 [Arabidopsis thaliana]
gi|332193231|gb|AEE31352.1| putrescine-binding periplasmic protein-like protein [Arabidopsis
thaliana]
Length = 524
Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 178/272 (65%), Positives = 219/272 (80%), Gaps = 4/272 (1%)
Query: 1 MVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID 60
MVIAYKKSKF+ + LAPIEDW DLWRPELAGRI+MVNSPREV+G+VLKYM ASYN+ ++D
Sbjct: 244 MVIAYKKSKFQNYKLAPIEDWADLWRPELAGRIAMVNSPREVVGAVLKYMRASYNTTDLD 303
Query: 61 LQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAV 120
QV GG+++V++NLA L Q RLFDS +YLKAF +GDVWV VGWSSDV+P KRMSNV V
Sbjct: 304 SQVPGGRLAVEKNLASLMKQIRLFDSNNYLKAFNVGDVWVTVGWSSDVIPVAKRMSNVTV 363
Query: 121 VVPKSGASLWADLWAIPAASR--LETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEV 178
+VPKSGA+LWADLWAIPA S E +Q GGRVRGPSPLI+QWIEFCLQ AR+LPF +EV
Sbjct: 364 IVPKSGATLWADLWAIPAVSDSGKEAEQRGGRVRGPSPLINQWIEFCLQPARSLPFTREV 423
Query: 179 IPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEW 238
IPGASPSAL+ LV PE+ K + DTNL+ GVPP EIL++CEFLEPL EATLS+Y
Sbjct: 424 IPGASPSALDGPLVTEPEKTKKDRTKLDTNLVTGVPPPEILSKCEFLEPLPEATLSEYRL 483
Query: 239 LVADLQKPA--PVLMKRVQHYLSSLIQSFLAK 268
L+ ++K + P L+++++ +S ++ F AK
Sbjct: 484 LIETVRKQSQRPGLVEKLKDIVSIKVRGFRAK 515
>gi|12322546|gb|AAG51275.1|AC027135_16 hypothetical protein [Arabidopsis thaliana]
Length = 526
Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 178/272 (65%), Positives = 219/272 (80%), Gaps = 4/272 (1%)
Query: 1 MVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID 60
MVIAYKKSKF+ + LAPIEDW DLWRPELAGRI+MVNSPREV+G+VLKYM ASYN+ ++D
Sbjct: 246 MVIAYKKSKFQNYKLAPIEDWADLWRPELAGRIAMVNSPREVVGAVLKYMRASYNTTDLD 305
Query: 61 LQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAV 120
QV GG+++V++NLA L Q RLFDS +YLKAF +GDVWV VGWSSDV+P KRMSNV V
Sbjct: 306 SQVPGGRLAVEKNLASLMKQIRLFDSNNYLKAFNVGDVWVTVGWSSDVIPVAKRMSNVTV 365
Query: 121 VVPKSGASLWADLWAIPAASR--LETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEV 178
+VPKSGA+LWADLWAIPA S E +Q GGRVRGPSPLI+QWIEFCLQ AR+LPF +EV
Sbjct: 366 IVPKSGATLWADLWAIPAVSDSGKEAEQRGGRVRGPSPLINQWIEFCLQPARSLPFTREV 425
Query: 179 IPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEW 238
IPGASPSAL+ LV PE+ K + DTNL+ GVPP EIL++CEFLEPL EATLS+Y
Sbjct: 426 IPGASPSALDGPLVTEPEKTKKDRTKLDTNLVTGVPPPEILSKCEFLEPLPEATLSEYRL 485
Query: 239 LVADLQKPA--PVLMKRVQHYLSSLIQSFLAK 268
L+ ++K + P L+++++ +S ++ F AK
Sbjct: 486 LIETVRKQSQRPGLVEKLKDIVSIKVRGFRAK 517
>gi|115460340|ref|NP_001053770.1| Os04g0602200 [Oryza sativa Japonica Group]
gi|113565341|dbj|BAF15684.1| Os04g0602200, partial [Oryza sativa Japonica Group]
Length = 367
Score = 366 bits (939), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 165/263 (62%), Positives = 219/263 (83%)
Query: 1 MVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID 60
+VIAYKK+KF++HNL PI+DW DLWRPELAG+ISMV+SPREVIG+VLK++G+SYN+N+++
Sbjct: 100 VVIAYKKNKFKRHNLKPIQDWGDLWRPELAGKISMVDSPREVIGAVLKHLGSSYNTNDME 159
Query: 61 LQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAV 120
++ GG+ +V ++L L NQ +LFDST+YLK+FG+GDVWVAVGWSSDV+PA KRMS+VAV
Sbjct: 160 SEITGGRETVLESLTQLQNQVQLFDSTNYLKSFGVGDVWVAVGWSSDVIPAAKRMSDVAV 219
Query: 121 VVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIP 180
VVPKSG+SLWADLWAIP+A++ +T +IGGR RGPSPLI+QW +FCLQ+AR+LPF+Q+VIP
Sbjct: 220 VVPKSGSSLWADLWAIPSATKFQTDRIGGRTRGPSPLINQWFDFCLQSARSLPFRQDVIP 279
Query: 181 GASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLV 240
GASP LE + ++P+E K KP +TNL+ G PP EIL +CEFLEPLSE L DY+WL+
Sbjct: 280 GASPLFLEKPVPEVPQERNKRKPKLETNLVRGAPPLEILEKCEFLEPLSEKALDDYQWLI 339
Query: 241 ADLQKPAPVLMKRVQHYLSSLIQ 263
+Q+P L + +SS++
Sbjct: 340 TRMQRPNRGLFGNLLQNISSVLN 362
>gi|38344144|emb|CAE01823.2| OSJNBa0041A02.11 [Oryza sativa Japonica Group]
Length = 422
Score = 366 bits (939), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 165/263 (62%), Positives = 219/263 (83%)
Query: 1 MVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID 60
+VIAYKK+KF++HNL PI+DW DLWRPELAG+ISMV+SPREVIG+VLK++G+SYN+N+++
Sbjct: 155 VVIAYKKNKFKRHNLKPIQDWGDLWRPELAGKISMVDSPREVIGAVLKHLGSSYNTNDME 214
Query: 61 LQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAV 120
++ GG+ +V ++L L NQ +LFDST+YLK+FG+GDVWVAVGWSSDV+PA KRMS+VAV
Sbjct: 215 SEITGGRETVLESLTQLQNQVQLFDSTNYLKSFGVGDVWVAVGWSSDVIPAAKRMSDVAV 274
Query: 121 VVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIP 180
VVPKSG+SLWADLWAIP+A++ +T +IGGR RGPSPLI+QW +FCLQ+AR+LPF+Q+VIP
Sbjct: 275 VVPKSGSSLWADLWAIPSATKFQTDRIGGRTRGPSPLINQWFDFCLQSARSLPFRQDVIP 334
Query: 181 GASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLV 240
GASP LE + ++P+E K KP +TNL+ G PP EIL +CEFLEPLSE L DY+WL+
Sbjct: 335 GASPLFLEKPVPEVPQERNKRKPKLETNLVRGAPPLEILEKCEFLEPLSEKALDDYQWLI 394
Query: 241 ADLQKPAPVLMKRVQHYLSSLIQ 263
+Q+P L + +SS++
Sbjct: 395 TRMQRPNRGLFGNLLQNISSVLN 417
>gi|218195504|gb|EEC77931.1| hypothetical protein OsI_17268 [Oryza sativa Indica Group]
gi|222629488|gb|EEE61620.1| hypothetical protein OsJ_16044 [Oryza sativa Japonica Group]
Length = 537
Score = 364 bits (935), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 165/263 (62%), Positives = 219/263 (83%)
Query: 1 MVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID 60
+VIAYKK+KF++HNL PI+DW DLWRPELAG+ISMV+SPREVIG+VLK++G+SYN+N+++
Sbjct: 270 VVIAYKKNKFKRHNLKPIQDWGDLWRPELAGKISMVDSPREVIGAVLKHLGSSYNTNDME 329
Query: 61 LQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAV 120
++ GG+ +V ++L L NQ +LFDST+YLK+FG+GDVWVAVGWSSDV+PA KRMS+VAV
Sbjct: 330 SEITGGRETVLESLTQLQNQVQLFDSTNYLKSFGVGDVWVAVGWSSDVIPAAKRMSDVAV 389
Query: 121 VVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIP 180
VVPKSG+SLWADLWAIP+A++ +T +IGGR RGPSPLI+QW +FCLQ+AR+LPF+Q+VIP
Sbjct: 390 VVPKSGSSLWADLWAIPSATKFQTDRIGGRTRGPSPLINQWFDFCLQSARSLPFRQDVIP 449
Query: 181 GASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLV 240
GASP LE + ++P+E K KP +TNL+ G PP EIL +CEFLEPLSE L DY+WL+
Sbjct: 450 GASPLFLEKPVPEVPQERNKRKPKLETNLVRGAPPLEILEKCEFLEPLSEKALDDYQWLI 509
Query: 241 ADLQKPAPVLMKRVQHYLSSLIQ 263
+Q+P L + +SS++
Sbjct: 510 TRMQRPNRGLFGNLLQNISSVLN 532
>gi|116310926|emb|CAH67864.1| B0403H10-OSIGBa0105A11.16 [Oryza sativa Indica Group]
Length = 537
Score = 364 bits (935), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 165/263 (62%), Positives = 219/263 (83%)
Query: 1 MVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID 60
+VIAYKK+KF++HNL PI+DW DLWRPELAG+ISMV+SPREVIG+VLK++G+SYN+N+++
Sbjct: 270 VVIAYKKNKFKRHNLKPIQDWGDLWRPELAGKISMVDSPREVIGAVLKHLGSSYNTNDME 329
Query: 61 LQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAV 120
++ GG+ +V ++L L NQ +LFDST+YLK+FG+GDVWVAVGWSSDV+PA KRMS+VAV
Sbjct: 330 SEITGGRETVLESLTQLQNQVQLFDSTNYLKSFGVGDVWVAVGWSSDVIPAAKRMSDVAV 389
Query: 121 VVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIP 180
VVPKSG+SLWADLWAIP+A++ +T +IGGR RGPSPLI+QW +FCLQ+AR+LPF+Q+VIP
Sbjct: 390 VVPKSGSSLWADLWAIPSATKFQTDRIGGRTRGPSPLINQWFDFCLQSARSLPFRQDVIP 449
Query: 181 GASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLV 240
GASP LE + ++P+E K KP +TNL+ G PP EIL +CEFLEPLSE L DY+WL+
Sbjct: 450 GASPLFLEKPVPEVPQERNKRKPKLETNLVRGAPPLEILEKCEFLEPLSEKALDDYQWLI 509
Query: 241 ADLQKPAPVLMKRVQHYLSSLIQ 263
+Q+P L + +SS++
Sbjct: 510 TRMQRPNRGLFGNLLQNISSVLN 532
>gi|226510377|ref|NP_001146059.1| uncharacterized protein LOC100279590 [Zea mays]
gi|219885513|gb|ACL53131.1| unknown [Zea mays]
gi|413919418|gb|AFW59350.1| putative putrescine-binding domain family protein [Zea mays]
Length = 530
Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 165/262 (62%), Positives = 213/262 (81%)
Query: 1 MVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID 60
MVIAYKK KF++HNL PI+DW+DLWRPELAGRISMV+SPREVIG+VLK++G+SYN+ +++
Sbjct: 263 MVIAYKKDKFKRHNLKPIQDWEDLWRPELAGRISMVDSPREVIGAVLKHLGSSYNTVDME 322
Query: 61 LQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAV 120
+ V GG+ +V + L Q +LFDS +YLK+F +GDVWVAVGWSSDV+PA KRMSNVAV
Sbjct: 323 MDVNGGRAAVLNSFTQLQKQVQLFDSMNYLKSFSVGDVWVAVGWSSDVIPAAKRMSNVAV 382
Query: 121 VVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIP 180
VVPKSG+SLWADLWAIP A+R +T QIG R RGPSPL+HQW +FCLQ+AR+LPF+Q+VIP
Sbjct: 383 VVPKSGSSLWADLWAIPCATRFQTDQIGSRARGPSPLVHQWFDFCLQSARSLPFRQDVIP 442
Query: 181 GASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLV 240
GASP LE+ + ++P++ K KP DTNL+ GVPP EIL RCEFLEPLS L DY+WL+
Sbjct: 443 GASPLHLESPVPEVPQDKNKRKPKLDTNLVRGVPPPEILERCEFLEPLSGKALEDYQWLM 502
Query: 241 ADLQKPAPVLMKRVQHYLSSLI 262
+ +Q+P L + +S+++
Sbjct: 503 SRVQRPRLGLFGNMLQKMSAVL 524
>gi|357165613|ref|XP_003580439.1| PREDICTED: uncharacterized protein LOC100830894 [Brachypodium
distachyon]
Length = 526
Score = 358 bits (919), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 162/262 (61%), Positives = 215/262 (82%)
Query: 1 MVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID 60
+VIAYKKSKF++HNL PI+DW+DLWRPELAG+ISMV+SPREVIG+VLK +G+SYN+ +++
Sbjct: 259 VVIAYKKSKFKQHNLKPIQDWEDLWRPELAGKISMVDSPREVIGAVLKRLGSSYNTIDME 318
Query: 61 LQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAV 120
+V+GG+ ++ + L Q +LFDS +YLK+FG+GDVWV VGWSSDV+PA KRMSNVAV
Sbjct: 319 TEVSGGREAILNSFVQLQKQVQLFDSMNYLKSFGVGDVWVTVGWSSDVIPAAKRMSNVAV 378
Query: 121 VVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIP 180
VVPKSG+SLWADLWAIP A+R +T +IGGR RGPSPLIHQW +FCLQ+AR+LPF+QE+IP
Sbjct: 379 VVPKSGSSLWADLWAIPCATRFQTDRIGGRTRGPSPLIHQWFDFCLQSARSLPFRQEIIP 438
Query: 181 GASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLV 240
GASP LE ++P+++ K KP +TNL+ GVPP EIL RCEFLEPL + L DY+WL+
Sbjct: 439 GASPLFLENPAPEVPQDVNKRKPKLETNLVRGVPPPEILERCEFLEPLPDKVLGDYQWLM 498
Query: 241 ADLQKPAPVLMKRVQHYLSSLI 262
+ +Q+P L+ + +S+++
Sbjct: 499 SRVQRPHGGLLGNMLQKISNVL 520
>gi|242077052|ref|XP_002448462.1| hypothetical protein SORBIDRAFT_06g027530 [Sorghum bicolor]
gi|241939645|gb|EES12790.1| hypothetical protein SORBIDRAFT_06g027530 [Sorghum bicolor]
Length = 531
Score = 358 bits (918), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 163/262 (62%), Positives = 211/262 (80%)
Query: 1 MVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID 60
MVIAYKK+KF++HNL PI+DW+DLWRPELAGRISMV+SPRE+IG+VLK++G+SYN+ +++
Sbjct: 264 MVIAYKKNKFKRHNLKPIQDWEDLWRPELAGRISMVDSPREIIGAVLKHLGSSYNTVDME 323
Query: 61 LQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAV 120
+ V GG+ +V + L Q +LFDS YLK+F +GDVWVAVGWSSDV+PA KRMSNVAV
Sbjct: 324 IDVNGGREAVLNSFTQLQKQVQLFDSMDYLKSFSVGDVWVAVGWSSDVIPAAKRMSNVAV 383
Query: 121 VVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIP 180
VVPKSG+S+WADLWAIP A+R +T QIG R RGPSPLIHQW +FCLQ+AR+LPF+Q+VIP
Sbjct: 384 VVPKSGSSIWADLWAIPCATRFQTDQIGSRTRGPSPLIHQWFDFCLQSARSLPFRQDVIP 443
Query: 181 GASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLV 240
GASP LE + ++P++ K KP +TNL+ GVPP EIL RCEFLEPLS L DY+WL+
Sbjct: 444 GASPLYLENPVPEVPQDKNKRKPKLETNLVRGVPPPEILERCEFLEPLSGKALEDYQWLM 503
Query: 241 ADLQKPAPVLMKRVQHYLSSLI 262
+ +Q+P V +S+++
Sbjct: 504 SKVQRPRLGFFGNVLQKMSAVL 525
>gi|326516630|dbj|BAJ92470.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518394|dbj|BAJ88226.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326519014|dbj|BAJ92667.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520335|dbj|BAK07426.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326524998|dbj|BAK04435.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 531
Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 162/262 (61%), Positives = 212/262 (80%)
Query: 1 MVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID 60
+VIAYKKSKF++HNL PI+DW+DLWRPELAG+ISMV+SPREVIG+VLK +G+SYN+ +++
Sbjct: 264 VVIAYKKSKFKQHNLKPIQDWEDLWRPELAGKISMVDSPREVIGAVLKQLGSSYNTIDME 323
Query: 61 LQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAV 120
+V GG+ +V + L Q +LFDS +YLK+FG+GDVWV VGWSSDV+PA KRMSNVAV
Sbjct: 324 TEVNGGREAVLNSFTQLQKQVQLFDSMNYLKSFGVGDVWVTVGWSSDVIPAAKRMSNVAV 383
Query: 121 VVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIP 180
VVPKSG+SLWADLWAIP A+R +T +IGGR RGPSPLIHQW +FCLQ+AR+LPF+QE+IP
Sbjct: 384 VVPKSGSSLWADLWAIPCATRFQTDRIGGRTRGPSPLIHQWFDFCLQSARSLPFRQEIIP 443
Query: 181 GASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLV 240
GASP LE +P++ K +P +TNL+ GVPP EIL +CEFLEPLS+ + DY+WL+
Sbjct: 444 GASPLFLEHPAPDVPQDRNKKQPKLETNLVRGVPPPEILEKCEFLEPLSDKAVGDYQWLM 503
Query: 241 ADLQKPAPVLMKRVQHYLSSLI 262
+ +Q+P L V +S+++
Sbjct: 504 SRVQRPRSGLFGNVLQRISTVL 525
>gi|302820071|ref|XP_002991704.1| hypothetical protein SELMODRAFT_133925 [Selaginella moellendorffii]
gi|300140553|gb|EFJ07275.1| hypothetical protein SELMODRAFT_133925 [Selaginella moellendorffii]
Length = 387
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 134/240 (55%), Positives = 170/240 (70%), Gaps = 3/240 (1%)
Query: 1 MVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID 60
MVIAY+K K K L I+DW DLW+PELAGRISM+ S REV+G VLK +GASYN+ N+D
Sbjct: 148 MVIAYRKDKLAKAGLQDIKDWDDLWKPELAGRISMIESTREVVGLVLKSLGASYNARNLD 207
Query: 61 LQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAV 120
+V GG+ +V++ L QA +FD+ +YL+A G GDVW+AVGWS+DVLP KR SNV V
Sbjct: 208 AEVHGGQEAVKERFLRLRKQA-MFDNINYLRALGAGDVWIAVGWSNDVLPFAKRQSNVGV 266
Query: 121 VVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIP 180
+ P SG SLWAD+WAIPAA ++++ + GGR+RGPSPL+ QW+EFCLQ AR+L F QE
Sbjct: 267 IAPASGTSLWADVWAIPAAIKIKSDKAGGRIRGPSPLVSQWLEFCLQPARSLAFHQEAFC 326
Query: 181 GASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLV 240
GASP E P DTNL+ G+PP +IL + EFLEPL E TL+ Y WL+
Sbjct: 327 GASPLRFADVADNGSSE--PAGPRLDTNLVSGLPPKDILGKSEFLEPLEEETLAKYRWLL 384
>gi|168015953|ref|XP_001760514.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688211|gb|EDQ74589.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 438
Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 133/255 (52%), Positives = 177/255 (69%), Gaps = 14/255 (5%)
Query: 1 MVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID 60
+V A+KK K ++ ++PI DWKDL++P+LAGRI+MV+SPREV+G+VLK +GASYN+N+ D
Sbjct: 150 LVFAFKKDKLERNGISPIRDWKDLFQPQLAGRIAMVDSPREVVGAVLKSLGASYNTNDFD 209
Query: 61 LQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAV 120
V GG+ +V++ L Q RLFD YLKA GDVWVAVGWSSD++P KR SN++V
Sbjct: 210 ADVPGGREAVKERFLALQKQVRLFDDNDYLKAMSAGDVWVAVGWSSDIIPYSKRASNISV 269
Query: 121 VVPKSGASLWADLWAIPAASRLE-TKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVI 179
P+SG SLWADLWAIPA + E + +GGRVRGPSPL+ QW++FCLQ ARA F +V
Sbjct: 270 YAPESGTSLWADLWAIPATTTFEKAENVGGRVRGPSPLVFQWLDFCLQPARATTFANDVF 329
Query: 180 PGASP---------SALETTLVKLPEELLKGKPSQ----DTNLIVGVPPAEILARCEFLE 226
GASP E T ++ KP D+N++ G+PP EI+A+ EFLE
Sbjct: 330 VGASPLTWSEKSETEISENTFLETGASQSGKKPKTVVTLDSNIVQGMPPDEIVAKSEFLE 389
Query: 227 PLSEATLSDYEWLVA 241
PLS+ LSDY+WL++
Sbjct: 390 PLSDKALSDYQWLLS 404
>gi|302818713|ref|XP_002991029.1| hypothetical protein SELMODRAFT_132900 [Selaginella moellendorffii]
gi|300141123|gb|EFJ07837.1| hypothetical protein SELMODRAFT_132900 [Selaginella moellendorffii]
Length = 387
Score = 275 bits (704), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/240 (55%), Positives = 170/240 (70%), Gaps = 3/240 (1%)
Query: 1 MVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID 60
MVIAY+K K K L I+DW DLW+PELAG+ISM+ S REV+G VLK +GASYN+ N+D
Sbjct: 148 MVIAYRKDKLAKAGLQDIKDWDDLWKPELAGKISMIESTREVVGLVLKSLGASYNARNLD 207
Query: 61 LQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAV 120
+V GG+ +V++ L QA +F++ +YL+A G GDVW+AVGWS+DVLP KR SNV V
Sbjct: 208 AEVHGGQEAVKERFLRLRKQA-MFENINYLRALGAGDVWIAVGWSNDVLPFAKRQSNVGV 266
Query: 121 VVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIP 180
+ P SG SLWAD+WAIPAA+ +++ + GGR+RGPSPL+ QW+EFCLQ AR+L F QE
Sbjct: 267 IAPASGTSLWADVWAIPAATTIKSDKAGGRIRGPSPLVSQWLEFCLQPARSLAFHQEAFC 326
Query: 181 GASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLV 240
GASP E P DTNL+ G+PP +IL + EFLEPL E TL+ Y WL+
Sbjct: 327 GASPLRFADVADNGSSE--PAGPRLDTNLVSGLPPKDILGKSEFLEPLEEETLAKYRWLL 384
>gi|428223996|ref|YP_007108093.1| extracellular solute-binding protein [Geitlerinema sp. PCC 7407]
gi|427983897|gb|AFY65041.1| extracellular solute-binding protein family 1 [Geitlerinema sp. PCC
7407]
Length = 388
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/235 (41%), Positives = 134/235 (57%), Gaps = 23/235 (9%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VIAY+K KF ++ L P +DW DLW+P L GR+S+++ REVIG VLK +G SYN D
Sbjct: 167 VIAYRKDKFERNGLRPPQDWADLWQPGLRGRLSLLDQEREVIGLVLKKLGQSYNV--ADP 224
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
G + ++L Q + ++ST YL+ +GD W AVGWS+DVLP ++ ++AVV
Sbjct: 225 TTVTGLVEEARSLH---QQVKFYNSTAYLEPLLLGDTWAAVGWSTDVLPLLESQRHLAVV 281
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
VP+SG +LWAD+W AA E Q L+++WI+FC A A F V
Sbjct: 282 VPQSGTALWADVWVQAAAPASEAVQ---------DLMNEWIDFCWNPAIAGQFSL-VSRA 331
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDY 236
SP LP+ L QD +++ +PP E+L RCEFLEPL EA Y
Sbjct: 332 VSPIVPSLDRSTLPQSL------QDNSIL--LPPPEVLERCEFLEPLPEAAKQTY 378
>gi|422303925|ref|ZP_16391274.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9806]
gi|389791060|emb|CCI13120.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9806]
Length = 382
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/238 (40%), Positives = 136/238 (57%), Gaps = 28/238 (11%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VIAY + KF + + P +DW DLWRPEL+G+I+++++ REVIG LK +G SYNS+N+
Sbjct: 165 VIAYNEEKFAQFDWRP-QDWSDLWRPELSGKIALIDNRREVIGLTLKKLGYSYNSSNLK- 222
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
QV S++ L L Q R + S HYL+ +GDVW++VGWS+D+LP R + + VV
Sbjct: 223 QVT----SLKDQLFALQKQVRFYSSQHYLQPLILGDVWLSVGWSNDILPVSDRYNKIKVV 278
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
VPKSG SLW+D+W P + P+ L+ QWI FC Q+ A G
Sbjct: 279 VPKSGTSLWSDVWVKPVLTT------------PNSLVDQWINFCWQSESATKISL-FTSG 325
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
SP L ++P + +K P L+V E + + +FL PLS AT +YE L
Sbjct: 326 LSPLILTQNPDQIPPD-IKNNP-----LLVN---PEAVKKSDFLNPLSPATEQEYEQL 374
>gi|443657684|ref|ZP_21131934.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Microcystis aeruginosa DIANCHI905]
gi|159027984|emb|CAO87944.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443333157|gb|ELS47731.1| tat (twin-arginine translocation) pathway signal sequence domain
protein [Microcystis aeruginosa DIANCHI905]
Length = 382
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 94/238 (39%), Positives = 136/238 (57%), Gaps = 28/238 (11%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VIAY + KF + + P +DW DLWRPEL G+I+++++ REVIG LK +G SYN++++
Sbjct: 165 VIAYNEEKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSYNASDLK- 222
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
QV G ++ L L Q R + S +YL+ +GDVW++VGWS+D+LP R + + VV
Sbjct: 223 QVTG----LKDQLFALQKQVRFYSSQYYLQPLILGDVWLSVGWSNDILPVSDRYNKIKVV 278
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
VPKSG SLW+D+W P + P+ L+ QWI+FC Q A G
Sbjct: 279 VPKSGTSLWSDVWVKPVLTT------------PNSLVQQWIDFCWQPESATKISL-FTSG 325
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
SP L L ++P + +K P L+V E + + +FL PLS AT +YE L
Sbjct: 326 LSPLILTENLDQIPPD-IKNNP-----LLVN---PEAVKKSDFLNPLSPATEQEYEQL 374
>gi|425459716|ref|ZP_18839202.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9808]
gi|389827779|emb|CCI20808.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9808]
Length = 382
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 93/238 (39%), Positives = 135/238 (56%), Gaps = 28/238 (11%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VIAY + KF + + P +DW DLWRPEL G+I+++++ REVIG LK +G SYNS+++
Sbjct: 165 VIAYNEKKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSYNSSDLK- 222
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
QV G ++ L L Q R + S HYL+ +GDVW++VGWS+D+LP R + + VV
Sbjct: 223 QVTG----LKDQLFALQKQVRFYSSQHYLQPLILGDVWLSVGWSNDILPVSDRYNKIKVV 278
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
VPKSG SLW+D+W P + P+ L+ QWI+FC Q A G
Sbjct: 279 VPKSGTSLWSDVWVKPVLTT------------PNSLVQQWIDFCWQPESANKISL-FTSG 325
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
SP L ++P ++ ++ L+V E + + +FL PLS AT +YE L
Sbjct: 326 LSPLILTENPDQIPPDI------RNNPLLVN---PEAVKKSDFLNPLSPATEQEYEQL 374
>gi|166363771|ref|YP_001656044.1| periplasmic polyamine-binding protein [Microcystis aeruginosa
NIES-843]
gi|166086144|dbj|BAG00852.1| periplasmic polyamine-binding protein [Microcystis aeruginosa
NIES-843]
Length = 382
Score = 159 bits (403), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 94/238 (39%), Positives = 135/238 (56%), Gaps = 28/238 (11%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VIAY + KF + + P +DW DLWRPEL G+I+++++ REVIG LK MG SYNS+++
Sbjct: 165 VIAYNEEKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKMGYSYNSSDLK- 222
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
QV G ++ L L Q + + S HYL+ +GDVW++VGWS+D+LP R + + VV
Sbjct: 223 QVMG----LKDQLFALQKQVKFYSSQHYLQPLILGDVWLSVGWSNDILPVSDRYNKIKVV 278
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
VPKSG SLW+D+W P + P+ L+ QWI+FC Q A G
Sbjct: 279 VPKSGTSLWSDVWVKPVLTT------------PNSLVEQWIDFCWQPESATKISL-FTSG 325
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
SP L + P+++ P N ++ P E + + +FL PLS AT +YE L
Sbjct: 326 LSP----LILTQNPDQI---SPDIRNNPLLVNP--EAIKKSDFLNPLSPATEQEYEQL 374
>gi|425472395|ref|ZP_18851246.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9701]
gi|389881535|emb|CCI37923.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9701]
Length = 382
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/238 (39%), Positives = 135/238 (56%), Gaps = 28/238 (11%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VIAY + KF + + P +DW DLWRPEL G+I+++++ REVIG LK +G SYNS+++
Sbjct: 165 VIAYNEEKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSYNSSDLK- 222
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
QV G ++ L L Q + + S HYL+ +GDVWV+VGWS+D+LP R + + VV
Sbjct: 223 QVMG----LKDQLFALQKQVKFYSSQHYLQPLILGDVWVSVGWSNDILPVSNRYNKIKVV 278
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
VPKSG SLW+D+W P + P+ L+ QWI+FC Q A G
Sbjct: 279 VPKSGTSLWSDVWVKPVLTT------------PNSLVQQWIDFCWQPESATKISL-FTSG 325
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
SP L + P+++ P N ++ P E + + +FL PLS AT +YE L
Sbjct: 326 LSP----LILTENPDQI---SPDIRNNPLLVNP--EAVKKSDFLNPLSPATEQEYEQL 374
>gi|113476419|ref|YP_722480.1| periplasmic polyamine-binding protein of ABC transporter
[Trichodesmium erythraeum IMS101]
gi|110167467|gb|ABG52007.1| periplasmic polyamine-binding protein of ABC transporter
[Trichodesmium erythraeum IMS101]
Length = 382
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/254 (37%), Positives = 139/254 (54%), Gaps = 39/254 (15%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
+IAY+ KF+ P +DW DLWRPEL G IS++N REVIG LK +G SYN+ NID
Sbjct: 161 LIAYRVDKFKALGWEP-KDWSDLWRPELKGNISLLNQAREVIGLTLKKLGKSYNTKNID- 218
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
QV ++ L L Q + + S +YL+ IGD W+AVGWS+D+LP +K+ +A V
Sbjct: 219 QVE----KLKAELVKLNQQVKFYSSNNYLQPLIIGDTWLAVGWSNDILPLLKKRKKIAAV 274
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCL--QTARALPFKQE-- 177
VP+SG +LWA+LW PAAS + L +WI FC Q A+ + +
Sbjct: 275 VPQSGTALWANLWVKPAAS------------PENSLTEKWINFCWQPQVAQQMSIITQTS 322
Query: 178 --VIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSD 235
++P +P+ L + + P LL P EI+ + EFL PL+ +T+
Sbjct: 323 SPIMPKINPNELISDIKNNPLLLL---------------PQEIIEKSEFLAPLANSTIEQ 367
Query: 236 YEWLVADLQKPAPV 249
Y+ L ++++P +
Sbjct: 368 YQKLWQEIRQPVHI 381
>gi|425443832|ref|ZP_18823896.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9443]
gi|389733602|emb|CCI02643.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9443]
Length = 382
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/238 (39%), Positives = 135/238 (56%), Gaps = 28/238 (11%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VIAY + KF + + P +DW DLWRPEL G+I+++++ REVIG LK +G SYNS+++
Sbjct: 165 VIAYNEEKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSYNSSDLK- 222
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
QV G ++ L L Q R + S +YL+ +GDVW++VGWS+D+LP R + + VV
Sbjct: 223 QVMG----LKDQLFALQKQVRFYSSQYYLQPLILGDVWLSVGWSNDILPVGDRYNKIKVV 278
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
VPKSG SLW+D+W P + P+ L+ QWI+FC Q A G
Sbjct: 279 VPKSGTSLWSDVWVKPVLTT------------PNSLVQQWIDFCWQPESANKISL-FTSG 325
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
SP L ++P + +K P L+V E + + +FL PLS AT +YE L
Sbjct: 326 LSPLVLTENPDQIPSD-IKNNP-----LLVN---PEAIKKSDFLNPLSPATEQEYEQL 374
>gi|427734714|ref|YP_007054258.1| spermidine/putrescine-binding periplasmic protein [Rivularia sp.
PCC 7116]
gi|427369755|gb|AFY53711.1| spermidine/putrescine-binding periplasmic protein [Rivularia sp.
PCC 7116]
Length = 388
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 137/245 (55%), Gaps = 28/245 (11%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VI Y+K K +K + IEDW DLWR EL GRIS++N PREVIG LK +G SYNS N+
Sbjct: 168 VIIYRKDKLKKFDWK-IEDWSDLWREELKGRISLLNQPREVIGLTLKKLGKSYNSENLQ- 225
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
S+++ L +L Q + ++ST+Y++ +GD W+AVGWS+D++ V R + VV
Sbjct: 226 ----SIKSLKEELQVLNQQVKFYNSTNYIEPLILGDTWLAVGWSNDIVSLVSRYPQLGVV 281
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCL--QTARALPFKQEVI 179
VP SG +LWADLW P + G + L ++WI+FC Q A+ + +
Sbjct: 282 VPNSGTALWADLWVQPKVT-------GKKDETQESLSNKWIDFCWKPQIAKQIAV---LT 331
Query: 180 PGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
SP E ++P KP Q NL+ P E+ + EFL PLS + + +Y+ L
Sbjct: 332 KANSPIDTEIPASEIP------KPLQ--NLLSANP--EVFEKSEFLLPLSSSAVKEYDSL 381
Query: 240 VADLQ 244
+++
Sbjct: 382 FREMK 386
>gi|425434255|ref|ZP_18814726.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9432]
gi|389676326|emb|CCH94643.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9432]
Length = 382
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/238 (38%), Positives = 134/238 (56%), Gaps = 28/238 (11%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VIAY + KF + + P +DW DLWRPEL G+I+++++ REVIG LK +G SYN +++
Sbjct: 165 VIAYNEKKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSYNYSDLK- 222
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
QV G ++ L L Q R + S HYL+ +GDVW++VGWS+D+LP R + + VV
Sbjct: 223 QVTG----LKDQLFALQKQVRFYSSQHYLQPLILGDVWLSVGWSNDILPVSDRHNKIKVV 278
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
VPKSG SLW+D+W P + P+ L+ QWI+FC Q A G
Sbjct: 279 VPKSGTSLWSDVWVKPVLTT------------PNSLVQQWIDFCWQPESANKISL-FTSG 325
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
SP L ++P ++ ++ L+V E + + +FL PLS AT +YE L
Sbjct: 326 LSPLILTENPDQIPPDI------RNNPLLVN---PEAVKKSDFLNPLSPATEQEYEQL 374
>gi|428211975|ref|YP_007085119.1| spermidine/putrescine-binding periplasmic protein [Oscillatoria
acuminata PCC 6304]
gi|428000356|gb|AFY81199.1| spermidine/putrescine-binding periplasmic protein [Oscillatoria
acuminata PCC 6304]
Length = 417
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/239 (40%), Positives = 130/239 (54%), Gaps = 24/239 (10%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VIAY+ +FR P +DW DLWRPEL R+S+++SPREVIG LK +G SYN + +D
Sbjct: 191 VIAYRVDRFRNLGWTP-QDWSDLWRPELRDRLSLLDSPREVIGLTLKTLGHSYNRDRLD- 248
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+Q+ L L QARL+ S YL+ +GD WVAVGWS+D+L ++R + V
Sbjct: 249 ----DLPELQEQLLALHRQARLYSSDAYLQPLLLGDTWVAVGWSTDILATMQRNPQIRAV 304
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSP---LIHQWIEFCLQTARALPFKQEV 178
VP SG +LW++LW PA + P+P L +QWI FC A+ Q +
Sbjct: 305 VPPSGTALWSELWVRPAGPNPVNPET------PTPASSLANQWINFCWNPEMAVQLSQ-L 357
Query: 179 IPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
ASP L +LP L TN I+ +P AE +A EF+EPL+ YE
Sbjct: 358 SKAASPMLLNRDRGELPNAL-------QTNGIL-LPTAEAIANSEFIEPLTPEIAETYE 408
>gi|440756421|ref|ZP_20935622.1| twin-arginine translocation pathway signal sequence domain protein
[Microcystis aeruginosa TAIHU98]
gi|440173643|gb|ELP53101.1| twin-arginine translocation pathway signal sequence domain protein
[Microcystis aeruginosa TAIHU98]
Length = 382
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/238 (38%), Positives = 135/238 (56%), Gaps = 28/238 (11%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VIAY + KF + + P +DW DLWRPEL G+I+++++ REVIG LK +G SYNS+++
Sbjct: 165 VIAYNEKKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSYNSSDLK- 222
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
QV G ++ L L Q R + S +YL+ +GDVW++VGWS+D+LP R + + VV
Sbjct: 223 QVMG----LKDQLFALQKQVRFYSSQYYLQPLILGDVWLSVGWSNDILPVSDRYNKIKVV 278
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
VPKSG SLW+D+W P + P+ L+ QWI+FC Q A G
Sbjct: 279 VPKSGTSLWSDVWVKPVLTT------------PNSLVQQWIDFCWQPESANKISL-FTSG 325
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
SP L ++P ++ ++ L+V E + + +FL PLS AT +YE L
Sbjct: 326 LSPLILTENPDQIPPDI------RNNPLLVN---PEAVKKSDFLNPLSPATEQEYEQL 374
>gi|209522903|ref|ZP_03271460.1| extracellular solute-binding protein family 1 [Arthrospira maxima
CS-328]
gi|376001837|ref|ZP_09779691.1| polyamine transporter subunit ; periplasmic-binding component of
ABC superfamily [Arthrospira sp. PCC 8005]
gi|423062300|ref|ZP_17051090.1| extracellular solute-binding protein family 1 [Arthrospira
platensis C1]
gi|209496490|gb|EDZ96788.1| extracellular solute-binding protein family 1 [Arthrospira maxima
CS-328]
gi|375329748|emb|CCE15444.1| polyamine transporter subunit ; periplasmic-binding component of
ABC superfamily [Arthrospira sp. PCC 8005]
gi|406716208|gb|EKD11359.1| extracellular solute-binding protein family 1 [Arthrospira
platensis C1]
Length = 371
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/236 (38%), Positives = 134/236 (56%), Gaps = 27/236 (11%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY+ +F K P DW+DLWR E GRIS+++ REVIG LK +G SYN+ ++DL
Sbjct: 150 IAYRVDRFEKLGWTPT-DWQDLWRSECQGRISLLDQAREVIGLTLKKLGYSYNTPDLDL- 207
Query: 63 VAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVV 122
V K ++Q L RL+DS +YLK +GD W+AVGWS D+ P V+R N+A+ +
Sbjct: 208 VPDLKAELEQ----LHQNVRLYDSNNYLKPLILGDTWLAVGWSGDISPQVQRQHNIAIAI 263
Query: 123 PKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGA 182
PKSG +LW+D+W P A+ +PL+ WI+FC Q A + ++ GA
Sbjct: 264 PKSGTALWSDVWVKPIATSATN----------NPLVQAWIDFCWQPEIAT--QMSLLTGA 311
Query: 183 -SPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
SP + LP++L ++ L+ P +IL R EFL PL+ A++ Y+
Sbjct: 312 TSPIVWGMSRADLPKDL-----RENPQLL---PDTDILERSEFLLPLTVASMQQYQ 359
>gi|332706228|ref|ZP_08426297.1| spermidine/putrescine-binding periplasmic protein [Moorea producens
3L]
gi|332355065|gb|EGJ34536.1| spermidine/putrescine-binding periplasmic protein [Moorea producens
3L]
Length = 396
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 94/243 (38%), Positives = 132/243 (54%), Gaps = 17/243 (6%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VIAY++ KF+ P DW DLWR L RIS++N PREVIG LK +G SYN +++
Sbjct: 169 VIAYRRDKFKALGWTPT-DWSDLWRESLRDRISVLNHPREVIGLTLKNLGLSYNQQDLN- 226
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
QV K +++Q LA Q + + S HYLK +GD WVAVGWS+D+L R + V
Sbjct: 227 QVKDLKPALRQ----LAKQVKFYSSDHYLKPLVLGDTWVAVGWSTDILALRTRDRQIEAV 282
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
VP+SG +LW+D+W P + + +WIEFC + A +
Sbjct: 283 VPQSGTALWSDVWVKPVSVSSASDSSESNSESDL--SKKWIEFCWDSKSAKQISL-LTNA 339
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVA 241
ASP L+ KLP+++ L + +P AEIL +CEFL PL E+T YE L
Sbjct: 340 ASPILLKIPRNKLPQDI--------QTLPLLLPEAEILNKCEFLHPLPESTQKQYESLWK 391
Query: 242 DLQ 244
+++
Sbjct: 392 EMR 394
>gi|409993345|ref|ZP_11276490.1| periplasmic polyamine-binding protein of ABC transporter
[Arthrospira platensis str. Paraca]
gi|291567216|dbj|BAI89488.1| putative ABC transporter substrate-binding protein [Arthrospira
platensis NIES-39]
gi|409935824|gb|EKN77343.1| periplasmic polyamine-binding protein of ABC transporter
[Arthrospira platensis str. Paraca]
Length = 389
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 93/236 (39%), Positives = 132/236 (55%), Gaps = 27/236 (11%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY+ KF K P DW+DLWR E GRIS++N REVIG LK +G SYN+ ++DL
Sbjct: 168 IAYRVDKFEKLGWTPT-DWEDLWRSECKGRISLLNQGREVIGLTLKKLGYSYNTPDLDL- 225
Query: 63 VAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVV 122
V K ++Q L RL+DS +YLK +GD W+AVGWS D+ P ++R N+A+ +
Sbjct: 226 VPDLKAQLEQ----LHQNVRLYDSDNYLKPLILGDTWLAVGWSGDISPQLQRQHNIAIAI 281
Query: 123 PKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGA 182
PKSG +LW+D+W P A+ +PL+ WI+FC Q A + ++ GA
Sbjct: 282 PKSGTALWSDVWVKPKATSATN----------NPLVQAWIDFCWQPEIAT--QMSLLTGA 329
Query: 183 -SPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
SP LP++ L+ P +P +IL R EFL PL+ A++ Y+
Sbjct: 330 TSPIVWGMPRADLPKD-LRENPQL-------LPDTDILDRSEFLLPLTVASMQQYQ 377
>gi|425456329|ref|ZP_18836040.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9807]
gi|389802604|emb|CCI18362.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
9807]
Length = 382
Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 92/238 (38%), Positives = 134/238 (56%), Gaps = 28/238 (11%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VIAY + KF + + P +DW DLWRPEL G+I+++++ REVIG LK +G SYN +++
Sbjct: 165 VIAYNEEKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSYNYSDLK- 222
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
QV G ++ L L + R + S +YL+ +GDVW++VGWS+D+LP R + + VV
Sbjct: 223 QVMG----LKDQLFALQKRVRFYSSQYYLQPLILGDVWLSVGWSNDILPVSDRYNKIKVV 278
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
VPKSG SLW+D+W P + P+ L+ QWI+FC Q A G
Sbjct: 279 VPKSGTSLWSDVWVKPVLTT------------PNSLVEQWIDFCWQPESATKISL-FTSG 325
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
SP L ++P + +K P L+V E + + +FL PLS AT +YE L
Sbjct: 326 LSPLVLTENPDQIPSD-IKNNP-----LLVN---PEAIKKSDFLNPLSPATEQEYEQL 374
>gi|428775058|ref|YP_007166845.1| periplasmic polyamine-binding protein [Halothece sp. PCC 7418]
gi|428689337|gb|AFZ42631.1| periplasmic polyamine-binding protein [Halothece sp. PCC 7418]
Length = 372
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 128/243 (52%), Gaps = 25/243 (10%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VIAY+ +FR+ PI DWKDLWR EL R+S++N PREVIG LK +G SYN+++++
Sbjct: 150 VIAYRADQFREAGYEPITDWKDLWREELRDRVSLLNQPREVIGFTLKKLGQSYNTSDLE- 208
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
QV K LA L Q + + S YL+ + D WVAVGWSSD+L R ++ V
Sbjct: 209 QVPNLKTE----LATLHQQVKFYSSQAYLQPLVLEDTWVAVGWSSDILQLQTRYPDLTTV 264
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
+P+SG SLWAD+W P S + QWI FC + A
Sbjct: 265 IPESGTSLWADVWVQPTGK-----------PSLSEAMLQWINFCWEEQAATQIGL-FTNA 312
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVA 241
+SP L T +LPE L + + + +PP ++ + EFL PLS T Y+ L
Sbjct: 313 SSPILLNTKTDQLPESLQQDQ--------LRIPPQTLIEKSEFLLPLSAQTKKQYQQLWR 364
Query: 242 DLQ 244
+++
Sbjct: 365 EMR 367
>gi|425451461|ref|ZP_18831282.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
7941]
gi|389767205|emb|CCI07314.1| Genome sequencing data, contig C304 [Microcystis aeruginosa PCC
7941]
Length = 392
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/236 (38%), Positives = 133/236 (56%), Gaps = 28/236 (11%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VIAY + KF + + P +DW DLWRPEL G+I+++++ REVIG LK +G SYN +++
Sbjct: 165 VIAYNEKKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSYNYSDLK- 222
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
QV G ++ L L Q R + S +YL+ +GDVW++VGWS+D+LP R + + VV
Sbjct: 223 QVTG----LKDQLFALQKQVRFYSSQYYLQPLILGDVWLSVGWSNDILPVSDRYNKIKVV 278
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
VPKSG SLW+D+W P + P+ L+ QWI+FC Q A G
Sbjct: 279 VPKSGTSLWSDVWVKPVLTT------------PNSLVEQWIDFCWQPESANKISL-FTSG 325
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
SP L ++P ++ ++ L+V E + + +FL PLS AT +YE
Sbjct: 326 LSPLILTENPDQIPPDI------RNNPLLVN---PEAVKKSDFLNPLSPATEQEYE 372
>gi|434405536|ref|YP_007148421.1| spermidine/putrescine-binding periplasmic protein [Cylindrospermum
stagnale PCC 7417]
gi|428259791|gb|AFZ25741.1| spermidine/putrescine-binding periplasmic protein [Cylindrospermum
stagnale PCC 7417]
Length = 382
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/243 (39%), Positives = 134/243 (55%), Gaps = 29/243 (11%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VI Y + KF K + P DW DLWR EL RIS++N PREVIG VLK +G SYN+ N+D
Sbjct: 168 VIVYNREKFEKLDWRP-RDWNDLWRDELQQRISLLNQPREVIGLVLKKLGKSYNTENLD- 225
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
Q+ +Q L L Q + + S +YL+ IGD W+AVGWSSD++P + R + VV
Sbjct: 226 QIP----ELQTELQKLNQQVKFYSSNNYLEPLIIGDTWLAVGWSSDIVPLLGRYPQLTVV 281
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
+P+SG ++WADLW P G + L +QWI+FC Q A KQ +
Sbjct: 282 IPQSGTAIWADLWVRPTGV------------GKASLPYQWIDFCWQPNIA---KQISLLT 326
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVA 241
S S + T +V + +P Q NL++ P +I + EFL PLS + YE L +
Sbjct: 327 KSNSPISTNIVASDIQ----EPLQ--NLLLTNP--QIFQKSEFLLPLSLSATKQYESLFS 378
Query: 242 DLQ 244
L+
Sbjct: 379 KLK 381
>gi|428304513|ref|YP_007141338.1| extracellular solute-binding protein [Crinalium epipsammum PCC
9333]
gi|428246048|gb|AFZ11828.1| extracellular solute-binding protein family 1 [Crinalium epipsammum
PCC 9333]
Length = 391
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 135/237 (56%), Gaps = 22/237 (9%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VIAY+K KF+ P +W DLWR E GRIS+++ PRE+IG LK++G SYN+ N+D
Sbjct: 165 VIAYRKDKFKSLGWTPT-NWSDLWREECKGRISLLDQPREIIGLTLKHLGYSYNTTNLD- 222
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
++ K ++++ L +L+ S YL+ +GD W+AVGWS+DVL A+K +A V
Sbjct: 223 EIKNLKDALKK----LHQNVKLYSSDTYLQPLILGDTWLAVGWSTDVLKAIKSEPKIAAV 278
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQ--TARALPFKQEVI 179
VP+SG +LWAD+W P +L + L QWI+FC Q +A A+ E +
Sbjct: 279 VPQSGTALWADVWVRP---KLASANSTSDTPNLQTLADQWIDFCWQPKSASAISIFTEAV 335
Query: 180 PGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDY 236
SP + +P++L+K + + +P +I+ + EFL PLS+AT Y
Sbjct: 336 ---SPVLINMDGNDIPKDLVKNQ--------LLLPNKQIIQKSEFLHPLSKATEQQY 381
>gi|428311092|ref|YP_007122069.1| spermidine/putrescine-binding periplasmic protein [Microcoleus sp.
PCC 7113]
gi|428252704|gb|AFZ18663.1| spermidine/putrescine-binding periplasmic protein [Microcoleus sp.
PCC 7113]
Length = 432
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/253 (37%), Positives = 137/253 (54%), Gaps = 27/253 (10%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VI Y++ KF + P +DW DLWRPEL RIS+++ PREVIG LK +G SYN N+
Sbjct: 192 VIVYRRDKFEELGWTP-KDWSDLWRPELRDRISLLDQPREVIGLTLKKLGFSYNHKNLS- 249
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
QV ++++ L L Q + + S YL+ +GD W+A+GWS+DVL + +
Sbjct: 250 QVP----NLKEELLKLHQQVKYYSSNQYLEPLLLGDTWLALGWSTDVLSVQSGYRQIDSI 305
Query: 122 VPKSGASLWADLWAIPA--ASRLETKQIGGRVRGPS------PLIHQWIEFCLQTARALP 173
VP SG +LWAD+W PA A+R T + PL QWIEFC + LP
Sbjct: 306 VPLSGTALWADVWVQPAPIAARSNTVKTSASSTPQQDSSVNMPLTKQWIEFCW---KPLP 362
Query: 174 FKQEVI--PGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEA 231
+Q + ASP + KLP+ L + + + VP +++L +CEFLEPL +
Sbjct: 363 AQQISVLSHAASPMFADVEPTKLPKTLRENR--------LLVPDSKVLKKCEFLEPLPQE 414
Query: 232 TLSDYEWLVADLQ 244
DYE L +++
Sbjct: 415 ISQDYEKLWTEIR 427
>gi|428769711|ref|YP_007161501.1| periplasmic polyamine-binding protein [Cyanobacterium aponinum PCC
10605]
gi|428683990|gb|AFZ53457.1| periplasmic polyamine-binding protein [Cyanobacterium aponinum PCC
10605]
Length = 380
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 131/236 (55%), Gaps = 33/236 (13%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
+IAY++ K + P +DW+DLW+PE+ R S++N PREVIG VLK +G SYN+ N+
Sbjct: 172 MIAYREDKLQNLGWQP-QDWEDLWKPEIKHRFSLLNQPREVIGLVLKKLGYSYNTKNLK- 229
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
Q+ ++ L L Q + +DS +YL+ +GD W+AVGWS+D++P ++R N+ V
Sbjct: 230 QIN----NLLPELKTLNQQVKFYDSRNYLQPLILGDTWLAVGWSTDIIPLIERYHNIKAV 285
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
+P SG SLWAD+W P E ++ I+ WI+FC Q+ A +Q +
Sbjct: 286 IPLSGTSLWADIWVKPRNQSSELEK-----------IYNWIDFCWQSKSA---RQISLFS 331
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
+ S +ET +TN + + E+LA+ EF+EPL ++YE
Sbjct: 332 SGISPVETNF-------------SETNRQIPLMSPEVLAKSEFIEPLESQFFAEYE 374
>gi|443329204|ref|ZP_21057792.1| spermidine/putrescine-binding periplasmic protein [Xenococcus sp.
PCC 7305]
gi|442791149|gb|ELS00648.1| spermidine/putrescine-binding periplasmic protein [Xenococcus sp.
PCC 7305]
Length = 393
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 134/242 (55%), Gaps = 26/242 (10%)
Query: 2 VIAYKKSKFRKHNLAPIE-----DWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNS 56
VIAY+K K ++ N +E DW DLWRPELAG+IS++++ RE+IG LK +G SYNS
Sbjct: 158 VIAYRKDKLQEFNKDRVEKLEITDWADLWRPELAGQISLLDNYREIIGLTLKKLGHSYNS 217
Query: 57 NNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS 116
+N+ +++ LA L Q + + ST YL+ +GD+W AVGWS+D+LP V+R
Sbjct: 218 SNLT-----AITNLESELATLHQQVKFYSSTKYLQPLALGDLWAAVGWSTDILPLVRRYP 272
Query: 117 N-VAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFK 175
+ + +VVP SG SLWADLW P IG RV + WI+FC Q + A
Sbjct: 273 DKIGMVVPASGTSLWADLWVQPTVD----GSIGDRVERR---LASWIDFCWQDSSASTL- 324
Query: 176 QEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSD 235
G SP + V+L +EL + ++L ++ + +F+EPL+ +
Sbjct: 325 MLFTNGISPILNQENQVELTKELKNNQDFIQSSL-------KLFSNSDFIEPLTTEVTQE 377
Query: 236 YE 237
Y+
Sbjct: 378 YQ 379
>gi|414075874|ref|YP_006995192.1| solute-binding protein [Anabaena sp. 90]
gi|413969290|gb|AFW93379.1| solute-binding protein [Anabaena sp. 90]
Length = 376
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 92/236 (38%), Positives = 128/236 (54%), Gaps = 29/236 (12%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VI Y + KF++ P DW DLWR EL RIS++N PREVIG VLK +G SYN+ NI
Sbjct: 161 VIIYNQEKFQELGWKPT-DWSDLWRSELQNRISLLNHPREVIGLVLKKLGKSYNTENIK- 218
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
Q++ K +Q L Q + +DS +YL+ GD W+AVGWS D++P + R A V
Sbjct: 219 QISALKPELQ----ALNQQVKFYDSQNYLEPLITGDTWLAVGWSHDIIPVISRYQKFAAV 274
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
VP+SG ++W DLW P + L +QW++FCLQ + KQ +
Sbjct: 275 VPQSGTAIWTDLWVSPTGVSNDG------------LAYQWLDFCLQPNTS---KQIALLT 319
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
S S ++ +V L Q NL++ AEILA+ EF+ PL A + +YE
Sbjct: 320 KSNSPVDNAMV------LGDIQKQLQNLLLT--DAEILAKSEFILPLPPAVMKEYE 367
>gi|390439185|ref|ZP_10227598.1| Genome sequencing data, contig C304 [Microcystis sp. T1-4]
gi|389837404|emb|CCI31722.1| Genome sequencing data, contig C304 [Microcystis sp. T1-4]
Length = 382
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 132/238 (55%), Gaps = 28/238 (11%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VIAY + KF + + P +DW DLWRPEL G+I+++++ REVIG LK +G SYNS+++
Sbjct: 165 VIAYNEEKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSYNSSDLK- 222
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
QV G ++ L L Q + + S +YL+ +GD+W++VGWS+D+LP R + VV
Sbjct: 223 QVTG----LKDELFALQKQVKFYSSQYYLQPLILGDIWLSVGWSNDILPVSDRYKKIKVV 278
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
VP SG SLW+D+W P + P+ L+ QWI+FC Q A G
Sbjct: 279 VPNSGTSLWSDVWVKPVLTT------------PNSLVQQWIDFCWQPESATKISL-FTSG 325
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
SP ++P + +K P L+V E + + +FL PLS AT +YE L
Sbjct: 326 LSPLIPTENPDQIPPD-IKNNP-----LLVN---PEAIKKSDFLNPLSPATEQEYEQL 374
>gi|425439720|ref|ZP_18820036.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9717]
gi|389720001|emb|CCH96242.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9717]
Length = 382
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/238 (37%), Positives = 132/238 (55%), Gaps = 28/238 (11%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VIAY + KF + + P +DW DLWRPEL G+I+++++ REVIG LK +G SYNS+++
Sbjct: 165 VIAYNEEKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSYNSSDLKQ 223
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
A ++ L L Q + + +YL+ +GDVW++VGWS+D+LP R + + VV
Sbjct: 224 VTA-----LKDQLFALQKQVKFYSYQYYLQPLILGDVWLSVGWSNDILPVSDRYNKIKVV 278
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
VPKSG SLW+D+W P + P+ L+ QWI+FC Q A G
Sbjct: 279 VPKSGTSLWSDVWVKPVLTT------------PNSLVEQWIDFCWQPESATKISL-FTSG 325
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
SP L + P+++ P N ++ P E + + +FL PLS AT +YE L
Sbjct: 326 LSP----LILTQNPDQI---SPDIRNNPLLVNP--EAIKKSDFLNPLSPATEQEYEQL 374
>gi|282898041|ref|ZP_06306036.1| periplasmic polyamine-binding protein of ABC transporter
[Raphidiopsis brookii D9]
gi|281197185|gb|EFA72086.1| periplasmic polyamine-binding protein of ABC transporter
[Raphidiopsis brookii D9]
Length = 275
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/239 (38%), Positives = 138/239 (57%), Gaps = 28/239 (11%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
V+ Y + + + N PI DW DLWR +L RIS+ N PREVIG VLK +G SYN+ N +
Sbjct: 53 VLVYNQKQLQNFNWQPI-DWSDLWRSDLRSRISLPNHPREVIGLVLKKLGRSYNTVN-PV 110
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
++ KI ++ L Q + ++ST+YL+ GD W+AVGWS+D++P + R + V
Sbjct: 111 EIPNLKIELES----LNQQVKFYESTNYLEPLITGDTWLAVGWSNDIIPILSRYPQLRAV 166
Query: 122 VPKSGASLWADLWAIPAASRL-ETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIP 180
+P+SG ++WAD+W PA + + ET + LI QWI+FC Q A +Q V+
Sbjct: 167 IPQSGTAIWADIWVQPANTLITETDKTDN-------LILQWIDFCWQPDIA---RQIVML 216
Query: 181 GA--SPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
G +P+ + T+ V +G NL+ V E+L +CEFL+PLS +++ YE
Sbjct: 217 GKTNTPTFVNTSKV-------QGISDDTQNLL--VIEHELLEKCEFLKPLSLESINQYE 266
>gi|425467732|ref|ZP_18847011.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9809]
gi|389829411|emb|CCI29285.1| Periplasmic polyamine-binding protein [Microcystis aeruginosa PCC
9809]
Length = 382
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/238 (37%), Positives = 131/238 (55%), Gaps = 28/238 (11%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VIAY + KF + + P +DW DLWRPEL G+I+++++ REVIG LK +G SYN +++
Sbjct: 165 VIAYNEEKFAQFDWRP-QDWSDLWRPELTGKIALIDNRREVIGLTLKKLGYSYNYSDLKQ 223
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
A ++ L L Q + + S +YL+ +GDVW++VGWS+D+LP R + VV
Sbjct: 224 VTA-----LKDQLFALQKQVKFYSSQYYLQPLILGDVWLSVGWSNDILPVSDRYKKIKVV 278
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
VPKSG SLW+D+W P + P+ L+ QWI+FC Q A G
Sbjct: 279 VPKSGTSLWSDVWVKPVLTT------------PNSLVEQWIDFCWQPESATKISL-FTSG 325
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
SP L + P+++ P N ++ P E + + +FL PLS AT +YE L
Sbjct: 326 LSP----LILTQNPDQI---SPDIRNNPLLVNP--EAIKKSDFLNPLSPATEQEYEQL 374
>gi|411118674|ref|ZP_11391054.1| spermidine/putrescine-binding periplasmic protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410710537|gb|EKQ68044.1| spermidine/putrescine-binding periplasmic protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 407
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/236 (38%), Positives = 128/236 (54%), Gaps = 24/236 (10%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VIAY++ F + NL P DW DLWR +L RI+++N+PREVIG LK +G SYN+ ++
Sbjct: 188 VIAYRRDIFEQRNLQPPTDWSDLWRKDLRRRIALLNNPREVIGLTLKKLGKSYNTEDL-- 245
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
++QQ L LL Q + + ST YL+ + DVW+AVGWS+DVLP ++R +A +
Sbjct: 246 ---ASVPTLQQELNLLQEQVKYYSSTSYLQPLLLDDVWLAVGWSTDVLPLMQRSRQIAAI 302
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
P+SG +L ADLW PA + P+ + QWIEFC QT A
Sbjct: 303 APRSGTALSADLWVHPAMTSTAL---------PAAAL-QWIEFCWQTKIATQL------S 346
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
+ A+ +L+ P+ L +Q + +P +IL EFL PLSE Y
Sbjct: 347 LATWAVSPSLIGTPDTQLL---AQFRDYPALLPNIDILQASEFLLPLSETATKQYR 399
>gi|434391078|ref|YP_007126025.1| periplasmic polyamine-binding protein of ABC transporter
[Gloeocapsa sp. PCC 7428]
gi|428262919|gb|AFZ28865.1| periplasmic polyamine-binding protein of ABC transporter
[Gloeocapsa sp. PCC 7428]
Length = 378
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 96/238 (40%), Positives = 125/238 (52%), Gaps = 35/238 (14%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VI Y + KF P DW DLWRPEL RIS+V+ REVIG LK +G SYN+ N+D
Sbjct: 164 VILYNREKFNSLGWTP-NDWSDLWRPELRSRISIVDQSREVIGLTLKRLGQSYNAQNLD- 221
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
Q+ ++++ L L Q RL+ S Y++ IGD WVAVGWS+DVLP ++R +AVV
Sbjct: 222 QIP----NLEEQLQALHQQVRLYSSNRYIEPLIIGDTWVAVGWSTDVLPILRRYREIAVV 277
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCL--QTARALPFKQEVI 179
VP+SG +LWAD+W P + L T L QWI+FC Q A+ + +
Sbjct: 278 VPRSGTALWADVWVNPINAALPT------------LASQWIDFCWQPQIAQQISLRTH-- 323
Query: 180 PGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
G SP A V+LP P+ N L + EFL PLS YE
Sbjct: 324 -GTSPIA-----VQLP-------PASGQNPTRIEFTDAQLQQSEFLLPLSATAQHQYE 368
>gi|428774536|ref|YP_007166324.1| extracellular solute-binding protein [Cyanobacterium stanieri PCC
7202]
gi|428688815|gb|AFZ48675.1| extracellular solute-binding protein family 1 [Cyanobacterium
stanieri PCC 7202]
Length = 378
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 132/237 (55%), Gaps = 36/237 (15%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
+IAY++ K P +DW DLWR EL +IS+++ PRE+IG +LK +G SYN+NNI
Sbjct: 167 MIAYREDKIAPLGFTP-KDWSDLWRVELMNQISLLSQPREIIGLILKKLGYSYNTNNIQ- 224
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
++ V + L L NQ + +DST+YL+ GD W+AVGWS+D+LP +++ N+ V
Sbjct: 225 EIE----DVYRELTTLNNQVKFYDSTNYLQPLINGDTWLAVGWSTDILPVLEQHRNIRAV 280
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQ--TARALPFKQEVI 179
+P+SG SLWAD+W P + L +++G I++WI +C Q +A + F
Sbjct: 281 IPESGTSLWADIWVQPYENNLSEEKLGE--------IYRWINYCWQEDSATRINF---FT 329
Query: 180 PGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDY 236
G SP +L + + + + EI A+ EF+EPL E ++ Y
Sbjct: 330 KGNSP-------------ILSAENANNRLQM----SEEIFAKSEFIEPLPETIMAQY 369
>gi|440681216|ref|YP_007156011.1| extracellular solute-binding protein family 1 [Anabaena cylindrica
PCC 7122]
gi|428678335|gb|AFZ57101.1| extracellular solute-binding protein family 1 [Anabaena cylindrica
PCC 7122]
Length = 383
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/236 (38%), Positives = 126/236 (53%), Gaps = 29/236 (12%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VI Y + KF+K + P +DW DLWR EL IS++N PRE+IG VLK +G SYN+ N+D
Sbjct: 167 VIVYNREKFQKLDWQP-KDWSDLWRSELRSHISLLNHPREIIGLVLKKLGQSYNTENLD- 224
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
Q+ S++ L L Q + +DST YL+ GD W+AVGWS+DV+P + R + V
Sbjct: 225 QIP----SLEAELKALNQQVKFYDSTTYLEPLITGDTWLAVGWSNDVIPLLSRYPKLTAV 280
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
+P+SG ++WADLW PA + R L QWI+FC Q A +
Sbjct: 281 IPQSGTAIWADLWVSPAG-------VDKRA-----LASQWIDFCWQPNIAKKIA-VLTKT 327
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
SP A + ++L NL++ P E+ + EFL PLS A YE
Sbjct: 328 NSPIAKNIVAADIQKQL--------ENLLLTNP--EVFDKSEFLLPLSPAATKQYE 373
>gi|307153205|ref|YP_003888589.1| extracellular solute-binding protein [Cyanothece sp. PCC 7822]
gi|306983433|gb|ADN15314.1| extracellular solute-binding protein family 1 [Cyanothece sp. PCC
7822]
Length = 383
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 130/236 (55%), Gaps = 26/236 (11%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
+IAY+K +K P +DW DLWR ++ RIS+++ PREVIG LK +G SYNS+NI+
Sbjct: 162 MIAYRKDNLKKLGWEP-KDWGDLWREDVRNRISLLDQPREVIGLTLKKLGYSYNSDNIN- 219
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
Q+ +++ +L L QA+ + S HYL+ +GD W+AVGWS +++P +K ++A V
Sbjct: 220 QIP----NLKSDLVALNKQAKFYSSDHYLEPLILGDTWLAVGWSHEIIPLLKNYRDIAAV 275
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
VP+SG +LWAD+W PAA V PS + WI FC Q+ A
Sbjct: 276 VPQSGTALWADIWVKPAA-----------VIKPSKFVQDWINFCWQSKSAKEISL-FTDA 323
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
SP LE LP+ + +D L+ + IL + +F++PL + YE
Sbjct: 324 VSPVILELAPENLPQAI------RDNPLL--LIDKNILEKSDFIKPLPASVEKQYE 371
>gi|354567783|ref|ZP_08986951.1| extracellular solute-binding protein family 1 [Fischerella sp.
JSC-11]
gi|353542241|gb|EHC11705.1| extracellular solute-binding protein family 1 [Fischerella sp.
JSC-11]
Length = 382
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 131/245 (53%), Gaps = 33/245 (13%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VI Y++ KF++ P DW DLWR EL RIS++N PREVIG VLK +G SYN+ N+D
Sbjct: 168 VIVYRRDKFQQLGWTPT-DWSDLWRTELRDRISLLNHPREVIGLVLKKLGKSYNTENLD- 225
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ G ++ L L Q + +DST YL+ IGD W+AVGWS DVLP V R +AVV
Sbjct: 226 AIPG----LEAELRALNQQVKFYDSTRYLEPLIIGDTWLAVGWSDDVLPVVTRYPQLAVV 281
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
P SG +LWAD+W P + L ++WI+FC Q A +Q I
Sbjct: 282 TPLSGTALWADVWVKPMGI------------NQANLAYKWIDFCWQPNIA---EQIFILT 326
Query: 182 ASPSALETTL--VKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
+ S + T + + E++ + D EIL + EFL+PL A + Y+ +
Sbjct: 327 KTNSPIPTNIRASNIQEQIRNFLLNND----------EILGKSEFLQPLPLAVAAQYKSI 376
Query: 240 VADLQ 244
A ++
Sbjct: 377 FAKIK 381
>gi|254413480|ref|ZP_05027250.1| hypothetical protein MC7420_6059 [Coleofasciculus chthonoplastes
PCC 7420]
gi|196179587|gb|EDX74581.1| hypothetical protein MC7420_6059 [Coleofasciculus chthonoplastes
PCC 7420]
Length = 397
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/241 (37%), Positives = 126/241 (52%), Gaps = 27/241 (11%)
Query: 1 MVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID 60
+VIAY++ KF + P DW DLWRPEL RIS+++SPREVIG LK +G SY++ N+
Sbjct: 166 VVIAYRRDKFEELGWTPT-DWSDLWRPELRDRISLLDSPREVIGLTLKKLGFSYDTANLS 224
Query: 61 LQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAV 120
QV K L L Q +L+ S HYL+ +GD W+AVGWS+D+L R +
Sbjct: 225 -QVPNLKT----ELLDLHKQVKLYSSDHYLEPLVLGDTWLAVGWSTDILSLRGRDRQIQA 279
Query: 121 VVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSP-----LIHQWIEFCLQTARALPFK 175
V+P+SG SLWAD+W PA + + P P L QWI+FC + A+
Sbjct: 280 VIPRSGTSLWADVWVQPAVQKTAAE-------SPEPETSQSLTQQWIDFCWRQQSAIDIS 332
Query: 176 QEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSD 235
+ ASP + LP+ L + + + +P IL EFL PL + +
Sbjct: 333 L-LSHAASPILVTMNPATLPDSLRQSE--------ILLPEPSILEDSEFLYPLPQEAIEQ 383
Query: 236 Y 236
Y
Sbjct: 384 Y 384
>gi|282899638|ref|ZP_06307602.1| periplasmic polyamine-binding protein of ABC transporter
[Cylindrospermopsis raciborskii CS-505]
gi|281195517|gb|EFA70450.1| periplasmic polyamine-binding protein of ABC transporter
[Cylindrospermopsis raciborskii CS-505]
Length = 394
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/238 (38%), Positives = 136/238 (57%), Gaps = 28/238 (11%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
V+ Y + + +K N P DW DLWR +L RIS+ N PREVIG VLK +G SYN+ N +
Sbjct: 174 VLVYNQKQLQKFNWQP-RDWGDLWRSDLRSRISLPNHPREVIGLVLKKLGRSYNTVN-PV 231
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+++ I ++ L Q + +DST+YL+ GD W+AVGWS+D++P + R + V
Sbjct: 232 KISNLNIELES----LNQQVKFYDSTNYLEPLITGDTWLAVGWSNDIIPILSRYPQLRAV 287
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
+P+SG ++WADLW PA + L T++ LI QWI+FC Q A Q V+ G
Sbjct: 288 IPQSGTAIWADLWVQPANT-LMTEETDN-------LISQWIDFCWQPDIA---GQIVMLG 336
Query: 182 A--SPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
+P+ + T+ V +G NL+ E+L +CEFL+PLS +++ YE
Sbjct: 337 KTNTPTFINTSKV-------QGISDSIQNLL--AIEQELLEKCEFLKPLSLESINQYE 385
>gi|434397206|ref|YP_007131210.1| extracellular solute-binding protein family 1 [Stanieria
cyanosphaera PCC 7437]
gi|428268303|gb|AFZ34244.1| extracellular solute-binding protein family 1 [Stanieria
cyanosphaera PCC 7437]
Length = 383
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/239 (38%), Positives = 129/239 (53%), Gaps = 32/239 (13%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
+I Y++ KF+ + P +DW+DLW +L RIS+V+ PREVIG LK +G SYN+N+++
Sbjct: 165 IIVYRRDKFKDLDWQP-KDWQDLWHQDLRDRISIVDQPREVIGLTLKKLGYSYNTNDLN- 222
Query: 62 QVAGGKI-SVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAV 120
KI ++ LA L Q + + S HYL+ IGD W+AVGWS+D+LP KR SN+
Sbjct: 223 -----KIPNLSSELAALHQQIKFYSSDHYLEPLIIGDTWLAVGWSTDILPLSKRYSNLGF 277
Query: 121 VVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIP 180
VVP+SG S+WADLW P RL G + QWI FC R L Q +
Sbjct: 278 VVPQSGTSIWADLWVQP---RLAESNFGE--------LSQWINFCW---RPLAANQISLF 323
Query: 181 GASPSALETTL--VKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
+ S + T+ +LP++LL Q + + A EF+ PLS Y+
Sbjct: 324 TNAISPVTNTMKPTELPQDLLHNSIFQAS--------LKSFALSEFITPLSSQANQQYQ 374
>gi|119490051|ref|ZP_01622675.1| periplasmic polyamine-binding protein of ABC transporter [Lyngbya
sp. PCC 8106]
gi|119454203|gb|EAW35355.1| periplasmic polyamine-binding protein of ABC transporter [Lyngbya
sp. PCC 8106]
Length = 357
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/236 (38%), Positives = 128/236 (54%), Gaps = 26/236 (11%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY++ +F P +DW DLWR ++ +IS++N+PRE IG +LK +G+SYN ++DL
Sbjct: 134 IAYRREQFETLGWTP-QDWGDLWREDIRNQISVLNNPRETIGLILKKLGSSYNITDLDLV 192
Query: 63 VAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVV 122
V ++ L +L+DS YLK GD W+AVGWS+D R N+ VV+
Sbjct: 193 V-----DLEDEFRQLHRNIKLYDSNTYLKPLITGDTWLAVGWSTDFSEKFCRQHNIGVVI 247
Query: 123 PKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG- 181
P SG +LWAD+W P + K I PL QWI+FC + A + ++ G
Sbjct: 248 PTSGTALWADVWVQPTSE----KPISNL-----PLAQQWIDFCWKPEIAT--QMSILTGT 296
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
SP + +LPE L Q+ L+ P AEIL + EFL PL E+TL Y+
Sbjct: 297 TSPIVNQLQPSELPETL------QNNPLL--FPKAEILEQSEFLLPLPESTLKQYQ 344
>gi|300869610|ref|ZP_07114190.1| Periplasmic polyamine-binding protein of ABC transporter
[Oscillatoria sp. PCC 6506]
gi|300332388|emb|CBN59390.1| Periplasmic polyamine-binding protein of ABC transporter
[Oscillatoria sp. PCC 6506]
Length = 349
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 127/235 (54%), Gaps = 24/235 (10%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VI Y+ KF+ L P DW DLWR EL RIS++++PREVIG LK +G SYN+ +++
Sbjct: 126 VIVYRIDKFKSLGLKPPTDWSDLWREELRDRISLLDNPREVIGLTLKKLGKSYNTRDLN- 184
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+VA ++++ L+ L Q +L+ S YL+ +GD W AVGWS DVL ++ + V
Sbjct: 185 KVA----NLKEELSNLHRQTKLYSSNSYLQPLVLGDTWAAVGWSGDVLRLMQNQKEIGAV 240
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
VP SG S+W DLW P +++ L+ QWI+FC Q A +
Sbjct: 241 VPISGTSMWVDLWVQPVSNQ----------SSNLSLVEQWIDFCWQPQIATQMSL-LTQA 289
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDY 236
+SP + LPE+L + + +P +E++++ EFL PL + + Y
Sbjct: 290 SSPVIISMKREDLPEQLRINR--------LLLPESEVISKSEFLFPLPDVAIEQY 336
>gi|428207943|ref|YP_007092296.1| extracellular solute-binding protein [Chroococcidiopsis thermalis
PCC 7203]
gi|428009864|gb|AFY88427.1| extracellular solute-binding protein family 1 [Chroococcidiopsis
thermalis PCC 7203]
Length = 398
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/236 (38%), Positives = 131/236 (55%), Gaps = 28/236 (11%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VIAY + KF+ N P +DW DLWR EL RIS+ N PREVIG LKY+G SYN+ N
Sbjct: 171 VIAYNRDKFQSLNWKP-QDWGDLWREELRDRISLPNHPREVIGLTLKYLGKSYNTENPS- 228
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
QV ++VQ L L Q +L+ S YL+ +GD W+AVGWS+D++P ++R +A +
Sbjct: 229 QVP--DLTVQ--LNRLQPQVKLYSSDTYLQPLILGDTWLAVGWSNDIIPVMQRHRQIAAI 284
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
+P+SG SLWADLWA P + + L +QWI+FC Q A +Q ++ G
Sbjct: 285 IPQSGTSLWADLWANPIQANSDRA-----------LEYQWIDFCWQPQIA---RQILLFG 330
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
+ S + + PE + Q + VP IL + EFL PL+ + ++
Sbjct: 331 RTNSPIPFQID--PENI------QAELRPLLVPNDNILDKSEFLRPLTPDAIQQHQ 378
>gi|428204536|ref|YP_007083125.1| spermidine/putrescine-binding periplasmic protein [Pleurocapsa sp.
PCC 7327]
gi|427981968|gb|AFY79568.1| spermidine/putrescine-binding periplasmic protein [Pleurocapsa sp.
PCC 7327]
Length = 399
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 130/237 (54%), Gaps = 25/237 (10%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
+IAY++ +F K P DW DLWR EL RIS+++ PREVIG LK + SYNS +++
Sbjct: 166 LIAYRQEEFEKLGWLPT-DWGDLWREELRDRISLLDQPREVIGLTLKKLKHSYNSQDLN- 223
Query: 62 QVAGGKI-SVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAV 120
KI +++ L L Q + + S YL+ +GD W+AVGWSSD+L +R +
Sbjct: 224 -----KIPNLKSELLSLHRQVKFYSSDRYLQPLILGDTWLAVGWSSDILALTERYRTIKA 278
Query: 121 VVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIP 180
V+P+SG SLWAD+W PA+ + + + + L+ QWI+FC QT A
Sbjct: 279 VIPRSGTSLWADIWVQPASVQETSDR--------TSLLKQWIDFCWQTQSANQISL-FTN 329
Query: 181 GASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
ASP L +L +++ K N ++ + P +IL +CEFL PL +YE
Sbjct: 330 AASPIVLNLKADELSKDIRK-------NPLLLIEP-QILDKCEFLYPLPAQVQKEYE 378
>gi|334121096|ref|ZP_08495171.1| extracellular solute-binding protein family 1 [Microcoleus
vaginatus FGP-2]
gi|333455585|gb|EGK84231.1| extracellular solute-binding protein family 1 [Microcoleus
vaginatus FGP-2]
Length = 369
Score = 146 bits (369), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 92/244 (37%), Positives = 135/244 (55%), Gaps = 27/244 (11%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VIAY+ KF+ P DWKDLWR EL RIS+ +S REVIG LK +G SYN+ +D
Sbjct: 149 VIAYRTDKFKALGWTPT-DWKDLWRSELRDRISLPDSAREVIGLTLKKLGKSYNTQQLD- 206
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
QV +V++ L L Q +L+ S YL+ +GD W+AVG S D+LP ++ ++A+V
Sbjct: 207 QVP----NVKKELENLHQQVKLYSSDAYLQPLILGDTWLAVGSSGDLLPLLQTQKDIALV 262
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
+P SG +LW DLW PA+ P L+ +WI+FCLQ R P +
Sbjct: 263 IPVSGTALWTDLWVEPASG------------NPVSLVEEWIDFCLQ-PRVAPQLSLLAKA 309
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVA 241
+SP + LPE + TN ++ +P A+ILA +FL P +A ++ Y L
Sbjct: 310 SSPIIIGMKPEDLPEAV-------RTNSVL-LPDAKILAASDFLLPFGDAGIAQYRSLWQ 361
Query: 242 DLQK 245
++++
Sbjct: 362 EIRQ 365
>gi|17227795|ref|NP_484343.1| periplasmic polyamine-binding protein of ABC transporter [Nostoc
sp. PCC 7120]
gi|17135277|dbj|BAB77823.1| periplasmic polyamine-binding protein of ABC transporter [Nostoc
sp. PCC 7120]
Length = 388
Score = 146 bits (369), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 128/245 (52%), Gaps = 33/245 (13%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VI Y + KF+K P +DW DLWR EL RIS+++ PRE+IG VLK +G SYN+ N+
Sbjct: 174 VIVYDREKFKKLGWIP-QDWSDLWRSELRSRISVLDQPREIIGLVLKKLGKSYNTENL-- 230
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+++ L Q +++ S YL+ +GD W+AVGWSSD++P + R ++VV
Sbjct: 231 ---ATVPDLEKELQTFNQQVKIYSSNTYLEPLILGDTWLAVGWSSDLIPVLARYPQLSVV 287
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQ--TARALPFKQEVI 179
+P+SG S+WADLW P ET + G L QWI+FCLQ AR + +
Sbjct: 288 IPRSGTSIWADLWVSPK----ETAKDG--------LSSQWIDFCLQPNIARQIAL---LT 332
Query: 180 PGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
SP A + E L L + E+ A+ EFL PLS YE L
Sbjct: 333 KTNSPVATNIGTADIQESL--------GGLFLN--SQEVFAKGEFLLPLSPEATKQYEAL 382
Query: 240 VADLQ 244
A ++
Sbjct: 383 FAKIK 387
>gi|428778824|ref|YP_007170610.1| spermidine/putrescine-binding periplasmic protein [Dactylococcopsis
salina PCC 8305]
gi|428693103|gb|AFZ49253.1| spermidine/putrescine-binding periplasmic protein [Dactylococcopsis
salina PCC 8305]
Length = 369
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 123/236 (52%), Gaps = 25/236 (10%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VIAY++ +FR+ P DW DLWR EL RIS++N PREVIG LK +G SYN+ ++D
Sbjct: 150 VIAYREDRFRQAGYDPPTDWGDLWREELRDRISLLNQPREVIGLTLKKLGFSYNTPDLD- 208
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
++ K + L L Q + + S YL+ + D WVAVGWS+D+L R ++ +
Sbjct: 209 SISDLKTA----LKTLNQQVKFYSSQSYLQPLILEDTWVAVGWSNDLLQLRTRYPDIKTI 264
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
+P+SG +LWADLW P + S I QWI+FCL A
Sbjct: 265 IPRSGTALWADLWVNPTGN-----------EAISEAILQWIDFCLNPKAANQIGI-FTNA 312
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
+SP + K+P+ L + K + P +E+L + EFL PLS T Y+
Sbjct: 313 SSPIFINANRDKIPKSLGEDK--------IKNPSSEVLEKSEFLLPLSPKTEEQYQ 360
>gi|218248017|ref|YP_002373388.1| periplasmic polyamine-binding protein [Cyanothece sp. PCC 8801]
gi|218168495|gb|ACK67232.1| periplasmic polyamine-binding protein [Cyanothece sp. PCC 8801]
Length = 391
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 128/236 (54%), Gaps = 25/236 (10%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
+IAY +F K P +DW DLWR EL RI++V+ PREVIG LK +G SYN+ ++
Sbjct: 169 LIAYDSHRFEKLGWTP-KDWSDLWREELRDRIALVDQPREVIGLTLKKLGYSYNTTDLS- 226
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
QV+ S+ L L Q + + S HYL+ +GD W++VGWSSD++P V N+ V
Sbjct: 227 QVS----SLTSELLALHKQVKYYSSDHYLQPLVVGDAWLSVGWSSDIIPLVNSNRNIKAV 282
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
VP SG +LW+D+W P + ETK S L QW++FC Q +A+ + G
Sbjct: 283 VPASGTALWSDVWVNPKVKQGETKL--------SELTKQWLDFCWQD-QAVNQICLLTDG 333
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
SP + +LP E+ +D L+ I+ +C+F+EPL +YE
Sbjct: 334 VSPMIYQAK--ELPSEV------KDNPLL--FIDQRIMDKCDFIEPLPLKVKQEYE 379
>gi|427731993|ref|YP_007078230.1| spermidine/putrescine-binding periplasmic protein [Nostoc sp. PCC
7524]
gi|427367912|gb|AFY50633.1| spermidine/putrescine-binding periplasmic protein [Nostoc sp. PCC
7524]
Length = 382
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 131/243 (53%), Gaps = 28/243 (11%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VI Y + KF+ P +DW DLWR E+ R S+++ PREVIG VLK +G SYN+ N+D
Sbjct: 167 VIVYNQDKFKDLGWMP-QDWSDLWREEMRSRFSLLDHPREVIGLVLKKLGKSYNTENLD- 224
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
++Q L L QA+ + S YL+ IGD W+AVGWS+DV+P + R + ++
Sbjct: 225 ----AVPQLEQELRTLNQQAKFYSSNTYLQPLIIGDTWLAVGWSNDVVPILSRYPQMKMI 280
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
+P+SG ++WADLW P + + L QWI+FC Q A KQ V+
Sbjct: 281 IPRSGTAIWADLWVSPKGANQDDN-----------LSSQWIDFCWQPNIA---KQIVVRT 326
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVA 241
S S + T + ++ ++G + +L++ E+ + EFL PL T YE L
Sbjct: 327 KSNSPIPTNIA---DDDIQGSFA---SLLLN--NQEVFDKSEFLLPLQLTTAKQYESLFN 378
Query: 242 DLQ 244
+++
Sbjct: 379 NIK 381
>gi|186683650|ref|YP_001866846.1| extracellular solute-binding protein [Nostoc punctiforme PCC 73102]
gi|186466102|gb|ACC81903.1| extracellular solute-binding protein, family 1 [Nostoc punctiforme
PCC 73102]
Length = 385
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 130/244 (53%), Gaps = 31/244 (12%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VI Y + KFR+ P +DW DLWR + RIS++N PREVIG VLK +G SYN+ N+D
Sbjct: 171 VIVYNRDKFRELGWTP-KDWSDLWRDGMQQRISLLNQPREVIGLVLKKLGKSYNTENLD- 228
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
QV ++++ L L Q + + S +YL+ +GD W+AVGWSSDVL + R + V
Sbjct: 229 QVP----NLEKELQTLNQQVKFYSSNNYLEPLIMGDTWLAVGWSSDVLQVLGRYPQLGAV 284
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
+P+SG ++WADLW PA T L QWI+FC Q + A KQ +
Sbjct: 285 IPQSGTAMWADLWVRPAGINKGT------------LSDQWIDFCWQPSIA---KQISVLT 329
Query: 182 ASPSALETTLVKLP-EELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLV 240
S S + T + +E ++ D E+L + EFL PL + + YE L
Sbjct: 330 KSNSPISTNIAASDIQEPVRSLLQSD---------REVLDKSEFLLPLPPSAIKQYESLF 380
Query: 241 ADLQ 244
A ++
Sbjct: 381 AKMK 384
>gi|257060659|ref|YP_003138547.1| hypothetical protein Cyan8802_2862 [Cyanothece sp. PCC 8802]
gi|256590825|gb|ACV01712.1| conserved hypothetical protein [Cyanothece sp. PCC 8802]
Length = 391
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 128/236 (54%), Gaps = 25/236 (10%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
+IAY +F K P +DW DLWR EL RI++V+ PREVIG LK +G SYN+ ++
Sbjct: 169 LIAYDSHRFEKLGWTP-KDWSDLWREELRDRIALVDQPREVIGLTLKKLGYSYNTTDLS- 226
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
QV+ S+ L L Q + + S HYL+ +GD W++VGWSSD++P V N+ V
Sbjct: 227 QVS----SLTSELLALHKQVKYYSSDHYLQPLVVGDAWLSVGWSSDIIPLVNSNRNIKAV 282
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
VP SG +LW+D+W P + +TK S L QW++FC Q +A+ + G
Sbjct: 283 VPASGTALWSDVWVNPKVKQGDTKL--------SELTKQWLDFCWQD-QAVNQICLLTDG 333
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
SP + +LP E+ +D L+ I+ +C+F+EPL +YE
Sbjct: 334 VSPMIYQAK--ELPSEV------KDNPLL--FIDQRIMDKCDFIEPLPLKVKQEYE 379
>gi|428317919|ref|YP_007115801.1| extracellular solute-binding protein family 1 [Oscillatoria
nigro-viridis PCC 7112]
gi|428241599|gb|AFZ07385.1| extracellular solute-binding protein family 1 [Oscillatoria
nigro-viridis PCC 7112]
Length = 369
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 130/236 (55%), Gaps = 27/236 (11%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VIAY+ KF+ P DWKDLWR EL RIS+ +S REVIG LK +G SYN+ +D
Sbjct: 149 VIAYRTDKFKALGWTPT-DWKDLWRSELRDRISLPDSAREVIGLTLKKLGKSYNTQQLD- 206
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+V ++++ LA L Q + + S YL+ +GD W+AVG S D+LP ++ ++A+V
Sbjct: 207 RVP----NLKKELANLHRQVKFYSSDAYLQPLILGDTWLAVGSSGDLLPLLQTQKDIALV 262
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
+P SG +LW DLW PA+ P L+ +WI+FCLQ R P +
Sbjct: 263 IPVSGTALWTDLWVEPASG------------NPVSLVDKWIDFCLQ-PRIAPQLSLLAKA 309
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
+SP + LPE + TN ++ +P A+ILA +FL P +A ++ Y
Sbjct: 310 SSPIIVGMKPEDLPEAV-------RTNSVL-LPDAKILAASDFLLPFGDAGIAQYR 357
>gi|75909270|ref|YP_323566.1| periplasmic polyamine-binding protein of ABC transporter [Anabaena
variabilis ATCC 29413]
gi|75702995|gb|ABA22671.1| periplasmic polyamine-binding protein of ABC transporter [Anabaena
variabilis ATCC 29413]
Length = 388
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 126/245 (51%), Gaps = 33/245 (13%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VI Y + KF+K P +DW DLWR EL RIS+++ PREVIG VLK +G SYN N+
Sbjct: 174 VIVYDREKFKKLGWTP-QDWSDLWRNELRSRISLLDQPREVIGLVLKKLGKSYNIENL-- 230
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+++ L L Q + + S YL+ IGD W+AVGWSSDV+P + R +++V
Sbjct: 231 ---ATVPDLEKELQTLNQQVKFYSSNTYLEPLIIGDTWLAVGWSSDVIPVLARYPQLSLV 287
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQ--TARALPFKQEVI 179
+P+SG S+WADLW P K+I L QWI+FCLQ AR + +
Sbjct: 288 IPRSGTSIWADLWVSP-------KEITQ-----DALSSQWIDFCLQPNIARQIAL---LT 332
Query: 180 PGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
SP + E L +L++ E+ A+ EFL PL YE L
Sbjct: 333 KTNSPVVTNIGTADIQESL--------GSLLLN--SQEVFAKGEFLLPLPPEATKQYEAL 382
Query: 240 VADLQ 244
A ++
Sbjct: 383 FAKIK 387
>gi|218438983|ref|YP_002377312.1| periplasmic polyamine-binding protein [Cyanothece sp. PCC 7424]
gi|218171711|gb|ACK70444.1| periplasmic polyamine-binding protein [Cyanothece sp. PCC 7424]
Length = 384
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 130/237 (54%), Gaps = 28/237 (11%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
+I Y+ +K + P DW DLWR EL GRIS++N PREVIG LK +G SYN+ NI L
Sbjct: 164 MIVYRSDILKKFDWQPT-DWSDLWREELQGRISLLNQPREVIGLTLKKLGYSYNTQNISL 222
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+++ L L Q +++ S +YL+ +GD+W+AVGWS++++P + R ++ +
Sbjct: 223 -----IPNLKSELFALNKQTKIYSSNYYLQPLILGDIWLAVGWSNEIIPLLSRRRDLKAI 277
Query: 122 VPKSGASLWADLWAIPAAS-RLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIP 180
VP+SG +LWAD+W P + +L S L +WI FC Q A+
Sbjct: 278 VPQSGTALWADVWVKPTSDVKL------------SNLAQEWINFCWQPT-AVQQISLYTD 324
Query: 181 GASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
SP L+ KLP+ +L N ++ + P IL + EF++PL ++ + YE
Sbjct: 325 AVSPLILDQNSEKLPKPIL-------NNPLLFIEPT-ILNKSEFIKPLPPSSQAQYE 373
>gi|443313248|ref|ZP_21042860.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 7509]
gi|442776653|gb|ELR86934.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 7509]
Length = 383
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 125/236 (52%), Gaps = 28/236 (11%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VIAY + KF P +W DLWR EL RIS+ N PREVIG LK +G SYNS N+
Sbjct: 168 VIAYNRKKFESLGWTPT-NWSDLWREELRSRISLPNQPREVIGLTLKKLGYSYNSQNLQ- 225
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
QV+ + L L Q + + S Y++ +GD W+AVGWSSDV+P ++R +A +
Sbjct: 226 QVS----QLADQLKTLHQQVKFYSSDRYMEPLILGDTWLAVGWSSDVIPVIQRYQEIAAI 281
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
VP+SG+++WAD+W P S + L QWI+FC LP Q+ I
Sbjct: 282 VPQSGSAIWADVWVSPTKSPVNKL-----------LAKQWIDFCW-----LPQSQKQISI 325
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
S + + P ++ +G NL++ +E A+ EFL PL + T+ Y+
Sbjct: 326 LSKALSPIEIDINPTDVQEGL----RNLLLV--KSETFAQSEFLLPLPKETMQQYK 375
>gi|384250495|gb|EIE23974.1| periplasmic binding protein-like II, partial [Coccomyxa
subellipsoidea C-169]
Length = 310
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 113/186 (60%), Gaps = 9/186 (4%)
Query: 2 VIAYKKSKFRKHNLA--PIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNI 59
+IAY+KS + PI DW DL +P L R++ V+SPRE +G+ LK +G +N+
Sbjct: 130 LIAYRKSARARSAAGAHPIRDWGDLLQPCLRQRVAWVDSPREFVGAALKTLGGGFNTGAA 189
Query: 60 DLQVAG-GKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNV 118
+L G + Q + L Q R+F S ++KA G DVW VGWS D++PA +R +V
Sbjct: 190 ELASLGLSDQDLAQQVDRLRQQVRVFSSKEHIKALGAKDVWAVVGWSGDLVPAAERSGDV 249
Query: 119 AVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEV 178
+V P SG SLWAD+WA+P+ + Q G R+RGPSPL+ W+++ LQ +RA + + +
Sbjct: 250 VLVAPASGTSLWADMWAVPSHA-----QHGSRMRGPSPLLPAWLDYWLQPSRAA-WNRGL 303
Query: 179 IPGASP 184
GASP
Sbjct: 304 KSGASP 309
>gi|298492009|ref|YP_003722186.1| family 1 extracellular solute-binding protein ['Nostoc azollae'
0708]
gi|298233927|gb|ADI65063.1| extracellular solute-binding protein family 1 ['Nostoc azollae'
0708]
Length = 383
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/243 (37%), Positives = 125/243 (51%), Gaps = 30/243 (12%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VI Y KF+K + P +DW DLWR EL RIS++N PREVIG VLK +G SYN+ NI
Sbjct: 167 VIIYNGEKFQKFDWQP-KDWSDLWRSELRSRISLLNHPREVIGLVLKKLGESYNTENIT- 224
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
Q+ K L L Q + +DST YL+ GD W+AVGWS+DV+P + R + V
Sbjct: 225 QIPDLKAE----LLALHQQVKFYDSTTYLEPLLTGDTWLAVGWSNDVMPILSRYPKLTAV 280
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
+P+SG ++WADLW PA T L WI FC Q A KQ I
Sbjct: 281 IPQSGTAMWADLWVSPAEVEQNT------------LASDWINFCWQPNIA---KQIAILT 325
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVA 241
+ S + + + KP Q NL++ E+ + EFL PL + Y++L
Sbjct: 326 KNNSPITNIVASDLQ-----KPLQ--NLLLN--NQELFDKSEFLLPLPASVNKGYKYLFN 376
Query: 242 DLQ 244
++
Sbjct: 377 KIK 379
>gi|427717210|ref|YP_007065204.1| extracellular solute-binding protein [Calothrix sp. PCC 7507]
gi|427349646|gb|AFY32370.1| extracellular solute-binding protein family 1 [Calothrix sp. PCC
7507]
Length = 376
Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 129/245 (52%), Gaps = 33/245 (13%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VI Y + KF++ P DW DLWR E+ RIS++N PREVIG LK +G SYN+ N+D
Sbjct: 162 VIVYNRDKFKELGWTP-SDWGDLWREEVRSRISLLNQPREVIGLTLKKLGKSYNTENLD- 219
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
QV +++ L L Q + + ST YL+ D W+AV WS DV+P + R +A +
Sbjct: 220 QVP----DLEKELRRLNQQVKFYASTTYLEPLITEDTWLAVAWSDDVMPVLARYPQLAAI 275
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
+P+SG ++W DLW PA+ +T L QWI+FC Q A KQ +
Sbjct: 276 IPQSGTAVWVDLWVRPASVSKDT------------LSDQWIDFCWQPNIA---KQISLLT 320
Query: 182 ASPSALETTLV--KLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
S S + T +V ++ E+L NL++ E+ + EFL PL+ YE L
Sbjct: 321 KSNSPISTNIVASEIQEKL--------RNLLLS--NREVFDKSEFLLPLNSTASKQYESL 370
Query: 240 VADLQ 244
A ++
Sbjct: 371 FAKIK 375
>gi|220909337|ref|YP_002484648.1| ABC transporter periplasmic solute-binding protein [Cyanothece sp.
PCC 7425]
gi|219865948|gb|ACL46287.1| ABC transporter, periplasmic solute-binding protein [Cyanothece sp.
PCC 7425]
Length = 377
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/250 (36%), Positives = 131/250 (52%), Gaps = 37/250 (14%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VIAY+K KF + P DW+DLWR L R+S+++ PREVIG LK +G SYN+N
Sbjct: 158 VIAYRKDKFEQLGWLPA-DWQDLWRSPLRHRLSLLDHPREVIGLTLKKLGYSYNTN---- 212
Query: 62 QVAGGKIS-VQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAV 120
A KI+ +++ LA L QA + S YL+ +GD W AVGWS+DVLP ++R + V
Sbjct: 213 --APAKIADLERELAQLNRQALFYSSDTYLQPLVLGDTWAAVGWSTDVLPLMRRNDKIGV 270
Query: 121 VVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSP---LIHQWIEFCLQTARALPFKQE 177
+VP+SG +LWAD+W PA + P P L + W+++ Q A A Q
Sbjct: 271 IVPRSGTALWADVWVRPA------------LEIPPPAVALQNSWMDYWWQPAIANALSQ- 317
Query: 178 VIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
L L +L P++ L P + R EFL PLS+ + +Y+
Sbjct: 318 ---------FSDALSPLLTDLQPNGPAKKLLL----PDQPLFERSEFLLPLSKTAIEEYD 364
Query: 238 WLVADLQKPA 247
L +++P+
Sbjct: 365 TLWTQMRQPS 374
>gi|428220899|ref|YP_007105069.1| spermidine/putrescine-binding periplasmic protein [Synechococcus
sp. PCC 7502]
gi|427994239|gb|AFY72934.1| spermidine/putrescine-binding periplasmic protein [Synechococcus
sp. PCC 7502]
Length = 357
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 85/243 (34%), Positives = 122/243 (50%), Gaps = 30/243 (12%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY+ K PI W DLWR EL G+I++ N PREVIG LK +G SYN+ NI
Sbjct: 144 IAYRSDKLD----IPINGWADLWRTELKGKITLPNDPREVIGLTLKKLGYSYNTANIK-- 197
Query: 63 VAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVV 122
+ L L Q + S YL+ IGD W+AVGWS D++ ++ S++ VV+
Sbjct: 198 ---AIAPLTPALQALNQQVLTYTSDSYLQPLLIGDSWLAVGWSQDIVNTAEQNSDIKVVI 254
Query: 123 PKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGA 182
P G +LW+DLW P QI G W++ CL A A ++
Sbjct: 255 PAEGTALWSDLWVFPQRVNRPENQIFG---------QDWLDLCLTPAIA----NQITALT 301
Query: 183 SPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVAD 242
+A L KLP+ + T+ I+ PP +ILA+ E + PLSE + +Y+ L +
Sbjct: 302 DATATNPDLGKLPKSV--------TSNILKFPPDQILAKSELILPLSETSNQEYKQLWEN 353
Query: 243 LQK 245
L++
Sbjct: 354 LRQ 356
>gi|359457473|ref|ZP_09246036.1| ABC transporter periplasmic solute-binding protein [Acaryochloris
sp. CCMEE 5410]
Length = 371
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/241 (39%), Positives = 121/241 (50%), Gaps = 45/241 (18%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
+IA++K KFR P +DW DLWR EL G IS+ + PREVIG LK +G SYN ++D
Sbjct: 161 MIAFRKDKFRDLGWQP-QDWSDLWRSELKGHISLPDQPREVIGLTLKKLGQSYNLEDLD- 218
Query: 62 QVAGGKIS-VQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAV 120
IS + Q L L Q + S+ YL+ +GD W AVGWSSD+LPA+ R ++
Sbjct: 219 -----TISELPQTLKELNEQTLFYASSQYLEPLILGDTWAAVGWSSDILPALAREPDLDA 273
Query: 121 VVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA---LPFKQE 177
V+P SG++LWADLW Q+ PS I+QWI + + A F
Sbjct: 274 VLPASGSALWADLWV----------QV-----QPSETINQWINYWWEDTVANNLSKFTDT 318
Query: 178 VIPGASPSALETTL-VKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDY 236
+ P L TTL VK L P Q R EFL PLS +TL Y
Sbjct: 319 ISP-----LLSTTLPVKSQSHRLIAAPKQ-------------FERSEFLLPLSPSTLQQY 360
Query: 237 E 237
E
Sbjct: 361 E 361
>gi|67921536|ref|ZP_00515054.1| Twin-arginine translocation pathway signal [Crocosphaera watsonii
WH 8501]
gi|416384741|ref|ZP_11684684.1| periplasmic polyamine-binding protein of ABC transporter
[Crocosphaera watsonii WH 0003]
gi|67856648|gb|EAM51889.1| Twin-arginine translocation pathway signal [Crocosphaera watsonii
WH 8501]
gi|357264996|gb|EHJ13812.1| periplasmic polyamine-binding protein of ABC transporter
[Crocosphaera watsonii WH 0003]
Length = 387
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 130/237 (54%), Gaps = 30/237 (12%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
+IAY+ K + P +DW DLW L+ RISMVN PRE+IG LK +G SYN+ N++
Sbjct: 169 LIAYRSDKL---DWQP-QDWSDLWDERLSDRISMVNQPREIIGLTLKQLGKSYNTENLE- 223
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+V ++ L L + + + HYL+ +GDVWV+VGWS++++P + + N+ V
Sbjct: 224 EVP----ELKSELLNLNKRVKYYSDQHYLQPLVVGDVWVSVGWSNEIIPLMAKSPNIKAV 279
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCL--QTARALPFKQEVI 179
VP SG ++W+D+W P A ET+ S + QW+ FC Q AR + +
Sbjct: 280 VPTSGTAIWSDIWVKPKAKETETEL--------SEIAKQWLNFCWQPQAARLMSLFAD-- 329
Query: 180 PGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDY 236
ASP T+ K +EL +P N ++ + A I +C+FLEPLS+ + Y
Sbjct: 330 -AASPVI--NTIDK--DEL---EPDITNNPLLFIDSA-IFDKCDFLEPLSKQSKEQY 377
>gi|16331125|ref|NP_441853.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
gi|383322868|ref|YP_005383721.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. GT-I]
gi|383326037|ref|YP_005386890.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. PCC-P]
gi|383491921|ref|YP_005409597.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. PCC-N]
gi|384437189|ref|YP_005651913.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
gi|451815282|ref|YP_007451734.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
gi|1653619|dbj|BAA18531.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
gi|339274221|dbj|BAK50708.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
gi|359272187|dbj|BAL29706.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. GT-I]
gi|359275357|dbj|BAL32875.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. PCC-N]
gi|359278527|dbj|BAL36044.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803 substr. PCC-P]
gi|407961501|dbj|BAM54741.1| spermidine/putrescine-binding periplasmicprotein [Bacillus subtilis
BEST7613]
gi|451781251|gb|AGF52220.1| spermidine/putrescine-binding periplasmic protein [Synechocystis
sp. PCC 6803]
Length = 384
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 126/241 (52%), Gaps = 41/241 (17%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
+I Y++ F P DW DLWRPEL RI++V+ PRE IG LK +G SYN N
Sbjct: 171 MIIYRQQPFADLGWQPT-DWSDLWRPELKQRIALVDDPREAIGLTLKKLGYSYNVTNPKA 229
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
A + L LA Q + ++S +YL+A DVW+AVGWS+ ++P ++ S + V
Sbjct: 230 VNA-----LPSALQELATQVKFYNSKYYLQALLNKDVWLAVGWSNQIIPLLRNQSELRAV 284
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
+P SG SLWADLW +PA +E +I ++W+ F
Sbjct: 285 IPSSGTSLWADLWTMPA--EMEAAEI----------TYEWLNFS---------------- 316
Query: 182 ASPSALE-----TTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDY 236
A PS+LE + + +P + L+ + TN ++ P E+L RCEFL PL AT++ Y
Sbjct: 317 AQPSSLEQMATFSNALAVPYQNLEVS-ALSTNPLLAFSP-ELLERCEFLAPLDIATVNQY 374
Query: 237 E 237
+
Sbjct: 375 K 375
>gi|172036028|ref|YP_001802529.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. ATCC 51142]
gi|354552834|ref|ZP_08972141.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. ATCC 51472]
gi|171697482|gb|ACB50463.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. ATCC 51142]
gi|353554664|gb|EHC24053.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. ATCC 51472]
Length = 390
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 127/244 (52%), Gaps = 26/244 (10%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
+IAY+ K + P +DW DLW L+ RIS+V+ REV+G LK +G SYN+ +D
Sbjct: 169 LIAYRSDKL---DWQP-QDWSDLWDQRLSDRISVVDQYREVMGLTLKKLGQSYNTEKLD- 223
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
QV ++ L L Q + + S HYL+ +GDVWV+VGWS++++P V + N+ V
Sbjct: 224 QVP----QLKTELLALNQQVKYYSSDHYLQPLVVGDVWVSVGWSNEIIPLVTKNRNIKAV 279
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
VP SG S+W+D+W P A + K S QW+ FC Q +A
Sbjct: 280 VPTSGTSIWSDVWVKPKAKESQNKL--------SETAKQWLNFCWQ-PQAAKLISLFADA 330
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVA 241
ASP +L E++ N ++ + PA I +CEFL+PLS+ Y L
Sbjct: 331 ASPMIDRIDKKELSSEVI-------NNPLLFIDPA-IFEQCEFLQPLSKQVEEQYISLWQ 382
Query: 242 DLQK 245
D++K
Sbjct: 383 DVRK 386
>gi|434384916|ref|YP_007095527.1| spermidine/putrescine-binding periplasmic protein [Chamaesiphon
minutus PCC 6605]
gi|428015906|gb|AFY92000.1| spermidine/putrescine-binding periplasmic protein [Chamaesiphon
minutus PCC 6605]
Length = 403
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 128/240 (53%), Gaps = 16/240 (6%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VI Y++ K + N+ +DW DLW P+L RIS+++ REVIG LK +G SYN+ ++D
Sbjct: 168 VIIYRRDKLTEANIPLPQDWADLWNPQLRQRISLLDRSREVIGLTLKKLGYSYNAADLD- 226
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+++Q LA L Q + + + HYL+ IGD WVAVGWS D +++ + V
Sbjct: 227 ----RVLNLQTELAKLHQQVKFYSADHYLQPLVIGDTWVAVGWSLDASELIQKNPQIGAV 282
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPS--PLIHQWIEFCLQTARALPFKQEVI 179
VP+SG ++ ADLW P+ S + + + L ++WI+ CLQ + +
Sbjct: 283 VPRSGTAISADLWVQPSLSPKLSPANRALLSNSNRLKLSNKWIDHCLQPQSSNQIS-VLT 341
Query: 180 PGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
PGA+P +P ++ K ++ +P E+L + EF+ P+S T + ++ L
Sbjct: 342 PGAAPLLTNLNPNDIPPDVRKN--------LLTLPSKEVLDKSEFIYPVSPTTKAQFDRL 393
>gi|158338236|ref|YP_001519413.1| ABC transporter periplasmic solute-binding protein [Acaryochloris
marina MBIC11017]
gi|158308477|gb|ABW30094.1| ABC transporter, periplasmic solute-binding protein [Acaryochloris
marina MBIC11017]
Length = 371
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/241 (38%), Positives = 118/241 (48%), Gaps = 45/241 (18%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
+IA++K KFR P +DW DLWR EL IS+++ PREVIG LK +G SYN ++D
Sbjct: 161 MIAFRKDKFRDLGWQP-QDWSDLWRSELKEHISLLDQPREVIGLTLKKLGQSYNLEDLD- 218
Query: 62 QVAGGKIS-VQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAV 120
IS + Q L L Q + S+ YL+ +GD W AVGWSSD+LP + R ++
Sbjct: 219 -----TISELPQTLKELNEQTLFYASSQYLEPLILGDTWAAVGWSSDILPTLAREPDLEA 273
Query: 121 VVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA---LPFKQE 177
V P SG++LWADLW Q+ PS I+QWI + + A F
Sbjct: 274 VFPASGSALWADLWV----------QV-----QPSETINQWINYWWEDTVANNLSKFTDT 318
Query: 178 VIPGASPSALETTL-VKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDY 236
+ P L TTL VK L P Q R EFL PLS TL Y
Sbjct: 319 ISP-----LLSTTLPVKSQSHRLVAAPKQ-------------FERSEFLFPLSPPTLQQY 360
Query: 237 E 237
E
Sbjct: 361 E 361
>gi|427711348|ref|YP_007059972.1| spermidine/putrescine-binding periplasmic protein [Synechococcus
sp. PCC 6312]
gi|427375477|gb|AFY59429.1| spermidine/putrescine-binding periplasmic protein [Synechococcus
sp. PCC 6312]
Length = 354
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/133 (46%), Positives = 91/133 (68%), Gaps = 6/133 (4%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
V+AY+ + P +DW+DLW+PEL ++S++N PREVIG VLK +G SYN+ +I+
Sbjct: 142 VMAYRADLIQPTGWWP-QDWEDLWKPELTQKLSLLNQPREVIGLVLKKLGQSYNTADIN- 199
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
QV+G K ++++ L Q R F ST YL++ +GD W+A WS+D+LP + R SN+ +
Sbjct: 200 QVSGLKPALEE----LRQQTRFFASTDYLQSLIMGDTWIAQAWSTDILPILNRYSNIKAI 255
Query: 122 VPKSGASLWADLW 134
VPKSG +LWAD W
Sbjct: 256 VPKSGTALWADCW 268
>gi|170076941|ref|YP_001733579.1| periplasmic binding protein of ABC transporter [Synechococcus sp.
PCC 7002]
gi|169884610|gb|ACA98323.1| periplasmic binding protein of ABC transporter [Synechococcus sp.
PCC 7002]
Length = 377
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 99/183 (54%), Gaps = 18/183 (9%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
++ Y+K K + P DW DLWRPEL G+IS++N REV+G +LK G SYN + +
Sbjct: 161 MLVYRKDKLKNLGWTPT-DWADLWRPELQGKISLLNQSREVLGLLLKKQGKSYNETDPE- 218
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+++ + L Q + + STHYL+ +GD W+A GWS D+LP ++R N+ V
Sbjct: 219 ----AIANLESDFQTLHRQVKFYSSTHYLQPLNMGDTWIAQGWSQDILPLLQRYRNLGAV 274
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
+P SG +LW DLW P S+ + + W++FC + A A+ G
Sbjct: 275 IPASGTALWCDLWVQPQRSQTSFE-----------TLKTWLDFCWEPA-AIQQISRSSHG 322
Query: 182 ASP 184
ASP
Sbjct: 323 ASP 325
>gi|427724862|ref|YP_007072139.1| extracellular solute-binding protein [Leptolyngbya sp. PCC 7376]
gi|427356582|gb|AFY39305.1| extracellular solute-binding protein family 1 [Leptolyngbya sp. PCC
7376]
Length = 374
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 111/220 (50%), Gaps = 23/220 (10%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
++ Y+K K +K + + DW+DLWR EL +IS+++ REVIG VLK G SYN + +
Sbjct: 158 LLLYRKDKLKKFDWQ-LTDWEDLWREELKNKISLLDHSREVIGFVLKNFGFSYNDKDPEA 216
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+AG + + L LL + + STHYL+ GD WVA WS D L +KR N+ V
Sbjct: 217 -IAG----LSEELGLLHRNVKFYSSTHYLQPLITGDTWVAQAWSQDALSLMKRYRNLGAV 271
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
VPKSG +LW DLW P S E + W+EFC F Q
Sbjct: 272 VPKSGTALWCDLWVQPKKSEREFAD-----------LKPWLEFCANERAINQFAQSTF-A 319
Query: 182 ASP-----SALETTLVKLPEELLKGKPSQDTNLIVGVPPA 216
ASP L+ + + P + + Q++ +I +PP+
Sbjct: 320 ASPLIYQTENLDAKVTENPLIFVNPETYQNSEIIETLPPS 359
>gi|427706446|ref|YP_007048823.1| extracellular solute-binding protein [Nostoc sp. PCC 7107]
gi|427358951|gb|AFY41673.1| extracellular solute-binding protein [Nostoc sp. PCC 7107]
Length = 386
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 94/166 (56%), Gaps = 18/166 (10%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VI Y + KFR+ P +DW DLWR L IS++++PREVIG VLK G SYN+ N+D
Sbjct: 171 VIVYDRHKFRELGWQP-QDWSDLWRDGLRSHISLLDNPREVIGLVLKKFGKSYNTENLD- 228
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
++++ L L Q + + S YL+ GD W+AVGWSSDVLP + R + V
Sbjct: 229 ----TVPNLEKELQTLNQQVKFYSSNTYLEPLVTGDTWLAVGWSSDVLPLLSRYPQLNAV 284
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQ 167
+P+SG ++WADLW P + + + +WI+FC Q
Sbjct: 285 IPQSGTAIWADLWVRPTKA------------SKNDISSKWIDFCWQ 318
>gi|427419007|ref|ZP_18909190.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 7375]
gi|425761720|gb|EKV02573.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 7375]
Length = 380
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/244 (38%), Positives = 123/244 (50%), Gaps = 39/244 (15%)
Query: 1 MVIAYKKSKFRKH-NLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNI 59
++IAY+K F+ + N PI W DLWRPELAGRI+M N PR I VLK +G S N +
Sbjct: 166 LMIAYQKPIFQTNTNNKPITKWADLWRPELAGRIAMPNQPRLAIAIVLKALGYSVNDEAV 225
Query: 60 DLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVA 119
LQ VQ+ L L Q ++FDS YLKA DVW+AVGWS D+L + R +
Sbjct: 226 LLQ-----DDVQEQLLALYRQVKVFDSQAYLKALVNEDVWLAVGWSGDILATLVRYRRLG 280
Query: 120 VVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVI 179
V P+ G L +DLW P ++L + W+EFC Q +P E+
Sbjct: 281 AVHPQEGTVLTSDLWVAPTDAKLTEE------------AQAWMEFCWQ----MPIATEIS 324
Query: 180 P---GASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDY 236
G SPS VK+PE+L SQ T L+ G E L PLS+ ++
Sbjct: 325 VSSYGVSPSFFLPD-VKVPEQL-----SQQTLLVPG--------HGEVLLPLSKRGQTNV 370
Query: 237 EWLV 240
E L+
Sbjct: 371 ETLL 374
>gi|56751841|ref|YP_172542.1| polyamine ABC transporter periplasmic polyamine-binding protein
[Synechococcus elongatus PCC 6301]
gi|56686800|dbj|BAD80022.1| periplasmic polyamine-binding protein of ABC transporter
[Synechococcus elongatus PCC 6301]
Length = 342
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/229 (37%), Positives = 120/229 (52%), Gaps = 32/229 (13%)
Query: 10 FRKHNL-APIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKI 68
FR+ L +P++DW DLWRPEL G++ + + PREVIG LK +G SYN N+ +I
Sbjct: 134 FRRDRLTSPLQDWTDLWRPELRGQLILPDDPREVIGLTLKRLGWSYNQANL------AEI 187
Query: 69 -SVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGA 127
++ LA L Q +L+ S +YL+ +GD AVGWS+D+L A++R S +A VVP+SG
Sbjct: 188 PQLEPLLAALQQQVKLYSSRNYLQPLLLGDALAAVGWSADILAALRRDSRLAAVVPRSGT 247
Query: 128 SLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSAL 187
++W DLW P GRV +WI+F A F Q + P ASP+ L
Sbjct: 248 AIWLDLWVQPQ----------GRVS--EVFSDRWIDFGWAPTIATQFSQ-LGPAASPAIL 294
Query: 188 ETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDY 236
V + P Q +PP +L + E + PL EA Y
Sbjct: 295 TAAAVA----PVDANPLQ-------IPPTAVLDKSELILPLPEAVRDRY 332
>gi|81301075|ref|YP_401283.1| periplasmic polyamine-binding protein of ABC transporter
[Synechococcus elongatus PCC 7942]
gi|81169956|gb|ABB58296.1| periplasmic polyamine-binding protein of ABC transporter
[Synechococcus elongatus PCC 7942]
Length = 354
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/229 (37%), Positives = 120/229 (52%), Gaps = 32/229 (13%)
Query: 10 FRKHNL-APIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKI 68
FR+ L +P++DW DLWRPEL G++ + + PREVIG LK +G SYN N+ +I
Sbjct: 146 FRRDRLTSPLQDWTDLWRPELRGQLILPDDPREVIGLTLKRLGWSYNQANL------AEI 199
Query: 69 -SVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGA 127
++ LA L Q +L+ S +YL+ +GD AVGWS+D+L A++R S +A VVP+SG
Sbjct: 200 PQLEPLLAALQQQVKLYSSRNYLQPLLLGDALAAVGWSADILAALRRDSRLAAVVPRSGT 259
Query: 128 SLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSAL 187
++W DLW P GRV +WI+F A F Q + P ASP+ L
Sbjct: 260 AIWLDLWVQPQ----------GRVS--EVFSDRWIDFGWAPTIATQFSQ-LGPAASPAIL 306
Query: 188 ETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDY 236
V + P Q +PP +L + E + PL EA Y
Sbjct: 307 TAAAVA----PVDANPLQ-------IPPTAVLDKSELILPLPEAVRDRY 344
>gi|284929800|ref|YP_003422322.1| spermidine/putrescine-binding periplasmic protein [cyanobacterium
UCYN-A]
gi|284810244|gb|ADB95941.1| spermidine/putrescine-binding periplasmic protein [cyanobacterium
UCYN-A]
Length = 385
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 119/235 (50%), Gaps = 27/235 (11%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
+IAY+ K I+DW DLW P+L RIS+V+ PREVIG LK + SYN+ N+
Sbjct: 167 LIAYRADKLD----GEIKDWSDLWDPKLENRISLVDQPREVIGLTLKKLNKSYNTKNL-- 220
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
++ L Q + ++S +YL+ +G+VW +VGWS+D++P + R N+ V
Sbjct: 221 ---KNIPQLRSELQAFNKQVKYYNSQYYLQPLLMGEVWASVGWSNDIIPILSRNRNIKAV 277
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
+P SG SLW+D+W P + + T S + +WI FC + +
Sbjct: 278 IPSSGTSLWSDIWVAPKNNNISTL---------SEIAQRWINFCWE-PEMVNLISLFTNA 327
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDY 236
+SP +L E++ N ++ + P+ I +C+F+EPLS +Y
Sbjct: 328 SSPMINNLNNKQLFPEVI-------NNPLLCLQPS-IFNKCDFIEPLSIEEQKEY 374
>gi|443323260|ref|ZP_21052268.1| spermidine/putrescine-binding periplasmic protein [Gloeocapsa sp.
PCC 73106]
gi|442786998|gb|ELR96723.1| spermidine/putrescine-binding periplasmic protein [Gloeocapsa sp.
PCC 73106]
Length = 374
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 122/237 (51%), Gaps = 30/237 (12%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
+IAY+ + ++ + P +DW DLW+ L RIS+ REVIG LK +G SYN N+
Sbjct: 143 MIAYRSDRLKEVGIVP-QDWSDLWQSALKERISLPAHSREVIGLTLKKLGYSYNQTNL-- 199
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ + L L Q + + S YL+ GD W+AVGWS+D++P SN+ V
Sbjct: 200 ---AAIPELPKELERLNQQVKFYSSDAYLQPLIKGDTWLAVGWSTDIIPVANNYSNIEAV 256
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQ--TARALPFKQEVI 179
+P SG SLW DLW A ++ ++ LI WI+FC Q +A A+ +
Sbjct: 257 IPPSGTSLWVDLWVKSALTQPTAPEV--------ELIKGWIDFCWQPRSAEAISL---LT 305
Query: 180 PGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDY 236
ASP L + EL K KP + +P EIL++ EFL PL+ TL+++
Sbjct: 306 NAASPVILNAPVSG---ELTK-KP-------LVIPSPEILSKSEFLLPLNMETLAEH 351
>gi|126660470|ref|ZP_01731578.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. CCY0110]
gi|126618229|gb|EAZ88990.1| periplasmic polyamine-binding protein of ABC transporter
[Cyanothece sp. CCY0110]
Length = 387
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 118/235 (50%), Gaps = 26/235 (11%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
+IAY+ K + P +DW DLW L+ RISMV+ REVIG LKY+G SYN+ N+
Sbjct: 169 LIAYRSDKL---DWQP-QDWSDLWDQRLSDRISMVDQYREVIGLTLKYLGHSYNTENL-A 223
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
QV ++ L L Q + + S HYL+ +GDV V+VGWS++++P + + N+ V
Sbjct: 224 QVP----QLKTELLALNEQVKYYSSDHYLQPLLVGDVDVSVGWSNEIIPLITKNRNIKAV 279
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
VP SG SLW+D+W P + + S QW+ FC Q +A
Sbjct: 280 VPTSGTSLWSDIWVKPKVKEGQNEL--------SETAKQWLNFCWQ-PQAAKIISLFADA 330
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDY 236
ASP ++ E++ N ++ + I +CEFLEPLS Y
Sbjct: 331 ASPMIDRIDKKEVSPEIM-------NNPLLFIDET-IFEQCEFLEPLSTEVQEQY 377
>gi|145355770|ref|XP_001422123.1| ABC(binding protein) family transporter: polyamine [Ostreococcus
lucimarinus CCE9901]
gi|144582363|gb|ABP00440.1| ABC(binding protein) family transporter: polyamine [Ostreococcus
lucimarinus CCE9901]
Length = 388
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 124/241 (51%), Gaps = 18/241 (7%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
VIAY+K K K + P DW+DL+ P L G I M N+PR V+ + LK G S N++ D+
Sbjct: 150 VIAYRKDKLPK-GVKPPRDWEDLFDPRLKGLIGMPNAPRLVLSAALKAEGMSANAS--DI 206
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
A G++S + + L ++FD Y +A GD V +G S DV +R + + +
Sbjct: 207 GGADGRVSAR--VRALRENVKVFDDLQYTQAIACGDCAVVIGPSEDVFSVARRSTLIGLA 264
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
VP SG +LW+D W +P A+ + + GPSP++ QWI++ LQ AR + + + G
Sbjct: 265 VPSSGTTLWSDCWVVPTAT------VANKGGGPSPVLEQWIDYTLQPAR-VNMRVGLKGG 317
Query: 182 ASP-----SALETTLVKLPEELLKGKPSQDTNLIVG-VPPAEILARCEFLEPLSEATLSD 235
SP ++ + P S D +++ G +P + + EF PLS+ +
Sbjct: 318 ISPLMFDGRGVDGGYARYPNVARPVLGSDDGDMLKGWIPDDSVWSASEFQLPLSDRARAQ 377
Query: 236 Y 236
Y
Sbjct: 378 Y 378
>gi|428217472|ref|YP_007101937.1| extracellular solute-binding protein [Pseudanabaena sp. PCC 7367]
gi|427989254|gb|AFY69509.1| extracellular solute-binding protein family 1 [Pseudanabaena sp.
PCC 7367]
Length = 419
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 122/247 (49%), Gaps = 34/247 (13%)
Query: 2 VIAYK--KSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNI 59
VIAY+ ++KF I+ W DLWRPEL RI + +SPREVIG VLK +G SYN+ N+
Sbjct: 203 VIAYRPDRTKFE------IKSWADLWRPELKRRIVLPDSPREVIGLVLKKLGDSYNNENL 256
Query: 60 DLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVA 119
+ A + L L Q + S YL+ I D W VGWS D+ + R +
Sbjct: 257 NAIAA-----LPTELEQLHQQVLFYSSDRYLQPLIIEDAWAVVGWSHDIEAQIDRQPKLR 311
Query: 120 VVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVI 179
VVVP+ G +LW+D+W +P T S ++WI + L A A
Sbjct: 312 VVVPEEGTALWSDIWVLPKQQPRPTN---------SQAAYKWINYTLSPAIANQI----- 357
Query: 180 PGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
+AL + +P + P++ + P E++A+ E L+PLS+ LS+Y L
Sbjct: 358 -----TALTDAVSTMP--VNADLPAKIRANQLKFPSPEVIAKSELLQPLSDDALSEYLAL 410
Query: 240 VADLQKP 246
+L+ P
Sbjct: 411 WQELRSP 417
>gi|308813680|ref|XP_003084146.1| putrescine-binding periplasmic protein-related (ISS) [Ostreococcus
tauri]
gi|116056029|emb|CAL58562.1| putrescine-binding periplasmic protein-related (ISS) [Ostreococcus
tauri]
Length = 429
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 117/242 (48%), Gaps = 18/242 (7%)
Query: 1 MVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID 60
+ IAY+K K K + P DW DL+ P L G I M N+PR V+ + LK G S N +
Sbjct: 194 VTIAYRKDKLPK-GVKPPTDWSDLFDPRLQGMIGMPNAPRLVLSAALKAEGMSVNVGD-- 250
Query: 61 LQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAV 120
V G V + L ++FD YL+A GD V VG S DV +R + +
Sbjct: 251 --VGGVDGRVSARVRQLRESVKVFDDLQYLQALACGDCAVVVGPSEDVFSVARRSTLIVP 308
Query: 121 VVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIP 180
VVP+SG +LW+D W +P S +GG GPSP + QWI + L AR + + +
Sbjct: 309 VVPRSGTTLWSDCWVVPTTS---VTNVGG---GPSPALEQWINYTLSPAR-VNMRVGLKG 361
Query: 181 GASP-----SALETTLVKLPEELLKGKPSQDTNLIVG-VPPAEILARCEFLEPLSEATLS 234
G SP +E+ + P + D +++ G +P + A EF PL++ +
Sbjct: 362 GISPLMFDGRGIESGYARYPNVARPVLGTSDEDMLKGWIPDDSVWAASEFQLPLTDRVRA 421
Query: 235 DY 236
Y
Sbjct: 422 QY 423
>gi|255073983|ref|XP_002500666.1| ATP-binding cassette superfamily [Micromonas sp. RCC299]
gi|226515929|gb|ACO61924.1| ATP-binding cassette superfamily [Micromonas sp. RCC299]
Length = 580
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 127/273 (46%), Gaps = 47/273 (17%)
Query: 2 VIAYKKSKFRKH-NLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID 60
+IAY+K K P DW DLWRPE R+ M + PR+++ + L+ G S N++
Sbjct: 300 LIAYRKDKLPASLRERPPRDWDDLWRPEFKRRVGMGSGPRQMLTAALRAEGMSANADGW- 358
Query: 61 LQVAGGKISVQQNLALLANQARLF-DSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVA 119
GG +V+ L L + L D YL+A G GD W+AVG S DVL ++ S +
Sbjct: 359 ----GGGGNVRARLESLRREQLLIQDDVQYLQALGNGDAWIAVGNSDDVLSMARKSSLIG 414
Query: 120 VVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVI 179
VVVP SG +L+AD+W +PA++ ++ GG SPL +QW ++ Q AR + + +
Sbjct: 415 VVVPMSGTTLFADVWCVPASA---ARKPGGV----SPLTNQWFDYTTQPAR-VNLRVGLR 466
Query: 180 PGASPSALETTLVKLPEELLKG--------KPSQDTN----------------------- 208
G SP + + + G + D N
Sbjct: 467 GGVSPIVFDGGGIDYASIGMNGPTGGFVDYDAAGDKNGTRGMGAKIKDFLSRDEKNRGGE 526
Query: 209 -LIVGVPPAEILARCEFLEPLSEATLSDYEWLV 240
+ G+PP E+ AR EFL PLS Y L+
Sbjct: 527 IMQGGMPPDEVWARSEFLYPLSPRIKDQYNELM 559
>gi|307111783|gb|EFN60017.1| hypothetical protein CHLNCDRAFT_9420, partial [Chlorella
variabilis]
Length = 204
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 88/140 (62%), Gaps = 5/140 (3%)
Query: 2 VIAYKKSKFRKHNL---APIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN 58
++AY++ K + + API DW DL +P+L GR++ ++SPR+V+G+ LK +G YNS+
Sbjct: 67 LVAYRRDKLGRADGGGGAPIRDWSDLLQPQLKGRVAFMDSPRDVVGAALKTLGLGYNSSA 126
Query: 59 IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNV 118
D++ G +S Q + R+F S+ +L+A G GDV VGWS D+LP V R +N+
Sbjct: 127 ADIRRCG--LSEQDVRTRVQRLVRVFSSSDHLRALGAGDVDAVVGWSDDLLPLVLRTNNL 184
Query: 119 AVVVPKSGASLWADLWAIPA 138
P SG SL+AD W IPA
Sbjct: 185 EAAAPLSGTSLFADCWCIPA 204
>gi|428297544|ref|YP_007135850.1| extracellular solute-binding protein [Calothrix sp. PCC 6303]
gi|428234088|gb|AFY99877.1| extracellular solute-binding protein family 1 [Calothrix sp. PCC
6303]
Length = 387
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 91/166 (54%), Gaps = 16/166 (9%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
++ Y++ KF L +DW DLWR +L R+S+++ PRE+IG LK +G SYN+ ++
Sbjct: 170 MMIYRRDKFADLGLKAPQDWSDLWRDDLRNRVSLLDHPREIIGLTLKKLGKSYNTQDL-- 227
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
++ L L + +DS+ YL+ +GD ++ GWS D+LP + R ++ +
Sbjct: 228 ---STVPQLEAELQSLNKNVKFYDSSKYLEPLLLGDTLISTGWSHDILPVMTRYPQLSAI 284
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQ 167
VP+SG ++WAD+W P S+ + L+ QWI F Q
Sbjct: 285 VPESGTAIWADMWVNPINSQNQVD-----------LLSQWINFYWQ 319
>gi|302829761|ref|XP_002946447.1| hypothetical protein VOLCADRAFT_103032 [Volvox carteri f.
nagariensis]
gi|300268193|gb|EFJ52374.1| hypothetical protein VOLCADRAFT_103032 [Volvox carteri f.
nagariensis]
Length = 561
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 111/211 (52%), Gaps = 32/211 (15%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGA--------- 52
V AY++ + + PI DW DL +P LAGR++M++SPRE++ + ++ + A
Sbjct: 203 VYAYRRDRLLRRGGRPILDWCDLLQPALAGRVAMLDSPRELLAAAVRSLAAENAGLGDGG 262
Query: 53 --------------SYNSNNIDLQVAGGKISV-QQNLALLANQARLFDSTHYLKAFGIGD 97
S N++ +L AG V Q +A Q RLF S +++A GD
Sbjct: 263 GRGVDGGKSGRAWVSVNASARELAAAGISEEVLQGRVAAFRRQVRLFSSQDHVRALQAGD 322
Query: 98 VWVAVGWSSDVLPAVKRM-SNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSP 156
VW VG+S +++ +R S++ ++ P SG LWAD+WA+PA +R G R GPSP
Sbjct: 323 VWAVVGYSQELVQLAERSGSSIELLAPLSGTQLWADVWAVPAGAR-----GGHRHSGPSP 377
Query: 157 LIHQWIEFCLQTARALPFKQEVIPGASPSAL 187
L+ WIEF L R Q + G +P+AL
Sbjct: 378 LLPVWIEFTLSPGRIT--GQPSLKGGAPAAL 406
>gi|443476073|ref|ZP_21065996.1| extracellular solute-binding protein family 1 [Pseudanabaena biceps
PCC 7429]
gi|443018979|gb|ELS33141.1| extracellular solute-binding protein family 1 [Pseudanabaena biceps
PCC 7429]
Length = 361
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 118/235 (50%), Gaps = 30/235 (12%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY+ K + I W DLWRPEL ++S+ + REVIG VLK MG SY +N+ +
Sbjct: 146 IAYRSDKLKFD----ITQWSDLWRPELKQKLSLPDDAREVIGLVLKKMGQSYQVDNL-AE 200
Query: 63 VAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVV 122
++ Q+L L++Q + S +YL++ D AVGW+SD+ K+ N+ VV+
Sbjct: 201 RKDIFTALIQDLKSLSSQVLTYSSDNYLQSLLNTDTLAAVGWTSDMYKTAKQNPNLKVVI 260
Query: 123 PKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGA 182
P+ G +LW+D+W IP G V + W+ FCL A+ +
Sbjct: 261 PQDGTALWSDIWVIPK----------GEVAIAA---TAWMNFCLTPEIAIQLT-SLTDAV 306
Query: 183 SPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
SPS + L K+P +K P + +ILA+ E + PLS TL+ Y+
Sbjct: 307 SPS---SALDKVPNS-VKADP-------IKFFSQDILAKSELILPLSPTTLTQYK 350
>gi|86609220|ref|YP_477982.1| polyamine ABC transporter periplasmic polyamine-binding protein
[Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557762|gb|ABD02719.1| polyamine ABC transporter, periplasmic polyamine-binding protein
[Synechococcus sp. JA-2-3B'a(2-13)]
Length = 383
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 108/237 (45%), Gaps = 25/237 (10%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY++ + R+ PI DW DLWRPELAG++++ + PREVIG LK MG SYN
Sbjct: 157 IAYRRDRVRE----PIRDWADLWRPELAGKLTLPDHPREVIGLTLKKMGRSYND-----P 207
Query: 63 VAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVV 122
+ + ++Q L L Q + S+ YL + D WVAVGWS D+ +AVV+
Sbjct: 208 LNPEDVELRQELGSLHRQVLTYTSSDYLPILRLADSWVAVGWSQDLYATQANYPELAVVI 267
Query: 123 PKSGASLWADLWAIPAA---SRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVI 179
P SG+++W D+W P + + L+ W++F L A + V
Sbjct: 268 PASGSAIWWDVWVRPHVEDHAHEDNAHTESTQTDSGSLLADWLDFVLNPEFA---PRLVN 324
Query: 180 PGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDY 236
PS L L +L L + Q + R E PLS A Y
Sbjct: 325 LSGIPSVLPLDLAQLAPRLQRRADLQIST----------WQRSEIWRPLSSAEAESY 371
>gi|86605920|ref|YP_474683.1| polyamine ABC transporter polyamine-binding protein [Synechococcus
sp. JA-3-3Ab]
gi|86554462|gb|ABC99420.1| polyamine ABC transporter, polyamine-binding protein [Synechococcus
sp. JA-3-3Ab]
Length = 374
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 90/164 (54%), Gaps = 15/164 (9%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY++ + PI DW DLWRPELAG++++ + PREVIG VLK +G SYN + +D +
Sbjct: 157 IAYRRDRVSD----PIRDWADLWRPELAGKLTLPDHPREVIGLVLKKLGRSYN-DPLDPE 211
Query: 63 VAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVV 122
A +++ L L Q + S YL + D WVAVGWS D+ + V +
Sbjct: 212 EA----ELRRELGSLHRQVLAYTSADYLPMLRLADSWVAVGWSQDLYATQANYPELEVAI 267
Query: 123 PKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCL 166
P SG+++W D+W P + + ++ G L+ WI+F L
Sbjct: 268 PASGSAIWWDVWVRPHRAHNASPELEGS------LLADWIDFVL 305
>gi|443316967|ref|ZP_21046392.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 6406]
gi|442783430|gb|ELR93345.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 6406]
Length = 393
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 118/245 (48%), Gaps = 29/245 (11%)
Query: 1 MVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID 60
+V+ Y ++ F P + W DLWR ELAGR+ + PR ++G +LK + S N +
Sbjct: 160 LVMLYNRAPFEALGWQP-QSWTDLWRSELAGRVILPRHPRLLLGIILKSLEESANHPD-P 217
Query: 61 LQVAGGKISVQQNLALLANQARL-----FDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM 115
QVA + N A F THY++ G+ WVAVGWS+++ P ++
Sbjct: 218 TQVAELGARMAAMAGAKPNPAGTSPALTFADTHYIEPLIRGEAWVAVGWSTEIRPVLEGY 277
Query: 116 SNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALP-- 173
+A VVP+ G L ADLW PA Q G R+ +P WI++ Q ALP
Sbjct: 278 RQLAAVVPEPGTLLSADLWVHPA------PQQGARMPLSAP-EQAWIDYWWQENTALPLT 330
Query: 174 -FKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEAT 232
F Q G +P L+ T+ L + + + +P EI+A EFL PL+ +
Sbjct: 331 LFSQ----GLAPQLLDGTIGDLTPDFSAAQ--------LLLPEGEIMANSEFLLPLAADS 378
Query: 233 LSDYE 237
L+ YE
Sbjct: 379 LAQYE 383
>gi|224139138|ref|XP_002326777.1| predicted protein [Populus trichocarpa]
gi|222834099|gb|EEE72576.1| predicted protein [Populus trichocarpa]
Length = 108
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 71/112 (63%), Gaps = 8/112 (7%)
Query: 109 LPAVKRMSNVAVVVPKSGASLWADLWA-IPAASRLETKQIGGRVRGPSPLIHQWIEFCLQ 167
P KRMSNVAVV P +G SLWADL + +P L+ + G ++ LIH+WIE LQ
Sbjct: 3 FPLPKRMSNVAVVSPNTGTSLWADLQSQLP--RDLKLIRSGAKLEDHPSLIHEWIEIRLQ 60
Query: 168 TARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEIL 219
ARALPFKQEVIPGA+PS + +P+EL K KP TNLI V P +I
Sbjct: 61 AARALPFKQEVIPGATPSD-----IGVPKELAKCKPKLGTNLIAEVHPPDIF 107
>gi|303290100|ref|XP_003064337.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545]
gi|226453935|gb|EEH51242.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545]
Length = 647
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 87/169 (51%), Gaps = 14/169 (8%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
+IAY+K K L P DW DL+RP+ ++ + + R ++ L+ G S N+ ++D
Sbjct: 353 LIAYRKDKI-PRGLRPPTDWPDLFRPQYKKKVGIASGSRFMLTVALRAGGRSANATDVDD 411
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
++ LA Q L L+ GDVW+ G S DVL + SN+ VV
Sbjct: 412 ATRNRLYDLRT--TQLATQVDL----DALQGLSNGDVWIIAGNSDDVLKTAAKSSNIGVV 465
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTAR 170
VP SG +L+AD W +PAA+ L+ + G SPL+ QW +F Q AR
Sbjct: 466 VPSSGTTLYADAWCVPAAA-LD------KPGGVSPLVDQWFDFTTQPAR 507
>gi|354566674|ref|ZP_08985845.1| extracellular solute-binding protein family 1 [Fischerella sp.
JSC-11]
gi|353544333|gb|EHC13787.1| extracellular solute-binding protein family 1 [Fischerella sp.
JSC-11]
Length = 361
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 17 PIEDWKDLWR--PELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNL 74
P EDW+ LW+ +L +I+++N REV+G+VLK +G SYNS N + +V + L
Sbjct: 159 PPEDWEYLWQNQQQLNNKITLLNDVREVMGAVLKMLGYSYNSKN-ETEVK----QAYEKL 213
Query: 75 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 134
L FD+ + GD+ +++ +SSD + + VVPKSG+SLW D
Sbjct: 214 QALKGAIAAFDTDAWRNQIVAGDLLLSMCYSSDAVKITQENPKFKYVVPKSGSSLWTDTV 273
Query: 135 AIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKL 194
IP +R I G + WI F F+ EV S TT +
Sbjct: 274 VIPTTAR----NIDG--------AYAWINFI--------FQPEVAAQISQRLWVTTSSRA 313
Query: 195 PEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSE 230
ELL K D N+ PP IL +CE + PL E
Sbjct: 314 AFELLPNKIKNDPNVF---PPDSILEKCERITPLGE 346
>gi|22298258|ref|NP_681505.1| hypothetical protein tll0716 [Thermosynechococcus elongatus BP-1]
gi|22294437|dbj|BAC08267.1| tll0716 [Thermosynechococcus elongatus BP-1]
Length = 352
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 94/208 (45%), Gaps = 31/208 (14%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
+ Y++ F P DW LW P + G S++N+PREVIG LK +G SYNS
Sbjct: 141 ALIYRRDFFADLGWEPT-DWDVLWHPAVQGHYSLLNTPREVIGLTLKSLGLSYNS----- 194
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR-MSNVAV 120
+++ L L R S YL+ +G +AVGWS+D+LP +++
Sbjct: 195 --PAPHPELRERLQHLRQGCRFLSSDAYLQPLMLGSTQLAVGWSTDLLPLLQQDPQTYGA 252
Query: 121 VVPKSGASLWADLWAIPAASRLET---------KQIGGRVR----GPSPLIHQWIEFCLQ 167
V P SG +LW DLW P Q+ R+ PSPL+ E L
Sbjct: 253 VFPASGTALWVDLWVCPREPNAAALAWLNYWWQPQVAERLSQFSPAPSPLVRNLRETLL- 311
Query: 168 TARALPFKQEVIPGASPSALETTLVKLP 195
+R +PF A+P+A + V LP
Sbjct: 312 -SRYIPF-------ATPTAFAKSEVLLP 331
>gi|254412638|ref|ZP_05026411.1| Bacterial extracellular solute-binding protein, putative
[Coleofasciculus chthonoplastes PCC 7420]
gi|196180373|gb|EDX75364.1| Bacterial extracellular solute-binding protein, putative
[Coleofasciculus chthonoplastes PCC 7420]
Length = 371
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 108/220 (49%), Gaps = 38/220 (17%)
Query: 17 PIEDWKDLW--RPELAGRISMVNSPREVIGSVLKYMGASYNSNNID-LQVAGGKISVQQN 73
P EDW LW + +LA R+++VN REV+G+ LK +G SYNS N++ +Q A Q
Sbjct: 169 PPEDWDYLWVYQQQLAKRMTLVNDVREVMGAALKKLGYSYNSTNVEHIQAA------YQA 222
Query: 74 LALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADL 133
L L F S + GD+ +A+ +SSD + ++ V+P+SG+SLW D
Sbjct: 223 LMDLKPAIASFTSDAWRPQILSGDLKIAMCYSSDATEIMPENEDLRYVLPESGSSLWIDT 282
Query: 134 WAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQ---TARALPFKQEVIPGASPSALETT 190
AIP + V G + WI F LQ AR + E + A+P+
Sbjct: 283 LAIP--------KTAPNVEG----AYAWINFMLQPDVAARIV----ERLSFATPNKAAYN 326
Query: 191 LVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSE 230
L LP +L DT+L PP E L RCE LEPL E
Sbjct: 327 L--LPPDL-----KNDTSLF---PPEEALERCENLEPLGE 356
>gi|300869344|ref|ZP_07113934.1| extracellular solute-binding protein [Oscillatoria sp. PCC 6506]
gi|300332643|emb|CBN59132.1| extracellular solute-binding protein [Oscillatoria sp. PCC 6506]
Length = 376
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 113/221 (51%), Gaps = 36/221 (16%)
Query: 17 PIEDWKDLWRPE--LAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKIS-VQQ 72
PIEDW DLW+ + L+ R++++N REV+G+ L+ +G S N+ N +++ A ++S ++
Sbjct: 174 PIEDWDDLWKNQKALSKRMTLLNDLREVMGAALRMLGYSLNTTNPNEIREAYERLSELKP 233
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWAD 132
+LA F + + +GD+ VA+ +SSD + +N+ +VP+SG+SLW D
Sbjct: 234 DLAS-------FTTDAWRPQMLVGDLMVAMCYSSDANEVIPENTNLQYIVPRSGSSLWTD 286
Query: 133 LWAIPAASRLETKQIGGRVRGPSP-LIHQWIEFCLQTARALPFKQEVIPGASPSALETTL 191
IP + P+P ++WI F LQ A + ++PS L
Sbjct: 287 TLVIPKFA-------------PNPEAAYKWINFMLQGDVAASLVDR-LSFSTPSEEAFNL 332
Query: 192 VKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEAT 232
+ +P N I+ PP EILA+C+ + P+ E T
Sbjct: 333 L---------EPEVRENKIL-FPPEEILAKCQGIAPVGEVT 363
>gi|254421830|ref|ZP_05035548.1| hypothetical protein S7335_1980 [Synechococcus sp. PCC 7335]
gi|196189319|gb|EDX84283.1| hypothetical protein S7335_1980 [Synechococcus sp. PCC 7335]
Length = 393
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 105/240 (43%), Gaps = 34/240 (14%)
Query: 1 MVIAYKKSKF---RKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSN 57
+V+ Y+ S+F + P W+DL P+L+ I++ + PR +I + K S+N
Sbjct: 155 LVVVYRHSQFLAKSRTGKQPFSSWQDLLAPDLSRSIALPSHPRILISLLQKLQTGSFNPV 214
Query: 58 NIDLQVAGGKISVQQN------LALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPA 111
+ D V+ ++ Q N A L Q + +DS LKA DV V VGWSSDV A
Sbjct: 215 STDNPVSSEQLLSQLNDQLAAPFAKLTAQVKTYDSNTALKALINEDVKVVVGWSSDVAVA 274
Query: 112 VKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA 171
+KR ++ VVP G+ L AD+W P + L + WI FC Q A
Sbjct: 275 LKRYRDLRAVVPDEGSLLSADMWVQPKGATLTSA------------AKTWISFCWQQGPA 322
Query: 172 LPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEA 231
G SP L T +LP L + + S L E L PLS++
Sbjct: 323 TELS-TTPKGISPIFLATD-KQLPSSLERTQLS-----------LRALQNSELLSPLSQS 369
>gi|427736973|ref|YP_007056517.1| spermidine/putrescine-binding periplasmic protein [Rivularia sp.
PCC 7116]
gi|427372014|gb|AFY55970.1| spermidine/putrescine-binding periplasmic protein [Rivularia sp.
PCC 7116]
Length = 361
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 104/218 (47%), Gaps = 32/218 (14%)
Query: 16 APIEDWKDLWRPE--LAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKI-SVQQ 72
P +DW LW+ + L+ RI+++N REVIG VLK +G SYNS +G +I +
Sbjct: 158 TPPQDWDYLWQNQKKLSKRITLLNDAREVIGGVLKMLGYSYNSQ------SGKQIQQAYE 211
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWAD 132
L +L F + + GD+ +A+ +SSD + + + PKSG+SLW D
Sbjct: 212 KLQVLKPDIAAFSTDAWRNQILSGDLVLAMCYSSDAFLITRDNPKLKYITPKSGSSLWTD 271
Query: 133 LWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLV 192
AIP + T I G ++WI F L+ A Q + A+P+ L
Sbjct: 272 TIAIP----ITTSNIDG--------AYEWINFMLKPEVAARMSQR-LGVATPNQAGFEL- 317
Query: 193 KLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSE 230
LPE+ ++ P+ PP IL +CE L P+ E
Sbjct: 318 -LPEK-IQNNPTL-------FPPENILEKCERLSPVGE 346
>gi|17232535|ref|NP_489083.1| polyamine-binding protein of polyamine ABC transporter [Nostoc sp.
PCC 7120]
gi|17134181|dbj|BAB76742.1| polyamine-binding protein of polyamine ABC transporter [Nostoc sp.
PCC 7120]
Length = 360
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 107/213 (50%), Gaps = 32/213 (15%)
Query: 19 EDWKDLWRPE--LAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLAL 76
EDW+ LWR + L+ R++++N REVIG+VL+ +G SYNS N + Q+ + L+
Sbjct: 160 EDWEYLWRNQKLLSKRMTLLNDVREVIGAVLRMLGYSYNSQN-EAQIK----QAYEKLST 214
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
L FD+ + GD+ +A+ +S+D +K + V+P+SG+SLW D I
Sbjct: 215 LKPAIAAFDTDAWRNQILAGDLALAMCYSADATKVIKENPKLKYVIPRSGSSLWTDTIVI 274
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEV-IPGASPSALETTLVKLP 195
P ++ + G + WI F LQ A + + I + +A E +LP
Sbjct: 275 PKSA----PNLDG--------AYAWINFILQPEVAATTSERLKISTPNNAAFE----QLP 318
Query: 196 EELLKGKPSQDTNLIVGVPPAEILARCEFLEPL 228
+++ + NL PP+ IL +CE + P+
Sbjct: 319 KQI-----KTNENL---YPPSSILDKCERISPV 343
>gi|75908519|ref|YP_322815.1| extracellular solute-binding protein [Anabaena variabilis ATCC
29413]
gi|75702244|gb|ABA21920.1| extracellular solute-binding protein, family 1 [Anabaena variabilis
ATCC 29413]
Length = 360
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 107/213 (50%), Gaps = 32/213 (15%)
Query: 19 EDWKDLWRPE--LAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLAL 76
EDW+ LW+ + L+ RI+++N REVIG+VL+ +G SYNS N + Q+ + L+
Sbjct: 160 EDWEYLWKNQKLLSKRITLLNDVREVIGAVLRMLGYSYNSQN-EAQIK----QAYEKLST 214
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
L FD+ + GD+ +A+ +S+D +K + V+P+SG+SLW D I
Sbjct: 215 LKPAIAAFDTDAWRNQILAGDLALAMCYSADATKVIKENPKLKYVIPRSGSSLWTDTIVI 274
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEV-IPGASPSALETTLVKLP 195
P ++ + G + WI F LQ A + + I + +A E +LP
Sbjct: 275 PKSA----PNLDG--------AYAWINFILQPEVAATTSERLKISTPNNAAFE----QLP 318
Query: 196 EELLKGKPSQDTNLIVGVPPAEILARCEFLEPL 228
+++ + NL PP+ IL +CE + P+
Sbjct: 319 KQI-----KTNENL---YPPSSILDKCERISPV 343
>gi|428206397|ref|YP_007090750.1| extracellular solute-binding protein [Chroococcidiopsis thermalis
PCC 7203]
gi|428008318|gb|AFY86881.1| extracellular solute-binding protein family 1 [Chroococcidiopsis
thermalis PCC 7203]
Length = 373
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 108/218 (49%), Gaps = 34/218 (15%)
Query: 17 PIEDWKDLW--RPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNL 74
P DW+ LW R +L+GR+++++ REV+G+ L+ +G SYNS + + Q+ + L
Sbjct: 171 PPTDWEYLWKNRQQLSGRMTLIDDVREVMGATLRMLGYSYNSKD-ESQIK----QAYEKL 225
Query: 75 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 134
L FD+ + GD+ +A+ +S+D + + N+ ++P SG SLW D
Sbjct: 226 RELKPSIAAFDTDAWRSQILAGDLVLAMAYSTDGIKISQENPNLRYIIPASGTSLWTDTI 285
Query: 135 AIP-AASRLETKQIGGRVRGPSPLIHQWIEFCLQ-TARALPFKQEVIPGASPSALETTLV 192
AIP A L+ + W+ + L+ T A +++ + + ALE
Sbjct: 286 AIPKTAPNLDAA-------------YTWLNYNLEPTVAAEICQRQTVAIPNQVALE---- 328
Query: 193 KLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSE 230
+LP +L QDTNL PP +L +CE + PL +
Sbjct: 329 QLPTQL-----RQDTNLF---PPESVLNKCERISPLGD 358
>gi|113476392|ref|YP_722453.1| extracellular solute-binding protein [Trichodesmium erythraeum
IMS101]
gi|110167440|gb|ABG51980.1| extracellular solute-binding protein, family 1 [Trichodesmium
erythraeum IMS101]
Length = 353
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 101/219 (46%), Gaps = 34/219 (15%)
Query: 16 APIEDWKDLWRPE--LAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQN 73
P DWK LW + + R+++VN REVIG L+ +G SYNS N+D K + Q+
Sbjct: 150 TPPNDWKYLWENQDLVLKRMTLVNDVREVIGCALRKLGYSYNSTNVD----NIKEAYQEL 205
Query: 74 LALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADL 133
L L A F + + + D+ +A+ +SSD ++ + P+SG+SLW D
Sbjct: 206 LTLKPAIAS-FTTDGWRSQILVEDLLIAMCYSSDAAEIKPENEDLEYITPRSGSSLWTDT 264
Query: 134 WAIPAASRLETKQIGGRVRGPSPL-IHQWIEFCLQTARALPFKQEV-IPGASPSALETTL 191
IP P+P +QWI F LQ A + + AS A +
Sbjct: 265 LVIPK-------------NAPNPEGAYQWINFMLQPDVAAQIVERLSFTTASRKAYQI-- 309
Query: 192 VKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSE 230
LPEEL +D+ L PP +L +CE L PL +
Sbjct: 310 --LPEEL-----KEDSTLF---PPESVLEKCESLAPLGK 338
>gi|428217887|ref|YP_007102352.1| extracellular solute-binding protein [Pseudanabaena sp. PCC 7367]
gi|427989669|gb|AFY69924.1| extracellular solute-binding protein family 1 [Pseudanabaena sp.
PCC 7367]
Length = 392
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 114/237 (48%), Gaps = 32/237 (13%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID-L 61
+AY + + + EDW+ +W R++++N PREV+G L + SYNS+N D L
Sbjct: 175 LAYNSAAIIEEIGSEPEDWQFMWEHIDRLRLTLLNDPREVMGMALHTLNYSYNSDNGDEL 234
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
Q A ++ Q+L ++ FD+ + + GD +++ +S D L AV++ ++ +
Sbjct: 235 QAAFERL---QDLKPAVSK---FDTYAWAEPLMAGDYLISMAYSGDGLNAVRQNPDIKYI 288
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSP-LIHQWIEFCLQTARALPFKQEVIP 180
+P SG S+W D IP + P P + WI+F +Q A +E
Sbjct: 289 LPASGTSIWTDAVVIPKTA-------------PDPEAAYAWIDFIMQPEIAARMSEESSY 335
Query: 181 GASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
G +A + L K+ EEL ++ +P AEILA+ + L L + L YE
Sbjct: 336 G---TANKAALPKIKEEL--------KDIPAWLPSAEILAKSDRLVKLPDEVLQVYE 381
>gi|414075947|ref|YP_006995265.1| ABC-type spermidine/putrescine transport system periplasmic binding
component [Anabaena sp. 90]
gi|413969363|gb|AFW93452.1| ABC-type spermidine/putrescine transport system periplasmic binding
component [Anabaena sp. 90]
Length = 360
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 104/215 (48%), Gaps = 32/215 (14%)
Query: 19 EDWKDLWR--PELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLAL 76
EDW+ LW+ +L R +++N REV+G+ L+ +G SYNS N + +V Q L +
Sbjct: 161 EDWEYLWQNQDQLNKRFTLLNDVREVMGATLRMLGYSYNSQNEN-EVK----QAYQKLQI 215
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
L FD+ + GD+ VA+ +S+D + + + V+P+SG+SLW D I
Sbjct: 216 LKPAIAAFDTDAWQNKILAGDLAVAMCYSADAVKICQENPKLKFVIPRSGSSLWTDTIVI 275
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEV-IPGASPSALETTLVKLP 195
P ++ I G + WI LQ A + + I S + E +LP
Sbjct: 276 PKSN----PNIAG--------AYAWINLILQPEVAAKISERLYISTPSRAGFE----QLP 319
Query: 196 EELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSE 230
+ + ++TNL PP +LA+CE L PL +
Sbjct: 320 KAI-----QENTNLF---PPQSLLAKCERLTPLGK 346
>gi|424513096|emb|CCO66680.1| periplasmic polyamine-binding protein of ABC transporter
[Bathycoccus prasinos]
Length = 572
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 116/244 (47%), Gaps = 18/244 (7%)
Query: 1 MVIAYKKSKFRKHNLAPIEDWKDLWRPELAGR--ISMVNSPREVIGSVLKYMGASYNSNN 58
++AY+ K + + I DW D++ P + + ++PREV+ + LK MG N+
Sbjct: 334 TLLAYRADKLPR-GVEAITDWTDVFDPRFGNKTFVGCADAPREVLSAALK-MGDPRNT-- 389
Query: 59 IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNV 118
I+ + + S + L L + ++ D YL+A GD+ VA G S DVL +R S V
Sbjct: 390 INPKTIDNERSQRDALRRLRAKIKVSDDETYLRALQNGDISVAFGGSDDVLALCRRSSLV 449
Query: 119 AVVVPKSGASLWADLWAIPAASRLE--TKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQ 176
V P SG +L D++ P + T + SP I W++F L + R + +
Sbjct: 450 KPVFPPSGTALHCDVFVRPVLNEGGGYTSSVPHSAPSSSPGIDAWLDFMLDSGR-INERG 508
Query: 177 EVIPGASPSALETTLVKLPEELLKGKPSQDT--NLIVGVPPAEIL-ARCEFLEPLSEATL 233
+ G +P + + + G+ SQD ++ G P ++ + EF+ PLS+A +
Sbjct: 509 GLRSGLNPIQFDG------DRIYGGRSSQDDVGDIFKGWLPDDMAWSNSEFVLPLSDAAI 562
Query: 234 SDYE 237
YE
Sbjct: 563 RAYE 566
>gi|440682704|ref|YP_007157499.1| extracellular solute-binding protein family 1 [Anabaena cylindrica
PCC 7122]
gi|428679823|gb|AFZ58589.1| extracellular solute-binding protein family 1 [Anabaena cylindrica
PCC 7122]
Length = 363
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 17 PIEDWKDLWRPE--LAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNL 74
P EDW+ LW+ + L R++++N REV+G+ LK +G SYNS N + +V + L
Sbjct: 162 PPEDWEYLWQNQDKLYKRMTLLNDVREVMGAALKMLGYSYNSQN-ETEVK----QAYEKL 216
Query: 75 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 134
+L FD+ + GD+ +A+ +S+D + K V+P+SG+SLW D
Sbjct: 217 KILKPAIAAFDTDAWQNQLLAGDLLLAMCYSTDAVNISKENPKFKYVIPRSGSSLWTDTI 276
Query: 135 AIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKL 194
IP +I + G + WI LQ +V S +T +
Sbjct: 277 VIP--------KIAANLAGA----YAWINLILQP--------DVTAKLSKRLNISTPNRA 316
Query: 195 PEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSE 230
E L + ++TNL PP +LA+CE P+ E
Sbjct: 317 GFEQLPKQSRENTNLF---PPESLLAKCERSTPIGE 349
>gi|332705363|ref|ZP_08425441.1| spermidine/putrescine-binding periplasmic protein [Moorea producens
3L]
gi|332355723|gb|EGJ35185.1| spermidine/putrescine-binding periplasmic protein [Moorea producens
3L]
Length = 374
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 107/225 (47%), Gaps = 35/225 (15%)
Query: 19 EDWKDLW--RPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLA 75
EDW LW + +L+ R++++N REV+G+ LK +G SYNS N +++ A + L
Sbjct: 174 EDWSYLWQDKDKLSRRMTLLNDVREVMGATLKMLGYSYNSTNPQEIKKA------YETLV 227
Query: 76 LLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWA 135
L F S + GD+W+A+ +SSD + ++ V+PKSG+SLW D A
Sbjct: 228 DLKPSIASFSSDAWRSQILSGDLWIAMCYSSDAAEIMAENPDLQYVLPKSGSSLWTDTLA 287
Query: 136 IP-AASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKL 194
IP A LE + WI F L+ A E + A+P+ +
Sbjct: 288 IPKTAPNLEGA-------------YAWINFMLEADVAAQI-CERLSFATPN-------QK 326
Query: 195 PEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEAT-LSDYEW 238
+LL + +D +L P + L RCE L P+ E + L D W
Sbjct: 327 AFKLLSREIQEDQSLF---PESSALERCEGLAPVDEVSELYDRYW 368
>gi|298492376|ref|YP_003722553.1| family 1 extracellular solute-binding protein ['Nostoc azollae'
0708]
gi|298234294|gb|ADI65430.1| extracellular solute-binding protein family 1 ['Nostoc azollae'
0708]
Length = 363
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 34/219 (15%)
Query: 16 APIEDWKDLWRPE--LAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKI-SVQ 71
P EDW+ LWR + L R++++N REV+G+ LK +G SYNS N ++++ A K+ S++
Sbjct: 161 TPPEDWEYLWRNQDKLYKRMTLLNDVREVMGATLKMLGYSYNSQNEMEIKQAYEKLLSLK 220
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWA 131
LA FD+ + GD+ +A+ +S+D + K + + V+P+SG+SLW
Sbjct: 221 PALAA-------FDTDAWQNQILAGDLLLAMCYSADGIKISKENAKLKYVIPRSGSSLWT 273
Query: 132 DLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTL 191
D IP + P + WI L+ A + + A+P+
Sbjct: 274 DTIVIP------------KTANNLPGAYSWINLLLKPDVAAAISKR-LNIATPN--RAGF 318
Query: 192 VKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSE 230
+LP ++ +TNL PP IL +CE + P+ +
Sbjct: 319 EQLPNQI-----QNNTNLF---PPQGILDKCERVTPIGK 349
>gi|152974814|ref|YP_001374331.1| extracellular solute-binding protein [Bacillus cytotoxicus NVH
391-98]
gi|152023566|gb|ABS21336.1| extracellular solute-binding protein family 1 [Bacillus cytotoxicus
NVH 391-98]
Length = 350
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 63/122 (51%), Gaps = 7/122 (5%)
Query: 21 WKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLAN 79
W DLW + GR++++N REV+G LK G S NS D Q+ +Q+ L LLA
Sbjct: 152 WNDLWNEKYKGRVTLLNDSREVLGMALKKNGFS-NSTKDDAQLKTAATDLQKLLPNLLA- 209
Query: 80 QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAA 139
FD+ + + F D W+ WS D K +V VVPK G ++WAD AIP
Sbjct: 210 ----FDTDNIKQKFITEDTWIGTVWSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKG 265
Query: 140 SR 141
++
Sbjct: 266 AK 267
>gi|374853292|dbj|BAL56204.1| extracellular solute-binding protein [uncultured candidate division
OP1 bacterium]
gi|374857069|dbj|BAL59922.1| extracellular solute-binding protein [uncultured candidate division
OP1 bacterium]
Length = 352
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 107/237 (45%), Gaps = 44/237 (18%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPE----LAGRISMVNSPREVIGSVLKYMGASYNSNN 58
I Y K P W DL+ P+ R+SM++ PRE IG+ LKY+G S NS +
Sbjct: 138 IGYNAQKLE----TPPTSWADLFEPDRLERYKNRVSMLDDPREAIGAALKYLGYSVNSTD 193
Query: 59 -IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN 117
L+ A + VQ+ LA +DS Y GD+ +A GWS + A SN
Sbjct: 194 PQQLEAAKNLLLVQK--PYLAR----YDSETYDDFLLTGDLVLAHGWSGEFAKAHVENSN 247
Query: 118 VAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQ---TARALPF 174
+ V+P+ G +WAD AIP +S+ R+ L H +I+F L+ A+ + F
Sbjct: 248 IRYVIPREGGVIWADNLAIPKSSQ--------RI----DLAHTFIDFLLRPTINAKIVNF 295
Query: 175 KQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEA 231
+ PS E + E++ N PP EIL + E++ + +A
Sbjct: 296 LR------YPSTNEAATAHILPEIV--------NDPAIYPPEEILEKLEWIRDVGDA 338
>gi|411118601|ref|ZP_11390982.1| spermidine/putrescine-binding periplasmic protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410712325|gb|EKQ69831.1| spermidine/putrescine-binding periplasmic protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 375
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 111/225 (49%), Gaps = 36/225 (16%)
Query: 19 EDWKDLWR--PELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLA 75
EDW+DLW+ P+L ++++++ REVIG+ LK +G SYNS N +++ A K+ VQ A
Sbjct: 172 EDWQDLWQMQPQLNRKMTLLSDVREVIGASLKSLGYSYNSTNPSEIKRAYEKL-VQLKPA 230
Query: 76 LLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAV--VVPKSGASLWADL 133
+ F + + +GD+ +++ +S+D + ++ + + V+PKSG SLW+D
Sbjct: 231 IAT-----FTTDAWRDRLLVGDLLLSMAYSADAVRLIQENPDTKLRYVIPKSGTSLWSDA 285
Query: 134 WAIPAASRLETKQIGGRVRGPSP-LIHQWIEFCLQTARALPFKQEVIPGASPSALETTLV 192
IP S P+P + WI F +Q + A+ Q + A+P+ +
Sbjct: 286 MVIPTTS-------------PNPDAAYAWINFMMQPSVAVDVTQRLF-FATPN--QAAYD 329
Query: 193 KLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
+LP L + PP EI+ CE + PL Y+
Sbjct: 330 QLPAPLRNNRSL--------FPPEEIIKACERIIPLEAKVTELYD 366
>gi|428226280|ref|YP_007110377.1| extracellular solute-binding protein [Geitlerinema sp. PCC 7407]
gi|427986181|gb|AFY67325.1| extracellular solute-binding protein family 1 [Geitlerinema sp. PCC
7407]
Length = 376
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 108/225 (48%), Gaps = 35/225 (15%)
Query: 11 RKHNLAPIEDWKDLW--RPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGK 67
RK P EDW+ LW +P L+ RI+++N REV+G+ L+ +G SYN+ + L+ A
Sbjct: 169 RKLQTVP-EDWRYLWDNQPMLSRRITLLNDMREVMGATLRMLGYSYNAEDPAQLEAA--- 224
Query: 68 ISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGA 127
+ L L F S + GD+ +A+ +SSD + ++ ++P+SG+
Sbjct: 225 ---YEELVKLKPAIASFTSDAWRSQIITGDLLIAMSYSSDAQLVTEENPDLEYLIPQSGS 281
Query: 128 SLWADLWAIP-AASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSA 186
SLW D IP +A +E + W+ F +Q + + Q + G +P +
Sbjct: 282 SLWVDTMVIPKSAPNVEAA-------------YAWLNFMMQPSVLVDLCQRL--GFTPPS 326
Query: 187 LETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEA 231
+ +LL + D L PP ++LARCE + P+S A
Sbjct: 327 ------RAAADLLPTELRNDPGLF---PPDQVLARCEGIAPVSGA 362
>gi|167630347|ref|YP_001680846.1| spermidine/putrescine abc transporter spermidine/putrescine-binding
protein [Heliobacterium modesticaldum Ice1]
gi|167593087|gb|ABZ84835.1| spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Heliobacterium
modesticaldum Ice1]
Length = 369
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 104/228 (45%), Gaps = 32/228 (14%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY +K+ K PI W+DLW P+ GR+ ++N REV+G LK G S NS +
Sbjct: 158 IAYN-TKYVKE---PISSWQDLWNPKYKGRLVLLNDSREVLGMALKKNGFS-NSTKDQKE 212
Query: 63 VAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVV 122
+ +L LA FD+ + F + W+ WS D K +VA V+
Sbjct: 213 LD----KAFNDLKTLAPNVLAFDTDDIKQKFITEEAWIGTMWSGDAAFVYKDNKDVAFVI 268
Query: 123 PKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGA 182
PK G ++WAD AIP ++ L Q+I + ++ ++ E I +
Sbjct: 269 PKEGTTIWADTLAIPKGAK------------HRELAEQFINYLMEPEVSVK-NYEFIGYS 315
Query: 183 SPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSE 230
+P+ E + EE K N ++ + +EI A+ E+L+ + +
Sbjct: 316 NPN--EKAFAQHSEEYRK-------NPMINLSKSEI-AKGEWLQDVGD 353
>gi|427716541|ref|YP_007064535.1| extracellular solute-binding protein [Calothrix sp. PCC 7507]
gi|427348977|gb|AFY31701.1| extracellular solute-binding protein family 1 [Calothrix sp. PCC
7507]
Length = 361
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 105/214 (49%), Gaps = 30/214 (14%)
Query: 19 EDWKDLWR--PELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLAL 76
EDW LW+ +L R++++N REV+G+ L+ +G SYNS + + Q+ + L +
Sbjct: 161 EDWDYLWQNQTQLHKRMTLLNDVREVMGATLRMLGYSYNSKDEN-QIK----QAYEKLKV 215
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
L FD+ + GD+ +A+ +S+D + K ++ V+P+SG+SLW D I
Sbjct: 216 LKPAIAAFDTDAWQNQILAGDLVLAMCYSADAIRVSKENPHLKYVIPRSGSSLWTDTIII 275
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPE 196
P + + G + WI F LQ A Q + A+P+ + +LP+
Sbjct: 276 PKTA----PNLDG--------AYAWINFILQPEVAAQVSQR-LSVATPN--RSGFEQLPK 320
Query: 197 ELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSE 230
++ +TNL PP I+ +CE + PL +
Sbjct: 321 QI-----QNNTNLF---PPESIVEKCERITPLGK 346
>gi|427730105|ref|YP_007076342.1| spermidine/putrescine-binding periplasmic protein [Nostoc sp. PCC
7524]
gi|427366024|gb|AFY48745.1| spermidine/putrescine-binding periplasmic protein [Nostoc sp. PCC
7524]
Length = 360
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 98/214 (45%), Gaps = 30/214 (14%)
Query: 19 EDWKDLWRPE--LAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLAL 76
EDW LW+ + L R++++N REV+G+VL+ +G SYNS N + L
Sbjct: 160 EDWNYLWQNQALLNKRMTLLNDVREVMGAVLRMLGYSYNSQN-----ENEIKQAYEKLTE 214
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
L FD+ + GD+ +A+ +S+D + K + V+P+SG+SLW D I
Sbjct: 215 LKPAIAAFDTDAWQNQMLAGDLVLAMCYSADAIRVSKENPKLKYVIPRSGSSLWTDTMVI 274
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPE 196
P ++ I G + WI F LQ A Q + A+P++ L+
Sbjct: 275 PKSA----PNIDG--------AYAWINFILQPEIAATTSQR-LKIATPNSAGFELL---- 317
Query: 197 ELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSE 230
P+Q N PP +L +CE + PL +
Sbjct: 318 ------PNQIKNNDDLFPPNALLEKCERISPLGQ 345
>gi|395236033|ref|ZP_10414233.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Enterobacter sp. Ag1]
gi|394729339|gb|EJF29335.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Enterobacter sp. Ag1]
Length = 370
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 88/190 (46%), Gaps = 24/190 (12%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKIS 69
AP++ W +++PE + +S +++P E+ +VL Y+G NS N D A +
Sbjct: 155 APVDSWDLIFKPENLEKLKSCGVSFLDAPSEIYATVLHYLGKDPNSTNAADYTGAANDL- 213
Query: 70 VQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVP 123
L L R F S+ Y+ GD+ VA+GWS D+L A R NVA +P
Sbjct: 214 ----LMKLRPNIRYFHSSQYINDLANGDICVAIGWSGDILQAANRAKEAKNGVNVAYSIP 269
Query: 124 KSGASLWADLWAIP--AASRLETKQIGGRVRGPSPL--IHQWIEFCLQTARALPFKQEVI 179
K GA ++ D++A+P A ++ E Q + P + I I + A P E +
Sbjct: 270 KEGAMVYFDMFALPVDAKNKDEAYQFLNYLMKPDVIANISNHIYYANANKEATPLLSEEV 329
Query: 180 ---PGASPSA 186
PG P A
Sbjct: 330 RSNPGIYPPA 339
>gi|453062799|gb|EMF03787.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily, partial [Serratia marcescens VGH107]
Length = 368
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 40/218 (18%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS N A
Sbjct: 154 APVDSWDLILKPENLEKLKSCGVSFLDAPSEVYATVLHYLGKDPNSTN-----AADYTGA 208
Query: 71 QQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVP 123
+L L L R F S+ Y+ GD+ VA+GWS DV+ A R NVA +P
Sbjct: 209 ANDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWSGDVMQAANRAKEAKNGVNVAYAIP 268
Query: 124 KSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGAS 183
K GA + D++A+PA ++ + +Q++ F + K +V+ G S
Sbjct: 269 KEGALTYFDMFAMPADAKNKDAA------------YQFLNFLM--------KPDVMAGIS 308
Query: 184 PSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILAR 221
VK L+ + ++ N+ PPA++ A+
Sbjct: 309 NYVYYANAVKDSTPLVNAEVRENPNVY---PPADLRAK 343
>gi|448241410|ref|YP_007405463.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Serratia marcescens WW4]
gi|445211774|gb|AGE17444.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Serratia marcescens WW4]
Length = 369
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 40/218 (18%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS N A
Sbjct: 154 APVDSWDLILKPENLEKLKSCGVSFLDAPSEVYATVLHYLGKDPNSTN-----AADYTGA 208
Query: 71 QQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVP 123
+L L L R F S+ Y+ GD+ VA+GWS DV+ A R NVA +P
Sbjct: 209 ANDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWSGDVMQAANRAKEAKNGVNVAYAIP 268
Query: 124 KSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGAS 183
K GA + D++A+PA ++ + +Q++ F + K +V+ G S
Sbjct: 269 KEGALTYFDMFAMPADAKNKDAA------------YQFLNFLM--------KPDVMAGIS 308
Query: 184 PSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILAR 221
VK L+ + ++ N+ PPA++ A+
Sbjct: 309 NYVYYANAVKDSTPLVNAEVRENPNVY---PPADLRAK 343
>gi|270261134|ref|ZP_06189407.1| hypothetical protein SOD_a03590 [Serratia odorifera 4Rx13]
gi|421782671|ref|ZP_16219125.1| putrescine-binding periplasmic protein [Serratia plymuthica A30]
gi|270044618|gb|EFA17709.1| hypothetical protein SOD_a03590 [Serratia odorifera 4Rx13]
gi|407755080|gb|EKF65209.1| putrescine-binding periplasmic protein [Serratia plymuthica A30]
Length = 369
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 97/218 (44%), Gaps = 40/218 (18%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS N A
Sbjct: 154 APVDSWDLILKPENLEKLKSCGVSFLDAPSEVYATVLHYLGKDPNSTN-----AADYTGA 208
Query: 71 QQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVP 123
+L L L R F S+ Y+ GD+ VA+GWS DV+ A R NVA +P
Sbjct: 209 ANDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWSGDVMQAANRAKEAKNGVNVAYTIP 268
Query: 124 KSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGAS 183
K GA + D++A+PA ++ + +Q++ F L K +V+ G S
Sbjct: 269 KEGALTYFDMFAMPADAKNKDAA------------YQFLNFLL--------KPDVMAGIS 308
Query: 184 PSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILAR 221
VK L+ + N+ PPA++ A+
Sbjct: 309 NFVYYANAVKDSTPLVNADIRNNPNVY---PPADLSAK 343
>gi|443316510|ref|ZP_21045951.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 6406]
gi|442783874|gb|ELR93773.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 6406]
Length = 382
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 109/229 (47%), Gaps = 43/229 (18%)
Query: 19 EDWKDLWRPE--LAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLA 75
EDW LW + LA +I++++ RE +G+ LK +G SYNS + +++ A ++ V+ A
Sbjct: 182 EDWDYLWENQSSLARQITLLDDVRETMGATLKSLGYSYNSTDPAEIEEAYERL-VEIKPA 240
Query: 76 LLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWA 135
L + F S Y A GD+ V + +S D + A + +VP SG+S+W D
Sbjct: 241 LAS-----FMSFGYEDALFGGDLTVVMAYSVDAISATIEDDRMEYIVPASGSSVWTDTMV 295
Query: 136 IPAASRLETKQIGGRVRGPS-PLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKL 194
IP ++ P+ ++W+ F L+ P S SA+E+
Sbjct: 296 IPTSA-------------PNVDAAYEWMNFMLE------------PEVSTSAVESLFFAT 330
Query: 195 PE----ELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEAT-LSDYEW 238
P +LL + + +L P E+LARCE + P+ +AT L D W
Sbjct: 331 PNAVSLDLLSDEVRNNEDLF---PSDEVLARCEGIAPIGDATDLYDEYW 376
>gi|333926484|ref|YP_004500063.1| family 1 extracellular solute-binding protein [Serratia sp. AS12]
gi|333931437|ref|YP_004505015.1| ABC transporter substrate-binding protein [Serratia plymuthica AS9]
gi|386328307|ref|YP_006024477.1| extracellular solute-binding protein [Serratia sp. AS13]
gi|333473044|gb|AEF44754.1| extracellular solute-binding protein family 1 [Serratia plymuthica
AS9]
gi|333490544|gb|AEF49706.1| extracellular solute-binding protein family 1 [Serratia sp. AS12]
gi|333960640|gb|AEG27413.1| extracellular solute-binding protein family 1 [Serratia sp. AS13]
Length = 369
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 97/218 (44%), Gaps = 40/218 (18%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS N A
Sbjct: 154 APVDSWDLILKPENLEKLKSCGVSFLDAPSEVYATVLHYLGKDPNSTN-----AADYTGA 208
Query: 71 QQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVP 123
+L L L R F S+ Y+ GD+ VA+GWS DV+ A R NVA +P
Sbjct: 209 ANDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWSGDVMQAANRAKEAKNGVNVAYAIP 268
Query: 124 KSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGAS 183
K GA + D++A+PA ++ + +Q++ F L K +V+ G S
Sbjct: 269 KEGALTYFDMFAMPADAKNKDAA------------YQFLNFLL--------KPDVMAGIS 308
Query: 184 PSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILAR 221
VK L+ + N+ PPA++ A+
Sbjct: 309 NFVYYANAVKDSTPLVNADIRNNPNVY---PPADLRAK 343
>gi|157369888|ref|YP_001477877.1| putrescine ABC transporter periplasmic-binding protein [Serratia
proteamaculans 568]
gi|157321652|gb|ABV40749.1| extracellular solute-binding protein family 1 [Serratia
proteamaculans 568]
Length = 369
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 40/218 (18%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS N A
Sbjct: 154 APVDSWDLILKPENLEKLKSCGVSFLDAPSEVYATVLHYLGKDPNSTN-----AADYTGA 208
Query: 71 QQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVP 123
+L L L R F S+ Y+ GD+ VA+GWS DV+ A R NVA +P
Sbjct: 209 ANDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWSGDVMQAANRAKEAKNGVNVAYAIP 268
Query: 124 KSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGAS 183
K GA + D++A+PA ++ + +Q++ F + K +V+ G S
Sbjct: 269 KEGALTYFDMFAMPADAKNKDAA------------YQFLNFLM--------KPDVMAGIS 308
Query: 184 PSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILAR 221
VK L+ + + N+ PPA++ A+
Sbjct: 309 NFVYYANAVKDSTPLVNAEVRNNPNVY---PPADLRAK 343
>gi|386825143|ref|ZP_10112270.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Serratia plymuthica PRI-2C]
gi|386378000|gb|EIJ18810.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Serratia plymuthica PRI-2C]
Length = 369
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 40/218 (18%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P E+ +VL Y+G NS N A
Sbjct: 154 APVDSWDLILKPENLEKLKSCGVSFLDAPSEIYATVLHYLGKDPNSTN-----AADYTGA 208
Query: 71 QQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVP 123
+L L L R F S+ Y+ GD+ VA+GWS DV+ A R NVA +P
Sbjct: 209 ANDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWSGDVMQAANRAKEAKNGVNVAYTIP 268
Query: 124 KSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGAS 183
K GA + D++A+PA ++ + +Q++ F L K +V+ G S
Sbjct: 269 KEGALTYFDMFAMPADAKNKDAA------------YQFLNFLL--------KPDVMAGIS 308
Query: 184 PSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILAR 221
VK L+ + N+ PPA++ A+
Sbjct: 309 NFVYYANAVKDSTPLVNADIRNNPNVY---PPADLRAK 343
>gi|427708603|ref|YP_007050980.1| extracellular solute-binding protein [Nostoc sp. PCC 7107]
gi|427361108|gb|AFY43830.1| extracellular solute-binding protein family 1 [Nostoc sp. PCC 7107]
Length = 360
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 107/216 (49%), Gaps = 34/216 (15%)
Query: 19 EDWKDLWRPE--LAGRISMVNSPREVIGSVLKYMGASYNS-NNIDLQVAGGKISVQQNLA 75
EDW LW+ + L R++++N REV+G+VL+ +G SYNS +L+ A K+ QQ
Sbjct: 160 EDWDYLWQNQSILNKRMTLLNDVREVMGAVLRMLGYSYNSKEEEELKQAYNKL--QQLKP 217
Query: 76 LLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWA 135
+A+ FD+ + GD+ +A+ +S+D + +K V+P+SG+SLW D
Sbjct: 218 AIAS----FDTDAWQNQILSGDLVLAMCYSADAIRVIKENPKFKYVIPRSGSSLWTDTIV 273
Query: 136 IPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEV-IPGASPSALETTLVKL 194
+P ++ I G + WI F LQ A Q + I + + E +L
Sbjct: 274 VPKSA----PNIDG--------AYAWINFILQPEVAAIISQNLNISTPNGAGFE----QL 317
Query: 195 PEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSE 230
P++L K NL P A +L +CE + PL +
Sbjct: 318 PKKLQDNK-----NLF---PEAALLEKCERITPLGD 345
>gi|423509201|ref|ZP_17485732.1| hypothetical protein IG3_00698 [Bacillus cereus HuA2-1]
gi|402456492|gb|EJV88265.1| hypothetical protein IG3_00698 [Bacillus cereus HuA2-1]
Length = 349
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K ++ AP W DLW + G ++++N REV+G LK G S NS D Q
Sbjct: 137 IAYNKKYVKE---APTS-WNDLWNDKYKGHVTLLNDSREVLGMGLKKNGFS-NSTKEDAQ 191
Query: 63 VAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ +Q+ L LLA FD+ + + F D W+ WS D K +V V
Sbjct: 192 LKTASNDLQKLLPNLLA-----FDTDNIKQKFITADAWIGTVWSGDAAFIAKDNKDVGYV 246
Query: 122 VPKSGASLWADLWAIPAASR 141
VPK G ++WAD AIP ++
Sbjct: 247 VPKEGGTIWADTLAIPKGAK 266
>gi|228984460|ref|ZP_04144638.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228775326|gb|EEM23714.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 349
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K ++ AP W DLW + G ++++N REV+G LK G S NS D Q
Sbjct: 137 IAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVVGMGLKKHGFS-NSTKDDAQ 191
Query: 63 VAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ +Q+ L LLA FD+ + + F D W+ WS D K +V V
Sbjct: 192 LKTAATDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYV 246
Query: 122 VPKSGASLWADLWAIPAASR 141
VPK G ++WAD AIP ++
Sbjct: 247 VPKEGGTIWADTLAIPKGAK 266
>gi|357385895|ref|YP_004900619.1| putrescine ABC transporter putrescine-binding protein PotF
[Pelagibacterium halotolerans B2]
gi|351594532|gb|AEQ52869.1| putrescine ABC transporter putrescine-binding protein PotF
[Pelagibacterium halotolerans B2]
Length = 363
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 76/135 (56%), Gaps = 18/135 (13%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKIS 69
P++ W L+ PE+A + IS++++P E++ + L Y+G NS DL+ A
Sbjct: 149 GPLQSWDLLFDPEIAAQLADCGISVLDAPVEMVAAALNYLGLDPNSETPEDLEAA----- 203
Query: 70 VQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVP 123
+Q +A + R+F+S+ Y+ G++ +AVG+S DV A R + +A V+P
Sbjct: 204 -EQLIASIRPHIRMFNSSQYISDLANGEICLAVGYSGDVFIAADRAAEAGQGVEIAYVIP 262
Query: 124 KSGASLWADLWAIPA 138
+ GASLW D+ AIPA
Sbjct: 263 EEGASLWFDMMAIPA 277
>gi|434404601|ref|YP_007147486.1| spermidine/putrescine-binding periplasmic protein [Cylindrospermum
stagnale PCC 7417]
gi|428258856|gb|AFZ24806.1| spermidine/putrescine-binding periplasmic protein [Cylindrospermum
stagnale PCC 7417]
Length = 361
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 19 EDWKDLW--RPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLA 75
EDW LW + +L R++++N REVIG+ L+ +G SYNS N +++ A K+ V
Sbjct: 161 EDWDYLWQNKEKLNKRMTLLNDVREVIGATLRMLGYSYNSQNETEIKQAYEKLKV----- 215
Query: 76 LLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWA 135
L FD+ + GD+ +A+ +S D + + + V+P+SG++LW D
Sbjct: 216 -LKPAVSAFDTDAWQNQLLAGDLLLAMCYSGDAVKMSRENPKLKFVIPRSGSTLWTDNLV 274
Query: 136 IPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLP 195
IP + + G + WI + LQ + F E + A+P++ L LP
Sbjct: 275 IPK----DAPNLAG--------AYAWINWILQPEVSAQFT-ERLNIATPNSAAFDL--LP 319
Query: 196 EELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSE 230
+ L +D NL PP L +CE + PL +
Sbjct: 320 KRL-----QEDENLF---PPESSLEKCERVTPLGK 346
>gi|423366876|ref|ZP_17344309.1| hypothetical protein IC3_01978 [Bacillus cereus VD142]
gi|401086856|gb|EJP95075.1| hypothetical protein IC3_01978 [Bacillus cereus VD142]
Length = 349
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K ++ AP W DLW + G ++++N REV+G LK G S NS D Q
Sbjct: 137 IAYNKKYVKE---APTS-WNDLWNEKYKGHVTLLNDSREVLGMGLKKNGFS-NSTKEDAQ 191
Query: 63 VAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ +Q+ L LLA FD+ + + F D W+ WS D K ++ V
Sbjct: 192 LKTASADLQKLLPNLLA-----FDTDNIKQKFITADAWIGTVWSGDAAFIAKDNKDIEYV 246
Query: 122 VPKSGASLWADLWAIPAASR 141
VPK G ++WAD AIP ++
Sbjct: 247 VPKEGGTIWADTLAIPKGAK 266
>gi|402553230|ref|YP_006594501.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus FRI-35]
gi|401794440|gb|AFQ08299.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus FRI-35]
Length = 349
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K ++ AP W DLW + G ++++N REV+G LK G S NS D Q
Sbjct: 137 IAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLGMGLKKHGFS-NSTKDDAQ 191
Query: 63 VAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ +Q+ L LLA FD+ + + F D W+ WS D K +V V
Sbjct: 192 LKTAATDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYV 246
Query: 122 VPKSGASLWADLWAIPAASR 141
VPK G ++WAD AIP ++
Sbjct: 247 VPKEGGTIWADTLAIPKGAK 266
>gi|49480039|ref|YP_035515.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|52144048|ref|YP_082781.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Bacillus cereus E33L]
gi|118476862|ref|YP_894013.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus thuringiensis str. Al Hakam]
gi|196035369|ref|ZP_03102774.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
W]
gi|196046554|ref|ZP_03113779.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
03BB108]
gi|218902495|ref|YP_002450329.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus AH820]
gi|225863250|ref|YP_002748628.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Bacillus cereus 03BB102]
gi|228913957|ref|ZP_04077581.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228926418|ref|ZP_04089490.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228944986|ref|ZP_04107347.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|229120927|ref|ZP_04250169.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
95/8201]
gi|229183580|ref|ZP_04310804.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BGSC 6E1]
gi|301052926|ref|YP_003791137.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus biovar anthracis str. CI]
gi|376265229|ref|YP_005117941.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Bacillus cereus F837/76]
gi|423552877|ref|ZP_17529204.1| hypothetical protein IGW_03508 [Bacillus cereus ISP3191]
gi|49331595|gb|AAT62241.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|51977517|gb|AAU19067.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
E33L]
gi|118416087|gb|ABK84506.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis str. Al Hakam]
gi|195992046|gb|EDX56009.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
W]
gi|196022738|gb|EDX61420.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
03BB108]
gi|218536733|gb|ACK89131.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH820]
gi|225787506|gb|ACO27723.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
03BB102]
gi|228599990|gb|EEK57586.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BGSC 6E1]
gi|228662587|gb|EEL18185.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
95/8201]
gi|228814655|gb|EEM60915.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228833242|gb|EEM78807.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228845679|gb|EEM90706.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|300375095|gb|ADK03999.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
biovar anthracis str. CI]
gi|364511029|gb|AEW54428.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Bacillus cereus F837/76]
gi|401185490|gb|EJQ92584.1| hypothetical protein IGW_03508 [Bacillus cereus ISP3191]
Length = 349
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K ++ AP W DLW + G ++++N REV+G LK G S NS D Q
Sbjct: 137 IAYNKKYVKE---APTS-WTDLWNEKYKGHVTLLNDSREVLGMGLKKNGFS-NSTKDDAQ 191
Query: 63 VAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ +Q+ L LLA FD+ + + F D W+ WS D K +V V
Sbjct: 192 LKTAATDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYV 246
Query: 122 VPKSGASLWADLWAIPAASR 141
VPK G ++WAD AIP ++
Sbjct: 247 VPKEGGTIWADTLAIPKGAK 266
>gi|423576894|ref|ZP_17553013.1| hypothetical protein II9_04115 [Bacillus cereus MSX-D12]
gi|423606908|ref|ZP_17582801.1| hypothetical protein IIK_03489 [Bacillus cereus VD102]
gi|401206644|gb|EJR13432.1| hypothetical protein II9_04115 [Bacillus cereus MSX-D12]
gi|401241098|gb|EJR47490.1| hypothetical protein IIK_03489 [Bacillus cereus VD102]
Length = 349
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K ++ AP W DLW + G ++++N REV+G LK G S NS D Q
Sbjct: 137 IAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLGMGLKKHGFS-NSTKDDAQ 191
Query: 63 VAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ +Q+ L LLA FD+ + + F D W+ WS D K +V V
Sbjct: 192 LKTAATDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYV 246
Query: 122 VPKSGASLWADLWAIPAASR 141
VPK G ++WAD AIP ++
Sbjct: 247 VPKEGGTIWADTLAIPKGAK 266
>gi|384179321|ref|YP_005565083.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|324325405|gb|ADY20665.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 349
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K ++ AP W DLW + G ++++N REV+G LK G S NS D Q
Sbjct: 137 IAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLGMGLKKHGFS-NSTKDDAQ 191
Query: 63 VAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ +Q+ L LLA FD+ + + F D W+ WS D K +V V
Sbjct: 192 LKTAATDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYV 246
Query: 122 VPKSGASLWADLWAIPAASR 141
VPK G ++WAD AIP ++
Sbjct: 247 VPKEGGTIWADTLAIPKGAK 266
>gi|229029058|ref|ZP_04185157.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1271]
gi|228732338|gb|EEL83221.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1271]
Length = 349
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K ++ AP W DLW + G ++++N REV+G LK G S NS D Q
Sbjct: 137 IAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLGMGLKKHGFS-NSTKDDAQ 191
Query: 63 VAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ +Q+ L LLA FD+ + + F D W+ WS D K +V V
Sbjct: 192 LKTAATDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYV 246
Query: 122 VPKSGASLWADLWAIPAASR 141
VPK G ++WAD AIP ++
Sbjct: 247 VPKEGGTIWADTLAIPKGAK 266
>gi|42780475|ref|NP_977722.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus ATCC 10987]
gi|42736394|gb|AAS40330.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
ATCC 10987]
Length = 349
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K ++ AP W DLW + G ++++N REV+G LK G S NS D Q
Sbjct: 137 IAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLGMGLKKHGFS-NSTKDDAQ 191
Query: 63 VAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ +Q+ L LLA FD+ + + F D W+ WS D K +V V
Sbjct: 192 LKTAATDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYV 246
Query: 122 VPKSGASLWADLWAIPAASR 141
VPK G ++WAD AIP ++
Sbjct: 247 VPKEGGTIWADTLAIPKGAK 266
>gi|228932668|ref|ZP_04095542.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228826986|gb|EEM72746.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
Length = 349
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K ++ AP W DLW + G ++++N REV+G LK G S NS D Q
Sbjct: 137 IAYNKKYVKE---APTS-WTDLWNEKYKGHVTLLNDSREVLGMGLKKNGFS-NSTKDDAQ 191
Query: 63 VAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ +Q+ L LLA FD+ + + F D W+ WS D K +V V
Sbjct: 192 LKTAATDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYV 246
Query: 122 VPKSGASLWADLWAIPAASR 141
VPK G ++WAD AIP ++
Sbjct: 247 VPKEGGTIWADTLAIPKGAK 266
>gi|229084376|ref|ZP_04216656.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-44]
gi|228698916|gb|EEL51621.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-44]
Length = 360
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K ++ AP W DLW + G ++++N REV+G LK G S NS D Q
Sbjct: 148 IAYNKKYVKE---APTS-WSDLWNEKYKGHVTLLNDSREVLGMGLKKNGFS-NSTKDDAQ 202
Query: 63 VAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ +Q+ L LLA FD+ + + F D W+ WS D K +V V
Sbjct: 203 LKTAATDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVGYV 257
Query: 122 VPKSGASLWADLWAIPAASR 141
VPK G ++WAD AIP ++
Sbjct: 258 VPKEGGTIWADTLAIPKGAK 277
>gi|196040686|ref|ZP_03107985.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
NVH0597-99]
gi|229090340|ref|ZP_04221584.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-42]
gi|196028476|gb|EDX67084.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
NVH0597-99]
gi|228693034|gb|EEL46751.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-42]
Length = 349
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K ++ AP W DLW + G ++++N REV+G LK G S NS D Q
Sbjct: 137 IAYNKKYVKE---APTS-WTDLWNEKYKGHVTLLNDSREVLGMGLKKNGFS-NSTKDDAQ 191
Query: 63 VAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ +Q+ L LLA FD+ + + F D W+ WS D K +V V
Sbjct: 192 LKTAATDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYV 246
Query: 122 VPKSGASLWADLWAIPAASR 141
VPK G ++WAD AIP ++
Sbjct: 247 VPKEGGTIWADTLAIPKGAK 266
>gi|167634382|ref|ZP_02392703.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0442]
gi|170686738|ref|ZP_02877958.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0465]
gi|254682552|ref|ZP_05146413.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. CNEVA-9066]
gi|254726214|ref|ZP_05187996.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A1055]
gi|254740343|ref|ZP_05198034.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Kruger B]
gi|421637888|ref|ZP_16078485.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. BF1]
gi|167530270|gb|EDR92996.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0442]
gi|170669261|gb|EDT20004.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0465]
gi|403395447|gb|EJY92686.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. BF1]
Length = 345
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K ++ AP W DLW + G ++++N REV+G LK G S NS D Q
Sbjct: 133 IAYNKKYVKE---APTS-WTDLWNEKYKGHVTLLNDSREVLGMGLKKNGFS-NSTKDDAQ 187
Query: 63 VAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ +Q+ L LLA FD+ + + F D W+ WS D K +V V
Sbjct: 188 LKTAATDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYV 242
Query: 122 VPKSGASLWADLWAIPAASR 141
VPK G ++WAD AIP ++
Sbjct: 243 VPKEGGTIWADTLAIPKGAK 262
>gi|206977547|ref|ZP_03238441.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
H3081.97]
gi|217958863|ref|YP_002337411.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH187]
gi|222095022|ref|YP_002529082.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus Q1]
gi|375283358|ref|YP_005103796.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus NC7401]
gi|423354129|ref|ZP_17331755.1| hypothetical protein IAU_02204 [Bacillus cereus IS075]
gi|423371369|ref|ZP_17348709.1| hypothetical protein IC5_00425 [Bacillus cereus AND1407]
gi|423569696|ref|ZP_17545942.1| hypothetical protein II7_02918 [Bacillus cereus MSX-A12]
gi|206744265|gb|EDZ55678.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
H3081.97]
gi|217065950|gb|ACJ80200.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH187]
gi|221239080|gb|ACM11790.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Q1]
gi|358351884|dbj|BAL17056.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
NC7401]
gi|401087330|gb|EJP95534.1| hypothetical protein IAU_02204 [Bacillus cereus IS075]
gi|401103195|gb|EJQ11180.1| hypothetical protein IC5_00425 [Bacillus cereus AND1407]
gi|401205915|gb|EJR12713.1| hypothetical protein II7_02918 [Bacillus cereus MSX-A12]
Length = 349
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K ++ AP W DLW + G ++++N REV+G LK G S NS D Q
Sbjct: 137 IAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLGMGLKKHGFS-NSTKDDAQ 191
Query: 63 VAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ +Q+ L LLA FD+ + + F D W+ WS D K +V V
Sbjct: 192 LKTAATDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYV 246
Query: 122 VPKSGASLWADLWAIPAASR 141
VPK G ++WAD AIP ++
Sbjct: 247 VPKEGGTIWADTLAIPKGAK 266
>gi|30261391|ref|NP_843768.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. Ames]
gi|47526566|ref|YP_017915.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. 'Ames Ancestor']
gi|49184220|ref|YP_027472.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. Sterne]
gi|65318655|ref|ZP_00391614.1| COG0687: Spermidine/putrescine-binding periplasmic protein
[Bacillus anthracis str. A2012]
gi|165870372|ref|ZP_02215027.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0488]
gi|167639331|ref|ZP_02397603.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0193]
gi|170706266|ref|ZP_02896727.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0389]
gi|177651500|ref|ZP_02934289.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0174]
gi|190568736|ref|ZP_03021640.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Tsiankovskii-I]
gi|227815871|ref|YP_002815880.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Bacillus anthracis str. CDC 684]
gi|229602179|ref|YP_002865806.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0248]
gi|254733970|ref|ZP_05191684.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Western North America USA6153]
gi|254753730|ref|ZP_05205765.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Vollum]
gi|254758826|ref|ZP_05210853.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Australia 94]
gi|386735088|ref|YP_006208269.1| Extracellular solute-binding protein family 1 precursor [Bacillus
anthracis str. H9401]
gi|421507071|ref|ZP_15953992.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. UR-1]
gi|30255245|gb|AAP25254.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Ames]
gi|47501714|gb|AAT30390.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. 'Ames Ancestor']
gi|49178147|gb|AAT53523.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Sterne]
gi|164713867|gb|EDR19389.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0488]
gi|167512770|gb|EDR88144.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0193]
gi|170128800|gb|EDS97666.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0389]
gi|172082778|gb|EDT67841.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0174]
gi|190560152|gb|EDV14133.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. Tsiankovskii-I]
gi|227005570|gb|ACP15313.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. CDC 684]
gi|229266587|gb|ACQ48224.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus
anthracis str. A0248]
gi|384384940|gb|AFH82601.1| Extracellular solute-binding protein family 1 precursor [Bacillus
anthracis str. H9401]
gi|401822723|gb|EJT21872.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus anthracis str. UR-1]
Length = 345
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K ++ AP W DLW + G ++++N REV+G LK G S NS D Q
Sbjct: 133 IAYNKKYVKE---APTS-WTDLWNEKYKGHVTLLNDSREVLGMGLKKNGFS-NSTKDDAQ 187
Query: 63 VAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ +Q+ L LLA FD+ + + F D W+ WS D K +V V
Sbjct: 188 LKTAATDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYV 242
Query: 122 VPKSGASLWADLWAIPAASR 141
VPK G ++WAD AIP ++
Sbjct: 243 VPKEGGTIWADTLAIPKGAK 262
>gi|229138074|ref|ZP_04266672.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST26]
gi|229195584|ref|ZP_04322350.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
m1293]
gi|228587833|gb|EEK45885.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
m1293]
gi|228645419|gb|EEL01653.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST26]
Length = 306
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K ++ AP W DLW + G ++++N REV+G LK G S NS D Q
Sbjct: 94 IAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLGMGLKKHGFS-NSTKDDAQ 148
Query: 63 VAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ +Q+ L LLA FD+ + + F D W+ WS D K +V V
Sbjct: 149 LKTAATDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYV 203
Query: 122 VPKSGASLWADLWAIPAASR 141
VPK G ++WAD AIP ++
Sbjct: 204 VPKEGGTIWADTLAIPKGAK 223
>gi|229154954|ref|ZP_04283068.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
ATCC 4342]
gi|228628512|gb|EEK85225.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
ATCC 4342]
Length = 349
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K ++ AP W DLW + G ++++N REV+G LK G S NS D Q
Sbjct: 137 IAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLGMGLKKHGFS-NSTKDDAQ 191
Query: 63 VAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ +Q+ L LLA FD+ + + F D W+ WS D K +V V
Sbjct: 192 LKTAATDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYV 246
Query: 122 VPKSGASLWADLWAIPAASR 141
VPK G ++WAD AIP ++
Sbjct: 247 VPKEGGTIWADTLAIPKGAK 266
>gi|423420670|ref|ZP_17397759.1| hypothetical protein IE3_04142 [Bacillus cereus BAG3X2-1]
gi|401101237|gb|EJQ09228.1| hypothetical protein IE3_04142 [Bacillus cereus BAG3X2-1]
Length = 349
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K ++ AP W DLW + G ++++N REV+G LK G S NS D Q
Sbjct: 137 IAYNKKYVKE---APTS-WNDLWNEKYKGHVTLLNDSREVLGMGLKKNGFS-NSTKEDAQ 191
Query: 63 VAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ +Q+ L LLA FD+ + + F D W+ WS D K +V V
Sbjct: 192 LKTASADLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYV 246
Query: 122 VPKSGASLWADLWAIPAASR 141
VPK G ++WAD AIP ++
Sbjct: 247 VPKEGGTIWADTLAIPKGAK 266
>gi|229016632|ref|ZP_04173570.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1273]
gi|229022847|ref|ZP_04179368.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1272]
gi|228738458|gb|EEL88933.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1272]
gi|228744663|gb|EEL94727.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1273]
Length = 349
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K ++ AP W DLW + G ++++N REV+G LK G S NS D Q
Sbjct: 137 IAYNKKYVKE---APTS-WNDLWNEKYKGHVTLLNDSREVLGMGLKKNGFS-NSTKEDAQ 191
Query: 63 VAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ +Q+ L LLA FD+ + + F D W+ WS D K +V V
Sbjct: 192 LKTASADLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYV 246
Query: 122 VPKSGASLWADLWAIPAASR 141
VPK G ++WAD AIP ++
Sbjct: 247 VPKEGGTIWADTLAIPKGAK 266
>gi|423609801|ref|ZP_17585662.1| hypothetical protein IIM_00516 [Bacillus cereus VD107]
gi|401250283|gb|EJR56584.1| hypothetical protein IIM_00516 [Bacillus cereus VD107]
Length = 349
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K ++ AP W DLW + G ++++N REV+G LK G S NS D Q
Sbjct: 137 IAYNKKYVKE---APTS-WADLWNDKYKGHVTLLNDSREVLGMGLKKNGFS-NSTKDDAQ 191
Query: 63 VAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ +Q+ L LLA FD+ + + F D W+ WS D K +V V
Sbjct: 192 LKTAATDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYV 246
Query: 122 VPKSGASLWADLWAIPAASR 141
VPK G ++WAD AIP ++
Sbjct: 247 VPKEGGTIWADTLAIPKGAK 266
>gi|228920100|ref|ZP_04083449.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|423579582|ref|ZP_17555693.1| hypothetical protein IIA_01097 [Bacillus cereus VD014]
gi|423637961|ref|ZP_17613614.1| hypothetical protein IK7_04370 [Bacillus cereus VD156]
gi|228839556|gb|EEM84848.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|401218044|gb|EJR24729.1| hypothetical protein IIA_01097 [Bacillus cereus VD014]
gi|401272763|gb|EJR78754.1| hypothetical protein IK7_04370 [Bacillus cereus VD156]
Length = 349
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 71/140 (50%), Gaps = 11/140 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K ++ AP W DLW + GR++++N REV+G LK G S NS D Q
Sbjct: 137 IAYNKKYVKE---APTS-WADLWNEKYKGRVTLLNDSREVLGMGLKKHGFS-NSTKDDAQ 191
Query: 63 VAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ +++ L LLA FD+ + + F D W+ WS D K +V V
Sbjct: 192 LKTAADDLKKLLPNLLA-----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYV 246
Query: 122 VPKSGASLWADLWAIPAASR 141
VPK G ++WAD AIP ++
Sbjct: 247 VPKEGGTIWADTLAIPKGAK 266
>gi|154246279|ref|YP_001417237.1| extracellular solute-binding protein [Xanthobacter autotrophicus
Py2]
gi|154160364|gb|ABS67580.1| extracellular solute-binding protein family 1 [Xanthobacter
autotrophicus Py2]
Length = 368
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 72/141 (51%), Gaps = 21/141 (14%)
Query: 17 PIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQ 71
P+ W +++PE+ + + ++ P EVI S +KY+G NS N D G++
Sbjct: 150 PMNTWDIVFKPEILSKLKDCGVYFLDGPEEVIPSAMKYLGLDPNSKNPDDIAKAGEL--- 206
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS-----------NVAV 120
L + + FDS+ Y+ A GD+ +AVGWS DV A R + NVA
Sbjct: 207 --LMSVRPYIKKFDSSGYINALARGDICLAVGWSGDVFQAKTRAAEAAKKTKKPPVNVAY 264
Query: 121 VVPKSGASLWADLWAIPAASR 141
V+PK GA +W D +AIP ++
Sbjct: 265 VIPKQGALMWFDNFAIPKDAK 285
>gi|423392318|ref|ZP_17369544.1| hypothetical protein ICG_04166 [Bacillus cereus BAG1X1-3]
gi|401634965|gb|EJS52727.1| hypothetical protein ICG_04166 [Bacillus cereus BAG1X1-3]
Length = 349
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K ++ AP W DLW + G ++++N REV+G LK G S NS D Q
Sbjct: 137 IAYNKKYVKE---APTS-WNDLWNEKYKGHVTLLNDSREVLGMGLKKNGFS-NSTKEDAQ 191
Query: 63 VAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ +Q+ L LLA FD+ + + F D W+ WS D K +V +
Sbjct: 192 LKTASADLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYI 246
Query: 122 VPKSGASLWADLWAIPAASR 141
VPK G ++WAD AIP ++
Sbjct: 247 VPKEGGTIWADTLAIPKGAK 266
>gi|229132181|ref|ZP_04261039.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST196]
gi|228651328|gb|EEL07305.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST196]
Length = 349
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 62/122 (50%), Gaps = 7/122 (5%)
Query: 21 WKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLAN 79
W DLW + G ++++N REV+G LK G S NS D Q+ +Q+ L LLA
Sbjct: 151 WNDLWNEKYKGHVTLLNDSREVLGMGLKKNGFS-NSTKEDAQLKTASADLQKLLPNLLA- 208
Query: 80 QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAA 139
FD+ + + F D W+ WS D K +V VVPK G ++WAD AIP
Sbjct: 209 ----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKG 264
Query: 140 SR 141
++
Sbjct: 265 AK 266
>gi|163939195|ref|YP_001644079.1| extracellular solute-binding protein [Bacillus weihenstephanensis
KBAB4]
gi|229010675|ref|ZP_04167875.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
DSM 2048]
gi|229057017|ref|ZP_04196411.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH603]
gi|229166221|ref|ZP_04293981.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH621]
gi|423486501|ref|ZP_17463183.1| hypothetical protein IEU_01124 [Bacillus cereus BtB2-4]
gi|423492225|ref|ZP_17468869.1| hypothetical protein IEW_01123 [Bacillus cereus CER057]
gi|423500984|ref|ZP_17477601.1| hypothetical protein IEY_04211 [Bacillus cereus CER074]
gi|423516040|ref|ZP_17492521.1| hypothetical protein IG7_01110 [Bacillus cereus HuA2-4]
gi|423594690|ref|ZP_17570721.1| hypothetical protein IIG_03558 [Bacillus cereus VD048]
gi|423601276|ref|ZP_17577276.1| hypothetical protein III_04078 [Bacillus cereus VD078]
gi|423663736|ref|ZP_17638905.1| hypothetical protein IKM_04133 [Bacillus cereus VDM022]
gi|423667066|ref|ZP_17642095.1| hypothetical protein IKO_00763 [Bacillus cereus VDM034]
gi|423676900|ref|ZP_17651839.1| hypothetical protein IKS_04443 [Bacillus cereus VDM062]
gi|163861392|gb|ABY42451.1| extracellular solute-binding protein family 1 [Bacillus
weihenstephanensis KBAB4]
gi|228617319|gb|EEK74384.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH621]
gi|228720294|gb|EEL71870.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH603]
gi|228750640|gb|EEM00466.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
DSM 2048]
gi|401154308|gb|EJQ61726.1| hypothetical protein IEY_04211 [Bacillus cereus CER074]
gi|401156509|gb|EJQ63913.1| hypothetical protein IEW_01123 [Bacillus cereus CER057]
gi|401165883|gb|EJQ73193.1| hypothetical protein IG7_01110 [Bacillus cereus HuA2-4]
gi|401223642|gb|EJR30210.1| hypothetical protein IIG_03558 [Bacillus cereus VD048]
gi|401230703|gb|EJR37209.1| hypothetical protein III_04078 [Bacillus cereus VD078]
gi|401295636|gb|EJS01260.1| hypothetical protein IKM_04133 [Bacillus cereus VDM022]
gi|401304510|gb|EJS10062.1| hypothetical protein IKO_00763 [Bacillus cereus VDM034]
gi|401307161|gb|EJS12618.1| hypothetical protein IKS_04443 [Bacillus cereus VDM062]
gi|402439282|gb|EJV71289.1| hypothetical protein IEU_01124 [Bacillus cereus BtB2-4]
Length = 349
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 62/122 (50%), Gaps = 7/122 (5%)
Query: 21 WKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLAN 79
W DLW + G ++++N REV+G LK G S NS D Q+ +Q+ L LLA
Sbjct: 151 WNDLWNEKYKGHVTLLNDSREVLGMGLKKNGFS-NSTKEDAQLKTASADLQKLLPNLLA- 208
Query: 80 QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAA 139
FD+ + + F D W+ WS D K +V VVPK G ++WAD AIP
Sbjct: 209 ----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKG 264
Query: 140 SR 141
++
Sbjct: 265 AK 266
>gi|423460733|ref|ZP_17437530.1| hypothetical protein IEI_03873 [Bacillus cereus BAG5X2-1]
gi|401140786|gb|EJQ48342.1| hypothetical protein IEI_03873 [Bacillus cereus BAG5X2-1]
Length = 349
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K ++ AP W DLW + G ++++N REV+G LK G S NS D Q
Sbjct: 137 IAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLGMGLKKHGFS-NSTKDDAQ 191
Query: 63 VAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ +Q+ L LLA FD+ + + F D W+ WS D K +V V
Sbjct: 192 LKTAANDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYV 246
Query: 122 VPKSGASLWADLWAIPAASR 141
VPK G ++WAD AIP ++
Sbjct: 247 VPKEGGTIWADTLAIPKGAK 266
>gi|428302168|ref|YP_007140474.1| extracellular solute-binding protein [Calothrix sp. PCC 6303]
gi|428238712|gb|AFZ04502.1| extracellular solute-binding protein family 1 [Calothrix sp. PCC
6303]
Length = 365
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 106/226 (46%), Gaps = 35/226 (15%)
Query: 16 APIEDWKDLW--RPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQN 73
P EDW+ +W R L R++++N REV+G+ LK +G SYN+ + + Q+ + +
Sbjct: 162 TPPEDWEYIWQNRDILNKRMTLMNDSREVMGAALKMLGYSYNATD-ETQIK----AAYEK 216
Query: 74 LALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADL 133
L + + FD+ + GD+ +A+ +SSD + K + V+PKSG SLW D
Sbjct: 217 LKEIKDSISSFDTDAWRSKIVTGDLDLAMSYSSDAIKLTKENPKLKYVIPKSGTSLWTDT 276
Query: 134 WAIPAASRLETKQIGGRVRGPSPL-IHQWIEFCLQTARALPFKQ-EVIPGASPSALETTL 191
I + P+P + WI + LQ + Q + + + +A E
Sbjct: 277 LVIMKTA-------------PNPDGAYAWINYLLQPEVSAKLTQNQSLATPNRAAFE--- 320
Query: 192 VKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
+LP + +TNL P +L +C+ + PL + TL YE
Sbjct: 321 -QLPAAI-----QNNTNLF---PSQSLLEKCDRMSPLGD-TLEIYE 356
>gi|229160340|ref|ZP_04288338.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
R309803]
gi|228623064|gb|EEK79892.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
R309803]
Length = 349
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 63/122 (51%), Gaps = 7/122 (5%)
Query: 21 WKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLAN 79
W DLW + G ++++N REV+G LK G S NS +D ++ +Q+ L LLA
Sbjct: 151 WADLWNEKYKGHVTLLNDSREVLGMGLKKNGFS-NSTKVDAELKTASNDLQKLLPNLLA- 208
Query: 80 QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAA 139
FD+ + + F D W+ WS D K +V VVPK G ++WAD AIP
Sbjct: 209 ----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKG 264
Query: 140 SR 141
++
Sbjct: 265 AK 266
>gi|47566174|ref|ZP_00237202.1| PotD [Bacillus cereus G9241]
gi|47556727|gb|EAL15058.1| PotD [Bacillus cereus G9241]
Length = 349
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 62/122 (50%), Gaps = 7/122 (5%)
Query: 21 WKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLAN 79
W DLW + G ++++N REV+G LK G S NS D Q+ +Q+ L LLA
Sbjct: 151 WADLWNEKYKGHVTLLNDSREVLGMGLKKHGFS-NSTKDDAQLKTAATDLQKLLPNLLA- 208
Query: 80 QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAA 139
FD+ + + F D W+ WS D K +V VVPK G ++WAD AIP
Sbjct: 209 ----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYVVPKEGGTIWADTLAIPKG 264
Query: 140 SR 141
++
Sbjct: 265 AK 266
>gi|229074647|ref|ZP_04207670.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock4-18]
gi|229095872|ref|ZP_04226851.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-29]
gi|229101987|ref|ZP_04232701.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-28]
gi|229114826|ref|ZP_04244240.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock1-3]
gi|407703754|ref|YP_006827339.1| glycolate oxidase [Bacillus thuringiensis MC28]
gi|423380811|ref|ZP_17358095.1| hypothetical protein IC9_04164 [Bacillus cereus BAG1O-2]
gi|423443843|ref|ZP_17420749.1| hypothetical protein IEA_04173 [Bacillus cereus BAG4X2-1]
gi|423445901|ref|ZP_17422780.1| hypothetical protein IEC_00509 [Bacillus cereus BAG5O-1]
gi|423466935|ref|ZP_17443703.1| hypothetical protein IEK_04122 [Bacillus cereus BAG6O-1]
gi|423536331|ref|ZP_17512749.1| hypothetical protein IGI_04163 [Bacillus cereus HuB2-9]
gi|423538424|ref|ZP_17514815.1| hypothetical protein IGK_00516 [Bacillus cereus HuB4-10]
gi|423544663|ref|ZP_17521021.1| hypothetical protein IGO_01098 [Bacillus cereus HuB5-5]
gi|423625631|ref|ZP_17601409.1| hypothetical protein IK3_04229 [Bacillus cereus VD148]
gi|228668891|gb|EEL24319.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock1-3]
gi|228681570|gb|EEL35733.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-28]
gi|228687705|gb|EEL41604.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock3-29]
gi|228708529|gb|EEL60679.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock4-18]
gi|401132994|gb|EJQ40627.1| hypothetical protein IEC_00509 [Bacillus cereus BAG5O-1]
gi|401177008|gb|EJQ84200.1| hypothetical protein IGK_00516 [Bacillus cereus HuB4-10]
gi|401183638|gb|EJQ90750.1| hypothetical protein IGO_01098 [Bacillus cereus HuB5-5]
gi|401254469|gb|EJR60698.1| hypothetical protein IK3_04229 [Bacillus cereus VD148]
gi|401631563|gb|EJS49360.1| hypothetical protein IC9_04164 [Bacillus cereus BAG1O-2]
gi|402411975|gb|EJV44337.1| hypothetical protein IEA_04173 [Bacillus cereus BAG4X2-1]
gi|402414739|gb|EJV47066.1| hypothetical protein IEK_04122 [Bacillus cereus BAG6O-1]
gi|402461168|gb|EJV92882.1| hypothetical protein IGI_04163 [Bacillus cereus HuB2-9]
gi|407381439|gb|AFU11940.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis MC28]
Length = 349
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K ++ AP W DLW + G ++++N REV+G LK G S NS D +
Sbjct: 137 IAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLGMGLKKHGFS-NSTKDDAE 191
Query: 63 VAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ +Q+ L LLA FD+ + + F D W+ WS D K +V V
Sbjct: 192 LKTAATDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYV 246
Query: 122 VPKSGASLWADLWAIPAASR 141
VPK G ++WAD AIP ++
Sbjct: 247 VPKEGGTIWADTLAIPKGAK 266
>gi|237809505|ref|YP_002893945.1| extracellular solute-binding protein [Tolumonas auensis DSM 9187]
gi|237501766|gb|ACQ94359.1| extracellular solute-binding protein family 1 [Tolumonas auensis
DSM 9187]
Length = 366
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 71/135 (52%), Gaps = 16/135 (11%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
++ W +++PE + +S +N+P E++ + L YMG NS N GK+
Sbjct: 154 LDSWDAVFKPENLAKLKKCGVSFLNAPTEIMATALHYMGKDPNSTNPADYREAGKL---- 209
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM----SNVAV--VVPKSG 126
L+ L F S+ Y+ GD+ VA+GWS DV+ A R +NV V V+PK G
Sbjct: 210 -LSTLRPHISYFHSSQYINDLANGDICVAIGWSGDVMQAAARAEEAKNNVTVDYVIPKEG 268
Query: 127 ASLWADLWAIPAASR 141
A ++ D+ AIPA S+
Sbjct: 269 ALVFYDMLAIPADSK 283
>gi|423472737|ref|ZP_17449480.1| hypothetical protein IEM_04042 [Bacillus cereus BAG6O-2]
gi|402427298|gb|EJV59407.1| hypothetical protein IEM_04042 [Bacillus cereus BAG6O-2]
Length = 349
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 62/122 (50%), Gaps = 7/122 (5%)
Query: 21 WKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLAN 79
W DLW + G ++++N REV+G LK G S NS D Q+ +Q+ L LLA
Sbjct: 151 WNDLWNEKYKGHVTLLNDSREVLGMGLKKNGFS-NSTKEDAQLKTASNDLQKLLPNLLA- 208
Query: 80 QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAA 139
FD+ + + F D W+ WS D K +V VVPK G ++WAD AIP
Sbjct: 209 ----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKG 264
Query: 140 SR 141
++
Sbjct: 265 AK 266
>gi|423481266|ref|ZP_17457956.1| hypothetical protein IEQ_01044 [Bacillus cereus BAG6X1-2]
gi|401146026|gb|EJQ53546.1| hypothetical protein IEQ_01044 [Bacillus cereus BAG6X1-2]
Length = 349
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 62/122 (50%), Gaps = 7/122 (5%)
Query: 21 WKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLAN 79
W DLW + G ++++N REV+G LK G S NS D Q+ +Q+ L LLA
Sbjct: 151 WNDLWNEKYKGHVTLLNDSREVLGMGLKKNGFS-NSTKEDAQLKTASNDLQKLLPNLLA- 208
Query: 80 QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAA 139
FD+ + + F D W+ WS D K +V VVPK G ++WAD AIP
Sbjct: 209 ----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKG 264
Query: 140 SR 141
++
Sbjct: 265 AK 266
>gi|423618467|ref|ZP_17594301.1| hypothetical protein IIO_03793 [Bacillus cereus VD115]
gi|401254198|gb|EJR60434.1| hypothetical protein IIO_03793 [Bacillus cereus VD115]
Length = 349
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K ++ AP W DLW + G ++++N REV+G LK G S NS D +
Sbjct: 137 IAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLGMGLKKHGFS-NSTKDDAE 191
Query: 63 VAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ +Q+ L LLA FD+ + + F D W+ WS D K +V V
Sbjct: 192 LKTAATDLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYV 246
Query: 122 VPKSGASLWADLWAIPAASR 141
VPK G ++WAD AIP ++
Sbjct: 247 VPKEGGTIWADTLAIPKGAK 266
>gi|423455165|ref|ZP_17432018.1| hypothetical protein IEE_03909 [Bacillus cereus BAG5X1-1]
gi|401134948|gb|EJQ42555.1| hypothetical protein IEE_03909 [Bacillus cereus BAG5X1-1]
Length = 349
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 62/122 (50%), Gaps = 7/122 (5%)
Query: 21 WKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLAN 79
W DLW + G ++++N REV+G LK G S NS D Q+ +Q+ L LLA
Sbjct: 151 WNDLWNEKYKGHVTLLNDSREVLGMGLKKNGFS-NSTKEDAQLKTASNDLQKLLPNLLA- 208
Query: 80 QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAA 139
FD+ + + F D W+ WS D K +V VVPK G ++WAD AIP
Sbjct: 209 ----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKG 264
Query: 140 SR 141
++
Sbjct: 265 AK 266
>gi|119483298|ref|ZP_01618712.1| extracellular solute-binding protein, family 1 [Lyngbya sp. PCC
8106]
gi|119458065|gb|EAW39187.1| extracellular solute-binding protein, family 1 [Lyngbya sp. PCC
8106]
Length = 367
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 32/214 (14%)
Query: 19 EDWKDLW--RPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLAL 76
+DWK LW + E++ R +++N REV+G+ L+ +G SYNS + Q+ + LA
Sbjct: 166 QDWKYLWEHQREISKRFTLLNDVREVMGATLRMLGYSYNSTDPQ-QIR----QAYEKLAE 220
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
L F + + +GD+ +A+ +S+D + ++ + PKSG+SLW D I
Sbjct: 221 LQPAIASFTTDAWRPQIIVGDLLMAMCYSADAAEIMPENEDLRYITPKSGSSLWTDTLVI 280
Query: 137 PAASRLETKQIGGRVRGPSPL-IHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLP 195
P ++ P+P +QW+ F LQ A E + A+PS L KLP
Sbjct: 281 PKSA-------------PNPDGAYQWMNFMLQPEIAAQVV-ERLSFATPSQL--AFRKLP 324
Query: 196 EELLKGKPSQDTNLIVGVPPAEILARCEFLEPLS 229
+ L D L PP ++ R E L P+S
Sbjct: 325 KSL-----RDDPTLF---PPESVIERSESLAPIS 350
>gi|423555852|ref|ZP_17532155.1| hypothetical protein II3_01057 [Bacillus cereus MC67]
gi|401196194|gb|EJR03140.1| hypothetical protein II3_01057 [Bacillus cereus MC67]
Length = 349
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 62/122 (50%), Gaps = 7/122 (5%)
Query: 21 WKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLAN 79
W DLW + G ++++N REV+G LK G S NS D Q+ +Q+ L LLA
Sbjct: 151 WNDLWNEKYKGHVTLLNDSREVLGMGLKKNGFS-NSTKEDAQLKTASNDLQKLLPNLLA- 208
Query: 80 QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAA 139
FD+ + + F D W+ WS D K +V VVPK G ++WAD AIP
Sbjct: 209 ----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKG 264
Query: 140 SR 141
++
Sbjct: 265 AK 266
>gi|320353641|ref|YP_004194980.1| family 1 extracellular solute-binding protein [Desulfobulbus
propionicus DSM 2032]
gi|320122143|gb|ADW17689.1| extracellular solute-binding protein family 1 [Desulfobulbus
propionicus DSM 2032]
Length = 350
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 100/217 (46%), Gaps = 32/217 (14%)
Query: 23 DLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID-LQVAGGKISVQQNLALLANQA 81
DLW+PEL G++ + N PREV+G LK +G S N + + L+ A + L L Q
Sbjct: 155 DLWKPELKGKLLLPNDPREVMGIGLKVLGYSINEKDPEHLRQA------FERLQSLMPQV 208
Query: 82 RLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP-AAS 140
R+FDS +A G+V + W+ + A + + P G SLW D + IP A+
Sbjct: 209 RVFDSDSPKQALLSGEVAAGLVWNGEAYVANNENKAIHYLYPPEGFSLWVDSFCIPKGAA 268
Query: 141 RLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLK 200
+E H++I++ L+ + Q + +SP+A LP E+
Sbjct: 269 HVEAA-------------HRFIDYVLRPQVSAIISQS-MGYSSPNA--KVFDFLPAEM-- 310
Query: 201 GKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
N IV P E AR EFL+ L E TL YE
Sbjct: 311 -----KNNPIVN-PSVEDAARGEFLDSLDEQTLKIYE 341
>gi|427723684|ref|YP_007070961.1| extracellular solute-binding protein [Leptolyngbya sp. PCC 7376]
gi|427355404|gb|AFY38127.1| extracellular solute-binding protein family 1 [Leptolyngbya sp. PCC
7376]
Length = 386
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 107/230 (46%), Gaps = 34/230 (14%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWR--PELAGRISMVNSPREVIGSVLKYMGASYNSNNID 60
+ Y KS + AP DW LW +L R++++N REV+G+ LK +G SYNS +
Sbjct: 173 LIYNKSALDE---APT-DWNYLWDNADKLQRRMTLLNDVREVLGASLKSLGYSYNSTE-E 227
Query: 61 LQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAV 120
QV + + L L F+S + GD+ VA+ +SSD + N A
Sbjct: 228 AQVK----AAYERLVELRPAIASFNSDAWRTQILSGDLLVAMCYSSDANEITEEDDNFAY 283
Query: 121 VVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIP 180
VVP SG+S+WAD IP R P + W+ F ++ + Q +
Sbjct: 284 VVPSSGSSVWADTLVIP------------RTAPNVPGAYAWMSFMMRAQVSAEITQR-LS 330
Query: 181 GASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSE 230
A+P+ L LPE+ ++ P NL P +E + RCE L+PL E
Sbjct: 331 FATPNRPGYEL--LPED-VRTNP----NLF---PSSETIDRCEGLKPLGE 370
>gi|423524813|ref|ZP_17501286.1| hypothetical protein IGC_04196 [Bacillus cereus HuA4-10]
gi|401169039|gb|EJQ76286.1| hypothetical protein IGC_04196 [Bacillus cereus HuA4-10]
Length = 349
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 62/122 (50%), Gaps = 7/122 (5%)
Query: 21 WKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLAN 79
W DLW + G ++++N REV+G LK G S NS D Q+ +Q+ L LLA
Sbjct: 151 WADLWNDKYKGHVTLLNDSREVLGMGLKKNGFS-NSTKEDAQLKTASNDLQKLLPNLLA- 208
Query: 80 QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAA 139
FD+ + + F D W+ WS D K +V VVPK G ++WAD AIP
Sbjct: 209 ----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKG 264
Query: 140 SR 141
++
Sbjct: 265 AK 266
>gi|209525279|ref|ZP_03273821.1| extracellular solute-binding protein family 1 [Arthrospira maxima
CS-328]
gi|423065114|ref|ZP_17053904.1| extracellular solute-binding protein family 1 [Arthrospira
platensis C1]
gi|209494294|gb|EDZ94607.1| extracellular solute-binding protein family 1 [Arthrospira maxima
CS-328]
gi|406713407|gb|EKD08577.1| extracellular solute-binding protein family 1 [Arthrospira
platensis C1]
Length = 363
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 104/214 (48%), Gaps = 34/214 (15%)
Query: 19 EDWKDLW--RPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLA 75
EDW+DLW + +L+ R++++N REV+G+ L+ +G SYNS N ++ A Q L
Sbjct: 162 EDWEDLWTYQDQLSRRLTLLNDVREVMGASLRRLGYSYNSTNPREINQA------YQELV 215
Query: 76 LLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWA 135
L F + + +GD+ +A+ +SSD + ++ + P SG+SLW D
Sbjct: 216 KLRGAIASFTTDAWRPQMIVGDLLLAMCYSSDAAEVMPENEDLEYITPVSGSSLWIDTLV 275
Query: 136 IPAASRLETKQIGGRVRGPSPL-IHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKL 194
IP ++ P+P +QWI F L+ A E + A+PS + +L
Sbjct: 276 IPKSA-------------PNPEGAYQWINFMLRPDIATQIV-ERLSFATPSLV--AYRQL 319
Query: 195 PEELLKGKPSQDTNLIVGVPPAEILARCEFLEPL 228
P+EL +D L PP ++A E + PL
Sbjct: 320 PQEL-----REDPALF---PPESVIANSETVSPL 345
>gi|315641327|ref|ZP_07896403.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus italicus DSM
15952]
gi|315482900|gb|EFU73420.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus italicus DSM
15952]
Length = 357
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 109/234 (46%), Gaps = 34/234 (14%)
Query: 14 NLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID-LQVAGGKI-SVQ 71
N + W DLWRPEL I +++ RE+IG L +G S NS N+D L A K+ ++
Sbjct: 151 NAEDMTSWNDLWRPELKDNIMLIDGAREIIGLGLNSLGYSVNSKNMDQLNQAVAKLRTLT 210
Query: 72 QNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLW 130
N+ A++A++ +++ + VAV +S + + S++ V+PK G +LW
Sbjct: 211 PNVKAIVADEIKMYMENE--------ESAVAVTFSGEAADMMYENSHLHYVIPKEGTNLW 262
Query: 131 ADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETT 190
+D IP S+ Q G + +I F L+ A E I ++P+ E
Sbjct: 263 SDNIVIPKTSK---NQEGA---------YAFINFMLEPKNAAQ-NAEYIGYSTPN--EAA 307
Query: 191 LVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVADLQ 244
+ +P+E+++ K P E++A+ E L L Y L +L+
Sbjct: 308 MKLMPKEVVEDKQF--------YPTKEMMAKMEVYRDLGSKYLGIYNDLFLELK 353
>gi|253575509|ref|ZP_04852846.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Paenibacillus sp.
oral taxon 786 str. D14]
gi|251845156|gb|EES73167.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Paenibacillus sp.
oral taxon 786 str. D14]
Length = 335
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 70/139 (50%), Gaps = 9/139 (6%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K + I+ W+DLW PE G++ +++ REVIG LK G S +S +
Sbjct: 123 IAYNKKYVKDE----IDSWEDLWNPEYKGKVILLDDNREVIGMALKKNGYSNSSTD---- 174
Query: 63 VAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVV 122
G + ++L L FD+ + + + W+A WS D + +VA VV
Sbjct: 175 -EGEITTAVEDLKKLLPSVLAFDTDNIKQKMIQEEGWIATVWSGDASYIAQDNPDVAYVV 233
Query: 123 PKSGASLWADLWAIPAASR 141
PK G ++W+D +AIP S+
Sbjct: 234 PKEGGTIWSDNYAIPKDSK 252
>gi|229172027|ref|ZP_04299592.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
MM3]
gi|423404099|ref|ZP_17381272.1| hypothetical protein ICW_04497 [Bacillus cereus BAG2X1-2]
gi|423475271|ref|ZP_17451986.1| hypothetical protein IEO_00729 [Bacillus cereus BAG6X1-1]
gi|228611370|gb|EEK68627.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
MM3]
gi|401647306|gb|EJS64915.1| hypothetical protein ICW_04497 [Bacillus cereus BAG2X1-2]
gi|402436373|gb|EJV68404.1| hypothetical protein IEO_00729 [Bacillus cereus BAG6X1-1]
Length = 349
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K ++ AP W DLW + G ++++N REV+G LK G S NS D Q
Sbjct: 137 IAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLGMGLKKHGFS-NSTKDDTQ 191
Query: 63 VAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ +++ L LLA FD+ + + F D W+ WS D K +V V
Sbjct: 192 LKTAADDLKKLLPNLLA-----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYV 246
Query: 122 VPKSGASLWADLWAIPAASR 141
VPK G ++WAD AIP ++
Sbjct: 247 VPKEGGTIWADTLAIPKGAK 266
>gi|108805698|ref|YP_645635.1| extracellular solute-binding protein [Rubrobacter xylanophilus DSM
9941]
gi|108766941|gb|ABG05823.1| extracellular solute-binding protein, family 1 [Rubrobacter
xylanophilus DSM 9941]
Length = 363
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 102/237 (43%), Gaps = 32/237 (13%)
Query: 10 FRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKIS 69
+ + + ++ W +W PE G+I+M+N RE IG+ L +G S NS + D ++A + S
Sbjct: 155 YNRKEIGEVDSWDAMWNPEFKGKIAMLNDVRETIGAALMRLGYSINSTDPD-ELAEAEES 213
Query: 70 VQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASL 129
+++ LL F ST A GD+ + +S D A+ ++ +PK GA+
Sbjct: 214 LKEQKPLLRG---YFASTEVRPAVQNGDLLLGHVYSGDAFLAMVENEELSYAIPKPGATR 270
Query: 130 WADLWAIPAASRLETKQIGGRVRGPS-PLIHQWIEFCLQTARALPFKQEVIPGASPSALE 188
W D AIP V P L H++I + L+ P
Sbjct: 271 WTDNMAIP-------------VGAPHVDLAHEFINYILE------------PKVGAELSN 305
Query: 189 TTLVKLPEELLKGKPSQDTNLIVGVPPA-EILARCEFLEPLSEATLSDYEWLVADLQ 244
T P E ++ + G P+ E+ R + +E + EAT YE + +++
Sbjct: 306 YTYYNTPNEAALPMIDEELRRLPGYTPSQEVFGRLQVIEDVGEATRR-YERIFTEVK 361
>gi|284047717|ref|YP_003398056.1| extracellular solute-binding protein [Acidaminococcus fermentans
DSM 20731]
gi|283951938|gb|ADB46741.1| extracellular solute-binding protein family 1 [Acidaminococcus
fermentans DSM 20731]
Length = 353
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 64/131 (48%), Gaps = 5/131 (3%)
Query: 11 RKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
+K+ P W DLW P GR+ ++N REV G LK G S NS + D Q+A
Sbjct: 146 KKYVKTPPTSWNDLWDPAYKGRVILLNDSREVFGMALKKNGWSNNSTDPD-QLA----KA 200
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLW 130
Q+L LA +D+ + F + W+ WS D + + N+ V+PK G +W
Sbjct: 201 FQDLKELAPSVLAYDTDSLKQKFIAEEGWIGTMWSGDASFSYRENPNLGFVIPKEGTLVW 260
Query: 131 ADLWAIPAASR 141
AD AIP ++
Sbjct: 261 ADTLAIPKGAK 271
>gi|228957658|ref|ZP_04119405.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|423629753|ref|ZP_17605501.1| hypothetical protein IK5_02604 [Bacillus cereus VD154]
gi|228802000|gb|EEM48870.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|401266887|gb|EJR72956.1| hypothetical protein IK5_02604 [Bacillus cereus VD154]
Length = 349
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K ++ AP W DLW + G ++++N REV+G LK G S NS D Q
Sbjct: 137 IAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLGMGLKKHGFS-NSTKDDAQ 191
Query: 63 VAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ +++ L LLA FD+ + + F D W+ WS D K +V V
Sbjct: 192 LKTAADDLKKLLPNLLA-----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYV 246
Query: 122 VPKSGASLWADLWAIPAASR 141
VPK G ++WAD AIP ++
Sbjct: 247 VPKEGGTIWADTLAIPKGAK 266
>gi|423408761|ref|ZP_17385910.1| hypothetical protein ICY_03446 [Bacillus cereus BAG2X1-3]
gi|401657031|gb|EJS74543.1| hypothetical protein ICY_03446 [Bacillus cereus BAG2X1-3]
Length = 349
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 63/122 (51%), Gaps = 7/122 (5%)
Query: 21 WKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLAN 79
W+DLW + G ++++N REV+G LK G S NS D ++ +Q+ L LLA
Sbjct: 151 WEDLWNEKYKGHVTLLNDSREVLGMGLKKNGFS-NSTKEDAELKTAANDLQKLLPNLLA- 208
Query: 80 QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAA 139
FD+ + + F D W+ WS D K +V VVPK G ++WAD AIP
Sbjct: 209 ----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKG 264
Query: 140 SR 141
++
Sbjct: 265 AK 266
>gi|229143992|ref|ZP_04272408.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST24]
gi|296501969|ref|YP_003663669.1| spermidine/putrescine-binding protein [Bacillus thuringiensis
BMB171]
gi|423643567|ref|ZP_17619185.1| hypothetical protein IK9_03512 [Bacillus cereus VD166]
gi|423654168|ref|ZP_17629467.1| hypothetical protein IKG_01156 [Bacillus cereus VD200]
gi|228639389|gb|EEK95803.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-ST24]
gi|296323021|gb|ADH05949.1| spermidine/putrescine-binding protein [Bacillus thuringiensis
BMB171]
gi|401274147|gb|EJR80125.1| hypothetical protein IK9_03512 [Bacillus cereus VD166]
gi|401296635|gb|EJS02252.1| hypothetical protein IKG_01156 [Bacillus cereus VD200]
Length = 349
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K ++ AP W DLW + G ++++N REV+G LK G S NS D Q
Sbjct: 137 IAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLGMGLKKHGFS-NSTKDDAQ 191
Query: 63 VAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ +++ L LLA FD+ + + F D W+ WS D K +V V
Sbjct: 192 LKTAADDLKKLLPNLLA-----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYV 246
Query: 122 VPKSGASLWADLWAIPAASR 141
VPK G ++WAD AIP ++
Sbjct: 247 VPKEGGTIWADTLAIPKGAK 266
>gi|374855306|dbj|BAL58166.1| extracellular solute-binding protein [uncultured candidate division
OP1 bacterium]
Length = 352
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 105/237 (44%), Gaps = 44/237 (18%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPE----LAGRISMVNSPREVIGSVLKYMGASYNSNN 58
I Y K P W DL+ P+ R+SM++ PRE IG+ LKY+G S NS +
Sbjct: 138 IGYNAQKLE----TPPTSWADLFEPDRLERYKNRVSMLDDPREAIGAALKYLGYSVNSTD 193
Query: 59 -IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN 117
L+ A + VQ+ LA +DS Y GD+ VA GWS + A N
Sbjct: 194 PQQLEAAKNLLLVQK--PYLAR----YDSETYDDFLLTGDLVVAHGWSGEFAKAHVENPN 247
Query: 118 VAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQ---TARALPF 174
+ V+P+ G +WAD AI +S+ R+ L H +I+F L+ A+ + F
Sbjct: 248 IRYVIPREGGVIWADNLAILKSSQ--------RI----DLAHTFIDFLLRPTINAKIVNF 295
Query: 175 KQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEA 231
+ PS E + E++ N PP EIL + E++ + +A
Sbjct: 296 LR------YPSTNEAATAHILPEIV--------NDPAIYPPEEILEKLEWIRDVGDA 338
>gi|423397904|ref|ZP_17375105.1| hypothetical protein ICU_03598 [Bacillus cereus BAG2X1-1]
gi|401649212|gb|EJS66798.1| hypothetical protein ICU_03598 [Bacillus cereus BAG2X1-1]
Length = 349
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 63/122 (51%), Gaps = 7/122 (5%)
Query: 21 WKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNL-ALLAN 79
W+DLW + G ++++N REV+G LK G S NS D ++ +Q+ L LLA
Sbjct: 151 WEDLWNEKYKGHVTLLNDSREVLGMGLKKNGFS-NSTKEDAELKTAANDLQKLLPNLLA- 208
Query: 80 QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAA 139
FD+ + + F D W+ WS D K +V VVPK G ++WAD AIP
Sbjct: 209 ----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVGYVVPKEGGTIWADTLAIPKG 264
Query: 140 SR 141
++
Sbjct: 265 AK 266
>gi|423414921|ref|ZP_17392041.1| hypothetical protein IE1_04225 [Bacillus cereus BAG3O-2]
gi|423429297|ref|ZP_17406301.1| hypothetical protein IE7_01113 [Bacillus cereus BAG4O-1]
gi|401097841|gb|EJQ05863.1| hypothetical protein IE1_04225 [Bacillus cereus BAG3O-2]
gi|401121603|gb|EJQ29392.1| hypothetical protein IE7_01113 [Bacillus cereus BAG4O-1]
Length = 349
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K ++ AP W DLW + G ++++N REV+G LK G S NS D Q
Sbjct: 137 IAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLGVGLKKHGFS-NSTKDDAQ 191
Query: 63 VAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ +++ L LLA FD+ + + F D W+ WS D K +V V
Sbjct: 192 LKTAADDLKKLLPNLLA-----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYV 246
Query: 122 VPKSGASLWADLWAIPAASR 141
VPK G ++WAD AIP ++
Sbjct: 247 VPKEGGTIWADTLAIPKGAK 266
>gi|30019440|ref|NP_831071.1| spermidine/putrescine-binding protein [Bacillus cereus ATCC 14579]
gi|206968033|ref|ZP_03228989.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1134]
gi|218231222|ref|YP_002366071.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus B4264]
gi|228951768|ref|ZP_04113867.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|229043127|ref|ZP_04190854.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH676]
gi|229068938|ref|ZP_04202232.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
F65185]
gi|229078572|ref|ZP_04211130.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock4-2]
gi|229108843|ref|ZP_04238448.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock1-15]
gi|229126703|ref|ZP_04255715.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-Cer4]
gi|229149588|ref|ZP_04277820.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
m1550]
gi|229177795|ref|ZP_04305168.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
172560W]
gi|229189469|ref|ZP_04316486.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
ATCC 10876]
gi|365162078|ref|ZP_09358213.1| hypothetical protein HMPREF1014_03676 [Bacillus sp. 7_6_55CFAA_CT2]
gi|423423468|ref|ZP_17400499.1| hypothetical protein IE5_01157 [Bacillus cereus BAG3X2-2]
gi|423434878|ref|ZP_17411859.1| hypothetical protein IE9_01059 [Bacillus cereus BAG4X12-1]
gi|423505017|ref|ZP_17481608.1| hypothetical protein IG1_02582 [Bacillus cereus HD73]
gi|423647316|ref|ZP_17622886.1| hypothetical protein IKA_01103 [Bacillus cereus VD169]
gi|449088176|ref|YP_007420617.1| spermidine/putrescine-binding protein [Bacillus thuringiensis
serovar kurstaki str. HD73]
gi|29894984|gb|AAP08272.1| Spermidine/putrescine-binding protein [Bacillus cereus ATCC 14579]
gi|206736953|gb|EDZ54100.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH1134]
gi|218159179|gb|ACK59171.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
B4264]
gi|228594060|gb|EEK51862.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
ATCC 10876]
gi|228605586|gb|EEK63034.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
172560W]
gi|228633934|gb|EEK90531.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
m1550]
gi|228656643|gb|EEL12469.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
BDRD-Cer4]
gi|228674612|gb|EEL29851.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock1-15]
gi|228704716|gb|EEL57144.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
Rock4-2]
gi|228714222|gb|EEL66103.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
F65185]
gi|228726219|gb|EEL77449.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus cereus
AH676]
gi|228807890|gb|EEM54410.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|363619395|gb|EHL70714.1| hypothetical protein HMPREF1014_03676 [Bacillus sp. 7_6_55CFAA_CT2]
gi|401115158|gb|EJQ23011.1| hypothetical protein IE5_01157 [Bacillus cereus BAG3X2-2]
gi|401125116|gb|EJQ32876.1| hypothetical protein IE9_01059 [Bacillus cereus BAG4X12-1]
gi|401286134|gb|EJR91967.1| hypothetical protein IKA_01103 [Bacillus cereus VD169]
gi|402454883|gb|EJV86671.1| hypothetical protein IG1_02582 [Bacillus cereus HD73]
gi|449021933|gb|AGE77096.1| spermidine/putrescine-binding protein [Bacillus thuringiensis
serovar kurstaki str. HD73]
Length = 349
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K ++ AP W DLW + G ++++N REV+G LK G S NS D Q
Sbjct: 137 IAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLGVGLKKHGFS-NSTKDDAQ 191
Query: 63 VAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ +++ L LLA FD+ + + F D W+ WS D K +V V
Sbjct: 192 LKTAADDLKKLLPNLLA-----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYV 246
Query: 122 VPKSGASLWADLWAIPAASR 141
VPK G ++WAD AIP ++
Sbjct: 247 VPKEGGTIWADTLAIPKGAK 266
>gi|228990391|ref|ZP_04150356.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
pseudomycoides DSM 12442]
gi|228996492|ref|ZP_04156131.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
Rock3-17]
gi|229004143|ref|ZP_04161944.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
Rock1-4]
gi|228757004|gb|EEM06248.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
Rock1-4]
gi|228763124|gb|EEM12032.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus mycoides
Rock3-17]
gi|228768917|gb|EEM17515.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
pseudomycoides DSM 12442]
Length = 349
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K ++ AP W DLW + G ++++N REV+G LK G S NS D +
Sbjct: 137 IAYNKKYVKE---APTS-WSDLWNEKYKGHVTLLNDSREVLGVGLKKNGFS-NSTQNDAE 191
Query: 63 VAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ +Q+ L LLA FD+ + + F D W+ WS D K +V V
Sbjct: 192 LKTAAADLQKLLPNLLA-----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYV 246
Query: 122 VPKSGASLWADLWAIPAASR 141
VPK G ++WAD AIP ++
Sbjct: 247 VPKEGGTIWADTLAIPKGAK 266
>gi|428311756|ref|YP_007122733.1| spermidine/putrescine-binding periplasmic protein [Microcoleus sp.
PCC 7113]
gi|428253368|gb|AFZ19327.1| spermidine/putrescine-binding periplasmic protein [Microcoleus sp.
PCC 7113]
Length = 378
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 110/231 (47%), Gaps = 35/231 (15%)
Query: 11 RKHNLAPIEDWKDLW--RPELAGRISMVNSPREVIGSVLKYMGASYNSNNID-LQVAGGK 67
+K AP EDW LW + +L+ R++++N REV+G+ LK +G SYNS + +Q A K
Sbjct: 170 KKLKQAP-EDWSYLWENQQQLSKRMTLLNDVREVMGATLKMLGYSYNSTDPQHIQQAYQK 228
Query: 68 I-SVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSG 126
+ ++ NLA F S + GD+ VA+ +S+D + ++ VVPKSG
Sbjct: 229 LMDLKSNLAS-------FTSDAWRPQVLSGDLSVAMCYSADANEVMGENESLEYVVPKSG 281
Query: 127 ASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSA 186
+SLW D AIP ++ V G + WI F LQ A + + A+P+
Sbjct: 282 SSLWMDTLAIPKSA--------PNVEG----AYAWINFMLQPDVAAEVCKR-LSFATPN- 327
Query: 187 LETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
+E K P + PP IL CE + P+ E+ + Y+
Sbjct: 328 ---------QEAFKLLPPDVKSNQSLFPPEAILETCESIAPVPESISAVYD 369
>gi|428306605|ref|YP_007143430.1| extracellular solute-binding protein [Crinalium epipsammum PCC
9333]
gi|428248140|gb|AFZ13920.1| extracellular solute-binding protein family 1 [Crinalium epipsammum
PCC 9333]
Length = 376
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 102/222 (45%), Gaps = 32/222 (14%)
Query: 19 EDWKDLW--RPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLAL 76
+DW LW + +L+ ++++ N REV+G+ LK +G SYNS + Q+ + LA
Sbjct: 175 QDWNYLWDQQKQLSRKMTLQNDLREVMGATLKMLGYSYNSTDPQ-QIK----QAYEKLAQ 229
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
L F S + GD+ VA+ SSD + N+ V+P+SG+SLW D I
Sbjct: 230 LKPSIASFTSDAWRSQILTGDLLVAMCVSSDANDLIPEAENLQYVLPRSGSSLWTDTLVI 289
Query: 137 PAASRLETKQIGGRVRGPSP-LIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLP 195
P + P+P + WI + LQ Q + A+P+ + L LP
Sbjct: 290 PKTA-------------PNPEAAYAWINYMLQPEVTAAICQR-LSFATPNKVAFNL--LP 333
Query: 196 EELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
+ ++ P V PP +LA+CE + PL + YE
Sbjct: 334 PD-VRDNP-------VLFPPESLLAKCEGIAPLPDKVKEIYE 367
>gi|409993243|ref|ZP_11276392.1| extracellular solute-binding protein [Arthrospira platensis str.
Paraca]
gi|291569868|dbj|BAI92140.1| putative spermidine/putrescine ABC transporter substrate-binding
protein [Arthrospira platensis NIES-39]
gi|409935915|gb|EKN77430.1| extracellular solute-binding protein [Arthrospira platensis str.
Paraca]
Length = 363
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 103/214 (48%), Gaps = 34/214 (15%)
Query: 19 EDWKDLW--RPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLA 75
EDW+DLW + +L R++++N REV+G+ L+ +G SYNS N ++ A Q L
Sbjct: 162 EDWEDLWTYQDQLNRRLTLLNDVREVMGASLRRLGYSYNSTNPREINQA------YQELV 215
Query: 76 LLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWA 135
L F + + +GD+ +A+ +SSD + ++ + P SG+SLW D
Sbjct: 216 KLRGAIASFTTDAWRPQMIVGDLLLAMCYSSDAAEVMPENEDLEYITPVSGSSLWIDTLV 275
Query: 136 IPAASRLETKQIGGRVRGPSPL-IHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKL 194
IP ++ P+P +QWI F L+ A E + A+PS + +L
Sbjct: 276 IPKSA-------------PNPEGAYQWINFMLRPDIATQIV-ERLSFATPSLV--AYRQL 319
Query: 195 PEELLKGKPSQDTNLIVGVPPAEILARCEFLEPL 228
P+EL +D L PP ++A E + PL
Sbjct: 320 PQEL-----REDPALF---PPESVIANSETVSPL 345
>gi|376006159|ref|ZP_09783485.1| polyamine transporter subunit ; periplasmic-binding component of
ABC superfamily [Arthrospira sp. PCC 8005]
gi|375325462|emb|CCE19238.1| polyamine transporter subunit ; periplasmic-binding component of
ABC superfamily [Arthrospira sp. PCC 8005]
Length = 363
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 103/214 (48%), Gaps = 34/214 (15%)
Query: 19 EDWKDLW--RPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLA 75
EDW+DLW + +L R++++N REV+G+ L+ +G SYNS N ++ A Q L
Sbjct: 162 EDWEDLWTYQDQLNRRLTLLNDVREVMGASLRRLGYSYNSTNPREINQA------YQELV 215
Query: 76 LLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWA 135
L F + + +GD+ +A+ +SSD + ++ + P SG+SLW D
Sbjct: 216 KLRGAIASFTTDAWRPQMIVGDLLLAMCYSSDAAEVMPENEDLEYITPVSGSSLWIDTLV 275
Query: 136 IPAASRLETKQIGGRVRGPSPL-IHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKL 194
IP ++ P+P +QWI F L+ A E + A+PS + +L
Sbjct: 276 IPKSA-------------PNPEGAYQWINFMLRPDIATQIV-ERLSFATPSLV--AYRQL 319
Query: 195 PEELLKGKPSQDTNLIVGVPPAEILARCEFLEPL 228
P+EL +D L PP ++A E + PL
Sbjct: 320 PQEL-----REDPALF---PPESVIANSETVSPL 345
>gi|158321557|ref|YP_001514064.1| extracellular solute-binding protein [Alkaliphilus oremlandii
OhILAs]
gi|158141756|gb|ABW20068.1| extracellular solute-binding protein family 1 [Alkaliphilus
oremlandii OhILAs]
Length = 348
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 107/214 (50%), Gaps = 33/214 (15%)
Query: 17 PIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNS-NNIDLQVAGGKISVQQNLA 75
P++ W+ LW + AG+I M++S R+ IG LK +G S NS ++ +L++A ++ Q+ L
Sbjct: 148 PVDSWELLWDEKYAGQILMMDSQRDSIGITLKKLGFSVNSRDSKELELAKQELIRQKPLV 207
Query: 76 LLANQARLFDSTHYLKAFGI-GDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 134
+ A + D +K I G+ +A+ WS D + + + +A VVPK G++LW D
Sbjct: 208 M----AYVVDE---VKDMMIGGEAAIAIAWSGDAMLMMGQNEKLAYVVPKEGSNLWFDNM 260
Query: 135 AIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKL 194
IP +++ L ++I F + +L E I ++P+ T+ L
Sbjct: 261 VIPKSAK------------NKELAEKFINFMTRPEISLK-NVEYIEYSTPNT--GTMELL 305
Query: 195 PEELLKGKPSQDTNLIVGVPPAEILARCE-FLEP 227
EELL N V P +I+ CE FL+P
Sbjct: 306 DEELL--------NNPVAYPSDDIVDNCEVFLDP 331
>gi|28900222|ref|NP_799877.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus RIMD 2210633]
gi|260361653|ref|ZP_05774680.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus K5030]
gi|260880784|ref|ZP_05893139.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus AN-5034]
gi|260896506|ref|ZP_05905002.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus Peru-466]
gi|260899480|ref|ZP_05907875.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus AQ4037]
gi|28808533|dbj|BAC61710.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus RIMD 2210633]
gi|308089236|gb|EFO38931.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus Peru-466]
gi|308092107|gb|EFO41802.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus AN-5034]
gi|308109246|gb|EFO46786.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus AQ4037]
gi|308112748|gb|EFO50288.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus K5030]
Length = 344
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 103/239 (43%), Gaps = 40/239 (16%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
I+Y +S + P+ W DLW + ++ +++ R+V G LK G S N+ +
Sbjct: 133 ISYNESMVEQ----PVTKWADLWESQYEQQVMLIDDVRDVFGMALKKNGHSVNTKD---- 184
Query: 63 VAGGKISVQQ---NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVA 119
+ ++Q +L L N L++S + G+ V + W+ + M +
Sbjct: 185 ----EAEIKQAFDSLVALKNNVLLYNSDAPQVPYVSGETSVGMQWNGNAFQGQVEMPELK 240
Query: 120 VVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVI 179
V+P+ GA LW D + IP+ S+ +T L H++I F Q+ + E++
Sbjct: 241 FVMPEEGAVLWMDNFTIPSGSKNKT------------LAHKFINFMYQSEN----QAEIV 284
Query: 180 PG-ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
SA KLPEEL + P +E + + EF+ + TL+ YE
Sbjct: 285 TSLGYASATNAGRDKLPEELKNNRTI--------FPSSEDMKKGEFINDVGAETLAIYE 335
>gi|119510563|ref|ZP_01629694.1| extracellular solute-binding protein, family 1 [Nodularia spumigena
CCY9414]
gi|119464830|gb|EAW45736.1| extracellular solute-binding protein, family 1 [Nodularia spumigena
CCY9414]
Length = 360
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 108/229 (47%), Gaps = 36/229 (15%)
Query: 5 YKKSKFRKHNLAPIEDWKDLWRPE--LAGRISMVNSPREVIGSVLKYMGASYNSNNID-L 61
Y +K + P +DW LW+ + L RI+++N REV+G VL+ +G SYNS + + +
Sbjct: 150 YNSAKLKN----PPQDWDYLWQNQELLNRRITLLNDVREVMGGVLRMLGYSYNSQDENQI 205
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
Q A K+ V+ A+ + F++ + GD+ +A+ +S+D + + V
Sbjct: 206 QQAYEKL-VELKPAIAS-----FNTDAWQNQLLAGDLTLAMCYSADAIRITQENPQFKYV 259
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
+P+SG+SLW D IP ++ + G + WI + LQ A Q +
Sbjct: 260 IPRSGSSLWTDTIVIPKSA----PNLDG--------AYAWINYMLQPDIAASISQRL--- 304
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSE 230
+L T + E+L P N PP E+L +CE + PL +
Sbjct: 305 ----SLATPNMAGFEQL----PQNIQNNANWFPPQELLEKCERIAPLGD 345
>gi|227825012|ref|ZP_03989844.1| conserved hypothetical protein [Acidaminococcus sp. D21]
gi|352683976|ref|YP_004895960.1| hypothetical protein Acin_0580 [Acidaminococcus intestini RyC-MR95]
gi|226905511|gb|EEH91429.1| conserved hypothetical protein [Acidaminococcus sp. D21]
gi|350278630|gb|AEQ21820.1| conserved hypothetical protein [Acidaminococcus intestini RyC-MR95]
Length = 353
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 7/122 (5%)
Query: 21 WKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQ-QNLALLAN 79
W+DLW P GR+ ++N REVIG LK G S N+ + G+I + ++L LA
Sbjct: 156 WQDLWNPVYKGRVILLNDSREVIGMALKKHGFSNNATD------PGQIDIAFKDLKTLAP 209
Query: 80 QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAA 139
+D+ + F + W+ + WS D +V V+PK G ++WAD AIP
Sbjct: 210 NVLAYDTDSIKQKFIAEEAWIGMMWSGDAHFVHNDNPDVGFVIPKEGTTVWADTLAIPKG 269
Query: 140 SR 141
++
Sbjct: 270 AK 271
>gi|228907017|ref|ZP_04070883.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis IBL 200]
gi|228852631|gb|EEM97419.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis IBL 200]
Length = 349
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K ++ AP W DLW + G ++++N REV+G LK G S NS D +
Sbjct: 137 IAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLGMGLKKHGFS-NSTKEDAE 191
Query: 63 VAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ +++ L LLA FD+ + + F D W+ WS D K +V V
Sbjct: 192 LKTAADDLKKLLPNLLA-----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYV 246
Query: 122 VPKSGASLWADLWAIPAASR 141
VPK G ++WAD AIP ++
Sbjct: 247 VPKEGGTIWADTLAIPKGAK 266
>gi|75760662|ref|ZP_00740689.1| Spermidine/putrescine-binding protein [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|218896320|ref|YP_002444731.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus cereus G9842]
gi|228899966|ref|ZP_04064205.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis IBL 4222]
gi|228964344|ref|ZP_04125462.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar sotto str. T04001]
gi|402561620|ref|YP_006604344.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus thuringiensis HD-771]
gi|423361349|ref|ZP_17338851.1| hypothetical protein IC1_03328 [Bacillus cereus VD022]
gi|423564315|ref|ZP_17540591.1| hypothetical protein II5_03719 [Bacillus cereus MSX-A1]
gi|434374327|ref|YP_006608971.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus thuringiensis HD-789]
gi|74491843|gb|EAO55032.1| Spermidine/putrescine-binding protein [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|218543320|gb|ACK95714.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Bacillus cereus
G9842]
gi|228795353|gb|EEM42842.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar sotto str. T04001]
gi|228859677|gb|EEN04098.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis IBL 4222]
gi|401079797|gb|EJP88091.1| hypothetical protein IC1_03328 [Bacillus cereus VD022]
gi|401197346|gb|EJR04279.1| hypothetical protein II5_03719 [Bacillus cereus MSX-A1]
gi|401790272|gb|AFQ16311.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus thuringiensis HD-771]
gi|401872884|gb|AFQ25051.1| spermidine/putrescine ABC transporter substrate-binding protein
[Bacillus thuringiensis HD-789]
Length = 349
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K ++ AP W DLW + G ++++N REV+G LK G S NS D +
Sbjct: 137 IAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLGMGLKKHGFS-NSTKEDAE 191
Query: 63 VAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ +++ L LLA FD+ + + F D W+ WS D K +V V
Sbjct: 192 LKTAADDLKKLLPNLLA-----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYV 246
Query: 122 VPKSGASLWADLWAIPAASR 141
VPK G ++WAD AIP ++
Sbjct: 247 VPKEGGTIWADTLAIPKGAK 266
>gi|110632525|ref|YP_672733.1| extracellular solute-binding protein [Chelativorans sp. BNC1]
gi|110283509|gb|ABG61568.1| extracellular solute-binding protein, family 1 [Chelativorans sp.
BNC1]
Length = 365
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 100/219 (45%), Gaps = 43/219 (19%)
Query: 3 IAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNS 56
I Y K+K ++ I W +++PE+A + I ++++ E+ + L Y+G NS
Sbjct: 137 IGYNKAKVKEALGTDRINSWDVVFKPEVASKLAGCGIHVLDASSEITHAALNYLGLDPNS 196
Query: 57 NN-IDLQ-VAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 114
+N DLQ V +SV+ N+ R F S+ Y+ A GD+ VAVG+S DV A R
Sbjct: 197 DNPDDLQKVEALLLSVRPNI-------RKFHSSEYINALANGDICVAVGYSGDVFQARDR 249
Query: 115 MS------NVAVVVPKSGASLWADLWAIPA-ASRLETKQIGGRVRGPSPLIHQWIEFCLQ 167
+ +A +PK GA +W D AIPA A +E H++I + +
Sbjct: 250 AAEAGQGVEIAYAIPKEGAQMWFDQMAIPADAPHVEEA-------------HEFINYMM- 295
Query: 168 TARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQD 206
+ EVI AS K +ELL + D
Sbjct: 296 -------RPEVIAKASNYVFYANGNKASQELLDAEVIDD 327
>gi|423588228|ref|ZP_17564315.1| hypothetical protein IIE_03640 [Bacillus cereus VD045]
gi|401226736|gb|EJR33270.1| hypothetical protein IIE_03640 [Bacillus cereus VD045]
Length = 349
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 11/140 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K ++ AP W DLW + G ++++N REV+G LK G S NS D Q
Sbjct: 137 IAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLGVGLKKHGFS-NSTKDDAQ 191
Query: 63 VAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ +++ L LLA FD+ + + F D W+ WS D K +V V
Sbjct: 192 LKTAADDLKKLLPNLLA-----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYV 246
Query: 122 VPKSGASLWADLWAIPAASR 141
VPK G ++W D AIP ++
Sbjct: 247 VPKEGGTIWTDTLAIPKGAK 266
>gi|443477176|ref|ZP_21067041.1| extracellular solute-binding protein family 1 [Pseudanabaena biceps
PCC 7429]
gi|443017738|gb|ELS32116.1| extracellular solute-binding protein family 1 [Pseudanabaena biceps
PCC 7429]
Length = 382
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 30/219 (13%)
Query: 20 DWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLAN 79
DW LW+ + RI++VN PREVIG L + SYNS + Q+ +++ + +AN
Sbjct: 182 DWSYLWQHKNKLRITLVNDPREVIGMALHTLSYSYNSKE-ESQIEHAFQKLRELMPAIAN 240
Query: 80 QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAA 139
F + + GD+ + + +S D + ++ NV V+P +G S+W D AIP
Sbjct: 241 ----FSTDAWRDPLASGDLMMCMAFSGDAISLSRQNPNVKYVLPNNGTSIWTDTIAIPRG 296
Query: 140 SRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELL 199
+ I G H WI + + K E+ S + T KL + L+
Sbjct: 297 A----PNIEG--------AHAWINYVM--------KPEIAAKISDANSFGTTNKLAKSLI 336
Query: 200 KGKPSQDTNLIVGVPPAE-ILARCEFLEPLSEATLSDYE 237
D I + P+E I+A+C+ + L L Y+
Sbjct: 337 P----DDLKAIKALEPSETIIAKCDRITKLDPEALQIYD 371
>gi|228938503|ref|ZP_04101112.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|228971382|ref|ZP_04132008.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228977994|ref|ZP_04138374.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis Bt407]
gi|384185302|ref|YP_005571198.1| spermidine/putrescine-binding protein [Bacillus thuringiensis
serovar chinensis CT-43]
gi|410673593|ref|YP_006925964.1| spermidine/putrescine-binding periplasmic protein 2 [Bacillus
thuringiensis Bt407]
gi|423382787|ref|ZP_17360043.1| hypothetical protein ICE_00533 [Bacillus cereus BAG1X1-2]
gi|423530753|ref|ZP_17507198.1| hypothetical protein IGE_04305 [Bacillus cereus HuB1-1]
gi|452197614|ref|YP_007477695.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Bacillus thuringiensis serovar thuringiensis str.
IS5056]
gi|228781782|gb|EEM29980.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis Bt407]
gi|228788249|gb|EEM36202.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228821240|gb|EEM67256.1| Spermidine/putrescine abc transporter,
spermidine/putrescine-binding protein [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|326939011|gb|AEA14907.1| spermidine/putrescine-binding protein [Bacillus thuringiensis
serovar chinensis CT-43]
gi|401643647|gb|EJS61341.1| hypothetical protein ICE_00533 [Bacillus cereus BAG1X1-2]
gi|402446087|gb|EJV77951.1| hypothetical protein IGE_04305 [Bacillus cereus HuB1-1]
gi|409172722|gb|AFV17027.1| spermidine/putrescine-binding periplasmic protein 2 [Bacillus
thuringiensis Bt407]
gi|452103007|gb|AGF99946.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Bacillus thuringiensis serovar thuringiensis str.
IS5056]
Length = 349
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K ++ AP W DLW + G ++++N REV+G LK G S NS D +
Sbjct: 137 IAYNKKYVKE---APTS-WADLWNEKYKGHVTLLNDSREVLGVGLKKHGFS-NSTKEDAE 191
Query: 63 VAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ +++ L LLA FD+ + + F D W+ WS D K +V V
Sbjct: 192 LKTAADDLKKLLPNLLA-----FDTDNIKQKFITEDAWIGTVWSGDAAFIAKDNKDVEYV 246
Query: 122 VPKSGASLWADLWAIPAASR 141
VPK G ++WAD AIP ++
Sbjct: 247 VPKEGGTIWADTLAIPKGAK 266
>gi|269967211|ref|ZP_06181276.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
alginolyticus 40B]
gi|269828201|gb|EEZ82470.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
alginolyticus 40B]
Length = 344
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 102/239 (42%), Gaps = 40/239 (16%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
I+Y +S + P++ W DLW + ++ +++ R+V G LK G S N+ +
Sbjct: 133 ISYNESMVEQ----PVKKWADLWESQYEQQVMLIDDVRDVFGMALKKNGHSVNTKD---- 184
Query: 63 VAGGKISVQQ---NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVA 119
+ ++Q +L L N L++S + G+ V + W+ + M +
Sbjct: 185 ----EAEIEQAFDSLVALKNNVLLYNSDAPQVPYVSGETSVGMQWNGNAFQGQVEMPELK 240
Query: 120 VVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVI 179
V+P+ GA LW D + IP+ S+ L H++I F Q+ + E++
Sbjct: 241 FVMPEEGAVLWMDNFTIPSGSK------------NKALAHKFINFMYQSEN----QAEIV 284
Query: 180 PG-ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
SA KLPEEL + P +E + + EF+ + TL+ YE
Sbjct: 285 TSLGYASATNAGRDKLPEELKNNRTI--------FPSSEDMKKGEFINDVGAETLAIYE 335
>gi|315644532|ref|ZP_07897664.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Paenibacillus
vortex V453]
gi|315280039|gb|EFU43336.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Paenibacillus
vortex V453]
Length = 350
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K K+ + I+ W DLW PE G++ +++ RE+IG LK G S NS+ + +
Sbjct: 139 IAYNK----KYVIDEIKSWGDLWNPEYKGKVLLLDDNREMIGMALKKQGKS-NSSKDEAE 193
Query: 63 VAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVV 122
+ I+ L L FD+ + + + W+A WS D +VA VV
Sbjct: 194 I----IAASDELKTLLPNVLAFDTDNIKQKMIQEEGWIATVWSGDAAFIAAENPDVAYVV 249
Query: 123 PKSGASLWADLWAIPAASR---LETKQIGGRVRGP-SPLIHQWIEFCLQTARALPFKQEV 178
P+ GA++++D +AIP ++ L K I + S +++I + +A+ F E
Sbjct: 250 PEEGATIFSDNYAIPKGAKNKELAEKFINFMLEPEVSAKNYEFIGYSNPNTKAMEFHSEE 309
Query: 179 IPGASPSALETTLVKLPEELLK 200
T++ L EE L+
Sbjct: 310 YRA-------NTMINLTEEELR 324
>gi|302037133|ref|YP_003797455.1| polyamine ABC transporter periplasmic-binding protein PotD
[Candidatus Nitrospira defluvii]
gi|300605197|emb|CBK41530.1| Polyamine ABC transporter, periplasmic-binding protein PotD
[Candidatus Nitrospira defluvii]
Length = 349
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 7/117 (5%)
Query: 17 PIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID-LQVAGGKISVQQNLA 75
P + W LW GRISM+N REV G+VL+ MG S NS + ++ A ++ Q+ L
Sbjct: 149 PPDSWAILWDERYKGRISMLNDQREVFGAVLRSMGQSMNSTDPQVIEAAKERLLRQKPL- 207
Query: 76 LLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWAD 132
+ + S HY + G+V +A W V A+ ++ VVPK GA+LWAD
Sbjct: 208 -----VKTYTSDHYDQLLASGEVVLAHAWGGPVARAMVERPSIRYVVPKEGATLWAD 259
>gi|334119180|ref|ZP_08493267.1| extracellular solute-binding protein family 1 [Microcoleus
vaginatus FGP-2]
gi|333458651|gb|EGK87268.1| extracellular solute-binding protein family 1 [Microcoleus
vaginatus FGP-2]
Length = 376
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 98/215 (45%), Gaps = 32/215 (14%)
Query: 19 EDWKDLW--RPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLAL 76
EDW+ LW + ELA R+++ + REV+G+ L+ +G S NS N + QV + L
Sbjct: 176 EDWEYLWQHKQELAKRMTLASDVREVMGAALRMLGYSLNSTNQE-QVK----QAYEKLVE 230
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
L F + + GD+ VA+ +SSD + + VVPKSG+SLW D I
Sbjct: 231 LKPAIASFTTDAWRPQMLTGDLKVAMCYSSDANEVISDNDKLKYVVPKSGSSLWTDTLVI 290
Query: 137 PAASRLETKQIGGRVRGPSP-LIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLP 195
P S P+P ++WI F LQ A E + ++PS E LP
Sbjct: 291 PKGS-------------PNPEAAYKWINFMLQPDVAASLV-ERLSFSTPS--EDAFSLLP 334
Query: 196 EELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSE 230
E+ + + P +L +CE + P+ +
Sbjct: 335 PEVREND--------ILFPSEAVLKKCEGVAPVGK 361
>gi|310659049|ref|YP_003936770.1| polyamine transporter subunit ; periplasmic-binding component of
ABC superfamily [[Clostridium] sticklandii]
gi|308825827|emb|CBH21865.1| polyamine transporter subunit ; periplasmic-binding component of
ABC superfamily [[Clostridium] sticklandii]
Length = 345
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 70/141 (49%), Gaps = 11/141 (7%)
Query: 1 MVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-I 59
M I Y K+K ++ W LW P+ G+I M++SPR+ IG LK +G S N+ N
Sbjct: 133 MGIVYNKTKVSD----SVDSWDILWNPKYEGQIIMLDSPRDTIGITLKKLGYSLNTKNPA 188
Query: 60 DLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVA 119
+L+ A + Q+ L R ++ Y G+ +++ WS D + + ++A
Sbjct: 189 ELEEAKQALIEQKKL------VRSYEVDTYKGQMIAGEAAMSLAWSGDAMLLMSENEDLA 242
Query: 120 VVVPKSGASLWADLWAIPAAS 140
+PK G +LW D AIP +
Sbjct: 243 YAIPKEGTNLWFDCMAIPTTA 263
>gi|258646316|ref|ZP_05733785.1| spermidine/putrescine-binding periplasmic protein PotD [Dialister
invisus DSM 15470]
gi|260403707|gb|EEW97254.1| spermidine/putrescine-binding periplasmic protein PotD [Dialister
invisus DSM 15470]
Length = 353
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 66/133 (49%), Gaps = 9/133 (6%)
Query: 13 HNLAPIED----WKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKI 68
+N I+D W DLW+ E GR+ ++N REVIG LK G S NS + +
Sbjct: 144 YNTKYIKDTPSSWNDLWKDEYKGRVILLNDNREVIGMGLKKNGHSVNSKDPNEVTQ---- 199
Query: 69 SVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGAS 128
+V Q L L FD+ + F + W+ WS D K ++A ++PK GA
Sbjct: 200 AVDQ-LRKLTPNLLAFDTDTIKQKFIAEEAWIGTMWSGDASFTHKDNPDIAFIIPKEGAV 258
Query: 129 LWADLWAIPAASR 141
+WAD +AIP ++
Sbjct: 259 IWADTFAIPKGAK 271
>gi|417322038|ref|ZP_12108572.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus 10329]
gi|328470192|gb|EGF41103.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus 10329]
Length = 344
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 101/239 (42%), Gaps = 40/239 (16%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
I+Y +S + P+ W DLW + ++ +++ R+V G LK G S N+ +
Sbjct: 133 ISYNESMVEQ----PVTKWADLWESQYEQQVMLIDDVRDVFGMALKKNGHSVNTKD---- 184
Query: 63 VAGGKISVQQ---NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVA 119
+ ++Q +L L N L++S + G+ V + W+ + M +
Sbjct: 185 ----EAEIKQAFDSLVALKNNVLLYNSDAPQVPYVSGETSVGMQWNGNAFQGQVEMPELK 240
Query: 120 VVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVI 179
V+P+ GA LW D + IP+ S+ L H++I F Q+ + E++
Sbjct: 241 FVMPEEGAVLWMDNFTIPSGSK------------NKALAHKFINFMYQSEN----QAEIV 284
Query: 180 PG-ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
SA KLPEEL + P +E + + EF+ + TL+ YE
Sbjct: 285 TSLGYASATNAGRDKLPEELKNNRTI--------FPSSEDMKKGEFINDVGAETLAIYE 335
>gi|153837449|ref|ZP_01990116.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus AQ3810]
gi|149749249|gb|EDM60034.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
parahaemolyticus AQ3810]
Length = 344
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 101/239 (42%), Gaps = 40/239 (16%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
I+Y +S + P+ W DLW + ++ +++ R+V G LK G S N+ +
Sbjct: 133 ISYNESMVEQ----PVTKWADLWESQYEQQVMLIDDVRDVFGMALKKNGHSVNTKD---- 184
Query: 63 VAGGKISVQQ---NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVA 119
+ ++Q +L L N L++S + G+ V + W+ + M +
Sbjct: 185 ----EAEIKQAFDSLVALKNNVLLYNSDAPQVPYVSGETSVGMQWNGNAFQGQVEMPELK 240
Query: 120 VVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVI 179
V+P+ GA LW D + IP+ S+ L H++I F Q+ + E++
Sbjct: 241 FVMPEEGAVLWMDNFTIPSGSK------------NKALAHKFINFMYQSEN----QAEIV 284
Query: 180 PG-ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
SA KLPEEL + P +E + + EF+ + TL+ YE
Sbjct: 285 TSLGYASATNAGRDKLPEELKNNRTI--------FPSSEDMKKGEFINDVGAETLAIYE 335
>gi|91224115|ref|ZP_01259378.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
alginolyticus 12G01]
gi|433659509|ref|YP_007300368.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio parahaemolyticus BB22OP]
gi|91191026|gb|EAS77292.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
alginolyticus 12G01]
gi|432510896|gb|AGB11713.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio parahaemolyticus BB22OP]
Length = 344
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 101/239 (42%), Gaps = 40/239 (16%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
I+Y +S + P+ W DLW + ++ +++ R+V G LK G S N+ +
Sbjct: 133 ISYNESMVEQ----PVTKWADLWESQYEQQVMLIDDVRDVFGMALKKNGHSVNTKD---- 184
Query: 63 VAGGKISVQQ---NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVA 119
+ ++Q +L L N L++S + G+ V + W+ + M +
Sbjct: 185 ----EAEIKQAFDSLVALKNNVLLYNSDAPQVPYVSGETSVGMQWNGNAFQGQVEMPELK 240
Query: 120 VVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVI 179
V+P+ GA LW D + IP+ S+ L H++I F Q+ + E++
Sbjct: 241 FVMPEEGAVLWMDNFTIPSGSK------------NKALAHKFINFMYQSEN----QAEIV 284
Query: 180 PG-ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
SA KLPEEL + P +E + + EF+ + TL+ YE
Sbjct: 285 TSLGYASATNAGRDKLPEELKNNRTI--------FPSSEDMKKGEFINDVGAETLAIYE 335
>gi|365837890|ref|ZP_09379247.1| putrescine-binding periplasmic protein [Hafnia alvei ATCC 51873]
gi|364561081|gb|EHM38995.1| putrescine-binding periplasmic protein [Hafnia alvei ATCC 51873]
Length = 368
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 17/142 (11%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKIS 69
AP+ W + +PE + +S +++P E+ +VL Y+G NS++ D A +
Sbjct: 153 APVNSWDLVLKPENLEKLKSCGVSFLDAPAEIYATVLNYIGKDPNSSDANDYNGAANDL- 211
Query: 70 VQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVP 123
L L R F S+ Y+ GD+ VAVGWS DV+ A R N+A +P
Sbjct: 212 ----LLKLRPNIRYFHSSQYINDLANGDICVAVGWSGDVMQAANRAKEAKNGVNIAYSIP 267
Query: 124 KSGASLWADLWAIPAASRLETK 145
K GA ++ D++A+PA ++ T+
Sbjct: 268 KEGALVFFDVFAMPADAKNTTE 289
>gi|13475822|ref|NP_107392.1| ABC transporter substrate-binding protein [Mesorhizobium loti
MAFF303099]
gi|14026581|dbj|BAB53178.1| ABC transporter, periplasmic binding-protein [Mesorhizobium loti
MAFF303099]
Length = 365
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 16/135 (11%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
I+ W L++PE A + I++V++P E + + Y+G +S + AGG I +
Sbjct: 153 IDSWDVLFKPENAAKLKDCGINIVDAPEETVAVAMNYLGKDGDSKKKEDLEAGGDIYTK- 211
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSG 126
+ + R F+S+ Y+ GD +++GWS DVL A R NV ++P+ G
Sbjct: 212 ----IRSYVRTFNSSSYINDLANGDKCISIGWSGDVLQAKNRAKEAKNGVNVEYLIPREG 267
Query: 127 ASLWADLWAIPAASR 141
+W D AIPA ++
Sbjct: 268 TYMWFDNLAIPADAK 282
>gi|338997731|ref|ZP_08636423.1| extracellular solute-binding protein [Halomonas sp. TD01]
gi|338765360|gb|EGP20300.1| extracellular solute-binding protein [Halomonas sp. TD01]
Length = 367
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 100/226 (44%), Gaps = 40/226 (17%)
Query: 16 APIEDWKDLWRPELAGRIS-------MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKI 68
AP++ W L+ PE+ ++S M++S E++ + Y+G S S NI+ AGG++
Sbjct: 151 APVDSWALLFDPEITKQLSDAGCGLAMLDSGDEMLSPAMAYLGLSPLSENIEDLEAGGEL 210
Query: 69 SVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVV 122
+A + + F S+ Y+ GD+ VA G+S D+ A R + +
Sbjct: 211 -----IANIRDNITYFHSSRYVSDLANGDICVAAGYSGDIFQAADRAEEAGRDFTIGYSI 265
Query: 123 PKSGASLWADLWAIPA-ASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
PK GA+LW D+ A+PA A E H +I F L+ A E +
Sbjct: 266 PKEGAALWFDMMAVPADAPNTENA-------------HAFINFILEPEIAAEIS-EYVRY 311
Query: 182 ASPSALETTLVKLPEELLKG---KPSQDT--NLIVGVPPAEILARC 222
A+P+A L +ELL P D NL V V + + R
Sbjct: 312 ANPNAAANEY--LSDELLNDPAVYPETDVMQNLYVAVEKPQDVQRA 355
>gi|317491403|ref|ZP_07949839.1| extracellular solute-binding protein [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316920950|gb|EFV42273.1| extracellular solute-binding protein [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 368
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 17/142 (11%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKIS 69
AP+ W + +PE + +S +++P E+ +VL Y+G NS++ D A +
Sbjct: 153 APVNSWDLVLKPENLEKLKSCGVSFLDAPAEIYATVLNYIGKDPNSSDANDYNGAANDL- 211
Query: 70 VQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVP 123
L L R F S+ Y+ GD+ VAVGWS DV+ A R N+A +P
Sbjct: 212 ----LLKLRPNIRYFHSSQYINDLANGDICVAVGWSGDVMQAANRAKEAKNGVNIAYSIP 267
Query: 124 KSGASLWADLWAIPAASRLETK 145
K GA ++ D++A+PA ++ T+
Sbjct: 268 KEGALVFFDVFAMPADAKNTTE 289
>gi|419299149|ref|ZP_13841162.1| putrescine-binding periplasmic protein [Escherichia coli DEC11C]
gi|419873077|ref|ZP_14395081.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O103:H2 str. CVM9450]
gi|378155103|gb|EHX16163.1| putrescine-binding periplasmic protein [Escherichia coli DEC11C]
gi|388332378|gb|EIK99049.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O103:H2 str. CVM9450]
Length = 295
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 72/143 (50%), Gaps = 15/143 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASRLETKQI 147
GA + D++A+PA ++ +TK I
Sbjct: 271 EGAMAFFDVFAMPADAKKKTKPI 293
>gi|72160685|ref|YP_288342.1| polyamine-binding lipoprotein [Thermobifida fusca YX]
gi|71914417|gb|AAZ54319.1| putative polyamine-binding lipoprotein [Thermobifida fusca YX]
Length = 412
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 6/122 (4%)
Query: 22 KDLWRPELAGRISMVNSPREVIGSVLKYMG-ASYNSNNIDLQVAGGKISVQQNLALLANQ 80
KDLW PE GR+ M+ P+E+ L Y G A +S D + A + Q++ ++
Sbjct: 197 KDLWDPEFKGRVGMMRDPQEISNFALLYNGVAPEDSTPEDWEAAAEVLKKQRDDGIV--- 253
Query: 81 ARLFDSTHYLKAFGIGDVWVAVGWSSDVLPA-VKRMSNVAVVVPKSGASLWADLWAIPAA 139
R + Y++ GD+W+ + WS D+ + +N+ V+P+ GA+LW D IP
Sbjct: 254 -RAYYEQDYIQPLTNGDIWITMAWSGDIYQVNAEEGTNLKFVIPEEGATLWTDNLTIPIT 312
Query: 140 SR 141
++
Sbjct: 313 AQ 314
>gi|222100190|ref|YP_002534758.1| spermidine/putrescine ABC transporter substrate-binding protein
[Thermotoga neapolitana DSM 4359]
gi|221572580|gb|ACM23392.1| Spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Thermotoga
neapolitana DSM 4359]
Length = 335
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 97/224 (43%), Gaps = 38/224 (16%)
Query: 11 RKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKIS 69
RK+ + W R +L GR+++++ REV+G+ LKY+G S N+ N +L+ A
Sbjct: 134 RKYVKEYEKSWSIFEREDLRGRMTLLDDMREVLGAALKYLGYSVNTKNPKELEEAK---- 189
Query: 70 VQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV--KRMSNVAVVVPKSGA 127
Q L N A+ FD+T Y G+ WV G++ DV + N +PK G
Sbjct: 190 -QVVLRWKKNIAK-FDATSYADGVVTGEYWVVHGYAEDVYQRIPEGEEENFDFFIPKEGG 247
Query: 128 SLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSAL 187
+LW D IP ++ L +++I F L+ A A
Sbjct: 248 TLWIDNMVIPKGAK------------NVDLAYEFINFLLEPQNA--------------AK 281
Query: 188 ETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEA 231
+ LP ++ + +T I + E L CEF+E + EA
Sbjct: 282 IADYLGLPSPNVEARKYMETEPIYTL---EDLKNCEFIEDVGEA 322
>gi|149187665|ref|ZP_01865962.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Vibrio shilonii AK1]
gi|148838545|gb|EDL55485.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Vibrio shilonii AK1]
Length = 369
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 71/141 (50%), Gaps = 23/141 (16%)
Query: 16 APIEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W +++PE ++S +N+P E++ + L Y+G NS + + +
Sbjct: 155 APVDSWDLVFKPENMEKLSKCGVGFLNAPTEIMAAALNYIGKDPNSTDPN--------AY 206
Query: 71 QQNLALLANQAR----LFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAV 120
+++ L Q R F S+ Y+ GDV VA+GWS DVL A R + VA
Sbjct: 207 KKDALALLKQVRPYVTYFHSSQYINDLANGDVCVAIGWSGDVLQAADRAAEADNGVEVAY 266
Query: 121 VVPKSGASLWADLWAIPAASR 141
+PK GA W DL AIP ++
Sbjct: 267 SIPKEGALAWFDLMAIPKEAK 287
>gi|157375531|ref|YP_001474131.1| spermidine/putrescine-binding periplasmic protein [Shewanella
sediminis HAW-EB3]
gi|157317905|gb|ABV37003.1| spermidine/putrescine-binding periplasmic protein [Shewanella
sediminis HAW-EB3]
Length = 358
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 28/215 (13%)
Query: 17 PIEDWKDLWRP--ELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNL 74
PI WK L+ P +L G++ M++ PR++IG LK +G S NS + LQ+ + +Q
Sbjct: 154 PITHWKQLYSPAPDLKGKLGMIDEPRDLIGMGLKSLGYSANS-EVSLQLNEVEEVLQSQK 212
Query: 75 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 134
A++ + + H G++ ++ ++ D L + N+ V+P+ G ++W D
Sbjct: 213 AMVNSYIYMTLDEH--SPIVTGEILASMIYNGDALMVKEHSENLTFVLPEEGGAIWVDYL 270
Query: 135 AIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKL 194
IG + + P L + ++ F Q A Q V A+P+ L L
Sbjct: 271 T-----------IGAKAKEPD-LAYAFLNFINQAEHAAQLAQYVY-YATPNLAAEKL--L 315
Query: 195 PEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLS 229
P+E L K V P A+ L EF +PLS
Sbjct: 316 PDEFLNDK--------VIYPDADSLKNSEFYKPLS 342
>gi|83645024|ref|YP_433459.1| spermidine/putrescine-binding periplasmic protein [Hahella
chejuensis KCTC 2396]
gi|83633067|gb|ABC29034.1| Spermidine/putrescine-binding periplasmic protein [Hahella
chejuensis KCTC 2396]
Length = 349
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 42/227 (18%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALL 77
I WKDLW P+ G + + + REV LK G S NS + ++Q LL
Sbjct: 149 ITSWKDLWNPKWKGSLLLTDDVREVFHMALKINGHSGNSTD--------PAEIKQAYELL 200
Query: 78 AN---QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 134
+++S + + GDV + + W+ +V+ A + ++ + PK GA+ W D +
Sbjct: 201 KTLTPNVLVYNSDAPREPYMAGDVNLGMIWNGEVIQAQQENPDIQYIYPKEGAAFWVDSF 260
Query: 135 AIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQ---TARALPFKQEVIPGASPSALETTL 191
AIPA + + + ++I+F LQ R + F P + SAL+
Sbjct: 261 AIPAGAENKENAL------------KFIDFMLQPEIAKRCVEFIGYATP--NKSALD--- 303
Query: 192 VKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEAT--LSDY 236
L +E L+ P+ PPAE++ + +F + + EA +DY
Sbjct: 304 --LLDEKLRNNPTI-------FPPAEVIQKGDFQQDVGEAMEIYNDY 341
>gi|354586089|ref|ZP_09004762.1| extracellular solute-binding protein family 1 [Paenibacillus lactis
154]
gi|353183065|gb|EHB48597.1| extracellular solute-binding protein family 1 [Paenibacillus lactis
154]
Length = 350
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 32/229 (13%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K + I W+DLW PE G++ +++ RE+IG LK G S NS + +
Sbjct: 139 IAYNKKYVKDE----INSWEDLWNPEYKGKVLLLDDNREMIGMALKKQGKS-NSTTDEAE 193
Query: 63 VAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVV 122
+ + ++ LL N FD+ + + + W+A WS D + +VA VV
Sbjct: 194 INAAALDLK---TLLPN-VLAFDTDNIKQKMIQEEGWIATVWSGDAAFIAEENPDVAYVV 249
Query: 123 PKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGA 182
P+ GA++++D +AIP ++ L ++I F L+ + E I +
Sbjct: 250 PEEGATIFSDNYAIPKGAK------------NKELAEKFINFMLEPEVSAK-NYEYIGYS 296
Query: 183 SPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEA 231
+P+ T ++ E + +N ++ + E L R E+L+ + EA
Sbjct: 297 NPN---TKAMEFHSEDYR------SNTMINLTDEE-LGRTEWLDNVGEA 335
>gi|359786979|ref|ZP_09290052.1| extracellular solute-binding protein [Halomonas sp. GFAJ-1]
gi|359295745|gb|EHK60007.1| extracellular solute-binding protein [Halomonas sp. GFAJ-1]
Length = 367
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 98/224 (43%), Gaps = 43/224 (19%)
Query: 16 APIEDWKDLWRPELAGRIS-------MVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGK 67
AP++ W L+ PE+ +++ M++S E++ + Y+G S S NI DL+ AG
Sbjct: 151 APLDSWALLFDPEITTQLNDAGCGLAMLDSGDEMLSPAMAYLGLSPLSENIEDLEAAGEL 210
Query: 68 ISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVV 121
I A + F S+ Y+ GD+ VA G+S D+ A R +
Sbjct: 211 I------AAIRGNITYFHSSRYVSDLANGDICVAAGYSGDIFQAADRAEEAGRDFTIGYS 264
Query: 122 VPKSGASLWADLWAIPA-ASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIP 180
+PK GA+LW D+ AIPA A E H +I F L+ A E +
Sbjct: 265 IPKEGAALWFDMMAIPADAPNTENA-------------HAFINFILEPEIAAEIS-EYVR 310
Query: 181 GASPSALETTLVKLPEELLKG---KPSQDT--NLIVGVP-PAEI 218
A+P+A V EELL P D NL V V P E+
Sbjct: 311 YANPNAAANEFVS--EELLNDPAVYPETDVLQNLYVAVEKPQEV 352
>gi|386817903|ref|ZP_10105121.1| extracellular solute-binding protein family 1 [Thiothrix nivea DSM
5205]
gi|386422479|gb|EIJ36314.1| extracellular solute-binding protein family 1 [Thiothrix nivea DSM
5205]
Length = 343
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 30/210 (14%)
Query: 16 APIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNL 74
A I W DLW P+ G++ + + R + LK G S NS N +++VA Q+L
Sbjct: 141 ASITGWADLWEPKWKGKLLLTDDLRGIFDMALKKNGFSSNSTNPEEIKVA------YQDL 194
Query: 75 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 134
L R+F++ + F GDV + + WS + A K ++ + PK GASLW D
Sbjct: 195 QKLMPNVRVFNADAPREPFLAGDVNLGMIWSGEASQAQKENKDIHYIYPKEGASLWVDNL 254
Query: 135 AIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKL 194
AI A + H++I++ L+ A ++++ S T L
Sbjct: 255 AITAGAENVDNA------------HKFIDYMLRPKVA----KQMVEKLGYSTPNTAARVL 298
Query: 195 PEELLKGKPSQDTNLIVGVPPAEILARCEF 224
E ++ P + PPAEIL + EF
Sbjct: 299 VSEAIRNDP-------IIFPPAEILEKGEF 321
>gi|345887621|ref|ZP_08838790.1| hypothetical protein HMPREF0178_01564 [Bilophila sp. 4_1_30]
gi|345041620|gb|EGW45761.1| hypothetical protein HMPREF0178_01564 [Bilophila sp. 4_1_30]
Length = 345
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 14 NLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQN 73
+++ I+ WKDL RPE GR+ + + R+ G LK G S NS N D A +
Sbjct: 141 DVSTIKSWKDLARPEFKGRVLLSDDLRDTFGVGLKACGYSINSTNPDEIKAA-----YEW 195
Query: 74 LALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADL 133
L L R+FD T +AF +V + W+ D A++ ++ +VP+ G +W D
Sbjct: 196 LKALKPSVRVFDVTATKQAFISEEVVAGLAWNGDAFIAMQENPDLEFIVPEEGMLIWLDN 255
Query: 134 WAIPAASR 141
+AIPA +
Sbjct: 256 FAIPAGAE 263
>gi|427419359|ref|ZP_18909542.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 7375]
gi|425762072|gb|EKV02925.1| spermidine/putrescine-binding periplasmic protein [Leptolyngbya sp.
PCC 7375]
Length = 381
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 105/230 (45%), Gaps = 47/230 (20%)
Query: 20 DWKDLWRPE--LAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLAL 76
DW LW L+ +++M++ RE +G+VL +G SYN+ + L+ A Q L
Sbjct: 182 DWDYLWDNSDVLSRKMTMLDDVRETMGAVLSSLGYSYNATDPAQLEEA------YQKLLE 235
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
L F S + GD+ +++ +S + +P N V+P+SG+S+W D I
Sbjct: 236 LKPSLASFKSFGWQDELLSGDLLLSMVYSVEGIPVSLENPNFKYVIPESGSSVWTDTMVI 295
Query: 137 PA-ASRLETKQIGGRVRGPSPLIHQWIEFCLQ------TARALPFKQEVIPGASPSALET 189
PA A +E ++WI F LQ T L F A+P+
Sbjct: 296 PASAPNVEAA-------------YEWINFNLQPQVSKDTVERLFF-------ATPNGEAM 335
Query: 190 TLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEAT-LSDYEW 238
T+ L +ELL K NL PP +ILA+CE + P+ EA L D W
Sbjct: 336 TM--LSQELLDNK-----NLF---PPEDILAKCEGIAPVGEANALYDEYW 375
>gi|317485961|ref|ZP_07944816.1| bacterial extracellular solute-binding protein [Bilophila
wadsworthia 3_1_6]
gi|316922734|gb|EFV43965.1| bacterial extracellular solute-binding protein [Bilophila
wadsworthia 3_1_6]
Length = 345
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 14 NLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQN 73
+++ I+ WKDL RPE GR+ + + R+ G LK G S NS N D A +
Sbjct: 141 DVSTIKSWKDLARPEFKGRVLLSDDLRDTFGVGLKACGYSINSTNPDEIKAA-----YEW 195
Query: 74 LALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADL 133
L L R+FD T +AF +V + W+ D A++ ++ +VP+ G +W D
Sbjct: 196 LKALKPSVRVFDVTATKQAFISEEVVAGLAWNGDAFIAMQENPDLEFIVPEEGMLIWLDN 255
Query: 134 WAIPAASR 141
+AIPA +
Sbjct: 256 FAIPAGAE 263
>gi|313884789|ref|ZP_07818543.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Eremococcus
coleocola ACS-139-V-Col8]
gi|312619988|gb|EFR31423.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Eremococcus
coleocola ACS-139-V-Col8]
Length = 358
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 104/223 (46%), Gaps = 36/223 (16%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID---LQVAGGKISVQQNL 74
I DW DLW P G+I M++ RE+IG L+ +G Y+ N+ID ++ A K+
Sbjct: 155 IRDWADLWNPAYQGKILMIDGAREMIGIGLQSLG--YSLNDIDSSHIRAAADKMKT---- 208
Query: 75 ALLANQARLFDSTHYLKA-FGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADL 133
L+ N L T +K G+V +AV +S + A+ + ++A VVP+ G++LW D
Sbjct: 209 -LMPNVVGLI--TDEIKMHIAEGEVPLAVTFSGEAATAMDQNEDLAYVVPEKGSNLWLDT 265
Query: 134 WAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVK 193
+AIP +I V G LI+ I A A E + A+P+ +E
Sbjct: 266 FAIP--------KIADNVEGAYALINFLISKEASIANA-----EYVGYATPN-MEAK-AA 310
Query: 194 LPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDY 236
LP+E+ K P I+ + E L +A L +Y
Sbjct: 311 LPKEITDDKAF--------YPDQAIMDKLEVYRNLGQAKLIEY 345
>gi|257454396|ref|ZP_05619658.1| spermidine/putrescine-binding periplasmic protein [Enhydrobacter
aerosaccus SK60]
gi|257448162|gb|EEV23143.1| spermidine/putrescine-binding periplasmic protein [Enhydrobacter
aerosaccus SK60]
Length = 380
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 98/226 (43%), Gaps = 35/226 (15%)
Query: 16 APIEDWKDLWRPELAGRISMVNSPREVIGS---VLKYMGASYNSNNIDLQVAGGKISVQQ 72
A + W DLW+PE GR+ ++N R+V L Y G++ N I +
Sbjct: 176 ASLSSWNDLWKPEYEGRVMLMNDIRDVFTMSLLTLGYNGSTKNPEAIK--------QAYE 227
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR-MSNVAVVVPKSGASLWA 131
L L R F+S F G+ ++ + W+ +V+ A + M + V PK GA +W
Sbjct: 228 KLTKLMPNVRTFNSDAPRMPFMEGETYLGLAWNGEVIMAQDQGMPELDFVYPKEGAIMWM 287
Query: 132 DLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTL 191
D IP ++ H++I+F L+ A +E+ G SP+ E
Sbjct: 288 DNMVIPKNAKNNDNA------------HKFIDFILRPKYAAMISEEIGYG-SPN--EAAK 332
Query: 192 VKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
++P EL N IV PPA++L F E + + ++ Y+
Sbjct: 333 KEMPPELA-------NNPIV-YPPADLLKHAMFREDVGDEIMALYQ 370
>gi|157961031|ref|YP_001501065.1| extracellular solute-binding protein [Shewanella pealeana ATCC
700345]
gi|157846031|gb|ABV86530.1| extracellular solute-binding protein family 1 [Shewanella pealeana
ATCC 700345]
Length = 361
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 72/137 (52%), Gaps = 18/137 (13%)
Query: 17 PIEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISV 70
P+ W+ L++ E + S MV++P EV+ ++LKY+G + NS N+ DL++ V
Sbjct: 148 PLNTWELLFQAETVSKFSECGVAMVDAPSEVVSAMLKYLGKNPNSQNLDDLKL------V 201
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM------SNVAVVVPK 124
++ L + F S+ Y+ G++ +A+GWS DV A R NV V+PK
Sbjct: 202 EERLLAIRPYITYFHSSSYVTDLASGNICLAMGWSGDVFMAANRALEANNGVNVDYVIPK 261
Query: 125 SGASLWADLWAIPAASR 141
GA WAD + I S+
Sbjct: 262 EGAQGWADTFNITNDSK 278
>gi|238753457|ref|ZP_04614820.1| Putrescine-binding periplasmic protein [Yersinia ruckeri ATCC
29473]
gi|238708410|gb|EEQ00765.1| Putrescine-binding periplasmic protein [Yersinia ruckeri ATCC
29473]
Length = 369
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 68/138 (49%), Gaps = 17/138 (12%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
API W + +PE + +S +++P E+ +VL Y G NS+N AG
Sbjct: 154 APINSWDLVLKPENLEKLKSCGVSFLDAPSEIFATVLNYQGKDPNSSN-----AGDYTGS 208
Query: 71 QQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVP 123
L L L R F S+ Y+ GD+ VAVGW+ DV+ A R NVA +P
Sbjct: 209 ATELLLKLRPNIRYFHSSQYINDLANGDICVAVGWAGDVMQASNRAKEAKNGVNVAYSIP 268
Query: 124 KSGASLWADLWAIPAASR 141
K GA + D++A+P ++
Sbjct: 269 KEGALAFFDVFAMPTDAK 286
>gi|338174752|ref|YP_004651562.1| spermidine/putrescine-binding periplasmic protein [Parachlamydia
acanthamoebae UV-7]
gi|336479110|emb|CCB85708.1| spermidine/putrescine-binding periplasmic protein [Parachlamydia
acanthamoebae UV-7]
Length = 343
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 105/235 (44%), Gaps = 40/235 (17%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
I Y+ K ++ ++P W+ R +L GR++M+N RE +G+ LK +G S NS + D Q
Sbjct: 132 IGYRIDKVQR--VSPT--WEIFARRDLKGRMTMLNDVREALGAALKSLGYSLNSTD-DFQ 186
Query: 63 VAGGK---ISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVA 119
+A I+ ++NLA FDS Y + V G+S D++ ++ +N+
Sbjct: 187 IAQAASTLINWKRNLA-------KFDSEQYKNGIASAEYLVVQGYSGDLIQVMQEDANIG 239
Query: 120 VVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPS-PLIHQWIEFCLQTARALPFKQEV 178
++ P+ G ++ D IP P L H +I F L+ RA E
Sbjct: 240 ILYPQEGTAISIDEIIIPK-------------HAPEVQLAHAFINFLLEPKRAAE-NMEF 285
Query: 179 IPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATL 233
+ SP+ T + ++ P+ + P EIL R E + LSE +
Sbjct: 286 VFFISPN---TAAAQYLSPKVRNNPALNL-------PNEILQRSEVIHDLSENNI 330
>gi|359395656|ref|ZP_09188708.1| Putrescine-binding periplasmic protein [Halomonas boliviensis LC1]
gi|357969921|gb|EHJ92368.1| Putrescine-binding periplasmic protein [Halomonas boliviensis LC1]
Length = 367
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 70/136 (51%), Gaps = 18/136 (13%)
Query: 16 APIEDWKDLWRPELAGRIS-------MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKI 68
AP++ W L+ PE+ +S M++S E++ + Y+G S NID AGG++
Sbjct: 151 APVDSWALLFDPEITAALSEAGCGLSMLDSGDEMLSPAMAYLGLDPLSENIDDLEAGGEL 210
Query: 69 SVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVV 122
+A + + F S+ Y+ GD+ V+ G+S D+ A +R ++ +
Sbjct: 211 -----IAGVRDNMTYFHSSRYVSDLANGDICVSAGYSGDIFQAAERAEEAGRDFSIGYSI 265
Query: 123 PKSGASLWADLWAIPA 138
PK GA+LW D+ A+PA
Sbjct: 266 PKEGAALWFDMMAVPA 281
>gi|282892024|ref|ZP_06300501.1| hypothetical protein pah_c205o044 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498066|gb|EFB40408.1| hypothetical protein pah_c205o044 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 343
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 105/235 (44%), Gaps = 40/235 (17%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
I Y+ K ++ ++P W+ R +L GR++M+N RE +G+ LK +G S NS + D Q
Sbjct: 132 IGYRIDKVQR--VSPT--WEIFARRDLKGRMTMLNDVREALGAALKSLGYSLNSTD-DFQ 186
Query: 63 VAGGK---ISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVA 119
+A I+ ++NLA FDS Y + V G+S D++ ++ +N+
Sbjct: 187 IAQAASTLINWKRNLA-------KFDSEQYKNGIASAEYLVVQGYSGDLIQVMQEDANIG 239
Query: 120 VVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPS-PLIHQWIEFCLQTARALPFKQEV 178
++ P+ G ++ D IP P L H +I F L+ RA E
Sbjct: 240 ILYPQEGTAISIDEIIIPK-------------HAPEVQLAHAFINFLLEPKRAAE-NMEF 285
Query: 179 IPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATL 233
+ SP+ T + ++ P+ + P EIL R E + LSE +
Sbjct: 286 VFFISPN---TAAAQYLSPKVRNNPALNL-------PNEILQRSEVIHDLSENNI 330
>gi|359792822|ref|ZP_09295616.1| family 1 extracellular solute-binding protein [Mesorhizobium alhagi
CCNWXJ12-2]
gi|359251015|gb|EHK54425.1| family 1 extracellular solute-binding protein [Mesorhizobium alhagi
CCNWXJ12-2]
Length = 366
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 76/151 (50%), Gaps = 17/151 (11%)
Query: 3 IAYKKSKFRKH-NLAPIEDWKDLWRPE----LAG-RISMVNSPREVIGSVLKYMGASYNS 56
I Y K ++ + ++ W ++PE LAG + +++SP ++I + L Y+G S S
Sbjct: 138 IGYNVDKVKEALGVDKVDSWDVFYKPENLAKLAGCGVYVLDSPSDIIPTTLNYLGLSPES 197
Query: 57 NNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS 116
+ + V++ L L R F S+ Y+ A GD+ +A+GWS DV A R +
Sbjct: 198 TS-----SEDFAKVEETLLALRPHIRKFHSSEYINALANGDICLAIGWSGDVFQARDRAA 252
Query: 117 N------VAVVVPKSGASLWADLWAIPAASR 141
V V+PK GA +W D AIPA ++
Sbjct: 253 EADQGVVVDYVIPKEGAEMWFDQMAIPADAK 283
>gi|433448387|ref|ZP_20411319.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Weissella ceti NC36]
gi|429539858|gb|ELA07892.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Weissella ceti NC36]
Length = 364
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 71/127 (55%), Gaps = 11/127 (8%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKI-SVQQNL- 74
I+ W DLWRPE +I +V+S R+++G L GAS N+ N+ +L A GK+ ++ N+
Sbjct: 162 IKTWNDLWRPEFKKKIMLVDSARDILGMTLVSNGASVNTKNLPELAAADGKLATLMPNVK 221
Query: 75 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 134
A++A++ +++ + +AV +S + + R ++ VVPK G +LW D +
Sbjct: 222 AIVADEIKMY--------MAQNEAAIAVDYSGNAAEMMSRNEHLQYVVPKEGGNLWLDNF 273
Query: 135 AIPAASR 141
IP R
Sbjct: 274 VIPKTVR 280
>gi|428211500|ref|YP_007084644.1| spermidine/putrescine-binding periplasmic protein [Oscillatoria
acuminata PCC 6304]
gi|427999881|gb|AFY80724.1| spermidine/putrescine-binding periplasmic protein [Oscillatoria
acuminata PCC 6304]
Length = 376
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 97/217 (44%), Gaps = 32/217 (14%)
Query: 16 APIEDWKDLW--RPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQN 73
P +DW+ LW + EL+ R++++N REV+G+ L+ +G SYNS + A + V
Sbjct: 172 TPPDDWEYLWTHQSELSRRLTLMNDVREVMGAGLRSLGYSYNSTDPAQLRAAYEHLVNLK 231
Query: 74 LALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADL 133
AL AN F + + GD+ VA+G+S D L ++ VVP SG+SLW D
Sbjct: 232 PAL-AN----FTTDGWRDLILAGDLEVAMGFSFDALSVSDENPDLEYVVPMSGSSLWTDT 286
Query: 134 WAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVK 193
IP + V+G + WI F Q P + +E
Sbjct: 287 MVIP--------RNAPNVQG----AYAWINFMFQ------------PQVTADLIERLYFA 322
Query: 194 LPEELLKGKPSQDTNLIVGVPPAE-ILARCEFLEPLS 229
P SQ+ + P+E +L RCE + PLS
Sbjct: 323 TPNRAAYNLLSQELRENPTLFPSESVLERCEGILPLS 359
>gi|408357686|ref|YP_006846217.1| spermidine/putrescine ABC transporter substrate-binding protein
[Amphibacillus xylanus NBRC 15112]
gi|407728457|dbj|BAM48455.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Amphibacillus xylanus NBRC 15112]
Length = 357
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 100/222 (45%), Gaps = 34/222 (15%)
Query: 21 WKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID-LQVAGGKI-SVQQNL-ALL 77
W DLW P+L I +++ REVIG L +G S N N D L A K+ ++ N+ A++
Sbjct: 158 WNDLWDPDLENGILLIDGAREVIGMGLNSLGYSLNDTNRDHLDEALEKLNTLTPNVKAIV 217
Query: 78 ANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 137
++ +L + + + V++ WS D + + VVP+ G++LW D IP
Sbjct: 218 GDENKLLMANN--------EAAVSIAWSGDARDIMWENEALTYVVPEEGSNLWFDNMVIP 269
Query: 138 AASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEE 197
+ + G HQ+I F L A E + ++P+ ++ + LPEE
Sbjct: 270 KTAD--------NIEGA----HQFINFMLDPEIA-ALNTEYVSYSTPN--QSAIELLPEE 314
Query: 198 LLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
++ + PPAE+ R E E L LS Y L
Sbjct: 315 MVGDERF--------YPPAELTERLEVYENLGREMLSLYNEL 348
>gi|328545139|ref|YP_004305248.1| ABC transporter polyamine transport protein, periplasmic protein
[Polymorphum gilvum SL003B-26A1]
gi|326414881|gb|ADZ71944.1| ABC transporter, polyamine transport protein, periplasmic protein
[Polymorphum gilvum SL003B-26A1]
Length = 362
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 74/138 (53%), Gaps = 18/138 (13%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKIS 69
AP+ W ++ ++ + I ++++P E+I + L Y+G +SN D++ AG
Sbjct: 148 APVGSWDMVFNKDIVSKFAECGIFVLDTPEEMIPAALNYLGLDPDSNETGDIEKAG---- 203
Query: 70 VQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM----SNVAV--VVP 123
+ L + R F S+ Y+ A GD+ +AVGWS D+L A R +NV V V+P
Sbjct: 204 --ELLLSIRPHIRKFHSSEYINALANGDICLAVGWSGDILQARDRAAEAGNNVTVEYVIP 261
Query: 124 KSGASLWADLWAIPAASR 141
K GA +W D AIPA +R
Sbjct: 262 KEGALMWFDNMAIPADAR 279
>gi|261253386|ref|ZP_05945959.1| putrescine ABC transporter putrescine-binding protein PotF [Vibrio
orientalis CIP 102891 = ATCC 33934]
gi|417953143|ref|ZP_12596191.1| extracellular solute-binding protein family 1 [Vibrio orientalis
CIP 102891 = ATCC 33934]
gi|260936777|gb|EEX92766.1| putrescine ABC transporter putrescine-binding protein PotF [Vibrio
orientalis CIP 102891 = ATCC 33934]
gi|342817675|gb|EGU52552.1| extracellular solute-binding protein family 1 [Vibrio orientalis
CIP 102891 = ATCC 33934]
Length = 369
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 23/141 (16%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W+ +++PE + + +N+P E++ + L Y+G NS
Sbjct: 155 APVDSWELVFKPENMEKLAQCGVGFLNAPSEIMAASLNYLGKDPNSTKTS--------DY 206
Query: 71 QQNLALLANQAR----LFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAV 120
+Q+ L Q R F S+ Y+ GD+ VA+GWS DVL A R + +A
Sbjct: 207 KQDALALLKQVRPYVTYFHSSQYINDLANGDICVAIGWSGDVLQAADRAAEADNGVEIAY 266
Query: 121 VVPKSGASLWADLWAIPAASR 141
+PK GA W DL AIP ++
Sbjct: 267 SIPKEGALAWFDLMAIPKEAK 287
>gi|354597990|ref|ZP_09016007.1| extracellular solute-binding protein family 1 [Brenneria sp.
EniD312]
gi|353675925|gb|EHD21958.1| extracellular solute-binding protein family 1 [Brenneria sp.
EniD312]
Length = 369
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P E+ +VL Y G NS+ + A S
Sbjct: 154 APLDSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYQGKDANSS----KAADYNGSA 209
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
+ L L R F S+ Y+ GD+ VA+GW+ DV+ A R NV +PK
Sbjct: 210 TELLLKLRPSIRYFHSSQYINDLANGDICVAIGWAGDVMQAANRAKEAKNGVNVHYSIPK 269
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 270 EGALAFFDVFAVPADAK 286
>gi|261404067|ref|YP_003240308.1| family 1 extracellular solute-binding protein [Paenibacillus sp.
Y412MC10]
gi|261280530|gb|ACX62501.1| extracellular solute-binding protein family 1 [Paenibacillus sp.
Y412MC10]
Length = 350
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 91/201 (45%), Gaps = 20/201 (9%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K + I W+DLW PE G++ +++ RE+IG LK G S NS+ + +
Sbjct: 139 IAYNKKYVKDE----INSWEDLWNPEYKGKVLLLDDNREMIGMALKKQGKS-NSSTDEAE 193
Query: 63 VAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVV 122
+ + L L FD+ + + + W+A WS D +VA VV
Sbjct: 194 IT----AASDELKTLLPNVLAFDTDNIKQKMIQEEGWIATVWSGDAAFIAAENPDVAYVV 249
Query: 123 PKSGASLWADLWAIPAASR---LETKQIGGRVRGP-SPLIHQWIEFCLQTARALPFKQEV 178
P+ GA++++D +AIP ++ L K I + S +++I + +A+ F E
Sbjct: 250 PEEGATIFSDNYAIPKGAKNKELAEKFINFMMEPEVSAKNYEFIGYSNPNTKAMEFHSEE 309
Query: 179 IPGASPSALETTLVKLPEELL 199
T++ L EE L
Sbjct: 310 YRA-------NTMINLTEEEL 323
>gi|418293170|ref|ZP_12905089.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
gi|379064572|gb|EHY77315.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
Length = 361
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 68/135 (50%), Gaps = 18/135 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQ 71
IE W ++ PE A + I+ ++S E+I ++L Y+G NS N D Q A +
Sbjct: 149 IESWSVIFEPENAAKLASCGIAFLDSADEMIPAMLNYLGLDPNSQNAADYQKA------E 202
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKS 125
+ L + R F S+ Y+ G++ VA G+S DV A R +A +PK
Sbjct: 203 EKLLAVRPHVRYFHSSKYISDLANGNICVAAGFSGDVFQAAARAEEAGKGIEIAYAIPKE 262
Query: 126 GASLWADLWAIPAAS 140
GA+LW D+ AIPA S
Sbjct: 263 GANLWFDMLAIPADS 277
>gi|329927991|ref|ZP_08281995.1| putative spermidine/putrescine ABC transporter [Paenibacillus sp.
HGF5]
gi|328938095|gb|EGG34492.1| putative spermidine/putrescine ABC transporter [Paenibacillus sp.
HGF5]
Length = 350
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 91/201 (45%), Gaps = 20/201 (9%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K + I W+DLW PE G++ +++ RE+IG LK G S NS+ + +
Sbjct: 139 IAYNKKYVKDE----INSWEDLWNPEYKGKVLLLDDNREMIGMALKKQGKS-NSSTDEAE 193
Query: 63 VAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVV 122
+ + L L FD+ + + + W+A WS D +VA VV
Sbjct: 194 IT----AASDELKTLLPNVLAFDTDNIKQKMIQEEGWIATVWSGDAAFIAAENPDVAYVV 249
Query: 123 PKSGASLWADLWAIPAASR---LETKQIGGRVRGP-SPLIHQWIEFCLQTARALPFKQEV 178
P+ GA++++D +AIP ++ L K I + S +++I + +A+ F E
Sbjct: 250 PEEGATIFSDNYAIPKGAKNKELAEKFINFMMEPEVSAKNYEFIGYSNPNTKAMEFHSEE 309
Query: 179 IPGASPSALETTLVKLPEELL 199
T++ L EE L
Sbjct: 310 YRA-------NTMINLTEEEL 323
>gi|126729921|ref|ZP_01745733.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Sagittula stellata E-37]
gi|126709301|gb|EBA08355.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Sagittula stellata E-37]
Length = 365
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 72/133 (54%), Gaps = 16/133 (12%)
Query: 16 APIEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W +++PE +++ +++P E++ + L Y+G +S++ D+ G +
Sbjct: 151 APLDSWDLVFKPENMEKLAECGVHFLDAPAEMLPAALNYIGEDPDSHDPDVIAKAGDV-- 208
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
A + + F S+ Y+ A G++ VAVGWS DVL A R + VA ++PK
Sbjct: 209 ---YAPIRPYIQKFHSSEYINALANGEICVAVGWSGDVLQARDRAAEADNGVEVAYIIPK 265
Query: 125 SGASLWADLWAIP 137
GA +W D+ A+P
Sbjct: 266 EGAQMWFDMMAVP 278
>gi|440288330|ref|YP_007341095.1| spermidine/putrescine-binding periplasmic protein
[Enterobacteriaceae bacterium strain FGI 57]
gi|440047852|gb|AGB78910.1| spermidine/putrescine-binding periplasmic protein
[Enterobacteriaceae bacterium strain FGI 57]
Length = 370
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W +++PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVNSWDLIFKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNVRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|418056504|ref|ZP_12694557.1| extracellular solute-binding protein family 1 [Hyphomicrobium
denitrificans 1NES1]
gi|353209723|gb|EHB75126.1| extracellular solute-binding protein family 1 [Hyphomicrobium
denitrificans 1NES1]
Length = 370
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 19/152 (12%)
Query: 3 IAYKKSKFRKHNL-APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNS 56
I Y +K ++ AP++ W +++PE+ + + M+++P +++ + L Y+G NS
Sbjct: 142 IGYNVAKVKERMADAPVDSWDLVFKPEILAKFKDCGVMMLDAPDDILPAALNYLGLDPNS 201
Query: 57 NN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM 115
N D++ AG L + + F S+ Y+ A GD+ +AVG+S D+L A R
Sbjct: 202 NKPEDIEKAGAL------LEKVRPYIQKFHSSEYINALANGDICIAVGYSGDILQARSRA 255
Query: 116 S------NVAVVVPKSGASLWADLWAIPAASR 141
+A +PK GA +W D AIPA ++
Sbjct: 256 EEAKNGQEIAYSLPKQGAQMWFDEMAIPADAK 287
>gi|238751802|ref|ZP_04613289.1| Putrescine-binding periplasmic protein [Yersinia rohdei ATCC 43380]
gi|238709931|gb|EEQ02162.1| Putrescine-binding periplasmic protein [Yersinia rohdei ATCC 43380]
Length = 369
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS +Q
Sbjct: 154 APVNSWDLVLKPENLEKLKSCGVSFLDAPSEIFATVLNYLGKDPNS----IQATDYTGPA 209
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
+ L L R F S+ Y+ GD+ VAVGW+ D+L A R NVA +PK
Sbjct: 210 TELLLKLRPNIRYFHSSQYINDLANGDICVAVGWAGDILQASNRAKEANNGVNVAYSIPK 269
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 270 EGALAFFDVFAMPADAK 286
>gi|238794852|ref|ZP_04638452.1| Putrescine-binding periplasmic protein [Yersinia intermedia ATCC
29909]
gi|238725795|gb|EEQ17349.1| Putrescine-binding periplasmic protein [Yersinia intermedia ATCC
29909]
Length = 369
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 84/189 (44%), Gaps = 22/189 (11%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS LQ
Sbjct: 154 APVNSWDLVLKPENLEKLKSCGVSFLDAPAEIFATVLNYLGKDPNS----LQATDYTGPA 209
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
+ L L R F S+ Y+ GD+ VAVGW+ D++ A R NVA +PK
Sbjct: 210 TELLLKLRPNIRYFHSSQYINDLANGDICVAVGWAGDIMQASNRAKEAKNGVNVAYSIPK 269
Query: 125 SGASLWADLWAIP--AASRLETKQIGGRVRGPSPL--IHQWIEFCLQTARALPFKQEVI- 179
GA + D++A+P A ++ E Q + P + I + + A P E +
Sbjct: 270 EGALAFFDVFAMPSDAKNQDEAYQFLNYLMRPDVIANISNHVFYANANKAATPLVNEAVR 329
Query: 180 --PGASPSA 186
PG P A
Sbjct: 330 DNPGIYPPA 338
>gi|399911594|ref|ZP_10779908.1| extracellular solute-binding protein [Halomonas sp. KM-1]
Length = 367
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 36/180 (20%)
Query: 16 APIEDWKDLWRPELAGR-------ISMVNSPREVIGSVLKYMGAS-YNSNNIDLQVAGGK 67
AP++ W L+ PE+ ISM++S E++ + Y+G S + DL+ AG
Sbjct: 151 APLDSWALLFDPEITTALRQGGCGISMLDSGDEMLSPAMAYLGLSPLSEETADLEAAGDL 210
Query: 68 IS-VQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAV 120
I+ V+ N+ F S+ Y+ GD+ VA G+S D+ A R +
Sbjct: 211 IAAVRDNITY-------FHSSRYISDLANGDICVAAGYSGDIFQAADRAEEAGRDFTIDY 263
Query: 121 VVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPL-IHQWIEFCLQTARALPFKQEVI 179
++PK GA+LW D+ AIPA + P+P H +I F L+ A + V+
Sbjct: 264 IIPKEGAALWFDMMAIPADA-------------PNPDNAHAFINFILEPEVAAAITEYVV 310
>gi|323142870|ref|ZP_08077582.1| putative putrescine-binding periplasmic protein [Succinatimonas
hippei YIT 12066]
gi|322417412|gb|EFY08034.1| putative putrescine-binding periplasmic protein [Succinatimonas
hippei YIT 12066]
Length = 377
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 28/172 (16%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
++ W L++ E + + I++++SP EVI + + Y+G NS + A ++
Sbjct: 153 VDSWDFLFKKENSDKLKQCGIAVLDSPIEVISAAMHYLGKDPNS-----EKASDYEEAEK 207
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM------SNVAVVVPKSG 126
L LA+ R F S+ Y+ G++ A+G+S D+L A KR + V PK G
Sbjct: 208 LLTALASNVRYFHSSRYINELASGEICAAIGYSGDILQADKRAIQANRDYRIKYVFPKEG 267
Query: 127 ASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEV 178
+ LW D W IPA + +G H W + L A E+
Sbjct: 268 SLLWFDCWTIPAGAE--------NYKGA----HAWFNYLLDPQVAKSVSNEI 307
>gi|422356129|ref|ZP_16436821.1| bacterial extracellular solute-binding protein [Escherichia coli MS
117-3]
gi|422763989|ref|ZP_16817742.1| extracellular solute-binding protein [Escherichia coli E1167]
gi|422775327|ref|ZP_16828983.1| bacterial extracellular solute-binding protein [Escherichia coli
H120]
gi|323947122|gb|EGB43133.1| bacterial extracellular solute-binding protein [Escherichia coli
H120]
gi|324015948|gb|EGB85167.1| bacterial extracellular solute-binding protein [Escherichia coli MS
117-3]
gi|324116167|gb|EGC10090.1| extracellular solute-binding protein [Escherichia coli E1167]
Length = 395
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 180 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 238
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ ++PK
Sbjct: 239 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFLIPK 295
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 296 EGAMAFFDVFAMPADAK 312
>gi|386814709|ref|ZP_10101927.1| extracellular solute-binding protein family 1 [Thiothrix nivea DSM
5205]
gi|386419285|gb|EIJ33120.1| extracellular solute-binding protein family 1 [Thiothrix nivea DSM
5205]
Length = 344
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 28/216 (12%)
Query: 16 APIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLA 75
A I W DLW P+ G++ + + REV LK G S NS N D A ++L
Sbjct: 142 ATITAWADLWDPKWEGKLLLTDDVREVFHMALKKNGFSTNSTNPDEIKAA-----YEDLQ 196
Query: 76 LLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWA 135
L +F++ + F GDV + + WS +V+ A + ++ + PK GA W D +A
Sbjct: 197 KLMPNVLVFNADAPREPFLAGDVNLGMIWSGEVVMAQEENPDIQYIFPKEGAGFWVDSFA 256
Query: 136 IPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLP 195
IPA + H++I+F L+ +E + ++P+ L LP
Sbjct: 257 IPAGAENVDNA------------HKFIDFMLRPEVGQKVVEE-LGYSTPNTASQDL--LP 301
Query: 196 EELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEA 231
E++ + V PP + + + EF + + +A
Sbjct: 302 EKVRNNR--------VIFPPTDAVEKGEFQKDVGDA 329
>gi|298290940|ref|YP_003692879.1| family 1 extracellular solute-binding protein [Starkeya novella DSM
506]
gi|296927451|gb|ADH88260.1| extracellular solute-binding protein family 1 [Starkeya novella DSM
506]
Length = 369
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 23/138 (16%)
Query: 17 PIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISV 70
P+ W +++PE+ G+ + M++ P E+I + L+Y+G NS + D++ AG
Sbjct: 151 PLNSWDIVFKPEILGKLKNCGVYMLDGPEEIIPTALRYLGKDPNSKDPKDIEEAG----- 205
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS-----------NVA 119
+ L + + FDS+ Y+ A GD+ +A GWS DV A R N+
Sbjct: 206 -KLLMPVRKFIKKFDSSGYINALAGGDICLATGWSGDVFQAKARAEEAAEKTGKPPINIE 264
Query: 120 VVVPKSGASLWADLWAIP 137
++PK GA +W D +AIP
Sbjct: 265 YIIPKEGALMWFDNFAIP 282
>gi|347755505|ref|YP_004863069.1| Spermidine/putrescine-binding periplasmic protein [Candidatus
Chloracidobacterium thermophilum B]
gi|347588023|gb|AEP12553.1| Spermidine/putrescine-binding periplasmic protein [Candidatus
Chloracidobacterium thermophilum B]
Length = 614
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 102/243 (41%), Gaps = 41/243 (16%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDL 61
I Y++ K + P+E W LW GRI+M++ RE + L+ GAS NS + ++
Sbjct: 404 IGYRRDKVPE----PVEHWDALWDTRYRGRIAMLDDQRECFAAALRRRGASPNSQDEQEI 459
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
A ++ Q+ L + +DS + + G+ W+ G++ + A ++ N+A V
Sbjct: 460 ARAADDLAAQKPL------VKTYDSATFEQLLLNGEAWLVHGFNGQIAKAARQNPNIAFV 513
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSP-LIHQWIEFCLQTARALPFKQEVIP 180
VP+ G + D AIP V P L Q+I++ L+ P
Sbjct: 514 VPQEGGTRAVDCLAIP-------------VNAAHPELAEQFIDYVLE------------P 548
Query: 181 GASPSALETTLVKLPEELLKG--KPSQDTNLIVGVPPAEILARCEFLEPLSEAT-LSDYE 237
AS ++ T P ++ P N V PP L RC +E + DY
Sbjct: 549 QASAEIVQVTGYGTPNRAVRDFLPPDWANNPYV-FPPETWLRRCAVIEDVGAILPRYDYY 607
Query: 238 WLV 240
W V
Sbjct: 608 WTV 610
>gi|387889855|ref|YP_006320153.1| putrescine-binding periplasmic protein [Escherichia blattae DSM
4481]
gi|414592478|ref|ZP_11442128.1| putrescine ABC transporter substrate-binding periplasmic protein
[Escherichia blattae NBRC 105725]
gi|386924688|gb|AFJ47642.1| putrescine-binding periplasmic protein precursor [Escherichia
blattae DSM 4481]
gi|403196547|dbj|GAB79780.1| putrescine ABC transporter substrate-binding periplasmic protein
[Escherichia blattae NBRC 105725]
Length = 369
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 16/137 (11%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W +++PE + ++ +++P E+ +VL Y+G NS+N A +
Sbjct: 155 APVNSWDLIFKPENIAKLKSCGVAFLDAPSEMYATVLHYLGKDPNSSN-----AADYNAA 209
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GDV VA+GWS DVL A R S ++A +PK
Sbjct: 210 TDLLLKLRPSVRYFHSSQYINDLANGDVCVAIGWSGDVLQAANRASEAKNGVHIAYSIPK 269
Query: 125 SGASLWADLWAIPAASR 141
GA + D +AI A ++
Sbjct: 270 EGAIGYFDNFAITADAK 286
>gi|448747704|ref|ZP_21729359.1| Bacterial periplasmic spermidine/putrescine-binding protein
[Halomonas titanicae BH1]
gi|445564647|gb|ELY20764.1| Bacterial periplasmic spermidine/putrescine-binding protein
[Halomonas titanicae BH1]
Length = 369
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 18/136 (13%)
Query: 16 APIEDWKDLWRPELAGRIS-------MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKI 68
AP++ W L+ PE+ +S M++S E++ + Y+G S N+D A G++
Sbjct: 153 APVDSWALLFDPEITSALSEAGCGLSMLDSADEMLSPAMAYLGFDPLSENLDDIEAAGEL 212
Query: 69 SVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVV 122
+A + + F S+ Y+ GD+ VA G+S D+ A R +A +
Sbjct: 213 -----IAEVRDDMTYFHSSRYVSDLANGDICVAAGYSGDIFQAADRAEEAGRDFTIAYSI 267
Query: 123 PKSGASLWADLWAIPA 138
PK GA+LW D+ A+PA
Sbjct: 268 PKEGAALWFDMMAVPA 283
>gi|397167724|ref|ZP_10491164.1| putrescine-binding periplasmic protein [Enterobacter radicincitans
DSM 16656]
gi|396090542|gb|EJI88112.1| putrescine-binding periplasmic protein [Enterobacter radicincitans
DSM 16656]
Length = 370
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 73/157 (46%), Gaps = 17/157 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NSN D G +
Sbjct: 155 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSNKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVTYTIPK 270
Query: 125 SGASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH 159
GA + D++A+P A ++ E Q + P + H
Sbjct: 271 EGALAFFDVFAMPADAKNKDEAYQFLNYLMRPDVIAH 307
>gi|426409667|ref|YP_007029766.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. UW4]
gi|426267884|gb|AFY19961.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. UW4]
Length = 362
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 64/133 (48%), Gaps = 18/133 (13%)
Query: 18 IEDWKDLWRPE-----LAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W L+ PE A +SM++S EV +VL YMG S N D + A K
Sbjct: 150 IDSWAVLFEPENIKKLSACGVSMMDSADEVFPAVLNYMGMDPRSENPEDFKKAEAK---- 205
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
L + F S+ Y+ GD+ VA G+S DV A R N+A +PK
Sbjct: 206 --LLQIRPYITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEANNGVNIAYAIPKE 263
Query: 126 GASLWADLWAIPA 138
GA+LW DL AIPA
Sbjct: 264 GANLWFDLLAIPA 276
>gi|428318683|ref|YP_007116565.1| extracellular solute-binding protein family 1 [Oscillatoria
nigro-viridis PCC 7112]
gi|428242363|gb|AFZ08149.1| extracellular solute-binding protein family 1 [Oscillatoria
nigro-viridis PCC 7112]
Length = 376
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 73/152 (48%), Gaps = 21/152 (13%)
Query: 19 EDWKDLW--RPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLAL 76
EDW LW + ELA R+++ N REV+G+ L+ +G S NS N + QV + L
Sbjct: 176 EDWDYLWQHKQELAKRMTLANDVREVMGAALRMLGYSLNSTNQE-QVK----QAYEKLVE 230
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
L F + + GD+ VA+ +SSD + + VVPKSG+SLW D I
Sbjct: 231 LKPAIASFTTDAWRPQMLTGDLKVAMCYSSDANEVIPDNDKLRYVVPKSGSSLWTDTLVI 290
Query: 137 PAASRLETKQIGGRVRGPSP-LIHQWIEFCLQ 167
P + P+P ++WI F LQ
Sbjct: 291 PKGA-------------PNPEAAYKWINFMLQ 309
>gi|257877440|ref|ZP_05657093.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC20]
gi|257811606|gb|EEV40426.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC20]
Length = 357
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 111/245 (45%), Gaps = 37/245 (15%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID-L 61
I Y F + I W DLW+PELA I +++ REV+G L +G S NS + D L
Sbjct: 143 IVYNDKFFDE---GVITQWDDLWKPELANSIMLIDGAREVMGLGLDSLGYSLNSKDDDQL 199
Query: 62 QVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVA 119
Q A K+ ++ N+ A++A++ +++ + + VAV +S + + ++
Sbjct: 200 QEAFNKLRTMTPNIKAIVADEIKMYMANE--------EASVAVTFSGEAADMMYENEHIH 251
Query: 120 VVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVI 179
V+P G++LW D IP S+ E+ + ++ F L+ A E I
Sbjct: 252 YVIPSEGSNLWFDNMVIPKTSQNESGA------------YAFLNFMLEPENAAQ-NAEYI 298
Query: 180 PGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
++P+ + + LP+E+ ++D P E++ E E L L Y L
Sbjct: 299 GYSTPN--QAAMALLPDEI-----TEDEQF---YPSDELMEHLEVYENLGAEYLGIYNDL 348
Query: 240 VADLQ 244
+L+
Sbjct: 349 FLELK 353
>gi|432830829|ref|ZP_20064412.1| putrescine-binding periplasmic protein [Escherichia coli KTE135]
gi|431379670|gb|ELG64599.1| putrescine-binding periplasmic protein [Escherichia coli KTE135]
Length = 370
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ ++PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFLIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|432464817|ref|ZP_19706923.1| putrescine-binding periplasmic protein [Escherichia coli KTE205]
gi|432582913|ref|ZP_19819323.1| putrescine-binding periplasmic protein [Escherichia coli KTE57]
gi|433071904|ref|ZP_20258598.1| putrescine-binding periplasmic protein [Escherichia coli KTE129]
gi|433119402|ref|ZP_20305109.1| putrescine-binding periplasmic protein [Escherichia coli KTE157]
gi|433182391|ref|ZP_20366686.1| putrescine-binding periplasmic protein [Escherichia coli KTE85]
gi|430996623|gb|ELD12899.1| putrescine-binding periplasmic protein [Escherichia coli KTE205]
gi|431119929|gb|ELE22928.1| putrescine-binding periplasmic protein [Escherichia coli KTE57]
gi|431592074|gb|ELI62980.1| putrescine-binding periplasmic protein [Escherichia coli KTE129]
gi|431648264|gb|ELJ15663.1| putrescine-binding periplasmic protein [Escherichia coli KTE157]
gi|431711030|gb|ELJ75392.1| putrescine-binding periplasmic protein [Escherichia coli KTE85]
Length = 370
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA ++ D++A+PA ++
Sbjct: 271 EGAMVFFDVFAMPADAK 287
>gi|209918103|ref|YP_002292187.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli SE11]
gi|417144631|ref|ZP_11986437.1| putrescine-binding periplasmic protein [Escherichia coli 1.2264]
gi|417152559|ref|ZP_11991350.1| putrescine-binding periplasmic protein [Escherichia coli 96.0497]
gi|417580120|ref|ZP_12230937.1| putrescine-binding periplasmic protein [Escherichia coli STEC_B2F1]
gi|433091183|ref|ZP_20277478.1| putrescine-binding periplasmic protein [Escherichia coli KTE138]
gi|209911362|dbj|BAG76436.1| putrescine ABC transporter substrate binding component [Escherichia
coli SE11]
gi|345342465|gb|EGW74859.1| putrescine-binding periplasmic protein [Escherichia coli STEC_B2F1]
gi|386164514|gb|EIH26300.1| putrescine-binding periplasmic protein [Escherichia coli 1.2264]
gi|386169283|gb|EIH35791.1| putrescine-binding periplasmic protein [Escherichia coli 96.0497]
gi|431613376|gb|ELI82573.1| putrescine-binding periplasmic protein [Escherichia coli KTE138]
Length = 370
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ ++PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFLIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|114705308|ref|ZP_01438216.1| putrescine-binding periplasmic protein [Fulvimarina pelagi
HTCC2506]
gi|114540093|gb|EAU43213.1| putrescine-binding periplasmic protein [Fulvimarina pelagi
HTCC2506]
Length = 365
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 71/145 (48%), Gaps = 18/145 (12%)
Query: 6 KKSKFRKHNLAPIEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNN-I 59
K K R P+ + L+ PEL +++ M+N+ EV+ + L Y+G NS N
Sbjct: 141 KMVKERLGEDQPLNTYDLLFDPELVSKLADCGVYMLNTSEEVVPAALNYLGLDPNSTNPD 200
Query: 60 DLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS--- 116
DLQ A + L + R F+S+ Y+ A GD+ +A GWS D+L + R
Sbjct: 201 DLQKA------EDLLLQVKPHIRKFNSSEYITALANGDICMAHGWSGDILQSRDRAKEAG 254
Query: 117 ---NVAVVVPKSGASLWADLWAIPA 138
+ V+PK GA +W D AIPA
Sbjct: 255 QGVEIQYVIPKEGAVIWVDNMAIPA 279
>gi|123441805|ref|YP_001005789.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|420259064|ref|ZP_14761782.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|122088766|emb|CAL11571.1| putrescine-binding periplasmic protein precursor [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|404513431|gb|EKA27248.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 369
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS +Q
Sbjct: 154 APVNSWDLVLKPENLEKLKSCGVSFLDAPSEIFATVLNYLGKDPNS----IQATDYTGPA 209
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
+ L L R F S+ Y+ GD+ VAVGW+ D++ A R NVA +PK
Sbjct: 210 TELLLKLRPNIRYFHSSQYINDLANGDICVAVGWAGDIMQASNRAKEAKNGVNVAYSIPK 269
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 270 EGALAFFDVFAMPADAK 286
>gi|332162254|ref|YP_004298831.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|386307807|ref|YP_006003863.1| putrescine ABC transporter putrescine-binding protein PotF
[Yersinia enterocolitica subsp. palearctica Y11]
gi|418242130|ref|ZP_12868647.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|433548238|ref|ZP_20504288.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Yersinia enterocolitica IP 10393]
gi|318606319|emb|CBY27817.1| putrescine ABC transporter putrescine-binding protein PotF
[Yersinia enterocolitica subsp. palearctica Y11]
gi|325666484|gb|ADZ43128.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330860389|emb|CBX70699.1| putrescine-binding periplasmic protein [Yersinia enterocolitica
W22703]
gi|351778478|gb|EHB20631.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|431790798|emb|CCO67328.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Yersinia enterocolitica IP 10393]
Length = 369
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS +Q
Sbjct: 154 APVNSWDLVLKPENLEKLKSCGVSFLDAPSEIFATVLNYLGKDPNS----IQATDYTGPA 209
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
+ L L R F S+ Y+ GD+ VAVGW+ D++ A R NVA +PK
Sbjct: 210 TELLLKLRPNIRYFHSSQYINDLANGDICVAVGWAGDIMQASNRAKEAKNGVNVAYSIPK 269
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 270 EGALAFFDVFAMPADAK 286
>gi|238762095|ref|ZP_04623068.1| Putrescine-binding periplasmic protein [Yersinia kristensenii ATCC
33638]
gi|238699823|gb|EEP92567.1| Putrescine-binding periplasmic protein [Yersinia kristensenii ATCC
33638]
Length = 369
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS +Q
Sbjct: 154 APVNSWDLVLKPENLEKLKSCGVSFLDAPSEIFATVLNYLGKDPNS----IQATDYTGPA 209
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
+ L L R F S+ Y+ GD+ VAVGW+ D++ A R NVA +PK
Sbjct: 210 TELLLKLRPNIRYFHSSQYINDLANGDICVAVGWAGDIMQASNRAKEAKNGVNVAYSIPK 269
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 270 EGALAFFDVFAMPADAK 286
>gi|325568827|ref|ZP_08145120.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus casseliflavus
ATCC 12755]
gi|420263774|ref|ZP_14766410.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus sp. C1]
gi|325157865|gb|EGC70021.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus casseliflavus
ATCC 12755]
gi|394769216|gb|EJF49079.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus sp. C1]
Length = 357
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 110/245 (44%), Gaps = 37/245 (15%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID-L 61
I Y F + I W DLW+PELA I +++ REV+G L +G S NS + D L
Sbjct: 143 IVYNDKFFDE---GEITQWDDLWKPELANSIMLIDGAREVMGLGLDSLGYSLNSKDDDQL 199
Query: 62 QVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVA 119
Q A K+ ++ N+ A++A++ +++ + + VAV +S + + ++
Sbjct: 200 QEAFNKLRTMTPNIKAIVADEIKMYMANE--------EASVAVTFSGEAADMMYENEHIH 251
Query: 120 VVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVI 179
V+P G++LW D IP S+ E + ++ F L+ A E I
Sbjct: 252 YVIPSEGSNLWFDNMVIPKTSQNEAGA------------YAFLNFMLEPENAAQ-NAEYI 298
Query: 180 PGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
++P+ + + LP+E+ ++D P E++ E E L L Y L
Sbjct: 299 GYSTPN--QEAMALLPDEI-----TEDEQF---YPSDELMEHLEVYENLGAEYLGIYNDL 348
Query: 240 VADLQ 244
+L+
Sbjct: 349 FLELK 353
>gi|257867366|ref|ZP_05647019.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC30]
gi|257873697|ref|ZP_05653350.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC10]
gi|257801422|gb|EEV30352.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC30]
gi|257807861|gb|EEV36683.1| extracellular solute-binding protein [Enterococcus casseliflavus
EC10]
Length = 357
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 110/245 (44%), Gaps = 37/245 (15%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID-L 61
I Y F + I W DLW+PELA I +++ REV+G L +G S NS + D L
Sbjct: 143 IVYNDKFFDE---GEITQWDDLWKPELANSIMLIDGAREVMGLGLDSLGYSLNSKDDDQL 199
Query: 62 QVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVA 119
Q A K+ ++ N+ A++A++ +++ + + VAV +S + + ++
Sbjct: 200 QEAFNKLRTMTPNIKAIVADEIKMYMANE--------EASVAVTFSGEAADMMYENEHIH 251
Query: 120 VVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVI 179
V+P G++LW D IP S+ E + ++ F L+ A E I
Sbjct: 252 YVIPSEGSNLWFDNMVIPKTSQNEAGA------------YAFLNFMLEPENAAQ-NAEYI 298
Query: 180 PGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
++P+ + + LP+E+ ++D P E++ E E L L Y L
Sbjct: 299 GYSTPN--QAAMALLPDEI-----TEDEQF---YPSDELMEHLEVYENLGAEYLGIYNDL 348
Query: 240 VADLQ 244
+L+
Sbjct: 349 FLELK 353
>gi|260432277|ref|ZP_05786248.1| putrescine-binding periplasmic protein [Silicibacter
lacuscaerulensis ITI-1157]
gi|260416105|gb|EEX09364.1| putrescine-binding periplasmic protein [Silicibacter
lacuscaerulensis ITI-1157]
Length = 361
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 34/166 (20%)
Query: 16 APIEDWKDLWRPE----LAG-RISMVNSPREVIGSVLKYMGASYNSNNIDL--QVAGGKI 68
API+ W ++ PE LAG + +++P E+I + LKY+G +S++ D+ + G +
Sbjct: 147 APIDSWDLVFNPENMEKLAGCGVHFLDAPAEMIPAALKYIGEDPDSHDPDVIAKAEGVFM 206
Query: 69 SVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVV 122
+V+ + + F S+ Y+ A GD+ VAVGWS DVL A R +A
Sbjct: 207 AVRPYI-------QKFHSSEYINALANGDICVAVGWSGDVLQARDRADEADNGVTIAYHA 259
Query: 123 PKSGASLWADLWAIPAASRLETKQIGGRVRGPSPL-IHQWIEFCLQ 167
PK GA +W D AIP V P+P H+++ F +
Sbjct: 260 PKEGAQMWFDQMAIP-------------VDAPNPDGAHKFLNFIMD 292
>gi|93006986|ref|YP_581423.1| extracellular solute-binding protein [Psychrobacter cryohalolentis
K5]
gi|92394664|gb|ABE75939.1| extracellular solute-binding protein, family 1 [Psychrobacter
cryohalolentis K5]
Length = 374
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 100/223 (44%), Gaps = 29/223 (13%)
Query: 16 APIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLA 75
A + W DLWRPE G++ ++N REV G L +G S NS N D A + L
Sbjct: 170 ATVNSWNDLWRPEYKGQVMLMNDMREVFGMALLTLGYSGNSRNPDEIKAA-----YEKLT 224
Query: 76 LLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR-MSNVAVVVPKSGASLWADLW 134
L + F+S + G+ V + W+ + + A ++++ P GA LW D +
Sbjct: 225 TLMPNVKTFNSDASRMPYMEGETSVGMTWNGEAIIANSEGLTSLVYKYPTEGAILWMDNF 284
Query: 135 AIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKL 194
IP + Q+ H++I++ L+ + +E I ASP+ + +
Sbjct: 285 VIPKNAT----QVDA--------AHKFIDYLLRPENSKIVSEE-IGYASPNIAAREM--M 329
Query: 195 PEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
P++ +K P+ P ++LA+ EF E + + L Y+
Sbjct: 330 PDD-VKNNPTI-------YPSKDVLAKAEFQEDVGDEALQVYQ 364
>gi|91209888|ref|YP_539874.1| putrescine ABC transporter substrate-binding protein [Escherichia
coli UTI89]
gi|117623034|ref|YP_851947.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli APEC O1]
gi|237707182|ref|ZP_04537663.1| putrescine-binding periplasmic protein [Escherichia sp. 3_2_53FAA]
gi|300991852|ref|ZP_07179677.1| bacterial extracellular solute-binding protein [Escherichia coli MS
200-1]
gi|331646122|ref|ZP_08347225.1| putrescine-binding periplasmic protein [Escherichia coli M605]
gi|422358904|ref|ZP_16439553.1| bacterial extracellular solute-binding protein [Escherichia coli MS
110-3]
gi|422368868|ref|ZP_16449272.1| bacterial extracellular solute-binding protein [Escherichia coli MS
16-3]
gi|422375650|ref|ZP_16455913.1| bacterial extracellular solute-binding protein [Escherichia coli MS
60-1]
gi|422378970|ref|ZP_16459173.1| bacterial extracellular solute-binding protein [Escherichia coli MS
57-2]
gi|91071462|gb|ABE06343.1| putrescine-binding periplasmic protein precursor [Escherichia coli
UTI89]
gi|115512158|gb|ABJ00233.1| putrescine-binding periplasmic protein precursor [Escherichia coli
APEC O1]
gi|226898392|gb|EEH84651.1| putrescine-binding periplasmic protein [Escherichia sp. 3_2_53FAA]
gi|300305462|gb|EFJ59982.1| bacterial extracellular solute-binding protein [Escherichia coli MS
200-1]
gi|315287314|gb|EFU46725.1| bacterial extracellular solute-binding protein [Escherichia coli MS
110-3]
gi|315299397|gb|EFU58649.1| bacterial extracellular solute-binding protein [Escherichia coli MS
16-3]
gi|324009780|gb|EGB78999.1| bacterial extracellular solute-binding protein [Escherichia coli MS
57-2]
gi|324013016|gb|EGB82235.1| bacterial extracellular solute-binding protein [Escherichia coli MS
60-1]
gi|331044874|gb|EGI17001.1| putrescine-binding periplasmic protein [Escherichia coli M605]
Length = 418
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 203 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 261
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 262 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 318
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 319 EGAMAFFDVFAMPADAK 335
>gi|26246877|ref|NP_752917.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli CFT073]
gi|227884182|ref|ZP_04001987.1| putrescine ABC superfamily ATP binding cassette transporter
periplasmic substrate-binding protein [Escherichia coli
83972]
gi|300993458|ref|ZP_07180400.1| bacterial extracellular solute-binding protein [Escherichia coli MS
45-1]
gi|301051218|ref|ZP_07198047.1| bacterial extracellular solute-binding protein [Escherichia coli MS
185-1]
gi|386628394|ref|YP_006148114.1| putrescine transporter subunit [Escherichia coli str. 'clone D i2']
gi|386633314|ref|YP_006153033.1| putrescine transporter subunit [Escherichia coli str. 'clone D
i14']
gi|422364764|ref|ZP_16445275.1| bacterial extracellular solute-binding protein [Escherichia coli MS
153-1]
gi|26107277|gb|AAN79460.1|AE016758_64 Putrescine-binding periplasmic protein precursor [Escherichia coli
CFT073]
gi|227838934|gb|EEJ49400.1| putrescine ABC superfamily ATP binding cassette transporter
periplasmic substrate-binding protein [Escherichia coli
83972]
gi|300297125|gb|EFJ53510.1| bacterial extracellular solute-binding protein [Escherichia coli MS
185-1]
gi|300406572|gb|EFJ90110.1| bacterial extracellular solute-binding protein [Escherichia coli MS
45-1]
gi|315292529|gb|EFU51881.1| bacterial extracellular solute-binding protein [Escherichia coli MS
153-1]
gi|355419293|gb|AER83490.1| putrescine transporter subunit [Escherichia coli str. 'clone D i2']
gi|355424213|gb|AER88409.1| putrescine transporter subunit [Escherichia coli str. 'clone D
i14']
Length = 418
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 203 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 261
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 262 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 318
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 319 EGAMAFFDVFAMPADAK 335
>gi|293396880|ref|ZP_06641154.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Serratia odorifera DSM 4582]
gi|291420351|gb|EFE93606.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Serratia odorifera DSM 4582]
Length = 369
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 17/138 (12%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P E+ +VL Y+G NS++ A
Sbjct: 154 APVDSWDLVLKPENLEKLKSCGVSFLDAPSEIFATVLNYLGKDPNSSD-----AKDYTGP 208
Query: 71 QQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVP 123
+L L L R F S+ Y+ GD+ VA+GW+ DV+ A R NVA +P
Sbjct: 209 ATDLLLKLRPSVRYFHSSQYINDLANGDICVAIGWAGDVMQASNRAKDAKNGVNVAYSIP 268
Query: 124 KSGASLWADLWAIPAASR 141
K GA + D++A+PA ++
Sbjct: 269 KEGALAFFDVFAMPADAK 286
>gi|149377228|ref|ZP_01894976.1| extracellular solute-binding protein, family 1 [Marinobacter
algicola DG893]
gi|149358527|gb|EDM47001.1| extracellular solute-binding protein, family 1 [Marinobacter
algicola DG893]
Length = 368
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 22/140 (15%)
Query: 16 APIEDWKDLWRPELAGRIS-------MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKI 68
AP + W ++ PE+ G++S M++S E++ + + Y+G + NSNN + GG++
Sbjct: 152 APTDSWALVFDPEVTGKLSAGGCGIAMLDSGEEMVRAAMAYIGLNPNSNNAEDIKKGGEV 211
Query: 69 --SVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAV 120
+ + N+ F S+ Y+ GD+ VA G+S D+L A R +
Sbjct: 212 IKATRPNITY-------FHSSRYIADLANGDLCVAAGYSGDILQAAARAEEAGNGNVIRY 264
Query: 121 VVPKSGASLWADLWAIPAAS 140
+PK GA LW D+ IPA +
Sbjct: 265 TIPKEGAVLWFDMMTIPAGA 284
>gi|419395467|ref|ZP_13936249.1| potF [Escherichia coli DEC15B]
gi|378250079|gb|EHY09987.1| potF [Escherichia coli DEC15B]
Length = 325
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 110 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 168
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 169 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 225
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 226 EGAMAFFDVFAMPADAK 242
>gi|419305443|ref|ZP_13847353.1| putrescine-binding periplasmic protein [Escherichia coli DEC11D]
gi|378151922|gb|EHX13024.1| putrescine-binding periplasmic protein [Escherichia coli DEC11D]
Length = 325
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 110 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 168
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 169 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 225
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 226 EGAMAFFDVFAMPADAK 242
>gi|420330059|ref|ZP_14831756.1| putrescine-binding periplasmic domain protein [Shigella flexneri
K-1770]
gi|391258105|gb|EIQ17211.1| putrescine-binding periplasmic domain protein [Shigella flexneri
K-1770]
Length = 289
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 74 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 132
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 133 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 189
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 190 EGAMAFFDVFAMPADAK 206
>gi|398952723|ref|ZP_10674961.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM33]
gi|398154781|gb|EJM43245.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM33]
Length = 362
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 64/133 (48%), Gaps = 18/133 (13%)
Query: 18 IEDWKDLWRPE-----LAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W L+ PE A +SM++S EV ++L YMG S N D + A K
Sbjct: 150 IDSWAVLFEPENIKKLSACGVSMMDSADEVFPAILNYMGMDPRSENPEDFKKAEAK---- 205
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
L + F S+ Y+ GD+ VA G+S DV A R N+A +PK
Sbjct: 206 --LLQIRPYITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEANNGVNIAYAIPKE 263
Query: 126 GASLWADLWAIPA 138
GA+LW DL AIPA
Sbjct: 264 GANLWFDLLAIPA 276
>gi|432552849|ref|ZP_19789579.1| putrescine-binding periplasmic protein [Escherichia coli KTE47]
gi|431086421|gb|ELD92444.1| putrescine-binding periplasmic protein [Escherichia coli KTE47]
Length = 325
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 110 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 168
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 169 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 225
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 226 EGAMAFFDVFAMPADAK 242
>gi|398895172|ref|ZP_10647050.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
gi|398181368|gb|EJM68937.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
Length = 362
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 64/133 (48%), Gaps = 18/133 (13%)
Query: 18 IEDWKDLWRPE-----LAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W L+ PE A +SM++S EV ++L YMG S N D + A K
Sbjct: 150 IDSWAVLFEPENIKKLSACGVSMMDSADEVFPAILNYMGMDPRSENPEDFKKAEAK---- 205
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
L + F S+ Y+ GD+ VA G+S DV A R N+A +PK
Sbjct: 206 --LLQIRPYITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEANNGVNIAYAIPKE 263
Query: 126 GASLWADLWAIPA 138
GA+LW DL AIPA
Sbjct: 264 GANLWFDLLAIPA 276
>gi|386826294|ref|ZP_10113401.1| spermidine/putrescine-binding periplasmic protein [Beggiatoa alba
B18LD]
gi|386427178|gb|EIJ41006.1| spermidine/putrescine-binding periplasmic protein [Beggiatoa alba
B18LD]
Length = 369
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W +++PE ++S +++P EV VL Y+G S N D KI V
Sbjct: 154 APVDSWDLVFKPENLEKLSKCGVYFLDTPTEVFPIVLNYLGKEPLSENSDDYT---KI-V 209
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPK 124
Q + L F S+ Y+ A GD+ VAVGWS DVL A R + V VPK
Sbjct: 210 QPFMLKLRPFITNFHSSEYINALANGDICVAVGWSGDVLQAADRAAEANKGVKVEYSVPK 269
Query: 125 SGASLWADLWAIPAASR 141
G +W D+ AIP ++
Sbjct: 270 EGTIMWVDMMAIPKDAK 286
>gi|188496410|ref|ZP_03003680.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli 53638]
gi|188491609|gb|EDU66712.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli 53638]
Length = 420
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 205 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 263
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 264 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 320
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 321 EGAMAFFDVFAMPADAK 337
>gi|3891734|pdb|1A99|A Chain A, Putrescine Receptor (Potf) From E. Coli
gi|3891735|pdb|1A99|B Chain B, Putrescine Receptor (Potf) From E. Coli
gi|3891736|pdb|1A99|C Chain C, Putrescine Receptor (Potf) From E. Coli
gi|3891737|pdb|1A99|D Chain D, Putrescine Receptor (Potf) From E. Coli
Length = 344
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 129 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 187
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 188 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 244
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 245 EGAMAFFDVFAMPADAK 261
>gi|300947056|ref|ZP_07161277.1| bacterial extracellular solute-binding protein [Escherichia coli MS
116-1]
gi|300957057|ref|ZP_07169303.1| bacterial extracellular solute-binding protein [Escherichia coli MS
175-1]
gi|422770088|ref|ZP_16823779.1| extracellular solute-binding protein [Escherichia coli E482]
gi|300316197|gb|EFJ65981.1| bacterial extracellular solute-binding protein [Escherichia coli MS
175-1]
gi|300453295|gb|EFK16915.1| bacterial extracellular solute-binding protein [Escherichia coli MS
116-1]
gi|323942771|gb|EGB38936.1| extracellular solute-binding protein [Escherichia coli E482]
Length = 415
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 200 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 258
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 259 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 315
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 316 EGAMAFFDVFAMPADAK 332
>gi|398921988|ref|ZP_10660067.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
gi|398163704|gb|EJM51855.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
Length = 362
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 64/133 (48%), Gaps = 18/133 (13%)
Query: 18 IEDWKDLWRPE-----LAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W L+ PE A +SM++S EV S+L YMG S N D + A +
Sbjct: 150 IDSWAVLFEPENIKKLSACGVSMMDSADEVFPSILNYMGMDPRSENPEDFKKAEAR---- 205
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
L + F S+ Y+ GD+ VA G+S DV A R N+A +PK
Sbjct: 206 --LLAIRPYITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKE 263
Query: 126 GASLWADLWAIPA 138
GA+LW DL A+PA
Sbjct: 264 GANLWFDLLAVPA 276
>gi|386704035|ref|YP_006167882.1| putrescine ABC transporter periplasmic-binding protein, partial
[Escherichia coli P12b]
gi|383102203|gb|AFG39712.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli P12b]
Length = 298
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 83 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 141
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 142 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 198
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 199 EGAMAFFDVFAMPADAK 215
>gi|331651869|ref|ZP_08352888.1| putrescine-binding periplasmic protein [Escherichia coli M718]
gi|331050147|gb|EGI22205.1| putrescine-binding periplasmic protein [Escherichia coli M718]
Length = 395
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 180 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 238
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 239 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 295
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 296 EGAMAFFDVFAMPADAK 312
>gi|422800217|ref|ZP_16848715.1| extracellular solute-binding protein [Escherichia coli M863]
gi|323967289|gb|EGB62712.1| extracellular solute-binding protein [Escherichia coli M863]
Length = 395
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 180 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 238
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 239 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 295
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 296 EGAMAFFDVFAMPADAK 312
>gi|419146898|ref|ZP_13691589.1| potF [Escherichia coli DEC6B]
gi|378000417|gb|EHV63488.1| potF [Escherichia coli DEC6B]
Length = 353
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 138 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 196
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 197 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 253
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 254 EGAMAFFDVFAMPADAK 270
>gi|418945897|ref|ZP_13498573.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily, partial [Escherichia coli O157:H43 str.
T22]
gi|375318787|gb|EHS65157.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily, partial [Escherichia coli O157:H43 str.
T22]
Length = 288
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 73 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 131
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 132 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 188
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 189 EGAMAFFDVFAMPADAK 205
>gi|300817047|ref|ZP_07097266.1| bacterial extracellular solute-binding protein [Escherichia coli MS
107-1]
gi|332282252|ref|ZP_08394665.1| putrescine-binding periplasmic protein [Shigella sp. D9]
gi|415880496|ref|ZP_11545169.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli MS 79-10]
gi|300530399|gb|EFK51461.1| bacterial extracellular solute-binding protein [Escherichia coli MS
107-1]
gi|332104604|gb|EGJ07950.1| putrescine-binding periplasmic protein [Shigella sp. D9]
gi|342926405|gb|EGU95127.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli MS 79-10]
Length = 395
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 180 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 238
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 239 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 295
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 296 EGAMAFFDVFAMPADAK 312
>gi|429114895|ref|ZP_19175813.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter sakazakii 701]
gi|426318024|emb|CCK01926.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter sakazakii 701]
Length = 370
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 17/157 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS+ D +G +
Sbjct: 155 APLNSWDLVLKPENLKKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYSGAATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R N++ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNISYTIPK 270
Query: 125 SGASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH 159
GA + D++A+P A ++ E Q + P + H
Sbjct: 271 EGALAFFDVFAMPADAKNKDEAYQFLNYLMRPDVMAH 307
>gi|300924463|ref|ZP_07140433.1| bacterial extracellular solute-binding protein [Escherichia coli MS
182-1]
gi|301325862|ref|ZP_07219295.1| bacterial extracellular solute-binding protein [Escherichia coli MS
78-1]
gi|300419348|gb|EFK02659.1| bacterial extracellular solute-binding protein [Escherichia coli MS
182-1]
gi|300847376|gb|EFK75136.1| bacterial extracellular solute-binding protein [Escherichia coli MS
78-1]
Length = 395
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 180 APVDSWNLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 238
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 239 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 295
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 296 EGAMAFFDVFAMPADAK 312
>gi|301020628|ref|ZP_07184703.1| bacterial extracellular solute-binding protein [Escherichia coli MS
69-1]
gi|300398604|gb|EFJ82142.1| bacterial extracellular solute-binding protein [Escherichia coli MS
69-1]
Length = 395
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 180 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 238
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 239 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 295
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 296 EGAMAFFDVFAMPADAK 312
>gi|300823995|ref|ZP_07104117.1| bacterial extracellular solute-binding protein [Escherichia coli MS
119-7]
gi|300921116|ref|ZP_07137500.1| bacterial extracellular solute-binding protein [Escherichia coli MS
115-1]
gi|301646291|ref|ZP_07246182.1| bacterial extracellular solute-binding protein [Escherichia coli MS
146-1]
gi|331641375|ref|ZP_08342510.1| putrescine-binding periplasmic protein [Escherichia coli H736]
gi|331676642|ref|ZP_08377338.1| putrescine-binding periplasmic protein [Escherichia coli H591]
gi|422793872|ref|ZP_16846565.1| extracellular solute-binding protein [Escherichia coli TA007]
gi|300411967|gb|EFJ95277.1| bacterial extracellular solute-binding protein [Escherichia coli MS
115-1]
gi|300523506|gb|EFK44575.1| bacterial extracellular solute-binding protein [Escherichia coli MS
119-7]
gi|301075494|gb|EFK90300.1| bacterial extracellular solute-binding protein [Escherichia coli MS
146-1]
gi|323969582|gb|EGB64870.1| extracellular solute-binding protein [Escherichia coli TA007]
gi|331038173|gb|EGI10393.1| putrescine-binding periplasmic protein [Escherichia coli H736]
gi|331075331|gb|EGI46629.1| putrescine-binding periplasmic protein [Escherichia coli H591]
Length = 395
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 180 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 238
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 239 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 295
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 296 EGAMAFFDVFAMPADAK 312
>gi|420390323|ref|ZP_14889591.1| potF [Escherichia coli EPEC C342-62]
gi|391314647|gb|EIQ72197.1| potF [Escherichia coli EPEC C342-62]
Length = 353
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 138 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 196
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 197 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 253
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 254 EGAMAFFDVFAMPADAK 270
>gi|422782310|ref|ZP_16835095.1| extracellular solute-binding protein [Escherichia coli TW10509]
gi|323976761|gb|EGB71849.1| extracellular solute-binding protein [Escherichia coli TW10509]
Length = 395
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 180 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 238
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 239 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 295
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 296 EGAMAFFDVFAMPADAK 312
>gi|309795351|ref|ZP_07689769.1| bacterial extracellular solute-binding protein [Escherichia coli MS
145-7]
gi|308121001|gb|EFO58263.1| bacterial extracellular solute-binding protein [Escherichia coli MS
145-7]
Length = 395
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 180 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 238
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 239 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 295
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 296 EGAMAFFDVFAMPADAK 312
>gi|291281853|ref|YP_003498671.1| putrescine ABC transporter substrate-binding protein [Escherichia
coli O55:H7 str. CB9615]
gi|290761726|gb|ADD55687.1| Putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O55:H7 str. CB9615]
Length = 420
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 205 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 263
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 264 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 320
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 321 EGAMAFFDVFAMPADAK 337
>gi|400289028|ref|ZP_10791060.1| extracellular solute-binding protein [Psychrobacter sp. PAMC 21119]
Length = 377
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 104/224 (46%), Gaps = 31/224 (13%)
Query: 16 APIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID-LQVAGGKISVQQNL 74
A + W DLW P+ G++ + N REV G L +G S NS N D ++ A K++
Sbjct: 173 ATVNSWNDLWDPKYKGQVMLTNDVREVFGMALLTLGYSGNSRNPDEIKAAYDKLTT---- 228
Query: 75 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSD-VLPAVKRMSNVAVVVPKSGASLWADL 133
L+ N + F+S + G+ + + W+ + V+ + ++++ P GA LW D
Sbjct: 229 -LMPN-VKTFNSDATRMPYIEGETSLGMTWNGEAVMANDEGLTSLVYKYPSEGAILWMDN 286
Query: 134 WAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVK 193
+ IP + KQ+ H++I++ L+ A +E I ASP+ L+
Sbjct: 287 FVIPKNA----KQVDA--------AHKFIDYLLRPENAKIVSEE-IGYASPNIAARELM- 332
Query: 194 LPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
+E ++ P+ P EILA+ EF E + + L Y+
Sbjct: 333 --DESVRNNPTI-------YPSQEILAKAEFQEDVGDEALQVYQ 367
>gi|417742354|ref|ZP_12390904.1| potF [Shigella flexneri 2930-71]
gi|417826927|ref|ZP_12473500.1| potF [Shigella flexneri J1713]
gi|332768025|gb|EGJ98211.1| potF [Shigella flexneri 2930-71]
gi|335576695|gb|EGM62940.1| potF [Shigella flexneri J1713]
Length = 353
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 138 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 196
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 197 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 253
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 254 EGAMAFFDVFAMPADAK 270
>gi|422765428|ref|ZP_16819155.1| bacterial extracellular solute-binding protein [Escherichia coli
E1520]
gi|323937961|gb|EGB34223.1| bacterial extracellular solute-binding protein [Escherichia coli
E1520]
Length = 395
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 180 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 238
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 239 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 295
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 296 EGAMAFFDVFAMPADAK 312
>gi|156934649|ref|YP_001438565.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Cronobacter sakazakii ATCC BAA-894]
gi|156532903|gb|ABU77729.1| hypothetical protein ESA_02483 [Cronobacter sakazakii ATCC BAA-894]
Length = 393
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 17/157 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS+ D +G +
Sbjct: 178 APLNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYSGAATDL 236
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R N++ +PK
Sbjct: 237 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNISYTIPK 293
Query: 125 SGASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH 159
GA + D++A+P A ++ E Q + P + H
Sbjct: 294 EGALAFFDVFAMPADAKNKDEAYQFLNYLMRPDVMAH 330
>gi|417737718|ref|ZP_12386319.1| putrescine-binding periplasmic protein [Shigella flexneri 4343-70]
gi|332759765|gb|EGJ90068.1| putrescine-binding periplasmic protein [Shigella flexneri 4343-70]
Length = 353
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 138 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 196
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 197 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 253
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 254 EGAMAFFDVFAMPADAK 270
>gi|300902387|ref|ZP_07120370.1| bacterial extracellular solute-binding protein [Escherichia coli MS
84-1]
gi|301305374|ref|ZP_07211469.1| bacterial extracellular solute-binding protein [Escherichia coli MS
124-1]
gi|415860860|ref|ZP_11534575.1| bacterial extracellular solute-binding protein [Escherichia coli MS
85-1]
gi|300405534|gb|EFJ89072.1| bacterial extracellular solute-binding protein [Escherichia coli MS
84-1]
gi|300839392|gb|EFK67152.1| bacterial extracellular solute-binding protein [Escherichia coli MS
124-1]
gi|315257890|gb|EFU37858.1| bacterial extracellular solute-binding protein [Escherichia coli MS
85-1]
Length = 395
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 180 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 238
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 239 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 295
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 296 EGAMAFFDVFAMPADAK 312
>gi|300901217|ref|ZP_07119319.1| bacterial extracellular solute-binding protein [Escherichia coli MS
198-1]
gi|300939899|ref|ZP_07154534.1| bacterial extracellular solute-binding protein [Escherichia coli MS
21-1]
gi|331672393|ref|ZP_08373184.1| putrescine-binding periplasmic protein [Escherichia coli TA280]
gi|300355342|gb|EFJ71212.1| bacterial extracellular solute-binding protein [Escherichia coli MS
198-1]
gi|300455281|gb|EFK18774.1| bacterial extracellular solute-binding protein [Escherichia coli MS
21-1]
gi|331070588|gb|EGI41952.1| putrescine-binding periplasmic protein [Escherichia coli TA280]
Length = 395
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 180 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 238
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 239 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 295
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 296 EGAMAFFDVFAMPADAK 312
>gi|389690758|ref|ZP_10179651.1| spermidine/putrescine-binding periplasmic protein [Microvirga sp.
WSM3557]
gi|388589001|gb|EIM29290.1| spermidine/putrescine-binding periplasmic protein [Microvirga sp.
WSM3557]
Length = 361
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 18/137 (13%)
Query: 17 PIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISV 70
P+ W + +PE+A + I M++SP ++ VL Y+G + +S DL AG
Sbjct: 148 PLNTWDLVLKPEIASKLKACGIYMLDSPEDLFPGVLAYLGLNPDSKRTEDLNKAGDA--- 204
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L + + F S+ Y+ A GD+ VAVG+S D++ A R V V+P+
Sbjct: 205 ---LFRIRGNIQKFHSSEYINALANGDICVAVGYSGDMIQAKNRAEEAKNGVEVGYVIPR 261
Query: 125 SGASLWADLWAIPAASR 141
GA +W D +AIPA ++
Sbjct: 262 EGALMWFDSFAIPADAK 278
>gi|300929337|ref|ZP_07144810.1| bacterial extracellular solute-binding protein [Escherichia coli MS
187-1]
gi|422785446|ref|ZP_16838185.1| extracellular solute-binding protein [Escherichia coli H489]
gi|300462683|gb|EFK26176.1| bacterial extracellular solute-binding protein [Escherichia coli MS
187-1]
gi|323962967|gb|EGB58539.1| extracellular solute-binding protein [Escherichia coli H489]
Length = 395
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 180 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 238
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 239 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 295
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 296 EGAMAFFDVFAMPADAK 312
>gi|384542392|ref|YP_005726454.1| Putrescine-binding periplasmic protein [Shigella flexneri 2002017]
gi|281600177|gb|ADA73161.1| Putrescine-binding periplasmic protein [Shigella flexneri 2002017]
Length = 395
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 180 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 238
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 239 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 295
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 296 EGAMAFFDVFAMPADAK 312
>gi|452970892|ref|ZP_21969119.1| putrescine/spermidine ABC transporter substrate-binding protein
[Escherichia coli O157:H7 str. EC4009]
Length = 353
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 138 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 196
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 197 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 253
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 254 EGAMAFFDVFAMPADAK 270
>gi|110804852|ref|YP_688372.1| spermidine/putrescine ABC transporter substrate-binding protein
[Shigella flexneri 5 str. 8401]
gi|424837314|ref|ZP_18261951.1| putrescine ABC transporter periplasmic-binding protein [Shigella
flexneri 5a str. M90T]
gi|110614400|gb|ABF03067.1| Putrescine-binding periplasmic protein precursor [Shigella flexneri
5 str. 8401]
gi|383466366|gb|EID61387.1| putrescine ABC transporter periplasmic-binding protein [Shigella
flexneri 5a str. M90T]
Length = 395
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 180 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 238
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 239 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 295
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 296 EGAMAFFDVFAMPADAK 312
>gi|432946095|ref|ZP_20141788.1| putrescine-binding periplasmic protein [Escherichia coli KTE196]
gi|433042361|ref|ZP_20229883.1| putrescine-binding periplasmic protein [Escherichia coli KTE117]
gi|431462087|gb|ELH42305.1| putrescine-binding periplasmic protein [Escherichia coli KTE196]
gi|431559359|gb|ELI32919.1| putrescine-binding periplasmic protein [Escherichia coli KTE117]
Length = 370
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTG----PA 210
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
+ L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 211 TELLLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|398925198|ref|ZP_10661743.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
gi|398172395|gb|EJM60261.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
Length = 362
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 64/133 (48%), Gaps = 18/133 (13%)
Query: 18 IEDWKDLWRPE-----LAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W L+ PE A +SM++S EV ++L YMG S N D + A K
Sbjct: 150 IDSWAVLFEPENIKKLSACGVSMMDSADEVFPAILNYMGMDPRSENPEDFKKAEAK---- 205
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
L + F S+ Y+ GD+ VA G+S DV A R N+A +PK
Sbjct: 206 --LLAIRPYITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKE 263
Query: 126 GASLWADLWAIPA 138
GA+LW DL A+PA
Sbjct: 264 GANLWFDLLAVPA 276
>gi|163847330|ref|YP_001635374.1| extracellular solute-binding protein [Chloroflexus aurantiacus
J-10-fl]
gi|163668619|gb|ABY34985.1| extracellular solute-binding protein family 1 [Chloroflexus
aurantiacus J-10-fl]
Length = 312
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 69/127 (54%), Gaps = 9/127 (7%)
Query: 17 PIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV-QQNLA 75
PI W DLW+P+LAG+I + PR+ I +LK +G S N+ + G+++V ++ A
Sbjct: 107 PITRWADLWKPDLAGKIVLWPIPRDTINVLLKSLGYSINTTD------PGQLAVARERAA 160
Query: 76 LLANQARLF-DSTHYLKAFGIGDVW-VAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADL 133
LA++ L + + + + D VA+GW+ D A + N+A ++P G LW D
Sbjct: 161 ELAHRVTLTQEGDEVVTPYLLSDEHVVALGWTYDAFDAQAQNENIAYIIPAEGTILWFDN 220
Query: 134 WAIPAAS 140
+ IP S
Sbjct: 221 FVIPTTS 227
>gi|222525176|ref|YP_002569647.1| family 1 extracellular solute-binding protein [Chloroflexus sp.
Y-400-fl]
gi|222449055|gb|ACM53321.1| extracellular solute-binding protein family 1 [Chloroflexus sp.
Y-400-fl]
Length = 350
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 69/127 (54%), Gaps = 9/127 (7%)
Query: 17 PIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV-QQNLA 75
PI W DLW+P+LAG+I + PR+ I +LK +G S N+ + G+++V ++ A
Sbjct: 145 PITRWADLWKPDLAGKIVLWPIPRDTINVLLKSLGYSINTTD------PGQLAVARERAA 198
Query: 76 LLANQARLF-DSTHYLKAFGIGDVW-VAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADL 133
LA++ L + + + + D VA+GW+ D A + N+A ++P G LW D
Sbjct: 199 ELAHRVTLTQEGDEVVTPYLLSDEHVVALGWTYDAFDAQAQNENIAYIIPAEGTILWFDN 258
Query: 134 WAIPAAS 140
+ IP S
Sbjct: 259 FVIPTTS 265
>gi|147334|gb|AAA24409.1| periplasmic putrescine binding protein [Escherichia coli]
Length = 370
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 21/140 (15%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGK--- 67
AP++ W + +PE + +S +++P EV +VL Y+G NS D
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLL 214
Query: 68 ISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVV 121
++V+ N+ R F S+ Y+ GD+ VA+GW+ DV A R NV+
Sbjct: 215 LNVRPNI-------RYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFS 267
Query: 122 VPKSGASLWADLWAIPAASR 141
+PK GA + D++A+PA ++
Sbjct: 268 IPKEGAMAFFDVFAMPADAK 287
>gi|425421448|ref|ZP_18802655.1| putrescine-binding periplasmic protein [Escherichia coli 0.1288]
gi|408347112|gb|EKJ61346.1| putrescine-binding periplasmic protein [Escherichia coli 0.1288]
Length = 370
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWNLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|344341161|ref|ZP_08772083.1| extracellular solute-binding protein family 1 [Thiocapsa marina
5811]
gi|343799041|gb|EGV16993.1| extracellular solute-binding protein family 1 [Thiocapsa marina
5811]
Length = 367
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 77/176 (43%), Gaps = 32/176 (18%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNS-NNIDLQVAGGKIS 69
A ++ W ++ PE A + IS+++ P EV + L Y+G NS + DL A I
Sbjct: 153 ADLDTWALVFDPETASKLGDCGISLLDDPTEVYSAALAYLGKDPNSLDKDDLDAASALIK 212
Query: 70 VQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVP 123
+ R F S+ Y+ GD+ VA+G+S DV A R + V+P
Sbjct: 213 A------IHPHVRYFHSSQYMSDLANGDLCVAMGYSGDVFQAQSRAEEAGKGVVIDYVIP 266
Query: 124 KSGASLWADLWAIPAASRLETKQIGGRVRGPSP-LIHQWIEFCLQTARALPFKQEV 178
+ GA++W D+ AIP P+P H +I + LQ A EV
Sbjct: 267 REGAAVWTDVMAIPK-------------DAPNPAAAHAFIAYMLQPAAIAAVSNEV 309
>gi|323494348|ref|ZP_08099460.1| extracellular solute-binding protein family 1 [Vibrio brasiliensis
LMG 20546]
gi|323311511|gb|EGA64663.1| extracellular solute-binding protein family 1 [Vibrio brasiliensis
LMG 20546]
Length = 369
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 21/140 (15%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W +++PE + + +N+P E++ + L Y+G NS + + K
Sbjct: 155 APVDSWDLVFKPENMEKLAQCGVGFLNAPSEIMAASLNYLGKDPNST----KTSDYK--- 207
Query: 71 QQNLALLAN---QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVV 121
+ LALL + F S+ Y+ GD+ VA+GWS DVL A R + +A
Sbjct: 208 KDALALLKDIRPYVTYFHSSQYINDLANGDICVAIGWSGDVLQAADRAAEADNGVEIAYS 267
Query: 122 VPKSGASLWADLWAIPAASR 141
+PK GA W DL AIP ++
Sbjct: 268 IPKEGALAWFDLMAIPKEAK 287
>gi|301027634|ref|ZP_07190954.1| bacterial extracellular solute-binding protein [Escherichia coli MS
196-1]
gi|299879236|gb|EFI87447.1| bacterial extracellular solute-binding protein [Escherichia coli MS
196-1]
Length = 370
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|398854217|ref|ZP_10610791.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM80]
gi|398236715|gb|EJN22488.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM80]
Length = 362
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 67/134 (50%), Gaps = 20/134 (14%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKI-SV 70
I+ W L+ PE + +SM++S EV +VL YMG S N D + A K+ S+
Sbjct: 150 IDSWAVLFEPENLKKLTQCGVSMMDSADEVFPAVLNYMGMDPRSENPEDYKKAEAKLLSI 209
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
+ + F S+ Y+ GD+ VA G+S DV A R N+A +PK
Sbjct: 210 RPYITY-------FHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPK 262
Query: 125 SGASLWADLWAIPA 138
GA+LW DL AIPA
Sbjct: 263 EGANLWFDLLAIPA 276
>gi|398984257|ref|ZP_10690526.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM24]
gi|399011979|ref|ZP_10714307.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM16]
gi|398116585|gb|EJM06344.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM16]
gi|398155956|gb|EJM44383.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM24]
Length = 362
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 67/134 (50%), Gaps = 20/134 (14%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKI-SV 70
I+ W L+ PE + +SM++S EV +VL YMG S N D + A K+ S+
Sbjct: 150 IDSWAVLFEPENLKKLTQCGVSMMDSADEVFPAVLNYMGMDPRSENPEDYKKAEAKLLSI 209
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
+ + F S+ Y+ GD+ VA G+S DV A R N+A +PK
Sbjct: 210 RPYITY-------FHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPK 262
Query: 125 SGASLWADLWAIPA 138
GA+LW DL AIPA
Sbjct: 263 EGANLWFDLLAIPA 276
>gi|157375543|ref|YP_001474143.1| putrescine-binding periplasmic protein [Shewanella sediminis
HAW-EB3]
gi|157317917|gb|ABV37015.1| putrescine-binding periplasmic protein precursor [Shewanella
sediminis HAW-EB3]
Length = 362
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 76/137 (55%), Gaps = 18/137 (13%)
Query: 17 PIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISV 70
P+ W+ L++ ++ + ++MV++P EV+ ++LKY+G + NS ++ DL++ V
Sbjct: 149 PVNTWELLFQVDIVSKFTDCGVAMVDAPSEVVSAMLKYLGKNPNSQDLADLKL------V 202
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM------SNVAVVVPK 124
+++L + F S+ Y+ G++ +A+GWS DV A R NV V+P+
Sbjct: 203 EEHLLKIRPYITYFHSSSYVTDLASGNICLAMGWSGDVFMAANRAIEAKNGINVNYVIPR 262
Query: 125 SGASLWADLWAIPAASR 141
GA WAD + I + S+
Sbjct: 263 EGAQGWADTFNITSDSK 279
>gi|432977512|ref|ZP_20166335.1| putrescine-binding periplasmic protein [Escherichia coli KTE209]
gi|433086463|ref|ZP_20272858.1| putrescine-binding periplasmic protein [Escherichia coli KTE137]
gi|431481023|gb|ELH60737.1| putrescine-binding periplasmic protein [Escherichia coli KTE209]
gi|431609120|gb|ELI78453.1| putrescine-binding periplasmic protein [Escherichia coli KTE137]
Length = 370
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|238022429|ref|ZP_04602855.1| hypothetical protein GCWU000324_02336 [Kingella oralis ATCC 51147]
gi|237867043|gb|EEP68085.1| hypothetical protein GCWU000324_02336 [Kingella oralis ATCC 51147]
Length = 382
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 29/162 (17%)
Query: 17 PIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISV 70
P +W ++ PE G+ IS +SP E VLKY+G NSN+ DL+ A
Sbjct: 170 PANEWDLVFNPEYTGKLKHCGISFFDSPTEQFPLVLKYIGKDPNSNDKADLEAAA----- 224
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM-----SNVAVVVPKS 125
+ + + + RLF S+ Y+ G++ VA+G+ D+ A +R +++ V+ PK+
Sbjct: 225 -ETMRKVRHDVRLFSSSGYINNLAQGNLCVAIGYGGDLNIAKRRAAEIGNNDIQVLTPKT 283
Query: 126 GASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQ 167
G +W D + IP + K I H++I + L
Sbjct: 284 GVGIWIDSFMIPK----DAKNIAN--------AHKYINYTLD 313
>gi|218553440|ref|YP_002386353.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli IAI1]
gi|417130876|ref|ZP_11976147.1| putrescine-binding periplasmic protein [Escherichia coli 5.0588]
gi|419806824|ref|ZP_14331914.1| bacterial extracellular solute-binding protein [Escherichia coli
AI27]
gi|419952129|ref|ZP_14468305.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli CUMT8]
gi|432749336|ref|ZP_19983948.1| putrescine-binding periplasmic protein [Escherichia coli KTE29]
gi|432804981|ref|ZP_20038922.1| putrescine-binding periplasmic protein [Escherichia coli KTE91]
gi|432933420|ref|ZP_20133088.1| putrescine-binding periplasmic protein [Escherichia coli KTE184]
gi|432966952|ref|ZP_20155868.1| putrescine-binding periplasmic protein [Escherichia coli KTE203]
gi|433192847|ref|ZP_20376859.1| putrescine-binding periplasmic protein [Escherichia coli KTE90]
gi|218360208|emb|CAQ97758.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli IAI1]
gi|384470184|gb|EIE54305.1| bacterial extracellular solute-binding protein [Escherichia coli
AI27]
gi|386153984|gb|EIH05265.1| putrescine-binding periplasmic protein [Escherichia coli 5.0588]
gi|388413096|gb|EIL73112.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli CUMT8]
gi|431298626|gb|ELF88250.1| putrescine-binding periplasmic protein [Escherichia coli KTE29]
gi|431356593|gb|ELG43283.1| putrescine-binding periplasmic protein [Escherichia coli KTE91]
gi|431455062|gb|ELH35418.1| putrescine-binding periplasmic protein [Escherichia coli KTE184]
gi|431472924|gb|ELH52758.1| putrescine-binding periplasmic protein [Escherichia coli KTE203]
gi|431720070|gb|ELJ84105.1| putrescine-binding periplasmic protein [Escherichia coli KTE90]
Length = 370
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|429081852|ref|ZP_19144947.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter condimenti 1330]
gi|426549418|emb|CCJ70988.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter condimenti 1330]
Length = 370
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 17/157 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS+ D ++
Sbjct: 155 APLNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD----DYSVAA 210
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R N++ +PK
Sbjct: 211 TDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNISYTIPK 270
Query: 125 SGASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH 159
GA + D++A+P A ++ E Q + P + H
Sbjct: 271 EGALAFFDVFAMPADAKNKDEAYQFLNYLMRPDVMAH 307
>gi|186686044|ref|YP_001869240.1| extracellular solute-binding protein [Nostoc punctiforme PCC 73102]
gi|186468496|gb|ACC84297.1| extracellular solute-binding protein, family 1 [Nostoc punctiforme
PCC 73102]
Length = 361
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 34/216 (15%)
Query: 19 EDWKDLWRPE--LAGRISMVNSPREVIGSVLKYMGASYNS-NNIDLQVAGGKISVQQNLA 75
+DW LW+ + L R++++N REV+G+ L+ +G SYNS N +++ A K+ V
Sbjct: 161 QDWDYLWQNQEKLNQRMTLLNDVREVMGATLRMLGYSYNSKNEQEIKQAYEKLKV----- 215
Query: 76 LLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWA 135
L AR FD+ + GD+ +A+ +S+D + + + V+P+SG+SLW D
Sbjct: 216 LKPAIAR-FDTDAWQNQILAGDLLLAMCYSADAVKIAQENPKLKYVIPRSGSSLWTDTIV 274
Query: 136 IPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEV-IPGASPSALETTLVKL 194
IP + + G + WI LQ A Q + I + + E +L
Sbjct: 275 IPKTA----PNLAG--------AYAWINMILQPELAAQISQRLSISTPNRAGFE----QL 318
Query: 195 PEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSE 230
P+ + + NL P +LA CE + P+ +
Sbjct: 319 PKTI-----QDNANLF---PAESLLANCERVTPVGD 346
>gi|74311398|ref|YP_309817.1| putrescine ABC transporter periplasmic-binding protein [Shigella
sonnei Ss046]
gi|383177490|ref|YP_005455495.1| putrescine ABC transporter periplasmic-binding protein [Shigella
sonnei 53G]
gi|414575112|ref|ZP_11432318.1| putrescine-binding periplasmic protein [Shigella sonnei 3233-85]
gi|415850294|ref|ZP_11527214.1| putrescine-binding periplasmic protein [Shigella sonnei 53G]
gi|418263261|ref|ZP_12884326.1| potF [Shigella sonnei str. Moseley]
gi|420357600|ref|ZP_14858606.1| putrescine-binding periplasmic protein [Shigella sonnei 3226-85]
gi|420362455|ref|ZP_14863371.1| potF [Shigella sonnei 4822-66]
gi|73854875|gb|AAZ87582.1| periplasmic putrescine-binding protein [Shigella sonnei Ss046]
gi|323165787|gb|EFZ51573.1| putrescine-binding periplasmic protein [Shigella sonnei 53G]
gi|391287188|gb|EIQ45719.1| putrescine-binding periplasmic protein [Shigella sonnei 3226-85]
gi|391288061|gb|EIQ46570.1| putrescine-binding periplasmic protein [Shigella sonnei 3233-85]
gi|391296028|gb|EIQ54144.1| potF [Shigella sonnei 4822-66]
gi|397902732|gb|EJL19044.1| potF [Shigella sonnei str. Moseley]
Length = 370
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|417601190|ref|ZP_12251772.1| putrescine-binding periplasmic protein [Escherichia coli STEC_94C]
gi|345353196|gb|EGW85432.1| putrescine-binding periplasmic protein [Escherichia coli STEC_94C]
Length = 370
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|422806126|ref|ZP_16854558.1| extracellular solute-binding protein [Escherichia fergusonii B253]
gi|324112664|gb|EGC06640.1| extracellular solute-binding protein [Escherichia fergusonii B253]
Length = 370
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|422830736|ref|ZP_16878890.1| putrescine-binding periplasmic protein [Escherichia coli B093]
gi|371603842|gb|EHN92477.1| putrescine-binding periplasmic protein [Escherichia coli B093]
Length = 370
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|417789994|ref|ZP_12437590.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Cronobacter sakazakii E899]
gi|449308836|ref|YP_007441192.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Cronobacter sakazakii SP291]
gi|333955915|gb|EGL73622.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Cronobacter sakazakii E899]
gi|449098869|gb|AGE86903.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Cronobacter sakazakii SP291]
Length = 370
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 17/157 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS+ D +G +
Sbjct: 155 APLNSWDLVLKPENLKKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYSGAATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R N++ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNISYTIPK 270
Query: 125 SGASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH 159
GA + D++A+P A ++ E Q + P + H
Sbjct: 271 EGALAFFDVFAMPADAKNKDEAYQFLNYLMRPDVMAH 307
>gi|191166164|ref|ZP_03027998.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli B7A]
gi|417595859|ref|ZP_12246518.1| putrescine-binding periplasmic protein [Escherichia coli 3030-1]
gi|190903773|gb|EDV63488.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli B7A]
gi|345358605|gb|EGW90788.1| putrescine-binding periplasmic protein [Escherichia coli 3030-1]
Length = 370
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|407364788|ref|ZP_11111320.1| extracellular solute-binding protein [Pseudomonas mandelii JR-1]
Length = 362
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 68/134 (50%), Gaps = 20/134 (14%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKI-SV 70
I+ W+ L+ PE + +SM++S EV ++L YMG S N D + A K+ S+
Sbjct: 150 IDSWEVLFEPENIKKLSQCGVSMMDSADEVFPAILNYMGMDPRSENPEDFKKAEAKLLSI 209
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
+ + F S+ Y+ GD+ VA G+S DV A R N+A +PK
Sbjct: 210 RPYITY-------FHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPK 262
Query: 125 SGASLWADLWAIPA 138
G++LW DL AIPA
Sbjct: 263 EGSNLWFDLLAIPA 276
>gi|419917933|ref|ZP_14436152.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli KD2]
gi|432792074|ref|ZP_20026164.1| putrescine-binding periplasmic protein [Escherichia coli KTE78]
gi|432798037|ref|ZP_20032062.1| putrescine-binding periplasmic protein [Escherichia coli KTE79]
gi|388392734|gb|EIL54143.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli KD2]
gi|431341656|gb|ELG28662.1| putrescine-binding periplasmic protein [Escherichia coli KTE78]
gi|431345059|gb|ELG31991.1| putrescine-binding periplasmic protein [Escherichia coli KTE79]
Length = 370
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|170682561|ref|YP_001742962.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli SMS-3-5]
gi|218699230|ref|YP_002406859.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli IAI39]
gi|222155578|ref|YP_002555717.1| Putrescine-binding periplasmic protein [Escherichia coli LF82]
gi|386623257|ref|YP_006142985.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O7:K1 str. CE10]
gi|387616110|ref|YP_006119132.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O83:H1 str. NRG 857C]
gi|170520279|gb|ACB18457.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli SMS-3-5]
gi|218369216|emb|CAR16971.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli IAI39]
gi|222032583|emb|CAP75322.1| Putrescine-binding periplasmic protein [Escherichia coli LF82]
gi|312945371|gb|ADR26198.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O83:H1 str. NRG 857C]
gi|349736995|gb|AEQ11701.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O7:K1 str. CE10]
Length = 370
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|16128822|ref|NP_415375.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli str. K-12 substr.
MG1655]
gi|82543342|ref|YP_407289.1| putrescine ABC transporter periplasmic-binding protein [Shigella
boydii Sb227]
gi|170080513|ref|YP_001729833.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli str. K-12 substr. DH10B]
gi|187731226|ref|YP_001880949.1| putrescine ABC transporter periplasmic-binding protein [Shigella
boydii CDC 3083-94]
gi|218694328|ref|YP_002401995.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli 55989]
gi|238900113|ref|YP_002925909.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli BW2952]
gi|293433152|ref|ZP_06661580.1| hypothetical protein ECCG_01277 [Escherichia coli B088]
gi|331667228|ref|ZP_08368093.1| putrescine-binding periplasmic protein [Escherichia coli TA271]
gi|386279901|ref|ZP_10057574.1| putrescine-binding periplasmic protein [Escherichia sp. 4_1_40B]
gi|386596310|ref|YP_006092710.1| extracellular solute-binding protein [Escherichia coli DH1]
gi|387620580|ref|YP_006128207.1| putrescine transporter subunit:periplasmic-binding component of ABC
superfamily [Escherichia coli DH1]
gi|388476939|ref|YP_489127.1| putrescine transporter subunit [Escherichia coli str. K-12 substr.
W3110]
gi|407468328|ref|YP_006785230.1| putrescine ABC transporter substrate-binding protein [Escherichia
coli O104:H4 str. 2009EL-2071]
gi|407482940|ref|YP_006780089.1| putrescine ABC transporter substrate-binding protein [Escherichia
coli O104:H4 str. 2011C-3493]
gi|410483492|ref|YP_006771038.1| putrescine ABC transporter substrate-binding protein [Escherichia
coli O104:H4 str. 2009EL-2050]
gi|415812750|ref|ZP_11504845.1| putrescine-binding periplasmic protein [Escherichia coli LT-68]
gi|415827641|ref|ZP_11514466.1| putrescine-binding periplasmic protein [Escherichia coli OK1357]
gi|416267761|ref|ZP_11641934.1| Putrescine ABC transporter putrescine-binding protein PotF
[Shigella dysenteriae CDC 74-1112]
gi|416304941|ref|ZP_11654096.1| Putrescine ABC transporter putrescine-binding protein PotF
[Shigella flexneri CDC 796-83]
gi|416345141|ref|ZP_11678784.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli EC4100B]
gi|417224560|ref|ZP_12027851.1| putrescine-binding periplasmic protein [Escherichia coli 96.154]
gi|417241354|ref|ZP_12037300.1| putrescine-binding periplasmic protein [Escherichia coli 9.0111]
gi|417262034|ref|ZP_12049522.1| putrescine-binding periplasmic protein [Escherichia coli 2.3916]
gi|417268341|ref|ZP_12055702.1| putrescine-binding periplasmic protein [Escherichia coli 3.3884]
gi|417274279|ref|ZP_12061619.1| putrescine-binding periplasmic protein [Escherichia coli 2.4168]
gi|417277787|ref|ZP_12065108.1| putrescine-binding periplasmic protein [Escherichia coli 3.2303]
gi|417290075|ref|ZP_12077358.1| putrescine-binding periplasmic protein [Escherichia coli B41]
gi|417607078|ref|ZP_12257597.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_DG131-3]
gi|417611949|ref|ZP_12262421.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_EH250]
gi|417617293|ref|ZP_12267723.1| putrescine-binding periplasmic protein [Escherichia coli G58-1]
gi|417633487|ref|ZP_12283706.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_S1191]
gi|417681255|ref|ZP_12330633.1| putrescine-binding periplasmic protein [Shigella boydii 3594-74]
gi|417804235|ref|ZP_12451266.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str. LB226692]
gi|417831986|ref|ZP_12478506.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str. 01-09591]
gi|417864139|ref|ZP_12509186.1| potF [Escherichia coli O104:H4 str. C227-11]
gi|417943847|ref|ZP_12587093.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli XH140A]
gi|417975178|ref|ZP_12615978.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli XH001]
gi|418042980|ref|ZP_12681161.1| bacterial extracellular solute-binding protein [Escherichia coli
W26]
gi|418301780|ref|ZP_12913574.1| putrescine-binding periplasmic protein [Escherichia coli UMNF18]
gi|418958811|ref|ZP_13510721.1| bacterial extracellular solute-binding protein [Escherichia coli
J53]
gi|419141372|ref|ZP_13686126.1| putrescine-binding periplasmic protein [Escherichia coli DEC6A]
gi|419152772|ref|ZP_13697355.1| putrescine-binding periplasmic protein [Escherichia coli DEC6C]
gi|419158187|ref|ZP_13702704.1| putrescine-binding periplasmic protein [Escherichia coli DEC6D]
gi|419163121|ref|ZP_13707597.1| potF [Escherichia coli DEC6E]
gi|419174361|ref|ZP_13718213.1| potF [Escherichia coli DEC7B]
gi|419277125|ref|ZP_13819386.1| potF [Escherichia coli DEC10E]
gi|419344479|ref|ZP_13885861.1| potF [Escherichia coli DEC13A]
gi|419348918|ref|ZP_13890271.1| potF [Escherichia coli DEC13B]
gi|419353906|ref|ZP_13895188.1| potF [Escherichia coli DEC13C]
gi|419359301|ref|ZP_13900526.1| potF [Escherichia coli DEC13D]
gi|419364270|ref|ZP_13905448.1| potF [Escherichia coli DEC13E]
gi|419374613|ref|ZP_13915661.1| potF [Escherichia coli DEC14B]
gi|419379848|ref|ZP_13920820.1| potF [Escherichia coli DEC14C]
gi|419385250|ref|ZP_13926138.1| potF [Escherichia coli DEC14D]
gi|419390310|ref|ZP_13931144.1| potF [Escherichia coli DEC15A]
gi|419400824|ref|ZP_13941555.1| potF [Escherichia coli DEC15C]
gi|419406035|ref|ZP_13946734.1| potF [Escherichia coli DEC15D]
gi|419411498|ref|ZP_13952166.1| potF [Escherichia coli DEC15E]
gi|419809532|ref|ZP_14334417.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O32:H37 str. P4]
gi|419925739|ref|ZP_14443568.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 541-15]
gi|419940973|ref|ZP_14457687.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 75]
gi|420324628|ref|ZP_14826408.1| putrescine-binding periplasmic protein [Shigella flexneri CCH060]
gi|420353441|ref|ZP_14854558.1| putrescine-binding periplasmic protein [Shigella boydii 4444-74]
gi|421681582|ref|ZP_16121408.1| potF [Shigella flexneri 1485-80]
gi|422819882|ref|ZP_16868092.1| putrescine-binding periplasmic protein [Escherichia coli M919]
gi|422991589|ref|ZP_16982360.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. C227-11]
gi|422993531|ref|ZP_16984295.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. C236-11]
gi|422998742|ref|ZP_16989498.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 09-7901]
gi|423007203|ref|ZP_16997946.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 04-8351]
gi|423008849|ref|ZP_16999587.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-3677]
gi|423023037|ref|ZP_17013740.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4404]
gi|423028189|ref|ZP_17018882.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4522]
gi|423034023|ref|ZP_17024707.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4623]
gi|423036889|ref|ZP_17027563.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C1]
gi|423042008|ref|ZP_17032675.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C2]
gi|423048698|ref|ZP_17039355.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C3]
gi|423052280|ref|ZP_17041088.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C4]
gi|423059246|ref|ZP_17048042.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C5]
gi|423701702|ref|ZP_17676161.1| putrescine-binding periplasmic protein [Escherichia coli H730]
gi|423708776|ref|ZP_17683154.1| putrescine-binding periplasmic protein [Escherichia coli B799]
gi|425114214|ref|ZP_18516035.1| bacterial extracellular solute-binding protein [Escherichia coli
8.0566]
gi|425118923|ref|ZP_18520645.1| putrescine-binding periplasmic protein [Escherichia coli 8.0569]
gi|425271605|ref|ZP_18663100.1| putrescine-binding periplasmic protein [Escherichia coli TW15901]
gi|425282258|ref|ZP_18673363.1| putrescine-binding periplasmic protein [Escherichia coli TW00353]
gi|429723080|ref|ZP_19257969.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-9450]
gi|429775254|ref|ZP_19307252.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02030]
gi|429780443|ref|ZP_19312392.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02033-1]
gi|429784494|ref|ZP_19316403.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02092]
gi|429789831|ref|ZP_19321703.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02093]
gi|429796061|ref|ZP_19327884.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02281]
gi|429801986|ref|ZP_19333761.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02318]
gi|429805618|ref|ZP_19337362.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02913]
gi|429811214|ref|ZP_19342913.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-03439]
gi|429816565|ref|ZP_19348221.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-04080]
gi|429821773|ref|ZP_19353385.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-03943]
gi|429907442|ref|ZP_19373410.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-9990]
gi|429911643|ref|ZP_19377599.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-9941]
gi|429917478|ref|ZP_19383418.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4984]
gi|429922516|ref|ZP_19388437.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-5604]
gi|429923369|ref|ZP_19389285.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4986]
gi|429932264|ref|ZP_19398158.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4987]
gi|429933866|ref|ZP_19399756.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4988]
gi|429939525|ref|ZP_19405399.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-5603]
gi|429947167|ref|ZP_19413022.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-6006]
gi|429949799|ref|ZP_19415647.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec12-0465]
gi|429958077|ref|ZP_19423906.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec12-0466]
gi|432375966|ref|ZP_19618974.1| putrescine-binding periplasmic protein [Escherichia coli KTE12]
gi|432415841|ref|ZP_19658465.1| putrescine-binding periplasmic protein [Escherichia coli KTE44]
gi|432480228|ref|ZP_19722190.1| putrescine-binding periplasmic protein [Escherichia coli KTE210]
gi|432533080|ref|ZP_19770071.1| putrescine-binding periplasmic protein [Escherichia coli KTE234]
gi|432562836|ref|ZP_19799456.1| putrescine-binding periplasmic protein [Escherichia coli KTE51]
gi|432626460|ref|ZP_19862441.1| putrescine-binding periplasmic protein [Escherichia coli KTE77]
gi|432636127|ref|ZP_19872009.1| putrescine-binding periplasmic protein [Escherichia coli KTE81]
gi|432660081|ref|ZP_19895731.1| putrescine-binding periplasmic protein [Escherichia coli KTE111]
gi|432684658|ref|ZP_19919970.1| putrescine-binding periplasmic protein [Escherichia coli KTE156]
gi|432690779|ref|ZP_19926018.1| putrescine-binding periplasmic protein [Escherichia coli KTE161]
gi|432703423|ref|ZP_19938542.1| putrescine-binding periplasmic protein [Escherichia coli KTE171]
gi|432736354|ref|ZP_19971125.1| putrescine-binding periplasmic protein [Escherichia coli KTE42]
gi|432812956|ref|ZP_20046801.1| putrescine-binding periplasmic protein [Escherichia coli KTE101]
gi|432833936|ref|ZP_20067478.1| putrescine-binding periplasmic protein [Escherichia coli KTE136]
gi|432954154|ref|ZP_20146273.1| putrescine-binding periplasmic protein [Escherichia coli KTE197]
gi|433046991|ref|ZP_20234401.1| putrescine-binding periplasmic protein [Escherichia coli KTE120]
gi|442593231|ref|ZP_21011185.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|450240880|ref|ZP_21899436.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli S17]
gi|2507606|sp|P31133.3|POTF_ECOLI RecName: Full=Putrescine-binding periplasmic protein; Flags:
Precursor
gi|1651387|dbj|BAA35565.1| putrescine transporter subunit [Escherichia coli str. K12 substr.
W3110]
gi|1787078|gb|AAC73941.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli str. K-12 substr.
MG1655]
gi|81244753|gb|ABB65461.1| periplasmic putrescine-binding protein [Shigella boydii Sb227]
gi|169888348|gb|ACB02055.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli str. K-12 substr.
DH10B]
gi|187428218|gb|ACD07492.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Shigella boydii CDC 3083-94]
gi|218351060|emb|CAU96764.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 55989]
gi|238863342|gb|ACR65340.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli BW2952]
gi|260449999|gb|ACX40421.1| extracellular solute-binding protein family 1 [Escherichia coli
DH1]
gi|291323971|gb|EFE63393.1| hypothetical protein ECCG_01277 [Escherichia coli B088]
gi|315135503|dbj|BAJ42662.1| putrescine transporter subunit:periplasmic-binding component of ABC
superfamily [Escherichia coli DH1]
gi|320175294|gb|EFW50400.1| Putrescine ABC transporter putrescine-binding protein PotF
[Shigella dysenteriae CDC 74-1112]
gi|320183206|gb|EFW58064.1| Putrescine ABC transporter putrescine-binding protein PotF
[Shigella flexneri CDC 796-83]
gi|320199089|gb|EFW73686.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli EC4100B]
gi|323172180|gb|EFZ57818.1| putrescine-binding periplasmic protein [Escherichia coli LT-68]
gi|323185182|gb|EFZ70547.1| putrescine-binding periplasmic protein [Escherichia coli OK1357]
gi|331065584|gb|EGI37477.1| putrescine-binding periplasmic protein [Escherichia coli TA271]
gi|332097188|gb|EGJ02171.1| putrescine-binding periplasmic protein [Shigella boydii 3594-74]
gi|339413878|gb|AEJ55550.1| putrescine-binding periplasmic protein [Escherichia coli UMNF18]
gi|340735276|gb|EGR64334.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str. 01-09591]
gi|340741099|gb|EGR75249.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str. LB226692]
gi|341917428|gb|EGT67044.1| potF [Escherichia coli O104:H4 str. C227-11]
gi|342364333|gb|EGU28434.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli XH140A]
gi|344195169|gb|EGV49239.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli XH001]
gi|345363669|gb|EGW95810.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_DG131-3]
gi|345365298|gb|EGW97407.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_EH250]
gi|345380465|gb|EGX12364.1| putrescine-binding periplasmic protein [Escherichia coli G58-1]
gi|345390201|gb|EGX20000.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_S1191]
gi|354856591|gb|EHF17049.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 04-8351]
gi|354857838|gb|EHF18291.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. C227-11]
gi|354864606|gb|EHF25035.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. C236-11]
gi|354874919|gb|EHF35285.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 09-7901]
gi|354878879|gb|EHF39226.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4404]
gi|354882671|gb|EHF42993.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-3677]
gi|354884293|gb|EHF44606.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4522]
gi|354887350|gb|EHF47625.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4623]
gi|354900545|gb|EHF60679.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C1]
gi|354903690|gb|EHF63790.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C2]
gi|354906053|gb|EHF66135.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C3]
gi|354916970|gb|EHF76940.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C5]
gi|354921031|gb|EHF80956.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-4632 C4]
gi|359331546|dbj|BAL37993.1| putrescine transporter subunit [Escherichia coli str. K-12 substr.
MDS42]
gi|377998987|gb|EHV62074.1| putrescine-binding periplasmic protein [Escherichia coli DEC6A]
gi|378002122|gb|EHV65175.1| putrescine-binding periplasmic protein [Escherichia coli DEC6C]
gi|378012276|gb|EHV75208.1| putrescine-binding periplasmic protein [Escherichia coli DEC6D]
gi|378015823|gb|EHV78714.1| potF [Escherichia coli DEC6E]
gi|378036704|gb|EHV99243.1| potF [Escherichia coli DEC7B]
gi|378132294|gb|EHW93646.1| potF [Escherichia coli DEC10E]
gi|378188907|gb|EHX49501.1| potF [Escherichia coli DEC13A]
gi|378204580|gb|EHX64996.1| potF [Escherichia coli DEC13B]
gi|378206760|gb|EHX67162.1| potF [Escherichia coli DEC13D]
gi|378207878|gb|EHX68266.1| potF [Escherichia coli DEC13C]
gi|378217725|gb|EHX78001.1| potF [Escherichia coli DEC13E]
gi|378223981|gb|EHX84189.1| potF [Escherichia coli DEC14B]
gi|378232035|gb|EHX92138.1| potF [Escherichia coli DEC14C]
gi|378234699|gb|EHX94775.1| potF [Escherichia coli DEC14D]
gi|378242613|gb|EHY02565.1| potF [Escherichia coli DEC15A]
gi|378251129|gb|EHY11030.1| potF [Escherichia coli DEC15C]
gi|378256876|gb|EHY16721.1| potF [Escherichia coli DEC15D]
gi|378260718|gb|EHY20518.1| potF [Escherichia coli DEC15E]
gi|383474083|gb|EID66081.1| bacterial extracellular solute-binding protein [Escherichia coli
W26]
gi|384378552|gb|EIE36433.1| bacterial extracellular solute-binding protein [Escherichia coli
J53]
gi|385157713|gb|EIF19704.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O32:H37 str. P4]
gi|385536497|gb|EIF83390.1| putrescine-binding periplasmic protein [Escherichia coli M919]
gi|385707497|gb|EIG44528.1| putrescine-binding periplasmic protein [Escherichia coli B799]
gi|385711690|gb|EIG48647.1| putrescine-binding periplasmic protein [Escherichia coli H730]
gi|386122970|gb|EIG71574.1| putrescine-binding periplasmic protein [Escherichia sp. 4_1_40B]
gi|386199608|gb|EIH98599.1| putrescine-binding periplasmic protein [Escherichia coli 96.154]
gi|386212035|gb|EII22484.1| putrescine-binding periplasmic protein [Escherichia coli 9.0111]
gi|386225161|gb|EII47496.1| putrescine-binding periplasmic protein [Escherichia coli 2.3916]
gi|386230699|gb|EII58054.1| putrescine-binding periplasmic protein [Escherichia coli 3.3884]
gi|386232707|gb|EII64692.1| putrescine-binding periplasmic protein [Escherichia coli 2.4168]
gi|386239474|gb|EII76403.1| putrescine-binding periplasmic protein [Escherichia coli 3.2303]
gi|386256113|gb|EIJ05801.1| putrescine-binding periplasmic protein [Escherichia coli B41]
gi|388385634|gb|EIL47309.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 541-15]
gi|388401822|gb|EIL62435.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 75]
gi|391255716|gb|EIQ14857.1| putrescine-binding periplasmic protein [Shigella flexneri CCH060]
gi|391278930|gb|EIQ37626.1| putrescine-binding periplasmic protein [Shigella boydii 4444-74]
gi|404341533|gb|EJZ67939.1| potF [Shigella flexneri 1485-80]
gi|406778654|gb|AFS58078.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407055237|gb|AFS75288.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str.
2011C-3493]
gi|407064363|gb|AFS85410.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O104:H4 str.
2009EL-2071]
gi|408197064|gb|EKI22335.1| putrescine-binding periplasmic protein [Escherichia coli TW15901]
gi|408205387|gb|EKI30275.1| putrescine-binding periplasmic protein [Escherichia coli TW00353]
gi|408571926|gb|EKK47853.1| bacterial extracellular solute-binding protein [Escherichia coli
8.0566]
gi|408572938|gb|EKK48819.1| putrescine-binding periplasmic protein [Escherichia coli 8.0569]
gi|429349989|gb|EKY86724.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02030]
gi|429350701|gb|EKY87426.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02033-1]
gi|429351079|gb|EKY87800.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02092]
gi|429365357|gb|EKZ01970.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02093]
gi|429366308|gb|EKZ02911.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02281]
gi|429368871|gb|EKZ05454.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02318]
gi|429381278|gb|EKZ17765.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-02913]
gi|429382246|gb|EKZ18711.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-03439]
gi|429383681|gb|EKZ20140.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-03943]
gi|429395512|gb|EKZ31878.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. 11-04080]
gi|429396726|gb|EKZ33074.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-9450]
gi|429397604|gb|EKZ33950.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-9990]
gi|429409332|gb|EKZ45562.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4984]
gi|429417792|gb|EKZ53939.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4987]
gi|429421461|gb|EKZ57582.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4988]
gi|429423201|gb|EKZ59309.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-4986]
gi|429427203|gb|EKZ63288.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-5603]
gi|429434085|gb|EKZ70114.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-5604]
gi|429438072|gb|EKZ74066.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec12-0465]
gi|429443428|gb|EKZ79380.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-6006]
gi|429449531|gb|EKZ85430.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec12-0466]
gi|429455407|gb|EKZ91263.1| putrescine-binding periplasmic protein [Escherichia coli O104:H4
str. Ec11-9941]
gi|430900594|gb|ELC22612.1| putrescine-binding periplasmic protein [Escherichia coli KTE12]
gi|430942386|gb|ELC62519.1| putrescine-binding periplasmic protein [Escherichia coli KTE44]
gi|431009710|gb|ELD24324.1| putrescine-binding periplasmic protein [Escherichia coli KTE210]
gi|431062801|gb|ELD72061.1| putrescine-binding periplasmic protein [Escherichia coli KTE234]
gi|431097397|gb|ELE02725.1| putrescine-binding periplasmic protein [Escherichia coli KTE51]
gi|431164408|gb|ELE64799.1| putrescine-binding periplasmic protein [Escherichia coli KTE77]
gi|431173021|gb|ELE73102.1| putrescine-binding periplasmic protein [Escherichia coli KTE81]
gi|431201953|gb|ELF00649.1| putrescine-binding periplasmic protein [Escherichia coli KTE111]
gi|431224165|gb|ELF21394.1| putrescine-binding periplasmic protein [Escherichia coli KTE156]
gi|431229165|gb|ELF25817.1| putrescine-binding periplasmic protein [Escherichia coli KTE161]
gi|431245988|gb|ELF40266.1| putrescine-binding periplasmic protein [Escherichia coli KTE171]
gi|431285894|gb|ELF76729.1| putrescine-binding periplasmic protein [Escherichia coli KTE42]
gi|431356162|gb|ELG42853.1| putrescine-binding periplasmic protein [Escherichia coli KTE101]
gi|431386817|gb|ELG70770.1| putrescine-binding periplasmic protein [Escherichia coli KTE136]
gi|431469452|gb|ELH49381.1| putrescine-binding periplasmic protein [Escherichia coli KTE197]
gi|431571099|gb|ELI44006.1| putrescine-binding periplasmic protein [Escherichia coli KTE120]
gi|441606984|emb|CCP96512.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|449324103|gb|EMD14041.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli S17]
Length = 370
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|15800606|ref|NP_286620.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O157:H7 str. EDL933]
gi|15830188|ref|NP_308961.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O157:H7 str. Sakai]
gi|168750039|ref|ZP_02775061.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4113]
gi|168756649|ref|ZP_02781656.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4401]
gi|168763295|ref|ZP_02788302.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4501]
gi|168767365|ref|ZP_02792372.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4486]
gi|168776396|ref|ZP_02801403.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4196]
gi|168779407|ref|ZP_02804414.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4076]
gi|168787076|ref|ZP_02812083.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC869]
gi|168799863|ref|ZP_02824870.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC508]
gi|195936899|ref|ZP_03082281.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H7 str. EC4024]
gi|208806865|ref|ZP_03249202.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4206]
gi|208816015|ref|ZP_03257194.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4045]
gi|208822677|ref|ZP_03262996.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4042]
gi|209397481|ref|YP_002269524.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O157:H7 str. EC4115]
gi|217326518|ref|ZP_03442602.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. TW14588]
gi|254792050|ref|YP_003076887.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O157:H7 str. TW14359]
gi|261225504|ref|ZP_05939785.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily protein [Escherichia coli O157:H7 str.
FRIK2000]
gi|261258527|ref|ZP_05951060.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily protein [Escherichia coli O157:H7 str.
FRIK966]
gi|387505963|ref|YP_006158219.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O55:H7 str. RM12579]
gi|387881465|ref|YP_006311767.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli Xuzhou21]
gi|416309490|ref|ZP_11655862.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli O157:H7 str. 1044]
gi|416317369|ref|ZP_11660410.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli O157:H7 str. EC1212]
gi|416332128|ref|ZP_11670207.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli O157:H7 str. 1125]
gi|416781959|ref|ZP_11877428.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H7 str. G5101]
gi|416793190|ref|ZP_11882351.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H- str. 493-89]
gi|416804456|ref|ZP_11887211.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H- str. H 2687]
gi|416815481|ref|ZP_11891917.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O55:H7 str. 3256-97]
gi|416825314|ref|ZP_11896502.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O55:H7 str. USDA 5905]
gi|416836159|ref|ZP_11901774.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H7 str. LSU-61]
gi|419043994|ref|ZP_13590965.1| potF [Escherichia coli DEC3A]
gi|419049501|ref|ZP_13596417.1| potF [Escherichia coli DEC3B]
gi|419055582|ref|ZP_13602435.1| potF [Escherichia coli DEC3C]
gi|419061154|ref|ZP_13607933.1| potF [Escherichia coli DEC3D]
gi|419067252|ref|ZP_13613727.1| potF [Escherichia coli DEC3E]
gi|419074036|ref|ZP_13619604.1| potF [Escherichia coli DEC3F]
gi|419079265|ref|ZP_13624747.1| potF [Escherichia coli DEC4A]
gi|419084900|ref|ZP_13630309.1| potF [Escherichia coli DEC4B]
gi|419090906|ref|ZP_13636223.1| potF [Escherichia coli DEC4C]
gi|419096798|ref|ZP_13642040.1| potF [Escherichia coli DEC4D]
gi|419102640|ref|ZP_13647805.1| potF [Escherichia coli DEC4E]
gi|419108002|ref|ZP_13653111.1| potF [Escherichia coli DEC4F]
gi|419113771|ref|ZP_13658801.1| potF [Escherichia coli DEC5A]
gi|419119409|ref|ZP_13664387.1| potF [Escherichia coli DEC5B]
gi|419125105|ref|ZP_13670002.1| potF [Escherichia coli DEC5C]
gi|419130657|ref|ZP_13675504.1| potF [Escherichia coli DEC5D]
gi|419135384|ref|ZP_13680190.1| putrescine-binding periplasmic protein [Escherichia coli DEC5E]
gi|420268190|ref|ZP_14770594.1| putrescine-binding periplasmic protein [Escherichia coli PA22]
gi|420273938|ref|ZP_14776270.1| putrescine-binding periplasmic protein [Escherichia coli PA40]
gi|420279166|ref|ZP_14781431.1| putrescine-binding periplasmic protein [Escherichia coli TW06591]
gi|420285277|ref|ZP_14787492.1| putrescine-binding periplasmic protein [Escherichia coli TW10246]
gi|420291047|ref|ZP_14793210.1| putrescine-binding periplasmic protein [Escherichia coli TW11039]
gi|420296647|ref|ZP_14798740.1| putrescine-binding periplasmic protein [Escherichia coli TW09109]
gi|420302899|ref|ZP_14804925.1| putrescine-binding periplasmic protein [Escherichia coli TW10119]
gi|420308123|ref|ZP_14810095.1| putrescine-binding periplasmic protein [Escherichia coli EC1738]
gi|420313944|ref|ZP_14815849.1| putrescine-binding periplasmic protein [Escherichia coli EC1734]
gi|421811129|ref|ZP_16246928.1| bacterial extracellular solute-binding protein [Escherichia coli
8.0416]
gi|421817210|ref|ZP_16252765.1| putrescine-binding periplasmic protein [Escherichia coli 10.0821]
gi|421822614|ref|ZP_16258051.1| putrescine-binding periplasmic protein [Escherichia coli FRIK920]
gi|421829352|ref|ZP_16264679.1| putrescine-binding periplasmic protein [Escherichia coli PA7]
gi|423664786|ref|ZP_17639948.1| putrescine-binding periplasmic protein [Escherichia coli PA31]
gi|424075800|ref|ZP_17813140.1| putrescine-binding periplasmic protein [Escherichia coli FDA505]
gi|424082129|ref|ZP_17818980.1| putrescine-binding periplasmic protein [Escherichia coli FDA517]
gi|424088762|ref|ZP_17825008.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1996]
gi|424094974|ref|ZP_17830719.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1985]
gi|424101395|ref|ZP_17836540.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1990]
gi|424108193|ref|ZP_17842759.1| putrescine-binding periplasmic protein [Escherichia coli 93-001]
gi|424114185|ref|ZP_17848321.1| putrescine-binding periplasmic protein [Escherichia coli PA3]
gi|424120244|ref|ZP_17853937.1| putrescine-binding periplasmic protein [Escherichia coli PA5]
gi|424126484|ref|ZP_17859679.1| putrescine-binding periplasmic protein [Escherichia coli PA9]
gi|424132590|ref|ZP_17865381.1| putrescine-binding periplasmic protein [Escherichia coli PA10]
gi|424139133|ref|ZP_17871418.1| putrescine-binding periplasmic protein [Escherichia coli PA14]
gi|424145574|ref|ZP_17877334.1| putrescine-binding periplasmic protein [Escherichia coli PA15]
gi|424151707|ref|ZP_17882953.1| putrescine-binding periplasmic protein [Escherichia coli PA24]
gi|424190199|ref|ZP_17888392.1| putrescine-binding periplasmic protein [Escherichia coli PA25]
gi|424271769|ref|ZP_17894300.1| putrescine-binding periplasmic protein [Escherichia coli PA28]
gi|424425517|ref|ZP_17900023.1| putrescine-binding periplasmic protein [Escherichia coli PA32]
gi|424454119|ref|ZP_17905645.1| putrescine-binding periplasmic protein [Escherichia coli PA33]
gi|424460434|ref|ZP_17911345.1| putrescine-binding periplasmic protein [Escherichia coli PA39]
gi|424466903|ref|ZP_17917082.1| putrescine-binding periplasmic protein [Escherichia coli PA41]
gi|424473467|ref|ZP_17923127.1| putrescine-binding periplasmic protein [Escherichia coli PA42]
gi|424479398|ref|ZP_17928637.1| putrescine-binding periplasmic protein [Escherichia coli TW07945]
gi|424485468|ref|ZP_17934323.1| putrescine-binding periplasmic protein [Escherichia coli TW09098]
gi|424491650|ref|ZP_17939985.1| putrescine-binding periplasmic protein [Escherichia coli TW09195]
gi|424498687|ref|ZP_17945949.1| putrescine-binding periplasmic protein [Escherichia coli EC4203]
gi|424504922|ref|ZP_17951683.1| putrescine-binding periplasmic protein [Escherichia coli EC4196]
gi|424511172|ref|ZP_17957385.1| putrescine-binding periplasmic protein [Escherichia coli TW14313]
gi|424518707|ref|ZP_17963131.1| putrescine-binding periplasmic protein [Escherichia coli TW14301]
gi|424524565|ref|ZP_17968579.1| putrescine-binding periplasmic protein [Escherichia coli EC4421]
gi|424530770|ref|ZP_17974385.1| putrescine-binding periplasmic protein [Escherichia coli EC4422]
gi|424536747|ref|ZP_17979997.1| putrescine-binding periplasmic protein [Escherichia coli EC4013]
gi|424542666|ref|ZP_17985464.1| putrescine-binding periplasmic protein [Escherichia coli EC4402]
gi|424548983|ref|ZP_17991173.1| putrescine-binding periplasmic protein [Escherichia coli EC4439]
gi|424555230|ref|ZP_17996943.1| putrescine-binding periplasmic protein [Escherichia coli EC4436]
gi|424561586|ref|ZP_18002866.1| putrescine-binding periplasmic protein [Escherichia coli EC4437]
gi|424567616|ref|ZP_18008520.1| putrescine-binding periplasmic protein [Escherichia coli EC4448]
gi|424573808|ref|ZP_18014218.1| putrescine-binding periplasmic protein [Escherichia coli EC1845]
gi|424579757|ref|ZP_18019678.1| putrescine-binding periplasmic protein [Escherichia coli EC1863]
gi|425096428|ref|ZP_18499441.1| putrescine-binding periplasmic protein [Escherichia coli 3.4870]
gi|425102572|ref|ZP_18505212.1| putrescine-binding periplasmic protein [Escherichia coli 5.2239]
gi|425108377|ref|ZP_18510615.1| bacterial extracellular solute-binding protein [Escherichia coli
6.0172]
gi|425124212|ref|ZP_18525770.1| putrescine-binding periplasmic protein [Escherichia coli 8.0586]
gi|425130241|ref|ZP_18531330.1| putrescine-binding periplasmic protein [Escherichia coli 8.2524]
gi|425136608|ref|ZP_18537322.1| bacterial extracellular solute-binding protein [Escherichia coli
10.0833]
gi|425142447|ref|ZP_18542734.1| putrescine-binding periplasmic protein [Escherichia coli 10.0869]
gi|425148796|ref|ZP_18548673.1| putrescine-binding periplasmic protein [Escherichia coli 88.0221]
gi|425154400|ref|ZP_18553942.1| putrescine-binding periplasmic protein [Escherichia coli PA34]
gi|425160846|ref|ZP_18560017.1| putrescine-binding periplasmic protein [Escherichia coli FDA506]
gi|425166374|ref|ZP_18565175.1| putrescine-binding periplasmic protein [Escherichia coli FDA507]
gi|425172659|ref|ZP_18571048.1| putrescine-binding periplasmic protein [Escherichia coli FDA504]
gi|425178551|ref|ZP_18576593.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1999]
gi|425184697|ref|ZP_18582311.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1997]
gi|425191456|ref|ZP_18588572.1| putrescine-binding periplasmic protein [Escherichia coli NE1487]
gi|425197765|ref|ZP_18594407.1| putrescine-binding periplasmic protein [Escherichia coli NE037]
gi|425204431|ref|ZP_18600551.1| putrescine-binding periplasmic protein [Escherichia coli FRIK2001]
gi|425210183|ref|ZP_18605909.1| bacterial extracellular solute-binding protein [Escherichia coli
PA4]
gi|425216236|ref|ZP_18611541.1| putrescine-binding periplasmic protein [Escherichia coli PA23]
gi|425222818|ref|ZP_18617660.1| putrescine-binding periplasmic protein [Escherichia coli PA49]
gi|425229043|ref|ZP_18623426.1| putrescine-binding periplasmic protein [Escherichia coli PA45]
gi|425235348|ref|ZP_18629302.1| putrescine-binding periplasmic protein [Escherichia coli TT12B]
gi|425241345|ref|ZP_18634973.1| putrescine-binding periplasmic protein [Escherichia coli MA6]
gi|425247471|ref|ZP_18640666.1| putrescine-binding periplasmic protein [Escherichia coli 5905]
gi|425253208|ref|ZP_18646067.1| putrescine-binding periplasmic protein [Escherichia coli CB7326]
gi|425259483|ref|ZP_18651842.1| putrescine-binding periplasmic protein [Escherichia coli EC96038]
gi|425265629|ref|ZP_18657530.1| putrescine-binding periplasmic protein [Escherichia coli 5412]
gi|425293065|ref|ZP_18683633.1| putrescine-binding periplasmic protein [Escherichia coli PA38]
gi|425309798|ref|ZP_18699252.1| putrescine-binding periplasmic protein [Escherichia coli EC1735]
gi|425315720|ref|ZP_18704783.1| putrescine-binding periplasmic protein [Escherichia coli EC1736]
gi|425321786|ref|ZP_18710444.1| putrescine-binding periplasmic protein [Escherichia coli EC1737]
gi|425327978|ref|ZP_18716184.1| putrescine-binding periplasmic protein [Escherichia coli EC1846]
gi|425334164|ref|ZP_18721866.1| putrescine-binding periplasmic protein [Escherichia coli EC1847]
gi|425340576|ref|ZP_18727801.1| putrescine-binding periplasmic protein [Escherichia coli EC1848]
gi|425346443|ref|ZP_18733234.1| putrescine-binding periplasmic protein [Escherichia coli EC1849]
gi|425352679|ref|ZP_18739043.1| putrescine-binding periplasmic protein [Escherichia coli EC1850]
gi|425358668|ref|ZP_18744625.1| putrescine-binding periplasmic protein [Escherichia coli EC1856]
gi|425364782|ref|ZP_18750308.1| putrescine-binding periplasmic protein [Escherichia coli EC1862]
gi|425371229|ref|ZP_18756175.1| putrescine-binding periplasmic protein [Escherichia coli EC1864]
gi|425384022|ref|ZP_18767885.1| putrescine-binding periplasmic protein [Escherichia coli EC1866]
gi|425390712|ref|ZP_18774152.1| putrescine-binding periplasmic protein [Escherichia coli EC1868]
gi|425396831|ref|ZP_18779860.1| putrescine-binding periplasmic protein [Escherichia coli EC1869]
gi|425402818|ref|ZP_18785409.1| putrescine-binding periplasmic protein [Escherichia coli EC1870]
gi|425409356|ref|ZP_18791494.1| putrescine-binding periplasmic protein [Escherichia coli NE098]
gi|425415637|ref|ZP_18797257.1| putrescine-binding periplasmic protein [Escherichia coli FRIK523]
gi|425426770|ref|ZP_18807809.1| putrescine-binding periplasmic protein [Escherichia coli 0.1304]
gi|428945467|ref|ZP_19018081.1| putrescine-binding periplasmic protein [Escherichia coli 88.1467]
gi|428951601|ref|ZP_19023707.1| putrescine-binding periplasmic protein [Escherichia coli 88.1042]
gi|428957463|ref|ZP_19029130.1| putrescine-binding periplasmic protein [Escherichia coli 89.0511]
gi|428963788|ref|ZP_19034949.1| putrescine-binding periplasmic protein [Escherichia coli 90.0091]
gi|428970085|ref|ZP_19040698.1| putrescine-binding periplasmic protein [Escherichia coli 90.0039]
gi|428976320|ref|ZP_19046474.1| putrescine-binding periplasmic protein [Escherichia coli 90.2281]
gi|428982164|ref|ZP_19051881.1| putrescine-binding periplasmic protein [Escherichia coli 93.0055]
gi|428988392|ref|ZP_19057659.1| putrescine-binding periplasmic protein [Escherichia coli 93.0056]
gi|428994192|ref|ZP_19063083.1| putrescine-binding periplasmic protein [Escherichia coli 94.0618]
gi|429000330|ref|ZP_19068816.1| putrescine-binding periplasmic protein [Escherichia coli 95.0183]
gi|429006513|ref|ZP_19074403.1| putrescine-binding periplasmic protein [Escherichia coli 95.1288]
gi|429012847|ref|ZP_19080084.1| putrescine-binding periplasmic protein [Escherichia coli 95.0943]
gi|429019033|ref|ZP_19085798.1| putrescine-binding periplasmic protein [Escherichia coli 96.0428]
gi|429024771|ref|ZP_19091161.1| putrescine-binding periplasmic protein [Escherichia coli 96.0427]
gi|429031104|ref|ZP_19096955.1| putrescine-binding periplasmic protein [Escherichia coli 96.0939]
gi|429037257|ref|ZP_19102681.1| putrescine-binding periplasmic protein [Escherichia coli 96.0932]
gi|429043208|ref|ZP_19108188.1| putrescine-binding periplasmic protein [Escherichia coli 96.0107]
gi|429054348|ref|ZP_19118821.1| putrescine-binding periplasmic protein [Escherichia coli 97.1742]
gi|429059993|ref|ZP_19124125.1| putrescine-binding periplasmic protein [Escherichia coli 97.0007]
gi|429065501|ref|ZP_19129341.1| putrescine-binding periplasmic protein [Escherichia coli 99.0672]
gi|429072024|ref|ZP_19135370.1| bacterial extracellular solute-binding protein [Escherichia coli
99.0678]
gi|429077351|ref|ZP_19140559.1| putrescine-binding periplasmic protein [Escherichia coli 99.0713]
gi|429824593|ref|ZP_19356063.1| putrescine-binding periplasmic protein [Escherichia coli 96.0109]
gi|429830949|ref|ZP_19361762.1| putrescine-binding periplasmic protein [Escherichia coli 97.0010]
gi|444923286|ref|ZP_21242964.1| putrescine-binding periplasmic protein [Escherichia coli
09BKT078844]
gi|444929588|ref|ZP_21248728.1| putrescine-binding periplasmic protein [Escherichia coli 99.0814]
gi|444934879|ref|ZP_21253805.1| putrescine-binding periplasmic protein [Escherichia coli 99.0815]
gi|444940477|ref|ZP_21259112.1| putrescine-binding periplasmic protein [Escherichia coli 99.0816]
gi|444945996|ref|ZP_21264407.1| putrescine-binding periplasmic protein [Escherichia coli 99.0839]
gi|444951622|ref|ZP_21269834.1| putrescine-binding periplasmic protein [Escherichia coli 99.0848]
gi|444957096|ref|ZP_21275083.1| putrescine-binding periplasmic protein [Escherichia coli 99.1753]
gi|444962346|ref|ZP_21280084.1| putrescine-binding periplasmic protein [Escherichia coli 99.1775]
gi|444968098|ref|ZP_21285564.1| putrescine-binding periplasmic protein [Escherichia coli 99.1793]
gi|444973600|ref|ZP_21290868.1| putrescine-binding periplasmic protein [Escherichia coli 99.1805]
gi|444979146|ref|ZP_21296131.1| putrescine-binding periplasmic protein [Escherichia coli ATCC
700728]
gi|444984435|ref|ZP_21301295.1| putrescine-binding periplasmic protein [Escherichia coli PA11]
gi|444989680|ref|ZP_21306411.1| putrescine-binding periplasmic protein [Escherichia coli PA19]
gi|444995028|ref|ZP_21311616.1| putrescine-binding periplasmic protein [Escherichia coli PA13]
gi|445000539|ref|ZP_21316993.1| putrescine-binding periplasmic protein [Escherichia coli PA2]
gi|445005998|ref|ZP_21322328.1| putrescine-binding periplasmic protein [Escherichia coli PA47]
gi|445011109|ref|ZP_21327293.1| putrescine-binding periplasmic protein [Escherichia coli PA48]
gi|445016943|ref|ZP_21332985.1| putrescine-binding periplasmic protein [Escherichia coli PA8]
gi|445022379|ref|ZP_21338293.1| putrescine-binding periplasmic protein [Escherichia coli 7.1982]
gi|445027636|ref|ZP_21343404.1| putrescine-binding periplasmic protein [Escherichia coli 99.1781]
gi|445033139|ref|ZP_21348751.1| putrescine-binding periplasmic protein [Escherichia coli 99.1762]
gi|445038828|ref|ZP_21354290.1| putrescine-binding periplasmic protein [Escherichia coli PA35]
gi|445044128|ref|ZP_21359455.1| putrescine-binding periplasmic protein [Escherichia coli 3.4880]
gi|445049620|ref|ZP_21364776.1| putrescine-binding periplasmic protein [Escherichia coli 95.0083]
gi|445055272|ref|ZP_21370213.1| putrescine-binding periplasmic protein [Escherichia coli 99.0670]
gi|12513869|gb|AAG55230.1|AE005266_9 periplasmic putrescine-binding protein; permease protein
[Escherichia coli O157:H7 str. EDL933]
gi|13360393|dbj|BAB34357.1| periplasmic putrescine-binding permease protein [Escherichia coli
O157:H7 str. Sakai]
gi|187768225|gb|EDU32069.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4196]
gi|188015747|gb|EDU53869.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4113]
gi|189002793|gb|EDU71779.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4076]
gi|189356266|gb|EDU74685.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4401]
gi|189363385|gb|EDU81804.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4486]
gi|189366515|gb|EDU84931.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4501]
gi|189372977|gb|EDU91393.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC869]
gi|189377706|gb|EDU96122.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC508]
gi|208726666|gb|EDZ76267.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4206]
gi|208732663|gb|EDZ81351.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4045]
gi|208738162|gb|EDZ85845.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4042]
gi|209158881|gb|ACI36314.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. EC4115]
gi|209775388|gb|ACI86006.1| periplasmic putrescine-binding permease protein [Escherichia coli]
gi|209775390|gb|ACI86007.1| periplasmic putrescine-binding permease protein [Escherichia coli]
gi|209775392|gb|ACI86008.1| periplasmic putrescine-binding permease protein [Escherichia coli]
gi|209775394|gb|ACI86009.1| periplasmic putrescine-binding permease protein [Escherichia coli]
gi|209775396|gb|ACI86010.1| periplasmic putrescine-binding permease protein [Escherichia coli]
gi|217322739|gb|EEC31163.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli O157:H7 str. TW14588]
gi|254591450|gb|ACT70811.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H7 str. TW14359]
gi|320192665|gb|EFW67306.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli O157:H7 str. EC1212]
gi|320637720|gb|EFX07512.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H7 str. G5101]
gi|320642844|gb|EFX12045.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H- str. 493-89]
gi|320648301|gb|EFX16956.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H- str. H 2687]
gi|320654138|gb|EFX22206.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320659762|gb|EFX27318.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O55:H7 str. USDA 5905]
gi|320664232|gb|EFX31383.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O157:H7 str. LSU-61]
gi|326338256|gb|EGD62085.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli O157:H7 str. 1125]
gi|326346233|gb|EGD69971.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli O157:H7 str. 1044]
gi|374357957|gb|AEZ39664.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O55:H7 str. RM12579]
gi|377899613|gb|EHU63959.1| potF [Escherichia coli DEC3A]
gi|377901563|gb|EHU65879.1| potF [Escherichia coli DEC3B]
gi|377913174|gb|EHU77318.1| potF [Escherichia coli DEC3C]
gi|377917240|gb|EHU81305.1| potF [Escherichia coli DEC3D]
gi|377919920|gb|EHU83954.1| potF [Escherichia coli DEC3E]
gi|377931012|gb|EHU94882.1| potF [Escherichia coli DEC3F]
gi|377933372|gb|EHU97217.1| potF [Escherichia coli DEC4A]
gi|377938272|gb|EHV02040.1| potF [Escherichia coli DEC4B]
gi|377949065|gb|EHV12705.1| potF [Escherichia coli DEC4C]
gi|377950236|gb|EHV13864.1| potF [Escherichia coli DEC4D]
gi|377953808|gb|EHV17372.1| potF [Escherichia coli DEC4E]
gi|377964471|gb|EHV27906.1| potF [Escherichia coli DEC5A]
gi|377966369|gb|EHV29781.1| potF [Escherichia coli DEC4F]
gi|377971052|gb|EHV34409.1| potF [Escherichia coli DEC5B]
gi|377979034|gb|EHV42312.1| potF [Escherichia coli DEC5C]
gi|377979228|gb|EHV42505.1| potF [Escherichia coli DEC5D]
gi|377986533|gb|EHV49723.1| putrescine-binding periplasmic protein [Escherichia coli DEC5E]
gi|386794923|gb|AFJ27957.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli Xuzhou21]
gi|390649846|gb|EIN28318.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1996]
gi|390651735|gb|EIN30005.1| putrescine-binding periplasmic protein [Escherichia coli FDA517]
gi|390652334|gb|EIN30558.1| putrescine-binding periplasmic protein [Escherichia coli FDA505]
gi|390669119|gb|EIN45824.1| putrescine-binding periplasmic protein [Escherichia coli 93-001]
gi|390671954|gb|EIN48323.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1990]
gi|390672408|gb|EIN48710.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1985]
gi|390687857|gb|EIN63002.1| putrescine-binding periplasmic protein [Escherichia coli PA3]
gi|390690748|gb|EIN65534.1| putrescine-binding periplasmic protein [Escherichia coli PA9]
gi|390691427|gb|EIN66175.1| putrescine-binding periplasmic protein [Escherichia coli PA5]
gi|390707547|gb|EIN80891.1| putrescine-binding periplasmic protein [Escherichia coli PA10]
gi|390709358|gb|EIN82468.1| putrescine-binding periplasmic protein [Escherichia coli PA15]
gi|390710585|gb|EIN83603.1| putrescine-binding periplasmic protein [Escherichia coli PA14]
gi|390719497|gb|EIN92222.1| putrescine-binding periplasmic protein [Escherichia coli PA22]
gi|390732637|gb|EIO04322.1| putrescine-binding periplasmic protein [Escherichia coli PA25]
gi|390732735|gb|EIO04413.1| putrescine-binding periplasmic protein [Escherichia coli PA24]
gi|390735312|gb|EIO06706.1| putrescine-binding periplasmic protein [Escherichia coli PA28]
gi|390750969|gb|EIO20945.1| putrescine-binding periplasmic protein [Escherichia coli PA31]
gi|390751331|gb|EIO21246.1| putrescine-binding periplasmic protein [Escherichia coli PA32]
gi|390754208|gb|EIO23830.1| putrescine-binding periplasmic protein [Escherichia coli PA33]
gi|390762025|gb|EIO31295.1| putrescine-binding periplasmic protein [Escherichia coli PA40]
gi|390775337|gb|EIO43404.1| putrescine-binding periplasmic protein [Escherichia coli PA41]
gi|390776898|gb|EIO44777.1| putrescine-binding periplasmic protein [Escherichia coli PA42]
gi|390780850|gb|EIO48540.1| putrescine-binding periplasmic protein [Escherichia coli PA39]
gi|390784876|gb|EIO52432.1| putrescine-binding periplasmic protein [Escherichia coli TW06591]
gi|390794140|gb|EIO61439.1| putrescine-binding periplasmic protein [Escherichia coli TW10246]
gi|390801078|gb|EIO68144.1| putrescine-binding periplasmic protein [Escherichia coli TW11039]
gi|390808183|gb|EIO75029.1| putrescine-binding periplasmic protein [Escherichia coli TW07945]
gi|390811385|gb|EIO78099.1| putrescine-binding periplasmic protein [Escherichia coli TW09109]
gi|390818724|gb|EIO85093.1| putrescine-binding periplasmic protein [Escherichia coli TW10119]
gi|390821550|gb|EIO87733.1| putrescine-binding periplasmic protein [Escherichia coli TW09098]
gi|390836209|gb|EIP00762.1| putrescine-binding periplasmic protein [Escherichia coli EC4203]
gi|390838943|gb|EIP03120.1| putrescine-binding periplasmic protein [Escherichia coli EC4196]
gi|390839560|gb|EIP03661.1| putrescine-binding periplasmic protein [Escherichia coli TW09195]
gi|390854808|gb|EIP17585.1| putrescine-binding periplasmic protein [Escherichia coli TW14301]
gi|390857497|gb|EIP19925.1| putrescine-binding periplasmic protein [Escherichia coli TW14313]
gi|390857924|gb|EIP20345.1| putrescine-binding periplasmic protein [Escherichia coli EC4421]
gi|390870573|gb|EIP32074.1| putrescine-binding periplasmic protein [Escherichia coli EC4422]
gi|390875019|gb|EIP36101.1| putrescine-binding periplasmic protein [Escherichia coli EC4013]
gi|390884737|gb|EIP45010.1| putrescine-binding periplasmic protein [Escherichia coli EC4402]
gi|390887235|gb|EIP47221.1| putrescine-binding periplasmic protein [Escherichia coli EC4439]
gi|390893064|gb|EIP52632.1| putrescine-binding periplasmic protein [Escherichia coli EC4436]
gi|390903518|gb|EIP62564.1| putrescine-binding periplasmic protein [Escherichia coli EC1738]
gi|390908495|gb|EIP67318.1| putrescine-binding periplasmic protein [Escherichia coli EC4437]
gi|390911438|gb|EIP70143.1| putrescine-binding periplasmic protein [Escherichia coli EC1734]
gi|390913492|gb|EIP72078.1| putrescine-binding periplasmic protein [Escherichia coli EC4448]
gi|390924171|gb|EIP81973.1| putrescine-binding periplasmic protein [Escherichia coli EC1863]
gi|390925768|gb|EIP83401.1| putrescine-binding periplasmic protein [Escherichia coli EC1845]
gi|408071679|gb|EKH06014.1| putrescine-binding periplasmic protein [Escherichia coli PA7]
gi|408075796|gb|EKH10028.1| putrescine-binding periplasmic protein [Escherichia coli FRIK920]
gi|408085451|gb|EKH19075.1| putrescine-binding periplasmic protein [Escherichia coli PA34]
gi|408089287|gb|EKH22618.1| putrescine-binding periplasmic protein [Escherichia coli FDA506]
gi|408094081|gb|EKH27126.1| putrescine-binding periplasmic protein [Escherichia coli FDA507]
gi|408101117|gb|EKH33586.1| putrescine-binding periplasmic protein [Escherichia coli FDA504]
gi|408109370|gb|EKH41297.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1999]
gi|408115823|gb|EKH47188.1| putrescine-binding periplasmic protein [Escherichia coli FRIK1997]
gi|408121136|gb|EKH52100.1| putrescine-binding periplasmic protein [Escherichia coli NE1487]
gi|408129305|gb|EKH59538.1| putrescine-binding periplasmic protein [Escherichia coli NE037]
gi|408131027|gb|EKH61088.1| putrescine-binding periplasmic protein [Escherichia coli FRIK2001]
gi|408140179|gb|EKH69714.1| bacterial extracellular solute-binding protein [Escherichia coli
PA4]
gi|408149503|gb|EKH78181.1| putrescine-binding periplasmic protein [Escherichia coli PA23]
gi|408151363|gb|EKH79871.1| putrescine-binding periplasmic protein [Escherichia coli PA49]
gi|408156509|gb|EKH84711.1| putrescine-binding periplasmic protein [Escherichia coli PA45]
gi|408166220|gb|EKH93838.1| putrescine-binding periplasmic protein [Escherichia coli TT12B]
gi|408170931|gb|EKH98081.1| putrescine-binding periplasmic protein [Escherichia coli MA6]
gi|408172925|gb|EKH99977.1| putrescine-binding periplasmic protein [Escherichia coli 5905]
gi|408186208|gb|EKI12315.1| putrescine-binding periplasmic protein [Escherichia coli CB7326]
gi|408190227|gb|EKI15898.1| putrescine-binding periplasmic protein [Escherichia coli 5412]
gi|408190518|gb|EKI16163.1| putrescine-binding periplasmic protein [Escherichia coli EC96038]
gi|408231932|gb|EKI55192.1| putrescine-binding periplasmic protein [Escherichia coli PA38]
gi|408237541|gb|EKI60396.1| putrescine-binding periplasmic protein [Escherichia coli EC1735]
gi|408248449|gb|EKI70498.1| putrescine-binding periplasmic protein [Escherichia coli EC1736]
gi|408252163|gb|EKI73860.1| putrescine-binding periplasmic protein [Escherichia coli EC1737]
gi|408258338|gb|EKI79612.1| putrescine-binding periplasmic protein [Escherichia coli EC1846]
gi|408267294|gb|EKI87758.1| putrescine-binding periplasmic protein [Escherichia coli EC1847]
gi|408268977|gb|EKI89299.1| putrescine-binding periplasmic protein [Escherichia coli EC1848]
gi|408278245|gb|EKI98007.1| putrescine-binding periplasmic protein [Escherichia coli EC1849]
gi|408284083|gb|EKJ03212.1| putrescine-binding periplasmic protein [Escherichia coli EC1850]
gi|408286693|gb|EKJ05612.1| putrescine-binding periplasmic protein [Escherichia coli EC1856]
gi|408299337|gb|EKJ17148.1| putrescine-binding periplasmic protein [Escherichia coli EC1862]
gi|408299613|gb|EKJ17384.1| putrescine-binding periplasmic protein [Escherichia coli EC1864]
gi|408315542|gb|EKJ31857.1| putrescine-binding periplasmic protein [Escherichia coli EC1868]
gi|408315977|gb|EKJ32275.1| putrescine-binding periplasmic protein [Escherichia coli EC1866]
gi|408330518|gb|EKJ45781.1| putrescine-binding periplasmic protein [Escherichia coli EC1869]
gi|408335392|gb|EKJ50238.1| putrescine-binding periplasmic protein [Escherichia coli NE098]
gi|408337053|gb|EKJ51799.1| putrescine-binding periplasmic protein [Escherichia coli EC1870]
gi|408349769|gb|EKJ63691.1| putrescine-binding periplasmic protein [Escherichia coli FRIK523]
gi|408352658|gb|EKJ66202.1| putrescine-binding periplasmic protein [Escherichia coli 0.1304]
gi|408557774|gb|EKK34197.1| putrescine-binding periplasmic protein [Escherichia coli 5.2239]
gi|408558042|gb|EKK34457.1| putrescine-binding periplasmic protein [Escherichia coli 3.4870]
gi|408558495|gb|EKK34859.1| bacterial extracellular solute-binding protein [Escherichia coli
6.0172]
gi|408584608|gb|EKK59608.1| putrescine-binding periplasmic protein [Escherichia coli 8.0586]
gi|408588631|gb|EKK63203.1| putrescine-binding periplasmic protein [Escherichia coli 8.2524]
gi|408589636|gb|EKK64138.1| bacterial extracellular solute-binding protein [Escherichia coli
10.0833]
gi|408603451|gb|EKK77092.1| putrescine-binding periplasmic protein [Escherichia coli 10.0869]
gi|408605201|gb|EKK78730.1| bacterial extracellular solute-binding protein [Escherichia coli
8.0416]
gi|408606704|gb|EKK80130.1| putrescine-binding periplasmic protein [Escherichia coli 88.0221]
gi|408616403|gb|EKK89558.1| putrescine-binding periplasmic protein [Escherichia coli 10.0821]
gi|427213627|gb|EKV83032.1| putrescine-binding periplasmic protein [Escherichia coli 88.1042]
gi|427215477|gb|EKV84659.1| putrescine-binding periplasmic protein [Escherichia coli 89.0511]
gi|427215607|gb|EKV84779.1| putrescine-binding periplasmic protein [Escherichia coli 88.1467]
gi|427232863|gb|EKW00662.1| putrescine-binding periplasmic protein [Escherichia coli 90.2281]
gi|427233218|gb|EKW01004.1| putrescine-binding periplasmic protein [Escherichia coli 90.0039]
gi|427234674|gb|EKW02351.1| putrescine-binding periplasmic protein [Escherichia coli 90.0091]
gi|427250446|gb|EKW17117.1| putrescine-binding periplasmic protein [Escherichia coli 93.0056]
gi|427252048|gb|EKW18570.1| putrescine-binding periplasmic protein [Escherichia coli 93.0055]
gi|427253304|gb|EKW19746.1| putrescine-binding periplasmic protein [Escherichia coli 94.0618]
gi|427269565|gb|EKW34522.1| putrescine-binding periplasmic protein [Escherichia coli 95.0183]
gi|427269724|gb|EKW34676.1| putrescine-binding periplasmic protein [Escherichia coli 95.0943]
gi|427274058|gb|EKW38723.1| putrescine-binding periplasmic protein [Escherichia coli 95.1288]
gi|427285691|gb|EKW49630.1| putrescine-binding periplasmic protein [Escherichia coli 96.0428]
gi|427291178|gb|EKW54622.1| putrescine-binding periplasmic protein [Escherichia coli 96.0427]
gi|427292734|gb|EKW56061.1| putrescine-binding periplasmic protein [Escherichia coli 96.0939]
gi|427305378|gb|EKW67973.1| putrescine-binding periplasmic protein [Escherichia coli 96.0932]
gi|427309436|gb|EKW71754.1| putrescine-binding periplasmic protein [Escherichia coli 96.0107]
gi|427320592|gb|EKW82347.1| putrescine-binding periplasmic protein [Escherichia coli 97.1742]
gi|427321409|gb|EKW83103.1| putrescine-binding periplasmic protein [Escherichia coli 97.0007]
gi|427333243|gb|EKW94353.1| putrescine-binding periplasmic protein [Escherichia coli 99.0713]
gi|427333455|gb|EKW94560.1| bacterial extracellular solute-binding protein [Escherichia coli
99.0678]
gi|427336396|gb|EKW97374.1| putrescine-binding periplasmic protein [Escherichia coli 99.0672]
gi|429259352|gb|EKY43049.1| putrescine-binding periplasmic protein [Escherichia coli 96.0109]
gi|429261409|gb|EKY44854.1| putrescine-binding periplasmic protein [Escherichia coli 97.0010]
gi|444541887|gb|ELV21323.1| putrescine-binding periplasmic protein [Escherichia coli 99.0814]
gi|444549449|gb|ELV27692.1| putrescine-binding periplasmic protein [Escherichia coli
09BKT078844]
gi|444551304|gb|ELV29275.1| putrescine-binding periplasmic protein [Escherichia coli 99.0815]
gi|444564170|gb|ELV41127.1| putrescine-binding periplasmic protein [Escherichia coli 99.0839]
gi|444566023|gb|ELV42861.1| putrescine-binding periplasmic protein [Escherichia coli 99.0816]
gi|444570228|gb|ELV46770.1| putrescine-binding periplasmic protein [Escherichia coli 99.0848]
gi|444581156|gb|ELV57024.1| putrescine-binding periplasmic protein [Escherichia coli 99.1753]
gi|444584205|gb|ELV59856.1| putrescine-binding periplasmic protein [Escherichia coli 99.1775]
gi|444585293|gb|ELV60871.1| putrescine-binding periplasmic protein [Escherichia coli 99.1793]
gi|444598736|gb|ELV73649.1| putrescine-binding periplasmic protein [Escherichia coli ATCC
700728]
gi|444599301|gb|ELV74191.1| putrescine-binding periplasmic protein [Escherichia coli PA11]
gi|444606929|gb|ELV81530.1| putrescine-binding periplasmic protein [Escherichia coli 99.1805]
gi|444613461|gb|ELV87720.1| putrescine-binding periplasmic protein [Escherichia coli PA19]
gi|444613578|gb|ELV87836.1| putrescine-binding periplasmic protein [Escherichia coli PA13]
gi|444621892|gb|ELV95860.1| putrescine-binding periplasmic protein [Escherichia coli PA2]
gi|444631250|gb|ELW04854.1| putrescine-binding periplasmic protein [Escherichia coli PA48]
gi|444631514|gb|ELW05112.1| putrescine-binding periplasmic protein [Escherichia coli PA47]
gi|444636282|gb|ELW09684.1| putrescine-binding periplasmic protein [Escherichia coli PA8]
gi|444646662|gb|ELW19664.1| putrescine-binding periplasmic protein [Escherichia coli 7.1982]
gi|444649330|gb|ELW22231.1| putrescine-binding periplasmic protein [Escherichia coli 99.1781]
gi|444652302|gb|ELW25065.1| putrescine-binding periplasmic protein [Escherichia coli 99.1762]
gi|444661777|gb|ELW34065.1| putrescine-binding periplasmic protein [Escherichia coli PA35]
gi|444665940|gb|ELW38034.1| putrescine-binding periplasmic protein [Escherichia coli 3.4880]
gi|444672019|gb|ELW43779.1| putrescine-binding periplasmic protein [Escherichia coli 95.0083]
gi|444674070|gb|ELW45654.1| putrescine-binding periplasmic protein [Escherichia coli 99.0670]
Length = 370
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|194433166|ref|ZP_03065448.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Shigella dysenteriae 1012]
gi|417672890|ref|ZP_12322349.1| putrescine-binding periplasmic protein [Shigella dysenteriae
155-74]
gi|194418663|gb|EDX34750.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Shigella dysenteriae 1012]
gi|332091100|gb|EGI96190.1| putrescine-binding periplasmic protein [Shigella dysenteriae
155-74]
Length = 370
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|30062336|ref|NP_836507.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Shigella flexneri 2a str. 2457T]
gi|56479743|ref|NP_706734.2| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Shigella flexneri 2a str. 301]
gi|415854716|ref|ZP_11530302.1| putrescine-binding periplasmic protein [Shigella flexneri 2a str.
2457T]
gi|417700887|ref|ZP_12350020.1| putrescine-binding periplasmic protein [Shigella flexneri K-218]
gi|417706478|ref|ZP_12355534.1| putrescine-binding periplasmic protein [Shigella flexneri VA-6]
gi|417716351|ref|ZP_12365280.1| putrescine-binding periplasmic protein [Shigella flexneri K-227]
gi|417721888|ref|ZP_12370729.1| putrescine-binding periplasmic protein [Shigella flexneri K-304]
gi|417727257|ref|ZP_12375998.1| putrescine-binding periplasmic protein [Shigella flexneri K-671]
gi|417732382|ref|ZP_12381051.1| putrescine-binding periplasmic protein [Shigella flexneri 2747-71]
gi|420319367|ref|ZP_14821220.1| putrescine-binding periplasmic protein [Shigella flexneri 2850-71]
gi|420340477|ref|ZP_14842001.1| putrescine-binding periplasmic protein [Shigella flexneri K-404]
gi|30040581|gb|AAP16313.1| periplasmic putrescine-binding protein; permease protein [Shigella
flexneri 2a str. 2457T]
gi|56383294|gb|AAN42441.2| periplasmic putrescine-binding protein; permease protein [Shigella
flexneri 2a str. 301]
gi|313650239|gb|EFS14651.1| putrescine-binding periplasmic protein [Shigella flexneri 2a str.
2457T]
gi|332760493|gb|EGJ90782.1| putrescine-binding periplasmic protein [Shigella flexneri 2747-71]
gi|332763068|gb|EGJ93313.1| putrescine-binding periplasmic protein [Shigella flexneri K-671]
gi|333006656|gb|EGK26155.1| putrescine-binding periplasmic protein [Shigella flexneri VA-6]
gi|333006922|gb|EGK26417.1| putrescine-binding periplasmic protein [Shigella flexneri K-218]
gi|333020148|gb|EGK39418.1| putrescine-binding periplasmic protein [Shigella flexneri K-227]
gi|333020972|gb|EGK40230.1| putrescine-binding periplasmic protein [Shigella flexneri K-304]
gi|391253555|gb|EIQ12728.1| putrescine-binding periplasmic protein [Shigella flexneri 2850-71]
gi|391273034|gb|EIQ31863.1| putrescine-binding periplasmic protein [Shigella flexneri K-404]
Length = 370
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|218548373|ref|YP_002382164.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
fergusonii ATCC 35469]
gi|218355914|emb|CAQ88529.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia fergusonii ATCC 35469]
Length = 370
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|157157062|ref|YP_001462051.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli E24377A]
gi|307311758|ref|ZP_07591398.1| extracellular solute-binding protein family 1 [Escherichia coli W]
gi|378713742|ref|YP_005278635.1| extracellular solute-binding protein [Escherichia coli KO11FL]
gi|386608222|ref|YP_006123708.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli W]
gi|386702331|ref|YP_006166168.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli KO11FL]
gi|386708666|ref|YP_006172387.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli W]
gi|417161332|ref|ZP_11997568.1| putrescine-binding periplasmic protein [Escherichia coli 99.0741]
gi|419369124|ref|ZP_13910250.1| putrescine-binding periplasmic protein [Escherichia coli DEC14A]
gi|419928713|ref|ZP_14446420.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 541-1]
gi|422959017|ref|ZP_16970948.1| putrescine-binding periplasmic protein [Escherichia coli H494]
gi|432764176|ref|ZP_19998624.1| putrescine-binding periplasmic protein [Escherichia coli KTE48]
gi|450212610|ref|ZP_21894582.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O08]
gi|157079092|gb|ABV18800.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli E24377A]
gi|306908313|gb|EFN38812.1| extracellular solute-binding protein family 1 [Escherichia coli W]
gi|315060139|gb|ADT74466.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli W]
gi|323379303|gb|ADX51571.1| extracellular solute-binding protein family 1 [Escherichia coli
KO11FL]
gi|371595673|gb|EHN84521.1| putrescine-binding periplasmic protein [Escherichia coli H494]
gi|378220799|gb|EHX81050.1| putrescine-binding periplasmic protein [Escherichia coli DEC14A]
gi|383393858|gb|AFH18816.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli KO11FL]
gi|383404358|gb|AFH10601.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli W]
gi|386173868|gb|EIH45869.1| putrescine-binding periplasmic protein [Escherichia coli 99.0741]
gi|388405079|gb|EIL65516.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 541-1]
gi|431312755|gb|ELG00744.1| putrescine-binding periplasmic protein [Escherichia coli KTE48]
gi|449321719|gb|EMD11729.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O08]
Length = 370
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWNLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|418254221|ref|ZP_12879118.1| potF [Shigella flexneri 6603-63]
gi|397900578|gb|EJL16937.1| potF [Shigella flexneri 6603-63]
Length = 370
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|420380950|ref|ZP_14880405.1| putrescine-binding periplasmic protein [Shigella dysenteriae
225-75]
gi|391300985|gb|EIQ58888.1| putrescine-binding periplasmic protein [Shigella dysenteriae
225-75]
Length = 370
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|331682363|ref|ZP_08382982.1| putrescine-binding periplasmic protein [Escherichia coli H299]
gi|432390887|ref|ZP_19633745.1| putrescine-binding periplasmic protein [Escherichia coli KTE21]
gi|432615685|ref|ZP_19851812.1| putrescine-binding periplasmic protein [Escherichia coli KTE75]
gi|450186707|ref|ZP_21889625.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily protein [Escherichia coli SEPT362]
gi|331079994|gb|EGI51173.1| putrescine-binding periplasmic protein [Escherichia coli H299]
gi|430921505|gb|ELC42329.1| putrescine-binding periplasmic protein [Escherichia coli KTE21]
gi|431156860|gb|ELE57526.1| putrescine-binding periplasmic protein [Escherichia coli KTE75]
gi|449324226|gb|EMD14163.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily protein [Escherichia coli SEPT362]
Length = 370
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|110641056|ref|YP_668786.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli 536]
gi|191172122|ref|ZP_03033666.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli F11]
gi|191173739|ref|ZP_03035262.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli F11]
gi|215485985|ref|YP_002328416.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O127:H6 str. E2348/69]
gi|218557758|ref|YP_002390671.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli S88]
gi|218688637|ref|YP_002396849.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli ED1a]
gi|306812697|ref|ZP_07446890.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli NC101]
gi|312969079|ref|ZP_07783286.1| putrescine-binding periplasmic protein [Escherichia coli 2362-75]
gi|331656926|ref|ZP_08357888.1| putrescine-binding periplasmic protein [Escherichia coli TA206]
gi|386598572|ref|YP_006100078.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Escherichia coli IHE3034]
gi|386605253|ref|YP_006111553.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli UM146]
gi|387828832|ref|YP_003348769.1| putrescine ABC transporter substrate binding component [Escherichia
coli SE15]
gi|416335114|ref|ZP_11671825.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli WV_060327]
gi|417083350|ref|ZP_11951445.1| putrescine ABC transporter periplasmic substrate-binding protein
[Escherichia coli cloneA_i1]
gi|417288918|ref|ZP_12076203.1| putrescine-binding periplasmic protein [Escherichia coli TW07793]
gi|417661418|ref|ZP_12310999.1| putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli AA86]
gi|417754753|ref|ZP_12402844.1| potF [Escherichia coli DEC2B]
gi|418996071|ref|ZP_13543678.1| potF [Escherichia coli DEC1A]
gi|419001120|ref|ZP_13548671.1| potF [Escherichia coli DEC1B]
gi|419006610|ref|ZP_13554063.1| potF [Escherichia coli DEC1C]
gi|419012454|ref|ZP_13559818.1| putrescine-binding periplasmic protein [Escherichia coli DEC1D]
gi|419017452|ref|ZP_13564771.1| potF [Escherichia coli DEC1E]
gi|419023044|ref|ZP_13570285.1| putrescine-binding periplasmic protein [Escherichia coli DEC2A]
gi|419027912|ref|ZP_13575104.1| potF [Escherichia coli DEC2C]
gi|419033667|ref|ZP_13580763.1| potF [Escherichia coli DEC2D]
gi|419038720|ref|ZP_13585773.1| potF [Escherichia coli DEC2E]
gi|419699706|ref|ZP_14227318.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli SCI-07]
gi|419911703|ref|ZP_14430172.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli KD1]
gi|422748099|ref|ZP_16802012.1| extracellular solute-binding protein [Escherichia coli H252]
gi|422753460|ref|ZP_16807287.1| extracellular solute-binding protein [Escherichia coli H263]
gi|422839317|ref|ZP_16887289.1| putrescine-binding periplasmic protein [Escherichia coli H397]
gi|425299119|ref|ZP_18689161.1| putrescine-binding periplasmic protein [Escherichia coli 07798]
gi|432357183|ref|ZP_19600427.1| putrescine-binding periplasmic protein [Escherichia coli KTE4]
gi|432361610|ref|ZP_19604794.1| putrescine-binding periplasmic protein [Escherichia coli KTE5]
gi|432380477|ref|ZP_19623432.1| putrescine-binding periplasmic protein [Escherichia coli KTE15]
gi|432386304|ref|ZP_19629200.1| putrescine-binding periplasmic protein [Escherichia coli KTE16]
gi|432396738|ref|ZP_19639523.1| putrescine-binding periplasmic protein [Escherichia coli KTE25]
gi|432405670|ref|ZP_19648390.1| putrescine-binding periplasmic protein [Escherichia coli KTE28]
gi|432440215|ref|ZP_19682567.1| putrescine-binding periplasmic protein [Escherichia coli KTE189]
gi|432445345|ref|ZP_19687651.1| putrescine-binding periplasmic protein [Escherichia coli KTE191]
gi|432470222|ref|ZP_19712274.1| putrescine-binding periplasmic protein [Escherichia coli KTE206]
gi|432499066|ref|ZP_19740842.1| putrescine-binding periplasmic protein [Escherichia coli KTE216]
gi|432513092|ref|ZP_19750327.1| putrescine-binding periplasmic protein [Escherichia coli KTE224]
gi|432572832|ref|ZP_19809322.1| putrescine-binding periplasmic protein [Escherichia coli KTE55]
gi|432587092|ref|ZP_19823462.1| putrescine-binding periplasmic protein [Escherichia coli KTE58]
gi|432596733|ref|ZP_19833014.1| putrescine-binding periplasmic protein [Escherichia coli KTE62]
gi|432610523|ref|ZP_19846694.1| putrescine-binding periplasmic protein [Escherichia coli KTE72]
gi|432645281|ref|ZP_19881080.1| putrescine-binding periplasmic protein [Escherichia coli KTE86]
gi|432655119|ref|ZP_19890831.1| putrescine-binding periplasmic protein [Escherichia coli KTE93]
gi|432693606|ref|ZP_19928817.1| putrescine-binding periplasmic protein [Escherichia coli KTE162]
gi|432698204|ref|ZP_19933370.1| putrescine-binding periplasmic protein [Escherichia coli KTE169]
gi|432712512|ref|ZP_19947561.1| putrescine-binding periplasmic protein [Escherichia coli KTE8]
gi|432722365|ref|ZP_19957288.1| putrescine-binding periplasmic protein [Escherichia coli KTE17]
gi|432726953|ref|ZP_19961834.1| putrescine-binding periplasmic protein [Escherichia coli KTE18]
gi|432731563|ref|ZP_19966399.1| putrescine-binding periplasmic protein [Escherichia coli KTE45]
gi|432740639|ref|ZP_19975360.1| putrescine-binding periplasmic protein [Escherichia coli KTE23]
gi|432744824|ref|ZP_19979523.1| putrescine-binding periplasmic protein [Escherichia coli KTE43]
gi|432753591|ref|ZP_19988157.1| putrescine-binding periplasmic protein [Escherichia coli KTE22]
gi|432758641|ref|ZP_19993141.1| putrescine-binding periplasmic protein [Escherichia coli KTE46]
gi|432777731|ref|ZP_20011981.1| putrescine-binding periplasmic protein [Escherichia coli KTE59]
gi|432786519|ref|ZP_20020684.1| putrescine-binding periplasmic protein [Escherichia coli KTE65]
gi|432820111|ref|ZP_20053824.1| putrescine-binding periplasmic protein [Escherichia coli KTE118]
gi|432826327|ref|ZP_20059982.1| putrescine-binding periplasmic protein [Escherichia coli KTE123]
gi|432893590|ref|ZP_20105602.1| putrescine-binding periplasmic protein [Escherichia coli KTE165]
gi|432897785|ref|ZP_20108616.1| putrescine-binding periplasmic protein [Escherichia coli KTE192]
gi|432903437|ref|ZP_20112903.1| putrescine-binding periplasmic protein [Escherichia coli KTE194]
gi|432918076|ref|ZP_20122481.1| putrescine-binding periplasmic protein [Escherichia coli KTE173]
gi|432925366|ref|ZP_20127395.1| putrescine-binding periplasmic protein [Escherichia coli KTE175]
gi|432942903|ref|ZP_20140057.1| putrescine-binding periplasmic protein [Escherichia coli KTE183]
gi|432971009|ref|ZP_20159887.1| putrescine-binding periplasmic protein [Escherichia coli KTE207]
gi|432980327|ref|ZP_20169105.1| putrescine-binding periplasmic protein [Escherichia coli KTE211]
gi|432984481|ref|ZP_20173218.1| putrescine-binding periplasmic protein [Escherichia coli KTE215]
gi|432989952|ref|ZP_20178618.1| putrescine-binding periplasmic protein [Escherichia coli KTE217]
gi|433004319|ref|ZP_20192757.1| putrescine-binding periplasmic protein [Escherichia coli KTE227]
gi|433011574|ref|ZP_20199978.1| putrescine-binding periplasmic protein [Escherichia coli KTE229]
gi|433013071|ref|ZP_20201446.1| putrescine-binding periplasmic protein [Escherichia coli KTE104]
gi|433022713|ref|ZP_20210725.1| putrescine-binding periplasmic protein [Escherichia coli KTE106]
gi|433027879|ref|ZP_20215751.1| putrescine-binding periplasmic protein [Escherichia coli KTE109]
gi|433037892|ref|ZP_20225504.1| putrescine-binding periplasmic protein [Escherichia coli KTE113]
gi|433077013|ref|ZP_20263575.1| putrescine-binding periplasmic protein [Escherichia coli KTE131]
gi|433081779|ref|ZP_20268253.1| putrescine-binding periplasmic protein [Escherichia coli KTE133]
gi|433095749|ref|ZP_20281960.1| putrescine-binding periplasmic protein [Escherichia coli KTE139]
gi|433100363|ref|ZP_20286470.1| putrescine-binding periplasmic protein [Escherichia coli KTE145]
gi|433104959|ref|ZP_20290977.1| putrescine-binding periplasmic protein [Escherichia coli KTE148]
gi|433110174|ref|ZP_20296048.1| putrescine-binding periplasmic protein [Escherichia coli KTE150]
gi|433143474|ref|ZP_20328640.1| putrescine-binding periplasmic protein [Escherichia coli KTE168]
gi|433152944|ref|ZP_20337910.1| putrescine-binding periplasmic protein [Escherichia coli KTE176]
gi|433162689|ref|ZP_20347448.1| putrescine-binding periplasmic protein [Escherichia coli KTE179]
gi|433167698|ref|ZP_20352364.1| putrescine-binding periplasmic protein [Escherichia coli KTE180]
gi|433187638|ref|ZP_20371755.1| putrescine-binding periplasmic protein [Escherichia coli KTE88]
gi|433197462|ref|ZP_20381383.1| putrescine-binding periplasmic protein [Escherichia coli KTE94]
gi|433322318|ref|ZP_20399788.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli J96]
gi|110342648|gb|ABG68885.1| putrescine-binding periplasmic protein precursor [Escherichia coli
536]
gi|190905989|gb|EDV65605.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli F11]
gi|190907649|gb|EDV67244.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli F11]
gi|215264057|emb|CAS08399.1| putrescine transporter subunit PotF: periplasmic-binding component
of ABC superfamily [Escherichia coli O127:H6 str.
E2348/69]
gi|218364527|emb|CAR02209.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli S88]
gi|218426201|emb|CAR07023.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli ED1a]
gi|281177989|dbj|BAI54319.1| putrescine ABC transporter substrate binding component [Escherichia
coli SE15]
gi|294491889|gb|ADE90645.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli IHE3034]
gi|305853460|gb|EFM53899.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli NC101]
gi|307627737|gb|ADN72041.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli UM146]
gi|312286481|gb|EFR14394.1| putrescine-binding periplasmic protein [Escherichia coli 2362-75]
gi|320196651|gb|EFW71274.1| Putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli WV_060327]
gi|323953442|gb|EGB49308.1| extracellular solute-binding protein [Escherichia coli H252]
gi|323958143|gb|EGB53852.1| extracellular solute-binding protein [Escherichia coli H263]
gi|330910636|gb|EGH39146.1| putrescine ABC transporter putrescine-binding protein PotF
[Escherichia coli AA86]
gi|331055174|gb|EGI27183.1| putrescine-binding periplasmic protein [Escherichia coli TA206]
gi|355352766|gb|EHG01940.1| putrescine ABC transporter periplasmic substrate-binding protein
[Escherichia coli cloneA_i1]
gi|371609849|gb|EHN98382.1| putrescine-binding periplasmic protein [Escherichia coli H397]
gi|377848061|gb|EHU13058.1| potF [Escherichia coli DEC1A]
gi|377849686|gb|EHU14655.1| potF [Escherichia coli DEC1C]
gi|377852468|gb|EHU17387.1| potF [Escherichia coli DEC1B]
gi|377862077|gb|EHU26891.1| putrescine-binding periplasmic protein [Escherichia coli DEC1D]
gi|377865908|gb|EHU30698.1| potF [Escherichia coli DEC1E]
gi|377868054|gb|EHU32803.1| putrescine-binding periplasmic protein [Escherichia coli DEC2A]
gi|377878196|gb|EHU42784.1| potF [Escherichia coli DEC2B]
gi|377882844|gb|EHU47375.1| potF [Escherichia coli DEC2D]
gi|377884039|gb|EHU48556.1| potF [Escherichia coli DEC2C]
gi|377897181|gb|EHU61564.1| potF [Escherichia coli DEC2E]
gi|380348812|gb|EIA37088.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli SCI-07]
gi|386247710|gb|EII93883.1| putrescine-binding periplasmic protein [Escherichia coli TW07793]
gi|388393013|gb|EIL54407.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli KD1]
gi|408221062|gb|EKI45045.1| putrescine-binding periplasmic protein [Escherichia coli 07798]
gi|430879049|gb|ELC02406.1| putrescine-binding periplasmic protein [Escherichia coli KTE4]
gi|430889500|gb|ELC12161.1| putrescine-binding periplasmic protein [Escherichia coli KTE5]
gi|430909225|gb|ELC30610.1| putrescine-binding periplasmic protein [Escherichia coli KTE16]
gi|430910792|gb|ELC32092.1| putrescine-binding periplasmic protein [Escherichia coli KTE15]
gi|430917058|gb|ELC38106.1| putrescine-binding periplasmic protein [Escherichia coli KTE25]
gi|430931824|gb|ELC52258.1| putrescine-binding periplasmic protein [Escherichia coli KTE28]
gi|430968941|gb|ELC86109.1| putrescine-binding periplasmic protein [Escherichia coli KTE189]
gi|430975187|gb|ELC92089.1| putrescine-binding periplasmic protein [Escherichia coli KTE191]
gi|430999400|gb|ELD15482.1| putrescine-binding periplasmic protein [Escherichia coli KTE206]
gi|431031737|gb|ELD44475.1| putrescine-binding periplasmic protein [Escherichia coli KTE216]
gi|431044131|gb|ELD54411.1| putrescine-binding periplasmic protein [Escherichia coli KTE224]
gi|431110040|gb|ELE13967.1| putrescine-binding periplasmic protein [Escherichia coli KTE55]
gi|431123259|gb|ELE26001.1| putrescine-binding periplasmic protein [Escherichia coli KTE58]
gi|431132518|gb|ELE34517.1| putrescine-binding periplasmic protein [Escherichia coli KTE62]
gi|431150864|gb|ELE51906.1| putrescine-binding periplasmic protein [Escherichia coli KTE72]
gi|431182512|gb|ELE82329.1| putrescine-binding periplasmic protein [Escherichia coli KTE86]
gi|431194029|gb|ELE93299.1| putrescine-binding periplasmic protein [Escherichia coli KTE93]
gi|431236272|gb|ELF31485.1| putrescine-binding periplasmic protein [Escherichia coli KTE162]
gi|431246344|gb|ELF40610.1| putrescine-binding periplasmic protein [Escherichia coli KTE169]
gi|431258645|gb|ELF51408.1| putrescine-binding periplasmic protein [Escherichia coli KTE8]
gi|431267442|gb|ELF58959.1| putrescine-binding periplasmic protein [Escherichia coli KTE17]
gi|431274741|gb|ELF65786.1| putrescine-binding periplasmic protein [Escherichia coli KTE18]
gi|431277818|gb|ELF68822.1| putrescine-binding periplasmic protein [Escherichia coli KTE45]
gi|431285230|gb|ELF76066.1| putrescine-binding periplasmic protein [Escherichia coli KTE23]
gi|431294300|gb|ELF84480.1| putrescine-binding periplasmic protein [Escherichia coli KTE43]
gi|431304827|gb|ELF93351.1| putrescine-binding periplasmic protein [Escherichia coli KTE22]
gi|431310580|gb|ELF98761.1| putrescine-binding periplasmic protein [Escherichia coli KTE46]
gi|431329920|gb|ELG17205.1| putrescine-binding periplasmic protein [Escherichia coli KTE59]
gi|431341155|gb|ELG28169.1| putrescine-binding periplasmic protein [Escherichia coli KTE65]
gi|431370367|gb|ELG56168.1| putrescine-binding periplasmic protein [Escherichia coli KTE118]
gi|431374111|gb|ELG59706.1| putrescine-binding periplasmic protein [Escherichia coli KTE123]
gi|431424570|gb|ELH06666.1| putrescine-binding periplasmic protein [Escherichia coli KTE165]
gi|431428512|gb|ELH10453.1| putrescine-binding periplasmic protein [Escherichia coli KTE192]
gi|431435881|gb|ELH17489.1| putrescine-binding periplasmic protein [Escherichia coli KTE194]
gi|431446257|gb|ELH27006.1| putrescine-binding periplasmic protein [Escherichia coli KTE173]
gi|431448087|gb|ELH28805.1| putrescine-binding periplasmic protein [Escherichia coli KTE175]
gi|431452790|gb|ELH33201.1| putrescine-binding periplasmic protein [Escherichia coli KTE183]
gi|431486146|gb|ELH65803.1| putrescine-binding periplasmic protein [Escherichia coli KTE207]
gi|431493222|gb|ELH72816.1| putrescine-binding periplasmic protein [Escherichia coli KTE211]
gi|431496827|gb|ELH76405.1| putrescine-binding periplasmic protein [Escherichia coli KTE217]
gi|431505060|gb|ELH83683.1| putrescine-binding periplasmic protein [Escherichia coli KTE215]
gi|431517640|gb|ELH95162.1| putrescine-binding periplasmic protein [Escherichia coli KTE227]
gi|431518189|gb|ELH95709.1| putrescine-binding periplasmic protein [Escherichia coli KTE229]
gi|431534519|gb|ELI11001.1| putrescine-binding periplasmic protein [Escherichia coli KTE104]
gi|431539450|gb|ELI15201.1| putrescine-binding periplasmic protein [Escherichia coli KTE106]
gi|431545260|gb|ELI19920.1| putrescine-binding periplasmic protein [Escherichia coli KTE109]
gi|431554062|gb|ELI27944.1| putrescine-binding periplasmic protein [Escherichia coli KTE113]
gi|431600291|gb|ELI69963.1| putrescine-binding periplasmic protein [Escherichia coli KTE131]
gi|431605614|gb|ELI75003.1| putrescine-binding periplasmic protein [Escherichia coli KTE133]
gi|431619007|gb|ELI87935.1| putrescine-binding periplasmic protein [Escherichia coli KTE139]
gi|431621820|gb|ELI90610.1| putrescine-binding periplasmic protein [Escherichia coli KTE145]
gi|431630810|gb|ELI99138.1| putrescine-binding periplasmic protein [Escherichia coli KTE150]
gi|431633715|gb|ELJ01978.1| putrescine-binding periplasmic protein [Escherichia coli KTE148]
gi|431665576|gb|ELJ32294.1| putrescine-binding periplasmic protein [Escherichia coli KTE168]
gi|431678037|gb|ELJ44049.1| putrescine-binding periplasmic protein [Escherichia coli KTE176]
gi|431691359|gb|ELJ56819.1| putrescine-binding periplasmic protein [Escherichia coli KTE179]
gi|431692960|gb|ELJ58381.1| putrescine-binding periplasmic protein [Escherichia coli KTE180]
gi|431708638|gb|ELJ73146.1| putrescine-binding periplasmic protein [Escherichia coli KTE88]
gi|431724536|gb|ELJ88453.1| putrescine-binding periplasmic protein [Escherichia coli KTE94]
gi|432349036|gb|ELL43477.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli J96]
Length = 370
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|193064481|ref|ZP_03045562.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli E22]
gi|260843105|ref|YP_003220883.1| putrescine transporter subunit PotF [Escherichia coli O103:H2 str.
12009]
gi|417177493|ref|ZP_12006974.1| putrescine-binding periplasmic protein [Escherichia coli 3.2608]
gi|417180250|ref|ZP_12007958.1| putrescine-binding periplasmic protein [Escherichia coli 93.0624]
gi|192928943|gb|EDV82556.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli E22]
gi|257758252|dbj|BAI29749.1| putrescine transporter subunit PotF [Escherichia coli O103:H2 str.
12009]
gi|386176042|gb|EIH53524.1| putrescine-binding periplasmic protein [Escherichia coli 3.2608]
gi|386185605|gb|EIH68331.1| putrescine-binding periplasmic protein [Escherichia coli 93.0624]
Length = 370
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|238795802|ref|ZP_04639315.1| Putrescine-binding periplasmic protein [Yersinia mollaretii ATCC
43969]
gi|238720265|gb|EEQ12068.1| Putrescine-binding periplasmic protein [Yersinia mollaretii ATCC
43969]
Length = 369
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS +Q
Sbjct: 154 APVNSWDLVLKPENLEKLKSCGVSFLDAPSEIFATVLNYLGKDPNS----IQATDYTGPA 209
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
+ L L R F S+ Y+ GD+ VAVGW+ D++ A R NVA +PK
Sbjct: 210 TELLLKLRPNIRYFHSSQYINDLANGDICVAVGWAGDIMQASNRAKEAKNGVNVAYSIPK 269
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+P+ ++
Sbjct: 270 EGALAFFDVFAMPSDAK 286
>gi|389841581|ref|YP_006343665.1| putrescine transporter subunit PotF [Cronobacter sakazakii ES15]
gi|424798972|ref|ZP_18224514.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter sakazakii 696]
gi|429090151|ref|ZP_19152883.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter universalis NCTC 9529]
gi|429109669|ref|ZP_19171439.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter malonaticus 507]
gi|429122224|ref|ZP_19182813.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter sakazakii 680]
gi|387852057|gb|AFK00155.1| putrescine transporter subunit PotF [Cronobacter sakazakii ES15]
gi|423234693|emb|CCK06384.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter sakazakii 696]
gi|426310826|emb|CCJ97552.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter malonaticus 507]
gi|426323276|emb|CCK13550.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter sakazakii 680]
gi|426509954|emb|CCK17995.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter universalis NCTC 9529]
Length = 370
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 17/157 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS+ D +G +
Sbjct: 155 APLNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYSGAATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R N++ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNISYTIPK 270
Query: 125 SGASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH 159
GA + D++A+P A ++ E Q + P + H
Sbjct: 271 EGALAFFDVFAMPADAKNKDEAYQFLNYLMRPDVMAH 307
>gi|415836956|ref|ZP_11519206.1| putrescine-binding periplasmic protein [Escherichia coli RN587/1]
gi|417282938|ref|ZP_12070236.1| putrescine-binding periplasmic protein [Escherichia coli 3003]
gi|425276803|ref|ZP_18668129.1| putrescine-binding periplasmic protein [Escherichia coli ARS4.2123]
gi|323190676|gb|EFZ75945.1| putrescine-binding periplasmic protein [Escherichia coli RN587/1]
gi|386244143|gb|EII85875.1| putrescine-binding periplasmic protein [Escherichia coli 3003]
gi|408206064|gb|EKI30883.1| putrescine-binding periplasmic protein [Escherichia coli ARS4.2123]
Length = 370
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|218704278|ref|YP_002411797.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli UMN026]
gi|293404158|ref|ZP_06648152.1| putrescine transporter subunit protein [Escherichia coli FVEC1412]
gi|293409229|ref|ZP_06652805.1| hypothetical protein ECEG_00160 [Escherichia coli B354]
gi|298379941|ref|ZP_06989546.1| putrescine transporter [Escherichia coli FVEC1302]
gi|331662266|ref|ZP_08363189.1| putrescine-binding periplasmic protein [Escherichia coli TA143]
gi|416896433|ref|ZP_11926280.1| putrescine-binding periplasmic protein [Escherichia coli STEC_7v]
gi|417118740|ref|ZP_11969258.1| putrescine-binding periplasmic protein [Escherichia coli 1.2741]
gi|417137151|ref|ZP_11980941.1| putrescine-binding periplasmic protein [Escherichia coli 97.0259]
gi|417307307|ref|ZP_12094179.1| Putrescine-binding periplasmic protein [Escherichia coli PCN033]
gi|417585791|ref|ZP_12236564.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_C165-02]
gi|419936211|ref|ZP_14453231.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 576-1]
gi|422332326|ref|ZP_16413340.1| putrescine-binding periplasmic protein [Escherichia coli 4_1_47FAA]
gi|422970756|ref|ZP_16974268.1| putrescine-binding periplasmic protein [Escherichia coli TA124]
gi|424815776|ref|ZP_18240927.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia fergusonii ECD227]
gi|432352815|ref|ZP_19596099.1| putrescine-binding periplasmic protein [Escherichia coli KTE2]
gi|432401049|ref|ZP_19643803.1| putrescine-binding periplasmic protein [Escherichia coli KTE26]
gi|432425105|ref|ZP_19667620.1| putrescine-binding periplasmic protein [Escherichia coli KTE181]
gi|432459876|ref|ZP_19702033.1| putrescine-binding periplasmic protein [Escherichia coli KTE204]
gi|432474965|ref|ZP_19716973.1| putrescine-binding periplasmic protein [Escherichia coli KTE208]
gi|432488498|ref|ZP_19730383.1| putrescine-binding periplasmic protein [Escherichia coli KTE213]
gi|432521547|ref|ZP_19758703.1| putrescine-binding periplasmic protein [Escherichia coli KTE228]
gi|432536914|ref|ZP_19773831.1| putrescine-binding periplasmic protein [Escherichia coli KTE235]
gi|432601390|ref|ZP_19837639.1| putrescine-binding periplasmic protein [Escherichia coli KTE66]
gi|432630475|ref|ZP_19866419.1| putrescine-binding periplasmic protein [Escherichia coli KTE80]
gi|432640073|ref|ZP_19875913.1| putrescine-binding periplasmic protein [Escherichia coli KTE83]
gi|432665142|ref|ZP_19900728.1| putrescine-binding periplasmic protein [Escherichia coli KTE116]
gi|432679277|ref|ZP_19914676.1| putrescine-binding periplasmic protein [Escherichia coli KTE143]
gi|432717897|ref|ZP_19952892.1| putrescine-binding periplasmic protein [Escherichia coli KTE9]
gi|432769704|ref|ZP_20004057.1| putrescine-binding periplasmic protein [Escherichia coli KTE50]
gi|432774047|ref|ZP_20008333.1| putrescine-binding periplasmic protein [Escherichia coli KTE54]
gi|432838517|ref|ZP_20072006.1| putrescine-binding periplasmic protein [Escherichia coli KTE140]
gi|432849312|ref|ZP_20080534.1| putrescine-binding periplasmic protein [Escherichia coli KTE144]
gi|432860597|ref|ZP_20085736.1| putrescine-binding periplasmic protein [Escherichia coli KTE146]
gi|432873898|ref|ZP_20093166.1| putrescine-binding periplasmic protein [Escherichia coli KTE147]
gi|432885269|ref|ZP_20099864.1| putrescine-binding periplasmic protein [Escherichia coli KTE158]
gi|432911212|ref|ZP_20117693.1| putrescine-binding periplasmic protein [Escherichia coli KTE190]
gi|432960421|ref|ZP_20150552.1| putrescine-binding periplasmic protein [Escherichia coli KTE202]
gi|433017829|ref|ZP_20206090.1| putrescine-binding periplasmic protein [Escherichia coli KTE105]
gi|433052230|ref|ZP_20239456.1| putrescine-binding periplasmic protein [Escherichia coli KTE122]
gi|433062100|ref|ZP_20249057.1| putrescine-binding periplasmic protein [Escherichia coli KTE125]
gi|433067109|ref|ZP_20253934.1| putrescine-binding periplasmic protein [Escherichia coli KTE128]
gi|433157839|ref|ZP_20342704.1| putrescine-binding periplasmic protein [Escherichia coli KTE177]
gi|433177391|ref|ZP_20361841.1| putrescine-binding periplasmic protein [Escherichia coli KTE82]
gi|433202398|ref|ZP_20386195.1| putrescine-binding periplasmic protein [Escherichia coli KTE95]
gi|218431375|emb|CAR12253.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli UMN026]
gi|291428744|gb|EFF01769.1| putrescine transporter subunit protein [Escherichia coli FVEC1412]
gi|291469697|gb|EFF12181.1| hypothetical protein ECEG_00160 [Escherichia coli B354]
gi|298279639|gb|EFI21147.1| putrescine transporter [Escherichia coli FVEC1302]
gi|325496796|gb|EGC94655.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia fergusonii ECD227]
gi|327253641|gb|EGE65270.1| putrescine-binding periplasmic protein [Escherichia coli STEC_7v]
gi|331060688|gb|EGI32652.1| putrescine-binding periplasmic protein [Escherichia coli TA143]
gi|338771178|gb|EGP25926.1| Putrescine-binding periplasmic protein [Escherichia coli PCN033]
gi|345338947|gb|EGW71373.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_C165-02]
gi|371599786|gb|EHN88566.1| putrescine-binding periplasmic protein [Escherichia coli TA124]
gi|373246637|gb|EHP66089.1| putrescine-binding periplasmic protein [Escherichia coli 4_1_47FAA]
gi|386138274|gb|EIG79434.1| putrescine-binding periplasmic protein [Escherichia coli 1.2741]
gi|386158715|gb|EIH15048.1| putrescine-binding periplasmic protein [Escherichia coli 97.0259]
gi|388401680|gb|EIL62308.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 576-1]
gi|430877743|gb|ELC01177.1| putrescine-binding periplasmic protein [Escherichia coli KTE2]
gi|430927647|gb|ELC48210.1| putrescine-binding periplasmic protein [Escherichia coli KTE26]
gi|430958339|gb|ELC76933.1| putrescine-binding periplasmic protein [Escherichia coli KTE181]
gi|430991159|gb|ELD07575.1| putrescine-binding periplasmic protein [Escherichia coli KTE204]
gi|431008473|gb|ELD23274.1| putrescine-binding periplasmic protein [Escherichia coli KTE208]
gi|431023066|gb|ELD36323.1| putrescine-binding periplasmic protein [Escherichia coli KTE213]
gi|431044611|gb|ELD54883.1| putrescine-binding periplasmic protein [Escherichia coli KTE228]
gi|431072491|gb|ELD80242.1| putrescine-binding periplasmic protein [Escherichia coli KTE235]
gi|431143223|gb|ELE44961.1| putrescine-binding periplasmic protein [Escherichia coli KTE66]
gi|431173510|gb|ELE73586.1| putrescine-binding periplasmic protein [Escherichia coli KTE80]
gi|431184589|gb|ELE84346.1| putrescine-binding periplasmic protein [Escherichia coli KTE83]
gi|431203547|gb|ELF02204.1| putrescine-binding periplasmic protein [Escherichia coli KTE116]
gi|431224337|gb|ELF21564.1| putrescine-binding periplasmic protein [Escherichia coli KTE143]
gi|431265576|gb|ELF57140.1| putrescine-binding periplasmic protein [Escherichia coli KTE9]
gi|431317786|gb|ELG05562.1| putrescine-binding periplasmic protein [Escherichia coli KTE50]
gi|431320045|gb|ELG07697.1| putrescine-binding periplasmic protein [Escherichia coli KTE54]
gi|431390983|gb|ELG74631.1| putrescine-binding periplasmic protein [Escherichia coli KTE140]
gi|431401312|gb|ELG84656.1| putrescine-binding periplasmic protein [Escherichia coli KTE144]
gi|431404493|gb|ELG87744.1| putrescine-binding periplasmic protein [Escherichia coli KTE147]
gi|431407581|gb|ELG90792.1| putrescine-binding periplasmic protein [Escherichia coli KTE146]
gi|431419252|gb|ELH01610.1| putrescine-binding periplasmic protein [Escherichia coli KTE158]
gi|431443928|gb|ELH24953.1| putrescine-binding periplasmic protein [Escherichia coli KTE190]
gi|431478108|gb|ELH57867.1| putrescine-binding periplasmic protein [Escherichia coli KTE202]
gi|431536201|gb|ELI12532.1| putrescine-binding periplasmic protein [Escherichia coli KTE105]
gi|431575006|gb|ELI47763.1| putrescine-binding periplasmic protein [Escherichia coli KTE122]
gi|431587016|gb|ELI58398.1| putrescine-binding periplasmic protein [Escherichia coli KTE125]
gi|431589815|gb|ELI61021.1| putrescine-binding periplasmic protein [Escherichia coli KTE128]
gi|431681215|gb|ELJ47021.1| putrescine-binding periplasmic protein [Escherichia coli KTE177]
gi|431709300|gb|ELJ73770.1| putrescine-binding periplasmic protein [Escherichia coli KTE82]
gi|431725038|gb|ELJ88949.1| putrescine-binding periplasmic protein [Escherichia coli KTE95]
Length = 370
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|383764711|ref|YP_005443693.1| spermidine/putrescine ABC transporter substrate binding protein
[Caldilinea aerophila DSM 14535 = NBRC 104270]
gi|381384979|dbj|BAM01796.1| spermidine/putrescine ABC transporter substrate binding protein
[Caldilinea aerophila DSM 14535 = NBRC 104270]
Length = 380
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 63/120 (52%), Gaps = 7/120 (5%)
Query: 19 EDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALL 77
+ + DLW P AGR+ M++ R +IG+ L +G N+ N +L+ A K LA L
Sbjct: 175 QSFADLWNPAYAGRLVMIDDSRAIIGATLLALGYDVNTTNPAELEEAKVK------LAEL 228
Query: 78 ANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 137
A +LFDS A GDV + + W+ + + A + + + + P GA LW D +AIP
Sbjct: 229 ARGIKLFDSDSPKTALIAGDVDLGIVWTGEAVIAKREVPSFEYIYPTEGAILWQDNYAIP 288
>gi|386618312|ref|YP_006137892.1| Putrescine ABC transporter putrescine-binding protein [Escherichia
coli NA114]
gi|432420929|ref|ZP_19663484.1| putrescine-binding periplasmic protein [Escherichia coli KTE178]
gi|432557835|ref|ZP_19794524.1| putrescine-binding periplasmic protein [Escherichia coli KTE49]
gi|432709652|ref|ZP_19944717.1| putrescine-binding periplasmic protein [Escherichia coli KTE6]
gi|333968813|gb|AEG35618.1| Putrescine ABC transporter putrescine-binding protein [Escherichia
coli NA114]
gi|430946546|gb|ELC66469.1| putrescine-binding periplasmic protein [Escherichia coli KTE178]
gi|431093913|gb|ELD99569.1| putrescine-binding periplasmic protein [Escherichia coli KTE49]
gi|431251354|gb|ELF45371.1| putrescine-binding periplasmic protein [Escherichia coli KTE6]
Length = 370
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|417638181|ref|ZP_12288347.1| putrescine-binding periplasmic protein [Escherichia coli TX1999]
gi|419168841|ref|ZP_13713235.1| putrescine-binding periplasmic protein [Escherichia coli DEC7A]
gi|419179821|ref|ZP_13723444.1| potF [Escherichia coli DEC7C]
gi|419185382|ref|ZP_13728904.1| potF [Escherichia coli DEC7D]
gi|419190576|ref|ZP_13734043.1| putrescine-binding periplasmic protein [Escherichia coli DEC7E]
gi|419864881|ref|ZP_14387276.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O103:H25 str. CVM9340]
gi|420384482|ref|ZP_14883866.1| putrescine-binding periplasmic protein [Escherichia coli EPECa12]
gi|427803967|ref|ZP_18971034.1| periplasmic putrescine-binding protein [Escherichia coli chi7122]
gi|427808553|ref|ZP_18975618.1| periplasmic putrescine-binding protein; permease protein
[Escherichia coli]
gi|433129206|ref|ZP_20314674.1| putrescine-binding periplasmic protein [Escherichia coli KTE163]
gi|433134030|ref|ZP_20319403.1| putrescine-binding periplasmic protein [Escherichia coli KTE166]
gi|443616928|ref|YP_007380784.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli APEC O78]
gi|345395035|gb|EGX24788.1| putrescine-binding periplasmic protein [Escherichia coli TX1999]
gi|378018059|gb|EHV80926.1| putrescine-binding periplasmic protein [Escherichia coli DEC7A]
gi|378027006|gb|EHV89638.1| potF [Escherichia coli DEC7C]
gi|378032800|gb|EHV95381.1| potF [Escherichia coli DEC7D]
gi|378041813|gb|EHW04271.1| putrescine-binding periplasmic protein [Escherichia coli DEC7E]
gi|388338572|gb|EIL05020.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O103:H25 str. CVM9340]
gi|391308840|gb|EIQ66527.1| putrescine-binding periplasmic protein [Escherichia coli EPECa12]
gi|412962149|emb|CCK46063.1| periplasmic putrescine-binding protein [Escherichia coli chi7122]
gi|412968732|emb|CCJ43357.1| periplasmic putrescine-binding protein; permease protein
[Escherichia coli]
gi|431650784|gb|ELJ18095.1| putrescine-binding periplasmic protein [Escherichia coli KTE163]
gi|431661316|gb|ELJ28130.1| putrescine-binding periplasmic protein [Escherichia coli KTE166]
gi|443421436|gb|AGC86340.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli APEC O78]
Length = 370
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|386638205|ref|YP_006105003.1| putrescine-binding periplasmic protein [Escherichia coli ABU 83972]
gi|432410855|ref|ZP_19653536.1| putrescine-binding periplasmic protein [Escherichia coli KTE39]
gi|432430903|ref|ZP_19673346.1| putrescine-binding periplasmic protein [Escherichia coli KTE187]
gi|432435431|ref|ZP_19677830.1| putrescine-binding periplasmic protein [Escherichia coli KTE188]
gi|432455718|ref|ZP_19697917.1| putrescine-binding periplasmic protein [Escherichia coli KTE201]
gi|432494656|ref|ZP_19736472.1| putrescine-binding periplasmic protein [Escherichia coli KTE214]
gi|432503495|ref|ZP_19745230.1| putrescine-binding periplasmic protein [Escherichia coli KTE220]
gi|432522940|ref|ZP_19760077.1| putrescine-binding periplasmic protein [Escherichia coli KTE230]
gi|432567686|ref|ZP_19804211.1| putrescine-binding periplasmic protein [Escherichia coli KTE53]
gi|432591906|ref|ZP_19828233.1| putrescine-binding periplasmic protein [Escherichia coli KTE60]
gi|432606673|ref|ZP_19842866.1| putrescine-binding periplasmic protein [Escherichia coli KTE67]
gi|432650315|ref|ZP_19886075.1| putrescine-binding periplasmic protein [Escherichia coli KTE87]
gi|432782739|ref|ZP_20016923.1| putrescine-binding periplasmic protein [Escherichia coli KTE63]
gi|432843158|ref|ZP_20076493.1| putrescine-binding periplasmic protein [Escherichia coli KTE141]
gi|432994584|ref|ZP_20183198.1| putrescine-binding periplasmic protein [Escherichia coli KTE218]
gi|432999002|ref|ZP_20187540.1| putrescine-binding periplasmic protein [Escherichia coli KTE223]
gi|433057146|ref|ZP_20244229.1| putrescine-binding periplasmic protein [Escherichia coli KTE124]
gi|433114738|ref|ZP_20300552.1| putrescine-binding periplasmic protein [Escherichia coli KTE153]
gi|433124397|ref|ZP_20309984.1| putrescine-binding periplasmic protein [Escherichia coli KTE160]
gi|433138457|ref|ZP_20323741.1| putrescine-binding periplasmic protein [Escherichia coli KTE167]
gi|433148244|ref|ZP_20333308.1| putrescine-binding periplasmic protein [Escherichia coli KTE174]
gi|433206972|ref|ZP_20390667.1| putrescine-binding periplasmic protein [Escherichia coli KTE97]
gi|433211720|ref|ZP_20395333.1| putrescine-binding periplasmic protein [Escherichia coli KTE99]
gi|442606405|ref|ZP_21021205.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Escherichia coli Nissle 1917]
gi|307552697|gb|ADN45472.1| putrescine-binding periplasmic protein precursor [Escherichia coli
ABU 83972]
gi|430937353|gb|ELC57608.1| putrescine-binding periplasmic protein [Escherichia coli KTE39]
gi|430955343|gb|ELC74126.1| putrescine-binding periplasmic protein [Escherichia coli KTE187]
gi|430965759|gb|ELC83168.1| putrescine-binding periplasmic protein [Escherichia coli KTE188]
gi|430984445|gb|ELD01068.1| putrescine-binding periplasmic protein [Escherichia coli KTE201]
gi|431027261|gb|ELD40324.1| putrescine-binding periplasmic protein [Escherichia coli KTE214]
gi|431041541|gb|ELD52041.1| putrescine-binding periplasmic protein [Escherichia coli KTE220]
gi|431054250|gb|ELD63831.1| putrescine-binding periplasmic protein [Escherichia coli KTE230]
gi|431102634|gb|ELE07448.1| putrescine-binding periplasmic protein [Escherichia coli KTE53]
gi|431131822|gb|ELE33838.1| putrescine-binding periplasmic protein [Escherichia coli KTE60]
gi|431140125|gb|ELE41902.1| putrescine-binding periplasmic protein [Escherichia coli KTE67]
gi|431192871|gb|ELE92215.1| putrescine-binding periplasmic protein [Escherichia coli KTE87]
gi|431331138|gb|ELG18401.1| putrescine-binding periplasmic protein [Escherichia coli KTE63]
gi|431396929|gb|ELG80391.1| putrescine-binding periplasmic protein [Escherichia coli KTE141]
gi|431508797|gb|ELH87068.1| putrescine-binding periplasmic protein [Escherichia coli KTE218]
gi|431513342|gb|ELH91425.1| putrescine-binding periplasmic protein [Escherichia coli KTE223]
gi|431573714|gb|ELI46511.1| putrescine-binding periplasmic protein [Escherichia coli KTE124]
gi|431636448|gb|ELJ04579.1| putrescine-binding periplasmic protein [Escherichia coli KTE153]
gi|431649204|gb|ELJ16563.1| putrescine-binding periplasmic protein [Escherichia coli KTE160]
gi|431664635|gb|ELJ31369.1| putrescine-binding periplasmic protein [Escherichia coli KTE167]
gi|431676357|gb|ELJ42477.1| putrescine-binding periplasmic protein [Escherichia coli KTE174]
gi|431732188|gb|ELJ95644.1| putrescine-binding periplasmic protein [Escherichia coli KTE97]
gi|431735918|gb|ELJ99262.1| putrescine-binding periplasmic protein [Escherichia coli KTE99]
gi|441712481|emb|CCQ07182.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Escherichia coli Nissle 1917]
Length = 370
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|425304379|ref|ZP_18694159.1| putrescine-binding periplasmic protein [Escherichia coli N1]
gi|408231148|gb|EKI54444.1| putrescine-binding periplasmic protein [Escherichia coli N1]
Length = 370
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|417230223|ref|ZP_12031809.1| putrescine-binding periplasmic protein [Escherichia coli 5.0959]
gi|386206713|gb|EII11219.1| putrescine-binding periplasmic protein [Escherichia coli 5.0959]
Length = 370
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|387611396|ref|YP_006114512.1| putrescine ABC transporter, substrate-binding protein [Escherichia
coli ETEC H10407]
gi|404374179|ref|ZP_10979398.1| putrescine-binding periplasmic protein [Escherichia sp. 1_1_43]
gi|432368912|ref|ZP_19612013.1| putrescine-binding periplasmic protein [Escherichia coli KTE10]
gi|432484548|ref|ZP_19726468.1| putrescine-binding periplasmic protein [Escherichia coli KTE212]
gi|432669800|ref|ZP_19905340.1| putrescine-binding periplasmic protein [Escherichia coli KTE119]
gi|432880589|ref|ZP_20097124.1| putrescine-binding periplasmic protein [Escherichia coli KTE154]
gi|433172684|ref|ZP_20357237.1| putrescine-binding periplasmic protein [Escherichia coli KTE232]
gi|309701132|emb|CBJ00430.1| putrescine ABC transporter, substrate-binding protein [Escherichia
coli ETEC H10407]
gi|404292237|gb|EJZ49066.1| putrescine-binding periplasmic protein [Escherichia sp. 1_1_43]
gi|430888124|gb|ELC10847.1| putrescine-binding periplasmic protein [Escherichia coli KTE10]
gi|431017699|gb|ELD31154.1| putrescine-binding periplasmic protein [Escherichia coli KTE212]
gi|431212330|gb|ELF10257.1| putrescine-binding periplasmic protein [Escherichia coli KTE119]
gi|431412817|gb|ELG95616.1| putrescine-binding periplasmic protein [Escherichia coli KTE154]
gi|431695675|gb|ELJ60977.1| putrescine-binding periplasmic protein [Escherichia coli KTE232]
Length = 370
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|398865909|ref|ZP_10621415.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM78]
gi|398242096|gb|EJN27723.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM78]
Length = 362
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 67/134 (50%), Gaps = 20/134 (14%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKI-SV 70
I+ W L+ PE + +SM++S EV +VL YMG S N D + A K+ S+
Sbjct: 150 IDSWAVLFEPENIKKLSQCGVSMMDSADEVFPAVLNYMGMDPRSENPEDFKKAEAKLLSI 209
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
+ + F S+ Y+ GD+ VA G+S DV A R N+A +PK
Sbjct: 210 RPYITY-------FHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEARNGVNIAYAIPK 262
Query: 125 SGASLWADLWAIPA 138
G++LW DL AIPA
Sbjct: 263 EGSNLWFDLLAIPA 276
>gi|417665994|ref|ZP_12315556.1| putrescine-binding periplasmic protein [Escherichia coli STEC_O31]
gi|397786545|gb|EJK97381.1| putrescine-binding periplasmic protein [Escherichia coli STEC_O31]
Length = 370
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|339006887|ref|ZP_08639462.1| spermidine/putrescine-binding periplasmic protein [Brevibacillus
laterosporus LMG 15441]
gi|421873293|ref|ZP_16304907.1| bacterial extracellular solute-binding family protein
[Brevibacillus laterosporus GI-9]
gi|338776096|gb|EGP35624.1| spermidine/putrescine-binding periplasmic protein [Brevibacillus
laterosporus LMG 15441]
gi|372457619|emb|CCF14456.1| bacterial extracellular solute-binding family protein
[Brevibacillus laterosporus GI-9]
Length = 349
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 106/247 (42%), Gaps = 43/247 (17%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNS-NNIDL 61
IAY K K+ P W DLW P+ GR+ ++N RE +G LK G S ++ + +L
Sbjct: 138 IAYNK----KYVTEPPTSWSDLWNPKYKGRVVVLNDSREALGMSLKKNGFSNSTISEKEL 193
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+A + LL N FD+ + F + W+ WS D +++ V
Sbjct: 194 DIANADLK-----KLLPN-LLAFDTDTIKQKFIAEEAWIGTVWSGDAAFIYPENNDIGYV 247
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
VPK G +++AD +AIP ++ + L ++I + + P
Sbjct: 248 VPKEGGTIFADTFAIPKGAKHKK------------LAEEFINYMMD------------PA 283
Query: 182 ASPSALETTLVKLPEELLKGKPSQD----TNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
S ET P E K P N ++ + P E ++R E+L+ + E TL Y+
Sbjct: 284 VSVKNYETIGYSNPNE--KAHPLHSEKYRNNKMIFLSPEE-MSRTEWLKDVGE-TLQVYD 339
Query: 238 WLVADLQ 244
L +L+
Sbjct: 340 RLWTELK 346
>gi|387606407|ref|YP_006095263.1| putrescine ABC transporter, substrate-binding protein [Escherichia
coli 042]
gi|284920707|emb|CBG33770.1| putrescine ABC transporter, substrate-binding protein [Escherichia
coli 042]
Length = 370
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|194428217|ref|ZP_03060760.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli B171]
gi|415803209|ref|ZP_11500357.1| putrescine-binding periplasmic protein [Escherichia coli E128010]
gi|417622217|ref|ZP_12272541.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_H.1.8]
gi|419310481|ref|ZP_13852352.1| putrescine-binding periplasmic protein [Escherichia coli DEC11E]
gi|419315769|ref|ZP_13857593.1| putrescine-binding periplasmic protein [Escherichia coli DEC12A]
gi|419321715|ref|ZP_13863447.1| potF [Escherichia coli DEC12B]
gi|419327845|ref|ZP_13869473.1| putrescine-binding periplasmic protein [Escherichia coli DEC12C]
gi|419333369|ref|ZP_13874924.1| potF [Escherichia coli DEC12D]
gi|419338686|ref|ZP_13880171.1| potF [Escherichia coli DEC12E]
gi|194413777|gb|EDX30056.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli B171]
gi|323159676|gb|EFZ45655.1| putrescine-binding periplasmic protein [Escherichia coli E128010]
gi|345385041|gb|EGX14891.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_H.1.8]
gi|378160196|gb|EHX21193.1| putrescine-binding periplasmic protein [Escherichia coli DEC11E]
gi|378173150|gb|EHX33994.1| potF [Escherichia coli DEC12B]
gi|378173861|gb|EHX34694.1| putrescine-binding periplasmic protein [Escherichia coli DEC12A]
gi|378175304|gb|EHX36122.1| putrescine-binding periplasmic protein [Escherichia coli DEC12C]
gi|378188605|gb|EHX49201.1| potF [Escherichia coli DEC12D]
gi|378193209|gb|EHX53750.1| potF [Escherichia coli DEC12E]
Length = 370
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|432801133|ref|ZP_20035118.1| putrescine-binding periplasmic protein [Escherichia coli KTE84]
gi|431350368|gb|ELG37180.1| putrescine-binding periplasmic protein [Escherichia coli KTE84]
Length = 370
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEGKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|82776067|ref|YP_402414.1| putrescine ABC transporter periplasmic-binding protein [Shigella
dysenteriae Sd197]
gi|309786474|ref|ZP_07681098.1| putrescine-binding periplasmic protein [Shigella dysenteriae 1617]
gi|81240215|gb|ABB60925.1| periplasmic putrescine-binding protein [Shigella dysenteriae Sd197]
gi|308925662|gb|EFP71145.1| putrescine-binding periplasmic protein [Shigella dysenteriae 1617]
Length = 370
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEANNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|398873539|ref|ZP_10628794.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM74]
gi|398199204|gb|EJM86149.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM74]
Length = 362
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 64/133 (48%), Gaps = 18/133 (13%)
Query: 18 IEDWKDLWRPE-----LAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W L+ PE A +SM++S EV ++L YMG S N D + A K
Sbjct: 150 IDSWAVLFEPENIKKLSACGVSMMDSADEVFPAMLNYMGMDPRSENPEDFKKAEAK---- 205
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
L + F S+ Y+ GD+ VA G+S DV A R N+A +PK
Sbjct: 206 --LLQIRPYITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEANNGVNIAYAIPKE 263
Query: 126 GASLWADLWAIPA 138
GA+LW DL AIPA
Sbjct: 264 GANLWFDLLAIPA 276
>gi|386613073|ref|YP_006132739.1| putrescine-binding periplasmic protein PotF [Escherichia coli
UMNK88]
gi|332342242|gb|AEE55576.1| putrescine-binding periplasmic protein PotF [Escherichia coli
UMNK88]
Length = 370
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|271500855|ref|YP_003333880.1| family 1 extracellular solute-binding protein [Dickeya dadantii
Ech586]
gi|270344410|gb|ACZ77175.1| extracellular solute-binding protein family 1 [Dickeya dadantii
Ech586]
Length = 369
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 40/218 (18%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y G + NS N + K +
Sbjct: 154 APVNSWDLVLKPENLEKLKSCGVSFLDAPAEIYATVLNYQGKNPNSTN---ESDYTKDAT 210
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L N R F S+ Y+ GD+ VA+GW+ DV+ A R N++ +PK
Sbjct: 211 DLLLKLRPN-IRYFHSSQYINDLANGDICVAIGWAGDVMQAANRAKEAKNGVNISYSIPK 269
Query: 125 SGASLWADLWAIPA-ASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGAS 183
GA + D++AIP A L++ +Q++ + L K EVI S
Sbjct: 270 EGALAFFDVFAIPKDAKNLDSA-------------YQFLNYLL--------KPEVIANIS 308
Query: 184 PSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILAR 221
K L+K + N+ PPA+I A+
Sbjct: 309 NHVYYANPNKEATALVKDDVRNNPNI---YPPADIRAK 343
>gi|170769001|ref|ZP_02903454.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia albertii TW07627]
gi|170122073|gb|EDS91004.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia albertii TW07627]
Length = 370
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|157160376|ref|YP_001457694.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli HS]
gi|170020743|ref|YP_001725697.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli ATCC 8739]
gi|193069329|ref|ZP_03050284.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli E110019]
gi|194438393|ref|ZP_03070483.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli 101-1]
gi|251784398|ref|YP_002998702.1| potF, subunit of putrescine ABC transporter [Escherichia coli
BL21(DE3)]
gi|253774116|ref|YP_003036947.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254160969|ref|YP_003044077.1| putrescine transporter subunit periplasmic-binding component of ABC
superfamily [Escherichia coli B str. REL606]
gi|254287777|ref|YP_003053525.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli BL21(DE3)]
gi|293414132|ref|ZP_06656781.1| hypothetical protein ECDG_00683 [Escherichia coli B185]
gi|312970978|ref|ZP_07785157.1| putrescine-binding periplasmic protein [Escherichia coli 1827-70]
gi|417120464|ref|ZP_11970022.1| putrescine-binding periplasmic protein [Escherichia coli 97.0246]
gi|417627783|ref|ZP_12278030.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_MHI813]
gi|417690217|ref|ZP_12339441.1| putrescine-binding periplasmic protein [Shigella boydii 5216-82]
gi|421776936|ref|ZP_16213537.1| bacterial extracellular solute-binding protein [Escherichia coli
AD30]
gi|422835645|ref|ZP_16883698.1| putrescine-binding periplasmic protein [Escherichia coli E101]
gi|425287734|ref|ZP_18678640.1| putrescine-binding periplasmic protein [Escherichia coli 3006]
gi|432453610|ref|ZP_19695847.1| putrescine-binding periplasmic protein [Escherichia coli KTE193]
gi|432530189|ref|ZP_19767229.1| putrescine-binding periplasmic protein [Escherichia coli KTE233]
gi|432542240|ref|ZP_19779096.1| putrescine-binding periplasmic protein [Escherichia coli KTE236]
gi|432547710|ref|ZP_19784497.1| putrescine-binding periplasmic protein [Escherichia coli KTE237]
gi|432620994|ref|ZP_19857035.1| putrescine-binding periplasmic protein [Escherichia coli KTE76]
gi|432673850|ref|ZP_19909339.1| putrescine-binding periplasmic protein [Escherichia coli KTE142]
gi|432814491|ref|ZP_20048281.1| putrescine-binding periplasmic protein [Escherichia coli KTE115]
gi|433032350|ref|ZP_20220124.1| putrescine-binding periplasmic protein [Escherichia coli KTE112]
gi|442599401|ref|ZP_21017119.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|157066056|gb|ABV05311.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli HS]
gi|169755671|gb|ACA78370.1| extracellular solute-binding protein family 1 [Escherichia coli
ATCC 8739]
gi|192957282|gb|EDV87730.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli E110019]
gi|194422617|gb|EDX38614.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Escherichia coli 101-1]
gi|242376671|emb|CAQ31382.1| potF, subunit of putrescine ABC transporter [Escherichia coli
BL21(DE3)]
gi|253325160|gb|ACT29762.1| extracellular solute-binding protein family 1 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253972870|gb|ACT38541.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli B str. REL606]
gi|253977084|gb|ACT42754.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli BL21(DE3)]
gi|291434190|gb|EFF07163.1| hypothetical protein ECDG_00683 [Escherichia coli B185]
gi|310336739|gb|EFQ01906.1| putrescine-binding periplasmic protein [Escherichia coli 1827-70]
gi|332088887|gb|EGI93999.1| putrescine-binding periplasmic protein [Shigella boydii 5216-82]
gi|345378087|gb|EGX10018.1| putrescine-binding periplasmic protein [Escherichia coli
STEC_MHI813]
gi|371611824|gb|EHO00343.1| putrescine-binding periplasmic protein [Escherichia coli E101]
gi|386149119|gb|EIG95551.1| putrescine-binding periplasmic protein [Escherichia coli 97.0246]
gi|408216953|gb|EKI41240.1| putrescine-binding periplasmic protein [Escherichia coli 3006]
gi|408458050|gb|EKJ81840.1| bacterial extracellular solute-binding protein [Escherichia coli
AD30]
gi|430973749|gb|ELC90694.1| putrescine-binding periplasmic protein [Escherichia coli KTE193]
gi|431056563|gb|ELD66064.1| putrescine-binding periplasmic protein [Escherichia coli KTE233]
gi|431076494|gb|ELD83989.1| putrescine-binding periplasmic protein [Escherichia coli KTE236]
gi|431083646|gb|ELD89818.1| putrescine-binding periplasmic protein [Escherichia coli KTE237]
gi|431161460|gb|ELE61931.1| putrescine-binding periplasmic protein [Escherichia coli KTE76]
gi|431217224|gb|ELF14804.1| putrescine-binding periplasmic protein [Escherichia coli KTE142]
gi|431366714|gb|ELG53211.1| putrescine-binding periplasmic protein [Escherichia coli KTE115]
gi|431558736|gb|ELI32345.1| putrescine-binding periplasmic protein [Escherichia coli KTE112]
gi|441651671|emb|CCQ02616.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
Length = 370
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|432579551|ref|ZP_19815982.1| putrescine-binding periplasmic protein [Escherichia coli KTE56]
gi|431107541|gb|ELE11706.1| putrescine-binding periplasmic protein [Escherichia coli KTE56]
Length = 370
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|429333574|ref|ZP_19214268.1| extracellular solute-binding protein [Pseudomonas putida CSV86]
gi|428761774|gb|EKX83994.1| extracellular solute-binding protein [Pseudomonas putida CSV86]
Length = 361
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 16/135 (11%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
I+ W L+ PE + ++ ++S E+I S+L Y+G NS+N A ++
Sbjct: 149 IDSWATLYEPENLKKLQQCGVAFMDSADELIPSILNYLGLDPNSSN-----AADYAKAEK 203
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSG 126
L L F S+ Y+ GD+ VA G+S DVL A R +A +PK G
Sbjct: 204 RLLELRPYVTYFHSSKYISDLANGDICVAFGFSGDVLQAANRAREAGNGVKIAYSIPKEG 263
Query: 127 ASLWADLWAIPAASR 141
++LW DL AIPA ++
Sbjct: 264 SNLWFDLIAIPADAK 278
>gi|416288836|ref|ZP_11649363.1| Putrescine ABC transporter putrescine-binding protein PotF
[Shigella boydii ATCC 9905]
gi|320177812|gb|EFW52798.1| Putrescine ABC transporter putrescine-binding protein PotF
[Shigella boydii ATCC 9905]
Length = 358
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|403068806|ref|ZP_10910138.1| spermidine:putrescine ABC transporter [Oceanobacillus sp. Ndiop]
Length = 358
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 98/225 (43%), Gaps = 34/225 (15%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID-LQVAGGKI-SVQQNL- 74
I + DLW PEL +I +++ RE++G L +G S N + D LQ A K+ + N+
Sbjct: 156 ITGFNDLWDPELENKILLIDGAREILGMGLNSLGYSLNDTDEDHLQEALTKLKELTPNVK 215
Query: 75 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 134
A++ ++ ++ + + +AVGWS D + N+ VVP+ G++LW D +
Sbjct: 216 AIVGDENKMLMENN--------EAAIAVGWSGDARDIMWENENIDYVVPEEGSNLWFDNF 267
Query: 135 AIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKL 194
IP ++ HQ+I F L A E + ++P+
Sbjct: 268 VIPKTAQ------------NVDAAHQFINFMLDPEVAAQ-NTEYVSYSTPN--------- 305
Query: 195 PEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
+E LK P N P E+ R E E L + L+ Y L
Sbjct: 306 -KEALKYMPEDMVNDERFYPEPELTERLEVYENLGKQHLAYYNEL 349
>gi|260854146|ref|YP_003228037.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O26:H11 str. 11368]
gi|415785124|ref|ZP_11492761.1| putrescine-binding periplasmic protein [Escherichia coli EPECa14]
gi|417295212|ref|ZP_12082468.1| putrescine-binding periplasmic protein [Escherichia coli 900105
(10e)]
gi|419208005|ref|ZP_13751128.1| potF [Escherichia coli DEC8C]
gi|419214551|ref|ZP_13757573.1| potF [Escherichia coli DEC8D]
gi|419220151|ref|ZP_13763103.1| potF [Escherichia coli DEC8E]
gi|419225642|ref|ZP_13768525.1| potF [Escherichia coli DEC9A]
gi|419231629|ref|ZP_13774417.1| potF [Escherichia coli DEC9B]
gi|419236828|ref|ZP_13779571.1| potF [Escherichia coli DEC9C]
gi|419242358|ref|ZP_13785005.1| potF [Escherichia coli DEC9D]
gi|419247875|ref|ZP_13790482.1| potF [Escherichia coli DEC9E]
gi|419253613|ref|ZP_13796152.1| potF [Escherichia coli DEC10A]
gi|419259675|ref|ZP_13802119.1| potF [Escherichia coli DEC10B]
gi|419265753|ref|ZP_13808134.1| potF [Escherichia coli DEC10C]
gi|419271357|ref|ZP_13813681.1| potF [Escherichia coli DEC10D]
gi|419282843|ref|ZP_13825054.1| potF [Escherichia coli DEC10F]
gi|419874556|ref|ZP_14396479.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9534]
gi|419885475|ref|ZP_14406218.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9545]
gi|419902683|ref|ZP_14421875.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM9942]
gi|419909554|ref|ZP_14428111.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O26:H11 str. CVM10026]
gi|420105546|ref|ZP_14616016.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9455]
gi|420111561|ref|ZP_14621389.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9553]
gi|420117654|ref|ZP_14627009.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM10021]
gi|420124077|ref|ZP_14632947.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM10030]
gi|420129649|ref|ZP_14638175.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM10224]
gi|420133082|ref|ZP_14641352.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM9952]
gi|424747221|ref|ZP_18175418.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424755887|ref|ZP_18183731.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str.
CFSAN001630]
gi|425377764|ref|ZP_18762130.1| putrescine-binding periplasmic protein [Escherichia coli EC1865]
gi|257752795|dbj|BAI24297.1| putrescine transporter subunit PotF [Escherichia coli O26:H11 str.
11368]
gi|323155772|gb|EFZ41941.1| putrescine-binding periplasmic protein [Escherichia coli EPECa14]
gi|378061179|gb|EHW23365.1| potF [Escherichia coli DEC8C]
gi|378066804|gb|EHW28932.1| potF [Escherichia coli DEC8D]
gi|378071385|gb|EHW33455.1| potF [Escherichia coli DEC8E]
gi|378080011|gb|EHW41977.1| potF [Escherichia coli DEC9A]
gi|378081347|gb|EHW43302.1| potF [Escherichia coli DEC9B]
gi|378087691|gb|EHW49547.1| potF [Escherichia coli DEC9C]
gi|378093709|gb|EHW55513.1| potF [Escherichia coli DEC9D]
gi|378100040|gb|EHW61737.1| potF [Escherichia coli DEC9E]
gi|378105153|gb|EHW66800.1| potF [Escherichia coli DEC10A]
gi|378114455|gb|EHW76011.1| potF [Escherichia coli DEC10B]
gi|378117332|gb|EHW78848.1| potF [Escherichia coli DEC10C]
gi|378120888|gb|EHW82350.1| potF [Escherichia coli DEC10D]
gi|378138045|gb|EHW99306.1| potF [Escherichia coli DEC10F]
gi|386261575|gb|EIJ17040.1| putrescine-binding periplasmic protein [Escherichia coli 900105
(10e)]
gi|388349802|gb|EIL15254.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9545]
gi|388350747|gb|EIL16075.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9534]
gi|388372924|gb|EIL36301.1| putrescine ABC transporter periplasmic-binding protein [Escherichia
coli O26:H11 str. CVM10026]
gi|388373469|gb|EIL36739.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM9942]
gi|394381956|gb|EJE59609.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM10224]
gi|394395831|gb|EJE72224.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9455]
gi|394398150|gb|EJE74350.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str. CVM9553]
gi|394401884|gb|EJE77653.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM10021]
gi|394415718|gb|EJE89562.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM10030]
gi|394426734|gb|EJE99527.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str. CVM9952]
gi|408308734|gb|EKJ25967.1| putrescine-binding periplasmic protein [Escherichia coli EC1865]
gi|421946651|gb|EKU03767.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O26:H11 str.
CFSAN001629]
gi|421949939|gb|EKU06844.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H11 str.
CFSAN001630]
Length = 370
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|374336217|ref|YP_005092904.1| putrescine ABC transporter periplasmic-binding protein [Oceanimonas
sp. GK1]
gi|372985904|gb|AEY02154.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Oceanimonas sp. GK1]
Length = 368
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 17/138 (12%)
Query: 16 APIEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKIS 69
AP++ W + +PE ++S +++P E+ + L Y G NS N D ++
Sbjct: 153 APVDSWDLVMKPENLAKLSQCGVAFLDAPTEIFAAALNYQGLDPNSTNASDYNGPATELM 212
Query: 70 VQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVP 123
+Q L F S+ Y+ GD+ VAVGWS D+L A R VA +P
Sbjct: 213 MQ-----LRPHITYFHSSKYINDLANGDICVAVGWSGDILQARDRADEAERGVKVAYRIP 267
Query: 124 KSGASLWADLWAIPAASR 141
K GA +W D+ IP +R
Sbjct: 268 KEGALMWVDMLTIPKDAR 285
>gi|338738412|ref|YP_004675374.1| putrescine ABC transporter periplasmic-binding protein
[Hyphomicrobium sp. MC1]
gi|337758975|emb|CCB64800.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Hyphomicrobium sp. MC1]
Length = 372
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 19/152 (12%)
Query: 3 IAYKKSKFRKHNL-APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNS 56
+ Y + K ++ AP+ +++PE+A + I M++SP ++I L Y+G N+
Sbjct: 144 VGYNEGKIKERMADAPVNSLDMIFKPEIAAKFKDCGIYMLDSPEDIIPVALNYLGLDPNT 203
Query: 57 NN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM 115
N D Q V+ L + + F S+ Y+ A GD +A+GWS D+L A R
Sbjct: 204 KNPEDFQ------KVEDMLLKIRPYIKKFHSSEYINALANGDACMALGWSGDILQAASRA 257
Query: 116 SN------VAVVVPKSGASLWADLWAIPAASR 141
+ +PK G +W D+ AIPA ++
Sbjct: 258 EEAKNGQVIKYNIPKEGTQMWFDMMAIPADAK 289
>gi|238893913|ref|YP_002918647.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|238546229|dbj|BAH62580.1| spermidine/putrescine transport system periplasmic
substrate-binding component [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
Length = 376
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 161 APVDSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL 219
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 220 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPK 276
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 277 EGALAFFDVFAMPADAK 293
>gi|366159061|ref|ZP_09458923.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia sp. TW09308]
gi|432371595|ref|ZP_19614648.1| putrescine-binding periplasmic protein [Escherichia coli KTE11]
gi|430899033|gb|ELC21139.1| putrescine-binding periplasmic protein [Escherichia coli KTE11]
Length = 370
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|423128300|ref|ZP_17115979.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5250]
gi|376393656|gb|EHT06312.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5250]
Length = 370
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 82/179 (45%), Gaps = 19/179 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 155 APLDSWDLVMKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPK 270
Query: 125 SGASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH--QWIEFCLQTARALPFKQEVI 179
GA + D++A+P A ++ E Q + P + H + + +LP E I
Sbjct: 271 EGALAFFDVFAMPADAKNKDEAYQFLNYLMRPDVIAHISDHVYYANGNKASLPLVSEEI 329
>gi|365139255|ref|ZP_09345724.1| putrescine-binding periplasmic protein [Klebsiella sp. 4_1_44FAA]
gi|363654420|gb|EHL93323.1| putrescine-binding periplasmic protein [Klebsiella sp. 4_1_44FAA]
Length = 370
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 155 APVDSWDLVLKPENFEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGALAFFDVFAMPADAK 287
>gi|386034068|ref|YP_005953981.1| putrescine ABC transporter periplasmic-binding protein [Klebsiella
pneumoniae KCTC 2242]
gi|424829863|ref|ZP_18254591.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Klebsiella pneumoniae subsp. pneumoniae Ecl8]
gi|339761196|gb|AEJ97416.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae KCTC 2242]
gi|414707288|emb|CCN28992.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Klebsiella pneumoniae subsp. pneumoniae Ecl8]
Length = 370
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 155 APVDSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGALAFFDVFAMPADAK 287
>gi|260769730|ref|ZP_05878663.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio furnissii CIP 102972]
gi|375133100|ref|YP_005049508.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Vibrio furnissii
NCTC 11218]
gi|260615068|gb|EEX40254.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio furnissii CIP 102972]
gi|315182275|gb|ADT89188.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio furnissii
NCTC 11218]
Length = 344
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 30/221 (13%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALL 77
I WKDLW + A ++ +++ R+V G LK G S N+ N + ++ Q+LA L
Sbjct: 144 ITQWKDLWNSKYAQQVMLIDDIRDVFGMALKLNGYSINTKN-EKEIE----QAYQSLAAL 198
Query: 78 ANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 137
+ L++S + G+ + + W+ + + M + V+P GA LW D + IP
Sbjct: 199 KDNVLLYNSDAPHVPYVSGEASLGMQWNGNAYQGQQEMPELKFVMPAEGAVLWMDNFTIP 258
Query: 138 AASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG-ASPSALETTLVKLPE 196
+ S + L H++I F Q + E++ SA ++ LPE
Sbjct: 259 SGSEHKA------------LAHKFINFMYQPEN----QAEIVNSLGYASATKSGRALLPE 302
Query: 197 ELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
L N P E +A+ EF+ + L+ YE
Sbjct: 303 AL--------RNNATIFPAEEDMAKGEFINDVGPQALAIYE 335
>gi|260867027|ref|YP_003233429.1| putrescine transporter subunit PotF [Escherichia coli O111:H- str.
11128]
gi|415824741|ref|ZP_11512975.1| putrescine-binding periplasmic protein [Escherichia coli OK1180]
gi|417192859|ref|ZP_12014706.1| putrescine-binding periplasmic protein [Escherichia coli 4.0522]
gi|417590576|ref|ZP_12241291.1| putrescine-binding periplasmic protein [Escherichia coli 2534-86]
gi|419195972|ref|ZP_13739376.1| putrescine-binding periplasmic protein [Escherichia coli DEC8A]
gi|419891682|ref|ZP_14411727.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9570]
gi|419894607|ref|ZP_14414503.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9574]
gi|420088758|ref|ZP_14600618.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9602]
gi|420098068|ref|ZP_14609349.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9634]
gi|424769414|ref|ZP_18196641.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str.
CFSAN001632]
gi|257763383|dbj|BAI34878.1| putrescine transporter subunit PotF [Escherichia coli O111:H- str.
11128]
gi|323175524|gb|EFZ61119.1| putrescine-binding periplasmic protein [Escherichia coli OK1180]
gi|345344522|gb|EGW76889.1| putrescine-binding periplasmic protein [Escherichia coli 2534-86]
gi|378051780|gb|EHW14095.1| putrescine-binding periplasmic protein [Escherichia coli DEC8A]
gi|386190040|gb|EIH78788.1| putrescine-binding periplasmic protein [Escherichia coli 4.0522]
gi|388349030|gb|EIL14580.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9570]
gi|388363444|gb|EIL27373.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9574]
gi|394382247|gb|EJE59894.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9634]
gi|394389548|gb|EJE66690.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str. CVM9602]
gi|421944063|gb|EKU01325.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Escherichia coli O111:H8 str.
CFSAN001632]
Length = 370
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|110803710|ref|YP_699248.1| spermidine/putrescine-binding periplasmic protein precursor
[Clostridium perfringens SM101]
gi|110684211|gb|ABG87581.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens SM101]
Length = 360
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 30/226 (13%)
Query: 17 PIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID-LQVAGGKISVQQNLA 75
P++ W LW P+ ++ M +S R+ + K +G S N+ N+D ++ A ++ Q+
Sbjct: 156 PVDSWNILWNPKYKDQVIMPDSVRDAMAVAEKKLGYSLNTENLDQIEAAKKELMTQKKDG 215
Query: 76 LLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWA 135
L+ A + D A G+ +AV WS D + ++R ++A +PK G++ W D
Sbjct: 216 LIL--AYMVDQVK--DAMVGGEASLAVAWSGDAVTMIERNPDLAYAIPKEGSNKWFDAIG 271
Query: 136 IPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLP 195
IP ++ + ++I F + A E I ++P+ L LP
Sbjct: 272 IPKNAKHKENA------------EKFINFLCDSENAEQ-NVEYIGYSTPNTAAYDL--LP 316
Query: 196 EELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE--WL 239
E++ K V P E L CE L L Y+ WL
Sbjct: 317 EDIRDNK--------VAYPDKESLKNCEVFIDLPSKILRKYDEAWL 354
>gi|421725684|ref|ZP_16164869.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella oxytoca M5al]
gi|410373478|gb|EKP28174.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella oxytoca M5al]
Length = 370
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 82/179 (45%), Gaps = 19/179 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 155 APLDSWDLVMKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPK 270
Query: 125 SGASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH--QWIEFCLQTARALPFKQEVI 179
GA + D++A+P A ++ E Q + P + H + + +LP E I
Sbjct: 271 EGALAFFDVFAMPADAKNKDEAYQFLNYLMRPDVIAHISDHVYYANGNKASLPLVSEEI 329
>gi|425080696|ref|ZP_18483793.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW2]
gi|428936123|ref|ZP_19009554.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae JHCK1]
gi|405605831|gb|EKB78835.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW2]
gi|426298988|gb|EKV61354.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae JHCK1]
Length = 370
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 155 APVDSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGALAFFDVFAMPADAK 287
>gi|152969442|ref|YP_001334551.1| putrescine ABC transporter periplasmic-binding protein [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|206577099|ref|YP_002239497.1| putrescine ABC transporter periplasmic-binding protein [Klebsiella
pneumoniae 342]
gi|288936345|ref|YP_003440404.1| family 1 extracellular solute-binding protein [Klebsiella variicola
At-22]
gi|290510599|ref|ZP_06549969.1| periplasmic-binding component [Klebsiella sp. 1_1_55]
gi|329999807|ref|ZP_08303535.1| putrescine-binding periplasmic protein [Klebsiella sp. MS 92-3]
gi|378977921|ref|YP_005226062.1| spermidine/putrescine transport system periplasmic
substrate-binding component [Klebsiella pneumoniae
subsp. pneumoniae HS11286]
gi|402781600|ref|YP_006637146.1| Putrescine ABC transporter putrescine-binding protein PotF
[Klebsiella pneumoniae subsp. pneumoniae 1084]
gi|419762541|ref|ZP_14288788.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
DSM 30104]
gi|419971965|ref|ZP_14487395.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|419978771|ref|ZP_14494066.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|419985544|ref|ZP_14500684.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|419992759|ref|ZP_14507711.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|419995076|ref|ZP_14509884.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|420003546|ref|ZP_14518191.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|420009197|ref|ZP_14523682.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|420016570|ref|ZP_14530860.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|420021885|ref|ZP_14536060.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|420025169|ref|ZP_14539179.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|420032279|ref|ZP_14546095.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|420039041|ref|ZP_14552681.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|420043699|ref|ZP_14557185.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|420050082|ref|ZP_14563385.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|420056222|ref|ZP_14569381.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|420061218|ref|ZP_14574209.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|420067945|ref|ZP_14580732.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|420072702|ref|ZP_14585337.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|420077640|ref|ZP_14590104.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|420083426|ref|ZP_14595708.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|421909288|ref|ZP_16339108.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|421915899|ref|ZP_16345491.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|424934273|ref|ZP_18352645.1| Putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KpQ3]
gi|425077462|ref|ZP_18480565.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW1]
gi|425088095|ref|ZP_18491188.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW3]
gi|425090758|ref|ZP_18493843.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW5]
gi|428150839|ref|ZP_18998595.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
gi|428941619|ref|ZP_19014657.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae VA360]
gi|449057000|ref|ZP_21735513.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae hvKP1]
gi|150954291|gb|ABR76321.1| periplasmic putrescine-binding protein; permease protein
[Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
gi|206566157|gb|ACI07933.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Klebsiella pneumoniae 342]
gi|288891054|gb|ADC59372.1| extracellular solute-binding protein family 1 [Klebsiella variicola
At-22]
gi|289777315|gb|EFD85313.1| periplasmic-binding component [Klebsiella sp. 1_1_55]
gi|328538204|gb|EGF64354.1| putrescine-binding periplasmic protein [Klebsiella sp. MS 92-3]
gi|364517332|gb|AEW60460.1| spermidine/putrescine transport system periplasmic
substrate-binding component [Klebsiella pneumoniae
subsp. pneumoniae HS11286]
gi|397351214|gb|EJJ44299.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|397351358|gb|EJJ44442.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|397352903|gb|EJJ45981.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|397360172|gb|EJJ52854.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|397368849|gb|EJJ61454.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|397369366|gb|EJJ61967.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|397374739|gb|EJJ67059.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|397381977|gb|EJJ74142.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|397385957|gb|EJJ78044.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|397397726|gb|EJJ89398.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|397398046|gb|EJJ89712.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|397403619|gb|EJJ95176.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|397412009|gb|EJK03253.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|397413505|gb|EJK04718.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|397420859|gb|EJK11906.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|397427266|gb|EJK18047.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|397431278|gb|EJK21955.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|397438769|gb|EJK29249.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|397445829|gb|EJK36062.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|397451255|gb|EJK41343.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|397744722|gb|EJK91933.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
DSM 30104]
gi|402542476|gb|AFQ66625.1| Putrescine ABC transporter putrescine-binding protein PotF
[Klebsiella pneumoniae subsp. pneumoniae 1084]
gi|405593171|gb|EKB66623.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW1]
gi|405602227|gb|EKB75369.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW3]
gi|405613736|gb|EKB86465.1| putrescine-binding periplasmic protein [Klebsiella pneumoniae
subsp. pneumoniae WGLW5]
gi|407808460|gb|EKF79711.1| Putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae subsp. pneumoniae
KpQ3]
gi|410116845|emb|CCM81733.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|410121811|emb|CCM88116.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|426300139|gb|EKV62438.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae VA360]
gi|427539108|emb|CCM94733.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
gi|448875441|gb|EMB10458.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella pneumoniae hvKP1]
Length = 370
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 155 APVDSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGALAFFDVFAMPADAK 287
>gi|424923080|ref|ZP_18346441.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
gi|404304240|gb|EJZ58202.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
Length = 362
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 67/134 (50%), Gaps = 20/134 (14%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKI-SV 70
I+ W L+ PE + +SM++S EV ++L YMG S N D + A K+ S+
Sbjct: 150 IDSWAVLFEPENIKKLSQCGVSMMDSADEVFPAILNYMGMDPRSENPEDFKKAEAKLLSI 209
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
+ + F S+ Y+ GD+ VA G+S DV A R N+A +PK
Sbjct: 210 RPYITY-------FHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPK 262
Query: 125 SGASLWADLWAIPA 138
GA+LW DL A+PA
Sbjct: 263 EGANLWFDLLAVPA 276
>gi|420241083|ref|ZP_14745247.1| spermidine/putrescine-binding periplasmic protein [Rhizobium sp.
CF080]
gi|398072841|gb|EJL64038.1| spermidine/putrescine-binding periplasmic protein [Rhizobium sp.
CF080]
Length = 365
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 16/136 (11%)
Query: 17 PIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQ 71
PI+ W L++PE A + I+++++ E L Y+G + +S + AGG + +
Sbjct: 152 PIDSWSVLFKPENAAKLKSCGINILDASDETFAIALNYLGKNPDSKDTKDLEAGGAVYNK 211
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
+ + F+S+ Y+ GD + +GWS DVL A R N+ ++PK
Sbjct: 212 -----IRKSVKTFNSSAYIDELANGDSCITIGWSGDVLQAKTRAEEAKNGVNIEFIIPKE 266
Query: 126 GASLWADLWAIPAASR 141
G +W D AIPA ++
Sbjct: 267 GTYMWFDNLAIPADAK 282
>gi|146280465|ref|YP_001170618.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri A1501]
gi|386018710|ref|YP_005936734.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri DSM 4166]
gi|145568670|gb|ABP77776.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas stutzeri A1501]
gi|327478682|gb|AEA81992.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas stutzeri DSM 4166]
Length = 361
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 94/217 (43%), Gaps = 43/217 (19%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQ 71
I+ W L+ PE A + I+ ++S E+I ++L Y+G NS N D Q A +
Sbjct: 149 IDSWSVLFEPENAQKLASCGIAFLDSADEMIPAMLNYLGLDPNSENAADYQKA------E 202
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKS 125
+ L + R F S+ Y+ G++ VA G+S DV A R +A +PK
Sbjct: 203 EKLLAVRPHVRYFHSSKYISDLANGNICVAAGFSGDVFQAAARAEEAGKGIEIAYAIPKE 262
Query: 126 GASLWADLWAIPA-ASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASP 184
G +LW D+ AIPA AS +E H +I + L + EVI S
Sbjct: 263 GGNLWFDMLAIPADASNVEEA-------------HAFINYLL--------RPEVIAAVSD 301
Query: 185 SALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILAR 221
EL+ + +D ++ PP E+L R
Sbjct: 302 YVGYANPNLKASELMDQEVREDASV---YPPQEVLDR 335
>gi|392957073|ref|ZP_10322598.1| family 1 extracellular solute-binding protein [Bacillus macauensis
ZFHKF-1]
gi|391876975|gb|EIT85570.1| family 1 extracellular solute-binding protein [Bacillus macauensis
ZFHKF-1]
Length = 357
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 107/244 (43%), Gaps = 35/244 (14%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN-SNNIDL 61
I Y K N I W+DLW +L +I +V+ RE++G L G S N +N+ L
Sbjct: 143 IVYNKKLLGNKN---ITSWQDLWDKDLRNKIFLVDGVREIMGIGLTTTGYSLNDTNHQHL 199
Query: 62 QVAGGKISVQQNLALLAN-QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAV 120
Q A K+ L+ N +A + D T L A GD + +GWS + + ++
Sbjct: 200 QKAKRKLD-----TLIPNVRAIVGDETKLLLA--NGDASIGIGWSGNAAEIIDENPDLDY 252
Query: 121 VVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIP 180
V+PK G++LW D IP ++ + + Q++ F L A E +
Sbjct: 253 VIPKEGSNLWFDNMVIPKTAKNKKAAL------------QFMNFMLDPKVAAQ-NTEYVH 299
Query: 181 GASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLV 240
+SP+ + L LP+E+ S D PP +I + E LS+ +S + L
Sbjct: 300 YSSPN--KAALKYLPKEI-----STDKRF---YPPKKITDQLEVYRNLSQKDISYFNELF 349
Query: 241 ADLQ 244
+ +
Sbjct: 350 LEFK 353
>gi|23100612|ref|NP_694079.1| spermidine:putrescine ABC transporter [Oceanobacillus iheyensis
HTE831]
gi|22778845|dbj|BAC15113.1| spermidine:putrescine ABC transporter spermidine:putrescine-binding
protein [Oceanobacillus iheyensis HTE831]
Length = 358
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 34/222 (15%)
Query: 21 WKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID-LQVAGGKI-SVQQNL-ALL 77
W DLW P L +I +++ RE+IG L +G S N N + L A K+ + N+ A++
Sbjct: 159 WHDLWDPALENQILLIDGAREIIGMGLNSLGYSLNDTNPEHLYQALEKLEELTPNVRAIV 218
Query: 78 ANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 137
++ ++ + + + +A+GWS D + + +VP+ G++LW D + IP
Sbjct: 219 GDENKMLMANN--------EATIAIGWSGDAADIMGENEAIDYLVPEEGSNLWFDNFVIP 270
Query: 138 AASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEE 197
+R I G HQ+I F L A E + ++P+ + L +PEE
Sbjct: 271 KTAR----NIDGA--------HQFINFMLDAEIAAQ-NTEYVSYSTPN--KEALQFMPEE 315
Query: 198 LLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
+++ + P E+ R E E L + L+ Y L
Sbjct: 316 MVEDERF--------YPDPELTDRLEVYENLGQRNLAFYNEL 349
>gi|110799081|ref|YP_696650.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Clostridium perfringens ATCC 13124]
gi|168208672|ref|ZP_02634297.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens B str. ATCC 3626]
gi|168215597|ref|ZP_02641222.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens NCTC 8239]
gi|182624392|ref|ZP_02952176.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens D str. JGS1721]
gi|110673728|gb|ABG82715.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens ATCC 13124]
gi|170713086|gb|EDT25268.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens B str. ATCC 3626]
gi|177910395|gb|EDT72772.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens D str. JGS1721]
gi|182382380|gb|EDT79859.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens NCTC 8239]
Length = 360
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 97/226 (42%), Gaps = 30/226 (13%)
Query: 17 PIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID-LQVAGGKISVQQNLA 75
P++ W LW P+ ++ M +S R+ + K +G S N+ N+D ++ A ++ Q+
Sbjct: 156 PVDSWNILWNPKYKDQVIMPDSVRDAMAVAEKKLGYSLNTENLDQIEAAKKELMTQKKDG 215
Query: 76 LLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWA 135
L+ A + D A G+ +AV WS D + ++R ++A +PK G++ W D A
Sbjct: 216 LIL--AYMVDQVK--DAMVGGEASLAVAWSGDAVTMIERNPDLAYAIPKEGSNKWFDAIA 271
Query: 136 IPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLP 195
IP ++ + ++I F A E I ++P+ L LP
Sbjct: 272 IPKNAKHKENA------------EKFINFLCDPENAEQ-NVEYIGYSTPNTAAYDL--LP 316
Query: 196 EELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE--WL 239
E++ K V P E L CE L L Y+ WL
Sbjct: 317 EDIRDDK--------VAYPDEESLKNCEVFIDLPSKILRKYDEAWL 354
>gi|168204845|ref|ZP_02630850.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens E str. JGS1987]
gi|169343777|ref|ZP_02864776.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens C str. JGS1495]
gi|422346637|ref|ZP_16427551.1| hypothetical protein HMPREF9476_01624 [Clostridium perfringens
WAL-14572]
gi|422874887|ref|ZP_16921372.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens F262]
gi|169298337|gb|EDS80427.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens C str. JGS1495]
gi|170663543|gb|EDT16226.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens E str. JGS1987]
gi|373226182|gb|EHP48509.1| hypothetical protein HMPREF9476_01624 [Clostridium perfringens
WAL-14572]
gi|380304161|gb|EIA16452.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens F262]
Length = 360
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 97/226 (42%), Gaps = 30/226 (13%)
Query: 17 PIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID-LQVAGGKISVQQNLA 75
P++ W LW P+ ++ M +S R+ + K +G S N+ N+D ++ A ++ Q+
Sbjct: 156 PVDSWNILWNPKYKDQVIMPDSVRDAMAVAEKKLGYSLNTENLDQIEAAKKELMTQKKDG 215
Query: 76 LLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWA 135
L+ A + D A G+ +AV WS D + ++R ++A +PK G++ W D A
Sbjct: 216 LIL--AYMVDQVK--DAMVGGEASLAVAWSGDAVTMIERNPDLAYAIPKEGSNKWFDAIA 271
Query: 136 IPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLP 195
IP ++ + ++I F A E I ++P+ L LP
Sbjct: 272 IPKNAKHKENA------------EKFINFLCDPENAEQ-NVEYIGYSTPNTAAYDL--LP 316
Query: 196 EELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE--WL 239
E++ K V P E L CE L L Y+ WL
Sbjct: 317 EDIRDDK--------VAYPDEESLKNCEVFIDLPSKILRKYDEAWL 354
>gi|18310953|ref|NP_562887.1| spermidine/putrescine ABC transporter [Clostridium perfringens str.
13]
gi|168212994|ref|ZP_02638619.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens CPE str. F4969]
gi|18145635|dbj|BAB81677.1| probable spermidine/putrescine ABC transporter [Clostridium
perfringens str. 13]
gi|170715466|gb|EDT27648.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
perfringens CPE str. F4969]
Length = 360
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 97/226 (42%), Gaps = 30/226 (13%)
Query: 17 PIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID-LQVAGGKISVQQNLA 75
P++ W LW P+ ++ M +S R+ + K +G S N+ N+D ++ A ++ Q+
Sbjct: 156 PVDSWNILWNPKYKDQVIMPDSVRDAMAVAEKKLGYSLNTENLDQIEAAKKELMTQKKDG 215
Query: 76 LLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWA 135
L+ A + D A G+ +AV WS D + ++R ++A +PK G++ W D A
Sbjct: 216 LIL--AYMVDQVK--DAMVGGEASLAVAWSGDAVTMIERNPDLAYAIPKEGSNKWFDAIA 271
Query: 136 IPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLP 195
IP ++ + ++I F A E I ++P+ L LP
Sbjct: 272 IPKNAKHKENA------------EKFINFLCDPENAEQ-NVEYIGYSTPNTAAYDL--LP 316
Query: 196 EELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE--WL 239
E++ K V P E L CE L L Y+ WL
Sbjct: 317 EDIRDDK--------VAYPDEESLKNCEVFIDLPSKILRKYDEAWL 354
>gi|339492154|ref|YP_004712447.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri ATCC 17588 = LMG 11199]
gi|338799526|gb|AEJ03358.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas stutzeri ATCC 17588 = LMG 11199]
Length = 361
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 94/217 (43%), Gaps = 43/217 (19%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQ 71
I+ W L+ PE A + I+ ++S E+I ++L Y+G NS N D Q A +
Sbjct: 149 IDSWSVLFEPENAQKLASCGIAFLDSADEMIPAMLNYLGLDPNSENAADYQKA------E 202
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKS 125
+ L + R F S+ Y+ G++ VA G+S DV A R +A +PK
Sbjct: 203 EKLLAVRPHVRYFHSSKYISDLANGNICVAAGFSGDVFQAAARAEEAGKGIEIAYAIPKE 262
Query: 126 GASLWADLWAIPA-ASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASP 184
G +LW D+ AIPA AS +E H +I + L + EVI S
Sbjct: 263 GGNLWFDMLAIPADASNVEEA-------------HAFINYLL--------RPEVIAAVSD 301
Query: 185 SALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILAR 221
EL+ + +D ++ PP E+L R
Sbjct: 302 YVGYANPNLKASELMDQEVREDASVY---PPQEVLDR 335
>gi|312881643|ref|ZP_07741421.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
caribbenthicus ATCC BAA-2122]
gi|309370706|gb|EFP98180.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio
caribbenthicus ATCC BAA-2122]
Length = 345
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 60/124 (48%), Gaps = 11/124 (8%)
Query: 21 WKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNS---NNIDLQVAGGKISVQQNLALL 77
W DLWRPEL G+I +++ REV LK +G S NS N ID S + L L
Sbjct: 152 WSDLWRPELKGQIMLMDDTREVFHIALKKLGFSGNSTDPNQID--------SAFEELKTL 203
Query: 78 ANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 137
LF+S + + G+V V + W+ A K N+ +V PK G W D +AIP
Sbjct: 204 MPNVLLFNSDNPAAPYLSGEVGVGMLWNGSAAAAQKEGLNLQLVFPKEGGIGWVDNFAIP 263
Query: 138 AASR 141
+
Sbjct: 264 KGAH 267
>gi|94499306|ref|ZP_01305844.1| polyamine ABC transporter, periplasmic polyamine-binding protein
[Bermanella marisrubri]
gi|94428938|gb|EAT13910.1| polyamine ABC transporter, periplasmic polyamine-binding protein
[Oceanobacter sp. RED65]
Length = 361
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 77/163 (47%), Gaps = 28/163 (17%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP + W ++ P+ + + IS+++S EV+ VL Y+G NS N G
Sbjct: 149 APTDSWDLIFDPKYSSKLKECGISVLDSAGEVLPLVLNYLGLDPNSKN-----KGDYDKA 203
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
++ + + + R F S+ Y+ GD+ VA+GWS DV A R +A +PK
Sbjct: 204 EEKMLSIRDNIRYFHSSRYISDLANGDLCVAIGWSGDVFQAAARAEEAENGVEIAYYIPK 263
Query: 125 SGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQ 167
G ++W+D+ AIP ++ +Q H+WI + L
Sbjct: 264 EGTAMWSDMMAIPKDAK-NVEQ-----------AHKWINYILD 294
>gi|347732884|ref|ZP_08865955.1| potD [Desulfovibrio sp. A2]
gi|347518360|gb|EGY25534.1| potD [Desulfovibrio sp. A2]
Length = 345
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 19/153 (12%)
Query: 16 APIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNL 74
A I W DL RPE AG++ + + R+ +G LK +G S NS N +++ A + L
Sbjct: 143 ASITSWNDLNRPEFAGKVILSDDQRDSMGVALKALGYSVNSTNEAEIKAA------YEWL 196
Query: 75 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 134
L R+FD T +AF +V + W+ D A N+ + PK G LW D
Sbjct: 197 KKLLPAVRVFDVTASKQAFISEEVAAGLIWNGDAYIAASENKNLVYIYPKEGVPLWVDSL 256
Query: 135 AIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQ 167
AIP ++ + H++I+F L+
Sbjct: 257 AIPVGAKHKENA------------HKFIDFLLR 277
>gi|377576361|ref|ZP_09805345.1| putrescine ABC transporter substrate binding periplasmic protein
[Escherichia hermannii NBRC 105704]
gi|377542393|dbj|GAB50510.1| putrescine ABC transporter substrate binding periplasmic protein
[Escherichia hermannii NBRC 105704]
Length = 370
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 17/156 (10%)
Query: 17 PIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQ 71
P+ W + +PE + +S +++P EV +VL Y+G NS D
Sbjct: 156 PLNSWDLVLKPENLAKLKSCGVSFLDAPEEVFATVLNYLGKDPNSEKADDYTG----PAT 211
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
+ L L R F S+ Y+ GD+ VA+GW+ DV A R N++ ++PK
Sbjct: 212 ELLLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNISYIIPKE 271
Query: 126 GASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH 159
GA + D++A+P A ++ E Q + P + H
Sbjct: 272 GALAFFDVFAMPTDAKNKEEAYQFLNYLMRPDVIAH 307
>gi|271963417|ref|YP_003337613.1| spermidine/putrescine-binding periplasmic protein-like protein
[Streptosporangium roseum DSM 43021]
gi|270506592|gb|ACZ84870.1| Spermidine/putrescine-binding periplasmic protein-like protein
[Streptosporangium roseum DSM 43021]
Length = 413
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 5/121 (4%)
Query: 22 KDLWRPELAGRISMVNSPREVIGSVLKYMGASYN-SNNIDLQVAGGKISVQQNLALLANQ 80
+DLW P+ G++ M+ +EV + +G + S D + AG K+ Q++ L+
Sbjct: 201 QDLWNPKYKGKVGMMLDTQEVANFGMFSLGIDPDKSTEADWRKAGEKLKAQRDAGLV--- 257
Query: 81 ARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 140
R + Y+ A GDVW+ + WS D+ V ++ VVP+ G ++W D IP +
Sbjct: 258 -RKYYENDYVDALVRGDVWITMAWSGDIFQQVAEGKDLKFVVPEEGGTIWTDNMCIPKTA 316
Query: 141 R 141
+
Sbjct: 317 Q 317
>gi|148652871|ref|YP_001279964.1| extracellular solute-binding protein [Psychrobacter sp. PRwf-1]
gi|148571955|gb|ABQ94014.1| extracellular solute-binding protein, family 1 [Psychrobacter sp.
PRwf-1]
Length = 374
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 103/239 (43%), Gaps = 38/239 (15%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGS---VLKYMGASYNSNNI 59
IA KS+ ++ I W DLWRPE GR+ ++N R+V L Y +++ +I
Sbjct: 160 IAVNKSRI---DINSITSWNDLWRPEFEGRVMLMNDLRDVFTMGLLTLGYPATTHDPKHI 216
Query: 60 DLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR-MSNV 118
+ + Q L+ L R F+S F G+ ++ + W+ +V+ A + M +
Sbjct: 217 E--------AAYQKLSKLMPNVRTFNSDAPRMPFMEGETYLGLAWNGEVIMAQDQGMPEL 268
Query: 119 AVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEV 178
V PK G +W D +IP ++ + +I++ L+ A +E+
Sbjct: 269 DFVYPKEGVIMWMDNMSIPKNAKNRENA------------YAFIDYLLRPDNAAIISEEI 316
Query: 179 IPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
G SP+ E K P+ N + PP ++L F E + + T++ Y+
Sbjct: 317 GYG-SPN----------ESAKKLMPADIANNQIIYPPDDLLGHALFREDVGDTTMALYQ 364
>gi|423107544|ref|ZP_17095239.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5243]
gi|376388316|gb|EHT01015.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5243]
Length = 370
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 17/157 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P E+ +VL Y+G NS D G +
Sbjct: 155 APLDSWDLVMKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPK 270
Query: 125 SGASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH 159
GA + D++A+P A ++ E Q + P + H
Sbjct: 271 EGALAFFDVFAMPADAKNKDEAYQFLNYLMRPDVIAH 307
>gi|392423251|ref|YP_006459855.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri CCUG 29243]
gi|390985439|gb|AFM35432.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri CCUG 29243]
Length = 361
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 71/139 (51%), Gaps = 19/139 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQ 71
I+ W ++ PE A + I+ ++S E+I ++L Y+G NS N D Q A +
Sbjct: 149 IDSWAVIFEPENAEKLASCGIAFLDSADEMIPAMLNYLGLDPNSENAADYQKA------E 202
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKS 125
+ L + R F S+ Y+ G++ VA G+S DV A R +A +PK
Sbjct: 203 EKLLAVRPHVRYFHSSKYISDLANGNICVAAGFSGDVFQAAARAEEAGKGVEIAYAIPKE 262
Query: 126 GASLWADLWAIPA-ASRLE 143
GA+LW D+ AIPA AS +E
Sbjct: 263 GANLWFDMLAIPADASNVE 281
>gi|452877940|ref|ZP_21955185.1| polyamine transport protein PotD [Pseudomonas aeruginosa VRFPA01]
gi|452185377|gb|EME12395.1| polyamine transport protein PotD [Pseudomonas aeruginosa VRFPA01]
Length = 353
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 32/206 (15%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRISMVNSPREVIGSVLKYMGASYNSN 57
++ Y K++ K + P DW ++ P ++ GR+++++ P+E+ G+ LKY+G S +N
Sbjct: 128 LVGYNKTELDKLGIDPA-DWSVIFDPAVLQKIRGRVTVMDDPQELFGAALKYLGHS--AN 184
Query: 58 NIDLQVAGGKISVQQNLALLANQA-RLFDSTHYLKAFGIGDVWVAVGWSSDVL------P 110
+ D Q Q L L A F+S+ Y+K +G++WVA G+SSD+
Sbjct: 185 DTDPQ----HWKEAQALILAAKPYWAAFNSSSYIKELTLGNIWVAHGYSSDMYQARADAE 240
Query: 111 AVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTAR 170
A R V +P+ GA L D I S R P L +++I+F L
Sbjct: 241 AAGRAFKVDFALPRQGAVLAIDSMVIHKGS-----------RNPD-LAYRFIDFMLDGRN 288
Query: 171 ALPFKQEVIPGASPSALETTLVKLPE 196
A ++ G +P+A +K PE
Sbjct: 289 ASELANQIGTG-TPNAAALPFIK-PE 312
>gi|339998775|ref|YP_004729658.1| putrescine-binding periplasmic protein [Salmonella bongori NCTC
12419]
gi|339512136|emb|CCC29867.1| putrescine-binding periplasmic protein precursor [Salmonella
bongori NCTC 12419]
Length = 370
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 17/138 (12%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS+N A
Sbjct: 155 APVNSWDLVLKPENLAKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSN-----ANDYTGP 209
Query: 71 QQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVP 123
+L L L R F S+ Y+ GD VA+GW+ DV A R N++ +P
Sbjct: 210 ATDLLLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIP 269
Query: 124 KSGASLWADLWAIPAASR 141
K GA + D++A+PA ++
Sbjct: 270 KEGAMAFFDVFAMPADAK 287
>gi|452750133|ref|ZP_21949885.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri NF13]
gi|452005783|gb|EMD98063.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri NF13]
Length = 361
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 71/139 (51%), Gaps = 19/139 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQ 71
I+ W ++ PE A + I+ ++S E+I ++L Y+G NS N D Q A +
Sbjct: 149 IDSWAVIFEPENAEKLASCGIAFLDSADEMIPAMLNYLGLDPNSENAADYQKA------E 202
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKS 125
+ L + R F S+ Y+ G++ VA G+S DV A R +A +PK
Sbjct: 203 EKLLAVRPHVRYFHSSKYISDLANGNICVAAGFSGDVFQAAARAEEAGKGVEIAYAIPKE 262
Query: 126 GASLWADLWAIPA-ASRLE 143
GA+LW D+ AIPA AS +E
Sbjct: 263 GANLWFDMLAIPADASNVE 281
>gi|429215499|ref|ZP_19206659.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. M1]
gi|428153906|gb|EKX00459.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. M1]
Length = 361
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 65/133 (48%), Gaps = 18/133 (13%)
Query: 18 IEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W L+ PE ++S ++SP E+I SVL Y+G NS N D A K
Sbjct: 149 IDSWAVLFEPENIKKLSACGVAFMDSPDEMIPSVLNYLGLDPNSTNPADYPKAEAK---- 204
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKS 125
LA + F S+ Y+ G++ VA G+S DV A R +A +PK
Sbjct: 205 --LAAVRPYVTYFHSSKYISDLANGNICVAFGYSGDVFQAAARAREAKNGIEIAYAIPKE 262
Query: 126 GASLWADLWAIPA 138
GA+LW DL AIP+
Sbjct: 263 GANLWFDLMAIPS 275
>gi|365848786|ref|ZP_09389257.1| putrescine-binding periplasmic protein [Yokenella regensburgei ATCC
43003]
gi|364569430|gb|EHM47052.1| putrescine-binding periplasmic protein [Yokenella regensburgei ATCC
43003]
Length = 370
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVNSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R N++ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNISYSIPK 270
Query: 125 SGASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH--QWIEFCLQTARALPFKQEVI- 179
GA + D++A+P A ++ E Q + P + H + + A P E +
Sbjct: 271 EGALAFFDVFAMPADAKNKDEAYQFLNYLLRPDVIAHISDHVFYANVNKAATPLVSEAVR 330
Query: 180 --PGASPSA 186
PG P A
Sbjct: 331 DNPGIYPPA 339
>gi|429108125|ref|ZP_19169994.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter malonaticus 681]
gi|426294848|emb|CCJ96107.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter malonaticus 681]
Length = 370
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 17/157 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS+ D +G +
Sbjct: 155 APLNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKPD-DYSGAATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R N++ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNISYTIPK 270
Query: 125 SGASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH 159
GA + D++A+P A ++ E Q + P + H
Sbjct: 271 EGALAFFDVFAMPADAKNKDEAYQFLNYLMRPDVMAH 307
>gi|307130758|ref|YP_003882774.1| putrescine ABC transporter substrate-binding protein [Dickeya
dadantii 3937]
gi|306528287|gb|ADM98217.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Dickeya dadantii 3937]
Length = 369
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 40/218 (18%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y G + NS N A
Sbjct: 154 APVNSWDLVLKPENLEKLKSCGVSFLDAPAEIYATVLNYQGKNPNSTN----EADYTKDA 209
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV+ A R N++ +PK
Sbjct: 210 TDLLLKLRPSVRYFHSSQYINDLANGDICVAIGWAGDVMQAANRAKEAKNGVNISYSIPK 269
Query: 125 SGASLWADLWAIPA-ASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGAS 183
GA + D++AIP A L++ +Q++ + L+ V A+
Sbjct: 270 EGALAFFDVFAIPKDAKNLDS-------------AYQFLNYLLKPDVIANVSNHVY-YAN 315
Query: 184 PSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILAR 221
P+ T LVK E ++ P+ PPA+I A+
Sbjct: 316 PNKEATALVK---EEVRNNPNI-------YPPADIRAK 343
>gi|218887047|ref|YP_002436368.1| extracellular solute-binding protein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758001|gb|ACL08900.1| extracellular solute-binding protein family 1 [Desulfovibrio
vulgaris str. 'Miyazaki F']
Length = 358
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 19/153 (12%)
Query: 16 APIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNL 74
A I W DL RPE AG++ + + R+ +G LK +G S NS N +++ A + L
Sbjct: 156 ASITSWNDLNRPEFAGKVILSDDQRDSMGVALKALGYSVNSTNEAEIKAA------YEWL 209
Query: 75 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 134
L R+FD T +AF +V + W+ D A N+ V P+ G LW D
Sbjct: 210 KKLLPAVRVFDVTASKQAFISEEVAAGLIWNGDAYIAASENENLVYVYPREGVPLWVDSL 269
Query: 135 AIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQ 167
AIP ++ + H++I+F L+
Sbjct: 270 AIPVGAKHKDNA------------HKFIDFLLR 290
>gi|429048944|ref|ZP_19113597.1| putrescine-binding periplasmic protein [Escherichia coli 97.0003]
gi|427304345|gb|EKW67002.1| putrescine-binding periplasmic protein [Escherichia coli 97.0003]
Length = 370
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLIPKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|94987274|ref|YP_595207.1| spermidine/putrescine-binding periplasmic protein [Lawsonia
intracellularis PHE/MN1-00]
gi|94731523|emb|CAJ54886.1| Spermidine/putrescine-binding periplasmic protein [Lawsonia
intracellularis PHE/MN1-00]
Length = 350
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 7/129 (5%)
Query: 10 FRKHNLAP--IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGK 67
F K + P I + DL RPE GR+ + + R+ G LK G S N+ N D ++ G
Sbjct: 140 FNKKVVDPTVITSFNDLNRPEFKGRVLLSDDMRDTFGVALKVRGYSVNTTNPD-EIKAGY 198
Query: 68 ISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGA 127
+QQ L + R+FD T +AF +V + W+ D A+K N+ + PK G
Sbjct: 199 EWLQQ----LKPEIRVFDITATKQAFIGEEVLAGISWNGDAFIAMKENPNLQFIFPKEGF 254
Query: 128 SLWADLWAI 136
LW D ++I
Sbjct: 255 ILWIDNFSI 263
>gi|455643997|gb|EMF23118.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Citrobacter freundii GTC 09479]
Length = 370
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N++ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|375259929|ref|YP_005019099.1| putrescine ABC transporter periplasmic-binding protein [Klebsiella
oxytoca KCTC 1686]
gi|365909407|gb|AEX04860.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Klebsiella oxytoca KCTC 1686]
Length = 370
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P E+ +VL Y+G NS D G +
Sbjct: 155 APLDSWDLVMKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYYIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGALAFFDVFAMPADAK 287
>gi|283833847|ref|ZP_06353588.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Citrobacter youngae ATCC 29220]
gi|291070515|gb|EFE08624.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Citrobacter youngae ATCC 29220]
Length = 370
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N++ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|146311026|ref|YP_001176100.1| putrescine ABC transporter periplasmic-binding protein
[Enterobacter sp. 638]
gi|145317902|gb|ABP60049.1| extracellular solute-binding protein, family 1 [Enterobacter sp.
638]
Length = 370
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 3 IAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYN 55
I Y K +K P++ W + +PE + +S +++P E+ +VL Y+G N
Sbjct: 140 IGYNVDKVKKALGTDVPLDSWDMVLKPENLAKLKSCGVSFLDAPEEIFATVLNYLGKDPN 199
Query: 56 SNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM 115
S D G + L L R F S+ Y+ GD+ VA+GW+ DV A R
Sbjct: 200 STKAD-DYTGPATDL---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRA 255
Query: 116 S------NVAVVVPKSGASLWADLWAIPAASR 141
NV +PK GA + D++A+PA ++
Sbjct: 256 KEAKNGVNVTYTIPKEGALAFFDVFAMPADAK 287
>gi|407789271|ref|ZP_11136373.1| polyamine transport protein [Gallaecimonas xiamenensis 3-C-1]
gi|407207249|gb|EKE77192.1| polyamine transport protein [Gallaecimonas xiamenensis 3-C-1]
Length = 416
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 23/189 (12%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP + W ++ P+ + +S +++P E++ + L Y+G + NS +
Sbjct: 202 APTDTWALVFDPKYMSKLSQCGVSFLDAPSEILPAALNYLGLNPNSED-----PADYAKA 256
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
+ L+ +A + S+ Y+ GD+ +A+G+S DVL A R V+ V+PK
Sbjct: 257 EAMLSKVAPYVTYYHSSKYIDDLANGDICIAIGFSGDVLQAATRADEAKNGVQVSYVIPK 316
Query: 125 SGASLWADLWAIP--AASRLETKQIGGRVRGPSPL--IHQWIEFCLQTARALPFKQEVI- 179
GA +W D+ AIP A + E + + P+ + + ++ + A A P ++ I
Sbjct: 317 EGAGMWFDMMAIPVDANNADEAYKFLNYMLEPANIARVSNFVSYANGNAAATPLVEDAIR 376
Query: 180 --PGASPSA 186
PG P+A
Sbjct: 377 NNPGVYPTA 385
>gi|402842571|ref|ZP_10890983.1| putrescine-binding periplasmic protein [Klebsiella sp. OBRC7]
gi|423102198|ref|ZP_17089900.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5242]
gi|376390094|gb|EHT02781.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5242]
gi|402279513|gb|EJU28298.1| putrescine-binding periplasmic protein [Klebsiella sp. OBRC7]
Length = 370
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 81/179 (45%), Gaps = 19/179 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P E+ +VL Y+G NS D G +
Sbjct: 155 APLDSWDLVMKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYYIPK 270
Query: 125 SGASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH--QWIEFCLQTARALPFKQEVI 179
GA + D++A+P A ++ E Q + P + H + + ++P E I
Sbjct: 271 EGALAFFDVFAMPADAKNKDEAYQFLNYLMRPDVIAHISDHVYYANGNKASVPLVSEAI 329
>gi|421615517|ref|ZP_16056541.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri KOS6]
gi|409782590|gb|EKN62145.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri KOS6]
Length = 361
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 92/216 (42%), Gaps = 41/216 (18%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
I+ W ++ PE A + I+ ++S E+I ++L Y+G NS N A ++
Sbjct: 149 IDSWAVIFEPENAAKLASCGIAFLDSADEMIPAMLNYLGLDPNSEN-----AADYRKAEE 203
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSG 126
L + R F S+ Y+ G++ VA G+S DV A R +A +PK G
Sbjct: 204 KLLAVRPHVRYFHSSKYISDLANGNICVAAGFSGDVFQAAARAEEAGKGVEIAYAIPKEG 263
Query: 127 ASLWADLWAIPA-ASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPS 185
+LW D+ AIPA AS ++ H +I + L + EVI S
Sbjct: 264 GNLWFDMLAIPADASNVDEA-------------HAFINYLL--------RPEVIAAVSDY 302
Query: 186 ALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILAR 221
EL+ + QD ++ PP E+L R
Sbjct: 303 VGYANPNLKASELMDQEVRQDASV---YPPQEVLDR 335
>gi|398968596|ref|ZP_10682419.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM30]
gi|398143680|gb|EJM32551.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM30]
Length = 362
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 65/133 (48%), Gaps = 18/133 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W L+ PE + +SM++S EV ++L YMG S N D + A +
Sbjct: 150 IDSWAVLFEPENLKKLTQCGVSMMDSADEVFPAILNYMGMDPRSENPEDYKKA------E 203
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
+ L + F S+ Y+ GD+ VA G+S DV A R N+A +PK
Sbjct: 204 EKLLSIRPYITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKE 263
Query: 126 GASLWADLWAIPA 138
GA+LW DL AIPA
Sbjct: 264 GANLWFDLLAIPA 276
>gi|395227557|ref|ZP_10405883.1| putrescine ABC transporter periplasmic substrate-binding protein
[Citrobacter sp. A1]
gi|421844409|ref|ZP_16277567.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Citrobacter freundii ATCC 8090 = MTCC
1658]
gi|424728739|ref|ZP_18157344.1| putrescine abc transporter periplasmic substrate-binding protein
[Citrobacter sp. L17]
gi|394718885|gb|EJF24506.1| putrescine ABC transporter periplasmic substrate-binding protein
[Citrobacter sp. A1]
gi|411774564|gb|EKS58054.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Citrobacter freundii ATCC 8090 = MTCC
1658]
gi|422896610|gb|EKU36392.1| putrescine abc transporter periplasmic substrate-binding protein
[Citrobacter sp. L17]
Length = 370
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N++ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|420335058|ref|ZP_14836674.1| putrescine-binding periplasmic protein [Shigella flexneri K-315]
gi|391266552|gb|EIQ25501.1| putrescine-binding periplasmic protein [Shigella flexneri K-315]
Length = 370
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVATGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|415771503|ref|ZP_11485362.1| putrescine-binding periplasmic protein [Escherichia coli 3431]
gi|315619861|gb|EFV00380.1| putrescine-binding periplasmic protein [Escherichia coli 3431]
Length = 370
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPA------VKRMSNVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A K NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNCAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|442556116|ref|YP_007365941.1| spermidine/putrescine-binding periplasmic protein [Lawsonia
intracellularis N343]
gi|441493563|gb|AGC50257.1| spermidine/putrescine-binding periplasmic protein [Lawsonia
intracellularis N343]
Length = 345
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 7/129 (5%)
Query: 10 FRKHNLAP--IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGK 67
F K + P I + DL RPE GR+ + + R+ G LK G S N+ N D ++ G
Sbjct: 135 FNKKVVDPTVITSFNDLNRPEFKGRVLLSDDMRDTFGVALKVRGYSVNTTNPD-EIKAGY 193
Query: 68 ISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGA 127
+QQ L + R+FD T +AF +V + W+ D A+K N+ + PK G
Sbjct: 194 EWLQQ----LKPEIRVFDITATKQAFIGEEVLAGISWNGDAFIAMKENPNLQFIFPKEGF 249
Query: 128 SLWADLWAI 136
LW D ++I
Sbjct: 250 ILWIDNFSI 258
>gi|406671762|ref|ZP_11079001.1| hypothetical protein HMPREF9706_01261 [Facklamia hominis CCUG
36813]
gi|405581012|gb|EKB55071.1| hypothetical protein HMPREF9706_01261 [Facklamia hominis CCUG
36813]
Length = 357
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 78/138 (56%), Gaps = 13/138 (9%)
Query: 7 KSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN-SNNIDLQVAG 65
SKF I+ W DLW+PEL G++ M++ REV+G L+ G S N +++ LQ +
Sbjct: 146 NSKFIDE--GDIQSWDDLWKPELRGKVMMIDGAREVLGIGLQSQGWSLNETDSQRLQKSA 203
Query: 66 GKI-SVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVP 123
K+ ++ N+ ALLA++ +++ + + +AV +S + A++ N+ +VP
Sbjct: 204 DKMKTLMPNIQALLADEIKMY--------LAMEESPIAVTYSGEAAMAMEENENLCYLVP 255
Query: 124 KSGASLWADLWAIPAASR 141
+ G+++W D AIP ++
Sbjct: 256 QEGSNIWFDNLAIPKGAK 273
>gi|357050375|ref|ZP_09111575.1| hypothetical protein HMPREF9478_01558 [Enterococcus saccharolyticus
30_1]
gi|355381460|gb|EHG28584.1| hypothetical protein HMPREF9478_01558 [Enterococcus saccharolyticus
30_1]
Length = 357
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 105/232 (45%), Gaps = 34/232 (14%)
Query: 16 APIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNS-NNIDLQVAGGKI-SVQQN 73
I++W DLW+PEL I +++ REVIG L +G S NS ++ L A K+ + N
Sbjct: 153 GEIKEWDDLWKPELKDSIMLIDGAREVIGLGLNSLGYSLNSKDDKQLTAAFNKLRKMTPN 212
Query: 74 L-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWAD 132
+ A++A++ +++ + + VAV +S + + ++ V+P G++LW D
Sbjct: 213 IKAIVADEIKMYMANE--------EASVAVTFSGEAADMMYENEHIHYVIPSEGSNLWFD 264
Query: 133 LWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLV 192
IP S+ E + ++ F L+ A E I ++P+ + L
Sbjct: 265 NMVIPKTSKNEEGA------------YAFLNFMLEPENAAQ-NAEYIGYSTPN--KKALA 309
Query: 193 KLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVADLQ 244
LP+E+ +QD P E++ E E L L Y L +L+
Sbjct: 310 LLPDEI-----TQDKQF---YPSDELMKHLEVYENLGAQYLGIYNDLFLELK 353
>gi|392982666|ref|YP_006481253.1| polyamine transporter PotD [Pseudomonas aeruginosa DK2]
gi|419754797|ref|ZP_14281155.1| polyamine transporter PotD [Pseudomonas aeruginosa PADK2_CF510]
gi|384398615|gb|EIE45020.1| polyamine transporter PotD [Pseudomonas aeruginosa PADK2_CF510]
gi|392318171|gb|AFM63551.1| polyamine transporter PotD [Pseudomonas aeruginosa DK2]
Length = 353
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 32/206 (15%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRISMVNSPREVIGSVLKYMGASYNSN 57
++ Y K++ K + P DW ++ P ++ GR+++++ P+E+ G+ LKY+G S +N
Sbjct: 128 LVGYNKTELDKLGIDPA-DWSVIFDPAVLEKIKGRVTVMDDPQELFGAALKYLGHS--AN 184
Query: 58 NIDLQVAGGKISVQQNLALLANQA-RLFDSTHYLKAFGIGDVWVAVGWSSDVL------P 110
+ D Q Q L L A + F+S+ Y+K +G++WVA G+SSD+
Sbjct: 185 DTDPQ----HWKEAQALILAAKPSWAAFNSSSYIKELTLGNIWVAHGYSSDMYQARADAE 240
Query: 111 AVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTAR 170
A R V +P+ GA L D I S + P L +++I+F L
Sbjct: 241 AAGRAFKVDFALPRQGAVLAIDNMVIHKGS-----------KNPD-LAYRFIDFMLDGRN 288
Query: 171 ALPFKQEVIPGASPSALETTLVKLPE 196
A ++ G +P+A +K PE
Sbjct: 289 ASELTNQIGTG-TPNAAALPFIK-PE 312
>gi|37675937|ref|NP_936333.1| spermidine/putrescine ABC transporter substrate-binding protein
[Vibrio vulnificus YJ016]
gi|37200477|dbj|BAC96303.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio vulnificus
YJ016]
Length = 360
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 16 APIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLA 75
AP+ W DLW + A ++ +++ R+V G LK G S N+ N D ++ ++L
Sbjct: 158 APVTRWADLWDKKYAQQVMLIDDIRDVFGMALKLNGYSINTKNED-EIK----KAYESLV 212
Query: 76 LLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWA 135
L N L++S + G+ V + W+ + M + V+P+ GA +W D +
Sbjct: 213 ALKNNVLLYNSDAPQVPYVSGETSVGMQWNGNAYQGQVEMPELKFVMPEEGAVMWMDNFT 272
Query: 136 IPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG-ASPSALETTLVKL 194
IP+ S+ + L H++I F Q + E++ SA L
Sbjct: 273 IPSGSKHKE------------LAHKFINFMYQPEH----QAEIVNSLGYASATNAGRALL 316
Query: 195 PEELLKGKPSQDTNLIVGVPPAEI-LARCEFLEPLSEATLSDYE 237
P+E LK P+ + PA+ + + EF+ + LS YE
Sbjct: 317 PDE-LKNNPT--------IFPADADVKKGEFINDVGPEALSIYE 351
>gi|398907683|ref|ZP_10654002.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM50]
gi|398171118|gb|EJM59030.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM50]
Length = 362
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 63/133 (47%), Gaps = 18/133 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W + PE + +SM++S EV +VL YMG S N D + A K
Sbjct: 150 IDSWAVFFEPENLKKLSQCGVSMMDSADEVFPAVLNYMGMDPRSENPADFKKAEAK---- 205
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
L + F S+ Y+ GD+ VA G+S DV A R N+A +PK
Sbjct: 206 --LMTIRPYITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYSIPKE 263
Query: 126 GASLWADLWAIPA 138
G++LW DL AIPA
Sbjct: 264 GSNLWFDLLAIPA 276
>gi|260597254|ref|YP_003209825.1| putrescine ABC transporter periplasmic binding protein [Cronobacter
turicensis z3032]
gi|260216431|emb|CBA29533.1| Putrescine-binding periplasmic protein [Cronobacter turicensis
z3032]
Length = 393
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 17/156 (10%)
Query: 17 PIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQ 71
P+ W + +PE + +S +++P E+ +VL Y+G NS+ D +G +
Sbjct: 179 PLNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYSGAATDL- 236
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
L L R F S+ Y+ GD+ VA+GW+ DV A R N++ +PK
Sbjct: 237 --LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNISYTIPKE 294
Query: 126 GASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH 159
GA + D++A+P A ++ E Q + P + H
Sbjct: 295 GALAFFDVFAMPADAKNKDEAYQFLNYLMRPDVMAH 330
>gi|257870119|ref|ZP_05649772.1| extracellular solute-binding protein [Enterococcus gallinarum EG2]
gi|257804283|gb|EEV33105.1| extracellular solute-binding protein [Enterococcus gallinarum EG2]
Length = 357
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 105/232 (45%), Gaps = 34/232 (14%)
Query: 16 APIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNS-NNIDLQVAGGKI-SVQQN 73
I++W DLW+PEL I +++ REVIG L +G S NS ++ L A K+ + N
Sbjct: 153 GEIKEWDDLWKPELKDSIMLIDGAREVIGLGLNSLGYSLNSKDDKQLTAAFNKLRKMTPN 212
Query: 74 L-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWAD 132
+ A++A++ +++ + + VAV +S + + ++ V+P G++LW D
Sbjct: 213 IKAIVADEIKMYMANE--------EASVAVTFSGEAADMMYENEHIHYVIPSEGSNLWFD 264
Query: 133 LWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLV 192
IP S+ E + ++ F L+ A E I ++P+ + L
Sbjct: 265 NMVIPKTSKNEEGA------------YAFLNFMLEPENAAQ-NAEYIGYSTPN--KKALA 309
Query: 193 KLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVADLQ 244
LP+E+ +QD P E++ E E L L Y L +L+
Sbjct: 310 LLPDEI-----TQDKQF---YPSDELMKHLEVYENLGAQYLGIYNDLFLELK 353
>gi|387813512|ref|YP_005428994.1| putrescine ABC transporter periplasmic-binding protein
[Marinobacter hydrocarbonoclasticus ATCC 49840]
gi|381338524|emb|CCG94571.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Marinobacter hydrocarbonoclasticus ATCC
49840]
Length = 368
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 72/142 (50%), Gaps = 22/142 (15%)
Query: 14 NLAPIEDWKDLWRPELAGR-------ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGG 66
+ AP + W ++ PE+ G+ I+M++S E++ + + Y+G NSNN D GG
Sbjct: 150 DTAPTDSWALVFDPEVTGKLAAGGCGIAMLDSGEEMVRAAMAYIGLDPNSNNADDIKKGG 209
Query: 67 KI--SVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------V 118
++ +V+ N+ F S+ Y+ GD+ VA G+S D+L A R +
Sbjct: 210 EVIKAVRPNIT-------YFHSSRYIGDLANGDLCVAAGYSGDILQAAARAEEAENGNVI 262
Query: 119 AVVVPKSGASLWADLWAIPAAS 140
+PK GA LW D+ IPA +
Sbjct: 263 RYTIPKEGAVLWFDMMTIPAGA 284
>gi|152988127|ref|YP_001346915.1| polyamine transport protein PotD [Pseudomonas aeruginosa PA7]
gi|150963285|gb|ABR85310.1| polyamine transport protein PotD [Pseudomonas aeruginosa PA7]
Length = 353
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 32/206 (15%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRISMVNSPREVIGSVLKYMGASYNSN 57
++ Y K++ K + P DW ++ P ++ GR+++++ P+E+ G+ LKY+G S +N
Sbjct: 128 LVGYNKTELDKLGIDPA-DWSVIFDPAVLEKIKGRVTVMDDPQELFGAALKYLGHS--AN 184
Query: 58 NIDLQVAGGKISVQQNLALLANQA-RLFDSTHYLKAFGIGDVWVAVGWSSDVL------P 110
+ D Q Q L L A F+S+ Y+K +G++WVA G+SSD+
Sbjct: 185 DTDPQ----HWKEAQALILAAKPYWAAFNSSSYIKELTLGNIWVAHGYSSDMYQARADAE 240
Query: 111 AVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTAR 170
A R V +P+ GA L D I S R P L +++I+F L
Sbjct: 241 AAGRAFKVDFALPRQGAVLAIDSMVIHKGS-----------RNPD-LAYRFIDFMLDGRN 288
Query: 171 ALPFKQEVIPGASPSALETTLVKLPE 196
A ++ G +P+A ++ PE
Sbjct: 289 ASELTNQIGTG-TPNAAAQPFIR-PE 312
>gi|417711617|ref|ZP_12360616.1| putrescine-binding periplasmic protein [Shigella flexneri K-272]
gi|333008839|gb|EGK28299.1| putrescine-binding periplasmic protein [Shigella flexneri K-272]
Length = 370
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S ++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFQDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|417254724|ref|ZP_12046475.1| putrescine-binding periplasmic protein [Escherichia coli 4.0967]
gi|419288390|ref|ZP_13830500.1| potF [Escherichia coli DEC11A]
gi|419293742|ref|ZP_13835797.1| potF [Escherichia coli DEC11B]
gi|378135268|gb|EHW96580.1| potF [Escherichia coli DEC11A]
gi|378145241|gb|EHX06407.1| potF [Escherichia coli DEC11B]
gi|386215006|gb|EII31503.1| putrescine-binding periplasmic protein [Escherichia coli 4.0967]
Length = 370
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVLFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|254506754|ref|ZP_05118894.1| spermidine/putrescine-binding periplasmic protein [Vibrio
parahaemolyticus 16]
gi|219550335|gb|EED27320.1| spermidine/putrescine-binding periplasmic protein [Vibrio
parahaemolyticus 16]
Length = 344
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 28/221 (12%)
Query: 17 PIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLAL 76
PI W LW + A ++ +++ R+V G LK G S NSNN + ++ ++L
Sbjct: 143 PITKWAQLWDAKYAQQVMLIDDIRDVFGMALKLNGHSINSNN-EQEIK----QAYESLVA 197
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
L + L++S + G+ + + W+ + M+ + V+P+ GA LW D + I
Sbjct: 198 LKDNVLLYNSDAPQMPYVAGETALGMQWNGNAYQGQAEMAELKFVMPEEGAVLWMDNFTI 257
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPE 196
P+ S+ L HQ+I F Q + + E++ +++ + L
Sbjct: 258 PSGSQ------------NKALAHQFIRFMYQPQQ----QAEIVNSLGYASVTQSGRALLV 301
Query: 197 ELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
+ LK N P E + + EF+ + TL+ YE
Sbjct: 302 DELK-------NNATIFPSVEDIQKGEFINDVGSETLAVYE 335
>gi|383190431|ref|YP_005200559.1| spermidine/putrescine-binding periplasmic protein [Rahnella
aquatilis CIP 78.65 = ATCC 33071]
gi|371588689|gb|AEX52419.1| spermidine/putrescine-binding periplasmic protein [Rahnella
aquatilis CIP 78.65 = ATCC 33071]
Length = 369
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 17/138 (12%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P E+ +VL Y+ NS A
Sbjct: 154 APVDSWDLVLKPENLEKLKSCGVSFLDAPAEIYATVLNYLHLDPNSTK-----ASDYTGA 208
Query: 71 QQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVP 123
+L L L R F S+ Y+ GD+ VA+GW+ DV+ A R NVA +P
Sbjct: 209 ANDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVMQAANRAKEAKNGVNVAYSIP 268
Query: 124 KSGASLWADLWAIPAASR 141
K GA + D++AIPA ++
Sbjct: 269 KEGALAFFDVFAIPADAK 286
>gi|429093187|ref|ZP_19155791.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter dublinensis 1210]
gi|426741998|emb|CCJ81904.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter dublinensis 1210]
Length = 281
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS+ D +G +
Sbjct: 66 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYSGAATDL 124
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N++ +PK
Sbjct: 125 ---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISYSIPK 181
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 182 EGALAFFDVFAMPADAK 198
>gi|157146493|ref|YP_001453812.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Citrobacter koseri ATCC BAA-895]
gi|157083698|gb|ABV13376.1| hypothetical protein CKO_02253 [Citrobacter koseri ATCC BAA-895]
Length = 370
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVDSWDLVLKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N++ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|389876148|ref|YP_006369713.1| PotF [Tistrella mobilis KA081020-065]
gi|388526932|gb|AFK52129.1| PotF [Tistrella mobilis KA081020-065]
Length = 379
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 29/209 (13%)
Query: 6 KKSKFRKHNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNID 60
K K R AP++ W+ ++ PE+ + +S+++SP E ++L Y+G + + ++
Sbjct: 153 KMVKERLGENAPLDSWRLIFDPEVVSKLADCGVSVMDSPDETFPAMLNYLGLDPDGHKVE 212
Query: 61 L--QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM--- 115
+VA + ++ ++ R F ++ Y+ G+V VA+G+S D+L A R
Sbjct: 213 DVDKVAEAYMKIRPHI-------RKFHNSQYINDLANGEVCVAMGYSGDILQARDRAQEA 265
Query: 116 ---SNVAVVVPKSGASLWADLWAIPA-ASRLETKQIG-GRVRGP--SPLIHQWIEFCLQT 168
+ + V+P GA LW D+ AIPA A E + P + I ++ +
Sbjct: 266 DNGNEIVYVIPSEGAQLWFDMLAIPADAPHPENAHTFINYILEPKVTAAISDYVAYANAN 325
Query: 169 ARALPFKQEVI---PGASPSALETTLVKL 194
A+A P E + PG PS E T+ +L
Sbjct: 326 AKATPLVSEDVRNDPGIYPS--EETMNRL 352
>gi|392978294|ref|YP_006476882.1| putrescine ABC transporter periplasmic-binding protein
[Enterobacter cloacae subsp. dissolvens SDM]
gi|392324227|gb|AFM59180.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Enterobacter cloacae subsp. dissolvens
SDM]
Length = 370
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 19/177 (10%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
++ W + +PE + +S +++P E+ +VL Y+G NSN D G +
Sbjct: 157 LDSWDVVLKPENLAKLKSCGVSFLDAPEEIFATVLNYLGKDPNSNKAD-DYTGPATDL-- 213
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSG 126
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK G
Sbjct: 214 -LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEG 272
Query: 127 ASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH--QWIEFCLQTARALPFKQEVI 179
A + D++A+P A ++ E Q + P + H + + +LP E I
Sbjct: 273 ALAFFDVFAMPADAKNKDEAYQFLNYLMRPEVIAHISDHVYYANGNKASLPLISEEI 329
>gi|423113485|ref|ZP_17101176.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5245]
gi|376388854|gb|EHT01547.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5245]
Length = 370
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 17/157 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P E+ +VL Y+G NS D G +
Sbjct: 155 APLDSWDLVMKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSAKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPK 270
Query: 125 SGASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH 159
GA + D++A+P A ++ E Q + P + H
Sbjct: 271 EGALAFFDVFAMPADAKNKEEAYQFLNYLMRPDVIAH 307
>gi|120555050|ref|YP_959401.1| extracellular solute-binding protein [Marinobacter aquaeolei VT8]
gi|120324899|gb|ABM19214.1| extracellular solute-binding protein, family 1 [Marinobacter
aquaeolei VT8]
Length = 368
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 22/140 (15%)
Query: 16 APIEDWKDLWRPELAGR-------ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKI 68
AP + W ++ PE+ G+ I+M++S E++ + + Y+G NSNN D GG++
Sbjct: 152 APTDSWALVFDPEVTGKLAAGGCGIAMLDSGEEMVRAAMAYIGLDPNSNNADDIKKGGEV 211
Query: 69 --SVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAV 120
+V+ N+ F S+ Y+ GD+ VA G+S D+L A R +
Sbjct: 212 IKAVRPNIT-------YFHSSRYIGDLANGDLCVAAGYSGDILQAAARAEEAENGNVIRY 264
Query: 121 VVPKSGASLWADLWAIPAAS 140
+PK GA LW D+ IPA +
Sbjct: 265 TIPKEGAVLWFDMMTIPAGA 284
>gi|309782676|ref|ZP_07677397.1| polyamine ABC transporter protein [Ralstonia sp. 5_7_47FAA]
gi|404397371|ref|ZP_10989162.1| hypothetical protein HMPREF0989_02854 [Ralstonia sp. 5_2_56FAA]
gi|308918454|gb|EFP64130.1| polyamine ABC transporter protein [Ralstonia sp. 5_7_47FAA]
gi|348614022|gb|EGY63585.1| hypothetical protein HMPREF0989_02854 [Ralstonia sp. 5_2_56FAA]
Length = 370
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 90/177 (50%), Gaps = 30/177 (16%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPE----LAGRISMVNSPREVIGSVLKYMGASYNSN 57
+I Y +++ R+ L P W ++ P+ + G++++++ PREVI + L+Y G S NS
Sbjct: 144 LIGYNEARIRELGLDPTS-WSLVFDPKVLSKIRGKVTVLDDPREVIAAALRYKGYSANST 202
Query: 58 NIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPA------ 111
+ Q++ +++Q + A F+S Y++ +G++WVA+G+S+D+ A
Sbjct: 203 SA-AQLSEAIEAIRQAMPYWA----AFNSQSYIRELTVGNIWVALGYSNDIFQAKTDALN 257
Query: 112 VKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSP-LIHQWIEFCLQ 167
KR ++ + K G + D + I SR P P L H++I F LQ
Sbjct: 258 AKRPFSIKEALQKEGNGMTGDSFVI---SRT----------APHPELAHRFINFMLQ 301
>gi|51595702|ref|YP_069893.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pseudotuberculosis IP 32953]
gi|108806618|ref|YP_650534.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis Antiqua]
gi|108812810|ref|YP_648577.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis Nepal516]
gi|145599638|ref|YP_001163714.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis Pestoides F]
gi|149366690|ref|ZP_01888724.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
CA88-4125]
gi|153950739|ref|YP_001401610.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pseudotuberculosis IP 31758]
gi|162421714|ref|YP_001606071.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis Angola]
gi|165924359|ref|ZP_02220191.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Orientalis str. F1991016]
gi|165936192|ref|ZP_02224761.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Orientalis str. IP275]
gi|166009827|ref|ZP_02230725.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Antiqua str. E1979001]
gi|166211526|ref|ZP_02237561.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Antiqua str. B42003004]
gi|167399794|ref|ZP_02305312.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167419605|ref|ZP_02311358.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167424261|ref|ZP_02316014.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Mediaevalis str. K1973002]
gi|167469049|ref|ZP_02333753.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily protein [Yersinia pestis FV-1]
gi|170024955|ref|YP_001721460.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pseudotuberculosis YPIII]
gi|186894775|ref|YP_001871887.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pseudotuberculosis PB1/+]
gi|218928481|ref|YP_002346356.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis CO92]
gi|229841290|ref|ZP_04461449.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229843393|ref|ZP_04463539.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis biovar Orientalis str.
India 195]
gi|229895767|ref|ZP_04510937.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis Pestoides A]
gi|229903229|ref|ZP_04518342.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis Nepal516]
gi|270487022|ref|ZP_06204096.1| bacterial extracellular solute-binding protein [Yersinia pestis KIM
D27]
gi|294503326|ref|YP_003567388.1| putrescine-binding periplasmic protein [Yersinia pestis Z176003]
gi|384121769|ref|YP_005504389.1| putrescine-binding periplasmic protein [Yersinia pestis D106004]
gi|384125432|ref|YP_005508046.1| putrescine-binding periplasmic protein [Yersinia pestis D182038]
gi|384141038|ref|YP_005523740.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis A1122]
gi|384415312|ref|YP_005624674.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis biovar Medievalis str. Harbin 35]
gi|420546012|ref|ZP_15044054.1| putrescine-binding periplasmic protein [Yersinia pestis PY-01]
gi|420551322|ref|ZP_15048809.1| putrescine-binding periplasmic protein [Yersinia pestis PY-02]
gi|420556862|ref|ZP_15053699.1| putrescine-binding periplasmic protein [Yersinia pestis PY-03]
gi|420562420|ref|ZP_15058583.1| putrescine-binding periplasmic protein [Yersinia pestis PY-04]
gi|420567439|ref|ZP_15063123.1| putrescine-binding periplasmic protein [Yersinia pestis PY-05]
gi|420573088|ref|ZP_15068249.1| putrescine-binding periplasmic protein [Yersinia pestis PY-06]
gi|420578406|ref|ZP_15073065.1| putrescine-binding periplasmic protein [Yersinia pestis PY-07]
gi|420583781|ref|ZP_15077952.1| putrescine-binding periplasmic protein [Yersinia pestis PY-08]
gi|420588922|ref|ZP_15082586.1| putrescine-binding periplasmic protein [Yersinia pestis PY-09]
gi|420594243|ref|ZP_15087376.1| putrescine-binding periplasmic protein [Yersinia pestis PY-10]
gi|420599926|ref|ZP_15092456.1| putrescine-binding periplasmic protein [Yersinia pestis PY-11]
gi|420605403|ref|ZP_15097357.1| putrescine-binding periplasmic protein [Yersinia pestis PY-12]
gi|420610751|ref|ZP_15102191.1| putrescine-binding periplasmic protein [Yersinia pestis PY-13]
gi|420616055|ref|ZP_15106888.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-14]
gi|420621445|ref|ZP_15111640.1| putrescine-binding periplasmic protein [Yersinia pestis PY-15]
gi|420626498|ref|ZP_15116222.1| putrescine-binding periplasmic protein [Yersinia pestis PY-16]
gi|420631706|ref|ZP_15120929.1| putrescine-binding periplasmic protein [Yersinia pestis PY-19]
gi|420636814|ref|ZP_15125505.1| putrescine-binding periplasmic protein [Yersinia pestis PY-25]
gi|420642346|ref|ZP_15130505.1| putrescine-binding periplasmic protein [Yersinia pestis PY-29]
gi|420647544|ref|ZP_15135254.1| putrescine-binding periplasmic protein [Yersinia pestis PY-32]
gi|420653181|ref|ZP_15140319.1| putrescine-binding periplasmic protein [Yersinia pestis PY-34]
gi|420658704|ref|ZP_15145282.1| putrescine-binding periplasmic protein [Yersinia pestis PY-36]
gi|420663998|ref|ZP_15150017.1| putrescine-binding periplasmic protein [Yersinia pestis PY-42]
gi|420668962|ref|ZP_15154515.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-45]
gi|420674289|ref|ZP_15159368.1| putrescine-binding periplasmic protein [Yersinia pestis PY-46]
gi|420679845|ref|ZP_15164402.1| putrescine-binding periplasmic protein [Yersinia pestis PY-47]
gi|420685101|ref|ZP_15169109.1| putrescine-binding periplasmic protein [Yersinia pestis PY-48]
gi|420690277|ref|ZP_15173691.1| putrescine-binding periplasmic protein [Yersinia pestis PY-52]
gi|420696075|ref|ZP_15178772.1| putrescine-binding periplasmic protein [Yersinia pestis PY-53]
gi|420701483|ref|ZP_15183371.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-54]
gi|420707437|ref|ZP_15188236.1| putrescine-binding periplasmic protein [Yersinia pestis PY-55]
gi|420712778|ref|ZP_15193045.1| putrescine-binding periplasmic protein [Yersinia pestis PY-56]
gi|420718189|ref|ZP_15197781.1| putrescine-binding periplasmic protein [Yersinia pestis PY-58]
gi|420723771|ref|ZP_15202593.1| putrescine-binding periplasmic protein [Yersinia pestis PY-59]
gi|420729368|ref|ZP_15207586.1| putrescine-binding periplasmic protein [Yersinia pestis PY-60]
gi|420734446|ref|ZP_15212171.1| putrescine-binding periplasmic protein [Yersinia pestis PY-61]
gi|420739919|ref|ZP_15217101.1| putrescine-binding periplasmic protein [Yersinia pestis PY-63]
gi|420745304|ref|ZP_15221816.1| putrescine-binding periplasmic protein [Yersinia pestis PY-64]
gi|420751046|ref|ZP_15226754.1| putrescine-binding periplasmic protein [Yersinia pestis PY-65]
gi|420756368|ref|ZP_15231339.1| putrescine-binding periplasmic protein [Yersinia pestis PY-66]
gi|420762171|ref|ZP_15236104.1| putrescine-binding periplasmic protein [Yersinia pestis PY-71]
gi|420767417|ref|ZP_15240838.1| putrescine-binding periplasmic protein [Yersinia pestis PY-72]
gi|420772395|ref|ZP_15245313.1| putrescine-binding periplasmic protein [Yersinia pestis PY-76]
gi|420777841|ref|ZP_15250166.1| putrescine-binding periplasmic protein [Yersinia pestis PY-88]
gi|420783361|ref|ZP_15255003.1| putrescine-binding periplasmic protein [Yersinia pestis PY-89]
gi|420788694|ref|ZP_15259708.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-90]
gi|420794161|ref|ZP_15264645.1| putrescine-binding periplasmic protein [Yersinia pestis PY-91]
gi|420799283|ref|ZP_15269250.1| putrescine-binding periplasmic protein [Yersinia pestis PY-92]
gi|420804630|ref|ZP_15274064.1| putrescine-binding periplasmic protein [Yersinia pestis PY-93]
gi|420809886|ref|ZP_15278819.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-94]
gi|420815566|ref|ZP_15283914.1| putrescine-binding periplasmic protein [Yersinia pestis PY-95]
gi|420820764|ref|ZP_15288616.1| putrescine-binding periplasmic protein [Yersinia pestis PY-96]
gi|420825852|ref|ZP_15293170.1| putrescine-binding periplasmic protein [Yersinia pestis PY-98]
gi|420831629|ref|ZP_15298392.1| putrescine-binding periplasmic protein [Yersinia pestis PY-99]
gi|420836477|ref|ZP_15302761.1| putrescine-binding periplasmic protein [Yersinia pestis PY-100]
gi|420841626|ref|ZP_15307426.1| putrescine-binding periplasmic protein [Yersinia pestis PY-101]
gi|420847242|ref|ZP_15312495.1| putrescine-binding periplasmic protein [Yersinia pestis PY-102]
gi|420852680|ref|ZP_15317268.1| putrescine-binding periplasmic protein [Yersinia pestis PY-103]
gi|420858176|ref|ZP_15321956.1| putrescine-binding periplasmic protein [Yersinia pestis PY-113]
gi|421762784|ref|ZP_16199581.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis INS]
gi|51588984|emb|CAH20601.1| ABC type periplasmic putrescine/spermidine binding protein, potF
[Yersinia pseudotuberculosis IP 32953]
gi|108776458|gb|ABG18977.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
Nepal516]
gi|108778531|gb|ABG12589.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
Antiqua]
gi|115347092|emb|CAL19984.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
CO92]
gi|145211334|gb|ABP40741.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
Pestoides F]
gi|149291064|gb|EDM41139.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
CA88-4125]
gi|152962234|gb|ABS49695.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pseudotuberculosis IP 31758]
gi|162354529|gb|ABX88477.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis Angola]
gi|165915806|gb|EDR34414.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Orientalis str. IP275]
gi|165923419|gb|EDR40551.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Orientalis str. F1991016]
gi|165991223|gb|EDR43524.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Antiqua str. E1979001]
gi|166207297|gb|EDR51777.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Antiqua str. B42003004]
gi|166962346|gb|EDR58367.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167050502|gb|EDR61910.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167057110|gb|EDR66873.1| putrescine ABC transporter, periplasmic putrescine binding protein
[Yersinia pestis biovar Mediaevalis str. K1973002]
gi|169751489|gb|ACA69007.1| extracellular solute-binding protein family 1 [Yersinia
pseudotuberculosis YPIII]
gi|186697801|gb|ACC88430.1| extracellular solute-binding protein family 1 [Yersinia
pseudotuberculosis PB1/+]
gi|229678999|gb|EEO75102.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis Nepal516]
gi|229689740|gb|EEO81801.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis biovar Orientalis str.
India 195]
gi|229697656|gb|EEO87703.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229700690|gb|EEO88719.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis Pestoides A]
gi|262361365|gb|ACY58086.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
D106004]
gi|262365096|gb|ACY61653.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
D182038]
gi|270335526|gb|EFA46303.1| bacterial extracellular solute-binding protein [Yersinia pestis KIM
D27]
gi|294353785|gb|ADE64126.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
Z176003]
gi|320015816|gb|ADV99387.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis biovar Medievalis str.
Harbin 35]
gi|342856167|gb|AEL74720.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis A1122]
gi|391429137|gb|EIQ91021.1| putrescine-binding periplasmic protein [Yersinia pestis PY-01]
gi|391430413|gb|EIQ92134.1| putrescine-binding periplasmic protein [Yersinia pestis PY-02]
gi|391431954|gb|EIQ93448.1| putrescine-binding periplasmic protein [Yersinia pestis PY-03]
gi|391445044|gb|EIR05211.1| putrescine-binding periplasmic protein [Yersinia pestis PY-04]
gi|391445985|gb|EIR06067.1| putrescine-binding periplasmic protein [Yersinia pestis PY-05]
gi|391449804|gb|EIR09495.1| putrescine-binding periplasmic protein [Yersinia pestis PY-06]
gi|391461597|gb|EIR20195.1| putrescine-binding periplasmic protein [Yersinia pestis PY-07]
gi|391462641|gb|EIR21136.1| putrescine-binding periplasmic protein [Yersinia pestis PY-08]
gi|391464758|gb|EIR23010.1| putrescine-binding periplasmic protein [Yersinia pestis PY-09]
gi|391478057|gb|EIR35020.1| putrescine-binding periplasmic protein [Yersinia pestis PY-10]
gi|391479255|gb|EIR36070.1| putrescine-binding periplasmic protein [Yersinia pestis PY-12]
gi|391479435|gb|EIR36226.1| putrescine-binding periplasmic protein [Yersinia pestis PY-11]
gi|391493548|gb|EIR48888.1| putrescine-binding periplasmic protein [Yersinia pestis PY-13]
gi|391494646|gb|EIR49849.1| putrescine-binding periplasmic protein [Yersinia pestis PY-15]
gi|391497235|gb|EIR52109.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-14]
gi|391509359|gb|EIR62991.1| putrescine-binding periplasmic protein [Yersinia pestis PY-16]
gi|391510142|gb|EIR63704.1| putrescine-binding periplasmic protein [Yersinia pestis PY-19]
gi|391514371|gb|EIR67479.1| putrescine-binding periplasmic protein [Yersinia pestis PY-25]
gi|391524903|gb|EIR77080.1| putrescine-binding periplasmic protein [Yersinia pestis PY-29]
gi|391527667|gb|EIR79561.1| putrescine-binding periplasmic protein [Yersinia pestis PY-34]
gi|391528645|gb|EIR80444.1| putrescine-binding periplasmic protein [Yersinia pestis PY-32]
gi|391541013|gb|EIR91591.1| putrescine-binding periplasmic protein [Yersinia pestis PY-36]
gi|391543171|gb|EIR93528.1| putrescine-binding periplasmic protein [Yersinia pestis PY-42]
gi|391544275|gb|EIR94507.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-45]
gi|391558283|gb|EIS07178.1| putrescine-binding periplasmic protein [Yersinia pestis PY-46]
gi|391558950|gb|EIS07785.1| putrescine-binding periplasmic protein [Yersinia pestis PY-47]
gi|391560061|gb|EIS08733.1| putrescine-binding periplasmic protein [Yersinia pestis PY-48]
gi|391573487|gb|EIS20537.1| putrescine-binding periplasmic protein [Yersinia pestis PY-52]
gi|391574043|gb|EIS21001.1| putrescine-binding periplasmic protein [Yersinia pestis PY-53]
gi|391585571|gb|EIS30965.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-54]
gi|391585813|gb|EIS31176.1| putrescine-binding periplasmic protein [Yersinia pestis PY-55]
gi|391589491|gb|EIS34379.1| putrescine-binding periplasmic protein [Yersinia pestis PY-56]
gi|391602784|gb|EIS46038.1| putrescine-binding periplasmic protein [Yersinia pestis PY-60]
gi|391602825|gb|EIS46075.1| putrescine-binding periplasmic protein [Yersinia pestis PY-58]
gi|391604444|gb|EIS47452.1| putrescine-binding periplasmic protein [Yersinia pestis PY-59]
gi|391617103|gb|EIS58687.1| putrescine-binding periplasmic protein [Yersinia pestis PY-61]
gi|391617910|gb|EIS59408.1| putrescine-binding periplasmic protein [Yersinia pestis PY-63]
gi|391624218|gb|EIS64885.1| putrescine-binding periplasmic protein [Yersinia pestis PY-64]
gi|391628962|gb|EIS68955.1| putrescine-binding periplasmic protein [Yersinia pestis PY-65]
gi|391640283|gb|EIS78856.1| putrescine-binding periplasmic protein [Yersinia pestis PY-71]
gi|391641901|gb|EIS80245.1| putrescine-binding periplasmic protein [Yersinia pestis PY-66]
gi|391642643|gb|EIS80890.1| putrescine-binding periplasmic protein [Yersinia pestis PY-72]
gi|391652353|gb|EIS89417.1| putrescine-binding periplasmic protein [Yersinia pestis PY-76]
gi|391657874|gb|EIS94341.1| putrescine-binding periplasmic protein [Yersinia pestis PY-88]
gi|391662913|gb|EIS98807.1| putrescine-binding periplasmic protein [Yersinia pestis PY-89]
gi|391665174|gb|EIT00787.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-90]
gi|391671686|gb|EIT06596.1| putrescine-binding periplasmic protein [Yersinia pestis PY-91]
gi|391683384|gb|EIT17167.1| putrescine-binding periplasmic protein [Yersinia pestis PY-93]
gi|391684769|gb|EIT18392.1| putrescine-binding periplasmic protein [Yersinia pestis PY-92]
gi|391685532|gb|EIT19059.1| bacterial extracellular solute-binding family protein [Yersinia
pestis PY-94]
gi|391697257|gb|EIT29662.1| putrescine-binding periplasmic protein [Yersinia pestis PY-95]
gi|391700935|gb|EIT32985.1| putrescine-binding periplasmic protein [Yersinia pestis PY-96]
gi|391702206|gb|EIT34126.1| putrescine-binding periplasmic protein [Yersinia pestis PY-98]
gi|391711411|gb|EIT42379.1| putrescine-binding periplasmic protein [Yersinia pestis PY-99]
gi|391717995|gb|EIT48287.1| putrescine-binding periplasmic protein [Yersinia pestis PY-100]
gi|391718497|gb|EIT48738.1| putrescine-binding periplasmic protein [Yersinia pestis PY-101]
gi|391729174|gb|EIT58194.1| putrescine-binding periplasmic protein [Yersinia pestis PY-102]
gi|391732267|gb|EIT60859.1| putrescine-binding periplasmic protein [Yersinia pestis PY-103]
gi|391736137|gb|EIT64190.1| putrescine-binding periplasmic protein [Yersinia pestis PY-113]
gi|411176990|gb|EKS47005.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis INS]
Length = 369
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS A S
Sbjct: 154 APVNSWDLVLKPENLEKLKSCGVSFLDAPSEIFATVLNYLGKDPNST----LTADYTGSA 209
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VAVGW+ D++ A R NVA +PK
Sbjct: 210 TDLLLKLRPNIRYFHSSQYINDLANGDICVAVGWAGDIMQASNRAKEAKNGVNVAYSIPK 269
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+P ++
Sbjct: 270 EGALAFFDVFAMPTDAK 286
>gi|404403552|ref|ZP_10995136.1| putrescine ABC transporter periplasmic protein [Pseudomonas
fuscovaginae UPB0736]
Length = 364
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 30/162 (18%)
Query: 18 IEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W L+ PE ++S ++S E++ +VL YMG S NS N D ++A +
Sbjct: 152 IDSWAMLFEPENIKKLSSCGVAFLDSADEMLPAVLNYMGLSPNSTNEKDYKLA------E 205
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
+ L + F+S+ Y+ G++ VA G+S D+ A KR ++A V+PK
Sbjct: 206 EKLLKVRPYVTYFNSSKYISDLANGEICVAAGFSGDIFQAKKRAEEAKKGVDIAYVIPKE 265
Query: 126 GASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQ 167
G +LW D+ AIP + G V+ H +I + LQ
Sbjct: 266 GGNLWFDMLAIP--------KDAGNVKEA----HAFINYLLQ 295
>gi|375264908|ref|YP_005022351.1| extracellular solute-binding protein [Vibrio sp. EJY3]
gi|369840232|gb|AEX21376.1| extracellular solute-binding protein [Vibrio sp. EJY3]
Length = 369
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W +++PE + + +N+P E++ + L Y+G NS + + K
Sbjct: 155 APVNSWDLVFKPENMEKLAKCGVGFLNAPSEIMAASLNYIGKDPNSTDPN----DYKKDA 210
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
+ L + F S+ Y+ GD+ VA+GWS DVL A R + +A +PK
Sbjct: 211 LELLKTVRPYVTYFHSSQYINDLANGDICVAIGWSGDVLQAADRAAEADNGVEIAYSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA W DL AIP ++
Sbjct: 271 EGALAWFDLMAIPKDAK 287
>gi|357026312|ref|ZP_09088415.1| family 1 extracellular solute-binding protein [Mesorhizobium
amorphae CCNWGS0123]
gi|355541823|gb|EHH10996.1| family 1 extracellular solute-binding protein [Mesorhizobium
amorphae CCNWGS0123]
Length = 365
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 66/132 (50%), Gaps = 16/132 (12%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
I+ W + PE + + +++SP ++I + LKY+G NS + D +A ++
Sbjct: 153 IDSWDAFFNPESLAKLKDCGVYVLDSPADIIPAALKYLGLDPNSTSPD-DIA----KAEE 207
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPA------VKRMSNVAVVVPKSG 126
L + R F S+ Y+ A GD+ +AVGWS DV A K+ + VPK G
Sbjct: 208 TLLKIRPYIRKFHSSEYINALANGDICLAVGWSGDVFQARNRAVEAKQGVEIGYAVPKEG 267
Query: 127 ASLWADLWAIPA 138
A +W D AIPA
Sbjct: 268 AQMWFDQMAIPA 279
>gi|398859600|ref|ZP_10615273.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM79]
gi|398236561|gb|EJN22339.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM79]
Length = 362
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 63/133 (47%), Gaps = 18/133 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W + PE + +SM++S EV +VL YMG S N D + A K
Sbjct: 150 IDSWAVFFEPENLKKLSQCGVSMMDSADEVFPAVLNYMGMDPRSENPEDFKKAEAK---- 205
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
L + F S+ Y+ GD+ VA G+S DV A R N+A +PK
Sbjct: 206 --LLTIRPYITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKE 263
Query: 126 GASLWADLWAIPA 138
G++LW DL AIPA
Sbjct: 264 GSNLWFDLLAIPA 276
>gi|304415318|ref|ZP_07396003.1| periplasmic-binding component of putrescine ABC transporter
[Candidatus Regiella insecticola LSR1]
gi|304282836|gb|EFL91314.1| periplasmic-binding component of putrescine ABC transporter
[Candidatus Regiella insecticola LSR1]
Length = 379
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 19/154 (12%)
Query: 2 VIAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASY 54
VI Y K ++ AP W + + E + +S +++P E+ +VL Y+G
Sbjct: 148 VIGYNVEKIKEALGEDAPTNSWDLVLKAENLAKLKNCGVSFLDAPSEIFATVLHYLGKDA 207
Query: 55 NSNNIDLQVAGGKI-SVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVK 113
NS Q+A S + L L R F S+ Y+ GD+ VAVGW+ D++ A
Sbjct: 208 NS-----QLASDYTGSATELLLTLRPNIRYFHSSKYINDLANGDICVAVGWNGDIVQAAN 262
Query: 114 RMS------NVAVVVPKSGASLWADLWAIPAASR 141
R+ N+A +PK GA + D++A+PA ++
Sbjct: 263 RIKEANNGVNIAYSIPKEGALVTFDVFAMPADAK 296
>gi|296103163|ref|YP_003613309.1| putrescine transporter periplasmic-binding component [Enterobacter
cloacae subsp. cloacae ATCC 13047]
gi|295057622|gb|ADF62360.1| putrescine transporter periplasmic-binding component [Enterobacter
cloacae subsp. cloacae ATCC 13047]
Length = 370
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 19/177 (10%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
++ W + +PE + +S +++P E+ +VL Y+G NSN D G +
Sbjct: 157 LDSWDVVLKPENLAKLKSCGVSFLDAPEEIFATVLNYLGKDPNSNKAD-DYTGPATDL-- 213
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSG 126
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK G
Sbjct: 214 -LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEG 272
Query: 127 ASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH--QWIEFCLQTARALPFKQEVI 179
A + D++A+P A ++ E Q + P + H + + +LP E I
Sbjct: 273 ALAFFDVFAMPADAKNKDEAYQFLNYLMRPEVIAHISDHVYYANGNKASLPLISEEI 329
>gi|398882696|ref|ZP_10637662.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM60]
gi|398198363|gb|EJM85321.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM60]
Length = 362
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 67/134 (50%), Gaps = 20/134 (14%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKI-SV 70
I+ W L+ PE + +SM++S EV ++L YMG S N D + A K+ S+
Sbjct: 150 IDSWAVLFEPENIKKLSQCGVSMMDSADEVFPAILNYMGMDPRSENPEDYKKAEAKLLSI 209
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
+ + F S+ Y+ GD+ VA G+S DV A R N+A +PK
Sbjct: 210 RPYITY-------FHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPK 262
Query: 125 SGASLWADLWAIPA 138
G++LW DL AIPA
Sbjct: 263 EGSNLWFDLLAIPA 276
>gi|398879044|ref|ZP_10634147.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM67]
gi|398197590|gb|EJM84567.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM67]
Length = 362
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 67/134 (50%), Gaps = 20/134 (14%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKI-SV 70
I+ W L+ PE + +SM++S EV ++L YMG S N D + A K+ S+
Sbjct: 150 IDSWAVLFEPENIKKLSQCGVSMMDSADEVFPAILNYMGMDPRSENPEDYKKAEAKLLSI 209
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
+ + F S+ Y+ GD+ VA G+S DV A R N+A +PK
Sbjct: 210 RPYITY-------FHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPK 262
Query: 125 SGASLWADLWAIPA 138
G++LW DL AIPA
Sbjct: 263 EGSNLWFDLLAIPA 276
>gi|429095480|ref|ZP_19157586.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter dublinensis 582]
gi|426281820|emb|CCJ83699.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter dublinensis 582]
Length = 370
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS+ D +G +
Sbjct: 155 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYSGAATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N++ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISYSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGALAFFDVFAMPADAK 287
>gi|352106290|ref|ZP_08961341.1| extracellular solute-binding protein [Halomonas sp. HAL1]
gi|350597938|gb|EHA14063.1| extracellular solute-binding protein [Halomonas sp. HAL1]
Length = 367
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 69/136 (50%), Gaps = 18/136 (13%)
Query: 16 APIEDWKDLWRPELAGRIS-------MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKI 68
AP++ W L+ PE+ G +S M++S E++ + Y+G S NID A G++
Sbjct: 151 APLDSWALLFDPEITGALSEAGCGLSMLDSADEMLSPAMAYLGLDPLSENIDDIEAAGEL 210
Query: 69 SVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVV 122
+A + + F S+ Y+ GD+ VA G+S DV A R ++ +
Sbjct: 211 -----IASVRDDMTYFHSSRYVSDLANGDICVAAGYSGDVFQAAARAEEAGRDFSIGYSI 265
Query: 123 PKSGASLWADLWAIPA 138
PK GA+LW D+ A+PA
Sbjct: 266 PKEGAALWFDMMAVPA 281
>gi|22126728|ref|NP_670151.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Yersinia pestis KIM10+]
gi|45441089|ref|NP_992628.1| putrescine ABC transporter periplasmic-binding protein [Yersinia
pestis biovar Microtus str. 91001]
gi|21959748|gb|AAM86402.1|AE013887_9 periplasmic putrescine-binding protein of putrescine ABC
transporter [Yersinia pestis KIM10+]
gi|45435948|gb|AAS61505.1| putrescine-binding periplasmic protein precursor [Yersinia pestis
biovar Microtus str. 91001]
Length = 408
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS A S
Sbjct: 193 APVNSWDLVLKPENLEKLKSCGVSFLDAPSEIFATVLNYLGKDPNST----LTADYTGSA 248
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VAVGW+ D++ A R NVA +PK
Sbjct: 249 TDLLLKLRPNIRYFHSSQYINDLANGDICVAVGWAGDIMQASNRAKEAKNGVNVAYSIPK 308
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+P ++
Sbjct: 309 EGALAFFDVFAMPTDAK 325
>gi|37520928|ref|NP_924305.1| periplasmic spermidine/putrescine-binding protein [Gloeobacter
violaceus PCC 7421]
gi|35211923|dbj|BAC89300.1| glr1359 [Gloeobacter violaceus PCC 7421]
Length = 361
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 5/121 (4%)
Query: 17 PIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLAL 76
PI W+DLW P GR+ +++ EV+G L+ +G N+ + Q+A + LA
Sbjct: 153 PISRWEDLWDPAFKGRVVLLDDEFEVLGMALQTLGFDKNTKD-PAQLAKARAK----LAQ 207
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
L +LFDS A G+VW+ W+ + A + + + P G +W D WA+
Sbjct: 208 LRPNIKLFDSDSPKTALLSGEVWLGQVWNGEAALAQRENPAIRYLCPAEGCGIWHDNWAV 267
Query: 137 P 137
P
Sbjct: 268 P 268
>gi|423139332|ref|ZP_17126970.1| bacterial extracellular solute-binding protein [Salmonella enterica
subsp. houtenae str. ATCC BAA-1581]
gi|379051886|gb|EHY69777.1| bacterial extracellular solute-binding protein [Salmonella enterica
subsp. houtenae str. ATCC BAA-1581]
Length = 371
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 156 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL 214
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N+A +PK
Sbjct: 215 ---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNIAFSIPK 271
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 272 EGAMAFFDVFAMPADAK 288
>gi|161503961|ref|YP_001571073.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:- str. RSK2980]
gi|160865308|gb|ABX21931.1| hypothetical protein SARI_02053 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 371
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 156 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL 214
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N++ +PK
Sbjct: 215 ---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPK 271
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA R
Sbjct: 272 EGAMAFFDVFAMPADGR 288
>gi|429103745|ref|ZP_19165719.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter turicensis 564]
gi|426290394|emb|CCJ91832.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Cronobacter turicensis 564]
Length = 370
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 17/156 (10%)
Query: 17 PIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQ 71
P+ W + +PE + +S +++P E+ +VL Y+G NS+ D +G +
Sbjct: 156 PLNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYSGAATDL- 213
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
L L R F S+ Y+ GD+ VA+GW+ DV A R N++ +PK
Sbjct: 214 --LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNISYTIPKE 271
Query: 126 GASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH 159
GA + D++A+P A ++ E Q + P + H
Sbjct: 272 GALAFFDVFAMPADAKNKDEAYQFLNYLMRPDVMAH 307
>gi|385330681|ref|YP_005884632.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Marinobacter adhaerens HP15]
gi|311693831|gb|ADP96704.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Marinobacter adhaerens HP15]
Length = 368
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 22/140 (15%)
Query: 16 APIEDWKDLWRPELAGR-------ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKI 68
AP + W ++ PE+ G+ I+M++S E++ + + Y+G NSNN D GG++
Sbjct: 152 APTDSWALVFDPEVTGKLATGGCGIAMLDSGEEMVRAAMAYIGLDPNSNNADDIKKGGEV 211
Query: 69 --SVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAV 120
+++ N+ F S+ Y+ GD+ VA G+S D+L A R +
Sbjct: 212 IKAIRPNIT-------YFHSSRYIGDLANGDLCVAAGYSGDILQAAARAEEAENGNVIRY 264
Query: 121 VVPKSGASLWADLWAIPAAS 140
+PK GA LW D+ IPA +
Sbjct: 265 TIPKEGAVLWFDMMTIPAGA 284
>gi|238789658|ref|ZP_04633441.1| Putrescine-binding periplasmic protein [Yersinia frederiksenii ATCC
33641]
gi|238722211|gb|EEQ13868.1| Putrescine-binding periplasmic protein [Yersinia frederiksenii ATCC
33641]
Length = 369
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 15/136 (11%)
Query: 17 PIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQ 71
P+ W + +PE + +S +++P E+ +VL Y+G NS +Q +
Sbjct: 155 PVNSWDLVLKPENLEKLKSCGVSFLDAPSEIFATVLNYLGKDPNS----IQASDYTGPAT 210
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
L L R F S+ Y+ GD+ VAVGW+ DV+ A R NVA +PK
Sbjct: 211 DLLLKLRPNIRYFHSSQYINDLANGDICVAVGWAGDVMQASNRAKEAKNGVNVAYSIPKE 270
Query: 126 GASLWADLWAIPAASR 141
GA + D++A+P+ ++
Sbjct: 271 GALAFFDVFAMPSDAK 286
>gi|423119457|ref|ZP_17107141.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5246]
gi|376398515|gb|EHT11140.1| putrescine-binding periplasmic protein [Klebsiella oxytoca 10-5246]
Length = 370
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS D G +
Sbjct: 155 APLNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGALAFFDVFAMPADAK 287
>gi|386288729|ref|ZP_10065869.1| polyamine ABC transporter [gamma proteobacterium BDW918]
gi|385278284|gb|EIF42256.1| polyamine ABC transporter [gamma proteobacterium BDW918]
Length = 352
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 33/212 (15%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRISMVNSPREVIGSVLKYMGASYNSN 57
+I Y ++K + + P DW ++ P ++ G++++++ E+ G+ LKY+G S N
Sbjct: 127 LIGYNENKITELGIDP-ADWSIIFDPAVLAKIKGKVTVMDDAEELFGAALKYLGYSINDT 185
Query: 58 NIDLQVAGGKISVQQNLALLANQA-RLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS 116
N + Q + L A F+S+ Y+K +G++WVA G+SSD+ A +
Sbjct: 186 N------EKHLKEAQAVILKAKPYWAAFNSSSYIKELTVGNIWVAHGYSSDMFQARADAA 239
Query: 117 ------NVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTAR 170
V V+PK GA L D IP + R P L H +I F +
Sbjct: 240 DAGRDFTVNFVLPKQGAVLALDNMVIPK-----------KARNPE-LAHMFINFMMDPQN 287
Query: 171 ALPFKQEVIPGASPSALETTLVKLPEELLKGK 202
A ++ +P+A T + E++LK K
Sbjct: 288 AAELTT-IVGTGNPNAAATPFID--EDILKIK 316
>gi|358451127|ref|ZP_09161561.1| extracellular solute-binding protein [Marinobacter manganoxydans
MnI7-9]
gi|357224360|gb|EHJ02891.1| extracellular solute-binding protein [Marinobacter manganoxydans
MnI7-9]
Length = 368
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 22/140 (15%)
Query: 16 APIEDWKDLWRPELAGR-------ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKI 68
AP + W ++ PE+ G+ I+M++S E++ + + Y+G NSNN D GG++
Sbjct: 152 APTDSWALVFDPEVTGKLAAGGCGIAMLDSGEEMVRAAMAYIGLDPNSNNADDIRKGGEV 211
Query: 69 --SVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAV 120
+++ N+ F S+ Y+ GD+ VA G+S D+L A R +
Sbjct: 212 IKAIRPNIT-------YFHSSRYIADLANGDLCVAAGYSGDILQAAARAEEAENGNVIRY 264
Query: 121 VVPKSGASLWADLWAIPAAS 140
+PK GA LW D+ IPA +
Sbjct: 265 TIPKEGAVLWFDMMTIPAGA 284
>gi|254500570|ref|ZP_05112721.1| Bacterial extracellular solute-binding protein, putative [Labrenzia
alexandrii DFL-11]
gi|222436641|gb|EEE43320.1| Bacterial extracellular solute-binding protein, putative [Labrenzia
alexandrii DFL-11]
Length = 359
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 16/137 (11%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W L++PE A + I ++++P E+ + L Y+G +S + G
Sbjct: 145 APVDSWDLLFKPENAAKLQECGIHVLDAPTELFPAALNYLGLDPDSKD-----TGDIEKA 199
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
+ L + + F S+ Y+ A GD+ +AVGWS DVL A R + V +PK
Sbjct: 200 TELLKSVRPYVQKFHSSEYINALANGDICLAVGWSGDVLQARDRAAEADNGVTVEYAIPK 259
Query: 125 SGASLWADLWAIPAASR 141
GA +W D AIPA ++
Sbjct: 260 EGALMWFDQMAIPADAK 276
>gi|421158598|ref|ZP_15617845.1| polyamine transport protein PotD [Pseudomonas aeruginosa ATCC
25324]
gi|404549479|gb|EKA58338.1| polyamine transport protein PotD [Pseudomonas aeruginosa ATCC
25324]
Length = 354
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 32/206 (15%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRISMVNSPREVIGSVLKYMGASYNSN 57
++ Y K++ K + P DW ++ P ++ GR+++++ P+E+ G+ LKY+G S +N
Sbjct: 129 LVGYNKTELDKLGIDPA-DWSVIFDPAVLEKIKGRVTVMDDPQELFGAALKYLGHS--AN 185
Query: 58 NIDLQVAGGKISVQQNLALLANQA-RLFDSTHYLKAFGIGDVWVAVGWSSDVL------P 110
+ D Q Q L L A F+S+ Y+K +G++WVA G+SSD+
Sbjct: 186 DTDPQ----HWKEAQALILAAKPYWAAFNSSSYIKELTLGNIWVAHGYSSDMYQARADAE 241
Query: 111 AVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTAR 170
A R V +P+ GA L D I S + P L +++I+F L
Sbjct: 242 AAGRAFKVDFALPRQGAVLAIDNMVIHKGS-----------KNPD-LAYRFIDFMLDGRN 289
Query: 171 ALPFKQEVIPGASPSALETTLVKLPE 196
A ++ G +P+A +K PE
Sbjct: 290 ASELTNQIGTG-TPNAAALPFIK-PE 313
>gi|218890165|ref|YP_002439029.1| polyamine transport protein PotD [Pseudomonas aeruginosa LESB58]
gi|218770388|emb|CAW26153.1| polyamine transport protein PotD [Pseudomonas aeruginosa LESB58]
Length = 354
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 32/206 (15%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRISMVNSPREVIGSVLKYMGASYNSN 57
++ Y K++ K + P DW ++ P ++ GR+++++ P+E+ G+ LKY+G S +N
Sbjct: 129 LVGYNKTELDKLGIDPA-DWSVIFDPAVLEKIKGRVTVMDDPQELFGAALKYLGHS--AN 185
Query: 58 NIDLQVAGGKISVQQNLALLANQA-RLFDSTHYLKAFGIGDVWVAVGWSSDVL------P 110
+ D Q Q L L A F+S+ Y+K +G++WVA G+SSD+
Sbjct: 186 DTDPQ----HWKEAQALILAAKPYWAAFNSSSYIKELTLGNIWVAHGYSSDMYQARADAE 241
Query: 111 AVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTAR 170
A R V +P+ GA L D I S + P L +++I+F L
Sbjct: 242 AAGRAFKVDFALPRQGAVLAIDNMVIHKGS-----------KNPD-LAYRFIDFMLDGRN 289
Query: 171 ALPFKQEVIPGASPSALETTLVKLPE 196
A ++ G +P+A +K PE
Sbjct: 290 ASELTNQIGTG-TPNAAALPFIK-PE 313
>gi|398940763|ref|ZP_10669441.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM41(2012)]
gi|398162380|gb|EJM50576.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM41(2012)]
Length = 365
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 95/203 (46%), Gaps = 30/203 (14%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGK--- 67
AP W L++PE A + IS ++SP E++ + L Y+G NS N D Q+A +
Sbjct: 151 APTNSWDLLFKPENAAKLKACGISFLDSPTEMLPAALHYLGYPVNSQNKD-QIAEAEALF 209
Query: 68 ISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVV 121
+ ++ ++A F S+ Y+ G++ VAVG+S DVL A R V
Sbjct: 210 MKIRPSVAY-------FHSSKYISDLANGNICVAVGYSGDVLQAKARAQEAGDKVKVDYS 262
Query: 122 VPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPL--IHQWIEFCLQTARALPFKQE 177
+PK GA + D+ AIP AA+ + P + I I + A A P E
Sbjct: 263 IPKEGAGSFYDMVAIPRDAANVENAYLFMNFLMRPDIIAEITNNIGYSNANAAATPLVDE 322
Query: 178 VI---PGASPS-ALETTLVKLPE 196
I PG+ PS A+ TL +P+
Sbjct: 323 AIRDDPGSYPSQAVMATLYAIPD 345
>gi|374308426|ref|YP_005054857.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Filifactor alocis ATCC 35896]
gi|291166751|gb|EFE28797.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Filifactor alocis
ATCC 35896]
Length = 354
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 72/144 (50%), Gaps = 11/144 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNS-NNIDL 61
I Y K+K + P++ W LW + G I M++S R+ I L +G S N+ N +L
Sbjct: 144 ILYNKTKVTE----PVDSWNILWNEKYKGDIVMLDSSRDTIAVALLKLGYSINTQNEEEL 199
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
Q A ++ Q+ L R ++ +Y + G++ + V W+ D + + ++
Sbjct: 200 QKAKEELIKQKPLV------RSYEVDNYKNSMASGELAMVVTWAGDAMNLMAENEDLEYA 253
Query: 122 VPKSGASLWADLWAIPAASRLETK 145
+PK G +LW D AIP S+ +T+
Sbjct: 254 LPKEGTNLWFDAIAIPVTSKHKTE 277
>gi|374703156|ref|ZP_09710026.1| extracellular solute-binding protein [Pseudomonas sp. S9]
Length = 365
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 89/218 (40%), Gaps = 45/218 (20%)
Query: 18 IEDWKDLWRPE-----LAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
I+ W L+ PE +S ++S E+I +VL YMG NS N D ++
Sbjct: 153 IDSWAVLFEPENMKNLTTCGVSFLDSADEMIPAVLNYMGLDPNSKNPD-----DYKKAEE 207
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSG 126
L + F S+ ++ G++ VA G+S DVL A R ++A +PK G
Sbjct: 208 KLLAVRPYVTYFHSSKFISDLANGNICVAAGFSGDVLQAADRAEEAGKGIDIAYAIPKEG 267
Query: 127 ASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSA 186
+LW D+ AIPA S+ KQ H +I + LQ EVI G S
Sbjct: 268 GNLWFDMMAIPADSK-NVKQ-----------AHAFINYLLQP--------EVIAGVS--- 304
Query: 187 LETTLVKLPEELLKGKPSQDTNLIVG---VPPAEILAR 221
V LK D + PP E+L R
Sbjct: 305 ---DYVGYANPNLKSAKFMDQEVSTNPSVYPPQEVLDR 339
>gi|419955797|ref|ZP_14471919.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri TS44]
gi|387967393|gb|EIK51696.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri TS44]
Length = 361
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 30/164 (18%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W L+ P+ A + I+M++S E+I +VL Y+G NS N D + A +
Sbjct: 149 IDSWAVLFEPQNAEKLASCGIAMLDSADEMIPAVLNYLGLDPNSENPADYRKA------E 202
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKS 125
+ L + R F S+ Y+ G++ VA G+S DV A R +A +PK
Sbjct: 203 EKLLAVRPHVRYFHSSKYISDLANGNICVAAGFSGDVFQAAARAEEAGKGIEIAYAIPKE 262
Query: 126 GASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTA 169
G +LW D+ AIPA + G H +I++ L+ A
Sbjct: 263 GGNLWFDMLAIPADA------------GNVEQAHAFIDYLLRPA 294
>gi|420138192|ref|ZP_14646132.1| polyamine transport protein PotD [Pseudomonas aeruginosa CIG1]
gi|403249045|gb|EJY62561.1| polyamine transport protein PotD [Pseudomonas aeruginosa CIG1]
Length = 354
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 32/206 (15%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRISMVNSPREVIGSVLKYMGASYNSN 57
++ Y K++ K + P DW ++ P ++ GR+++++ P+E+ G+ LKY+G S +N
Sbjct: 129 LVGYNKTELDKLGIDPA-DWSVIFDPAVLEKIKGRVTVMDDPQELFGAALKYLGHS--AN 185
Query: 58 NIDLQVAGGKISVQQNLALLANQA-RLFDSTHYLKAFGIGDVWVAVGWSSDVL------P 110
+ D Q Q L L A F+S+ Y+K +G++WVA G+SSD+
Sbjct: 186 DTDPQ----HWKEAQALILAAKPYWAAFNSSSYIKELTLGNIWVAHGYSSDMYQARADAE 241
Query: 111 AVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTAR 170
A R V +P+ GA L D I S + P L +++I+F L
Sbjct: 242 AAGRAFKVDFALPRQGAVLAIDNMVIHKGS-----------KNPD-LAYRFIDFMLDGRN 289
Query: 171 ALPFKQEVIPGASPSALETTLVKLPE 196
A ++ G +P+A +K PE
Sbjct: 290 ASELTNQIGTG-TPNAAALPFIK-PE 313
>gi|237730837|ref|ZP_04561318.1| putrescine ABC transporter periplasmic substrate-binding protein
[Citrobacter sp. 30_2]
gi|365105624|ref|ZP_09334773.1| putrescine-binding periplasmic protein [Citrobacter freundii
4_7_47CFAA]
gi|226906376|gb|EEH92294.1| putrescine ABC transporter periplasmic substrate-binding protein
[Citrobacter sp. 30_2]
gi|363643138|gb|EHL82462.1| putrescine-binding periplasmic protein [Citrobacter freundii
4_7_47CFAA]
Length = 370
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVNSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N++ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|15598806|ref|NP_252300.1| polyamine transporter PotD [Pseudomonas aeruginosa PAO1]
gi|254236526|ref|ZP_04929849.1| polyamine transport protein PotD [Pseudomonas aeruginosa C3719]
gi|254242308|ref|ZP_04935630.1| polyamine transport protein PotD [Pseudomonas aeruginosa 2192]
gi|418586155|ref|ZP_13150201.1| polyamine transporter PotD [Pseudomonas aeruginosa MPAO1/P1]
gi|418589417|ref|ZP_13153339.1| polyamine transporter PotD [Pseudomonas aeruginosa MPAO1/P2]
gi|421152581|ref|ZP_15612161.1| polyamine transport protein PotD [Pseudomonas aeruginosa ATCC
14886]
gi|421179226|ref|ZP_15636822.1| polyamine transport protein PotD [Pseudomonas aeruginosa E2]
gi|9949767|gb|AAG06998.1|AE004781_6 polyamine transport protein PotD [Pseudomonas aeruginosa PAO1]
gi|126168457|gb|EAZ53968.1| polyamine transport protein PotD [Pseudomonas aeruginosa C3719]
gi|126195686|gb|EAZ59749.1| polyamine transport protein PotD [Pseudomonas aeruginosa 2192]
gi|375043829|gb|EHS36445.1| polyamine transporter PotD [Pseudomonas aeruginosa MPAO1/P1]
gi|375051651|gb|EHS44117.1| polyamine transporter PotD [Pseudomonas aeruginosa MPAO1/P2]
gi|404525341|gb|EKA35617.1| polyamine transport protein PotD [Pseudomonas aeruginosa ATCC
14886]
gi|404547469|gb|EKA56467.1| polyamine transport protein PotD [Pseudomonas aeruginosa E2]
Length = 354
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 32/206 (15%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRISMVNSPREVIGSVLKYMGASYNSN 57
++ Y K++ K + P DW ++ P ++ GR+++++ P+E+ G+ LKY+G S +N
Sbjct: 129 LVGYNKTELDKLGIDPA-DWSVIFDPAVLEKIKGRVTVMDDPQELFGAALKYLGHS--AN 185
Query: 58 NIDLQVAGGKISVQQNLALLANQA-RLFDSTHYLKAFGIGDVWVAVGWSSDVL------P 110
+ D Q Q L L A F+S+ Y+K +G++WVA G+SSD+
Sbjct: 186 DTDPQ----HWKEAQALILAAKPYWAAFNSSSYIKELTLGNIWVAHGYSSDMYQARADAE 241
Query: 111 AVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTAR 170
A R V +P+ GA L D I S + P L +++I+F L
Sbjct: 242 AAGRAFKVDFALPRQGAVLAIDNMVIHKGS-----------KNPD-LAYRFIDFMLDGRN 289
Query: 171 ALPFKQEVIPGASPSALETTLVKLPE 196
A ++ G +P+A +K PE
Sbjct: 290 ASELTNQIGTG-TPNAAALPFIK-PE 313
>gi|219870359|ref|YP_002474734.1| spermidine/putrescine-binding periplasmic protein 1 [Haemophilus
parasuis SH0165]
gi|219690563|gb|ACL31786.1| spermidine/putrescine-binding periplasmic protein 1 precursor
[Haemophilus parasuis SH0165]
Length = 346
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 104/230 (45%), Gaps = 33/230 (14%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IA+ + ++ N W DLW+PE G++ +++ REV L +G N+ +
Sbjct: 134 IAFNTNSYKGDNFTA---WGDLWKPEFKGKVQLLDDAREVFNIALLKLGQDPNTKD---- 186
Query: 63 VAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVV 122
A K + ++ L L N F S + +F G+V V W+ V A K + V +V
Sbjct: 187 PAVIKAAYEELLKLRPN-VLAFSSDNPANSFISGEVEVGQLWNGSVRIAKKEQAPVNMVF 245
Query: 123 PKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEV-IPG 181
PK G LW D AIP+ V+ P H+ I + L A E+ P
Sbjct: 246 PKEGPVLWVDTLAIPS-----------NVKNPDA-AHKLINYLLSAPVAEKLTLEIGYPT 293
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEA 231
++ ALE KLP+E+ ++D + P +E+L + ++ + + +A
Sbjct: 294 SNVKALE----KLPKEI-----TEDPAI---YPTSEVLQKSQWQDDVGDA 331
>gi|424939578|ref|ZP_18355341.1| polyamine transport protein PotD [Pseudomonas aeruginosa NCMG1179]
gi|346056024|dbj|GAA15907.1| polyamine transport protein PotD [Pseudomonas aeruginosa NCMG1179]
Length = 353
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 32/206 (15%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRISMVNSPREVIGSVLKYMGASYNSN 57
++ Y K++ K + P DW ++ P ++ GR+++++ P+E+ G+ LKY+G S +N
Sbjct: 128 LVGYNKTELDKLGIDPA-DWSVIFDPAVLEKIKGRVTVMDDPQELFGAALKYLGHS--AN 184
Query: 58 NIDLQVAGGKISVQQNLALLANQA-RLFDSTHYLKAFGIGDVWVAVGWSSDVL------P 110
+ D Q Q L L A F+S+ Y+K +G++WVA G+SSD+
Sbjct: 185 DTDPQ----HWKEAQALILAAKPYWAAFNSSSYIKELTLGNIWVAHGYSSDMYQARADAE 240
Query: 111 AVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTAR 170
A R V +P+ GA L D I S + P L +++I+F L
Sbjct: 241 AAGRAFKVDFALPRQGAVLAIDNMVIHKGS-----------KNPD-LAYRFIDFMLDGRN 288
Query: 171 ALPFKQEVIPGASPSALETTLVKLPE 196
A ++ G +P+A +K PE
Sbjct: 289 ASELTNQIGTG-TPNAAALPFIK-PE 312
>gi|107103124|ref|ZP_01367042.1| hypothetical protein PaerPA_01004193 [Pseudomonas aeruginosa PACS2]
Length = 354
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 32/206 (15%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRISMVNSPREVIGSVLKYMGASYNSN 57
++ Y K++ K + P DW ++ P ++ GR+++++ P+E+ G+ LKY+G S +N
Sbjct: 129 LVGYNKTELDKLGIDPA-DWSVIFDPAVLEKIKGRVTVMDDPQELFGAALKYLGHS--AN 185
Query: 58 NIDLQVAGGKISVQQNLALLANQA-RLFDSTHYLKAFGIGDVWVAVGWSSDVL------P 110
+ D Q Q L L A F+S+ Y+K +G++WVA G+SSD+
Sbjct: 186 DTDPQ----HWKEAQALILAAKPYWAAFNSSSYIKELTLGNIWVAHGYSSDMYQARADAE 241
Query: 111 AVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTAR 170
A R V +P+ GA L D I S + P L +++I+F L
Sbjct: 242 AAGRAFKVDFALPRQGAVLAIDNMVIHKGS-----------KNPD-LAYRFIDFMLDGRN 289
Query: 171 ALPFKQEVIPGASPSALETTLVKLPE 196
A ++ G +P+A +K PE
Sbjct: 290 ASELTNQIGTG-TPNAAALPFIK-PE 313
>gi|431929348|ref|YP_007242382.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas
stutzeri RCH2]
gi|431827635|gb|AGA88752.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas
stutzeri RCH2]
Length = 361
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 19/139 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQ 71
I+ W ++ PE A + I+ ++S E+I ++L Y+G NS N D Q A +
Sbjct: 149 IDSWSVIFEPENAAKLASCGIAFLDSADEMIPAMLNYLGLDPNSENAADYQKA------E 202
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKS 125
+ L + R F S+ Y+ G++ VA G+S DV A R +A +P
Sbjct: 203 EKLLAVRPHVRYFHSSKYISDLANGNICVAAGFSGDVFQAAARAEEAGKGIEIAYAIPAE 262
Query: 126 GASLWADLWAIPA-ASRLE 143
GA+LW D+ AIPA AS +E
Sbjct: 263 GANLWFDMLAIPADASNVE 281
>gi|405379647|ref|ZP_11033495.1| spermidine/putrescine-binding periplasmic protein [Rhizobium sp.
CF142]
gi|397323895|gb|EJJ28285.1| spermidine/putrescine-binding periplasmic protein [Rhizobium sp.
CF142]
Length = 365
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 97/226 (42%), Gaps = 43/226 (19%)
Query: 20 DWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQN 73
+W L+ P A + I M++SP +VI SVL Y+G NS DL A Q+
Sbjct: 155 NWDALFDPAKAAKLKDCGIYMLDSPTDVIPSVLAYLGLDPNSKKPEDLNKA------QEV 208
Query: 74 LALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGA 127
L + R F S+ Y+ A GD+ +A+G+S DV A R + NV VP GA
Sbjct: 209 LLAVRPFVRKFHSSEYISALANGDICIALGFSGDVFQARDRAAEAKAGVNVDYSVPSQGA 268
Query: 128 SLWADLWAIPA-ASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSA 186
++ D++ IP A +E H++I + + K EV+ AS
Sbjct: 269 QIFFDVFGIPKDAPHVEEA-------------HEFINYMM--------KPEVVAKASNFV 307
Query: 187 LETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEAT 232
K ++ L DT + P EI+A+ + PL T
Sbjct: 308 FYANGNKASQQFLDKDVIDDTAIY---PTPEIMAKLFTVPPLDPKT 350
>gi|398887585|ref|ZP_10642244.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
gi|398192053|gb|EJM79222.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
Length = 365
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQ 71
I+ W L+ PE + ++ ++S E++ +VL YMG + NS N D + A K
Sbjct: 153 IDSWSMLFEPENIKKLHKCGVAFLDSADEMMPTVLNYMGLNANSTNEEDYKKATAK---- 208
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
L + F+S+ Y+ GD+ VAVG+S D+ A R N+A +PK
Sbjct: 209 --LLAVRPYVTYFNSSKYITDLANGDICVAVGFSGDIFQARNRAKEAKKGINIAYAIPKE 266
Query: 126 GASLWADLWAIPAAS 140
G +LW D+ AIP S
Sbjct: 267 GGALWFDMLAIPKDS 281
>gi|398944508|ref|ZP_10671287.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM41(2012)]
gi|398158081|gb|EJM46442.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM41(2012)]
Length = 362
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 63/133 (47%), Gaps = 18/133 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W + PE + +SM++S EV +VL YMG S N D + A K
Sbjct: 150 IDSWAVFFEPENLKKLSQCGVSMMDSADEVFPAVLNYMGMDPRSENPEDFKKAEAK---- 205
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
L + F S+ Y+ GD+ VA G+S DV A R N+A +PK
Sbjct: 206 --LLTIRPYITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKE 263
Query: 126 GASLWADLWAIPA 138
G++LW DL A+PA
Sbjct: 264 GSNLWFDLLAVPA 276
>gi|417455361|ref|ZP_12163500.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Montevideo
str. S5-403]
gi|353634815|gb|EHC81292.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Montevideo
str. S5-403]
Length = 349
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 165 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL 223
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N++ +PK
Sbjct: 224 ---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPK 280
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 281 EGAMAFFDVFAMPADAK 297
>gi|313108968|ref|ZP_07794943.1| polyamine transport protein PotD [Pseudomonas aeruginosa 39016]
gi|386067645|ref|YP_005982949.1| polyamine ABC transporter [Pseudomonas aeruginosa NCGM2.S1]
gi|310881445|gb|EFQ40039.1| polyamine transport protein PotD [Pseudomonas aeruginosa 39016]
gi|348036204|dbj|BAK91564.1| polyamine ABC transporter [Pseudomonas aeruginosa NCGM2.S1]
Length = 353
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 32/206 (15%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRISMVNSPREVIGSVLKYMGASYNSN 57
++ Y K++ K + P DW ++ P ++ GR+++++ P+E+ G+ LKY+G S +N
Sbjct: 128 LVGYNKTELDKLGIDPA-DWSVIFDPAVLEKIKGRVTVMDDPQELFGAALKYLGHS--AN 184
Query: 58 NIDLQVAGGKISVQQNLALLANQA-RLFDSTHYLKAFGIGDVWVAVGWSSDVL------P 110
+ D Q Q L L A F+S+ Y+K +G++WVA G+SSD+
Sbjct: 185 DTDPQ----HWKEAQALILAAKPYWAAFNSSSYIKELTLGNIWVAHGYSSDMYQARADAE 240
Query: 111 AVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTAR 170
A R V +P+ GA L D I S + P L +++I+F L
Sbjct: 241 AAGRAFKVDFALPRQGAVLAIDNMVIHKGS-----------KNPD-LAYRFIDFMLDGRN 288
Query: 171 ALPFKQEVIPGASPSALETTLVKLPE 196
A ++ G +P+A +K PE
Sbjct: 289 ASELTNQIGTG-TPNAAALPFIK-PE 312
>gi|257868707|ref|ZP_05648360.1| extracellular solute-binding protein [Enterococcus gallinarum EG2]
gi|257802871|gb|EEV31693.1| extracellular solute-binding protein [Enterococcus gallinarum EG2]
Length = 356
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 30/220 (13%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALL 77
I W DLWRPE A I +V+ RE +G L+ + S N +L A + ++++ AL
Sbjct: 155 IHGWADLWRPEFANDILVVDGARETLGMALQTLDLSQN----ELDTANLQQAIEKLEALR 210
Query: 78 AN-QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
N +A L D L D + +G+S D + + VVP G ++W D +AI
Sbjct: 211 PNVKAVLTDEIKTLMV--NNDAPIGIGYSGDAAYVMSENPAITYVVPNDGGAIWTDNFAI 268
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPE 196
P G + G + +I F L+ A E + A+PS ET LP
Sbjct: 269 PKTV--------GNLEGA----YAFINFMLRPENAAQ-NAEYVGYATPS--ETAKQLLPT 313
Query: 197 ELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDY 236
EL K P E + + E E L + + Y
Sbjct: 314 ELTSNKAF--------YPEPEAMQQMEHYEYLGKNAVEQY 345
>gi|416874859|ref|ZP_11918408.1| polyamine ABC transporter [Pseudomonas aeruginosa 152504]
gi|334842601|gb|EGM21205.1| polyamine ABC transporter [Pseudomonas aeruginosa 152504]
Length = 354
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 31/196 (15%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRISMVNSPREVIGSVLKYMGASYNSN 57
++ Y K++ K + P DW ++ P ++ GR+++++ P+E+ G+ LKY+G S +N
Sbjct: 129 LVGYNKTELDKLGIDPA-DWSVIFDPAVLEKIKGRVTVMDDPQELFGAALKYLGHS--AN 185
Query: 58 NIDLQVAGGKISVQQNLALLANQA-RLFDSTHYLKAFGIGDVWVAVGWSSDVL------P 110
+ D Q Q L L A F+S+ Y+K +G++WVA G+SSD+
Sbjct: 186 DTDPQ----HWKEAQTLILAAKPYWAAFNSSSYIKELTLGNIWVAHGYSSDMYQARADAE 241
Query: 111 AVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTAR 170
A R V +P+ GA L D I S + P L +++I+F L
Sbjct: 242 AAGRAFKVDFALPRQGAVLAIDNMVIHKGS-----------KNPD-LAYRFIDFMLDGRN 289
Query: 171 ALPFKQEVIPGASPSA 186
A ++ G +P+A
Sbjct: 290 ASELTNQIGTG-TPNA 304
>gi|296387886|ref|ZP_06877361.1| polyamine ABC transporter [Pseudomonas aeruginosa PAb1]
Length = 353
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 31/196 (15%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRISMVNSPREVIGSVLKYMGASYNSN 57
++ Y K++ K + P DW ++ P ++ GR+++++ P+E+ G+ LKY+G S +N
Sbjct: 128 LVGYNKTELDKLGIDPA-DWSVIFDPAVLEKIKGRVTVMDDPQELFGAALKYLGHS--AN 184
Query: 58 NIDLQVAGGKISVQQNLALLANQA-RLFDSTHYLKAFGIGDVWVAVGWSSDVL------P 110
+ D Q Q L L A F+S+ Y+K +G++WVA G+SSD+
Sbjct: 185 DTDPQ----HWKEAQTLILAAKPYWAAFNSSSYIKELTLGNIWVAHGYSSDMYQARADAE 240
Query: 111 AVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTAR 170
A R V +P+ GA L D I S + P L +++I+F L
Sbjct: 241 AAGRAFKVDFALPRQGAVLAIDNMVIHKGS-----------KNPD-LAYRFIDFMLDGRN 288
Query: 171 ALPFKQEVIPGASPSA 186
A ++ G +P+A
Sbjct: 289 ASELTNQIGTG-TPNA 303
>gi|398954989|ref|ZP_10676221.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM33]
gi|398151733|gb|EJM40272.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM33]
Length = 365
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQ 71
I+ W L+ PE + ++ ++S E++ +VL YMG + NS N D + A K
Sbjct: 153 IDSWSVLFEPENIKKLHKCGVAFLDSADEMMPTVLNYMGLNANSTNEEDYKKATAK---- 208
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
L + F+S+ Y+ GD+ VAVG+S D+ A R N+A +PK
Sbjct: 209 --LLAVRPYVTYFNSSKYITDLANGDICVAVGFSGDIFQARNRAQEAKKGINIAYAIPKE 266
Query: 126 GASLWADLWAIPAAS 140
G +LW D+ AIP S
Sbjct: 267 GGALWFDMLAIPKDS 281
>gi|262041052|ref|ZP_06014271.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259041610|gb|EEW42662.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 370
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 155 APVDSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQVANRAKEAKNGVNVSYFIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGALAFFDVFAMPADAK 287
>gi|420369175|ref|ZP_14869900.1| putrescine-binding periplasmic protein [Shigella flexneri 1235-66]
gi|391321501|gb|EIQ78224.1| putrescine-binding periplasmic protein [Shigella flexneri 1235-66]
Length = 370
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P EV +VL Y+G NS D G +
Sbjct: 155 APVNSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N++ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|416854709|ref|ZP_11911066.1| polyamine transport protein PotD [Pseudomonas aeruginosa 138244]
gi|421518153|ref|ZP_15964827.1| polyamine transporter PotD [Pseudomonas aeruginosa PAO579]
gi|451987812|ref|ZP_21935964.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD (TC 3.A.1.11.1) [Pseudomonas aeruginosa 18A]
gi|334843692|gb|EGM22277.1| polyamine transport protein PotD [Pseudomonas aeruginosa 138244]
gi|404347635|gb|EJZ73984.1| polyamine transporter PotD [Pseudomonas aeruginosa PAO579]
gi|451754571|emb|CCQ88487.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD (TC 3.A.1.11.1) [Pseudomonas aeruginosa 18A]
gi|453047383|gb|EME95097.1| polyamine transporter PotD [Pseudomonas aeruginosa PA21_ST175]
Length = 353
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 32/206 (15%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRISMVNSPREVIGSVLKYMGASYNSN 57
++ Y K++ K + P DW ++ P ++ GR+++++ P+E+ G+ LKY+G S +N
Sbjct: 128 LVGYNKTELDKLGIDPA-DWSVIFDPAVLEKIKGRVTVMDDPQELFGAALKYLGHS--AN 184
Query: 58 NIDLQVAGGKISVQQNLALLANQA-RLFDSTHYLKAFGIGDVWVAVGWSSDVL------P 110
+ D Q Q L L A F+S+ Y+K +G++WVA G+SSD+
Sbjct: 185 DTDPQ----HWKEAQALILAAKPYWAAFNSSSYIKELTLGNIWVAHGYSSDMYQARADAE 240
Query: 111 AVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTAR 170
A R V +P+ GA L D I S + P L +++I+F L
Sbjct: 241 AAGRAFKVDFALPRQGAVLAIDNMVIHKGS-----------KNPD-LAYRFIDFMLDGRN 288
Query: 171 ALPFKQEVIPGASPSALETTLVKLPE 196
A ++ G +P+A +K PE
Sbjct: 289 ASELTNQIGTG-TPNAAALPFIK-PE 312
>gi|260914210|ref|ZP_05920683.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Pasteurella dagmatis ATCC
43325]
gi|260631843|gb|EEX50021.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Pasteurella dagmatis ATCC
43325]
Length = 351
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 100/229 (43%), Gaps = 31/229 (13%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IA+ ++ N W DLW+PE G++ +++ REV L +G N+ + ++
Sbjct: 139 IAFNTDSYKSENFTT---WGDLWKPEFQGKVQLLDDAREVFNIALLKLGQDPNTKDPEII 195
Query: 63 VAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVV 122
K + ++ L L N F+S + +F G+V V W+ V A K + + +V
Sbjct: 196 ----KQAYEELLKLRPNVLS-FNSDNPANSFISGEVEVGQLWNGSVRIAKKEQAPLDMVF 250
Query: 123 PKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGA 182
PK G LW D AIP S + P H+ I + L + +E+
Sbjct: 251 PKEGPVLWVDTLAIPTTS-----------KNPDG-AHKLINYLLSAKVSAKLTEEI---G 295
Query: 183 SPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEA 231
P++ L LP E+ +QD + P AEIL + + + + +A
Sbjct: 296 YPTSNVEALKLLPAEI-----TQDPAI---YPTAEILQKSHWQDDVGDA 336
>gi|374604938|ref|ZP_09677885.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Paenibacillus
dendritiformis C454]
gi|374389461|gb|EHQ60836.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Paenibacillus
dendritiformis C454]
Length = 344
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 11/140 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDL 61
IAY K KH W DLW+ E G++ +++ RE+IG LK G S +++N D+
Sbjct: 133 IAYNK----KHIAEAPTSWADLWKDEYKGKVLLLDDNREIIGMALKKAGKSNSADNEADI 188
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
A +L L FD+ + + + W+ WS D + +VA V
Sbjct: 189 NAAA------DDLRKLVPNVVAFDTDNIKQKMIQEEGWIGTVWSGDAAFIAEENPDVAYV 242
Query: 122 VPKSGASLWADLWAIPAASR 141
VP+ G++++AD +AIP ++
Sbjct: 243 VPQEGSTIFADTYAIPKGAK 262
>gi|357049604|ref|ZP_09110823.1| hypothetical protein HMPREF9478_00806 [Enterococcus saccharolyticus
30_1]
gi|355383069|gb|EHG30156.1| hypothetical protein HMPREF9478_00806 [Enterococcus saccharolyticus
30_1]
Length = 359
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 30/220 (13%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALL 77
I W DLWRPE A I +V+ RE +G L+ + S N +L A + ++++ AL
Sbjct: 158 IHGWADLWRPEFANDILVVDGARETLGMALQTLDLSQN----ELDTANLQQAIEKLEALR 213
Query: 78 AN-QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
N +A L D L D + +G+S D + + VVP G ++W D +AI
Sbjct: 214 PNVKAVLTDEIKTLMV--NNDAPIGIGYSGDAAYVMSENPAITYVVPNDGGAIWTDNFAI 271
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPE 196
P G + G + +I F L+ A E + A+PS ET LP
Sbjct: 272 PKTV--------GNLEGA----YAFINFMLRPENAAQ-NAEYVGYATPS--ETAKQLLPT 316
Query: 197 ELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDY 236
EL K P E + + E E L + + Y
Sbjct: 317 ELTSNKAF--------YPEPEAMQQMEHYEYLGKNAVEQY 348
>gi|238757952|ref|ZP_04619134.1| Putrescine-binding periplasmic protein [Yersinia aldovae ATCC
35236]
gi|238703937|gb|EEP96472.1| Putrescine-binding periplasmic protein [Yersinia aldovae ATCC
35236]
Length = 369
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS +Q
Sbjct: 154 APVNSWDLVLKPENLEKLKSCGVSFLDAPSEIFATVLNYLGKDPNS----IQATDYTGPA 209
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
+ L L R F S+ Y+ GD+ VAVGW+ D++ A R NVA +PK
Sbjct: 210 TELLLKLRPNIRYFHSSQYINDLANGDICVAVGWAGDIMQASNRAKEAKNGVNVAYSIPK 269
Query: 125 SGASLWADLWAIPAASR 141
G + D++A+P+ ++
Sbjct: 270 EGVLAFFDVFAMPSDAK 286
>gi|300022947|ref|YP_003755558.1| family 1 extracellular solute-binding protein [Hyphomicrobium
denitrificans ATCC 51888]
gi|299524768|gb|ADJ23237.1| extracellular solute-binding protein family 1 [Hyphomicrobium
denitrificans ATCC 51888]
Length = 370
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 77/152 (50%), Gaps = 19/152 (12%)
Query: 3 IAYKKSKFRKHNL-APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNS 56
I Y K ++ AP++ W +++PE+ + + M+++P +++ + L Y+G NS
Sbjct: 142 IGYNIGKVKERMADAPVDSWDLIFKPEILAKFKDCGVMMLDAPDDILPAALNYLGLDPNS 201
Query: 57 NN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPA---- 111
+ D++ AG + + + F S+ Y+ A GD+ +AVG+S D+L A
Sbjct: 202 SKPEDIEKAGALMEKVRPFV------QKFHSSEYINALANGDICIAVGYSGDILQARTRA 255
Query: 112 --VKRMSNVAVVVPKSGASLWADLWAIPAASR 141
K + +PK GA +W D AIPA ++
Sbjct: 256 QEAKNGQEIGYSLPKQGAQMWFDEMAIPADAK 287
>gi|398998348|ref|ZP_10701126.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM21]
gi|398120775|gb|EJM10428.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM21]
Length = 362
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 64/133 (48%), Gaps = 18/133 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W L+ PE + +SM++S EV ++L YMG S N D + A K
Sbjct: 150 IDSWAVLFEPENIKKLSQCGVSMMDSADEVFPAMLNYMGMDPRSENPEDFKKAEAK---- 205
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
L + F S+ Y+ GD+ VA G+S DV A R N+A +PK
Sbjct: 206 --LLAIRPYITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKE 263
Query: 126 GASLWADLWAIPA 138
G++LW DL A+PA
Sbjct: 264 GSNLWFDLLAVPA 276
>gi|417340403|ref|ZP_12121730.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Baildon
str. R6-199]
gi|357959170|gb|EHJ83510.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Baildon
str. R6-199]
Length = 294
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 110 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL 168
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N++ +PK
Sbjct: 169 ---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPK 225
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 226 EGAMAFFDVFAMPADAK 242
>gi|409249324|ref|YP_006885156.1| Spermidine/putrescine-binding periplasmic protein SPBP; Flags:
Precursor [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|416724823|ref|ZP_11845207.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|320085152|emb|CBY94939.1| Spermidine/putrescine-binding periplasmic protein SPBP; Flags:
Precursor [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|323243138|gb|EGA27158.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
Length = 353
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 138 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL 196
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N++ +PK
Sbjct: 197 ---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPK 253
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 254 EGAMAFFDVFAMPADAK 270
>gi|402770567|ref|YP_006590104.1| extracellular solute-binding protein family 1 [Methylocystis sp.
SC2]
gi|401772587|emb|CCJ05453.1| Extracellular solute-binding protein family 1 [Methylocystis sp.
SC2]
Length = 361
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 71/151 (47%), Gaps = 18/151 (11%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSN 57
+AY +K ++ PI W + RPE +++ M++SP ++ L Y+ NS
Sbjct: 134 VAYDVAKVQERLGKPITSWDQVLRPENLKKLADCGVYMLDSPEDMFAIALNYLKLDPNSK 193
Query: 58 N-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS 116
N DL A G L L + F S+ Y+ A GD+ VA+GWS D L A R
Sbjct: 194 NPKDLARAAGL------LGSLRRYVKKFHSSEYINALANGDICVAIGWSGDSLQARNRAR 247
Query: 117 ------NVAVVVPKSGASLWADLWAIPAASR 141
++A V+P G+ L D AIP +R
Sbjct: 248 EAGTDVDIAYVIPTEGSLLSLDNLAIPEDAR 278
>gi|320158082|ref|YP_004190460.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio vulnificus MO6-24/O]
gi|319933394|gb|ADV88257.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Vibrio vulnificus MO6-24/O]
Length = 344
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 16 APIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLA 75
AP+ W DLW + A ++ +++ R+V G LK G S N+ N D ++ ++L
Sbjct: 142 APVTRWADLWDKKYAQQVMLIDDIRDVFGMALKLNGYSINTKNED-EIK----KAYESLV 196
Query: 76 LLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWA 135
L N L++S + G+ V + W+ + M + V+P+ GA +W D +
Sbjct: 197 ALKNNVLLYNSDAPQVPYVSGETSVGMQWNGNAYQGQVEMPELKFVMPEEGAVMWMDNFT 256
Query: 136 IPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG-ASPSALETTLVKL 194
IP+ S+ + L H++I F Q + E++ SA L
Sbjct: 257 IPSGSKHKE------------LAHKFINFMYQPEH----QAEIVNSLGYASATNAGRALL 300
Query: 195 PEELLKGKPSQDTNLIVGVPPAEI-LARCEFLEPLSEATLSDYE 237
P+E LK P+ + PA+ + + EF+ + L+ YE
Sbjct: 301 PDE-LKNNPT--------IFPADADVKKGEFINDVGPEALAIYE 335
>gi|251789985|ref|YP_003004706.1| putrescine ABC transporter subunit periplasmic-binding protein
[Dickeya zeae Ech1591]
gi|247538606|gb|ACT07227.1| extracellular solute-binding protein family 1 [Dickeya zeae
Ech1591]
Length = 369
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 40/218 (18%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y G + NS + K +
Sbjct: 154 APVNSWDLVLKPENLEKLKSCGVSFLDAPAEIYATVLNYQGKNPNSAT---EADYTKDAT 210
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L N R F S+ Y+ GD+ VA+GW+ DV+ A R N++ +PK
Sbjct: 211 DLLLKLRPN-IRYFHSSQYINDLANGDICVAIGWAGDVMQAANRAKEAKNGVNISYSIPK 269
Query: 125 SGASLWADLWAIPA-ASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGAS 183
GA + D++AIP A L++ +Q++ + L K EVI S
Sbjct: 270 EGALAFFDVFAIPKDAKNLDSA-------------YQFLNYLL--------KPEVIANVS 308
Query: 184 PSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILAR 221
K L+K + + N+ PPA+I A+
Sbjct: 309 NHVYYANPNKEATALVKDEVRNNPNIY---PPADIRAK 343
>gi|376297850|ref|YP_005169080.1| extracellular solute-binding protein [Desulfovibrio desulfuricans
ND132]
gi|323460412|gb|EGB16277.1| extracellular solute-binding protein family 1 [Desulfovibrio
desulfuricans ND132]
Length = 344
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 30/221 (13%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALL 77
+ + DLW+PE+ R+ + N PREV LK +G S N D A K + ++ L L
Sbjct: 143 VTSYADLWKPEMKDRLLLPNDPREVFAIALKSLGYSLN----DTDPAHLKQAYEK-LKGL 197
Query: 78 ANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 137
R+FDS +A G+V V V W+ + A + + V PK G SLW D IP
Sbjct: 198 MPYVRVFDSDSPKQALLSGEVAVGVIWNGEAYVANQENPEIKYVYPKEGFSLWMDSLCIP 257
Query: 138 AASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEE 197
++ + H ++ + L+ A E + ++P+ + + LP E
Sbjct: 258 KGAKNLDEA------------HTFLNYLLRPDVAAAISTE-MGYSTPNEVASEF--LPAE 302
Query: 198 LLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEA--TLSDY 236
+ +D ++ P A +R EF + + EA T DY
Sbjct: 303 V------RDNPIV--YPDATTASRGEFQDDIGEAMKTYEDY 335
>gi|397657008|ref|YP_006497710.1| putrescine ABC transporter putrescine-binding protein PotF
[Klebsiella oxytoca E718]
gi|394345525|gb|AFN31646.1| Putrescine ABC transporter putrescine-binding protein PotF
[Klebsiella oxytoca E718]
Length = 370
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P E+ ++L Y+G NS D G +
Sbjct: 155 APLDSWDLVMKPENLEKLKSCGVSFLDAPEEIFATLLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYYIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGALAFFDVFAMPADAK 287
>gi|311280262|ref|YP_003942493.1| extracellular solute-binding protein [Enterobacter cloacae SCF1]
gi|308749457|gb|ADO49209.1| extracellular solute-binding protein family 1 [Enterobacter cloacae
SCF1]
Length = 370
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS D G +
Sbjct: 155 APVNSWDLVMKPENLQKLKSCGVSFLDAPEEIFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R N++ +PK
Sbjct: 214 ---LLKLRPDIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNISYSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGALAFFDVFAMPADAK 287
>gi|372269532|ref|ZP_09505580.1| transcription factor jumonji, jmjC [Marinobacterium stanieri S30]
Length = 363
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 70/149 (46%), Gaps = 18/149 (12%)
Query: 3 IAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYN 55
I Y K R+ + P + W+ L+ PE+ + +++++ P EV+ + Y GA
Sbjct: 134 IGYNVEKVREVLGDDMPKDTWRLLFDPEIVAKLASCGVTLMDDPTEVLVAANIYRGA--- 190
Query: 56 SNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM 115
N D G + +A + R F S+ Y+ GD+ VA G+S DVL A R
Sbjct: 191 --NADDFSKAGIAGASETVAAVRPHIRYFHSSQYINDLANGDICVAHGYSGDVLQARDRA 248
Query: 116 S------NVAVVVPKSGASLWADLWAIPA 138
+ +A VP GA +W D+ AIPA
Sbjct: 249 AEAGNGVEIAYAVPSEGALVWTDVMAIPA 277
>gi|27367812|ref|NP_763339.1| ABC transporter periplasmic spermidine putrescine-binding protein
potD [Vibrio vulnificus CMCP6]
gi|27359385|gb|AAO08329.1| ABC transporter, periplasmic spermidine putrescine-binding protein
potD [Vibrio vulnificus CMCP6]
Length = 360
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 16 APIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLA 75
AP+ W DLW + A ++ +++ R+V G LK G S N+ N D ++ ++L
Sbjct: 158 APVTRWADLWDKKYAQQVMLIDDIRDVFGMALKLNGYSINTKNED-EIK----KAYESLV 212
Query: 76 LLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWA 135
L N L++S + G+ V + W+ + M + V+P+ GA +W D +
Sbjct: 213 ALKNNVLLYNSDAPQVPYVSGETSVGMQWNGNAYQGQVEMPELKFVMPEEGAVMWMDNFT 272
Query: 136 IPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG-ASPSALETTLVKL 194
IP+ S+ + L H++I F Q + E++ SA L
Sbjct: 273 IPSGSKHKE------------LAHKFINFMYQPEH----QAEIVNSLGYASATNAGRALL 316
Query: 195 PEELLKGKPSQDTNLIVGVPPAEI-LARCEFLEPLSEATLSDYE 237
P+E LK P+ + PA+ + + EF+ + L+ YE
Sbjct: 317 PDE-LKNNPT--------IFPADADVKKGEFINDVGPEALAIYE 351
>gi|438130582|ref|ZP_20873498.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Pullorum str. ATCC 9120]
gi|434941649|gb|ELL48063.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Pullorum str. ATCC 9120]
Length = 370
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 155 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N++ +PK
Sbjct: 214 ---LLRLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|430002217|emb|CCF17998.1| Putrescine-binding periplasmic protein [Rhizobium sp.]
Length = 365
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 98/223 (43%), Gaps = 41/223 (18%)
Query: 17 PIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQ 71
P++ W L++PE A + I+++++ E + Y+G +S AGG++ +
Sbjct: 152 PVDSWDILFKPENAEKLKACGINILDASDETFAIAMNYVGKDPDSKETADLEAGGEVYMN 211
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
+ + F+S+ Y+ GD +++GWS DVL A R NV V+PK
Sbjct: 212 -----IRPFVKTFNSSAYIDELANGDTCISMGWSGDVLQAKARAEEAGNGVNVEYVIPKE 266
Query: 126 GASLWADLWAIPA-ASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASP 184
G +W D AIPA A +E H++I F + K EVI AS
Sbjct: 267 GTYMWFDNLAIPADAKNVEEA-------------HEFINFLM--------KPEVIAKASN 305
Query: 185 SALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEP 227
+ELL + ++ ++ PPAE +++ + P
Sbjct: 306 YVQYANGNLASQELLDKEVLENPSVY---PPAETVSKLFTISP 345
>gi|378955758|ref|YP_005213245.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Gallinarum/pullorum str. RKS5078]
gi|357206369|gb|AET54415.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Gallinarum/pullorum
str. RKS5078]
Length = 371
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 156 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL 214
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N++ +PK
Sbjct: 215 ---LLRLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPK 271
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 272 EGAMAFFDVFAMPADAK 288
>gi|403253681|ref|ZP_10919982.1| spermidine/putrescine ABC transporter substrate-binding protein
[Thermotoga sp. EMP]
gi|402811215|gb|EJX25703.1| spermidine/putrescine ABC transporter substrate-binding protein
[Thermotoga sp. EMP]
Length = 335
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 91/214 (42%), Gaps = 38/214 (17%)
Query: 21 WKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLAN 79
W R +L GR+++++ REV+G+ LKY+G S N+ N +L+ A Q L N
Sbjct: 144 WSIFDREDLRGRMTLLDDMREVLGAALKYLGYSVNTKNPKELEEAK-----QVVLRWKKN 198
Query: 80 QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN--VAVVVPKSGASLWADLWAIP 137
A+ FD++ Y G+ WV G++ DV + +PK G +LW D IP
Sbjct: 199 IAK-FDASSYADGIVSGEYWVVHGYAEDVYQRIPEGEEKYFDFFIPKEGGTLWIDNMVIP 257
Query: 138 AASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEE 197
++ L +++I F L+ A A + LP
Sbjct: 258 KGAK------------NVDLAYKFINFILEPENA--------------AKIADYLGLPSP 291
Query: 198 LLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEA 231
++ + T I + E L CEF+E + EA
Sbjct: 292 NVEARKYMQTEPIYTI---EDLKNCEFIEDVGEA 322
>gi|399054172|ref|ZP_10742802.1| spermidine/putrescine-binding periplasmic protein [Brevibacillus
sp. CF112]
gi|433544690|ref|ZP_20501067.1| spermidine/putrescine ABC transporter substrate-binding protein
[Brevibacillus agri BAB-2500]
gi|398048070|gb|EJL40562.1| spermidine/putrescine-binding periplasmic protein [Brevibacillus
sp. CF112]
gi|432184038|gb|ELK41562.1| spermidine/putrescine ABC transporter substrate-binding protein
[Brevibacillus agri BAB-2500]
Length = 350
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 15/142 (10%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K ++ P W DLW GR+ M+N PREV+G L G S ++ N D
Sbjct: 139 IAYNKKYVKE---TPTS-WSDLWNEAYKGRVIMLNDPREVMGMALIKNGFSNSTTNKD-- 192
Query: 63 VAGGKISVQQNLALLANQ---ARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVA 119
++++ A L FD+ + + + W+ WS D + +V
Sbjct: 193 ------ELEKSFADLKKMLPGVMAFDTDNIKQKMIAEEAWIGTVWSGDAAIINGQNPDVE 246
Query: 120 VVVPKSGASLWADLWAIPAASR 141
V+PK GA++WAD AIP ++
Sbjct: 247 YVIPKEGATIWADTLAIPKGAK 268
>gi|55823439|ref|YP_141880.1| spermidine/putrescine ABC transporter periplasmic protein
[Streptococcus thermophilus CNRZ1066]
gi|55739424|gb|AAV63065.1| spermidine/putrescine ABC transporter periplasmic protein
[Streptococcus thermophilus CNRZ1066]
Length = 356
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 31/196 (15%)
Query: 19 EDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKI-SVQQNL-A 75
+ W DLW PE +I MV+ REVIG L +G S N+ N+ +L++A K+ S+ N+ A
Sbjct: 155 QHWNDLWSPEYRNQIMMVDGAREVIGFSLNSLGYSLNTKNMTELRLAETKLNSLTPNIKA 214
Query: 76 LLANQARLFDSTHYLKAFGI-GDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 134
++ ++ +K + I GD + V +S + + + ++ VVP G++LW D
Sbjct: 215 IVGDE---------MKGYMIQGDAAIGVTFSGEASEMLDKNEDLRYVVPSEGSNLWFDNL 265
Query: 135 AIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKL 194
IP + E + + +I F L+ A E I A+P+ TL L
Sbjct: 266 VIPKTVKHEKEA------------YAFINFMLKPENAAQ-NAEYIGYATPNEAAKTL--L 310
Query: 195 PEELLKGK---PSQDT 207
P+ + K PS+ T
Sbjct: 311 PKSITNDKAFYPSEST 326
>gi|15644127|ref|NP_229176.1| spermidine/putrescine ABC transporter substrate-binding protein
[Thermotoga maritima MSB8]
gi|418045432|ref|ZP_12683527.1| extracellular solute-binding protein family 1 [Thermotoga maritima
MSB8]
gi|4981936|gb|AAD36445.1|AE001791_7 spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Thermotoga
maritima MSB8]
gi|351676317|gb|EHA59470.1| extracellular solute-binding protein family 1 [Thermotoga maritima
MSB8]
Length = 336
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 91/214 (42%), Gaps = 38/214 (17%)
Query: 21 WKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLAN 79
W R +L GR+++++ REV+G+ LKY+G S N+ N +L+ A Q L N
Sbjct: 145 WSIFDREDLRGRMTLLDDMREVLGAALKYLGYSVNTKNPKELEEAK-----QVVLRWKKN 199
Query: 80 QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN--VAVVVPKSGASLWADLWAIP 137
A+ FD++ Y G+ WV G++ DV + +PK G +LW D IP
Sbjct: 200 IAK-FDASSYADGIVSGEYWVVHGYAEDVYQRIPEGEEKYFDFFIPKEGGTLWIDNMVIP 258
Query: 138 AASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEE 197
++ L +++I F L+ A A + LP
Sbjct: 259 KGAK------------NVDLAYKFINFILEPENA--------------AKIADYLGLPSP 292
Query: 198 LLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEA 231
++ + T I + E L CEF+E + EA
Sbjct: 293 NVEARKYMQTEPIYTI---EDLKNCEFIEDVGEA 323
>gi|224582727|ref|YP_002636525.1| putrescine ABC transporter periplasmic-binding protein [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
gi|375118328|ref|ZP_09763495.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Dublin str. SD3246]
gi|224467254|gb|ACN45084.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
gi|326622595|gb|EGE28940.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Dublin str. SD3246]
Length = 380
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 165 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL 223
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N++ +PK
Sbjct: 224 ---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPK 280
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 281 EGAMAFFDVFAMPADAK 297
>gi|254362547|ref|ZP_04978648.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Mannheimia haemolytica
PHL213]
gi|153094148|gb|EDN75044.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Mannheimia haemolytica
PHL213]
Length = 323
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 31/229 (13%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IA+ + ++ W DLW+PE AG++ +++ REV L +G + N+ N D +
Sbjct: 111 IAFNTADYKGETFT---SWGDLWKPEFAGKVQLLDDAREVFNIALLKLGKNPNTTNPD-E 166
Query: 63 VAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVV 122
+ + L L F S + +F G+V V W+ V A K + V +V
Sbjct: 167 IK----EAFEELKKLRPNVLSFTSDNPANSFIAGEVSVGQLWNGSVRIAKKENAPVDMVF 222
Query: 123 PKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGA 182
PK G LW D AIPA ++ + H+ I + L A ++ +
Sbjct: 223 PKEGPVLWVDTLAIPANAKNKEN------------AHKLINYLLSAKVA---EKLTLAIG 267
Query: 183 SPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEA 231
P++ L LP+E+ ++DT + P AE+L + ++ + + +A
Sbjct: 268 YPTSNVEALKVLPKEI-----TEDTAI---YPSAEVLQKSQWQDDVGDA 308
>gi|56414033|ref|YP_151108.1| putrescine ABC transporter periplasmic protein [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|56128290|gb|AAV77796.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
Length = 370
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 155 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N++ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|78358712|ref|YP_390161.1| ABC transporter substrate-binding protein [Desulfovibrio alaskensis
G20]
gi|78221117|gb|ABB40466.1| extracellular solute-binding protein family 1 [Desulfovibrio
alaskensis G20]
Length = 348
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 5/122 (4%)
Query: 16 APIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLA 75
A + W DL RPE G+I + + R+ +G L G S NS + D ++ ++Q
Sbjct: 146 ASVTSWHDLLRPEFKGKIILSDDLRDTMGMALLATGHSVNSRS-DAELKEAYEFLKQ--- 201
Query: 76 LLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWA 135
L R+FD T +AF +V + + W+ D + M N+ + P+ GA LW D
Sbjct: 202 -LYPSVRVFDVTATKQAFASEEVIIGMSWNGDATVLTQEMPNLQYIYPREGAPLWLDSLC 260
Query: 136 IP 137
IP
Sbjct: 261 IP 262
>gi|344343930|ref|ZP_08774796.1| extracellular solute-binding protein family 1 [Marichromatium
purpuratum 984]
gi|343804541|gb|EGV22441.1| extracellular solute-binding protein family 1 [Marichromatium
purpuratum 984]
Length = 369
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 96/218 (44%), Gaps = 43/218 (19%)
Query: 17 PIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNS-NNIDLQVAGGKISV 70
P++ W ++ P++A R I++++ P EV + L Y+G NS DL A I
Sbjct: 156 PLDTWALVFDPQIAARLAGCGIALLDDPTEVFSAALAYLGKDPNSLERADLDAAAELIKG 215
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
+ R F S+ Y+ GD+ +A G+S DVL A +R V +P+
Sbjct: 216 ------VYPHIRYFHSSQYISDLANGDLCIAHGYSGDVLQAQERADEAGKGVEVIYRIPR 269
Query: 125 SGASLWADLWAIPAASRLETKQIGGRVRGPSP-LIHQWIEFCLQTARALPFKQEVIPGAS 183
GA++W D+ AIP + P+P H +I LQ A + + + A+
Sbjct: 270 EGAAMWTDVMAIPRDA-------------PNPEAAHAFIAHLLQPA-VIAAVSDYVYYAN 315
Query: 184 PSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILAR 221
P+ T LV + L+ P PPAE+ AR
Sbjct: 316 PNLEATALV---DAALREDPGI-------YPPAEVKAR 343
>gi|312963723|ref|ZP_07778194.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens WH6]
gi|311281758|gb|EFQ60368.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens WH6]
Length = 364
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 65/131 (49%), Gaps = 16/131 (12%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
I+ W L+ PE + +S ++S E++ +VL YMG + NS N D ++
Sbjct: 152 IDSWAVLFEPENMKKLATCGVSFMDSADEMLPAVLNYMGLNPNSTNPD-----DYKKAEE 206
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSG 126
L + F S+ Y+ G++ VA G+S DV A R S N+A V+PK G
Sbjct: 207 KLLKVRPYVTYFHSSKYISDLANGNICVAAGFSGDVFQAKARASEAGKGVNIAYVIPKEG 266
Query: 127 ASLWADLWAIP 137
+LW D+ AIP
Sbjct: 267 GNLWFDVLAIP 277
>gi|161614859|ref|YP_001588824.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|194451476|ref|YP_002044907.1| putrescine ABC transporter substrate-binding protein [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194468593|ref|ZP_03074577.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194736529|ref|YP_002113970.1| putrescine ABC transporter substrate-binding protein [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|195874047|ref|ZP_02700356.2| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197264414|ref|ZP_03164488.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197300890|ref|ZP_02661879.2| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|198245718|ref|YP_002214842.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200389573|ref|ZP_03216184.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|204930077|ref|ZP_03221098.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205357766|ref|ZP_02573227.2| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205358380|ref|ZP_02655841.2| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|205358904|ref|ZP_02665689.2| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205359760|ref|ZP_02831960.2| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|205360691|ref|ZP_02685577.2| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|374981583|ref|ZP_09722907.1| Putrescine ABC transporter putrescine-binding protein PotF
[Salmonella enterica subsp. enterica serovar Typhimurium
str. TN061786]
gi|375000630|ref|ZP_09724970.1| bacterial extracellular solute-binding protein [Salmonella enterica
subsp. enterica serovar Infantis str. SARB27]
gi|375122921|ref|ZP_09768085.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|379700083|ref|YP_005241811.1| putrescine ABC transporter periplasmic-binding protein [Salmonella
enterica subsp. enterica serovar Typhimurium str.
ST4/74]
gi|383495658|ref|YP_005396347.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|386590782|ref|YP_006087182.1| Putrescine ABC transporter putrescine-binding protein PotF
[Salmonella enterica subsp. enterica serovar Heidelberg
str. B182]
gi|417473704|ref|ZP_12169030.1| Putrescine ABC transporter putrescine-binding protein PotF
[Salmonella enterica subsp. enterica serovar Rubislaw
str. A4-653]
gi|161364223|gb|ABX67991.1| hypothetical protein SPAB_02612 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194409780|gb|ACF69999.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194454957|gb|EDX43796.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194712031|gb|ACF91252.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|195630932|gb|EDX49518.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197242669|gb|EDY25289.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197290225|gb|EDY29582.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|197940234|gb|ACH77567.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|199602018|gb|EDZ00564.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|204321071|gb|EDZ06272.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205329670|gb|EDZ16434.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205334766|gb|EDZ21530.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|205340175|gb|EDZ26939.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205343115|gb|EDZ29879.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|205347834|gb|EDZ34465.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|321223239|gb|EFX48308.1| Putrescine ABC transporter putrescine-binding protein PotF
[Salmonella enterica subsp. enterica serovar Typhimurium
str. TN061786]
gi|323129182|gb|ADX16612.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|326627171|gb|EGE33514.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|353075318|gb|EHB41078.1| bacterial extracellular solute-binding protein [Salmonella enterica
subsp. enterica serovar Infantis str. SARB27]
gi|353650107|gb|EHC92566.1| Putrescine ABC transporter putrescine-binding protein PotF
[Salmonella enterica subsp. enterica serovar Rubislaw
str. A4-653]
gi|380462479|gb|AFD57882.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Typhimurium str. 798]
gi|383797826|gb|AFH44908.1| Putrescine ABC transporter putrescine-binding protein PotF
[Salmonella enterica subsp. enterica serovar Heidelberg
str. B182]
Length = 371
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 156 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL 214
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N++ +PK
Sbjct: 215 ---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPK 271
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 272 EGAMAFFDVFAMPADAK 288
>gi|322833214|ref|YP_004213241.1| extracellular solute-binding protein [Rahnella sp. Y9602]
gi|384258392|ref|YP_005402326.1| putrescine ABC transporter periplasmic-binding protein [Rahnella
aquatilis HX2]
gi|321168415|gb|ADW74114.1| extracellular solute-binding protein family 1 [Rahnella sp. Y9602]
gi|380754368|gb|AFE58759.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Rahnella aquatilis HX2]
Length = 369
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 17/138 (12%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P E+ +VL Y+ NS A
Sbjct: 154 APVDSWDLVLKPENLEKLKSCGVSFLDAPAEIYATVLNYLHLDPNSTK-----ASDYTGA 208
Query: 71 QQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVP 123
+L L L R F S+ Y+ GD+ VA+GW+ DV+ A R NVA +P
Sbjct: 209 ANDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVMQAGNRAKEAKNGVNVAYSIP 268
Query: 124 KSGASLWADLWAIPAASR 141
K GA + D++AIPA ++
Sbjct: 269 KEGALAFFDVFAIPADAK 286
>gi|227499864|ref|ZP_03929957.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Anaerococcus tetradius
ATCC 35098]
gi|227217973|gb|EEI83246.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Anaerococcus tetradius
ATCC 35098]
Length = 362
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 104/245 (42%), Gaps = 37/245 (15%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID-- 60
I Y K++ + + WK+LW P+ G I + RE +G L S N+ + D
Sbjct: 143 IIYNTKKYKAEDFSS---WKNLWDPKFKGEILSFDGARETLGIGLLADNLSLNTCDKDKL 199
Query: 61 LQVAGGKISVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVA 119
++V+ + N+ A+LA++ R++ +G+ V + +S D A+ ++A
Sbjct: 200 VRVSNELVGYMANVRAILADEIRMY--------MALGEANVGITFSGDAASAIDSNPDLA 251
Query: 120 VVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVI 179
+PK G+++W D IP S+ + + +I F L+ A E I
Sbjct: 252 YAIPKEGSNIWFDSMVIPKTSK------------NTEAAYAFINFMLRAENAAQ-NAEYI 298
Query: 180 PGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
A+P+ L+ P+ N + P +++ R E + L + T Y L
Sbjct: 299 SYATPNKKALALI---------DPAMRNNKTL-YPDDDVIDRLEVFKALDKKTTILYNDL 348
Query: 240 VADLQ 244
DL+
Sbjct: 349 FLDLK 353
>gi|16764239|ref|NP_459854.1| putrescine ABC transporter periplasmic-binding protein [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|62179440|ref|YP_215857.1| putrescine ABC transporter periplasmic-binding protein [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|197362956|ref|YP_002142593.1| putrescine ABC transporter substrate-binding protein [Salmonella
enterica subsp. enterica serovar Paratyphi A str.
AKU_12601]
gi|205352128|ref|YP_002225929.1| putrescine ABC transporter periplasmic-binding protein [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|207856310|ref|YP_002242961.1| putrescine transporter periplasmic binding protein [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|238913395|ref|ZP_04657232.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|375113763|ref|ZP_09758933.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|378444354|ref|YP_005231986.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|378449260|ref|YP_005236619.1| putrescine ABC transporter periplasmic substrate-binding protein
[Salmonella enterica subsp. enterica serovar Typhimurium
str. 14028S]
gi|378698812|ref|YP_005180769.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|378983477|ref|YP_005246632.1| putrescine ABC transporter dubstrate binding protein [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|378988262|ref|YP_005251426.1| putrescine ABC transporter periplasmic-binding protein [Salmonella
enterica subsp. enterica serovar Typhimurium str. UK-1]
gi|416421925|ref|ZP_11689829.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|416431442|ref|ZP_11695596.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|416441578|ref|ZP_11701790.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|416445354|ref|ZP_11704243.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|416454072|ref|ZP_11710075.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|416459284|ref|ZP_11713793.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|416467335|ref|ZP_11717352.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|416480988|ref|ZP_11723044.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|416489786|ref|ZP_11726398.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|416500390|ref|ZP_11731461.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|416505245|ref|ZP_11733679.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|416523164|ref|ZP_11740911.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|416530431|ref|ZP_11744957.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|416536481|ref|ZP_11748443.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
gi|416546337|ref|ZP_11753823.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|416550445|ref|ZP_11755980.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
gi|416560306|ref|ZP_11761135.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
gi|416570264|ref|ZP_11765925.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 4441 H]
gi|416578438|ref|ZP_11770558.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|416582376|ref|ZP_11772650.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|416593687|ref|ZP_11780093.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|416599414|ref|ZP_11783648.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|416604916|ref|ZP_11786537.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|416612564|ref|ZP_11791589.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|416617975|ref|ZP_11794380.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|416634346|ref|ZP_11802511.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|416640904|ref|ZP_11805226.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|416650149|ref|ZP_11810257.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|416663465|ref|ZP_11816202.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|416669819|ref|ZP_11819662.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|416676218|ref|ZP_11821740.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|416689904|ref|ZP_11825666.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|416707497|ref|ZP_11832595.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|416714795|ref|ZP_11838113.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|416716573|ref|ZP_11838920.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|416730298|ref|ZP_11848549.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|416740458|ref|ZP_11854414.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|416746455|ref|ZP_11857777.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|416752325|ref|ZP_11860301.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|416760881|ref|ZP_11865089.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|416767412|ref|ZP_11869885.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|418483765|ref|ZP_13052771.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 80959-06]
gi|418491741|ref|ZP_13058249.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|418493962|ref|ZP_13060422.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|418500081|ref|ZP_13066480.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|418501903|ref|ZP_13068279.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|418509720|ref|ZP_13076012.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|418526741|ref|ZP_13092710.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
gi|418763546|ref|ZP_13319661.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|418765268|ref|ZP_13321358.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|418769432|ref|ZP_13325462.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|418773483|ref|ZP_13329467.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|418779533|ref|ZP_13335433.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|418784861|ref|ZP_13340697.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|418790736|ref|ZP_13346506.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19447]
gi|418791919|ref|ZP_13347670.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19449]
gi|418798868|ref|ZP_13354541.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19567]
gi|418803599|ref|ZP_13359217.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|419728021|ref|ZP_14254989.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|419736814|ref|ZP_14263640.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|419739303|ref|ZP_14266052.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|419742482|ref|ZP_14269155.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|419790942|ref|ZP_14316608.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|419794479|ref|ZP_14320091.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|421358050|ref|ZP_15808357.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 622731-39]
gi|421364722|ref|ZP_15814953.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|421367512|ref|ZP_15817705.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|421370304|ref|ZP_15820470.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|421377749|ref|ZP_15827839.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-6]
gi|421382421|ref|ZP_15832468.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 485549-17]
gi|421386157|ref|ZP_15836172.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-22]
gi|421392078|ref|ZP_15842039.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-70]
gi|421393082|ref|ZP_15843029.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-26]
gi|421398990|ref|ZP_15848894.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-37]
gi|421404899|ref|ZP_15854735.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-46]
gi|421408034|ref|ZP_15857840.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-50]
gi|421411154|ref|ZP_15860922.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|421419135|ref|ZP_15868831.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-2659]
gi|421421415|ref|ZP_15871083.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 78-1757]
gi|421425409|ref|ZP_15875045.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22510-1]
gi|421432308|ref|ZP_15881884.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 8b-1]
gi|421434533|ref|ZP_15884082.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648905 5-18]
gi|421438876|ref|ZP_15888370.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|421446432|ref|ZP_15895844.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-3079]
gi|421450803|ref|ZP_15900173.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 58-6482]
gi|421569155|ref|ZP_16014859.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
gi|421573492|ref|ZP_16019128.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|421580051|ref|ZP_16025612.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|421584809|ref|ZP_16030316.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
gi|421887310|ref|ZP_16318470.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|422025028|ref|ZP_16371490.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm1]
gi|422030051|ref|ZP_16376285.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm2]
gi|427547363|ref|ZP_18926799.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
gi|427563384|ref|ZP_18931565.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm9]
gi|427582316|ref|ZP_18936321.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm3]
gi|427604668|ref|ZP_18941164.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm4]
gi|427629463|ref|ZP_18946067.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm6]
gi|427652696|ref|ZP_18950833.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm10]
gi|427660264|ref|ZP_18955780.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm11]
gi|427665392|ref|ZP_18960538.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm12]
gi|427744530|ref|ZP_18965557.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
gi|436637409|ref|ZP_20516058.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22704]
gi|436794612|ref|ZP_20522167.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|436811702|ref|ZP_20530582.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1882]
gi|436816074|ref|ZP_20533625.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1884]
gi|436839222|ref|ZP_20537542.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|436851669|ref|ZP_20542268.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|436858431|ref|ZP_20546951.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|436865607|ref|ZP_20551574.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|436875219|ref|ZP_20557126.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|436879091|ref|ZP_20559482.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1810]
gi|436884912|ref|ZP_20562310.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|436896727|ref|ZP_20569483.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|436906706|ref|ZP_20575552.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|436911343|ref|ZP_20577172.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1729]
gi|436918580|ref|ZP_20581726.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|436930796|ref|ZP_20589021.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|436933035|ref|ZP_20589474.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|436942485|ref|ZP_20595431.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1747]
gi|436947926|ref|ZP_20598332.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|436963547|ref|ZP_20605824.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|436969843|ref|ZP_20608758.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|436977547|ref|ZP_20612325.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|436995527|ref|ZP_20619252.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|437005278|ref|ZP_20622370.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1808]
gi|437022867|ref|ZP_20628732.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1811]
gi|437032170|ref|ZP_20631814.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|437041909|ref|ZP_20635814.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|437050133|ref|ZP_20640414.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|437055320|ref|ZP_20643463.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1725]
gi|437068624|ref|ZP_20650755.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1745]
gi|437077584|ref|ZP_20655483.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1791]
gi|437086927|ref|ZP_20660936.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1795]
gi|437088565|ref|ZP_20661602.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 576709]
gi|437112201|ref|ZP_20668584.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 635290-58]
gi|437124140|ref|ZP_20673211.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|437134227|ref|ZP_20678651.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|437138097|ref|ZP_20680827.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-2]
gi|437147716|ref|ZP_20686998.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-9]
gi|437156152|ref|ZP_20692077.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629163]
gi|437161611|ref|ZP_20695547.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|437166342|ref|ZP_20697995.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_N202]
gi|437177620|ref|ZP_20704100.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_56-3991]
gi|437185424|ref|ZP_20708998.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_76-3618]
gi|437194019|ref|ZP_20710930.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13183-1]
gi|437260873|ref|ZP_20717943.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_81-2490]
gi|437267092|ref|ZP_20721058.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL909]
gi|437276451|ref|ZP_20726460.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL913]
gi|437300328|ref|ZP_20733092.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_69-4941]
gi|437311231|ref|ZP_20735826.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 638970-15]
gi|437325736|ref|ZP_20740008.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 17927]
gi|437336472|ref|ZP_20743079.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS4]
gi|437356934|ref|ZP_20748005.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22558]
gi|437420137|ref|ZP_20754514.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 22-17]
gi|437448468|ref|ZP_20759210.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 40-18]
gi|437467937|ref|ZP_20764579.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 1-1]
gi|437489622|ref|ZP_20770407.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642046 4-7]
gi|437512799|ref|ZP_20777354.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648898 4-5]
gi|437537514|ref|ZP_20781772.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648899 3-17]
gi|437556094|ref|ZP_20784931.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|437575498|ref|ZP_20790294.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|437595047|ref|ZP_20795806.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|437607023|ref|ZP_20800041.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|437622005|ref|ZP_20804515.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|437647434|ref|ZP_20809247.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648904 3-6]
gi|437659091|ref|ZP_20812018.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|437678584|ref|ZP_20817786.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 8-1]
gi|437688682|ref|ZP_20819912.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
gi|437712900|ref|ZP_20827276.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 42-20]
gi|437732320|ref|ZP_20831575.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
gi|437772380|ref|ZP_20835729.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 76-2651]
gi|437803977|ref|ZP_20838692.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 33944]
gi|438089680|ref|ZP_20860263.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 81-2625]
gi|438104700|ref|ZP_20865964.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 62-1976]
gi|438114131|ref|ZP_20869907.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 53-407]
gi|445139775|ref|ZP_21384533.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|445152484|ref|ZP_21390867.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
gi|445177638|ref|ZP_21397760.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE8a]
gi|445228210|ref|ZP_21404615.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|445327766|ref|ZP_21412766.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|445346380|ref|ZP_21418750.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|445367420|ref|ZP_21425547.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
gi|452120916|ref|YP_007471164.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Javiana str. CFSAN001992]
gi|16419385|gb|AAL19813.1| ABC superfamily (peri_perm), putrescine transporter [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|62127073|gb|AAX64776.1| ABC superfamily (peri_perm), putrescine transporter [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|197094433|emb|CAR59949.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Paratyphi A str.
AKU_12601]
gi|205271909|emb|CAR36751.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|206708113|emb|CAR32406.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|261246133|emb|CBG23936.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Typhimurium str.
D23580]
gi|267992638|gb|ACY87523.1| putrescine ABC transporter periplasmic substrate-binding protein
[Salmonella enterica subsp. enterica serovar Typhimurium
str. 14028S]
gi|301157460|emb|CBW16950.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Typhimurium str.
SL1344]
gi|312911905|dbj|BAJ35879.1| putrescine ABC transporter dubstrate binding protein [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|322616352|gb|EFY13261.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322619602|gb|EFY16477.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322622702|gb|EFY19547.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322628614|gb|EFY25401.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322631551|gb|EFY28307.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322637078|gb|EFY33781.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322641723|gb|EFY38359.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322644484|gb|EFY41024.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322650055|gb|EFY46472.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322654152|gb|EFY50475.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322658067|gb|EFY54334.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322663541|gb|EFY59743.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322670277|gb|EFY66417.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322671513|gb|EFY67635.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322676869|gb|EFY72936.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322682794|gb|EFY78813.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322686473|gb|EFY82455.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|322713909|gb|EFZ05480.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|323196073|gb|EFZ81236.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323196781|gb|EFZ81925.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323202940|gb|EFZ87974.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323209702|gb|EFZ94629.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323215183|gb|EFZ99928.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323222386|gb|EGA06764.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323227510|gb|EGA11670.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323229861|gb|EGA13984.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323233086|gb|EGA17182.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323240821|gb|EGA24863.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323248680|gb|EGA32608.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323251681|gb|EGA35548.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323257331|gb|EGA41029.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323263906|gb|EGA47424.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323267935|gb|EGA51414.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323271998|gb|EGA55413.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|332987809|gb|AEF06792.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|363550811|gb|EHL35137.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|363550883|gb|EHL35208.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|363556179|gb|EHL40394.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|363564802|gb|EHL48843.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
gi|363568401|gb|EHL52381.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
gi|363574981|gb|EHL58840.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
gi|363575548|gb|EHL59398.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 4441 H]
gi|366060306|gb|EHN24570.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|366060740|gb|EHN25000.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 80959-06]
gi|366063209|gb|EHN27429.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|366069548|gb|EHN33671.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|366076350|gb|EHN40388.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|366077815|gb|EHN41824.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|366828332|gb|EHN55219.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|372205349|gb|EHP18864.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
gi|379983026|emb|CCF90743.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|381290488|gb|EIC31753.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|381299395|gb|EIC40468.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|381301603|gb|EIC42659.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|381313777|gb|EIC54556.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|392612685|gb|EIW95154.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|392614781|gb|EIW97225.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|392733014|gb|EIZ90220.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|392739728|gb|EIZ96860.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|392741421|gb|EIZ98526.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|392752105|gb|EJA09047.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|392753565|gb|EJA10494.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|392753857|gb|EJA10778.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|392757049|gb|EJA13940.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19447]
gi|392765510|gb|EJA22296.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19567]
gi|392769452|gb|EJA26185.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19449]
gi|392772694|gb|EJA29394.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|395982950|gb|EJH92144.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|395986032|gb|EJH95196.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|395989145|gb|EJH98280.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 622731-39]
gi|395998026|gb|EJI07064.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-6]
gi|395998328|gb|EJI07360.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 485549-17]
gi|396006856|gb|EJI15817.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|396009758|gb|EJI18681.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-70]
gi|396014776|gb|EJI23661.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-22]
gi|396019333|gb|EJI28190.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-26]
gi|396024746|gb|EJI33531.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-46]
gi|396029164|gb|EJI37903.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-50]
gi|396029434|gb|EJI38171.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-37]
gi|396036643|gb|EJI45302.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-2659]
gi|396040730|gb|EJI49353.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 78-1757]
gi|396046688|gb|EJI55271.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|396050699|gb|EJI59221.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 8b-1]
gi|396057879|gb|EJI66349.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22510-1]
gi|396060284|gb|EJI68730.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648905 5-18]
gi|396062014|gb|EJI70427.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-3079]
gi|396065299|gb|EJI73676.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 58-6482]
gi|396072104|gb|EJI80419.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|402520530|gb|EJW27872.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|402527509|gb|EJW34770.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
gi|402527751|gb|EJW35011.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|402530781|gb|EJW37995.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
gi|414022365|gb|EKT05851.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
gi|414022428|gb|EKT05913.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm1]
gi|414023991|gb|EKT07396.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm2]
gi|414036091|gb|EKT18934.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm9]
gi|414037519|gb|EKT20288.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm3]
gi|414040678|gb|EKT23286.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm4]
gi|414050707|gb|EKT32869.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm10]
gi|414051941|gb|EKT34019.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm6]
gi|414056183|gb|EKT38021.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm11]
gi|414061132|gb|EKT42575.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm12]
gi|414066661|gb|EKT47180.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
gi|434957552|gb|ELL51185.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22704]
gi|434962641|gb|ELL55817.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|434964333|gb|ELL57355.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1882]
gi|434974190|gb|ELL66578.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1884]
gi|434980530|gb|ELL72451.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|434986971|gb|ELL78622.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|434990583|gb|ELL82133.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|434994810|gb|ELL86127.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|434996642|gb|ELL87958.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|435007074|gb|ELL97931.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1810]
gi|435013094|gb|ELM03754.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|435015283|gb|ELM05840.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|435016616|gb|ELM07142.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|435025588|gb|ELM15719.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1729]
gi|435030578|gb|ELM20587.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|435032451|gb|ELM22395.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|435042684|gb|ELM32401.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1747]
gi|435044090|gb|ELM33788.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|435048796|gb|ELM38352.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|435056664|gb|ELM46035.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|435058613|gb|ELM47934.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|435062969|gb|ELM52141.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|435070760|gb|ELM59742.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|435071618|gb|ELM60558.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1808]
gi|435076125|gb|ELM64921.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1811]
gi|435080106|gb|ELM68799.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|435085173|gb|ELM73727.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|435095115|gb|ELM83452.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1745]
gi|435095274|gb|ELM83592.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|435098662|gb|ELM86893.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1725]
gi|435103073|gb|ELM91176.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1795]
gi|435103288|gb|ELM91383.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1791]
gi|435116600|gb|ELN04335.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 576709]
gi|435116879|gb|ELN04593.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 635290-58]
gi|435119706|gb|ELN07308.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|435120494|gb|ELN08072.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|435133819|gb|ELN20975.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-9]
gi|435134034|gb|ELN21178.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-2]
gi|435136931|gb|ELN24003.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629163]
gi|435144668|gb|ELN31500.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|435153000|gb|ELN39621.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_N202]
gi|435155300|gb|ELN41858.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_56-3991]
gi|435159477|gb|ELN45798.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_76-3618]
gi|435163329|gb|ELN49465.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_81-2490]
gi|435173809|gb|ELN59278.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL913]
gi|435176244|gb|ELN61634.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL909]
gi|435178731|gb|ELN63928.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_69-4941]
gi|435183993|gb|ELN68939.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 638970-15]
gi|435192975|gb|ELN77478.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 17927]
gi|435197541|gb|ELN81824.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS4]
gi|435201339|gb|ELN85251.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 22-17]
gi|435209066|gb|ELN92444.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 40-18]
gi|435211472|gb|ELN94574.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22558]
gi|435215386|gb|ELN98073.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 1-1]
gi|435229420|gb|ELO10784.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13183-1]
gi|435230491|gb|ELO11797.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648898 4-5]
gi|435231624|gb|ELO12853.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642046 4-7]
gi|435239890|gb|ELO20323.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648899 3-17]
gi|435241635|gb|ELO21977.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|435245463|gb|ELO25550.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|435251318|gb|ELO30947.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|435254229|gb|ELO33632.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|435256225|gb|ELO35570.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|435270143|gb|ELO48647.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|435270614|gb|ELO49109.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648904 3-6]
gi|435273279|gb|ELO51621.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 8-1]
gi|435282427|gb|ELO60045.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
gi|435287183|gb|ELO64398.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 42-20]
gi|435288224|gb|ELO65274.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
gi|435303087|gb|ELO79005.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 33944]
gi|435305634|gb|ELO81084.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 76-2651]
gi|435316876|gb|ELO89959.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 81-2625]
gi|435321996|gb|ELO94337.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 62-1976]
gi|435329155|gb|ELP00608.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 53-407]
gi|444853073|gb|ELX78145.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|444854275|gb|ELX79340.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
gi|444855893|gb|ELX80932.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE8a]
gi|444866305|gb|ELX91038.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|444878046|gb|ELY02174.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|444880544|gb|ELY04618.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|444882367|gb|ELY06333.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
gi|451909920|gb|AGF81726.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Javiana str. CFSAN001992]
Length = 370
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 155 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N++ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|402814635|ref|ZP_10864229.1| spermidine/putrescine-binding periplasmic protein 2 [Paenibacillus
alvei DSM 29]
gi|402508482|gb|EJW19003.1| spermidine/putrescine-binding periplasmic protein 2 [Paenibacillus
alvei DSM 29]
Length = 348
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 72/140 (51%), Gaps = 11/140 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNS-NNIDL 61
IAY +K+ K AP DW DLW+ E G++ +++ RE+IG LK G S +S N D+
Sbjct: 137 IAYN-TKYVKQ--APT-DWADLWKDEYKGKVLLLDDNREIIGMALKKAGKSNSSENEADI 192
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
A +L L FD+ + + + W+ WS D +VA +
Sbjct: 193 NAA------VDDLRKLVPNVLAFDTDNIKQKMIAEEGWIGTVWSGDASVIHGENPDVAFM 246
Query: 122 VPKSGASLWADLWAIPAASR 141
+PK+G+++++D +AIP S+
Sbjct: 247 IPKTGSTIFSDNYAIPKGSK 266
>gi|417325284|ref|ZP_12111298.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Adelaide
str. A4-669]
gi|353576540|gb|EHC38965.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Adelaide
str. A4-669]
Length = 347
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 156 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL 214
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N++ +PK
Sbjct: 215 ---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPK 271
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 272 EGAMAFFDVFAMPADAK 288
>gi|440764387|ref|ZP_20943415.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Agona str. SH11G1113]
gi|440769465|ref|ZP_20948423.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Agona str. SH08SF124]
gi|440770940|ref|ZP_20949868.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Agona str. SH10GFN094]
gi|436414553|gb|ELP12481.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Agona str. SH08SF124]
gi|436416537|gb|ELP14442.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Agona str. SH11G1113]
gi|436423512|gb|ELP21323.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Agona str. SH10GFN094]
Length = 370
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 155 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N++ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|401762953|ref|YP_006577960.1| putrescine ABC transporter periplasmic-binding protein
[Enterobacter cloacae subsp. cloacae ENHKU01]
gi|400174487|gb|AFP69336.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Enterobacter cloacae subsp. cloacae
ENHKU01]
Length = 370
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 17/155 (10%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
++ W + +PE + +S +++P E+ +VL Y+G NSN D G +
Sbjct: 157 LDSWDVVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSNKAD-DYTGPATDL-- 213
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSG 126
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK G
Sbjct: 214 -LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEG 272
Query: 127 ASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH 159
A + D++A+P A ++ E Q + P + H
Sbjct: 273 ALAFFDVFAMPADAKNKDEAYQFLNYLMRPDVIAH 307
>gi|437834124|ref|ZP_20844892.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SARB17]
gi|435301414|gb|ELO77442.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. SARB17]
Length = 240
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 25 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL 83
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N++ +PK
Sbjct: 84 ---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPK 140
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 141 EGAMAFFDVFAMPADAK 157
>gi|437473908|ref|ZP_20766015.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 4-1]
gi|435224831|gb|ELO06780.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 4-1]
Length = 383
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 168 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL 226
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N++ +PK
Sbjct: 227 ---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPK 283
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 284 EGAMAFFDVFAMPADAK 300
>gi|417389662|ref|ZP_12153396.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Minnesota
str. A4-603]
gi|353621258|gb|EHC71130.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Minnesota
str. A4-603]
Length = 339
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 156 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL 214
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N++ +PK
Sbjct: 215 ---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPK 271
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 272 EGAMAFFDVFAMPADAK 288
>gi|401678958|ref|ZP_10810908.1| family 1 extracellular solute-binding protein [Enterobacter sp.
SST3]
gi|400213809|gb|EJO44745.1| family 1 extracellular solute-binding protein [Enterobacter sp.
SST3]
Length = 370
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
++ W + +PE + +S +++P E+ +VL Y+G NSN D G +
Sbjct: 157 LDSWDVVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSNKAD-DYTGPATDL-- 213
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSG 126
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK G
Sbjct: 214 -LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEG 272
Query: 127 ASLWADLWAIPAASR 141
A + D++A+PA ++
Sbjct: 273 ALAFFDVFAMPADAK 287
>gi|197247643|ref|YP_002145831.1| putrescine ABC transporter substrate-binding protein [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|197211346|gb|ACH48743.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
Length = 371
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 156 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL 214
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N++ +PK
Sbjct: 215 ---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPK 271
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 272 EGAMAFFDVFAMPADAK 288
>gi|383310635|ref|YP_005363445.1| spermidine/putrescine-binding periplasmic protein PotD1
[Pasteurella multocida subsp. multocida str. HN06]
gi|380871907|gb|AFF24274.1| spermidine/putrescine-binding periplasmic protein PotD1
[Pasteurella multocida subsp. multocida str. HN06]
Length = 348
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 101/230 (43%), Gaps = 33/230 (14%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IA+ ++ N W DLW+PE G++ +++ REV L +G N+ +
Sbjct: 136 IAFNTDSYKGENFTA---WGDLWKPEFKGKVQLLDDAREVFNIALLKLGQDPNTTD---- 188
Query: 63 VAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVV 122
A K + ++ L L N F+S + +F G+V V W+ V A K + + +V
Sbjct: 189 PAIIKQAYEELLKLRPNVLS-FNSDNPANSFISGEVEVGQLWNGSVRIAKKEQAPLNMVF 247
Query: 123 PKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEV-IPG 181
PK G LW D AIPA S + P H+ I + L A +E+ P
Sbjct: 248 PKEGPVLWVDTLAIPANS-----------KNPDA-AHKLINYLLSAKVAAQLAEEIGYPT 295
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEA 231
++ ALE LP E+ +QD + P AEIL + + + +A
Sbjct: 296 SNLKALEL----LPSEV-----TQDPAV---YPTAEILQNSHWQDDVGDA 333
>gi|359299977|ref|ZP_09185816.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Haemophilus [parainfluenzae] CCUG 13788]
gi|402305490|ref|ZP_10824549.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
sputorum HK 2154]
gi|400376603|gb|EJP29490.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
sputorum HK 2154]
Length = 359
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 104/230 (45%), Gaps = 33/230 (14%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDL 61
IA+ + ++ W DLW+PE A ++ +++ REV L +G + N+ + ++
Sbjct: 147 IAFNTNDYKGDQFT---SWGDLWKPEFANKVQLLDDAREVFNIALLKLGKNPNTTDPAEI 203
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ A + L L + F+S + +F G+V V W+ V A K + + +V
Sbjct: 204 KEAF------EELKKLRSNVLSFNSDNPANSFISGEVSVGQLWNGSVRIAKKEKAPIDMV 257
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
PK G LW D AIPA S+ + H+ I + L + + KQ +
Sbjct: 258 FPKEGPVLWVDTLAIPANSKNKEN------------AHKLINYLLSASVS---KQLTLEI 302
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEA 231
P++ L +LP+E+ +QD + P AEIL + + + + +A
Sbjct: 303 GYPTSNVKALEELPKEI-----TQDPAI---YPTAEILQKSHWQDDVGDA 344
>gi|304440193|ref|ZP_07400083.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Peptoniphilus duerdenii
ATCC BAA-1640]
gi|304371242|gb|EFM24858.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Peptoniphilus duerdenii
ATCC BAA-1640]
Length = 353
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 98/242 (40%), Gaps = 38/242 (15%)
Query: 1 MVIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNS-NNI 59
M I Y K+ + P WKDLW PE +I M NS R+ I LK +G S NS +
Sbjct: 137 MGIVYNKTMVK----TPPTSWKDLWNPEYKRQIIMYNSQRDSIAIALKMLGYSMNSVDPF 192
Query: 60 DLQVAGGKISVQQNL--ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN 117
+LQ A + Q+ L A L + R GD + +S D + +
Sbjct: 193 ELQEAKEALIEQKPLVYAYLTDDGR--------DVMVQGDGAIMPMYSGDAAYMISENKD 244
Query: 118 VAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQE 177
+ V+PK GA++W D IP + K + G H++I + L+ +
Sbjct: 245 LDYVIPKEGANIWMDSMCIPK----DAKNVDGA--------HEFINYLLRKDVGILNADY 292
Query: 178 VIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSE-ATLSDY 236
+ SP ++ LPEEL K V P L E+ + L E + L D
Sbjct: 293 CMGYTSP--IKGVKEGLPEELRNSK--------VAYPDYNHLPPLEYFKDLGENSKLYDR 342
Query: 237 EW 238
W
Sbjct: 343 IW 344
>gi|417347886|ref|ZP_12126976.1| Putrescine ABC transporter putrescine-binding protein potF, partial
[Salmonella enterica subsp. enterica serovar Gaminara
str. A4-567]
gi|417517138|ref|ZP_12179859.1| Putrescine ABC transporter putrescine-binding protein potF, partial
[Salmonella enterica subsp. enterica serovar Uganda str.
R8-3404]
gi|417538032|ref|ZP_12190746.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Wandsworth
str. A4-580]
gi|353577100|gb|EHC39369.1| Putrescine ABC transporter putrescine-binding protein potF, partial
[Salmonella enterica subsp. enterica serovar Gaminara
str. A4-567]
gi|353652358|gb|EHC94212.1| Putrescine ABC transporter putrescine-binding protein potF, partial
[Salmonella enterica subsp. enterica serovar Uganda str.
R8-3404]
gi|353667371|gb|EHD04907.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Wandsworth
str. A4-580]
Length = 339
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 156 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL 214
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N++ +PK
Sbjct: 215 ---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPK 271
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 272 EGAMAFFDVFAMPADAK 288
>gi|55821511|ref|YP_139953.1| putrescine/spermidine ABC transporter subtrate-binding protein
[Streptococcus thermophilus LMG 18311]
gi|55737496|gb|AAV61138.1| Polyamine (putrescine/spermidine) ABC uptake transporter subtrate
binding protein [Streptococcus thermophilus LMG 18311]
Length = 356
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 31/196 (15%)
Query: 19 EDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKI-SVQQNL-A 75
+ W DLW PE +I MV+ REVIG L +G S N+ N+ +L++A K+ S+ N+ A
Sbjct: 155 QHWNDLWSPEYRNQIMMVDGAREVIGFSLNSLGYSLNTKNMTELRLAETKLNSLTPNIKA 214
Query: 76 LLANQARLFDSTHYLKAFGI-GDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 134
++ ++ +K + I GD + V +S + + + ++ VVP G++LW D
Sbjct: 215 IVGDE---------MKGYMIQGDAAIGVTFSGEASEMLDKNEDLRYVVPSEGSNLWFDNL 265
Query: 135 AIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKL 194
IP + E + + +I F L+ A E I A+P+ TL L
Sbjct: 266 VIPKTVKHEKEA------------YAFINFMLKPENAAQ-NAEYIGYATPNEAAKTL--L 310
Query: 195 PEELLKGK---PSQDT 207
P+ + K PS+ T
Sbjct: 311 PKSITNDKAFYPSEST 326
>gi|417528396|ref|ZP_12185034.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Urbana str.
R8-2977]
gi|353668092|gb|EHD05386.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Urbana str.
R8-2977]
Length = 340
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 156 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL 214
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N++ +PK
Sbjct: 215 ---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPK 271
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 272 EGAMAFFDVFAMPADAK 288
>gi|148270537|ref|YP_001244997.1| extracellular solute-binding protein [Thermotoga petrophila RKU-1]
gi|281412845|ref|YP_003346924.1| extracellular solute-binding protein family 1 [Thermotoga
naphthophila RKU-10]
gi|147736081|gb|ABQ47421.1| extracellular solute-binding protein, family 1 [Thermotoga
petrophila RKU-1]
gi|281373948|gb|ADA67510.1| extracellular solute-binding protein family 1 [Thermotoga
naphthophila RKU-10]
Length = 336
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 91/214 (42%), Gaps = 38/214 (17%)
Query: 21 WKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLAN 79
W R +L GR+++++ REV+G+ LKY+G S N+ N +L+ A Q L N
Sbjct: 145 WSIFDREDLRGRMTLLDDMREVLGAALKYLGYSVNTKNPKELEEAK-----QVVLRWKKN 199
Query: 80 QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV--KRMSNVAVVVPKSGASLWADLWAIP 137
A+ FD++ Y G+ WV G++ DV + +PK G +LW D IP
Sbjct: 200 IAK-FDASSYADGVVSGEYWVVHGYAEDVYQRIPEGEEEYFDFFIPKEGGTLWIDNMVIP 258
Query: 138 AASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEE 197
++ L +++I F L+ A A + LP
Sbjct: 259 KGAK------------NVDLAYKFINFILEPENA--------------AKIADYLGLPSP 292
Query: 198 LLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEA 231
++ + T I + E L CEF+E + EA
Sbjct: 293 NVEARKYMQTEPIYTI---EDLKNCEFIEDVGEA 323
>gi|116628225|ref|YP_820844.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
thermophilus LMD-9]
gi|386087136|ref|YP_006003010.1| Polyamine (Putrescine/spermidine) ABC uptake transporter subtrate
binding protein [Streptococcus thermophilus ND03]
gi|386345215|ref|YP_006041379.1| polyamine (Putrescine/spermidine) ABC uptake transporter subtrate
binding protein [Streptococcus thermophilus JIM 8232]
gi|387910236|ref|YP_006340542.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
thermophilus MN-ZLW-002]
gi|116101502|gb|ABJ66648.1| Spermidine/putrescine-binding periplasmic protein [Streptococcus
thermophilus LMD-9]
gi|312278849|gb|ADQ63506.1| Polyamine (Putrescine/spermidine) ABC uptake transporter subtrate
binding protein [Streptococcus thermophilus ND03]
gi|339278676|emb|CCC20424.1| polyamine (Putrescine/spermidine) ABC uptake transporter subtrate
binding protein [Streptococcus thermophilus JIM 8232]
gi|387575171|gb|AFJ83877.1| spermidine/putrescine-binding periplasmic protein [Streptococcus
thermophilus MN-ZLW-002]
Length = 355
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 31/196 (15%)
Query: 19 EDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKI-SVQQNL-A 75
+ W DLW PE +I MV+ REVIG L +G S N+ N+ +L++A K+ S+ N+ A
Sbjct: 154 QHWNDLWSPEYRNQIMMVDGAREVIGFSLNSLGYSLNTKNMTELRLAETKLNSLTPNIKA 213
Query: 76 LLANQARLFDSTHYLKAFGI-GDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 134
++ ++ +K + I GD + V +S + + + ++ VVP G++LW D
Sbjct: 214 IVGDE---------MKGYMIQGDAAIGVTFSGEASEMLDKNEDLRYVVPSEGSNLWFDNL 264
Query: 135 AIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKL 194
IP + E + + +I F L+ A E I A+P+ TL L
Sbjct: 265 VIPKTVKHEKEA------------YAFINFMLKPENAAQ-NAEYIGYATPNEAAKTL--L 309
Query: 195 PEELLKGK---PSQDT 207
P+ + K PS+ T
Sbjct: 310 PKSITNDKAFYPSEST 325
>gi|418510965|ref|ZP_13077235.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
gi|366085214|gb|EHN49104.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
Length = 370
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 155 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N++ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|417372044|ref|ZP_12142440.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Inverness
str. R8-3668]
gi|417382044|ref|ZP_12148128.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
gi|417509588|ref|ZP_12174719.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Senftenberg
str. A4-543]
gi|353606362|gb|EHC60607.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Inverness
str. R8-3668]
gi|353616115|gb|EHC67456.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
gi|353648906|gb|EHC91680.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Senftenberg
str. A4-543]
Length = 340
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 156 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL 214
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N++ +PK
Sbjct: 215 ---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPK 271
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 272 EGAMAFFDVFAMPADAK 288
>gi|429767047|ref|ZP_19299270.1| putrescine ABC transporter, periplasmic spermidine [Clostridium
celatum DSM 1785]
gi|429182101|gb|EKY23225.1| putrescine ABC transporter, periplasmic spermidine [Clostridium
celatum DSM 1785]
Length = 350
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 100/229 (43%), Gaps = 30/229 (13%)
Query: 17 PIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNS-NNIDLQVAGGKISVQQNLA 75
PI+ W+ +W PE I +++S R+ IG LK +G S NS N+ +L+ A + Q+ L
Sbjct: 150 PIDSWEAMWSPEYKDEIFVLDSQRDAIGMALKKLGYSINSTNSAELEEAKKALIEQKEL- 208
Query: 76 LLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWA 135
++ + + G+ +A+ WS + L +N+ +VPK GA+ W D
Sbjct: 209 -----GTIYGADNVKDLMISGERAIAMIWSGEGLTLADEYNNLEYIVPKEGANFWIDSLV 263
Query: 136 IPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLP 195
IP G + I +I F A +E I +P+
Sbjct: 264 IPK----------GTANKDAAEI--FINFLCAKDSAYRIAEE-IGYTTPN---------- 300
Query: 196 EELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVADLQ 244
+E +K +P N P E++ +CE + L++ L Y+ + D++
Sbjct: 301 KEAMKEQPDSVKNNPGAYMPKEVMDKCEGYKYLTQDELQMYDAIWMDVK 349
>gi|398853858|ref|ZP_10610447.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM80]
gi|398238126|gb|EJN23862.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM80]
Length = 365
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W L+ PE + ++ ++S E++ +VL YMG + NS N D + A K
Sbjct: 153 IDSWGVLFEPENIKKLQSCGVAFLDSADEMMPTVLNYMGLNANSTNPKDYEKATAK---- 208
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
L + F S+ Y+ GD+ VA+G+S D+ A R + N+A VPK
Sbjct: 209 --LLAVRPYVTYFHSSKYIGDLANGDICVAIGFSGDIFQAKNRAAEAKKGVNIAYTVPKE 266
Query: 126 GASLWADLWAIPAAS 140
G +LW D+ AIP S
Sbjct: 267 GGALWFDMLAIPKDS 281
>gi|445253380|ref|ZP_21409092.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily, partial [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
gi|444889426|gb|ELY12869.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily, partial [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
Length = 340
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 155 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N++ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|15602126|ref|NP_245198.1| protein PotD [Pasteurella multocida subsp. multocida str. Pm70]
gi|12720490|gb|AAK02345.1| PotD [Pasteurella multocida subsp. multocida str. Pm70]
Length = 358
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 101/230 (43%), Gaps = 33/230 (14%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IA+ ++ N W DLW+PE G++ +++ REV L +G N+ +
Sbjct: 146 IAFNTDSYKGENFTA---WGDLWKPEFKGKVQLLDDAREVFNIALLKLGQDPNTTD---- 198
Query: 63 VAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVV 122
A K + ++ L L N F+S + +F G+V V W+ V A K + + +V
Sbjct: 199 PAIIKQAYEELLKLRPNVLS-FNSDNPANSFISGEVEVGQLWNGSVRIAKKEQAPLNMVF 257
Query: 123 PKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEV-IPG 181
PK G LW D AIPA S + P H+ I + L A +E+ P
Sbjct: 258 PKEGPVLWVDTLAIPANS-----------KNPDG-AHKLINYLLSAKVAAQLAEEIGYPT 305
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEA 231
++ ALE LP E+ +QD + P AEIL + + + +A
Sbjct: 306 SNLKALEL----LPSEV-----TQDPAV---YPTAEILQNSHWQDDVGDA 343
>gi|417356781|ref|ZP_12132254.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Give str.
S5-487]
gi|353595222|gb|EHC52527.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Give str.
S5-487]
Length = 332
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 156 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL 214
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N++ +PK
Sbjct: 215 ---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPK 271
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 272 EGAMAFFDVFAMPADAK 288
>gi|355640046|ref|ZP_09051536.1| hypothetical protein HMPREF1030_00622 [Pseudomonas sp. 2_1_26]
gi|354831566|gb|EHF15578.1| hypothetical protein HMPREF1030_00622 [Pseudomonas sp. 2_1_26]
Length = 353
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 31/196 (15%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRISMVNSPREVIGSVLKYMGASYNSN 57
++ Y K++ K + P DW ++ P ++ GR+++++ P+E+ G+ LKY+G S +N
Sbjct: 128 LVGYNKTELDKLGIDPA-DWSVIFDPAVLEKIKGRVTVMDDPQELFGAALKYLGHS--AN 184
Query: 58 NIDLQVAGGKISVQQNLALLANQA-RLFDSTHYLKAFGIGDVWVAVGWSSDVL------P 110
+ D Q Q L L A F+S+ Y+K +G++WVA G+SSD+
Sbjct: 185 DTDPQ----HWKEAQALILAAKPYWAAFNSSSYIKELTLGNIWVAHGYSSDMYQARADAE 240
Query: 111 AVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTAR 170
A R V +P+ GA L D I S + P L +++I+F L
Sbjct: 241 AAGRAFKVDFALPRQGAVLAIDNMVIHKGS-----------KNPD-LAYRFIDFMLDGRN 288
Query: 171 ALPFKQEVIPGASPSA 186
A ++ G +P+A
Sbjct: 289 ASELTNQIGTG-TPNA 303
>gi|417413311|ref|ZP_12158325.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Mississippi
str. A4-633]
gi|353625997|gb|EHC74643.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Mississippi
str. A4-633]
Length = 348
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 156 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL 214
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N++ +PK
Sbjct: 215 ---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPK 271
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 272 EGAMAFFDVFAMPADAK 288
>gi|417364520|ref|ZP_12137419.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
gi|353596944|gb|EHC53803.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
Length = 347
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 156 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL 214
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N++ +PK
Sbjct: 215 ---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPK 271
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 272 EGAMAFFDVFAMPADAK 288
>gi|116051607|ref|YP_789554.1| polyamine ABC transporter [Pseudomonas aeruginosa UCBPP-PA14]
gi|421173152|ref|ZP_15630906.1| polyamine transport protein PotD [Pseudomonas aeruginosa CI27]
gi|115586828|gb|ABJ12843.1| polyamine ABC transporter protein [Pseudomonas aeruginosa
UCBPP-PA14]
gi|404536453|gb|EKA46093.1| polyamine transport protein PotD [Pseudomonas aeruginosa CI27]
Length = 354
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 31/196 (15%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRISMVNSPREVIGSVLKYMGASYNSN 57
++ Y K++ K + P DW ++ P ++ GR+++++ P+E+ G+ LKY+G S +N
Sbjct: 129 LVGYNKTELDKLGIDPA-DWSVIFDPAVLEKIKGRVTVMDDPQELFGAALKYLGHS--AN 185
Query: 58 NIDLQVAGGKISVQQNLALLANQA-RLFDSTHYLKAFGIGDVWVAVGWSSDVL------P 110
+ D Q Q L L A F+S+ Y+K +G++WVA G+SSD+
Sbjct: 186 DTDPQ----HWKEAQALILAAKPYWAAFNSSSYIKELTLGNIWVAHGYSSDMYQARADAE 241
Query: 111 AVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTAR 170
A R V +P+ GA L D I S + P L +++I+F L
Sbjct: 242 AAGRAFKVDFALPRQGAVLAIDNMVIHKGS-----------KNPD-LAYRFIDFMLDGRN 289
Query: 171 ALPFKQEVIPGASPSA 186
A ++ G +P+A
Sbjct: 290 ASELTNQIGTG-TPNA 304
>gi|445381416|ref|ZP_21427083.1| spermidine/putrescine-binding protein [Streptococcus thermophilus
MTCC 5460]
gi|445394349|ref|ZP_21428817.1| spermidine/putrescine-binding protein [Streptococcus thermophilus
MTCC 5461]
gi|444748944|gb|ELW73887.1| spermidine/putrescine-binding protein [Streptococcus thermophilus
MTCC 5461]
gi|444749052|gb|ELW73987.1| spermidine/putrescine-binding protein [Streptococcus thermophilus
MTCC 5460]
Length = 355
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 31/196 (15%)
Query: 19 EDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKI-SVQQNL-A 75
+ W DLW PE +I MV+ REVIG L +G S N+ N+ +L++A K+ S+ N+ A
Sbjct: 154 QHWNDLWSPEYRNQIMMVDGAREVIGFSLNSLGYSLNTKNMTELRLAETKLNSLTPNIKA 213
Query: 76 LLANQARLFDSTHYLKAFGI-GDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 134
++ ++ +K + I GD + V +S + + + ++ VVP G++LW D
Sbjct: 214 IVGDE---------MKGYMIQGDAAIGVTFSGEASEMLDKNKDLRYVVPSEGSNLWFDNL 264
Query: 135 AIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKL 194
IP + E + + +I F L+ A E I A+P+ TL L
Sbjct: 265 VIPKTVKHEKEA------------YAFINFMLKPENAAQ-NAEYIGYATPNEAAKTL--L 309
Query: 195 PEELLKGK---PSQDT 207
P+ + K PS+ T
Sbjct: 310 PKSITNDKAFYPSEST 325
>gi|437931523|ref|ZP_20851151.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 6.0562-1]
gi|435311553|gb|ELO85677.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Enteritidis str. 6.0562-1]
Length = 237
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 22 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL 80
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N++ +PK
Sbjct: 81 ---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPK 137
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 138 EGAMAFFDVFAMPADAK 154
>gi|421166158|ref|ZP_15624426.1| polyamine transport protein PotD [Pseudomonas aeruginosa ATCC
700888]
gi|404539135|gb|EKA48640.1| polyamine transport protein PotD [Pseudomonas aeruginosa ATCC
700888]
Length = 354
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 31/196 (15%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRISMVNSPREVIGSVLKYMGASYNSN 57
++ Y K++ K + P DW ++ P ++ GR+++++ P+E+ G+ LKY+G S +N
Sbjct: 129 LVGYNKTELDKLGIDPA-DWSVIFDPAVLEKIKGRVTVMDDPQELFGAALKYLGHS--AN 185
Query: 58 NIDLQVAGGKISVQQNLALLANQA-RLFDSTHYLKAFGIGDVWVAVGWSSDVL------P 110
+ D Q Q L L A F+S+ Y+K +G++WVA G+SSD+
Sbjct: 186 DTDPQ----HWKEAQALILAAKPYWAAFNSSSYIKELTLGNIWVAHGYSSDMYQARADAE 241
Query: 111 AVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTAR 170
A R V +P+ GA L D I S + P L +++I+F L
Sbjct: 242 AAGRAFKVDFALPRQGAVLAIDNMVIHKGS-----------KNPD-LAYRFIDFMLDGRN 289
Query: 171 ALPFKQEVIPGASPSA 186
A ++ G +P+A
Sbjct: 290 ASELTNQIGTG-TPNA 304
>gi|375262549|ref|YP_005024779.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio sp. EJY3]
gi|369842977|gb|AEX23805.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio sp. EJY3]
Length = 344
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 97/237 (40%), Gaps = 36/237 (15%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
I+Y +S + P+ W DLW ++ +++ R+V G LK G S NS N + +
Sbjct: 133 ISYNESMVEQ----PVTKWADLWDAHYEQQVMLIDDIRDVFGMALKMNGHSVNSKN-EAE 187
Query: 63 VAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVV 122
+ ++L L N L++S + G+ V + W+ + M + V+
Sbjct: 188 IK----QAYESLVALKNNVLLYNSDAPQVPYVSGETSVGMQWNGNAYQGQVEMPELKFVM 243
Query: 123 PKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGA 182
P GA LW D + IP+ S + L H++I F Q P Q I +
Sbjct: 244 PAEGAVLWMDNFTIPSGSENKV------------LAHKFINFMYQ-----PQNQAEIVNS 286
Query: 183 SPSALETTLVK--LPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
A T + LP+EL N P + L + EF+ + TL+ YE
Sbjct: 287 LGYASATNAGRNLLPDEL--------KNNATIFPAEDDLEKGEFINDVGAETLAIYE 335
>gi|261493836|ref|ZP_05990350.1| Lpp38 [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|452745507|ref|ZP_21945341.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Mannheimia haemolytica serotype 6 str. H23]
gi|1142681|gb|AAA84748.1| Lpp38 [Mannheimia haemolytica]
gi|261310539|gb|EEY11728.1| Lpp38 [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|452086382|gb|EME02771.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Mannheimia haemolytica serotype 6 str. H23]
Length = 364
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 31/229 (13%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IA+ + ++ W DLW+PE AG++ +++ REV L +G + N+ N D +
Sbjct: 152 IAFNTADYKGETFT---SWGDLWKPEFAGKVQLLDDAREVFNIALLKLGKNPNTTNPD-E 207
Query: 63 VAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVV 122
+ + L L F S + +F G+V V W+ V A K + V +V
Sbjct: 208 IK----EAFEELKKLRPNVLSFTSDNPANSFIAGEVSVGQLWNGSVRIAKKENAPVDMVF 263
Query: 123 PKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGA 182
PK G LW D AIPA ++ + H+ I + L A ++ +
Sbjct: 264 PKEGPVLWVDTLAIPANAKNKEN------------AHKLINYLLSAKVA---EKLTLAIG 308
Query: 183 SPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEA 231
P++ L LP+E+ ++DT + P AE+L + ++ + + +A
Sbjct: 309 YPTSNVEALKVLPKEI-----TEDTAIY---PSAEVLQKSQWQDDVGDA 349
>gi|417209667|ref|ZP_12020951.1| putrescine-binding periplasmic protein [Escherichia coli JB1-95]
gi|419202092|ref|ZP_13745314.1| potF [Escherichia coli DEC8B]
gi|378055736|gb|EHW17997.1| potF [Escherichia coli DEC8B]
gi|386196292|gb|EIH90518.1| putrescine-binding periplasmic protein [Escherichia coli JB1-95]
Length = 370
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P E +VL Y+G NS D G +
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEGFATVLNYLGKDPNSTKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|283784617|ref|YP_003364482.1| putrescine ABC transporter substrate-binding protein [Citrobacter
rodentium ICC168]
gi|282948071|emb|CBG87636.1| putrescine ABC transporter, substrate-binding protein [Citrobacter
rodentium ICC168]
Length = 370
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 17/138 (12%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P EV +VL Y+G NS + A
Sbjct: 155 APVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTD-----AKDYTGP 209
Query: 71 QQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVP 123
+L L L R F S+ Y+ GD VA+GW+ DV A R N++ +P
Sbjct: 210 ATDLLLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGINISFSIP 269
Query: 124 KSGASLWADLWAIPAASR 141
K GA + D++A+PA ++
Sbjct: 270 KEGAMAFFDVFAMPADAK 287
>gi|262403152|ref|ZP_06079712.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio sp. RC586]
gi|262350651|gb|EEY99784.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio sp. RC586]
Length = 344
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 95/221 (42%), Gaps = 30/221 (13%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALL 77
I W DLW + ++ +++ R+V G LK G S N+ N D ++ ++L L
Sbjct: 144 ITKWADLWDKQYEQQVMLIDDIRDVFGMALKLNGFSINTKNED-EIK----KAYESLVAL 198
Query: 78 ANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 137
N L++S + G+ + + W+ + M + V+P+ GA LW D + IP
Sbjct: 199 KNNVLLYNSDAPHVPYVSGEATLGMQWNGNAYQGQVEMPELKFVMPEEGAVLWMDNFTIP 258
Query: 138 AASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG-ASPSALETTLVKLPE 196
+ S K I PL H++I F Q + E++ SA + LP
Sbjct: 259 SGS----KNI--------PLAHKFINFMYQPEN----QAEIVKSLGYASATKGGRALLPA 302
Query: 197 ELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
EL +D I P E + + EF+ + TL+ YE
Sbjct: 303 EL------RDNPTI--FPSEEDMKKGEFINDVGPETLAIYE 335
>gi|417332548|ref|ZP_12116395.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Alachua
str. R6-377]
gi|353581346|gb|EHC42310.1| Putrescine ABC transporter putrescine-binding protein PotF, partial
[Salmonella enterica subsp. enterica serovar Alachua
str. R6-377]
Length = 328
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 156 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL 214
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N++ +PK
Sbjct: 215 ---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPK 271
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 272 EGAMAFFDVFAMPADAK 288
>gi|378774664|ref|YP_005176907.1| spermidine/putrescine-binding periplasmic protein PotD1
[Pasteurella multocida 36950]
gi|386834628|ref|YP_006239945.1| bacterial extracellular solute-binding protein, putative
[Pasteurella multocida subsp. multocida str. 3480]
gi|417854587|ref|ZP_12499874.1| PotD [Pasteurella multocida subsp. multocida str. Anand1_goat]
gi|421262976|ref|ZP_15714061.1| PotD [Pasteurella multocida subsp. multocida str. P52VAC]
gi|425062948|ref|ZP_18466073.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Pasteurella multocida subsp. gallicida X73]
gi|425065036|ref|ZP_18468156.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Pasteurella multocida subsp. gallicida P1059]
gi|338217662|gb|EGP03508.1| PotD [Pasteurella multocida subsp. multocida str. Anand1_goat]
gi|356597212|gb|AET15938.1| spermidine/putrescine-binding periplasmic protein PotD1
[Pasteurella multocida 36950]
gi|385201331|gb|AFI46186.1| bacterial extracellular solute-binding protein, putative
[Pasteurella multocida subsp. multocida str. 3480]
gi|401690389|gb|EJS85670.1| PotD [Pasteurella multocida subsp. multocida str. P52VAC]
gi|404383654|gb|EJZ80105.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Pasteurella multocida subsp. gallicida X73]
gi|404384490|gb|EJZ80924.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Pasteurella multocida subsp. gallicida P1059]
Length = 348
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 101/230 (43%), Gaps = 33/230 (14%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IA+ ++ N W DLW+PE G++ +++ REV L +G N+ +
Sbjct: 136 IAFNTDSYKGENFTA---WGDLWKPEFKGKVQLLDDAREVFNIALLKLGQDPNTTD---- 188
Query: 63 VAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVV 122
A K + ++ L L N F+S + +F G+V V W+ V A K + + +V
Sbjct: 189 PAIIKQAYEELLKLRPNVLS-FNSDNPANSFISGEVEVGQLWNGSVRIAKKEQAPLNMVF 247
Query: 123 PKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEV-IPG 181
PK G LW D AIPA S + P H+ I + L A +E+ P
Sbjct: 248 PKEGPVLWVDTLAIPANS-----------KNPDG-AHKLINYLLSAKVAAQLAEEIGYPT 295
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEA 231
++ ALE LP E+ +QD + P AEIL + + + +A
Sbjct: 296 SNLKALEL----LPSEV-----TQDPAV---YPTAEILQNSHWQDDVGDA 333
>gi|317047520|ref|YP_004115168.1| family 1 extracellular solute-binding protein [Pantoea sp. At-9b]
gi|316949137|gb|ADU68612.1| extracellular solute-binding protein family 1 [Pantoea sp. At-9b]
Length = 369
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 31/165 (18%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKIS 69
AP++ W + +PE + +S +++P E+ +VL Y+G NS++ D A +
Sbjct: 154 APVDSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSDPKDYSGAATDL- 212
Query: 70 VQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVP 123
L L R F S+ Y+ G++ VA+GWS D+L A R + N+A VP
Sbjct: 213 ----LLKLRPSIRYFHSSQYINDLANGNICVAIGWSGDILQAKDRAAQAKNGVNLAYSVP 268
Query: 124 KSGASLWADLWAIPA-ASRLETKQIGGRVRGPSPLIHQWIEFCLQ 167
K GA + D+ AIP A L+ +QW+ F +
Sbjct: 269 KQGALAFFDMMAIPKDAKNLDEA-------------YQWLNFIMD 300
>gi|386057442|ref|YP_005973964.1| polyamine transport protein PotD [Pseudomonas aeruginosa M18]
gi|347303748|gb|AEO73862.1| polyamine transport protein PotD [Pseudomonas aeruginosa M18]
Length = 353
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 31/196 (15%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRP----ELAGRISMVNSPREVIGSVLKYMGASYNSN 57
++ Y K++ K + P DW ++ P ++ GR+++++ P+E+ G+ LKY+G S +N
Sbjct: 128 LVGYNKTELDKLGIDPA-DWSVIFDPAVLEKIKGRVTVMDDPQELFGAALKYLGHS--AN 184
Query: 58 NIDLQVAGGKISVQQNLALLANQA-RLFDSTHYLKAFGIGDVWVAVGWSSDVLPA----- 111
+ D Q Q L L A F+S+ Y+K +G++WVA G+SSD+ A
Sbjct: 185 DTDPQ----HWKEAQALILAAKPYWAAFNSSSYIKELTLGNIWVAHGYSSDMYQARADAE 240
Query: 112 -VKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTAR 170
R V +P+ GA L D I S + P L +++I+F L
Sbjct: 241 SAGRAFKVDFALPRQGAVLAIDNMVIHKGS-----------KNPD-LAYRFIDFMLDGRN 288
Query: 171 ALPFKQEVIPGASPSA 186
A ++ G +P+A
Sbjct: 289 ASELTNQIGTG-TPNA 303
>gi|300813078|ref|ZP_07093456.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|313123351|ref|YP_004033610.1| spermidine/putrescine ABC transporter, substratebinding protein
[Lactobacillus delbrueckii subsp. bulgaricus ND02]
gi|422845339|ref|ZP_16892049.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus delbrueckii
subsp. lactis DSM 20072]
gi|300495919|gb|EFK31063.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|312279914|gb|ADQ60633.1| Spermidine/putrescine ABC transporter, substratebinding protein
[Lactobacillus delbrueckii subsp. bulgaricus ND02]
gi|325684511|gb|EGD26675.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Lactobacillus delbrueckii
subsp. lactis DSM 20072]
Length = 360
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 106/235 (45%), Gaps = 34/235 (14%)
Query: 16 APIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN-SNNIDLQVAGGKIS-VQQN 73
I+ W DLW+ + G+I +V+S R+++G L MG S N +N+ L+VA K+ + +N
Sbjct: 155 GEIKSWNDLWKKKYQGQILLVDSARDIMGMSLVSMGYSMNDTNSAHLKVAKAKLDKIGKN 214
Query: 74 L-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWAD 132
+ A++A++ +++ + + W+ V +S + + + S++ VVP G++LW D
Sbjct: 215 VKAIVADELKMYMVQN--------EAWIGVTYSGEAATMMDQDSHIHYVVPAQGSNLWFD 266
Query: 133 LWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLV 192
IP + +++I F L+ A E I ++P+ L
Sbjct: 267 NIVIPKTCK------------NKEAAYKFINFMLEPKNAAQ-NAEYIGYSTPNTAAQKL- 312
Query: 193 KLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVADLQKPA 247
LP+ + + K PP + E L + + +Y L + + A
Sbjct: 313 -LPKSVREDKQF--------YPPMSTVKNLEVYRDLPSSKVQEYNDLFLEFKMYA 358
>gi|365926131|ref|ZP_09448894.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
mali KCTC 3596 = DSM 20444]
gi|420267015|ref|ZP_14769433.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
mali KCTC 3596 = DSM 20444]
gi|394424140|gb|EJE97319.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
mali KCTC 3596 = DSM 20444]
Length = 356
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 102/227 (44%), Gaps = 34/227 (14%)
Query: 16 APIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKI-SVQQN 73
+ ++ W DLW P I +++ REV+G L G S N N+ DLQ A K+ + N
Sbjct: 154 SEVKHWDDLWNPRFKNSIMLIDGAREVMGLTLNSQGKSVNDTNVKDLQAAYEKLKKLSPN 213
Query: 74 L-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWAD 132
+ A+LA++ +++ + +AV +S + + + ++ ++P+ G+++W D
Sbjct: 214 VKAILADEIKVY--------MAQDEAPLAVSYSGEAMEMMDNNKHLHYIIPEEGSNIWFD 265
Query: 133 LWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLV 192
IP ++ ++G + ++ F L+ A E + A+P+ +
Sbjct: 266 NMVIPRTAK--------NIKGA----YAFLNFMLEPKNAAQ-NAEYVAYATPNKAAKKM- 311
Query: 193 KLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
LP+ + K V P + ++ E + LS+ LS Y L
Sbjct: 312 -LPKSMQDDK--------VMYPTNKTISHLEVYDALSQKNLSKYNDL 349
>gi|322515385|ref|ZP_08068379.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Actinobacillus ureae ATCC
25976]
gi|322118612|gb|EFX90840.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Actinobacillus ureae ATCC
25976]
Length = 349
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 77/184 (41%), Gaps = 31/184 (16%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNS-NNIDLQVAGGKISVQQNLAL 76
I W DLWR E G++ M+N PREV L G S NS N ++Q S Q L
Sbjct: 149 ISSWGDLWRDEYKGKLLMMNDPREVFHIALLLDGKSPNSENEQEIQ------SAYQRLQK 202
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
L +F+S + G+V V + WS A ++ V PK GA +W D + I
Sbjct: 203 LVPNVLVFNSDSPEMPYLQGEVSVGMQWSGSAHRAKSENPDLKFVFPKEGAVIWMDNYVI 262
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPE 196
P G V + H++I+F L P ++ +ET +P
Sbjct: 263 PK----------GAVNKEA--AHKFIDFLLH------------PESAKEVIETMGFSMPN 298
Query: 197 ELLK 200
E +K
Sbjct: 299 EGVK 302
>gi|407693810|ref|YP_006818599.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Actinobacillus suis H91-0380]
gi|407389867|gb|AFU20360.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Actinobacillus suis H91-0380]
Length = 349
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 78/184 (42%), Gaps = 31/184 (16%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNS-NNIDLQVAGGKISVQQNLAL 76
I W DLWR E G++ M+N PREV L G S NS N ++Q S Q L
Sbjct: 149 ISSWGDLWRDEYKGKLLMMNDPREVFHIALLLDGKSPNSENEQEIQ------SAYQRLQK 202
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
L +F+S + G+V V + WS A ++ V PK GA +W D + I
Sbjct: 203 LVPNVLVFNSDSPEMPYLQGEVSVGMQWSGSAHRAKSENPDLKFVFPKEGAVIWMDNYVI 262
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPE 196
P G V + H++I+F L+ P ++ +ET +P
Sbjct: 263 PK----------GAVNKEA--AHKFIDFLLR------------PESAKEVIETMGFSMPN 298
Query: 197 ELLK 200
E +K
Sbjct: 299 EGVK 302
>gi|409396642|ref|ZP_11247622.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas sp. Chol1]
gi|409118824|gb|EKM95215.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas sp. Chol1]
Length = 361
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 18/133 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W L+ P+ A + I+M++S E+I ++L Y+G NS N D + A +
Sbjct: 149 IDSWAVLFEPQNAEKLASCGIAMLDSADEMIPAMLNYLGLDPNSENPADYRKA------E 202
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKS 125
+ L + R F S+ Y+ G++ VA G+S DV A R +A +PK
Sbjct: 203 EKLLAVRPHVRYFHSSKYISDLANGNICVAAGFSGDVFQAAARAEEAGKGIEIAYAIPKE 262
Query: 126 GASLWADLWAIPA 138
G +LW D+ AIPA
Sbjct: 263 GGNLWFDMLAIPA 275
>gi|408416127|ref|YP_006626834.1| polyamine transport protein [Bordetella pertussis 18323]
gi|401778297|emb|CCJ63698.1| putative polyamine transport protein [Bordetella pertussis 18323]
Length = 367
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 22/134 (16%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
+ +W L++PE A + ISM++ +V +VLKY+G NS N D ++
Sbjct: 155 LANWDMLFKPENAAKLKECGISMLDEAAQVFPAVLKYLGKDPNSANTD--------DYKE 206
Query: 73 NLALLAN---QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR------MSNVAVVVP 123
LALL R F S+ Y+ +GD+ + G+S DV+ A +R + + +P
Sbjct: 207 ALALLKQIRPYIRQFSSSGYIDELAVGDLCMVYGFSGDVMIARRRAQEARKLYEINYFIP 266
Query: 124 KSGASLWADLWAIP 137
K GA W D+ AIP
Sbjct: 267 KGGAPAWFDVMAIP 280
>gi|384919869|ref|ZP_10019899.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Citreicella sp. 357]
gi|384466255|gb|EIE50770.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Citreicella sp. 357]
Length = 361
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 30/164 (18%)
Query: 16 APIEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W +++PE +++ +++P E+I + L Y+G +S++ D+ + +
Sbjct: 147 APVTSWDLVFKPENMEKLADCGVMFLDAPAEMIPAALNYIGEDPDSHDPDVIAKAEAVYM 206
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
+ + + F+S+ Y+ A GD+ VAVGWS DVL A R + +A P
Sbjct: 207 P-----IRDHIQKFNSSEYVNALANGDICVAVGWSGDVLQARDRAAEAGNGVEIAYYAPD 261
Query: 125 SGASLWADLWAIPAASRLETKQIGGRVRGPSP-LIHQWIEFCLQ 167
GA +W D AIP V P+P H+++ F +
Sbjct: 262 EGAQMWFDEMAIP-------------VDAPNPEAAHRFLNFIMD 292
>gi|333900395|ref|YP_004474268.1| extracellular solute-binding protein [Pseudomonas fulva 12-X]
gi|333115660|gb|AEF22174.1| extracellular solute-binding protein family 1 [Pseudomonas fulva
12-X]
Length = 361
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 18/152 (11%)
Query: 3 IAYKKSKFRK--HNLAPIEDWKDLWRP----ELAG-RISMVNSPREVIGSVLKYMGASYN 55
+ Y K R AP++ W+ ++ +L G ++ +++P ++I L Y+G N
Sbjct: 132 VGYNAEKVRAALGEGAPVDSWELVFNAGNLAKLKGCGVAFLDAPVKIIPQALHYLGMDPN 191
Query: 56 SNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM 115
S++ D + L LA F S+ Y+ GD+ VAVG+S DV+ A R
Sbjct: 192 SHDPDDYTKASAL-----LQKLAPSVTYFHSSRYISDLANGDICVAVGYSGDVMQAQSRA 246
Query: 116 S------NVAVVVPKSGASLWADLWAIPAASR 141
++ V+PK GA+LW D+ AIP +R
Sbjct: 247 KDAGKSVDIRYVIPKEGANLWFDMLAIPCDAR 278
>gi|226314011|ref|YP_002773907.1| spermidine/putrescine ABC transporter substrate-binding protein
[Brevibacillus brevis NBRC 100599]
gi|226096961|dbj|BAH45403.1| spermidine/putrescine ABC transporter substrate binding protein
[Brevibacillus brevis NBRC 100599]
Length = 351
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 15/142 (10%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K ++ + W DLW GR+ M+N PREV+G L G S ++ N
Sbjct: 140 IAYNKKYVKETPTS----WNDLWNEAYKGRVIMLNDPREVMGMALIKNGFSNSTTN---- 191
Query: 63 VAGGKISVQQNLALLAN---QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVA 119
K ++++ A L FD+ + + + W+ WS D + +V
Sbjct: 192 ----KEELEKSFADLKKVVPNVVAFDTDNIKQKMIAEEAWIGTVWSGDAAFIHAQNPDVE 247
Query: 120 VVVPKSGASLWADLWAIPAASR 141
V+PK GA++WAD AIP ++
Sbjct: 248 YVIPKEGATIWADTMAIPKGAK 269
>gi|118443532|ref|YP_877312.1| extracellular solute-binding protein [Clostridium novyi NT]
gi|118133988|gb|ABK61032.1| Bacterial extracellular solute-binding protein, putative
[Clostridium novyi NT]
Length = 347
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 64/125 (51%), Gaps = 7/125 (5%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLAL 76
I+ W LW P+ G+I MV+S R+ I LK +G S N+ N +L+ A ++ Q+ L
Sbjct: 148 IDSWDALWNPKYKGQILMVDSQRDAIAVALKKLGYSMNTTNKAELEKAKQELIKQKPLV- 206
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
A + D L G +AV WS D + +K N+ V+PK G++LW D I
Sbjct: 207 ---HAYVGDEVKDLMTDEEGA--IAVVWSGDAVTMMKNNKNLRYVIPKEGSNLWFDNMVI 261
Query: 137 PAASR 141
P S+
Sbjct: 262 PKGSK 266
>gi|417852729|ref|ZP_12498230.1| PotD [Pasteurella multocida subsp. gallicida str. Anand1_poultry]
gi|338216364|gb|EGP02484.1| PotD [Pasteurella multocida subsp. gallicida str. Anand1_poultry]
Length = 348
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 101/230 (43%), Gaps = 33/230 (14%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IA+ ++ N W DLW+PE G++ +++ REV L +G N+ +
Sbjct: 136 IAFNTDSYKGENFTA---WGDLWKPEFKGKVQLLDDAREVFNIALLKLGQDPNTTD---- 188
Query: 63 VAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVV 122
A K + ++ L L N F+S + +F G+V V W+ V A K + + +V
Sbjct: 189 PAIIKQAYEELLKLRPNILS-FNSDNPANSFISGEVEVGQLWNGSVRIAKKEQAPLNMVF 247
Query: 123 PKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEV-IPG 181
PK G LW D AIPA S + P H+ I + L A +E+ P
Sbjct: 248 PKEGPVLWVDTLAIPANS-----------KNPDG-AHKLINYLLSAKVAAQLAEEIGYPT 295
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEA 231
++ ALE LP E+ +QD + P AEIL + + + +A
Sbjct: 296 SNLKALEL----LPSEV-----TQDPAV---YPTAEILQNSHWQDDVGDA 333
>gi|398840193|ref|ZP_10597431.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM102]
gi|398111211|gb|EJM01101.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM102]
Length = 362
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 63/133 (47%), Gaps = 18/133 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W + P+ + +SM++S EV +VL YMG S N D + A K
Sbjct: 150 IDSWAVFFEPQNLKKLSQCGVSMMDSADEVFPAVLNYMGMDPRSENPEDFKKAEAK---- 205
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
L + F S+ Y+ GD+ VA G+S DV A R N+A +PK
Sbjct: 206 --LMTIRPYITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYSIPKE 263
Query: 126 GASLWADLWAIPA 138
G++LW DL AIPA
Sbjct: 264 GSNLWFDLLAIPA 276
>gi|149911832|ref|ZP_01900434.1| spermidine/putrescine ABC transporter,
periplasmicspermidine/putrescine-binding protein
[Moritella sp. PE36]
gi|149805085|gb|EDM65109.1| spermidine/putrescine ABC transporter,
periplasmicspermidine/putrescine-binding protein
[Moritella sp. PE36]
Length = 344
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 91/219 (41%), Gaps = 28/219 (12%)
Query: 15 LAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNL 74
L I W DLW P+ G++ + + RE+ LK G S N+ N + ++ L
Sbjct: 140 LTSITSWTDLWDPKWEGQLLLTDDAREIFHMALKIQGHSANTQNEEELAQAYEL-----L 194
Query: 75 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 134
L +F+S + G+V + + W+ A + S++ +V PK GA W D
Sbjct: 195 KKLMPNVLVFNSDTPANPYIAGEVELGMIWNGSTYMAQQEDSDITMVYPKEGAVFWMDSL 254
Query: 135 AIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKL 194
AIP + K + +H+ I+F L+ A E+ P+ + L
Sbjct: 255 AIPKNA----KNVDA--------VHKLIDFLLRPEVAAEVALEI---GYPTPNKAAKKLL 299
Query: 195 PEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATL 233
P+E + K + P AE +A EF + EA +
Sbjct: 300 PKEFTENK--------IVFPDAETIANGEFHSDVGEANI 330
>gi|70730318|ref|YP_260057.1| periplasmic putrescine-binding protein [Pseudomonas protegens Pf-5]
gi|68344617|gb|AAY92223.1| periplasmic putrescine-binding protein [Pseudomonas protegens Pf-5]
Length = 362
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 78/175 (44%), Gaps = 29/175 (16%)
Query: 33 ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLK 91
+SM++SP EV +VL Y+G S N D + A K L L F S+ Y+
Sbjct: 170 VSMMDSPDEVFPAVLNYLGLDPRSENPEDYKKAEAK------LLTLRPYITYFHSSKYVS 223
Query: 92 AFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASRLETK 145
GD+ +A G+S DV A R N+A +PK G++LW DL AIPA +
Sbjct: 224 DLANGDICIAFGYSGDVFQAANRAREAKNGVNIAYSIPKEGSNLWFDLLAIPADA----- 278
Query: 146 QIGGRVRGPSPLIHQWIEFCLQ---TARALPFKQEVIPG-ASPSALETTLVKLPE 196
G V+ H +I + L A+ + P AS +E LV PE
Sbjct: 279 ---GNVKE----AHAFINYLLDPQVIAKVSAYVGYANPNPASQQYMEADLVNNPE 326
>gi|359781793|ref|ZP_09285016.1| extracellular solute-binding protein [Pseudomonas psychrotolerans
L19]
gi|359370163|gb|EHK70731.1| extracellular solute-binding protein [Pseudomonas psychrotolerans
L19]
Length = 362
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 16/135 (11%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
++ W L+ PE + +S ++SP EV +VL+Y+G NS N D +
Sbjct: 150 LDSWAILFEPENLKKLSKCGVSFMDSPDEVYPAVLQYLGLDPNSTNPD-----DYKKAEA 204
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPA------VKRMSNVAVVVPKSG 126
L + F S+ Y+ G++ VA G+S DV A K+ N+ +PK G
Sbjct: 205 QLLKVRPYITYFHSSKYISDLANGNICVAFGYSGDVFQARSRAEEAKKGVNIGYAIPKEG 264
Query: 127 ASLWADLWAIPAASR 141
A+LW DL AIP ++
Sbjct: 265 ANLWFDLLAIPKDAK 279
>gi|319787664|ref|YP_004147139.1| family 1 extracellular solute-binding protein [Pseudoxanthomonas
suwonensis 11-1]
gi|317466176|gb|ADV27908.1| extracellular solute-binding protein family 1 [Pseudoxanthomonas
suwonensis 11-1]
Length = 375
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 16/132 (12%)
Query: 21 WKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLA 75
W L++PE R++ ++++P E I + L Y+G NS + ++ G + LA
Sbjct: 166 WDLLFKPENVSRLAHCGVMILDTPTEAIPAALNYLGEDPNSTDPEVIRKGAAL-----LA 220
Query: 76 LLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGASL 129
+ R F S+ Y+ A G + +GWS DVL A R VA +PK GA L
Sbjct: 221 KIRPHIRSFHSSQYIDALANGSACLVMGWSGDVLQARDRADEAGNGVKVAYSIPKEGAPL 280
Query: 130 WADLWAIPAASR 141
+ D+ AIP +R
Sbjct: 281 FVDMLAIPKDAR 292
>gi|16802852|ref|NP_464337.1| hypothetical protein lmo0810 [Listeria monocytogenes EGD-e]
gi|46907040|ref|YP_013429.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes serotype 4b str. F2365]
gi|47094815|ref|ZP_00232429.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes str. 1/2a F6854]
gi|226223427|ref|YP_002757534.1| spermidine/putrescine-binding protein [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|254823923|ref|ZP_05228924.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
J1-194]
gi|254828893|ref|ZP_05233580.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
N3-165]
gi|254853773|ref|ZP_05243121.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
R2-503]
gi|254911493|ref|ZP_05261505.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
J2818]
gi|254931190|ref|ZP_05264549.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
HPB2262]
gi|254935819|ref|ZP_05267516.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
F6900]
gi|284801140|ref|YP_003413005.1| hypothetical protein LM5578_0889 [Listeria monocytogenes 08-5578]
gi|284994282|ref|YP_003416050.1| hypothetical protein LM5923_0844 [Listeria monocytogenes 08-5923]
gi|300765116|ref|ZP_07075103.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes FSL N1-017]
gi|386043137|ref|YP_005961942.1| spermidine/putrescine transport system substrate-binding protein
[Listeria monocytogenes 10403S]
gi|386046472|ref|YP_005964804.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
J0161]
gi|386049737|ref|YP_005967728.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
R2-561]
gi|386053073|ref|YP_005970631.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
Finland 1998]
gi|386731563|ref|YP_006205059.1| extracellular solute-binding protein [Listeria monocytogenes
07PF0776]
gi|404280362|ref|YP_006681260.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC2755]
gi|404283250|ref|YP_006684147.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC2372]
gi|404286220|ref|YP_006692806.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes serotype 7 str. SLCC2482]
gi|404410049|ref|YP_006695637.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC5850]
gi|404412893|ref|YP_006698480.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC7179]
gi|405749162|ref|YP_006672628.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes ATCC 19117]
gi|405752027|ref|YP_006675492.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC2378]
gi|405754888|ref|YP_006678352.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC2540]
gi|405757805|ref|YP_006687081.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC2479]
gi|406703584|ref|YP_006753938.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes L312]
gi|417317055|ref|ZP_12103681.1| extracellular solute-binding protein family 1 [Listeria
monocytogenes J1-220]
gi|424713687|ref|YP_007014402.1| Spermidine/putrescine-binding periplasmic protein 2 [Listeria
monocytogenes serotype 4b str. LL195]
gi|424822534|ref|ZP_18247547.1| periplasmic protein (SPBP) [Listeria monocytogenes str. Scott A]
gi|16410199|emb|CAC98888.1| lmo0810 [Listeria monocytogenes EGD-e]
gi|46880306|gb|AAT03606.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes serotype 4b str. F2365]
gi|47016697|gb|EAL07616.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes str. 1/2a F6854]
gi|225875889|emb|CAS04593.1| Putative spermidine/putrescine-binding protein [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|258601306|gb|EEW14631.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
N3-165]
gi|258607153|gb|EEW19761.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
R2-503]
gi|258608406|gb|EEW21014.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
F6900]
gi|284056702|gb|ADB67643.1| hypothetical protein LM5578_0889 [Listeria monocytogenes 08-5578]
gi|284059749|gb|ADB70688.1| hypothetical protein LM5923_0844 [Listeria monocytogenes 08-5923]
gi|293582738|gb|EFF94770.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
HPB2262]
gi|293589436|gb|EFF97770.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
J2818]
gi|293593149|gb|EFG00910.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
J1-194]
gi|300514241|gb|EFK41301.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes FSL N1-017]
gi|328475514|gb|EGF46273.1| extracellular solute-binding protein family 1 [Listeria
monocytogenes J1-220]
gi|332311214|gb|EGJ24309.1| periplasmic protein (SPBP) [Listeria monocytogenes str. Scott A]
gi|345533463|gb|AEO02904.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
J0161]
gi|345536371|gb|AEO05811.1| spermidine/putrescine transport system substrate-binding protein
[Listeria monocytogenes 10403S]
gi|346423583|gb|AEO25108.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
R2-561]
gi|346645724|gb|AEO38349.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
Finland 1998]
gi|384390321|gb|AFH79391.1| extracellular solute-binding protein family 1 [Listeria
monocytogenes 07PF0776]
gi|404218362|emb|CBY69726.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes ATCC 19117]
gi|404221227|emb|CBY72590.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC2378]
gi|404224088|emb|CBY75450.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC2540]
gi|404226997|emb|CBY48402.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC2755]
gi|404229875|emb|CBY51279.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC5850]
gi|404232752|emb|CBY54155.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC2372]
gi|404235687|emb|CBY57089.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC2479]
gi|404238592|emb|CBY59993.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC7179]
gi|404245149|emb|CBY03374.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes serotype 7 str. SLCC2482]
gi|406360614|emb|CBY66887.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes L312]
gi|424012871|emb|CCO63411.1| Spermidine/putrescine-binding periplasmic protein 2 [Listeria
monocytogenes serotype 4b str. LL195]
Length = 357
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 109/245 (44%), Gaps = 37/245 (15%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN-SNNIDL 61
I Y K F N + W L+ PEL +I +++ REV+G L +G S N +N L
Sbjct: 143 IIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLGYSLNDTNKAHL 199
Query: 62 QVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVA 119
Q A K+ ++ N+ A++ ++ +L + + + VAV +S + + ++
Sbjct: 200 QAARDKLETMTPNVKAIVGDEIKLLMADN--------EAGVAVTFSGEAAEMLSENEDLE 251
Query: 120 VVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVI 179
V+PK G++LW D IP + K + G H++I F L+ A E +
Sbjct: 252 YVIPKDGSNLWFDNMVIPKTA----KNVDGA--------HKFINFMLKPENA-AINAEYV 298
Query: 180 PGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
A+P+A L LP+E+ S D P + L E + L + LS Y L
Sbjct: 299 GYATPNAKAVEL--LPKEI-----SSDERF---YPDMDELNNLEVYDNLGKRMLSYYNEL 348
Query: 240 VADLQ 244
+ +
Sbjct: 349 FLEFK 353
>gi|84683820|ref|ZP_01011723.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Maritimibacter alkaliphilus HTCC2654]
gi|84668563|gb|EAQ15030.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Maritimibacter alkaliphilus HTCC2654]
Length = 361
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 30/164 (18%)
Query: 16 APIEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP + W ++ P +++ +++P E+I + L Y+G +S++ D+ V
Sbjct: 147 APTDSWALVFDPANMEKLAECGVHFLDAPAEMIPAALNYIGEDPDSHDPDVIA-----KV 201
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPK 124
++ + +A + F S+ Y++A GD+ VAVGWS D+L A R + + VVPK
Sbjct: 202 EEVYSGIAPYIQKFHSSEYIEALANGDICVAVGWSGDILQARDRAAEADNGNVIEYVVPK 261
Query: 125 SGASLWADLWAIPAASRLETKQIGGRVRGPSPL-IHQWIEFCLQ 167
GA +W D AIP V P+P H+++ F +
Sbjct: 262 EGAQMWFDQMAIP-------------VDAPNPEGAHKFLNFIMD 292
>gi|392531710|ref|ZP_10278847.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Carnobacterium maltaromaticum ATCC 35586]
Length = 357
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 106/230 (46%), Gaps = 34/230 (14%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKIS-VQQNL- 74
++ W DLW P+LA + +++ REVIG L +G S NS N+ L A K+S + N+
Sbjct: 155 MQHWDDLWNPKLANNVMLIDGAREVIGLSLNSLGYSLNSKNMQQLTAASDKLSTLTPNVK 214
Query: 75 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 134
A++A++ +++ + VAV +S + + ++ V+P G++LW D +
Sbjct: 215 AIVADEIKMYMVQE--------ESAVAVTFSGEASEMLDNNEHLHYVIPSEGSNLWFDNF 266
Query: 135 AIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKL 194
IP ++ K+ + +I F L+ A E I ++P+ + + L
Sbjct: 267 VIPKTAK--NKEAA----------YAFINFMLEPKNAAQ-NAEYIGYSTPN--KAAMAYL 311
Query: 195 PEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVADLQ 244
P+EL++ + P E ++ E E L L+ Y L + +
Sbjct: 312 PKELVEDEQF--------YPSDETMSHLEVYEDLGAKYLAIYNDLFLEFK 353
>gi|120603905|ref|YP_968305.1| extracellular solute-binding protein [Desulfovibrio vulgaris DP4]
gi|120564134|gb|ABM29878.1| extracellular solute-binding protein, family 1 [Desulfovibrio
vulgaris DP4]
Length = 345
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 16 APIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNL 74
A I W DL+RPE G + + + R+ G LK +G S NS + +++ A + L
Sbjct: 143 ATISSWNDLFRPEFKGGVILSDDLRDTFGIALKALGYSVNSTSEAEIKAA------YEWL 196
Query: 75 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 134
L R+FD T +AF +V + W+ D A+ ++A V PK G LW D
Sbjct: 197 LKLKPSVRVFDVTATKQAFIAEEVKGGMSWNGDAFIAMNENPDLAFVYPKEGLPLWVDSL 256
Query: 135 AIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQ 167
AIP IG + + H++I+F L+
Sbjct: 257 AIP---------IGAEHKDNA---HKFIDFLLR 277
>gi|421858504|ref|ZP_16290771.1| spermidine/putrescine-binding periplasmic protein [Paenibacillus
popilliae ATCC 14706]
gi|410831949|dbj|GAC41208.1| spermidine/putrescine-binding periplasmic protein [Paenibacillus
popilliae ATCC 14706]
Length = 347
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 11/140 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDL 61
IAY K + + AP W DLW E G++ +++ RE+IG LK G S +++N D+
Sbjct: 136 IAYNKKQIAE---APTS-WADLWNDEYKGKVLLLDDNREIIGVALKKAGKSNSTDNEADI 191
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
A +L L FD+ + + + W+ WS D +VA V
Sbjct: 192 NAAA------DDLRKLVPNVVAFDTDNIKQKMIQEEGWIGTVWSGDAAFIAAENPDVAYV 245
Query: 122 VPKSGASLWADLWAIPAASR 141
VP+ G++++AD +AIP ++
Sbjct: 246 VPQEGSTIFADTYAIPKGAK 265
>gi|227112035|ref|ZP_03825691.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
gi|253688079|ref|YP_003017269.1| family 1 extracellular solute-binding protein [Pectobacterium
carotovorum subsp. carotovorum PC1]
gi|251754657|gb|ACT12733.1| extracellular solute-binding protein family 1 [Pectobacterium
carotovorum subsp. carotovorum PC1]
Length = 369
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 17/138 (12%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P E+ +VL Y G NS G +
Sbjct: 154 APVDSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYQGKDPNSTK-----PGDYTTS 208
Query: 71 QQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVP 123
+L L L R F S+ Y+ GD+ VAVGW+ D+L A R N+ +P
Sbjct: 209 ATDLLLKLRPSIRYFHSSQYINDLANGDICVAVGWAGDILQAGNRAKEAKNGVNIQYSIP 268
Query: 124 KSGASLWADLWAIPAASR 141
K GA + D+ AIP ++
Sbjct: 269 KEGALAFFDVLAIPKDAK 286
>gi|46578512|ref|YP_009320.1| polyamine ABC transporter periplasmic polyamine-binding protein
[Desulfovibrio vulgaris str. Hildenborough]
gi|387151995|ref|YP_005700931.1| extracellular solute-binding protein [Desulfovibrio vulgaris RCH1]
gi|46447923|gb|AAS94579.1| polyamine ABC transporter, periplasmic polyamine-binding protein
[Desulfovibrio vulgaris str. Hildenborough]
gi|311232439|gb|ADP85293.1| extracellular solute-binding protein family 1 [Desulfovibrio
vulgaris RCH1]
Length = 345
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 16 APIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNL 74
A I W DL+RPE G + + + R+ G LK +G S NS + +++ A + L
Sbjct: 143 ATISSWNDLFRPEFKGGVILSDDLRDTFGIALKALGYSVNSTSEAEIKAA------YEWL 196
Query: 75 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 134
L R+FD T +AF +V + W+ D A+ ++A V PK G LW D
Sbjct: 197 LKLKPSVRVFDVTATKQAFIAEEVKGGMSWNGDAFIAMNENPDLAFVYPKEGLPLWVDSL 256
Query: 135 AIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQ 167
AIP IG + + H++I+F L+
Sbjct: 257 AIP---------IGAEHKDNA---HKFIDFLLR 277
>gi|85058903|ref|YP_454605.1| spermidine/putrescine ABC transporter substrate-binding protein
[Sodalis glossinidius str. 'morsitans']
gi|84779423|dbj|BAE74200.1| putrescine ABC transporter periplasmic component [Sodalis
glossinidius str. 'morsitans']
Length = 369
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 17/138 (12%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS+N A
Sbjct: 154 APVNSWDLVLKPENLAKLKSCGVSFLDAPFEIYATVLNYLGKDPNSDN-----AANYTGP 208
Query: 71 QQNLALLANQARL-FDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVP 123
+L L + L F S+ Y+ GD+ V +GW DV+ A R N+A +P
Sbjct: 209 ATDLLLKLRPSILYFHSSQYINDLANGDICVTIGWVGDVMQAANRAKEAKNGVNIAYSIP 268
Query: 124 KSGASLWADLWAIPAASR 141
K GA + D+ AIPA ++
Sbjct: 269 KEGALAFFDVLAIPADAK 286
>gi|254993330|ref|ZP_05275520.1| spermidine/putrescine-binding protein [Listeria monocytogenes FSL
J2-064]
Length = 357
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 109/245 (44%), Gaps = 37/245 (15%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN-SNNIDL 61
I Y K F N + W L+ PEL +I +++ REV+G L +G S N +N L
Sbjct: 143 IIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLGYSLNDTNKAHL 199
Query: 62 QVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVA 119
Q A K+ ++ N+ A++ ++ +L + + + VAV +S + + ++
Sbjct: 200 QAARDKLETMTPNVKAIVGDEIKLLMADN--------EAGVAVTFSGEAAEMLSENEDLE 251
Query: 120 VVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVI 179
V+PK G++LW D IP + K + G H++I F L+ A E +
Sbjct: 252 YVIPKDGSNLWFDNMVIPKTA----KNVDGA--------HKFINFMLKPENA-AINAEYV 298
Query: 180 PGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
A+P+A L LP+E+ S D P + L E + L + LS Y L
Sbjct: 299 GYATPNAKAVEL--LPKEI-----SSDERF---YPDMDELNNLEVYDNLGKRMLSYYNEL 348
Query: 240 VADLQ 244
+ +
Sbjct: 349 FLEFK 353
>gi|414082499|ref|YP_006991199.1| bacterial extracellular solute-binding family protein
[Carnobacterium maltaromaticum LMA28]
gi|412996075|emb|CCO09884.1| bacterial extracellular solute-binding family protein
[Carnobacterium maltaromaticum LMA28]
Length = 357
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 106/230 (46%), Gaps = 34/230 (14%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKIS-VQQNL- 74
++ W DLW P+LA + +++ REVIG L +G S NS N+ L A K+S + N+
Sbjct: 155 MQHWDDLWNPKLANNVMLIDGAREVIGLSLNSLGYSLNSKNMQQLTAASDKLSTLTPNVK 214
Query: 75 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 134
A++A++ +++ + VAV +S + + ++ V+P G++LW D +
Sbjct: 215 AIVADEIKMYMVQE--------ESAVAVTFSGEASEMLDNNEHLHYVIPSEGSNLWFDNF 266
Query: 135 AIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKL 194
IP ++ K+ + +I F L+ A E I ++P+ + + L
Sbjct: 267 VIPKTAK--NKEAA----------YAFINFMLEPKNAAQ-NAEYIGYSTPN--KAAMAYL 311
Query: 195 PEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVADLQ 244
P+EL++ + P E ++ E E L L+ Y L + +
Sbjct: 312 PKELVEDEQF--------YPSDETMSHLEVYEDLGAKYLAIYNDLFLEFK 353
>gi|15964467|ref|NP_384820.1| putrescine-binding periplasmic protein [Sinorhizobium meliloti
1021]
gi|384528421|ref|YP_005712509.1| extracellular solute-binding protein [Sinorhizobium meliloti
BL225C]
gi|433612474|ref|YP_007189272.1| Spermidine/putrescine-binding periplasmic protein [Sinorhizobium
meliloti GR4]
gi|15073644|emb|CAC45286.1| Probable putrescine-binding periplasmic protein [Sinorhizobium
meliloti 1021]
gi|333810597|gb|AEG03266.1| extracellular solute-binding protein family 1 [Sinorhizobium
meliloti BL225C]
gi|429550664|gb|AGA05673.1| Spermidine/putrescine-binding periplasmic protein [Sinorhizobium
meliloti GR4]
Length = 364
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 72/132 (54%), Gaps = 20/132 (15%)
Query: 20 DWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKI-SVQQ 72
+W ++ PE+A + I +++SP +++ S L Y+G + +S++ DL+ A + V+
Sbjct: 154 NWDVIFDPEIAAKFKDCGIHLLDSPTDIMPSALAYLGLNPDSHDQADLEKAADLLMKVRP 213
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSG 126
N+ R F S+ Y+ A GD+ +AVG+S DV A R + V +P+ G
Sbjct: 214 NI-------RKFHSSEYINALANGDICLAVGFSGDVFQARDRAAEAKAGVTVDYSIPEQG 266
Query: 127 ASLWADLWAIPA 138
A +W D+ AIPA
Sbjct: 267 AQMWFDMLAIPA 278
>gi|403058135|ref|YP_006646352.1| Putrescine-binding periplasmic protein [Pectobacterium carotovorum
subsp. carotovorum PCC21]
gi|402805461|gb|AFR03099.1| Putrescine-binding periplasmic protein [Pectobacterium carotovorum
subsp. carotovorum PCC21]
Length = 369
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 17/138 (12%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P E+ +VL Y G NS G +
Sbjct: 154 APVDSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYQGKDPNSTK-----PGDYTTS 208
Query: 71 QQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVP 123
+L L L R F S+ Y+ GD+ VAVGW+ D+L A R N+ +P
Sbjct: 209 ATDLLLKLRPSIRYFHSSQYINDLANGDICVAVGWAGDILQAGNRAKEAKNGVNIQYSIP 268
Query: 124 KSGASLWADLWAIPAASR 141
K GA + D+ AIP ++
Sbjct: 269 KEGALAFFDVLAIPKDAK 286
>gi|334315175|ref|YP_004547794.1| family 1 extracellular solute-binding protein [Sinorhizobium
meliloti AK83]
gi|384534820|ref|YP_005718905.1| putrescine-binding periplasmic protein [Sinorhizobium meliloti
SM11]
gi|407719548|ref|YP_006839210.1| putrescine-binding periplasmic protein [Sinorhizobium meliloti
Rm41]
gi|418399937|ref|ZP_12973482.1| family 1 extracellular solute-binding protein [Sinorhizobium
meliloti CCNWSX0020]
gi|334094169|gb|AEG52180.1| extracellular solute-binding protein family 1 [Sinorhizobium
meliloti AK83]
gi|336031712|gb|AEH77644.1| putrescine-binding periplasmic protein [Sinorhizobium meliloti
SM11]
gi|359506054|gb|EHK78571.1| family 1 extracellular solute-binding protein [Sinorhizobium
meliloti CCNWSX0020]
gi|407317780|emb|CCM66384.1| Putrescine-binding periplasmic protein [Sinorhizobium meliloti
Rm41]
Length = 364
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 72/132 (54%), Gaps = 20/132 (15%)
Query: 20 DWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKI-SVQQ 72
+W ++ PE+A + I +++SP +++ S L Y+G + +S++ DL+ A + V+
Sbjct: 154 NWDVIFDPEIAAKFKDCGIHLLDSPTDIMPSALAYLGLNPDSHDQADLEKAADLLMKVRP 213
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSG 126
N+ R F S+ Y+ A GD+ +AVG+S DV A R + V +P+ G
Sbjct: 214 NI-------RKFHSSEYINALANGDICLAVGFSGDVFQARDRAAEAKAGVTVDYSIPEQG 266
Query: 127 ASLWADLWAIPA 138
A +W D+ AIPA
Sbjct: 267 AQMWFDMLAIPA 278
>gi|167855017|ref|ZP_02477791.1| hypothetical protein HPS_10240 [Haemophilus parasuis 29755]
gi|167853865|gb|EDS25105.1| hypothetical protein HPS_10240 [Haemophilus parasuis 29755]
Length = 346
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 33/230 (14%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IA+ + ++ N W DLW+PE G++ +++ REV L +G N+ +
Sbjct: 134 IAFNTNSYKGDNFTA---WGDLWKPEFKGKVQLLDDAREVFNIALLKLGQDPNTKD---- 186
Query: 63 VAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVV 122
A K + ++ L L N F S + +F G+V V W+ V A K + V +V
Sbjct: 187 PAVIKAAYEELLKLRPN-VLAFSSDNPANSFISGEVEVGQLWNGSVRIAKKEQAPVNMVF 245
Query: 123 PKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEV-IPG 181
PK G LW D AIP+ + P H+ I + L A E+ P
Sbjct: 246 PKEGPVLWVDTLAIPS-----------NAKNPD-AAHKLINYLLSAPVAEKLTLEIGYPT 293
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEA 231
++ ALE KLP+E+ ++D + P +E+L + ++ + + +A
Sbjct: 294 SNVKALE----KLPKEI-----TEDPAI---YPTSEVLQKSQWQDDVGDA 331
>gi|398953666|ref|ZP_10675497.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM33]
gi|398153641|gb|EJM42138.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM33]
Length = 365
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 92/204 (45%), Gaps = 30/204 (14%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP W L++PE A + IS ++SP E+I + L Y+G Y N+ D Q +
Sbjct: 151 APTNSWDLLFKPENAEKLKACGISFLDSPTEMIPTALHYLG--YPVNDQDKQ------HI 202
Query: 71 QQNLALLAN---QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVV 121
Q AL F S+ Y+ G++ VAVG+S DVL A R +
Sbjct: 203 AQAEALFMKIRPNVAYFHSSKYISDLANGNICVAVGYSGDVLQAKARAQEAGDRVKIDYS 262
Query: 122 VPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPL--IHQWIEFCLQTARALPFKQE 177
+PK GA+ + D+ AIP AA+ + P + I I + A A P E
Sbjct: 263 IPKEGAASFYDMLAIPRDAANVENAYLFMNFLMRPDVIADITNNIGYSNANAAATPLVDE 322
Query: 178 VI---PGASPS-ALETTLVKLPEE 197
I PG+ PS A+ TL +P++
Sbjct: 323 AIRNDPGSYPSEAVMATLYAVPDQ 346
>gi|307947450|ref|ZP_07662783.1| putrescine-binding periplasmic protein [Roseibium sp. TrichSKD4]
gi|307769268|gb|EFO28496.1| putrescine-binding periplasmic protein [Roseibium sp. TrichSKD4]
Length = 363
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 70/135 (51%), Gaps = 18/135 (13%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKIS 69
AP++ W L++ E + + ++++P E+I + L Y+G +S + D++ AG
Sbjct: 149 APVDSWDLLFKEENISKLKDCGVHLLDAPTELIPAALNYLGMDPDSKDKGDIEKAG---- 204
Query: 70 VQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVP 123
+ L + + F S+ Y+ A GD+ VAVGWS DVL A R + V +P
Sbjct: 205 --ELLKTIRPYVQKFHSSEYINALANGDICVAVGWSGDVLQARDRAAEADNGVTVEYSIP 262
Query: 124 KSGASLWADLWAIPA 138
K GA +W D A+PA
Sbjct: 263 KEGALMWFDQMAVPA 277
>gi|205357017|ref|ZP_02344173.2| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205324502|gb|EDZ12341.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
Length = 371
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 156 APVNSWDLALKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL 214
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N++ +PK
Sbjct: 215 ---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPK 271
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 272 EGAMAFFDVFAMPADAK 288
>gi|261495061|ref|ZP_05991528.1| Lpp38 [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261309303|gb|EEY10539.1| Lpp38 [Mannheimia haemolytica serotype A2 str. OVINE]
Length = 364
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 8/139 (5%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IA+ + ++ W DLW+PE AG++ +++ REV L +G + N+ N D +
Sbjct: 152 IAFNTADYKGETFT---SWGDLWKPEFAGKVQLLDDAREVFNIALLKLGKNPNTTNPD-E 207
Query: 63 VAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVV 122
+ + L L F S + +F G+V V W+ V A K + V +V
Sbjct: 208 IK----EAFEELKKLRPNVLSFTSDNPANSFIAGEVSVGQLWNGSVRIAKKENAPVDMVF 263
Query: 123 PKSGASLWADLWAIPAASR 141
PK G LW D AIPA ++
Sbjct: 264 PKEGPVLWVDTLAIPANAK 282
>gi|398816806|ref|ZP_10575447.1| spermidine/putrescine-binding periplasmic protein [Brevibacillus
sp. BC25]
gi|398031945|gb|EJL25313.1| spermidine/putrescine-binding periplasmic protein [Brevibacillus
sp. BC25]
Length = 351
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 15/142 (10%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY K ++ P W DLW GR+ M+N PREV+G L G S ++ N +
Sbjct: 140 IAYNKKYVKE---TPTS-WNDLWNEAYKGRVIMLNDPREVMGMALIKNGFSNSTTNTE-- 193
Query: 63 VAGGKISVQQNLALLAN---QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVA 119
++++ A L FD+ + + + W+ WS D + +V
Sbjct: 194 ------ELEKSFADLKKVVPNVVAFDTDNIKQKMIAEEAWIGTVWSGDAAFIHAQNPDVE 247
Query: 120 VVVPKSGASLWADLWAIPAASR 141
V+PK GA++WAD AIP ++
Sbjct: 248 YVIPKEGATIWADTLAIPKGAK 269
>gi|291616867|ref|YP_003519609.1| PotF [Pantoea ananatis LMG 20103]
gi|291151897|gb|ADD76481.1| PotF [Pantoea ananatis LMG 20103]
Length = 369
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS++ +G +
Sbjct: 154 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSDAK-DYSGAATDL 212
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ G++ VA+GWS D+L A R N+ VPK
Sbjct: 213 ---LLKLRPNIRYFHSSQYINDLANGNICVAIGWSGDILQAKNRAEKAKNGVNIGYSVPK 269
Query: 125 SGASLWADLWAIPAASR 141
GA + D+ AIP ++
Sbjct: 270 EGALAFFDMMAIPKDAK 286
>gi|378767926|ref|YP_005196396.1| putrescine-binding periplasmic protein precursor PotF [Pantoea
ananatis LMG 5342]
gi|386015231|ref|YP_005933511.1| putrescine-binding periplasmic protein precursor PotF [Pantoea
ananatis AJ13355]
gi|386080026|ref|YP_005993551.1| putrescine-binding periplasmic protein PotF [Pantoea ananatis PA13]
gi|327393293|dbj|BAK10715.1| putrescine-binding periplasmic protein precursor PotF [Pantoea
ananatis AJ13355]
gi|354989207|gb|AER33331.1| putrescine-binding periplasmic protein PotF [Pantoea ananatis PA13]
gi|365187409|emb|CCF10359.1| putrescine-binding periplasmic protein precursor PotF [Pantoea
ananatis LMG 5342]
Length = 369
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS++ +G +
Sbjct: 154 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSDAK-DYSGAATDL 212
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ G++ VA+GWS D+L A R N+ VPK
Sbjct: 213 ---LLKLRPNIRYFHSSQYINDLANGNICVAIGWSGDILQAKNRAEKAKNGVNIGYSVPK 269
Query: 125 SGASLWADLWAIPAASR 141
GA + D+ AIP ++
Sbjct: 270 EGALAFFDMMAIPKDAK 286
>gi|339489912|ref|YP_004704440.1| extracellular solute-binding protein [Pseudomonas putida S16]
gi|338840755|gb|AEJ15560.1| extracellular solute-binding protein [Pseudomonas putida S16]
Length = 381
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 67/136 (49%), Gaps = 18/136 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQ 71
I+ W L+ PE + ++ ++S E++ +VL YMG NS N D Q A +
Sbjct: 169 IDSWAVLFEPENMKKLAKCGVAFLDSADEMLPAVLNYMGLDPNSTNAKDYQAA------E 222
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPA------VKRMSNVAVVVPKS 125
+ L + F S+ Y+ GD+ VA G+S DV A K+ N+A +PK
Sbjct: 223 KKLLAVRPYVTYFHSSKYITDLANGDICVAAGFSGDVFQAKARAEEAKKGVNLAYAIPKE 282
Query: 126 GASLWADLWAIPAASR 141
G +LW D+ AIP ++
Sbjct: 283 GGNLWFDVLAIPKDAK 298
>gi|374331995|ref|YP_005082179.1| putrescine-binding periplasmic protein [Pseudovibrio sp. FO-BEG1]
gi|359344783|gb|AEV38157.1| Putrescine-binding periplasmic protein [Pseudovibrio sp. FO-BEG1]
Length = 368
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 70/135 (51%), Gaps = 22/135 (16%)
Query: 17 PIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQ 71
P++ W+ ++ PE+ + I M+++P E+I + L ++G + +S++ K ++
Sbjct: 155 PVDSWEIIFNPEILAKFQDCGIHMLDAPTELIPAALNHLGLNPDSHD--------KAEIE 206
Query: 72 QNLALLAN---QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVV 122
+ LL + F S+ Y+ A GD+ +A+GWS DV A R + V ++
Sbjct: 207 KAAELLKTIRPYVQKFHSSEYINALANGDICLAIGWSGDVFQARDRAAEADNGVTVNYII 266
Query: 123 PKSGASLWADLWAIP 137
PK GA +W D AIP
Sbjct: 267 PKEGALMWFDQMAIP 281
>gi|33596323|ref|NP_883966.1| polyamine transport protein [Bordetella parapertussis 12822]
gi|33566092|emb|CAE36992.1| putative polyamine transport protein [Bordetella parapertussis]
Length = 400
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 22/134 (16%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
+ +W L++PE A + ISM++ +V +VLKY+G NS N D ++
Sbjct: 188 LANWDMLFKPENAAKLKECGISMLDEAAQVFPAVLKYLGKDPNSANTD--------DYKE 239
Query: 73 NLALLAN---QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVP 123
LALL R F S+ Y+ +GD+ + G+S DV+ A +R + +P
Sbjct: 240 ALALLKQIRPYIRQFSSSGYIDELAVGDLCMVYGFSGDVMIARRRAQEARKPYEINYFIP 299
Query: 124 KSGASLWADLWAIP 137
K GA W D+ AIP
Sbjct: 300 KGGAPAWFDVMAIP 313
>gi|257465625|ref|ZP_05629996.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Actinobacillus minor 202]
gi|257451285|gb|EEV25328.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Actinobacillus minor 202]
Length = 359
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 88/203 (43%), Gaps = 31/203 (15%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALL 77
+ W DLWR E G++ ++N PREV L G S NS N + ++ S + L L
Sbjct: 158 LSSWGDLWREEYKGKLLLMNDPREVFHIALLLDGKSPNSEN-EQEIK----SAYERLKKL 212
Query: 78 ANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 137
+F+S + G+V V + WS A ++ + PK GA LW D + IP
Sbjct: 213 IPNVLVFNSDSPEMPYLQGEVSVGMQWSGSAYRAKNENKDLQFIFPKEGAVLWMDNYVIP 272
Query: 138 AASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEE 197
G V + H++I+F L+ P ++ +ET +P E
Sbjct: 273 K----------GAVNKEAA--HKFIDFLLR------------PESAKEVIETMGFSMPNE 308
Query: 198 LLKG-KPSQDTNLIVGVPP-AEI 218
+K P++ N + PP AEI
Sbjct: 309 GVKALLPAETVNDPLIFPPKAEI 331
>gi|431805015|ref|YP_007231918.1| extracellular solute-binding protein [Pseudomonas putida HB3267]
gi|430795780|gb|AGA75975.1| extracellular solute-binding protein [Pseudomonas putida HB3267]
Length = 364
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 67/136 (49%), Gaps = 18/136 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQ 71
I+ W L+ PE + ++ ++S E++ +VL YMG NS N D Q A +
Sbjct: 152 IDSWAVLFEPENMKKLAKCGVAFLDSADEMLPAVLNYMGLDPNSTNAKDYQAA------E 205
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPA------VKRMSNVAVVVPKS 125
+ L + F S+ Y+ GD+ VA G+S DV A K+ N+A +PK
Sbjct: 206 KKLLAVRPYVTYFHSSKYITDLANGDICVAAGFSGDVFQAKTRAEEAKKGVNLAYAIPKE 265
Query: 126 GASLWADLWAIPAASR 141
G +LW D+ AIP ++
Sbjct: 266 GGNLWFDVLAIPKDAK 281
>gi|336249457|ref|YP_004593167.1| putrescine ABC transporter periplasmic-binding protein
[Enterobacter aerogenes KCTC 2190]
gi|444352385|ref|YP_007388529.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Enterobacter aerogenes EA1509E]
gi|334735513|gb|AEG97888.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Enterobacter aerogenes KCTC 2190]
gi|443903215|emb|CCG30989.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Enterobacter aerogenes EA1509E]
Length = 370
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 17 PIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQ 71
P+ W + +PE + +S +++P E+ +VL Y+G NS D G +
Sbjct: 156 PLNSWDLVLKPENLEKLKSCGVSFLDAPEEIFSTVLNYLGKDPNSTKAD-DYTGPATDL- 213
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
L L R F S+ Y+ GD+ VA+GW+ DV A R N++ +PK
Sbjct: 214 --LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNISYFIPKE 271
Query: 126 GASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 272 GALAFFDVFAMPADAK 287
>gi|255655004|ref|ZP_05400413.1| spermidine/putrescine ABC transporter,substrate-binding lipoprotein
[Clostridium difficile QCD-23m63]
gi|296449753|ref|ZP_06891523.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Clostridium difficile
NAP08]
gi|296877930|ref|ZP_06901949.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Clostridium difficile
NAP07]
gi|296261477|gb|EFH08302.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Clostridium difficile
NAP08]
gi|296430998|gb|EFH16826.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Clostridium difficile
NAP07]
Length = 350
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 102/239 (42%), Gaps = 35/239 (14%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDL 61
I Y K + + PI+ W LW P+ G I M +S R+ IG LK +G S NS N ++
Sbjct: 140 ILYNKKEVKD----PIDSWNILWNPKYKGNIMMFDSVRDTIGITLKKLGYSMNSVNPKEI 195
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
A + Q++L L D + G G+V + + +S D + +++ ++
Sbjct: 196 NEAKNLLMKQKDLVLAYVNDEGKD-----RLLG-GEVAMGMLYSGDAVTLMEQNPDLDYA 249
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
+PK G + W D +P ++ + + +I F L A E I
Sbjct: 250 IPKEGTNKWVDAMCVPTTAQNKKEA------------ELFINFLLDPENA-KVNAEYIGY 296
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEA-TLSDYEWL 239
++P+ T +KL + + P V P E+L +CE E + E L D W+
Sbjct: 297 STPN---TGALKLLDPEITENP-------VAYPSKEVLNKCETFEDIGENIKLYDKAWI 345
>gi|77461625|ref|YP_351132.1| extracellular solute-binding protein [Pseudomonas fluorescens
Pf0-1]
gi|77385628|gb|ABA77141.1| putrescine ABC transport system, substrate-binding periplasmic
protein precursor [Pseudomonas fluorescens Pf0-1]
Length = 375
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 66/135 (48%), Gaps = 18/135 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W L+ PE + ++ ++S E++ +VL YMG + NS N D + A K
Sbjct: 163 IDSWSVLFEPENIKKLHSCGVAFLDSADEMMPTVLNYMGLNANSTNPKDYEKATAK---- 218
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
L + F S+ Y+ GD+ VA+G+S D+ A R N+A +PK
Sbjct: 219 --LLAVRPYVTYFHSSKYIGDLANGDICVAIGFSGDIFQAKNRAEEAKKGVNIAYSIPKE 276
Query: 126 GASLWADLWAIPAAS 140
G +LW D+ AIP S
Sbjct: 277 GGALWFDMLAIPKDS 291
>gi|407803625|ref|ZP_11150459.1| extracellular solute-binding protein [Alcanivorax sp. W11-5]
gi|407022469|gb|EKE34222.1| extracellular solute-binding protein [Alcanivorax sp. W11-5]
Length = 351
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 96/216 (44%), Gaps = 28/216 (12%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALL 77
+ W DLW P+ GR+ + N REV L+ +G S NS + + ++A + + L L
Sbjct: 151 VTKWADLWDPKYKGRVLLTNDVREVFHIGLRVLGYSGNSTS-EEEIA----AAYEKLREL 205
Query: 78 ANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 137
R F+S + G+ + + W+ + + A + + +A V P+ GA +W D + IP
Sbjct: 206 MPSVRAFNSDAPRMPYLEGEADIGLIWNGEAVMAQEELPELAYVYPEEGAVIWVDNFVIP 265
Query: 138 AASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEE 197
+R V H++I+F LQ A +E I A+P+ L LP E
Sbjct: 266 KNAR--------NVEA----AHKFIDFVLQPEVAAQISEE-IGYATPNLPAREL--LPPE 310
Query: 198 LLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATL 233
+ + + S P E L EF + EA L
Sbjct: 311 VRENRTS--------YPTEEDLENAEFQSDVGEALL 338
>gi|262274396|ref|ZP_06052207.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Grimontia hollisae CIP 101886]
gi|262220959|gb|EEY72273.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Grimontia hollisae CIP 101886]
Length = 347
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 30/217 (13%)
Query: 16 APIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLA 75
+ + W DLW+PE AG I +++ R+V G LK G S N+ N + ++ + L
Sbjct: 147 SKVTKWADLWKPEFAGHIILLDDVRDVFGMALKAKGYSINTTN-EAEIK----EAYEMLK 201
Query: 76 LLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWA 135
L +++S F G+V + W+ + A M N+ V P+ G+ LW D +
Sbjct: 202 TLRPNVVVYNSDAPHVPFVTGEVGIGQQWNGNAYLAQAEMDNIQFVYPEEGSILWMDNFI 261
Query: 136 IPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEV-IPGASPSALETTLVKL 194
IP + L H++I+F + +E+ P S A E KL
Sbjct: 262 IPKGAE------------KVDLAHKFIDFMYRPENQAAMVEELGYPAPSKRAKE----KL 305
Query: 195 PEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEA 231
E + N+I P E + + EF + +A
Sbjct: 306 SAEY------TENNVI--FPSDEDVEKGEFTNDVGDA 334
>gi|255521833|ref|ZP_05389070.1| spermidine/putrescine-binding protein [Listeria monocytogenes FSL
J1-175]
Length = 287
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 107/245 (43%), Gaps = 37/245 (15%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN-SNNIDL 61
I Y K F N + W L+ PEL +I +++ REV+G L +G S N +N L
Sbjct: 73 IIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLGYSLNDTNKAHL 129
Query: 62 QVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVA 119
Q A K+ ++ N+ A++ ++ +L + VAV +S + + ++
Sbjct: 130 QAARDKLETMTPNVKAIVGDEIKLL--------MADNEAGVAVTFSGEAAEMLSENEDLE 181
Query: 120 VVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVI 179
V+PK G++LW D IP + K + G H++I F L+ A E +
Sbjct: 182 YVIPKDGSNLWFDNMVIPKTA----KNVDG--------AHKFINFMLKPENA-AINAEYV 228
Query: 180 PGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
A+P+A L LP+E+ S D P + L E + L + LS Y L
Sbjct: 229 GYATPNAKAVEL--LPKEI-----SSDERF---YPDMDELNNLEVYDNLGKRMLSYYNEL 278
Query: 240 VADLQ 244
+ +
Sbjct: 279 FLEFK 283
>gi|409422830|ref|ZP_11259910.1| periplasmic putrescine-binding protein [Pseudomonas sp. HYS]
Length = 362
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 68/140 (48%), Gaps = 20/140 (14%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
++ W ++ PE + +S ++S E+ ++L YMG SNN D + A K
Sbjct: 150 VDSWAVMFEPENLKKLSQCGVSFMDSADELFPAILNYMGMDPRSNNPEDYKKAEAK---- 205
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
L L F S+ Y+ GD+ VA G+S DV A R N+A +PK
Sbjct: 206 --LLTLRPYITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYAIPKE 263
Query: 126 GASLWADLWAIP--AASRLE 143
G++LW DL AIP A++R E
Sbjct: 264 GSNLWFDLLAIPSDASNRKE 283
>gi|399001424|ref|ZP_10704138.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM18]
gi|398127546|gb|EJM16953.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM18]
Length = 219
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 63/133 (47%), Gaps = 18/133 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQ 71
I+ W + PE + +SM++S EV +VL YMG S N D + A K
Sbjct: 7 IDSWAVFFEPENLKKLSQCGVSMMDSADEVFPAVLNYMGMDPRSENPEDFKKAEAK---- 62
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
L + F S+ Y+ G++ VA G+S DV A R N+A +PK
Sbjct: 63 --LLAIRPYITYFHSSKYVSDLANGNICVAFGYSGDVFQAANRAKDAKNGVNIAYSIPKE 120
Query: 126 GASLWADLWAIPA 138
G++LW DL AIPA
Sbjct: 121 GSNLWFDLLAIPA 133
>gi|33593342|ref|NP_880986.1| putrescine ABC transporter [Bordetella pertussis Tohama I]
gi|384204637|ref|YP_005590376.1| putative polyamine transport protein [Bordetella pertussis CS]
gi|33572698|emb|CAE42621.1| putative polyamine transport protein [Bordetella pertussis Tohama
I]
gi|332382751|gb|AEE67598.1| putative polyamine transport protein [Bordetella pertussis CS]
Length = 367
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 22/134 (16%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
+ +W L++PE A + ISM++ +V +VLKY+G NS N D ++
Sbjct: 155 LANWDMLFKPENAAKLKECGISMLDEAAQVFPAVLKYLGKDPNSANTD--------DYKE 206
Query: 73 NLALLAN---QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVP 123
LALL R F S+ Y+ +GD+ + G+S DV+ A +R + +P
Sbjct: 207 ALALLKQIRPYIRQFSSSGYIDELAVGDLCMVYGFSGDVMIARRRAQEARKPYEINYFIP 266
Query: 124 KSGASLWADLWAIP 137
K GA W D+ AIP
Sbjct: 267 KGGAPAWFDVMAIP 280
>gi|398798502|ref|ZP_10557801.1| spermidine/putrescine-binding periplasmic protein [Pantoea sp.
GM01]
gi|398100409|gb|EJL90648.1| spermidine/putrescine-binding periplasmic protein [Pantoea sp.
GM01]
Length = 369
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 70/136 (51%), Gaps = 15/136 (11%)
Query: 17 PIEDWKDLWRPE----LAG-RISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQ 71
P++ W + +PE L G +S +++P E+ +VL Y+G NS++ +G +
Sbjct: 155 PLDSWDLVLKPENLEKLKGCGVSFLDAPEEIFATVLNYLGKDPNSSDAK-DYSGAATDL- 212
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
L L R F S+ Y+ G++ VA+GWS D+L A R ++ +VPK
Sbjct: 213 --LLKLRPNIRYFHSSQYINDLANGNICVAIGWSGDILQAKDRADKANNGVHLGYIVPKQ 270
Query: 126 GASLWADLWAIPAASR 141
GA + D++AIP ++
Sbjct: 271 GALAFFDMFAIPKDAK 286
>gi|423099912|ref|ZP_17087619.1| ABC transporter, solute-binding protein [Listeria innocua ATCC
33091]
gi|370793645|gb|EHN61478.1| ABC transporter, solute-binding protein [Listeria innocua ATCC
33091]
Length = 357
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 109/245 (44%), Gaps = 37/245 (15%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN-SNNIDL 61
I Y K F N + W L+ PEL +I +++ REV+G L +G S N +N L
Sbjct: 143 IIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLGYSLNDTNKAHL 199
Query: 62 QVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVA 119
Q A K+ ++ N+ A++ ++ +L + + + VAV +S + + ++
Sbjct: 200 QAARDKLETMTPNVKAIVGDEIKLLMADN--------EAGVAVTFSGEAAEMLSENEDLE 251
Query: 120 VVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVI 179
V+PK G++LW D IP + K I G H++I F L+ A E +
Sbjct: 252 YVIPKDGSNLWFDNMVIPKTA----KNIDGA--------HKFINFMLKPENA-AINAEYV 298
Query: 180 PGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
A+P+ E + LP+E+ S D P + L E + L + LS Y L
Sbjct: 299 GYATPN--EKAVKLLPKEI-----SSDERF---YPDMDELNNLEVYDNLGKRMLSYYNEL 348
Query: 240 VADLQ 244
+ +
Sbjct: 349 FLEFK 353
>gi|227329301|ref|ZP_03833325.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 369
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 17/138 (12%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y G NS G +
Sbjct: 154 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYQGKDPNSTK-----PGDYTTS 208
Query: 71 QQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVP 123
+L L L R F S+ Y+ GD+ VAVGW+ D+L A R N+ +P
Sbjct: 209 ATDLLLKLRPNIRYFHSSQYINDLANGDICVAVGWAGDILQAGNRAKEAKNGVNIQYSIP 268
Query: 124 KSGASLWADLWAIPAASR 141
K GA + D+ AIP ++
Sbjct: 269 KEGALAFFDVLAIPKDAK 286
>gi|319897986|ref|YP_004136183.1| spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
influenzae F3031]
gi|317433492|emb|CBY81875.1| spermidine/putrescine-binding periplasmic protein 2 precursor
[Haemophilus influenzae F3031]
Length = 350
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 71/155 (45%), Gaps = 19/155 (12%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLAL 76
I W DLW+PE G++ M + REV L G S N+ N D++ A ++ L
Sbjct: 151 ITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIKTAYERLE-----KL 205
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
L N A F+S + G+V + + W+ A K ++ V PK GA W D +AI
Sbjct: 206 LPNVAT-FNSDSPEVPYVQGEVAIGMIWNGSAYLAQKENQSLQFVYPKEGAIFWMDNYAI 264
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA 171
P ++ V G H++I+F L+ A
Sbjct: 265 PTTAK--------NVEGA----HKFIDFLLRPENA 287
>gi|255029864|ref|ZP_05301815.1| spermidine/putrescine-binding protein [Listeria monocytogenes LO28]
Length = 296
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 107/245 (43%), Gaps = 37/245 (15%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN-SNNIDL 61
I Y K F N + W L+ PEL +I +++ REV+G L +G S N +N L
Sbjct: 82 IIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLGYSLNDTNKAHL 138
Query: 62 QVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVA 119
Q A K+ ++ N+ A++ ++ +L + VAV +S + + ++
Sbjct: 139 QAARDKLETMTPNVKAIVGDEIKLL--------MADNEAGVAVTFSGEAAEMLSENEDLE 190
Query: 120 VVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVI 179
V+PK G++LW D IP + K + G H++I F L+ A E +
Sbjct: 191 YVIPKDGSNLWFDNMVIPKTA----KNVDGA--------HKFINFMLKPENA-AINAEYV 237
Query: 180 PGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
A+P+A L LP+E+ S D P + L E + L + LS Y L
Sbjct: 238 GYATPNAKAVEL--LPKEI-----SSDERF---YPDMDELNNLEVYDNLGKRMLSYYNEL 287
Query: 240 VADLQ 244
+ +
Sbjct: 288 FLEFK 292
>gi|421529430|ref|ZP_15975965.1| extracellular solute-binding protein [Pseudomonas putida S11]
gi|402213158|gb|EJT84520.1| extracellular solute-binding protein [Pseudomonas putida S11]
Length = 288
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 67/136 (49%), Gaps = 18/136 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQ 71
I+ W L+ PE + ++ ++S E++ +VL YMG NS N D Q A +
Sbjct: 76 IDSWAVLFEPENMKKLAKCGVAFLDSADEMLPAVLNYMGLDPNSTNAKDYQAA------E 129
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPA------VKRMSNVAVVVPKS 125
+ L + F S+ Y+ GD+ VA G+S DV A K+ N+A +PK
Sbjct: 130 KKLLAVRPYVTYFHSSKYITDLANGDICVAAGFSGDVFQAKTRAEEAKKGVNLAYAIPKE 189
Query: 126 GASLWADLWAIPAASR 141
G +LW D+ AIP ++
Sbjct: 190 GGNLWFDVLAIPKDAK 205
>gi|419957687|ref|ZP_14473753.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Enterobacter cloacae subsp. cloacae
GS1]
gi|388607845|gb|EIM37049.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Enterobacter cloacae subsp. cloacae
GS1]
Length = 372
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
++ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 159 LDSWDVVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL-- 215
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSG 126
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK G
Sbjct: 216 -LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEG 274
Query: 127 ASLWADLWAIPAASR 141
A + D++A+PA ++
Sbjct: 275 ALAFFDVFAMPADAK 289
>gi|418021465|ref|ZP_12660549.1| Spermidine/putrescine-binding periplasmic protein [Candidatus
Regiella insecticola R5.15]
gi|347603175|gb|EGY28056.1| Spermidine/putrescine-binding periplasmic protein [Candidatus
Regiella insecticola R5.15]
Length = 379
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 17/138 (12%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKI-S 69
AP W + + E + +S +++P E+ ++L Y+G NS Q+A S
Sbjct: 164 APTNSWDLVLKAENLAKLKNCGVSFLDAPSEIFATLLHYLGKDANS-----QLASDYTGS 218
Query: 70 VQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVP 123
+ L L R F S+ Y+ GD+ VAVGW+ D++ A R N+A +P
Sbjct: 219 ATELLLTLRPSIRYFHSSQYINDLANGDICVAVGWNGDIVQAANRAKEAKNGVNIAYSIP 278
Query: 124 KSGASLWADLWAIPAASR 141
K GA + D++A+PA ++
Sbjct: 279 KEGALVTFDVFAMPADAK 296
>gi|449468189|ref|XP_004151804.1| PREDICTED: putrescine-binding periplasmic protein-like, partial
[Cucumis sativus]
Length = 292
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
++ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 85 LDSWDVVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL-- 141
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSG 126
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK G
Sbjct: 142 -LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEG 200
Query: 127 ASLWADLWAIPAASR 141
A + D++A+PA ++
Sbjct: 201 ALAFFDVFAMPADAK 215
>gi|50121601|ref|YP_050768.1| putrescine ABC transporter periplasmic-binding protein
[Pectobacterium atrosepticum SCRI1043]
gi|49612127|emb|CAG75577.1| putrescine-binding periplasmic protein [Pectobacterium atrosepticum
SCRI1043]
Length = 369
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 17/138 (12%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P E+ +VL Y G NS G +
Sbjct: 154 APVDSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYQGKDPNSTK-----PGDYTTS 208
Query: 71 QQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVP 123
+L L L R F S+ Y+ GD+ VAVGW+ D++ A R N+ +P
Sbjct: 209 ATDLLLKLRPSIRYFHSSQYINDLANGDICVAVGWAGDIMQAGNRAKEAKNGVNIQYSIP 268
Query: 124 KSGASLWADLWAIPAASR 141
K GA + D+ AIP ++
Sbjct: 269 KEGALAFFDVLAIPKDAK 286
>gi|410420984|ref|YP_006901433.1| polyamine transport protein [Bordetella bronchiseptica MO149]
gi|427817033|ref|ZP_18984096.1| putative polyamine transport protein [Bordetella bronchiseptica
D445]
gi|427826066|ref|ZP_18993128.1| putative polyamine transport protein [Bordetella bronchiseptica
Bbr77]
gi|408448279|emb|CCJ59960.1| putative polyamine transport protein [Bordetella bronchiseptica
MO149]
gi|410568033|emb|CCN16054.1| putative polyamine transport protein [Bordetella bronchiseptica
D445]
gi|410591331|emb|CCN06429.1| putative polyamine transport protein [Bordetella bronchiseptica
Bbr77]
Length = 367
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 22/134 (16%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
+ +W L++PE A + ISM++ +V +VLKY+G NS N D ++
Sbjct: 155 LANWDMLFKPENAAKLKECGISMLDEAAQVFPAVLKYLGKDPNSANTD--------DYKE 206
Query: 73 NLALLAN---QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVP 123
LALL R F S+ Y+ +GD+ + G+S DV+ A +R + +P
Sbjct: 207 ALALLKQIRPYIRQFSSSGYIDELAVGDLCMVYGFSGDVMIARRRAQEARKPYEINYFIP 266
Query: 124 KSGASLWADLWAIP 137
K GA W D+ AIP
Sbjct: 267 KGGAPAWFDVMAIP 280
>gi|410472389|ref|YP_006895670.1| polyamine transport protein [Bordetella parapertussis Bpp5]
gi|408442499|emb|CCJ49042.1| putative polyamine transport protein [Bordetella parapertussis
Bpp5]
Length = 367
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 22/134 (16%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
+ +W L++PE A + ISM++ +V +VLKY+G NS N D ++
Sbjct: 155 LANWDMLFKPENAAKLKECGISMLDEAAQVFPAVLKYLGKDPNSANTD--------DYKE 206
Query: 73 NLALLAN---QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVP 123
LALL R F S+ Y+ +GD+ + G+S DV+ A +R + +P
Sbjct: 207 ALALLKQIRPYIRQFSSSGYIDELAVGDLCMVYGFSGDVMIARRRAQEARKPYEINYFIP 266
Query: 124 KSGASLWADLWAIP 137
K GA W D+ AIP
Sbjct: 267 KGGAPAWFDVMAIP 280
>gi|33602390|ref|NP_889950.1| polyamine transport protein [Bordetella bronchiseptica RB50]
gi|412338542|ref|YP_006967297.1| polyamine transport protein [Bordetella bronchiseptica 253]
gi|427815479|ref|ZP_18982543.1| putative polyamine transport protein [Bordetella bronchiseptica
1289]
gi|33576829|emb|CAE33909.1| putative polyamine transport protein [Bordetella bronchiseptica
RB50]
gi|408768376|emb|CCJ53138.1| putative polyamine transport protein [Bordetella bronchiseptica
253]
gi|410566479|emb|CCN24040.1| putative polyamine transport protein [Bordetella bronchiseptica
1289]
Length = 367
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 22/134 (16%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
+ +W L++PE A + ISM++ +V +VLKY+G NS N D ++
Sbjct: 155 LANWDMLFKPENAAKLKECGISMLDEAAQVFPAVLKYLGKDPNSANTD--------DYKE 206
Query: 73 NLALLAN---QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVP 123
LALL R F S+ Y+ +GD+ + G+S DV+ A +R + +P
Sbjct: 207 ALALLKQIRPYIRQFSSSGYIDELAVGDLCMVYGFSGDVMIARRRAQEARKPYEINYFIP 266
Query: 124 KSGASLWADLWAIP 137
K GA W D+ AIP
Sbjct: 267 KGGAPAWFDVMAIP 280
>gi|1573475|gb|AAC22155.1| spermidine/putrescine ABC transporter, periplasmic-binding protein
(potD) [Haemophilus influenzae Rd KW20]
Length = 312
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 71/155 (45%), Gaps = 19/155 (12%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLAL 76
I W DLW+PE G++ M + REV L G S N+ N D++ A ++ L
Sbjct: 113 ITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIKTAYERLE-----KL 167
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
L N A F+S + G+V + + W+ A K ++ V PK GA W D +AI
Sbjct: 168 LPNVAT-FNSDSPEVPYVQGEVAIGMIWNGSAYLAQKENQSLQFVYPKEGAIFWMDNYAI 226
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA 171
P ++ V G H++I+F L+ A
Sbjct: 227 PTTAK--------NVEG----AHKFIDFLLRPENA 249
>gi|409436131|ref|ZP_11263323.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Rhizobium mesoamericanum STM3625]
gi|408752041|emb|CCM74472.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Rhizobium mesoamericanum STM3625]
Length = 366
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 67/130 (51%), Gaps = 18/130 (13%)
Query: 24 LWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALL 77
L+ P +A + I ++++P++VI S L Y+G NS+ DLQ AG + L +
Sbjct: 160 LFDPTVAEKFKDCGIYVLDAPKDVIPSALTYLGLDPNSSKPADLQKAG------ELLEKI 213
Query: 78 ANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWA 131
R F S+ Y+ A GD+ +A G+S D+ A R + + +P GA +W
Sbjct: 214 RPFVRKFHSSEYINALANGDICIAFGYSGDIFQAANRATEAKNGVEIGYSIPSQGAQMWF 273
Query: 132 DLWAIPAASR 141
D+ AIPA ++
Sbjct: 274 DMMAIPADAK 283
>gi|398973895|ref|ZP_10684687.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM25]
gi|398142322|gb|EJM31222.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM25]
Length = 362
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 64/133 (48%), Gaps = 18/133 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W L+ PE + +SM++S EV ++L YMG S D + A +
Sbjct: 150 IDSWAVLFEPENLKKLTQCGVSMMDSADEVFPAILNYMGMDPRSEKPEDYKKA------E 203
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
+ L + F S+ Y+ GD+ VA G+S DV A R N+A +PK
Sbjct: 204 EKLLSIRPYITYFHSSKYVSDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYSIPKE 263
Query: 126 GASLWADLWAIPA 138
GA+LW DL AIPA
Sbjct: 264 GANLWFDLLAIPA 276
>gi|229844342|ref|ZP_04464482.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae 6P18H1]
gi|229812591|gb|EEP48280.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae 6P18H1]
Length = 350
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 71/155 (45%), Gaps = 19/155 (12%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLAL 76
I W DLW+PE G++ M + REV L G S N+ N D++ A ++ L
Sbjct: 151 ITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIKTAYERLE-----KL 205
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
L N A F+S + G+V + + W+ A K ++ V PK GA W D +AI
Sbjct: 206 LPNVAT-FNSDSPEVPYVQGEVAIGMIWNGSAYLAQKENQSLQFVYPKEGAIFWMDNYAI 264
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA 171
P ++ V G H++I+F L+ A
Sbjct: 265 PTTAK--------NVEGA----HKFIDFLLRPENA 287
>gi|290893772|ref|ZP_06556752.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
J2-071]
gi|404407260|ref|YP_006689975.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes SLCC2376]
gi|290556721|gb|EFD90255.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
J2-071]
gi|404241409|emb|CBY62809.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Listeria monocytogenes SLCC2376]
Length = 357
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 109/245 (44%), Gaps = 37/245 (15%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN-SNNIDL 61
I Y K F N + W L+ PEL +I +++ REV+G L +G S N +N L
Sbjct: 143 IIYNKQMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLGYSLNDTNKAHL 199
Query: 62 QVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVA 119
Q A K+ ++ N+ A++ ++ +L + + + VAV +S + + ++
Sbjct: 200 QAARDKLETMTPNVKAIVGDEIKLLMADN--------EAGVAVTFSGEAAEMLSENEDLE 251
Query: 120 VVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVI 179
V+PK G++LW D IP + K I G H++I F L+ A E +
Sbjct: 252 YVIPKDGSNLWFDNMVIPKTA----KNIDGA--------HKFINFMLKPENA-AINAEYV 298
Query: 180 PGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
A+P+ E + LP+E+ S D P + L E + L + LS Y L
Sbjct: 299 GYATPN--EKAVQLLPKEI-----SSDERF---YPDMDELNNLEVYDNLGKRMLSYYNEL 348
Query: 240 VADLQ 244
+ +
Sbjct: 349 FLEFK 353
>gi|443700412|gb|ELT99374.1| hypothetical protein CAPTEDRAFT_95386, partial [Capitella teleta]
Length = 329
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 18/152 (11%)
Query: 3 IAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYN 55
I Y K+ K AP++ W + PE + ++ +++P EV+ SV+ Y+G +
Sbjct: 100 IGYNKAAVEKVLGKDAPVDSWALILEPENMKKLQKCGVAFLDAPSEVLPSVMTYLGIPGD 159
Query: 56 SNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM 115
S L++ K +V++ + +A ++S L GD+ VA+GWS D++ A R
Sbjct: 160 S----LKMGDYKKAVER-MKAVAPYITYYNSVRSLSDLANGDICVALGWSGDMMMARDRA 214
Query: 116 S------NVAVVVPKSGASLWADLWAIPAASR 141
++ VVPK GA +W D+ AIP S+
Sbjct: 215 KEANNGLDIRYVVPKEGAPMWFDMLAIPKDSK 246
>gi|398791267|ref|ZP_10552012.1| spermidine/putrescine-binding periplasmic protein [Pantoea sp.
YR343]
gi|398215321|gb|EJN01884.1| spermidine/putrescine-binding periplasmic protein [Pantoea sp.
YR343]
Length = 369
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 70/136 (51%), Gaps = 15/136 (11%)
Query: 17 PIEDWKDLWRPE----LAG-RISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQ 71
P++ W + +PE L G +S +++P E+ +VL Y+G NS++ +G +
Sbjct: 155 PLDSWDLVLKPENLEKLKGCGVSFLDAPEEIFATVLNYLGKDPNSSDAK-DYSGAATDL- 212
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
L L R F S+ Y+ G++ VA+GWS D+L A R ++ +VPK
Sbjct: 213 --LLKLRPNIRYFHSSQYINDLANGNICVAIGWSGDILQAKDRADKANNGVHLGYIVPKQ 270
Query: 126 GASLWADLWAIPAASR 141
GA + D++AIP ++
Sbjct: 271 GALAFFDMFAIPKDAK 286
>gi|145630323|ref|ZP_01786104.1| ribokinase [Haemophilus influenzae R3021]
gi|144984058|gb|EDJ91495.1| ribokinase [Haemophilus influenzae R3021]
Length = 350
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 71/155 (45%), Gaps = 19/155 (12%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLAL 76
I W DLW+PE G++ M + REV L G S N+ N D++ A ++ L
Sbjct: 151 ITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIKTAYERLE-----KL 205
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
L N A F+S + G+V + + W+ A K ++ V PK GA W D +AI
Sbjct: 206 LPNVAT-FNSDSPEVPYVQGEVAIGMIWNGSAYLAQKENQSLQFVYPKEGAIFWMDNYAI 264
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA 171
P ++ V G H++I+F L+ A
Sbjct: 265 PTTAK--------NVEGA----HKFIDFLLRPENA 287
>gi|145633546|ref|ZP_01789275.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae 3655]
gi|378696696|ref|YP_005178654.1| polyamine transporter subunit [Haemophilus influenzae 10810]
gi|144985915|gb|EDJ92523.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae 3655]
gi|301169215|emb|CBW28812.1| polyamine transporter subunit [Haemophilus influenzae 10810]
Length = 350
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 71/155 (45%), Gaps = 19/155 (12%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLAL 76
I W DLW+PE G++ M + REV L G S N+ N D++ A ++ L
Sbjct: 151 ITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIKTAYERLE-----KL 205
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
L N A F+S + G+V + + W+ A K ++ V PK GA W D +AI
Sbjct: 206 LPNVAT-FNSDSPEVPYVQGEVAIGMIWNGSAYLAQKENQSLQFVYPKEGAIFWMDNYAI 264
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA 171
P ++ V G H++I+F L+ A
Sbjct: 265 PTTAK--------NVEGA----HKFIDFLLRPENA 287
>gi|261213133|ref|ZP_05927417.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio sp. RC341]
gi|260838198|gb|EEX64875.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio sp. RC341]
Length = 344
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 94/222 (42%), Gaps = 32/222 (14%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALL 77
I W DLW + ++ +++ R+V G LK G S N+ N D ++ ++L L
Sbjct: 144 ITKWADLWDKQYEQQVMLIDDIRDVFGMALKLNGFSINTKNED-EIK----KAYESLVAL 198
Query: 78 ANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 137
N L++S + G+ + + W+ + M + V+P+ GA LW D + IP
Sbjct: 199 KNNVLLYNSDAPHVPYVSGEATLGMQWNGNAYQGQVEMPELKFVMPEEGAVLWMDNFTIP 258
Query: 138 AASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQ-EVIPG-ASPSALETTLVKLP 195
+ S PL H++I F LP Q E++ SA + LP
Sbjct: 259 SGST------------NIPLAHKFINFMY-----LPENQAEIVKSLGYASATKGGRAMLP 301
Query: 196 EELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
EL +D I P E + + EF+ + TL+ YE
Sbjct: 302 AEL------RDNPTI--FPSDEDMKKGEFINDVGSETLAIYE 335
>gi|145634502|ref|ZP_01790211.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae PittAA]
gi|145268047|gb|EDK08042.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae PittAA]
Length = 350
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 71/155 (45%), Gaps = 19/155 (12%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLAL 76
I W DLW+PE G++ M + REV L G S N+ N D++ A ++ L
Sbjct: 151 ITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIKTAYERLE-----KL 205
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
L N A F+S + G+V + + W+ A K ++ V PK GA W D +AI
Sbjct: 206 LPNVAT-FNSDSPEVPYVQGEVAIGMIWNGSAYLAQKENQSLQFVYPKEGAIFWMDNYAI 264
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA 171
P ++ V G H++I+F L+ A
Sbjct: 265 PTTAK--------NVEGA----HKFIDFLLRPENA 287
>gi|421587735|ref|ZP_16033100.1| extracellular solute-binding protein [Rhizobium sp. Pop5]
gi|403707696|gb|EJZ22629.1| extracellular solute-binding protein [Rhizobium sp. Pop5]
Length = 365
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 95/226 (42%), Gaps = 43/226 (19%)
Query: 20 DWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQN 73
+W L+ P A + I M++SP +VI SVL Y+G NS DL A Q+
Sbjct: 155 NWDALFDPAKAAKLKDCGIYMLDSPTDVIPSVLAYLGLDPNSKKPDDLNKA------QEV 208
Query: 74 LALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGA 127
L + R F S+ Y+ A GD+ +A+G+S DV A R + NV VP GA
Sbjct: 209 LLAVRPFVRKFHSSEYISALANGDICIALGFSGDVFQARDRAAEAKAGVNVDYSVPNQGA 268
Query: 128 SLWADLWAIPA-ASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSA 186
++ D++ IP A +E H +I + + K EV AS
Sbjct: 269 QIFFDVFGIPKDAPHVEEA-------------HAFINYMM--------KPEVAAKASNFV 307
Query: 187 LETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEAT 232
K ++ L DT + P EI+A+ + PL T
Sbjct: 308 FYANGNKASQQFLNKDVIDDTAIY---PTPEIMAKLFTVPPLDPKT 350
>gi|398871289|ref|ZP_10626605.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM74]
gi|398206544|gb|EJM93307.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM74]
Length = 365
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W L+ PE + ++ ++S E++ +VL YMG + NS N D + A +
Sbjct: 153 IDSWGVLFEPENIKKLHSCGVAFLDSADEMMPTVLNYMGLNANSTNPEDYKKA------E 206
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
+ L + F S+ Y+ GD+ VA+G+S D+ A R N+A +PK
Sbjct: 207 EKLLAVRPYVTYFHSSKYIADLANGDICVAIGFSGDIFQAKNRAEEAKKGVNIAYSIPKE 266
Query: 126 GASLWADLWAIPAAS 140
G +LW D+ AIP S
Sbjct: 267 GGALWFDMLAIPKDS 281
>gi|383814371|ref|ZP_09969792.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Serratia sp. M24T3]
gi|383296781|gb|EIC85094.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Serratia sp. M24T3]
Length = 368
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 84/189 (44%), Gaps = 23/189 (12%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + P+ + +S +++P E+ +VL Y+ NS + A +
Sbjct: 154 APVNSWDLVLNPDNLAKLKGCGVSFLDAPAEIYATVLNYLHLDPNSTKPEDYTAATDL-- 211
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VAVGW+ DV+ A R N+A +PK
Sbjct: 212 ---LLKLRPSIRYFHSSQYINDLANGDICVAVGWAGDVIQASNRAKEAKNGVNIAYSIPK 268
Query: 125 SGASLWADLWAIPAASRL--ETKQIGGRVRGPSPL--IHQWIEFCLQTARALPFKQEVI- 179
GA + D++A+PA ++ E Q + P + I + + A A P + I
Sbjct: 269 EGALAFFDVFAMPADAKNTDEAYQFLNYLMRPEVMAGISNAVFYASGNAAATPLVKPEIR 328
Query: 180 --PGASPSA 186
PG PSA
Sbjct: 329 NNPGIYPSA 337
>gi|148827692|ref|YP_001292445.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae PittGG]
gi|148718934|gb|ABR00062.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae PittGG]
Length = 350
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 71/155 (45%), Gaps = 19/155 (12%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLAL 76
I W DLW+PE G++ M + REV L G S N+ N D++ A ++ L
Sbjct: 151 ITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIKTAYERLE-----KL 205
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
L N A F+S + G+V + + W+ A K ++ V PK GA W D +AI
Sbjct: 206 LPNVAT-FNSDSPEVPYVQGEVAIGMIWNGSAYLAQKENQSLQFVYPKEGAIFWMDNYAI 264
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA 171
P ++ V G H++I+F L+ A
Sbjct: 265 PTTAK--------NVEGA----HKFIDFLLRPENA 287
>gi|378960182|ref|YP_005217668.1| Putrescine ABC transporter, periplasmic putrescine-binding protein
[Salmonella enterica subsp. enterica serovar Typhi str.
P-stx-12]
gi|374354054|gb|AEZ45815.1| Putrescine ABC transporter, periplasmic putrescine-binding protein
[Salmonella enterica subsp. enterica serovar Typhi str.
P-stx-12]
Length = 371
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 156 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL 214
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N++ +PK
Sbjct: 215 ---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPK 271
Query: 125 SGASLWADLWAIPAASR 141
G + D++A+PA ++
Sbjct: 272 EGVMAFFDVFAMPADAK 288
>gi|337267065|ref|YP_004611120.1| family 1 extracellular solute-binding protein [Mesorhizobium
opportunistum WSM2075]
gi|336027375|gb|AEH87026.1| extracellular solute-binding protein family 1 [Mesorhizobium
opportunistum WSM2075]
Length = 365
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 16/132 (12%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
I+ W + P+ + + +++SP ++I + LKY+G NS + D +A + ++ +
Sbjct: 153 IDSWDTFFNPDSLAKLKDCGVYVLDSPADIIPAALKYLGLDPNSTSPD-DIAKAEDALMK 211
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPA------VKRMSNVAVVVPKSG 126
+ R F S+ Y+ A GD+ +AVGWS DV A K+ + VPK G
Sbjct: 212 VRPFI----RKFHSSEYINALANGDICLAVGWSGDVFQARNRAVEAKQGVEIGYSVPKEG 267
Query: 127 ASLWADLWAIPA 138
A +W D AIPA
Sbjct: 268 AQMWFDQMAIPA 279
>gi|333367327|ref|ZP_08459603.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Psychrobacter sp.
1501(2011)]
gi|332978832|gb|EGK15515.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Psychrobacter sp.
1501(2011)]
Length = 386
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 101/232 (43%), Gaps = 37/232 (15%)
Query: 11 RKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMG---ASYNSNNIDLQVAGGK 67
++ +L+ I W DLW P+ GR+ ++N R+V L +G ++ + N+I
Sbjct: 177 KRIDLSSINSWDDLWLPQYKGRVMLMNDLRDVFSMSLLTLGYPTSTQDPNHIK------- 229
Query: 68 ISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR-MSNVAVVVPKSG 126
+ + LA L R F+S F G+ ++ + W+ +V+ A + M + V PK G
Sbjct: 230 -AAYEKLATLMPNVRTFNSDAPRMPFMEGETYLGLAWNGEVIMAQDQGMPELDFVYPKEG 288
Query: 127 ASLWADLWAIPA-ASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPS 185
+W D AIP A LE + +I+F ++ + +E+ G SPS
Sbjct: 289 VIMWMDNMAIPKNAKNLENA-------------YTFIDFLMRPENSAIISEEIGYG-SPS 334
Query: 186 ALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
L+ P + N + PPA+ + F + + T++ Y+
Sbjct: 335 DAARALM----------PPKMANNEIIYPPADKMGHALFRRDVGDKTMALYQ 376
>gi|15887954|ref|NP_353635.1| ABC transporter, substrate binding protein (putrescine)
[Agrobacterium fabrum str. C58]
gi|15155556|gb|AAK86420.1| ABC transporter, substrate binding protein (putrescine)
[Agrobacterium fabrum str. C58]
Length = 365
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 68/136 (50%), Gaps = 16/136 (11%)
Query: 17 PIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQ 71
P++ W L++PE A + I+++++ E + Y+G + +S AGG++
Sbjct: 152 PVDSWDVLFKPENAEKLKSCGINILDASDETFAIAMNYLGKNPDSKETADLEAGGEV--- 208
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
+ + + F+S+ Y+ GD +++GWS D+L A R V V+PK
Sbjct: 209 --YSKIRPYVKTFNSSPYINDLANGDTCISIGWSGDILQAKTRAEEAKNGVEVNYVIPKE 266
Query: 126 GASLWADLWAIPAASR 141
G +W D +AIPA ++
Sbjct: 267 GTYIWMDSFAIPADAK 282
>gi|403237367|ref|ZP_10915953.1| spermidine:putrescine ABC transporter [Bacillus sp. 10403023]
Length = 358
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 95/227 (41%), Gaps = 34/227 (14%)
Query: 21 WKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID--LQVAGGKISVQQNL-ALL 77
W DLW P L I V+ RE++G L +G S N N+D ++ I + N+ A++
Sbjct: 158 WNDLWDPSLKNEIIFVDGAREIMGMGLNSLGYSLNDTNLDHLMEAKDKLIKLTPNVKAIV 217
Query: 78 ANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 137
++ ++ + + + WS D + ++ VVP G++LW D IP
Sbjct: 218 GDEGKVLIQNR--------EAAIGIVWSGDAADIMWENEDLNYVVPSEGSNLWFDNMVIP 269
Query: 138 AASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEE 197
+ K I G HQ+I F L A E + ++P+ + L +PE+
Sbjct: 270 KTA----KNIDGA--------HQFINFMLDAEIAAQ-NTEYVSYSTPN--KEALQYMPED 314
Query: 198 LLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVADLQ 244
++ + P E+ + E E L + L+ Y L + +
Sbjct: 315 MVTDERF--------YPSPELTEKLEVYENLGKKNLAIYNQLFLEFK 353
>gi|376262419|ref|YP_005149139.1| spermidine/putrescine-binding periplasmic protein [Clostridium sp.
BNL1100]
gi|373946413|gb|AEY67334.1| spermidine/putrescine-binding periplasmic protein [Clostridium sp.
BNL1100]
Length = 349
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 103/236 (43%), Gaps = 35/236 (14%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNI-DL 61
I Y K+ ++ P+E W LW + +I M++S R+ IG LK +G S N+ N +L
Sbjct: 139 IIYNKTMVKE----PVESWNILWDKKYDKQIFMLDSQRDSIGVTLKKLGYSLNTKNKEEL 194
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ A ++ Q+++ QA + D G G +AV WS D + + ++
Sbjct: 195 EKAKNELIKQKDIV----QAYVGDEVKDKMIMGEG--ALAVVWSGDAVYMKSQNKDLEYA 248
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
+PK G++LW D IP+ ++ + + ++I F T AL + G
Sbjct: 249 IPKEGSNLWFDSMVIPSTAKHQKEA------------EEFINFMCDTEIALENTNYI--G 294
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
S E KL LLK I P E + CE L +A++ DY+
Sbjct: 295 YSTPQTEAKK-KLDPVLLKD--------IAAYPTDEQMKDCEVFIDL-DASIKDYD 340
>gi|145628878|ref|ZP_01784678.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae 22.1-21]
gi|144979348|gb|EDJ89034.1| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae 22.1-21]
Length = 350
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 71/155 (45%), Gaps = 19/155 (12%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLAL 76
I W DLW+PE G++ M + REV L G S N+ N D++ A ++ L
Sbjct: 151 ITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIKTAYERLE-----KL 205
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
L N A F+S + G+V + + W+ A K ++ V PK GA W D +AI
Sbjct: 206 LPNVAT-FNSDSPEVPYVQGEVAIGMIWNGSAYLAQKENQSLQFVYPKEGAIFWMDNYAI 264
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA 171
P ++ V G H++I+F L+ A
Sbjct: 265 PTTAK--------NVEGA----HKFIDFLLRPENA 287
>gi|30995379|ref|NP_438656.2| spermidine/putrescine ABC transporter periplasmic-binding protein
[Haemophilus influenzae Rd KW20]
gi|145638587|ref|ZP_01794196.1| predicted cytoplasmic sugar-binding protein [Haemophilus influenzae
PittII]
gi|260580439|ref|ZP_05848267.1| spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
influenzae RdAW]
gi|21431815|sp|P44731.2|POTD2_HAEIN RecName: Full=Spermidine/putrescine-binding periplasmic protein 2;
Short=SPBP; Flags: Precursor
gi|145272182|gb|EDK12090.1| predicted cytoplasmic sugar-binding protein [Haemophilus influenzae
PittII]
gi|260092781|gb|EEW76716.1| spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
influenzae RdAW]
gi|309750089|gb|ADO80073.1| Spermidine/putrescine ABC transporter, periplasmic-binding protein
[Haemophilus influenzae R2866]
Length = 350
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 71/155 (45%), Gaps = 19/155 (12%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLAL 76
I W DLW+PE G++ M + REV L G S N+ N D++ A ++ L
Sbjct: 151 ITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIKTAYERLE-----KL 205
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
L N A F+S + G+V + + W+ A K ++ V PK GA W D +AI
Sbjct: 206 LPNVAT-FNSDSPEVPYVQGEVAIGMIWNGSAYLAQKENQSLQFVYPKEGAIFWMDNYAI 264
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA 171
P ++ V G H++I+F L+ A
Sbjct: 265 PTTAK--------NVEGA----HKFIDFLLRPENA 287
>gi|308048910|ref|YP_003912476.1| extracellular solute-binding protein [Ferrimonas balearica DSM
9799]
gi|307631100|gb|ADN75402.1| extracellular solute-binding protein family 1 [Ferrimonas balearica
DSM 9799]
Length = 345
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 102/225 (45%), Gaps = 36/225 (16%)
Query: 16 APIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLA 75
A I WKDLW P+ + + N REV L+ G S NS + + ++Q
Sbjct: 142 ATITSWKDLWDPKWQRSLLLTNDVREVFHMALRINGHSGNSTDPE--------EIKQAYE 193
Query: 76 LLAN---QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWAD 132
LL + +F+S + F GDV + + W+ + A + + + PK GA+LW D
Sbjct: 194 LLRSLMPNVLVFNSDAPREPFLAGDVNLGMLWNGEAFMAQQEEEAIQYIYPKEGAALWVD 253
Query: 133 LWAIPA-ASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTL 191
+AIP A+ +E H++I+F ++ A+ E + +P+ ET +
Sbjct: 254 SFAIPVNAANVENA-------------HKFIDFMMRPEIAVQVV-EYLGYTTPN--ETAI 297
Query: 192 VKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDY 236
L E S++T + PP E++ + EF + + + L+ Y
Sbjct: 298 GMLDPEY-----SENTAIF---PPEEVVKQGEFQQDVGDEALAIY 334
>gi|335035434|ref|ZP_08528775.1| ABC transporter, substrate binding protein (putrescine)
[Agrobacterium sp. ATCC 31749]
gi|333793201|gb|EGL64557.1| ABC transporter, substrate binding protein (putrescine)
[Agrobacterium sp. ATCC 31749]
Length = 365
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 68/136 (50%), Gaps = 16/136 (11%)
Query: 17 PIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQ 71
P++ W L++PE A + I+++++ E + Y+G + +S AGG++
Sbjct: 152 PVDSWDVLFKPENAEKLKSCGINVLDASDETFAIAMNYLGKNPDSKETADLEAGGEV--- 208
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
+ + + F+S+ Y+ GD +++GWS D+L A R V V+PK
Sbjct: 209 --YSKIRPYVKTFNSSPYINDLANGDTCISIGWSGDILQAKTRAEEAKNGVEVNYVIPKE 266
Query: 126 GASLWADLWAIPAASR 141
G +W D +AIPA ++
Sbjct: 267 GTYIWMDSFAIPADAK 282
>gi|315281477|ref|ZP_07870095.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
marthii FSL S4-120]
gi|313614877|gb|EFR88403.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
marthii FSL S4-120]
Length = 357
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 108/245 (44%), Gaps = 37/245 (15%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN-SNNIDL 61
I Y K F N + W L+ PEL +I +++ REV+G L +G S N +N L
Sbjct: 143 IIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLGYSLNDTNKAHL 199
Query: 62 QVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVA 119
Q A K+ ++ N+ A++ ++ +L + + + VAV +S + + ++
Sbjct: 200 QAARDKLETMTPNVKAIVGDEIKLLMADN--------EAGVAVTFSGEAAEMLSENEDLE 251
Query: 120 VVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVI 179
V+PK G++LW D IP + K + G H++I F L+ A E +
Sbjct: 252 YVIPKDGSNLWFDNMVIPKTA----KNVDGA--------HKFINFMLKPENA-AINAEYV 298
Query: 180 PGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
A+P+A L LP+E+ S D P L E + L + LS Y L
Sbjct: 299 GYATPNAKAVQL--LPKEI-----SSDERF---YPDMNELNNLEVYDNLGKRMLSYYNEL 348
Query: 240 VADLQ 244
+ +
Sbjct: 349 FLEFK 353
>gi|163800915|ref|ZP_02194815.1| spermidine/putrescine ABC transporter membrane protein [Vibrio sp.
AND4]
gi|159175264|gb|EDP60061.1| spermidine/putrescine ABC transporter membrane protein [Vibrio sp.
AND4]
Length = 345
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 96/216 (44%), Gaps = 28/216 (12%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALL 77
I W D W + G++ +++ REV L +G S N+ N D A + L L
Sbjct: 145 ITKWDDFWDSKWEGQLMLMDDSREVFHIALTKLGFSPNTTNPDEIKAA-----YEELKKL 199
Query: 78 ANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 137
+F+S + G+V + + W+ A K +N+ V+ P+ GA W D AIP
Sbjct: 200 MPNVLVFNSDFPANPYLAGEVSLGMLWNGSAYMARKEGANIDVIWPEKGAIFWMDSLAIP 259
Query: 138 AASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEE 197
A + K + H+ I+F L+ A E+ P+ +++ L LP+E
Sbjct: 260 AGA----KNVDAA--------HKMIDFLLRPENAAKIALEI---GYPTPVKSALKLLPKE 304
Query: 198 LLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATL 233
++DT++ PP E++ + + + EA++
Sbjct: 305 F-----AEDTSIF---PPQEVMDSGTWQDEVGEASV 332
>gi|404370601|ref|ZP_10975922.1| hypothetical protein CSBG_02094 [Clostridium sp. 7_2_43FAA]
gi|226913267|gb|EEH98468.1| hypothetical protein CSBG_02094 [Clostridium sp. 7_2_43FAA]
Length = 350
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 32/222 (14%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLAL 76
++ W +W + +I ++++ R+ IG LK +G S N+ N +L+ A + Q+ L L
Sbjct: 149 VDSWDIMWNEKYKKQIFVLDAQRDAIGMALKKLGYSLNTTNEKELEEAKNLLIEQKPLVL 208
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
+ D G+ +A+ WS + L N+ V+PK GA+ W D WAI
Sbjct: 209 KYGADEVKD------LMTSGEASIAMIWSGEGLTLADENENLEYVIPKEGANYWLDSWAI 262
Query: 137 PA-ASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLP 195
PA A+ ET + ++I F A +E I +P+ L + + P
Sbjct: 263 PANANDKETAE-------------KFINFVSGKDNAYKIAEE-IGYTTPNKL--AMEEQP 306
Query: 196 EELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
EE+ + + P EI+ +CE + L + L YE
Sbjct: 307 EEVKNNEGA--------YMPKEIMEKCEVYKYLPQEKLRLYE 340
>gi|311105182|ref|YP_003978035.1| putrescine-binding periplasmic protein [Achromobacter xylosoxidans
A8]
gi|310759871|gb|ADP15320.1| putrescine-binding periplasmic protein [Achromobacter xylosoxidans
A8]
Length = 367
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 16/131 (12%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
+ +W +++PE A + ISM++ +V +VLKY+G NS N D A ++
Sbjct: 155 LANWDMIFKPENAAKLKECGISMLDEAAQVFPAVLKYLGKDPNSTNADDYKAALEV---- 210
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSG 126
L + R F S+ Y+ +GD+ + G+S DV+ A KR + V +PK G
Sbjct: 211 -LMKIRPYIRQFSSSGYIDELAVGDLCMVYGFSGDVMIARKRAQDAKKAYEVNYFIPKGG 269
Query: 127 ASLWADLWAIP 137
A W DL IP
Sbjct: 270 APAWFDLMVIP 280
>gi|77459054|ref|YP_348560.1| extracellular solute-binding protein [Pseudomonas fluorescens
Pf0-1]
gi|77383057|gb|ABA74570.1| putrescine ABC transporter, substrate-binding protein [Pseudomonas
fluorescens Pf0-1]
Length = 362
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 64/133 (48%), Gaps = 18/133 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W L+ PE + +SM++S EV ++L YMG S D + A +
Sbjct: 150 IDSWAVLFEPENLKKLTQCGVSMMDSADEVFPAILNYMGMDPRSEKPEDYKKA------E 203
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
+ L + F S+ Y+ GD+ VA G+S DV A R N+A +PK
Sbjct: 204 EKLLSIRPYITYFHSSKYVSDLANGDICVAFGYSGDVFRAANRAKEAKNGVNIAYSIPKE 263
Query: 126 GASLWADLWAIPA 138
GA+LW DL AIPA
Sbjct: 264 GANLWFDLLAIPA 276
>gi|261821238|ref|YP_003259344.1| putrescine ABC transporter periplasmic-binding protein
[Pectobacterium wasabiae WPP163]
gi|261605251|gb|ACX87737.1| extracellular solute-binding protein family 1 [Pectobacterium
wasabiae WPP163]
Length = 369
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P E+ +VL Y G NS + S
Sbjct: 154 APVDSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYQGKDPNST----KPGDYSTSA 209
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VAVGW+ D++ A R N+ +PK
Sbjct: 210 TDLLLKLRPSIRYFHSSQYINDLANGDICVAVGWAGDIMQAGNRAKEAKNGVNIQYSIPK 269
Query: 125 SGASLWADLWAIPAASR 141
GA + D+ AIP ++
Sbjct: 270 EGALAFFDVLAIPKDAK 286
>gi|322514242|ref|ZP_08067303.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Actinobacillus ureae ATCC
25976]
gi|322119854|gb|EFX91868.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Actinobacillus ureae ATCC
25976]
Length = 360
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 30/212 (14%)
Query: 21 WKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQ 80
W DLW+PE A ++ +++ REV L +G + N+ N + A + L L +
Sbjct: 163 WGDLWKPEFANKVQLLDDAREVFNIALLKLGKNPNTTNPEEIKAA-----YEELKKLRSN 217
Query: 81 ARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 140
F S + +F G+V V W+ V A K + V +V PK G LW D AIPA +
Sbjct: 218 VLSFTSDNPANSFIAGEVSVGQLWNGSVRIAKKEQAPVNMVFPKEGPVLWVDTLAIPANA 277
Query: 141 RLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEV-IPGASPSALETTLVKLPEELL 199
+ + H+ I + L A E+ P ++ AL+T LP+E+
Sbjct: 278 KNKEN------------AHKLINYLLSAPVAEKLTLEIGYPTSNVEALKT----LPKEI- 320
Query: 200 KGKPSQDTNLIVGVPPAEILARCEFLEPLSEA 231
++D + P AE+L ++ + + +A
Sbjct: 321 ----TEDPAI---YPTAEVLKAAQWQDDVGDA 345
>gi|16759787|ref|NP_455404.1| putrescine ABC transporter periplasmic-binding protein [Salmonella
enterica subsp. enterica serovar Typhi str. CT18]
gi|29142440|ref|NP_805782.1| putrescine ABC transporter periplasmic-binding protein [Salmonella
enterica subsp. enterica serovar Typhi str. Ty2]
gi|213855242|ref|ZP_03383482.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|289825027|ref|ZP_06544390.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|25358046|pir||AB0606 putrescine-binding periplasmic protein precursor [imported] -
Salmonella enterica subsp. enterica serovar Typhi
(strain CT18)
gi|16502080|emb|CAD05316.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Typhi]
gi|29138070|gb|AAO69631.1| putrescine-binding periplasmic protein precursor [Salmonella
enterica subsp. enterica serovar Typhi str. Ty2]
Length = 370
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 155 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N++ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
G + D++A+PA ++
Sbjct: 271 EGVMAFFDVFAMPADAK 287
>gi|354722725|ref|ZP_09036940.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Enterobacter mori LMG 25706]
Length = 370
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 19/156 (12%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
++ W + +PE + +S +++P E+ +VL Y+G NSN A
Sbjct: 157 LDSWDVVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSNK-----ANDYTGPAT 211
Query: 73 NLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
+L L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK
Sbjct: 212 DLLLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKE 271
Query: 126 GASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH 159
GA + D++A+P A ++ E Q + P + H
Sbjct: 272 GALAFFDVFAMPADAKNKDEAYQFLNYLMRPDVIAH 307
>gi|429210720|ref|ZP_19201886.1| extracellular solute-binding protein [Pseudomonas sp. M1]
gi|428158134|gb|EKX04681.1| extracellular solute-binding protein [Pseudomonas sp. M1]
Length = 365
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 65/132 (49%), Gaps = 18/132 (13%)
Query: 18 IEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W L+ PE ++S ++S E++ +VLKY+G NS N D + A K
Sbjct: 153 IDSWAVLFEPENMKKLSQCGVAFLDSGDEMMPAVLKYLGLDPNSTNPADYEKAEAK---- 208
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
L + F S+ Y+ G++ VA G+S DV A R N+A +PK
Sbjct: 209 --LMAVRPYVTYFHSSKYISDLANGNICVAAGFSGDVFQAANRAKEAGKGVNIAYAIPKE 266
Query: 126 GASLWADLWAIP 137
GA+LW D+ AIP
Sbjct: 267 GANLWFDILAIP 278
>gi|319782139|ref|YP_004141615.1| family 1 extracellular solute-binding protein [Mesorhizobium ciceri
biovar biserrulae WSM1271]
gi|317168027|gb|ADV11565.1| extracellular solute-binding protein family 1 [Mesorhizobium ciceri
biovar biserrulae WSM1271]
Length = 365
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 16/132 (12%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
I+ W + P+ + + +++SP ++I + LKY+G NS + D +A ++
Sbjct: 153 IDSWDVFFNPDSLAKLKDCGVYVLDSPADIIPAALKYLGLDPNSTSPD-DIA----KAEE 207
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPA------VKRMSNVAVVVPKSG 126
L + R F S+ Y+ A GD+ +AVGWS DV A K+ + VPK G
Sbjct: 208 TLLKVRPYIRKFHSSEYINALANGDICLAVGWSGDVFQARNRAVEAKQGVEIGYSVPKEG 267
Query: 127 ASLWADLWAIPA 138
A +W D AIPA
Sbjct: 268 AQMWFDQMAIPA 279
>gi|170717788|ref|YP_001784852.1| extracellular solute-binding protein [Haemophilus somnus 2336]
gi|168825917|gb|ACA31288.1| extracellular solute-binding protein family 1 [Haemophilus somnus
2336]
Length = 348
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 32/221 (14%)
Query: 13 HNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
N ++ W DLW PE A ++ M++ PRE+ L MG N N D +V Q
Sbjct: 143 QNPEQLQSWGDLWNPEFANKLQMLDDPRELFNIALLKMGE--NPNTQDPKVIE---KAYQ 197
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWAD 132
L L +F+S + F G+ V + W+ + A + +V PK G LW D
Sbjct: 198 ELLKLRPNILVFNSDNPANTFITGETDVGLIWNGSIRVAQNAGVPIKIVYPKEGTMLWID 257
Query: 133 LWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEV-IPGASPSALETTL 191
AIPA ++ V LI+ + L + E+ P ++ +ALE
Sbjct: 258 NLAIPATAK--------NVESAYKLIN----YLLSADVSEKLTLEIGYPTSNLNALE--- 302
Query: 192 VKLPEELLKGKPSQDTNLIVGV-PPAEILARCEFLEPLSEA 231
+LP+EL + K G+ P E+L R ++ + EA
Sbjct: 303 -RLPKELTENK---------GIFLPQEVLDRSQWQVDVGEA 333
>gi|386847569|ref|YP_006265582.1| Spermidine/putrescine-binding periplasmic protein [Actinoplanes sp.
SE50/110]
gi|359835073|gb|AEV83514.1| Spermidine/putrescine-binding periplasmic protein [Actinoplanes sp.
SE50/110]
Length = 416
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 10/137 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGAS-YNSNNIDL 61
IAY K + I DLW P+ G++ M++ E+ L G SN D
Sbjct: 187 IAYDPKKTGRE----ITSLADLWDPKFKGKVGMMSDSTELANFGLLAAGVKPGESNEADW 242
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPA-VKRMSNVAV 120
+ A K+ Q++ ++ R + Y+ A G G+VW+ WS DV + +N+
Sbjct: 243 RKAAAKLKQQRDAGIV----RKYYEQDYVDALGKGEVWLTQAWSGDVFQKNLSDGTNLKF 298
Query: 121 VVPKSGASLWADLWAIP 137
V+P+ G ++W D +AIP
Sbjct: 299 VIPQEGGTIWTDNFAIP 315
>gi|229522680|ref|ZP_04412096.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae TM 11079-80]
gi|419836822|ref|ZP_14360262.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-46B1]
gi|421343638|ref|ZP_15794042.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-43B1]
gi|421355443|ref|ZP_15805774.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-45]
gi|423736933|ref|ZP_17710051.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-41B1]
gi|424011196|ref|ZP_17754068.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-44C1]
gi|229340665|gb|EEO05671.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae TM 11079-80]
gi|395942205|gb|EJH52882.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-43B1]
gi|395950113|gb|EJH60732.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-45]
gi|408625281|gb|EKK98195.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-41B1]
gi|408854981|gb|EKL94722.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-44C1]
gi|408857372|gb|EKL97060.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-46B1]
Length = 343
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 92/220 (41%), Gaps = 28/220 (12%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALL 77
I W DLW + ++ +++ R+V G LK G S N+ N + ++ ++L L
Sbjct: 143 ITKWADLWDKQYEQQVMLIDDIRDVFGMALKLNGFSINTKN-EEEIK----KAYESLVAL 197
Query: 78 ANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 137
L++S + G+V + + W+ + M + V+P+ GA LW D + IP
Sbjct: 198 KKNVLLYNSDAPHVPYVSGEVTLGMQWNGNAYQGQVEMPELKFVMPEEGAVLWMDNFTIP 257
Query: 138 AASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEE 197
+ S+ PL H++I F Q Q + SA + LP E
Sbjct: 258 SGSK------------NIPLAHKFINFMYQPENQAEIVQSL---GYASATKGGRALLPAE 302
Query: 198 LLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
L +D I P E + + EF+ + TL+ YE
Sbjct: 303 L------RDNPTI--FPSDEDMKKGEFINDVGPETLAIYE 334
>gi|217965101|ref|YP_002350779.1| spermidine/putrescine ABC transporter substrate-binding protein
[Listeria monocytogenes HCC23]
gi|386007529|ref|YP_005925807.1| spermidine/putrescine ABC transporter (substrate-binding protein)
[Listeria monocytogenes L99]
gi|386026122|ref|YP_005946898.1| putative spermidine/putrescine uptake ABC transporter, substrate
binding protein [Listeria monocytogenes M7]
gi|217334371|gb|ACK40165.1| ABC transporter spermidine/putrescine binding protein [Listeria
monocytogenes HCC23]
gi|307570339|emb|CAR83518.1| spermidine/putrescine ABC transporter (substrate-binding protein)
[Listeria monocytogenes L99]
gi|336022703|gb|AEH91840.1| putative spermidine/putrescine uptake ABC transporter, substrate
binding protein [Listeria monocytogenes M7]
Length = 357
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 109/245 (44%), Gaps = 37/245 (15%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN-SNNIDL 61
I Y K F N + W L+ PEL +I +++ REV+G L +G S N +N L
Sbjct: 143 IIYNKEMFPNKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLGYSLNDTNKAHL 199
Query: 62 QVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVA 119
Q A K+ ++ N+ A++ ++ +L + + + VAV +S + + ++
Sbjct: 200 QAARDKLETMTPNVKAIVGDEIKLLMADN--------EAGVAVTFSGEAAEMLSENEDLE 251
Query: 120 VVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVI 179
V+PK G++LW D IP + K + G H++I F L+ A E +
Sbjct: 252 YVIPKDGSNLWFDNMVIPKTA----KNVDGA--------HKFINFMLKPENA-AINAEYV 298
Query: 180 PGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
A+P+ E + LP+E+ S D P + L E + L + LS Y L
Sbjct: 299 GYATPN--EKAVQLLPKEI-----SSDERF---YPDMDELNNLEVYDNLGKRMLSYYNEL 348
Query: 240 VADLQ 244
+ +
Sbjct: 349 FLEFK 353
>gi|308048856|ref|YP_003912422.1| extracellular solute-binding protein [Ferrimonas balearica DSM
9799]
gi|307631046|gb|ADN75348.1| extracellular solute-binding protein family 1 [Ferrimonas balearica
DSM 9799]
Length = 364
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 68/135 (50%), Gaps = 17/135 (12%)
Query: 18 IEDWKDLWRPELAGRI----SMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQ 72
+ W +++PE+ +I + +N+P E+I + + Y+G NS N D++ A ++
Sbjct: 153 VNSWDLVFKPEMISKIDCGVAFLNAPSEIIPAAMHYLGMDPNSTNPKDVEPA------EE 206
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSG 126
L + F S+ ++ GD+ +AVGWS D+L A R + V+P+ G
Sbjct: 207 LLLKVRPYITYFHSSQFINDLANGDICLAVGWSGDILQAADRADEADNGITIEYVIPQEG 266
Query: 127 ASLWADLWAIPAASR 141
+W DL AIP +R
Sbjct: 267 TLVWFDLMAIPRDAR 281
>gi|113461191|ref|YP_719260.1| spermidine/putrescine-binding periplasmic protein [Haemophilus
somnus 129PT]
gi|112823234|gb|ABI25323.1| spermidine/putrescine-binding periplasmic protein [Haemophilus
somnus 129PT]
Length = 345
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 93/221 (42%), Gaps = 30/221 (13%)
Query: 12 KHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQ 71
N ++ W DLW PE A ++ M++ PRE+ L MG N N D +V
Sbjct: 139 NQNPEHLQSWGDLWNPEFANKLQMLDDPRELFNIALLKMGE--NPNTQDPKVIE---KAY 193
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWA 131
Q L L +F+S + F G+ V + W+ + A + +V PK G LW
Sbjct: 194 QELLKLRPNILVFNSDNPANTFITGETDVGLIWNGSIRVAQNAGVPIKIVYPKEGTMLWI 253
Query: 132 DLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTL 191
D AIPA ++ V LI+ + + L P ++ +ALE
Sbjct: 254 DNLAIPATAK--------NVESAYKLINYLLSADVSETLTLEIG---YPTSNLNALE--- 299
Query: 192 VKLPEELLKGKPSQDTNLIVGV-PPAEILARCEFLEPLSEA 231
+LP+EL + K G+ P E+L R ++ + EA
Sbjct: 300 -RLPKELTENK---------GIFLPQEVLDRSQWQVDVGEA 330
>gi|385871473|gb|AFI89993.1| Putrescine ABC transporter, periplasmic putrescine-binding protein
[Pectobacterium sp. SCC3193]
Length = 369
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P E+ +VL Y G NS + S
Sbjct: 154 APVDSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYQGKDPNST----KPGDYSTSA 209
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VAVGW+ D++ A R N+ +PK
Sbjct: 210 TDLLLKLRPSIRYFHSSQYINDLANGDICVAVGWAGDIMQAGNRAKEAKNGVNIQYSIPK 269
Query: 125 SGASLWADLWAIPAASR 141
GA + D+ AIP ++
Sbjct: 270 EGALAFFDVLAIPKDAK 286
>gi|218295620|ref|ZP_03496416.1| extracellular solute-binding protein family 1 [Thermus aquaticus
Y51MC23]
gi|218243779|gb|EED10306.1| extracellular solute-binding protein family 1 [Thermus aquaticus
Y51MC23]
Length = 345
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 110/242 (45%), Gaps = 41/242 (16%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPEL-AGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
+AY++ R P++ + L+ P+ G +++ RE IG+ LKY+G S N+ + +
Sbjct: 133 LAYREDLVR----GPVDSYAVLFDPKAQVGPFLLLDEMRETIGAALKYLGYSVNATDPEA 188
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFG---IGDVWVAVGWSSDVLPAVKRMSNV 118
++ L+A +AR ++A GD V++ +S D+L A + + +
Sbjct: 189 LEKAKEL-------LIAAKARSVGFAGGVEALNRILAGDAAVSLAYSGDLLQARQEDARL 241
Query: 119 AVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPS-PLIHQWIEFCLQTARALPFKQE 177
V+PK G ++W D + RGPS L +++I+F L+ A
Sbjct: 242 RYVIPKEGGTIWTDALVV-------------LKRGPSQDLAYRFIDFLLRPENAAELAA- 287
Query: 178 VIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLS-EATLSDY 236
A+P A L LPEE+ QD + PP E+ AR E+L+ L E L D
Sbjct: 288 YTRYATPVAQAIPL--LPEEM-----RQDPAVF---PPEEVRARLEYLKDLGPEIALYDR 337
Query: 237 EW 238
W
Sbjct: 338 VW 339
>gi|421078994|ref|ZP_15539939.1| Putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Pectobacterium wasabiae CFBP 3304]
gi|401706181|gb|EJS96359.1| Putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Pectobacterium wasabiae CFBP 3304]
Length = 369
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W + +PE + +S +++P E+ +VL Y G NS + S
Sbjct: 154 APVDSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYQGKDPNST----KPGDYSTSA 209
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD+ VAVGW+ D++ A R N+ +PK
Sbjct: 210 TDLLLKLRPSIRYFHSSQYINDLANGDICVAVGWAGDIMQAGNRAKEAKNGVNIQYSIPK 269
Query: 125 SGASLWADLWAIPAASR 141
GA + D+ AIP ++
Sbjct: 270 EGALAFFDVLAIPKDAK 286
>gi|260772830|ref|ZP_05881746.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio metschnikovii CIP 69.14]
gi|260611969|gb|EEX37172.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio metschnikovii CIP 69.14]
Length = 345
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 28/216 (12%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALL 77
+ +W DLW + G++ +++ REV L +G S NS N + A Q L L
Sbjct: 146 LTNWNDLWDAKWRGQLMLMDDAREVFHMALSKLGYSPNSTNPEEIEAA-----YQELTKL 200
Query: 78 ANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 137
+F+S F G+V + + W+ A + +N+ ++ P+ GA W D AIP
Sbjct: 201 MPNVLVFNSDFPANPFLAGEVSLGMLWNGSAYMARQEGANIEIIWPEKGAIFWMDSIAIP 260
Query: 138 AASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEE 197
A + K I H+ I+F L+ A E+ P+ ++T LP E
Sbjct: 261 AGA----KNIEAA--------HKMIDFLLRPENAAKIALEI---GYPTPVKTAHKLLPAE 305
Query: 198 LLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATL 233
+ D N+ PP ++ E+ + + EA++
Sbjct: 306 FV-----NDPNIF---PPQSVMESGEWQDDVGEASI 333
>gi|404378409|ref|ZP_10983503.1| hypothetical protein HMPREF9021_00368 [Simonsiella muelleri ATCC
29453]
gi|294484281|gb|EFG31964.1| hypothetical protein HMPREF9021_00368 [Simonsiella muelleri ATCC
29453]
Length = 381
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 41/229 (17%)
Query: 17 PIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNS-NNIDLQVAGGKISV 70
P W +++PE + IS +SP E I VLKY+G + NS N D+Q A
Sbjct: 168 PENTWDLVFKPEYTNKLKSCGISFFDSPTEQIPLVLKYLGKNPNSENEADIQAAFDL--- 224
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L + + + + S+ Y+ GD+ V++G+ D+ A +R N+ V+ PK
Sbjct: 225 ---LKTVHHDVKRYTSSGYIDNLAKGDLCVSIGYGGDLNIAKRRAKEAGNQVNIDVLTPK 281
Query: 125 SGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASP 184
+G +W D + IP + K + H++I + L+ A V +P
Sbjct: 282 TGVGIWIDSFMIPK----DAKNVANA--------HKYINYTLEPKVAAQNGDFVT--YAP 327
Query: 185 SALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATL 233
+A + EL+K + SQD ++ P E+ A + P S A +
Sbjct: 328 AATQA------RELMKPEFSQDASIF---PSEEVKANSFVVLPKSPAVV 367
>gi|114331324|ref|YP_747546.1| extracellular solute-binding protein [Nitrosomonas eutropha C91]
gi|114308338|gb|ABI59581.1| extracellular solute-binding protein, family 1 [Nitrosomonas
eutropha C91]
Length = 369
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 89/180 (49%), Gaps = 36/180 (20%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPE----LAGRISMVNSPREVIGSVLKYMGASYNSN 57
+I + + K + NL P + W ++ PE + GRI++++S RE++ + LKY+G Y+++
Sbjct: 144 LIGFNREKLAELNL-PTDSWAIIFEPEYLKKIKGRITVLDSQRELMAAALKYLG--YSAS 200
Query: 58 NIDLQVAGGKISVQQNLALLANQA---RLFDSTHYLKAFGIGDVWVAVGWSSDVLPA--- 111
+ D + QQ AL+ F +T Y++ IG++WVA G+S+D+ A
Sbjct: 201 DTD------ENHWQQAKALIIRAKPYWAAFSNTSYIRELAIGNLWVAHGYSNDMYQAALD 254
Query: 112 ---VKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSP-LIHQWIEFCLQ 167
R +V V+P+ GA L D + + G P L H++I F L+
Sbjct: 255 AKKTGRRFSVDFVIPREGAVLSLDSMVLHHS-------------GHRPDLAHRFINFMLE 301
>gi|325271715|ref|ZP_08138201.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas sp. TJI-51]
gi|324103150|gb|EGC00511.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas sp. TJI-51]
Length = 364
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 16/135 (11%)
Query: 18 IEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
I+ W L+ PE ++S ++S E++ +VL YMG + NS N +Q
Sbjct: 152 IDSWAVLFEPENMKKLSKCGVAFLDSADEMLPAVLNYMGLNPNSTN-----PKDYAKAEQ 206
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPA------VKRMSNVAVVVPKSG 126
L + F S+ Y+ GD+ VA G+S DV A K+ N+A +PK G
Sbjct: 207 KLLAVRPYVTYFHSSKYITDLANGDICVAAGFSGDVFQAKARAEEAKKGVNLAYAIPKEG 266
Query: 127 ASLWADLWAIPAASR 141
+LW D+ AIP ++
Sbjct: 267 GNLWFDVLAIPKDAK 281
>gi|47093931|ref|ZP_00231669.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes str. 4b H7858]
gi|417314873|ref|ZP_12101566.1| extracellular solute-binding protein family 1 [Listeria
monocytogenes J1816]
gi|422412245|ref|ZP_16489204.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
innocua FSL S4-378]
gi|422415289|ref|ZP_16492246.1| spermidine/putrescine-binding periplasmic protein PotD [Listeria
innocua FSL J1-023]
gi|422808896|ref|ZP_16857307.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Listeria monocytogenes FSL J1-208]
gi|47017691|gb|EAL08486.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Listeria
monocytogenes str. 4b H7858]
gi|313619899|gb|EFR91458.1| spermidine/putrescine-binding periplasmic protein 2 [Listeria
innocua FSL S4-378]
gi|313624594|gb|EFR94576.1| spermidine/putrescine-binding periplasmic protein PotD [Listeria
innocua FSL J1-023]
gi|328467360|gb|EGF38440.1| extracellular solute-binding protein family 1 [Listeria
monocytogenes J1816]
gi|378752510|gb|EHY63095.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Listeria monocytogenes FSL J1-208]
Length = 357
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 109/245 (44%), Gaps = 37/245 (15%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN-SNNIDL 61
I Y K F N + W L+ PEL +I +++ REV+G L +G S N +N L
Sbjct: 143 IIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLGYSLNDTNKAHL 199
Query: 62 QVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVA 119
Q A K+ ++ N+ A++ ++ +L + + + VAV +S + + ++
Sbjct: 200 QAARDKLETMTPNVKAIVGDEIKLLMADN--------EAGVAVTFSGEAAEMLSENEDLE 251
Query: 120 VVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVI 179
V+PK G++LW D IP + K + G H++I F L+ A E +
Sbjct: 252 YVIPKDGSNLWFDNMVIPKTA----KNVDGA--------HKFINFMLKPENA-AINAEYV 298
Query: 180 PGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
A+P+ E + LP+E+ S D P + L E + L + LS Y L
Sbjct: 299 GYATPN--EKAVKLLPKEI-----SSDERF---YPDMDELNNLEVYDNLGKRMLSYYNEL 348
Query: 240 VADLQ 244
+ +
Sbjct: 349 FLEFK 353
>gi|170747368|ref|YP_001753628.1| extracellular solute-binding protein [Methylobacterium
radiotolerans JCM 2831]
gi|170653890|gb|ACB22945.1| extracellular solute-binding protein family 1 [Methylobacterium
radiotolerans JCM 2831]
Length = 375
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 66/133 (49%), Gaps = 16/133 (12%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
A + W + P A + I M++SP ++I S+L GA +S D V
Sbjct: 161 ATVNSWSVVLNPASANKLKECGIMMLDSPEDLIPSMLPAFGAKADSKRWDDMTL-----V 215
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L + R F S+ Y++A GD+ +AVG+S D++ A +R ++A VVPK
Sbjct: 216 TDALYKVRGAVRKFHSSEYIQALANGDICLAVGYSGDIMQAKRRAEEAKNGIDIAYVVPK 275
Query: 125 SGASLWADLWAIP 137
GA +W D +AIP
Sbjct: 276 EGALMWFDTFAIP 288
>gi|418825311|ref|ZP_13380614.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
gi|392816284|gb|EJA72213.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
Length = 325
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+ NS+ D G +
Sbjct: 110 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLDKDPNSSKAD-DYTGPATDL 168
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N++ +PK
Sbjct: 169 ---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPK 225
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 226 EGAMAFFDVFAMPADAK 242
>gi|295096449|emb|CBK85539.1| Spermidine/putrescine-binding periplasmic protein [Enterobacter
cloacae subsp. cloacae NCTC 9394]
Length = 370
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 17/155 (10%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
++ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 157 LDSWDVVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL-- 213
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSG 126
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK G
Sbjct: 214 -LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEG 272
Query: 127 ASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH 159
A + D++A+P A ++ E Q + P + H
Sbjct: 273 ALAFFDVFAMPADAKNKEEAYQFLNYLMRPEVIAH 307
>gi|345298511|ref|YP_004827869.1| family 1 extracellular solute-binding protein [Enterobacter
asburiae LF7a]
gi|345092448|gb|AEN64084.1| extracellular solute-binding protein family 1 [Enterobacter
asburiae LF7a]
Length = 370
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 17/155 (10%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
++ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 157 LDSWDVVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL-- 213
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSG 126
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK G
Sbjct: 214 -LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEG 272
Query: 127 ASLWADLWAIP--AASRLETKQIGGRVRGPSPLIH 159
A + D++A+P A ++ E Q + P + H
Sbjct: 273 ALAFFDVFAMPADAKNKDEAYQFLNYLMRPDVIAH 307
>gi|148550287|ref|YP_001270389.1| extracellular solute-binding protein [Pseudomonas putida F1]
gi|148514345|gb|ABQ81205.1| extracellular solute-binding protein, family 1 [Pseudomonas putida
F1]
Length = 364
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 16/135 (11%)
Query: 18 IEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
I+ W L+ PE ++S ++S E++ +VL YMG + NS + + +Q
Sbjct: 152 IDSWAVLFEPENMKKLSKCGVAFLDSADEMLPAVLNYMGLNPNSTD-----PKDYVKAEQ 206
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPA------VKRMSNVAVVVPKSG 126
L + F S+ Y+ GD+ VA G+S DV A K+ N+A +PK G
Sbjct: 207 KLLAVRPYVTYFHSSKYITDLANGDICVAAGFSGDVFQAKARAEEAKKGVNLAYAIPKEG 266
Query: 127 ASLWADLWAIPAASR 141
+LW D+ AIP ++
Sbjct: 267 GNLWFDVLAIPKDAK 281
>gi|152979401|ref|YP_001345030.1| extracellular solute-binding protein [Actinobacillus succinogenes
130Z]
gi|150841124|gb|ABR75095.1| extracellular solute-binding protein family 1 [Actinobacillus
succinogenes 130Z]
Length = 363
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 98/231 (42%), Gaps = 37/231 (16%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDL 61
V YK S F W DLW+PE AG++ +++ REV L +G + N+ N D
Sbjct: 154 VNTYKGSDFTS--------WGDLWKPEYAGKVQLLDDAREVFNIALVKLGFNPNTTNPDE 205
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN-VAV 120
K + ++ L L N F+S + +F G+V + W+ V A K N + +
Sbjct: 206 I----KAAYEELLKLRPNVLS-FNSDNPANSFIAGEVELGQLWNGSVRIAKKDAPNTIDM 260
Query: 121 VVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIP 180
V PK G LW D AIPA + P H+ I + L A E+
Sbjct: 261 VFPKEGPVLWVDTLAIPA-----------NAKHPDA-AHKLINYLLSEKVAEKLTLEI-- 306
Query: 181 GASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEA 231
P++ KLP E+ +QD + P AE+L + + + EA
Sbjct: 307 -GYPTSNLKAKAKLPAEI-----TQDPAIY---PAAEVLQNAHWQDDVGEA 348
>gi|401871804|pdb|4GL0|A Chain A, Putative SpermidinePUTRESCINE ABC TRANSPORTER FROM
LISTERIA Monocytogenes
Length = 333
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 106/245 (43%), Gaps = 37/245 (15%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN-SNNIDL 61
I Y K F N + W L+ PEL +I +++ REV G L +G S N +N L
Sbjct: 119 IIYNKEXFPDKNF---DTWNALFDPELKNQILLIDGAREVXGLGLNSLGYSLNDTNKAHL 175
Query: 62 QVAGGKISVQQ-NL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVA 119
Q A K+ N+ A++ ++ +L + + + VAV +S + + ++
Sbjct: 176 QAARDKLETXTPNVKAIVGDEIKLLXADN--------EAGVAVTFSGEAAEXLSENEDLE 227
Query: 120 VVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVI 179
V+PK G++LW D IP + K + G H++I F L+ A E +
Sbjct: 228 YVIPKDGSNLWFDNXVIPKTA----KNVDG--------AHKFINFXLKPENA-AINAEYV 274
Query: 180 PGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
A+P+A L LP+E+ S D P + L E + L + LS Y L
Sbjct: 275 GYATPNAKAVEL--LPKEI-----SSDERF---YPDXDELNNLEVYDNLGKRXLSYYNEL 324
Query: 240 VADLQ 244
+ +
Sbjct: 325 FLEFK 329
>gi|148825225|ref|YP_001289978.1| cytoplasmic sugar-binding protein [Haemophilus influenzae PittEE]
gi|229846583|ref|ZP_04466691.1| predicted cytoplasmic sugar-binding protein [Haemophilus influenzae
7P49H1]
gi|148715385|gb|ABQ97595.1| predicted cytoplasmic sugar-binding protein [Haemophilus influenzae
PittEE]
gi|229810676|gb|EEP46394.1| predicted cytoplasmic sugar-binding protein [Haemophilus influenzae
7P49H1]
Length = 350
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 19/155 (12%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLAL 76
I W DLW+PE G++ M + REV L G S N+ N D++ A ++ L
Sbjct: 151 ITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIKTAYERLE-----KL 205
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
L N A F+S + G+V + + W+ A K ++ V PK GA W D +AI
Sbjct: 206 LPNVAT-FNSDSPEVPYVQGEVAIGMIWNGSAYLAQKENQSLQFVYPKEGAIFWMDNYAI 264
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA 171
P +++ V G H++I+F L+ A
Sbjct: 265 PNSAQ--------NVEGA----HKFIDFLLRPENA 287
>gi|170743030|ref|YP_001771685.1| extracellular solute-binding protein [Methylobacterium sp. 4-46]
gi|168197304|gb|ACA19251.1| extracellular solute-binding protein family 1 [Methylobacterium sp.
4-46]
Length = 365
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 18/133 (13%)
Query: 17 PIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNID-LQVAGGKISV 70
P+ W + RPEL + ++M+++P ++ +VL +G +S +D L AG
Sbjct: 152 PLNTWDIVLRPELIAKLKDCGVTMLDAPEDIFPNVLAALGLKPDSKRVDDLNQAG----- 206
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
+ L + + F S+ Y+ GDV ++VG+S DVL A +R ++A +P+
Sbjct: 207 -EALFRIRGAVQKFHSSEYINQLANGDVCLSVGYSGDVLQARRRAQEAKNDVDIAYYIPQ 265
Query: 125 SGASLWADLWAIP 137
GA +W D +AIP
Sbjct: 266 QGALMWFDSFAIP 278
>gi|390450397|ref|ZP_10235990.1| extracellular solute-binding protein family 1 [Nitratireductor
aquibiodomus RA22]
gi|389662745|gb|EIM74302.1| extracellular solute-binding protein family 1 [Nitratireductor
aquibiodomus RA22]
Length = 365
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 18/138 (13%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNS-NNIDLQVAGGKIS 69
A ++ W ++ PELA + I M++S EV+ S L Y+G N+ ++ DL A
Sbjct: 151 AKVDTWDVMFTPELAAKFKDCGIYMLDSASEVVRSALIYLGLDPNTPSSDDLAKA----- 205
Query: 70 VQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVP 123
++ L + R F S+ Y+ GD+ +A+G+S D+ A R + V +P
Sbjct: 206 -EELLLSVRPYVRKFHSSEYINGLANGDICLALGYSGDIFQARDRAAEADQGVTVGYAIP 264
Query: 124 KSGASLWADLWAIPAASR 141
K GA LW D AIPA ++
Sbjct: 265 KEGAMLWFDQMAIPADAK 282
>gi|269104186|ref|ZP_06156882.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Photobacterium damselae subsp. damselae CIP
102761]
gi|268160826|gb|EEZ39323.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Photobacterium damselae subsp. damselae CIP
102761]
Length = 343
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 91/216 (42%), Gaps = 28/216 (12%)
Query: 16 APIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLA 75
PI WKDLW + A ++ +++ R+V G LK G S N+ N + ++ S+Q+
Sbjct: 143 TPITGWKDLWNADFARQVMLLDDVRDVFGMALKAQGHSINTTN-EAEIKQAYESLQK--- 198
Query: 76 LLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWA 135
L +++S + G+ + + W+ + A + M + V PK G+ LW D +
Sbjct: 199 -LRPNVVVYNSDAPHVPYVTGEASIGMQWNGNAYMAKQEMKELEFVYPKEGSILWMDNFI 257
Query: 136 IPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLP 195
IPA S L ++I F + +E P A + LP
Sbjct: 258 IPAGS------------ANKELAEKFINFIYRPENQAKIVEEF---GFPPATKDAKSHLP 302
Query: 196 EELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEA 231
+E+ QD +I P E + + EF + +A
Sbjct: 303 KEI------QDNPII--FPSEEDINKGEFTNDVGKA 330
>gi|225570462|ref|ZP_03779487.1| hypothetical protein CLOHYLEM_06563 [Clostridium hylemonae DSM
15053]
gi|225160659|gb|EEG73278.1| hypothetical protein CLOHYLEM_06563 [Clostridium hylemonae DSM
15053]
Length = 626
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 96/224 (42%), Gaps = 29/224 (12%)
Query: 17 PIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLAL 76
PI+ W LW I M +S R+ G LKY+G S NS ++D A K+ ++Q +
Sbjct: 424 PIDSWSVLWDETYKDSILMQDSVRDAFGITLKYLGYSLNSTDLDELEAAKKLLIEQKPLV 483
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
QA + D K G + + V +S + + ++ V+PK G+++W D W I
Sbjct: 484 ---QAYVIDQVR-DKMIG-NEAAIGVIYSGEAIYTQWENPDLEYVIPKEGSNVWIDSWVI 538
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEF-CLQTARALPFKQEVIPGASPSALETTLVKLP 195
P ++ + ++I F C + F + I ++P+ L++
Sbjct: 539 PKNAKHKENA------------EKFINFLCRPDIAKMNF--DYITYSTPNVGGRALIE-- 582
Query: 196 EELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
+E L+ P + PP + L RCE L + + Y L
Sbjct: 583 DEALRDNP-------IAFPPEKDLERCETFRFLGDENDAIYNEL 619
>gi|397688815|ref|YP_006526134.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
stutzeri DSM 10701]
gi|395810371|gb|AFN79776.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri DSM 10701]
Length = 365
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 87/191 (45%), Gaps = 29/191 (15%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W +++PE + ++ ++SP E++ + L Y+G + +S D ++ +
Sbjct: 151 APVDSWDLVFKPENIEKLKSCGVAFLDSPTEMLPAALHYLGYASDSGKADELKKAEELFL 210
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
Q + F S+ Y+ G++ VA+G+S D+ A R NV+ +PK
Sbjct: 211 Q-----IRPHVAYFHSSKYISDLANGNICVAIGYSGDIYQAKSRAEDAQNGVNVSYNIPK 265
Query: 125 SGASLWADLWAIPA-ASRLETKQ------IGGRVRGPSPLIHQWIEFCLQTARALPFKQE 177
GA + D+ AIPA A +E + V P I +++F A A P E
Sbjct: 266 EGAGSFFDMLAIPADAKNVENAHAFLNYLLKPEVMAP---IVDYVQFPSANAAATPLVDE 322
Query: 178 VI---PGASPS 185
I PG PS
Sbjct: 323 AIRTDPGIYPS 333
>gi|398871854|ref|ZP_10627162.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM74]
gi|398204929|gb|EJM91722.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM74]
Length = 365
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 92/204 (45%), Gaps = 30/204 (14%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP W L++PE A + IS ++SP E+I + L Y+G N N K +
Sbjct: 151 APTNSWDLLFKPENAEKLKACGISFLDSPTEMIPTALHYLGYPVNDQN--------KQHI 202
Query: 71 QQNLALLAN---QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVV 121
+ AL F S+ Y+ G++ VAVG+S DVL A R +
Sbjct: 203 AEAQALFMRIRPNVAYFHSSKYISDLANGNICVAVGYSGDVLQAKARAQEAGDKVKIDYS 262
Query: 122 VPKSGASLWADLWAIP-AASRLETKQIGGR-VRGPSPL--IHQWIEFCLQTARALPFKQE 177
+PK GA+ + D+ AIP A+ +E + + + P + I I + A A P E
Sbjct: 263 IPKEGAASFYDMLAIPRDAANVENAYLFMKFLMRPDVIADITNNIGYSNANAAATPLVDE 322
Query: 178 VI---PGAS-PSALETTLVKLPEE 197
I PG+ P A+ TL +P++
Sbjct: 323 AIRNDPGSYPPEAVMATLYAVPDQ 346
>gi|334122697|ref|ZP_08496733.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Enterobacter hormaechei ATCC 49162]
gi|333391812|gb|EGK62921.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Enterobacter hormaechei ATCC 49162]
Length = 370
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
++ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 157 LDSWDVVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL-- 213
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSG 126
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK G
Sbjct: 214 -LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEG 272
Query: 127 ASLWADLWAIPAASR 141
A + D++A+PA ++
Sbjct: 273 ALAFFDVFAMPADAK 287
>gi|319775579|ref|YP_004138067.1| spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
influenzae F3047]
gi|329122378|ref|ZP_08250965.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Haemophilus aegyptius ATCC
11116]
gi|317450170|emb|CBY86384.1| spermidine/putrescine-binding periplasmic protein 2 precursor
[Haemophilus influenzae F3047]
gi|327473660|gb|EGF19079.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Haemophilus aegyptius ATCC
11116]
Length = 350
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 19/155 (12%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLAL 76
I W DLW+PE G++ M + REV L G S N+ N D++ A ++ L
Sbjct: 151 ITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIKTAYERLE-----KL 205
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
L N A F+S + G+V + + W+ A K ++ V PK GA W D +AI
Sbjct: 206 LPNVAT-FNSDSPEVPYVQGEVAIGMIWNGSAYLAQKENQSLQFVYPKEGAIFWMDNYAI 264
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA 171
P +++ V G H++I+F L+ A
Sbjct: 265 PNSAQ--------NVEGA----HKFIDFLLRPENA 287
>gi|374315751|ref|YP_005062179.1| spermidine/putrescine-binding periplasmic protein [Sphaerochaeta
pleomorpha str. Grapes]
gi|359351395|gb|AEV29169.1| spermidine/putrescine-binding periplasmic protein [Sphaerochaeta
pleomorpha str. Grapes]
Length = 361
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 72/138 (52%), Gaps = 18/138 (13%)
Query: 14 NLAPIEDWKDLWR----PELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKIS 69
N ++D++ W +LAGR+ M++ REV+G LKY+G S N+ + +
Sbjct: 155 NKTMVKDYERTWNIFGDTKLAGRMVMMDDMREVMGDALKYLGYSVNTTD--------QAQ 206
Query: 70 VQQNLALLANQAR----LFDSTHYLKAFGIGDVWVAVGWSSDVLPAV--KRMSNVAVVVP 123
+++ L+ ++ + FD+ + K+F G+ WVA G++ + + + SNV +P
Sbjct: 207 LEEARRLVTDKWKPNLVKFDAEGFAKSFASGEYWVAQGYAEGIFEELPEDKWSNVDFFLP 266
Query: 124 KSGASLWADLWAIPAASR 141
++G ++ D IP +R
Sbjct: 267 ENGGPMYIDSMCIPKGAR 284
>gi|220924807|ref|YP_002500109.1| family 1 extracellular solute-binding protein [Methylobacterium
nodulans ORS 2060]
gi|219949414|gb|ACL59806.1| extracellular solute-binding protein family 1 [Methylobacterium
nodulans ORS 2060]
Length = 366
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 32/164 (19%)
Query: 17 PIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNID-LQVAGGKISV 70
P+ W + RPEL + ++M+++P ++ +VL +G +S ID L AG
Sbjct: 153 PLNTWDIVLRPELIVKLKDCGVTMLDAPEDLFPNVLAALGLKPDSKRIDDLNQAG----- 207
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
+ L + + F S+ Y+ GDV ++VG+S DVL A KR ++A +P+
Sbjct: 208 -EALMRVRGAVQKFHSSEYINQLANGDVCLSVGYSGDVLQARKRAQEAKNDVDIAYYIPQ 266
Query: 125 SGASLWADLWAIPAASRLETKQIGGRVRGPSPL-IHQWIEFCLQ 167
GA +W D +AIP + P P H +I+F L+
Sbjct: 267 QGALMWFDSFAIPKDA-------------PHPAEAHAFIDFMLR 297
>gi|365969713|ref|YP_004951274.1| putrescine-binding periplasmic protein [Enterobacter cloacae
EcWSU1]
gi|365748626|gb|AEW72853.1| Putrescine-binding periplasmic protein [Enterobacter cloacae
EcWSU1]
Length = 370
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
++ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 157 LDSWDVVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL-- 213
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSG 126
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK G
Sbjct: 214 -LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEG 272
Query: 127 ASLWADLWAIPAASR 141
A + D++A+PA ++
Sbjct: 273 ALAFFDVFAMPADAK 287
>gi|398350258|ref|YP_006395722.1| putrescine-binding periplasmic protein PotF [Sinorhizobium fredii
USDA 257]
gi|390125584|gb|AFL48965.1| putrescine-binding periplasmic protein PotF [Sinorhizobium fredii
USDA 257]
Length = 364
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 97/221 (43%), Gaps = 41/221 (18%)
Query: 20 DWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSN-NIDLQVAGGKISVQQN 73
+W ++ PE+A + I +++SP ++I S L Y+G + +S+ DL A +
Sbjct: 154 NWDVVFNPEIAAKFKDCGIHLLDSPTDIIPSALAYLGLNPDSHEQADLDKAA------EL 207
Query: 74 LALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGA 127
L + R F S+ Y+ A GD+ +AVG+S D+ A R + V +P GA
Sbjct: 208 LLKVRPYIRKFHSSEYINALANGDICLAVGFSGDIFQARDRAAEAKSGVTVDYSIPAQGA 267
Query: 128 SLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSAL 187
+W D+ AIPA + + H++I + + K EVI AS
Sbjct: 268 QMWFDMLAIPADAPHVAEA------------HEFINYMM--------KPEVIAKASNYVF 307
Query: 188 ETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPL 228
K ++ L + +DT + PP ++ + + P
Sbjct: 308 YANGNKASQQFLDKEVLEDTAI---YPPEAVMQKLFTVTPF 345
>gi|444378665|ref|ZP_21177859.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Enterovibrio sp. AK16]
gi|443677211|gb|ELT83898.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Enterovibrio sp. AK16]
Length = 347
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 91/216 (42%), Gaps = 38/216 (17%)
Query: 21 WKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLAN- 79
W DLW E AG+I +++ R+V G LK G S N+ N D +++ +L +
Sbjct: 152 WADLWNDEFAGQIMLLDDVRDVFGMALKAKGYSINTTNED--------EIKEAYEMLKDL 203
Query: 80 --QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 137
+++S F G+V + W+ + A M N+ V P G+ LW D + IP
Sbjct: 204 RPNVVVYNSDAPHVPFVTGEVGIGQQWNGNAYLAQAEMENIEFVYPDEGSILWMDNFIIP 263
Query: 138 -AASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEV-IPGASPSALETTLVKLP 195
A +++ L H++I+F + +E+ P S A E KL
Sbjct: 264 KGAEKID-------------LAHKFIDFLYRPENQAAMVEELGYPAPSKRAKE----KLS 306
Query: 196 EELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEA 231
E + N+I P E + + EF + EA
Sbjct: 307 AEY------TENNVI--FPSDEDVEKGEFTNDVGEA 334
>gi|433773782|ref|YP_007304249.1| spermidine/putrescine-binding periplasmic protein [Mesorhizobium
australicum WSM2073]
gi|433665797|gb|AGB44873.1| spermidine/putrescine-binding periplasmic protein [Mesorhizobium
australicum WSM2073]
Length = 365
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 16/132 (12%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
I+ W + P+ + + +++SP +++ + LKY+G NS + D +A ++
Sbjct: 153 IDSWDTFFNPDSLAKLKHCGVYVLDSPSDILPAALKYLGLDPNSTSPD-DIA----KAEE 207
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPA------VKRMSNVAVVVPKSG 126
L + R F S+ Y+ A GD+ +AVGWS DV A K+ + VPK G
Sbjct: 208 ALLKVRPYIRKFHSSEYINALANGDICLAVGWSGDVFQARNRAVEAKQGVEIGYSVPKEG 267
Query: 127 ASLWADLWAIPA 138
A +W D AIPA
Sbjct: 268 AQMWFDQMAIPA 279
>gi|219848607|ref|YP_002463040.1| family 1 extracellular solute-binding protein [Chloroflexus
aggregans DSM 9485]
gi|219542866|gb|ACL24604.1| extracellular solute-binding protein family 1 [Chloroflexus
aggregans DSM 9485]
Length = 398
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 100/222 (45%), Gaps = 38/222 (17%)
Query: 17 PIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLAL 76
PI+ W DLW P L G+I + PR+ I +LK +G S N+ + D Q+A +
Sbjct: 193 PIKRWSDLWNPTLDGKILLWPIPRDTINVLLKSLGYSINTTDTD-QLA----TALARAPA 247
Query: 77 LANQARLFDS-----THYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWA 131
LA + DS T YL + G+ VA+ W+ D A ++ + ++P+ G +W
Sbjct: 248 LAQRVGWVDSGVATATQYLVS---GEYAVALAWAYDARDAQQQDERITFIIPEDGTVIWL 304
Query: 132 DLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQ-TARALPFKQEVIPGASPSALETT 190
D + IP S L Q+I F L+ AL + VI A+ ++
Sbjct: 305 DSFVIPTTSTHPE------------LAEQFINFFLRPDMSALVTNELVIATANEASWP-- 350
Query: 191 LVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEAT 232
LVK PE L +T++ P +IL R E PL AT
Sbjct: 351 LVK-PELL------ANTSIF---PSNDILERAELEVPLDPAT 382
>gi|408479602|ref|ZP_11185821.1| putrescine ABC transporter substrate-binding periplasmic protein
[Pseudomonas sp. R81]
Length = 364
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 64/131 (48%), Gaps = 16/131 (12%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
I+ W L+ PE + +S ++S E++ +VL YMG + NS N D ++
Sbjct: 152 IDSWAVLFEPENMKKLATCGVSFMDSADEMLPAVLNYMGLNPNSTNPD-----DYKKAEE 206
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSG 126
L + F S+ Y+ G++ VA G+S DV A R + N+A +PK G
Sbjct: 207 KLLKVRPYVTYFHSSKYISDLANGNICVAAGFSGDVFQAKARAAEAGKGVNIAYTIPKEG 266
Query: 127 ASLWADLWAIP 137
+LW D+ AIP
Sbjct: 267 GNLWFDVLAIP 277
>gi|254469276|ref|ZP_05082681.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudovibrio sp. JE062]
gi|211961111|gb|EEA96306.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudovibrio sp. JE062]
Length = 368
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 70/135 (51%), Gaps = 22/135 (16%)
Query: 17 PIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQ 71
P++ W+ ++ P++ + I M+++P E+I + L ++G + +S++ K ++
Sbjct: 155 PVDSWEIIFNPDILAKFQDCGIHMLDAPTELIPAALNHLGLNPDSHD--------KADIE 206
Query: 72 QNLALLAN---QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVV 122
+ LL + F S+ Y+ A GD+ +A+GWS DV A R + V ++
Sbjct: 207 KAAELLKTIRPYVQKFHSSEYINALANGDICLAIGWSGDVFQARDRAAEADNGVTVNYII 266
Query: 123 PKSGASLWADLWAIP 137
PK GA +W D AIP
Sbjct: 267 PKEGALMWFDQMAIP 281
>gi|398992661|ref|ZP_10695625.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM21]
gi|398136670|gb|EJM25751.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM21]
Length = 365
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 66/135 (48%), Gaps = 18/135 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W L+ PE + ++ ++S E++ +VL YMG + NS N D + A K
Sbjct: 153 IDSWSVLFEPENIKKLQSCGVAFLDSADEMMPTVLNYMGLNANSTNPEDYKKAEAK---- 208
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
L + F S+ Y+ GD+ +A+G+S D+ A R NVA +PK
Sbjct: 209 --LLAVRPYVTYFHSSKYIADLANGDICIAIGFSGDMFQAKARAEEAGKGVNVAYTIPKE 266
Query: 126 GASLWADLWAIPAAS 140
G +LW D+ AIP S
Sbjct: 267 GGALWFDMLAIPKDS 281
>gi|398983481|ref|ZP_10690058.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM24]
gi|399013788|ref|ZP_10716090.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM16]
gi|398112689|gb|EJM02545.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM16]
gi|398157207|gb|EJM45608.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM24]
Length = 365
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W L+ PE + ++ ++S E++ +VL Y+G + NS N D + A K
Sbjct: 153 IDSWGVLFEPENIKKLQSCGVAFLDSADEMMPTVLNYLGLNANSTNPKDYEKATDK---- 208
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
L + F S+ Y+ GD+ VA+G+S D+ A R + N+A VPK
Sbjct: 209 --LLAVRPYVTYFHSSKYIGDLANGDICVAIGFSGDIFQAKNRAAEAKKGVNIAYAVPKE 266
Query: 126 GASLWADLWAIPAAS 140
G +LW D+ AIP S
Sbjct: 267 GGALWFDMLAIPKDS 281
>gi|385787871|ref|YP_005818980.1| putrescine ABC transporter periplasmic-binding protein [Erwinia sp.
Ejp617]
gi|310767143|gb|ADP12093.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Erwinia sp. Ejp617]
Length = 369
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE R +S +++P E+ +VL Y G NS++ +G +
Sbjct: 154 APVNSWDLVLKPENLARLKSCGVSFLDAPEEIFATVLNYQGKDPNSSDAK-DYSGAATDL 212
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM------SNVAVVVPK 124
L L R F S+ Y+ G++ VA+GW+ DVL A R ++A +PK
Sbjct: 213 ---LLKLRPNIRYFHSSQYINDLANGNICVAIGWAGDVLQAKNRALAAKNGVDIAYSIPK 269
Query: 125 SGASLWADLWAIP--AASRLETKQIGGRVRGPSPL--IHQWIEFCLQTARALPFKQEVI- 179
GA + D AIP A + E Q + P + I + + ++PF I
Sbjct: 270 EGALAFFDTLAIPKDAKNVDEAYQFLNYLLKPEVMAQISNAVFYASGNKASVPFVDAAIR 329
Query: 180 --PGASPSA 186
PG P A
Sbjct: 330 NNPGVYPPA 338
>gi|395499287|ref|ZP_10430866.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. PAMC 25886]
gi|395793876|ref|ZP_10473221.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. Ag1]
gi|421143690|ref|ZP_15603626.1| extracellular solute-binding protein, family 1 [Pseudomonas
fluorescens BBc6R8]
gi|395341989|gb|EJF73785.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
sp. Ag1]
gi|404505108|gb|EKA19142.1| extracellular solute-binding protein, family 1 [Pseudomonas
fluorescens BBc6R8]
Length = 362
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 63/133 (47%), Gaps = 18/133 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W L+ PE + ++ ++S E+ ++L YMG S N D + A K
Sbjct: 150 IDSWAVLFEPENIKKLHECGVAFLDSADELFPAILNYMGKDPRSENPEDYKQAEAK---- 205
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
L L F S+ Y+ GD+ VA G+S DV A R N+A +PK
Sbjct: 206 --LLTLRPYITYFHSSKYISDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYSIPKE 263
Query: 126 GASLWADLWAIPA 138
G++LW DL AIPA
Sbjct: 264 GSNLWFDLLAIPA 276
>gi|398917403|ref|ZP_10658140.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
gi|398172997|gb|EJM60845.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
Length = 365
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 32/205 (15%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQ-VAGGK-- 67
AP W L++PE A + IS ++SP E++ + L Y+G Y N+ D Q +A +
Sbjct: 151 APTNSWDLLFKPENAEKLKACGISFLDSPTEMLPTALHYLG--YPVNDQDKQHIAEAEAL 208
Query: 68 -ISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAV 120
+ ++ N+A F S+ Y+ G++ VAVG+S DVL A R +
Sbjct: 209 FMKIRPNVAY-------FHSSKYISDLANGNICVAVGYSGDVLQAKARAQEAGDKVKIDY 261
Query: 121 VVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPL--IHQWIEFCLQTARALPFKQ 176
+PK GA+ + D+ AIP AA+ + P + I I + A A P
Sbjct: 262 SIPKEGAASFYDMLAIPRDAANVENAYLFMNFLMRPDVIADITNNIGYSNANAAATPLVD 321
Query: 177 EVI---PGASPS-ALETTLVKLPEE 197
E I PG+ PS A+ TL +P++
Sbjct: 322 EAIRNDPGSYPSEAVMATLYAVPDQ 346
>gi|126698611|ref|YP_001087508.1| ABC transporter spermidine/putrescine solute-binding protein
[Clostridium difficile 630]
gi|255100064|ref|ZP_05329041.1| spermidine/putrescine ABC transporter,substrate-binding lipoprotein
[Clostridium difficile QCD-63q42]
gi|115250048|emb|CAJ67868.1| ABC-type transport system,spermidine/putrescine solute-binding
protein [Clostridium difficile 630]
Length = 350
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 102/239 (42%), Gaps = 35/239 (14%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDL 61
I Y K + + P++ W LW P+ G I M +S R+ IG LK +G S NS N ++
Sbjct: 140 ILYNKKEVKD----PMDSWNILWNPKYKGNIMMFDSVRDTIGITLKKLGYSMNSVNPKEI 195
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
A + Q++L L D + G G+V + + +S D + +++ ++
Sbjct: 196 NEAKNLLMKQKDLVLAYVNDEGKD-----RLLG-GEVAMGMLYSGDAVTLMEQNPDLDYA 249
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
+PK G + W D +P ++ + + +I F L A E I
Sbjct: 250 IPKEGTNKWVDAMCVPTTAQNKKEA------------ELFINFLLDPENA-KVNAEYIGY 296
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEA-TLSDYEWL 239
++P+ T +KL + + P V P E+L +CE E + E L D W+
Sbjct: 297 STPN---TGALKLLDPEITQNP-------VAYPSKEVLDKCETFEDIGENIKLYDKAWI 345
>gi|418853425|ref|ZP_13408114.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
gi|392826686|gb|EJA82407.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
Length = 370
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPE-----LAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+ NS+ D G +
Sbjct: 155 APVNSWDLVLKPENLEKLKSCDVSFLDAPEEIFATVLNYLDKDPNSSKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N++ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|336422449|ref|ZP_08602593.1| hypothetical protein HMPREF0993_01970 [Lachnospiraceae bacterium
5_1_57FAA]
gi|336008375|gb|EGN38393.1| hypothetical protein HMPREF0993_01970 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 628
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 96/224 (42%), Gaps = 29/224 (12%)
Query: 17 PIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLAL 76
PI+ W LW + I M +S R+ G LKY+G S NS ++D A K+ ++Q +
Sbjct: 426 PIDSWSVLWDEKYKDNILMQDSVRDAFGVTLKYLGYSLNSTDLDELEAAKKLLIKQKPLV 485
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
QA + D K G + + V +S + + N+ V+PK G+++W D W I
Sbjct: 486 ---QAYVIDQVR-DKMIG-NEAAIGVIYSGEAIYTQWENPNLEYVIPKEGSNVWIDSWVI 540
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEF-CLQTARALPFKQEVIPGASPSALETTLVKLP 195
P ++ + ++I F C + F + I ++P+ L++ P
Sbjct: 541 PKNAKHKENA------------EKFINFICRPDIAKMNF--DYITYSTPNEAGRQLIEDP 586
Query: 196 EELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
L+ P + P E LA CE + L + + Y L
Sbjct: 587 A--LRNSP-------IAFPDPEELANCETFKFLGDENDALYNEL 621
>gi|261339163|ref|ZP_05967021.1| hypothetical protein ENTCAN_05386 [Enterobacter cancerogenus ATCC
35316]
gi|288319007|gb|EFC57945.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Enterobacter cancerogenus ATCC 35316]
Length = 370
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
++ W + +PE + +S +++P E+ +VL Y+G NS+ D G +
Sbjct: 157 LDSWDVVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSKAD-DYTGPATDL-- 213
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSG 126
L L R F S+ Y+ GD+ VA+GW+ DV A R NV+ +PK G
Sbjct: 214 -LLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQAANRAKEAKNGVNVSYFIPKEG 272
Query: 127 ASLWADLWAIPAASR 141
A + D++A+PA ++
Sbjct: 273 ALAFFDVFAMPADAK 287
>gi|456012794|gb|EMF46482.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Planococcus halocryophilus Or1]
Length = 358
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 92/228 (40%), Gaps = 30/228 (13%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID-LQVAGGKISVQQNLAL 76
E W DLW P L + +V+S RE+IG L +G S NS N+D L+ A K L
Sbjct: 155 FESWDDLWNPSLEQEVILVDSAREIIGLGLNSLGYSLNSTNVDELREATDK------LKT 208
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
+ + ++ + VAV WS + ++ VPK G++LW D I
Sbjct: 209 MGPNVKAIIGDEIVELMRREEAAVAVTWSGQAADMMWINEDIDYSVPKEGSNLWFDNMII 268
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPE 196
P + G + G H +I F L A + + ++P+ TL+ PE
Sbjct: 269 P--------KTAGNIEGA----HAFINFMLDPEVAAQ-NADYVGYSTPNEKAVTLMD-PE 314
Query: 197 ELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVADLQ 244
++D PP E+ R E E L L Y L + +
Sbjct: 315 ------VTEDERF---YPPVELRERLEVYENLGLEMLGTYNELFLEFK 353
>gi|259908954|ref|YP_002649310.1| putrescine ABC transporter periplasmic-binding protein [Erwinia
pyrifoliae Ep1/96]
gi|387871873|ref|YP_005803248.1| putrescine ABC transporter substrate-binding protein [Erwinia
pyrifoliae DSM 12163]
gi|224964576|emb|CAX56089.1| Putrescine-binding periplasmic protein [Erwinia pyrifoliae Ep1/96]
gi|283478961|emb|CAY74877.1| putrescine ABC transport system, periplasmic component [Erwinia
pyrifoliae DSM 12163]
Length = 369
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 83/189 (43%), Gaps = 22/189 (11%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE R +S +++P E+ +VL Y G NS++ +G +
Sbjct: 154 APVNSWDLVLKPENLARLKSCGVSFLDAPEEIFATVLNYQGKDPNSSDAK-DYSGAATDL 212
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM------SNVAVVVPK 124
L L R F S+ Y+ G++ VA+GW+ DVL A R ++A +PK
Sbjct: 213 ---LLKLRPNIRYFHSSQYINDLANGNICVAIGWAGDVLQAKNRALAAKNGVDIAYSIPK 269
Query: 125 SGASLWADLWAIP--AASRLETKQIGGRVRGPSPL--IHQWIEFCLQTARALPFKQEVI- 179
GA + D AIP A + E Q + P + I + + ++PF I
Sbjct: 270 EGALAFFDTLAIPKDAKNVDEAYQFLNYLLKPEVMAQISNAVFYASGNKASVPFVDAAIR 329
Query: 180 --PGASPSA 186
PG P A
Sbjct: 330 NNPGVYPPA 338
>gi|326797025|ref|YP_004314845.1| extracellular solute-binding protein [Marinomonas mediterranea
MMB-1]
gi|326547789|gb|ADZ93009.1| extracellular solute-binding protein family 1 [Marinomonas
mediterranea MMB-1]
Length = 373
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 16 APIEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W +++ E ++ ++SP E+ L Y+G N N+ D +
Sbjct: 156 APVDSWDLVFKAENMKKLQSCGVMFLDSPDELYPLALNYVGK--NPNSHDRKDYSTDSEA 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
+ L + R F S+ Y+ A G++ VA+GWS DV+ A R S N+ +PK
Sbjct: 214 AKVLKSVRPYVRQFHSSQYISALANGEICVAIGWSGDVIQAQDRASEAENGVNIEYSIPK 273
Query: 125 SGASLWADLWAIPAASR 141
G +W D+ AIP ++
Sbjct: 274 EGTQIWFDMLAIPKGAK 290
>gi|251794433|ref|YP_003009164.1| extracellular solute-binding protein [Paenibacillus sp. JDR-2]
gi|247542059|gb|ACS99077.1| extracellular solute-binding protein family 1 [Paenibacillus sp.
JDR-2]
Length = 356
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 99/229 (43%), Gaps = 38/229 (16%)
Query: 21 WKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID-LQVAGGKIS-VQQNL-ALL 77
W DLW P L +I +++ REVIG L + S N N + LQ A K+S + N+ A++
Sbjct: 157 WNDLWDPSLKNQILLLDGAREVIGMGLNSLHYSLNDTNEEHLQAAKAKLSTLTPNVKAIV 216
Query: 78 ANQARLFDSTHYLKAFGIGDVWVAVG--WSSDVLPAVKRMSNVAVVVPKSGASLWADLWA 135
++ +L + + AVG WS D + + VVP+ G++LW D
Sbjct: 217 GDEIKLL----------LANEEAAVGLVWSGDASEIMSENEKLDYVVPEEGSNLWFDNMV 266
Query: 136 IPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLP 195
IP + K I G H++I F L A E + ++P+A L LP
Sbjct: 267 IPKTA----KNIEGA--------HKFINFMLDPEHAAQ-NAEYVGYSTPNA--KALEYLP 311
Query: 196 EELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVADLQ 244
EE+ S D P E+ + E + L + L Y L + +
Sbjct: 312 EEI-----SGDKRF---YPDKELTEKLEVYKNLGKKMLVHYNELFLEFK 352
>gi|255305953|ref|ZP_05350125.1| spermidine/putrescine ABC transporter,substrate-binding lipoprotein
[Clostridium difficile ATCC 43255]
gi|423090206|ref|ZP_17078514.1| putative spermidine/putrescine ABC transporter [Clostridium
difficile 70-100-2010]
gi|357556881|gb|EHJ38452.1| putative spermidine/putrescine ABC transporter [Clostridium
difficile 70-100-2010]
Length = 350
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 102/239 (42%), Gaps = 35/239 (14%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDL 61
I Y K + + P++ W LW P+ G I M +S R+ IG LK +G S NS N ++
Sbjct: 140 ILYNKKEVKD----PMDSWNILWNPKYKGNIMMFDSVRDTIGITLKKLGYSMNSVNPKEI 195
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
A + Q++L L D + G G+V + + +S D + +++ ++
Sbjct: 196 NEAKNLLMKQKDLVLAYVNDEGKD-----RLLG-GEVAMGMLYSGDAVTLMEQNPDLDYA 249
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
+PK G + W D +P ++ + + +I F L A E I
Sbjct: 250 IPKEGTNKWVDAMCVPTTAQNKKEA------------ELFINFLLDPENA-KVNAEYIGY 296
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEA-TLSDYEWL 239
++P+ T +KL + + P V P E+L +CE E + E L D W+
Sbjct: 297 STPN---TGALKLLDPEITQNP-------VAYPSKEVLDKCETFEDIGENIKLYDKAWI 345
>gi|226324583|ref|ZP_03800101.1| hypothetical protein COPCOM_02367 [Coprococcus comes ATCC 27758]
gi|225207031|gb|EEG89385.1| ABC transporter, solute-binding protein [Coprococcus comes ATCC
27758]
Length = 627
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 61/122 (50%), Gaps = 7/122 (5%)
Query: 17 PIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID-LQVAGGKISVQQNLA 75
PI+ W LW P+ I M +S R+ G LKY+G S NS ++D L A + Q+ L
Sbjct: 425 PIDSWSVLWDPKYKDSILMQDSVRDAFGVTLKYLGYSLNSTDLDELNEAKNLLIKQKPLV 484
Query: 76 LLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWA 135
QA + D K G + + V +S + + K N+ V+PK G+++W D W
Sbjct: 485 ----QAYVVDQVR-DKMIG-NEAAIGVIYSGEAIYTQKENPNLEYVIPKEGSNIWIDSWV 538
Query: 136 IP 137
IP
Sbjct: 539 IP 540
>gi|190149659|ref|YP_001968184.1| spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|307260842|ref|ZP_07542528.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|307262967|ref|ZP_07544589.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|189914790|gb|ACE61042.1| spermidine/putrescine-binding periplasmic protein 1 precursor
[Actinobacillus pleuropneumoniae serovar 7 str. AP76]
gi|306869409|gb|EFN01200.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306871593|gb|EFN03315.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 360
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 80/179 (44%), Gaps = 22/179 (12%)
Query: 21 WKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQ 80
W DLW+PE A ++ +++ REV L +G + N+ N++ A + L L
Sbjct: 163 WGDLWKPEFANKVQLLDDAREVFNIALLKLGKNPNTTNLEEIKAA-----YEELRKLRPN 217
Query: 81 ARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 140
F S + +F G+V V W+ V A K + V +V PK G LW D AIPA +
Sbjct: 218 VLSFTSDNPANSFIAGEVSVGQLWNGSVRIAKKEQAPVNMVFPKEGPVLWVDTLAIPANA 277
Query: 141 RLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEV-IPGASPSALETTLVKLPEEL 198
+ + H+ I + L A E+ P ++ AL+T LP+E+
Sbjct: 278 KNKEN------------AHKLINYLLSAPVAEKLTLEIGYPTSNVEALKT----LPKEI 320
>gi|170719470|ref|YP_001747158.1| extracellular solute-binding protein [Pseudomonas putida W619]
gi|169757473|gb|ACA70789.1| extracellular solute-binding protein family 1 [Pseudomonas putida
W619]
Length = 401
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 18/136 (13%)
Query: 18 IEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W L+ PE ++S ++S E++ +VL YMG NS N D + A +
Sbjct: 189 IDSWAVLFEPENMKKLSQCGVAFLDSADEMLPAVLNYMGLDPNSTNPKDYEKA------E 242
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
Q L + F S+ Y+ GD+ VA G+S DV A R N+A +PK
Sbjct: 243 QKLLAVRPYVTYFHSSKYITDLANGDICVAAGFSGDVFQAKARAEEAEKGVNLAYAIPKE 302
Query: 126 GASLWADLWAIPAASR 141
G +LW D+ A+P ++
Sbjct: 303 GGNLWFDVLAVPKDAK 318
>gi|254974578|ref|ZP_05271050.1| spermidine/putrescine ABC transporter,substrate-binding lipoprotein
[Clostridium difficile QCD-66c26]
gi|255091968|ref|ZP_05321446.1| spermidine/putrescine ABC transporter,substrate-binding lipoprotein
[Clostridium difficile CIP 107932]
gi|255313703|ref|ZP_05355286.1| spermidine/putrescine ABC transporter,substrate-binding lipoprotein
[Clostridium difficile QCD-76w55]
gi|255516385|ref|ZP_05384061.1| spermidine/putrescine ABC transporter,substrate-binding lipoprotein
[Clostridium difficile QCD-97b34]
gi|255649485|ref|ZP_05396387.1| spermidine/putrescine ABC transporter,substrate-binding lipoprotein
[Clostridium difficile QCD-37x79]
gi|260682651|ref|YP_003213936.1| spermidine/putrescine ABC transporter substrate-binding protein
[Clostridium difficile CD196]
gi|260686251|ref|YP_003217384.1| spermidine/putrescine ABC transporter substrate-binding protein
[Clostridium difficile R20291]
gi|306519559|ref|ZP_07405906.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
difficile QCD-32g58]
gi|384360232|ref|YP_006198084.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium
difficile BI1]
gi|260208814|emb|CBA61720.1| spermidine/putrescine ABC transporter, substrate-binding
lipoprotein [Clostridium difficile CD196]
gi|260212267|emb|CBE03005.1| spermidine/putrescine ABC transporter, substrate-binding
lipoprotein [Clostridium difficile R20291]
Length = 350
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 102/239 (42%), Gaps = 35/239 (14%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDL 61
I Y K + + P++ W LW P+ G I M +S R+ IG LK +G S NS N ++
Sbjct: 140 ILYNKKEVKD----PMDSWNILWNPKYKGNIMMFDSVRDTIGITLKKLGYSMNSVNPKEI 195
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
A + Q++L L D + G G+V + + +S D + +++ ++
Sbjct: 196 NEAKNLLMKQKDLVLAYVNDEGKD-----RLLG-GEVAMGMLYSGDAVTLMEQNPDLDYA 249
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
+PK G + W D +P ++ + + +I F L A E I
Sbjct: 250 IPKEGTNKWVDAMCVPTTAQNKKEA------------ELFINFLLDPENA-KVNAEYIGY 296
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEA-TLSDYEWL 239
++P+ T +KL + + P V P E+L +CE E + E L D W+
Sbjct: 297 STPN---TGALKLLDPEITQNP-------VAYPSKEVLDKCETFEDIGENIKLYDKAWI 345
>gi|398927515|ref|ZP_10662982.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
gi|398169659|gb|EJM57635.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
Length = 365
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 32/205 (15%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQ-VAGGK-- 67
AP W L++PE A + IS ++SP E++ + L Y+G Y N+ D Q +A +
Sbjct: 151 APTNSWDLLFKPENAEKLKACGISFLDSPTEMLPTALHYLG--YPVNDQDKQHIAEAEAL 208
Query: 68 -ISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAV 120
+ ++ N+A F S+ Y+ G++ VAVG+S DVL A R +
Sbjct: 209 FMKIRPNVAY-------FHSSKYISDLANGNICVAVGYSGDVLQAKARAQEAGDKVKIDY 261
Query: 121 VVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPL--IHQWIEFCLQTARALPFKQ 176
+PK GA+ + D+ AIP AA+ + P + I I + A A P
Sbjct: 262 SIPKEGAASFYDMLAIPRDAANVENAYLFMNFLMRPDVIADITNNIGYSNANAAATPLVD 321
Query: 177 EVI---PGASPS-ALETTLVKLPEE 197
E I PG+ PS A+ TL +P++
Sbjct: 322 EAIRNDPGSYPSEAVMATLYAVPDQ 346
>gi|398892965|ref|ZP_10645887.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
gi|398184856|gb|EJM72287.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM55]
Length = 414
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 30/204 (14%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGK--- 67
AP W L++PE A + IS ++SP E+I + L Y+G N N +A +
Sbjct: 200 APTNSWDLLFKPENAEKLKACGISFLDSPTEMIPTALHYLGYPVNDQN-KQHIAEAEALF 258
Query: 68 ISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVV 121
+ ++ N+A F S+ Y+ G++ VAVG+S DVL A R +
Sbjct: 259 MKIRPNVAY-------FHSSKYISDLANGNICVAVGYSGDVLQAKARAQEAGNKVKIDYS 311
Query: 122 VPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPL--IHQWIEFCLQTARALPFKQE 177
+PK GA+ + D+ AIP AA+ + P + I I + A A P E
Sbjct: 312 IPKEGAASFYDMLAIPRDAANVENAYLFMNFLMRPDVIADITNNIGYSNANAAATPLVDE 371
Query: 178 VI---PGAS-PSALETTLVKLPEE 197
I PG+ P A+ TL +P++
Sbjct: 372 AIRNDPGSYPPEAVMATLYAVPDQ 395
>gi|395799458|ref|ZP_10478739.1| putrescine ABC transporter substrate-binding periplasmic protein
[Pseudomonas sp. Ag1]
gi|421141037|ref|ZP_15601031.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens BBc6R8]
gi|395336562|gb|EJF68422.1| putrescine ABC transporter substrate-binding periplasmic protein
[Pseudomonas sp. Ag1]
gi|404507808|gb|EKA21784.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens BBc6R8]
Length = 364
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 18/132 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W L+ PE + +S ++S E++ +VL YMG + NS N D + A +
Sbjct: 152 IDSWAVLFEPENMKKLATCGVSFMDSADEMLPAVLNYMGLNPNSTNPEDYKKA------E 205
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
+ L + F S+ Y+ G++ VA G+S DV A R + N+A V+PK
Sbjct: 206 EKLLKVRPYVTYFHSSKYISDLANGNICVAAGFSGDVFQAKARAAEAGKGVNIAYVIPKE 265
Query: 126 GASLWADLWAIP 137
G +LW D+ AIP
Sbjct: 266 GGNLWFDVLAIP 277
>gi|395495482|ref|ZP_10427061.1| putrescine ABC transporter substrate-binding periplasmic protein
[Pseudomonas sp. PAMC 25886]
Length = 364
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 18/132 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W L+ PE + +S ++S E++ +VL YMG + NS N D + A +
Sbjct: 152 IDSWAVLFEPENMKKLASCGVSFMDSADEMLPAVLNYMGLNPNSTNPEDYKKA------E 205
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
+ L + F S+ Y+ G++ VA G+S DV A R + N+A V+PK
Sbjct: 206 EKLLKVRPYVTYFHSSKYISDLANGNICVAAGFSGDVFQAKARAAEAGKGVNIAYVIPKE 265
Query: 126 GASLWADLWAIP 137
G +LW D+ AIP
Sbjct: 266 GGNLWFDVLAIP 277
>gi|219871497|ref|YP_002475872.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Haemophilus parasuis SH0165]
gi|219691701|gb|ACL32924.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Haemophilus parasuis SH0165]
Length = 349
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 81/186 (43%), Gaps = 29/186 (15%)
Query: 16 APIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLA 75
+ I W DLW+PE G++ ++N REV L G S N+ N D ++ + + L
Sbjct: 147 STITSWGDLWKPEFKGKVLLMNDSREVFHMALLLDGKSPNTTNAD-EIK----TAYERLT 201
Query: 76 LLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWA 135
L +F+S + G+V + + W+ A ++ + PK GA +W D +
Sbjct: 202 KLVPNVLVFNSDSPEMPYLQGEVAIGMQWTGSAYRAKSENPDLKFIFPKEGAVIWMDNYV 261
Query: 136 IPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLP 195
IP ++ K+ H++I+F L+ P ++ + +ET +P
Sbjct: 262 IPKNAK--NKEAA----------HKFIDFLLR------------PESAKTVIETMGFSMP 297
Query: 196 EELLKG 201
E +K
Sbjct: 298 NENVKA 303
>gi|239834302|ref|ZP_04682630.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239822365|gb|EEQ93934.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 381
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 21/153 (13%)
Query: 3 IAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNS 56
I Y K+K ++ I+ W L+ PE + + I +++S E++ L Y+G NS
Sbjct: 153 IGYNKAKIKEALGTDTIDSWAVLFDPEQSAKLKDCGIYLLDSASEMLRPALNYLGLDPNS 212
Query: 57 NN-IDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 114
+ DLQ A Q+L L + R F S+ Y+ A GD+ +AVG+S D+ A R
Sbjct: 213 PSPDDLQKA-------QDLYLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDR 265
Query: 115 MS------NVAVVVPKSGASLWADLWAIPAASR 141
+ +PK GA +W D AIPA ++
Sbjct: 266 AEKAKQGVEIGYSIPKEGALMWFDQMAIPADAK 298
>gi|402312595|ref|ZP_10831519.1| ABC transporter, solute-binding protein [Lachnospiraceae bacterium
ICM7]
gi|400369053|gb|EJP22056.1| ABC transporter, solute-binding protein [Lachnospiraceae bacterium
ICM7]
Length = 366
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 7/110 (6%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQNLAL 76
I+ + DLW PELAG + ++ + R + G LK +G S+N+N++ +Q AG K L
Sbjct: 163 IQGYNDLWNPELAGNVGIIGNYRVIDGITLKSLGYSFNTNDLTQIQEAGDK------LKT 216
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSG 126
LA RL + + G+V A ++S V A+K ++ VV PK G
Sbjct: 217 LAPNIRLINDNNLQDYLLSGEVGAAFMYTSQVTQAIKANPDLKVVYPKEG 266
>gi|359299639|ref|ZP_09185478.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Haemophilus [parainfluenzae] CCUG 13788]
Length = 346
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 89/206 (43%), Gaps = 32/206 (15%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNS-NNIDLQVAGGKISVQQNLAL 76
I W DLWR E G++ ++N PREV L G S NS N +++ A + L
Sbjct: 145 ISSWGDLWRDEYKGKLLLMNDPREVFHIALLLDGKSPNSENEAEIKAA------YERLQK 198
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
+ +F+S + G+V V + WS A ++ + PK GA LW D + I
Sbjct: 199 IVPNVLVFNSDSPEMPYLQGEVSVGMQWSGSAHRAKSENPDLKFIFPKEGAVLWMDNYVI 258
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPE 196
P + E K+ H++I+F L+ P ++ +ET +P
Sbjct: 259 PKGA--ENKEAA----------HKFIDFLLR------------PESAKEVIETMGFSMPN 294
Query: 197 ELLKGKPSQD-TNLIVGVPPAEILAR 221
E +K S + N + PP+E + +
Sbjct: 295 EGVKALLSPELANDPLIFPPSEEINK 320
>gi|423081922|ref|ZP_17070517.1| putative spermidine/putrescine ABC transporter [Clostridium
difficile 002-P50-2011]
gi|423085526|ref|ZP_17073968.1| putative spermidine/putrescine ABC transporter [Clostridium
difficile 050-P50-2011]
gi|357549172|gb|EHJ31019.1| putative spermidine/putrescine ABC transporter [Clostridium
difficile 002-P50-2011]
gi|357549443|gb|EHJ31289.1| putative spermidine/putrescine ABC transporter [Clostridium
difficile 050-P50-2011]
Length = 350
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 102/239 (42%), Gaps = 35/239 (14%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDL 61
I Y K + + P++ W LW P+ G I M +S R+ IG LK +G S NS N ++
Sbjct: 140 ILYNKKEVKD----PMDSWDILWNPKYKGNIMMFDSVRDTIGITLKKLGYSMNSVNPKEI 195
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
A + Q++L L D + G G+V + + +S D + +++ ++
Sbjct: 196 NEAKNLLMKQKDLVLAYVNDEGKD-----RLLG-GEVAMGMLYSGDAVTLMEQNPDLDYA 249
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
+PK G + W D +P ++ + + +I F L A E I
Sbjct: 250 IPKEGTNKWVDAMCVPTTAQNKKEA------------ELFINFLLDPENA-KVNAEYIGY 296
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEA-TLSDYEWL 239
++P+ T +KL + + P V P E+L +CE E + E L D W+
Sbjct: 297 STPN---TGALKLLDPEITQNP-------VAYPSKEVLDKCETFEDIGENIKLYDKAWI 345
>gi|288940868|ref|YP_003443108.1| family 1 extracellular solute-binding protein [Allochromatium
vinosum DSM 180]
gi|288896240|gb|ADC62076.1| extracellular solute-binding protein family 1 [Allochromatium
vinosum DSM 180]
Length = 368
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 63/133 (47%), Gaps = 18/133 (13%)
Query: 17 PIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISV 70
P++ W ++ PE A + IS+++ P EV + L Y+G NS DL+ A I
Sbjct: 155 PLDTWALIFDPEKASKLAGCGISLLDDPTEVFAAALVYLGKDPNSQAPEDLEAAAELIKA 214
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
+ R F S+ Y+ G VA G+S DVL A +R VA +P+
Sbjct: 215 ------VRPHIRYFHSSQYISDLANGATCVAHGYSGDVLQARERAEEAGKGVTVAYRIPR 268
Query: 125 SGASLWADLWAIP 137
GA LW D+ AIP
Sbjct: 269 EGAVLWTDVMAIP 281
>gi|402304825|ref|ZP_10823889.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
sputorum HK 2154]
gi|400377232|gb|EJP30112.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
sputorum HK 2154]
Length = 346
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 89/206 (43%), Gaps = 32/206 (15%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNS-NNIDLQVAGGKISVQQNLAL 76
I W DLWR E G++ ++N PREV L G S NS N +++ A + L
Sbjct: 145 ISSWGDLWRDEYKGKLLLMNDPREVFHIALLLDGKSPNSENEAEIKAA------YERLQK 198
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
+ +F+S + G+V V + WS A ++ + PK GA LW D + I
Sbjct: 199 IVPNVLVFNSDSPEMPYLQGEVSVGMQWSGSAHRAKSENPDLKFIFPKEGAVLWMDNYVI 258
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPE 196
P + E K+ H++I+F L+ P ++ +ET +P
Sbjct: 259 PKGA--ENKEAA----------HKFIDFLLR------------PESAKEVIETMGFSMPN 294
Query: 197 ELLKGKPSQD-TNLIVGVPPAEILAR 221
E +K S + N + PP+E + +
Sbjct: 295 EGVKALLSPELVNDPLIFPPSEEINK 320
>gi|119775774|ref|YP_928514.1| polyamine ABC transporter periplasmic polyamine-binding protein
[Shewanella amazonensis SB2B]
gi|119768274|gb|ABM00845.1| polyamine ABC transporter, periplasmic polyamine-binding protein
[Shewanella amazonensis SB2B]
Length = 366
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 67/134 (50%), Gaps = 18/134 (13%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKIS 69
AP++ W ++ P A + I++++SP E++ L Y+G + NS + D + AG
Sbjct: 152 APVDSWDLIFNPANAEKLAKCGIAVLDSPDEILPPALNYLGLNPNSTDPADYEKAG---- 207
Query: 70 VQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVP 123
+ L + + F S+ Y+ G++ A+GWS DVL A R V +P
Sbjct: 208 --EVLLKIRPYLKYFHSSRYISDLANGEICAAIGWSGDVLQAQARAEEAGNGQQVDYRIP 265
Query: 124 KSGASLWADLWAIP 137
K GA LW D+ AIP
Sbjct: 266 KEGAPLWFDMMAIP 279
>gi|418808399|ref|ZP_13363954.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|418812556|ref|ZP_13368079.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|418815809|ref|ZP_13371304.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|418820021|ref|ZP_13375456.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|418833304|ref|ZP_13388234.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|418835228|ref|ZP_13390124.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|418842143|ref|ZP_13396956.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|418843135|ref|ZP_13397934.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|418850066|ref|ZP_13404785.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|418857148|ref|ZP_13411778.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|418861856|ref|ZP_13416406.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
gi|418869018|ref|ZP_13423459.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
gi|392775976|gb|EJA32666.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|392776587|gb|EJA33274.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|392791176|gb|EJA47666.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|392793037|gb|EJA49482.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|392795876|gb|EJA52227.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|392804046|gb|EJA60223.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|392807468|gb|EJA63539.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|392817273|gb|EJA73188.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|392819272|gb|EJA75144.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|392835358|gb|EJA90955.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|392837095|gb|EJA92666.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
gi|392837708|gb|EJA93278.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
Length = 370
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+ NS+ D G +
Sbjct: 155 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLDKDPNSSKAD-DYTGPATDL 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N++ +PK
Sbjct: 214 ---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPK 270
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 271 EGAMAFFDVFAMPADAK 287
>gi|149191935|ref|ZP_01870167.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio shilonii
AK1]
gi|148834240|gb|EDL51245.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio shilonii
AK1]
Length = 345
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 28/214 (13%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALL 77
+ W DLW P+ G++ M++ REV L +G S N+ N D A + L L
Sbjct: 145 VSSWDDLWDPQWEGQLMMMDDSREVFHIALTKLGYSPNTTNPDEIKAA-----YEELRKL 199
Query: 78 ANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 137
+F+S + G+V + + W+ A + +++ +V P+ GA W D AIP
Sbjct: 200 VPNVLVFNSDFPANPYLAGEVSLGMLWNGSAYMARQEGASIDIVWPEKGAIFWMDSLAIP 259
Query: 138 AASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEE 197
+ + K + H+ I+F L+ A E+ P+ ++T LP+E
Sbjct: 260 SGA----KNVDAA--------HKMIDFLLRPENAAKIALEI---GYPTPVKTAYPLLPKE 304
Query: 198 LLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEA 231
+ D N+ PP E++ + + + EA
Sbjct: 305 F-----ANDPNVF---PPQEVMDSGTWQDEVGEA 330
>gi|443472342|ref|ZP_21062371.1| Putrescine ABC transporter putrescine-binding protein PotF
[Pseudomonas pseudoalcaligenes KF707]
gi|442902684|gb|ELS28200.1| Putrescine ABC transporter putrescine-binding protein PotF
[Pseudomonas pseudoalcaligenes KF707]
Length = 364
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 16/132 (12%)
Query: 18 IEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
I+ W ++ PE ++S ++S E+I +VL YMG NS N D +
Sbjct: 152 IDSWAAIFEPENMKKLSQCGVAFLDSADEMIPAVLNYMGLDPNSTNPD-----DYKKAEA 206
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSG 126
L + F S+ Y+ GD+ VA G+S D+ A R +A +PK G
Sbjct: 207 KLMAVRPYVTYFHSSKYIGDLANGDICVAAGFSGDIFQAASRAEEAGKGIEIAYAIPKEG 266
Query: 127 ASLWADLWAIPA 138
+LW D+ A+PA
Sbjct: 267 GNLWFDMLAVPA 278
>gi|398844417|ref|ZP_10601481.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM84]
gi|398254503|gb|EJN39596.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM84]
Length = 312
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
I+ W L+ PE + ++ ++SP E+ ++L YMG S + AG +
Sbjct: 100 IDSWAVLFEPENLKKLKQCGVAFMDSPDELFPAILNYMGMDPRS-----EKAGDYAKAEA 154
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM------SNVAVVVPKSG 126
L L F S+ Y+ GDV VA G+S DV A R VA +PK G
Sbjct: 155 RLLELRPYITYFHSSKYVSDLANGDVCVAFGYSGDVFQAANRAIEAKNGVKVAYSIPKEG 214
Query: 127 ASLWADLWAIP 137
++LW DL AIP
Sbjct: 215 SNLWFDLLAIP 225
>gi|145640471|ref|ZP_01796055.1| spermidine/putrescine-binding periplasmic protein 2 precursor
[Haemophilus influenzae R3021]
gi|145275057|gb|EDK14919.1| spermidine/putrescine-binding periplasmic protein 2 precursor
[Haemophilus influenzae 22.4-21]
Length = 350
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 19/155 (12%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLAL 76
I W DLW+PE G++ M + REV L G S N+ N D++ A ++ L
Sbjct: 151 ITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIKTAYERLE-----KL 205
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
L N A F+S + G+V + + W+ A K ++ V PK GA W D +AI
Sbjct: 206 LPNVAT-FNSDSPEVPYVQGEVAIGMIWNGSAYLAQKENPSLQFVYPKEGAIFWMDNYAI 264
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA 171
P +++ V G H++I+F L+ A
Sbjct: 265 PNSAQ--------NVEG----AHKFIDFLLRPENA 287
>gi|409396641|ref|ZP_11247621.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas sp. Chol1]
gi|409118823|gb|EKM95214.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas sp. Chol1]
Length = 365
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 23/188 (12%)
Query: 16 APIEDWKDLWRPE-----LAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W +++PE A +S ++SP E++ + L Y+G + +S D ++ +
Sbjct: 151 APVDSWDLVFKPENIEKLKACGVSFLDSPTEILPAALHYLGYAPDSGKADELKKAEELFM 210
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
Q + F S+ Y+ G+ VA+G+S D+ A R NV +PK
Sbjct: 211 Q-----IRPHVAYFHSSKYISDLANGETCVAIGYSGDIYQAKARAEEAKNGVNVGYKIPK 265
Query: 125 SGASLWADLWAIPA-ASRLETKQIG-GRVRGPSPL--IHQWIEFCLQTARALPFKQEVI- 179
GA + D+ AIPA A +E + + P + I +++F A + P E I
Sbjct: 266 EGAGSFFDMVAIPADAKNVENAHVFINYLMKPEVMASITDYVQFPNANAASTPLVAEAIR 325
Query: 180 --PGASPS 185
PG PS
Sbjct: 326 TDPGIYPS 333
>gi|194443308|ref|YP_002040117.1| putrescine ABC transporter substrate-binding protein [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|194401971|gb|ACF62193.1| putrescine-binding periplasmic protein [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
Length = 371
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+ NS+ D G +
Sbjct: 156 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLDKDPNSSKAD-DYTGPATDL 214
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ GD VA+GW+ DV A R N++ +PK
Sbjct: 215 ---LLKLRPNIRYFHSSQYINDLANGDTCVAIGWAGDVWQAANRAKEAKNGVNISFSIPK 271
Query: 125 SGASLWADLWAIPAASR 141
GA + D++A+PA ++
Sbjct: 272 EGAMAFFDVFAMPADAK 288
>gi|257421774|ref|ZP_05598764.1| ABC spermidine/putrescine transporter [Enterococcus faecalis X98]
gi|422707167|ref|ZP_16764864.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0043]
gi|257163598|gb|EEU93558.1| ABC spermidine/putrescine transporter [Enterococcus faecalis X98]
gi|315155525|gb|EFT99541.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0043]
Length = 357
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 69/127 (54%), Gaps = 11/127 (8%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNS-NNIDLQVAGGKISVQQN--L 74
I+ W DLWRPEL + +++ REV+G L +G S NS N+ L++A K++ N
Sbjct: 155 IQHWDDLWRPELKNNVMLIDGAREVLGLSLNSLGYSLNSKNDQQLRLATDKLNRLTNNVK 214
Query: 75 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 134
A++A++ +++ + + VAV +S + ++ ++ V+P G++LW D
Sbjct: 215 AIVADEIKMYMANE--------ESAVAVTFSGEAAEMLENNEHLHYVIPSEGSNLWFDNI 266
Query: 135 AIPAASR 141
+P ++
Sbjct: 267 VMPKTAK 273
>gi|241203161|ref|YP_002974257.1| extracellular solute-binding protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240857051|gb|ACS54718.1| extracellular solute-binding protein family 1 [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 365
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 99/222 (44%), Gaps = 41/222 (18%)
Query: 20 DWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQN 73
+W L+ P A + I M++SP +V+ SVL Y+G + NS + DL+ A Q
Sbjct: 155 NWDALFDPAKAAKLKDCGIYMLDSPTDVVPSVLAYLGLNPNSTDAADLKKA------QAV 208
Query: 74 LALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM--SNVAV----VVPKSGA 127
L + R F S+ Y+ A GD+ +A+G+S D+ A R +NV V VP GA
Sbjct: 209 LTAVRPFVRKFHSSEYISALANGDICIALGYSGDMFQARDRAKEANVGVKVDYSVPSQGA 268
Query: 128 SLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSAL 187
++ D++ IP + + H++I + + K EV+ AS
Sbjct: 269 QIFFDVFGIPKDAPHVAEA------------HEFINYMM--------KPEVVAKASNVVF 308
Query: 188 ETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLS 229
K ++ L + DT + P E++A+ + PL
Sbjct: 309 YANGNKASQQFLDKEVLDDTAIY---PTPEVMAKLFTVPPLD 347
>gi|145637462|ref|ZP_01793121.1| spermidine/putrescine-binding periplasmic protein 2 precursor
[Haemophilus influenzae PittHH]
gi|145269408|gb|EDK09352.1| spermidine/putrescine-binding periplasmic protein 2 precursor
[Haemophilus influenzae PittHH]
Length = 350
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 19/155 (12%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLAL 76
I W DLW+PE G++ M + REV L G S N+ N D++ A ++ L
Sbjct: 151 ITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIKTAYERLE-----KL 205
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
L N A F+S + G+V + + W+ A K ++ V PK GA W D +AI
Sbjct: 206 LPNVAT-FNSDSPEVPYVQGEVAIGMIWNGSAYLAQKENPSLQFVYPKEGAIFWMDNYAI 264
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA 171
P +++ V G H++I+F L+ A
Sbjct: 265 PNSAQ--------NVEG----AHKFIDFLLRPENA 287
>gi|77405839|ref|ZP_00782922.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae H36B]
gi|77175549|gb|EAO78335.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae H36B]
Length = 357
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 66/129 (51%), Gaps = 11/129 (8%)
Query: 16 APIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQNL 74
P + W DLWRPE +I +V+S REVIG L +G N+ NI +L+ A K+
Sbjct: 153 TPPKHWDDLWRPEFRNKIMLVDSAREVIGVGLNSLGYGLNTKNISELKAASKKLD----- 207
Query: 75 ALLAN-QARLFDSTHYLKAFGI-GDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWAD 132
AL N +A + D +K + I GD + V +S + + ++ VVP G++LW D
Sbjct: 208 ALTPNVKAIVADE---MKGYMIQGDAAIGVTFSGEAREMLDGNKHLHYVVPSEGSNLWFD 264
Query: 133 LWAIPAASR 141
IP +
Sbjct: 265 NIVIPKTVK 273
>gi|444312665|ref|ZP_21148242.1| extracellular solute-binding protein [Ochrobactrum intermedium M86]
gi|443483958|gb|ELT46783.1| extracellular solute-binding protein [Ochrobactrum intermedium M86]
Length = 367
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 21/153 (13%)
Query: 3 IAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNS 56
I Y K+K ++ I+ W L+ PE + + I +++S E++ L Y+G NS
Sbjct: 139 IGYNKAKIKEALGTDTIDSWAVLFDPEQSAKLKDCGIYLLDSASEMLRPALNYLGLDPNS 198
Query: 57 NN-IDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 114
+ DLQ A Q+L L + R F S+ Y+ A GD+ +AVG+S D+ A R
Sbjct: 199 PSPDDLQKA-------QDLYLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDR 251
Query: 115 MS------NVAVVVPKSGASLWADLWAIPAASR 141
+ +PK GA +W D AIPA ++
Sbjct: 252 AEKAKQGVEIGYSIPKEGALMWFDQMAIPADAK 284
>gi|388468123|ref|ZP_10142333.1| periplasmic putrescine-binding protein [Pseudomonas synxantha
BG33R]
gi|388011703|gb|EIK72890.1| periplasmic putrescine-binding protein [Pseudomonas synxantha
BG33R]
Length = 366
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 18/133 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQ 71
I+ W L+ P+ + ++ ++SP E+ ++L YMG S N D + A K
Sbjct: 154 IDSWAVLFEPDNLKKLHECGVAFLDSPDELFPAILNYMGKDPRSENAEDYKQAEAK---- 209
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
L L F S+ Y+ G++ VA G+S DV A R N+A +P+
Sbjct: 210 --LLTLRPYITYFHSSKYISDLANGNICVAFGYSGDVFQAANRAKEAKNGVNIAYSIPRE 267
Query: 126 GASLWADLWAIPA 138
G++LW DL AIPA
Sbjct: 268 GSNLWFDLLAIPA 280
>gi|430751704|ref|YP_007214612.1| spermidine/putrescine-binding periplasmic protein [Thermobacillus
composti KWC4]
gi|430735669|gb|AGA59614.1| spermidine/putrescine-binding periplasmic protein [Thermobacillus
composti KWC4]
Length = 356
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 102/230 (44%), Gaps = 34/230 (14%)
Query: 21 WKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID-LQVAGGKIS-VQQNL-ALL 77
W LW P L I +V+ RE+IG L +G S N + + LQ A K+ + N+ A++
Sbjct: 157 WDALWDPSLRNDILLVDGAREIIGMGLNSLGYSLNDTDEEHLQEALAKLKRLTPNVKAIV 216
Query: 78 ANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 137
++ ++ + + A AV WS D + ++ VVP+ G++LW D IP
Sbjct: 217 GDEIKMLMTGNEASA--------AVVWSGDAAEIMWENEDLDYVVPEEGSNLWFDSMVIP 268
Query: 138 AASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEE 197
+R + G H +I F L A E + ++P+A T L LPEE
Sbjct: 269 KTAR--------NIEGA----HLFINFMLDPENAAR-NAEYVGYSTPNA--TALEMLPEE 313
Query: 198 LLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVADLQKPA 247
+ +D P E++AR E E L + L+ Y L + + A
Sbjct: 314 I-----REDERF---YPGDELIARLEVYENLGKRMLAYYNDLFLEFKMHA 355
>gi|242239712|ref|YP_002987893.1| putrescine ABC transporter periplasmic-binding protein [Dickeya
dadantii Ech703]
gi|242131769|gb|ACS86071.1| extracellular solute-binding protein family 1 [Dickeya dadantii
Ech703]
Length = 369
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 17 PIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQ 71
P+ W + +PE + +S +++P E+ +VL Y+G NS + +
Sbjct: 155 PVNSWDLVLKPENLEKLKSCGVSFLDAPAEIYATVLNYLGKDPNST----KESDYSKDAT 210
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
L L R F S+ Y+ GD+ VA+GW+ DV+ A R N++ +PK
Sbjct: 211 DLLLKLRPSIRYFHSSQYINDLANGDICVAIGWAGDVMQAANRAKEAKNGVNISYAIPKE 270
Query: 126 GASLWADLWAIPAASR 141
GA + D++AIP ++
Sbjct: 271 GALAFFDVFAIPKDAK 286
>gi|167758404|ref|ZP_02430531.1| hypothetical protein CLOSCI_00744 [Clostridium scindens ATCC 35704]
gi|167664301|gb|EDS08431.1| ABC transporter, solute-binding protein [Clostridium scindens ATCC
35704]
Length = 628
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 96/224 (42%), Gaps = 29/224 (12%)
Query: 17 PIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLAL 76
PI+ W LW + I M +S R+ G LKY+G S NS ++D A K+ ++Q +
Sbjct: 426 PIDSWSVLWDEKYKDNILMQDSVRDAFGVTLKYLGYSLNSTDLDELEAAKKLLIKQKPLV 485
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
QA + D K G + + V +S + + N+ V+PK G+++W D W I
Sbjct: 486 ---QAYVIDQVR-DKMIG-NEAAIGVIYSGEAIYTQWENPNLEYVIPKEGSNVWIDSWVI 540
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEF-CLQTARALPFKQEVIPGASPSALETTLVKLP 195
P ++ + ++I F C + F + I ++P+ L++ P
Sbjct: 541 PKNAKHKENA------------EKFINFICRPDIAKMNF--DYITYSTPNEAGRQLIEDP 586
Query: 196 EELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
L+ P + P E LA CE + L + + Y L
Sbjct: 587 A--LRNSP-------IAFPDPEELANCETFKFLGDENDALYNEL 621
>gi|113461303|ref|YP_719372.1| spermidine/putrescine-binding periplasmic protein [Haemophilus
somnus 129PT]
gi|112823346|gb|ABI25435.1| spermidine/putrescine-binding periplasmic protein [Haemophilus
somnus 129PT]
Length = 361
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 37/232 (15%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IA+ ++++ + W DLW+PE AG++ +++ REV L +G N+ +
Sbjct: 149 IAFNTNEYKGSDFT---SWADLWKPEFAGKVQLLDDAREVFNIALLKLGQDPNTQD---- 201
Query: 63 VAGGKISVQQNLALLANQARL--FDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAV 120
KI Q LL + + F+S + +F G+V + W+ V A K + + +
Sbjct: 202 ---PKIIEQAYEELLKLRPNVLSFNSDNPANSFISGEVSIGQLWNGSVRIAKKEKAPLDM 258
Query: 121 VVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEV-I 179
V PK G LW D AIP+ S + P H+ I + L A E+
Sbjct: 259 VFPKEGPVLWVDTLAIPSTS-----------KNPDA-AHKLINYMLGAKTAAQLTLEIGY 306
Query: 180 PGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEA 231
P ++ ALE LP E+ +QD + P AEIL + + + +A
Sbjct: 307 PTSNIKALEL----LPAEI-----TQDPAI---YPTAEILQNSYWQDDVGDA 346
>gi|339301436|ref|ZP_08650537.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus agalactiae
ATCC 13813]
gi|319745106|gb|EFV97431.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus agalactiae
ATCC 13813]
Length = 357
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 66/129 (51%), Gaps = 11/129 (8%)
Query: 16 APIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQNL 74
P + W DLWRPE +I +V+S REVIG L +G N+ NI +L+ A K+
Sbjct: 153 TPPKHWDDLWRPEFRNKIMLVDSAREVIGVGLNSLGYGLNTKNISELKAASKKLD----- 207
Query: 75 ALLAN-QARLFDSTHYLKAFGI-GDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWAD 132
AL N +A + D +K + I GD + V +S + + ++ VVP G++LW D
Sbjct: 208 ALTPNVKAIVADE---MKGYMIQGDAAIGVTFSGEAREMLDGNKHLHYVVPSEGSNLWFD 264
Query: 133 LWAIPAASR 141
IP +
Sbjct: 265 NIVIPKTVK 273
>gi|440757617|ref|ZP_20936800.1| Putrescine ABC transporter putrescine-binding protein PotF [Pantoea
agglomerans 299R]
gi|436428606|gb|ELP26260.1| Putrescine ABC transporter putrescine-binding protein PotF [Pantoea
agglomerans 299R]
Length = 369
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS++ + +G +
Sbjct: 154 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSDAK-EYSGAATDL 212
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ G++ VA+GWS D+L A R ++ VPK
Sbjct: 213 ---LLKLRPNIRYFHSSQYINDLANGNICVAIGWSGDILQAKNRADAAKNGVHLGYSVPK 269
Query: 125 SGASLWADLWAIPAASR 141
GA + D+ AIP ++
Sbjct: 270 EGALAFFDMMAIPKDAK 286
>gi|331268532|ref|YP_004395024.1| extracellular solute-binding protein [Clostridium botulinum
BKT015925]
gi|329125082|gb|AEB75027.1| Bacterial extracellular solute-binding protein, putative
[Clostridium botulinum BKT015925]
Length = 347
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 63/124 (50%), Gaps = 7/124 (5%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID-LQVAGGKISVQQNLAL 76
I+ W LW P+ +I MV+S R+ I LK +G S N+ N D L+ A ++ Q+ L
Sbjct: 148 IDSWDALWNPKYKDQILMVDSQRDAIAVALKKLGYSINTRNKDELKKAEQELMKQKPLV- 206
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
+A + D L G + AV WS D + +K N+ V+PK G++LW D I
Sbjct: 207 ---RAYVGDEVKDLMVDEEGSI--AVVWSGDAVTMMKNNPNLRYVIPKEGSNLWFDNMVI 261
Query: 137 PAAS 140
P S
Sbjct: 262 PKGS 265
>gi|153812244|ref|ZP_01964912.1| hypothetical protein RUMOBE_02643 [Ruminococcus obeum ATCC 29174]
gi|149831651|gb|EDM86738.1| ABC transporter, solute-binding protein [Ruminococcus obeum ATCC
29174]
Length = 571
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
Query: 17 PIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLAL 76
P++ W LW P+ I M +S R+ G LKY+G S NS ++D + ++Q +
Sbjct: 369 PVDSWSILWDPKYKDNILMQDSVRDAFGVTLKYLGYSLNSIDLDELTEAKNLLIEQKPLV 428
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
QA + D K G + + V +S + + K N+ V+PK G+++W D W I
Sbjct: 429 ---QAYVIDQVR-DKMIG-NEAALGVIYSGEAIYTQKENPNLEYVIPKEGSNIWIDSWVI 483
Query: 137 P 137
P
Sbjct: 484 P 484
>gi|90021014|ref|YP_526841.1| transcription factor jumonji, jmjC [Saccharophagus degradans 2-40]
gi|89950614|gb|ABD80629.1| extracellular solute-binding protein, family 1 [Saccharophagus
degradans 2-40]
Length = 365
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 65/134 (48%), Gaps = 20/134 (14%)
Query: 17 PIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMG--ASYNSNNIDLQVAGGKIS 69
P+ W ++ PE+AG+ IS+++ EV + Y+G AS S VA
Sbjct: 152 PVNTWALIFNPEIAGKLASCGISLMDDATEVFAAAKIYLGIDASDFSKATQEAVAALVAK 211
Query: 70 VQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVP 123
++N+ R F S+ Y+ GD+ VA G+S DVL A R NVA VP
Sbjct: 212 TRKNI-------RYFHSSQYINDLANGDLCVAHGYSGDVLQARARAEEAEKGVNVAYTVP 264
Query: 124 KSGASLWADLWAIP 137
+ GA +W+D+ IP
Sbjct: 265 QEGAVVWSDVMVIP 278
>gi|404483050|ref|ZP_11018275.1| hypothetical protein HMPREF1135_01335 [Clostridiales bacterium
OBRC5-5]
gi|404344140|gb|EJZ70499.1| hypothetical protein HMPREF1135_01335 [Clostridiales bacterium
OBRC5-5]
Length = 366
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 7/110 (6%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQNLAL 76
I+ + DLW PELAG + ++ + R + G LK +G S+N+N++ +Q AG K L
Sbjct: 163 IQGYNDLWNPELAGNVGIIGNYRVIDGITLKSLGYSFNTNDLTQIQEAGDK------LKT 216
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSG 126
LA RL + + G+V A ++S V A+K ++ VV PK G
Sbjct: 217 LAPNIRLINDNNLQDYLLSGEVGAAFMYTSQVTQAIKANPDLKVVYPKEG 266
>gi|16799874|ref|NP_470142.1| hypothetical protein lin0800 [Listeria innocua Clip11262]
gi|16413251|emb|CAC96032.1| lin0800 [Listeria innocua Clip11262]
Length = 357
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 109/245 (44%), Gaps = 37/245 (15%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN-SNNIDL 61
I Y K F N + W L+ PEL +I +++ REV+G L +G S N +N L
Sbjct: 143 IIYNKEMFPDKNF---DTWNALFDPELKNQILLIDGAREVMGLGLNSLGYSLNDTNKSHL 199
Query: 62 QVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVA 119
Q A K+ ++ N+ A++ ++ +L + + + VAV +S + + ++
Sbjct: 200 QAARDKLETMTPNVKAIVGDEIKLLMADN--------EAGVAVTFSGEAAEMLSENEDLE 251
Query: 120 VVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVI 179
V+PK G++LW D IP + K + G H++I F L+ A E +
Sbjct: 252 YVIPKDGSNLWFDNMVIPKTA----KNVDGA--------HKFINFMLKPENA-AINAEYV 298
Query: 180 PGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
A+P+ E + LP+E+ S D P + L E + L + LS Y L
Sbjct: 299 GYATPN--EKAVKLLPKEI-----SGDERF---YPDMDELNNLEVYDNLGKRMLSYYNEL 348
Query: 240 VADLQ 244
+ +
Sbjct: 349 FLEFK 353
>gi|22537266|ref|NP_688117.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Streptococcus agalactiae 2603V/R]
gi|77413025|ref|ZP_00789227.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae 515]
gi|410594609|ref|YP_006951336.1| Spermidine/putrescine-binding periplasmic protein [Streptococcus
agalactiae SA20-06]
gi|421532211|ref|ZP_15978578.1| spermidine/putrescine-binding protein [Streptococcus agalactiae
STIR-CD-17]
gi|22534134|gb|AAM99989.1|AE014242_18 spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae 2603V/R]
gi|77160923|gb|EAO72032.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae 515]
gi|403642577|gb|EJZ03410.1| spermidine/putrescine-binding protein [Streptococcus agalactiae
STIR-CD-17]
gi|410518248|gb|AFV72392.1| Spermidine/putrescine-binding periplasmic protein [Streptococcus
agalactiae SA20-06]
Length = 357
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 66/129 (51%), Gaps = 11/129 (8%)
Query: 16 APIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQNL 74
P + W DLWRPE +I +V+S REVIG L +G N+ NI +L+ A K+
Sbjct: 153 TPPKHWDDLWRPEFRNKIMLVDSAREVIGVGLNSLGYGLNTKNISELKAASKKLD----- 207
Query: 75 ALLAN-QARLFDSTHYLKAFGI-GDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWAD 132
AL N +A + D +K + I GD + V +S + + ++ VVP G++LW D
Sbjct: 208 ALTPNVKAIVADE---MKGYMIQGDAAIGVTFSGEAREMLDGNKHLHYVVPSEGSNLWFD 264
Query: 133 LWAIPAASR 141
IP +
Sbjct: 265 NIVIPKTVK 273
>gi|25011226|ref|NP_735621.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Streptococcus agalactiae NEM316]
gi|76797917|ref|ZP_00780179.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae 18RS21]
gi|77408716|ref|ZP_00785448.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae COH1]
gi|77410532|ref|ZP_00786893.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae CJB111]
gi|421147260|ref|ZP_15606950.1| spermidine/putrescine-binding protein [Streptococcus agalactiae
GB00112]
gi|23095650|emb|CAD46834.1| Unknown [Streptococcus agalactiae NEM316]
gi|76586754|gb|EAO63250.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae 18RS21]
gi|77163480|gb|EAO74430.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae CJB111]
gi|77172691|gb|EAO75828.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae COH1]
gi|401685938|gb|EJS81928.1| spermidine/putrescine-binding protein [Streptococcus agalactiae
GB00112]
Length = 357
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 66/129 (51%), Gaps = 11/129 (8%)
Query: 16 APIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQNL 74
P + W DLWRPE +I +V+S REVIG L +G N+ NI +L+ A K+
Sbjct: 153 TPPKHWDDLWRPEFRNKIMLVDSAREVIGVGLNSLGYGLNTKNISELKAASKKLD----- 207
Query: 75 ALLAN-QARLFDSTHYLKAFGI-GDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWAD 132
AL N +A + D +K + I GD + V +S + + ++ VVP G++LW D
Sbjct: 208 ALTPNVKAIVADE---MKGYMIQGDAAIGVTFSGEAREMLDGNKHLHYVVPSEGSNLWFD 264
Query: 133 LWAIPAASR 141
IP +
Sbjct: 265 NIVIPKTVK 273
>gi|407789477|ref|ZP_11136578.1| spermidine/putrescine-binding periplasmic protein [Gallaecimonas
xiamenensis 3-C-1]
gi|407206835|gb|EKE76785.1| spermidine/putrescine-binding periplasmic protein [Gallaecimonas
xiamenensis 3-C-1]
Length = 347
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 32/216 (14%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALL 77
I WKDL++PE GR+ + + REV L G S N+ + + Q+ K + + L+
Sbjct: 147 ITSWKDLFKPEFKGRLLLTDDVREVFQIGLALNGHSANTTD-EAQI---KQAYETLKPLI 202
Query: 78 ANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 137
AN ++F+S + GDV + + W+ +V A N+A + PK GA W D +A+P
Sbjct: 203 AN-TQVFNSDAPRLPYLSGDVDIGMIWNGEVYMANNEGGNLAYIYPKEGAIFWVDSFAVP 261
Query: 138 AASRLETKQIGGRVRGPSPLIHQWIEFCL--QTARALPFKQEVIPGASPSALETTLVKLP 195
+ P H++I + + + A+A E + A+P+ L LP
Sbjct: 262 S-----------HAEHPDA-AHRFINYMMRPEVAKAC---VEYVGYATPNLPGKAL--LP 304
Query: 196 EELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEA 231
+E LK P V P A +A+ EF + +A
Sbjct: 305 DE-LKNSP-------VIFPDAATVAKGEFQTDVGDA 332
>gi|359798674|ref|ZP_09301245.1| putrescine-binding periplasmic protein [Achromobacter
arsenitoxydans SY8]
gi|359363496|gb|EHK65222.1| putrescine-binding periplasmic protein [Achromobacter
arsenitoxydans SY8]
Length = 361
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 63/129 (48%), Gaps = 18/129 (13%)
Query: 21 WKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQNL 74
W L++PE A + ISM++ +V +VLKY+G NS N D Q A + L
Sbjct: 152 WDMLFKPENAAKLKECGISMLDEAAQVFPAVLKYLGKDPNSTNAADYQAA------MEVL 205
Query: 75 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGAS 128
+ R F S+ Y+ +GD+ + G+S DV+ A KR + V +PK GA
Sbjct: 206 KKIRPYIRQFSSSGYIDELAVGDLCMVYGFSGDVMIARKRAQDAKKPYEVNYFIPKGGAP 265
Query: 129 LWADLWAIP 137
W DL IP
Sbjct: 266 AWFDLMVIP 274
>gi|384513985|ref|YP_005709078.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecalis
OG1RF]
gi|430358128|ref|ZP_19425232.1| ABC spermidine/putrescine transporter [Enterococcus faecalis OG1X]
gi|430366431|ref|ZP_19427499.1| ABC spermidine/putrescine transporter [Enterococcus faecalis M7]
gi|327535874|gb|AEA94708.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecalis
OG1RF]
gi|429513934|gb|ELA03508.1| ABC spermidine/putrescine transporter [Enterococcus faecalis OG1X]
gi|429517073|gb|ELA06542.1| ABC spermidine/putrescine transporter [Enterococcus faecalis M7]
Length = 357
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 69/127 (54%), Gaps = 11/127 (8%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNS-NNIDLQVAGGKISVQQN--L 74
I+ W DLWRPEL + +++ REV+G L +G S NS N+ L++A K++ N
Sbjct: 155 IQHWDDLWRPELKNNVMLIDGAREVLGLSLNSLGYSLNSKNDQQLRLATDKLNRLTNNVK 214
Query: 75 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 134
A++A++ +++ + + VAV +S + ++ ++ V+P G++LW D
Sbjct: 215 AIVADEIKMYMANE--------ESAVAVTFSGEAAEMLENNEHLHYVIPSEGSNLWFDNI 266
Query: 135 AIPAASR 141
+P ++
Sbjct: 267 VMPKTAK 273
>gi|422734632|ref|ZP_16790920.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX1341]
gi|315168636|gb|EFU12653.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX1341]
Length = 357
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 68/127 (53%), Gaps = 11/127 (8%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNS-NNIDLQVAGGKISVQQN--L 74
I+ W DLWRPEL + +++ REV+G L +G S NS N+ L+ A K++ N
Sbjct: 155 IQHWDDLWRPELKNNVMLIDGAREVLGLSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVK 214
Query: 75 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 134
A++A++ +++ + + VAV +S + ++ ++ V+P G++LW D
Sbjct: 215 AIVADEIKMYMANE--------ESAVAVTFSGEAAEMLENNEHLHYVIPSEGSNLWFDNI 266
Query: 135 AIPAASR 141
IP ++
Sbjct: 267 VIPKTAK 273
>gi|424925503|ref|ZP_18348864.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
gi|404306663|gb|EJZ60625.1| Spermidine/putrescine-binding periplasmic protein [Pseudomonas
fluorescens R124]
Length = 365
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 66/135 (48%), Gaps = 18/135 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W L+ PE + ++ ++S E++ +VL YMG + NS N D A K
Sbjct: 153 IDSWSVLFEPENIKKLHSCGVAFLDSADEMMPTVLNYMGLNANSTNPKDYAKATDK---- 208
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPA------VKRMSNVAVVVPKS 125
L + F S+ Y+ GD+ VA+G+S D+ A K+ N+A +PK
Sbjct: 209 --LLAVRPYVTYFHSSKYIGDLANGDICVAIGFSGDIFQAKHRAEEAKKGVNIAYSIPKE 266
Query: 126 GASLWADLWAIPAAS 140
G +LW D+ AIP S
Sbjct: 267 GGALWFDMLAIPKDS 281
>gi|227820909|ref|YP_002824879.1| spermidine/putrescine ABC transporter substrate-binding protein
[Sinorhizobium fredii NGR234]
gi|227339908|gb|ACP24126.1| spermidine/putrescine ABC transporter, periplasmic
substrate-binding protein [Sinorhizobium fredii NGR234]
Length = 364
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 98/221 (44%), Gaps = 41/221 (18%)
Query: 20 DWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQN 73
+W ++ PE+A + I +++SP ++I S L Y+G + +S++ DL+ A
Sbjct: 154 NWDVIFNPEIAAKFKDCGIHLLDSPTDIIPSALAYLGLNPDSHDPADLEKAA------DV 207
Query: 74 LALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGA 127
L + R F S+ Y+ A GD+ +AVG+S D+ A R + V +P GA
Sbjct: 208 LLKVRPYIRKFHSSEYINALANGDICLAVGFSGDIFQARDRAAEAKAGVTVDYSIPAQGA 267
Query: 128 SLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSAL 187
+W D+ A+PA + + H++I F + K EVI AS
Sbjct: 268 QMWFDMLAMPADAPHVAEA------------HEFINFMM--------KPEVIAKASNYVF 307
Query: 188 ETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPL 228
K ++ L + +DT + P +++ + + P
Sbjct: 308 YANGNKASQQFLDREVLEDTAI---YPTDDVMQKLFTVTPF 345
>gi|222084921|ref|YP_002543450.1| spermidine/putrescine ABC transporter [Agrobacterium radiobacter
K84]
gi|221722369|gb|ACM25525.1| spermidine/putrescine ABC transporter [Agrobacterium radiobacter
K84]
Length = 374
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 66/127 (51%), Gaps = 18/127 (14%)
Query: 24 LWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALL 77
++ P LA + I +++SP +VI + L+Y+G NS D + A ++ L +
Sbjct: 168 IFDPALAAKFKDCGIYVLDSPTDVIPAALRYLGLDPNSTKPEDFKKA------EELLTAV 221
Query: 78 ANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWA 131
R F S+ Y+ A GD+ + G+S DVL A R + N++ +PK GA +W
Sbjct: 222 RPNIRKFHSSEYINALANGDICLTFGYSGDVLQARNRAAEAKNGINISYSIPKKGAQMWF 281
Query: 132 DLWAIPA 138
D+ AIPA
Sbjct: 282 DVMAIPA 288
>gi|398878302|ref|ZP_10633427.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM67]
gi|398882495|ref|ZP_10637462.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM60]
gi|398198647|gb|EJM85601.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM60]
gi|398200559|gb|EJM87470.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM67]
Length = 365
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W ++ PE + ++ ++S E++ +VL YMG + NS N D + A K
Sbjct: 153 IDSWSAVFEPENIKKLQSCGVAFLDSADEMMPTVLNYMGLNANSTNPEDYKKAEAK---- 208
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
L + F S+ Y+ GD+ +A+G+S D+ A R + N+A +PK
Sbjct: 209 --LLAVRPYVTYFHSSKYIADLANGDICIAIGFSGDMFQARNRAAEAKKGVNIAYTIPKE 266
Query: 126 GASLWADLWAIPAAS 140
G +LW D+ AIP S
Sbjct: 267 GGALWFDMLAIPKDS 281
>gi|333898571|ref|YP_004472444.1| extracellular solute-binding protein [Pseudomonas fulva 12-X]
gi|333113836|gb|AEF20350.1| extracellular solute-binding protein family 1 [Pseudomonas fulva
12-X]
Length = 364
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 17/147 (11%)
Query: 3 IAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNS 56
I Y +K ++ + I+ W L+ P+ + +S ++S EVI SVL Y+G NS
Sbjct: 136 IGYNVAKVKEVLGVDKIDSWAVLFEPQNMKKLASCGVSFMDSADEVIPSVLNYLGLDPNS 195
Query: 57 NNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS 116
Q A + L + F S+ Y+ G++ VA G+S DVL A R +
Sbjct: 196 -----QSADDYAKAEAKLMEVRPYISYFHSSKYISDLANGNICVAFGYSGDVLQAADRAA 250
Query: 117 N------VAVVVPKSGASLWADLWAIP 137
+A +PK GA+LW D+ AIP
Sbjct: 251 EAGKGVEIAYAIPKEGANLWFDMLAIP 277
>gi|170289243|ref|YP_001739481.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Thermotoga sp.
RQ2]
gi|170176746|gb|ACB09798.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Thermotoga sp.
RQ2]
Length = 336
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 38/214 (17%)
Query: 21 WKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLAN 79
W R +L GR+++++ REV+G+ LKY+G S N+ N +L+ A Q L N
Sbjct: 145 WSIFDREDLRGRMTLLDDMREVLGAALKYLGYSVNTKNPKELEEAK-----QVVLRWKKN 199
Query: 80 QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV--KRMSNVAVVVPKSGASLWADLWAIP 137
A+ FD++ Y + WV G++ DV + +PK G +LW D IP
Sbjct: 200 IAK-FDASSYADGVVSDEYWVVHGYAEDVYQRIPEGEEEYFDFFIPKEGGTLWIDNMVIP 258
Query: 138 AASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEE 197
++ L +++I F L+ A A + LP
Sbjct: 259 KGAK------------NVDLAYKFINFILEPENA--------------AKIADYLGLPSP 292
Query: 198 LLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEA 231
++ + T I + E L CEF+E + EA
Sbjct: 293 NVEARKYMQTEPIYTI---EDLKNCEFIEDVGEA 323
>gi|313889474|ref|ZP_07823122.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Streptococcus pseudoporcinus SPIN 20026]
gi|416851513|ref|ZP_11908658.1| ABC transporter, solute-binding protein [Streptococcus
pseudoporcinus LQ 940-04]
gi|313122306|gb|EFR45397.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Streptococcus pseudoporcinus SPIN 20026]
gi|356739002|gb|EHI64234.1| ABC transporter, solute-binding protein [Streptococcus
pseudoporcinus LQ 940-04]
Length = 357
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 68/127 (53%), Gaps = 13/127 (10%)
Query: 21 WKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID-LQVAGGKI-SVQQNL-ALL 77
WKDLWRPE +I +V+ RE++G L G S NS N+D L+ A ++ ++ N+ A++
Sbjct: 158 WKDLWRPEYKDKIMLVDGAREMLGVGLTTFGNSVNSKNMDQLKAAEKRLQTLTSNIKAIV 217
Query: 78 ANQARLFDSTHYLKAFGI-GDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
A++ +K + I GD + V +S + + ++ VVP G++LW D +
Sbjct: 218 ADE---------MKGYMIQGDAAIGVTFSGEASEMLANNKHLHYVVPTEGSNLWFDNLVL 268
Query: 137 PAASRLE 143
P + E
Sbjct: 269 PKTMKHE 275
>gi|265984646|ref|ZP_06097381.1| extracellular solute-binding protein family 1 [Brucella sp. 83/13]
gi|306837729|ref|ZP_07470597.1| putrescine-binding periplasmic protein [Brucella sp. NF 2653]
gi|306844613|ref|ZP_07477200.1| putrescine-binding periplasmic protein [Brucella inopinata BO1]
gi|264663238|gb|EEZ33499.1| extracellular solute-binding protein family 1 [Brucella sp. 83/13]
gi|306275057|gb|EFM56820.1| putrescine-binding periplasmic protein [Brucella inopinata BO1]
gi|306407185|gb|EFM63396.1| putrescine-binding periplasmic protein [Brucella sp. NF 2653]
Length = 367
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 21/153 (13%)
Query: 3 IAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNS 56
I Y K+K ++ I+ W L+ PE + + I +++S E++ L Y+G NS
Sbjct: 139 IGYNKAKIKEALGTDTIDSWDVLFDPEKSAKLKDCGIYLLDSASEMLRPALNYLGLDPNS 198
Query: 57 NN-IDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 114
+ DLQ A Q+L L + R F S+ Y+ A GD+ +AVG+S D+ A R
Sbjct: 199 PSPDDLQKA-------QDLYLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDR 251
Query: 115 MS------NVAVVVPKSGASLWADLWAIPAASR 141
+ +PK GA +W D AIPA ++
Sbjct: 252 AEKAKQGVEIGYSIPKEGALIWFDQMAIPADAK 284
>gi|388543373|ref|ZP_10146664.1| extracellular solute-binding protein [Pseudomonas sp. M47T1]
gi|388278685|gb|EIK98256.1| extracellular solute-binding protein [Pseudomonas sp. M47T1]
Length = 362
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 64/132 (48%), Gaps = 16/132 (12%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
I+ W L+ PE + +SM++S EV+ +VL YMG S+ + V+
Sbjct: 150 IDSWAVLFEPENMKKLSKCGVSMMDSADEVMPAVLNYMGMDPRSSKPE-----DYAKVKA 204
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSG 126
L + F S+ Y+ G++ VA G+S DV A R ++A +PK G
Sbjct: 205 KLKAVRPYVTYFHSSKYVSDLANGNICVAFGYSGDVFQAANRAKEAKNGIHIAYAIPKEG 264
Query: 127 ASLWADLWAIPA 138
A+LW DL AIPA
Sbjct: 265 ANLWFDLLAIPA 276
>gi|398381287|ref|ZP_10539397.1| spermidine/putrescine-binding periplasmic protein [Rhizobium sp.
AP16]
gi|397719592|gb|EJK80159.1| spermidine/putrescine-binding periplasmic protein [Rhizobium sp.
AP16]
Length = 365
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 66/127 (51%), Gaps = 18/127 (14%)
Query: 24 LWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALL 77
++ P LA + I +++SP +VI + L+Y+G NS D + A ++ L +
Sbjct: 159 IFDPALAAKFKDCGIYVLDSPTDVIPAALRYLGLDPNSTKPEDFKKA------EELLTAV 212
Query: 78 ANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWA 131
R F S+ Y+ A GD+ + G+S DVL A R + N++ +PK GA +W
Sbjct: 213 RPNIRKFHSSEYINALANGDICLTFGYSGDVLQARNRAAEAKNGINISYSIPKKGAQMWF 272
Query: 132 DLWAIPA 138
D+ AIPA
Sbjct: 273 DVMAIPA 279
>gi|170717837|ref|YP_001784897.1| extracellular solute-binding protein [Haemophilus somnus 2336]
gi|168825966|gb|ACA31337.1| extracellular solute-binding protein family 1 [Haemophilus somnus
2336]
Length = 361
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 12/141 (8%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IA+ ++++ + W DLW+PE AG++ +++ REV L +G N+ +
Sbjct: 149 IAFNTNEYKGSDFT---SWADLWKPEFAGKVQLLDDAREVFNIALLKLGQDPNTQD---- 201
Query: 63 VAGGKISVQQNLALLANQARL--FDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAV 120
KI Q LL + + F+S + +F G+V + W+ V A K + + +
Sbjct: 202 ---PKIIEQAYEELLKLRPNVLSFNSDNPANSFISGEVSIGQLWNGSVRIAKKEKAPLDM 258
Query: 121 VVPKSGASLWADLWAIPAASR 141
V PK G LW D AIP+ S+
Sbjct: 259 VFPKEGPVLWVDTLAIPSTSK 279
>gi|104773746|ref|YP_618726.1| spermidine/putrescine ABC transporter substrate-binding protein
[Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
gi|103422827|emb|CAI97479.1| Spermidine/putrescine ABC transporter, substratebinding protein
[Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
Length = 360
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 105/235 (44%), Gaps = 34/235 (14%)
Query: 16 APIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN-SNNIDLQVAGGKIS-VQQN 73
I+ W DLW+ + G+I +V+S R+++G L MG S N +N+ L+ A K+ + +N
Sbjct: 155 GEIKSWNDLWKKKYQGQILLVDSARDIMGMSLVSMGYSMNDTNSAHLKAAKAKLDKIGKN 214
Query: 74 L-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWAD 132
+ A++A++ +++ + + W+ V +S + + + S++ VVP G++LW D
Sbjct: 215 VKAIVADELKMYMVQN--------EAWIGVTYSGEAAMMMDQDSHIHYVVPAQGSNLWFD 266
Query: 133 LWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLV 192
IP + +++I F L+ A E I ++P+ L
Sbjct: 267 NIVIPKTCK------------NKEAAYKFINFMLEPKNAAQ-NAEYIGYSTPNTAAQKL- 312
Query: 193 KLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVADLQKPA 247
LP+ + + K PP + E L + + +Y L + + A
Sbjct: 313 -LPKSVREDKQF--------YPPMSTVKNLEVYRDLPSSKVQEYNDLFLEFKMYA 358
>gi|440225582|ref|YP_007332673.1| putative putrescine ABC transporter, substrate-binding protein
[Rhizobium tropici CIAT 899]
gi|440037093|gb|AGB70127.1| putative putrescine ABC transporter, substrate-binding protein
[Rhizobium tropici CIAT 899]
Length = 365
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 18/127 (14%)
Query: 24 LWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQNLALL 77
++ P+LA + I +++SP +VI + L+Y+G NS D + A + L +
Sbjct: 159 IFDPKLAAKFKDCGIYVLDSPTDVIPAALRYLGLDPNSTKQEDFKKA------EDLLTAI 212
Query: 78 ANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWA 131
R F S+ Y+ A GD+ +A G+S DVL A R + N+A +P GA +W
Sbjct: 213 RPFVRKFHSSEYINALANGDICLAFGYSGDVLQARNRAAEAKNGVNIAYSIPTKGAQMWF 272
Query: 132 DLWAIPA 138
D+ AIPA
Sbjct: 273 DVMAIPA 279
>gi|27365895|ref|NP_761423.1| ABC transporter periplasmic spermidine putrescine-binding protein
potD [Vibrio vulnificus CMCP6]
gi|27362044|gb|AAO10950.1| ABC transporter, periplasmic spermidine putrescine-binding protein
potD [Vibrio vulnificus CMCP6]
Length = 345
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 96/216 (44%), Gaps = 28/216 (12%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALL 77
+++W DLW + AG++ +++ REV L +G S N+ N D A + L L
Sbjct: 145 VKNWGDLWDTQWAGQLMLMDDAREVFHIALSKLGYSPNTTNPDEIKAA-----YEELKKL 199
Query: 78 ANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 137
+F+S + G+V + + W+ A + + + ++ P+ GA W D AIP
Sbjct: 200 IPNVLVFNSDFPANPYLAGEVSLGMLWNGSAYMARQEGAKIDIIWPEKGAIFWMDSLAIP 259
Query: 138 AASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEE 197
A ++ + H+ I+F L+ A E+ P+ ++T LP+E
Sbjct: 260 AGAK------------NTEAAHKMIDFLLRPENAAKIAMEI---GYPTPVKTAYKLLPKE 304
Query: 198 LLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATL 233
++D N+ PP ++ + + + EA++
Sbjct: 305 F-----AEDQNIF---PPQSVMDNGVWQDEVGEASV 332
>gi|119512455|ref|ZP_01631537.1| periplasmic polyamine-binding protein of ABC transporter [Nodularia
spumigena CCY9414]
gi|119462921|gb|EAW43876.1| periplasmic polyamine-binding protein of ABC transporter [Nodularia
spumigena CCY9414]
Length = 244
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID 60
VI Y + K + P +DW DLWR L RIS+V+ REVIG VLK +G SYN+ N+D
Sbjct: 184 VIVYNRQKLQSLGWTP-QDWSDLWRDGLQERISIVDQSREVIGLVLKKLGESYNTENLD 241
>gi|126665279|ref|ZP_01736261.1| Spermidine/putrescine-binding periplasmic protein [Marinobacter sp.
ELB17]
gi|126629907|gb|EBA00523.1| Spermidine/putrescine-binding periplasmic protein [Marinobacter sp.
ELB17]
Length = 348
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 28/211 (13%)
Query: 12 KHNLAP--IEDWKDLWRP--ELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGK 67
+ +L P + W DL +P EL G+ISM+ ++IG LK +G S NS N D
Sbjct: 137 RQDLVPFAVSSWMDLLQPVEELHGKISMIGDRADMIGVALKALGYSLNSTNED------- 189
Query: 68 ISVQQNLALLANQARLFDSTHYL-----KAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVV 122
+++ ALL QA ++ YL A G V +++ ++ D + N+A V+
Sbjct: 190 -EMKEAEALLEAQAPAVNTYRYLSLNEDSALLTGQVVMSMMYNGDTRMLQEYNDNIAFVL 248
Query: 123 PKSGASLWADLWAIPAAS--RLETKQIGGRVRGP--SPLIHQWIEFC---LQTARALP-- 173
PK G ++W D ++ +AS + E K+ + P + + Q++ + L LP
Sbjct: 249 PKEGGNIWTDYLSVLSASHRKAEAKRFINFLNEPEIAARLAQYVYYATPNLAAEALLPVD 308
Query: 174 FKQEVIPGASPSALETTLV--KLPEELLKGK 202
F+ + + S ALE + V +LP K +
Sbjct: 309 FRNDPVIYPSGEALENSEVYRRLPPRAHKNR 339
>gi|260565904|ref|ZP_05836374.1| extracellular solute-binding protein family 1 [Brucella suis bv. 4
str. 40]
gi|260155422|gb|EEW90502.1| extracellular solute-binding protein family 1 [Brucella suis bv. 4
str. 40]
Length = 374
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 74/153 (48%), Gaps = 21/153 (13%)
Query: 3 IAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNS 56
I Y K+K ++ I+ W L+ PE + I +++S E++ L Y+G NS
Sbjct: 146 IGYNKAKIKEALGTDTIDSWDVLFDPEKTAKLKDCGIYLLDSASEMLRPALNYLGLDPNS 205
Query: 57 NN-IDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 114
+ DLQ A Q+L L + R F S+ Y+ A GD+ +AVG+S D+ A R
Sbjct: 206 PSPDDLQKA-------QDLYLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDR 258
Query: 115 MS------NVAVVVPKSGASLWADLWAIPAASR 141
+ +PK GA +W D AIPA ++
Sbjct: 259 AEKAKQGVEIGYSIPKEGALIWFDQMAIPADAK 291
>gi|220928335|ref|YP_002505244.1| family 1 extracellular solute-binding protein [Clostridium
cellulolyticum H10]
gi|219998663|gb|ACL75264.1| extracellular solute-binding protein family 1 [Clostridium
cellulolyticum H10]
Length = 350
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 103/236 (43%), Gaps = 35/236 (14%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID-L 61
I Y K+ ++ P++ W LW + +I M++S R+ IG LK +G S N+ N D L
Sbjct: 140 IIYNKTMVKE----PVDSWNILWDKKYDKQIFMLDSLRDSIGVTLKKLGYSLNTKNKDEL 195
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ A ++ Q+++ QA + D G +AV WS D + + ++ V
Sbjct: 196 ERAKNELIKQKDIV----QAYVGDEVKDKMIMDEG--AMAVVWSGDAVYMKSQNKDLEYV 249
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
+PK G++LW D IP+ ++ + + +I F +T AL + G
Sbjct: 250 IPKEGSNLWFDSMVIPSNAKHQKEA------------EDFINFMCETEIALENTNYI--G 295
Query: 182 ASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
S E K+ LLK I P E + CE L +A++ DY+
Sbjct: 296 YSTPQTEAKK-KVAPALLKD--------ITAYPTDEQIKNCEVFIDL-DASIKDYD 341
>gi|260565177|ref|ZP_05835661.1| extracellular solute-binding protein family 1 [Brucella melitensis
bv. 1 str. 16M]
gi|261758783|ref|ZP_06002492.1| extracellular solute-binding protein family 1 [Brucella sp. F5/99]
gi|265999360|ref|ZP_06111663.1| extracellular solute-binding protein [Brucella melitensis bv. 2
str. 63/9]
gi|297248873|ref|ZP_06932591.1| putrescine transport system substrate-binding protein [Brucella
abortus bv. 5 str. B3196]
gi|260151245|gb|EEW86339.1| extracellular solute-binding protein family 1 [Brucella melitensis
bv. 1 str. 16M]
gi|261738767|gb|EEY26763.1| extracellular solute-binding protein family 1 [Brucella sp. F5/99]
gi|263093442|gb|EEZ17492.1| extracellular solute-binding protein [Brucella melitensis bv. 2
str. 63/9]
gi|297176042|gb|EFH35389.1| putrescine transport system substrate-binding protein [Brucella
abortus bv. 5 str. B3196]
Length = 374
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 74/153 (48%), Gaps = 21/153 (13%)
Query: 3 IAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNS 56
I Y K+K ++ I+ W L+ PE + I +++S E++ L Y+G NS
Sbjct: 146 IGYNKAKIKEALGTDTIDSWDVLFDPEKTAKLKDCGIYLLDSASEMLRPALNYLGLDPNS 205
Query: 57 NN-IDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 114
+ DLQ A Q+L L + R F S+ Y+ A GD+ +AVG+S D+ A R
Sbjct: 206 PSPDDLQKA-------QDLYLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDR 258
Query: 115 MS------NVAVVVPKSGASLWADLWAIPAASR 141
+ +PK GA +W D AIPA ++
Sbjct: 259 AEKAKQGVEIGYSIPKEGALIWFDQMAIPADAK 291
>gi|399008900|ref|ZP_10711351.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM17]
gi|398114411|gb|EJM04232.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM17]
Length = 362
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 19/149 (12%)
Query: 3 IAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNS 56
I Y K ++ + I+ W + PE + +SM++SP EV +VL YMG S
Sbjct: 134 IGYNVDKVKQVLGIDSIDSWAVFFEPENLKKLSQCGVSMMDSPDEVFPAVLNYMGLDPRS 193
Query: 57 NN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM 115
N D + A K L + F S+ Y+ G++ +A G+S DV A R
Sbjct: 194 ENPADYKKAEAK------LLAIRPYITYFHSSKYVSDLANGNICLAFGYSGDVFQAANRA 247
Query: 116 SN------VAVVVPKSGASLWADLWAIPA 138
+A +PK G++LW DL AIPA
Sbjct: 248 KEAKNGVKIAYSIPKEGSNLWFDLLAIPA 276
>gi|293604424|ref|ZP_06686831.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Achromobacter piechaudii ATCC 43553]
gi|292817301|gb|EFF76375.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Achromobacter piechaudii ATCC 43553]
Length = 367
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
+ +W +++PE A + ISM++ +V +VLKY+G NS N D A +
Sbjct: 155 LANWDMIFKPENAAKLKECGISMLDEAAQVFPAVLKYLGKDPNSTNADDYKAALDV---- 210
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSG 126
L + R F S+ Y+ +GD+ + G+S DV+ A KR V +PK G
Sbjct: 211 -LKQIRPYIRQFSSSGYIDELAVGDLCMVYGFSGDVMIARKRAQEAKKSYEVNYFIPKGG 269
Query: 127 ASLWADLWAIP 137
A W DL IP
Sbjct: 270 APAWFDLMVIP 280
>gi|225628044|ref|ZP_03786080.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|225617207|gb|EEH14253.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
Length = 381
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 74/153 (48%), Gaps = 21/153 (13%)
Query: 3 IAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNS 56
I Y K+K ++ I+ W L+ PE + I +++S E++ L Y+G NS
Sbjct: 153 IGYNKAKIKEALGTDTIDSWDVLFDPEKTAKLKDCGIYLLDSASEMLRPALNYLGLDPNS 212
Query: 57 NN-IDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 114
+ DLQ A Q+L L + R F S+ Y+ A GD+ +AVG+S D+ A R
Sbjct: 213 PSPDDLQKA-------QDLYLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDR 265
Query: 115 MS------NVAVVVPKSGASLWADLWAIPAASR 141
+ +PK GA +W D AIPA ++
Sbjct: 266 AEKAKQGVEIGYSIPKEGALIWFDQMAIPADAK 298
>gi|189024715|ref|YP_001935483.1| spermidine/putrescine ABC transporter periplasmic protein [Brucella
abortus S19]
gi|237815998|ref|ZP_04594995.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|189020287|gb|ACD73009.1| hypothetical spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Brucella abortus
S19]
gi|237789296|gb|EEP63507.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
Length = 381
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 74/153 (48%), Gaps = 21/153 (13%)
Query: 3 IAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNS 56
I Y K+K ++ I+ W L+ PE + I +++S E++ L Y+G NS
Sbjct: 153 IGYNKAKIKEALGTDTIDSWDVLFDPEKTAKLKDCGIYLLDSASEMLRPALNYLGLDPNS 212
Query: 57 NN-IDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 114
+ DLQ A Q+L L + R F S+ Y+ A GD+ +AVG+S D+ A R
Sbjct: 213 PSPDDLQKA-------QDLYLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDR 265
Query: 115 MS------NVAVVVPKSGASLWADLWAIPAASR 141
+ +PK GA +W D AIPA ++
Sbjct: 266 AEKAKQGVEIGYSIPKEGALIWFDQMAIPADAK 298
>gi|397688814|ref|YP_006526133.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
stutzeri DSM 10701]
gi|395810370|gb|AFN79775.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri DSM 10701]
Length = 361
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 16/135 (11%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
++ W ++ PE A + I+ ++S E+I ++L Y+G NS N D +
Sbjct: 149 VDSWAVIFEPENAKKLAGCGIAFLDSADEMIPAMLNYLGLDPNSENPD-----DYAKAEA 203
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSG 126
L + R F S+ Y+ G++ +A G+S DV A R ++A +PK G
Sbjct: 204 KLLEVRPYVRYFHSSKYVSDLANGNICIAAGFSGDVFQAAARADEAGKGIDIAYAIPKEG 263
Query: 127 ASLWADLWAIPAASR 141
+LW D+ AIPA ++
Sbjct: 264 GNLWFDMLAIPADAQ 278
>gi|383787305|ref|YP_005471874.1| spermidine/putrescine-binding periplasmic protein [Fervidobacterium
pennivorans DSM 9078]
gi|383110152|gb|AFG35755.1| spermidine/putrescine-binding periplasmic protein [Fervidobacterium
pennivorans DSM 9078]
Length = 341
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 65/125 (52%), Gaps = 11/125 (8%)
Query: 14 NLAPIEDWKDLW----RPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKIS 69
N ++D++ W R +L G++++++ REV G+ LKY+G S N+ N D ++ K
Sbjct: 139 NKKYLKDYEKSWSIYERADLKGKMTLLDDMREVFGAALKYLGYSVNTTNPD-EIEQAK-- 195
Query: 70 VQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV--KRMSNVAVVVPKSGA 127
Q L N + FD+T Y + G+ WV G+ +V + + + N VPK G
Sbjct: 196 -QVILKWKENIVK-FDATTYAQGVVNGEFWVVHGYPENVFQLIPEEDLENFEFFVPKEGG 253
Query: 128 SLWAD 132
+LW D
Sbjct: 254 TLWID 258
>gi|260547020|ref|ZP_05822759.1| extracellular solute-binding protein family 1 [Brucella abortus
NCTC 8038]
gi|260096070|gb|EEW79947.1| extracellular solute-binding protein family 1 [Brucella abortus
NCTC 8038]
Length = 374
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 74/153 (48%), Gaps = 21/153 (13%)
Query: 3 IAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNS 56
I Y K+K ++ I+ W L+ PE + I +++S E++ L Y+G NS
Sbjct: 146 IGYNKAKIKEALGTDTIDSWDVLFDPEKTAKLKDCGIYLLDSASEMLRPALNYLGLDPNS 205
Query: 57 NN-IDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 114
+ DLQ A Q+L L + R F S+ Y+ A GD+ +AVG+S D+ A R
Sbjct: 206 PSPDDLQKA-------QDLYLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDR 258
Query: 115 MS------NVAVVVPKSGASLWADLWAIPAASR 141
+ +PK GA +W D AIPA ++
Sbjct: 259 AEKAKQGVEIGYSIPKEGALIWFDQMAIPADAK 291
>gi|407776772|ref|ZP_11124044.1| extracellular solute-binding protein [Nitratireductor pacificus
pht-3B]
gi|407301468|gb|EKF20588.1| extracellular solute-binding protein [Nitratireductor pacificus
pht-3B]
Length = 365
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 17/148 (11%)
Query: 3 IAYKKSKFRKHNLAP-IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNS 56
I Y +K + P I+ W L++PE+A + I M++S EV+ + L Y G + N+
Sbjct: 137 IGYNAAKAEEILGTPKIDTWDVLFQPEVAAKFKDCGIHMLDSASEVVRAALIYQGLNPNT 196
Query: 57 NNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS 116
+ D ++ L + R F S+ Y+ GD+ +A+G+S D+ A R +
Sbjct: 197 PSAD-----DLARAEELLTAVRPNVRKFHSSEYINGLANGDICLALGYSGDIFQARDRAA 251
Query: 117 N------VAVVVPKSGASLWADLWAIPA 138
V +PK GA LW D AIPA
Sbjct: 252 EADQGVAVGYAIPKEGALLWFDQMAIPA 279
>gi|52424864|ref|YP_088001.1| PotD protein [Mannheimia succiniciproducens MBEL55E]
gi|52306916|gb|AAU37416.1| PotD protein [Mannheimia succiniciproducens MBEL55E]
Length = 382
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 9/140 (6%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IAY ++ + W DLW+PE AG++ +++ REV L +G + N+ +
Sbjct: 169 IAYNTQTYKGSDFT---SWGDLWKPEFAGKVQLLDDAREVFNIALLKLGKNPNTQD---- 221
Query: 63 VAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM-SNVAVV 121
A K + ++ L L N F+S + AF G+V V W+ V A K ++ ++
Sbjct: 222 PAEIKAAYEELLKLRPN-VLSFNSDNPANAFISGEVEVGQLWNGSVRIAKKEQPGSIDMI 280
Query: 122 VPKSGASLWADLWAIPAASR 141
PK G LW D AIPA S+
Sbjct: 281 FPKEGPVLWVDNLAIPATSK 300
>gi|261219731|ref|ZP_05934012.1| extracellular solute-binding protein family 1 [Brucella ceti
M13/05/1]
gi|261322621|ref|ZP_05961818.1| extracellular solute-binding protein family 1 [Brucella ceti
M644/93/1]
gi|260924820|gb|EEX91388.1| extracellular solute-binding protein family 1 [Brucella ceti
M13/05/1]
gi|261295311|gb|EEX98807.1| extracellular solute-binding protein family 1 [Brucella ceti
M644/93/1]
Length = 367
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 74/153 (48%), Gaps = 21/153 (13%)
Query: 3 IAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNS 56
I Y K+K ++ I+ W L+ PE + I +++S E++ L Y+G NS
Sbjct: 139 IGYNKAKIKEALGTDTIDSWDVLFDPEKTAKLKDCGIYLLDSASEMLRPALNYLGLDPNS 198
Query: 57 NN-IDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 114
+ DLQ A Q+L L + R F S+ Y+ A GD+ +AVG+S D+ A R
Sbjct: 199 PSPDDLQKA-------QDLYLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDR 251
Query: 115 MS------NVAVVVPKSGASLWADLWAIPAASR 141
+ +PK GA +W D AIPA ++
Sbjct: 252 AEKAKQGVEIGYSIPKEGALIWFDQMAIPADAK 284
>gi|402701746|ref|ZP_10849725.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
fragi A22]
Length = 362
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 17/151 (11%)
Query: 3 IAYKKSKFRK-HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNS 56
I Y K ++ + I+ W L+ PE + ++ ++S EV+ S+L Y+G S
Sbjct: 134 IGYNVDKVKQVLGIDKIDSWSVLFEPENLKKLKSCGVAFMDSADEVMPSMLNYLGLDARS 193
Query: 57 NNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS 116
L+ K++ ++ L L F S+ Y+ GD+ +A G+S DV A+ R
Sbjct: 194 ----LKPEDYKVA-EKKLQPLRPYISYFHSSKYVTDLANGDICIAFGYSGDVYQAIHRAQ 248
Query: 117 ------NVAVVVPKSGASLWADLWAIPAASR 141
N+A VVPK G +LW D+ IPA ++
Sbjct: 249 EAGNGVNIAYVVPKEGGNLWFDMLTIPADAK 279
>gi|336435037|ref|ZP_08614755.1| hypothetical protein HMPREF0988_00340 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336001930|gb|EGN32057.1| hypothetical protein HMPREF0988_00340 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 609
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 40/225 (17%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
I Y +K ++ P++ W L+ E AG I M NS R+ +K +G S NSNN D
Sbjct: 398 ILYDTTKVKE----PVDSWDVLFNGEYAGEIIMQNSMRDTYMVAMKALGYSLNSNNEDEV 453
Query: 63 VAGGKISVQQN---LALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVA 119
A + V+Q A L ++AR G+ +AV +S + + ++A
Sbjct: 454 NAAHDLLVKQKPDVQAYLVDEAR--------DEVVAGNATMAVVYSGEAYLGNQYNEDLA 505
Query: 120 VVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEF-CLQTARALPFKQEV 178
V+PK G+++W D W + TKQ Q+++F C + + F E
Sbjct: 506 YVIPKEGSNVWLDSWCV-------TKQCDN-----VDAAQQFLDFLCREDVAEMNF--EY 551
Query: 179 IPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCE 223
I ++P+ E++++G +D VP + CE
Sbjct: 552 IYYSTPN----------EKVIEGLSEEDRANEALVPADDATENCE 586
>gi|384211966|ref|YP_005601048.1| hypothetical protein [Brucella melitensis M5-90]
gi|384445637|ref|YP_005604356.1| hypothetical protein [Brucella melitensis NI]
gi|326539329|gb|ADZ87544.1| conserved hypothetical protein [Brucella melitensis M5-90]
gi|349743626|gb|AEQ09169.1| hypothetical protein BMNI_I1550 [Brucella melitensis NI]
Length = 368
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 74/153 (48%), Gaps = 21/153 (13%)
Query: 3 IAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNS 56
I Y K+K ++ I+ W L+ PE + I +++S E++ L Y+G NS
Sbjct: 140 IGYNKAKIKEALGTDTIDSWDVLFDPEKTAKLKDCGIYLLDSASEMLRPALNYLGLDPNS 199
Query: 57 NN-IDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 114
+ DLQ A Q+L L + R F S+ Y+ A GD+ +AVG+S D+ A R
Sbjct: 200 PSPDDLQKA-------QDLYLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDR 252
Query: 115 MS------NVAVVVPKSGASLWADLWAIPAASR 141
+ +PK GA +W D AIPA ++
Sbjct: 253 AEKAKQGVEIGYSIPKEGALIWFDQMAIPADAK 285
>gi|398975950|ref|ZP_10685976.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM25]
gi|398139942|gb|EJM28930.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM25]
Length = 365
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 18/135 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W L+ PE + ++ ++S E++ +VL YMG + NS + D + A K
Sbjct: 153 IDSWSVLFEPENIKKLHSCGVAFLDSADEMMPTVLNYMGLNANSTDPKDYEKATAK---- 208
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
L + F S+ Y+ GD+ VA+G+S D+ A R N+A +PK
Sbjct: 209 --LLAVRPYVTYFHSSKYIGDLANGDICVAIGFSGDIFQAKNRAEEAKKGVNIAYSIPKE 266
Query: 126 GASLWADLWAIPAAS 140
G +LW D+ AIP S
Sbjct: 267 GGALWFDMLAIPKDS 281
>gi|17986694|ref|NP_539328.1| putrescine-binding periplasmic protein [Brucella melitensis bv. 1
str. 16M]
gi|148559615|ref|YP_001259475.1| putative spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Brucella ovis
ATCC 25840]
gi|163843860|ref|YP_001628264.1| hypothetical protein BSUIS_A1668 [Brucella suis ATCC 23445]
gi|225853084|ref|YP_002733317.1| hypothetical protein BMEA_A1665 [Brucella melitensis ATCC 23457]
gi|256370025|ref|YP_003107536.1| spermidine/putrescine ABC transporter substrate-binding protein
[Brucella microti CCM 4915]
gi|260884340|ref|ZP_05895954.1| extracellular solute-binding protein [Brucella abortus bv. 9 str.
C68]
gi|261214589|ref|ZP_05928870.1| extracellular solute-binding protein family 1 [Brucella abortus bv.
3 str. Tulya]
gi|261222745|ref|ZP_05937026.1| extracellular solute-binding protein [Brucella ceti B1/94]
gi|261315771|ref|ZP_05954968.1| extracellular solute-binding protein family 1 [Brucella
pinnipedialis M163/99/10]
gi|261318214|ref|ZP_05957411.1| extracellular solute-binding protein family 1 [Brucella
pinnipedialis B2/94]
gi|261325666|ref|ZP_05964863.1| extracellular solute-binding protein [Brucella neotomae 5K33]
gi|261752893|ref|ZP_05996602.1| extracellular solute-binding protein family 1 [Brucella suis bv. 5
str. 513]
gi|265989246|ref|ZP_06101803.1| extracellular solute-binding protein family 1 [Brucella
pinnipedialis M292/94/1]
gi|265991659|ref|ZP_06104216.1| extracellular solute-binding protein family 1 [Brucella melitensis
bv. 1 str. Rev.1]
gi|265998707|ref|ZP_06111264.1| extracellular solute-binding protein family 1 [Brucella ceti
M490/95/1]
gi|340791218|ref|YP_004756683.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Brucella
pinnipedialis B2/94]
gi|384409079|ref|YP_005597700.1| extracellular solute-binding protein family 1 [Brucella melitensis
M28]
gi|17982315|gb|AAL51592.1| putrescine-binding periplasmic protein [Brucella melitensis bv. 1
str. 16M]
gi|148370872|gb|ABQ60851.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Brucella ovis
ATCC 25840]
gi|163674583|gb|ABY38694.1| Hypothetical protein BSUIS_A1668 [Brucella suis ATCC 23445]
gi|225641449|gb|ACO01363.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
gi|256000188|gb|ACU48587.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein, putative
[Brucella microti CCM 4915]
gi|260873868|gb|EEX80937.1| extracellular solute-binding protein [Brucella abortus bv. 9 str.
C68]
gi|260916196|gb|EEX83057.1| extracellular solute-binding protein family 1 [Brucella abortus bv.
3 str. Tulya]
gi|260921329|gb|EEX87982.1| extracellular solute-binding protein [Brucella ceti B1/94]
gi|261297437|gb|EEY00934.1| extracellular solute-binding protein family 1 [Brucella
pinnipedialis B2/94]
gi|261301646|gb|EEY05143.1| extracellular solute-binding protein [Brucella neotomae 5K33]
gi|261304797|gb|EEY08294.1| extracellular solute-binding protein family 1 [Brucella
pinnipedialis M163/99/10]
gi|261742646|gb|EEY30572.1| extracellular solute-binding protein family 1 [Brucella suis bv. 5
str. 513]
gi|262553331|gb|EEZ09165.1| extracellular solute-binding protein family 1 [Brucella ceti
M490/95/1]
gi|263002443|gb|EEZ15018.1| extracellular solute-binding protein family 1 [Brucella melitensis
bv. 1 str. Rev.1]
gi|264661443|gb|EEZ31704.1| extracellular solute-binding protein family 1 [Brucella
pinnipedialis M292/94/1]
gi|326409626|gb|ADZ66691.1| extracellular solute-binding protein family 1 [Brucella melitensis
M28]
gi|340559677|gb|AEK54915.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Brucella
pinnipedialis B2/94]
Length = 367
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 74/153 (48%), Gaps = 21/153 (13%)
Query: 3 IAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNS 56
I Y K+K ++ I+ W L+ PE + I +++S E++ L Y+G NS
Sbjct: 139 IGYNKAKIKEALGTDTIDSWDVLFDPEKTAKLKDCGIYLLDSASEMLRPALNYLGLDPNS 198
Query: 57 NN-IDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 114
+ DLQ A Q+L L + R F S+ Y+ A GD+ +AVG+S D+ A R
Sbjct: 199 PSPDDLQKA-------QDLYLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDR 251
Query: 115 MS------NVAVVVPKSGASLWADLWAIPAASR 141
+ +PK GA +W D AIPA ++
Sbjct: 252 AEKAKQGVEIGYSIPKEGALIWFDQMAIPADAK 284
>gi|150395537|ref|YP_001326004.1| extracellular solute-binding protein [Sinorhizobium medicae WSM419]
gi|150027052|gb|ABR59169.1| extracellular solute-binding protein family 1 [Sinorhizobium
medicae WSM419]
Length = 364
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 46/204 (22%)
Query: 20 DWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSN-NIDLQVAGGKI-SVQQ 72
+W ++ PE++ + I +++SP +++ S L Y+G + +S+ DL+ A + V+
Sbjct: 154 NWDVIFDPEISAKFKDCGIHLLDSPTDIMPSALAYLGLNPDSHEQADLEKAADLLMKVRP 213
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM--SNVAVVV----PKSG 126
N+ R F S+ Y+ A GD+ +AVG+S D+ A R +N V V P+ G
Sbjct: 214 NI-------RKFHSSEYINALANGDICLAVGFSGDIFQARDRAAEANAGVTVDYSIPEQG 266
Query: 127 ASLWADLWAIPAASRLETKQIGGRVRGPSPLI---HQWIEFCLQTARALPFKQEVIPGAS 183
A +W D+ AIPA +P + H++I + + K EVI AS
Sbjct: 267 AQMWFDMLAIPA---------------DAPHVAEAHEFINYMM--------KPEVIAKAS 303
Query: 184 PSALETTLVKLPEELLKGKPSQDT 207
K ++ L + +DT
Sbjct: 304 NYVFYANGNKASQQFLDKEVLEDT 327
>gi|296390225|ref|ZP_06879700.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa PAb1]
gi|416874544|ref|ZP_11918188.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa 152504]
gi|334843128|gb|EGM21722.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa 152504]
Length = 363
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 18/148 (12%)
Query: 3 IAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYN 55
IAY K R + AP++ W +++PE + ++ ++SP EVI VL Y+G S N
Sbjct: 134 IAYNLDKVRAVLGDDAPLDSWDLVFKPENLAKLQQCGVAFLDSPTEVIPEVLHYLGLSPN 193
Query: 56 SNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM 115
S+ + +++LA L F S+ ++ G+V VA+ WS + A R
Sbjct: 194 SHQSE-----DYRRAEEHLAKLRPYITYFSSSKFVSDLANGNVCVAIAWSGGAMQAANRA 248
Query: 116 SN------VAVVVPKSGASLWADLWAIP 137
+ +PK GA+ W D+ AIP
Sbjct: 249 REAKNGIRIEYRIPKEGAAAWFDVLAIP 276
>gi|265995497|ref|ZP_06108054.1| extracellular solute-binding protein [Brucella melitensis bv. 3
str. Ether]
gi|262766610|gb|EEZ12399.1| extracellular solute-binding protein [Brucella melitensis bv. 3
str. Ether]
Length = 367
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 74/153 (48%), Gaps = 21/153 (13%)
Query: 3 IAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNS 56
I Y K+K ++ I+ W L+ PE + I +++S E++ L Y+G NS
Sbjct: 139 IGYNKAKIKEALGTDTIDSWDVLFDPEKTAKLKDCGIYLLDSASEMLRPALNYLGLDPNS 198
Query: 57 NN-IDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 114
+ DLQ A Q+L L + R F S+ Y+ A GD+ +AVG+S D+ A R
Sbjct: 199 PSPDDLQKA-------QDLYLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDR 251
Query: 115 MS------NVAVVVPKSGASLWADLWAIPAASR 141
+ +PK GA +W D AIPA ++
Sbjct: 252 AEKAKQGVEIGYSIPKEGALIWFDQMAIPADAK 284
>gi|163751564|ref|ZP_02158786.1| polyamine ABC transporter, periplasmic polyamine-binding protein
[Shewanella benthica KT99]
gi|161328572|gb|EDP99725.1| polyamine ABC transporter, periplasmic polyamine-binding protein
[Shewanella benthica KT99]
Length = 366
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 68/137 (49%), Gaps = 18/137 (13%)
Query: 17 PIEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISV 70
P + + L+ P+ A +IS M++S E++ L Y+ NS N D ++AG
Sbjct: 153 PFDSLELLFNPKYAEKISSCGFSMMDSADEMMSQALTYLKLDPNSTNPDDYKLAG----- 207
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPK 124
+ +A + F S+ Y+ GD+ VA G+S D+ A R ++ +PK
Sbjct: 208 -EAIAKVRPYVTYFHSSRYIIDLANGDICVAFGYSGDIFQAAARAEEADNGQVISYAIPK 266
Query: 125 SGASLWADLWAIPAASR 141
GA+LW D+ AIPA ++
Sbjct: 267 EGANLWFDMLAIPADAK 283
>gi|23502475|ref|NP_698602.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Brucella suis
1330]
gi|161619552|ref|YP_001593439.1| hypothetical protein BCAN_A1649 [Brucella canis ATCC 23365]
gi|261755552|ref|ZP_05999261.1| extracellular solute-binding protein family 1 [Brucella suis bv. 3
str. 686]
gi|376275777|ref|YP_005116216.1| extracellular solute-binding protein [Brucella canis HSK A52141]
gi|376281267|ref|YP_005155273.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Brucella suis
VBI22]
gi|384225261|ref|YP_005616425.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Brucella suis
1330]
gi|23348468|gb|AAN30517.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein, putative
[Brucella suis 1330]
gi|161336363|gb|ABX62668.1| Hypothetical protein BCAN_A1649 [Brucella canis ATCC 23365]
gi|261745305|gb|EEY33231.1| extracellular solute-binding protein family 1 [Brucella suis bv. 3
str. 686]
gi|343383441|gb|AEM18933.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein, putative
[Brucella suis 1330]
gi|358258866|gb|AEU06601.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein, putative
[Brucella suis VBI22]
gi|363404343|gb|AEW14638.1| extracellular solute-binding protein family 1 [Brucella canis HSK
A52141]
Length = 367
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 74/153 (48%), Gaps = 21/153 (13%)
Query: 3 IAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNS 56
I Y K+K ++ I+ W L+ PE + I +++S E++ L Y+G NS
Sbjct: 139 IGYNKAKIKEALGTDTIDSWDVLFDPEKTAKLKDCGIYLLDSASEMLRPALNYLGLDPNS 198
Query: 57 NN-IDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 114
+ DLQ A Q+L L + R F S+ Y+ A GD+ +AVG+S D+ A R
Sbjct: 199 PSPDDLQKA-------QDLYLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDR 251
Query: 115 MS------NVAVVVPKSGASLWADLWAIPAASR 141
+ +PK GA +W D AIPA ++
Sbjct: 252 AEKAKQGVEIGYSIPKEGALIWFDQMAIPADAK 284
>gi|145223724|ref|YP_001134402.1| extracellular solute-binding protein [Mycobacterium gilvum PYR-GCK]
gi|145216210|gb|ABP45614.1| extracellular solute-binding protein, family 1 [Mycobacterium
gilvum PYR-GCK]
Length = 393
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 96/223 (43%), Gaps = 31/223 (13%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGAS-YNSNNIDLQVAGGKISVQQNLAL 76
I DLW P GR+S+++ ++ +G ++ G S N + +Q A + Q +
Sbjct: 188 ISSIDDLWDPAFKGRVSLLSDTQDGLGMIMLSQGNSPENPSTESVQRAVDLVREQNDRG- 246
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
Q R F Y G++ VA +S DV+ ++ +VP+SG + + D I
Sbjct: 247 ---QIRRFTGNDYADDLAAGNIAVAQAYSGDVVQLQADNPDLQFIVPQSGGTTFLDTMVI 303
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQT---ARALPFKQEVIPGASPSALETTLVK 193
P ++ + WI++ A+ + F Q +P L +
Sbjct: 304 PYTTQNQKA------------AEAWIDYVYDRANYAKLVAFTQ-FVP---------VLSE 341
Query: 194 LPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDY 236
+ EEL K P+ +N ++ PPA++L RC+ L++ ++
Sbjct: 342 MTEELEKVDPAAASNPLIN-PPADVLERCKSWAALTDEQTQEF 383
>gi|393765753|ref|ZP_10354314.1| extracellular solute-binding protein [Methylobacterium sp. GXF4]
gi|392728989|gb|EIZ86293.1| extracellular solute-binding protein [Methylobacterium sp. GXF4]
Length = 394
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 67/134 (50%), Gaps = 18/134 (13%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKIS 69
A + W + P A + I M++SP ++I S+L GA +S DL +
Sbjct: 180 AALNSWTVVLNPASANKLKDCGIMMLDSPEDLIPSMLPVFGAKADSKRWDDLTL------ 233
Query: 70 VQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVP 123
V L + R F ++ Y++A GD+ VAVG+S DV+ A +R +A VVP
Sbjct: 234 VTDALYKVRGSVRKFHASEYIQALANGDICVAVGYSGDVMQAKRRAEEAKNGIEIAYVVP 293
Query: 124 KSGASLWADLWAIP 137
K GA +W D +AIP
Sbjct: 294 KEGALMWFDTFAIP 307
>gi|260755322|ref|ZP_05867670.1| extracellular solute-binding protein family 1 [Brucella abortus bv.
6 str. 870]
gi|260675430|gb|EEX62251.1| extracellular solute-binding protein family 1 [Brucella abortus bv.
6 str. 870]
Length = 367
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 74/153 (48%), Gaps = 21/153 (13%)
Query: 3 IAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNS 56
I Y K+K ++ I+ W L+ PE + I +++S E++ L Y+G NS
Sbjct: 139 IGYNKAKIKEALGTDTIDSWDVLFDPEKTAKLKDCGIYLLDSASEMLRPALNYLGLDPNS 198
Query: 57 NN-IDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 114
+ DLQ A Q+L L + R F S+ Y+ A GD+ +AVG+S D+ A R
Sbjct: 199 PSPDDLQKA-------QDLYLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDR 251
Query: 115 MS------NVAVVVPKSGASLWADLWAIPAASR 141
+ +PK GA +W D AIPA ++
Sbjct: 252 AEKAKQGVEIGYSIPKEGALIWFDQMAIPADAK 284
>gi|147672269|ref|YP_001214973.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
O395]
gi|227120303|ref|YP_002822198.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
O395]
gi|262168935|ref|ZP_06036629.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae RC27]
gi|146314652|gb|ABQ19192.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
O395]
gi|227015753|gb|ACP11962.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
O395]
gi|262022634|gb|EEY41341.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae RC27]
Length = 343
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 91/220 (41%), Gaps = 28/220 (12%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALL 77
I W DLW + ++ +++ R+V G LK G S N+ N + ++ ++L L
Sbjct: 143 ITKWADLWDKQYEQQVMLIDDIRDVFGMALKLNGFSINTKN-EEEIK----KAYESLVAL 197
Query: 78 ANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 137
L++S + G+ + + W+ + M + V+P+ GA LW D + IP
Sbjct: 198 KKNVLLYNSDAPHVPYVSGEATLGMQWNGNAYQGQVEMPELKFVMPEEGAVLWMDNFTIP 257
Query: 138 AASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEE 197
+ S+ PL H++I F Q Q + SA + LP E
Sbjct: 258 SGSK------------NIPLAHKFINFMYQPENQAEIVQSL---GYASATKGGRALLPAE 302
Query: 198 LLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
L +D I P E + + EF+ + TL+ YE
Sbjct: 303 L------RDNPTI--FPSDEDMKKSEFINDVGPETLAIYE 334
>gi|62290491|ref|YP_222284.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Brucella abortus
bv. 1 str. 9-941]
gi|82700414|ref|YP_414988.1| solute-binding family 1 protein [Brucella melitensis biovar Abortus
2308]
gi|260758545|ref|ZP_05870893.1| extracellular solute-binding protein family 1 [Brucella abortus bv.
4 str. 292]
gi|260762368|ref|ZP_05874711.1| extracellular solute-binding protein family 1 [Brucella abortus bv.
2 str. 86/8/59]
gi|376272658|ref|YP_005151236.1| Spermidine/putrescine-binding periplasmic protein [Brucella abortus
A13334]
gi|423166335|ref|ZP_17153038.1| hypothetical protein M17_00025 [Brucella abortus bv. 1 str. NI435a]
gi|423171291|ref|ZP_17157966.1| hypothetical protein M19_01824 [Brucella abortus bv. 1 str. NI474]
gi|423172627|ref|ZP_17159298.1| hypothetical protein M1A_00025 [Brucella abortus bv. 1 str. NI486]
gi|423178680|ref|ZP_17165324.1| hypothetical protein M1E_02920 [Brucella abortus bv. 1 str. NI488]
gi|423180722|ref|ZP_17167363.1| hypothetical protein M1G_01822 [Brucella abortus bv. 1 str. NI010]
gi|423183853|ref|ZP_17170490.1| hypothetical protein M1I_01822 [Brucella abortus bv. 1 str. NI016]
gi|423185207|ref|ZP_17171821.1| hypothetical protein M1K_00025 [Brucella abortus bv. 1 str. NI021]
gi|423188342|ref|ZP_17174952.1| hypothetical protein M1M_00024 [Brucella abortus bv. 1 str. NI259]
gi|62196623|gb|AAX74923.1| hypothetical spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Brucella abortus
bv. 1 str. 9-941]
gi|82616515|emb|CAJ11584.1| Bacterial periplasmic spermidine/putrescine-binding
protein:Bacterial extracellular solute-binding protein,
family 1 [Brucella melitensis biovar Abortus 2308]
gi|260668863|gb|EEX55803.1| extracellular solute-binding protein family 1 [Brucella abortus bv.
4 str. 292]
gi|260672800|gb|EEX59621.1| extracellular solute-binding protein family 1 [Brucella abortus bv.
2 str. 86/8/59]
gi|363400263|gb|AEW17233.1| Spermidine/putrescine-binding periplasmic protein [Brucella abortus
A13334]
gi|374538625|gb|EHR10133.1| hypothetical protein M19_01824 [Brucella abortus bv. 1 str. NI474]
gi|374543819|gb|EHR15297.1| hypothetical protein M17_00025 [Brucella abortus bv. 1 str. NI435a]
gi|374544146|gb|EHR15623.1| hypothetical protein M1A_00025 [Brucella abortus bv. 1 str. NI486]
gi|374544734|gb|EHR16200.1| hypothetical protein M1E_02920 [Brucella abortus bv. 1 str. NI488]
gi|374548253|gb|EHR19705.1| hypothetical protein M1G_01822 [Brucella abortus bv. 1 str. NI010]
gi|374548681|gb|EHR20129.1| hypothetical protein M1I_01822 [Brucella abortus bv. 1 str. NI016]
gi|374558904|gb|EHR30293.1| hypothetical protein M1M_00024 [Brucella abortus bv. 1 str. NI259]
gi|374559917|gb|EHR31300.1| hypothetical protein M1K_00025 [Brucella abortus bv. 1 str. NI021]
Length = 367
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 74/153 (48%), Gaps = 21/153 (13%)
Query: 3 IAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNS 56
I Y K+K ++ I+ W L+ PE + I +++S E++ L Y+G NS
Sbjct: 139 IGYNKAKIKEALGTDTIDSWDVLFDPEKTAKLKDCGIYLLDSASEMLRPALNYLGLDPNS 198
Query: 57 NN-IDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 114
+ DLQ A Q+L L + R F S+ Y+ A GD+ +AVG+S D+ A R
Sbjct: 199 PSPDDLQKA-------QDLYLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDR 251
Query: 115 MS------NVAVVVPKSGASLWADLWAIPAASR 141
+ +PK GA +W D AIPA ++
Sbjct: 252 AEKAKQGVEIGYSIPKEGALIWFDQMAIPADAK 284
>gi|323694111|ref|ZP_08108290.1| spermidine/putrescine ABC transporter [Clostridium symbiosum
WAL-14673]
gi|323501828|gb|EGB17711.1| spermidine/putrescine ABC transporter [Clostridium symbiosum
WAL-14673]
Length = 645
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 99/244 (40%), Gaps = 36/244 (14%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID-L 61
I Y + L + W DLW P G I M +S R+ LK G S N+ NI+ L
Sbjct: 424 ILYNTKTIEERGLPVPKKWSDLWNPAYKGEILMQDSVRDAFMVALKARGYSMNTENINEL 483
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN---- 117
Q A + Q+ L QA + D K G G+ + V +S ++L + + N
Sbjct: 484 QEAKADLIAQKPLV----QAYVIDQVR-DKMIG-GEAALGVIFSGEMLYIQEEVENQNLD 537
Query: 118 --VAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFK 175
+ V+P+ G +LW D W IPA ++ + +WI F + AL
Sbjct: 538 YSLEYVIPEEGTNLWIDSWVIPADAKNKENA------------EKWINFLCRPDIALK-N 584
Query: 176 QEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSD 235
E I A+P+ K +ELL + + P + L CE L + T +
Sbjct: 585 FEYITYATPN-------KAAKELLDEDMQNNKAVF---PDMDQLENCEVYRYLGDETDAV 634
Query: 236 YEWL 239
Y L
Sbjct: 635 YNNL 638
>gi|254476380|ref|ZP_05089766.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Ruegeria sp. R11]
gi|214030623|gb|EEB71458.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Ruegeria sp. R11]
Length = 361
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 30/164 (18%)
Query: 16 APIEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
API+ ++ P+ +++ +++P E+I + LKY+G NS + D+ +
Sbjct: 147 APIDSLDLVFNPDNMAKLAECGVYFLDAPDEMIPAALKYIGEDPNSMDADVVAKAEPV-- 204
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM----SNVAVV--VPK 124
L + + F S+ Y+ A GD+ VA GWS D+L A R + V +V PK
Sbjct: 205 ---LTAVRPHVKKFHSSEYINALANGDICVAFGWSGDILQARDRAAEADNGVEIVYNAPK 261
Query: 125 SGASLWADLWAIPAASRLETKQIGGRVRGPSP-LIHQWIEFCLQ 167
GA +W D AIP V P+P H+++ F ++
Sbjct: 262 EGALMWFDQMAIP-------------VDAPNPEAAHKFLNFIME 292
>gi|325291998|ref|YP_004277862.1| putrescine ABC transporter substrate-binding protein [Agrobacterium
sp. H13-3]
gi|418408087|ref|ZP_12981404.1| putrescine ABC transporter substrate-binding protein [Agrobacterium
tumefaciens 5A]
gi|325059851|gb|ADY63542.1| putrescine ABC transporter, substrate binding protein
[Agrobacterium sp. H13-3]
gi|358006073|gb|EHJ98398.1| putrescine ABC transporter substrate-binding protein [Agrobacterium
tumefaciens 5A]
Length = 365
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 18/137 (13%)
Query: 17 PIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISV 70
P++ W L++PE A + I+++++ E + Y+G + +S DL+ G S
Sbjct: 152 PVDSWDILFKPENAEKLKSCGINILDASDETFAIAMNYLGKNPDSKETADLEAGGAVYSK 211
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
+ + F+S+ Y+ GD + +GWS D+L A KR V V+PK
Sbjct: 212 IRPFV------KTFNSSAYIDELANGDSCITIGWSGDILQAKKRAEEAKNGVEVNYVIPK 265
Query: 125 SGASLWADLWAIPAASR 141
G +W D AIPA ++
Sbjct: 266 EGTYMWFDNLAIPADAK 282
>gi|395649466|ref|ZP_10437316.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
extremaustralis 14-3 substr. 14-3b]
Length = 362
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 18/133 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W L+ P+ + ++ ++S E+ ++L YMG S N D + A K
Sbjct: 150 IDSWAVLFEPQNIKKLNQCGVAFLDSADELFPAILNYMGKDPRSENPKDYEEAEAK---- 205
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
L L F S+ Y+ GD+ VA G+S DV A R N+A +PK
Sbjct: 206 --LLTLRPYITYFHSSKYISDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYSIPKE 263
Query: 126 GASLWADLWAIPA 138
G++LW DL AIPA
Sbjct: 264 GSNLWFDLLAIPA 276
>gi|152984615|ref|YP_001349283.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa PA7]
gi|150959773|gb|ABR81798.1| probable periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa PA7]
Length = 363
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 18/148 (12%)
Query: 3 IAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYN 55
IAY K R + AP++ W +++PE + ++ ++SP EVI VL Y+G S N
Sbjct: 134 IAYNLDKVRAVLGDDAPLDSWDLVFKPENLAKLQQCGVAFLDSPTEVIPEVLHYLGLSPN 193
Query: 56 SNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM 115
S+ + +++LA L F S+ ++ G+V VA+ WS + A R
Sbjct: 194 SHQPE-----DYRRAEEHLAKLRPYITYFSSSKFVSDLANGNVCVAIAWSGGAMQAANRA 248
Query: 116 SN------VAVVVPKSGASLWADLWAIP 137
+ +PK GA+ W D+ AIP
Sbjct: 249 REAKNGIRIEYRIPKEGAAAWFDVLAIP 276
>gi|49086268|gb|AAT51340.1| PA1410, partial [synthetic construct]
Length = 364
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 106/239 (44%), Gaps = 41/239 (17%)
Query: 3 IAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYN 55
IAY K R + AP++ W +++PE + ++ ++SP EVI VL Y+G S N
Sbjct: 134 IAYNLDKVRAVLGDDAPLDSWDLVFKPENLAKLQQCGVAFLDSPTEVIPEVLHYLGLSPN 193
Query: 56 SNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM 115
S+ + +++LA L F S+ ++ G+V VA+ WS + A R
Sbjct: 194 SHQPE-----DYRRAEEHLAKLRPYITYFSSSKFVSDLANGNVCVAIAWSGGAMQAANRA 248
Query: 116 SN------VAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTA 169
+ +PK GA+ W D+ AIP ++ +Q H ++++ L+
Sbjct: 249 REAKNGIRIEYRIPKEGAAAWFDVLAIPRDAK-NVEQ-----------AHAFLDYLLRPE 296
Query: 170 RALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPL 228
P + + A+P+ K + L+ + + N+ PP E+ AR +E L
Sbjct: 297 VVTPI-SDYVAYANPN-------KAADGLISAELRDNPNVY---PPEEVQARLYSVEML 344
>gi|315444052|ref|YP_004076931.1| spermidine/putrescine-binding periplasmic protein [Mycobacterium
gilvum Spyr1]
gi|315262355|gb|ADT99096.1| spermidine/putrescine-binding periplasmic protein [Mycobacterium
gilvum Spyr1]
Length = 393
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 96/223 (43%), Gaps = 31/223 (13%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGAS-YNSNNIDLQVAGGKISVQQNLAL 76
I DLW P GR+S+++ ++ +G ++ G S N + +Q A + Q +
Sbjct: 188 ISSIDDLWDPAFKGRVSLLSDTQDGLGMIMLSQGNSPENPSTESVQRAVDLVREQNDRG- 246
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
Q R F Y G++ VA +S DV+ ++ +VP+SG + + D I
Sbjct: 247 ---QIRRFTGNDYADDLAAGNIAVAQAYSGDVVQLQADNPDLQFIVPQSGGTTFLDTMVI 303
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQT---ARALPFKQEVIPGASPSALETTLVK 193
P ++ + WI++ A+ + F Q +P L +
Sbjct: 304 PYTTQNQKA------------AEAWIDYVYDRANYAKLVAFTQ-FVP---------VLSE 341
Query: 194 LPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDY 236
+ EEL K P+ +N ++ PPA++L RC+ L++ ++
Sbjct: 342 MTEELEKVDPAAASNPLIN-PPADVLERCKSWAALTDEQTQEF 383
>gi|325267774|ref|ZP_08134424.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Kingella denitrificans ATCC 33394]
gi|324980655|gb|EGC16317.1| putrescine ABC superfamily ATP binding cassette transporter,
binding protein [Kingella denitrificans ATCC 33394]
Length = 394
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 18/133 (13%)
Query: 17 PIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISV 70
P +W ++ P+ + IS +SP E VLKYMG NS N DL+ A
Sbjct: 181 PANEWDLVFNPQYTAKLKSCGISFFDSPTEQYPLVLKYMGKDPNSENPADLEAANAL--- 237
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L + + F S+ Y+ GD+ VA+G+ D+ A +R N+ V+ PK
Sbjct: 238 ---LKQVRGDVKRFSSSGYIDGLANGDLCVAIGYGGDLNIAKRRAQEAGGKHNIQVLAPK 294
Query: 125 SGASLWADLWAIP 137
+G +W D + IP
Sbjct: 295 TGVGIWIDSFMIP 307
>gi|422317811|ref|ZP_16399109.1| polyamine transporter [Achromobacter xylosoxidans C54]
gi|317407625|gb|EFV87567.1| polyamine transporter [Achromobacter xylosoxidans C54]
Length = 367
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 16/133 (12%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
A + +W +++PE A + ISM++ +V +VLKY+G NS N D A +
Sbjct: 153 ADLANWDMIFKPENAAKLKECGISMLDEAAQVFPAVLKYLGKDPNSANPDDYKAALDV-- 210
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L + R F S+ Y+ +GD+ + G+S DV+ A KR V +PK
Sbjct: 211 ---LKQIRPYIRQFSSSGYIDELAVGDLCMVYGFSGDVMIARKRAQEAKKPYEVNYFIPK 267
Query: 125 SGASLWADLWAIP 137
GA W DL IP
Sbjct: 268 GGAPAWFDLMVIP 280
>gi|398904320|ref|ZP_10652192.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM50]
gi|398175972|gb|EJM63708.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM50]
Length = 365
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 95/218 (43%), Gaps = 32/218 (14%)
Query: 3 IAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYN 55
I Y +K ++ AP+ W L++PE A + IS ++SP E++ + L Y+G N
Sbjct: 136 IGYNPAKVKEVLGTDAPVNSWDLLFKPENAAKLKACGISFLDSPTEMLPAALHYLGYPVN 195
Query: 56 SNNIDLQVAGGKISVQQNLALLAN---QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 112
S + K + + AL F S+ Y+ G++ VAVG+S DVL A
Sbjct: 196 SQD--------KAQIAEAEALFMKIRPSVAYFHSSKYISDLANGNICVAVGYSGDVLQAK 247
Query: 113 KRMSN------VAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPL--IHQWI 162
R V +PK GA + D+ AIP AA+ + P + + I
Sbjct: 248 ARAKEAGDKVKVEYSIPKEGAGSFYDMVAIPRDAANVDNAYLFMNFLMRPDIIAEVTNNI 307
Query: 163 EFCLQTARALPFKQEVI---PGAS-PSALETTLVKLPE 196
+ A A P E I PG+ P A+ TL +P+
Sbjct: 308 GYSNANAAATPLVDEAIRDDPGSYPPQAVMATLYAIPD 345
>gi|323485348|ref|ZP_08090697.1| spermidine/putrescine-binding periplasmic protein PotD [Clostridium
symbiosum WAL-14163]
gi|355625500|ref|ZP_09048281.1| hypothetical protein HMPREF1020_02360 [Clostridium sp. 7_3_54FAA]
gi|323401384|gb|EGA93733.1| spermidine/putrescine-binding periplasmic protein PotD [Clostridium
symbiosum WAL-14163]
gi|354821324|gb|EHF05714.1| hypothetical protein HMPREF1020_02360 [Clostridium sp. 7_3_54FAA]
Length = 645
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 99/244 (40%), Gaps = 36/244 (14%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID-L 61
I Y + L + W DLW P G I M +S R+ LK G S N+ NI+ L
Sbjct: 424 ILYNTKTIEERGLPVPKKWSDLWNPAYKGEILMQDSVRDAFMVALKARGYSMNTENINEL 483
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN---- 117
Q A + Q+ L QA + D K G G+ + V +S ++L + + N
Sbjct: 484 QEAKADLIAQKPLV----QAYVIDQVR-DKMIG-GEAALGVIFSGEMLYIQEEVENQNLD 537
Query: 118 --VAVVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFK 175
+ V+P+ G +LW D W IPA ++ + +WI F + AL
Sbjct: 538 YSLEYVIPEEGTNLWIDSWVIPADAKNKENA------------EKWINFLCRPDIALK-N 584
Query: 176 QEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSD 235
E I A+P+ K +ELL + + P + L CE L + T +
Sbjct: 585 FEYITYATPN-------KAAKELLDEDMQNNKAVF---PDMDQLENCEVYRYLGDETDAV 634
Query: 236 YEWL 239
Y L
Sbjct: 635 YNNL 638
>gi|157374200|ref|YP_001472800.1| extracellular solute-binding protein [Shewanella sediminis HAW-EB3]
gi|157316574|gb|ABV35672.1| extracellular solute-binding protein, family 1 [Shewanella
sediminis HAW-EB3]
Length = 366
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 18/149 (12%)
Query: 3 IAYKKSKFRK--HNLAPIEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYN 55
I Y ++K ++ AP++ + ++ P+ A ++S ++S E++ L Y+G N
Sbjct: 137 IGYNEAKVKEVLGEDAPVDSLELIFNPKYASKLSKCGLSFLDSADEMVPMALIYLGLDPN 196
Query: 56 SNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM 115
S+ D G++ L + F S+ Y+ GD+ VAVG+S D+L A R
Sbjct: 197 SSKKDDFKRAGEV-----LEAIRPHITYFHSSRYITDLANGDLCVAVGYSGDILQAATRA 251
Query: 116 SN------VAVVVPKSGASLWADLWAIPA 138
+ +PK GA+LW D+ AIPA
Sbjct: 252 EEAENGHVIGYSIPKEGANLWFDMLAIPA 280
>gi|15596607|ref|NP_250101.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa PAO1]
gi|107100846|ref|ZP_01364764.1| hypothetical protein PaerPA_01001875 [Pseudomonas aeruginosa PACS2]
gi|218892717|ref|YP_002441586.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa LESB58]
gi|254234510|ref|ZP_04927833.1| hypothetical protein PACG_00369 [Pseudomonas aeruginosa C3719]
gi|254239762|ref|ZP_04933084.1| hypothetical protein PA2G_00387 [Pseudomonas aeruginosa 2192]
gi|313106401|ref|ZP_07792635.1| putative periplasmic putrescine-binding permease protein
[Pseudomonas aeruginosa 39016]
gi|386059782|ref|YP_005976304.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa M18]
gi|386065231|ref|YP_005980535.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa NCGM2.S1]
gi|416862774|ref|ZP_11915133.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa 138244]
gi|418583265|ref|ZP_13147335.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa MPAO1/P1]
gi|418593218|ref|ZP_13157070.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa MPAO1/P2]
gi|420136669|ref|ZP_14644704.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa CIG1]
gi|421161841|ref|ZP_15620761.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa ATCC 25324]
gi|421181616|ref|ZP_15639111.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa E2]
gi|421516044|ref|ZP_15962730.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa PAO579]
gi|9947357|gb|AAG04799.1|AE004570_7 probable periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa PAO1]
gi|126166441|gb|EAZ51952.1| hypothetical protein PACG_00369 [Pseudomonas aeruginosa C3719]
gi|126193140|gb|EAZ57203.1| hypothetical protein PA2G_00387 [Pseudomonas aeruginosa 2192]
gi|218772945|emb|CAW28757.1| probable periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa LESB58]
gi|310879137|gb|EFQ37731.1| putative periplasmic putrescine-binding permease protein
[Pseudomonas aeruginosa 39016]
gi|334835734|gb|EGM14589.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa 138244]
gi|347306088|gb|AEO76202.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa M18]
gi|348033790|dbj|BAK89150.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa NCGM2.S1]
gi|375047485|gb|EHS40031.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa MPAO1/P1]
gi|375047922|gb|EHS40457.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa MPAO1/P2]
gi|403250570|gb|EJY63991.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa CIG1]
gi|404349772|gb|EJZ76109.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa PAO579]
gi|404538515|gb|EKA48046.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa ATCC 25324]
gi|404543444|gb|EKA52717.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa E2]
gi|453048458|gb|EME96171.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa PA21_ST175]
Length = 363
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 18/148 (12%)
Query: 3 IAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYN 55
IAY K R + AP++ W +++PE + ++ ++SP EVI VL Y+G S N
Sbjct: 134 IAYNLDKVRAVLGDDAPLDSWDLVFKPENLAKLQQCGVAFLDSPTEVIPEVLHYLGLSPN 193
Query: 56 SNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM 115
S+ + +++LA L F S+ ++ G+V VA+ WS + A R
Sbjct: 194 SHQPE-----DYRRAEEHLAKLRPYITYFSSSKFVSDLANGNVCVAIAWSGGAMQAANRA 248
Query: 116 SN------VAVVVPKSGASLWADLWAIP 137
+ +PK GA+ W D+ AIP
Sbjct: 249 REAKNGIRIEYRIPKEGAAAWFDVLAIP 276
>gi|399040652|ref|ZP_10735990.1| spermidine/putrescine-binding periplasmic protein [Rhizobium sp.
CF122]
gi|398061439|gb|EJL53235.1| spermidine/putrescine-binding periplasmic protein [Rhizobium sp.
CF122]
Length = 366
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 13/116 (11%)
Query: 33 ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLALLANQARLFDSTHYLK 91
I ++++P++V+ S L Y+G NS+ DLQ AG + L + R F S+ Y+
Sbjct: 174 IYVLDAPKDVMPSALTYIGLDPNSSKPADLQKAG------ELLEKVRPFVRKFHSSEYIN 227
Query: 92 AFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGASLWADLWAIPAASR 141
A GD+ +A G+S D+ A R + + +P GA +W D+ AIPA ++
Sbjct: 228 ALANGDICIAFGYSGDIFQAANRATEAKNGVEIGYSIPSQGAQMWFDMMAIPADAK 283
>gi|451984912|ref|ZP_21933148.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Pseudomonas aeruginosa 18A]
gi|451757471|emb|CCQ85671.1| Putrescine ABC transporter putrescine-binding protein PotF (TC
3.A.1.11.2) [Pseudomonas aeruginosa 18A]
Length = 363
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 18/148 (12%)
Query: 3 IAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYN 55
IAY K R + AP++ W +++PE + ++ ++SP EVI VL Y+G S N
Sbjct: 134 IAYNLDKVRAVLGDDAPLDSWDLVFKPENLAKLQQCGVAFLDSPTEVIPEVLHYLGLSPN 193
Query: 56 SNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM 115
S+ + +++LA L F S+ ++ G+V VA+ WS + A R
Sbjct: 194 SHQPE-----DYRRAEEHLAKLRPYITYFSSSKFVSDLANGNVCVAIAWSGGAMQAANRA 248
Query: 116 SN------VAVVVPKSGASLWADLWAIP 137
+ +PK GA+ W D+ AIP
Sbjct: 249 REAKNGIRIEYRIPKEGAAAWFDVLAIP 276
>gi|421169026|ref|ZP_15627073.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa ATCC 700888]
gi|404527872|gb|EKA38000.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa ATCC 700888]
Length = 363
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 73/152 (48%), Gaps = 18/152 (11%)
Query: 3 IAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYN 55
IAY K R + AP++ W +++PE + ++ ++SP EVI VL Y+G S N
Sbjct: 134 IAYNLDKVRAVLGDDAPLDSWDLVFKPENLAKLQQCGVAFLDSPTEVIPEVLHYLGLSPN 193
Query: 56 SNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM 115
S+ + +++LA L F S+ ++ G+V VA+ WS + A R
Sbjct: 194 SHQPE-----DYRRAEEHLAKLRPYITYFSSSKFVSDLANGNVCVAIAWSGGAMQAANRA 248
Query: 116 SN------VAVVVPKSGASLWADLWAIPAASR 141
+ +PK GA+ W D+ AIP ++
Sbjct: 249 REAKNGIRIEYRIPKEGAAAWFDVLAIPRDAK 280
>gi|426412094|ref|YP_007032193.1| putrescine-binding periplasmic protein [Pseudomonas sp. UW4]
gi|426270311|gb|AFY22388.1| putrescine-binding periplasmic protein [Pseudomonas sp. UW4]
Length = 365
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 18/135 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W L+ PE + ++ ++S E++ +VL YMG + NS + D + A K
Sbjct: 153 IDSWGVLFEPENIKKLQSCGVAFLDSADEMMPTVLNYMGLNANSTDPKDYEKATAK---- 208
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
L + F S+ Y+ GD+ VA+G+S D+ A R N+A +PK
Sbjct: 209 --LLAVRPYVTYFHSSKYIADLANGDICVAIGFSGDIFQAKNRAEEAKKGVNIAYSIPKE 266
Query: 126 GASLWADLWAIPAAS 140
G +LW D+ AIP S
Sbjct: 267 GGALWFDMLAIPKDS 281
>gi|421154900|ref|ZP_15614391.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa ATCC 14886]
gi|404521287|gb|EKA31894.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa ATCC 14886]
Length = 363
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 18/148 (12%)
Query: 3 IAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYN 55
IAY K R + AP++ W +++PE + ++ ++SP EVI VL Y+G S N
Sbjct: 134 IAYNLDKVRAVLGDDAPLDSWDLVFKPENLAKLQQCGVAFLDSPTEVIPEVLHYLGLSPN 193
Query: 56 SNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM 115
S+ + +++LA L F S+ ++ G+V VA+ WS + A R
Sbjct: 194 SHQPE-----DYRRAEEHLAKLRPYITYFSSSKFVSDLANGNVCVAIAWSGGAMQAANRA 248
Query: 116 SN------VAVVVPKSGASLWADLWAIP 137
+ +PK GA+ W D+ AIP
Sbjct: 249 REAKNGIRIEYRIPKEGAAAWFDVLAIP 276
>gi|116049356|ref|YP_791841.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa UCBPP-PA14]
gi|355645149|ref|ZP_09054039.1| hypothetical protein HMPREF1030_03125 [Pseudomonas sp. 2_1_26]
gi|421175518|ref|ZP_15633196.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa CI27]
gi|115584577|gb|ABJ10592.1| putative periplasmic putrescine-binding permease protein
[Pseudomonas aeruginosa UCBPP-PA14]
gi|354828919|gb|EHF13017.1| hypothetical protein HMPREF1030_03125 [Pseudomonas sp. 2_1_26]
gi|404532111|gb|EKA42030.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa CI27]
Length = 363
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 18/148 (12%)
Query: 3 IAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYN 55
IAY K R + AP++ W +++PE + ++ ++SP EVI VL Y+G S N
Sbjct: 134 IAYNLDKVRAVLGDDAPLDSWDLVFKPENLAKLQQCGVAFLDSPTEVIPEVLHYLGLSPN 193
Query: 56 SNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM 115
S+ + +++LA L F S+ ++ G+V VA+ WS + A R
Sbjct: 194 SHQPE-----DYRRAEEHLAKLRPYITYFSSSKFVSDLANGNVCVAIAWSGGAMQAANRA 248
Query: 116 SN------VAVVVPKSGASLWADLWAIP 137
+ +PK GA+ W D+ AIP
Sbjct: 249 REAKNGIRIEYRIPKEGAAAWFDVLAIP 276
>gi|422654041|ref|ZP_16716794.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. actinidiae str. M302091]
gi|330967077|gb|EGH67337.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae pv. actinidiae str. M302091]
Length = 364
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 66/136 (48%), Gaps = 18/136 (13%)
Query: 18 IEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W L+ PE ++S ++S E++ ++L Y+G S NS N D + A K
Sbjct: 152 IDSWAVLFEPENIKKLSSCGVAFLDSADEMLPAMLNYLGLSPNSTNEADYKKAEAK---- 207
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKS 125
L + F S+ Y+ GD+ VA G+S DV A R +A +PK
Sbjct: 208 --LLAIRPHVTYFHSSKYITDLANGDICVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKE 265
Query: 126 GASLWADLWAIPAASR 141
G +LW D+ AIPA S+
Sbjct: 266 GGNLWFDMLAIPADSK 281
>gi|304397032|ref|ZP_07378911.1| extracellular solute-binding protein family 1 [Pantoea sp. aB]
gi|304355181|gb|EFM19549.1| extracellular solute-binding protein family 1 [Pantoea sp. aB]
Length = 369
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS++ +G +
Sbjct: 154 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSDAK-DYSGAATDL 212
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ G++ VA+GWS D+L A R ++ VPK
Sbjct: 213 ---LLKLRPNIRYFHSSQYINDLANGNICVAIGWSGDILQAKNRADAAKNGVHLGYSVPK 269
Query: 125 SGASLWADLWAIPAASR 141
GA + D+ AIP ++
Sbjct: 270 EGALAFFDMMAIPKDAK 286
>gi|145297278|ref|YP_001140119.1| ABC-type putrescine transporter periplasmic binding protein
[Aeromonas salmonicida subsp. salmonicida A449]
gi|142850050|gb|ABO88371.1| ABC-type putrescine transporter, periplasmic binding protein
[Aeromonas salmonicida subsp. salmonicida A449]
Length = 361
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 18/133 (13%)
Query: 18 IEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W ++ PE ++S ++S E+I +VL Y+G NS+ D++ A +
Sbjct: 149 IDSWAVIFEPENMQKLSRCGVAFLDSADEMIPAVLNYLGLDPNSHKPEDIKRA------E 202
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
+ L + F S+ Y+ GD+ VA G+S D+L A R N+A +PK
Sbjct: 203 EQLLKVRPYVTYFHSSKYIGDLANGDICVAAGFSGDILQAAARADEAGKGINIAYSIPKE 262
Query: 126 GASLWADLWAIPA 138
G +LW D+ AIPA
Sbjct: 263 GGNLWFDMMAIPA 275
>gi|336392100|ref|ZP_08573499.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
coryniformis subsp. torquens KCTC 3535]
Length = 357
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 72/131 (54%), Gaps = 11/131 (8%)
Query: 14 NLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKI-SVQ 71
N + I+ W DLW P+L I +V+S R+++G L G S N+ NI +L+ A K+ +
Sbjct: 151 NGSQIQHWNDLWSPKLRNNIMLVDSARDIMGMALISQGHSVNTTNIAELEQAKLKLEGLM 210
Query: 72 QNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLW 130
N+ A++A++ +++ + + + VAV WS + + S++ VVP G++LW
Sbjct: 211 PNVKAVVADEIKMYMAQN--------EAAVAVTWSGEAAEMMANNSHLHYVVPTEGSNLW 262
Query: 131 ADLWAIPAASR 141
D IP ++
Sbjct: 263 FDNLVIPKTAK 273
>gi|153011248|ref|YP_001372462.1| extracellular solute-binding protein [Ochrobactrum anthropi ATCC
49188]
gi|404318174|ref|ZP_10966107.1| extracellular solute-binding protein [Ochrobactrum anthropi
CTS-325]
gi|151563136|gb|ABS16633.1| extracellular solute-binding protein family 1 [Ochrobactrum
anthropi ATCC 49188]
Length = 367
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 21/153 (13%)
Query: 3 IAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNS 56
I Y K+K ++ I+ W L+ PE + + I +++S E++ L Y+G NS
Sbjct: 139 IGYNKAKIKEALGTDTIDSWDVLFDPEKSAKLKGCGIYLLDSASEMLRPALNYLGLDPNS 198
Query: 57 NN-IDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 114
+ DLQ A Q+L L + R F S+ Y+ A GD+ +A+G+S D+ A R
Sbjct: 199 PSPDDLQKA-------QDLYLKIRPNIRKFHSSEYINALANGDICMAIGYSGDIFQARDR 251
Query: 115 MS------NVAVVVPKSGASLWADLWAIPAASR 141
+ +PK GA +W D AIPA ++
Sbjct: 252 AEKAKQGVEIGYSIPKEGALIWFDQMAIPADAK 284
>gi|116513745|ref|YP_812651.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
delbrueckii subsp. bulgaricus ATCC BAA-365]
gi|385815365|ref|YP_005851756.1| Spermidine and putrescine periplasmatic ABC transporter
[Lactobacillus delbrueckii subsp. bulgaricus 2038]
gi|418035487|ref|ZP_12673944.1| hypothetical protein LDBUL1519_00644 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
gi|116093060|gb|ABJ58213.1| Spermidine/putrescine-binding periplasmic protein [Lactobacillus
delbrueckii subsp. bulgaricus ATCC BAA-365]
gi|325125402|gb|ADY84732.1| Spermidine and putrescine periplasmatic ABC transporter
[Lactobacillus delbrueckii subsp. bulgaricus 2038]
gi|354690476|gb|EHE90424.1| hypothetical protein LDBUL1519_00644 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
Length = 360
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 71/129 (55%), Gaps = 11/129 (8%)
Query: 16 APIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN-SNNIDLQVAGGKIS-VQQN 73
I+ W DLW+ + G+I +V+S R+++G L MG S N +N+ L+ A K+ + +N
Sbjct: 155 GEIKSWNDLWKKKYQGQILLVDSARDIMGMSLVSMGYSMNDTNSAHLKAAKAKLDKIGKN 214
Query: 74 L-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWAD 132
+ A++A++ +++ + + W+ V +S + + + S++ VVP G++LW D
Sbjct: 215 VKAIVADELKMYMVQN--------EAWIGVTYSGEAAMMMDQDSHIHYVVPAQGSNLWFD 266
Query: 133 LWAIPAASR 141
IP +
Sbjct: 267 NIVIPKTCK 275
>gi|15601861|ref|NP_233492.1| spermidine/putrescine ABC transporter substrate-binding protein
[Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121585940|ref|ZP_01675733.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
2740-80]
gi|121728505|ref|ZP_01681529.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
V52]
gi|153212814|ref|ZP_01948450.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
1587]
gi|153801275|ref|ZP_01955861.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
MZO-3]
gi|153816688|ref|ZP_01969355.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
NCTC 8457]
gi|153821212|ref|ZP_01973879.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
B33]
gi|153827835|ref|ZP_01980502.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
623-39]
gi|227812675|ref|YP_002812685.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
M66-2]
gi|229506817|ref|ZP_04396326.1| putrescine ABC transporter putrescine-binding protein PotF [Vibrio
cholerae BX 330286]
gi|229510388|ref|ZP_04399868.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae B33]
gi|229514518|ref|ZP_04403979.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae TMA 21]
gi|229517481|ref|ZP_04406926.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae RC9]
gi|229528004|ref|ZP_04417395.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae 12129(1)]
gi|229605291|ref|YP_002875995.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae MJ-1236]
gi|254224635|ref|ZP_04918251.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
V51]
gi|254284731|ref|ZP_04959698.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
AM-19226]
gi|254850268|ref|ZP_05239618.1| spermidine/putrescine ABC transporter [Vibrio cholerae MO10]
gi|255746164|ref|ZP_05420111.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholera CIRS 101]
gi|262158653|ref|ZP_06029767.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae INDRE 91/1]
gi|262192301|ref|ZP_06050456.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae CT 5369-93]
gi|297579852|ref|ZP_06941779.1| spermidine/putrescine ABC transporter [Vibrio cholerae RC385]
gi|298499871|ref|ZP_07009677.1| spermidine/putrescine ABC transporter [Vibrio cholerae MAK 757]
gi|360038005|ref|YP_004939767.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
O1 str. 2010EL-1786]
gi|379744487|ref|YP_005335539.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
IEC224]
gi|417812053|ref|ZP_12458714.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-49A2]
gi|417816647|ref|ZP_12463277.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HCUF01]
gi|417819582|ref|ZP_12466197.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE39]
gi|417822919|ref|ZP_12469517.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE48]
gi|418330651|ref|ZP_12941630.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-06A1]
gi|418337546|ref|ZP_12946441.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-23A1]
gi|418342192|ref|ZP_12949021.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-28A1]
gi|418349219|ref|ZP_12953951.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-43A1]
gi|418353640|ref|ZP_12956365.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-61A1]
gi|419825948|ref|ZP_14349451.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1033(6)]
gi|421317308|ref|ZP_15767878.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1032(5)]
gi|421323930|ref|ZP_15774457.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1041(14)]
gi|421326900|ref|ZP_15777418.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1042(15)]
gi|421331989|ref|ZP_15782468.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1046(19)]
gi|421335622|ref|ZP_15786085.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1048(21)]
gi|421341430|ref|ZP_15791850.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-20A2]
gi|421345945|ref|ZP_15796329.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-46A1]
gi|421349691|ref|ZP_15800060.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-25]
gi|422890025|ref|ZP_16932485.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-40A1]
gi|422899504|ref|ZP_16936216.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-48A1]
gi|422904982|ref|ZP_16939869.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-70A1]
gi|422915324|ref|ZP_16949773.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HFU-02]
gi|422921232|ref|ZP_16954482.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae BJG-01]
gi|422927985|ref|ZP_16960929.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-38A1]
gi|423147058|ref|ZP_17134546.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-19A1]
gi|423148048|ref|ZP_17135426.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-21A1]
gi|423151833|ref|ZP_17139064.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-22A1]
gi|423158457|ref|ZP_17145470.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-32A1]
gi|423162262|ref|ZP_17149134.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-33A2]
gi|423163362|ref|ZP_17150178.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-48B2]
gi|423733226|ref|ZP_17706467.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-17A1]
gi|423743369|ref|ZP_17710868.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-50A2]
gi|423910611|ref|ZP_17728599.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-62A1]
gi|423919682|ref|ZP_17729512.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-77A1]
gi|423952923|ref|ZP_17734314.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-40]
gi|423981448|ref|ZP_17737678.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-46]
gi|424002295|ref|ZP_17745380.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-17A2]
gi|424004539|ref|ZP_17747545.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-37A1]
gi|424022471|ref|ZP_17762154.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-62B1]
gi|424029250|ref|ZP_17768801.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-69A1]
gi|424588741|ref|ZP_18028237.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1030(3)]
gi|424590579|ref|ZP_18030015.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1037(10)]
gi|424593489|ref|ZP_18032848.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1040(13)]
gi|424597418|ref|ZP_18036635.1| bacterial extracellular solute-binding family protein [Vibrio
Cholerae CP1044(17)]
gi|424603159|ref|ZP_18042293.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1047(20)]
gi|424604995|ref|ZP_18043982.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1050(23)]
gi|424608821|ref|ZP_18047699.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-39A1]
gi|424615603|ref|ZP_18054319.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-41A1]
gi|424619448|ref|ZP_18058053.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-42A1]
gi|424620361|ref|ZP_18058909.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-47A1]
gi|424642988|ref|ZP_18080766.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-56A2]
gi|424651102|ref|ZP_18088648.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-57A2]
gi|424654885|ref|ZP_18092203.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-81A2]
gi|429887818|ref|ZP_19369324.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae PS15]
gi|440711255|ref|ZP_20891896.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae 4260B]
gi|443505848|ref|ZP_21072735.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-64A1]
gi|443509756|ref|ZP_21076449.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-65A1]
gi|443513580|ref|ZP_21080150.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-67A1]
gi|443517413|ref|ZP_21083858.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-68A1]
gi|443521071|ref|ZP_21087402.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-71A1]
gi|443521975|ref|ZP_21088250.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-72A2]
gi|443530004|ref|ZP_21096021.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-7A1]
gi|443533700|ref|ZP_21099641.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-80A1]
gi|443537371|ref|ZP_21103229.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-81A1]
gi|449057568|ref|ZP_21735864.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae O1 str. Inaba G4222]
gi|9658560|gb|AAF97004.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
O1 biovar El Tor str. N16961]
gi|121549876|gb|EAX59896.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
2740-80]
gi|121629223|gb|EAX61661.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
V52]
gi|124116327|gb|EAY35147.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
1587]
gi|124123190|gb|EAY41933.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
MZO-3]
gi|125622698|gb|EAZ51016.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
V51]
gi|126512707|gb|EAZ75301.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
NCTC 8457]
gi|126521271|gb|EAZ78494.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
B33]
gi|148876680|gb|EDL74815.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
623-39]
gi|150425516|gb|EDN17292.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
AM-19226]
gi|227011817|gb|ACP08028.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
M66-2]
gi|229334366|gb|EEN99851.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae 12129(1)]
gi|229345517|gb|EEO10490.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae RC9]
gi|229348498|gb|EEO13456.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae TMA 21]
gi|229352833|gb|EEO17773.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae B33]
gi|229357168|gb|EEO22086.1| putrescine ABC transporter putrescine-binding protein PotF [Vibrio
cholerae BX 330286]
gi|229371777|gb|ACQ62199.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae MJ-1236]
gi|254845973|gb|EET24387.1| spermidine/putrescine ABC transporter [Vibrio cholerae MO10]
gi|255735918|gb|EET91316.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholera CIRS 101]
gi|262029533|gb|EEY48183.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae INDRE 91/1]
gi|262031794|gb|EEY50377.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae CT 5369-93]
gi|297535498|gb|EFH74332.1| spermidine/putrescine ABC transporter [Vibrio cholerae RC385]
gi|297541852|gb|EFH77903.1| spermidine/putrescine ABC transporter [Vibrio cholerae MAK 757]
gi|340039797|gb|EGR00770.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HCUF01]
gi|340040440|gb|EGR01412.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE39]
gi|340044873|gb|EGR05821.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-49A2]
gi|340049049|gb|EGR09965.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE48]
gi|341627361|gb|EGS52678.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-70A1]
gi|341628863|gb|EGS54056.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-48A1]
gi|341628994|gb|EGS54178.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-40A1]
gi|341632302|gb|EGS57173.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HFU-02]
gi|341642870|gb|EGS67170.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-38A1]
gi|341649542|gb|EGS73510.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae BJG-01]
gi|356416981|gb|EHH70601.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-19A1]
gi|356423906|gb|EHH77334.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-06A1]
gi|356424646|gb|EHH78048.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-21A1]
gi|356430930|gb|EHH84135.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-23A1]
gi|356435420|gb|EHH88576.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-32A1]
gi|356437028|gb|EHH90138.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-22A1]
gi|356439650|gb|EHH92617.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-28A1]
gi|356440748|gb|EHH93686.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-33A2]
gi|356446081|gb|EHH98881.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-43A1]
gi|356454705|gb|EHI07352.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-61A1]
gi|356456994|gb|EHI09570.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-48B2]
gi|356649159|gb|AET29213.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
O1 str. 2010EL-1786]
gi|378797081|gb|AFC60551.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Vibrio cholerae
IEC224]
gi|395919766|gb|EJH30589.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1032(5)]
gi|395921944|gb|EJH32763.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1041(14)]
gi|395930787|gb|EJH41533.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1046(19)]
gi|395933825|gb|EJH44564.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1042(15)]
gi|395935304|gb|EJH46039.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1048(21)]
gi|395937262|gb|EJH47982.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-20A2]
gi|395947472|gb|EJH58127.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-46A1]
gi|395950778|gb|EJH61394.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-42A1]
gi|395956308|gb|EJH66902.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-25]
gi|395965920|gb|EJH76058.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-57A2]
gi|395966528|gb|EJH76647.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-56A2]
gi|395968101|gb|EJH78091.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1030(3)]
gi|395973397|gb|EJH82958.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1047(20)]
gi|395977877|gb|EJH87271.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-47A1]
gi|408005613|gb|EKG43812.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-41A1]
gi|408011780|gb|EKG49583.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-39A1]
gi|408034337|gb|EKG70840.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1037(10)]
gi|408039155|gb|EKG75449.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1040(13)]
gi|408046209|gb|EKG81910.1| bacterial extracellular solute-binding family protein [Vibrio
Cholerae CP1044(17)]
gi|408048133|gb|EKG83590.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1050(23)]
gi|408058880|gb|EKG93659.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-81A2]
gi|408608738|gb|EKK82121.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1033(6)]
gi|408615804|gb|EKK88979.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-17A1]
gi|408645801|gb|EKL17435.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-50A2]
gi|408649720|gb|EKL21033.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-62A1]
gi|408659668|gb|EKL30703.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-40]
gi|408661555|gb|EKL32540.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-77A1]
gi|408665384|gb|EKL36200.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-46]
gi|408847776|gb|EKL87837.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-17A2]
gi|408850875|gb|EKL90818.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-37A1]
gi|408872205|gb|EKM11428.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-69A1]
gi|408876720|gb|EKM15830.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-62B1]
gi|429225135|gb|EKY31411.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae PS15]
gi|439972742|gb|ELP48985.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae 4260B]
gi|443429830|gb|ELS72453.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-64A1]
gi|443433792|gb|ELS80006.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-65A1]
gi|443437751|gb|ELS87534.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-67A1]
gi|443441572|gb|ELS94940.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-68A1]
gi|443445504|gb|ELT02225.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-71A1]
gi|443452118|gb|ELT12347.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-72A2]
gi|443459574|gb|ELT26968.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-7A1]
gi|443463176|gb|ELT34186.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-80A1]
gi|443467380|gb|ELT42036.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-81A1]
gi|448263177|gb|EMB00424.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae O1 str. Inaba G4222]
Length = 343
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 91/220 (41%), Gaps = 28/220 (12%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALL 77
I W DLW + ++ +++ R+V G LK G S N+ N + ++ ++L L
Sbjct: 143 ITKWADLWDKQYEQQVMLIDDIRDVFGMALKLNGFSINTKN-EEEIK----KAYESLVAL 197
Query: 78 ANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 137
L++S + G+ + + W+ + M + V+P+ GA LW D + IP
Sbjct: 198 KKNVLLYNSDAPHVPYVSGEATLGMQWNGNAYQGQVEMPELKFVMPEEGAVLWMDNFTIP 257
Query: 138 AASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEE 197
+ S+ PL H++I F Q Q + SA + LP E
Sbjct: 258 SGSK------------NIPLAHKFINFMYQPENQAEIVQSL---GYASATKGGRALLPAE 302
Query: 198 LLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
L +D I P E + + EF+ + TL+ YE
Sbjct: 303 L------RDNPTI--FPSDEDMKKGEFINDVGPETLAIYE 334
>gi|410697229|gb|AFV76297.1| spermidine/putrescine-binding periplasmic protein [Thermus oshimai
JL-2]
Length = 351
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 102/229 (44%), Gaps = 37/229 (16%)
Query: 16 APIEDWKDLWRPELA-GRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNL 74
P++ + + PE A G +++ RE +G+ LKY+G S N+ + K +
Sbjct: 148 GPVDSYAVFFDPEKAVGPFLLLDEMRETVGAALKYLGYSVNATD-------PKALEEAKA 200
Query: 75 ALLANQARLFDSTHYLKAFG---IGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWA 131
LL+ +AR ++A GD V + +S DVL A + + + +PK G +LW
Sbjct: 201 LLLSAKARSVGFAGGIEALNRLLAGDAAVTLAYSGDVLQARQEDARLRYAIPKEGGTLWT 260
Query: 132 DLWAIPAASRLETKQIGGRVRGPS-PLIHQWIEFCLQTARALPFKQEVIPGASPSALETT 190
D + RGP+ L +++I+F L+ A E A+P A
Sbjct: 261 DAMVV-------------LKRGPAQDLAYRFIDFLLEPENAAALA-EYTRYATPVAAAIP 306
Query: 191 LVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLS-EATLSDYEW 238
L LPEE+ QD V PP E+ ++ E+L+ L + L D W
Sbjct: 307 L--LPEEM-----RQDP---VVFPPEEVRSKLEYLKDLGPDIALFDQVW 345
>gi|333394556|ref|ZP_08476375.1| spermidine/putrescine-binding periplasmic protein [Lactobacillus
coryniformis subsp. coryniformis KCTC 3167]
gi|420145444|ref|ZP_14652910.1| Spermidine/putrescine-binding periplasmic protein [Lactobacillus
coryniformis subsp. coryniformis CECT 5711]
gi|398402939|gb|EJN56224.1| Spermidine/putrescine-binding periplasmic protein [Lactobacillus
coryniformis subsp. coryniformis CECT 5711]
Length = 357
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 72/131 (54%), Gaps = 11/131 (8%)
Query: 14 NLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKI-SVQ 71
N + I+ W DLW P+L I +V+S R+++G L G S N+ NI +L+ A K+ +
Sbjct: 151 NGSQIQHWNDLWSPKLRNNIMLVDSARDIMGMALISQGHSVNTTNIAELEQAKLKLEGLM 210
Query: 72 QNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLW 130
N+ A++A++ +++ + + + VAV WS + + S++ VVP G++LW
Sbjct: 211 PNVKAVVADEIKMYMAQN--------EAAVAVTWSGEAAEMMANNSHLHYVVPTEGSNLW 262
Query: 131 ADLWAIPAASR 141
D IP ++
Sbjct: 263 FDNLVIPKTAK 273
>gi|294852922|ref|ZP_06793595.1| putrescine transport system substrate-binding protein [Brucella sp.
NVSL 07-0026]
gi|294821511|gb|EFG38510.1| putrescine transport system substrate-binding protein [Brucella sp.
NVSL 07-0026]
Length = 369
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 22/154 (14%)
Query: 3 IAYKKSKFRKH-NLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNS 56
I Y K+K ++ I+ W L+ PE + I +++S E++ L Y+G NS
Sbjct: 140 IGYNKAKIKEALGTDTIDSWDVLFDPEKTAKLKDCGIYLLDSASEMLRPALNYLGLDPNS 199
Query: 57 NN-IDLQVAGGKISVQQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 114
+ DLQ A Q+L L + R F S+ Y+ A GD+ +AVG+S D+ A R
Sbjct: 200 PSPDDLQKA-------QDLYLKIRPNIRKFHSSEYINALANGDICMAVGYSGDIFQARDR 252
Query: 115 MS-------NVAVVVPKSGASLWADLWAIPAASR 141
+ +PK GA +W D AIPA ++
Sbjct: 253 AEKAKQEGVEIGYSIPKEGALIWFDQMAIPADAK 286
>gi|87120811|ref|ZP_01076704.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Marinomonas sp. MED121]
gi|86164039|gb|EAQ65311.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Marinomonas sp. MED121]
Length = 411
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 79/167 (47%), Gaps = 30/167 (17%)
Query: 17 PIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISV 70
P+ W ++ P +A + +S+++SP EV+ L Y+G NS DL+ A IS
Sbjct: 197 PVNSWDLVFDPAIAAKLSDCGVSVLDSPAEVMSVALNYLGLDPNSEKKSDLKKATKLISA 256
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
+ F S+ Y+ G++ V++G++ DVL + R N++ ++PK
Sbjct: 257 SRE------SFTKFSSSQYISDLANGELCVSMGYNGDVLQSQSRAIEAGQGINISYIIPK 310
Query: 125 SGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA 171
G+ +W DL AIPA + + H++I+F LQ A
Sbjct: 311 EGSLVWFDLMAIPADAPHKEAA------------HKFIDFILQPENA 345
>gi|392985122|ref|YP_006483709.1| periplasmic spermidine/putrescine-binding protein [Pseudomonas
aeruginosa DK2]
gi|419752868|ref|ZP_14279273.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa PADK2_CF510]
gi|424940611|ref|ZP_18356374.1| probable periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa NCMG1179]
gi|346057057|dbj|GAA16940.1| probable periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa NCMG1179]
gi|384400764|gb|EIE47122.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa PADK2_CF510]
gi|392320627|gb|AFM66007.1| putative periplasmic spermidine/putrescine-binding protein
[Pseudomonas aeruginosa DK2]
Length = 363
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 73/152 (48%), Gaps = 18/152 (11%)
Query: 3 IAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYN 55
IAY K R + AP++ W +++PE + ++ ++SP EVI VL Y+G S N
Sbjct: 134 IAYNLDKVRAVLGDDAPLDSWDLVFKPENLAKLQQCGVAFLDSPTEVIPEVLHYLGLSPN 193
Query: 56 SNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM 115
S+ + +++LA L F S+ ++ G+V VA+ WS + A R
Sbjct: 194 SHQPE-----DYRRAEEHLAKLRPYITYFSSSKFVSDLANGNVCVAIAWSGGAMQAANRA 248
Query: 116 SN------VAVVVPKSGASLWADLWAIPAASR 141
+ +PK GA+ W D+ AIP ++
Sbjct: 249 REAKNGIRIEYRIPKEGAAAWFDVLAIPRDAK 280
>gi|398868530|ref|ZP_10623927.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM78]
gi|398232984|gb|EJN18932.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM78]
Length = 365
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 18/135 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W ++ PE + ++ ++S E++ +VL YMG NS N D + A K
Sbjct: 153 IDSWAAVFEPENIKKLQSCGVAFLDSADEMMPTVLNYMGLDANSTNPEDYKKAEAK---- 208
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
L + F S+ Y+ GD+ VA+G+S D+ A R + N+A +PK
Sbjct: 209 --LLAVRPYVTYFHSSKYIADLANGDICVAIGFSGDMFQARNRAAEAKKGVNIAYSIPKE 266
Query: 126 GASLWADLWAIPAAS 140
G +LW D+ AIP S
Sbjct: 267 GGALWFDMLAIPKDS 281
>gi|423694163|ref|ZP_17668683.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens SS101]
gi|388000415|gb|EIK61744.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens SS101]
Length = 364
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 18/132 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W L+ PE + +S ++S E++ +VL YMG NS N D + A +
Sbjct: 152 IDSWAVLFEPENMKKLATCGVSFMDSADEMLPAVLNYMGLDPNSTNPADYKKA------E 205
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
+ L + F S+ Y+ G++ VA G+S DV A R + N+A +PK
Sbjct: 206 EKLLKVRPYVTYFHSSKYISDLANGNICVAAGFSGDVFQAKARAAEAGKGVNIAYTIPKE 265
Query: 126 GASLWADLWAIP 137
G +LW D+ AIP
Sbjct: 266 GGNLWFDVLAIP 277
>gi|387774151|ref|ZP_10129423.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
parahaemolyticus HK385]
gi|386902295|gb|EIJ67136.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
parahaemolyticus HK385]
Length = 359
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IA+ + ++ W DLW+PE A +I +++ REV L +G + N+ + +
Sbjct: 147 IAFNTNNYKGDQFT---SWGDLWKPEFANKIQLLDDAREVFNIALLKLGKNPNTTDPEEI 203
Query: 63 VAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVV 122
A + L L F S + +F G+V V W+ V A K + + +V
Sbjct: 204 KAA-----YEELKKLRPNVLSFSSDNPANSFISGEVSVGQLWNGSVRIAKKEQAPIDMVF 258
Query: 123 PKSGASLWADLWAIPAASR 141
PK G LW D AIPA S+
Sbjct: 259 PKEGPVLWVDTLAIPANSK 277
>gi|424909501|ref|ZP_18332878.1| spermidine/putrescine-binding periplasmic protein [Rhizobium
leguminosarum bv. viciae USDA 2370]
gi|392845532|gb|EJA98054.1| spermidine/putrescine-binding periplasmic protein [Rhizobium
leguminosarum bv. viciae USDA 2370]
Length = 365
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 16/136 (11%)
Query: 17 PIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQ 71
P++ W L++PE A + I+++++ E + Y+G + +S AGG + ++
Sbjct: 152 PVDSWDILFKPENAEKLKSCGINILDASDETFAIAMNYLGKNPDSKETADLEAGGDVYMK 211
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
+ + F+S+ Y+ GD + +GWS D+L A R V V+PK
Sbjct: 212 -----IRPYVKTFNSSAYIDELANGDSCITIGWSGDILQAKSRAEEAKNGVEVNYVIPKE 266
Query: 126 GASLWADLWAIPAASR 141
G +W D AIPA ++
Sbjct: 267 GTYMWFDNLAIPADAK 282
>gi|384423359|ref|YP_005632718.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae LMA3984-4]
gi|327486067|gb|AEA80473.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae LMA3984-4]
Length = 343
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 91/220 (41%), Gaps = 28/220 (12%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALL 77
I W DLW + ++ +++ R+V G LK G S N+ N + ++ ++L L
Sbjct: 143 ITKWADLWDKQYEQQVMLIDDIRDVFGMALKLNGFSINTKN-EEEIK----KAYESLVAL 197
Query: 78 ANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 137
L++S + G+ + + W+ + M + V+P+ GA LW D + IP
Sbjct: 198 KKNVLLYNSDAPHVPYVSGEATLGMQWNGNAYQGQVEMPELKFVMPEEGAVLWMDNFTIP 257
Query: 138 AASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEE 197
+ S+ PL H++I F Q Q + SA + LP E
Sbjct: 258 SGSK------------NIPLAHKFINFMYQPENQAEIVQSL---GYASATKGGRALLPAE 302
Query: 198 LLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
L +D I P E + + EF+ + TL+ YE
Sbjct: 303 L------RDNPTI--FPSDEDMKKGEFINDVGPETLAIYE 334
>gi|149204428|ref|ZP_01881395.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Roseovarius sp. TM1035]
gi|149142313|gb|EDM30360.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Roseovarius sp. TM1035]
Length = 362
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 61/111 (54%), Gaps = 11/111 (9%)
Query: 33 ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKA 92
+ +++P E+I LKY+G NS++ D+ GK V+ L + + F+S+ Y+ A
Sbjct: 170 VHFLDAPAEMIPMALKYIGEDPNSHDPDVI---GK--VEDVLMAVRPHIQKFNSSEYINA 224
Query: 93 FGIGDVWVAVGWSSDVLPAVKRM----SNVAVV--VPKSGASLWADLWAIP 137
GD+ VAVGWS D+L A R + V +V PK GA +W D AIP
Sbjct: 225 LANGDICVAVGWSGDILQARDRAAEADNGVEIVYNAPKEGAQMWFDQMAIP 275
>gi|421483896|ref|ZP_15931468.1| putrescine-binding periplasmic protein [Achromobacter piechaudii
HLE]
gi|400197603|gb|EJO30567.1| putrescine-binding periplasmic protein [Achromobacter piechaudii
HLE]
Length = 361
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
+ +W +++PE A + ISM++ +V +VLKY+G NS N D A +
Sbjct: 149 LANWDMIFKPENAAKLKECGISMLDEAAQVFPAVLKYLGKDPNSTNPDDYKAALDV---- 204
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSG 126
L + R F S+ Y+ +GD+ + G+S DV+ A KR V +PK G
Sbjct: 205 -LKQIRPYIRQFSSSGYIDELAVGDLCMVYGFSGDVMIARKRAQEAKKTYEVNYFIPKGG 263
Query: 127 ASLWADLWAIP 137
A W DL IP
Sbjct: 264 APAWFDLMVIP 274
>gi|385333806|ref|YP_005887757.1| spermidine/putrescine ABC transporter substrate-binding protein
[Marinobacter adhaerens HP15]
gi|311696956|gb|ADP99829.1| spermidine/putrescine ABC transporter periplasmic substrate-binding
protein [Marinobacter adhaerens HP15]
Length = 346
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 88/220 (40%), Gaps = 28/220 (12%)
Query: 17 PIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLAL 76
P+ W+DLW GR+ + N REV L+ +G S NS N D A + LA
Sbjct: 144 PVTAWEDLWEDRFDGRVMLTNDMREVFHVGLRVLGYSGNSTNPDEIEAA-----YEKLAE 198
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
L R F+S + G+ V + W+ + + M ++ V P+ G W D + I
Sbjct: 199 LMPSVRTFNSDAPRMPYLEGEADVGMIWNGEAVMGKDTMESLEYVYPEEGIIAWLDSFVI 258
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPE 196
P + P HQ+I F LQ + +E I A+P+ L LP+
Sbjct: 259 PK-----------NAKNPEA-AHQFISFVLQPEISALISEE-IGYATPNLAARDL--LPD 303
Query: 197 ELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDY 236
E+ + S P A + EF + + L Y
Sbjct: 304 EVANNRAS--------YPNATDMINAEFQTDIGDDALQVY 335
>gi|76787391|ref|YP_329814.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Streptococcus agalactiae A909]
gi|406709561|ref|YP_006764287.1| spermidine/putrescine ABC transporter substrate-binding protein
[Streptococcus agalactiae GD201008-001]
gi|424049369|ref|ZP_17786920.1| spermidine/putrescine-binding protein [Streptococcus agalactiae
ZQ0910]
gi|76562448|gb|ABA45032.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Streptococcus
agalactiae A909]
gi|389649040|gb|EIM70525.1| spermidine/putrescine-binding protein [Streptococcus agalactiae
ZQ0910]
gi|406650446|gb|AFS45847.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Streptococcus agalactiae GD201008-001]
Length = 357
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 66/129 (51%), Gaps = 11/129 (8%)
Query: 16 APIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQNL 74
P + W DLWRPE +I +V+S REVIG L +G N+ NI +L+ A K+
Sbjct: 153 TPPKYWDDLWRPEFRNKIMLVDSAREVIGVGLNSLGYGLNTKNISELKAASKKLD----- 207
Query: 75 ALLAN-QARLFDSTHYLKAFGI-GDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWAD 132
AL N +A + D +K + I GD + V +S + + ++ VVP G++LW D
Sbjct: 208 ALTPNVKAIVADE---MKGYMIQGDAAIGVTFSGEAREMLDGNKHLHYVVPSEGSNLWFD 264
Query: 133 LWAIPAASR 141
IP +
Sbjct: 265 NIVIPKTVK 273
>gi|387896228|ref|YP_006326525.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas fluorescens A506]
gi|387164086|gb|AFJ59285.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas fluorescens A506]
Length = 364
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 18/132 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W L+ PE + +S ++S E++ +VL YMG NS N D + A +
Sbjct: 152 IDSWAVLFEPENMKKLATCGVSFMDSADEMLPAVLNYMGLDPNSTNPADYKKA------E 205
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
+ L + F S+ Y+ G++ VA G+S DV A R + N+A +PK
Sbjct: 206 EKLLKVRPYVTYFHSSKYISDLANGNICVAAGFSGDVFQAKARAAEAGKGVNIAYTIPKE 265
Query: 126 GASLWADLWAIP 137
G +LW D+ AIP
Sbjct: 266 GGNLWFDVLAIP 277
>gi|386390018|ref|ZP_10074815.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
paraphrohaemolyticus HK411]
gi|385694060|gb|EIG24686.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
paraphrohaemolyticus HK411]
Length = 359
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IA+ + ++ W DLW+PE A +I +++ REV L +G + N+ + +
Sbjct: 147 IAFNTNNYKGDQFT---SWGDLWKPEFANKIQLLDDAREVFNIALLKLGKNPNTTDPEEI 203
Query: 63 VAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVV 122
A + L L F S + +F G+V V W+ V A K + + +V
Sbjct: 204 KAA-----YEELKKLRPNVLSFSSDNPANSFISGEVSVGQLWNGSVRIAKKEQAPIDMVF 258
Query: 123 PKSGASLWADLWAIPAASR 141
PK G LW D AIPA S+
Sbjct: 259 PKEGPVLWVDTLAIPANSK 277
>gi|260774066|ref|ZP_05882981.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio metschnikovii CIP 69.14]
gi|260611027|gb|EEX36231.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio metschnikovii CIP 69.14]
Length = 344
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 94/222 (42%), Gaps = 32/222 (14%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLAL 76
I W DLW P+ ++ +++ R+V G LK G S N+ N +++ A Q+L
Sbjct: 144 ISRWADLWDPKYVRQVMLIDDMRDVFGMALKLNGFSINTQNEAEIEKA------YQSLVA 197
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
L L++S + G+V + + W+ + + + + V+P+ GA LW D + I
Sbjct: 198 LKRNVLLYNSDAPHVPYVSGEVALGMQWNGNAFQGQEELPELTFVMPEEGAVLWMDNFTI 257
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG-ASPSALETTLVKLP 195
P+ S L H++I F Q + E++ SA ++ L
Sbjct: 258 PSGSN------------NKALAHKFINFMYQAEN----QAEIVNSLGYASATQSGRALLA 301
Query: 196 EELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
+E L+ PS P E + + EF+ + L YE
Sbjct: 302 DE-LRNNPSI-------FPSDEEMQKGEFINDVGPEALVIYE 335
>gi|386014451|ref|YP_005932728.1| PotF [Pseudomonas putida BIRD-1]
gi|313501157|gb|ADR62523.1| PotF [Pseudomonas putida BIRD-1]
Length = 364
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 16/135 (11%)
Query: 18 IEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
I+ W L+ PE ++S ++S E++ +VL YMG + NS + +Q
Sbjct: 152 IDSWAVLFEPENMKKLSKCGVAFLDSADEMLPAVLNYMGLNPNSTD-----PKDYAKAEQ 206
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPA------VKRMSNVAVVVPKSG 126
L + F S+ Y+ GD+ VA G+S DV A K+ N+A +PK G
Sbjct: 207 KLLAVRPYVTYFHSSKYITDLANGDICVAAGFSGDVFQAKARAEEAKKGVNLAYAIPKEG 266
Query: 127 ASLWADLWAIPAASR 141
+LW D+ AIP ++
Sbjct: 267 GNLWFDVLAIPKDAK 281
>gi|406658463|ref|ZP_11066603.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus iniae 9117]
gi|405578678|gb|EKB52792.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Streptococcus iniae 9117]
Length = 357
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 92/217 (42%), Gaps = 30/217 (13%)
Query: 21 WKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQ 80
W+DLWRPE I +++ REV+G L G S NS N Q G V+++L L
Sbjct: 158 WEDLWRPEYRNNIMLIDGAREVMGLGLNTFGYSLNSKN--KQELG---QVKEHLQDLTPN 212
Query: 81 ARLFDSTHYLKAFGI-GDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAA 139
+ + +K + I GD + V +S + + N+ VVP+ G++LW D + P
Sbjct: 213 IKAIVADE-MKGYMIQGDAAIGVTFSGEASEMLDSNKNLHYVVPEEGSNLWFDNFVFPKT 271
Query: 140 SRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELL 199
+ E + + +I F L A E I A+P+ L LP+++
Sbjct: 272 MKHEKEA------------YAFINFMLDPKNAAQ-NAEYIGYATPNNKAKEL--LPDDIK 316
Query: 200 KGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDY 236
K P +I+ + E + L + L Y
Sbjct: 317 NDKAF--------YPSQQIINKLEVYDNLGQYWLGYY 345
>gi|397697187|ref|YP_006535070.1| extracellular solute-binding protein [Pseudomonas putida DOT-T1E]
gi|421523437|ref|ZP_15970066.1| extracellular solute-binding protein [Pseudomonas putida LS46]
gi|397333917|gb|AFO50276.1| extracellular solute-binding protein [Pseudomonas putida DOT-T1E]
gi|402752423|gb|EJX12928.1| extracellular solute-binding protein [Pseudomonas putida LS46]
Length = 364
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 16/135 (11%)
Query: 18 IEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
I+ W L+ PE ++S ++S E++ +VL YMG + NS + +Q
Sbjct: 152 IDSWAVLFEPENMKKLSKCGVAFLDSADEMLPAVLNYMGLNPNSTD-----PKDYAKAEQ 206
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPA------VKRMSNVAVVVPKSG 126
L + F S+ Y+ GD+ VA G+S DV A K+ N+A +PK G
Sbjct: 207 KLLAVRPYVTYFHSSKYITDLANGDICVAAGFSGDVFQAKARAEEAKKGVNLAYAIPKEG 266
Query: 127 ASLWADLWAIPAASR 141
+LW D+ AIP ++
Sbjct: 267 GNLWFDVLAIPKDAK 281
>gi|387893506|ref|YP_006323803.1| periplasmic putrescine-binding protein [Pseudomonas fluorescens
A506]
gi|387164504|gb|AFJ59703.1| periplasmic putrescine-binding protein [Pseudomonas fluorescens
A506]
Length = 362
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 18/133 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQ 71
I+ W L+ PE + ++ ++S E+ ++L YMG S N D + A K
Sbjct: 150 IDSWAVLFEPENIKKLHECGVAFLDSADELFPAILNYMGKDPRSENAEDYKQAEAK---- 205
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
L L F S+ Y+ G++ VA G+S DV A R N+A +PK
Sbjct: 206 --LLTLRPYITYFHSSKYISDLANGNICVAFGYSGDVFQAANRAKEAKNGVNIAYSIPKE 263
Query: 126 GASLWADLWAIPA 138
G++LW DL AIPA
Sbjct: 264 GSNLWFDLLAIPA 276
>gi|308186216|ref|YP_003930347.1| spermidine/putrescine-binding periplasmic protein 2 [Pantoea vagans
C9-1]
gi|390433313|ref|ZP_10221851.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Pantoea agglomerans IG1]
gi|308056726|gb|ADO08898.1| Spermidine/putrescine-binding periplasmic protein 2 precursor
[Pantoea vagans C9-1]
Length = 369
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G N+++ + +G +
Sbjct: 154 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNTSDAK-EYSGAATDL 212
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ G++ VA+GWS D+L A R ++ VPK
Sbjct: 213 ---LLKLRPNIRYFHSSQYINDLANGNICVAIGWSGDILQAKNRADAAKNGVHLGYSVPK 269
Query: 125 SGASLWADLWAIPAASR 141
GA + D+ AIP ++
Sbjct: 270 EGALAFFDMMAIPKDAK 286
>gi|26991856|ref|NP_747281.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas putida KT2440]
gi|24986974|gb|AAN70745.1|AE016718_4 putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas putida KT2440]
Length = 364
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 16/135 (11%)
Query: 18 IEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
I+ W L+ PE ++S ++S E++ +VL YMG + NS + +Q
Sbjct: 152 IDSWAVLFEPENMKKLSKCGVAFLDSADEMLPAVLNYMGLNPNSTD-----PKDYAKAEQ 206
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPA------VKRMSNVAVVVPKSG 126
L + F S+ Y+ GD+ VA G+S DV A K+ N+A +PK G
Sbjct: 207 KLLAVRPYVTYFHSSKYITDLANGDICVAAGFSGDVFQAKARAEEAKKGVNLAYAIPKEG 266
Query: 127 ASLWADLWAIPAASR 141
+LW D+ AIP ++
Sbjct: 267 GNLWFDVLAIPKDAK 281
>gi|419838750|ref|ZP_14362170.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
haemolyticus HK386]
gi|386909978|gb|EIJ74640.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
haemolyticus HK386]
Length = 350
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 70/155 (45%), Gaps = 19/155 (12%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLAL 76
I W DLW+PE G++ M + REV L G S N+ N D++ A ++ L
Sbjct: 151 ITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIKTAYERLE-----KL 205
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
L N A F+S + G+ + + W+ A K ++ V PK GA W D +AI
Sbjct: 206 LPNVAT-FNSDSPEVPYVQGEAAIGMIWNGSAYLAHKENPSLQFVYPKEGAIFWMDNYAI 264
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA 171
P ++ V G H++I+F L+ A
Sbjct: 265 PTTAK--------NVEG----AHKFIDFLLRPENA 287
>gi|395446064|ref|YP_006386317.1| extracellular solute-binding protein [Pseudomonas putida ND6]
gi|388560061|gb|AFK69202.1| extracellular solute-binding protein [Pseudomonas putida ND6]
Length = 364
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 16/135 (11%)
Query: 18 IEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
I+ W L+ PE ++S ++S E++ +VL YMG + NS + +Q
Sbjct: 152 IDSWAVLFEPENMKKLSKCGVAFLDSADEMLPAVLNYMGLNPNSTD-----PKDYAKAEQ 206
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPA------VKRMSNVAVVVPKSG 126
L + F S+ Y+ GD+ VA G+S DV A K+ N+A +PK G
Sbjct: 207 KLLAVRPYVTYFHSSKYITDLANGDICVAAGFSGDVFQAKARAEEAKKGVNLAYAIPKEG 266
Query: 127 ASLWADLWAIPAASR 141
+LW D+ AIP ++
Sbjct: 267 GNLWFDVLAIPKDAK 281
>gi|372276175|ref|ZP_09512211.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Pantoea sp. SL1_M5]
Length = 369
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G N+++ + +G +
Sbjct: 154 APVNSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNTSDAK-EYSGAATDL 212
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ G++ VA+GWS D+L A R ++ VPK
Sbjct: 213 ---LLKLRPNIRYFHSSQYINDLANGNICVAIGWSGDILQAKNRADAAKNGVHLGYSVPK 269
Query: 125 SGASLWADLWAIPAASR 141
GA + D+ AIP ++
Sbjct: 270 EGALAFFDMMAIPKDAK 286
>gi|229590032|ref|YP_002872151.1| putrescine ABC transporter substrate-binding protein [Pseudomonas
fluorescens SBW25]
gi|229361898|emb|CAY48798.1| putrescine ABC transporter, substrate-binding protein [Pseudomonas
fluorescens SBW25]
Length = 362
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 18/133 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W L+ PE + ++ ++S E+ ++L Y+G S N D + A K
Sbjct: 150 IDSWAVLFEPENIKKLNQCGVAFLDSADELFPAILNYLGKDPRSENPEDYKQAEAK---- 205
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
L L F S+ Y+ GD+ VA G+S DV A R N+A +PK
Sbjct: 206 --LLTLRPYITYFHSSKYISDLANGDICVAFGYSGDVFQAANRAKEAKNGVNIAYSIPKE 263
Query: 126 GASLWADLWAIPA 138
G++LW DL AIPA
Sbjct: 264 GSNLWFDLLAIPA 276
>gi|424880107|ref|ZP_18303739.1| spermidine/putrescine-binding periplasmic protein [Rhizobium
leguminosarum bv. trifolii WU95]
gi|392516470|gb|EIW41202.1| spermidine/putrescine-binding periplasmic protein [Rhizobium
leguminosarum bv. trifolii WU95]
Length = 365
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 97/222 (43%), Gaps = 41/222 (18%)
Query: 20 DWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQN 73
+W L+ P A + I M++SP +V+ SVL Y+G + NS + DL+ A Q
Sbjct: 155 NWDALFDPAKAAKLKDCGIYMLDSPTDVVPSVLAYLGLNPNSTDAADLKKA------QAV 208
Query: 74 LALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSGA 127
L + R F S+ Y+ A GD+ +A+G+S D+ A R + V VP GA
Sbjct: 209 LTAVRPFVRKFHSSEYISALANGDICIALGYSGDMFQARDRAAEANAGVKVDYSVPSQGA 268
Query: 128 SLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSAL 187
++ D++ IP + + H++I + + K EV+ AS
Sbjct: 269 QIFFDVFGIPKDAPHVAEA------------HEFINYMM--------KPEVVAKASNFVF 308
Query: 188 ETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLS 229
K ++ L + DT + P E++A+ + PL
Sbjct: 309 YANGNKASQQFLDKEVLDDTAIY---PTPEVMAKLFTVPPLD 347
>gi|417843859|ref|ZP_12489924.1| Spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
haemolyticus M21127]
gi|341948322|gb|EGT74952.1| Spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
haemolyticus M21127]
Length = 350
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 70/155 (45%), Gaps = 19/155 (12%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLAL 76
I W DLW+PE G++ M + REV L G S N+ N D++ A ++ L
Sbjct: 151 ITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIKTAYERLE-----KL 205
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
L N A F+S + G+ + + W+ A K ++ V PK GA W D +AI
Sbjct: 206 LPNVAT-FNSDSPEVPYVQGEAAIGMIWNGSAYLAHKENPSLQFVYPKEGAIFWMDNYAI 264
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA 171
P ++ V G H++I+F L+ A
Sbjct: 265 PTTAK--------NVEG----AHKFIDFLLRPENA 287
>gi|291550273|emb|CBL26535.1| Spermidine/putrescine-binding periplasmic protein [Ruminococcus
torques L2-14]
Length = 625
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 61/122 (50%), Gaps = 7/122 (5%)
Query: 17 PIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID-LQVAGGKISVQQNLA 75
PI+ W LW + I M +S R+ G LKY+G S NS ++D LQ A + Q+ L
Sbjct: 423 PIDSWGVLWDEKYKDSILMQDSVRDAFGVALKYLGYSLNSTDLDELQAAKNLLIEQKPLV 482
Query: 76 LLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWA 135
QA + D K G + + V +S + L + N+ V+PK G++LW D W
Sbjct: 483 ----QAYVIDQVR-DKMIG-NEAALGVIYSGEALYCQQENPNLDYVIPKEGSNLWIDSWV 536
Query: 136 IP 137
IP
Sbjct: 537 IP 538
>gi|402702656|ref|ZP_10850635.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas fragi A22]
Length = 364
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 18/135 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W +++PE + ++ ++S E++ +VL Y+G NS N D + A +
Sbjct: 152 IDSWDLVFKPENMKKLQSCGVAFLDSADEMLPTVLNYLGLDPNSTNPKDYKKA------E 205
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPA------VKRMSNVAVVVPKS 125
L + F S+ Y+ G++ VA+G+S DV A K+ N+A +VPK
Sbjct: 206 ATLMSVRPYVTYFHSSKYISDLANGNICVAIGFSGDVFQAKARAEEAKKGVNIAYIVPKE 265
Query: 126 GASLWADLWAIPAAS 140
G +LW D+ AIP S
Sbjct: 266 GGALWFDMLAIPKDS 280
>gi|421319887|ref|ZP_15770445.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1038(11)]
gi|395924775|gb|EJH35577.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1038(11)]
Length = 336
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 92/220 (41%), Gaps = 28/220 (12%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALL 77
I W DLW + ++ +++ R+V G LK G S N+ N + ++ ++L L
Sbjct: 136 ITKWADLWDKQYEQQVMLIDDIRDVFGMALKLNGFSINTKN-EEEIK----KAYESLVAL 190
Query: 78 ANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 137
L++S + G+ + + W+ + M + V+P+ GA LW D + IP
Sbjct: 191 KKNVLLYNSDAPHVPYVSGEATLGMQWNGNAYQGQVEMPELKFVMPEEGAVLWMDNFTIP 250
Query: 138 AASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEE 197
+ S K I PL H++I F Q Q + SA + LP E
Sbjct: 251 SGS----KNI--------PLAHKFINFMYQPENQAEIVQSL---GYASATKGGRALLPAE 295
Query: 198 LLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
L +D I P E + + EF+ + TL+ YE
Sbjct: 296 L------RDNPTI--FPSDEDMKKGEFINDVGPETLAIYE 327
>gi|254467215|ref|ZP_05080626.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Rhodobacterales bacterium Y4I]
gi|206688123|gb|EDZ48605.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Rhodobacterales bacterium Y4I]
Length = 387
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 30/164 (18%)
Query: 16 APIEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
API+ + ++ PE +++ +++P E+I + LKY+G NS + D+ +
Sbjct: 173 APIDSLELVFNPEYMEKLASCGVHFLDAPDEMIPAALKYIGEDPNSMDADVVEKAEPV-- 230
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L + F S+ Y+ A GD+ VA GWS D+L A R +A PK
Sbjct: 231 ---LMAVRPYVTKFHSSEYINALANGDICVAFGWSGDILQARDRADEADNGVEIAFNAPK 287
Query: 125 SGASLWADLWAIPAASRLETKQIGGRVRGPSPL-IHQWIEFCLQ 167
GA +W D AIP V P+P H+++ F +
Sbjct: 288 EGALMWFDQMAIP-------------VDAPNPDGAHKFLNFIMD 318
>gi|359781089|ref|ZP_09284314.1| extracellular solute-binding protein [Pseudomonas psychrotolerans
L19]
gi|359371149|gb|EHK71715.1| extracellular solute-binding protein [Pseudomonas psychrotolerans
L19]
Length = 366
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 20/138 (14%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGG-KI 68
AP++ W +++PE + ++M++SP +++ VL Y+G NS N D + A +
Sbjct: 152 APVDSWDLVFKPENMAKLKSCGVAMLDSPSDILPVVLHYLGLDPNSANAKDYEKATALML 211
Query: 69 SVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLP---AVKRMSNVAVV---V 122
++ +A F+ST Y+ GD+ VAVG+S K N VV +
Sbjct: 212 KIRPYMAY-------FNSTKYMTDIANGDICVAVGYSGSFYQFGNRAKEAGNGVVVDWRL 264
Query: 123 PKSGASLWADLWAIPAAS 140
P+ GA +W D WAIPA++
Sbjct: 265 PREGAPIWFDTWAIPASA 282
>gi|302380568|ref|ZP_07269033.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Finegoldia
magna ACS-171-V-Col3]
gi|302311511|gb|EFK93527.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Finegoldia
magna ACS-171-V-Col3]
Length = 341
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 15/174 (8%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNS-NNIDL 61
I Y K+K ++ ++ W LW + I M+NS R+ +G LK +G S NS N+ +L
Sbjct: 131 ILYNKNKVKEK----VDSWNILWDEKYKDNIIMMNSTRDTLGVALKRLGYSMNSRNDAEL 186
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ A + Q++L L A L D T D +AV +S D + + N+ V
Sbjct: 187 EKAKQSLIKQKDLVL----AYLVDETKTQMVNEEAD--LAVMYSGDAIVSKGENENLEYV 240
Query: 122 VPKSGASLWADLWAI--PAASRLETKQIGGRVRGP--SPLIHQWIEFCLQTARA 171
+PK G++LW D AI A ++ ++ + P + L ++I + L + +A
Sbjct: 241 IPKEGSNLWFDTLAILKNAKNKENAEKFINFMTNPENAKLNAEYIGYSLPSTKA 294
>gi|229526354|ref|ZP_04415758.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae bv. albensis VL426]
gi|422910303|ref|ZP_16944943.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-09]
gi|424660148|ref|ZP_18097396.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-16]
gi|229336512|gb|EEO01530.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio cholerae bv. albensis VL426]
gi|341633624|gb|EGS58420.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-09]
gi|408051055|gb|EKG86173.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HE-16]
Length = 343
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 91/220 (41%), Gaps = 28/220 (12%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALL 77
I W DLW + ++ +++ R+V G LK G S N+ N + ++ ++L L
Sbjct: 143 ITKWADLWDKQYEQQVMLIDDIRDVFGMALKLNGFSINTKN-EEEIK----KAYESLVAL 197
Query: 78 ANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 137
L++S + G+ + + W+ + M+ + V+P+ GA LW D + IP
Sbjct: 198 KKNVLLYNSDAPHVPYVSGEATLGMQWNGNAYQGQVEMAELKFVMPEEGAVLWMDNFTIP 257
Query: 138 AASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEE 197
+ S+ PL H++I F Q Q + SA + LP E
Sbjct: 258 SGSK------------NIPLAHKFINFMYQPENQAEIVQTL---GYASATKGGRAILPAE 302
Query: 198 LLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
L +D I P E + + EF + TL+ YE
Sbjct: 303 L------RDNPTI--FPSDEDMKKGEFTNDVGPETLAIYE 334
>gi|418362030|ref|ZP_12962674.1| ABC-type putrescine transporter, periplasmic binding protein
[Aeromonas salmonicida subsp. salmonicida 01-B526]
gi|356686665|gb|EHI51258.1| ABC-type putrescine transporter, periplasmic binding protein
[Aeromonas salmonicida subsp. salmonicida 01-B526]
Length = 353
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 18/133 (13%)
Query: 18 IEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W ++ PE ++S ++S E+I +VL Y+G NS+ D++ A +
Sbjct: 141 IDSWAVIFEPENMQKLSRCGVAFLDSADEMIPAVLNYLGLDPNSHKPEDIKRA------E 194
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
+ L + F S+ Y+ GD+ VA G+S D+L A R N+A +PK
Sbjct: 195 EQLLKVRPYVTYFHSSKYIGDLANGDICVAAGFSGDILQAAARADEAGKGINIAYSIPKE 254
Query: 126 GASLWADLWAIPA 138
G +LW D+ AIPA
Sbjct: 255 GGNLWFDMMAIPA 267
>gi|426410011|ref|YP_007030110.1| putrescine-binding periplasmic protein [Pseudomonas sp. UW4]
gi|426268228|gb|AFY20305.1| putrescine-binding periplasmic protein [Pseudomonas sp. UW4]
Length = 365
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 93/202 (46%), Gaps = 26/202 (12%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP W L++PE A + IS ++SP E+I + L Y+G Y N+ D Q I+
Sbjct: 151 APTNSWDLLFKPENAEKLKACGISFLDSPTEMIPTALHYLG--YPVNDQDKQ----HIAQ 204
Query: 71 QQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVP 123
Q L + + F S+ Y+ G++ VAVG+S DVL A R + +P
Sbjct: 205 AQALFMKIRPNVAYFHSSKYISDLANGNICVAVGYSGDVLQAKARAQEAGDKVKIDYSIP 264
Query: 124 KSGASLWADLWAIP--AASRLETKQIGGRVRGPSPL--IHQWIEFCLQTARALPFKQEVI 179
K GA+ + D+ A+P AA+ + P + I I + A A P E I
Sbjct: 265 KEGAASFYDMLAMPRDAANVENAYLFMNFLMRPDVIADITNNIGYSNANAAATPLVDEAI 324
Query: 180 ---PGASPS-ALETTLVKLPEE 197
PG+ PS A+ L +P++
Sbjct: 325 RNEPGSYPSEAVMAKLYAVPDQ 346
>gi|395649101|ref|ZP_10436951.1| putrescine ABC transporter substrate-binding periplasmic protein
[Pseudomonas extremaustralis 14-3 substr. 14-3b]
Length = 364
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 65/132 (49%), Gaps = 18/132 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W L+ PE + +S ++S E++ +VL YMG + NS N D + A K
Sbjct: 152 IDSWAVLFEPENMKKLASCGVSFMDSADEMLPAVLNYMGLNPNSTNPEDYKKAEAK---- 207
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
L + F S+ Y+ G++ VA G+S DV A R S N+A +PK
Sbjct: 208 --LLKVRPYVTYFHSSKYISDLANGNICVAAGFSGDVFQAKARASEAGKGVNIAYAIPKE 265
Query: 126 GASLWADLWAIP 137
G +LW D+ AIP
Sbjct: 266 GGNLWFDVLAIP 277
>gi|399543357|ref|YP_006556665.1| Spermidine/putrescine-binding periplasmic protein [Marinobacter sp.
BSs20148]
gi|399158689|gb|AFP29252.1| Spermidine/putrescine-binding periplasmic protein [Marinobacter sp.
BSs20148]
Length = 348
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 17/138 (12%)
Query: 12 KHNLAP--IEDWKDLWRP--ELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGK 67
+ +L P + W DL +P EL G+ISM+ ++IG+ LK +G S NS N D
Sbjct: 137 RRDLVPFAVSSWMDLLQPIEELHGKISMIGDSADMIGAALKALGYSLNSTNED------- 189
Query: 68 ISVQQNLALLANQARLFDSTHYL-----KAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVV 122
++ ALL QA ++ YL A G V +++ ++ D + N+A V+
Sbjct: 190 -EMKDAEALLEAQAPAVNTYRYLSLNEDSALLNGQVVMSMMYNGDTRMLQEYNDNIAFVL 248
Query: 123 PKSGASLWADLWAIPAAS 140
PK G ++W D ++ +AS
Sbjct: 249 PKEGGNIWTDYLSVLSAS 266
>gi|94502154|ref|ZP_01308654.1| extracellular solute-binding protein, family 1 [Oceanobacter sp.
RED65]
gi|94425725|gb|EAT10733.1| extracellular solute-binding protein, family 1 [Oceanobacter sp.
RED65]
Length = 350
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 28/196 (14%)
Query: 33 ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQARLFDSTHYLKA 92
I +V E+ + L Y+G N+ + + G + +++ +A A+ ST Y
Sbjct: 166 IGLVYERDELFAAALIYLGYPINTKDPEQLDTAGSL-LKETVA----DAKYVHSTQYTDD 220
Query: 93 FGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASRLETKQIGGRVR 152
G G + V VG+S D+L ++ ++ +P+ GAS+W D+ AIP+ S E K++ R+
Sbjct: 221 LGAGKICVGVGYSGDILAEMESNPAISYNIPREGASMWFDMMAIPSNS--ENKELAYRL- 277
Query: 153 GPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVG 212
I F L T + I A P+ ++T + E+L+ K
Sbjct: 278 ---------INF-LSTPKIAGTNSNYI--AYPTPVDTAKAFVDAEILEDKTI-------- 317
Query: 213 VPPAEILARCEFLEPL 228
P EILAR + PL
Sbjct: 318 YPSQEILARLQAFAPL 333
>gi|373466353|ref|ZP_09557671.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
sp. oral taxon 851 str. F0397]
gi|371760719|gb|EHO49392.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
sp. oral taxon 851 str. F0397]
Length = 350
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 70/155 (45%), Gaps = 19/155 (12%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLAL 76
I W DLW+PE G++ M + REV L G S N+ N D++ A ++ L
Sbjct: 151 ITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIRTAYERLE-----KL 205
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
L N A F+S + G+ + + W+ A K ++ V PK GA W D +AI
Sbjct: 206 LPNVAT-FNSDSPEVPYVQGEAAIGMIWNGSAYLAHKENPSLQFVYPKEGAIFWMDNYAI 264
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA 171
P ++ V G H++I+F L+ A
Sbjct: 265 PTTAK--------NVEG----AHKFIDFLLRPENA 287
>gi|229549230|ref|ZP_04437955.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecalis ATCC
29200]
gi|255971945|ref|ZP_05422531.1| extracellular solute-binding protein [Enterococcus faecalis T1]
gi|256957883|ref|ZP_05562054.1| extracellular solute-binding protein [Enterococcus faecalis DS5]
gi|300860252|ref|ZP_07106339.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Enterococcus
faecalis TUSoD Ef11]
gi|312953676|ref|ZP_07772513.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0102]
gi|384519446|ref|YP_005706751.1| Spermidine/putrescine ABC transporter, substrate binding protein
[Enterococcus faecalis 62]
gi|422693431|ref|ZP_16751445.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0031]
gi|422710807|ref|ZP_16767742.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0027]
gi|422725774|ref|ZP_16782231.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0312]
gi|428767801|ref|YP_007153912.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Enterococcus faecalis str. Symbioflor 1]
gi|229305467|gb|EEN71463.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecalis ATCC
29200]
gi|255962963|gb|EET95439.1| extracellular solute-binding protein [Enterococcus faecalis T1]
gi|256948379|gb|EEU65011.1| extracellular solute-binding protein [Enterococcus faecalis DS5]
gi|300849291|gb|EFK77041.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Enterococcus
faecalis TUSoD Ef11]
gi|310628514|gb|EFQ11797.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0102]
gi|315035159|gb|EFT47091.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0027]
gi|315151943|gb|EFT95959.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0031]
gi|315159176|gb|EFU03193.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0312]
gi|323481579|gb|ADX81018.1| Spermidine/putrescine ABC transporter, substrate binding protein
[Enterococcus faecalis 62]
gi|427185974|emb|CCO73198.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Enterococcus faecalis str. Symbioflor 1]
Length = 357
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 68/127 (53%), Gaps = 11/127 (8%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNS-NNIDLQVAGGKISVQQN--L 74
I+ W DLWRPEL + +++ REV+G L +G S NS N+ L+ A K++ N
Sbjct: 155 IQHWDDLWRPELKNNVMLIDGAREVLGLSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVK 214
Query: 75 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 134
A++A++ +++ + + VAV +S + ++ ++ V+P G++LW D
Sbjct: 215 AIVADEIKMYMANE--------ESAVAVTFSGEAAEMLENNEHLHYVIPSEGSNLWFDNI 266
Query: 135 AIPAASR 141
+P ++
Sbjct: 267 VMPKTAK 273
>gi|29377133|ref|NP_816287.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Enterococcus faecalis V583]
gi|227554141|ref|ZP_03984188.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecalis
HH22]
gi|256853954|ref|ZP_05559319.1| spermidine/putrescine ABC transporter [Enterococcus faecalis T8]
gi|257084376|ref|ZP_05578737.1| extracellular solute-binding protein [Enterococcus faecalis Fly1]
gi|257420047|ref|ZP_05597041.1| extracellular solute-binding protein [Enterococcus faecalis T11]
gi|307290343|ref|ZP_07570258.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0411]
gi|422684915|ref|ZP_16743140.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX4000]
gi|422701166|ref|ZP_16759007.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX1342]
gi|422712163|ref|ZP_16768939.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0309A]
gi|422715506|ref|ZP_16772225.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0309B]
gi|422720055|ref|ZP_16776678.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0017]
gi|422731739|ref|ZP_16788090.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0645]
gi|422741529|ref|ZP_16795554.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX2141]
gi|29344599|gb|AAO82357.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Enterococcus
faecalis V583]
gi|227176767|gb|EEI57739.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecalis
HH22]
gi|256710897|gb|EEU25940.1| spermidine/putrescine ABC transporter [Enterococcus faecalis T8]
gi|256992406|gb|EEU79708.1| extracellular solute-binding protein [Enterococcus faecalis Fly1]
gi|257161875|gb|EEU91835.1| extracellular solute-binding protein [Enterococcus faecalis T11]
gi|295113614|emb|CBL32251.1| Spermidine/putrescine-binding periplasmic protein [Enterococcus sp.
7L76]
gi|306498536|gb|EFM68038.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0411]
gi|315030300|gb|EFT42232.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX4000]
gi|315032776|gb|EFT44708.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0017]
gi|315143826|gb|EFT87842.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX2141]
gi|315162146|gb|EFU06163.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0645]
gi|315170420|gb|EFU14437.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX1342]
gi|315576248|gb|EFU88439.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0309B]
gi|315582893|gb|EFU95084.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0309A]
Length = 357
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 68/127 (53%), Gaps = 11/127 (8%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNS-NNIDLQVAGGKISVQQN--L 74
I+ W DLWRPEL + +++ REV+G L +G S NS N+ L+ A K++ N
Sbjct: 155 IQHWDDLWRPELKNNVMLIDGAREVLGLSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVK 214
Query: 75 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 134
A++A++ +++ + + VAV +S + ++ ++ V+P G++LW D
Sbjct: 215 AIVADEIKMYMANE--------ESAVAVTFSGEAAEMLENNEHLHYVIPSEGSNLWFDNI 266
Query: 135 AIPAASR 141
+P ++
Sbjct: 267 VMPKTAK 273
>gi|407478190|ref|YP_006792067.1| extracellular solute-binding protein family 1 [Exiguobacterium
antarcticum B7]
gi|407062269|gb|AFS71459.1| Extracellular solute-binding protein family 1 [Exiguobacterium
antarcticum B7]
Length = 357
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 34/227 (14%)
Query: 21 WKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN-SNNIDLQVAGGKI-SVQQNL-ALL 77
WKDLW P L +I + + REV+G L +G S N ++ LQ A + + N+ A++
Sbjct: 158 WKDLWDPALKNQILLADGAREVMGMSLNSLGYSLNETDETKLQAAKANLMKLTPNVKAIV 217
Query: 78 ANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 137
++ +L + + GIG V WS D + N+ V+PK G+++W D IP
Sbjct: 218 GDEIKLLLAN---EEAGIG-----VVWSGDANEIMSENENLNYVIPKEGSNVWFDNIVIP 269
Query: 138 AASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEE 197
+ K I G HQ+I F L+ A + + ++P+ T +K
Sbjct: 270 KTA----KNIDGA--------HQFINFMLEPKNAAK-NADYVGYSTPN---TAALK---- 309
Query: 198 LLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVADLQ 244
LL + +D P E+ E E L + L+ Y L + +
Sbjct: 310 LLDREVREDERF---YPDKEVTDTLEVYENLGKEMLAHYNELFLEFK 353
>gi|256963762|ref|ZP_05567933.1| extracellular solute-binding protein [Enterococcus faecalis
HIP11704]
gi|257416832|ref|ZP_05593826.1| extracellular solute-binding protein [Enterococcus faecalis
ARO1/DG]
gi|307271709|ref|ZP_07552980.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0855]
gi|256954258|gb|EEU70890.1| extracellular solute-binding protein [Enterococcus faecalis
HIP11704]
gi|257158660|gb|EEU88620.1| extracellular solute-binding protein [Enterococcus faecalis
ARO1/DG]
gi|306511587|gb|EFM80586.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0855]
Length = 357
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 68/127 (53%), Gaps = 11/127 (8%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNS-NNIDLQVAGGKISVQQN--L 74
I+ W DLWRPEL + +++ REV+G L +G S NS N+ L+ A K++ N
Sbjct: 155 IQHWDDLWRPELKNNVMLIDGAREVLGLSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVK 214
Query: 75 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 134
A++A++ +++ + + VAV +S + ++ ++ V+P G++LW D
Sbjct: 215 AIVADEIKMYMANE--------ESAVAVTFSGEAAEMLENNEHLHYVIPSEGSNLWFDNI 266
Query: 135 AIPAASR 141
+P ++
Sbjct: 267 VMPKTAK 273
>gi|256616843|ref|ZP_05473689.1| extracellular solute-binding protein [Enterococcus faecalis ATCC
4200]
gi|307276893|ref|ZP_07558003.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX2134]
gi|421514559|ref|ZP_15961247.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Enterococcus faecalis ATCC 29212]
gi|256596370|gb|EEU15546.1| extracellular solute-binding protein [Enterococcus faecalis ATCC
4200]
gi|306506316|gb|EFM75476.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX2134]
gi|401672347|gb|EJS78817.1| ABC transporter, periplasmic spermidine putrescine-binding protein
PotD [Enterococcus faecalis ATCC 29212]
Length = 357
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 68/127 (53%), Gaps = 11/127 (8%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNS-NNIDLQVAGGKISVQQN--L 74
I+ W DLWRPEL + +++ REV+G L +G S NS N+ L+ A K++ N
Sbjct: 155 IQHWDDLWRPELKNNVMLIDGAREVLGLSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVK 214
Query: 75 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 134
A++A++ +++ + + VAV +S + ++ ++ V+P G++LW D
Sbjct: 215 AIVADEIKMYMANE--------ESAVAVTFSGEAAEMLENNEHLHYVIPSEGSNLWFDNI 266
Query: 135 AIPAASR 141
+P ++
Sbjct: 267 VMPKTAK 273
>gi|425902196|ref|ZP_18878787.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas chlororaphis subsp. aureofaciens 30-84]
gi|397881644|gb|EJK98133.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas chlororaphis subsp. aureofaciens 30-84]
Length = 364
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Query: 18 IEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
I+ W L+ PE ++S ++S E++ +VL YMG NS N D +
Sbjct: 152 IDSWAMLFEPENIKKLSSCGVAFLDSADEMLPAVLNYMGLDPNSQNPD-----DYKKAEA 206
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSG 126
L + F+S+ Y+ G++ VA G+S DV A R + +A V+PK G
Sbjct: 207 KLLAVRPYVTYFNSSKYISDLANGEICVAAGFSGDVFQAKARAAEAGKGIEIAYVIPKEG 266
Query: 127 ASLWADLWAIP 137
+LW D+ AIP
Sbjct: 267 GNLWFDMLAIP 277
>gi|392945801|ref|ZP_10311443.1| spermidine/putrescine-binding periplasmic protein [Frankia sp. QA3]
gi|392289095|gb|EIV95119.1| spermidine/putrescine-binding periplasmic protein [Frankia sp. QA3]
Length = 423
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 9/136 (6%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGAS-YNSNNIDL 61
IAY +K + I + DL+ P+ AG++ M +++ L G S D
Sbjct: 210 IAYDPAKTGRE----ITSYDDLFDPKFAGKVGMFGDNQDLPNLALLGTGVDPAKSTPDDW 265
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ A K++ Q+ ++ R + Y+ A GD+W+++ WS DV + +N+ V
Sbjct: 266 KKAAAKLTAQRRDGIV----RKYYDQSYIDALAGGDLWISMAWSGDVYQQIATGTNLKFV 321
Query: 122 VPKSGASLWADLWAIP 137
VP G LW D IP
Sbjct: 322 VPAEGGLLWTDNMCIP 337
>gi|419828281|ref|ZP_14351772.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-1A2]
gi|419833202|ref|ZP_14356663.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-61A2]
gi|422312585|ref|ZP_16396240.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1035(8)]
gi|422917159|ref|ZP_16951486.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-02A1]
gi|423820186|ref|ZP_17716089.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-55C2]
gi|423853555|ref|ZP_17719881.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-59A1]
gi|423880885|ref|ZP_17723483.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-60A1]
gi|423997575|ref|ZP_17740833.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-02C1]
gi|424016282|ref|ZP_17756122.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-55B2]
gi|424019223|ref|ZP_17759018.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-59B1]
gi|424624766|ref|ZP_18063237.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-50A1]
gi|424629267|ref|ZP_18067563.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-51A1]
gi|424633298|ref|ZP_18071407.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-52A1]
gi|424636390|ref|ZP_18074404.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-55A1]
gi|424640327|ref|ZP_18078216.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-56A1]
gi|424648362|ref|ZP_18086031.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-57A1]
gi|443527187|ref|ZP_21093250.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-78A1]
gi|341638136|gb|EGS62790.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-02A1]
gi|408013893|gb|EKG51580.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-50A1]
gi|408019323|gb|EKG56722.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-52A1]
gi|408024628|gb|EKG61723.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-56A1]
gi|408025295|gb|EKG62357.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-55A1]
gi|408034500|gb|EKG70995.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-57A1]
gi|408056925|gb|EKG91795.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-51A1]
gi|408614575|gb|EKK87845.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae CP1035(8)]
gi|408623354|gb|EKK96308.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-1A2]
gi|408635445|gb|EKL07637.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-55C2]
gi|408642066|gb|EKL13823.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-60A1]
gi|408642945|gb|EKL14687.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-59A1]
gi|408650526|gb|EKL21801.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-61A2]
gi|408853217|gb|EKL93014.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-02C1]
gi|408860984|gb|EKM00587.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-55B2]
gi|408868574|gb|EKM07897.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-59B1]
gi|443454281|gb|ELT18085.1| bacterial extracellular solute-binding family protein [Vibrio
cholerae HC-78A1]
Length = 343
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 91/220 (41%), Gaps = 28/220 (12%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALL 77
I W DLW + ++ +++ R+V G LK G S N+ N + ++ ++L L
Sbjct: 143 ITKWADLWDKQYEQQVMLIDDIRDVFGMALKLNGFSINTKN-EEEIK----KAYESLVAL 197
Query: 78 ANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 137
L++S + G+ + + W+ + M + V+P+ GA LW D + IP
Sbjct: 198 KKNVLLYNSDAPHVPYVSGEATLGMQWNGNAYQGQVEMPELKFVMPEEGAVLWMDNFTIP 257
Query: 138 AASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEE 197
+ S+ PL H++I F Q Q + SA + LP E
Sbjct: 258 SGSK------------NIPLAHKFINFMYQPENQAEVVQSL---GYASATKGGRALLPAE 302
Query: 198 LLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
L +D I P E + + EF+ + TL+ YE
Sbjct: 303 L------RDNPTI--FPSDEDMKKGEFINDVGPETLAIYE 334
>gi|241889938|ref|ZP_04777236.1| spermidine/putrescine-binding periplasmic protein PotD [Gemella
haemolysans ATCC 10379]
gi|241863560|gb|EER67944.1| spermidine/putrescine-binding periplasmic protein PotD [Gemella
haemolysans ATCC 10379]
Length = 359
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 80/185 (43%), Gaps = 22/185 (11%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN-SNNIDL 61
I Y K+K + E W DLW L I +++ RE++G L+ G S N +N ++L
Sbjct: 142 ILYDKTKVPED--LKFEKWNDLWDARLENNILLIDGAREMMGIALQSEGNSVNDTNEVNL 199
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+A ++ L LL + +S + WV+V +S D ++ N+
Sbjct: 200 NLA------EKKLELLHPNIKAINSDEKKMLMINNEAWVSVVFSGDAKSIMEENENMVYA 253
Query: 122 VPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG 181
+PK G +LW D IP S+ E +++I F L+ A E I
Sbjct: 254 LPKEGTNLWFDNIVIPKTSKNEEAA------------YKFINFMLKPENAAK-NSEFIGY 300
Query: 182 ASPSA 186
A+P+
Sbjct: 301 ATPNG 305
>gi|389682707|ref|ZP_10174045.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas chlororaphis O6]
gi|388553435|gb|EIM16690.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas chlororaphis O6]
Length = 364
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Query: 18 IEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
I+ W L+ PE ++S ++S E++ +VL YMG NS N D +
Sbjct: 152 IDSWAMLFEPENIKKLSSCGVAFLDSADEMLPAVLNYMGLDPNSQNPD-----DYKKAEA 206
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSG 126
L + F+S+ Y+ G++ VA G+S DV A R + +A V+PK G
Sbjct: 207 KLLAVRPYVTYFNSSKYISDLANGEICVAAGFSGDVFQAKARAAEAGKGIEIAYVIPKEG 266
Query: 127 ASLWADLWAIP 137
+LW D+ AIP
Sbjct: 267 GNLWFDMLAIP 277
>gi|388468131|ref|ZP_10142341.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas synxantha BG33R]
gi|388011711|gb|EIK72898.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas synxantha BG33R]
Length = 364
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 18/132 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W L+ PE + +S ++S E++ +VL YMG NS N D + A +
Sbjct: 152 IDSWAVLFEPENMKKLATCGVSFMDSADEMLPAVLNYMGLDPNSTNPADYKKA------E 205
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
+ L + F S+ Y+ G++ VA G+S DV A R + N+A +PK
Sbjct: 206 EKLLKVRPYVTYFHSSKYISDLANGNICVAAGFSGDVFQAKARAAEAGKGVNIAYAIPKE 265
Query: 126 GASLWADLWAIP 137
G +LW D+ AIP
Sbjct: 266 GGNLWFDVLAIP 277
>gi|381405138|ref|ZP_09929822.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Pantoea sp. Sc1]
gi|380738337|gb|EIB99400.1| putrescine transporter subunit: periplasmic-binding component of
ABC superfamily [Pantoea sp. Sc1]
Length = 369
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 19/145 (13%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W + +PE + +S +++P E+ +VL Y+G NS++ +G +
Sbjct: 154 APLNSWDLVMKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSSDAK-DYSGAATDL 212
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L L R F S+ Y+ G++ VA+GWS D+L A R ++ VPK
Sbjct: 213 ---LLKLRPNIRYFHSSQYINDLANGNICVAIGWSGDILQAKNRADAAKNGVHLGYSVPK 269
Query: 125 SGASLWADLWAIPAASRLETKQIGG 149
GA + D+ AIP + K I G
Sbjct: 270 EGALAFFDMMAIPK----DAKNIDG 290
>gi|422724570|ref|ZP_16781046.1| putative spermidine/putrescine-binding periplasmic protein PotD,
partial [Enterococcus faecalis TX2137]
gi|315025577|gb|EFT37509.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX2137]
Length = 367
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 68/127 (53%), Gaps = 11/127 (8%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNS-NNIDLQVAGGKISVQQN--L 74
I+ W DLWRPEL + +++ REV+G L +G S NS N+ L+ A K++ N
Sbjct: 155 IQHWDDLWRPELKNNVMLIDGAREVLGLSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVK 214
Query: 75 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 134
A++A++ +++ + + VAV +S + ++ ++ V+P G++LW D
Sbjct: 215 AIVADEIKMYMANE--------ESAVAVTFSGEAAEMLENNEHLHYVIPSEGSNLWFDNI 266
Query: 135 AIPAASR 141
+P ++
Sbjct: 267 VMPKTAK 273
>gi|339482351|ref|YP_004694137.1| extracellular solute-binding protein family 1 [Nitrosomonas sp.
Is79A3]
gi|338804496|gb|AEJ00738.1| extracellular solute-binding protein family 1 [Nitrosomonas sp.
Is79A3]
Length = 371
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 110/239 (46%), Gaps = 39/239 (16%)
Query: 2 VIAYKKSKFRKHNLAPIEDWKDLWRPE----LAGRISMVNSPREVIGSVLKYMGASYNSN 57
++ + +K ++ L P + W ++ PE + GR+++++SPRE++ + L Y+G Y +N
Sbjct: 146 LLGFNTNKVQELGL-PTDTWAIIFEPEYLQKIKGRVTVLDSPRELMAAALLYLG--YAAN 202
Query: 58 NIDLQVAGGKISVQQNLALLANQA---RLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKR 114
+ D ++ Q L+ F +T Y++ IGD+WV G+S+D+ A
Sbjct: 203 DQD------EVHWNQAKELIIRAKPYWAAFSNTSYIREIAIGDLWVVHGYSNDLFQA--- 253
Query: 115 MSNVAVVVPKSGASLWADLWAIP---AASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA 171
A+ K+G D +AIP A L++ + + P L HQ+I F L +
Sbjct: 254 ----ALDAKKTGRHFTID-YAIPKQGAVMSLDSMVLHKSGKHPG-LAHQFINFMLDGKNS 307
Query: 172 LPFKQEVIPGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSE 230
+I +P+ ++ ELL+ K V P E L+R E + L+
Sbjct: 308 AELTN-LIGSGNPNIDAKPFIR--PELLQNK--------VIFPDEESLSRLEMITDLNH 355
>gi|152999700|ref|YP_001365381.1| extracellular solute-binding protein [Shewanella baltica OS185]
gi|151364318|gb|ABS07318.1| extracellular solute-binding protein family 1 [Shewanella baltica
OS185]
Length = 366
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 18/137 (13%)
Query: 16 APIEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKIS 69
AP + ++ P+ A +IS M++S +++ L Y+G NS+N D + AG
Sbjct: 152 APFNSMELIFNPKYAEKISKCGFAMLDSADDMVPQALIYLGLDPNSSNPSDYEKAG---- 207
Query: 70 VQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM------SNVAVVVP 123
+ L ++ F S+ Y+ GD+ VA G+S DV A R + + +P
Sbjct: 208 --ELLEIIRPYVTYFHSSRYISDLANGDICVAFGFSGDVFQAKARAEEAGNGNKIGYSIP 265
Query: 124 KSGASLWADLWAIPAAS 140
K GA+LW D+ AIPA S
Sbjct: 266 KEGANLWFDMLAIPADS 282
>gi|229544963|ref|ZP_04433688.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecalis
TX1322]
gi|229309855|gb|EEN75842.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecalis
TX1322]
Length = 357
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 68/127 (53%), Gaps = 11/127 (8%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNS-NNIDLQVAGGKISVQQN--L 74
I+ W DLWRPEL + +++ REV+G L +G S NS N+ L+ A K++ N
Sbjct: 155 IQHWDDLWRPELKNNVMLIDGAREVLGLSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVK 214
Query: 75 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 134
A++A++ +++ + + VAV +S + ++ ++ V+P G++LW D
Sbjct: 215 AIVADEIKMYMANE--------ESAVAVTFSGEAAEMLENNEHLHYVIPSEGSNLWFDNI 266
Query: 135 AIPAASR 141
+P ++
Sbjct: 267 VMPKTAK 273
>gi|227519669|ref|ZP_03949718.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecalis
TX0104]
gi|424677622|ref|ZP_18114473.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV103]
gi|424680384|ref|ZP_18117191.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV116]
gi|424684841|ref|ZP_18121550.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV129]
gi|424687545|ref|ZP_18124181.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV25]
gi|424690852|ref|ZP_18127381.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV31]
gi|424693828|ref|ZP_18130240.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV37]
gi|424698568|ref|ZP_18134851.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV41]
gi|424701209|ref|ZP_18137385.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV62]
gi|424705404|ref|ZP_18141456.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV63]
gi|424706470|ref|ZP_18142473.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV65]
gi|424717522|ref|ZP_18146812.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV68]
gi|424719423|ref|ZP_18148570.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV72]
gi|424723843|ref|ZP_18152797.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV73]
gi|424728208|ref|ZP_18156820.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV81]
gi|424734849|ref|ZP_18163330.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV85]
gi|424750919|ref|ZP_18178974.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV93]
gi|227072893|gb|EEI10856.1| spermidine/putrescine ABC superfamily ATP binding cassette
transporter, binding protein [Enterococcus faecalis
TX0104]
gi|402354118|gb|EJU88933.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV103]
gi|402354612|gb|EJU89418.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV116]
gi|402360329|gb|EJU94932.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV129]
gi|402363223|gb|EJU97715.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV31]
gi|402363828|gb|EJU98285.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV25]
gi|402371717|gb|EJV05864.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV41]
gi|402372422|gb|EJV06543.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV62]
gi|402372588|gb|EJV06701.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV37]
gi|402379302|gb|EJV13115.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV63]
gi|402384678|gb|EJV18221.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV68]
gi|402387632|gb|EJV21105.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV65]
gi|402394436|gb|EJV27609.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV81]
gi|402396334|gb|EJV29397.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV72]
gi|402396922|gb|EJV29965.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV73]
gi|402405698|gb|EJV38284.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV85]
gi|402406149|gb|EJV38712.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis ERV93]
Length = 357
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 68/127 (53%), Gaps = 11/127 (8%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNS-NNIDLQVAGGKISVQQN--L 74
I+ W DLWRPEL + +++ REV+G L +G S NS N+ L+ A K++ N
Sbjct: 155 IQHWDDLWRPELKNNVMLIDGAREVLGLSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVK 214
Query: 75 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 134
A++A++ +++ + + VAV +S + ++ ++ V+P G++LW D
Sbjct: 215 AIVADEIKMYMANE--------ESAVAVTFSGEAAEMLENNEHLHYVIPSEGSNLWFDNI 266
Query: 135 AIPAASR 141
+P ++
Sbjct: 267 VMPKTAK 273
>gi|440739397|ref|ZP_20918911.1| putrescine ABC transporter substrate-binding periplasmic protein
[Pseudomonas fluorescens BRIP34879]
gi|447918914|ref|YP_007399482.1| putrescine ABC transporter substrate-binding periplasmic protein
[Pseudomonas poae RE*1-1-14]
gi|440379593|gb|ELQ16183.1| putrescine ABC transporter substrate-binding periplasmic protein
[Pseudomonas fluorescens BRIP34879]
gi|445202777|gb|AGE27986.1| putrescine ABC transporter substrate-binding periplasmic protein
[Pseudomonas poae RE*1-1-14]
Length = 364
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 18/132 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W L+ PE + +S ++S E++ +VL YMG NS N D + A +
Sbjct: 152 IDSWAVLFEPENMKKLASCGVSFMDSADEMLPAVLNYMGLDPNSTNPADYKKA------E 205
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
+ L + F S+ Y+ G++ VA G+S DV A R + N+A +PK
Sbjct: 206 EKLLKVRPYVTYFHSSKYISDLANGNICVAAGFSGDVFQAKARAAEAGKGVNIAYAIPKE 265
Query: 126 GASLWADLWAIP 137
G +LW D+ AIP
Sbjct: 266 GGNLWFDVLAIP 277
>gi|37679874|ref|NP_934483.1| ABC-type spermidine/putrescine-binding periplasmic protein [Vibrio
vulnificus YJ016]
gi|37198619|dbj|BAC94454.1| ABC-type spermidine/putrescine-binding periplasmic protein [Vibrio
vulnificus YJ016]
Length = 350
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 97/217 (44%), Gaps = 30/217 (13%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALL 77
+++W DLW + AG++ +++ REV L +G S N+ N D A + L L
Sbjct: 150 VKNWGDLWDTQWAGQLMLMDDAREVFHIALSKLGYSPNTTNPDEIKAA-----YEELKKL 204
Query: 78 ANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 137
+F+S + G+V + + W+ A + + + ++ P+ GA W D AIP
Sbjct: 205 IPNVLVFNSDFPANPYLAGEVSLGMLWNGSAYMARQEGAKIDIIWPEKGAIFWMDSLAIP 264
Query: 138 AASR-LETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPE 196
A ++ +E H+ I+F L+ A E+ P+ ++T LP+
Sbjct: 265 AGAKNIEAA-------------HKMIDFLLRPENAAKIAMEI---GYPTPVKTAYKLLPK 308
Query: 197 ELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATL 233
E ++D N+ PP ++ + + + EA++
Sbjct: 309 EF-----AEDKNIF---PPQSVMDNGVWQDEVGEASV 337
>gi|417845005|ref|ZP_12491038.1| Spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
haemolyticus M21639]
gi|341955897|gb|EGT82342.1| Spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
haemolyticus M21639]
Length = 350
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 70/155 (45%), Gaps = 19/155 (12%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLAL 76
I W DLW+PE G++ M + REV L G S N+ N D++ A ++ L
Sbjct: 151 ITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIKTAYERLE-----KL 205
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
L N A F+S + G+ + + W+ A K ++ V PK GA W D +AI
Sbjct: 206 LPNIAT-FNSDSPEVPYVQGEAAIGMIWNGSAYLAHKENPSLQFVYPKEGAIFWMDNYAI 264
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA 171
P ++ V G H++I+F L+ A
Sbjct: 265 PTTAK--------NVEG----AHKFIDFLLRPENA 287
>gi|222147628|ref|YP_002548585.1| ABC transporter substrate binding protein (putrescine)
[Agrobacterium vitis S4]
gi|221734616|gb|ACM35579.1| ABC transporter substrate binding protein (putrescine)
[Agrobacterium vitis S4]
Length = 371
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 16/135 (11%)
Query: 18 IEDWKDLWRPELAGRI-----SMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
++ W +++PE A ++ +++++ E + Y+G +S AG K+
Sbjct: 159 VDSWDFIFKPENAKKLKQCGLNILDASDETFAIAMNYIGKPADSKKTADLEAGAKV---- 214
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSG 126
+ A+ F+S+ YL GD+ +GWS DV+ A KR +A V+PK G
Sbjct: 215 -YQAIRPSAKTFNSSSYLNDLANGDICATIGWSGDVIQAKKRAEEAKNGVEIAYVIPKEG 273
Query: 127 ASLWADLWAIPAASR 141
+W D AIPA ++
Sbjct: 274 TYMWFDNLAIPADAK 288
>gi|399001732|ref|ZP_10704442.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM18]
gi|398126856|gb|EJM16279.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM18]
Length = 365
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 89/203 (43%), Gaps = 30/203 (14%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W L++PE A + IS ++SP E++ + L Y+G NS + K +
Sbjct: 151 APVNSWDLLFKPENAAKLKACGISFLDSPTEMLPAALHYLGYPVNSRD--------KAQI 202
Query: 71 QQNLALLAN---QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVV 121
+ AL F S+ Y+ G++ VAVG+S DVL A R +
Sbjct: 203 AEAEALFMKIRPSVAYFHSSKYISDLANGNICVAVGYSGDVLQAKARAQEAGDKVKIEYS 262
Query: 122 VPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPL--IHQWIEFCLQTARALPFKQE 177
+PK GA + D+ AIP AA+ + P + + I + A A P E
Sbjct: 263 IPKEGAGSFYDMVAIPRDAANVDNAYLFMNFLMRPDIIAEVTNSIGYSNANAAATPLVDE 322
Query: 178 VI---PGAS-PSALETTLVKLPE 196
I PG+ P A+ TL +P+
Sbjct: 323 AIRDDPGSYPPQAVMATLYAIPD 345
>gi|406707040|ref|YP_006757392.1| extracellular solute-binding protein [alpha proteobacterium HIMB59]
gi|406652816|gb|AFS48215.1| extracellular solute-binding protein [alpha proteobacterium HIMB59]
Length = 354
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 17/133 (12%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
+E W ++ P+ + ++M+++P EV+ L Y+G N+ N ++
Sbjct: 144 VESWDIIFNPDEISKYADCGVAMLDAPSEVVEIALNYLGYDPNTENTKAN--------EE 195
Query: 73 NLALLAN---QARLFDSTHYLKAFGIGDVWVAVGWSSDV-LPAVKRMSNVAVVVPKSGAS 128
L LL + FDS+ Y+ G++ +AVGWS DV + A + + V +P G
Sbjct: 196 ALELLKQIRPYIKYFDSSQYIDDLANGEICLAVGWSGDVFIAAYEEIEEVWYSIPNEGTV 255
Query: 129 LWADLWAIPAASR 141
+W D+ IPA ++
Sbjct: 256 IWFDMMGIPADAK 268
>gi|398848447|ref|ZP_10605262.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM84]
gi|398248364|gb|EJN33781.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM84]
Length = 364
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 16/135 (11%)
Query: 18 IEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
I+ W L+ PE ++S ++S E++ +VL YMG + NS + A ++
Sbjct: 152 IDSWAVLFEPENMKKLSKCGVAFLDSADEMLPAVLNYMGLNPNSTD-----AKDYEKAEK 206
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPA------VKRMSNVAVVVPKSG 126
L + F S+ Y+ GD+ VA G+S DV A K+ N+A +PK G
Sbjct: 207 KLLAVRPYVTYFHSSKYITDLANGDICVAAGFSGDVFQAKARAEEAKKGVNLAYAIPKEG 266
Query: 127 ASLWADLWAIPAASR 141
+LW D+ AIP ++
Sbjct: 267 GNLWFDVLAIPKDAK 281
>gi|312902419|ref|ZP_07761625.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0635]
gi|310634089|gb|EFQ17372.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0635]
Length = 357
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 68/127 (53%), Gaps = 11/127 (8%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNS-NNIDLQVAGGKISVQQN--L 74
I+ W DLWRPEL + +++ REV+G L +G S NS N+ L+ A K++ N
Sbjct: 155 IQHWHDLWRPELKNNVMLIDGAREVLGLSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVK 214
Query: 75 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 134
A++A++ +++ + + VAV +S + ++ ++ V+P G++LW D
Sbjct: 215 AIVADEIKMYMANE--------ESAVAVTFSGEAAEMLENNEHLHYVIPSEGSNLWFDNI 266
Query: 135 AIPAASR 141
+P ++
Sbjct: 267 VMPKTAK 273
>gi|442804688|ref|YP_007372837.1| spermidine/putrescine transport system substarte-binding protein
PotD [Clostridium stercorarium subsp. stercorarium DSM
8532]
gi|442740538|gb|AGC68227.1| spermidine/putrescine transport system substarte-binding protein
PotD [Clostridium stercorarium subsp. stercorarium DSM
8532]
Length = 352
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 98/223 (43%), Gaps = 42/223 (18%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALL 77
++ W LW + AG+I M++S R+ IG LK +G S N+ + + ++Q LL
Sbjct: 149 VDSWDILWNEKYAGKILMLDSMRDTIGVALKKLGYSLNTTDTE--------KLEQAKQLL 200
Query: 78 ANQARLFDSTHY--LKAFGI-GDVWVAVGWSSDVLPAV-KRMSNVAVVVPKSGASLWADL 133
Q L + + +K I GD +AV WS + + + + VVPK G++LW D
Sbjct: 201 IQQRPLVNGYYVDEIKDMMINGDAAIAVDWSGSAMDIYWEGIDYIKYVVPKEGSNLWFDC 260
Query: 134 WAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPG-ASP--SALETT 190
IP S+ + + +I F L A ++ + G ASP A E
Sbjct: 261 MVIPKTSQHKKEA------------EMFINFMLDPENA--YQNSLYVGYASPVTEAFERI 306
Query: 191 LVKLPE--ELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEA 231
+ + PE E+ PS+ E+L +CE L ++
Sbjct: 307 MQENPEVAEMDAYNPSE-----------EVLDKCEVFIDLGDS 338
>gi|330501319|ref|YP_004378188.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01]
gi|328915605|gb|AEB56436.1| extracellular solute-binding protein [Pseudomonas mendocina NK-01]
Length = 363
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 16/134 (11%)
Query: 18 IEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
I+ W L+ PE ++S ++S E+I ++L Y+G NS N D +
Sbjct: 151 IDSWAVLFEPENIKKLSQCGVAFLDSGDEMIPAMLNYLGMDPNSTNPD-----DYAKAEA 205
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSG 126
L + F S+ Y+ G++ VA G+S D+L A R +A +PK G
Sbjct: 206 KLLEVRPYVTYFHSSKYIGDLANGNICVAAGFSGDILQAADRAEEAGKGIEIAYSIPKEG 265
Query: 127 ASLWADLWAIPAAS 140
A+LW D+ AIPA S
Sbjct: 266 ANLWFDMMAIPADS 279
>gi|358457960|ref|ZP_09168174.1| extracellular solute-binding protein family 1 [Frankia sp. CN3]
gi|357078747|gb|EHI88192.1| extracellular solute-binding protein family 1 [Frankia sp. CN3]
Length = 438
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 9/136 (6%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGAS-YNSNNIDL 61
IAY K + I ++DL+ P+ AG + M ++ L +G + S D
Sbjct: 225 IAYDPDKTGRE----ITSYEDLFDPKFAGHVGMFGDNLDLPNLALVGIGVNPEKSTPDDW 280
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ A K++ Q+ ++ R + + Y+ A GD+W+++ WS DV V N+ V
Sbjct: 281 KKAAEKLNKQRTDGIV----RKYYTQDYIDALASGDLWISMAWSGDVYQQVAEGKNLRFV 336
Query: 122 VPKSGASLWADLWAIP 137
VPK G LW D IP
Sbjct: 337 VPKEGGILWTDNLCIP 352
>gi|70733210|ref|YP_262983.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas protegens Pf-5]
gi|68347509|gb|AAY95115.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas protegens Pf-5]
Length = 364
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 30/162 (18%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W L+ PE + ++ ++S E++ +VL Y+G + NS N D + A +
Sbjct: 152 IDSWSVLFEPENIKKLNSCGVAFLDSADEMMPTVLNYLGLNANSTNPQDYKKA------E 205
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
L + F S+ Y+ G++ VA+G+S DV A R + N+A +PK
Sbjct: 206 ATLLAVRPYVTYFHSSKYISDLANGNICVAIGFSGDVFQAKARAADAGKGVNIAYAIPKE 265
Query: 126 GASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQ 167
G +LW D+ AIP S KQ H +I + LQ
Sbjct: 266 GGALWFDMLAIPKDST-NVKQ-----------AHAFINYLLQ 295
>gi|398908920|ref|ZP_10654281.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
gi|398188983|gb|EJM76268.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM49]
Length = 365
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W ++ PE + ++ ++S E++ +VL YMG + NS N D + A K
Sbjct: 153 IDSWAAVFEPENIKKLNSCGVAFLDSADEMMPTVLNYMGLNANSTNPEDYKKAEAK---- 208
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
L + F S+ Y+ GD+ +A+G+S D+ A R + N+A +PK
Sbjct: 209 --LLAVRPYVTYFHSSKYIADLANGDICIAIGFSGDMFQARNRAAEAKKGVNIAYSIPKE 266
Query: 126 GASLWADLWAIPAAS 140
G +LW D+ AIP S
Sbjct: 267 GGALWFDMLAIPKDS 281
>gi|392423252|ref|YP_006459856.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri CCUG 29243]
gi|390985440|gb|AFM35433.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas stutzeri CCUG 29243]
Length = 365
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 87/188 (46%), Gaps = 23/188 (12%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W +++PE + +S ++SP E++ + L Y+G + +S D ++ +
Sbjct: 151 APVDSWDLVFKPENIEKLKSCGVSFLDSPTEILPAALHYLGYAPDSGKADELKKAEELFM 210
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
Q + F S+ Y+ G+ VA+G+S D+ A R NV +PK
Sbjct: 211 Q-----IRPHVAYFHSSKYISDLANGESCVAIGYSGDIYQAKARAEEAGNGVNVGYKIPK 265
Query: 125 SGASLWADLWAIPA-ASRLETKQIG-GRVRGPSPL--IHQWIEFCLQTARALPFKQEVI- 179
GA + D+ A+PA A +E+ + + P + I +++F A A P E I
Sbjct: 266 EGAGSFFDMLAVPADAKNVESAHVFINYLMKPEVMASITDYVQFPNGNAAATPLVDEAIR 325
Query: 180 --PGASPS 185
PG P+
Sbjct: 326 TDPGIYPN 333
>gi|329767050|ref|ZP_08258578.1| hypothetical protein HMPREF0428_00275 [Gemella haemolysans M341]
gi|328837775|gb|EGF87400.1| hypothetical protein HMPREF0428_00275 [Gemella haemolysans M341]
Length = 359
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 78/181 (43%), Gaps = 22/181 (12%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN-SNNIDLQVAGGKISVQQNLAL 76
E W DLW LA I +++ RE++G L+ G S N +N ++L +A ++ L L
Sbjct: 155 FEKWNDLWDTRLANNILLIDGAREMMGIALQSEGNSVNDTNEVNLNLA------ERKLEL 208
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
L + ++ + W +V +S D + N+ +PK G +LW D I
Sbjct: 209 LHPNVKAINADEKKMLMINNEAWASVVFSGDAKAIMGENENMVYALPKEGTNLWFDNIVI 268
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPE 196
P S+ E +++I F L+ A E I A+P+ L LPE
Sbjct: 269 PKTSKNEEAA------------YKFINFMLKPENAAK-NSEFIGYATPNTKAKEL--LPE 313
Query: 197 E 197
E
Sbjct: 314 E 314
>gi|325263841|ref|ZP_08130574.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium sp.
D5]
gi|324030879|gb|EGB92161.1| spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein [Clostridium sp.
D5]
Length = 627
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 11/128 (8%)
Query: 17 PIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQN--- 73
PI+ W LW + I M +S R+ G LKY+G S NS ++D A K+ ++Q
Sbjct: 425 PIDSWSVLWDEKYKDSILMQDSVRDAFGVTLKYLGYSLNSTDLDELEAAKKLLIEQKPLV 484
Query: 74 LALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADL 133
A + +Q R K G + + V +S + L ++ V+PK G++LW D
Sbjct: 485 QAYVVDQVR-------DKMIG-NEAAIGVIYSGEALYTQVENPDLEYVIPKEGSNLWIDS 536
Query: 134 WAIPAASR 141
W IP ++
Sbjct: 537 WVIPKNAK 544
>gi|255974999|ref|ZP_05425585.1| extracellular solute-binding protein [Enterococcus faecalis T2]
gi|256961096|ref|ZP_05565267.1| extracellular solute-binding protein [Enterococcus faecalis Merz96]
gi|293384042|ref|ZP_06629936.1| spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis R712]
gi|293386855|ref|ZP_06631425.1| spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis S613]
gi|307285507|ref|ZP_07565646.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0860]
gi|312908008|ref|ZP_07766991.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis DAPTO 512]
gi|312978464|ref|ZP_07790202.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis DAPTO 516]
gi|422729370|ref|ZP_16785771.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0012]
gi|424757827|ref|ZP_18185555.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis R508]
gi|255967871|gb|EET98493.1| extracellular solute-binding protein [Enterococcus faecalis T2]
gi|256951592|gb|EEU68224.1| extracellular solute-binding protein [Enterococcus faecalis Merz96]
gi|291078522|gb|EFE15886.1| spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis R712]
gi|291083689|gb|EFE20652.1| spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis S613]
gi|306502731|gb|EFM71996.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0860]
gi|310626099|gb|EFQ09382.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis DAPTO 512]
gi|311288613|gb|EFQ67169.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis DAPTO 516]
gi|315149971|gb|EFT93987.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0012]
gi|402406292|gb|EJV38850.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis R508]
Length = 357
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 68/127 (53%), Gaps = 11/127 (8%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNS-NNIDLQVAGGKISVQQN--L 74
I+ W DLWRPEL + +++ REV+G L +G S NS N+ L+ A K++ N
Sbjct: 155 IQHWDDLWRPELKNNVMLIDGAREVLGLSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVK 214
Query: 75 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 134
A++A++ +++ + + VAV +S + ++ ++ V+P G++LW D
Sbjct: 215 AIVADEIKMYMANE--------ESAVAVTFSGEAAEMLENNEHLHYVIPSEGSNLWFDNI 266
Query: 135 AIPAASR 141
+P ++
Sbjct: 267 VMPKTAK 273
>gi|46143264|ref|ZP_00204425.1| COG0687: Spermidine/putrescine-binding periplasmic protein
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
Length = 259
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
Query: 21 WKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQ 80
W DLW+PE A ++ +++ REV L +G + N+ N + A + L L
Sbjct: 62 WGDLWKPEFANKVQLLDDAREVFNIALLKLGKNPNTTNPEEIKAA-----YEELRKLRPN 116
Query: 81 ARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 140
F S + +F G+V V W+ V A K + V +V PK G LW D AIPA +
Sbjct: 117 VLSFTSDNPANSFIAGEVSVGQLWNGSVRIAKKEQAPVNMVFPKEGPVLWVDTLAIPANA 176
Query: 141 R 141
+
Sbjct: 177 K 177
>gi|256763281|ref|ZP_05503861.1| extracellular solute-binding protein [Enterococcus faecalis T3]
gi|257081834|ref|ZP_05576195.1| extracellular solute-binding protein [Enterococcus faecalis E1Sol]
gi|257087625|ref|ZP_05581986.1| extracellular solute-binding protein [Enterococcus faecalis D6]
gi|257090787|ref|ZP_05585148.1| extracellular solute-binding protein [Enterococcus faecalis CH188]
gi|422687689|ref|ZP_16745860.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0630]
gi|424672163|ref|ZP_18109144.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis 599]
gi|256684532|gb|EEU24227.1| extracellular solute-binding protein [Enterococcus faecalis T3]
gi|256989864|gb|EEU77166.1| extracellular solute-binding protein [Enterococcus faecalis E1Sol]
gi|256995655|gb|EEU82957.1| extracellular solute-binding protein [Enterococcus faecalis D6]
gi|256999599|gb|EEU86119.1| extracellular solute-binding protein [Enterococcus faecalis CH188]
gi|315579171|gb|EFU91362.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0630]
gi|402357208|gb|EJU91922.1| putrescine ABC transporter, periplasmic spermidine [Enterococcus
faecalis 599]
Length = 357
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 68/127 (53%), Gaps = 11/127 (8%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNS-NNIDLQVAGGKISVQQN--L 74
I+ W DLWRPEL + +++ REV+G L +G S NS N+ L+ A K++ N
Sbjct: 155 IQHWDDLWRPELKNNVMLIDGAREVLGLSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVK 214
Query: 75 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 134
A++A++ +++ + + VAV +S + ++ ++ V+P G++LW D
Sbjct: 215 AIVADEIKMYMANE--------ESAVAVTFSGEAAEMLENNEHLHYVIPSEGSNLWFDNI 266
Query: 135 AIPAASR 141
+P ++
Sbjct: 267 VMPKTAK 273
>gi|30249825|ref|NP_841895.1| solute-binding family 1 protein [Nitrosomonas europaea ATCC 19718]
gi|30180862|emb|CAD85784.1| Bacterial extracellular solute-binding protein, family 1
[Nitrosomonas europaea ATCC 19718]
Length = 369
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 52/232 (22%)
Query: 17 PIEDWKDLWRPE----LAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
P + W ++ PE + GR+++++S RE++ + LKY+G Y++++ D + QQ
Sbjct: 158 PTDSWAIIFEPEYLKKIKGRVTVLDSQRELLAAALKYLG--YSAHDTD------EAHWQQ 209
Query: 73 NLALLANQA---RLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVK------RMSNVAVVVP 123
L+ F++T Y++ +G++WVA G+S+D+ A + R ++ V+P
Sbjct: 210 AKTLIIRAKPYWAAFNNTSYIRELAVGNLWVAHGYSNDMFQAAQDAKKTGRQFSIDFVIP 269
Query: 124 KSGASLWADLWAIPAASRLETKQIGGRVRGPSP-LIHQWIEFCLQTARALPFKQEVIPGA 182
K GA L D + + G P L H++I F L+
Sbjct: 270 KEGAVLSLDSMVLHRS-------------GHRPDLAHRFINFMLE--------------G 302
Query: 183 SPSALETTLVKLPEELLKGKPSQDTNLIVG---VPPAEILARCEFLEPLSEA 231
SA T L L +P +I P A +R E LE ++
Sbjct: 303 ENSAELTNLTGSGNPNLDARPHIHPEIIANPAIFPDAAQFSRLEMLEDINHT 354
>gi|422300669|ref|ZP_16388180.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas avellanae BPIC 631]
gi|407987082|gb|EKG29964.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas avellanae BPIC 631]
Length = 364
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 66/136 (48%), Gaps = 18/136 (13%)
Query: 18 IEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W L+ PE ++S ++S E++ ++L Y+G S NS N D + A K
Sbjct: 152 IDSWSVLFEPENIKKLSSCGVAFLDSADEMLPAMLNYLGLSPNSTNEADYKKAEAK---- 207
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKS 125
L + F S+ Y+ GD+ VA G+S DV A R +A +PK
Sbjct: 208 --LLAIRPYVTYFHSSKYITDLANGDICVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKE 265
Query: 126 GASLWADLWAIPAASR 141
G +LW D+ AIPA S+
Sbjct: 266 GGNLWFDMLAIPADSK 281
>gi|257079820|ref|ZP_05574181.1| extracellular solute-binding protein [Enterococcus faecalis JH1]
gi|294779472|ref|ZP_06744868.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis PC1.1]
gi|256987850|gb|EEU75152.1| extracellular solute-binding protein [Enterococcus faecalis JH1]
gi|294453429|gb|EFG21835.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis PC1.1]
Length = 357
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 68/127 (53%), Gaps = 11/127 (8%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNS-NNIDLQVAGGKISVQQN--L 74
I+ W DLWRPEL + +++ REV+G L +G S NS N+ L+ A K++ N
Sbjct: 155 IQHWDDLWRPELKNNVMLIDGAREVLGLSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVK 214
Query: 75 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 134
A++A++ +++ + + VAV +S + ++ ++ V+P G++LW D
Sbjct: 215 AIVADEIKMYMANE--------ESAVAVTFSGEAAEMLENNEHLHYVIPSEGSNLWFDNI 266
Query: 135 AIPAASR 141
+P ++
Sbjct: 267 VMPKTAK 273
>gi|398928686|ref|ZP_10663639.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
gi|398168075|gb|EJM56101.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM48]
Length = 365
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W ++ PE + ++ ++S E++ +VL YMG + NS N D + A K
Sbjct: 153 IDSWAAVFEPENIKKLNSCGVAFLDSADEMMPTVLNYMGLNANSTNPEDYKKAEAK---- 208
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
L + F S+ Y+ GD+ +A+G+S D+ A R + N+A +PK
Sbjct: 209 --LLAVRPYVTYFHSSKYIADLANGDICIAIGFSGDMFQARNRAAEAKKGVNIAYSIPKE 266
Query: 126 GASLWADLWAIPAAS 140
G +LW D+ AIP S
Sbjct: 267 GGALWFDMLAIPKDS 281
>gi|350270463|ref|YP_004881771.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Oscillibacter valericigenes Sjm18-20]
gi|348595305|dbj|BAK99265.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Oscillibacter valericigenes Sjm18-20]
Length = 357
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 98/224 (43%), Gaps = 28/224 (12%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALL 77
I W L+ P+ AG++ M+N+ R+ IG LK +G SYN+ + + +QQ +
Sbjct: 156 ITSWDALFDPKYAGQVLMINNSRDAIGVALKDLGYSYNTTDQAQITEAVNLLIQQKKDGI 215
Query: 78 ANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 137
QA + D + K G G+ + V ++ D L ++ VVP G++++ D IP
Sbjct: 216 V-QAYVMDEI-FDKLEG-GEAAIGVYYAGDYLTMHDNNPDLTFVVPSEGSNIFTDAMCIP 272
Query: 138 AASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEE 197
A + Q G ++I F T + + + T L+ + +
Sbjct: 273 AGA---ANQENGE---------KFINFMCSTEVGVANCEAI-------GYSTPLMSVKDA 313
Query: 198 LLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLS--DYEWL 239
L P+ +N V P +LA CE L +ATL D EWL
Sbjct: 314 L---DPAITSN-PVAYPSDAVLASCEPFLNLPDATLKFYDSEWL 353
>gi|320156351|ref|YP_004188730.1| spermidine/putrescine ABC transporter substrate-binding protein
[Vibrio vulnificus MO6-24/O]
gi|319931663|gb|ADV86527.1| ABC transporter periplasmic spermidine putrescine-binding protein
PotD [Vibrio vulnificus MO6-24/O]
Length = 345
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 97/217 (44%), Gaps = 30/217 (13%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALL 77
+++W DLW + AG++ +++ REV L +G S N+ N D A + L L
Sbjct: 145 VKNWGDLWDTQWAGQLMLMDDAREVFHIALSKLGYSPNTTNPDEIKAA-----YEELKKL 199
Query: 78 ANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 137
+F+S + G+V + + W+ A + + + ++ P+ GA W D AIP
Sbjct: 200 IPNVLVFNSDFPANPYLAGEVSLGMLWNGSAYMARQEGAKIDIIWPEKGAIFWMDSLAIP 259
Query: 138 AASR-LETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPE 196
A ++ +E H+ I+F L+ A E+ P+ ++T LP+
Sbjct: 260 AGAKNIEAA-------------HKMIDFLLRPENAAKIAMEI---GYPTPVKTAYKLLPK 303
Query: 197 ELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATL 233
E ++D N+ PP ++ + + + EA++
Sbjct: 304 EF-----AEDQNIF---PPQSVMDNGVWQDEVGEASV 332
>gi|422586173|ref|ZP_16661192.1| putrescine ABC transporter periplasmic putrescine-binding protein,
partial [Pseudomonas syringae pv. morsprunorum str.
M302280]
gi|330880486|gb|EGH14635.1| putrescine ABC transporter periplasmic putrescine-binding protein,
partial [Pseudomonas syringae pv. morsprunorum str.
M302280]
Length = 359
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 66/136 (48%), Gaps = 18/136 (13%)
Query: 18 IEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W L+ PE ++S ++S E++ ++L Y+G S NS N D + A K
Sbjct: 152 IDSWSVLFEPENIKKLSSCGVAFLDSADEMLPAMLNYLGLSPNSTNEADYKKAEAK---- 207
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKS 125
L + F S+ Y+ GD+ VA G+S DV A R +A +PK
Sbjct: 208 --LLAIRPYVTYFHSSKYITDLANGDICVAAGFSGDVFQAKARAEEAGKGVKLAYSIPKE 265
Query: 126 GASLWADLWAIPAASR 141
G +LW D+ AIPA S+
Sbjct: 266 GGNLWFDMLAIPADSK 281
>gi|312900019|ref|ZP_07759336.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0470]
gi|311292776|gb|EFQ71332.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0470]
Length = 357
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 68/127 (53%), Gaps = 11/127 (8%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNS-NNIDLQVAGGKISVQQN--L 74
I+ W DLWRPEL + +++ REV+G L +G S NS N+ L+ A K++ N
Sbjct: 155 IQHWDDLWRPELKNNVMLIDGAREVLGLSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVK 214
Query: 75 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 134
A++A++ +++ + + VAV +S + ++ ++ V+P G++LW D
Sbjct: 215 AIVADEIKMYMANE--------ESAVAVTFSGEAAEMLENNEHLHYVIPSEGSNLWFDNI 266
Query: 135 AIPAASR 141
+P ++
Sbjct: 267 VMPKTAK 273
>gi|307270639|ref|ZP_07551930.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX4248]
gi|307287531|ref|ZP_07567574.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0109]
gi|397700780|ref|YP_006538568.1| spermidine/putrescine ABC transporter, substrate binding protein
[Enterococcus faecalis D32]
gi|422693944|ref|ZP_16751949.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX4244]
gi|422703511|ref|ZP_16761331.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX1302]
gi|306501269|gb|EFM70572.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX0109]
gi|306512949|gb|EFM81590.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX4248]
gi|315148619|gb|EFT92635.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX4244]
gi|315164929|gb|EFU08946.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX1302]
gi|397337419|gb|AFO45091.1| spermidine/putrescine ABC transporter, substrate binding protein
[Enterococcus faecalis D32]
Length = 357
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 68/127 (53%), Gaps = 11/127 (8%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNS-NNIDLQVAGGKISVQQN--L 74
I+ W DLWRPEL + +++ REV+G L +G S NS N+ L+ A K++ N
Sbjct: 155 IQHWDDLWRPELKNNVMLIDGAREVLGLSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVK 214
Query: 75 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 134
A++A++ +++ + + VAV +S + ++ ++ V+P G++LW D
Sbjct: 215 AIVADEIKMYMANE--------ESAVAVTFSGEAAEMLENNEHLHYVIPSEGSNLWFDNI 266
Query: 135 AIPAASR 141
+P ++
Sbjct: 267 VMPKTAK 273
>gi|417840447|ref|ZP_12486581.1| Spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
haemolyticus M19107]
gi|341948206|gb|EGT74838.1| Spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
haemolyticus M19107]
Length = 350
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 70/155 (45%), Gaps = 19/155 (12%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQNLAL 76
I W DLW+PE G++ M + REV L G S N+ N D++ A ++ L
Sbjct: 151 ITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEGDIKTAYERLE-----KL 205
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
L N A F+S + G+ + + W+ A K ++ V PK GA W D +AI
Sbjct: 206 LPNIAT-FNSDSPEVPYVQGEAAIGMIWNGSAYLAQKENPSLQFVYPKEGAIFWMDNYAI 264
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA 171
P ++ V G H++I+F L+ A
Sbjct: 265 PTTAK--------NVEG----AHKFIDFLLRPENA 287
>gi|388542821|ref|ZP_10146113.1| protein SpuD/PotF1 [Pseudomonas sp. M47T1]
gi|388278907|gb|EIK98477.1| protein SpuD/PotF1 [Pseudomonas sp. M47T1]
Length = 365
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 18/134 (13%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W +++PE A + IS ++SP E+I + L Y+G ++ N D +I
Sbjct: 151 APVNSWDLVFKPENAAKLKGCGISFLDSPTEMIPAALHYLGFKTDTQNKD------EIKK 204
Query: 71 QQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVP 123
++L L + F S+ Y+ G++ VAVG+S DV A R +V+ +P
Sbjct: 205 AEDLFLKIRPSIAYFHSSKYISDLANGNICVAVGYSGDVKQAASRAKEAGDKVHVSYSIP 264
Query: 124 KSGASLWADLWAIP 137
K GA + D+ AIP
Sbjct: 265 KEGAGSFYDMVAIP 278
>gi|242278796|ref|YP_002990925.1| extracellular solute-binding protein [Desulfovibrio salexigens DSM
2638]
gi|242121690|gb|ACS79386.1| extracellular solute-binding protein family 1 [Desulfovibrio
salexigens DSM 2638]
Length = 342
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Query: 23 DLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQAR 82
DLW+PEL G++ + N PREV LK +G N + Q L L R
Sbjct: 148 DLWKPELKGKLLLPNEPREVFALALKLLGYPLNETD-----PAHIEEAYQKLKTLIPSVR 202
Query: 83 LFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAASR 141
+FDS +A G++ V V ++ + A + ++ V P G +LW D IP ++
Sbjct: 203 VFDSDSPKQALLAGEIAVGVVFNGEAFIANQENPDIKYVYPPEGYNLWVDSLCIPKGAK 261
>gi|399008538|ref|ZP_10711009.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM17]
gi|398116267|gb|EJM06035.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM17]
Length = 355
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Query: 18 IEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
I+ W L+ PE ++S ++S E++ +VL YMG NS N D +
Sbjct: 143 IDSWAMLFEPENIKKLSSCGVAFLDSADEMLPAVLNYMGLDPNSQNPD-----DYKKAEA 197
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSG 126
L + F+S+ Y+ G++ VA G+S DV A R + +A V+PK G
Sbjct: 198 KLLAVRPYVTYFNSSKYISDLANGEICVAAGFSGDVFQAKARAAEAGKGIEIAYVIPKEG 257
Query: 127 ASLWADLWAIP 137
+LW D+ AIP
Sbjct: 258 GNLWFDMLAIP 268
>gi|303234048|ref|ZP_07320697.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Finegoldia
magna BVS033A4]
gi|302494973|gb|EFL54730.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Finegoldia
magna BVS033A4]
Length = 341
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 15/174 (8%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNS-NNIDL 61
I Y K+K ++ ++ W LW + I M+NS R+ +G LK +G S NS N+ +L
Sbjct: 131 ILYNKNKVKEK----VDSWNILWDEKYKDNIIMMNSTRDTLGVALKRLGYSMNSRNDAEL 186
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ A + Q++L L A L D T D +AV +S D + + N+ V
Sbjct: 187 EKAKQSLIKQKDLVL----AYLVDETKTQMVNEEAD--LAVMYSGDAIVSKGENENLEYV 240
Query: 122 VPKSGASLWADLWAI--PAASRLETKQIGGRVRGP--SPLIHQWIEFCLQTARA 171
+PK G++LW D AI A ++ ++ + P + L ++I + L + +A
Sbjct: 241 IPKEGSNLWFDTLAILKNAKNKENAEKFINFMTNPENAKLNAEYIGYSLPSTQA 294
>gi|167856022|ref|ZP_02478767.1| hypothetical protein HPS_02738 [Haemophilus parasuis 29755]
gi|167852861|gb|EDS24130.1| hypothetical protein HPS_02738 [Haemophilus parasuis 29755]
Length = 349
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 29/184 (15%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALL 77
I W DLW+PE G++ ++N REV L G S N+ N D ++ + + L L
Sbjct: 149 ITSWGDLWKPEFKGKVLLMNDSREVFHIALLLDGKSPNTTNAD-EIK----TAYERLTKL 203
Query: 78 ANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 137
+F+S + G+V + + W+ A ++ + PK GA +W D + IP
Sbjct: 204 VPNVLVFNSDSPEMPYLQGEVAIGMQWTGSAYRAKSENPDLKFIFPKEGAVIWMDNYVIP 263
Query: 138 AASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEE 197
++ K+ H++I+F L+ P ++ +ET +P E
Sbjct: 264 KNAK--NKEAA----------HKFIDFLLR------------PESAKMVIETMGFSMPNE 299
Query: 198 LLKG 201
+K
Sbjct: 300 NVKA 303
>gi|261418972|ref|YP_003252654.1| extracellular solute-binding protein [Geobacillus sp. Y412MC61]
gi|297531063|ref|YP_003672338.1| family 1 extracellular solute-binding protein [Geobacillus sp.
C56-T3]
gi|319765789|ref|YP_004131290.1| extracellular solute-binding protein [Geobacillus sp. Y412MC52]
gi|261375429|gb|ACX78172.1| extracellular solute-binding protein family 1 [Geobacillus sp.
Y412MC61]
gi|297254315|gb|ADI27761.1| extracellular solute-binding protein family 1 [Geobacillus sp.
C56-T3]
gi|317110655|gb|ADU93147.1| extracellular solute-binding protein family 1 [Geobacillus sp.
Y412MC52]
Length = 357
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 84/184 (45%), Gaps = 26/184 (14%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN-SNNIDLQVAGGKIS-VQQNL- 74
I W DLW P+L +I +V+ REV+G L +G S N +N LQ A K+ + N+
Sbjct: 155 ITSWNDLWNPDLRNQILLVDGAREVMGMALNSLGYSLNDTNKAHLQEAKRKLDRLMPNVK 214
Query: 75 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 134
A++ ++ +L + + + V WS D + + VVPK G++LW D
Sbjct: 215 AIVGDEIKLLLANE--------EAAIGVVWSGDAAEIIAENDKLDYVVPKEGSNLWFDNM 266
Query: 135 AIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKL 194
IP + K I G H +I F L A E + ++P+ + L L
Sbjct: 267 VIPKTA----KNIEG--------AHAFINFMLDPKHAAQ-NAEYVGYSTPN--KKALAYL 311
Query: 195 PEEL 198
P+++
Sbjct: 312 PKDI 315
>gi|398939706|ref|ZP_10668799.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM41(2012)]
gi|398164028|gb|EJM52177.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM41(2012)]
Length = 365
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 15 LAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKI 68
L I+ W ++ PE + ++ ++S E++ +VL YMG + NS N D + A K
Sbjct: 150 LDKIDSWDVVFEPENIKKLHSCGVAFLDSADEMMPTVLNYMGLNANSTNPEDYKKAEAK- 208
Query: 69 SVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVV 122
L + F S+ Y+ GD+ VA+G+S D+ A R + N+A +
Sbjct: 209 -----LLAVRPYVTYFHSSKYIADLANGDICVAIGFSGDMFQAKARAAEAGKGMNIAYSI 263
Query: 123 PKSGASLWADLWAIP 137
PK G +LW D+ AIP
Sbjct: 264 PKEGGALWFDMLAIP 278
>gi|332297247|ref|YP_004439169.1| extracellular solute-binding protein [Treponema brennaborense DSM
12168]
gi|332180350|gb|AEE16038.1| extracellular solute-binding protein family 1 [Treponema
brennaborense DSM 12168]
Length = 345
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 21 WKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNS-NNIDLQVAGGKISVQQNLALLAN 79
W R +L GR+ M++ REVIG L YMG S NS ++ +L A + + L+
Sbjct: 150 WNIFARTDLKGRMCMMDDMREVIGDALAYMGKSVNSLDDAELNAAKELVITEWKPNLVK- 208
Query: 80 QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV--KRMSNVAVVVPKSGASLWADLWAI 136
FD+ + K+F GD WV G++ V V ++ + V +P+ G ++ D I
Sbjct: 209 ----FDAEGFGKSFAAGDFWVVQGYAEVVFGEVPPEKWNTVDFFIPREGGPMYIDSMCI 263
>gi|111226166|ref|YP_716960.1| ABC transporter substrate-binding protein [Frankia alni ACN14a]
gi|111153698|emb|CAJ65456.1| ABC-transporter polyamine-binding lipoprotein [Frankia alni ACN14a]
Length = 424
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 9/136 (6%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGAS-YNSNNIDL 61
IAY ++ + I + DL+ P+ AG++ M +++ L +G S D
Sbjct: 211 IAYDPARTGRE----ITSYNDLFDPKFAGKVGMFGDNQDLPNLALLGIGVDPAKSTPDDW 266
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ A K++ Q+ ++ R + Y+ A GD+W+++ WS DV + +N+ V
Sbjct: 267 KKAAAKLTAQRRDGIV----RKYYDQSYIDALAGGDLWISMAWSGDVYQQIATGTNLKFV 322
Query: 122 VPKSGASLWADLWAIP 137
VP G LW D IP
Sbjct: 323 VPSEGGLLWTDNMCIP 338
>gi|417925726|ref|ZP_12569144.1| ABC transporter, solute-binding protein [Finegoldia magna
SY403409CC001050417]
gi|341590933|gb|EGS34151.1| ABC transporter, solute-binding protein [Finegoldia magna
SY403409CC001050417]
Length = 341
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 15/174 (8%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNS-NNIDL 61
I Y K+K ++ ++ W LW + I M+NS R+ +G LK +G S NS N+ +L
Sbjct: 131 ILYNKNKVKEK----VDSWNILWDEKYKDNIIMMNSTRDTLGVALKRLGYSMNSRNDAEL 186
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+ A + Q++L L A L D T D +AV +S D + + N+ V
Sbjct: 187 EKAKQSLIKQKDLVL----AYLVDETKTQMVNEEAD--LAVMYSGDAIVSKGENENLEYV 240
Query: 122 VPKSGASLWADLWAI--PAASRLETKQIGGRVRGP--SPLIHQWIEFCLQTARA 171
+PK G++LW D AI A ++ ++ + P + L ++I + L + +A
Sbjct: 241 IPKEGSNLWFDTLAILKNAKNKENAEKFINFMTNPENAKLNAEYIGYSLPSTQA 294
>gi|336177004|ref|YP_004582379.1| family 1 extracellular solute-binding protein [Frankia symbiont of
Datisca glomerata]
gi|334857984|gb|AEH08458.1| extracellular solute-binding protein family 1 [Frankia symbiont of
Datisca glomerata]
Length = 462
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 9/136 (6%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGAS-YNSNNIDL 61
IAY ++ + I ++DL+ P AGR+ M R++ L MG + S D
Sbjct: 235 IAYDPNRTGRE----INSFRDLFDPAFAGRVGMFGDARDLPNFTLVGMGITPETSTPADW 290
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
Q A + Q++ ++ R + Y++ GD+W+++ WS D+ A +++ V
Sbjct: 291 QKAAELLRRQRDARIV----RDYYQQDYIEPLKKGDIWLSMAWSGDIFQANSEGADLRFV 346
Query: 122 VPKSGASLWADLWAIP 137
+P G LW D IP
Sbjct: 347 IPAEGGILWTDSMCIP 362
>gi|317495185|ref|ZP_07953555.1| extracellular solute-binding protein [Gemella morbillorum M424]
gi|316914607|gb|EFV36083.1| extracellular solute-binding protein [Gemella morbillorum M424]
Length = 358
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 64/142 (45%), Gaps = 9/142 (6%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN-SNNIDL 61
I Y K+K E W DLW L I +++ RE++G L+ G S N +N ++L
Sbjct: 142 IVYNKTKVPSD--LKFEKWDDLWDARLENNILLIDGAREMMGIALQSEGNSVNDTNEVNL 199
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVV 121
+A ++ L LL + ++ + WV+V +S D + N+
Sbjct: 200 NLA------EKKLELLHKNVKAINADEKKMLMINNEAWVSVVFSGDASAIMTENENMVYS 253
Query: 122 VPKSGASLWADLWAIPAASRLE 143
VPK G +LW D IP S+ E
Sbjct: 254 VPKEGTNLWFDNIVIPKTSKNE 275
>gi|126207852|ref|YP_001053077.1| spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|165975828|ref|YP_001651421.1| spermidine/putrescine-binding periplasmic protein [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|303249730|ref|ZP_07335934.1| spermidine/putrescine-binding periplasmic protein [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|303252611|ref|ZP_07338774.1| spermidine/putrescine-binding periplasmic protein 1 precursor
[Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|307245196|ref|ZP_07527287.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307247366|ref|ZP_07529414.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|307249588|ref|ZP_07531575.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|307251917|ref|ZP_07533818.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307254143|ref|ZP_07535988.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307256412|ref|ZP_07538194.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|307258607|ref|ZP_07540342.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|407692058|ref|YP_006816847.1| spermidine/putrescine-binding periplasmic protein [Actinobacillus
suis H91-0380]
gi|126096644|gb|ABN73472.1| spermidine/putrescine-binding periplasmic protein 1 precursor
[Actinobacillus pleuropneumoniae serovar 5b str. L20]
gi|165875929|gb|ABY68977.1| spermidine/putrescine-binding periplasmic protein [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|302648579|gb|EFL78772.1| spermidine/putrescine-binding periplasmic protein 1 precursor
[Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|302651297|gb|EFL81449.1| spermidine/putrescine-binding periplasmic protein [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306853840|gb|EFM86054.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306856210|gb|EFM88365.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|306858443|gb|EFM90512.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306860609|gb|EFM92621.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306862843|gb|EFM94792.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306865042|gb|EFM96943.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306867264|gb|EFM99117.1| Spermidine/putrescine-binding periplasmic protein 1 [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|407388115|gb|AFU18608.1| spermidine/putrescine-binding periplasmic protein [Actinobacillus
suis H91-0380]
Length = 360
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 79/179 (44%), Gaps = 22/179 (12%)
Query: 21 WKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQ 80
W DLW+PE A ++ +++ REV L +G + N+ N + A + L L
Sbjct: 163 WGDLWKPEFANKVQLLDDAREVFNIALLKLGKNPNTTNPEEIKAA-----YEELRKLRPN 217
Query: 81 ARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAAS 140
F S + +F G+V V W+ V A K + V +V PK G LW D AIPA +
Sbjct: 218 VLSFTSDNPANSFIAGEVSVGQLWNGSVRIAKKEQAPVNMVFPKEGPVLWVDTLAIPANA 277
Query: 141 RLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEV-IPGASPSALETTLVKLPEEL 198
+ + H+ I + L A E+ P ++ AL+T LP+E+
Sbjct: 278 KNKEN------------AHKLINYLLSAPVAEKLTLEIGYPTSNVEALKT----LPKEI 320
>gi|423203722|ref|ZP_17190290.1| hypothetical protein HMPREF1167_03873 [Aeromonas veronii AER39]
gi|404612500|gb|EKB09561.1| hypothetical protein HMPREF1167_03873 [Aeromonas veronii AER39]
Length = 361
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%), Gaps = 22/178 (12%)
Query: 18 IEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
I+ W ++ PE ++S ++S E+I + L Y+G NS+ A G I +
Sbjct: 149 IDSWATIFEPENMAKLSRCGVAFLDSADEMIPAALNYLGLDPNSH------ATGDIKQAE 202
Query: 73 NLALLAN-QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKS 125
L L F S+ Y+ GD+ VA G+S D+L A R +A +PK
Sbjct: 203 ALLLKVRPYVAYFHSSKYIGDLANGDICVAAGFSGDILQAAARADEAGKGVKIAYSIPKE 262
Query: 126 GASLWADLWAIP--AASRLETKQIGGRVRGPSPL--IHQWIEFCLQTARALPFKQEVI 179
G +LW D+ AIP A + E + V P + + ++ + +RA F E +
Sbjct: 263 GGNLWFDMMAIPSDATNVKEAHALINYVLQPEVIAKVSDYVGYANPNSRAGEFMDEAV 320
>gi|398838150|ref|ZP_10595432.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM102]
gi|398116712|gb|EJM06470.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM102]
Length = 365
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 95/218 (43%), Gaps = 32/218 (14%)
Query: 3 IAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYN 55
I Y +K ++ AP+ W L++PE A + IS ++SP E++ + L Y+G N
Sbjct: 136 IGYNPAKVKEVLGTNAPVNSWDLLFKPENAAKLKACGISFLDSPTEMLPAALHYLGYPVN 195
Query: 56 SNNIDLQVAGGKISVQQNLALLAN---QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 112
S + K + + AL F S+ Y+ G++ VAVG+S DVL A
Sbjct: 196 SQD--------KAQIAEAEALFMKIRPSVAYFHSSKYISDLANGNICVAVGYSGDVLQAK 247
Query: 113 KRMSN------VAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPL--IHQWI 162
R + +PK GA + D+ AIP AA+ + P + + +
Sbjct: 248 ARAKEAGDKVKIEYSIPKEGAGSFYDMVAIPRDAANVDNAYLFMNFLMRPDIIAEVTNSV 307
Query: 163 EFCLQTARALPFKQEVI---PGAS-PSALETTLVKLPE 196
+ A A P E I PG+ P A+ TL +P+
Sbjct: 308 GYSNANAAATPLVDEAIRDDPGSYPPQAVMATLYAIPD 345
>gi|312863574|ref|ZP_07723812.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Streptococcus vestibularis F0396]
gi|311101110|gb|EFQ59315.1| putative spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Streptococcus vestibularis F0396]
Length = 355
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 93/196 (47%), Gaps = 31/196 (15%)
Query: 19 EDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKI-SVQQNL-A 75
+ W DLW PE +I +V+ REVIG L +G S N+ N+ +L++A K+ S+ N+ A
Sbjct: 154 QHWNDLWSPEYRNQIMLVDGAREVIGLSLNSLGYSLNTKNMTELRLAETKLNSLTPNIKA 213
Query: 76 LLANQARLFDSTHYLKAFGI-GDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 134
++ ++ +K + I GD + V +S + + + ++ VVP G++LW D
Sbjct: 214 IVGDE---------MKGYMIQGDAAIGVTFSGEASEMLDKNEDLRYVVPSEGSNLWFDNL 264
Query: 135 AIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKL 194
IP + E + + +I F L+ A E I A+P+ L L
Sbjct: 265 VIPKTVKHEKEA------------YAFINFMLKPENAAQ-NAEYIGYATPNEAAKAL--L 309
Query: 195 PEELLKGK---PSQDT 207
P+ + K PS+ T
Sbjct: 310 PKSITDDKAFYPSEST 325
>gi|343519595|ref|ZP_08756575.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
pittmaniae HK 85]
gi|343392665|gb|EGV05230.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
pittmaniae HK 85]
Length = 361
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 8/139 (5%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IA+ + ++ + W DLW+PE A ++ +++ REV L +G N+ + +
Sbjct: 149 IAFNTNTYKGSDFTA---WGDLWKPEFANKVQLLDDAREVFNIALLKLGQDPNTKDPAII 205
Query: 63 VAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVV 122
K + ++ L L N F+S + AF G+V V W+ V A K + + +V
Sbjct: 206 ----KQAYEELLKLRPN-VLAFNSDNPANAFISGEVEVGQLWNGSVRIAKKEQAPLDMVF 260
Query: 123 PKSGASLWADLWAIPAASR 141
PK G LW D AIP+ S+
Sbjct: 261 PKEGPVLWVDTLAIPSTSK 279
>gi|330827832|ref|YP_004390784.1| spermidine/putrescine ABC transporter substrate-binding protein
[Aeromonas veronii B565]
gi|423211496|ref|ZP_17198029.1| hypothetical protein HMPREF1169_03547 [Aeromonas veronii AER397]
gi|328802968|gb|AEB48167.1| Spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein [Aeromonas veronii
B565]
gi|404613576|gb|EKB10597.1| hypothetical protein HMPREF1169_03547 [Aeromonas veronii AER397]
Length = 361
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%), Gaps = 22/178 (12%)
Query: 18 IEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
I+ W ++ PE ++S ++S E+I + L Y+G NS+ A G I +
Sbjct: 149 IDSWATIFEPENMAKLSRCGVAFLDSADEMIPAALNYLGLDPNSH------ATGDIKQAE 202
Query: 73 NLALLAN-QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKS 125
L L F S+ Y+ GD+ VA G+S D+L A R +A +PK
Sbjct: 203 ALLLKVRPYVAYFHSSKYIGDLANGDICVAAGFSGDILQAAARADEAGKGVKIAYSIPKE 262
Query: 126 GASLWADLWAIP--AASRLETKQIGGRVRGPSPL--IHQWIEFCLQTARALPFKQEVI 179
G +LW D+ AIP A + E + V P + + ++ + +RA F E +
Sbjct: 263 GGNLWFDMMAIPSDATNVKEAHALINYVLQPEVIAKVSDYVGYANPNSRAGEFMDEAV 320
>gi|422697722|ref|ZP_16755654.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX1346]
gi|315173742|gb|EFU17759.1| putative spermidine/putrescine-binding periplasmic protein PotD
[Enterococcus faecalis TX1346]
Length = 357
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 68/127 (53%), Gaps = 11/127 (8%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNS-NNIDLQVAGGKISVQQN--L 74
I+ W DLWRPEL + +++ REV+G L +G S NS N+ L+ A K++ N
Sbjct: 155 IKHWDDLWRPELKNNVMLIDGAREVLGLSLNSLGYSLNSKNDQQLRQATDKLNRLTNNVK 214
Query: 75 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 134
A++A++ +++ + + VAV +S + ++ ++ V+P G++LW D
Sbjct: 215 AIVADEIKMYMANE--------ESAVAVTFSGEAAEMLENNEHLHYVIPSEGSNLWFDNI 266
Query: 135 AIPAASR 141
+P ++
Sbjct: 267 VMPKTAK 273
>gi|406674913|ref|ZP_11082105.1| hypothetical protein HMPREF1170_00313 [Aeromonas veronii AMC35]
gi|404628421|gb|EKB25203.1| hypothetical protein HMPREF1170_00313 [Aeromonas veronii AMC35]
Length = 361
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%), Gaps = 22/178 (12%)
Query: 18 IEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
I+ W ++ PE ++S ++S E+I + L Y+G NS+ A G I +
Sbjct: 149 IDSWATIFEPENMAKLSRCGVAFLDSADEMIPAALNYLGLDPNSH------ATGDIKQAE 202
Query: 73 NLALLAN-QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKS 125
L L F S+ Y+ GD+ VA G+S D+L A R +A +PK
Sbjct: 203 ALLLKVRPYVAYFHSSKYIGDLANGDICVAAGFSGDILQAAARADEAGKGVKIAYSIPKE 262
Query: 126 GASLWADLWAIP--AASRLETKQIGGRVRGPSPL--IHQWIEFCLQTARALPFKQEVI 179
G +LW D+ AIP A + E + V P + + ++ + +RA F E +
Sbjct: 263 GGNLWFDMMAIPSDATNVKEAHALINYVLQPEVIAKVSDYVGYANPNSRAGEFMDEAV 320
>gi|240949766|ref|ZP_04754098.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Actinobacillus minor NM305]
gi|240295798|gb|EER46485.1| spermidine/putrescine-binding periplasmic protein (SPBP)
[Actinobacillus minor NM305]
Length = 359
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 31/203 (15%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALL 77
+ W DLWR E G++ ++N REV L G S NS N + ++ S + L L
Sbjct: 158 LSSWGDLWREEYKGKLLLMNDSREVFHIALLLDGKSPNSEN-EQEIK----SAYERLKKL 212
Query: 78 ANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 137
+F+S + G+V V + WS A ++ + PK GA LW D + IP
Sbjct: 213 IPNVLVFNSDSPEMPYLQGEVSVGMQWSGSAYRAKNENKDLQFIFPKEGAVLWMDNYVIP 272
Query: 138 AASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEE 197
G V + H++I+F L+ P ++ +ET +P E
Sbjct: 273 K----------GAVNKEAA--HKFIDFLLR------------PESAKEVIETMGFSMPNE 308
Query: 198 LLKG-KPSQDTNLIVGVPP-AEI 218
+K P++ N + PP AEI
Sbjct: 309 GVKALLPAETVNDPLIFPPKAEI 331
>gi|398995885|ref|ZP_10698753.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM21]
gi|398128443|gb|EJM17832.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM21]
Length = 365
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 91/201 (45%), Gaps = 26/201 (12%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP W L++PE A + IS ++SP E++ + L Y+G NS + G+I+
Sbjct: 151 APTNSWDLLFKPENAEKLKACGISFLDSPTEMLPAALHYLGYPVNSQD------KGQIAE 204
Query: 71 QQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVP 123
+ L + + F S+ Y+ G++ VAVG+S DVL A R + +P
Sbjct: 205 AEALFMKIRPSVAYFHSSKYISDLANGNICVAVGYSGDVLQAKARAQESGNSVQIDYSIP 264
Query: 124 KSGASLWADLWAIP--AASRLETKQIGGRVRGPSPL--IHQWIEFCLQTARALPFKQEVI 179
K GA + D+ AIP AA+ + P + I I + A A P E I
Sbjct: 265 KEGAGSFYDMVAIPRDAANVENAYLFMNFLMRPDIIAEITNNIGYSNANAAATPLVDEAI 324
Query: 180 ---PGASPSA-LETTLVKLPE 196
PG+ PS + TL +P+
Sbjct: 325 RDDPGSYPSQDVMATLYAIPD 345
>gi|422642389|ref|ZP_16705807.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae Cit 7]
gi|440745316|ref|ZP_20924611.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas syringae BRIP39023]
gi|330954771|gb|EGH55031.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas syringae Cit 7]
gi|440372683|gb|ELQ09469.1| spermidine/putrescine ABC transporter substrate-binding protein
[Pseudomonas syringae BRIP39023]
Length = 364
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 64/136 (47%), Gaps = 18/136 (13%)
Query: 18 IEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSN-NIDLQVAGGKISVQ 71
I+ W L+ PE ++S ++S E++ +VL YMG NS D + A K
Sbjct: 152 IDSWAVLFEPENIKKLSSCGVAFLDSADEMLPAVLNYMGLDPNSTKEADYKKAEAK---- 207
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKS 125
L + F S+ Y+ GD+ VA G+S DV A R +A +PK
Sbjct: 208 --LLAIRPYVTYFHSSKYITDLANGDICVAAGFSGDVFQAKSRAEEAGKGVKIAYSIPKE 265
Query: 126 GASLWADLWAIPAASR 141
G +LW D+ AIPA S+
Sbjct: 266 GGNLWFDMLAIPADSK 281
>gi|417858952|ref|ZP_12504009.1| ABC transporter, substrate binding protein (putrescine)
[Agrobacterium tumefaciens F2]
gi|338824956|gb|EGP58923.1| ABC transporter, substrate binding protein (putrescine)
[Agrobacterium tumefaciens F2]
Length = 365
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 16/136 (11%)
Query: 17 PIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQ 71
P++ W L++PE A + I+++++ E + Y+G + +S AGG++
Sbjct: 152 PVDSWDILFKPENAEKLKSCGINILDASDETFAIAMNYLGKNPDSKETADLEAGGEV--- 208
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
+ + + F+S+ Y+ GD + +GWS D+L A R V V+PK
Sbjct: 209 --YSKIRPFVKTFNSSAYIDELANGDSCITIGWSGDILQAKSRAEEAKNGVEVNYVIPKE 266
Query: 126 GASLWADLWAIPAASR 141
G +W D AIPA ++
Sbjct: 267 GTYMWFDNLAIPADAK 282
>gi|83941880|ref|ZP_00954342.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Sulfitobacter sp. EE-36]
gi|83847700|gb|EAP85575.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Sulfitobacter sp. EE-36]
Length = 361
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 16/134 (11%)
Query: 16 APIEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ +++PE +++ +++P E+I + LK++G S + D+ +
Sbjct: 147 APVDSLDLVFKPENMEKLAECGVHFLDAPTEMIPAALKFLGEDPQSQDPDVIAKAEPV-- 204
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
L +A + F S+ Y+ A GD+ VA GWS D+L + R + +A PK
Sbjct: 205 ---LTAVAPHVQKFHSSEYINALANGDICVAFGWSGDILQSRDRAAEADNGVEIAYYAPK 261
Query: 125 SGASLWADLWAIPA 138
GA +W D AIPA
Sbjct: 262 EGALMWFDNMAIPA 275
>gi|68249097|ref|YP_248209.1| spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
influenzae 86-028NP]
gi|260582237|ref|ZP_05850030.1| spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
influenzae NT127]
gi|68057296|gb|AAX87549.1| spermidine/putrescine-binding periplasmic protein 2 precursor
[Haemophilus influenzae 86-028NP]
gi|260094605|gb|EEW78500.1| spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
influenzae NT127]
Length = 350
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 19/155 (12%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLAL 76
I W DLW+PE G++ M + REV L G S N+ N D++ A ++ L
Sbjct: 151 ITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIKTAYERLE-----KL 205
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
L N A F+S + G+V + + W+ A K ++ V PK GA W D +AI
Sbjct: 206 LPNVAT-FNSDSPEVPYVQGEVAIGMIWNGSAYLAQKENQSLQFVYPKEGAIFWMDNYAI 264
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA 171
P +++ V G +++I+F L+ A
Sbjct: 265 PNSAQ--------NVEGA----YKFIDFLLRPENA 287
>gi|209885624|ref|YP_002289481.1| putrescine-binding periplasmic protein [Oligotropha carboxidovorans
OM5]
gi|337740782|ref|YP_004632510.1| putrescine-binding periplasmic protein PotF [Oligotropha
carboxidovorans OM5]
gi|386029799|ref|YP_005950574.1| putrescine-binding periplasmic protein PotF [Oligotropha
carboxidovorans OM4]
gi|209873820|gb|ACI93616.1| putrescine-binding periplasmic protein [Oligotropha carboxidovorans
OM5]
gi|336094867|gb|AEI02693.1| putrescine-binding periplasmic protein PotF [Oligotropha
carboxidovorans OM4]
gi|336098446|gb|AEI06269.1| putrescine-binding periplasmic protein PotF [Oligotropha
carboxidovorans OM5]
Length = 368
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 70/138 (50%), Gaps = 18/138 (13%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKIS 69
A I+ W ++ PE + I M++S +++ + L ++G NS DL+ AG
Sbjct: 154 AAIDSWDTIFNPEKIAKFKDCGIHMLDSADDILPAALNWLGLDPNSTRREDLEKAG---- 209
Query: 70 VQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVP 123
+ L + R F S+ YL A G++ +AVGWS D+ A KR + +A +P
Sbjct: 210 --EALQKIRPFIRKFHSSEYLSALATGEICLAVGWSGDIKQAQKRAAESKNGVEIAYAIP 267
Query: 124 KSGASLWADLWAIPAASR 141
K GA ++ D AIP+ ++
Sbjct: 268 KEGAQMFFDNLAIPSDAK 285
>gi|392987511|ref|YP_006486104.1| spermidine/putrescine ABC transporter substrate-binding protein
[Enterococcus hirae ATCC 9790]
gi|392334931|gb|AFM69213.1| spermidine/putrescine ABC transporter spermidine/putrescine-binding
protein [Enterococcus hirae ATCC 9790]
Length = 359
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 107/245 (43%), Gaps = 37/245 (15%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNID-L 61
I Y F K I+ W DLW+P+L + +++ REV+G L +G S NS +D L
Sbjct: 143 IVYNDKVFNKE---EIQHWNDLWKPKLRDSLMLIDGAREVMGLSLNSLGYSLNSKEMDQL 199
Query: 62 QVAGGKIS-VQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVA 119
A K++ + N+ A++A++ +++ + VAV +S + + ++
Sbjct: 200 NAAADKLNKLTPNVKAIVADEIKMYMINE--------EASVAVTFSGEAADMMSENEHLH 251
Query: 120 VVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVI 179
V+P G++LW D +P ++ + G + +I F L+ A E I
Sbjct: 252 YVIPSEGSNLWFDNIVMPKTAK---NKEGA---------YDFINFMLKPENAAQ-NAEYI 298
Query: 180 PGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
++P+ L LP+E+ SQD P E ++ E E L L Y L
Sbjct: 299 GYSTPNKKAKAL--LPKEI-----SQDEQF---YPSDETISHLEVYEDLGPKFLGIYNDL 348
Query: 240 VADLQ 244
+ +
Sbjct: 349 FLEFK 353
>gi|149913022|ref|ZP_01901556.1| hypothetical protein RAZWK3B_03500 [Roseobacter sp. AzwK-3b]
gi|149813428|gb|EDM73254.1| hypothetical protein RAZWK3B_03500 [Roseobacter sp. AzwK-3b]
Length = 361
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 68/133 (51%), Gaps = 16/133 (12%)
Query: 16 APIEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W ++ PE +++ +++P E+I + L Y+G +S++ D+ V
Sbjct: 147 APMNSWALVFEPENMEKLAECGVHFLDAPAEMIPAALNYIGEDPDSHDPDVIA-----KV 201
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM----SNVAVV--VPK 124
++ + + F S+ Y+ A GD+ VAVGWS D+L A R + V ++ PK
Sbjct: 202 EEVYMGIRPHIQKFHSSEYINALANGDICVAVGWSGDILQARDRAAEADNGVEIIYNAPK 261
Query: 125 SGASLWADLWAIP 137
GA +W D AIP
Sbjct: 262 EGAQMWFDQMAIP 274
>gi|387121804|ref|YP_006287687.1| spermidine/putrescine-binding periplasmic protein 1
[Aggregatibacter actinomycetemcomitans D7S-1]
gi|385876296|gb|AFI87855.1| spermidine/putrescine-binding periplasmic protein 1 precursor
[Aggregatibacter actinomycetemcomitans D7S-1]
Length = 393
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 84/191 (43%), Gaps = 15/191 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IA+ + ++ + W DLW+PE A ++ +++ REV L +G N+ +
Sbjct: 181 IAFNTNTYKGSDFT---SWGDLWKPEFANKVQLLDDAREVFNIALLKIGQDPNTQD---- 233
Query: 63 VAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVV 122
A K + ++ L L N F+S + +F G+V V W+ V A K + + +V
Sbjct: 234 PAIIKQAYEELLKLRPN-VLSFNSDNPANSFISGEVEVGQLWNGSVRIAKKEQAPLDMVF 292
Query: 123 PKSGASLWADLWAIP-------AASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFK 175
PK G LW D AIP A +L +G + L + L+ +ALP +
Sbjct: 293 PKEGPVLWVDTLAIPVTSKNPDGAHKLINYMLGAKAAEKLTLAIGYPTANLEAKKALPKE 352
Query: 176 QEVIPGASPSA 186
P PSA
Sbjct: 353 ITEDPAIYPSA 363
>gi|302189523|ref|ZP_07266196.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas syringae pv. syringae 642]
Length = 364
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 64/136 (47%), Gaps = 18/136 (13%)
Query: 18 IEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSN-NIDLQVAGGKISVQ 71
I+ W L+ PE ++S ++S E++ +VL YMG NS D + A K
Sbjct: 152 IDSWAVLFEPENIKKLSSCGVAFLDSADEMLPAVLNYMGLDPNSTKEADYKKAEAK---- 207
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKS 125
L + F S+ Y+ GD+ VA G+S DV A R +A +PK
Sbjct: 208 --LLAIRPYVTYFHSSKYITDLANGDICVAAGFSGDVFQAKSRAEEAGKGVKIAYSIPKE 265
Query: 126 GASLWADLWAIPAASR 141
G +LW D+ AIPA S+
Sbjct: 266 GGNLWFDMLAIPADSK 281
>gi|407976320|ref|ZP_11157220.1| extracellular solute-binding protein family 1 [Nitratireductor
indicus C115]
gi|407428218|gb|EKF40902.1| extracellular solute-binding protein family 1 [Nitratireductor
indicus C115]
Length = 365
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 65/133 (48%), Gaps = 18/133 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQ 71
I+ W L++PELA + I M++S EVI + L Y G N+ + DL A +
Sbjct: 153 IDTWDVLFKPELAAKFKDCGIHMLDSASEVIRAALIYQGLDPNTPSAEDLAKA------E 206
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
L + R F S+ Y+ GDV +A+G+S D+ A R + V +PK
Sbjct: 207 ALLVAVRPYVRKFHSSEYINGLANGDVCLALGYSGDIFQARDRAAEADQGVEVGYSIPKE 266
Query: 126 GASLWADLWAIPA 138
GA LW D AIPA
Sbjct: 267 GALLWFDQMAIPA 279
>gi|386265113|ref|YP_005828605.1| Spermidine/putrescine ABC transporter, periplasmic-binding protein
[Haemophilus influenzae R2846]
gi|309972349|gb|ADO95550.1| Spermidine/putrescine ABC transporter, periplasmic-binding protein
[Haemophilus influenzae R2846]
Length = 350
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 19/155 (12%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLAL 76
I W DLW+PE G++ M + REV L G S N+ N D++ A ++ L
Sbjct: 151 ITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIKTAYERLE-----KL 205
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
L N F+S + G+ + + W+ A K ++ V PK GA W D +AI
Sbjct: 206 LPNVVT-FNSDSPEVPYVQGEATIGMIWNGSAYLAQKENPSLQFVYPKEGAIFWMDNYAI 264
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARA 171
P++++ V G H++I+F L+ A
Sbjct: 265 PSSAK--------NVEGA----HKFIDFLLRPENA 287
>gi|416070630|ref|ZP_11583661.1| spermidine/putrescine-binding periplasmic protein 1 precursor
[Aggregatibacter actinomycetemcomitans serotype f str.
D18P1]
gi|347998970|gb|EGY39854.1| spermidine/putrescine-binding periplasmic protein 1 precursor
[Aggregatibacter actinomycetemcomitans serotype f str.
D18P1]
Length = 393
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 84/191 (43%), Gaps = 15/191 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IA+ + ++ + W DLW+PE A ++ +++ REV L +G N+ +
Sbjct: 181 IAFNTNTYKGSDFT---SWGDLWKPEFANKVQLLDDAREVFNIALLKIGQDPNTQD---- 233
Query: 63 VAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVV 122
A K + ++ L L N F+S + +F G+V V W+ V A K + + +V
Sbjct: 234 PAIIKQAYEELLKLRPN-VLSFNSDNPANSFISGEVEVGQLWNGSVRIAKKEQAPLDMVF 292
Query: 123 PKSGASLWADLWAIP-------AASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFK 175
PK G LW D AIP A +L +G + L + L+ +ALP +
Sbjct: 293 PKEGPVLWVDTLAIPVTSKNPDGAHKLINYMLGAKAAEKLTLAIGYPTANLEAKKALPKE 352
Query: 176 QEVIPGASPSA 186
P PSA
Sbjct: 353 ITEDPAIYPSA 363
>gi|429734884|ref|ZP_19268883.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Aggregatibacter actinomycetemcomitans Y4]
gi|444333997|ref|ZP_21149643.1| spermidine/putrescine-binding periplasmic protein [Aggregatibacter
actinomycetemcomitans serotype a str. A160]
gi|429150939|gb|EKX93829.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD
[Aggregatibacter actinomycetemcomitans Y4]
gi|443551003|gb|ELT59061.1| spermidine/putrescine-binding periplasmic protein [Aggregatibacter
actinomycetemcomitans serotype a str. A160]
Length = 380
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 84/191 (43%), Gaps = 15/191 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IA+ + ++ + W DLW+PE A ++ +++ REV L +G N+ +
Sbjct: 168 IAFNTNTYKGSDFT---SWGDLWKPEFANKVQLLDDAREVFNIALLKIGQDPNTQD---- 220
Query: 63 VAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVV 122
A K + ++ L L N F+S + +F G+V V W+ V A K + + +V
Sbjct: 221 PAIIKQAYEELLKLRPN-VLSFNSDNPANSFISGEVEVGQLWNGSVRIAKKEQAPLDMVF 279
Query: 123 PKSGASLWADLWAIP-------AASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFK 175
PK G LW D AIP A +L +G + L + L+ +ALP +
Sbjct: 280 PKEGPVLWVDTLAIPVTSKNPDGAHKLINYMLGAKAAEKLTLAIGYPTANLEAKKALPKE 339
Query: 176 QEVIPGASPSA 186
P PSA
Sbjct: 340 ITEDPAIYPSA 350
>gi|312112389|ref|YP_003990705.1| family 1 extracellular solute-binding protein [Geobacillus sp.
Y4.1MC1]
gi|336236840|ref|YP_004589456.1| family 1 extracellular solute-binding protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|311217490|gb|ADP76094.1| extracellular solute-binding protein family 1 [Geobacillus sp.
Y4.1MC1]
gi|335363695|gb|AEH49375.1| extracellular solute-binding protein family 1 [Geobacillus
thermoglucosidasius C56-YS93]
Length = 357
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 95/225 (42%), Gaps = 34/225 (15%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN-SNNIDLQVAGGKIS-VQQNL- 74
I W DLW +L +I +V+ REVIG L + S N +N LQ A K+ + N+
Sbjct: 155 ITSWNDLWDKDLRNQILLVDGAREVIGMGLNSLHYSLNDTNKKHLQEAKEKLDRLTPNVK 214
Query: 75 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 134
A++ ++ ++ + + V WS D + + VVPK G++LW D
Sbjct: 215 AIVGDEIKMLLVNE--------EAAIGVVWSGDAAEIIAENDKLDYVVPKEGSNLWFDNM 266
Query: 135 AIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKL 194
IP + K I G HQ+I F L A E + ++P+ E L L
Sbjct: 267 VIPKTA----KNIEGA--------HQFINFMLDPKNAAQ-NAEYVGYSTPN--EKALDYL 311
Query: 195 PEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
P+E+ + K P E + E E L + L+ Y L
Sbjct: 312 PKEVTEDKRF--------YPDFESVGNLEVYENLGKRMLAYYNEL 348
>gi|383777608|ref|YP_005462174.1| putative ABC transporter substrate-binding protein [Actinoplanes
missouriensis 431]
gi|381370840|dbj|BAL87658.1| putative ABC transporter substrate-binding protein [Actinoplanes
missouriensis 431]
Length = 416
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 10/137 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGAS-YNSNNIDL 61
IAY SK + PI DLW P G++ M++ E+ + G S+
Sbjct: 187 IAYDPSKVDR----PITKLADLWDPAFKGKVGMMSDLTELANFGMLAAGVKPGESDEAGW 242
Query: 62 QVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPA-VKRMSNVAV 120
+ K+ Q++ ++ R + Y+ A G G+VW+ WS D+ + +N+
Sbjct: 243 KKGAAKLKQQKDAGIV----RQYYEQDYVDALGNGEVWITQAWSGDIFQKNLSDGTNLKF 298
Query: 121 VVPKSGASLWADLWAIP 137
V+P+ G ++W D +AIP
Sbjct: 299 VIPEEGGTIWTDNFAIP 315
>gi|335357864|ref|ZP_08549734.1| spermidine/putrescine-binding protein [Lactobacillus animalis KCTC
3501]
Length = 357
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 93/225 (41%), Gaps = 30/225 (13%)
Query: 21 WKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNS-NNIDLQVAGGKISVQQNLALLAN 79
W DLW P+L +I ++ RE +G L MG S NS N+ DL A K L L
Sbjct: 158 WNDLWDPQLKNKIMFIDGAREFMGIGLASMGRSLNSKNDADLDRAYNK------LKALTP 211
Query: 80 QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIPAA 139
A+ S + VAV +S + +++ S++ V+P+ G +LW D IP
Sbjct: 212 NAKAIVSDEIKTYMANEESSVAVTFSGEAADMMEKNSHLHYVIPEGGTNLWFDNLVIPKT 271
Query: 140 SRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEELL 199
++ KQ +++I F L A E I ++P+ + L LP+ +
Sbjct: 272 AK--NKQGA----------YEFINFMLDPKNAAQ-NTEYIGYSTPN--KAALKYLPKAIT 316
Query: 200 KGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWLVADLQ 244
K P A + + E E L L Y L +L+
Sbjct: 317 SNKEF--------YPSAARIKQMEIYEDLGPKYLEKYNDLFLELK 353
>gi|423721323|ref|ZP_17695505.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Geobacillus thermoglucosidans TNO-09.020]
gi|383365694|gb|EID42987.1| spermidine/putrescine ABC transporter, substrate-binding protein
[Geobacillus thermoglucosidans TNO-09.020]
Length = 357
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 95/225 (42%), Gaps = 34/225 (15%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN-SNNIDLQVAGGKIS-VQQNL- 74
I W DLW +L +I +V+ REVIG L + S N +N LQ A K+ + N+
Sbjct: 155 ITSWNDLWDKDLRNQILLVDGAREVIGMGLNSLHYSLNDTNKKHLQEAKEKLDRLTPNVK 214
Query: 75 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLW 134
A++ ++ ++ + + V WS D + + VVPK G++LW D
Sbjct: 215 AIVGDEIKMLLVNE--------EAAIGVVWSGDAAEIIAENDKLDYVVPKEGSNLWFDNM 266
Query: 135 AIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKL 194
IP + K I G HQ+I F L A E + ++P+ E L L
Sbjct: 267 VIPKTA----KNIEGA--------HQFINFMLDPKNAAQ-NAEYVGYSTPN--EKALDYL 311
Query: 195 PEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
P+E+ + K P E + E E L + L+ Y L
Sbjct: 312 PKEVTEDKRF--------YPDFESVGNLEVYENLGKRMLAYYNEL 348
>gi|332687056|ref|YP_004456830.1| ABC transporter periplasmic spermidine/putrescine-binding protein
PotD [Melissococcus plutonius ATCC 35311]
gi|379727040|ref|YP_005319225.1| ABC transporter periplasmic spermidine/putrescine-binding protein
PotD [Melissococcus plutonius DAT561]
gi|332371065|dbj|BAK22021.1| ABC transporter, periplasmic spermidineputrescine-binding protein
PotD (TC 3.A.1.11.1) [Melissococcus plutonius ATCC
35311]
gi|376317943|dbj|BAL61730.1| ABC transporter periplasmic spermidine/putrescine-binding protein
PotD [Melissococcus plutonius DAT561]
Length = 357
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 73/142 (51%), Gaps = 14/142 (9%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNS-NNIDL 61
I Y K N+ + W DLWRPEL + +++ REV+G L +G S NS NN L
Sbjct: 143 IIYNDKFIEKSNM---QHWDDLWRPELKNNLMLIDGAREVLGFSLNSLGYSLNSKNNEQL 199
Query: 62 QVAGGKIS-VQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVA 119
+ A K++ + N+ A++A++ +++ + VAV +S + +++ ++
Sbjct: 200 KEAAHKLNHLTSNVKAIVADEIKMYMINE--------ESAVAVTFSGEAAEMLEQNKHLH 251
Query: 120 VVVPKSGASLWADLWAIPAASR 141
V+P G++LW D IP +
Sbjct: 252 YVIPSEGSNLWFDNIVIPKTVK 273
>gi|423016646|ref|ZP_17007367.1| putrescine-binding periplasmic protein [Achromobacter xylosoxidans
AXX-A]
gi|338780315|gb|EGP44727.1| putrescine-binding periplasmic protein [Achromobacter xylosoxidans
AXX-A]
Length = 361
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 62/129 (48%), Gaps = 16/129 (12%)
Query: 20 DWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNL 74
+W +++PE A + ISM++ +V +VLKY+G NS N D A + L
Sbjct: 151 NWDMIFKPENAAKLKECGISMLDEAAQVFPAVLKYLGKDPNSANPDDYKAALDV-----L 205
Query: 75 ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKSGAS 128
+ R F S+ Y+ +GD+ + G+S DV+ A KR V +PK GA
Sbjct: 206 KQIRPYIRQFSSSGYIDELAVGDLCMVYGFSGDVMIARKRAQEAKKAYEVNYFIPKGGAP 265
Query: 129 LWADLWAIP 137
W DL IP
Sbjct: 266 AWFDLMVIP 274
>gi|416033238|ref|ZP_11573007.1| ABC transporter ATPase component [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
gi|416043467|ref|ZP_11574567.1| ABC transporter ATPase component [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
gi|416060515|ref|ZP_11580897.1| ABC transporter ATPase component [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|347997183|gb|EGY38210.1| ABC transporter ATPase component [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
gi|347998330|gb|EGY39261.1| ABC transporter ATPase component [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|347999186|gb|EGY40039.1| ABC transporter ATPase component [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
Length = 365
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 84/191 (43%), Gaps = 15/191 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IA+ + ++ + W DLW+PE A ++ +++ REV L +G N+ +
Sbjct: 153 IAFNTNTYKGSDFT---SWGDLWKPEFANKVQLLDDAREVFNIALLKIGQDPNTQD---- 205
Query: 63 VAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVV 122
A K + ++ L L N F+S + +F G+V V W+ V A K + + +V
Sbjct: 206 PAIIKQAYEELLKLRPN-VLSFNSDNPANSFISGEVEVGQLWNGSVRIAKKEQAPLDMVF 264
Query: 123 PKSGASLWADLWAIP-------AASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFK 175
PK G LW D AIP A +L +G + L + L+ +ALP +
Sbjct: 265 PKEGPVLWVDTLAIPVTSKNPDGAHKLINYMLGAKAAEKLTLAIGYPTANLEAKKALPKE 324
Query: 176 QEVIPGASPSA 186
P PSA
Sbjct: 325 ITEDPAIYPSA 335
>gi|416052375|ref|ZP_11578250.1| spermidine/putrescine-binding periplasmic protein 1 precursor
[Aggregatibacter actinomycetemcomitans serotype e str.
SC1083]
gi|347992104|gb|EGY33529.1| spermidine/putrescine-binding periplasmic protein 1 precursor
[Aggregatibacter actinomycetemcomitans serotype e str.
SC1083]
Length = 393
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 84/191 (43%), Gaps = 15/191 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IA+ + ++ + W DLW+PE A ++ +++ REV L +G N+ +
Sbjct: 181 IAFNTNTYKGSDFT---SWGDLWKPEFANKVQLLDDAREVFNIALLKIGQDPNTQD---- 233
Query: 63 VAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVV 122
A K + ++ L L N F+S + +F G+V V W+ V A K + + +V
Sbjct: 234 PAIIKQAYEELLKLRPN-VLSFNSDNPANSFISGEVEVGQLWNGSVRIAKKEQAPLDMVF 292
Query: 123 PKSGASLWADLWAIP-------AASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFK 175
PK G LW D AIP A +L +G + L + L+ +ALP +
Sbjct: 293 PKEGPVLWVDTLAIPVTSKNPDGAHKLINYMLGAKAAEKLTLAIGYPTANLEAKKALPKE 352
Query: 176 QEVIPGASPSA 186
P PSA
Sbjct: 353 ITEDPAIYPSA 363
>gi|167036227|ref|YP_001671458.1| extracellular solute-binding protein [Pseudomonas putida GB-1]
gi|166862715|gb|ABZ01123.1| extracellular solute-binding protein family 1 [Pseudomonas putida
GB-1]
Length = 364
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 16/135 (11%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
I+ W L+ PE + ++ ++S E++ +VL YMG NS + +Q
Sbjct: 152 IDSWAVLFEPENMKKLAKCGVAFLDSADEMLPAVLNYMGLDPNSTD-----PKDYAKAEQ 206
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPA------VKRMSNVAVVVPKSG 126
L + F S+ Y+ GD+ VA G+S DV A K+ N+A +PK G
Sbjct: 207 KLLAVRPYVTYFHSSKYITDLANGDICVAAGFSGDVFQAKARAEEAKKGVNLAYAIPKEG 266
Query: 127 ASLWADLWAIPAASR 141
+LW D+ AIP ++
Sbjct: 267 GNLWFDVLAIPKDAK 281
>gi|418465922|ref|ZP_13036854.1| PotD protein [Aggregatibacter actinomycetemcomitans RhAA1]
gi|359755420|gb|EHK89584.1| PotD protein [Aggregatibacter actinomycetemcomitans RhAA1]
Length = 365
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 84/191 (43%), Gaps = 15/191 (7%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQ 62
IA+ + ++ + W DLW+PE A ++ +++ REV L +G N+ +
Sbjct: 153 IAFNTNTYKGSDFT---SWGDLWKPEFANKVQLLDDAREVFNIALLKIGQDPNTQD---- 205
Query: 63 VAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVV 122
A K + ++ L L N F+S + +F G+V V W+ V A K + + +V
Sbjct: 206 PAIIKQAYEELLKLRPN-VLSFNSDNPANSFISGEVEVGQLWNGSVRIAKKEQAPLDMVF 264
Query: 123 PKSGASLWADLWAIP-------AASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFK 175
PK G LW D AIP A +L +G + L + L+ +ALP +
Sbjct: 265 PKEGPVLWVDTLAIPVTSKNPDGAHKLINYMLGAKAAEKLTLAIGYPTANLEAKKALPKE 324
Query: 176 QEVIPGASPSA 186
P PSA
Sbjct: 325 ITEDPAIYPSA 335
>gi|104784200|ref|YP_610698.1| putrescine ABC transporter periplasmic putrescine-binding protein
[Pseudomonas entomophila L48]
gi|95113187|emb|CAK17915.1| putrescine ABC transporter, periplasmic putrescine-binding protein
[Pseudomonas entomophila L48]
Length = 364
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 18/132 (13%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W L+ PE + ++ ++S E++ +VL YMG NS+N D Q A +
Sbjct: 152 IDSWAVLFEPENMKKLAKCGVAFLDSADEMLPAVLNYMGLDPNSSNPKDYQKA------E 205
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPA------VKRMSNVAVVVPKS 125
+ L + F S+ Y+ GD+ VA G+S DV A K+ +A +PK
Sbjct: 206 EKLLAVRPYVTYFHSSKYITDLANGDICVAAGFSGDVFQAKARAEEAKKGVKLAYAIPKE 265
Query: 126 GASLWADLWAIP 137
G +LW D+ AIP
Sbjct: 266 GGNLWFDVLAIP 277
>gi|381182867|ref|ZP_09891648.1| extracellular solute-binding protein family 1 [Listeriaceae
bacterium TTU M1-001]
gi|380317249|gb|EIA20587.1| extracellular solute-binding protein family 1 [Listeriaceae
bacterium TTU M1-001]
Length = 357
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 107/245 (43%), Gaps = 37/245 (15%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYN-SNNIDL 61
I Y K F N + W LW +L +I +++ REV+G L +G S N +N L
Sbjct: 143 IIYNKKMFPDKNF---DHWDSLWDKDLENQILLIDGAREVMGLGLNSLGYSLNDTNEKHL 199
Query: 62 QVAGGKI-SVQQNL-ALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVA 119
+ A K+ + N+ A++ ++ +L + + + VAV +S + + +++
Sbjct: 200 EEALLKLKKMTPNVKAIVGDEIKLLMADN--------EAGVAVTFSGEASEMLSENADLD 251
Query: 120 VVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVI 179
V+PK G++LW D IP ++ V G HQ+I F L+ A E +
Sbjct: 252 YVIPKEGSNLWFDNMVIPKTAK--------NVDGA----HQFINFMLKPENA-AINAEYV 298
Query: 180 PGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYEWL 239
A+P+ L LP+E+ SQD P L E + L + LS Y L
Sbjct: 299 GYATPNKAAIKL--LPKEI-----SQDKRF---YPDMNELDNLEVYDNLGKRMLSHYNEL 348
Query: 240 VADLQ 244
+ +
Sbjct: 349 FLEFK 353
>gi|417841023|ref|ZP_12487130.1| Spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
haemolyticus M19501]
gi|341950118|gb|EGT76711.1| Spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
haemolyticus M19501]
Length = 350
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 69/151 (45%), Gaps = 19/151 (12%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLAL 76
I W DLW+PE G++ M + REV L G S N+ N D++ A ++ L
Sbjct: 151 ITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIKTAYERLE-----KL 205
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
L N A F+S + G+ + + W+ A K ++ V PK GA W D +AI
Sbjct: 206 LPNIAT-FNSDSPEVPYVQGEAAIGMIWNGSAYLAHKENPSLQFVYPKEGAIFWMDNYAI 264
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQ 167
P ++ V G H++I+F L+
Sbjct: 265 PTTAK--------NVEG----AHKFIDFLLR 283
>gi|167856594|ref|ZP_02479296.1| PotD [Haemophilus parasuis 29755]
gi|167852275|gb|EDS23587.1| PotD [Haemophilus parasuis 29755]
Length = 277
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 5/126 (3%)
Query: 16 APIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLA 75
A + W DLW+PE + +++ PRE L MG N+ + A K + ++ L
Sbjct: 75 ANFQSWADLWKPEFKDTLQLLDDPREAFNIALLKMGQDPNTQD----PAILKAAYEELLK 130
Query: 76 LLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWA 135
L N F+S + +F G+V + W+ V A + + +V PK G LW D A
Sbjct: 131 LCPN-ILAFNSDNPSSSFISGEVEIGTLWNGSVRIAKNEGAKINMVYPKEGTPLWIDNLA 189
Query: 136 IPAASR 141
IPA S+
Sbjct: 190 IPATSQ 195
>gi|342903319|ref|ZP_08725130.1| Spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
haemolyticus M21621]
gi|341955423|gb|EGT81879.1| Spermidine/putrescine-binding periplasmic protein 2 [Haemophilus
haemolyticus M21621]
Length = 350
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 69/151 (45%), Gaps = 19/151 (12%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQQNLAL 76
I W DLW+PE G++ M + REV L G S N+ N D++ A ++ L
Sbjct: 151 ITSWADLWKPEFKGKVLMTSDAREVFHVALLLDGKSPNTTNEEDIKTAYERLE-----KL 205
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
L N A F+S + G+ + + W+ A K ++ V PK GA W D +AI
Sbjct: 206 LPNIAT-FNSDSPEVPYVQGEAAIGMIWNGSAYLAHKENPSLQFVYPKEGAIFWMDNYAI 264
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQ 167
P ++ V G H++I+F L+
Sbjct: 265 PTTAK--------NVEG----AHKFIDFLLR 283
>gi|398857198|ref|ZP_10612900.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM79]
gi|398241245|gb|EJN26901.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM79]
Length = 365
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 95/218 (43%), Gaps = 32/218 (14%)
Query: 3 IAYKKSKFRK--HNLAPIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYN 55
I Y +K ++ AP+ W L++PE A + IS ++SP E++ + L Y+ N
Sbjct: 136 IGYNPAKVKEVLGTDAPVNSWDLLFKPENAAKLKACGISFLDSPTEMLPAALHYLSYPVN 195
Query: 56 SNNIDLQVAGGKISVQQNLALLAN---QARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAV 112
S + K+ + + AL F S+ Y+ G++ VAVG+S DVL A
Sbjct: 196 SQD--------KVQIAEAEALFMKIRPSVAYFHSSKYISDLANGNICVAVGYSGDVLQAK 247
Query: 113 KRMSN------VAVVVPKSGASLWADLWAIP--AASRLETKQIGGRVRGPSPL--IHQWI 162
R + +PK GA + D+ AIP AA+ + P + + I
Sbjct: 248 ARAKEAGDKVKIEYSIPKEGAGSFYDMVAIPRDAANVDNAYLFMNFLMRPDIIAEVTNNI 307
Query: 163 EFCLQTARALPFKQEVI---PGAS-PSALETTLVKLPE 196
+ A A P E I PG+ P A+ TL +P+
Sbjct: 308 GYSNANAAATPLVDEAIRDDPGSYPPQAVMATLYAIPD 345
>gi|300716044|ref|YP_003740847.1| putrescine-binding periplasmic protein [Erwinia billingiae Eb661]
gi|299061880|emb|CAX58996.1| Putrescine-binding periplasmic protein [Erwinia billingiae Eb661]
Length = 369
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 17/138 (12%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKIS 69
AP++ W + +PE + +S +++P E+ +VL Y+G NS + D A +
Sbjct: 154 APVDSWDLVLKPENLEKLKSCGVSFLDAPEEIFATVLNYLGKDPNSTDPKDYSGAATDL- 212
Query: 70 VQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM------SNVAVVVP 123
L L R F S+ Y+ G+ VA+GW+ DVL A R ++A +P
Sbjct: 213 ----LLKLRPSIRYFHSSQYINDLANGNTCVAIGWAGDVLQAKNRAIEAKNGVHLAYSIP 268
Query: 124 KSGASLWADLWAIPAASR 141
K GA + D+ AIP ++
Sbjct: 269 KEGALAFFDMLAIPKDAK 286
>gi|343518390|ref|ZP_08755382.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
pittmaniae HK 85]
gi|343393678|gb|EGV06231.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
pittmaniae HK 85]
Length = 350
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 16 APIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLA 75
A + W DLW PE G++ + + REV L G S NS + A K + ++ L
Sbjct: 148 AKVTSWGDLWNPEYKGKVLLTSDSREVFHIALLLDGKSPNST----EEADIKAAYERLLK 203
Query: 76 LLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWA 135
LL N A F+S F G+V + + W+ K N+ V PK GA W D +A
Sbjct: 204 LLPNVAT-FNSDSPELPFVQGEVALGMLWNGSAYMGHKENPNLQFVYPKEGAIFWMDNYA 262
Query: 136 IPAASR 141
IP +R
Sbjct: 263 IPKNAR 268
>gi|421497340|ref|ZP_15944512.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Aeromonas media
WS]
gi|407183686|gb|EKE57571.1| spermidine/putrescine ABC transporter periplasmic
spermidine/putrescine-binding protein [Aeromonas media
WS]
Length = 361
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 18/133 (13%)
Query: 18 IEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNN-IDLQVAGGKISVQ 71
I+ W ++ PE ++S ++S E+I + L Y+G + NS++ DL+ A +
Sbjct: 149 IDSWATIFEPENMKKLSHCGVAFLDSADEMIPAALNYLGLNPNSHDPADLKRA------E 202
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKS 125
+ L + F S+ Y+ GD+ VA G+S D+L A R +A +PK
Sbjct: 203 EQLLKVRPYVTYFHSSKYIGDLANGDICVAAGFSGDILQAAARADEAGKGIKIAYSIPKE 262
Query: 126 GASLWADLWAIPA 138
G +LW D+ AIP+
Sbjct: 263 GGNLWFDMMAIPS 275
>gi|374703154|ref|ZP_09710024.1| extracellular solute-binding protein [Pseudomonas sp. S9]
Length = 364
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 23/186 (12%)
Query: 18 IEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQ 72
I+ W +++PE + +SM+++P EV + L Y+G N I V K ++
Sbjct: 152 IDSWDIIFKPENMDKLKSCGVSMLDAPEEVYAAALHYLGL----NPIAQSVEDVK-KAEE 206
Query: 73 NLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSN------VAVVVPKSG 126
L + F S+ Y+ G++ VA+GWS DV A R V+ V+PK G
Sbjct: 207 LLLKVRPDVTYFHSSKYISDLANGNICVALGWSGDVFQAEARAEEAKNGVPVSYVIPKEG 266
Query: 127 ASLWADLWAIPAASRL--ETKQIGGRVRGPSPL--IHQWIEFCLQTARALPFKQEVI--- 179
A+ + D+ AIPA ++ E + P + I ++ + A A P E I
Sbjct: 267 AAAFFDMMAIPADAKNADEAYTFLNYILKPEVIAPISDYVAYPNGNAAATPLVSEEIRNN 326
Query: 180 PGASPS 185
PG P+
Sbjct: 327 PGIYPT 332
>gi|414160396|ref|ZP_11416664.1| hypothetical protein HMPREF9310_01038 [Staphylococcus simulans
ACS-120-V-Sch1]
gi|410878294|gb|EKS26179.1| hypothetical protein HMPREF9310_01038 [Staphylococcus simulans
ACS-120-V-Sch1]
Length = 357
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 95/237 (40%), Gaps = 37/237 (15%)
Query: 3 IAYKKSKFRKHNLAPIEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNN---I 59
I Y K + + + W+ L+ P+ I +V+ REV+G L +G S N N +
Sbjct: 143 ILYNKDAYPHDDFSS---WRSLYNPKFKNDIILVDGAREVMGLSLNKLGYSLNETNPKRL 199
Query: 60 DLQVAGGKISVQQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVA 119
D + +LA LA Q + + +AV WS P V+
Sbjct: 200 D--------EAETDLAHLAPQVKGIVGDEVTMMLEQHEANIAVVWSGTAAPIVQENPEFD 251
Query: 120 VVVPKSGASLWADLWAIPAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVI 179
VVPK G++LW D IP ++ Q G +Q+I F L + E +
Sbjct: 252 YVVPKEGSNLWFDTMVIPKTAQ---NQAGA---------YQFINFLLDPKNSKQ-NTEWV 298
Query: 180 PGASPSALETTLVKLPEELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDY 236
A+P+ E +LP+E+ N P E +R E + L + L+DY
Sbjct: 299 GYATPN--EAAKKRLPKEI--------KNDQRFYPSKETQSRLEVYKDLGKDILNDY 345
>gi|374314451|ref|YP_005060879.1| spermidine/putrescine-binding periplasmic protein [Sphaerochaeta
pleomorpha str. Grapes]
gi|359350095|gb|AEV27869.1| spermidine/putrescine-binding periplasmic protein [Sphaerochaeta
pleomorpha str. Grapes]
Length = 352
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 14/127 (11%)
Query: 21 WKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALLANQ 80
W + GR+SM++ REV+G LK++G S NS + + +QQ + L+ N+
Sbjct: 156 WAIFGDKRMEGRMSMLDDMREVMGGALKHLGYSGNSTDGE--------ELQQAVDLIVNE 207
Query: 81 AR----LFDSTHYLKAFGIGDVWVAVGWSSDVLPAV--KRMSNVAVVVPKSGASLWADLW 134
+ FDS + K+F G+ WV+ +S ++ + + ++ +P G ++ D
Sbjct: 208 WKPNIVKFDSESFAKSFARGEFWVSQCYSENIFSEIPKDKWDDIDFFIPSEGGMMYIDNM 267
Query: 135 AIPAASR 141
IP S+
Sbjct: 268 VIPKGSK 274
>gi|157960774|ref|YP_001500808.1| extracellular solute-binding protein [Shewanella pealeana ATCC
700345]
gi|157845774|gb|ABV86273.1| extracellular solute-binding protein family 1 [Shewanella pealeana
ATCC 700345]
Length = 366
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 16/134 (11%)
Query: 16 APIEDWKDLWRPELAGRIS-----MVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ + ++ P+ A ++S +++S E+I L Y+G NS D G++
Sbjct: 152 APVDSLELIFNPKYAEKVSQCGLSLLDSADEMIPMALIYLGLDPNSTKADDFKKAGEV-- 209
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRM------SNVAVVVPK 124
LA + F S+ Y+ GD+ VA G+S D+ A R + + +PK
Sbjct: 210 ---LAKVRPYITYFHSSRYITDLANGDICVAFGYSGDIFQAADRADEAENGNTIEYSIPK 266
Query: 125 SGASLWADLWAIPA 138
G++LW D+ AIPA
Sbjct: 267 EGSNLWFDMLAIPA 280
>gi|398989313|ref|ZP_10692655.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM24]
gi|399016316|ref|ZP_10718539.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM16]
gi|398105497|gb|EJL95590.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM16]
gi|398147975|gb|EJM36667.1| spermidine/putrescine-binding periplasmic protein [Pseudomonas sp.
GM24]
Length = 365
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 95/201 (47%), Gaps = 24/201 (11%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP W L++PE A + IS ++SP E+I + L Y+G N D A K +
Sbjct: 151 APTNSWDLLFKPENAEKLKACGISFLDSPTEMIPAALHYLGYPVN----DKDTAHIKEAE 206
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLP----AVKRMSNVAV--VVPK 124
+ + N A F S+ Y+ G++ VAVG+S DVL AV+ +NV + +PK
Sbjct: 207 ALFMKIRPNVA-YFHSSKYISDLANGNICVAVGYSGDVLQAKARAVESGNNVVIDYSIPK 265
Query: 125 SGASLWADLWAIP-AASRLETKQIGGRVRGPSPLIHQWIE---FCLQTARALPFKQEVI- 179
GA + D+ AIP A+ ++ + +I + + A A P E I
Sbjct: 266 EGAGSFYDMVAIPRDAANVDNAYLFMDFLMRPDIIAEITNSNGYSNANAAATPLVDEAIR 325
Query: 180 --PGASPS-ALETTLVKLPEE 197
PG+ PS A+ TL +P++
Sbjct: 326 NDPGSYPSQAVMATLYAVPDQ 346
>gi|253681534|ref|ZP_04862331.1| spermidine/putrescine-binding periplasmic protein [Clostridium
botulinum D str. 1873]
gi|253561246|gb|EES90698.1| spermidine/putrescine-binding periplasmic protein [Clostridium
botulinum D str. 1873]
Length = 347
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 97/221 (43%), Gaps = 31/221 (14%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNI-DLQVAGGKISVQQNLAL 76
I+ W LW P+ +I MV+S R+ I LK +G S N+ N +L+ A ++ Q+ L
Sbjct: 148 IDSWNALWNPKYKDQILMVDSQRDAIAVALKKLGYSINTTNKGELKKAEQELMKQKPLV- 206
Query: 77 LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAI 136
+A + D L G + AV WS D + +K N+ V+PK G++LW D I
Sbjct: 207 ---RAYVGDEVKDLMVDEEGAI--AVVWSGDAITMMKNNPNLRYVIPKEGSNLWFDNMVI 261
Query: 137 PAASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPE 196
P S + + +I F + +L + I ++P+A T+ L +
Sbjct: 262 PKGSSHKKQA------------ELFINFMTRADISLK-NVDYIGYSTPNA--KTMEMLDD 306
Query: 197 ELLKGKPSQDTNLIVGVPPAEILARCEFLEPLSEATLSDYE 237
E K + P E + +CE L + + DY+
Sbjct: 307 ETKNNKAA--------YPEYEKIKKCEVFIDLGDF-IKDYD 338
>gi|146305384|ref|YP_001185849.1| extracellular solute-binding protein [Pseudomonas mendocina ymp]
gi|421505532|ref|ZP_15952470.1| extracellular solute-binding protein [Pseudomonas mendocina DLHK]
gi|145573585|gb|ABP83117.1| extracellular solute-binding protein, family 1 [Pseudomonas
mendocina ymp]
gi|400343941|gb|EJO92313.1| extracellular solute-binding protein [Pseudomonas mendocina DLHK]
Length = 365
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 90/189 (47%), Gaps = 25/189 (13%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP++ W +++PE + +S ++SP E++ + L Y+G + +S+ D ++
Sbjct: 151 APVDSWDLVFKPENMEKLKSCGVSFLDSPTEILPAALHYLGYAPDSSKAD------ELKK 204
Query: 71 QQNLAL-LANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVP 123
+ L L + F S+ Y+ G++ VA+G+S D+ + R NV +P
Sbjct: 205 AEELFLSIRPSVAYFHSSKYISDLANGNICVAIGYSGDIYQSKARAEEAKNGVNVGYNIP 264
Query: 124 KSGASLWADLWAIPA-ASRLETKQIG-GRVRGPSPL--IHQWIEFCLQTARALPFKQEVI 179
K GA + D+ A+PA A +E + + P+ + I +++F A A P E +
Sbjct: 265 KEGAGSFFDMLAVPADAKNVEAAHVFLNYLMEPAVMANITNYVQFPNGNAAATPLVDEAL 324
Query: 180 ---PGASPS 185
PG P+
Sbjct: 325 RTDPGVYPT 333
>gi|427427105|ref|ZP_18917150.1| Putrescine ABC transporter putrescine-binding protein PotF
[Caenispirillum salinarum AK4]
gi|425883806|gb|EKV32481.1| Putrescine ABC transporter putrescine-binding protein PotF
[Caenispirillum salinarum AK4]
Length = 368
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 16/134 (11%)
Query: 16 APIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISV 70
AP+ W L++PE A + I +++SP E+ + Y+G +N+++ ++ +
Sbjct: 154 APMNSWDLLFKPEYASKLADCGIYVLDSPSEIFPITMAYLGHPHNTDDPAHYQEAEELWM 213
Query: 71 QQNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPK 124
+ + + F S+ Y+ A GD +A+G+S DV A R V V+PK
Sbjct: 214 E-----IRPYIKKFHSSEYINALANGDACLAMGFSGDVFQAKFRAEEAGKDFTVGYVIPK 268
Query: 125 SGASLWADLWAIPA 138
G ++W D AIPA
Sbjct: 269 EGTAMWFDTLAIPA 282
>gi|386388626|ref|ZP_10073483.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
paraphrohaemolyticus HK411]
gi|385697477|gb|EIG27900.1| spermidine/putrescine ABC transporter, periplasmic
spermidine/putrescine-binding protein PotD [Haemophilus
paraphrohaemolyticus HK411]
Length = 346
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 31/203 (15%)
Query: 18 IEDWKDLWRPELAGRISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQQNLALL 77
I W DLWR E G++ ++N PREV L G S N+ N + A + L +
Sbjct: 145 ISSWGDLWRDEYKGKLLLMNDPREVFHIALLLDGKSPNTGNEEEIKAA-----YERLKTI 199
Query: 78 ANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMSNVAVVVPKSGASLWADLWAIP 137
+F+S + G+V V + WS A ++ + PK GA LW D + IP
Sbjct: 200 VPNVLVFNSDSPEMPYLQGEVAVGMQWSGSAHRAKSENPDLQFIFPKEGAVLWMDNYVIP 259
Query: 138 AASRLETKQIGGRVRGPSPLIHQWIEFCLQTARALPFKQEVIPGASPSALETTLVKLPEE 197
+ K+ H++I+F L+ P ++ +ET +P E
Sbjct: 260 KGAA--NKEAA----------HKFIDFLLR------------PESAKEVIETMGFSMPNE 295
Query: 198 LLKG--KPSQDTNLIVGVPPAEI 218
+K P ++ ++ P EI
Sbjct: 296 GVKALLSPELASDPLIFPPSEEI 318
>gi|418296592|ref|ZP_12908435.1| putrescine ABC transporter substrate-binding protein [Agrobacterium
tumefaciens CCNWGS0286]
gi|355538767|gb|EHH08009.1| putrescine ABC transporter substrate-binding protein [Agrobacterium
tumefaciens CCNWGS0286]
Length = 365
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 16/136 (11%)
Query: 17 PIEDWKDLWRPELAGR-----ISMVNSPREVIGSVLKYMGASYNSNNIDLQVAGGKISVQ 71
P++ W L++PE A + I+++++ E + Y+G + +S AGG++
Sbjct: 152 PVDSWDILFKPENAEKLKSCGINILDASDETFAIAMNYLGKNPDSKETADLEAGGEV--- 208
Query: 72 QNLALLANQARLFDSTHYLKAFGIGDVWVAVGWSSDVLPAVKRMS------NVAVVVPKS 125
+ + + F+S+ Y+ GD + +GWS D+L A R V ++PK
Sbjct: 209 --YSKIRPFVKTFNSSAYIDELANGDSCITIGWSGDILQAKSRAEEAKNGVEVNYIIPKE 266
Query: 126 GASLWADLWAIPAASR 141
G +W D AIPA ++
Sbjct: 267 GTYMWFDNLAIPADAK 282
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.133 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,313,616,562
Number of Sequences: 23463169
Number of extensions: 175317420
Number of successful extensions: 418028
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 2695
Number of HSP's that attempted gapping in prelim test: 412672
Number of HSP's gapped (non-prelim): 3798
length of query: 273
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 133
effective length of database: 9,074,351,707
effective search space: 1206888777031
effective search space used: 1206888777031
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 75 (33.5 bits)