Query 024050
Match_columns 273
No_of_seqs 174 out of 1726
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 17:19:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024050.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024050hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3v0s_A Perakine reductase; AKR 100.0 6.1E-65 2.1E-69 452.4 19.2 266 8-273 1-279 (337)
2 1pyf_A IOLS protein; beta-alph 100.0 1.7E-63 5.8E-68 439.0 26.6 264 8-273 1-279 (312)
3 3n2t_A Putative oxidoreductase 100.0 1.2E-63 3.9E-68 445.9 24.7 267 4-273 15-299 (348)
4 3eau_A Voltage-gated potassium 100.0 5.8E-63 2E-67 438.3 24.4 262 6-273 1-289 (327)
5 1pz1_A GSP69, general stress p 100.0 1.3E-62 4.6E-67 436.7 24.9 264 8-273 1-280 (333)
6 3n6q_A YGHZ aldo-keto reductas 100.0 5.1E-62 1.7E-66 435.3 25.6 268 1-273 4-301 (346)
7 3erp_A Putative oxidoreductase 100.0 1.3E-61 4.3E-66 433.5 25.8 262 7-273 33-318 (353)
8 3lut_A Voltage-gated potassium 100.0 3.4E-61 1.2E-65 432.9 24.3 260 7-273 37-323 (367)
9 1ynp_A Oxidoreductase, AKR11C1 100.0 2.5E-61 8.5E-66 425.6 21.3 257 4-273 17-276 (317)
10 1lqa_A TAS protein; TIM barrel 100.0 4.3E-60 1.5E-64 423.0 25.3 262 8-273 1-308 (346)
11 1ur3_M Hypothetical oxidoreduc 100.0 1.3E-59 4.3E-64 414.9 23.8 252 8-273 23-283 (319)
12 4exb_A Putative uncharacterize 100.0 1.7E-59 5.9E-64 409.1 19.9 238 1-273 23-271 (292)
13 3o0k_A Aldo/keto reductase; ss 100.0 2.6E-57 9E-62 393.5 20.5 228 3-273 21-253 (283)
14 3f7j_A YVGN protein; aldo-keto 100.0 1.3E-56 4.3E-61 388.3 22.4 225 6-273 4-232 (276)
15 3up8_A Putative 2,5-diketo-D-g 100.0 7.7E-57 2.6E-61 392.9 20.4 224 7-273 23-250 (298)
16 3b3e_A YVGN protein; aldo-keto 100.0 4.3E-56 1.5E-60 390.2 22.2 223 8-273 40-266 (310)
17 1hw6_A 2,5-diketo-D-gluconic a 100.0 2.7E-56 9.4E-61 386.6 20.0 227 6-273 1-232 (278)
18 4gie_A Prostaglandin F synthas 100.0 4.2E-56 1.4E-60 387.6 21.1 231 5-273 10-242 (290)
19 1gve_A Aflatoxin B1 aldehyde r 100.0 3.3E-56 1.1E-60 394.9 20.6 245 19-273 4-284 (327)
20 1afs_A 3-alpha-HSD, 3-alpha-hy 100.0 6.3E-56 2.2E-60 392.2 22.4 239 6-273 3-270 (323)
21 3ln3_A Dihydrodiol dehydrogena 100.0 9.3E-56 3.2E-60 391.5 23.4 239 6-273 4-271 (324)
22 2bp1_A Aflatoxin B1 aldehyde r 100.0 4.1E-56 1.4E-60 398.7 21.0 251 13-273 31-317 (360)
23 1vbj_A Prostaglandin F synthas 100.0 2.2E-55 7.4E-60 381.2 22.2 224 7-273 8-235 (281)
24 4f40_A Prostaglandin F2-alpha 100.0 1.4E-55 4.8E-60 384.0 20.8 225 7-273 9-244 (288)
25 2wzm_A Aldo-keto reductase; ox 100.0 1.3E-55 4.5E-60 382.9 20.0 226 5-273 8-238 (283)
26 3buv_A 3-OXO-5-beta-steroid 4- 100.0 4.1E-55 1.4E-59 387.5 23.5 240 6-273 5-273 (326)
27 1qwk_A Aldose reductase, aldo- 100.0 1.8E-55 6E-60 388.5 20.3 240 8-273 5-263 (317)
28 1s1p_A Aldo-keto reductase fam 100.0 3.6E-55 1.2E-59 388.5 22.3 239 6-273 3-270 (331)
29 1zgd_A Chalcone reductase; pol 100.0 2.6E-55 8.7E-60 386.6 19.8 233 7-273 5-263 (312)
30 3h7u_A Aldo-keto reductase; st 100.0 1E-54 3.5E-59 386.0 21.3 235 3-273 20-276 (335)
31 1mi3_A Xylose reductase, XR; a 100.0 1.5E-54 5.1E-59 383.4 20.0 237 6-273 3-274 (322)
32 3o3r_A Aldo-keto reductase fam 100.0 4.8E-54 1.6E-58 379.2 22.5 233 8-273 2-263 (316)
33 1us0_A Aldose reductase; oxido 100.0 8.9E-54 3E-58 377.5 23.3 233 8-273 2-263 (316)
34 1mzr_A 2,5-diketo-D-gluconate 100.0 3.9E-54 1.3E-58 375.5 20.7 225 6-273 23-252 (296)
35 3b3d_A YTBE protein, putative 100.0 1.1E-53 3.9E-58 376.1 21.2 224 9-273 41-270 (314)
36 3h7r_A Aldo-keto reductase; st 100.0 6.9E-54 2.4E-58 379.9 18.9 230 4-273 21-272 (331)
37 1vp5_A 2,5-diketo-D-gluconic a 100.0 1.9E-53 6.5E-58 371.5 21.4 223 9-273 15-245 (298)
38 3krb_A Aldose reductase; ssgci 100.0 3.1E-53 1.1E-57 376.4 20.0 237 7-273 11-284 (334)
39 4gac_A Alcohol dehydrogenase [ 100.0 1E-52 3.5E-57 372.1 22.0 234 7-273 1-262 (324)
40 2bgs_A Aldose reductase; holoe 100.0 4.8E-53 1.6E-57 375.8 20.0 226 6-273 34-283 (344)
41 3cf4_A Acetyl-COA decarboxylas 98.0 3E-06 1E-10 82.3 5.0 98 114-217 231-350 (807)
42 2pgw_A Muconate cycloisomerase 93.5 2.5 8.6E-05 37.1 14.9 154 39-215 147-303 (384)
43 2rdx_A Mandelate racemase/muco 93.4 0.82 2.8E-05 40.2 11.4 152 39-214 145-298 (379)
44 1mdl_A Mandelate racemase; iso 93.1 2.2 7.7E-05 37.0 13.9 150 39-211 144-298 (359)
45 2zad_A Muconate cycloisomerase 93.0 1.3 4.4E-05 38.4 12.0 156 39-215 139-296 (345)
46 2nql_A AGR_PAT_674P, isomerase 92.7 2.4 8.1E-05 37.4 13.5 155 39-216 164-321 (388)
47 1nu5_A Chloromuconate cycloiso 92.4 2.9 0.0001 36.4 13.6 155 39-216 142-302 (370)
48 2ovl_A Putative racemase; stru 92.4 3 0.0001 36.5 13.6 153 39-212 146-301 (371)
49 2qgy_A Enolase from the enviro 92.3 5.6 0.00019 35.0 15.6 153 39-212 149-304 (391)
50 3ik4_A Mandelate racemase/muco 91.9 3.5 0.00012 36.0 13.4 157 39-216 143-302 (365)
51 3i4k_A Muconate lactonizing en 91.9 6.1 0.00021 34.7 15.1 158 39-216 148-308 (383)
52 2qde_A Mandelate racemase/muco 91.7 2 6.9E-05 38.0 11.8 156 39-215 145-302 (397)
53 1r0m_A N-acylamino acid racema 91.6 2.4 8.3E-05 37.1 12.1 150 39-213 148-299 (375)
54 2o56_A Putative mandelate race 91.5 2.4 8.3E-05 37.5 12.1 154 39-213 152-326 (407)
55 2og9_A Mandelate racemase/muco 91.5 3.3 0.00011 36.5 13.0 151 39-212 162-317 (393)
56 1tkk_A Similar to chloromucona 91.3 3.3 0.00011 36.0 12.7 155 39-214 140-299 (366)
57 3r0u_A Enzyme of enolase super 91.3 6.1 0.00021 34.7 14.4 158 39-216 142-302 (379)
58 3jva_A Dipeptide epimerase; en 91.2 2.8 9.7E-05 36.4 12.1 154 39-213 139-294 (354)
59 3gd6_A Muconate cycloisomerase 91.0 2 6.8E-05 38.0 11.0 158 39-216 142-301 (391)
60 3eez_A Putative mandelate race 90.8 2.2 7.6E-05 37.5 11.1 154 39-216 145-300 (378)
61 3bjs_A Mandelate racemase/muco 90.6 3.9 0.00013 36.6 12.6 151 39-210 184-338 (428)
62 2ps2_A Putative mandelate race 90.5 1.7 5.9E-05 38.0 10.0 155 39-216 146-302 (371)
63 2gl5_A Putative dehydratase pr 90.4 6 0.00021 35.0 13.7 154 38-212 149-328 (410)
64 2pp0_A L-talarate/galactarate 90.3 4.9 0.00017 35.5 12.9 151 39-212 175-330 (398)
65 2p8b_A Mandelate racemase/muco 90.1 4.4 0.00015 35.3 12.3 155 39-214 141-298 (369)
66 2zc8_A N-acylamino acid racema 90.1 3 0.0001 36.4 11.2 151 39-214 141-293 (369)
67 2poz_A Putative dehydratase; o 89.6 4.9 0.00017 35.4 12.3 154 39-213 137-310 (392)
68 2qdd_A Mandelate racemase/muco 89.6 4.6 0.00016 35.3 12.1 150 39-215 145-299 (378)
69 3s5s_A Mandelate racemase/muco 89.3 4.9 0.00017 35.4 12.0 156 39-216 144-303 (389)
70 1sjd_A N-acylamino acid racema 89.0 9.7 0.00033 33.0 13.7 152 39-214 141-294 (368)
71 3mwc_A Mandelate racemase/muco 88.9 11 0.00039 33.2 14.2 150 40-215 164-317 (400)
72 3q45_A Mandelate racemase/muco 88.8 4.9 0.00017 35.1 11.6 157 39-216 140-298 (368)
73 3tj4_A Mandelate racemase; eno 88.8 6.8 0.00023 34.2 12.5 153 39-211 151-306 (372)
74 3i6e_A Muconate cycloisomerase 88.7 5.8 0.0002 34.9 12.1 157 39-216 148-306 (385)
75 2ox4_A Putative mandelate race 88.7 8.8 0.0003 33.8 13.4 155 38-213 145-320 (403)
76 3dg3_A Muconate cycloisomerase 88.4 2.8 9.5E-05 36.7 9.7 157 39-216 139-298 (367)
77 2qq6_A Mandelate racemase/muco 87.8 7.1 0.00024 34.5 12.2 154 39-213 149-321 (410)
78 4e8g_A Enolase, mandelate race 87.7 12 0.00041 32.9 13.5 155 39-217 164-322 (391)
79 1rvk_A Isomerase/lactonizing e 87.3 14 0.00046 32.3 13.6 151 39-210 149-309 (382)
80 3rr1_A GALD, putative D-galact 87.1 13 0.00045 32.8 13.4 151 39-212 125-288 (405)
81 4dwd_A Mandelate racemase/muco 86.7 13 0.00044 32.8 13.1 153 39-212 139-300 (393)
82 3fv9_G Mandelate racemase/muco 86.6 16 0.00054 32.0 14.7 156 39-216 145-306 (386)
83 3ozy_A Putative mandelate race 86.5 14 0.00048 32.4 13.2 152 39-211 151-305 (389)
84 2hzg_A Mandelate racemase/muco 85.6 18 0.00062 31.7 13.7 152 39-210 145-304 (401)
85 2hxt_A L-fuconate dehydratase; 85.6 9.1 0.00031 34.2 11.7 151 39-210 198-351 (441)
86 4dye_A Isomerase; enolase fami 85.6 7.7 0.00026 34.3 11.1 150 40-213 169-321 (398)
87 3u9i_A Mandelate racemase/muco 85.4 8.2 0.00028 34.0 11.1 157 39-216 165-332 (393)
88 1tzz_A Hypothetical protein L1 85.1 12 0.00041 32.8 12.1 151 39-210 165-325 (392)
89 2gdq_A YITF; mandelate racemas 84.4 9.2 0.00031 33.5 11.0 150 41-210 141-293 (382)
90 3ro6_B Putative chloromuconate 84.3 5.7 0.0002 34.4 9.5 157 39-216 140-299 (356)
91 3va8_A Probable dehydratase; e 83.5 17 0.00059 32.6 12.5 154 38-216 190-347 (445)
92 3my9_A Muconate cycloisomerase 83.5 11 0.00038 32.8 11.1 156 39-214 146-303 (377)
93 3qld_A Mandelate racemase/muco 83.3 16 0.00053 32.1 12.0 150 39-214 149-301 (388)
94 3vdg_A Probable glucarate dehy 82.7 21 0.00071 32.0 12.7 153 38-215 192-348 (445)
95 3toy_A Mandelate racemase/muco 82.4 25 0.00084 30.8 13.7 155 39-213 167-324 (383)
96 1wuf_A Hypothetical protein LI 82.3 18 0.00063 31.6 12.1 152 39-215 161-314 (393)
97 3sjn_A Mandelate racemase/muco 82.3 12 0.00042 32.6 10.9 154 39-212 146-304 (374)
98 3stp_A Galactonate dehydratase 81.5 22 0.00074 31.5 12.3 153 39-211 179-339 (412)
99 3vc5_A Mandelate racemase/muco 81.0 23 0.00078 31.7 12.3 153 38-215 187-343 (441)
100 3fcp_A L-Ala-D/L-Glu epimerase 80.5 26 0.0009 30.5 12.4 157 39-215 147-306 (381)
101 1kko_A 3-methylaspartate ammon 80.5 15 0.00052 32.5 10.9 87 126-213 268-361 (413)
102 3p3b_A Mandelate racemase/muco 79.9 9 0.00031 33.7 9.2 145 41-210 150-311 (392)
103 3r4e_A Mandelate racemase/muco 79.2 28 0.00096 30.8 12.3 155 39-213 143-331 (418)
104 2chr_A Chloromuconate cycloiso 78.9 22 0.00076 30.7 11.4 158 39-216 143-302 (370)
105 4a35_A Mitochondrial enolase s 78.2 35 0.0012 30.5 12.6 151 39-210 201-356 (441)
106 3rcy_A Mandelate racemase/muco 78.1 34 0.0012 30.4 12.5 154 39-212 146-313 (433)
107 3ddm_A Putative mandelate race 77.1 16 0.00054 32.1 9.9 152 40-211 156-309 (392)
108 2oz8_A MLL7089 protein; struct 76.0 39 0.0013 29.4 17.3 145 39-210 145-296 (389)
109 3v3w_A Starvation sensing prot 75.7 43 0.0015 29.7 13.2 155 39-213 149-337 (424)
110 4hnl_A Mandelate racemase/muco 75.5 22 0.00075 31.5 10.5 156 39-214 153-333 (421)
111 4e5t_A Mandelate racemase / mu 75.3 36 0.0012 29.9 11.8 153 39-211 151-317 (404)
112 3dgb_A Muconate cycloisomerase 75.0 32 0.0011 30.0 11.3 158 39-216 148-308 (382)
113 1chr_A Chloromuconate cycloiso 74.9 41 0.0014 29.1 15.1 157 40-216 143-302 (370)
114 1vpq_A Hypothetical protein TM 74.5 27 0.00093 29.0 10.1 136 45-209 39-179 (273)
115 3sbf_A Mandelate racemase / mu 74.2 45 0.0015 29.2 12.8 155 39-213 133-312 (401)
116 4g8t_A Glucarate dehydratase; 74.0 17 0.00057 32.8 9.4 157 39-214 202-361 (464)
117 3vcn_A Mannonate dehydratase; 73.1 43 0.0015 29.7 11.8 154 39-213 150-338 (425)
118 3ugv_A Enolase; enzyme functio 72.4 38 0.0013 29.6 11.1 155 39-213 171-330 (390)
119 2akz_A Gamma enolase, neural; 72.3 34 0.0012 30.6 10.8 96 105-209 270-368 (439)
120 1z41_A YQJM, probable NADH-dep 71.7 47 0.0016 28.4 11.3 95 84-183 209-306 (338)
121 4h1z_A Enolase Q92ZS5; dehydra 71.6 53 0.0018 28.9 14.4 155 39-217 188-346 (412)
122 3t6c_A RSPA, putative MAND fam 71.2 45 0.0015 29.7 11.4 70 143-212 279-350 (440)
123 2ftp_A Hydroxymethylglutaryl-C 71.1 12 0.00042 31.6 7.3 103 105-210 27-143 (302)
124 1ydn_A Hydroxymethylglutaryl-C 70.8 11 0.00037 31.7 6.9 106 105-213 23-142 (295)
125 4e4u_A Mandalate racemase/muco 69.1 60 0.0021 28.6 12.6 153 39-211 144-310 (412)
126 1nvm_A HOA, 4-hydroxy-2-oxoval 69.0 13 0.00044 32.1 7.1 104 105-210 27-139 (345)
127 3qtp_A Enolase 1; glycolysis, 69.0 61 0.0021 29.0 11.6 97 105-210 279-379 (441)
128 3hgj_A Chromate reductase; TIM 68.8 56 0.0019 28.0 12.2 141 37-183 141-317 (349)
129 2ozt_A TLR1174 protein; struct 68.3 55 0.0019 27.8 13.6 159 39-216 116-277 (332)
130 1nsj_A PRAI, phosphoribosyl an 68.2 24 0.00081 28.0 8.1 70 107-184 12-83 (205)
131 3pfr_A Mandelate racemase/muco 68.0 29 0.00098 31.2 9.5 156 39-213 185-343 (455)
132 4hpn_A Putative uncharacterize 67.7 60 0.0021 28.0 12.5 148 40-210 145-296 (378)
133 1gk8_I Ribulose bisphosphate c 67.6 13 0.00045 27.6 5.8 96 25-132 12-111 (140)
134 3p0w_A Mandelate racemase/muco 67.5 27 0.00093 31.5 9.2 156 39-213 200-358 (470)
135 4h83_A Mandelate racemase/muco 67.1 48 0.0016 28.9 10.6 152 39-210 164-318 (388)
136 3tji_A Mandelate racemase/muco 66.1 43 0.0015 29.6 10.2 154 39-212 154-332 (422)
137 3mzn_A Glucarate dehydratase; 65.7 26 0.00088 31.4 8.7 156 39-213 182-340 (450)
138 3go2_A Putative L-alanine-DL-g 65.5 63 0.0021 28.4 11.1 150 39-211 143-319 (409)
139 2yci_X 5-methyltetrahydrofolat 65.4 55 0.0019 27.1 10.1 103 106-216 32-137 (271)
140 3qy7_A Tyrosine-protein phosph 65.3 56 0.0019 26.8 11.6 158 38-211 17-193 (262)
141 1y80_A Predicted cobalamin bin 65.2 22 0.00075 28.0 7.4 154 39-210 15-177 (210)
142 1f6y_A 5-methyltetrahydrofolat 63.3 62 0.0021 26.6 10.8 100 106-212 23-124 (262)
143 1wue_A Mandelate racemase/muco 63.1 75 0.0026 27.5 11.3 151 39-215 161-314 (386)
144 3k13_A 5-methyltetrahydrofolat 62.4 70 0.0024 26.9 11.3 99 106-212 35-141 (300)
145 2wje_A CPS4B, tyrosine-protein 61.7 61 0.0021 26.0 10.9 156 39-211 22-202 (247)
146 1v5x_A PRA isomerase, phosphor 61.2 26 0.00091 27.7 7.1 70 107-184 11-82 (203)
147 1ydo_A HMG-COA lyase; TIM-barr 61.0 20 0.00068 30.4 6.7 103 105-210 25-141 (307)
148 2p0o_A Hypothetical protein DU 59.7 29 0.001 30.3 7.5 150 39-215 15-182 (372)
149 3l5l_A Xenobiotic reductase A; 59.7 85 0.0029 27.0 11.0 142 37-183 147-324 (363)
150 1kcz_A Beta-methylaspartase; b 58.1 46 0.0016 29.3 8.9 82 130-211 271-359 (413)
151 2gou_A Oxidoreductase, FMN-bin 57.8 93 0.0032 26.9 10.7 69 112-184 253-322 (365)
152 2h9a_B CO dehydrogenase/acetyl 57.4 57 0.0019 27.7 8.9 95 110-212 76-181 (310)
153 1tx2_A DHPS, dihydropteroate s 57.1 45 0.0015 28.1 8.2 99 107-212 62-167 (297)
154 1x7f_A Outer surface protein; 56.7 8.3 0.00028 33.9 3.6 162 39-221 39-213 (385)
155 2al1_A Enolase 1, 2-phospho-D- 56.3 86 0.0029 27.9 10.3 97 105-210 273-372 (436)
156 4djd_D C/Fe-SP, corrinoid/iron 56.1 52 0.0018 28.1 8.4 96 111-212 83-188 (323)
157 2ptz_A Enolase; lyase, glycoly 55.9 1E+02 0.0035 27.3 10.8 96 106-210 273-373 (432)
158 1ps9_A 2,4-dienoyl-COA reducta 55.9 76 0.0026 29.7 10.5 136 42-183 142-309 (671)
159 1vp8_A Hypothetical protein AF 55.9 50 0.0017 26.0 7.5 88 128-216 17-110 (201)
160 1t57_A Conserved protein MTH16 55.2 51 0.0018 26.0 7.5 88 128-216 25-117 (206)
161 1olt_A Oxygen-independent copr 54.6 33 0.0011 30.7 7.4 59 105-165 217-291 (457)
162 2fkn_A Urocanate hydratase; ro 54.5 30 0.001 31.3 6.8 116 46-175 113-250 (552)
163 3mkc_A Racemase; metabolic pro 54.3 1.1E+02 0.0037 26.6 13.3 150 42-212 160-316 (394)
164 1x87_A Urocanase protein; stru 54.0 31 0.0011 31.3 6.7 96 66-175 142-249 (551)
165 2pa6_A Enolase; glycolysis, ly 53.0 1.1E+02 0.0037 27.0 10.5 94 106-209 268-365 (427)
166 2r14_A Morphinone reductase; H 52.8 1.1E+02 0.0039 26.4 10.7 69 112-183 258-327 (377)
167 2cw6_A Hydroxymethylglutaryl-C 52.4 27 0.00091 29.3 6.0 104 105-211 24-141 (298)
168 2xvc_A ESCRT-III, SSO0910; cel 51.7 13 0.00043 23.1 2.7 20 138-157 37-56 (59)
169 3iix_A Biotin synthetase, puta 50.8 1E+02 0.0036 25.8 9.7 101 38-155 84-192 (348)
170 1eye_A DHPS 1, dihydropteroate 50.5 1.1E+02 0.0037 25.5 11.1 100 106-212 27-132 (280)
171 1bxn_I Rubisco, protein (ribul 50.4 74 0.0025 23.5 8.2 85 22-133 2-87 (139)
172 3ftb_A Histidinol-phosphate am 50.4 1.1E+02 0.0037 25.4 12.1 140 40-214 41-187 (361)
173 3tqp_A Enolase; energy metabol 50.1 1.2E+02 0.004 27.0 10.1 130 73-211 224-365 (428)
174 2q5c_A NTRC family transcripti 49.8 50 0.0017 25.8 6.9 68 139-211 79-149 (196)
175 1bwv_S Rubisco, protein (ribul 49.6 76 0.0026 23.4 8.6 84 22-132 2-86 (138)
176 3uj2_A Enolase 1; enzyme funct 49.6 98 0.0033 27.7 9.5 129 73-210 246-390 (449)
177 1uwk_A Urocanate hydratase; hy 49.4 31 0.0011 31.3 6.0 116 46-175 117-254 (557)
178 3fvs_A Kynurenine--oxoglutarat 48.8 1.3E+02 0.0043 25.7 12.4 151 39-220 42-223 (422)
179 3ekg_A Mandelate racemase/muco 48.0 62 0.0021 28.5 7.9 69 143-211 249-321 (404)
180 2pge_A MENC; OSBS, NYSGXRC, PS 47.3 78 0.0027 27.3 8.4 155 39-216 162-324 (377)
181 2c4w_A 3-dehydroquinate dehydr 47.2 70 0.0024 24.6 6.9 81 104-191 33-118 (176)
182 3mqt_A Mandelate racemase/muco 46.9 1.4E+02 0.0049 25.8 12.9 150 42-212 155-311 (394)
183 3dip_A Enolase; structural gen 46.8 1E+02 0.0036 27.0 9.2 149 44-212 161-324 (410)
184 1aj0_A DHPS, dihydropteroate s 46.7 1.1E+02 0.0038 25.4 8.9 98 107-212 37-141 (282)
185 3l5a_A NADH/flavin oxidoreduct 45.5 1.5E+02 0.0051 26.1 10.0 140 38-183 160-345 (419)
186 2p3z_A L-rhamnonate dehydratas 44.8 77 0.0026 28.0 8.0 81 127-212 249-333 (415)
187 2okt_A OSB synthetase, O-succi 43.7 21 0.00071 30.6 4.0 86 126-216 191-277 (342)
188 3mwd_B ATP-citrate synthase; A 43.7 57 0.0019 28.0 6.8 84 66-157 234-325 (334)
189 2i2x_B MTAC, methyltransferase 43.0 1E+02 0.0036 25.0 8.2 150 39-206 51-204 (258)
190 2uyg_A 3-dehydroquinate dehydr 43.0 71 0.0024 23.9 6.3 100 104-220 23-125 (149)
191 2fym_A Enolase; RNA degradosom 42.6 1.8E+02 0.006 25.6 11.9 99 105-213 267-371 (431)
192 3aty_A Tcoye, prostaglandin F2 42.0 1.7E+02 0.0059 25.3 11.9 137 38-183 163-335 (379)
193 1lt8_A Betaine-homocysteine me 41.8 1.8E+02 0.0062 25.5 14.1 169 39-216 52-252 (406)
194 3ezx_A MMCP 1, monomethylamine 41.7 83 0.0029 24.9 7.1 149 39-205 17-174 (215)
195 2z61_A Probable aspartate amin 40.6 1.6E+02 0.0054 24.5 13.9 143 40-218 44-197 (370)
196 1nvm_A HOA, 4-hydroxy-2-oxoval 40.3 1.7E+02 0.0059 24.8 14.9 25 37-61 26-50 (345)
197 3l8a_A METC, putative aminotra 39.6 1.8E+02 0.0061 24.9 13.0 150 39-220 75-243 (421)
198 3tcs_A Racemase, putative; PSI 39.5 1.9E+02 0.0065 25.1 12.9 152 40-212 148-309 (388)
199 3ewb_X 2-isopropylmalate synth 39.4 1.7E+02 0.0056 24.4 10.4 25 38-62 24-48 (293)
200 3ri6_A O-acetylhomoserine sulf 39.2 2E+02 0.0067 25.2 10.2 100 113-218 109-211 (430)
201 4h2h_A Mandelate racemase/muco 39.1 1.9E+02 0.0063 24.9 12.4 152 39-216 150-307 (376)
202 3dxi_A Putative aldolase; TIM 39.0 1.8E+02 0.0061 24.6 9.6 105 105-210 21-133 (320)
203 3h14_A Aminotransferase, class 38.8 1.7E+02 0.006 24.5 11.5 141 40-215 46-205 (391)
204 3v5c_A Mandelate racemase/muco 38.8 1.9E+02 0.0066 25.0 12.9 88 116-212 219-313 (392)
205 4f0h_B Ribulose bisphosphate c 38.4 1.2E+02 0.004 22.4 8.6 83 23-132 3-86 (138)
206 4dxk_A Mandelate racemase / mu 38.2 54 0.0018 28.7 5.9 88 116-212 231-320 (400)
207 3gka_A N-ethylmaleimide reduct 38.2 1.9E+02 0.0066 24.8 10.9 63 112-183 253-315 (361)
208 2dqw_A Dihydropteroate synthas 38.0 1.3E+02 0.0046 25.1 8.1 86 120-212 63-154 (294)
209 1rbl_M Ribulose 1,5 bisphospha 37.4 1.1E+02 0.0037 21.6 8.1 83 24-133 10-93 (109)
210 3gr7_A NADPH dehydrogenase; fl 36.7 2E+02 0.0067 24.5 12.2 95 84-183 209-306 (340)
211 2pju_A Propionate catabolism o 36.7 39 0.0013 27.2 4.4 71 139-212 91-162 (225)
212 1w6t_A Enolase; bacterial infe 35.7 2.1E+02 0.0073 25.3 9.5 96 105-209 279-379 (444)
213 1tv8_A MOAA, molybdenum cofact 35.6 1.9E+02 0.0066 24.1 13.4 118 38-174 50-182 (340)
214 1icp_A OPR1, 12-oxophytodienoa 35.5 2.2E+02 0.0074 24.6 10.1 135 41-183 167-329 (376)
215 1qwg_A PSL synthase;, (2R)-pho 35.4 1.7E+02 0.0057 24.0 7.9 98 111-209 25-132 (251)
216 1pii_A N-(5'phosphoribosyl)ant 35.2 89 0.0031 28.0 6.9 63 119-185 272-335 (452)
217 4gxw_A Adenosine deaminase; am 35.0 2.2E+02 0.0076 24.6 10.9 104 106-214 163-268 (380)
218 3fst_A 5,10-methylenetetrahydr 34.3 2E+02 0.007 24.0 8.7 152 44-217 42-211 (304)
219 3ktc_A Xylose isomerase; putat 34.1 23 0.00079 29.9 2.8 62 18-79 5-72 (333)
220 3rys_A Adenosine deaminase 1; 33.8 2.2E+02 0.0076 24.2 10.0 100 105-209 146-246 (343)
221 3sma_A FRBF; N-acetyl transfer 32.7 56 0.0019 27.4 4.8 52 111-162 24-81 (286)
222 3ijw_A Aminoglycoside N3-acety 32.4 37 0.0013 28.2 3.6 50 111-160 17-72 (268)
223 4djd_C C/Fe-SP, corrinoid/iron 32.2 2.6E+02 0.0087 25.0 9.2 99 106-212 103-209 (446)
224 3sfw_A Dihydropyrimidinase; hy 32.1 2.6E+02 0.0088 24.4 10.0 107 40-159 71-182 (461)
225 2vp8_A Dihydropteroate synthas 31.9 1.6E+02 0.0054 25.0 7.6 97 107-211 64-167 (318)
226 4hvk_A Probable cysteine desul 31.8 2E+02 0.0068 23.7 8.5 45 165-210 127-173 (382)
227 3no3_A Glycerophosphodiester p 31.8 63 0.0022 25.9 5.0 22 39-60 19-40 (238)
228 1q7z_A 5-methyltetrahydrofolat 31.8 1.5E+02 0.0053 27.2 8.1 100 106-211 338-438 (566)
229 3noy_A 4-hydroxy-3-methylbut-2 31.5 1.7E+02 0.006 25.3 7.7 104 106-219 44-151 (366)
230 1gqo_A Dehydroquinase; dehydra 31.4 1.6E+02 0.0055 21.8 6.6 81 104-191 24-106 (143)
231 2cw6_A Hydroxymethylglutaryl-C 31.0 2.3E+02 0.0077 23.4 11.3 26 37-62 23-48 (298)
232 2ph5_A Homospermidine synthase 30.9 17 0.00057 33.0 1.4 23 40-62 93-115 (480)
233 1h05_A 3-dehydroquinate dehydr 30.8 1.7E+02 0.0056 21.8 8.3 81 104-191 26-108 (146)
234 3otr_A Enolase; structural gen 30.6 2.9E+02 0.01 24.6 10.9 100 105-211 281-383 (452)
235 3dzz_A Putative pyridoxal 5'-p 30.4 2.4E+02 0.0081 23.5 14.5 149 39-220 41-209 (391)
236 1svd_M Ribulose bisphosphate c 30.2 1.4E+02 0.0049 21.0 8.0 83 24-133 12-95 (110)
237 3qhx_A Cystathionine gamma-syn 30.1 2.6E+02 0.0088 23.8 9.7 87 127-217 106-194 (392)
238 3ks6_A Glycerophosphoryl diest 30.0 1E+02 0.0035 24.8 6.0 19 194-212 194-212 (250)
239 1wv2_A Thiazole moeity, thiazo 30.0 2.3E+02 0.008 23.3 10.8 110 104-219 83-198 (265)
240 2a5h_A L-lysine 2,3-aminomutas 29.5 2.8E+02 0.0097 24.1 10.2 108 104-217 144-265 (416)
241 4ab4_A Xenobiotic reductase B; 29.4 2.7E+02 0.0093 23.9 11.0 63 112-183 245-307 (362)
242 3ngj_A Deoxyribose-phosphate a 29.2 40 0.0014 27.4 3.3 28 39-66 155-182 (239)
243 2ksn_A Ubiquitin domain-contai 28.8 18 0.0006 26.7 0.9 14 56-70 44-57 (137)
244 3v7e_A Ribosome-associated pro 28.8 1.2E+02 0.0042 19.7 5.3 58 147-211 3-60 (82)
245 1wa3_A 2-keto-3-deoxy-6-phosph 28.5 1.6E+02 0.0056 22.5 6.8 89 106-209 20-109 (205)
246 1v0l_A Endo-1,4-beta-xylanase 28.4 85 0.0029 26.4 5.4 106 106-214 147-270 (313)
247 1vyr_A Pentaerythritol tetrani 27.7 2.9E+02 0.0099 23.6 14.0 67 113-183 255-322 (364)
248 3qn3_A Enolase; structural gen 27.6 3.1E+02 0.011 24.0 10.4 136 69-213 220-365 (417)
249 2nyg_A YOKD protein; PFAM02522 27.6 53 0.0018 27.3 3.8 47 111-157 15-67 (273)
250 1ep3_A Dihydroorotate dehydrog 27.2 88 0.003 25.9 5.3 39 144-183 230-269 (311)
251 2jya_A AGR_C_3324P, uncharacte 26.4 44 0.0015 23.5 2.6 21 194-214 62-82 (106)
252 4e5v_A Putative THUA-like prot 26.1 2.7E+02 0.0091 22.9 8.0 66 107-174 18-110 (281)
253 2gwg_A 4-oxalomesaconate hydra 26.0 2.9E+02 0.0098 23.1 8.8 70 143-212 92-180 (350)
254 3o9z_A Lipopolysaccaride biosy 25.8 1.5E+02 0.0053 24.6 6.6 43 106-155 55-97 (312)
255 3fxg_A Rhamnonate dehydratase; 25.7 86 0.003 28.1 5.1 70 143-212 255-327 (455)
256 3ijl_A Muconate cycloisomerase 25.6 1.3E+02 0.0043 25.6 6.0 85 126-216 200-286 (338)
257 3cyj_A Mandelate racemase/muco 25.5 3.1E+02 0.011 23.3 15.4 153 39-213 144-300 (372)
258 2pz0_A Glycerophosphoryl diest 25.4 97 0.0033 24.9 5.1 21 40-60 25-45 (252)
259 4e4f_A Mannonate dehydratase; 25.2 1.3E+02 0.0045 26.5 6.2 69 144-212 268-338 (426)
260 3qc0_A Sugar isomerase; TIM ba 25.2 1.7E+02 0.0058 23.1 6.6 37 19-62 3-39 (275)
261 4ggi_A UDP-2,3-diacylglucosami 25.1 89 0.003 25.9 4.8 45 166-212 234-279 (283)
262 3l12_A Putative glycerophospho 25.0 1.5E+02 0.005 24.8 6.2 34 142-175 165-199 (313)
263 1ta3_B Endo-1,4-beta-xylanase; 24.8 1.7E+02 0.0059 24.3 6.6 104 107-213 149-271 (303)
264 3dc8_A Dihydropyrimidinase; TI 24.8 3.7E+02 0.013 23.9 10.0 109 39-157 68-177 (490)
265 3rmj_A 2-isopropylmalate synth 24.7 3.4E+02 0.011 23.4 10.4 182 37-221 30-246 (370)
266 3ch0_A Glycerophosphodiester p 24.7 1.8E+02 0.0061 23.5 6.6 60 149-212 161-244 (272)
267 3ndn_A O-succinylhomoserine su 24.4 3.4E+02 0.012 23.4 11.0 98 113-216 108-208 (414)
268 2opj_A O-succinylbenzoate-COA 24.4 1.2E+02 0.0042 25.6 5.7 83 126-216 150-233 (327)
269 1vd6_A Glycerophosphoryl diest 24.0 2.6E+02 0.0088 21.8 8.0 147 40-212 21-194 (224)
270 2po3_A 4-dehydrase; external a 24.0 3.3E+02 0.011 23.1 14.8 79 127-214 91-175 (424)
271 1zcc_A Glycerophosphodiester p 23.9 1.2E+02 0.004 24.4 5.3 58 152-212 123-202 (248)
272 2pgf_A Adenosine deaminase; me 23.8 2.1E+02 0.0073 24.5 7.2 97 110-214 188-288 (371)
273 4f3h_A Fimxeal, putative uncha 23.5 2.1E+02 0.0072 22.6 6.8 100 107-210 108-219 (250)
274 3j21_Z 50S ribosomal protein L 23.5 1.7E+02 0.006 19.7 5.8 59 143-210 3-63 (99)
275 1i1w_A Endo-1,4-beta-xylanase; 23.3 2.7E+02 0.0094 23.0 7.6 104 107-213 150-270 (303)
276 3mz2_A Glycerophosphoryl diest 23.0 1E+02 0.0035 25.6 4.8 65 148-212 149-236 (292)
277 2lju_A Putative oxidoreductase 22.8 44 0.0015 23.6 2.1 21 194-214 70-90 (108)
278 3lte_A Response regulator; str 22.7 1.5E+02 0.0052 20.0 5.2 57 124-183 49-108 (132)
279 3cpq_A 50S ribosomal protein L 22.5 2E+02 0.0067 19.9 5.7 62 142-210 8-69 (110)
280 1o94_A Tmadh, trimethylamine d 22.1 5E+02 0.017 24.4 10.8 95 83-183 215-320 (729)
281 2vef_A Dihydropteroate synthas 22.0 3.5E+02 0.012 22.7 9.6 87 120-211 44-136 (314)
282 2y5s_A DHPS, dihydropteroate s 22.0 1.7E+02 0.0057 24.5 5.9 98 107-212 45-148 (294)
283 4ao9_A Beta-phenylalanine amin 21.9 4.2E+02 0.014 23.5 9.9 144 39-214 104-264 (454)
284 1wdd_S Ribulose bisphosphate c 21.9 2.3E+02 0.0079 20.5 8.4 89 25-132 12-104 (128)
285 3emz_A Xylanase, endo-1,4-beta 21.7 1.8E+02 0.0061 24.7 6.1 106 106-214 153-294 (331)
286 2h9a_A Carbon monoxide dehydro 21.4 4.3E+02 0.015 23.4 9.4 77 126-212 128-208 (445)
287 2d1z_A Endo-1,4-beta-D-xylanas 21.3 1.3E+02 0.0044 26.5 5.4 105 106-213 147-269 (436)
288 3ose_A Serine/threonine-protei 21.2 78 0.0027 22.6 3.2 23 104-126 36-58 (120)
289 3en0_A Cyanophycinase; serine 21.2 1.6E+02 0.0056 24.5 5.7 57 107-163 69-153 (291)
290 3abi_A Putative uncharacterize 21.1 1.7E+02 0.0057 24.9 6.0 77 38-114 85-185 (365)
291 2w8t_A SPT, serine palmitoyltr 20.8 3.9E+02 0.013 22.7 15.0 86 125-218 147-238 (427)
292 3kru_A NADH:flavin oxidoreduct 20.4 4E+02 0.014 22.6 10.9 138 37-183 132-306 (343)
293 3pff_A ATP-citrate synthase; p 20.3 2.3E+02 0.0077 27.6 7.1 84 66-157 720-811 (829)
294 3ix3_A Transcriptional activat 20.3 2.2E+02 0.0074 21.0 5.9 30 105-134 14-43 (173)
295 1gtz_A 3-dehydroquinate dehydr 20.1 2.1E+02 0.0071 21.6 5.4 81 104-191 30-113 (156)
No 1
>3v0s_A Perakine reductase; AKR superfamily, oxidoreductase; HET: MLZ M3L MLY ATR; 1.77A {Rauvolfia serpentina} PDB: 3v0u_A 3v0t_A* 3uyi_A*
Probab=100.00 E-value=6.1e-65 Score=452.45 Aligned_cols=266 Identities=64% Similarity=1.043 Sum_probs=226.2
Q ss_pred CCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCC-CcHHHHHHHHHhcCCCCCEE
Q 024050 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ-NANEVLLGKALKQLPREKIQ 86 (273)
Q Consensus 8 m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~-g~se~~lg~~l~~~~r~~~~ 86 (273)
|+||+||+||++||+||||||++|..|+...+.+++.++|++|+++|||+||||+.||. |.||+.+|++|++.+|+++|
T Consensus 1 M~~~~lg~tg~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~G~sE~~lG~al~~~~R~~~~ 80 (337)
T 3v0s_A 1 MPRVKLGTQGLEVSKLGFGCMGLSGDYNDALPEEQGIAVIKEAFNCGITFFDTSDIYGENGSNEELLGKALKQLPREXIQ 80 (337)
T ss_dssp CCEEECSSSSCEEESSCEECGGGC-------CHHHHHHHHHHHHHTTCCEEECCTTSSSTTHHHHHHHHHHTTSCGGGCE
T ss_pred CCeeecCCCCceecCeeecccccCCCCCCCCCHHHHHHHHHHHHHcCCCEEEChhhhCCCCcHHHHHHHHHhhcCCcceE
Confidence 89999999999999999999999877776668999999999999999999999999997 68999999999966899999
Q ss_pred EEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCCCH
Q 024050 87 VATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASP 166 (273)
Q Consensus 87 i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~~ 166 (273)
|+||++......+....+.+++.+++++++||+|||+||||+|++|+|+...+.+++|++|++|+++||||+||||||++
T Consensus 81 i~TK~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~ 160 (337)
T 3v0s_A 81 VGTKFGIHEIGFSGVKAXGTPDYVRSCCEASLKRLDVDYIDLFYIHRIDTTVPIEITMGELXXLVEEGKIXYVGLSEASP 160 (337)
T ss_dssp EEEEECEEEEETTEEEECCCHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCH
T ss_pred EEeeeccccCCCCcccCCCCHHHHHHHHHHHHHHhCCCCeeEEEecCCCCCCCHHHHHHHHHHHHHCCCeeEEeccCCCH
Confidence 99999875422222344678999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhh------------
Q 024050 167 GTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLV------------ 234 (273)
Q Consensus 167 ~~l~~~~~~~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~------------ 234 (273)
++++++++..+++++|++||+++++.+.+++++|+++||+|++|+||++|+|+|+...+.++.++...
T Consensus 161 ~~l~~~~~~~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~L~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (337)
T 3v0s_A 161 DTIRRAHAVHPVTALQIEYSLWTRDIEDEIVPLCRQLGIGIVPYSPIGRGLFWGKAIKESLPENSVLTSHPRFVGENLEK 240 (337)
T ss_dssp HHHHHHHHHSCCCEEEEECBTTBCGGGTTHHHHHHHHTCEEEEESTTHHHHHHHHHHHC---------------------
T ss_pred HHHHHHhccCCceEEEeeccccccchhHHHHHHHHHcCceEEEeccccCcccCCCCCCCCCCCcchhhcccccchhhhhh
Confidence 99999999999999999999999987788999999999999999999999999862222222221111
Q ss_pred hccCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 235 QRREPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.....+.+.++|.++|+|++|+||+|++++|.|.++++|
T Consensus 241 ~~~~~~~l~~ia~~~g~t~aqvaL~w~l~~~~v~~~I~g 279 (337)
T 3v0s_A 241 NKQIYYRIEALSQKHGCTPVQLALAWVLHQGEDVVPIPG 279 (337)
T ss_dssp ----CHHHHHHHHHTTSCHHHHHHHHHHTTCTTBCCCCC
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCeEEEcC
Confidence 011124678999999999999999999999999999987
No 2
>1pyf_A IOLS protein; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; 1.80A {Bacillus subtilis} SCOP: c.1.7.1 PDB: 1pz0_A*
Probab=100.00 E-value=1.7e-63 Score=439.02 Aligned_cols=264 Identities=28% Similarity=0.514 Sum_probs=228.2
Q ss_pred CCcccCCCCCcccCcceeccccCCCC--CCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCE
Q 024050 8 VPRVKLGTQGLEVSKLGYGCMNLSGG--YSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKI 85 (273)
Q Consensus 8 m~~r~lg~sg~~vs~lglG~~~~~~~--~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~ 85 (273)
|+||+||+||++||+||||||+++.. |+ ..+++++.++|++|+++|||+||||+.||.|.||+.+|++|+..+|+++
T Consensus 1 M~~~~lg~tg~~vs~lglGt~~~g~~~~~~-~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~R~~~ 79 (312)
T 1pyf_A 1 MKKAKLGKSDLQVFPIGLGTNAVGGHNLYP-NLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFNREDV 79 (312)
T ss_dssp -CCEECTTSCCEECSBCEECTTSSCTTTCS-SCCHHHHHHHHHHHHHTTCCEEECCTTTTTTHHHHHHHHHHTTSCGGGC
T ss_pred CCeeecCCCCCcccCEeEeccccCCCCCCC-CCCHHHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHhhhcCCCeE
Confidence 78999999999999999999999863 43 2478999999999999999999999999999999999999985589999
Q ss_pred EEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCCC
Q 024050 86 QVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEAS 165 (273)
Q Consensus 86 ~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~ 165 (273)
||+||++.... .+.+..+.+++.+++++++||+|||+||||+|++|+|+...+.+++|++|++|+++||||+||||||+
T Consensus 80 ~i~TK~g~~~~-~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~ 158 (312)
T 1pyf_A 80 VIATKAAHRKQ-GNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFS 158 (312)
T ss_dssp EEEEEECEEEE-TTEEEECCCHHHHHHHHHHHHHHHTSSCBSEEEECSCCSSSCHHHHHHHHHHHHHTTSBSCEEEESCC
T ss_pred EEEEEeCCCCC-CCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCHHHHHHHHHHHHHCCCcCEEEecCCC
Confidence 99999762211 11112457899999999999999999999999999999888999999999999999999999999999
Q ss_pred HHHHHHHhhcCCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCC-CCCCchhhhh--cc-----
Q 024050 166 PGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVE-NVPADSFLVQ--RR----- 237 (273)
Q Consensus 166 ~~~l~~~~~~~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~-~~~~~~~~~~--~~----- 237 (273)
+++++++++..+|+++|++||+++++.+.+++++|+++||+|++|+||++|+|++++... .++..+.... ++
T Consensus 159 ~~~l~~~~~~~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~L~~~~~~~~~~~~~~~r~~~~~~~~~~~ 238 (312)
T 1pyf_A 159 LEQLKEANKDGLVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVSGLLAGKYTEDTTFPEGDLRNEQEHFKGERF 238 (312)
T ss_dssp HHHHHHHTTTSCCCEEEEECBTTBCGGGTTHHHHHHHHTCEEEEESTTTTTGGGTCCCTTCCCCTTCGGGGSGGGSHHHH
T ss_pred HHHHHHHHhhCCceEEeccCCccccchHHHHHHHHHHcCCeEEEecccccccccCCCCCCCCCCCcccccccccccchhH
Confidence 999999999989999999999999987778999999999999999999999999985332 2333222100 00
Q ss_pred -----CchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 238 -----EPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 238 -----~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
..+.+.++|.++++|++|+||+|++++|.|+++++|
T Consensus 239 ~~~~~~~~~l~~ia~~~g~s~aqvaL~w~l~~~~v~~~I~g 279 (312)
T 1pyf_A 239 KENIRKVNKLAPIAEKHNVDIPHIVLAWYLARPEIDILIPG 279 (312)
T ss_dssp HHHHHHHHTTHHHHHHTTSCHHHHHHHHHHHSTTCCCBCCC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCeEEEeC
Confidence 123467899999999999999999999999999987
No 3
>3n2t_A Putative oxidoreductase; aldo/keto reductase superfamily, AKR, AKR11B4, TIM barrel; 2.00A {Gluconobacter oxydans} SCOP: c.1.7.0
Probab=100.00 E-value=1.2e-63 Score=445.94 Aligned_cols=267 Identities=26% Similarity=0.432 Sum_probs=230.9
Q ss_pred cccCCCcccCCCCCcccCcceeccccCCCC-CCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCC
Q 024050 4 EKHQVPRVKLGTQGLEVSKLGYGCMNLSGG-YSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPR 82 (273)
Q Consensus 4 ~~~~m~~r~lg~sg~~vs~lglG~~~~~~~-~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r 82 (273)
.+|+|+||+||+||++||+||||||++++. |+. .+.+++.++|++|+++|||+||||+.||.|.||+.+|++|+. +|
T Consensus 15 ~~m~M~~~~lg~tg~~vs~lglGt~~~g~~~~g~-~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~-~R 92 (348)
T 3n2t_A 15 SHMASDTIRIPGIDTPLSRVALGTWAIGGWMWGG-PDDDNGVRTIHAALDEGINLIDTAPVYGFGHSEEIVGRALAE-KP 92 (348)
T ss_dssp --CTTSEECCTTCSSCEESEEEECTTSSCSSSCS-TTHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHHH-SC
T ss_pred CCCCceeeecCCCCCccCCEeEeCccccCCCCCC-CCHHHHHHHHHHHHHcCCCEEEChhhcCCChHHHHHHHHHhh-CC
Confidence 467899999999999999999999999853 443 488999999999999999999999999999999999999995 89
Q ss_pred CCEEEEeccCcCCC-CCc---cccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccE
Q 024050 83 EKIQVATKFGIAGI-GVA---GVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY 158 (273)
Q Consensus 83 ~~~~i~tK~~~~~~-~~~---~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~ 158 (273)
+++||+||++.... ..+ ....+.+++.+++++++||+|||+||||+|++|||+...+++++|++|++|+++||||+
T Consensus 93 ~~v~I~TK~g~~~~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~ 172 (348)
T 3n2t_A 93 NKAHVATKLGLHWVGEDEKNMKVFRDSRPARIRKEVEDSLRRLRVETIDLEQIHWPDDKTPIDESARELQKLHQDGKIRA 172 (348)
T ss_dssp CCCEEEEEECEEEESSSTTTCEEEECCCHHHHHHHHHHHHHHHTCSSEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEE
T ss_pred CeEEEEEeecCCCcCCCcccccccCCCCHHHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCHHHHHHHHHHHHHhCcceE
Confidence 99999999965321 111 22345789999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHHhhcCCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCC-CCCchhhhh--
Q 024050 159 IGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVEN-VPADSFLVQ-- 235 (273)
Q Consensus 159 iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~-~~~~~~~~~-- 235 (273)
||||||++++++++++..+++++|++||++++..+.+++++|+++||+|++|+||++|+|++++.... ++..+....
T Consensus 173 iGvSn~~~~~l~~~~~~~~~~~~Q~~~nl~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~~~~~~~~~~~r~~~~ 252 (348)
T 3n2t_A 173 LGVSNFSPEQMDIFREVAPLATIQPPLNLFERTIEKDILPYAEKHNAVVLAYGALCRGLLTGKMNRDTTFPKDDLRSNDP 252 (348)
T ss_dssp EEEESCCHHHHHHHHHHSCCCEEECBCBTTBCGGGGTHHHHHHHHTCEEEEBCTTGGGGGGTCCCTTCCCCTTSGGGGCG
T ss_pred EecCCCCHHHHHHHHHhCCccEEEeeecCccCchHHHHHHHHHHcCCeEEEeecccCccccCCccCCCCCCCcchhhccc
Confidence 99999999999999999999999999999999877899999999999999999999999999854432 232222111
Q ss_pred ccC----------chhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 236 RRE----------PGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 236 ~~~----------~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.+. .+.+.++|.++|+|++|+||+|++++ .|+++++|
T Consensus 253 ~~~~~~~~~~~~~~~~l~~iA~~~g~t~aqvaL~w~l~~-~v~~~I~g 299 (348)
T 3n2t_A 253 KFQKPNFEKYLAAMDEFEKLAEKRGKSVMAFAVRWVLDQ-GPVIALWG 299 (348)
T ss_dssp GGSTTHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHTT-TTEEEEEE
T ss_pred ccchhhHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHC-CCcEEEeC
Confidence 111 13567899999999999999999999 88888775
No 4
>3eau_A Voltage-gated potassium channel subunit beta-2; kvbeta, cortisone, NADPH, cytoplasm, ION transport, ionic channel, NADP, phosphoprotein; HET: NDP PDN; 1.82A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2r9r_A* 2a79_A* 3lnm_A* 1exb_A* 3eb4_A* 3eb3_A* 1qrq_A* 1zsx_A*
Probab=100.00 E-value=5.8e-63 Score=438.33 Aligned_cols=262 Identities=27% Similarity=0.409 Sum_probs=226.0
Q ss_pred cCCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--CCCC
Q 024050 6 HQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPRE 83 (273)
Q Consensus 6 ~~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~~r~ 83 (273)
|.|.||+||+||++||+||||||.. +|...+.+++.++|++|+++|||+||||+.||+|.||+.+|++|++ .+|+
T Consensus 1 ~~m~yr~lG~tg~~vs~iglGt~~~---~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~ 77 (327)
T 3eau_A 1 MLQFYRNLGKSGLRVSCLGLGTWVT---FGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRS 77 (327)
T ss_dssp CCCSEEESTTSSCEEESEEEECTTC---CCCCSCHHHHHHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHHTCCGG
T ss_pred CcchhcccCCCCCcccceeecCccc---cCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCChHHHHHHHHHhcCCccC
Confidence 6799999999999999999999842 4445689999999999999999999999999999999999999987 5799
Q ss_pred CEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCC
Q 024050 84 KIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE 163 (273)
Q Consensus 84 ~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~ 163 (273)
++||+||+++... .....+.+++.+++++++||+|||+||||+|++|||+...+++++|++|++|+++||||+|||||
T Consensus 78 ~v~I~TK~~~~~~--~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn 155 (327)
T 3eau_A 78 SLVITTKIFWGGK--AETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSR 155 (327)
T ss_dssp GCEEEEEESBCCS--SGGGBSSSHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEES
T ss_pred eEEEEEeecCCCC--CCCCCCCCHHHHHHHHHHHHHHhCCCccceEEEeCCCCCCCHHHHHHHHHHHHHcCCeeEEeecC
Confidence 9999999864321 12234578999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHhhc------CCceEEeeecccccccc-cccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhh-
Q 024050 164 ASPGTIRRAHAV------HPITAVQMEWSLWTRDI-EEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQ- 235 (273)
Q Consensus 164 ~~~~~l~~~~~~------~~~~~~q~~~~l~~~~~-~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~- 235 (273)
|++++++++... .+++++|++||++++.. +.+++++|+++||++++|+||++|+|++++... .|...+...
T Consensus 156 ~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~~~-~~~~~~~~~~ 234 (327)
T 3eau_A 156 WSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSG-IPPYSRASLK 234 (327)
T ss_dssp CCHHHHHHHHHHHHHTTCCCCCEEEEECBTTBCHHHHHHHHHHHHHHCCEEEEECTTGGGGGGTTTTTS-CCTTSGGGST
T ss_pred CCHHHHHHHHHHHHHcCCCCceeecccccccccchhHhhHHHHHHHcCCeEEEeccccCceecCcccCC-CCCCcccccc
Confidence 999999888653 58999999999999873 467999999999999999999999999986543 232221110
Q ss_pred -------c----------cCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 236 -------R----------REPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 236 -------~----------~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
+ ...+.+.++|.++|+|++|+||+|++++|.|+++++|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aqvaL~w~l~~~~v~~vI~g 289 (327)
T 3eau_A 235 GYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLG 289 (327)
T ss_dssp TCHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHSSTTCCEEEEC
T ss_pred cccccccccccchhHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHhCCCCceEEeC
Confidence 0 0124567899999999999999999999999998887
No 5
>1pz1_A GSP69, general stress protein 69; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; HET: NAP; 2.20A {Bacillus subtilis} SCOP: c.1.7.1
Probab=100.00 E-value=1.3e-62 Score=436.70 Aligned_cols=264 Identities=30% Similarity=0.479 Sum_probs=228.4
Q ss_pred CCcccCCCCCcccCcceeccccCCCC-CCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc-CCCCCE
Q 024050 8 VPRVKLGTQGLEVSKLGYGCMNLSGG-YSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ-LPREKI 85 (273)
Q Consensus 8 m~~r~lg~sg~~vs~lglG~~~~~~~-~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~-~~r~~~ 85 (273)
|+||+||+||++||+||||||+++.. || ..+++++.++|++|+++|||+||||+.||.|.||+.+|++|++ .+|+++
T Consensus 1 M~~~~lg~tg~~vs~lglGt~~~g~~~~g-~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~R~~~ 79 (333)
T 1pz1_A 1 MEYTSIADTGIEASRIGLGTWAIGGTMWG-GTDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEYMKRDQV 79 (333)
T ss_dssp CCEEECTTSSCEEESEEEECTGGGCTTTT-CCCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHHHHTCGGGC
T ss_pred CCceecCCCCCcccCEeEechhhcCCcCC-CCCHHHHHHHHHHHHHcCCCeEECccccCCCchHHHHHHHHhcCCCcCeE
Confidence 78999999999999999999999863 55 3588999999999999999999999999999999999999986 379999
Q ss_pred EEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCCC
Q 024050 86 QVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEAS 165 (273)
Q Consensus 86 ~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~ 165 (273)
+|+||++...+. +.+..+.+++.+++++++||+|||+||||+|++|+|+...+.+++|++|++|+++||||+||||||+
T Consensus 80 ~i~TK~~~~~~~-~~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~ 158 (333)
T 1pz1_A 80 ILATKTALDWKN-NQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWPDPLVPIEETAEVMKELYDAGKIRAIGVSNFS 158 (333)
T ss_dssp EEEEEECEEESS-SCEEECCCHHHHHHHHHHHHHHTTSSCBSEEEECSCCTTSCHHHHHHHHHHHHHTTSBSCEEECSCC
T ss_pred EEEEeeCccCCC-CCCCCCCCHHHHHHHHHHHHHHhCCCceeEEEecCCCCCCCHHHHHHHHHHHHHCCcCCEEEecCCC
Confidence 999999721110 1111246899999999999999999999999999999888999999999999999999999999999
Q ss_pred HHHHHHHhhcCCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCC-CCCCchhhhh--ccCc---
Q 024050 166 PGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVE-NVPADSFLVQ--RREP--- 239 (273)
Q Consensus 166 ~~~l~~~~~~~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~-~~~~~~~~~~--~~~~--- 239 (273)
+++++++++..+++++|++||+++++.+.+++++|+++||+|++|+||++|+|++++... .+++.+.... .+..
T Consensus 159 ~~~l~~~~~~~~~~~~Q~~~nl~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~~~~~~~~~~~r~~~~~~~~~~~ 238 (333)
T 1pz1_A 159 IEQMDTFRAVAPLHTIQPPYNLFEREMEESVLPYAKDNKITTLLYGSLCRGLLTGKMTEEYTFEGDDLRNHDPKFQKPRF 238 (333)
T ss_dssp HHHHHHHHTTSCCCEECCBCBTTBCGGGGTHHHHHHHTTCEEEEBCTTGGGTTSSCCCTTCCCCTTCGGGSCGGGSTTTH
T ss_pred HHHHHHHHhcCCcEEEeccccCccCchHHHHHHHHHHcCceEEEeecccCCccCCCccccccCCCccccccccccchhhH
Confidence 999999999999999999999999987788999999999999999999999999985432 2222221110 1111
Q ss_pred -------hhHHHHHHhcCC-ChHHHHHHhhhcCCCcccccCC
Q 024050 240 -------GQEQEYLFSHRE-PCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 240 -------~~~~~~~~~~~~-~~~q~aL~~~l~~p~v~s~~~g 273 (273)
+.+.++|.++|+ |++|+||+|++++|.|+++++|
T Consensus 239 ~~~~~~~~~l~~ia~~~g~~s~aqvaL~w~l~~~~v~~vI~g 280 (333)
T 1pz1_A 239 KEYLSAVNQLDKLAKTRYGKSVIHLAVRWILDQPGADIALWG 280 (333)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHTSTTCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHhCCCCeEEEeC
Confidence 456789999999 9999999999999999988876
No 6
>3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A {Escherichia coli} SCOP: c.1.7.0 PDB: 4ast_A 4aub_A*
Probab=100.00 E-value=5.1e-62 Score=435.30 Aligned_cols=268 Identities=25% Similarity=0.441 Sum_probs=223.6
Q ss_pred Cccccc--CCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCC--CcHHHHHHHH
Q 024050 1 MAEEKH--QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ--NANEVLLGKA 76 (273)
Q Consensus 1 m~~~~~--~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~--g~se~~lg~~ 76 (273)
|++.+. .|+||+||+||++||.||||||.. +|...+.+++.++|++|+++|||+||||+.||+ |.||+.+|++
T Consensus 4 ~~~~~~~~~M~~r~lg~tg~~vs~lglGt~~~---~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~a 80 (346)
T 3n6q_A 4 LANPERYGQMQYRYCGKSGLRLPALSLGLWHN---FGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRL 80 (346)
T ss_dssp CCCTTTTSSCCEEECTTSSCEEESEEEECSSS---CSTTSCHHHHHHHHHHHHHTTCCEEECCTTCTTTTTHHHHHHHHH
T ss_pred ccCCCcccCceeEecCCCCCeecCeeecCccc---cCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCCCcHHHHHHHH
Confidence 444444 499999999999999999999853 344557899999999999999999999999997 8999999999
Q ss_pred Hhc--C-CCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHc
Q 024050 77 LKQ--L-PREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEE 153 (273)
Q Consensus 77 l~~--~-~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~ 153 (273)
|++ . .|+++||+||++..... +......+++.+++++++||+|||+||||+|++|+|+...+++++|++|++|+++
T Consensus 81 l~~~~~~~R~~~~I~TK~g~~~~~-~~~~~~~s~~~i~~~~e~SL~rL~~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~ 159 (346)
T 3n6q_A 81 LREDFAAYRDELIISTKAGYDMWP-GPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQS 159 (346)
T ss_dssp HHHHCTTTGGGCEEEEEECSCCSS-STTSSSSCHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHT
T ss_pred HHhhcccccccEEEEEEecccCCC-CCCCCCCCHHHHHHHHHHHHHHhCCCcEeEEEEeCCCCCCCHHHHHHHHHHHHHc
Confidence 986 3 49999999998754321 1111234799999999999999999999999999999999999999999999999
Q ss_pred CCccEEecCCCCHHHHHHHhhc-----CCceEEeeecccccccccc-cHHHHHHHhCCeEEecccCCCccCCCCCCCCCC
Q 024050 154 GKIKYIGLSEASPGTIRRAHAV-----HPITAVQMEWSLWTRDIEE-EIIPLCRELGIGIVPYSPLGRGFFGGKAVVENV 227 (273)
Q Consensus 154 G~ir~iGvS~~~~~~l~~~~~~-----~~~~~~q~~~~l~~~~~~~-~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~ 227 (273)
||||+||||||++++++++++. .+++++|++||++++..+. +++++|+++||+|++|+||++|+|++++..+ .
T Consensus 160 Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~Q~~~~l~~~~~~~~~l~~~~~~~gi~v~a~spL~~G~L~g~~~~~-~ 238 (346)
T 3n6q_A 160 GKALYVGISSYSPERTQKMVELLREWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGKYLNG-I 238 (346)
T ss_dssp TSEEEEEEESCCHHHHHHHHHHHHTTTCCCCEEECBCBTTBCHHHHTTHHHHHHHHTCEEEEBSTTGGGGGGTSCC----
T ss_pred CCeeEEEeCCCCHHHHHHHHHHHHHcCCCeEEEeccCchhhcCcchhhHHHHHHHcCCeEEEeccccCeecCCCccCC-C
Confidence 9999999999999999987654 5789999999999998765 8999999999999999999999999985432 2
Q ss_pred CCchhhh----------hccC-------chhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 228 PADSFLV----------QRRE-------PGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 228 ~~~~~~~----------~~~~-------~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
|.+.+.. .... .+.+.++|.++|+|++|+||+|++++|.|+++++|
T Consensus 239 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iA~~~g~t~aqvaL~w~l~~~~v~~~I~g 301 (346)
T 3n6q_A 239 PQDSRMHREGNKVRGLTPKMLTEANLNSLRLLNEMAQQRGQSMAQMALSWLLKDDRVTSVLIG 301 (346)
T ss_dssp --------------------CCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSSTTCSEEEEC
T ss_pred CCccccccccccccccchhhhhHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHhCCCCcEEEcC
Confidence 2221110 0000 12567899999999999999999999999999887
No 7
>3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp}
Probab=100.00 E-value=1.3e-61 Score=433.55 Aligned_cols=262 Identities=25% Similarity=0.454 Sum_probs=222.3
Q ss_pred CCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCC--CcHHHHHHHHHhc-C--C
Q 024050 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQ--NANEVLLGKALKQ-L--P 81 (273)
Q Consensus 7 ~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~--g~se~~lg~~l~~-~--~ 81 (273)
.|+||+||+||++||+||||||.. +|...+.+++.++|++|++.|||+||||+.||+ |.||+.+|++|++ . .
T Consensus 33 ~M~~r~lg~tg~~vs~lglGt~~~---~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~al~~~~~~~ 109 (353)
T 3erp_A 33 TMEYRRCGRSGVKLPAISLGLWHN---FGDTTRVENSRALLQRAFDLGITHFDLANNYGPPPGSAECNFGRILQEDFLPW 109 (353)
T ss_dssp SCCEEECSSSSCEEESEEEECSSS---CSTTSCHHHHHHHHHHHHHTTCCEEECCTTCTTTTTHHHHHHHHHHHHHTGGG
T ss_pred cceeeecCCCCCccCCeeecChhh---cCCCCCHHHHHHHHHHHHHcCCCEEEChhhhCCCCChHHHHHHHHHHhhccCC
Confidence 499999999999999999999932 333468999999999999999999999999998 9999999999985 3 3
Q ss_pred CCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec
Q 024050 82 REKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL 161 (273)
Q Consensus 82 r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv 161 (273)
|+++||+||++..... +......+++.+++++++||+|||+||||+|++|+|+...+++++|++|++|+++||||+|||
T Consensus 110 R~~v~I~TK~g~~~~~-~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~aL~~l~~~Gkir~iGv 188 (353)
T 3erp_A 110 RDELIISTKAGYTMWD-GPYGDWGSRKYLIASLDQSLKRMGLEYVDIFYHHRPDPETPLKETMKALDHLVRHGKALYVGI 188 (353)
T ss_dssp GGGCEEEEEESSCCSS-STTSSTTCHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEEEEE
T ss_pred CCeEEEEeeeccCCCC-CcccCCCCHHHHHHHHHHHHHHhCCCeEeEEEecCCCCCCCHHHHHHHHHHHHHCCCccEEEe
Confidence 9999999999754211 111123479999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHhhc-----CCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhh--
Q 024050 162 SEASPGTIRRAHAV-----HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLV-- 234 (273)
Q Consensus 162 S~~~~~~l~~~~~~-----~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~-- 234 (273)
|||++++++++++. .+++++|++||++++..+.+++++|+++||+|++|+||++|+|++++..+ .|.+.+..
T Consensus 189 Sn~~~~~l~~~~~~~~~~~~~~~~~Q~~~~~~~~~~e~~ll~~~~~~gI~v~a~spL~~G~Ltg~~~~~-~p~~~r~~~~ 267 (353)
T 3erp_A 189 SNYPADLARQAIDILEDLGTPCLIHQPKYSLFERWVEDGLLALLQEKGVGSIAFSPLAGGQLTDRYLNG-IPEDSRAASG 267 (353)
T ss_dssp ESCCHHHHHHHHHHHHHHTCCEEEEECBCBTTBCGGGGTHHHHHHHHTCEEEEBSTTGGGTSSGGGTC------------
T ss_pred cCCCHHHHHHHHHHHHHcCCCeEEeeccccccccchhhHHHHHHHHcCCeEEEeccccccccCCCccCC-CCCccccccc
Confidence 99999999988764 68999999999999987788999999999999999999999999985433 33322211
Q ss_pred -----hccC-------chhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 235 -----QRRE-------PGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 235 -----~~~~-------~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.... .+.+.++|.++++|++|+||+|++++|.|+++++|
T Consensus 268 ~~~~~~~~~~~~~~~~~~~l~~iA~~~g~t~aqvaL~w~l~~~~v~~vI~G 318 (353)
T 3erp_A 268 SRFLKPEQITADKLEKVRRLNELAARRGQKLSQMALAWVLRNDNVTSVLIG 318 (353)
T ss_dssp --------CCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTTSCCCEEEEC
T ss_pred ccccccccccHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCcEEEeC
Confidence 0000 12577899999999999999999999999999887
No 8
>3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating, potassium channel, KV1.2, gating charges, no analysis, ION transport; HET: NAP; 2.90A {Rattus norvegicus}
Probab=100.00 E-value=3.4e-61 Score=432.94 Aligned_cols=260 Identities=28% Similarity=0.420 Sum_probs=224.0
Q ss_pred CCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--CCCCC
Q 024050 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREK 84 (273)
Q Consensus 7 ~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~~r~~ 84 (273)
.| ||+||+||++||+||||||.. +|...+.+++.++|++|+++|||+||||+.||.|.||+.+|++|++ .+|++
T Consensus 37 ~m-yr~lG~tg~~vs~iglGt~~~---~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~~ 112 (367)
T 3lut_A 37 QF-YRNLGKSGLRVSCLGLGTWVT---FGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSS 112 (367)
T ss_dssp CS-EEESTTSSCEEESEEEECTTC---CCCCSCHHHHHHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHHTCCGGG
T ss_pred hc-eeecCCCCCcccceeECCccc---cCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHHHhCCCCCce
Confidence 48 999999999999999999842 3445688999999999999999999999999999999999999987 57999
Q ss_pred EEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCC
Q 024050 85 IQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEA 164 (273)
Q Consensus 85 ~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~ 164 (273)
+||+||+++... .....+.+++.+++++++||+|||+||||+|++|||+...+++++|++|++|+++||||+||||||
T Consensus 113 v~I~TK~~~~~~--~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~pd~~~~~~e~~~al~~l~~~Gkir~iGvSn~ 190 (367)
T 3lut_A 113 LVITTKIFWGGK--AETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRW 190 (367)
T ss_dssp CEEEEEESBCCS--SGGGBSSCHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESC
T ss_pred EEEEeccccCCC--CccCCCCCHHHHHHHHHHHHHHhCCCccceEEecCCCCCCCHHHHHHHHHHHHHcCCeeEEEecCC
Confidence 999999865431 122345789999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHhhc------CCceEEeeecccccccc-cccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhh---
Q 024050 165 SPGTIRRAHAV------HPITAVQMEWSLWTRDI-EEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLV--- 234 (273)
Q Consensus 165 ~~~~l~~~~~~------~~~~~~q~~~~l~~~~~-~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~--- 234 (273)
+++++++++.. .+|+++|++||+++++. +.+++++|+++||+|++|+||++|+|+|++.... |...+..
T Consensus 191 ~~~~l~~~~~~~~~~~~~~~~~~Q~~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltgk~~~~~-~~~~r~~~~~ 269 (367)
T 3lut_A 191 SSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSGI-PPYSRASLKG 269 (367)
T ss_dssp CHHHHHHHHHHHHHHTCCCCCEEEEECBTTBCHHHHTHHHHHHHHHCCEEEEECTTGGGGGGTTTTTSC-CTTSGGGSTT
T ss_pred CHHHHHHHHHHHHHcCCCCceeeeccccceecchhHhHHHHHHHHcCCeEEEecccccccccCCcCCCC-CCcccccccc
Confidence 99999887653 58999999999999975 4589999999999999999999999999865332 2221110
Q ss_pred -----hcc----------CchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 235 -----QRR----------EPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 235 -----~~~----------~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.+. ..+.+.++|.++|+|++|+||+|++++|.|+++++|
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~l~~iA~~~g~t~aqvaL~w~l~~~~v~~vI~g 323 (367)
T 3lut_A 270 YQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLG 323 (367)
T ss_dssp CHHHHHHHTSHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHTSTTEEEEEEC
T ss_pred cccccccccchhhHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCCCcEEecC
Confidence 000 123567899999999999999999999999998887
No 9
>1ynp_A Oxidoreductase, AKR11C1; aldo-keto reductase, NADPH; HET: SUC; 1.25A {Bacillus halodurans} PDB: 1ynq_A*
Probab=100.00 E-value=2.5e-61 Score=425.58 Aligned_cols=257 Identities=31% Similarity=0.535 Sum_probs=213.3
Q ss_pred cccCCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCC
Q 024050 4 EKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPRE 83 (273)
Q Consensus 4 ~~~~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~ 83 (273)
....|+||+||++|++||+||||||+++. +.+++.++|++|++.|||+||||+.||.|.||+.+|++|+. +|+
T Consensus 17 ~~~~M~~r~lg~tg~~vs~lglGt~~~g~------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~-~R~ 89 (317)
T 1ynp_A 17 RGSHMKKRQLGTSDLHVSELGFGCMSLGT------DETKARRIMDEVLELGINYLDTADLYNQGLNEQFVGKALKG-RRQ 89 (317)
T ss_dssp ---CCCEEECTTSSCEEESBCBCSCCCCS------CHHHHHHHHHHHHHTTCCEEECSCBTTBCCCHHHHHHHHTT-CGG
T ss_pred ccCCcceeecCCCCCcccCEeEcCcccCC------CHHHHHHHHHHHHHcCCCeEECccccCCCchHHHHHHHHhc-CCC
Confidence 34569999999999999999999999864 56899999999999999999999999999999999999995 899
Q ss_pred CEEEEeccCcCCCCC-ccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecC
Q 024050 84 KIQVATKFGIAGIGV-AGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS 162 (273)
Q Consensus 84 ~~~i~tK~~~~~~~~-~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS 162 (273)
++||+||++...... ..+..+.+++.+++++++||+|||+||||+|++|||+...+.+++|++|++|+++||||+||||
T Consensus 90 ~v~I~TK~~~~~~~~~~~~~~~~~~~~v~~~~e~SL~rL~~dyiDl~llH~p~~~~~~~e~~~al~~l~~~Gkir~iGvS 169 (317)
T 1ynp_A 90 DIILATKVGNRFEQGKEGWWWDPSKAYIKEAVKDSLRRLQTDYIDLYQLHGGTIDDPIDETIEAFEELKQEGVIRYYGIS 169 (317)
T ss_dssp GCEEEEEC---------------CHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHHTSEEEEEEE
T ss_pred eEEEEeeeCCCcCCCCccccCCCCHHHHHHHHHHHHHHHCCCcEeEEEecCCCCCCChHHHHHHHHHHHhCCceEEEEec
Confidence 999999997643211 0112356899999999999999999999999999999888899999999999999999999999
Q ss_pred CCCHHHHHHHhhcCCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhh--ccCch
Q 024050 163 EASPGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQ--RREPG 240 (273)
Q Consensus 163 ~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~--~~~~~ 240 (273)
||++++++++++..+++++|++||++++..+. ++++|+++||+|++|+||++|+|+++ .++ +...+... ....+
T Consensus 170 n~~~~~l~~~~~~~~~~~~Q~~~nl~~~~~e~-l~~~~~~~gI~v~a~spL~~G~L~~~-~~~--~~~~~~~~~~~~~~~ 245 (317)
T 1ynp_A 170 SIRPNVIKEYLKRSNIVSIMMQYSILDRRPEE-WFPLIQEHGVSVVVRGPVARGLLSRR-PLP--EGEGYLNYRYDELKL 245 (317)
T ss_dssp CCCHHHHHHHHHHSCCCEEEEECBTTBCGGGG-GHHHHHHTTCEEEEECTTGGGTTSSS-CCC--TTCCBTTBCHHHHHH
T ss_pred CCCHHHHHHHHhcCCCEEEeccCCchhCCHHH-HHHHHHHcCCeEEEecCccCcccCCC-CCc--cccccccccHHHHHH
Confidence 99999999999988899999999999998654 99999999999999999999999986 211 00000000 00012
Q ss_pred hHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 241 QEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 241 ~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.+.+++. |+|++|+||+|++++|.|.++++|
T Consensus 246 ~l~~ia~--g~s~aqvaL~w~l~~~~v~~vI~g 276 (317)
T 1ynp_A 246 LRESLPT--DRPLHELALQYCLAHDVVATVAAG 276 (317)
T ss_dssp HHHHSCS--SSCHHHHHHHHHHTSTTEEEEECC
T ss_pred HHHHHHc--CCCHHHHHHHHHHhCCCCeEEEeC
Confidence 3455555 899999999999999999999887
No 10
>1lqa_A TAS protein; TIM barrel, structure 2 function project, S2F, structural GE oxidoreductase; HET: NDP; 1.60A {Escherichia coli} SCOP: c.1.7.1
Probab=100.00 E-value=4.3e-60 Score=423.00 Aligned_cols=262 Identities=27% Similarity=0.365 Sum_probs=220.5
Q ss_pred CCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCC-------CCcHHHHHHHHHhc-
Q 024050 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYG-------QNANEVLLGKALKQ- 79 (273)
Q Consensus 8 m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg-------~g~se~~lg~~l~~- 79 (273)
|+||+||++|++||+||||||+||. ..+.+++.++|++|+++|||+||||+.|| .|.||+.+|++|++
T Consensus 1 M~~~~lg~tg~~vs~lglGt~~~g~----~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~~~~~~G~sE~~lG~al~~~ 76 (346)
T 1lqa_A 1 MQYHRIPHSSLEVSTLGLGTMTFGE----QNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKH 76 (346)
T ss_dssp CCEEECTTSSCEEESEEEECTTBTT----TBCHHHHHHHHHHHHHTTCCEEECCTTCSSSCCTTTTTHHHHHHHHHHHHH
T ss_pred CCeeecCCCCCeecCeeEEccccCC----CCCHHHHHHHHHHHHHcCCCEEEChhhcCCCccCCCCCccHHHHHHHHhhc
Confidence 7899999999999999999998763 34789999999999999999999999996 68999999999986
Q ss_pred CCCCCEEEEeccCcCCCCCccc---cccCCHHHHHHHHHHHHHHcCCCcccEEEecCCC---------------C--CCC
Q 024050 80 LPREKIQVATKFGIAGIGVAGV---IVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVD---------------T--SVP 139 (273)
Q Consensus 80 ~~r~~~~i~tK~~~~~~~~~~~---~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~---------------~--~~~ 139 (273)
.+|+++||+||++........+ ..+.+++.+++++++||+|||+||||+|++|||+ . ..+
T Consensus 77 ~~R~~~~i~TK~~~~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~d~~~~~~ 156 (346)
T 1lqa_A 77 GSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVS 156 (346)
T ss_dssp CCGGGCEEEEEECCSCCTTCCCSSTTCCSSHHHHHHHHHHHHHHHTSSCEEEEEECSCSSCCSCTTCCSCCCCSSCCSSC
T ss_pred CCCceEEEEEeECCCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCceeEEEecCccccccccccccccccccccCCC
Confidence 4799999999997531100001 1246899999999999999999999999999993 3 457
Q ss_pred HHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhc------CCceEEeeecccccccccccHHHHHHHhCCeEEecccC
Q 024050 140 IEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV------HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPL 213 (273)
Q Consensus 140 ~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~------~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl 213 (273)
++++|++|++|+++||||+||||||++++++++++. .+++++|++||++++..+.+++++|+++||+|++|+||
T Consensus 157 ~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spL 236 (346)
T 1lqa_A 157 LLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCL 236 (346)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCCCEEEEECBTTBCTHHHHHHHHHHHHCCEEEEECTT
T ss_pred HHHHHHHHHHHHHcCCeEEEEecCCCHHHHHHHHHHHHHcCCCCceEEeccCChhhchhHHHHHHHHHHcCCeEEEecch
Confidence 899999999999999999999999999888776542 47999999999999987788999999999999999999
Q ss_pred CCccCCCCCCCCCCCCchhhhh-----ccC-------chhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 214 GRGFFGGKAVVENVPADSFLVQ-----RRE-------PGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 214 ~~G~L~~~~~~~~~~~~~~~~~-----~~~-------~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
++|+|++++.....|.+.+... +.. .+.+.++|.++|+|++|+||+|++++|.|+++++|
T Consensus 237 ~~G~L~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aqvaL~w~l~~~~v~~~I~g 308 (346)
T 1lqa_A 237 GFGTLTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAAYVDIARRHGLDPAQMALAFVRRQPFVASTLLG 308 (346)
T ss_dssp GGGGGGTTTGGGCCCTTCHHHHCTTCCTTCSHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHTCTTEEEEEEC
T ss_pred hhhhhcCccccccCCCcchhhcchhhcccccHHHHHHHHHHHHHHHHHCcCHHHHHHHHHHhCCCCeEEEeC
Confidence 9999999854433443332110 011 12567899999999999999999999999998887
No 11
>1ur3_M Hypothetical oxidoreductase YDHF; NADP binding, aldo-keto reductase; 2.57A {Escherichia coli} SCOP: c.1.7.1 PDB: 1og6_A*
Probab=100.00 E-value=1.3e-59 Score=414.88 Aligned_cols=252 Identities=24% Similarity=0.285 Sum_probs=221.5
Q ss_pred CCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--CCCCCE
Q 024050 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKI 85 (273)
Q Consensus 8 m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~~r~~~ 85 (273)
|++++||+++++||+||||||++|. | ..+++++.++|++|+++|||+||||+.||.|.||+.+|++|++ .+|+++
T Consensus 23 M~~~~Lg~~~~~vs~lglGt~~~g~-~--~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~~v 99 (319)
T 1ur3_M 23 VQRITIAPQGPEFSRFVMGYWRLMD-W--NMSARQLVSFIEEHLDLGVTTVDHADIYGGYQCEAAFGEALKLAPHLRERM 99 (319)
T ss_dssp CCEEECSTTCCEEESSEEECTTTTT-T--TCCHHHHHHHHHHHHHHTCCEEECCSSTTTTTHHHHHHHHHHHCGGGTTTC
T ss_pred CceEECCCCCcccccccEeccccCC-C--CCCHHHHHHHHHHHHHcCCCeEEcccccCCCcHHHHHHHHHHhCCCCCCeE
Confidence 8999999999999999999999986 4 3478999999999999999999999999999999999999986 469999
Q ss_pred EEEeccCcCCCCC---ccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecC
Q 024050 86 QVATKFGIAGIGV---AGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS 162 (273)
Q Consensus 86 ~i~tK~~~~~~~~---~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS 162 (273)
||+||++...+.. .....+.+++.+++++++||+|||+||||+|++|||+...+.+++|++|++|+++||||+||||
T Consensus 100 ~I~TK~~~~~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvS 179 (319)
T 1ur3_M 100 EIVSKCGIATTAREENVIGHYITDRDHIIKSAEQSLINLATDHLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGVS 179 (319)
T ss_dssp EEEEEECEECTTSTTCSSCEECCCHHHHHHHHHHHHHHHTCSCBSEEEECSCCTTCCHHHHHHHHHHHHHTTSBCCEEEE
T ss_pred EEEEeeccCCCCCcccccccCCCCHHHHHHHHHHHHHHhCCCCeeEEEecCCCCCCCHHHHHHHHHHHHHCCCccEEEec
Confidence 9999998643210 0112357899999999999999999999999999999888899999999999999999999999
Q ss_pred CCCHHHHHHHhhcC--CceEEeeecccccccc-cccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhhccCc
Q 024050 163 EASPGTIRRAHAVH--PITAVQMEWSLWTRDI-EEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRREP 239 (273)
Q Consensus 163 ~~~~~~l~~~~~~~--~~~~~q~~~~l~~~~~-~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~~~~~ 239 (273)
||++++++++.+.. +++++|++||++++.. +.+++++|+++||++++|+||++|.|.+. +.. ....
T Consensus 180 n~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~~~~ll~~~~~~gi~v~a~spL~~G~L~~~------~~~-----~~~~ 248 (319)
T 1ur3_M 180 NFTPAQFALLQSRLPFTLATNQVEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGGGRLFND------DYF-----QPLR 248 (319)
T ss_dssp SCCHHHHHHHHTTCSSCCCCEEEECBTTBCGGGTSSHHHHHHHHTCCCEEECCCTTTCSSSC------GGG-----HHHH
T ss_pred CCCHHHHHHHHHhcCCCcEEEEccCchhhCchhhHHHHHHHHHcCCeEEEeccccCccccCC------chh-----HHHH
Confidence 99999999988764 7899999999999985 47799999999999999999999988641 110 0113
Q ss_pred hhHHHHHHhcCCCh-HHHHHHhhhcCCCcccccCC
Q 024050 240 GQEQEYLFSHREPC-QKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 240 ~~~~~~~~~~~~~~-~q~aL~~~l~~p~v~s~~~g 273 (273)
+.+.++|.++++++ +|+||+|++++|.+.++++|
T Consensus 249 ~~l~~ia~~~g~t~~aqvaL~w~l~~~~~~~~I~G 283 (319)
T 1ur3_M 249 DELAVVAEELNAGSIEQVVNAWVLRLPSQPLPIIG 283 (319)
T ss_dssp HHHHHHHHHTTCSCHHHHHHHHHHTSTTCCEEEEC
T ss_pred HHHHHHHHHcCCChHHHHHHHHHHhCCCCeEEEeC
Confidence 45778999999999 99999999999999999887
No 12
>4exb_A Putative uncharacterized protein; aldo-keto reductase, NADP+ binding, oxidoreducta; 2.75A {Pseudomonas aeruginosa} PDB: 4exa_A
Probab=100.00 E-value=1.7e-59 Score=409.08 Aligned_cols=238 Identities=24% Similarity=0.299 Sum_probs=204.2
Q ss_pred CcccccCCCcccCCCCCcccCcceeccccCCCC--------CCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHH
Q 024050 1 MAEEKHQVPRVKLGTQGLEVSKLGYGCMNLSGG--------YSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVL 72 (273)
Q Consensus 1 m~~~~~~m~~r~lg~sg~~vs~lglG~~~~~~~--------~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~ 72 (273)
|+.-...|+||+||++|++||+||||||+++.. |+. .+++++.++|++|++.|||+||||+.|| .||+.
T Consensus 23 ~~~~~~~m~~r~Lg~tg~~vs~lglGt~~~g~~~~~~~~~~~~~-~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg--~sE~~ 99 (292)
T 4exb_A 23 MIRDTLHDLHRPLGDTGLAVSPLGLGTVKFGRDQGVKYPSGFTI-PDDREAADLLALARDLGINLIDTAPAYG--RSEER 99 (292)
T ss_dssp CCCSCSTTCCEECTTSSCEECSEEEECSTTTCC---------CC-CCHHHHHHHHHHHHHTTCCEEECCTTST--THHHH
T ss_pred ccCCCCCceeeecCCCCCccCCEeEcccccCCCcccccccccCC-CCHHHHHHHHHHHHHcCCCEEEcCCccc--hHHHH
Confidence 443445699999999999999999999999862 332 5889999999999999999999999998 79999
Q ss_pred HHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCC--CCCCCHH-HHHHHHHH
Q 024050 73 LGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRV--DTSVPIE-ETIGEMKK 149 (273)
Q Consensus 73 lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~--~~~~~~~-~~~~~L~~ 149 (273)
+|++|+. +|+++||+||++..... +....+.+++.+++++++||+|||+||||+|++|+| +...+.+ ++|++|++
T Consensus 100 lG~al~~-~R~~v~I~TK~~~~~~~-~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~d~~~~~~~e~~~al~~ 177 (292)
T 4exb_A 100 LGPLLRG-QREHWVIVSKVGEEFVD-GQSVFDFSAAHTRRSVERSLKRLETDRIELVLVHSDGNDLDILENSEVYPTLAA 177 (292)
T ss_dssp HHHHHTT-TGGGCEEEEEESBC--C-CSCCBCCCHHHHHHHHHHHHHHTTSSCEEEEEEECCSCHHHHHHHSSHHHHHHH
T ss_pred HHHHhcc-CCCcEEEEEeeccccCC-CCccCCCCHHHHHHHHHHHHHHhCCCceeEEEEecCCCCccccchHHHHHHHHH
Confidence 9999995 89999999999864321 122345789999999999999999999999999999 4434455 89999999
Q ss_pred HHHcCCccEEecCCCCHHHHHHHhhcCCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCC
Q 024050 150 LVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPA 229 (273)
Q Consensus 150 l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~ 229 (273)
|+++||||+||||||++++++++++. ++++|++||+++++. .+++++|+++||+|++|+||++|+|+++
T Consensus 178 l~~~Gkir~iGvSn~~~~~l~~~~~~--~~~~Q~~~~~~~~~~-~~l~~~~~~~gi~v~a~spL~~G~L~~~-------- 246 (292)
T 4exb_A 178 LKREGLIGAYGLSGKTVEGGLRALRE--GDCAMVTYNLNERAE-RPVIEYAAAHAKGILVKKALASGHACLG-------- 246 (292)
T ss_dssp HHHTTSEEEEEEECSSHHHHHHHHHH--SSEEEEECSSSCCTT-HHHHHHHHHTTCEEEEECCSCC--------------
T ss_pred HHHCCCceEEEeCCCCHHHHHHHHHh--hcEEeeccccccCCH-HHHHHHHHHCCcEEEEeccccCCccCCC--------
Confidence 99999999999999999999999887 899999999999976 6899999999999999999999988642
Q ss_pred chhhhhccCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 230 DSFLVQRREPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
++++++|+||+|++++|.|.++++|
T Consensus 247 -------------------~g~t~aqvaL~w~l~~~~v~~vI~g 271 (292)
T 4exb_A 247 -------------------AGQDPVRASFELVFDQPGVAAAIVG 271 (292)
T ss_dssp ---------------------CCHHHHHHHHHHHSTTCCEEEEC
T ss_pred -------------------CCCCHHHHHHHHHHhCCCCeEEEeC
Confidence 6789999999999999999999887
No 13
>3o0k_A Aldo/keto reductase; ssgcid, ALS collaborative crystallography; 1.80A {Brucella melitensis biovar}
Probab=100.00 E-value=2.6e-57 Score=393.47 Aligned_cols=228 Identities=27% Similarity=0.377 Sum_probs=204.7
Q ss_pred ccccCCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--C
Q 024050 3 EEKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--L 80 (273)
Q Consensus 3 ~~~~~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~ 80 (273)
.+.|+|++++| ++|++||.||||||++ +.+++.++|++|++.|||+||||+.|| +|+.+|++|++ .
T Consensus 21 ~~~~~m~~~~L-~~g~~v~~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~ 88 (283)
T 3o0k_A 21 SMIMTVPTVKL-NDGNHIPQLGYGVWQI--------SNDEAVSAVSEALKAGYRHIDTATIYG---NEEGVGKAINGSGI 88 (283)
T ss_dssp CEECCCCEEEC-TTSCEEESBCEECCSC--------CHHHHHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHTSSS
T ss_pred cccCCCceEEC-CCCCEECCeeEECccC--------CHHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHcCC
Confidence 34578999999 8999999999999975 578999999999999999999999999 69999999986 4
Q ss_pred CCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCC-CCHHHHHHHHHHHHHcCCccEE
Q 024050 81 PREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTS-VPIEETIGEMKKLVEEGKIKYI 159 (273)
Q Consensus 81 ~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~-~~~~~~~~~L~~l~~~G~ir~i 159 (273)
+|+++||+||++... .+++.+++++++||+|||+||||+|++|||+.. .+..++|++|++|+++||||+|
T Consensus 89 ~R~~~~i~TK~~~~~---------~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~~e~~~al~~l~~~Gkir~i 159 (283)
T 3o0k_A 89 ARADIFLTTKLWNSD---------QGYESTLKAFDTSLKKLGTDYVDLYLIHWPMPSKDLFMETWRAFIKLKEEGRVKSI 159 (283)
T ss_dssp CGGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTSSCEEEEEECCSCSCHHHHHHHHHHHHHHHHTTSEEEE
T ss_pred CcccEEEEEccCCCC---------CCHHHHHHHHHHHHHHhCCCceeEEEECCCCCCcccHHHHHHHHHHHHHCCCcceE
Confidence 799999999997643 468999999999999999999999999999876 4678999999999999999999
Q ss_pred ecCCCCHHHHHHHhhc--CCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhhcc
Q 024050 160 GLSEASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRR 237 (273)
Q Consensus 160 GvS~~~~~~l~~~~~~--~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~~~ 237 (273)
|||||++++++++++. .++.++|++||++.++ .+++++|+++||++++|+||++|.|..
T Consensus 160 GvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~G~l~~----------------- 220 (283)
T 3o0k_A 160 GVSNFRTADLERLIKESGVTPVLNQIELHPQFQQ--DELRLFHGKHDIATEAWSPLGQGKLLE----------------- 220 (283)
T ss_dssp EEESCCHHHHHHHHHHHSCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCCC-CTT-----------------
T ss_pred EeccCcHHHHHHHHHhCCCCeEEEEeecCcccCc--HHHHHHHHHCCcEEEEecCCCCCcccc-----------------
Confidence 9999999999998875 4678999999999885 679999999999999999999997653
Q ss_pred CchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 238 EPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 238 ~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.+.+.++|.++|+|++|+||+|++++|.| +++|
T Consensus 221 -~~~l~~ia~~~g~t~aqvaL~w~l~~~~v--~I~g 253 (283)
T 3o0k_A 221 -DPTLKSIAEKHAKSVAQIILRWHIETGNI--VIPK 253 (283)
T ss_dssp -CHHHHHHHHHHTSCHHHHHHHHHHHHTCE--ECCC
T ss_pred -chHHHHHHHHhCCCHHHHHHHHHHHCCCE--EEeC
Confidence 13477899999999999999999999987 4555
No 14
>3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A*
Probab=100.00 E-value=1.3e-56 Score=388.31 Aligned_cols=225 Identities=24% Similarity=0.345 Sum_probs=202.8
Q ss_pred cCCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--CCCC
Q 024050 6 HQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPRE 83 (273)
Q Consensus 6 ~~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~~r~ 83 (273)
+.|+|++|| +|++||.||||||+++ +.+++.++|++|+++|||+||||+.|| +|+.+|++|++ .+|+
T Consensus 4 ~~m~~~~L~-~g~~v~~lglGt~~~~-------~~~~~~~~l~~Al~~G~~~~DTA~~Yg---~E~~lG~al~~~~~~R~ 72 (276)
T 3f7j_A 4 SLKDTVKLH-NGVEMPWFGLGVFKVE-------NGNEATESVKAAIKNGYRSIDTAAIYK---NEEGVGIGIKESGVARE 72 (276)
T ss_dssp STTCEEECT-TSCEEESBCEECTTCC-------TTHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHCSCGG
T ss_pred CCcceEECC-CCCEecceeecCCcCC-------CHHHHHHHHHHHHHcCCCEEECcCccc---CHHHHHHHHhhcCCCcc
Confidence 348999996 9999999999999864 468999999999999999999999998 79999999986 5899
Q ss_pred CEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCC
Q 024050 84 KIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE 163 (273)
Q Consensus 84 ~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~ 163 (273)
++||+||+++.. .+++.+++++++||+|||+||||+|++|||+... ..++|++|++|+++||||+|||||
T Consensus 73 ~~~i~TK~~~~~---------~~~~~v~~~~~~SL~rLg~dyiDl~~lH~p~~~~-~~~~~~~l~~l~~~Gkir~iGvSn 142 (276)
T 3f7j_A 73 ELFITSKVWNED---------QGYETTLAAFEKSLERLQLDYLDLYLIHWPGKDK-YKDTWRALEKLYKDGKIRAIGVSN 142 (276)
T ss_dssp GCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEESCCCSSS-HHHHHHHHHHHHHTTSEEEEEEES
T ss_pred cEEEEEeeCCCC---------CCHHHHHHHHHHHHHHhCCCeeEEEEEecCCCCc-HHHHHHHHHHHHHcCCccEEEecc
Confidence 999999997543 5689999999999999999999999999998754 899999999999999999999999
Q ss_pred CCHHHHHHHhhc--CCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhhccCchh
Q 024050 164 ASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRREPGQ 241 (273)
Q Consensus 164 ~~~~~l~~~~~~--~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~ 241 (273)
|++++++++++. .++.++|++||++.++ .+++++|+++||++++|+||++|.|... +.
T Consensus 143 ~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~l~~~------------------~~ 202 (276)
T 3f7j_A 143 FQVHHLEELLKDAEIKPMVNQVEFHPRLTQ--KELRDYCKGQGIQLEAWSPLMQGQLLDN------------------EV 202 (276)
T ss_dssp CCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTGGGTTTTC------------------HH
T ss_pred CCHHHHHHHHHhcCCCceeeeeeeccccCC--HHHHHHHHHCCCEEEEecCCCCCccCCC------------------HH
Confidence 999999998876 4678999999999875 6899999999999999999999986531 24
Q ss_pred HHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 242 EQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 242 ~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
+.++|.++|+|++|+||+|++++|.| +++|
T Consensus 203 l~~ia~~~g~t~aqval~w~l~~~~v--~i~g 232 (276)
T 3f7j_A 203 LTQIAEKHNKSVAQVILRWDLQHGVV--TIPK 232 (276)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHTTCE--ECCB
T ss_pred HHHHHHHhCCCHHHHHHHHHHhCCCE--EeeC
Confidence 67899999999999999999999987 4544
No 15
>3up8_A Putative 2,5-diketo-D-gluconic acid reductase B; nysgrc, PSI-biology, structural genomics; 1.96A {Sinorhizobium meliloti}
Probab=100.00 E-value=7.7e-57 Score=392.89 Aligned_cols=224 Identities=24% Similarity=0.429 Sum_probs=205.2
Q ss_pred CCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--CCCCC
Q 024050 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREK 84 (273)
Q Consensus 7 ~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~~r~~ 84 (273)
.|+|++|| |++||.||||||++ +.+++.++|++|++.|||+||||+.|| ||+.+|++|++ .+|++
T Consensus 23 ~m~~~~l~--g~~v~~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~R~~ 89 (298)
T 3up8_A 23 MMHAVSSN--GANIPALGFGTFRM--------SGAEVLRILPQALKLGFRHVDTAQIYG---NEAEVGEAIQKSGIPRAD 89 (298)
T ss_dssp SCCEECCT--TCCEESEEEECTTC--------CHHHHHHHHHHHHHHTCCEEECCTTTT---CHHHHHHHHHHHTCCGGG
T ss_pred cCceEEeC--CeecCCeeEECCcC--------CHHHHHHHHHHHHHcCCCEEECCCccc---CHHHHHHHHHHcCCChHH
Confidence 48999998 99999999999975 468999999999999999999999999 89999999987 58999
Q ss_pred EEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCC
Q 024050 85 IQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEA 164 (273)
Q Consensus 85 ~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~ 164 (273)
+||+||+++.. .+++.+++++++||+|||+||||+|++|+|+...+.+++|++|++|+++||||+||||||
T Consensus 90 v~I~TK~~~~~---------~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~ 160 (298)
T 3up8_A 90 VFLTTKVWVDN---------YRHDAFIASVDESLRKLRTDHVDLLLLHWPGSDVPMAERIGALNEVRNAGKVRHIGISNF 160 (298)
T ss_dssp CEEEEEECGGG---------CSHHHHHHHHHHHHHHHTSSCEEEEEESCSCCSSCHHHHHHHHHHHHHTTSEEEEEEESC
T ss_pred EEEEeccCCCC---------CCHHHHHHHHHHHHHHhCCCcEEEEEEccCCCCCCHHHHHHHHHHHHHcCCccEEEEcCC
Confidence 99999997533 579999999999999999999999999999998899999999999999999999999999
Q ss_pred CHHHHHHHhhcC--CceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhhccCchhH
Q 024050 165 SPGTIRRAHAVH--PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRREPGQE 242 (273)
Q Consensus 165 ~~~~l~~~~~~~--~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~ 242 (273)
++++++++++.. +++++|++||++.++ .+++++|+++||++++|+||++|.|.. .+.+
T Consensus 161 ~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~G~l~~------------------~~~l 220 (298)
T 3up8_A 161 NTTQMEEAARLSDAPIATNQVEYHPYLDQ--TKVLQTARRLGMSLTSYYAMANGKVPA------------------DPLL 220 (298)
T ss_dssp CHHHHHHHHHHCSSCEEEEEEECBTTBCC--HHHHHHHHHHTCEEEEECTTGGGHHHH------------------CHHH
T ss_pred CHHHHHHHHHhCCCCceEEEEeccccccc--HHHHHHHHHCCCEEEEECCCcCCcccc------------------cchH
Confidence 999999998774 799999999999885 689999999999999999999997542 1346
Q ss_pred HHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 243 QEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 243 ~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.++|.++++|++|+||+|++++|.|+ +++|
T Consensus 221 ~~ia~~~g~s~aqvaL~w~l~~p~v~-~I~g 250 (298)
T 3up8_A 221 TEIGGRHGKTAAQVALRWLVQQQDVI-VLSK 250 (298)
T ss_dssp HHHHHHHTCCHHHHHHHHHHTSTTEE-EEEC
T ss_pred HHHHHHcCCCHHHHHHHHHHHCCCcE-EEEC
Confidence 78999999999999999999999986 5665
No 16
>3b3e_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.80A {Bacillus subtilis} PDB: 3b3d_A
Probab=100.00 E-value=4.3e-56 Score=390.16 Aligned_cols=223 Identities=24% Similarity=0.350 Sum_probs=202.1
Q ss_pred CCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--CCCCCE
Q 024050 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKI 85 (273)
Q Consensus 8 m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~~r~~~ 85 (273)
|+|++|+ +|++||.||||||+++ +.+++.++|++|++.|||+||||+.|| +|+.+|++|++ .+|+++
T Consensus 40 m~~~~L~-~g~~v~~lglGt~~~~-------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~R~~v 108 (310)
T 3b3e_A 40 KDTVKLH-NGVEMPWFGLGVFKVE-------NGNEATESVKAAIKNGYRSIDTAAIYK---NEEGVGIGIKESGVAREEL 108 (310)
T ss_dssp TCEEECT-TSCEEESBCEECTTCC-------TTHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHSSSCGGGC
T ss_pred cceEECC-CCCeeCceeeeCCcCC-------CHHHHHHHHHHHHHcCCCEEECCCccC---CHHHHHHHHHhcCCCcceE
Confidence 8999996 9999999999999864 468999999999999999999999999 79999999986 589999
Q ss_pred EEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCCC
Q 024050 86 QVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEAS 165 (273)
Q Consensus 86 ~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~ 165 (273)
||+||++... .+++.+++++++||+|||+||||+|++|||+... .+++|++|++|+++||||+||||||+
T Consensus 109 ~I~TK~~~~~---------~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~ 178 (310)
T 3b3e_A 109 FITSKVWNED---------QGYETTLAAFEKSLERLQLDYLDLYLIHWPGKDK-YKDTWRALEKLYKDGKIRAIGVSNFQ 178 (310)
T ss_dssp EEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEESCCCSSC-HHHHHHHHHHHHHTTSEEEEEEESCC
T ss_pred EEEEeCCCCC---------CCHHHHHHHHHHHHHHhCCCeeEEEEeeCCCccc-HHHHHHHHHHHHHcCCcceEeecCCC
Confidence 9999997543 5689999999999999999999999999998755 89999999999999999999999999
Q ss_pred HHHHHHHhhc--CCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhhccCchhHH
Q 024050 166 PGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRREPGQEQ 243 (273)
Q Consensus 166 ~~~l~~~~~~--~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (273)
+++++++++. .++.++|++||++.++ .+++++|+++||+|++|+||++|.|.+. +.+.
T Consensus 179 ~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~G~l~~~------------------~~l~ 238 (310)
T 3b3e_A 179 VHHLEELLKDAEIKPMVNQVEFHPRLTQ--KELRDYCKGQGIQLEAWSPLMQGQLLDN------------------EVLT 238 (310)
T ss_dssp HHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTGGGTTTTC------------------HHHH
T ss_pred HHHHHHHHHhcCCCcceeeeeccCccCC--HHHHHHHHHcCCEEEEeccccCCCcCCC------------------HHHH
Confidence 9999999876 4678999999999875 6899999999999999999999987531 3467
Q ss_pred HHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 244 EYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 244 ~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
++|.++|++++|+||+|++++|.| +++|
T Consensus 239 ~iA~~~g~t~aqvaL~w~l~~~~v--~I~g 266 (310)
T 3b3e_A 239 QIAEKHNKSVAQVILRWDLQHGVV--TIPK 266 (310)
T ss_dssp HHHHHHTCCHHHHHHHHHHHTTCE--ECCB
T ss_pred HHHHHhCCCHHHHHHHHHHcCCCe--EEeC
Confidence 899999999999999999999987 4544
No 17
>1hw6_A 2,5-diketo-D-gluconic acid reductase; aldo-keto reductase, TIM barrel, oxidoreductase; 1.90A {Corynebacterium SP} SCOP: c.1.7.1 PDB: 1a80_A* 1m9h_A*
Probab=100.00 E-value=2.7e-56 Score=386.55 Aligned_cols=227 Identities=22% Similarity=0.287 Sum_probs=198.2
Q ss_pred cCCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--CCCC
Q 024050 6 HQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPRE 83 (273)
Q Consensus 6 ~~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~~r~ 83 (273)
|+|++++| ++|++||.||||||+++ .+++.++|++|++.|||+||||+.|| +|+.+|++|++ .+|+
T Consensus 1 m~M~~~~l-~~g~~v~~lglGt~~~~--------~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~R~ 68 (278)
T 1hw6_A 1 MTVPSIVL-NDGNSIPQLGYGVFKVP--------PADTQRAVEEALEVGYRHIDTAAIYG---NEEGVGAAIAASGIARD 68 (278)
T ss_dssp -CCCEEEC-TTSCEEESBCEECCSCC--------GGGHHHHHHHHHHHTCCEEECGGGTT---CCHHHHHHHHHHCCCGG
T ss_pred CCCceEEC-CCCCccCCeeEECCcCC--------hHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHcCCChh
Confidence 67999999 99999999999999753 47899999999999999999999998 79999999985 5899
Q ss_pred CEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCC-CCCHHHHHHHHHHHHHcCCccEEecC
Q 024050 84 KIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT-SVPIEETIGEMKKLVEEGKIKYIGLS 162 (273)
Q Consensus 84 ~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~-~~~~~~~~~~L~~l~~~G~ir~iGvS 162 (273)
++||+||+++.. .+++.+++++++||+|||+||||+|++|||+. ..+..++|++|++|+++||||+||||
T Consensus 69 ~~~i~TK~~~~~---------~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~~~~~~~e~~~al~~l~~~Gkir~iGvS 139 (278)
T 1hw6_A 69 DLFITTKLWNDR---------HDGDEPAAAIAESLAKLALDQVDLYLVHWPTPAADNYVHAWEKMIELRAAGLTRSIGVS 139 (278)
T ss_dssp GCEEEEEECCC--------------CHHHHHHHHHHHHTCSCEEEEEECCCCTTCSSHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred hEEEEEeeCCCC---------CCHHHHHHHHHHHHHHhCCCCEEEEEEcCCCCCCCCHHHHHHHHHHHHHcCCccEEEec
Confidence 999999997532 46888999999999999999999999999987 46789999999999999999999999
Q ss_pred CCCHHHHHHHhhc--CCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhhccCch
Q 024050 163 EASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRREPG 240 (273)
Q Consensus 163 ~~~~~~l~~~~~~--~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~ 240 (273)
||++++++++++. .+|+++|++||+++++ .+++++|+++||++++|+||++|. ++. ...+
T Consensus 140 n~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~--~~~--------------~~~~ 201 (278)
T 1hw6_A 140 NHLVPHLERIVAATGVVPAVNQIELHPAYQQ--REITDWAAAHDVKIESWGPLGQGK--YDL--------------FGAE 201 (278)
T ss_dssp SCCHHHHHHHHHHHSCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTGGGS--SCC--------------TTSH
T ss_pred CCCHHHHHHHHHhcCCCceeEEEEeCcccCC--HHHHHHHHHcCCEEEEeccccCCC--ccc--------------cccH
Confidence 9999999998876 4669999999999986 679999999999999999999984 110 0123
Q ss_pred hHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 241 QEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 241 ~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.+.++|.++++|++|+||+|+++++ | ++++|
T Consensus 202 ~l~~ia~~~g~s~aqvaL~w~l~~~-v-~~I~g 232 (278)
T 1hw6_A 202 PVTAAAAAHGKTPAQAVLRWHLQKG-F-VVFPK 232 (278)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHTT-C-BBCCC
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHCC-C-EEEcC
Confidence 5778999999999999999999996 4 57766
No 18
>4gie_A Prostaglandin F synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: NAP; 1.25A {Trypanosoma cruzi} PDB: 4fzi_A*
Probab=100.00 E-value=4.2e-56 Score=387.62 Aligned_cols=231 Identities=23% Similarity=0.319 Sum_probs=200.7
Q ss_pred ccCCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--CCC
Q 024050 5 KHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPR 82 (273)
Q Consensus 5 ~~~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~~r 82 (273)
..+|+|++| ++|++||.||||||+++ +.+++.++|++|+++|||+||||+.|| ||+.+|++++. .+|
T Consensus 10 ~~~~~~v~L-n~G~~ip~lGlGtw~~~-------d~~e~~~~v~~Al~~Gin~~DTA~~Yg---sE~~vG~~l~~~~~~r 78 (290)
T 4gie_A 10 NCNYNCVTL-HNSVRMPQLGLGVWRAQ-------DGAETANAVRWAIEAGYRHIDTAYIYS---NERGVGQGIRESGVPR 78 (290)
T ss_dssp SSSSCEEEC-TTSCEEESBCEECTTCC-------TTHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHCCCG
T ss_pred CCCCCEEEc-CCCCCccceeEECCCCC-------CHHHHHHHHHHHHHcCCCEEecccccC---CHHHHHHHHHhcCCcc
Confidence 447999999 99999999999999764 568899999999999999999999998 89999999987 789
Q ss_pred CCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecC
Q 024050 83 EKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS 162 (273)
Q Consensus 83 ~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS 162 (273)
++++|+||++... .+++.+.+++++||+|||+||||+|++|||+. .+..++|++|++|+++||||+||||
T Consensus 79 ~~~~i~tk~~~~~---------~~~~~~~~~~e~SL~rL~~dyiDly~lH~p~~-~~~~e~~~al~~l~~~Gkir~iGvS 148 (290)
T 4gie_A 79 EEVWVTTKVWNSD---------QGYEKTLAAFERSRELLGLEYIDLYLIHWPGK-KKFVDTWKALEKLYEEKKVRAIGVS 148 (290)
T ss_dssp GGSEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEECCCCS-SSHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred hhccccccccccC---------CChHHHHHHHHHHHHHhCCCceeeEEecCCCC-CcchHHHHHHHHHHHCCCcceeeec
Confidence 9999999987654 46899999999999999999999999999976 5788999999999999999999999
Q ss_pred CCCHHHHHHHhhcCCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhhccCchhH
Q 024050 163 EASPGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRREPGQE 242 (273)
Q Consensus 163 ~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~ 242 (273)
||++++++++.+...+..+|++|++..+..+.+++++|+++||++++|+||++|.|++... ...+
T Consensus 149 n~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~l~~~~~~~gi~~~a~spl~~G~l~~~~~---------------~~~l 213 (290)
T 4gie_A 149 NFEPHHLTELFKSCKIRPMVNQVELHPLFQQRTLREFCKQHNIAITAWSPLGSGEEAGILK---------------NHVL 213 (290)
T ss_dssp SCCHHHHHHHHTTCSSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCSSGGGCGGG---------------CHHH
T ss_pred CCCHHHHHHHHHhccCCCceeeEeccccchhHHHHHHHHHcCceEeeecccccccccccch---------------hHHH
Confidence 9999999999887544334444444444445789999999999999999999999876321 2346
Q ss_pred HHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 243 QEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 243 ~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.++|.++|+|++|+||+|++++|.| +++|
T Consensus 214 ~~iA~~~g~t~aqvaL~w~l~~~~v--~I~G 242 (290)
T 4gie_A 214 GEIAKKHNKSPAQVVIRWDIQHGIV--TIPK 242 (290)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHTTCE--ECCB
T ss_pred HHHHHHhCCCHHHHHHHHHHhCCCE--EEEC
Confidence 7899999999999999999999987 4554
No 19
>1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto reductase, succinic semialdehyde oxidoreductase, AKR7 family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2clp_A* 2c91_A*
Probab=100.00 E-value=3.3e-56 Score=394.94 Aligned_cols=245 Identities=24% Similarity=0.301 Sum_probs=208.2
Q ss_pred ccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--CCCCCEEEEeccCcCCC
Q 024050 19 EVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKIQVATKFGIAGI 96 (273)
Q Consensus 19 ~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~~r~~~~i~tK~~~~~~ 96 (273)
.+|+||||||++|. ..+.+++.++|++|+++|||+||||+.||.|.||+.+|++|+. ..|+++||+||+++..+
T Consensus 4 ~~~~lglGt~~~g~----~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~r~~~~i~TK~~~~~~ 79 (327)
T 1gve_A 4 ARPATVLGAMEMGR----RMDVTSSSASVRAFLQRGHTEIDTAFVYANGQSETILGDLGLGLGRSGCKVKIATKAAPMFG 79 (327)
T ss_dssp CCCEEEEECTTBTT----TBCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHTTSCCCTTSTTCCSEEEEEECSCTT
T ss_pred CCCCeEEcccccCC----CCCHHHHHHHHHHHHHcCCCEEEchhhcCCCchHHHHHHHHhhcCCCCCeEEEEEEECCCCC
Confidence 46899999999875 2478999999999999999999999999999999999999985 24788999999964321
Q ss_pred CCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhc-
Q 024050 97 GVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV- 175 (273)
Q Consensus 97 ~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~- 175 (273)
.+.+++.+++++++||+|||+||||+|++|+|+...+++++|++|++|+++||||+||||||++++++++++.
T Consensus 80 ------~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~ 153 (327)
T 1gve_A 80 ------KTLKPADVRFQLETSLKRLQCPRVDLFYLHFPDHGTPIEETLQACHQLHQEGKFVELGLSNYVSWEVAEICTLC 153 (327)
T ss_dssp ------CCSSHHHHHHHHHHHHHHTTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHH
T ss_pred ------CCCCHHHHHHHHHHHHHHHCCCeEeEEEecCCCCCCCHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHH
Confidence 1467999999999999999999999999999999889999999999999999999999999999999887654
Q ss_pred -----CCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCC---CCchhh---------hhcc-
Q 024050 176 -----HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENV---PADSFL---------VQRR- 237 (273)
Q Consensus 176 -----~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~---~~~~~~---------~~~~- 237 (273)
.+++++|++||++++..+.+++++|+++||+|++|+||++|+|++++..... +...+. ..++
T Consensus 154 ~~~g~~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (327)
T 1gve_A 154 KKNGWIMPTVYQGMYNAITRQVETELFPCLRHFGLRFYAFNPLAGGLLTGRYKYQDKDGKNPESRFFGNPFSQLYMDRYW 233 (327)
T ss_dssp HHHTCCCEEEEEEECBTTBCGGGTTHHHHHHHHTCEEEEECTTGGGGGGTCCCGGGGGSCCCSSSSSSCTTHHHHHHHHC
T ss_pred HHcCCCCeEEEeccCcceecccHHHHHHHHHHcCCeEEEecccccccccCcccCCCccccCCCccccccccchhhhhccc
Confidence 5789999999999998778899999999999999999999999997432110 000000 0000
Q ss_pred ------CchhHHHHHHh----cCCChHHHHHHhhhcCCCc-----ccccCC
Q 024050 238 ------EPGQEQEYLFS----HREPCQKVQLHFCSTSPSM-----GSRTGG 273 (273)
Q Consensus 238 ------~~~~~~~~~~~----~~~~~~q~aL~~~l~~p~v-----~s~~~g 273 (273)
..+.+.++|.+ +|+|++|+||+|++++|.| .++++|
T Consensus 234 ~~~~~~~~~~l~~ia~~~~~~~g~s~aqvaL~w~l~~~~v~~~~g~~~I~g 284 (327)
T 1gve_A 234 KEEHFNGIALVEKALKTTYGPTAPSMISAAVRWMYHHSQLKGTQGDAVILG 284 (327)
T ss_dssp SHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHTSSCCGGGTCEEEEC
T ss_pred ChHHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHhCCCccccCCCeEEEC
Confidence 12356788999 9999999999999999999 677776
No 20
>1afs_A 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, NAD; HET: NAP TES; 2.50A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 1lwi_A*
Probab=100.00 E-value=6.3e-56 Score=392.25 Aligned_cols=239 Identities=25% Similarity=0.318 Sum_probs=206.6
Q ss_pred cCCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc------
Q 024050 6 HQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------ 79 (273)
Q Consensus 6 ~~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~------ 79 (273)
++|++++| ++|++||.||||||+++. .+.+++.++|+.|+++|||+||||+.|| +|+.+|++|++
T Consensus 3 ~~~~~~~L-~tg~~v~~lglGt~~~g~-----~~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g~ 73 (323)
T 1afs_A 3 SISLRVAL-NDGNFIPVLGFGTTVPEK-----VAKDEVIKATKIAIDNGFRHFDSAYLYE---VEEEVGQAIRSKIEDGT 73 (323)
T ss_dssp GGGCEEEC-TTSCEEESSEEECCCCTT-----SCTTHHHHHHHHHHHTTCCEEECCTTTT---CHHHHHHHHHHHHHTTS
T ss_pred CCCceEEC-CCCCeECCeeEecccCCC-----CCHHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHHHhcCC
Confidence 67899999 799999999999998752 3678999999999999999999999998 79999999986
Q ss_pred CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCC-------------------CCCH
Q 024050 80 LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT-------------------SVPI 140 (273)
Q Consensus 80 ~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~-------------------~~~~ 140 (273)
.+|+++||+||++... .+++.+++++++||+|||+||||+|++|||+. ..++
T Consensus 74 ~~R~~~~I~TK~~~~~---------~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~d~~~~~~~~~~~~ 144 (323)
T 1afs_A 74 VKREDIFYTSKLWSTF---------HRPELVRTCLEKTLKSTQLDYVDLYIIHFPMALQPGDIFFPRDEHGKLLFETVDI 144 (323)
T ss_dssp CCGGGCEEEEEECGGG---------CSTTTHHHHHHHHHHHHCCSSEEEEEESCSCEECSSSSSSCBCTTCCBCEECCCH
T ss_pred CChHHeEEEEecCCCc---------CCHHHHHHHHHHHHHHhCCCceeEEEecCcCcCCCCcccCcccccccccccCCCH
Confidence 4799999999997532 45788999999999999999999999999942 2367
Q ss_pred HHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcC----CceEEeeecccccccccccHHHHHHHhCCeEEecccCCCc
Q 024050 141 EETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVH----PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 141 ~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~----~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G 216 (273)
+++|++|++|+++||||+||||||++++++++++.. +|+++|++||++.++ .+++++|+++||+|++|+||++|
T Consensus 145 ~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G 222 (323)
T 1afs_A 145 CDTWEAMEKCKDAGLAKSIGVSNFNCRQLERILNKPGLKYKPVCNQVECHLYLNQ--SKMLDYCKSKDIILVSYCTLGSS 222 (323)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTSCC
T ss_pred HHHHHHHHHHHHcCCcCEEEeeCCCHHHHHHHHHhcCcCCCCEEEeeccccccch--HHHHHHHHHcCCEEEEecCccCC
Confidence 899999999999999999999999999999998863 669999999999875 67999999999999999999999
Q ss_pred cCCCCCCCCCCCCchhhhhccCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 217 FFGGKAVVENVPADSFLVQRREPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 217 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.|++ +.....| .. ...+.+.++|.++|+|++|+||+|++++| + ++++|
T Consensus 223 ~l~~-~~~~~~~--~~----~~~~~l~~ia~~~g~s~aqvaL~w~l~~~-~-~vI~g 270 (323)
T 1afs_A 223 RDKT-WVDQKSP--VL----LDDPVLCAIAKKYKQTPALVALRYQLQRG-V-VPLIR 270 (323)
T ss_dssp CCTT-TSCTTSC--CG----GGCHHHHHHHHHTTCCHHHHHHHHHHHTT-C-EEEEC
T ss_pred cccc-ccccCCc--ch----hcCHHHHHHHHHhCCCHHHHHHHHHHhCC-C-EEeeC
Confidence 9875 2211111 01 12456789999999999999999999998 3 56655
No 21
>3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A {Mus musculus} SCOP: c.1.7.1
Probab=100.00 E-value=9.3e-56 Score=391.50 Aligned_cols=239 Identities=22% Similarity=0.311 Sum_probs=205.6
Q ss_pred cCCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc------
Q 024050 6 HQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------ 79 (273)
Q Consensus 6 ~~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~------ 79 (273)
++|++++| +||++||.||||||+++ ..+.+++.++|++|+++|||+||||+.|| +|+.+|++|++
T Consensus 4 ~~m~~~~L-~tg~~v~~lglGt~~~~-----~~~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~~~ 74 (324)
T 3ln3_A 4 SXQHCVXL-NDGHLIPALGFGTYXPX-----EVPXSXSLEAACLALDVGYRHVDTAYAYQ---VEEEIGQAIQSXIXAGV 74 (324)
T ss_dssp --CCEEEC-TTSCEEESSEEECCCCT-----TSCHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTS
T ss_pred cCCceEEC-CCCCCcCCeeecCCccc-----CCChHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHhhccCC
Confidence 57999999 99999999999999865 24789999999999999999999999998 79999999985
Q ss_pred CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCC-------------------CCCH
Q 024050 80 LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT-------------------SVPI 140 (273)
Q Consensus 80 ~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~-------------------~~~~ 140 (273)
.+|+++||+||++... .+++.+++++++||+|||+||||+|++|||+. ..++
T Consensus 75 ~~R~~~~I~TK~~~~~---------~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (324)
T 3ln3_A 75 VXREDLFVTTKLWCTC---------FRPELVXPALEXSLXXLQLDYVDLYIMHYPVPMXSGDNDFPVNEQGXSLLDTVDF 145 (324)
T ss_dssp CCGGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEESCSCCBCCSSCSSCBCTTCCBCBCCCCH
T ss_pred cccceeEEEeeeCCcc---------CCHHHHHHHHHHHHHHhCCCcceEEEEecCccccccccccccccccccccccCCH
Confidence 4899999999997543 56999999999999999999999999999975 3468
Q ss_pred HHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcC----CceEEeeecccccccccccHHHHHHHhCCeEEecccCCCc
Q 024050 141 EETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVH----PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 141 ~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~----~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G 216 (273)
+++|++|++|+++||||+||||||++++++++++.. ++.++|++||++.++ .+++++|+++||+|++|+||++|
T Consensus 146 ~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~g 223 (324)
T 3ln3_A 146 CDTWERLEECXDAGLVXSIGVSNFNHRQLERILNXPGLXYXPVCNQVECHLYLNQ--RXLLDYCESXDIVLVAYGALGTQ 223 (324)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTSCC
T ss_pred HHHHHHHHHHHhcCCeeEEEecCCcHHHHHHHHHhcCccCCceeeEeeeCcccch--HHHHHHHHHcCCEEEEecCCCCC
Confidence 899999999999999999999999999999998863 377999999999874 78999999999999999999999
Q ss_pred cCCCCCCCCCCCCchhhhhccCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 217 FFGGKAVVENVPADSFLVQRREPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 217 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.+.. +.....|. ....+.+.++|.++|+|++|+||+|++++|.+ +++|
T Consensus 224 ~~~~-~~~~~~~~------~~~~~~l~~ia~~~g~t~aqvaL~w~l~~~~~--~I~g 271 (324)
T 3ln3_A 224 RYXE-WVDQNSPV------LLNDPVLCDVAXXNXRSPALIALRYLIQRGIV--PLAQ 271 (324)
T ss_dssp CCTT-TSCTTSCC------GGGCHHHHHHHHHHTSCHHHHHHHHHHHTTCE--EEEC
T ss_pred Cccc-ccccCCcc------hhcCHHHHHHHHhhCCCHHHHHHHHHHhCCCE--EEeC
Confidence 7642 11111110 11134678999999999999999999999963 5554
No 22
>2bp1_A Aflatoxin B1 aldehyde reductase member 2; oxidoreductase, aldo-keto reductase family 7, SSA reductase, barrel; HET: FLC NDP; 2.4A {Homo sapiens}
Probab=100.00 E-value=4.1e-56 Score=398.72 Aligned_cols=251 Identities=24% Similarity=0.305 Sum_probs=207.1
Q ss_pred CCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--CCCCCEEEEec
Q 024050 13 LGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKIQVATK 90 (273)
Q Consensus 13 lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~~r~~~~i~tK 90 (273)
.+.++..||+||||||++|. ..+.+++.++|++|+++|||+||||+.||.|.||+.+|++|++ ..|+++||+||
T Consensus 31 ~~~~~~~ip~lglGt~~~g~----~~~~~~~~~~l~~Al~~Gin~~DTA~~Yg~G~sE~~lG~al~~~~~~r~~v~I~TK 106 (360)
T 2bp1_A 31 MSRPPPPRVASVLGTMEMGR----RMDAPASAAAVRAFLERGHTELDTAFMYSDGQSETILGGLGLGLGGGDCRVKIATK 106 (360)
T ss_dssp -------CCEEEEECTTBTT----TBCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHTSCCCTTSTTCCCEEEEE
T ss_pred cCCCCCCCCCEEECchhhCC----CCCHHHHHHHHHHHHHcCCCEEECccccCCCChHHHHHHHHhhccCCCCeEEEEee
Confidence 44557789999999999874 2478999999999999999999999999999999999999973 33567999999
Q ss_pred cCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCCCHHHHH
Q 024050 91 FGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIR 170 (273)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~ 170 (273)
+++..+ .+.+++.+++++++||+|||+||||+|++|+|+...+++++|++|++|+++||||+||||||++++++
T Consensus 107 ~~~~~~------~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~aL~~l~~~Gkir~iGvSn~~~~~l~ 180 (360)
T 2bp1_A 107 ANPWDG------KSLKPDSVRSQLETSLKRLQCPQVDLFYLHAPDHGTPVEETLHACQRLHQEGKFVELGLSNYASWEVA 180 (360)
T ss_dssp ECCCTT------CCSSHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHH
T ss_pred ecCCCC------CCCCHHHHHHHHHHHHHHhCCCeEeEEEecCCCCCCCHHHHHHHHHHHHHCCCccEEEEeCCCHHHHH
Confidence 964321 14679999999999999999999999999999998899999999999999999999999999999998
Q ss_pred HHhhc------CCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCC-C--Cchhhh-------
Q 024050 171 RAHAV------HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENV-P--ADSFLV------- 234 (273)
Q Consensus 171 ~~~~~------~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~-~--~~~~~~------- 234 (273)
++++. .+++++|++||++++..+.+++++|+++||+|++|+||++|+|++++..... + ...+..
T Consensus 181 ~~~~~~~~~g~~~~~~~Q~~yn~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~~~~~~~~~~~~~~~~~~~~~~ 260 (360)
T 2bp1_A 181 EICTLCKSNGWILPTVYQGMYNATTRQVETELFPCLRHFGLRFYAYNPLAGGLLTGKYKYEDKDGKQPVGRFFGNSWAET 260 (360)
T ss_dssp HHHHHHHHHTCCCEEEEEEECBTTBCGGGTTHHHHHHHHTCEEEEECTTGGGGGGTCCCGGGGTTTCCSBTTBSSTTHHH
T ss_pred HHHHHHHHcCCCCceEEeeccchhhccchhhHHHHHHHcCCeEEEecccccCcccCCccCcCcccccccccccccccchh
Confidence 87754 5789999999999998778899999999999999999999999998432111 0 111100
Q ss_pred --hcc-------CchhHHHHHHh----cCCChHHHHHHhhhcCCCc-----ccccCC
Q 024050 235 --QRR-------EPGQEQEYLFS----HREPCQKVQLHFCSTSPSM-----GSRTGG 273 (273)
Q Consensus 235 --~~~-------~~~~~~~~~~~----~~~~~~q~aL~~~l~~p~v-----~s~~~g 273 (273)
.++ ..+.+.++|.+ +|++++|+||+|++++|.| .++++|
T Consensus 261 ~~~~~~~~~~~~~~~~l~~ia~~~~~~~g~s~aqvaL~w~l~~~~v~~~~g~~vI~G 317 (360)
T 2bp1_A 261 YRNRFWKEHHFEAIALVEKALQAAYGASAPSVTSAALRWMYHHSQLQGAHGDAVILG 317 (360)
T ss_dssp HHHHHCCHHHHHHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHSSCCGGGTCEEEEC
T ss_pred hhhcccchhHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHhCCcccccCCCeEEEC
Confidence 000 11346778888 9999999999999999999 677776
No 23
>1vbj_A Prostaglandin F synthase; TIM barrel, oxidoreductase; HET: NAP CIT; 2.10A {Trypanosoma brucei}
Probab=100.00 E-value=2.2e-55 Score=381.23 Aligned_cols=224 Identities=23% Similarity=0.335 Sum_probs=201.4
Q ss_pred CCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--CCCCC
Q 024050 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREK 84 (273)
Q Consensus 7 ~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~~r~~ 84 (273)
.|++++| ++|++||.||||||+++ +.+++.++|+.|++.|||+||||+.|| +|+.+|++|++ .+|++
T Consensus 8 ~m~~~~l-~~g~~v~~lglGt~~~~-------~~~~~~~~v~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~R~~ 76 (281)
T 1vbj_A 8 LTQSLKL-SNGVMMPVLGFGMWKLQ-------DGNEAETATMWAIKSGYRHIDTAAIYK---NEESAGRAIASCGVPREE 76 (281)
T ss_dssp CCCEEEC-TTSCEEESBCEECTTCC-------TTHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHSSSCGGG
T ss_pred CCceEEC-CCCCeecCeeEECCcCC-------CHHHHHHHHHHHHHcCCCEEECCcccC---CHHHHHHHHHhcCCChhH
Confidence 5999999 89999999999999864 458899999999999999999999998 79999999985 57999
Q ss_pred EEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCC
Q 024050 85 IQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEA 164 (273)
Q Consensus 85 ~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~ 164 (273)
+||+||+++. +.+++.+++++++||+|||+||||+|++|||+ ..+..++|++|++|+++||||+||||||
T Consensus 77 ~~i~TK~~~~---------~~~~~~v~~~~~~SL~rL~~dyiDl~~lH~p~-~~~~~~~~~al~~l~~~Gkir~iGvSn~ 146 (281)
T 1vbj_A 77 LFVTTKLWNS---------DQGYESTLSAFEKSIKKLGLEYVDLYLIHWPG-KDKFIDTWKAFEKLYADKKVRAIGVSNF 146 (281)
T ss_dssp CEEEEEECGG---------GCSHHHHHHHHHHHHHHHTCSCBSEEEESCCC-SSCHHHHHHHHHHHHHTTSBSCEEEESC
T ss_pred EEEEeccCCC---------CCCHHHHHHHHHHHHHHhCCCcEEEEEEcCCC-CCCHHHHHHHHHHHHHCCCccEEEeeCC
Confidence 9999999753 25689999999999999999999999999998 6778999999999999999999999999
Q ss_pred CHHHHHHHhhc--CCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhhccCchhH
Q 024050 165 SPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRREPGQE 242 (273)
Q Consensus 165 ~~~~l~~~~~~--~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~ 242 (273)
++++++++++. .+++++|++||+++++ .+++++|+++||++++|+||++|.+.. .+.+
T Consensus 147 ~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~G~~~~------------------~~~l 206 (281)
T 1vbj_A 147 HEHHIEELLKHCKVAPMVNQIELHPLLNQ--KALCEYCKSKNIAVTAWSPLGQGHLVE------------------DARL 206 (281)
T ss_dssp CHHHHHHHHTSCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTGGGTTTT------------------CHHH
T ss_pred CHHHHHHHHHhCCCCceeeeEEeccccCC--HHHHHHHHHcCCEEEEecCCcCCCCCC------------------CHHH
Confidence 99999999886 4569999999999886 579999999999999999999984321 1346
Q ss_pred HHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 243 QEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 243 ~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.++|.++|++++|+||+|+++++. ++++|
T Consensus 207 ~~ia~~~g~s~aqvaL~w~l~~~~--~~I~g 235 (281)
T 1vbj_A 207 KAIGGKYGKTAAQVMLRWEIQAGV--ITIPK 235 (281)
T ss_dssp HHHHHTTTCCHHHHHHHHHHHTTC--EECCB
T ss_pred HHHHHHhCCCHHHHHHHHHHHCCC--EEecC
Confidence 789999999999999999999963 46665
No 24
>4f40_A Prostaglandin F2-alpha synthase/D-arabinose dehyd; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: CIT; 1.60A {Leishmania major} PDB: 4g5d_A*
Probab=100.00 E-value=1.4e-55 Score=384.04 Aligned_cols=225 Identities=23% Similarity=0.304 Sum_probs=200.6
Q ss_pred CCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--CCCCC
Q 024050 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREK 84 (273)
Q Consensus 7 ~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~~r~~ 84 (273)
++++.+| ++|++||.||||||+++. .+++.++|++|+++|||+||||+.|| +|+.+|++|++ .+|++
T Consensus 9 ~~~~~~l-~~g~~v~~lglGt~~~~~-------~~~~~~~v~~Al~~G~~~~DTA~~Yg---~E~~vG~al~~~~~~R~~ 77 (288)
T 4f40_A 9 DKAMVTL-SNGVKMPQFGLGVWQSPA-------GEVTENAVKWALCAGYRHIDTAAIYK---NEESVGAGLRASGVPRED 77 (288)
T ss_dssp TTCEEEC-TTSCEEESBCEECTTCCT-------THHHHHHHHHHHHTTCCEEECCGGGT---CHHHHHHHHHHHTCCGGG
T ss_pred cCCeEEC-CCCCeecceeEECCcCCC-------cHHHHHHHHHHHHcCCCeEECccccc---CHHHHHHHHHhcCCChhh
Confidence 4677899 899999999999998763 48899999999999999999999998 89999999986 58999
Q ss_pred EEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCC-------CCHHHHHHHHHHHHHcCCcc
Q 024050 85 IQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTS-------VPIEETIGEMKKLVEEGKIK 157 (273)
Q Consensus 85 ~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~-------~~~~~~~~~L~~l~~~G~ir 157 (273)
+||+||+++.. .+++.+++++++||+|||+||||+|++|+|+.. .+..++|++|++|+++||||
T Consensus 78 ~~I~TK~~~~~---------~~~~~i~~~~~~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~e~~~al~~l~~~Gkir 148 (288)
T 4f40_A 78 VFITTKLWNTE---------QGYESTLAAFEESRQKLGVDYIDLYLIHWPRGKDILSKEGKKYLDSWRAFEQLYKEKKVR 148 (288)
T ss_dssp CEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHTTSEE
T ss_pred EEEEEecCCCc---------CCHHHHHHHHHHHHHHhCCCcEEEEEEecCCCCcccccccccHHHHHHHHHHHHHcCCcc
Confidence 99999997543 568999999999999999999999999999863 56789999999999999999
Q ss_pred EEecCCCCHHHHHHHhhc--CCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhh
Q 024050 158 YIGLSEASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQ 235 (273)
Q Consensus 158 ~iGvS~~~~~~l~~~~~~--~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~ 235 (273)
+||||||++++++++++. .+++++|++||+++++ .+++++|+++||++++|+||++|.|.+
T Consensus 149 ~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~l~~--------------- 211 (288)
T 4f40_A 149 AIGVSNFHIHHLEDVLAMCTVTPMVNQVELHPLNNQ--ADLRAFCDAKQIKVEAWSPLGQGKLLS--------------- 211 (288)
T ss_dssp EEEEESCCHHHHHHHHTTCSSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTC--CGGG---------------
T ss_pred EEEeccCCHHHHHHHHHhCCCCCeEEeccCccccCC--HHHHHHHHHCCCEEEEecCCCCCcccc---------------
Confidence 999999999999999886 4689999999999986 679999999999999999999998764
Q ss_pred ccCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 236 RREPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.+.+.++|.++++|++|+||+|++++| .++++|
T Consensus 212 ---~~~l~~ia~~~g~t~aqvaL~w~l~~~--~~~i~g 244 (288)
T 4f40_A 212 ---NPILSAIGAKYNKTAAQVILRWNIQKN--LITIPK 244 (288)
T ss_dssp ---CHHHHHHHHHHTCCHHHHHHHHHHHTT--CEECCB
T ss_pred ---cHHHHHHHHHhCCCHHHHHHHHHHhCC--CeEeeC
Confidence 124678999999999999999999999 345554
No 25
>2wzm_A Aldo-keto reductase; oxidoreductase; HET: NA7; 1.64A {Mycobacterium smegmatis} PDB: 2wzt_A
Probab=100.00 E-value=1.3e-55 Score=382.94 Aligned_cols=226 Identities=23% Similarity=0.349 Sum_probs=200.6
Q ss_pred ccCCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--CCC
Q 024050 5 KHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPR 82 (273)
Q Consensus 5 ~~~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~~r 82 (273)
...|++++| ++|++||.||||||+++ .+++.++|+.|++.|||+||||+.|| +|+.+|++|++ .+|
T Consensus 8 ~~~m~~~~l-~~g~~v~~lglGt~~~~--------~~~~~~~v~~Al~~Gi~~iDTA~~Yg---~E~~lG~al~~~~~~R 75 (283)
T 2wzm_A 8 AAAIPTVTL-NDDNTLPVVGIGVGELS--------DSEAERSVSAALEAGYRLIDTAAAYG---NEAAVGRAIAASGIPR 75 (283)
T ss_dssp --CCCEEEC-TTSCEEESEEEECTTCC--------HHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHTCCCG
T ss_pred CCCCceEEC-CCCCEEcceeEECCCCC--------hHHHHHHHHHHHHcCCCEEECCCccc---CHHHHHHHHHhcCCCc
Confidence 346999999 99999999999999753 48899999999999999999999998 79999999985 579
Q ss_pred CCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCC-CCHHHHHHHHHHHHHcCCccEEec
Q 024050 83 EKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTS-VPIEETIGEMKKLVEEGKIKYIGL 161 (273)
Q Consensus 83 ~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~-~~~~~~~~~L~~l~~~G~ir~iGv 161 (273)
+++||+||++.. +.+++.+++++++||+|||+||||+|++|||+.. .+..++|++|++|+++||||+|||
T Consensus 76 ~~v~i~TK~~~~---------~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~e~~~al~~l~~~Gkir~iGv 146 (283)
T 2wzm_A 76 DEIYVTTKLATP---------DQGFTSSQAAARASLERLGLDYVDLYLIHWPGGDTSKYVDSWGGLMKVKEDGIARSIGV 146 (283)
T ss_dssp GGCEEEEEECGG---------GCSHHHHHHHHHHHHHHHTCSCEEEEEECCCTTCHHHHHHHHHHHHHHHHTTSEEEEEE
T ss_pred ccEEEEeccCCC---------CCCHHHHHHHHHHHHHHhCCCCEeEEEEcCCCCCCCCHHHHHHHHHHHHHcCCccEEEE
Confidence 999999999753 2568999999999999999999999999999874 457899999999999999999999
Q ss_pred CCCCHHHHHHHhhc--CCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhhccCc
Q 024050 162 SEASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRREP 239 (273)
Q Consensus 162 S~~~~~~l~~~~~~--~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~~~~~ 239 (273)
|||++++++++++. .+|+++|++||+++++ .+++++|+++||+|++|+||++|.+.. .
T Consensus 147 Sn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~l~~------------------~ 206 (283)
T 2wzm_A 147 CNFGAEDLETIVSLTYFTPAVNQIELHPLLNQ--AALREVNAGYNIVTEAYGPLGVGRLLD------------------H 206 (283)
T ss_dssp ESCCHHHHHHHHHHHCCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEECTTTTTGGGG------------------C
T ss_pred cCCCHHHHHHHHHhcCCCcccccccCCcccCC--HHHHHHHHHCCCEEEEecCCCCCcccc------------------h
Confidence 99999999999876 4569999999999986 579999999999999999999985421 1
Q ss_pred hhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 240 GQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 240 ~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
+.+.++|.++|++++|+||+|++++|. ++++|
T Consensus 207 ~~l~~ia~~~g~s~aqvaL~w~l~~~~--~~I~g 238 (283)
T 2wzm_A 207 PAVTAIAEAHGRTAAQVLLRWSIQLGN--VVISR 238 (283)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHTTC--EEEEC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHCCC--EEEeC
Confidence 346789999999999999999999974 55654
No 26
>3buv_A 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reductase, catalytic tetrad, hepes, NADP, bIle catabolism, disease mutation, lipid metabolism; HET: NAP EPE; 1.35A {Homo sapiens} PDB: 3bur_A* 3bv7_A* 3caq_A* 3cas_A* 3cav_A* 3g1r_A* 3cot_A* 3dop_A* 3cmf_A* 3uzx_A* 3uzw_A* 3uzy_A* 3uzz_A*
Probab=100.00 E-value=4.1e-55 Score=387.50 Aligned_cols=240 Identities=21% Similarity=0.284 Sum_probs=206.9
Q ss_pred cCCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc------
Q 024050 6 HQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------ 79 (273)
Q Consensus 6 ~~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~------ 79 (273)
.+|++++| ++|++||.||||||++++ ..+.+++.++|++|+++|||+||||+.|| +|+.+|++|++
T Consensus 5 ~~~~~~~L-~tg~~v~~lglGt~~~g~----~~~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g~ 76 (326)
T 3buv_A 5 AASHRIPL-SDGNSIPIIGLGTYSEPK----STPKGACATSVKVAIDTGYRHIDGAYIYQ---NEHEVGEAIREKIAEGK 76 (326)
T ss_dssp SSCCEEEC-TTSCEEESBCEECCCCGG----GCCTTHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTS
T ss_pred CCCCeEEC-CCCCeeCCeeEcccCCCC----CCCHHHHHHHHHHHHHcCCCEEECccccC---CHHHHHHHHHHHHhcCC
Confidence 45899999 899999999999998763 23678999999999999999999999998 79999999986
Q ss_pred CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCC-------------------CCCH
Q 024050 80 LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT-------------------SVPI 140 (273)
Q Consensus 80 ~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~-------------------~~~~ 140 (273)
.+|+++||+||++... .+++.+++++++||+|||+||||+|++|||+. ..++
T Consensus 77 ~~R~~~~i~TK~~~~~---------~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (326)
T 3buv_A 77 VRREDIFYCGKLWATN---------HVPEMVRPTLERTLRVLQLDYVDLYIIEVPMAFKPGDEIYPRDENGKWLYHKSNL 147 (326)
T ss_dssp CCGGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEESCSCCBCCSSCSSCBCTTCCBCBCCCCH
T ss_pred CChhHeEEEeeeCCCc---------CCHHHHHHHHHHHHHHhCCCceeEEEEccCCccCCccccCccccccccccccccH
Confidence 4799999999997532 56899999999999999999999999999964 2367
Q ss_pred HHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcC--C--ceEEeeecccccccccccHHHHHHHhCCeEEecccCCCc
Q 024050 141 EETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVH--P--ITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 141 ~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~--~--~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G 216 (273)
.++|++|++|+++||||+||||||++++++++++.. + |+++|++||++.++ .+++++|+++||+|++|+||++|
T Consensus 148 ~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G 225 (326)
T 3buv_A 148 CATWEAMEACKDAGLVKSLGVSNFNRRQLELILNKPGLKHKPVSNQVECHPYFTQ--PKLLKFCQQHDIVITAYSPLGTS 225 (326)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCCC
T ss_pred HHHHHHHHHHHHcCCccEEEEeCCCHHHHHHHHHhCCCCCCCeeeeeecccccCc--HHHHHHHHHcCCEEEEeccccCC
Confidence 899999999999999999999999999999998863 4 77999999999875 67999999999999999999999
Q ss_pred cCCCCCCCCCCCCchhhhhccCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 217 FFGGKAVVENVPADSFLVQRREPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 217 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.|+ ++.....| .. ...+.+.++|.++|+|++|+||+|++++| + ++++|
T Consensus 226 ~l~-~~~~~~~~--~~----~~~~~l~~ia~~~g~s~aqvaL~w~l~~~-~-~~I~g 273 (326)
T 3buv_A 226 RNP-IWVNVSSP--PL----LKDALLNSLGKRYNKTAAQIVLRFNIQRG-V-VVIPK 273 (326)
T ss_dssp CCT-TTSCTTSC--CG----GGCHHHHHHHHHHTCCHHHHHHHHHHHTT-C-EECCB
T ss_pred ccc-cccccCCc--cc----cccHHHHHHHHHhCCCHHHHHHHHHHhCC-C-EEEeC
Confidence 987 43211111 11 12356789999999999999999999998 3 56665
No 27
>1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961; structural genomics, PSI, protein structure initiative; 1.60A {Caenorhabditis elegans} SCOP: c.1.7.1
Probab=100.00 E-value=1.8e-55 Score=388.45 Aligned_cols=240 Identities=24% Similarity=0.362 Sum_probs=203.8
Q ss_pred CCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc------CC
Q 024050 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------LP 81 (273)
Q Consensus 8 m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~------~~ 81 (273)
|++++| ++|++||.||||||++ +.+++.++|++|++.|||+||||+.|| +|+.+|++|++ .+
T Consensus 5 ~~~~~l-~~g~~vs~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~vG~al~~~~~~~~~~ 72 (317)
T 1qwk_A 5 TASIKL-SNGVEMPVIGLGTWQS--------SPAEVITAVKTAVKAGYRLIDTASVYQ---NEEAIGTAIKELLEEGVVK 72 (317)
T ss_dssp CCEEEC-TTSCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHHTSCC
T ss_pred cceEEC-CCCCEeCCeeEECCcC--------CHHHHHHHHHHHHHcCCCEEEcccccc---CHHHHHHHHHHHhhcCCCC
Confidence 478999 7999999999999863 688999999999999999999999998 79999999986 48
Q ss_pred CCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCC---------CCCHHHHHHHHHHHHH
Q 024050 82 REKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT---------SVPIEETIGEMKKLVE 152 (273)
Q Consensus 82 r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~---------~~~~~~~~~~L~~l~~ 152 (273)
|+++||+||+++.. .+++.+++++++||+|||+||||+|++|||+. ..+.+++|++|++|++
T Consensus 73 R~~~~i~TK~~~~~---------~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~e~~~al~~l~~ 143 (317)
T 1qwk_A 73 REELFITTKAWTHE---------LAPGKLEGGLRESLKKLQLEYVDLYLAHMPAAFNDDMSEHIASPVEDVWRQFDAVYK 143 (317)
T ss_dssp GGGCEEEEEECTTT---------SSTTTHHHHHHHHHHHHTCSCBSEEEESCSCEECTTSCSEECCCHHHHHHHHHHHHH
T ss_pred hhheEEEeeeCCCc---------CCHHHHHHHHHHHHHHhCCCceeEEEEeccCccccccccccCCCHHHHHHHHHHHHH
Confidence 99999999997532 45788999999999999999999999999975 3478999999999999
Q ss_pred cCCccEEecCCCCHHHHHHHhhc--CCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCC-CCC
Q 024050 153 EGKIKYIGLSEASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVEN-VPA 229 (273)
Q Consensus 153 ~G~ir~iGvS~~~~~~l~~~~~~--~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~-~~~ 229 (273)
+||||+||||||++++++++++. .+++++|++||++.+. .+++++|+++||+|++|+||++|.|+ ++.... .+.
T Consensus 144 ~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~l~-~~~~~~~~~~ 220 (317)
T 1qwk_A 144 AGLAKAVGVSNWNNDQISRALALGLTPVHNSQVELHLYFPQ--HDHVDFCKKHNISVTSYATLGSPGRV-NFTLPTGQKL 220 (317)
T ss_dssp TTSBSSEEEESCCHHHHHHHHTTCSSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCSCCEE-CCBCTTCCBC
T ss_pred cCCeeEEEecCCCHHHHHHHHHhcCCccceecceeccccCc--HHHHHHHHHcCCEEEEecCccCCCcc-cccccccccc
Confidence 99999999999999999999886 3579999999999875 67999999999999999999999876 322111 010
Q ss_pred chhhhh-ccCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 230 DSFLVQ-RREPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 230 ~~~~~~-~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
+.+... ....+.+.++|.++|+|++|+||+|++++| + ++++|
T Consensus 221 ~~~~~~~~~~~~~l~~ia~~~g~s~aqvaL~w~l~~~-~-~vI~g 263 (317)
T 1qwk_A 221 DWAPAPSDLQDQNVLALAEKTHKTPAQVLLRYALDRG-C-AILPK 263 (317)
T ss_dssp CCEECSSGGGCHHHHHHHHHHTCCHHHHHHHHHHHTT-C-EEECC
T ss_pred cccccchhhccHHHHHHHHHHCcCHHHHHHHHHHhCC-C-eEEeC
Confidence 000000 011356789999999999999999999998 3 66665
No 28
>1s1p_A Aldo-keto reductase family 1 member C3; TIM-barrel, oxidoreductase; HET: NAP; 1.20A {Homo sapiens} SCOP: c.1.7.1 PDB: 1s1r_A* 1s2a_A* 1s2c_A* 3uwe_A* 3r58_A* 3r43_A* 3r7m_A* 3r6i_A* 3r8h_A* 3r94_A* 3r8g_A* 1zq5_A* 1ry8_A* 1xf0_A* 1ry0_A* 2f38_A* 2fgb_A* 4dbs_A* 4dbu_A* 3gug_A* ...
Probab=100.00 E-value=3.6e-55 Score=388.54 Aligned_cols=239 Identities=25% Similarity=0.315 Sum_probs=204.0
Q ss_pred cCCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc------
Q 024050 6 HQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------ 79 (273)
Q Consensus 6 ~~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~------ 79 (273)
|++++++| ++|++||.||||||.++. .+.+++.++|++|++.|||+||||+.|| +|+.+|++|++
T Consensus 3 ~~~~~~~L-~tg~~v~~lglGt~~~~~-----~~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~~~ 73 (331)
T 1s1p_A 3 SKQQCVKL-NDGHFMPVLGFGTYAPPE-----VPRSKALEVTKLAIEAGFRHIDSAHLYN---NEEQVGLAIRSKIADGS 73 (331)
T ss_dssp ---CEEEC-TTSCEEESEEEECCCCTT-----SCTTHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTS
T ss_pred CCCCeEEC-CCCCEeCCeeEcCccCCC-----CCHHHHHHHHHHHHHcCCCEEEcccccc---CHHHHHHHHHHHHhcCC
Confidence 67889999 899999999999998642 3678999999999999999999999998 79999999985
Q ss_pred CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCC-------------------CCCH
Q 024050 80 LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT-------------------SVPI 140 (273)
Q Consensus 80 ~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~-------------------~~~~ 140 (273)
.+|+++||+||++... .+++.+++++++||+|||+||||+|++|||+. ..++
T Consensus 74 ~~R~~~~I~TK~~~~~---------~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~d~~g~~~~~~~~~ 144 (331)
T 1s1p_A 74 VKREDIFYTSKLWSTF---------HRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPGEELSPTDENGKVIFDIVDL 144 (331)
T ss_dssp CCGGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCSSCSSCBCTTSCBCBCCCCH
T ss_pred CCchheEEEeccCCcc---------CCHHHHHHHHHHHHHHhCCCcEEEEEeccCcccCCCcccCCccccccccccccCH
Confidence 4899999999997532 56899999999999999999999999999953 2367
Q ss_pred HHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcC----CceEEeeecccccccccccHHHHHHHhCCeEEecccCCCc
Q 024050 141 EETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVH----PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 141 ~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~----~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G 216 (273)
.++|++|++|+++||||+||||||++++++++++.. +|+++|++||++.++ .+++++|+++||+|++|+||++|
T Consensus 145 ~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~v~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G 222 (331)
T 1s1p_A 145 CTTWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNR--SKLLDFCKSKDIVLVAYSALGSQ 222 (331)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTSCC
T ss_pred HHHHHHHHHHHHcCCccEEEEeCCCHHHHHHHHHhcCccCCCceeeeecCCCcCh--HHHHHHHHHcCCEEEEeccccCC
Confidence 899999999999999999999999999999998863 679999999999875 67999999999999999999999
Q ss_pred cCCCCCCCCCCCCchhhhhccCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 217 FFGGKAVVENVPADSFLVQRREPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 217 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.|++ +.....| .. ...+.+.++|.++|+|++|+||+|++++| + ++++|
T Consensus 223 ~l~~-~~~~~~~--~~----~~~~~l~~ia~~~g~s~aqvaL~w~l~~~-~-~vI~g 270 (331)
T 1s1p_A 223 RDKR-WVDPNSP--VL----LEDPVLCALAKKHKRTPALIALRYQLQRG-V-VVLAK 270 (331)
T ss_dssp CCTT-TSCTTSC--CG----GGCHHHHHHHHHHTSCHHHHHHHHHHHTT-C-EEEEE
T ss_pred cccc-cccCCCc--cc----ccCHHHHHHHHHhCCCHHHHHHHHHHhCC-C-EEeeC
Confidence 9875 2211111 11 11356789999999999999999999998 3 55554
No 29
>1zgd_A Chalcone reductase; polyketide, deoxychalcone, isoflavonoid, biosynthesis, plant protein; HET: NAP; 1.70A {Medicago sativa}
Probab=100.00 E-value=2.6e-55 Score=386.61 Aligned_cols=233 Identities=25% Similarity=0.364 Sum_probs=202.8
Q ss_pred CCCccc-CCC-CCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc-----
Q 024050 7 QVPRVK-LGT-QGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ----- 79 (273)
Q Consensus 7 ~m~~r~-lg~-sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~----- 79 (273)
+|++++ ||+ ||++||.|||||+.++. +.+++.++|++|++.|||+||||+.|| ||+.+|++|++
T Consensus 5 ~m~~~~~l~~~tg~~v~~lglGt~~~~~------~~~~~~~~v~~Al~~G~~~iDTA~~Yg---sE~~vG~al~~~~~~g 75 (312)
T 1zgd_A 5 EIPTKVLTNTSSQLKMPVVGMGSAPDFT------CKKDTKDAIIEAIKQGYRHFDTAAAYG---SEQALGEALKEAIELG 75 (312)
T ss_dssp CCCEEECTTSTTCCEEESBCBCCSCCTT------CCSCHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTT
T ss_pred CCchhhhcCCCCCCCCCceeEcCcccCC------CHHHHHHHHHHHHHcCCCEEECccccC---CHHHHHHHHHHHHhcC
Confidence 489999 988 79999999999965432 457899999999999999999999998 89999999985
Q ss_pred -CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCC----------------CCCHHH
Q 024050 80 -LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT----------------SVPIEE 142 (273)
Q Consensus 80 -~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~----------------~~~~~~ 142 (273)
.+|+++||+||++... .+++.+++++++||+|||+||||+|++|||+. ..+.++
T Consensus 76 ~~~R~~~~i~TK~~~~~---------~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~e 146 (312)
T 1zgd_A 76 LVTRDDLFVTSKLWVTE---------NHPHLVIPALQKSLKTLQLDYLDLYLIHWPLSSQPGKFSFPIDVADLLPFDVKG 146 (312)
T ss_dssp SCCGGGCEEEEEECGGG---------CSGGGHHHHHHHHHHHHTCSCBSEEEECCSCEECTTCCCSSEEGGGEECCCHHH
T ss_pred CCcchheEEEeccCCCC---------CCHHHHHHHHHHHHHHhCCCceeEEEEeccCcccCccccccccccccccccHHH
Confidence 3799999999997532 56889999999999999999999999999963 246889
Q ss_pred HHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcC--CceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCC
Q 024050 143 TIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVH--PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGG 220 (273)
Q Consensus 143 ~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~--~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~ 220 (273)
+|++|++|+++||||+||||||++++++++++.. +|+++|++||+++++ .+++++|+++||+|++|+||++|.+.+
T Consensus 147 ~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spl~~G~~~~ 224 (312)
T 1zgd_A 147 VWESMEESLKLGLTKAIGVSNFSVKKLENLLSVATVLPAVNQVEMNLAWQQ--KKLREFCNAHGIVLTAFSPVRKGASRG 224 (312)
T ss_dssp HHHHHHHHHHTTSBSCEEEESCCHHHHHHHHTTCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTTTTTTTS
T ss_pred HHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHhCCCCceEEeeecCcccCC--HHHHHHHHHcCCEEEEecCCCCCCCCC
Confidence 9999999999999999999999999999998874 789999999999985 679999999999999999999887543
Q ss_pred CCCCCCCCCchhhhhccCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 221 KAVVENVPADSFLVQRREPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
. .. ....+.+.++|.++|+|++|+||+|+++++ + ++++|
T Consensus 225 ~---~~---------~~~~~~l~~ia~~~g~s~aqvaL~w~l~~~-~-~~I~g 263 (312)
T 1zgd_A 225 P---NE---------VMENDMLKEIADAHGKSVAQISLRWLYEQG-V-TFVPK 263 (312)
T ss_dssp S---CT---------TTTCHHHHHHHHHHTSCHHHHHHHHHHHTT-C-EECCC
T ss_pred C---cc---------ccccHHHHHHHHHcCCCHHHHHHHHHHHCC-C-EEEeC
Confidence 1 00 011346789999999999999999999996 3 56665
No 30
>3h7u_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.25A {Arabidopsis thaliana}
Probab=100.00 E-value=1e-54 Score=385.98 Aligned_cols=235 Identities=23% Similarity=0.291 Sum_probs=201.2
Q ss_pred ccccCCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc---
Q 024050 3 EEKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--- 79 (273)
Q Consensus 3 ~~~~~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--- 79 (273)
++.|+|++++|+ +|++||.||||||++ +.+++.++|++|+++|||+||||+.|| +|+.+|++|++
T Consensus 20 ~~~~~m~~~~L~-tg~~v~~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---sE~~lG~al~~~~~ 87 (335)
T 3h7u_A 20 HMANAITFFKLN-TGAKFPSVGLGTWQA--------SPGLVGDAVAAAVKIGYRHIDCAQIYG---NEKEIGAVLKKLFE 87 (335)
T ss_dssp ----CCCEEECT-TSCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHHHHH
T ss_pred hhccCCceEEcC-CCCEecceeEeCCcC--------CHHHHHHHHHHHHHcCCCEEECCcccC---CHHHHHHHHHHHHh
Confidence 345689999995 999999999999963 678999999999999999999999999 89999999985
Q ss_pred ---CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCC--------------CCCHHH
Q 024050 80 ---LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT--------------SVPIEE 142 (273)
Q Consensus 80 ---~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~--------------~~~~~~ 142 (273)
.+|+++||+||++... .+++.+++++++||+|||+||||+|++|||+. ..+.++
T Consensus 88 ~g~~~R~~v~I~TK~~~~~---------~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~e 158 (335)
T 3h7u_A 88 DRVVKREDLFITSKLWCTD---------HDPQDVPEALNRTLKDLQLEYVDLYLIHWPARIKKGSVGIKPENLLPVDIPS 158 (335)
T ss_dssp TTSCCGGGCEEEEEECGGG---------CSTTHHHHHHHHHHHHHTCSCBSEEEECSSCEECSSCSSCCGGGEECCCHHH
T ss_pred cCCCCcceeEEEeeeCCCC---------CCHHHHHHHHHHHHHHcCCCceeEEEEcCCCccccccccccccccccCCHHH
Confidence 3899999999997533 56889999999999999999999999999964 246899
Q ss_pred HHHHHHHHHHcCCccEEecCCCCHHHHHHHhhc--CCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCC
Q 024050 143 TIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGG 220 (273)
Q Consensus 143 ~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~--~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~ 220 (273)
+|++|++|+++||||+||||||++++++++++. .+++++|++||++.++ .+++++|+++||+|++|+||++|.+.-
T Consensus 159 ~~~aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~sPL~~g~~~~ 236 (335)
T 3h7u_A 159 TWKAMEALYDSGKARAIGVSNFSTKKLADLLELARVPPAVNQVECHPSWRQ--TKLQEFCKSKGVHLSAYSPLGSPGTTW 236 (335)
T ss_dssp HHHHHHHHHHTTSBSSEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTCCTTCTT
T ss_pred HHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCeEEEecccccccCC--HHHHHHHHHCCCEEEEeccCcCCCCCC
Confidence 999999999999999999999999999998876 4679999999999986 679999999999999999999763221
Q ss_pred CCCCCCCCCchhhhhccCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 221 KAVVENVPADSFLVQRREPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.. .. ....+.+.++|.++|+|++|+||+|++++| .++++|
T Consensus 237 --~~-----~~----~~~~~~l~~iA~~~g~t~aqvaL~w~l~~~--~~vI~g 276 (335)
T 3h7u_A 237 --LK-----SD----VLKNPILNMVAEKLGKSPAQVALRWGLQMG--HSVLPK 276 (335)
T ss_dssp --SC-----CC----GGGCHHHHHHHHHHTCCHHHHHHHHHHHTT--CEECCB
T ss_pred --CC-----cc----ccccHHHHHHHHHHCcCHHHHHHHHHHHCC--CEEEeC
Confidence 00 01 011345789999999999999999999998 456655
No 31
>1mi3_A Xylose reductase, XR; aldo-keto reductase, beta-alpha barrel, dimer, oxidoreductase; HET: NAD; 1.80A {Candida tenuis} SCOP: c.1.7.1 PDB: 1jez_A* 1k8c_A* 1ye6_A* 1ye4_A* 1sm9_A* 1r38_A* 1z9a_A*
Probab=100.00 E-value=1.5e-54 Score=383.41 Aligned_cols=237 Identities=26% Similarity=0.386 Sum_probs=202.0
Q ss_pred cCCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc------
Q 024050 6 HQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------ 79 (273)
Q Consensus 6 ~~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~------ 79 (273)
.+|++++| ++|++||.||||||++ +.+++.++|++|++.|||+||||+.|| +|+.+|++|++
T Consensus 3 ~~m~~~~L-~tg~~v~~lglGt~~~--------~~~~~~~~v~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g~ 70 (322)
T 1mi3_A 3 ASIPDIKL-SSGHLMPSIGFGCWKL--------ANATAGEQVYQAIKAGYRLFDGAEDYG---NEKEVGDGVKRAIDEGL 70 (322)
T ss_dssp -CCCEEEC-TTSCEEESBCEECTTC--------CHHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHHHTTS
T ss_pred CCCceEEC-CCCCEECCeeeeCCcC--------CHHHHHHHHHHHHHcCCCEEEcccccc---CHHHHHHHHHHHhhcCC
Confidence 45899999 8999999999999863 689999999999999999999999998 79999999985
Q ss_pred CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCC-----------------------
Q 024050 80 LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT----------------------- 136 (273)
Q Consensus 80 ~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~----------------------- 136 (273)
.+|+++||+||++... .+++.+++++++||+|||+||||+|++|||+.
T Consensus 71 ~~R~~~~i~TK~~~~~---------~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~d~~~~~~~~~~ 141 (322)
T 1mi3_A 71 VKREEIFLTSKLWNNY---------HDPKNVETALNKTLADLKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFV 141 (322)
T ss_dssp CCGGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCCCTTTCSSCTTCCSSTTCCC
T ss_pred CChhhEEEEEeeCCCC---------CCHHHHHHHHHHHHHHhCCCCeeeEEEecCcccccCccccccccccccccccccc
Confidence 4899999999997532 56899999999999999999999999999952
Q ss_pred --CCCHHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhc--CCceEEeeecccccccccccHHHHHHHhCCeEEeccc
Q 024050 137 --SVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSP 212 (273)
Q Consensus 137 --~~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~--~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~sp 212 (273)
..+++++|++|++|+++||||+||||||++++++++++. .+++++|++||++.++ .+++++|+++||+|++|+|
T Consensus 142 ~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~sp 219 (322)
T 1mi3_A 142 YEDVPILETWKALEKLVAAGKIKSIGVSNFPGALLLDLLRGATIKPAVLQVEHHPYLQQ--PKLIEFAQKAGVTITAYSS 219 (322)
T ss_dssp BCCCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEEECT
T ss_pred ccCCCHHHHHHHHHHHHHcCCcCEEEEcCCCHHHHHHHHHhCCCCceEeecccCcCcCc--HHHHHHHHHcCCEEEEECC
Confidence 236789999999999999999999999999999999876 4689999999999875 6799999999999999999
Q ss_pred CCCccCCCCCCC-C-CCCCchhhhhccCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 213 LGRGFFGGKAVV-E-NVPADSFLVQRREPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 213 l~~G~L~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
|++|.+...... . ..|. ....+.+.++|.++|+|++|+||+|++++| + ++++|
T Consensus 220 L~~G~~~~~~~~~~~~~~~------~~~~~~l~~iA~~~g~t~aqvaL~w~l~~~-~-~vI~g 274 (322)
T 1mi3_A 220 FGPQSFVEMNQGRALNTPT------LFAHDTIKAIAAKYNKTPAEVLLRWAAQRG-I-AVIPK 274 (322)
T ss_dssp TTTHHHHTTTCHHHHTSCC------TTSCHHHHHHHHHHTCCHHHHHHHHHHTTT-C-EECCC
T ss_pred CCCCCcccccccccccCcc------cccCHHHHHHHHHcCCCHHHHHHHHHHhCC-C-EEEcC
Confidence 999943211000 0 0000 112356789999999999999999999998 3 67765
No 32
>3o3r_A Aldo-keto reductase family 1, member B7; aldose reductase like protein, AKR1B14, oxidoreductase; HET: NAP; 1.86A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 3qkz_A*
Probab=100.00 E-value=4.8e-54 Score=379.21 Aligned_cols=233 Identities=24% Similarity=0.335 Sum_probs=199.6
Q ss_pred CCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc------CC
Q 024050 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------LP 81 (273)
Q Consensus 8 m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~------~~ 81 (273)
|++.+| +||++||.||||||++ +.+++.++|++|+++|||+||||+.|| +|+.+|++|++ .+
T Consensus 2 ~~~~~l-~tg~~v~~lglGt~~~--------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~~~~~ 69 (316)
T 3o3r_A 2 TTFVKL-RTKAKMPLVGLGTWKS--------PPGQVKEAVKAAIDAGYRHFDCAYVYQ---NESEVGEAIQEKIKEKAVR 69 (316)
T ss_dssp CCEEEC-TTSCEEESBEEBCTTC--------CTTHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHHHTTSCC
T ss_pred CCeEEC-CCCCEeCCeeeECCcC--------CcHHHHHHHHHHHHcCCCEEEccCccC---CHHHHHHHHHHHHhhCCCC
Confidence 456788 8999999999999864 467899999999999999999999998 79999999985 58
Q ss_pred CCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCC-------------------CCCCHHH
Q 024050 82 REKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVD-------------------TSVPIEE 142 (273)
Q Consensus 82 r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~-------------------~~~~~~~ 142 (273)
|+++||+||+++.. .+++.+++++++||+|||+||||+|++|||+ ...++++
T Consensus 70 R~~v~I~TK~~~~~---------~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e 140 (316)
T 3o3r_A 70 REDLFIVSKLWSTF---------FEKSLMKEAFQKTLSDLKLDYLDLYLIHWPQGLQAGKEFLPKDSQGKVLMSKSTFLD 140 (316)
T ss_dssp GGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEESCSSCBCCSSCSSCBCTTSCBCBCSCCHHH
T ss_pred hHHcEEEeeeCCCc---------CCHHHHHHHHHHHHHHcCCCeeeEEEEcCCccccCcccccccccccccccccccHHH
Confidence 99999999997543 4689999999999999999999999999996 3467899
Q ss_pred HHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcC----CceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccC
Q 024050 143 TIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVH----PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFF 218 (273)
Q Consensus 143 ~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~----~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L 218 (273)
+|++|++|+++||||+||||||++++++++++.. +++++|++||++.++ .+++++|+++||+|++|+||++|..
T Consensus 141 ~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a~spL~~G~~ 218 (316)
T 3o3r_A 141 AWEGMEELVDQGLVKALGVSNFNHFQIERLLNKPGLKHKPVTNQVECHPYLTQ--EKLIQYCHSKGIAVIAYSPLGSPDR 218 (316)
T ss_dssp HHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCCEEEEECBTTBCC--HHHHHHHHTTTCEEEEECTTCCTTC
T ss_pred HHHHHHHHHHcCCCcEEEEecCCHHHHHHHHHhCCCCCCceEeeccCCcccch--HHHHHHHHHcCCEEEEecccCCCCC
Confidence 9999999999999999999999999999998753 489999999999874 7899999999999999999999832
Q ss_pred CCCCCCCCCCCchhhhhccCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 219 GGKAVVENVPADSFLVQRREPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
. +.. +... .....+.+.++|.++|+|++|+||+|++++|.+ +++|
T Consensus 219 ~--~~~---~~~~---~~~~~~~l~~ia~~~g~t~aqvaL~w~l~~~~~--vi~g 263 (316)
T 3o3r_A 219 P--YAK---PEDP---VVLEIPKIKEIAAKHKKTIAQVLIRFHVQRNVA--VIPK 263 (316)
T ss_dssp T--TCC---TTSC---CSTTCHHHHHHHHHHTCCHHHHHHHHHHTTTCE--ECCB
T ss_pred c--ccc---ccch---hhhcCHHHHHHHHHhCCCHHHHHHHHHHhCCCE--EeCC
Confidence 1 111 1000 011235678999999999999999999999853 5554
No 33
>1us0_A Aldose reductase; oxidoreductase, NADP, IDD594; HET: NDP LDT CIT; 0.66A {Homo sapiens} SCOP: c.1.7.1 PDB: 1pwl_A* 1t41_A* 1pwm_A* 1x96_A* 1x97_A* 1x98_A* 1z89_A* 1z8a_A* 2dux_A* 2duz_A* 2dv0_A* 2fz8_A* 2fz9_A* 2fzb_A* 2fzd_A* 2hv5_A* 2hvn_A* 2hvo_A* 2i16_A* 2i17_A* ...
Probab=100.00 E-value=8.9e-54 Score=377.49 Aligned_cols=233 Identities=25% Similarity=0.356 Sum_probs=201.2
Q ss_pred CCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc------CC
Q 024050 8 VPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------LP 81 (273)
Q Consensus 8 m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~------~~ 81 (273)
+++++| ++|++||.||||||++ +.+++.++|++|+++|||+||||+.|| +|+.+|++|++ .+
T Consensus 2 ~~~~~l-~tg~~v~~lglGt~~~--------~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g~~~ 69 (316)
T 1us0_A 2 ASRILL-NNGAKMPILGLGTWKS--------PPGQVTEAVKVAIDVGYRHIDCAHVYQ---NENEVGVAIQEKLREQVVK 69 (316)
T ss_dssp CSEEEC-TTSCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSSC
T ss_pred CceEEC-CCCCEECCEeEECCcC--------CHHHHHHHHHHHHHcCCCEEEcccccC---CHHHHHHHHHHHHhcCCCC
Confidence 357889 8999999999999862 689999999999999999999999998 79999999985 47
Q ss_pred CCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCC-------------------CCCHHH
Q 024050 82 REKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT-------------------SVPIEE 142 (273)
Q Consensus 82 r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~-------------------~~~~~~ 142 (273)
|+++||+||++... .+++.+++++++||+|||+||||+|++|||+. ..++++
T Consensus 70 R~~~~I~TK~~~~~---------~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e 140 (316)
T 1us0_A 70 REELFIVSKLWCTY---------HEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILD 140 (316)
T ss_dssp GGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCBSEEEESSSCCBCCSSCSSCBCTTSCBCBCSCCHHH
T ss_pred hhHeEEEEeeCCCc---------CCHHHHHHHHHHHHHHhCCCceeeEEEecCccccccccccccccccccccccccHHH
Confidence 99999999997532 56899999999999999999999999999963 236789
Q ss_pred HHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcC----CceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccC
Q 024050 143 TIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVH----PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFF 218 (273)
Q Consensus 143 ~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~----~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L 218 (273)
+|++|++|+++||||+||||||++++++++++.. +|+++|++||++.++ .+++++|+++||+|++|+||++|.|
T Consensus 141 ~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~l 218 (316)
T 1us0_A 141 TWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKPAVNQIECHPYLTQ--EKLIQYCQSKGIVVTAYSPLGSPDR 218 (316)
T ss_dssp HHHHHHHHHHTTSBSCEEEESCCHHHHHHHHTCTTCCSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCCTTC
T ss_pred HHHHHHHHHHCCCccEEEEecCCHHHHHHHHHhCcccCCceeeehhcCCccCC--HHHHHHHHHcCCEEEEecccccCcc
Confidence 9999999999999999999999999999998863 569999999999875 6799999999999999999999987
Q ss_pred CCCCCCCCCCCchhhhhccCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 219 GGKAVVENVPADSFLVQRREPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
. +.....|. ....+.+.++|.++|+|++|+||+|++++| + ++++|
T Consensus 219 ~--~~~~~~~~------~~~~~~l~~ia~~~g~s~aqvaL~w~l~~~-~-~~I~g 263 (316)
T 1us0_A 219 P--WAKPEDPS------LLEDPRIKAIAAKHNKTTAQVLIRFPMQRN-L-VVIPK 263 (316)
T ss_dssp T--TCCTTSCC------TTTCHHHHHHHHHHTCCHHHHHHHHHHHTT-C-EECCB
T ss_pred c--cccCCCcc------cccCHHHHHHHHHhCCCHHHHHHHHHHHCC-C-EEEeC
Confidence 3 11111010 112356789999999999999999999998 3 66665
No 34
>1mzr_A 2,5-diketo-D-gluconate reductase A; alpha/beta-barrel, aldo-ketoreductase, NADPH dependant, BACT targets at IGS-CNRS, france, BIGS; 2.13A {Escherichia coli} SCOP: c.1.7.1
Probab=100.00 E-value=3.9e-54 Score=375.47 Aligned_cols=225 Identities=26% Similarity=0.286 Sum_probs=199.2
Q ss_pred cCCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--CCCC
Q 024050 6 HQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPRE 83 (273)
Q Consensus 6 ~~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~~r~ 83 (273)
+.|++++| ++|++||+||||||++ +.+++.++|+.|++.|||+||||+.|| +|+.+|++|++ .+|+
T Consensus 23 ~~~~~~~L-~tg~~vs~lglGt~~~--------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg---~E~~vG~al~~~~~~R~ 90 (296)
T 1mzr_A 23 ANPTVIKL-QDGNVMPQLGLGVWQA--------SNEEVITAIQKALEVGYRSIDTAAAYK---NEEGVGKALKNASVNRE 90 (296)
T ss_dssp CCCCEEEC-TTSCEEESBCEECCSC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHSCSCGG
T ss_pred CCCceEEC-CCCCeeCCEeEECCCC--------CHHHHHHHHHHHHHcCCCEEECCcccc---CHHHHHHHHHhcCCCcc
Confidence 46999999 7999999999999975 368999999999999999999999998 79999999985 5799
Q ss_pred CEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCC-CCCHHHHHHHHHHHHHcCCccEEecC
Q 024050 84 KIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT-SVPIEETIGEMKKLVEEGKIKYIGLS 162 (273)
Q Consensus 84 ~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~-~~~~~~~~~~L~~l~~~G~ir~iGvS 162 (273)
++||+||++... . +.+++++++||+|||+||||+|++|||+. ..+..++|++|++|+++||||+||||
T Consensus 91 ~v~I~TK~~~~~---------~--~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~e~~~al~~l~~~Gkir~iGvS 159 (296)
T 1mzr_A 91 ELFITTKLWNDD---------H--KRPREALLDSLKKLQLDYIDLYLMHWPVPAIDHYVEAWKGMIELQKEGLIKSIGVC 159 (296)
T ss_dssp GCEEEEEECGGG---------T--TCHHHHHHHHHHHHTCSCEEEEEESCCCTTTCCHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred cEEEEeccCCCc---------H--HHHHHHHHHHHHHhCCCcEEEEEEccCCCCcCCHHHHHHHHHHHHHCCCcCEEEEe
Confidence 999999997532 2 67999999999999999999999999987 47789999999999999999999999
Q ss_pred CCCHHHHHHHhhc--CCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhhccCch
Q 024050 163 EASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRREPG 240 (273)
Q Consensus 163 ~~~~~~l~~~~~~--~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~ 240 (273)
||++++++++++. .++.++|++||+++++ .+++++|+++||++++|+||++|.+. . ...+
T Consensus 160 n~~~~~l~~~~~~~~~~p~v~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~~~-------~---------l~~~ 221 (296)
T 1mzr_A 160 NFQIHHLQRLIDETGVTPVINQIELHPLMQQ--RQLHAWNATHKIQTESWSPLAQGGKG-------V---------FDQK 221 (296)
T ss_dssp SCCHHHHHHHHHHHSCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTTTTCTT-------T---------TTSH
T ss_pred CCCHHHHHHHHHhcCCCceEEeeecccccCC--HHHHHHHHHCCCeEEEeccccCCcch-------h---------cChH
Confidence 9999999998865 5678999999999986 57999999999999999999999531 0 0123
Q ss_pred hHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 241 QEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 241 ~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.+.++|.++|++++|+||+|+++++ + ++++|
T Consensus 222 ~l~~ia~~~g~s~aqvaL~w~l~~~-v-~vI~g 252 (296)
T 1mzr_A 222 VIRDLADKYGKTPAQIVIRWHLDSG-L-VVIPK 252 (296)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHTT-C-EECCB
T ss_pred HHHHHHHHhCCCHHHHHHHHHHhCC-C-EEEeC
Confidence 5778999999999999999999996 3 46665
No 35
>3b3d_A YTBE protein, putative morphine dehydrogenase; aldo-keto reductase, oxidoreductase; 2.30A {Bacillus subtilis}
Probab=100.00 E-value=1.1e-53 Score=376.11 Aligned_cols=224 Identities=23% Similarity=0.359 Sum_probs=199.6
Q ss_pred CcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc------CCC
Q 024050 9 PRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------LPR 82 (273)
Q Consensus 9 ~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~------~~r 82 (273)
.+++| ++|++||.||||||+++ +.+++.++|++|+++|||+||||+.|| +|+.+|++++. .+|
T Consensus 41 ~~~TL-n~G~~ip~lGlGt~~~~-------d~~e~~~~v~~Al~~Gi~~~DTA~~Yg---nE~~vG~~l~~~~~~~~i~r 109 (314)
T 3b3d_A 41 AKATL-HNGVEMPWFGLGVFQVE-------EGSELVNAVKTAIVHGYRSIDTAAIYG---NEAGVGEGIREGIEEAGISR 109 (314)
T ss_dssp CEEEC-TTSCEEESBCEECCSCC-------CSHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHHHTCCG
T ss_pred CcEEC-CCcCcccceeEECCCCC-------CHHHHHHHHHHHHHcCCCEEECccccC---ChHHHHHHHHHHHHHhCCCc
Confidence 35778 89999999999999865 468899999999999999999999998 89999998874 689
Q ss_pred CCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecC
Q 024050 83 EKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS 162 (273)
Q Consensus 83 ~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS 162 (273)
+++++.||++... .+++.+++++++||+|||+||||+|++|+|+. .+..++|++|++|+++||||+||||
T Consensus 110 ~~~~i~~k~~~~~---------~~~~~~~~~~e~SL~rL~~dyiDL~~~H~~~~-~~~~e~~~al~~l~~~Gkir~iGvS 179 (314)
T 3b3d_A 110 EDLFITSKVWNAD---------LGYEETLAAFETSLSKLGLDYLDLYLIHWPVE-GKYKEAWRALETLYKEGRIKAIGVS 179 (314)
T ss_dssp GGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEESSCCT-TTHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred ccccccccCcCCC---------CCHHHHHHHHHHHHHHhCCCcccccccccccc-cchhHHHHHHHHHHHCCCEeEEEec
Confidence 9999999987544 57999999999999999999999999999976 5678999999999999999999999
Q ss_pred CCCHHHHHHHhhcCCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhhccCchhH
Q 024050 163 EASPGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRREPGQE 242 (273)
Q Consensus 163 ~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~~~ 242 (273)
||++++++++.+..++.++|++|++..+..+.+++++|+++||++++|+||++|.|+++. ..
T Consensus 180 n~~~~~l~~~~~~~~i~~~~nq~~~~~~~~~~~ll~~c~~~gI~v~a~sPL~~G~L~~~~------------------~~ 241 (314)
T 3b3d_A 180 NFQIHHLEDLMTAAEIKPMINQVEFHPRLTQKELIRYCQNQGIQMEAWSPLMQGQLLDHP------------------VL 241 (314)
T ss_dssp SCCHHHHHHHTTTCSSCCSEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTGGGTTTTCH------------------HH
T ss_pred CCchHHHHHHHHhcCCCeEEEEeccccccchHHHHHHHHHcCCEEEEeccccCCcccCch------------------hh
Confidence 999999999998877777777777777766788999999999999999999999998631 23
Q ss_pred HHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 243 QEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 243 ~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.+++.++++|++|+||+|++++|.| +++|
T Consensus 242 ~~ia~~~g~t~aqvaL~w~l~~~~v--~I~G 270 (314)
T 3b3d_A 242 ADIAQTYNKSVAQIILRWDLQHGII--TIPK 270 (314)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHTTCE--ECCB
T ss_pred HHHHHHcCCCHHHHHHHHHHhCCCE--EEEC
Confidence 5789999999999999999999987 4554
No 36
>3h7r_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.40A {Arabidopsis thaliana}
Probab=100.00 E-value=6.9e-54 Score=379.91 Aligned_cols=230 Identities=24% Similarity=0.315 Sum_probs=197.6
Q ss_pred cccCCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc----
Q 024050 4 EKHQVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ---- 79 (273)
Q Consensus 4 ~~~~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~---- 79 (273)
+.|.|++++| ++|++||+||||||+ ++.++|++|+++|||+||||+.|| +|+.+|++|++
T Consensus 21 ~~~~m~~~~L-~tg~~vs~lglGt~~------------~~~~~v~~Al~~Gi~~~DTA~~Yg---sE~~lG~al~~~~~~ 84 (331)
T 3h7r_A 21 MAAPIRFFEL-NTGAKLPCVGLGTYA------------MVATAIEQAIKIGYRHIDCASIYG---NEKEIGGVLKKLIGD 84 (331)
T ss_dssp ----CCEEEC-TTSCEEESBEEECTT------------CCHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHHHHHT
T ss_pred cccCCcEEEC-CCCCEecCEeeccHH------------HHHHHHHHHHHcCCCEEECccccC---CHHHHHHHHHHHhhc
Confidence 3457999999 799999999999984 578999999999999999999999 89999999985
Q ss_pred --CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCC--------------CCCHHHH
Q 024050 80 --LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT--------------SVPIEET 143 (273)
Q Consensus 80 --~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~--------------~~~~~~~ 143 (273)
.+|+++||+||++... .+++.+++++++||+|||+||||+|++|||+. ..+.+++
T Consensus 85 g~~~R~~v~I~TK~~~~~---------~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~e~ 155 (331)
T 3h7r_A 85 GFVKREELFITSKLWSND---------HLPEDVPKALEKTLQDLQIDYVDLYLIHWPASLKKESLMPTPEMLTKPDITST 155 (331)
T ss_dssp TSSCGGGCEEEEEECGGG---------CSTTHHHHHHHHHHHHHTCSCBSEEEECCSCEECTTCSSCCGGGEECCCHHHH
T ss_pred CCCCchhEEEEEeeCCCC---------CCHHHHHHHHHHHHHHcCCCeeEEEEEecCcccccccccccccccccCCHHHH
Confidence 3899999999997533 56889999999999999999999999999964 3568999
Q ss_pred HHHHHHHHHcCCccEEecCCCCHHHHHHHhhc--CCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCC
Q 024050 144 IGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGK 221 (273)
Q Consensus 144 ~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~--~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~ 221 (273)
|++|++|+++||||+||||||++++++++++. .+++++|++||++.++ .+++++|+++||+|++|+||++|-..
T Consensus 156 ~~aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~g~~~-- 231 (331)
T 3h7r_A 156 WKAMEALYDSGKARAIGVSNFSSKKLTDLLNVARVTPAVNQVECHPVWQQ--QGLHELCKSKGVHLSGYSPLGSQSKG-- 231 (331)
T ss_dssp HHHHHHHHHTTSBSSEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTSCSCTT--
T ss_pred HHHHHHHHHcCCCcEEEecCCCHHHHHHHHHhcCCCceeEEeecccccCC--HHHHHHHHHCCCEEEEeCCCCCCCCC--
Confidence 99999999999999999999999999998876 4689999999999886 68999999999999999999976211
Q ss_pred CCCCCCCCchhhhhccCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 222 AVVENVPADSFLVQRREPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
..... ....+.+.++|.+++++++|+||+|++++| .++++|
T Consensus 232 -----~~~~~----~~~~~~l~~iA~~~g~t~aqvaL~w~l~~~--~~vI~g 272 (331)
T 3h7r_A 232 -----EVRLK----VLQNPIVTEVAEKLGKTTAQVALRWGLQTG--HSVLPK 272 (331)
T ss_dssp -----TTTHH----HHTCHHHHHHHHHHTCCHHHHHHHHHHHTT--CEECCC
T ss_pred -----CCccc----hhcCHHHHHHHHHHCcCHHHHHHHHHHHCC--CEEEeC
Confidence 00111 122456789999999999999999999998 456665
No 37
>1vp5_A 2,5-diketo-D-gluconic acid reductase; TM1009, structural genomics, joint center for structural genomics, PSI, protein structure initiative; HET: NAP; 2.40A {Thermotoga maritima} SCOP: c.1.7.1
Probab=100.00 E-value=1.9e-53 Score=371.47 Aligned_cols=223 Identities=23% Similarity=0.309 Sum_probs=197.5
Q ss_pred CcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc------CCC
Q 024050 9 PRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------LPR 82 (273)
Q Consensus 9 ~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~------~~r 82 (273)
+.+.+|++|++||.||||||++ +.+++.++|+.|++.|||+||||+.|| +|+.+|++|++ .+|
T Consensus 15 ~~~~~~~tg~~v~~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~vG~al~~~~~~~~~~R 83 (298)
T 1vp5_A 15 VPKVTLNNGVEMPILGYGVFQI--------PPEKTEECVYEAIKVGYRLIDTAASYM---NEEGVGRAIKRAIDEGIVRR 83 (298)
T ss_dssp CCEEECTTSCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSCCG
T ss_pred CceEeCCCCCCccCeeEeCCcC--------ChHHHHHHHHHHHHcCCCEEECCCccc---CHHHHHHHHHHhhhccCCCh
Confidence 3578899999999999999975 358899999999999999999999998 79999999984 379
Q ss_pred CCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecC
Q 024050 83 EKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS 162 (273)
Q Consensus 83 ~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS 162 (273)
+++||+||+++. +.+++.+++++++||+|||+||||+|++|||+. +..++|++|++|+++||||+||||
T Consensus 84 ~~v~I~TK~~~~---------~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~--~~~e~~~al~~l~~~Gkir~iGvS 152 (298)
T 1vp5_A 84 EELFVTTKLWVS---------DVGYESTKKAFEKSLKKLQLEYIDLYLIHQPFG--DVHCAWKAMEEMYKDGLVRAIGVS 152 (298)
T ss_dssp GGCEEEEEECGG---------GCSSHHHHHHHHHHHHHHTCSCEEEEEECSSCS--CHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred hhEEEEeccCCC---------CCCHHHHHHHHHHHHHHHCCCcEEEEEecCCCC--CHHHHHHHHHHHHHcCCccEEEec
Confidence 999999999753 256899999999999999999999999999986 789999999999999999999999
Q ss_pred CCCHHHHHHHhhc--CCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCCCCCCCCCCchhhhhccCch
Q 024050 163 EASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGKAVVENVPADSFLVQRREPG 240 (273)
Q Consensus 163 ~~~~~~l~~~~~~--~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~~~~~~~~~~~~~~~~~~~~ 240 (273)
||++++++++++. .+|+++|++||+++++ .+++++|+++||++++|+||++|. ++ ....+
T Consensus 153 n~~~~~l~~~~~~~~~~p~v~Q~~~~~~~~~--~~l~~~~~~~gI~v~a~spL~~G~--~~--------------~l~~~ 214 (298)
T 1vp5_A 153 NFYPDRLMDLMVHHEIVPAVNQIEIHPFYQR--QEEIEFMRNYNIQPEAWGPFAEGR--KN--------------IFQNG 214 (298)
T ss_dssp SCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTGGGG--GG--------------GGGCH
T ss_pred CCCHHHHHHHHHhCCCCceEEEEecccccCC--HHHHHHHHHCCCEEEEecccccCC--cc--------------ccCcH
Confidence 9999999999886 4569999999999986 579999999999999999999984 10 00123
Q ss_pred hHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 241 QEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 241 ~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
.+.++|.++|+|++|+||+|++++|. ++++|
T Consensus 215 ~l~~ia~~~g~s~aqvaL~w~l~~~v--~vI~g 245 (298)
T 1vp5_A 215 VLRSIAEKYGKTVAQVILRWLTQKGI--VAIPK 245 (298)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHTTC--EECCC
T ss_pred HHHHHHHHhCCCHHHHHHHHHHhCCC--EEEeC
Confidence 57789999999999999999999974 56665
No 38
>3krb_A Aldose reductase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, oxidoreductase, S genomics; HET: NAP; 1.75A {Giardia lamblia}
Probab=100.00 E-value=3.1e-53 Score=376.42 Aligned_cols=237 Identities=24% Similarity=0.358 Sum_probs=193.7
Q ss_pred CCCcccCC-CCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHh-------
Q 024050 7 QVPRVKLG-TQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALK------- 78 (273)
Q Consensus 7 ~m~~r~lg-~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~------- 78 (273)
|++.+++| .||.+||.||||||++ +.+++.++|++|++.|||+||||+.|| ||+.+|++|+
T Consensus 11 ~~~~~~~~~~tg~~vp~lGlGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---sE~~vG~al~~~~~~~~ 79 (334)
T 3krb_A 11 TLEAQTQGPGSMQYPPRLGFGTWQA--------PPEAVQTAVETALMTGYRHIDCAYVYQ---NEEAIGRAFGKIFKDAS 79 (334)
T ss_dssp ----------CCSSCCSBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHHHHHCTT
T ss_pred ceecCCcCCCCCCccCCeeeeCCCC--------CHHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHHhhhcc
Confidence 44555554 5699999999999873 689999999999999999999999999 8999999998
Q ss_pred -cCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCC--------------C------
Q 024050 79 -QLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT--------------S------ 137 (273)
Q Consensus 79 -~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~--------------~------ 137 (273)
..+|+++||+||++... .+++.+++++++||+|||+||||+|++|+|+. +
T Consensus 80 ~g~~R~~v~I~TK~~~~~---------~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~d~~g~~~~~ 150 (334)
T 3krb_A 80 SGIKREDVWITSKLWNYN---------HRPELVREQCKKTMSDLQVDYLDLFLVHWPLAFVRNDVGDLFPKDAEGRAMLE 150 (334)
T ss_dssp SSCCGGGCEEEEEECGGG---------CSGGGHHHHHHHHHHHHTCSCEEEEEECCSCCBCCCTTCCSSCBCTTSCBCBC
T ss_pred CCCChhhEEEEeeeCCCC---------CCHHHHHHHHHHHHHHcCCCceeEEEEccccccccccccccCccccccccccc
Confidence 34899999999997543 56889999999999999999999999999943 1
Q ss_pred -CCHHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcC--CceEEeeecccccccccccHHHHHHHhCCeEEecccCC
Q 024050 138 -VPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVH--PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLG 214 (273)
Q Consensus 138 -~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~--~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~ 214 (273)
.+++++|++|++|+++||||+||||||++++++++++.. +++++|++||++.++ .+++++|+++||++++|+||+
T Consensus 151 ~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~c~~~gI~v~ayspL~ 228 (334)
T 3krb_A 151 KVPLADTWRAMEQLVEEGLVKHIGVSNYTVPLLADLLNYAKIKPLVNQIEIHPWHPN--DATVKFCLDNGIGVTAYSPMG 228 (334)
T ss_dssp CCCHHHHHHHHHHHHHHTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTC
T ss_pred CCCHHHHHHHHHHHHHcCCccEEEEecCCHHHHHHHHHhCCCceEEeeeecCccccc--HHHHHHHHHcCCEEEEEecCC
Confidence 468899999999999999999999999999999998874 789999999999885 789999999999999999999
Q ss_pred CccCCCCCCCCCCCCchhhhhccCchhHHHHHHhcCCChHHHHH-----HhhhcCCCcccccCC
Q 024050 215 RGFFGGKAVVENVPADSFLVQRREPGQEQEYLFSHREPCQKVQL-----HFCSTSPSMGSRTGG 273 (273)
Q Consensus 215 ~G~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~aL-----~~~l~~p~v~s~~~g 273 (273)
+|+|++++....... .....+.+.++|.++|+|++|+|| +|+++ . .++++|
T Consensus 229 ~G~L~~~~~~~~~~~-----~~~~~~~l~~iA~~~g~s~aqvaLaw~~~~w~l~-~--~~vI~g 284 (334)
T 3krb_A 229 GSYADPRDPSGTQKN-----VILECKTLKAIADAKGTSPHCVALAWHVKKWNTS-M--YSVIPK 284 (334)
T ss_dssp CSBC-------CCBC-----GGGGCHHHHHHHHHHTSCHHHHHHHHHHHHSCST-T--EEECCB
T ss_pred CCcccCCCCCCCccc-----chhccHHHHHHHHHhCcCHHHhHHhhHhhhhhcC-C--eEEeeC
Confidence 999998743221100 111245678999999999999999 77777 2 556654
No 39
>4gac_A Alcohol dehydrogenase [NADP(+)]; TIM barrel, aldheyde reductase AKR1A4, SMAR1, oxidoreductase; HET: FLC; 1.64A {Mus musculus} PDB: 2alr_A 3h4g_A* 3cv7_A* 3fx4_A* 1ae4_A* 1cwn_A* 1hqt_A*
Probab=100.00 E-value=1e-52 Score=372.14 Aligned_cols=234 Identities=27% Similarity=0.375 Sum_probs=203.0
Q ss_pred CCCcccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc-------
Q 024050 7 QVPRVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ------- 79 (273)
Q Consensus 7 ~m~~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~------- 79 (273)
|.+++.| +||++||.||||||++ +++++.++|++|+++|||+||||+.|| ||+.+|++|++
T Consensus 1 t~~~v~L-ntG~~vp~iGlGtw~~--------~~~~a~~~i~~Al~~Gin~~DTA~~Yg---sE~~vG~al~~~~~~~~~ 68 (324)
T 4gac_A 1 TASSVLL-HTGQKMPLIGLGTWKS--------EPGQVKAAIKHALSAGYRHIDCASVYG---NETEIGEALKESVGSGKA 68 (324)
T ss_dssp CCCEEEC-TTSCEEESBCEECTTC--------CHHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHBSTTSS
T ss_pred CCCeEEC-CCCCEeccceeECCCC--------CHHHHHHHHHHHHHcCCCEEECCcccC---CHHHHHHHHHhhhcccce
Confidence 3567788 9999999999999863 689999999999999999999999998 89999999985
Q ss_pred CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCC-------------------CCCH
Q 024050 80 LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT-------------------SVPI 140 (273)
Q Consensus 80 ~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~-------------------~~~~ 140 (273)
..|+++++.+|++... .+++.+++++++||+|||+||||+|++|||+. ..++
T Consensus 69 ~~r~~~~~~~~~~~~~---------~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (324)
T 4gac_A 69 VPREELFVTSKLWNTK---------HHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNADGTVRYDSTHY 139 (324)
T ss_dssp BCGGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCBSEEEESCSSEECSSSCSSCBCTTSCBCEECCCH
T ss_pred ecccccccccccCCCC---------CCHHHHHHHHHHHHHHhCCCccceeeeccCcccccccccccccccCccccCCCCH
Confidence 4688999999986543 56899999999999999999999999999963 3568
Q ss_pred HHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhc--CCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccC
Q 024050 141 EETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFF 218 (273)
Q Consensus 141 ~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~--~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L 218 (273)
+++|++|++|+++||||+||||||++++++++... ..+.++|++|+++..+ .+++++|+++||++++|+||++|.+
T Consensus 140 ~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~--~~l~~~~~~~gi~~~a~spL~~g~~ 217 (324)
T 4gac_A 140 KETWKALEVLVAKGLVKALGLSNFNSRQIDDVLSVASVRPAVLQVECHPYLAQ--NELIAHCHARGLEVTAYSPLGSSDR 217 (324)
T ss_dssp HHHHHHHHHHHHTTSBSCEEEESCCHHHHHHHHHHCSSCCCEEEEECBTTBCC--HHHHHHHHHHTCEEEEESTTCCGGG
T ss_pred HHHHHHHHHHHHCCCeeEecCCCCCHHHHHHHHHhCCCCcceeeeccCchhhH--HHHHHHHHHhceeeeecCCcccCcc
Confidence 99999999999999999999999999999998876 4568899999988764 6799999999999999999999999
Q ss_pred CCCCCCCCCCCchhhhhccCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 219 GGKAVVENVPADSFLVQRREPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
++++..... ......+.++|.++|+|++|+||+|++++|.| +++|
T Consensus 218 ~~~~~~~~~--------~~~~~~l~~iA~~~g~t~aqvaL~w~l~~~~v--~I~G 262 (324)
T 4gac_A 218 AWRHPDEPV--------LLEEPVVLALAEKHGRSPAQILLRWQVQRKVI--CIPK 262 (324)
T ss_dssp GGGSTTSCC--------GGGCHHHHHHHHHHTCCHHHHHHHHHHHTTCE--ECCB
T ss_pred ccCCCCCcc--------hhhHHHHHHHHHHhCCCHHHHHHHHHHHCCCE--EEEC
Confidence 987433211 01123577899999999999999999999976 4554
No 40
>2bgs_A Aldose reductase; holoenzyme, aldo/keto reductase, oxidoreductase; HET: NDP; 1.64A {Hordeum vulgare} PDB: 2bgq_A* 2vdg_A*
Probab=100.00 E-value=4.8e-53 Score=375.84 Aligned_cols=226 Identities=27% Similarity=0.381 Sum_probs=196.0
Q ss_pred cCCC-cccCCCCCcccCcceeccccCCCCCCCCCCHHHHHHHHHHHHH-CCCCccccccCCCCCcHHHHHHHHHhc----
Q 024050 6 HQVP-RVKLGTQGLEVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFS-KGITFFDTADVYGQNANEVLLGKALKQ---- 79 (273)
Q Consensus 6 ~~m~-~r~lg~sg~~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~-~Gin~~DtA~~Yg~g~se~~lg~~l~~---- 79 (273)
|+|+ +++| ++|++||.||||||+. + +++.++|+.|++ .|||+||||+.|| +|+.+|++|++
T Consensus 34 ~~m~~~~~L-~tg~~vp~lglGt~~~--------~-~~~~~~l~~Al~~~Gi~~iDTA~~Yg---~E~~vG~al~~~~~~ 100 (344)
T 2bgs_A 34 QGEQDHFVL-KSGHAMPAVGLGTWRA--------G-SDTAHSVRTAITEAGYRHVDTAAEYG---VEKEVGKGLKAAMEA 100 (344)
T ss_dssp ---CCEEEC-TTSCEEESBCEECTTC--------G-GGHHHHHHHHHHTTCCCEEECCGGGT---CHHHHHHHHHHHHHT
T ss_pred ccCCceEEC-CCCCccCCeeEeCCCC--------c-HHHHHHHHHHHHhcCCCEEECCCccC---CHHHHHHHHHHhhhc
Confidence 4464 7889 7999999999999862 5 889999999999 9999999999998 79999999986
Q ss_pred -CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCC---------------CCCHHHH
Q 024050 80 -LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT---------------SVPIEET 143 (273)
Q Consensus 80 -~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~---------------~~~~~~~ 143 (273)
.+|+++||+||++... .+++.+++++++||+|||+||||+|++|||+. ..+..++
T Consensus 101 g~~R~~v~I~TK~~~~~---------~~~~~v~~ale~SL~rLg~dyIDl~llH~p~~~~~~~~~~~~~~~~~~~~~~e~ 171 (344)
T 2bgs_A 101 GIDRKDLFVTSKIWCTN---------LAPERVRPALENTLKDLQLDYIDLYHIHWPFRLKDGAHMPPEAGEVLEFDMEGV 171 (344)
T ss_dssp TCCGGGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEESSSCEECTTCCSSCCTTCEECCCHHHH
T ss_pred CCCcccEEEEeccCCCC---------CCHHHHHHHHHHHHHHhCCCcEEEEEEecCCccccccccccccccccCCCHHHH
Confidence 4899999999997532 56899999999999999999999999999963 2367899
Q ss_pred HHHHHHHHHcCCccEEecCCCCHHHHHHHhhc--CCceEEeeecccccccccccHHHHHHHhCCeEEecccCCCccCCCC
Q 024050 144 IGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV--HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGGK 221 (273)
Q Consensus 144 ~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~--~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~~ 221 (273)
|++|++|+++||||+||||||++++++++++. .+++++|++||++.+. .+++++|+++||+|++|+||++| +
T Consensus 172 ~~aLe~l~~~GkIr~iGvSn~~~~~l~~~~~~~~i~p~v~Q~e~~~~~~~--~~ll~~~~~~gI~v~a~spL~~G---~- 245 (344)
T 2bgs_A 172 WKEMENLVKDGLVKDIGVCNYTVTKLNRLLRSAKIPPAVCQMEMHPGWKN--DKIFEACKKHGIHITAYSPLGSS---E- 245 (344)
T ss_dssp HHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEEESTTCTT---T-
T ss_pred HHHHHHHHHcCCccEEEEecCCHHHHHHHHHhcCCCceeeecccCcccCc--HHHHHHHHHCCCEEEEeCcccCC---C-
Confidence 99999999999999999999999999999876 4579999999999875 67999999999999999999988 1
Q ss_pred CCCCCCCCchhhhhccCchhHHHHHHhcCCChHHHHHHhhhcCCCcccccCC
Q 024050 222 AVVENVPADSFLVQRREPGQEQEYLFSHREPCQKVQLHFCSTSPSMGSRTGG 273 (273)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~aL~~~l~~p~v~s~~~g 273 (273)
+ .. ...+.+.++|.++|+|++|+||+|++++| + ++++|
T Consensus 246 --~-~~---------~~~~~l~~iA~~~g~s~aqvaL~w~l~~~-~-~vI~g 283 (344)
T 2bgs_A 246 --K-NL---------AHDPVVEKVANKLNKTPGQVLIKWALQRG-T-SVIPK 283 (344)
T ss_dssp --T-CC---------TTCHHHHHHHHHHTCCHHHHHHHHHHHHT-C-EECCB
T ss_pred --c-hh---------hccHHHHHHHHHhCCCHHHHHHHHHHhCC-C-eEEEC
Confidence 0 00 11345779999999999999999999998 3 56665
No 41
>3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=98.04 E-value=3e-06 Score=82.34 Aligned_cols=98 Identities=11% Similarity=0.065 Sum_probs=74.3
Q ss_pred HHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEE--ecCCCCH---H----------------HHHHH
Q 024050 114 CEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI--GLSEASP---G----------------TIRRA 172 (273)
Q Consensus 114 ~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~i--GvS~~~~---~----------------~l~~~ 172 (273)
++.+|.+|++||+|++ +|..+.. ..++++++++++..+|+|+++ |+|++.. + ...++
T Consensus 231 ~e~sL~~L~~d~vdI~-I~Ghn~~-~~~~iLeaa~~a~~~g~I~~iG~c~T~he~lr~~~~~~~~~~~pv~G~~~~~~~~ 308 (807)
T 3cf4_A 231 VEIGMGTIDKSKPFLC-VIGHNVA-GVTYMMDYMEDNNLTDKMEIAGLCCTAIDLTRYKEADRRPPYAKVIGSMSKELKV 308 (807)
T ss_dssp EEESGGGSCTTSCEEE-EESSCCH-HHHHHHHHHHHTTCTTTSEEEEESHHHHHHTTTTCTTCCCCCSEEEESGGGHHHH
T ss_pred eeccccccCCCCceEE-EECCcCc-cHHHHHHHHHHCCCCCCCcEEeeccCCCchhhccccccccccccccccHHHHHHH
Confidence 5567888999999995 6644332 235788999999999999999 4443322 1 24445
Q ss_pred hhcCCceEEeeecccccccccccHHHHHHHhCCeEEecccCCC-cc
Q 024050 173 HAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGR-GF 217 (273)
Q Consensus 173 ~~~~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~-G~ 217 (273)
++...+++++++|+-..+ ++++.|.++|++|++.+|..+ |.
T Consensus 309 i~tGa~dv~vV~~n~i~~----~ll~~a~~~Gm~Vit~sp~~~~Gr 350 (807)
T 3cf4_A 309 IRSGMPDVIVVDEQCVRG----DIVPEAQKLKIPVIASNPKIMYGL 350 (807)
T ss_dssp HHHTCCSEEEECSSSCCT----THHHHHHHTTCCEEECSTTCCTTC
T ss_pred hhcCCCeEEEEEecCCCh----HHHHHHHHCCCEEEEechhhhcCC
Confidence 667889999999998753 578999999999999999975 44
No 42
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=93.47 E-value=2.5 Score=37.12 Aligned_cols=154 Identities=10% Similarity=0.067 Sum_probs=97.1
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc-CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
+.++..+....+.+.|++.|..--.-......+.+ +++++ .+ ++-|..+... .++.+...+-+ +.
T Consensus 147 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~e~v-~avr~a~g--d~~l~vD~n~----------~~~~~~a~~~~-~~ 212 (384)
T 2pgw_A 147 TAEELARDAAVGHAQGERVFYLKVGRGEKLDLEIT-AAVRGEIG--DARLRLDANE----------GWSVHDAINMC-RK 212 (384)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHH-HHHHTTST--TCEEEEECTT----------CCCHHHHHHHH-HH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcCCCHHHHHHHH-HHHHHHcC--CcEEEEecCC----------CCCHHHHHHHH-HH
Confidence 57778888888999999988853211101122333 45554 33 5555555321 24555554443 46
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecC-CCCHHHHHHHhhcCCceEEeeeccccccccc-cc
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS-EASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS-~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~ 195 (273)
|+.++++++. .|-. .+.++.+.++++.-.|-=++-- -++++.++++++....+++|+..+-.---.+ ..
T Consensus 213 l~~~~i~~iE-----qP~~----~~~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 283 (384)
T 2pgw_A 213 LEKYDIEFIE-----QPTV----SWSIPAMAHVREKVGIPIVADQAAFTLYDVYEICRQRAADMICIGPREIGGIQPMMK 283 (384)
T ss_dssp HGGGCCSEEE-----CCSC----TTCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHH
T ss_pred HHhcCCCEEe-----CCCC----hhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEcchhhCCHHHHHH
Confidence 7777776554 4432 2346777788776656544443 3688999999998888999987765432111 67
Q ss_pred HHHHHHHhCCeEEecccCCC
Q 024050 196 IIPLCRELGIGIVPYSPLGR 215 (273)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~ 215 (273)
+...|+++|+.++..+.+..
T Consensus 284 i~~~A~~~g~~~~~~~~~es 303 (384)
T 2pgw_A 284 AAAVAEAAGLKICIHSSFTT 303 (384)
T ss_dssp HHHHHHHTTCCEEECCCSCC
T ss_pred HHHHHHHCCCeEeeccCcCC
Confidence 89999999999998764443
No 43
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=93.35 E-value=0.82 Score=40.23 Aligned_cols=152 Identities=10% Similarity=-0.040 Sum_probs=93.7
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.++..+....+.+.|++.|..--........+.+ +++++.-.+++-|..+... .++.+...+-++ .|
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~e~v-~avr~a~g~d~~l~vDan~----------~~~~~~a~~~~~-~l 212 (379)
T 2rdx_A 145 SEAETRAELARHRAAGYRQFQIKVGADWQSDIDRI-RACLPLLEPGEKAMADANQ----------GWRVDNAIRLAR-AT 212 (379)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHH-HHHGGGSCTTCEEEEECTT----------CSCHHHHHHHHH-HT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccCCHHHHHHHH-HHHHHhcCCCCEEEEECCC----------CCCHHHHHHHHH-HH
Confidence 56778888888999999988753211111122333 3455422335556655421 134544433322 24
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec-CCCCHHHHHHHhhcCCceEEeeeccccccccc-ccH
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l 196 (273)
+.++ + ++..|-. .++.+.++++.-.|-=++- +-++++.++++++....+++|+..+..---.+ ..+
T Consensus 213 ~~~~-----i-~iE~P~~------~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 280 (379)
T 2rdx_A 213 RDLD-----Y-ILEQPCR------SYEECQQVRRVADQPMKLDECVTGLHMAQRIVADRGAEICCLKISNLGGLSKARRT 280 (379)
T ss_dssp TTSC-----C-EEECCSS------SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEEETTTTTSHHHHHHH
T ss_pred HhCC-----e-EEeCCcC------CHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHH
Confidence 4444 4 4555532 5778888887665554433 34688899999998889999998877543212 678
Q ss_pred HHHHHHhCCeEEecccCC
Q 024050 197 IPLCRELGIGIVPYSPLG 214 (273)
Q Consensus 197 ~~~~~~~gi~v~a~spl~ 214 (273)
...|+++|+.++..+-+.
T Consensus 281 ~~~A~~~g~~~~~~~~~e 298 (379)
T 2rdx_A 281 RDFLIDNRMPVVAEDSWG 298 (379)
T ss_dssp HHHHHHTTCCEEEECSBC
T ss_pred HHHHHHcCCeEEEeeccC
Confidence 999999999999885444
No 44
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=93.14 E-value=2.2 Score=37.03 Aligned_cols=150 Identities=10% Similarity=0.042 Sum_probs=95.4
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCc---HHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNA---NEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCE 115 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~---se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~ 115 (273)
+.++..+....+.+.|++.|..-- |.+. ..+.+ +++++.-.+++-|..+... .++.+...+-++
T Consensus 144 ~~~~~~~~a~~~~~~Gf~~iKik~--g~~~~~~~~e~v-~avr~a~g~~~~l~vDan~----------~~~~~~a~~~~~ 210 (359)
T 1mdl_A 144 GVKLATERAVTAAELGFRAVKTRI--GYPALDQDLAVV-RSIRQAVGDDFGIMVDYNQ----------SLDVPAAIKRSQ 210 (359)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEC--CCSSHHHHHHHH-HHHHHHHCSSSEEEEECTT----------CSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEec--CCCCHHHHHHHH-HHHHHHhCCCCEEEEECCC----------CCCHHHHHHHHH
Confidence 567777888888999999888632 2211 22333 3444311235555555421 135555555444
Q ss_pred HHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec-CCCCHHHHHHHhhcCCceEEeeeccccccccc-
Q 024050 116 ASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHPITAVQMEWSLWTRDIE- 193 (273)
Q Consensus 116 ~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~- 193 (273)
. |+.++++++ ..|-.. +.++.+.++++.-.|-=++- +-++++.++++++....+++|+..+-.---.+
T Consensus 211 ~-l~~~~i~~i-----E~P~~~----~~~~~~~~l~~~~~iPI~~de~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~ 280 (359)
T 1mdl_A 211 A-LQQEGVTWI-----EEPTLQ----HDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIGACRLAMPDAMKIGGVTGW 280 (359)
T ss_dssp H-HHHHTCSCE-----ECCSCT----TCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTTTHHHHH
T ss_pred H-HHHhCCCeE-----ECCCCh----hhHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEeecchhhCCHHHH
Confidence 4 778887765 344321 34777888888766654443 34688899999998889999998776542212
Q ss_pred ccHHHHHHHhCCeEEecc
Q 024050 194 EEIIPLCRELGIGIVPYS 211 (273)
Q Consensus 194 ~~l~~~~~~~gi~v~a~s 211 (273)
..+...|+++|+.++..+
T Consensus 281 ~~i~~~A~~~g~~~~~~~ 298 (359)
T 1mdl_A 281 IRASALAQQFGIPMSSHL 298 (359)
T ss_dssp HHHHHHHHHTTCCBCCBS
T ss_pred HHHHHHHHHcCCeEeecc
Confidence 678999999999988774
No 45
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=92.99 E-value=1.3 Score=38.36 Aligned_cols=156 Identities=8% Similarity=0.027 Sum_probs=95.3
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.++..+....+.+.|++.|-.--........+.+ +++++. .+++-|.--.. . .++.+...+-++ .|
T Consensus 139 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~d~~~v-~avr~~-g~~~~l~vDan--~--------~~~~~~a~~~~~-~l 205 (345)
T 2zad_A 139 TVENRVKEAKKIFEEGFRVIKIKVGENLKEDIEAV-EEIAKV-TRGAKYIVDAN--M--------GYTQKEAVEFAR-AV 205 (345)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHH-HHHHHH-STTCEEEEECT--T--------CSCHHHHHHHHH-HH
T ss_pred CHHHHHHHHHHHHHcCcCEEEEeecCCHHHHHHHH-HHHHhh-CCCCeEEEECC--C--------CCCHHHHHHHHH-HH
Confidence 56778888888899999987642111111122333 455543 34554433221 1 245565555443 37
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec-CCCCHHHHHHHhhcCCceEEeeeccccccccc-ccH
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l 196 (273)
+.++++ +.++..|-.. +.++.+.+++++-.|-=.+- +-++++.++++++....+++|+..+- ---.+ ..+
T Consensus 206 ~~~~i~---~~~iE~P~~~----~~~~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~~~~d~v~ik~~~-GGit~~~~i 277 (345)
T 2zad_A 206 YQKGID---IAVYEQPVRR----EDIEGLKFVRFHSPFPVAADESARTKFDVMRLVKEEAVDYVNIKLMK-SGISDALAI 277 (345)
T ss_dssp HHTTCC---CSEEECCSCT----TCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHH-HHHHHHHHH
T ss_pred HhcCCC---eeeeeCCCCc----ccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHhCCCCEEEEeccc-ccHHHHHHH
Confidence 777765 1144555332 34677777777655543333 44788999999988888899986665 32111 678
Q ss_pred HHHHHHhCCeEEecccCCC
Q 024050 197 IPLCRELGIGIVPYSPLGR 215 (273)
Q Consensus 197 ~~~~~~~gi~v~a~spl~~ 215 (273)
...|+++|+.++..+.+..
T Consensus 278 ~~~A~~~g~~~~~~~~~es 296 (345)
T 2zad_A 278 VEIAESSGLKLMIGCMGES 296 (345)
T ss_dssp HHHHHTTTCEEEECCSSCC
T ss_pred HHHHHHcCCeEEEecCccc
Confidence 9999999999998876543
No 46
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=92.68 E-value=2.4 Score=37.36 Aligned_cols=155 Identities=16% Similarity=0.156 Sum_probs=97.7
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCC-CCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVY-GQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Y-g~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
+.++..+....+.+.|++.|..--.- .... .+.+. ++++.-.+++-|..+... .++.+...+-++.
T Consensus 164 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~-~e~v~-avr~a~g~d~~l~vDan~----------~~~~~~a~~~~~~- 230 (388)
T 2nql_A 164 TLKARGELAKYWQDRGFNAFKFATPVADDGP-AAEIA-NLRQVLGPQAKIAADMHW----------NQTPERALELIAE- 230 (388)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEGGGCTTCH-HHHHH-HHHHHHCTTSEEEEECCS----------CSCHHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHHhCCCEEEEeCCCCChHH-HHHHH-HHHHHhCCCCEEEEECCC----------CCCHHHHHHHHHH-
Confidence 67888888889999999988752111 1112 33333 444411235555555421 2456655555544
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec-CCCCHHHHHHHhhcCCceEEeeeccccccccc-cc
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~ 195 (273)
|+.++++++ ..|-. .+.++.+.++++.-.|-=++- +-++++.++++++....+++|+..+- ---.+ ..
T Consensus 231 l~~~~i~~i-----EqP~~----~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~-GGit~~~~ 300 (388)
T 2nql_A 231 MQPFDPWFA-----EAPVW----TEDIAGLEKVSKNTDVPIAVGEEWRTHWDMRARIERCRIAIVQPEMGH-KGITNFIR 300 (388)
T ss_dssp HGGGCCSCE-----ECCSC----TTCHHHHHHHHTSCCSCEEECTTCCSHHHHHHHHTTSCCSEECCCHHH-HCHHHHHH
T ss_pred HhhcCCCEE-----ECCCC----hhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEecCCC-CCHHHHHH
Confidence 777887665 34432 134777888887655554443 33688999999998888999987766 32112 67
Q ss_pred HHHHHHHhCCeEEecccCCCc
Q 024050 196 IIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (273)
+...|+++|+.++..+.+..+
T Consensus 301 i~~~A~~~g~~~~~h~~~es~ 321 (388)
T 2nql_A 301 IGALAAEHGIDVIPHATVGAG 321 (388)
T ss_dssp HHHHHHHHTCEECCCCCSSCS
T ss_pred HHHHHHHcCCeEEeecCCCcH
Confidence 889999999999887555443
No 47
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=92.39 E-value=2.9 Score=36.44 Aligned_cols=155 Identities=10% Similarity=0.094 Sum_probs=96.1
Q ss_pred CHHHHHHHHHHHHH-CCCCccccccCCCCCc---HHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHH
Q 024050 39 SEEDGISMIKHAFS-KGITFFDTADVYGQNA---NEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCC 114 (273)
Q Consensus 39 ~~~~~~~~l~~A~~-~Gin~~DtA~~Yg~g~---se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~ 114 (273)
+.++..+....+.+ .|++.|..-- |.+. ..+.+ +++++.-.+++-|...... .++.+...+-+
T Consensus 142 ~~e~~~~~a~~~~~~~Gf~~iKik~--g~~~~~~~~e~v-~avr~a~g~~~~l~vDan~----------~~~~~~a~~~~ 208 (370)
T 1nu5_A 142 DTARDIDSALEMIETRRHNRFKVKL--GARTPAQDLEHI-RSIVKAVGDRASVRVDVNQ----------GWDEQTASIWI 208 (370)
T ss_dssp CHHHHHHHHHHHHHTTSCSEEEEEC--SSSCHHHHHHHH-HHHHHHHGGGCEEEEECTT----------CCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCccEEEEec--CCCChHHHHHHH-HHHHHhcCCCCEEEEECCC----------CCCHHHHHHHH
Confidence 56777788888899 9999887532 2211 22222 3444311124445554321 13555555444
Q ss_pred HHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec-CCCCHHHHHHHhhcCCceEEeeeccccccccc
Q 024050 115 EASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHPITAVQMEWSLWTRDIE 193 (273)
Q Consensus 115 ~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~ 193 (273)
+ .|+.+++++ +..|-.. +.++.+.+++++-.|-=.+- +-++++.++++++....+++|+..+..---.+
T Consensus 209 ~-~l~~~~i~~-----iEqP~~~----~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~ 278 (370)
T 1nu5_A 209 P-RLEEAGVEL-----VEQPVPR----ANFGALRRLTEQNGVAILADESLSSLSSAFELARDHAVDAFSLKLCNMGGIAN 278 (370)
T ss_dssp H-HHHHHTCCE-----EECCSCT----TCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHH
T ss_pred H-HHHhcCcce-----EeCCCCc----ccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEEchhhcCCHHH
Confidence 3 577777664 4455322 34677778877655543322 44788999999998888999997765432112
Q ss_pred -ccHHHHHHHhCCeEEecccCCCc
Q 024050 194 -EEIIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 194 -~~l~~~~~~~gi~v~a~spl~~G 216 (273)
..+...|+++|+.++..+.+..+
T Consensus 279 ~~~i~~~A~~~g~~~~~~~~~es~ 302 (370)
T 1nu5_A 279 TLKVAAVAEAAGISSYGGTMLDST 302 (370)
T ss_dssp HHHHHHHHHHHTCEEEECCSSCCH
T ss_pred HHHHHHHHHHcCCcEEecCCcchH
Confidence 67899999999999988766544
No 48
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=92.38 E-value=3 Score=36.48 Aligned_cols=153 Identities=10% Similarity=0.049 Sum_probs=93.6
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCC-CcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQ-NANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~-g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
+.++..+....+.+.|++.|..--..+. ....+.+ +++++.-.+++-|..+... .++.+...+-++ .
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v-~avr~a~G~d~~l~vDan~----------~~~~~~a~~~~~-~ 213 (371)
T 2ovl_A 146 PVADLKTQADRFLAGGFRAIKMKVGRPDLKEDVDRV-SALREHLGDSFPLMVDANM----------KWTVDGAIRAAR-A 213 (371)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCSSHHHHHHHH-HHHHHHHCTTSCEEEECTT----------CSCHHHHHHHHH-H
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHH-HHHHHHhCCCCeEEEECCC----------CCCHHHHHHHHH-H
Confidence 5777888888899999998875321110 0122333 3444411123444444321 235555555444 3
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec-CCCCHHHHHHHhhcCCceEEeeeccccccccc-cc
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~ 195 (273)
|+.++++++ ..|-.. +.++.+.++++.-.|-=++- +-++++.++++++....+++|+..+-.---.+ ..
T Consensus 214 l~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~ 284 (371)
T 2ovl_A 214 LAPFDLHWI-----EEPTIP----DDLVGNARIVRESGHTIAGGENLHTLYDFHNAVRAGSLTLPEPDVSNIGGYTTFRK 284 (371)
T ss_dssp HGGGCCSEE-----ECCSCT----TCHHHHHHHHHHHCSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTTTTSHHHHHH
T ss_pred HHhcCCCEE-----ECCCCc----ccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEeeCccccCCHHHHHH
Confidence 777776644 455332 23666777776544543333 44688999999998888999997776543212 67
Q ss_pred HHHHHHHhCCeEEeccc
Q 024050 196 IIPLCRELGIGIVPYSP 212 (273)
Q Consensus 196 l~~~~~~~gi~v~a~sp 212 (273)
+...|+++|+.++..+.
T Consensus 285 i~~~A~~~gi~~~~h~~ 301 (371)
T 2ovl_A 285 VAALAEANNMLLTSHGV 301 (371)
T ss_dssp HHHHHHHTTCCEEECSC
T ss_pred HHHHHHHcCCeEccccH
Confidence 89999999999998754
No 49
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=92.27 E-value=5.6 Score=34.99 Aligned_cols=153 Identities=12% Similarity=0.103 Sum_probs=95.2
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCC-CCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYG-QNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg-~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
+.++..+....+.+.|++.|..-.... .....+.+ +++++.-.+++-|..+... .++.+...+-++.
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v-~avR~a~G~d~~l~vDan~----------~~~~~~a~~~~~~- 216 (391)
T 2qgy_A 149 DTNDYLRQIEKFYGKKYGGIKIYPMLDSLSISIQFV-EKVREIVGDELPLMLDLAV----------PEDLDQTKSFLKE- 216 (391)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEECCCCSSHHHHHHHH-HHHHHHHCSSSCEEEECCC----------CSCHHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCChHHHHHHHH-HHHHHHhCCCCEEEEEcCC----------CCCHHHHHHHHHH-
Confidence 678888888899999999887532111 01122223 3444311124444444421 2455655555444
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec-CCCCHHHHHHHhhcCCceEEeeeccccccccc-cc
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~ 195 (273)
|+.++++++ ..|-.. +.++.+.++++.-.|-=++- +-++++.++++++....+++|+..+..---.+ ..
T Consensus 217 l~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 287 (391)
T 2qgy_A 217 VSSFNPYWI-----EEPVDG----ENISLLTEIKNTFNMKVVTGEKQSGLVHFRELISRNAADIFNPDISGMGGLIDIIE 287 (391)
T ss_dssp HGGGCCSEE-----ECSSCT----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTSSCHHHHHH
T ss_pred HHhcCCCeE-----eCCCCh----hhHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECcchhCCHHHHHH
Confidence 777776654 444322 34777788887655543333 34688999999988888999997776543212 67
Q ss_pred HHHHHHHhCCeEEeccc
Q 024050 196 IIPLCRELGIGIVPYSP 212 (273)
Q Consensus 196 l~~~~~~~gi~v~a~sp 212 (273)
+...|+++|+.++..+.
T Consensus 288 i~~~A~~~gi~~~~~~~ 304 (391)
T 2qgy_A 288 ISNEASNNGIFISPHCW 304 (391)
T ss_dssp HHHHHHHTTCEECCBCC
T ss_pred HHHHHHHCCCEEeccCC
Confidence 89999999999998765
No 50
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=91.86 E-value=3.5 Score=36.00 Aligned_cols=157 Identities=12% Similarity=0.079 Sum_probs=96.3
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc-CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
+.++..+.++.+++.|++.|-.--.-..-..+...=+++++ .+.-++.|=... .++++... +.
T Consensus 143 ~~e~~~~~a~~~~~~G~~~iK~Kvg~~~~~~d~~~v~avr~~~~~~~l~vDaN~------------~~~~~~A~----~~ 206 (365)
T 3ik4_A 143 DEVHAAASAKAILARGIKSIKVKTAGVDVAYDLARLRAIHQAAPTAPLIVDGNC------------GYDVERAL----AF 206 (365)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCSSCHHHHHHHHHHHHHHSSSCCEEEECTT------------CCCHHHHH----HH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHHHHHhCCCCeEEEECCC------------CCCHHHHH----HH
Confidence 67888888899999999976543211100122222334554 433333333221 13444333 23
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-cc
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~ 195 (273)
+++|..+..++.++..|-... .++.+.++.++-.+. ..|=|-++...+.++++...++++|+..+. ---.+ ..
T Consensus 207 ~~~L~~~~~~i~~iEeP~~~~----d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~-GGit~~~~ 281 (365)
T 3ik4_A 207 CAACKAESIPMVLFEQPLPRE----DWAGMAQVTAQSGFAVAADESARSAHDVLRIAREGTASVINIKLMK-AGVAEGLK 281 (365)
T ss_dssp HHHHHHTTCCEEEEECCSCTT----CHHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHHTCCSEEEECHHH-HCHHHHHH
T ss_pred HHHHhhCCCCceEEECCCCcc----cHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHhCCCCEEEEcCCc-cCHHHHHH
Confidence 334411345788888885533 356677777664443 445566888999999888888999998776 32111 67
Q ss_pred HHHHHHHhCCeEEecccCCCc
Q 024050 196 IIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (273)
+...|+++|+.++..+.+..+
T Consensus 282 i~~~A~~~gi~~~~~~~~es~ 302 (365)
T 3ik4_A 282 MIAIAQAAGLGLMIGGMVESI 302 (365)
T ss_dssp HHHHHHHHTCEEEECCSSCCH
T ss_pred HHHHHHHcCCeEEecCCcccH
Confidence 899999999999988776544
No 51
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=91.85 E-value=6.1 Score=34.66 Aligned_cols=158 Identities=9% Similarity=0.089 Sum_probs=95.6
Q ss_pred CHHHHHHHHHHHHHC-CCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSK-GITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~-Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
+.++..+..+.+++. |++.|-.--.-..-..+...=+++++.-.+++-|....... ++.+...+ +-+.
T Consensus 148 ~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a~g~~~~l~vDan~~----------~~~~~A~~-~~~~ 216 (383)
T 3i4k_A 148 PLDVAVAEIEERIEEFGNRSFKLKMGAGDPAEDTRRVAELAREVGDRVSLRIDINAR----------WDRRTALH-YLPI 216 (383)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEECCSSCHHHHHHHHHHHHHTTTTTSEEEEECTTC----------SCHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHhcCCcEEEEeeCCCCHHHHHHHHHHHHHHcCCCCEEEEECCCC----------CCHHHHHH-HHHH
Confidence 567777777888887 99987653211000122223345655333455555554321 34444332 3456
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-cc
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~ 195 (273)
|+.+++++|. .|-... .++.+.++++.-.|. ..|=+-++.+.++++++....+++|+..+..---.+ ..
T Consensus 217 l~~~~i~~iE-----qP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ 287 (383)
T 3i4k_A 217 LAEAGVELFE-----QPTPAD----DLETLREITRRTNVSVMADESVWTPAEALAVVKAQAADVIALKTTKHGGLLESKK 287 (383)
T ss_dssp HHHTTCCEEE-----SCSCTT----CHHHHHHHHHHHCCEEEESTTCSSHHHHHHHHHHTCCSEEEECTTTTTSHHHHHH
T ss_pred HHhcCCCEEE-----CCCChh----hHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCCCEEEEcccccCCHHHHHH
Confidence 6777765554 453322 356666776654443 233355788999999988888999998776542212 67
Q ss_pred HHHHHHHhCCeEEecccCCCc
Q 024050 196 IIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (273)
+...|+++|+.++..+.+..+
T Consensus 288 ia~~A~~~gi~~~~~~~~es~ 308 (383)
T 3i4k_A 288 IAAIAEAGGLACHGATSLEGP 308 (383)
T ss_dssp HHHHHHHTTCEEEECCSCCCH
T ss_pred HHHHHHHcCCeEEeCCCCccH
Confidence 889999999999876655443
No 52
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=91.68 E-value=2 Score=37.97 Aligned_cols=156 Identities=8% Similarity=0.036 Sum_probs=94.4
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.++..+....+.+.|++.|..--........+.+ +++++.-.+++-|...... .++.+...+-++ .|
T Consensus 145 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~e~v-~avR~a~g~d~~l~vDan~----------~~~~~~a~~~~~-~l 212 (397)
T 2qde_A 145 EPEAVAEEALAVLREGFHFVKLKAGGPLKADIAMV-AEVRRAVGDDVDLFIDING----------AWTYDQALTTIR-AL 212 (397)
T ss_dssp CHHHHHHHHHHHHHHTCSCEEEECCSCHHHHHHHH-HHHHHHHCTTSCEEEECTT----------CCCHHHHHHHHH-HH
T ss_pred CHHHHHHHHHHHHHhhhhheeecccCCHHHHHHHH-HHHHHhhCCCCEEEEECCC----------CCCHHHHHHHHH-HH
Confidence 56778888888889999887753211101122333 4444411123334433321 245555554443 57
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec-CCCCHHHHHHHhhcCCceEEeeeccccccccc-ccH
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l 196 (273)
+.++++++ ..|-.. +.++.+.++++.-.|-=.+- +-++++.++++++....+++|+..+-.---.+ ..+
T Consensus 213 ~~~~i~~i-----EqP~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 283 (397)
T 2qde_A 213 EKYNLSKI-----EQPLPA----WDLDGMARLRGKVATPIYADESAQELHDLLAIINKGAADGLMIKTQKAGGLLKAQRW 283 (397)
T ss_dssp GGGCCSCE-----ECCSCT----TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred HhCCCCEE-----ECCCCh----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHH
Confidence 77776654 444322 34677778877655543332 44688899999988888999987766432112 678
Q ss_pred HHHHHHhCCeEEecccCCC
Q 024050 197 IPLCRELGIGIVPYSPLGR 215 (273)
Q Consensus 197 ~~~~~~~gi~v~a~spl~~ 215 (273)
...|+++|+.++..+-+..
T Consensus 284 ~~~A~~~g~~~~~~~~~es 302 (397)
T 2qde_A 284 LTLARLANLPVICGCMVGS 302 (397)
T ss_dssp HHHHHHHTCCEEECCCSCC
T ss_pred HHHHHHcCCeEEEecCccc
Confidence 9999999999998864443
No 53
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=91.57 E-value=2.4 Score=37.08 Aligned_cols=150 Identities=12% Similarity=0.109 Sum_probs=91.5
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.++..+..+.+.+.|++.|..-- ++....+.+ +++++.- .++-|...... .++.+. .+-++ .|
T Consensus 148 ~~~~~~~~a~~~~~~G~~~iKik~--~~~~d~~~v-~avr~a~-~~~~l~vDan~----------~~~~~~-~~~~~-~l 211 (375)
T 1r0m_A 148 DEQATVDLVRRHVEQGYRRIKLKI--KPGWDVQPV-RATREAF-PDIRLTVDANS----------AYTLAD-AGRLR-QL 211 (375)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEEC--BTTBSHHHH-HHHHHHC-TTSCEEEECTT----------CCCGGG-HHHHH-TT
T ss_pred CHHHHHHHHHHHHHhcccEEEEec--ChHHHHHHH-HHHHHHc-CCCeEEEeCCC----------CCCHHH-HHHHH-HH
Confidence 567788888888999999876421 222334444 4555522 45545544321 134444 33333 36
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-ccH
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l 196 (273)
+.+++++| ..|-.. +.++.+.+++++-.|- ..|=+-++.+.++++++....+++|+..+-.---.+ ..+
T Consensus 212 ~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 282 (375)
T 1r0m_A 212 DEYDLTYI-----EQPLAW----DDLVDHAELARRIRTPLCLDESVASASDARKALALGAGGVINLKVARVGGHAESRRV 282 (375)
T ss_dssp GGGCCSCE-----ECCSCT----TCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTSCSEEEECTTTTTSHHHHHHH
T ss_pred HhCCCcEE-----ECCCCc----ccHHHHHHHHHhCCCCEEecCccCCHHHHHHHHHhCCCCEEEECcchhcCHHHHHHH
Confidence 66665554 455332 3356677777664443 223345788999999988888999997776532212 678
Q ss_pred HHHHHHhCCeEEecccC
Q 024050 197 IPLCRELGIGIVPYSPL 213 (273)
Q Consensus 197 ~~~~~~~gi~v~a~spl 213 (273)
...|+++|+.++.-+-+
T Consensus 283 ~~~A~~~g~~~~~~~~~ 299 (375)
T 1r0m_A 283 HDVAQSFGAPVWCGGML 299 (375)
T ss_dssp HHHHHHTTCCEEECCCC
T ss_pred HHHHHHcCCcEEecCcc
Confidence 99999999996655444
No 54
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=91.49 E-value=2.4 Score=37.53 Aligned_cols=154 Identities=10% Similarity=0.011 Sum_probs=95.2
Q ss_pred CHHHHHHHHHHHHHCCCCccccccC----CCC--------C----c---HHHHHHHHHhcCCCCCEEEEeccCcCCCCCc
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADV----YGQ--------N----A---NEVLLGKALKQLPREKIQVATKFGIAGIGVA 99 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~----Yg~--------g----~---se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~ 99 (273)
+.++..+....+.+.|++.|..-.. +|. - + ..+.+ +++++.-.+++-|......
T Consensus 152 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~~~~~~~~~~~~~e~v-~avR~a~G~d~~l~vDan~------ 224 (407)
T 2o56_A 152 EPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQQNLNGPLTDKILRLGYDRM-AAIRDAVGPDVDIIAEMHA------ 224 (407)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSCSCCCSSCCHHHHHHHHHHH-HHHHHHHCTTSEEEEECTT------
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccCCcCccccCcccCCCchhHHHHHHHHH-HHHHHhcCCCCEEEEECCC------
Confidence 6788888888999999988765321 121 0 0 11222 2333311235555555421
Q ss_pred cccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec-CCCCHHHHHHHhhcCCc
Q 024050 100 GVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHPI 178 (273)
Q Consensus 100 ~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~~ 178 (273)
.++.+...+-++. |+.++++++ ..|-.. +.++.+.++++.-.|-=++- +-++++.++++++....
T Consensus 225 ----~~~~~~a~~~~~~-l~~~~i~~i-----E~P~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~ 290 (407)
T 2o56_A 225 ----FTDTTSAIQFGRM-IEELGIFYY-----EEPVMP----LNPAQMKQVADKVNIPLAAGERIYWRWGYRPFLENGSL 290 (407)
T ss_dssp ----CSCHHHHHHHHHH-HGGGCCSCE-----ECSSCS----SSHHHHHHHHHHCCSCEEECTTCCHHHHHHHHHHTTCC
T ss_pred ----CCCHHHHHHHHHH-HHhcCCCEE-----eCCCCh----hhHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCCC
Confidence 2456665555554 777776654 444322 34677777777655543333 33577889999988888
Q ss_pred eEEeeeccccccccc-ccHHHHHHHhCCeEEecccC
Q 024050 179 TAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSPL 213 (273)
Q Consensus 179 ~~~q~~~~l~~~~~~-~~l~~~~~~~gi~v~a~spl 213 (273)
+++|+..+-.---.+ ..+...|+++|+.++..+.+
T Consensus 291 d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~~~ 326 (407)
T 2o56_A 291 SVIQPDICTCGGITEVKKICDMAHVYDKTVQIHVCG 326 (407)
T ss_dssp SEECCCTTTTTHHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred CEEecCccccCCHHHHHHHHHHHHHcCCeEeecCCC
Confidence 999998776542212 67899999999999987664
No 55
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=91.48 E-value=3.3 Score=36.49 Aligned_cols=151 Identities=9% Similarity=0.013 Sum_probs=94.0
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCc---HHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNA---NEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCE 115 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~---se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~ 115 (273)
+.++..+....+.+.|++.|..-- |.+. ..+.+ +++++.-.+++-|...... .++.+...+-++
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKik~--g~~~~~~~~e~v-~avR~avg~d~~l~vDan~----------~~~~~~a~~~~~ 228 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKLKV--GQPDGALDIARV-TAVRKHLGDAVPLMVDANQ----------QWDRPTAQRMCR 228 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEC--CCSCHHHHHHHH-HHHHHHHCTTSCEEEECTT----------CCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEec--CCCCHHHHHHHH-HHHHHHcCCCCEEEEECCC----------CCCHHHHHHHHH
Confidence 678888888899999999887522 2111 22333 4555411123333333321 245666655554
Q ss_pred HHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec-CCCCHHHHHHHhhcCCceEEeeeccccccccc-
Q 024050 116 ASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHPITAVQMEWSLWTRDIE- 193 (273)
Q Consensus 116 ~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~- 193 (273)
. |+.++++++. .|-.. +.++.+.++++.-.|-=++- +-++++.++++++....+++|+..+-.---.+
T Consensus 229 ~-l~~~~i~~iE-----~P~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~ 298 (393)
T 2og9_A 229 I-FEPFNLVWIE-----EPLDA----YDHEGHAALALQFDTPIATGEMLTSAAEHGDLIRHRAADYLMPDAPRVGGITPF 298 (393)
T ss_dssp H-HGGGCCSCEE-----CCSCT----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTSHHHH
T ss_pred H-HHhhCCCEEE-----CCCCc----ccHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHCCCCCEEeeCccccCCHHHH
Confidence 4 7888876653 44322 34677777877655543333 44688999999998888999987665432111
Q ss_pred ccHHHHHHHhCCeEEeccc
Q 024050 194 EEIIPLCRELGIGIVPYSP 212 (273)
Q Consensus 194 ~~l~~~~~~~gi~v~a~sp 212 (273)
..+...|+++|+.++..+.
T Consensus 299 ~~i~~~A~~~gi~~~~h~~ 317 (393)
T 2og9_A 299 LKIASLAEHAGLMLAPHFA 317 (393)
T ss_dssp HHHHHHHHHTTCEECCCSC
T ss_pred HHHHHHHHHcCCEEeccCc
Confidence 6789999999999986543
No 56
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=91.30 E-value=3.3 Score=36.03 Aligned_cols=155 Identities=8% Similarity=0.086 Sum_probs=94.3
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcH---HHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNAN---EVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCE 115 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~s---e~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~ 115 (273)
+.++..+....+.+.|++.|..-- |.+.- .+.+ +++++.-..++-|...... .++.+...+-++
T Consensus 140 ~~~~~~~~a~~~~~~Gf~~iKik~--g~~~~~~d~~~v-~avr~a~g~~~~l~vDan~----------~~~~~~a~~~~~ 206 (366)
T 1tkk_A 140 SPEEMAADAENYLKQGFQTLKIKV--GKDDIATDIARI-QEIRKRVGSAVKLRLDANQ----------GWRPKEAVTAIR 206 (366)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEEC--CSSCHHHHHHHH-HHHHHHHCSSSEEEEECTT----------CSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEe--CCCCHHHHHHHH-HHHHHHhCCCCeEEEECCC----------CCCHHHHHHHHH
Confidence 567777888888899999887532 21111 2323 3444311224555555421 135555554444
Q ss_pred HHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEE-ecCCCCHHHHHHHhhcCCceEEeeeccccccccc-
Q 024050 116 ASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE- 193 (273)
Q Consensus 116 ~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~i-GvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~- 193 (273)
. |+..+ .++.++..|-.. +.++.+.+++++-.|-=. |=+-++.+.++++++....+++|+..+..---.+
T Consensus 207 ~-l~~~~---~~i~~iEqP~~~----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~ 278 (366)
T 1tkk_A 207 K-MEDAG---LGIELVEQPVHK----DDLAGLKKVTDATDTPIMADESVFTPRQAFEVLQTRSADLINIKLMKAGGISGA 278 (366)
T ss_dssp H-HHHTT---CCEEEEECCSCT----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHH
T ss_pred H-HhhcC---CCceEEECCCCc----ccHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHHhCCCCEEEeehhhhcCHHHH
Confidence 3 66511 244556666432 346777777776555433 3345788899999988888899987766432112
Q ss_pred ccHHHHHHHhCCeEEecccCC
Q 024050 194 EEIIPLCRELGIGIVPYSPLG 214 (273)
Q Consensus 194 ~~l~~~~~~~gi~v~a~spl~ 214 (273)
..+...|+++|+.++..+.+.
T Consensus 279 ~~i~~~A~~~g~~~~~~~~~e 299 (366)
T 1tkk_A 279 EKINAMAEACGVECMVGSMIE 299 (366)
T ss_dssp HHHHHHHHHHTCCEEECCSSC
T ss_pred HHHHHHHHHcCCcEEecCccc
Confidence 678999999999999877654
No 57
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=91.28 E-value=6.1 Score=34.69 Aligned_cols=158 Identities=12% Similarity=0.069 Sum_probs=96.4
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.++..+.++.+++.|++.|-.--.... ..+...=+++++.-.+++-|...... .++.+...+ +-+.|
T Consensus 142 ~~e~~~~~a~~~~~~Gf~~~KlK~g~~~-~~d~~~v~avR~a~g~~~~L~vDaN~----------~w~~~~A~~-~~~~l 209 (379)
T 3r0u_A 142 NVAETIQNIQNGVEANFTAIKVKTGADF-NRDIQLLKALDNEFSKNIKFRFDANQ----------GWNLAQTKQ-FIEEI 209 (379)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSSCH-HHHHHHHHHHHHHCCTTSEEEEECTT----------CCCHHHHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEeeecCCCH-HHHHHHHHHHHHhcCCCCeEEEeCCC----------CcCHHHHHH-HHHHH
Confidence 5788888888899999998765432211 12222334555522233334443221 134443332 22233
Q ss_pred HHcCCCc-ccEEEecCCCCCCCHHHHHHHHHHHHHcCCc-cEEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-cc
Q 024050 119 KRLDVDY-IDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (273)
Q Consensus 119 ~~L~~d~-iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~ 195 (273)
+. | .++.++..|-...+ ++.+.++++.-.+ -..|=|-++...+.++++....+++|+..+..---.+ ..
T Consensus 210 ~~----~~~~l~~iEeP~~~~d----~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGi~~~~~ 281 (379)
T 3r0u_A 210 NK----YSLNVEIIEQPVKYYD----IKAMAEITKFSNIPVVADESVFDAKDAERVIDEQACNMINIKLAKTGGILEAQK 281 (379)
T ss_dssp HT----SCCCEEEEECCSCTTC----HHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHH
T ss_pred hh----cCCCcEEEECCCCccc----HHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcCCCCEEEECccccCCHHHHHH
Confidence 33 2 56777777754332 5667777765444 3445566888999999988888899987766432111 67
Q ss_pred HHHHHHHhCCeEEecccCCCc
Q 024050 196 IIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (273)
+...|+++|+.++..+.+..+
T Consensus 282 ia~~A~~~gi~~~~~~~~es~ 302 (379)
T 3r0u_A 282 IKKLADSAGISCMVGCMMESP 302 (379)
T ss_dssp HHHHHHHTTCEEEECCCSCCH
T ss_pred HHHHHHHcCCEEEEeCCCccH
Confidence 899999999999988776544
No 58
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=91.21 E-value=2.8 Score=36.41 Aligned_cols=154 Identities=9% Similarity=0.003 Sum_probs=95.7
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.++..+..+.+++.|++.|..--.-.. ..+...=+++++.-.+++-|...... .++.+... +.+
T Consensus 139 ~~~~~~~~a~~~~~~G~~~~K~K~g~~~-~~d~~~v~avR~a~g~~~~l~vDan~----------~~~~~~a~----~~~ 203 (354)
T 3jva_A 139 EPNVMAQKAVEKVKLGFDTLKIKVGTGI-EADIARVKAIREAVGFDIKLRLDANQ----------AWTPKDAV----KAI 203 (354)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCH-HHHHHHHHHHHHHHCTTSEEEEECTT----------CSCHHHHH----HHH
T ss_pred CHHHHHHHHHHHHHhCCCeEEEEeCCCH-HHHHHHHHHHHHHcCCCCeEEEECCC----------CCCHHHHH----HHH
Confidence 6788888888899999998875432111 12222334555421234445555321 13443322 233
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-ccH
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l 196 (273)
++|. ..++.++..|-... .++.+.+++++-.|- ..|=+-++.+.++++++....+++|+..+-.---.+ ..+
T Consensus 204 ~~L~--~~~i~~iEqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~i 277 (354)
T 3jva_A 204 QALA--DYQIELVEQPVKRR----DLEGLKYVTSQVNTTIMADESCFDAQDALELVKKGTVDVINIKLMKCGGIHEALKI 277 (354)
T ss_dssp HHTT--TSCEEEEECCSCTT----CHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred HHHH--hcCCCEEECCCChh----hHHHHHHHHHhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHH
Confidence 4442 35677777775433 366777787765553 223355788999999988888899987766432111 678
Q ss_pred HHHHHHhCCeEEecccC
Q 024050 197 IPLCRELGIGIVPYSPL 213 (273)
Q Consensus 197 ~~~~~~~gi~v~a~spl 213 (273)
...|+++|+.++..+.+
T Consensus 278 ~~~A~~~gi~~~~~~~~ 294 (354)
T 3jva_A 278 NQICETAGIECMIGCMA 294 (354)
T ss_dssp HHHHHHTTCEEEECCCT
T ss_pred HHHHHHcCCeEEecCCC
Confidence 99999999999988777
No 59
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=91.05 E-value=2 Score=37.97 Aligned_cols=158 Identities=8% Similarity=-0.021 Sum_probs=97.7
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEE-eccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVA-TKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~-tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
+.++..+..+.+++.|++.|..--.... ..+...=+++++.-.+++-|. ..... .++.+...+ +-+.
T Consensus 142 ~~e~~~~~a~~~~~~G~~~~KiKvG~~~-~~d~~~v~avR~a~g~~~~l~~vDan~----------~~~~~~A~~-~~~~ 209 (391)
T 3gd6_A 142 EVESNLDVVRQKLEQGFDVFRLYVGKNL-DADEEFLSRVKEEFGSRVRIKSYDFSH----------LLNWKDAHR-AIKR 209 (391)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECSSCH-HHHHHHHHHHHHHHGGGCEEEEEECTT----------CSCHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeeCCCH-HHHHHHHHHHHHHcCCCCcEEEecCCC----------CcCHHHHHH-HHHH
Confidence 5778888889999999998875322111 122222234544111344444 44321 134443332 2334
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-ccH
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l 196 (273)
|+.+++ ++.++..|-... .++.+.++++.-.|.= |=|-++.+.++++++....+++|+..+-.---.+ ..+
T Consensus 210 l~~~~i---~~~~iEqP~~~~----d~~~~~~l~~~~~iPI-dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i 281 (391)
T 3gd6_A 210 LTKYDL---GLEMIESPAPRN----DFDGLYQLRLKTDYPI-SEHVWSFKQQQEMIKKDAIDIFNISPVFIGGLTSAKKA 281 (391)
T ss_dssp HTTCCS---SCCEEECCSCTT----CHHHHHHHHHHCSSCE-EEECCCHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred HHhcCC---CcceecCCCChh----hHHHHHHHHHHcCCCc-CCCCCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHH
Confidence 555553 335666664432 3677788888766664 7788999999999988888999987766532111 678
Q ss_pred HHHHHHhCCeEEecccCCCc
Q 024050 197 IPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 197 ~~~~~~~gi~v~a~spl~~G 216 (273)
...|+++|+.++..+.+..+
T Consensus 282 a~~A~~~gi~~~~~~~~es~ 301 (391)
T 3gd6_A 282 AYAAEVASKDVVLGTTQELS 301 (391)
T ss_dssp HHHHHHTTCEEEECCCCCCH
T ss_pred HHHHHHcCCEEEecCCCccH
Confidence 99999999999987655433
No 60
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=90.83 E-value=2.2 Score=37.50 Aligned_cols=154 Identities=7% Similarity=-0.019 Sum_probs=95.8
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.++..+..+.+.+.|++.|+.--.-.. ..+...=+++++.-.+++-|..+.... ++.+...+ +-+.|
T Consensus 145 ~~e~~~~~a~~~~~~G~~~iKiK~G~~~-~~d~~~v~avR~a~g~~~~l~vDan~~----------~~~~~a~~-~~~~l 212 (378)
T 3eez_A 145 SVEETRAVIDRYRQRGYVAHSVKIGGDV-ERDIARIRDVEDIREPGEIVLYDVNRG----------WTRQQALR-VMRAT 212 (378)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSCH-HHHHHHHHHHTTSCCTTCEEEEECTTC----------CCHHHHHH-HHHHT
T ss_pred CHHHHHHHHHHHHhCCCCEEEeccCCCH-HHHHHHHHHHHHHcCCCceEEEECCCC----------CCHHHHHH-HHHHh
Confidence 6788888889999999999886432111 122223345655323456666664321 34443332 22233
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccE-EecCCCCHHHHHHHhhcCCceEEeeeccccccccc-ccH
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY-IGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~-iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l 196 (273)
+.+ ++ ++..|-. .++.+.++++.-.|-= .|=+-++++.++++++....+++|+..+-.---.+ ..+
T Consensus 213 ~~~-----~i-~iEqP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~ik~~~~GGit~~~~i 280 (378)
T 3eez_A 213 EDL-----HV-MFEQPGE------TLDDIAAIRPLHSAPVSVDECLVTLQDAARVARDGLAEVFGIKLNRVGGLTRAARM 280 (378)
T ss_dssp GGG-----TC-CEECCSS------SHHHHHHTGGGCCCCEEECTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHH
T ss_pred ccC-----Ce-EEecCCC------CHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHH
Confidence 444 44 5555533 4677778877655542 23355788999999998888999997766432111 678
Q ss_pred HHHHHHhCCeEEecccCCCc
Q 024050 197 IPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 197 ~~~~~~~gi~v~a~spl~~G 216 (273)
...|+++|+.+...+.+..+
T Consensus 281 a~~A~~~g~~~~~~~~~es~ 300 (378)
T 3eez_A 281 RDIALTHGIDMFVMATGGSV 300 (378)
T ss_dssp HHHHHHTTCEEEEECSSCSH
T ss_pred HHHHHHcCCEEEcCCCCCCH
Confidence 99999999999977665544
No 61
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=90.61 E-value=3.9 Score=36.56 Aligned_cols=151 Identities=8% Similarity=0.045 Sum_probs=92.1
Q ss_pred CH-HHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 39 SE-EDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 39 ~~-~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
+. ++..+....+.+.|++.|..--........+.+ +++++.-.+++-|...... .++.+...+-++.
T Consensus 184 ~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~d~e~v-~avR~avG~d~~l~vDan~----------~~~~~eai~~~~~- 251 (428)
T 3bjs_A 184 QPKESLAEEAQEYIARGYKALKLRIGDAARVDIERV-RHVRKVLGDEVDILTDANT----------AYTMADARRVLPV- 251 (428)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECCSCHHHHHHHH-HHHHHHHCTTSEEEEECTT----------CCCHHHHHHHHHH-
T ss_pred ChHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHH-HHHHHhcCCCCEEEEECCC----------CCCHHHHHHHHHH-
Confidence 45 777778888889999887652111111122333 3444411234445444321 2456666555544
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCC-ccEE-ecCCCCHHHHHHHhhcCCceEEeeeccccccccc-c
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGK-IKYI-GLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-E 194 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~-ir~i-GvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~ 194 (273)
|+.++++++ ..|-.. +.++.+.+++++-. |-=. +=+-++++.++++++....+++|+..+-.---.+ .
T Consensus 252 L~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGitea~ 322 (428)
T 3bjs_A 252 LAEIQAGWL-----EEPFAC----NDFASYREVAKITPLVPIAAGENHYTRFEFGQMLDAGAVQVWQPDLSKCGGITEGI 322 (428)
T ss_dssp HHHTTCSCE-----ECCSCT----TCHHHHHHHTTTCSSSCEEECTTCCSHHHHHHHHTTCCEEEECCBTTTSSCHHHHH
T ss_pred HHhcCCCEE-----ECCCCc----cCHHHHHHHHHhCCCCcEEcCCCcCCHHHHHHHHHhCCCCEEEeCccccCCHHHHH
Confidence 788887654 344322 34677777776544 4323 2344688999999998889999998776532212 6
Q ss_pred cHHHHHHHhCCeEEec
Q 024050 195 EIIPLCRELGIGIVPY 210 (273)
Q Consensus 195 ~l~~~~~~~gi~v~a~ 210 (273)
.+...|+++|+.++..
T Consensus 323 ~ia~~A~~~gi~~~~~ 338 (428)
T 3bjs_A 323 RIAAMASAYRIPINAH 338 (428)
T ss_dssp HHHHHHHHTTCCBCCB
T ss_pred HHHHHHHHcCCeEEec
Confidence 7899999999998877
No 62
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=90.47 E-value=1.7 Score=37.99 Aligned_cols=155 Identities=13% Similarity=-0.030 Sum_probs=94.3
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.++..+....+.+.|++.|..--.-. -+....+=+++++.-.+++-|..+... .++.+... +.+
T Consensus 146 ~~~~~~~~a~~~~~~Gf~~iKik~g~~-~~~~~e~v~avr~a~g~~~~l~vDan~----------~~~~~~a~----~~~ 210 (371)
T 2ps2_A 146 EPEDMRARVAKYRAKGYKGQSVKISGE-PVTDAKRITAALANQQPDEFFIVDANG----------KLSVETAL----RLL 210 (371)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEEECCSC-HHHHHHHHHHHTTTCCTTCEEEEECTT----------BCCHHHHH----HHH
T ss_pred CHHHHHHHHHHHHHhChheEEeecCCC-HHHHHHHHHHHHHhcCCCCEEEEECCC----------CcCHHHHH----HHH
Confidence 577888888889999999887421111 011122223444422345666555431 13443332 334
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec-CCCCHHHHHHHhhcCCceEEeeeccccccccc-ccH
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l 196 (273)
++|- +..++ ++..|-. .++.+.++++.-.|-=++- +-++++.++++++....+++|+..+..---.+ ..+
T Consensus 211 ~~l~-~~~~i-~iE~P~~------~~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 282 (371)
T 2ps2_A 211 RLLP-HGLDF-ALEAPCA------TWRECISLRRKTDIPIIYDELATNEMSIVKILADDAAEGIDLKISKAGGLTRGRRQ 282 (371)
T ss_dssp HHSC-TTCCC-EEECCBS------SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHHTCCSEEEEEHHHHTSHHHHHHH
T ss_pred HHHH-hhcCC-cCcCCcC------CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEechhhcCCHHHHHHH
Confidence 4441 12245 5666532 5677888887655553333 34688899999988888999997766432112 678
Q ss_pred HHHHHHhCCeEEecccCCCc
Q 024050 197 IPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 197 ~~~~~~~gi~v~a~spl~~G 216 (273)
...|+++|+.++..+.+..+
T Consensus 283 ~~~A~~~g~~~~~~~~~es~ 302 (371)
T 2ps2_A 283 RDICLAAGYSVSVQETCGSD 302 (371)
T ss_dssp HHHHHHHTCEEEEECSSCCH
T ss_pred HHHHHHcCCeEEecCCCcCH
Confidence 89999999999988776544
No 63
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=90.38 E-value=6 Score=34.96 Aligned_cols=154 Identities=11% Similarity=0.088 Sum_probs=93.8
Q ss_pred CCHHHHHHHHHHHHHCCCCccccccC----CCC------------Cc--------HHHHHHHHHhcCCCCCEEEEeccCc
Q 024050 38 VSEEDGISMIKHAFSKGITFFDTADV----YGQ------------NA--------NEVLLGKALKQLPREKIQVATKFGI 93 (273)
Q Consensus 38 ~~~~~~~~~l~~A~~~Gin~~DtA~~----Yg~------------g~--------se~~lg~~l~~~~r~~~~i~tK~~~ 93 (273)
.+.++..+....+.+.|++.|..-.. +|. |. ..+.+ +++++.-.+++-|......
T Consensus 149 ~~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v-~avR~a~G~d~~l~vDan~ 227 (410)
T 2gl5_A 149 VTPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARI-AAMREAMGDDADIIVEIHS 227 (410)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHH-HHHHHHHCSSSEEEEECTT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccccCCcccccccccccccccCccchhHHHHHHHHH-HHHHHhcCCCCEEEEECCC
Confidence 36788888888999999998764321 121 00 11222 2333311235555554421
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec-CCCCHHHHHHH
Q 024050 94 AGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRA 172 (273)
Q Consensus 94 ~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-S~~~~~~l~~~ 172 (273)
.++.+...+-++. |+.++ +.++..|-.. +.++.+.+++++-.|-=++- +-++++.++++
T Consensus 228 ----------~~~~~~ai~~~~~-l~~~~-----i~~iE~P~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~ 287 (410)
T 2gl5_A 228 ----------LLGTNSAIQFAKA-IEKYR-----IFLYEEPIHP----LNSDNMQKVSRSTTIPIATGERSYTRWGYREL 287 (410)
T ss_dssp ----------CSCHHHHHHHHHH-HGGGC-----EEEEECSSCS----SCHHHHHHHHHHCSSCEEECTTCCTTHHHHHH
T ss_pred ----------CCCHHHHHHHHHH-HHhcC-----CCeEECCCCh----hhHHHHHHHHhhCCCCEEecCCcCCHHHHHHH
Confidence 2345555444433 55554 4556666432 34677777777655543333 34678899999
Q ss_pred hhcCCceEEeeeccccccccc-ccHHHHHHHhCCeEEeccc
Q 024050 173 HAVHPITAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSP 212 (273)
Q Consensus 173 ~~~~~~~~~q~~~~l~~~~~~-~~l~~~~~~~gi~v~a~sp 212 (273)
++....+++|+..+-.---.+ ..+...|+++|+.++..+.
T Consensus 288 i~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 328 (410)
T 2gl5_A 288 LEKQSIAVAQPDLCLCGGITEGKKICDYANIYDTTVQVHVC 328 (410)
T ss_dssp HHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEECCCCC
T ss_pred HHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEeecCC
Confidence 988888999998776532212 6789999999999998766
No 64
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=90.28 E-value=4.9 Score=35.46 Aligned_cols=151 Identities=11% Similarity=-0.005 Sum_probs=93.7
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCc---HHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNA---NEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCE 115 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~---se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~ 115 (273)
+.++..+....+.+.|++.|..-- |.+. ..+.+ +++++.-.+++-|...... .++.+...+-++
T Consensus 175 ~~e~~~~~a~~~~~~Gf~~vKik~--g~~~~~~d~e~v-~avR~avG~d~~l~vDan~----------~~~~~~ai~~~~ 241 (398)
T 2pp0_A 175 PLDQVLKNVVISRENGIGGIKLKV--GQPNCAEDIRRL-TAVREALGDEFPLMVDANQ----------QWDRETAIRMGR 241 (398)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEEC--CCSCHHHHHHHH-HHHHHHHCSSSCEEEECTT----------CSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCeEEEec--CCCCHHHHHHHH-HHHHHHcCCCCeEEEECCC----------CCCHHHHHHHHH
Confidence 678888888889999999887521 2111 22333 4454411123334444321 245666555555
Q ss_pred HHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec-CCCCHHHHHHHhhcCCceEEeeeccccccccc-
Q 024050 116 ASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHPITAVQMEWSLWTRDIE- 193 (273)
Q Consensus 116 ~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~- 193 (273)
. |+.++++++ ..|-.. +.++.+.+++++-.|-=++- +-++++.++++++....+++|+..+-.---.+
T Consensus 242 ~-l~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~ 311 (398)
T 2pp0_A 242 K-MEQFNLIWI-----EEPLDA----YDIEGHAQLAAALDTPIATGEMLTSFREHEQLILGNASDFVQPDAPRVGGISPF 311 (398)
T ss_dssp H-HGGGTCSCE-----ECCSCT----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTSHHHH
T ss_pred H-HHHcCCcee-----eCCCCh----hhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHH
Confidence 4 777776654 444322 34677777877655543333 44688999999998888899987665432112
Q ss_pred ccHHHHHHHhCCeEEeccc
Q 024050 194 EEIIPLCRELGIGIVPYSP 212 (273)
Q Consensus 194 ~~l~~~~~~~gi~v~a~sp 212 (273)
..+...|+++|+.++..+.
T Consensus 312 ~~i~~~A~~~gi~~~~h~~ 330 (398)
T 2pp0_A 312 LKIMDLAAKHGRKLAPHFA 330 (398)
T ss_dssp HHHHHHHHHTTCEECCCSC
T ss_pred HHHHHHHHHcCCeEeecCc
Confidence 6789999999999986543
No 65
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=90.10 E-value=4.4 Score=35.30 Aligned_cols=155 Identities=12% Similarity=0.072 Sum_probs=91.4
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHH-HHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVR-SCCEAS 117 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~-~~~~~s 117 (273)
+.++..+....+.+.|++.|..--........+.+ +++++.-.+++-|.-+... .++.+... +-++ .
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~e~v-~avr~a~g~~~~l~vDan~----------~~~~~~a~~~~~~-~ 208 (369)
T 2p8b_A 141 DPENMAEEAASMIQKGYQSFKMKVGTNVKEDVKRI-EAVRERVGNDIAIRVDVNQ----------GWKNSANTLTALR-S 208 (369)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHH-HHHHHHHCTTSEEEEECTT----------TTBSHHHHHHHHH-T
T ss_pred ChHHHHHHHHHHHHcCcCEEEEEeCCCHHHHHHHH-HHHHHHhCCCCeEEEECCC----------CCCHHHHHHHHHH-H
Confidence 56778888888899999988853211111112333 3444311124445444321 12334333 3332 2
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec-CCCCHHHHHHHhhcCCceEEeeeccccccccc-cc
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~ 195 (273)
|+.+++++ +..|-.. +.++.+.++++.-.|-=++- +-++++.++++++....+++|+..+-.---.+ ..
T Consensus 209 l~~~~i~~-----iEqP~~~----~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 279 (369)
T 2p8b_A 209 LGHLNIDW-----IEQPVIA----DDIDAMAHIRSKTDLPLMIDEGLKSSREMRQIIKLEAADKVNIKLMKCGGIYPAVK 279 (369)
T ss_dssp STTSCCSC-----EECCBCT----TCHHHHHHHHHTCCSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHH
T ss_pred HHhCCCcE-----EECCCCc----ccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEeecchhCCHHHHHH
Confidence 55555544 4454322 34777788887765543333 34688899999988888899987765432112 67
Q ss_pred HHHHHHHhCCeEEecccCC
Q 024050 196 IIPLCRELGIGIVPYSPLG 214 (273)
Q Consensus 196 l~~~~~~~gi~v~a~spl~ 214 (273)
+...|+++|+.++..+.+.
T Consensus 280 i~~~A~~~g~~~~~~~~~e 298 (369)
T 2p8b_A 280 LAHQAEMAGIECQVGSMVE 298 (369)
T ss_dssp HHHHHHHTTCEEEECCSSC
T ss_pred HHHHHHHcCCcEEecCCCc
Confidence 8899999999998876654
No 66
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=90.08 E-value=3 Score=36.40 Aligned_cols=151 Identities=15% Similarity=0.096 Sum_probs=90.2
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.++..+....+.+.|++.|..-- ++....+.+ +++++.- .++-|...... .++.+. .+ +-+.|
T Consensus 141 ~~~~~~~~a~~~~~~G~~~iKik~--~~~~d~~~v-~avr~a~-~~~~l~vDan~----------~~~~~~-~~-~~~~l 204 (369)
T 2zc8_A 141 SVEDTLRVVERHLEEGYRRIKLKI--KPGWDYEVL-KAVREAF-PEATLTADANS----------AYSLAN-LA-QLKRL 204 (369)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEEC--BTTBSHHHH-HHHHHHC-TTSCEEEECTT----------CCCGGG-HH-HHHGG
T ss_pred CHHHHHHHHHHHHHhhhheeeeec--ChhHHHHHH-HHHHHHc-CCCeEEEecCC----------CCCHHH-HH-HHHHH
Confidence 567788888888999999876421 222334444 4555422 34434433311 133444 33 33346
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccE-EecCCCCHHHHHHHhhcCCceEEeeeccccccccc-ccH
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY-IGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~-iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l 196 (273)
+.+++++|. .|-.. +.++.+.+++++-.|-= .|=+-++.+.++++++....+++|+..+-.---.+ ..+
T Consensus 205 ~~~~i~~iE-----qP~~~----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 275 (369)
T 2zc8_A 205 DELRLDYIE-----QPLAY----DDLLDHAKLQRELSTPICLDESLTGAEKARKAIELGAGRVFNVKPARLGGHGESLRV 275 (369)
T ss_dssp GGGCCSCEE-----CCSCT----TCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred HhCCCcEEE-----CCCCc----ccHHHHHHHHhhCCCCEEEcCccCCHHHHHHHHHhCCCCEEEEchhhhCCHHHHHHH
Confidence 666655544 55332 23566677776654432 23345788999999988888899987765432111 678
Q ss_pred HHHHHHhCCeEEecccCC
Q 024050 197 IPLCRELGIGIVPYSPLG 214 (273)
Q Consensus 197 ~~~~~~~gi~v~a~spl~ 214 (273)
...|+++|+.++..+-+.
T Consensus 276 ~~~A~~~g~~~~~~~~~e 293 (369)
T 2zc8_A 276 HALAESAGIPLWMGGMLE 293 (369)
T ss_dssp HHHHHHTTCCEEECCCCC
T ss_pred HHHHHHcCCcEEecCccc
Confidence 999999999966554443
No 67
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=89.64 E-value=4.9 Score=35.35 Aligned_cols=154 Identities=10% Similarity=0.088 Sum_probs=93.3
Q ss_pred CHHHHHHHHHHHHHCCCCccccccC------------CCCCcHH---H---HHHHHHhcCCCCCEEEEeccCcCCCCCcc
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADV------------YGQNANE---V---LLGKALKQLPREKIQVATKFGIAGIGVAG 100 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~------------Yg~g~se---~---~lg~~l~~~~r~~~~i~tK~~~~~~~~~~ 100 (273)
+.++..+....+.+.|++.|..-.. || |..+ + .+=+++++.-.+++-|......
T Consensus 137 ~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~g-g~~~~~~~~~~e~v~avr~a~G~d~~l~vD~n~------- 208 (392)
T 2poz_A 137 TPDEFARAVERPLKEGYGALKFYPLAQRVGSALQHVTRR-SMSAEAIELAYRRVKAVRDAAGPEIELMVDLSG------- 208 (392)
T ss_dssp SHHHHHHHTHHHHHTTCSEEEECCCCEEETTEEECCBTT-BCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTT-------
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecccccccccccccccC-CcchhhHHHHHHHHHHHHHhcCCCCEEEEECCC-------
Confidence 6788888888899999988764211 22 1111 1 1122333311235555554421
Q ss_pred ccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec-CCCCHHHHHHHhhcCCce
Q 024050 101 VIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHPIT 179 (273)
Q Consensus 101 ~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~~~ 179 (273)
.++.+...+-++. |+.++ +.++..|-.. +.++.+.++++.-.|-=++- +-++++.++++++....+
T Consensus 209 ---~~~~~~a~~~~~~-l~~~~-----i~~iE~P~~~----~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d 275 (392)
T 2poz_A 209 ---GLTTDETIRFCRK-IGELD-----ICFVEEPCDP----FDNGALKVISEQIPLPIAVGERVYTRFGFRKIFELQACG 275 (392)
T ss_dssp ---CSCHHHHHHHHHH-HGGGC-----EEEEECCSCT----TCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHTTTCCS
T ss_pred ---CCCHHHHHHHHHH-HHhcC-----CCEEECCCCc----ccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCC
Confidence 2345554444443 55554 4556666432 34677777877665554433 335778899999888889
Q ss_pred EEeeeccccccccc-ccHHHHHHHhCCeEEecccC
Q 024050 180 AVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSPL 213 (273)
Q Consensus 180 ~~q~~~~l~~~~~~-~~l~~~~~~~gi~v~a~spl 213 (273)
++|+..+-.---.+ ..+...|+++|+.++..+.+
T Consensus 276 ~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~h~~~ 310 (392)
T 2poz_A 276 IIQPDIGTAGGLMETKKICAMAEAYNMRVAPHVCG 310 (392)
T ss_dssp EECCCTTTSSCHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred EEecCccccCCHHHHHHHHHHHHHcCCeEecCCCC
Confidence 99997776532212 67899999999999987664
No 68
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=89.61 E-value=4.6 Score=35.30 Aligned_cols=150 Identities=9% Similarity=0.001 Sum_probs=94.4
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCc---HHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNA---NEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCE 115 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~---se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~ 115 (273)
+.++..+....+.+.|++.|..-- |.+. ..+.+ +++++.-.+++-|..+... .++.+ ...
T Consensus 145 ~~e~~~~~a~~~~~~Gf~~iKik~--g~~~~~~~~e~v-~avr~a~g~~~~l~vDan~----------~~~~~----~a~ 207 (378)
T 2qdd_A 145 TPDQMLGLIAEAAAQGYRTHSAKI--GGSDPAQDIARI-EAISAGLPDGHRVTFDVNR----------AWTPA----IAV 207 (378)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEEC--CSSCHHHHHHHH-HHHHHSCCTTCEEEEECTT----------CCCHH----HHH
T ss_pred CHHHHHHHHHHHHHHhhhheeecC--CCCChHHHHHHH-HHHHHHhCCCCEEEEeCCC----------CCCHH----HHH
Confidence 567788888888999999888632 2211 22333 3444422335556655421 13443 233
Q ss_pred HHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec-CCCCHHHHHHHhhcCCceEEeeeccccccccc-
Q 024050 116 ASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHPITAVQMEWSLWTRDIE- 193 (273)
Q Consensus 116 ~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~- 193 (273)
+.+++|. .++ ++..|-. .++.+.+++++-.|-=++- +-++++.++++++....+++|+..+..---.+
T Consensus 208 ~~~~~l~---~~i-~iEqP~~------d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~ 277 (378)
T 2qdd_A 208 EVLNSVR---ARD-WIEQPCQ------TLDQCAHVARRVANPIMLDECLHEFSDHLAAWSRGACEGVKIKPNRVGGLTRA 277 (378)
T ss_dssp HHHTSCC---CCC-EEECCSS------SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHH
T ss_pred HHHHHhC---CCc-EEEcCCC------CHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCCEEEecccccCCHHHH
Confidence 4455553 466 6666532 5778888887655543333 34678889999988888999987776432212
Q ss_pred ccHHHHHHHhCCeEEecccCCC
Q 024050 194 EEIIPLCRELGIGIVPYSPLGR 215 (273)
Q Consensus 194 ~~l~~~~~~~gi~v~a~spl~~ 215 (273)
..+...|+++|+.++..+.+..
T Consensus 278 ~~i~~~A~~~g~~~~~~~~~es 299 (378)
T 2qdd_A 278 RQIRDFGVSVGWQMHIEDVGGT 299 (378)
T ss_dssp HHHHHHHHHHTCEEEECCSSCC
T ss_pred HHHHHHHHHcCCeEEecCCCCc
Confidence 6789999999999998855443
No 69
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=89.27 E-value=4.9 Score=35.41 Aligned_cols=156 Identities=14% Similarity=0.067 Sum_probs=95.7
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCC-CCcHHHHHHHHHhc-CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYG-QNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEA 116 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg-~g~se~~lg~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~ 116 (273)
+.++..+.++.+++.|++.|=.--.-. .....+.+ +++++ .+. +-|..=.. . .++.+...+
T Consensus 144 ~~e~~~~~a~~~~~~G~~~iKlKvg~~~~~~d~~~v-~avR~~~~~--~~L~vDaN--~--------~w~~~~A~~---- 206 (389)
T 3s5s_A 144 SPERAEEAARRAAAMGFRALKVKVGGRLAASDPARI-EAIHAAAPG--ASLILDGN--G--------GLTAGEALA---- 206 (389)
T ss_dssp CSHHHHHHHHHHHHHTCCEEEEECCGGGTTTHHHHH-HHHHHHCTT--CEEEEECT--T--------CSCHHHHHH----
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEecCCChHHHHHHH-HHHHHhCCC--CeEEEECC--C--------CCCHHHHHH----
Confidence 567788888888999998764321111 11233333 34554 432 23332211 1 234443322
Q ss_pred HHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCc-cEEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-c
Q 024050 117 SLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-E 194 (273)
Q Consensus 117 sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~ 194 (273)
.+++|..+.+++.++..|-...+ ++.+.+|.+.-.| -+.|=|.++...+.++++...++++|+..+. ---.+ .
T Consensus 207 ~~~~L~~~~~~i~~iEeP~~~~d----~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~~a~d~v~~k~~~-GGit~~~ 281 (389)
T 3s5s_A 207 LVAHARRLGADVALLEQPVPRDD----WDGMKEVTRRAGVDVAADESAASAEDVLRVAAERAATVVNIKLMK-GGIAEAL 281 (389)
T ss_dssp HHHHHHHTTCEEEEEECCSCTTC----HHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHTTCCSEEEECHHH-HHHHHHH
T ss_pred HHHHHhhCCCCeEEEECCCCccc----HHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCCEEEecCCC-CCHHHHH
Confidence 34444213458899998865443 5566677665444 3556677889999999988889999998776 32111 6
Q ss_pred cHHHHHHHhCCeEEecccCCCc
Q 024050 195 EIIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 195 ~l~~~~~~~gi~v~a~spl~~G 216 (273)
.+...|+++|+.++..+.+..+
T Consensus 282 ~i~~~A~~~gi~~~~~~~~es~ 303 (389)
T 3s5s_A 282 DIAAVARAAGLGLMIGGMVESV 303 (389)
T ss_dssp HHHHHHHHTTCEEEECCSSCCH
T ss_pred HHHHHHHHcCCeEEecCCcccH
Confidence 6899999999999988776544
No 70
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=89.00 E-value=9.7 Score=33.01 Aligned_cols=152 Identities=9% Similarity=0.002 Sum_probs=90.5
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.++..+....+.+.|++.|-.-- ++....+.+. ++++.-.+++-|..... . .++.+. .+-+ +.|
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~vKik~--~~~~~~e~v~-avr~~~g~~~~l~vDan--~--------~~~~~~-~~~~-~~l 205 (368)
T 1sjd_A 141 TIPQLLDVVGGYLDEGYVRIKLKI--EPGWDVEPVR-AVRERFGDDVLLQVDAN--T--------AYTLGD-APQL-ARL 205 (368)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEC--BTTBSHHHHH-HHHHHHCTTSEEEEECT--T--------CCCGGG-HHHH-HTT
T ss_pred CHHHHHHHHHHHHHhCccEEEEec--CchhHHHHHH-HHHHhcCCCceEEEecc--C--------CCCHHH-HHHH-HHH
Confidence 567788888888899998876421 2223444444 44431112333333321 1 134444 3333 336
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEE-ecCCCCHHHHHHHhhcCCceEEeeeccccccccc-ccH
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~i-GvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l 196 (273)
+.+++++ +..|-.. +.++.+.+++++-.|-=. +=+-++++.++++++....+++|+..+..---.+ ..+
T Consensus 206 ~~~~i~~-----iE~P~~~----~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 276 (368)
T 1sjd_A 206 DPFGLLL-----IEQPLEE----EDVLGHAELARRIQTPICLDESIVSARAAADAIKLGAVQIVNIKPGRVGGYLEARRV 276 (368)
T ss_dssp GGGCCSE-----EECCSCT----TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHH
T ss_pred HhcCCCe-----EeCCCCh----hhHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHH
Confidence 6666554 4455322 346777778776554422 2244788999999988888999997776532111 678
Q ss_pred HHHHHHhCCeEEecccCC
Q 024050 197 IPLCRELGIGIVPYSPLG 214 (273)
Q Consensus 197 ~~~~~~~gi~v~a~spl~ 214 (273)
...|+++|+.++.-+-+.
T Consensus 277 ~~~A~~~g~~~~~~~~~e 294 (368)
T 1sjd_A 277 HDVCAAHGIPVWCGGMIE 294 (368)
T ss_dssp HHHHHHTTCCEEECCCCC
T ss_pred HHHHHHcCCcEEeCCccc
Confidence 999999999966554443
No 71
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=88.91 E-value=11 Score=33.16 Aligned_cols=150 Identities=9% Similarity=-0.058 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 40 EEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 40 ~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
.++..+.++.+++.|++.|..-- ++....+.+. ++++ .+.-.+.| .... .++.+. . .+-+.
T Consensus 164 ~e~~~~~a~~~~~~G~~~iKlKv--~~~~d~~~v~-avR~a~G~~~~L~v--DaN~----------~w~~~~-~-~~~~~ 226 (400)
T 3mwc_A 164 IETLIHQVEESLQEGYRRIKIKI--KPGWDVEPLQ-ETRRAVGDHFPLWT--DANS----------SFELDQ-W-ETFKA 226 (400)
T ss_dssp HHHHHHHHHHHHHHTCSCEEEEC--BTTBSHHHHH-HHHHHHCTTSCEEE--ECTT----------CCCGGG-H-HHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEe--CcchHHHHHH-HHHHhcCCCCEEEE--eCCC----------CCCHHH-H-HHHHH
Confidence 78888899999999999876532 2223334343 4554 23334444 3211 133444 2 33356
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-cc
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~ 195 (273)
|+.+++++| ..|-... .++.+.++++.-.|. ..|=|-++.+.++++++....+++|+..+-.---.+ ..
T Consensus 227 l~~~~i~~i-----EqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ 297 (400)
T 3mwc_A 227 MDAAKCLFH-----EQPLHYE----ALLDLKELGERIETPICLDESLISSRVAEFVAKLGISNIWNIKIQRVGGLLEAIK 297 (400)
T ss_dssp HGGGCCSCE-----ESCSCTT----CHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHH
T ss_pred HHhcCCCEE-----eCCCChh----hHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhcCCCCEEEEcchhhCCHHHHHH
Confidence 777776555 3453322 367777787765443 334466888999999988888999997766432111 67
Q ss_pred HHHHHHHhCCeEEecccCCC
Q 024050 196 IIPLCRELGIGIVPYSPLGR 215 (273)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~ 215 (273)
+...|+++|+.++..+.+..
T Consensus 298 ia~~A~~~gi~~~~~~~~es 317 (400)
T 3mwc_A 298 IYKIATDNGIKLWGGTMPES 317 (400)
T ss_dssp HHHHHHHTTCEEEECCSCCC
T ss_pred HHHHHHHcCCEEEecCCCCC
Confidence 89999999999988765543
No 72
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=88.78 E-value=4.9 Score=35.09 Aligned_cols=157 Identities=8% Similarity=0.004 Sum_probs=96.3
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.++..+..+.+++.|++.|-.--.... ..+...=+++++.-.+++-|...... .++.+...+ +-+.|
T Consensus 140 ~~e~~~~~a~~~~~~G~~~~K~KvG~~~-~~d~~~v~avR~~~g~~~~l~vDaN~----------~~~~~~A~~-~~~~l 207 (368)
T 3q45_A 140 EPHKMAADAVQIKKNGFEIIKVKVGGSK-ELDVERIRMIREAAGDSITLRIDANQ----------GWSVETAIE-TLTLL 207 (368)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCH-HHHHHHHHHHHHHHCSSSEEEEECTT----------CBCHHHHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEecCCH-HHHHHHHHHHHHHhCCCCeEEEECCC----------CCChHHHHH-HHHHH
Confidence 6788888888899999998765322111 12222334555411234444444321 134444332 34456
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-ccH
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l 196 (273)
+.+++++|. .|-. .+.++.+.+++++-.|- ..|=+-++.+.++++++....+++|+..+..---.+ ..+
T Consensus 208 ~~~~i~~iE-----qP~~----~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i 278 (368)
T 3q45_A 208 EPYNIQHCE-----EPVS----RNLYTALPKIRQACRIPIMADESCCNSFDAERLIQIQACDSFNLKLSKSAGITNALNI 278 (368)
T ss_dssp GGGCCSCEE-----CCBC----GGGGGGHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHH
T ss_pred hhcCCCEEE-----CCCC----hhHHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCeEEechhhcCCHHHHHHH
Confidence 666665554 4422 13466777787765543 233355889999999998889999998776542212 678
Q ss_pred HHHHHHhCCeEEecccCCCc
Q 024050 197 IPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 197 ~~~~~~~gi~v~a~spl~~G 216 (273)
...|+++|+.++..+.+..+
T Consensus 279 ~~~A~~~gi~~~~~~~~es~ 298 (368)
T 3q45_A 279 IRLAEQAHMPVQVGGFLESR 298 (368)
T ss_dssp HHHHHHTTCCEEECCSSCCH
T ss_pred HHHHHHcCCcEEecCccccH
Confidence 99999999999987766544
No 73
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=88.75 E-value=6.8 Score=34.21 Aligned_cols=153 Identities=13% Similarity=0.054 Sum_probs=94.1
Q ss_pred CHHHHHHHHHHHHHC-CCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSK-GITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~-Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
+.++..+..+.+++. |++.|-.--.-.....+...=+++++.-..++-|...... .++.+... +.
T Consensus 151 ~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~~g~~~~l~vDan~----------~~~~~~a~----~~ 216 (372)
T 3tj4_A 151 TLEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRERVDSAVRIAIDGNG----------KWDLPTCQ----RF 216 (372)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEECCCSSHHHHHHHHHHHHHHSCTTCEEEEECTT----------CCCHHHHH----HH
T ss_pred CHHHHHHHHHHHHHccCCCEEEEcCCCCCHHHHHHHHHHHHHHcCCCCcEEeeCCC----------CCCHHHHH----HH
Confidence 678888888899999 9998765321111112222334555522234555554321 13444332 23
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-cc
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~ 195 (273)
++.|. ..++.++..|-... .++.+.+++++-.+- ..|=+-++.+.++++++....+++|+..+-.---.+ ..
T Consensus 217 ~~~l~--~~~i~~iEqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ 290 (372)
T 3tj4_A 217 CAAAK--DLDIYWFEEPLWYD----DVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGAVAYVQPDVTRLGGITEYIQ 290 (372)
T ss_dssp HHHTT--TSCEEEEESCSCTT----CHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCTTTTTHHHHHHH
T ss_pred HHHHh--hcCCCEEECCCCch----hHHHHHHHHhhcCCCEEeCCCccCHHHHHHHHHcCCCCEEEeCccccCCHHHHHH
Confidence 33442 34677777775432 366777777765443 334456888999999998888999998776542111 67
Q ss_pred HHHHHHHhCCeEEecc
Q 024050 196 IIPLCRELGIGIVPYS 211 (273)
Q Consensus 196 l~~~~~~~gi~v~a~s 211 (273)
+...|+++|+.++..+
T Consensus 291 ia~~A~~~gi~~~~h~ 306 (372)
T 3tj4_A 291 VADLALAHRLPVVPHA 306 (372)
T ss_dssp HHHHHHHTTCCBCCCC
T ss_pred HHHHHHHcCCEEEecC
Confidence 8999999999998765
No 74
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=88.74 E-value=5.8 Score=34.87 Aligned_cols=157 Identities=10% Similarity=0.086 Sum_probs=93.7
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.++..+.++.+++.|++.|-.--....-..+...=+++++.- +++-|....... ++.+...+ +-+.|
T Consensus 148 ~~~~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a~-~~~~l~vDan~~----------~~~~~A~~-~~~~L 215 (385)
T 3i6e_A 148 DFDADIALMERLRADGVGLIKLKTGFRDHAFDIMRLELIARDF-PEFRVRVDYNQG----------LEIDEAVP-RVLDV 215 (385)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEECSSSCHHHHHHHHHHHHHHC-TTSEEEEECTTC----------CCGGGHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHhC-CCCeEEEECCCC----------CCHHHHHH-HHHHH
Confidence 5667777778888899998764321110012222334555522 555555554321 23333222 33455
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeecccccccc-cccH
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDI-EEEI 196 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~-~~~l 196 (273)
+.+++++| ..|-.. +.++.+.+++++-.|. ..|=|-++.+.+.++++....+++|+..+-.---. -..+
T Consensus 216 ~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i 286 (385)
T 3i6e_A 216 AQFQPDFI-----EQPVRA----HHFELMARLRGLTDVPLLADESVYGPEDMVRAAHEGICDGVSIKIMKSGGLTRAQTV 286 (385)
T ss_dssp HTTCCSCE-----ECCSCT----TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred HhcCCCEE-----ECCCCc----ccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHH
Confidence 66665554 345332 2367778887765443 33445688889999998888889998766543211 1678
Q ss_pred HHHHHHhCCeEEecccCCCc
Q 024050 197 IPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 197 ~~~~~~~gi~v~a~spl~~G 216 (273)
...|+++|+.++..+.+..|
T Consensus 287 ~~~A~~~gi~~~~~~~~es~ 306 (385)
T 3i6e_A 287 ARIAAAHGLMAYGGDMFEAG 306 (385)
T ss_dssp HHHHHHTTCEEEECCCSCCH
T ss_pred HHHHHHcCCEEEeCCCCccH
Confidence 99999999999876555443
No 75
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=88.72 E-value=8.8 Score=33.78 Aligned_cols=155 Identities=9% Similarity=0.032 Sum_probs=94.4
Q ss_pred CCHHHHHHHHHHHHHCCCCccccccC----CCC--------C----c---HHHHHHHHHhcCCCCCEEEEeccCcCCCCC
Q 024050 38 VSEEDGISMIKHAFSKGITFFDTADV----YGQ--------N----A---NEVLLGKALKQLPREKIQVATKFGIAGIGV 98 (273)
Q Consensus 38 ~~~~~~~~~l~~A~~~Gin~~DtA~~----Yg~--------g----~---se~~lg~~l~~~~r~~~~i~tK~~~~~~~~ 98 (273)
.+.++..+....+.+.|++.|..-.. +|. - + ..+.+ +++++.-.+++-|......
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~g~~~~~~~~~~~e~v-~avr~avG~d~~l~vDan~----- 218 (403)
T 2ox4_A 145 GRKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSREGVFLEGPLPSETIKIGVERV-EAIRNAVGPDVDIIVENHG----- 218 (403)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTCCCSSSCCHHHHHHHHHHH-HHHHHHHCTTSEEEEECTT-----
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccccCCccccccCcccCCCchHHHHHHHHHH-HHHHHHhCCCCeEEEECCC-----
Confidence 36788888888899999998774321 221 0 0 11222 2333311235555555421
Q ss_pred ccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec-CCCCHHHHHHHhhcCC
Q 024050 99 AGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHP 177 (273)
Q Consensus 99 ~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~ 177 (273)
.++.+...+-++. |+.++ +.++..|-.. +.++.+.+++++-.|-=++- +-++++.++++++...
T Consensus 219 -----~~~~~~ai~~~~~-l~~~~-----i~~iE~P~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~ 283 (403)
T 2ox4_A 219 -----HTDLVSAIQFAKA-IEEFN-----IFFYEEINTP----LNPRLLKEAKKKIDIPLASGERIYSRWGFLPFLEDRS 283 (403)
T ss_dssp -----CSCHHHHHHHHHH-HGGGC-----EEEEECCSCT----TSTHHHHHHHHTCCSCEEECTTCCHHHHHHHHHHTTC
T ss_pred -----CCCHHHHHHHHHH-HHhhC-----CCEEeCCCCh----hhHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCC
Confidence 2455555444443 56554 4456666432 34677788887766554433 3357788999998888
Q ss_pred ceEEeeeccccccccc-ccHHHHHHHhCCeEEecccC
Q 024050 178 ITAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSPL 213 (273)
Q Consensus 178 ~~~~q~~~~l~~~~~~-~~l~~~~~~~gi~v~a~spl 213 (273)
.+++|+..+-.---.+ ..+...|+++|+.++..+..
T Consensus 284 ~d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~~~ 320 (403)
T 2ox4_A 284 IDVIQPDLGTCGGFTEFKKIADMAHIFEVTVQAHVAG 320 (403)
T ss_dssp CSEECCCHHHHTHHHHHHHHHHHHHHTTCEECCCCCS
T ss_pred CCEEecCccccCCHHHHHHHHHHHHHcCCEEeecCCC
Confidence 8899987765432111 67899999999999987663
No 76
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=88.42 E-value=2.8 Score=36.66 Aligned_cols=157 Identities=12% Similarity=0.095 Sum_probs=93.3
Q ss_pred CHHHHHHHHHHHHHC-CCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSK-GITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~-Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
+.++..+..+.+++. |++.|-.--.......+...=+++++.-.+++-|...... .++.+...+ +-+.
T Consensus 139 ~~~~~~~~a~~~~~~~G~~~~K~K~g~~~~~~d~~~v~avR~a~g~~~~l~vDan~----------~~~~~~a~~-~~~~ 207 (367)
T 3dg3_A 139 DPVKMVAEAERIRETYGINTFKVKVGRRPVQLDTAVVRALRERFGDAIELYVDGNR----------GWSAAESLR-AMRE 207 (367)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEEEECCCSSTHHHHHHHHHHHHHHGGGSEEEEECTT----------CSCHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHhcCccEEEEeeCCChhhhHHHHHHHHHHHhCCCCEEEEECCC----------CCCHHHHHH-HHHH
Confidence 578888888888998 9998764332222212222334555411133444444321 134433322 2234
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccE-EecCCCCHHHHHHHhhcCCceEEeeeccccccccc-cc
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY-IGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~-iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~ 195 (273)
|+.++++ ++..|-.. +.++.+.++++.-.|.= .|=+-++.+.++++++....+++|+..+-. --.+ ..
T Consensus 208 l~~~~i~-----~iEqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~-Git~~~~ 277 (367)
T 3dg3_A 208 MADLDLL-----FAEELCPA----DDVLSRRRLVGQLDMPFIADESVPTPADVTREVLGGSATAISIKTART-GFTGSTR 277 (367)
T ss_dssp TTTSCCS-----CEESCSCT----TSHHHHHHHHHHCSSCEEECTTCSSHHHHHHHHHHTSCSEEEECHHHH-TTHHHHH
T ss_pred HHHhCCC-----EEECCCCc----ccHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEeehhhh-hHHHHHH
Confidence 4445544 44555432 23567777877655542 344557889999999888889999977665 3212 67
Q ss_pred HHHHHHHhCCeEEecccCCCc
Q 024050 196 IIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (273)
+...|+++|+.++..+.+..+
T Consensus 278 ia~~A~~~gi~~~~~~~~es~ 298 (367)
T 3dg3_A 278 VHHLAEGLGLDMVMGNQIDGQ 298 (367)
T ss_dssp HHHHHHHHTCEEEECCSSCCH
T ss_pred HHHHHHHcCCeEEECCcCCcH
Confidence 899999999999987655443
No 77
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=87.81 E-value=7.1 Score=34.52 Aligned_cols=154 Identities=13% Similarity=0.081 Sum_probs=93.9
Q ss_pred CHHHHHHHHHHHHHCCCCcccccc--CCCC-------Cc--------HHHHHHHHHhcCCCCCEEEEeccCcCCCCCccc
Q 024050 39 SEEDGISMIKHAFSKGITFFDTAD--VYGQ-------NA--------NEVLLGKALKQLPREKIQVATKFGIAGIGVAGV 101 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~--~Yg~-------g~--------se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~ 101 (273)
+.++..+....+.+.|++.|-.-- .||. |. ..+.+ +++++.-.+++-|......
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~~~~G~~~~~~~~~~~~e~v-~avRea~G~d~~l~vDan~-------- 219 (410)
T 2qq6_A 149 SNEEYIAVAREAVERGFDAIKLDVDDITGPLHRDFWNGAISPREHEAMVARV-AAVREAVGPEVEVAIDMHG-------- 219 (410)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSSTTCSCSSSCCCCHHHHHHHHHHH-HHHHHHHCSSSEEEEECTT--------
T ss_pred CHHHHHHHHHHHHHcCCCEEEeeccccCCcccCCcCccccchhhHHHHHHHH-HHHHHhcCCCCEEEEECCC--------
Confidence 567777888888999998775422 2332 11 11222 3344311235555554421
Q ss_pred cccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec-CCCCHHHHHHHhhcCCceE
Q 024050 102 IVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVHPITA 180 (273)
Q Consensus 102 ~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~~~~~ 180 (273)
.++.+...+-++. |+.+++++ +..|-.. +.++.+.+++++-.|-=.+- +-++++.++++++....++
T Consensus 220 --~~~~~~a~~~~~~-l~~~~i~~-----iEeP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~ 287 (410)
T 2qq6_A 220 --RFDIPSSIRFARA-MEPFGLLW-----LEEPTPP----ENLDALAEVRRSTSTPICAGENVYTRFDFRELFAKRAVDY 287 (410)
T ss_dssp --CCCHHHHHHHHHH-HGGGCCSE-----EECCSCT----TCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCSE
T ss_pred --CCCHHHHHHHHHH-HhhcCCCe-----EECCCCh----hhHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCE
Confidence 2456655555443 77776654 4455332 34677778877655543333 3468899999998888899
Q ss_pred Eeeeccccccccc-ccHHHHHHHhCCeEEecccC
Q 024050 181 VQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSPL 213 (273)
Q Consensus 181 ~q~~~~l~~~~~~-~~l~~~~~~~gi~v~a~spl 213 (273)
+|+..+-.---.+ ..+...|+++|+.++..+..
T Consensus 288 v~ik~~~~GGite~~~ia~~A~~~g~~~~~h~~~ 321 (410)
T 2qq6_A 288 VMPDVAKCGGLAEAKRIANLAELDYIPFAPHNVS 321 (410)
T ss_dssp ECCBHHHHTHHHHHHHHHHHHHTTTCCBCCBCCS
T ss_pred EecCccccCCHHHHHHHHHHHHHcCCeEeecCCC
Confidence 9987765432111 67889999999999887663
No 78
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=87.68 E-value=12 Score=32.93 Aligned_cols=155 Identities=8% Similarity=0.006 Sum_probs=96.2
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCC-CCCcHHHHHHHHHhc-CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVY-GQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEA 116 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Y-g~g~se~~lg~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~ 116 (273)
+.++..+.++.+++.|++.|-.--.- ......+.+ +++++ ....++-|....... ++++ ...+
T Consensus 164 ~~e~~~~~a~~~~~~G~~~~KlKvg~~~~~~d~~~v-~avR~a~gg~~~~L~vDaN~~----------w~~~----~A~~ 228 (391)
T 4e8g_A 164 QPDEIARIAAEKVAEGFPRLQIKIGGRPVEIDIETV-RKVWERIRGTGTRLAVDGNRS----------LPSR----DALR 228 (391)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSSCHHHHHHHH-HHHHHHHTTTTCEEEEECTTC----------CCHH----HHHH
T ss_pred CHHHHHHHHHHHHHcCCcEEEEcCCCCCHHHHHHHH-HHHHHHhCCCCCeEEEeCCCC----------CCHH----HHHH
Confidence 67888888899999999987643211 111122223 34443 221445555543221 3433 2334
Q ss_pred HHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-c
Q 024050 117 SLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-E 194 (273)
Q Consensus 117 sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~ 194 (273)
.+++|. ..++ ++..|- +.++.+.++++.-.|. ..|=|-++...+.++++...++++|+..+..---.+ .
T Consensus 229 ~~~~L~--~~~i-~iEeP~------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~d~v~ik~~~~GGit~~~ 299 (391)
T 4e8g_A 229 LSRECP--EIPF-VLEQPC------NTLEEIAAIRGRVQHGIYLDESGEDLSTVIRAAGQGLCDGFGMKLTRIGGLQQMA 299 (391)
T ss_dssp HHHHCT--TSCE-EEESCS------SSHHHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHH
T ss_pred HHHHHh--hcCe-EEecCC------ccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCccccCCHHHHH
Confidence 445554 2477 777772 1367777887765443 345566888999999988888999997766432111 6
Q ss_pred cHHHHHHHhCCeEEecccCCCcc
Q 024050 195 EIIPLCRELGIGIVPYSPLGRGF 217 (273)
Q Consensus 195 ~l~~~~~~~gi~v~a~spl~~G~ 217 (273)
.+...|+++|+.+...+.+..++
T Consensus 300 ~ia~~A~~~gi~~~~~~~~es~i 322 (391)
T 4e8g_A 300 AFRDICEARALPHSCDDAWGGDI 322 (391)
T ss_dssp HHHHHHHHTTCCEEEECSSCSHH
T ss_pred HHHHHHHHcCCeEEeCCcCCCHH
Confidence 78999999999999887765543
No 79
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=87.28 E-value=14 Score=32.27 Aligned_cols=151 Identities=11% Similarity=-0.013 Sum_probs=92.7
Q ss_pred CHHHHHHHHHHHHHCCCCccccccC--C-CC----CcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADV--Y-GQ----NANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVR 111 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~--Y-g~----g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~ 111 (273)
+.++..+..+.+.+.|++.|..--. | +. ....+.+ +++++.-.+++-|..+... .++.+...
T Consensus 149 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v-~avr~a~g~d~~l~vDan~----------~~~~~~a~ 217 (382)
T 1rvk_A 149 TPEDYGRFAETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKAC-AAVREAVGPDIRLMIDAFH----------WYSRTDAL 217 (382)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHH-HHHHHHHCTTSEEEEECCT----------TCCHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCcCccccccchHHHHHHH-HHHHHHhCCCCeEEEECCC----------CCCHHHHH
Confidence 6788888888899999998764211 1 10 0112223 3444411235555555421 24555555
Q ss_pred HHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec-CCCC-HHHHHHHhhcCCceEEeeeccccc
Q 024050 112 SCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEAS-PGTIRRAHAVHPITAVQMEWSLWT 189 (273)
Q Consensus 112 ~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-S~~~-~~~l~~~~~~~~~~~~q~~~~l~~ 189 (273)
+-+ +.|+.+++++ +..|-.. +.++.+.++++.-.|-=++- +-++ ++.++++++....+++|+..+-.-
T Consensus 218 ~~~-~~l~~~~i~~-----iE~P~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~i~~~~~d~v~ik~~~~G 287 (382)
T 1rvk_A 218 ALG-RGLEKLGFDW-----IEEPMDE----QSLSSYKWLSDNLDIPVVGPESAAGKHWHRAEWIKAGACDILRTGVNDVG 287 (382)
T ss_dssp HHH-HHHHTTTCSE-----EECCSCT----TCHHHHHHHHHHCSSCEEECSSCSSHHHHHHHHHHTTCCSEEEECHHHHT
T ss_pred HHH-HHHHhcCCCE-----EeCCCCh----hhHHHHHHHHhhCCCCEEEeCCccCcHHHHHHHHHcCCCCEEeeCchhcC
Confidence 444 3567676654 4455332 34677777877655543333 3467 889999999888999998776543
Q ss_pred cccc-ccHHHHHHHhCCeEEec
Q 024050 190 RDIE-EEIIPLCRELGIGIVPY 210 (273)
Q Consensus 190 ~~~~-~~l~~~~~~~gi~v~a~ 210 (273)
--.+ ..+...|+++|+.++..
T Consensus 288 Git~~~~i~~~A~~~g~~~~~~ 309 (382)
T 1rvk_A 288 GITPALKTMHLAEAFGMECEVH 309 (382)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEC
T ss_pred CHHHHHHHHHHHHHcCCeEeec
Confidence 2112 67899999999999987
No 80
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=87.06 E-value=13 Score=32.83 Aligned_cols=151 Identities=13% Similarity=0.120 Sum_probs=94.5
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCC-----------cHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQN-----------ANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAP 107 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g-----------~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~ 107 (273)
+.++..+.++.+++.|++.|-. -|.. ......=+++++.-.+++-|...... .++.
T Consensus 125 ~~e~~~~~a~~~~~~G~~~iKl---~G~~~~~~~~~~~~~~~d~e~v~avR~avG~d~~L~vDaN~----------~~~~ 191 (405)
T 3rr1_A 125 RPADVIAGMKALQAGGFDHFKL---NGCEEMGIIDTSRAVDAAVARVAEIRSAFGNTVEFGLDFHG----------RVSA 191 (405)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEE---ESCCSSSCBCSHHHHHHHHHHHHHHHHTTGGGSEEEEECCS----------CBCH
T ss_pred CHHHHHHHHHHHHHcCCCEEEE---ecCCcccccccchhHHHHHHHHHHHHHHhCCCceEEEECCC----------CCCH
Confidence 6788899999999999999887 2211 01122234555422234445544321 1344
Q ss_pred HHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccE-EecCCCCHHHHHHHhhcCCceEEeeecc
Q 024050 108 DYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY-IGLSEASPGTIRRAHAVHPITAVQMEWS 186 (273)
Q Consensus 108 ~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~-iGvS~~~~~~l~~~~~~~~~~~~q~~~~ 186 (273)
+...+ +-+.|+.++++++ ..|-... .++.+.++++.-.|-= .|=+-+++..++++++....+++|+..+
T Consensus 192 ~~A~~-~~~~L~~~~i~~i-----EeP~~~~----d~~~~~~l~~~~~iPIa~dE~i~~~~~~~~~l~~~a~d~v~~d~~ 261 (405)
T 3rr1_A 192 PMAKV-LIKELEPYRPLFI-----EEPVLAE----QAETYARLAAHTHLPIAAGERMFSRFDFKRVLEAGGVSILQPDLS 261 (405)
T ss_dssp HHHHH-HHHHHGGGCCSCE-----ECSSCCS----STHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHCCCSEECCBTT
T ss_pred HHHHH-HHHHHHhcCCCEE-----ECCCCcc----cHHHHHHHHhcCCCCEEecCCcCCHHHHHHHHHHhCCCeEEEChh
Confidence 44433 3345666665554 4554322 3567778887665543 2335578889999998888999999877
Q ss_pred ccccccc-ccHHHHHHHhCCeEEeccc
Q 024050 187 LWTRDIE-EEIIPLCRELGIGIVPYSP 212 (273)
Q Consensus 187 l~~~~~~-~~l~~~~~~~gi~v~a~sp 212 (273)
-.---.+ ..+...|+++|+.+...+.
T Consensus 262 ~~GGitea~kia~lA~~~gi~v~~h~~ 288 (405)
T 3rr1_A 262 HAGGITECVKIAAMAEAYDVALAPHCP 288 (405)
T ss_dssp TTTHHHHHHHHHHHHHTTTCEECCBCC
T ss_pred hcCCHHHHHHHHHHHHHcCCEEEeCCC
Confidence 6542111 6789999999999987754
No 81
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=86.71 E-value=13 Score=32.76 Aligned_cols=153 Identities=10% Similarity=0.068 Sum_probs=91.7
Q ss_pred CHHHHHHHH-HHHHHCCCCccccccCCC----C-C-cHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHH
Q 024050 39 SEEDGISMI-KHAFSKGITFFDTADVYG----Q-N-ANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVR 111 (273)
Q Consensus 39 ~~~~~~~~l-~~A~~~Gin~~DtA~~Yg----~-g-~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~ 111 (273)
+.++..+.+ +.+++.|++.|-.--... . . ..+...=+++++.-.+++-|...... .++.+...
T Consensus 139 ~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~~~~~~~d~~~v~avR~a~g~~~~l~vDaN~----------~~~~~~A~ 208 (393)
T 4dwd_A 139 SVDEVVREVARRVEAEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVRELLGPDAVIGFDANN----------GYSVGGAI 208 (393)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHHHHCTTCCEEEECTT----------CCCHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEccCCCCcccccCHHHHHHHHHHHHHHhCCCCeEEEECCC----------CCCHHHHH
Confidence 577888888 888999999876532110 0 1 11222233455411123334434321 13444433
Q ss_pred HHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccE-EecCCCCHHHHHHHhhcCCceEEeeecccccc
Q 024050 112 SCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY-IGLSEASPGTIRRAHAVHPITAVQMEWSLWTR 190 (273)
Q Consensus 112 ~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~-iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~ 190 (273)
+ +-+.|+.+++++| ..|-... .++.+.++++.-.|-= .|=+-++.+.++++++.. .+++|+..+..--
T Consensus 209 ~-~~~~L~~~~i~~i-----EqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-~d~v~~k~~~~GG 277 (393)
T 4dwd_A 209 R-VGRALEDLGYSWF-----EEPVQHY----HVGAMGEVAQRLDITVSAGEQTYTLQALKDLILSG-VRMVQPDIVKMGG 277 (393)
T ss_dssp H-HHHHHHHTTCSEE-----ECCSCTT----CHHHHHHHHHHCSSEEEBCTTCCSHHHHHHHHHHT-CCEECCCTTTTTH
T ss_pred H-HHHHHHhhCCCEE-----ECCCCcc----cHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcC-CCEEEeCccccCC
Confidence 3 3345677776555 4453322 3677778887655532 233457888999998888 9999998776542
Q ss_pred ccc-ccHHHHHHHhCCeEEeccc
Q 024050 191 DIE-EEIIPLCRELGIGIVPYSP 212 (273)
Q Consensus 191 ~~~-~~l~~~~~~~gi~v~a~sp 212 (273)
-.+ ..+...|+++|+.+...+.
T Consensus 278 it~~~~ia~~A~~~gi~~~~h~~ 300 (393)
T 4dwd_A 278 ITGMMQCAALAHAHGVEFVPHQT 300 (393)
T ss_dssp HHHHHHHHHHHHHHTCEECCCCC
T ss_pred HHHHHHHHHHHHHcCCEEeecCC
Confidence 111 6789999999999987766
No 82
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=86.63 E-value=16 Score=32.03 Aligned_cols=156 Identities=9% Similarity=-0.081 Sum_probs=97.6
Q ss_pred CHHHHHHHHHHHHHCCCCccccccC-CC-CCc--HHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADV-YG-QNA--NEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCC 114 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~-Yg-~g~--se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~ 114 (273)
+.++..+.++.+++.|++.|-.--. +. .+. .+...=+++++.-..++-|....... ++.+. .
T Consensus 145 ~~e~~~~~a~~~~~~G~~~~K~Kvg~~~~~~~~~~d~~~v~avR~a~G~~~~L~vDaN~~----------~~~~~----A 210 (386)
T 3fv9_G 145 TPEAMRAKVARHRAQGFKGHSIKIGASEAEGGPALDAERITACLADRQPGEWYLADANNG----------LTVEH----A 210 (386)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCCTTTTHHHHHHHHHHHHTTTCCTTCEEEEECTTC----------CCHHH----H
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeccCCCCCCCHHHHHHHHHHHHHHcCCCCeEEEECCCC----------CCHHH----H
Confidence 6788888889999999998765321 00 011 22222335554223455555554321 34332 3
Q ss_pred HHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc
Q 024050 115 EASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE 193 (273)
Q Consensus 115 ~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~ 193 (273)
.+.+++|. +.+++ ++..|-. .++.+.+++++-.|. ..|=|-++.+.+.++++....+++|+..+..---.+
T Consensus 211 ~~~~~~l~-~~~~i-~iEeP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~ 282 (386)
T 3fv9_G 211 LRMLSLLP-PGLDI-VLEAPCA------SWAETKSLRARCALPLLLDELIQTETDLIAAIRDDLCDGVGLKVSKQGGITP 282 (386)
T ss_dssp HHHHHHSC-SSCCC-EEECCCS------SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHH
T ss_pred HHHHHHhh-ccCCc-EEecCCC------CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEECccccCCHHH
Confidence 34455663 34567 7777644 366777887765543 334456888999999988888999997776532111
Q ss_pred -ccHHHHHHHhCCeEEecccCCCc
Q 024050 194 -EEIIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 194 -~~l~~~~~~~gi~v~a~spl~~G 216 (273)
..+...|+++|+.++..+.+..+
T Consensus 283 ~~~i~~~A~~~gi~~~~~~~~es~ 306 (386)
T 3fv9_G 283 MLRQRAIAAAAGMVMSVQDTVGSQ 306 (386)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCCH
T ss_pred HHHHHHHHHHcCCEEEeCCCCCCH
Confidence 67899999999999976655544
No 83
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=86.47 E-value=14 Score=32.42 Aligned_cols=152 Identities=9% Similarity=0.001 Sum_probs=93.9
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.++..+..+.+.+.|++.|..--.-.. ..+..+=+++++.-..++-|..+... .++.+...+ +-+.|
T Consensus 151 ~~e~~~~~a~~~~~~G~~~iKiKvG~~~-~~d~~~v~avR~a~g~d~~l~vDan~----------~~~~~~A~~-~~~~l 218 (389)
T 3ozy_A 151 TPDQAADELAGWVEQGFTAAKLKVGRAP-RKDAANLRAMRQRVGADVEILVDANQ----------SLGRHDALA-MLRIL 218 (389)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCH-HHHHHHHHHHHHHHCTTSEEEEECTT----------CCCHHHHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEeeccCCCH-HHHHHHHHHHHHHcCCCceEEEECCC----------CcCHHHHHH-HHHHH
Confidence 6888899999999999999886421111 12222233455411234445555321 134544433 33456
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHH-HcCCccEE-ecCCCCHHHHHHHhhcCCceEEeeeccccccccc-cc
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLV-EEGKIKYI-GLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~-~~G~ir~i-GvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~ 195 (273)
+.+++++| ..|-.. +.++.+.+++ +.-.|-=. |=+-++++.++++++....+++|+..+..---.+ ..
T Consensus 219 ~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~~iPIa~dE~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 289 (389)
T 3ozy_A 219 DEAGCYWF-----EEPLSI----DDIEGHRILRAQGTPVRIATGENLYTRNAFNDYIRNDAIDVLQADASRAGGITEALA 289 (389)
T ss_dssp HHTTCSEE-----ESCSCT----TCHHHHHHHHTTCCSSEEEECTTCCHHHHHHHHHHTTCCSEECCCTTTSSCHHHHHH
T ss_pred HhcCCCEE-----ECCCCc----ccHHHHHHHHhcCCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHH
Confidence 77776555 445332 2366777887 65555422 2244678889999988889999998776542212 67
Q ss_pred HHHHHHHhCCeEEecc
Q 024050 196 IIPLCRELGIGIVPYS 211 (273)
Q Consensus 196 l~~~~~~~gi~v~a~s 211 (273)
+...|+++|+.++..+
T Consensus 290 ia~~A~~~gi~~~~h~ 305 (389)
T 3ozy_A 290 ISASAASAHLAWNPHT 305 (389)
T ss_dssp HHHHHHHTTCEECCCC
T ss_pred HHHHHHHcCCEEEecC
Confidence 8999999999998774
No 84
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=85.62 E-value=18 Score=31.75 Aligned_cols=152 Identities=10% Similarity=0.023 Sum_probs=93.1
Q ss_pred CHHHHHHHHHHHHHCCCCcccccc-CCCCC--cHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccC--CHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTAD-VYGQN--ANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKG--APDYVRSC 113 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~-~Yg~g--~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~--~~~~i~~~ 113 (273)
+.++..+....+.+.|++.|..-. ..|.. +....+=+++++.-.+++-|..+... .+ +.+...+-
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~iKik~spvG~~~~~~~~e~v~avr~a~G~d~~l~vDan~----------~~~~~~~~a~~~ 214 (401)
T 2hzg_A 145 TPQETLERARAARRDGFAAVKFGWGPIGRGTVAADADQIMAAREGLGPDGDLMVDVGQ----------IFGEDVEAAAAR 214 (401)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEESTTTTSSCHHHHHHHHHHHHHHHCSSSEEEEECTT----------TTTTCHHHHHTT
T ss_pred CHHHHHHHHHHHHHhCCCeEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEECCC----------CCCCCHHHHHHH
Confidence 678888888889999999887520 02211 11122223344311234555555421 23 45555554
Q ss_pred HHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHH-cCCccEEec-CCCCHHHHHHHhhcCCceEEeeeccccccc
Q 024050 114 CEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVE-EGKIKYIGL-SEASPGTIRRAHAVHPITAVQMEWSLWTRD 191 (273)
Q Consensus 114 ~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~-~G~ir~iGv-S~~~~~~l~~~~~~~~~~~~q~~~~l~~~~ 191 (273)
++. |+.++++++ ..|-.. +.++.+.++++ .-.|-=++- +-++++.++++++....+++|+..+..---
T Consensus 215 ~~~-l~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi 284 (401)
T 2hzg_A 215 LPT-LDAAGVLWL-----EEPFDA----GALAAHAALAGRGARVRIAGGEAAHNFHMAQHLMDYGRIGFIQIDCGRIGGL 284 (401)
T ss_dssp HHH-HHHTTCSEE-----ECCSCT----TCHHHHHHHHTTCCSSEEEECTTCSSHHHHHHHHHHSCCSEEEECHHHHTSH
T ss_pred HHH-HHhcCCCEE-----ECCCCc----cCHHHHHHHHhhCCCCCEEecCCcCCHHHHHHHHHCCCCCEEEeCcchhCCH
Confidence 444 777776654 454322 34777788887 555543333 336788899999888888999877664321
Q ss_pred cc-ccHHHHHHHhCCeEEec
Q 024050 192 IE-EEIIPLCRELGIGIVPY 210 (273)
Q Consensus 192 ~~-~~l~~~~~~~gi~v~a~ 210 (273)
.+ ..+...|+++|+.++..
T Consensus 285 t~~~~i~~~A~~~g~~~~~h 304 (401)
T 2hzg_A 285 GPAKRVADAAQARGITYVNH 304 (401)
T ss_dssp HHHHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHHHHcCCEEecC
Confidence 11 67899999999998876
No 85
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=85.59 E-value=9.1 Score=34.22 Aligned_cols=151 Identities=11% Similarity=0.095 Sum_probs=89.6
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.++..+....+.+.|++.|..--.-......+.+ +++++.-.+++-|...... .++.+...+-++. |
T Consensus 198 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~d~e~v-~avR~a~G~d~~l~vDan~----------~~~~~~a~~~~~~-l 265 (441)
T 2hxt_A 198 SDEKLVRLAKEAVADGFRTIKLKVGANVQDDIRRC-RLARAAIGPDIAMAVDANQ----------RWDVGPAIDWMRQ-L 265 (441)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHH-HHHHHHHCSSSEEEEECTT----------CCCHHHHHHHHHT-T
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCHHHHHHHH-HHHHHhcCCCCeEEEECCC----------CCCHHHHHHHHHH-H
Confidence 67888888889999999987642110001122223 3444411233444433321 2455555544444 6
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHc-CCc-cEEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-cc
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEE-GKI-KYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~-G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~ 195 (273)
+.+++++ +..|-.. +.++.+.++++. +.| -..|=+-++++.++++++....+++|+..+-.---.+ ..
T Consensus 266 ~~~~i~~-----iEqP~~~----~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~ 336 (441)
T 2hxt_A 266 AEFDIAW-----IEEPTSP----DDVLGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQAGAVDLIQIDAARVGGVNENLA 336 (441)
T ss_dssp GGGCCSC-----EECCSCT----TCHHHHHHHHHHHTTSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTTSSHHHHHHH
T ss_pred HhcCCCe-----eeCCCCH----HHHHHHHHHHhhCCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEeCcceeCCHHHHHH
Confidence 6666554 4455332 245666777765 223 2334456788999999988888999987776532112 67
Q ss_pred HHHHHHHhCCeEEec
Q 024050 196 IIPLCRELGIGIVPY 210 (273)
Q Consensus 196 l~~~~~~~gi~v~a~ 210 (273)
+...|+++|+.+...
T Consensus 337 ia~~A~~~g~~~~~h 351 (441)
T 2hxt_A 337 ILLLAAKFGVRVFPH 351 (441)
T ss_dssp HHHHHHHTTCEECCC
T ss_pred HHHHHHHcCCeEEEe
Confidence 889999999998543
No 86
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=85.58 E-value=7.7 Score=34.28 Aligned_cols=150 Identities=11% Similarity=0.130 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHHC-CCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 40 EEDGISMIKHAFSK-GITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 40 ~~~~~~~l~~A~~~-Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
.++..+.++.+++. |++.|=.--.... ..+...=+++++.- .++-|..-... .++.+...+ +-+.|
T Consensus 169 ~e~~~~~a~~~~~~~G~~~~K~KvG~~~-~~d~~~v~avR~~~-~~~~l~vDaN~----------~w~~~~A~~-~~~~l 235 (398)
T 4dye_A 169 PKAMAEHAVRVVEEGGFDAVKLKGTTDC-AGDVAILRAVREAL-PGVNLRVDPNA----------AWSVPDSVR-AGIAL 235 (398)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEECCSCH-HHHHHHHHHHHHHC-TTSEEEEECTT----------CSCHHHHHH-HHHHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEecCCCH-HHHHHHHHHHHHhC-CCCeEEeeCCC----------CCCHHHHHH-HHHHH
Confidence 57888888888998 9997654322111 12222333555522 45555444321 134444332 23455
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-ccH
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l 196 (273)
+.++++ ++..|-. .++.+.++++.-.|- ..|=|-++.+.++++++...++++|+..+-.---.+ ..+
T Consensus 236 ~~~~i~-----~iEqP~~------d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~i 304 (398)
T 4dye_A 236 EELDLE-----YLEDPCV------GIEGMAQVKAKVRIPLCTNMCVVRFEDFAPAMRLNAVDVIHGDVYKWGGIAATKAL 304 (398)
T ss_dssp GGGCCS-----EEECCSS------HHHHHHHHHHHCCSCEEESSSCCSGGGHHHHHHTTCCSEEEECHHHHTSHHHHHHH
T ss_pred hhcCCC-----EEcCCCC------CHHHHHHHHhhCCCCEEeCCcCCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHH
Confidence 655544 4445432 577888888765443 334456788889999998888999987766532111 678
Q ss_pred HHHHHHhCCeEEecccC
Q 024050 197 IPLCRELGIGIVPYSPL 213 (273)
Q Consensus 197 ~~~~~~~gi~v~a~spl 213 (273)
...|+++|+.++..+.+
T Consensus 305 a~~A~~~gi~~~~h~~~ 321 (398)
T 4dye_A 305 AAHCETFGLGMNLHSGG 321 (398)
T ss_dssp HHHHHHHTCEEEECCSC
T ss_pred HHHHHHcCCeEEEcCCc
Confidence 99999999999988744
No 87
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=85.39 E-value=8.2 Score=34.02 Aligned_cols=157 Identities=12% Similarity=0.047 Sum_probs=94.4
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCC--------CcHHHHHHHHHhc-CCCCCEEEEeccCcCCCCCccccccCCHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQ--------NANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDY 109 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~--------g~se~~lg~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~ 109 (273)
+.++..+.++.+++.|++.|=.--.... -..+...=+++++ .+ ++-|..=... .++.+.
T Consensus 165 ~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~~~~~~~~~di~~v~avR~a~~--d~~L~vDaN~----------~w~~~~ 232 (393)
T 3u9i_A 165 SVTAAARAAQAIVARGVTTIKIKIGAGDPDATTIRTMEHDLARIVAIRDVAP--TARLILDGNC----------GYTAPD 232 (393)
T ss_dssp -CHHHHHHHHHHHTTTCCEEEEECC-------CHHHHHHHHHHHHHHHHHST--TSEEEEECCS----------CCCHHH
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEeCCCcccccccccHHHHHHHHHHHHHHCC--CCeEEEEccC----------CCCHHH
Confidence 5677888888889999987643221110 0012222234444 43 2333322211 234433
Q ss_pred HHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCc-cEEecCCCCHHHHHHHhhcCCceEEeeecccc
Q 024050 110 VRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPGTIRRAHAVHPITAVQMEWSLW 188 (273)
Q Consensus 110 i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~ 188 (273)
..+.+++|.-+.+++.++..|-...+ ++.+.+|.++-.| -+.|=|.++...+.++++...++++|+..+.
T Consensus 233 ----A~~~~~~L~~~~~~i~~iEeP~~~~d----~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~i~~k~~~- 303 (393)
T 3u9i_A 233 ----ALRLLDMLGVHGIVPALFEQPVAKDD----EEGLRRLTATRRVPVAADESVASATDAARLARNAAVDVLNIKLMK- 303 (393)
T ss_dssp ----HHHHHHTTTTTTCCCSEEECCSCTTC----TTHHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHH-
T ss_pred ----HHHHHHHHhhCCCCeEEEECCCCCCc----HHHHHHHHhhCCCcEEeCCcCCCHHHHHHHHHcCCCCEEEecccc-
Confidence 23345555324567888888855333 4566677765444 3456667889999999988889999998776
Q ss_pred ccccc-ccHHHHHHHhCCeEEecccCCCc
Q 024050 189 TRDIE-EEIIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 189 ~~~~~-~~l~~~~~~~gi~v~a~spl~~G 216 (273)
---.+ ..+...|+++|+.++..+.+..+
T Consensus 304 GGit~~~~ia~~A~~~gi~~~~~~~~es~ 332 (393)
T 3u9i_A 304 CGIVEALDIAAIARTAGLHLMIGGMVESL 332 (393)
T ss_dssp HCHHHHHHHHHHHHHHTCEEEECCSSCCH
T ss_pred cCHHHHHHHHHHHHHcCCeEEecCCcccH
Confidence 32112 67899999999999988776544
No 88
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=85.12 E-value=12 Score=32.79 Aligned_cols=151 Identities=10% Similarity=-0.028 Sum_probs=90.9
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCC-CcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQ-NANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~-g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
+.++..+..+.+.+.|++.|..--.-+. ....+.+ +++++.-.+++-|...... .++.+...+-++.
T Consensus 165 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v-~avr~a~g~~~~l~vDan~----------~~~~~~a~~~~~~- 232 (392)
T 1tzz_A 165 GLSMLRGEMRGYLDRGYNVVKMKIGGAPIEEDRMRI-EAVLEEIGKDAQLAVDANG----------RFNLETGIAYAKM- 232 (392)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECSSSCHHHHHHHH-HHHHHHHTTTCEEEEECTT----------CCCHHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHH-HHHHHhcCCCCeEEEECCC----------CCCHHHHHHHHHH-
Confidence 5777888888889999988764211110 0122333 3444311234445444321 2455555544444
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec-CCCCHHHHHHHhhcC----CceEEeeecccccccc
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPGTIRRAHAVH----PITAVQMEWSLWTRDI 192 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv-S~~~~~~l~~~~~~~----~~~~~q~~~~l~~~~~ 192 (273)
|+.+++++ +..|-.. +.++.+.+++++-.|-=.+- +-++++.++++++.. ..+++|+..+..---.
T Consensus 233 l~~~~i~~-----iEqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~~~~~d~v~ik~~~~GGit 303 (392)
T 1tzz_A 233 LRDYPLFW-----YEEVGDP----LDYALQAALAEFYPGPMATGENLFSHQDARNLLRYGGMRPDRDWLQFDCALSYGLC 303 (392)
T ss_dssp HTTSCCSE-----EECCSCT----TCHHHHHHHTTTCCSCEEECTTCCSHHHHHHHHHHSCCCTTTCEECCCTTTTTCHH
T ss_pred HHHcCCCe-----ecCCCCh----hhHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCccCCcEEEECccccCCHH
Confidence 66666554 4455332 34777778877655543332 346888899999887 7889998777654221
Q ss_pred c-ccHHHHHHHhCCe---EEec
Q 024050 193 E-EEIIPLCRELGIG---IVPY 210 (273)
Q Consensus 193 ~-~~l~~~~~~~gi~---v~a~ 210 (273)
+ ..+...|+++|+. ++..
T Consensus 304 ~~~~i~~~A~~~gi~~~~~~~~ 325 (392)
T 1tzz_A 304 EYQRTLEVLKTHGWSPSRCIPH 325 (392)
T ss_dssp HHHHHHHHHHHTTCCGGGBCCS
T ss_pred HHHHHHHHHHHCCCCCceEeec
Confidence 2 6789999999999 7776
No 89
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=84.35 E-value=9.2 Score=33.46 Aligned_cols=150 Identities=9% Similarity=0.023 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHHCCCCccccccCCCC-CcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHH
Q 024050 41 EDGISMIKHAFSKGITFFDTADVYGQ-NANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLK 119 (273)
Q Consensus 41 ~~~~~~l~~A~~~Gin~~DtA~~Yg~-g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~ 119 (273)
++..+....+.+.|++.|..--.-+. ....+.+ +++++.-.+++-|...... .++.+...+-++. |+
T Consensus 141 e~~~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v-~avR~a~G~d~~l~vDan~----------~~~~~~a~~~~~~-l~ 208 (382)
T 2gdq_A 141 SRSVSNVEAQLKKGFEQIKVKIGGTSFKEDVRHI-NALQHTAGSSITMILDANQ----------SYDAAAAFKWERY-FS 208 (382)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECSSSCHHHHHHHH-HHHHHHHCTTSEEEEECTT----------CCCHHHHHTTHHH-HT
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHH-HHHHHhhCCCCEEEEECCC----------CCCHHHHHHHHHH-Hh
Confidence 77778888888999988775221110 0122333 3444311234445544321 2345444433332 44
Q ss_pred HcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEe-cCCCCHHHHHHHhhcCCceEEeeeccccccccc-ccHH
Q 024050 120 RLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIG-LSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEII 197 (273)
Q Consensus 120 ~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iG-vS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l~ 197 (273)
.+ -++.++..|-.. +.++.+.+++++-.|-=.+ =+-++++.++++++....+++|+..+-.---.+ ..+.
T Consensus 209 ~~----~~i~~iEqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~ 280 (382)
T 2gdq_A 209 EW----TNIGWLEEPLPF----DQPQDYAMLRSRLSVPVAGGENMKGPAQYVPLLSQRCLDIIQPDVMHVNGIDEFRDCL 280 (382)
T ss_dssp TC----SCEEEEECCSCS----SCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHH
T ss_pred hc----cCCeEEECCCCc----ccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHH
Confidence 44 045566666432 2467777887765554333 244688899999988888999997776532112 6789
Q ss_pred HHHHHhCCeEEec
Q 024050 198 PLCRELGIGIVPY 210 (273)
Q Consensus 198 ~~~~~~gi~v~a~ 210 (273)
..|+++|+.++..
T Consensus 281 ~~A~~~g~~~~~~ 293 (382)
T 2gdq_A 281 QLARYFGVRASAH 293 (382)
T ss_dssp HHHHHHTCEECCC
T ss_pred HHHHHcCCEEeec
Confidence 9999999998877
No 90
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=84.34 E-value=5.7 Score=34.44 Aligned_cols=157 Identities=9% Similarity=0.021 Sum_probs=94.3
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.++..+..+.+++.|++.|..--.-.. ..+...=+++++.-..++-|...... .++.+...+ +-+.|
T Consensus 140 ~~~~~~~~a~~~~~~G~~~~K~K~G~~~-~~d~~~v~avR~~~g~~~~l~vDan~----------~~~~~~a~~-~~~~l 207 (356)
T 3ro6_B 140 PVEETLAEAREHLALGFRVLKVKLCGDE-EQDFERLRRLHETLAGRAVVRVDPNQ----------SYDRDGLLR-LDRLV 207 (356)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSCH-HHHHHHHHHHHHHHTTSSEEEEECTT----------CCCHHHHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeCCCH-HHHHHHHHHHHHHhCCCCEEEEeCCC----------CCCHHHHHH-HHHHH
Confidence 5788888889999999998875432111 12222234455421234445544322 134444332 33566
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcC-CceEEeeeccccccccc-cc
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVH-PITAVQMEWSLWTRDIE-EE 195 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~-~~~~~q~~~~l~~~~~~-~~ 195 (273)
+.+++++|. .|-... .++.+.+++++-.|- ..|=+-++.+.++++++.. ..+++|+..+-.---.+ ..
T Consensus 208 ~~~~i~~iE-----qP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ 278 (356)
T 3ro6_B 208 QELGIEFIE-----QPFPAG----RTDWLRALPKAIRRRIAADESLLGPADAFALAAPPAACGIFNIKLMKCGGLAPARR 278 (356)
T ss_dssp HHTTCCCEE-----CCSCTT----CHHHHHTSCHHHHHTEEESTTCCSHHHHHHHHSSSCSCSEEEECHHHHCSHHHHHH
T ss_pred HhcCCCEEE-----CCCCCC----cHHHHHHHHhcCCCCEEeCCcCCCHHHHHHHHhcCCcCCEEEEcccccCCHHHHHH
Confidence 777766554 443322 355666665543332 3344567888999999888 88999987765432111 67
Q ss_pred HHHHHHHhCCeEEecccCCCc
Q 024050 196 IIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (273)
+...|+++|+.++..+.+..+
T Consensus 279 i~~~a~~~gi~~~~~~~~es~ 299 (356)
T 3ro6_B 279 IATIAETAGIDLMWGCMDESR 299 (356)
T ss_dssp HHHHHHHHTCEEEECCCSCCH
T ss_pred HHHHHHHcCCEEEecCCcccH
Confidence 899999999999987666443
No 91
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae}
Probab=83.52 E-value=17 Score=32.57 Aligned_cols=154 Identities=13% Similarity=0.152 Sum_probs=92.8
Q ss_pred CCHHHHHHHHHHHHHC-CCCccccccCCCCCcHHHHHHHHHhc-CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHH
Q 024050 38 VSEEDGISMIKHAFSK-GITFFDTADVYGQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCE 115 (273)
Q Consensus 38 ~~~~~~~~~l~~A~~~-Gin~~DtA~~Yg~g~se~~lg~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~ 115 (273)
.+.++..+..+.+++. |++.|=.--.......+...=+++++ . .++-|..-... .++.+.. .
T Consensus 190 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea~--~~~~L~vDaN~----------~w~~~~A----i 253 (445)
T 3va8_A 190 LDPEGVVKQAKKIIDEYGFKAIKLKGGVFPPADEVAAIKALHKAF--PGVPLRLDPNA----------AWTVETS----K 253 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSCEEEECSSSCHHHHHHHHHHHHHHS--TTCCEEEECTT----------CBCHHHH----H
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCCCCHHHHHHHHHHHHHhC--CCCcEeeeCCC----------CCCHHHH----H
Confidence 4778888888888875 99876543211110112222234554 4 33333322211 1333322 2
Q ss_pred HHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-
Q 024050 116 ASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE- 193 (273)
Q Consensus 116 ~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~- 193 (273)
+.+++|. ++ +.++..|- + .++.+.++++.-.|- +.|=|.++...+.++++...++++|+..+-.---.+
T Consensus 254 ~~~~~L~-~~--l~~iEeP~---~---d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~div~~d~~~~GGitea 324 (445)
T 3va8_A 254 WVAKELE-GI--VEYLEDPA---G---EIEGMAAVAKEASMPLATNMAVVAFDHLPPSILQDAVQVILSDHHFWGGLRKS 324 (445)
T ss_dssp HHHHHTT-TT--CSEEESCB---S---HHHHHHHHHTTCSSCEEESSSCCSGGGHHHHHHTTCCSEEEECHHHHTSHHHH
T ss_pred HHHHHHh-hh--cCeEeecC---c---CHHHHHHHHHcCCCCEEeCCccCCHHHHHHHHHcCCCCEEEecchhcCCHHHH
Confidence 3445554 44 66777773 2 477788887764443 445566888889999988888999987665432111
Q ss_pred ccHHHHHHHhCCeEEecccCCCc
Q 024050 194 EEIIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 194 ~~l~~~~~~~gi~v~a~spl~~G 216 (273)
..+...|+++|+.+...+....|
T Consensus 325 ~kia~lA~~~gv~v~~h~~~e~~ 347 (445)
T 3va8_A 325 QTLASICATWGLRLSMHSNSHLG 347 (445)
T ss_dssp HHHHHHHHHHTCEEEECCCSCCH
T ss_pred HHHHHHHHHcCCEEEEeCCcccH
Confidence 67899999999999988766443
No 92
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=83.52 E-value=11 Score=32.84 Aligned_cols=156 Identities=10% Similarity=0.057 Sum_probs=89.2
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.++..+..+.+++.|++.|-.--.-..-..+...=+++++.-..++-|....... ++.+... .+-+.|
T Consensus 146 ~~~~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~~g~~~~l~vDan~~----------~~~~~A~-~~~~~l 214 (377)
T 3my9_A 146 DFDADLERMRAMVPAGHTVFKMKTGVKPHAEELRILETMRGEFGERIDLRLDFNQA----------LTPFGAM-KILRDV 214 (377)
T ss_dssp SHHHHHHHHHHHTTTTCCEEEEECSSSCHHHHHHHHHHHHHHHGGGSEEEEECTTC----------CCTTTHH-HHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCcHHHHHHHHHHHHHHhCCCCeEEEeCCCC----------cCHHHHH-HHHHHH
Confidence 56666777788888899987653211100122222334554111344444443211 2222222 234455
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-ccH
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l 196 (273)
+.+++++| ..|-.. +.++.+.++++.-.|. ..|=+-++.+.++++++....+++|+..+-.---.+ ..+
T Consensus 215 ~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~i 285 (377)
T 3my9_A 215 DAFRPTFI-----EQPVPR----RHLDAMAGFAAALDTPILADESCFDAVDLMEVVRRQAADAISVKIMKCGGLMKAQSL 285 (377)
T ss_dssp HTTCCSCE-----ECCSCT----TCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEEECCHHHHTSHHHHHHH
T ss_pred hhcCCCEE-----ECCCCc----cCHHHHHHHHHhCCCCEEECCccCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHH
Confidence 66665554 344332 2367777777764443 334456788899999988888899987665432111 678
Q ss_pred HHHHHHhCCeEEecccCC
Q 024050 197 IPLCRELGIGIVPYSPLG 214 (273)
Q Consensus 197 ~~~~~~~gi~v~a~spl~ 214 (273)
...|+++|+.++..+.+.
T Consensus 286 ~~~a~~~gi~~~~~~~~e 303 (377)
T 3my9_A 286 MAIADTAGLPGYGGTLWE 303 (377)
T ss_dssp HHHHHHHTCCEECCEECC
T ss_pred HHHHHHcCCeEecCCCCC
Confidence 999999999997655443
No 93
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=83.34 E-value=16 Score=32.13 Aligned_cols=150 Identities=12% Similarity=0.050 Sum_probs=92.1
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc-CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
+.++..+.++.+++.|++.|=.-- +.+...+.+. ++++ . .++-|..=... .++.+....
T Consensus 149 ~~e~~~~~~~~~~~~G~~~~K~Kv--~~~~d~~~v~-avR~~~--~~~~l~vDaN~----------~~~~~~A~~----- 208 (388)
T 3qld_A 149 SLDVLIQSVDAAVEQGFRRVKLKI--APGRDRAAIK-AVRLRY--PDLAIAADANG----------SYRPEDAPV----- 208 (388)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEC--BTTBSHHHHH-HHHHHC--TTSEEEEECTT----------CCCGGGHHH-----
T ss_pred CHHHHHHHHHHHHHhCCCeEEEEe--CcHHHHHHHH-HHHHHC--CCCeEEEECCC----------CCChHHHHH-----
Confidence 478889999999999998754321 2223344443 4544 4 33444333221 123333322
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCc-cEEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-cc
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~ 195 (273)
+++| +..++.++..|-...+ ++.+.+|.+.-.| -..|=|.++...+.++++...++++|+..+..---.+ ..
T Consensus 209 ~~~l--~~~~i~~iEeP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~ 282 (388)
T 3qld_A 209 LRQL--DAYDLQFIEQPLPEDD----WFDLAKLQASLRTPVCLDESVRSVRELKLTARLGAARVLNVKPGRLGGFGATLR 282 (388)
T ss_dssp HHHG--GGGCCSCEECCSCTTC----HHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHH
T ss_pred HHHH--hhCCCcEEECCCCccc----HHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEECchhhCCHHHHHH
Confidence 3333 2345667777754333 5566777665444 3456567888999999988888899997766432111 67
Q ss_pred HHHHHHHhCCeEEecccCC
Q 024050 196 IIPLCRELGIGIVPYSPLG 214 (273)
Q Consensus 196 l~~~~~~~gi~v~a~spl~ 214 (273)
+...|+++|+.++..+.+.
T Consensus 283 ia~~A~~~gi~~~~~~~~e 301 (388)
T 3qld_A 283 ALDVAGEAGMAAWVGGMYE 301 (388)
T ss_dssp HHHHHHHTTCEEEECCCCC
T ss_pred HHHHHHHCCCeEEecCccc
Confidence 8999999999998776544
No 94
>3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A*
Probab=82.75 E-value=21 Score=32.03 Aligned_cols=153 Identities=11% Similarity=0.143 Sum_probs=91.7
Q ss_pred CCHHHHHHHHHHHHHC-CCCccccccCCCCCcHHHHHHHHHhc-CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHH
Q 024050 38 VSEEDGISMIKHAFSK-GITFFDTADVYGQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCE 115 (273)
Q Consensus 38 ~~~~~~~~~l~~A~~~-Gin~~DtA~~Yg~g~se~~lg~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~ 115 (273)
.+.++..+..+.+++. |++.|=.--.......+...=+++++ . .++-|..-... .++.+. ..
T Consensus 192 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea~--~d~~L~vDaN~----------~w~~~~----Ai 255 (445)
T 3vdg_A 192 LDPDGIVAQARRMIDEYGFSAIKLKGGVFAPEEEMAAVEALRAAF--PDHPLRLDPNA----------AWTPQT----SV 255 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEECSSSCHHHHHHHHHHHHHHC--TTSCEEEECTT----------CSCHHH----HH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCCCCHHHHHHHHHHHHHhC--CCCcEEEECCC----------CCCHHH----HH
Confidence 4778888888888875 99876542211110112222245555 4 33333322111 134332 23
Q ss_pred HHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeecccccccc-c
Q 024050 116 ASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDI-E 193 (273)
Q Consensus 116 ~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~-~ 193 (273)
+.+++|. ++ +.++..|-. .++.+.++++.-.|. +.|=|.++...+.++++...++++|+..+-.---. -
T Consensus 256 ~~~~~L~-~~--l~~iEeP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~div~~d~~~~GGitea 326 (445)
T 3vdg_A 256 KVAAGLE-GV--LEYLEDPTP------GLDGMAEVAAQAPMPLATNMCVVAFDQLPAAVAKNSVQVVLSDHHYWGGLQRS 326 (445)
T ss_dssp HHHHHTT-TT--CSEEECCSS------SHHHHHHHHHHCSSCEEESSSCCSGGGHHHHHHHTCCSEEEECHHHHTSHHHH
T ss_pred HHHHHHh-hH--HHeeeCCCC------CHHHHHHHHhcCCCCEEcCCcCCCHHHHHHHHHcCCCCEEeeCcceeCCHHHH
Confidence 3445554 44 777777742 256777777664432 44556688888999988888899998766543211 1
Q ss_pred ccHHHHHHHhCCeEEecccCCC
Q 024050 194 EEIIPLCRELGIGIVPYSPLGR 215 (273)
Q Consensus 194 ~~l~~~~~~~gi~v~a~spl~~ 215 (273)
..+...|+++|+.+...+....
T Consensus 327 ~kia~lA~~~gv~v~~h~~~e~ 348 (445)
T 3vdg_A 327 RLLAGICDTFGLGLSMHSNSHL 348 (445)
T ss_dssp HHHHHHHHHHTCEEEECCCSCC
T ss_pred HHHHHHHHHcCCEEEEeCCcch
Confidence 6789999999999998876543
No 95
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=82.43 E-value=25 Score=30.78 Aligned_cols=155 Identities=14% Similarity=0.062 Sum_probs=92.5
Q ss_pred CHHHHHHHHHHHHHC-CCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSK-GITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~-Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
+.++..+.++.+++. |++.|-.--....-..+...=+++++.-..++-|...... .++.+...+ +-+.
T Consensus 167 ~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~d~~~v~avR~a~G~~~~l~vDaN~----------~~~~~~A~~-~~~~ 235 (383)
T 3toy_A 167 DARDDERTLRTACDEHGFRAIKSKGGHGDLATDEAMIKGLRALLGPDIALMLDFNQ----------SLDPAEATR-RIAR 235 (383)
T ss_dssp CHHHHHHHHHHHHHTSCCCEEEEECCSSCHHHHHHHHHHHHHHHCTTSEEEEECTT----------CSCHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHccCCcEEEEecCCCCHHHHHHHHHHHHHHhCCCCeEEEeCCC----------CCCHHHHHH-HHHH
Confidence 678888899999999 9998764321111012222334555411234444444321 134444333 3345
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-cc
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~ 195 (273)
|+.++++ ++..|-... .++.+.++++.-.|- ..|=|-++...++++++....+++|+..+-.---.+ ..
T Consensus 236 l~~~~i~-----~iEeP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~ 306 (383)
T 3toy_A 236 LADYDLT-----WIEEPVPQE----NLSGHAAVRERSEIPIQAGENWWFPRGFAEAIAAGASDFIMPDLMKVGGITGWLN 306 (383)
T ss_dssp HGGGCCS-----EEECCSCTT----CHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTCCSEECCCTTTTTHHHHHHH
T ss_pred HHhhCCC-----EEECCCCcc----hHHHHHHHHhhcCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHH
Confidence 5556544 445554332 356677777765443 334456788889999988888999987776532111 67
Q ss_pred HHHHHHHhCCeEEecccC
Q 024050 196 IIPLCRELGIGIVPYSPL 213 (273)
Q Consensus 196 l~~~~~~~gi~v~a~spl 213 (273)
+...|+++|+.+...+.+
T Consensus 307 ia~~A~~~gi~~~~h~~~ 324 (383)
T 3toy_A 307 VAGQADAASIPMSSHILP 324 (383)
T ss_dssp HHHHHHHHTCCBCCCSCH
T ss_pred HHHHHHHcCCEEeecCHH
Confidence 899999999999866544
No 96
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=82.30 E-value=18 Score=31.63 Aligned_cols=152 Identities=14% Similarity=0.075 Sum_probs=92.7
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.++..+.++.+.+.|++.|-.-- ++....+.+ +++++.- .++-|..-... .++.+.. + .+
T Consensus 161 ~~e~~~~~a~~~~~~G~~~~KiKv--g~~~d~~~v-~avr~a~-~~~~l~vDaN~----------~~~~~~a-~----~~ 221 (393)
T 1wuf_A 161 NVETLLQLVNQYVDQGYERVKLKI--APNKDIQFV-EAVRKSF-PKLSLMADANS----------AYNREDF-L----LL 221 (393)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEEC--BTTBSHHHH-HHHHTTC-TTSEEEEECTT----------CCCGGGH-H----HH
T ss_pred CHHHHHHHHHHHHHHhhHhheecc--ChHHHHHHH-HHHHHHc-CCCEEEEECCC----------CCCHHHH-H----HH
Confidence 467778888888899998764311 122334444 4666522 35544443321 1334333 2 33
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-ccH
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l 196 (273)
++| +..++.++..|-...+ ++.+.+|.++-.|- ..|=|-++...++++++....+++|+..+-.---.+ ..+
T Consensus 222 ~~l--~~~~i~~iEqP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~i 295 (393)
T 1wuf_A 222 KEL--DQYDLEMIEQPFGTKD----FVDHAWLQKQLKTRICLDENIRSVKDVEQAHSIGSCRAINLKLARVGGMSSALKI 295 (393)
T ss_dssp HTT--GGGTCSEEECCSCSSC----SHHHHHHHTTCSSEEEECTTCCSHHHHHHHHHHTCCSEEEECTGGGTSHHHHHHH
T ss_pred HHH--HhCCCeEEECCCCCcC----HHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCCEEEeChhhhCCHHHHHHH
Confidence 333 2346667777754333 45666776654443 233355788899999988888899998776532212 678
Q ss_pred HHHHHHhCCeEEecccCCC
Q 024050 197 IPLCRELGIGIVPYSPLGR 215 (273)
Q Consensus 197 ~~~~~~~gi~v~a~spl~~ 215 (273)
...|+++|+.++..+.+..
T Consensus 296 a~~A~~~gi~~~~~~~~es 314 (393)
T 1wuf_A 296 AEYCALNEILVWCGGMLEA 314 (393)
T ss_dssp HHHHHHTTCEEEECCCCCC
T ss_pred HHHHHHcCCeEEecCCccc
Confidence 8999999999988766544
No 97
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=82.27 E-value=12 Score=32.56 Aligned_cols=154 Identities=14% Similarity=0.155 Sum_probs=91.8
Q ss_pred CHHHHHHHHHHHHHCCCCccccccC-CCCC-cHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCC-HHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADV-YGQN-ANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGA-PDYVRSCCE 115 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~-Yg~g-~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~-~~~i~~~~~ 115 (273)
+.++..+..+.+.+.|++.|..--. +|.. ......=+++++.-..++-|...... .++ .+...+ +-
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKlk~g~~g~~~~~d~~~v~avR~a~g~~~~l~vDan~----------~~~d~~~A~~-~~ 214 (374)
T 3sjn_A 146 KPEDNVAIVQGLKDQGFSSIKFGGGVMGDDPDTDYAIVKAVREAAGPEMEVQIDLAS----------KWHTCGHSAM-MA 214 (374)
T ss_dssp SGGGGHHHHHHHHTTTCSEEEEECTTTTSCHHHHHHHHHHHHHHHCSSSEEEEECTT----------TTCSHHHHHH-HH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCCCCCHHHHHHHHHHHHHHhCCCCeEEEECCC----------CCCCHHHHHH-HH
Confidence 3477888888999999998876432 2110 12222233455421234444444321 133 443332 23
Q ss_pred HHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccE-EecCCCCHHHHHHHhhcCCceEEeeeccccccccc-
Q 024050 116 ASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY-IGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE- 193 (273)
Q Consensus 116 ~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~-iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~- 193 (273)
+.|+.++++++ ..|-.. +.++.+.++++.-.|-= .|=+-++.+.++++++....+++|+..+-.---.+
T Consensus 215 ~~l~~~~i~~i-----EqP~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~ 285 (374)
T 3sjn_A 215 KRLEEFNLNWI-----EEPVLA----DSLISYEKLSRQVSQKIAGGESLTTRYEFQEFITKSNADIVQPDITRCGGITEM 285 (374)
T ss_dssp HHSGGGCCSEE-----ECSSCT----TCHHHHHHHHHHCSSEEEECTTCCHHHHHHHHHHHHCCSEECCBTTTSSHHHHH
T ss_pred HHhhhcCceEE-----ECCCCc----ccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHH
Confidence 35555655444 455332 23677788887655542 23345778888898888788899987776542111
Q ss_pred ccHHHHHHHhCCeEEeccc
Q 024050 194 EEIIPLCRELGIGIVPYSP 212 (273)
Q Consensus 194 ~~l~~~~~~~gi~v~a~sp 212 (273)
..+...|+++|+.+...+.
T Consensus 286 ~~ia~~A~~~gi~~~~h~~ 304 (374)
T 3sjn_A 286 KKIYDIAQMNGTQLIPHGF 304 (374)
T ss_dssp HHHHHHHHHHTCEECCBCC
T ss_pred HHHHHHHHHcCCEEEecCC
Confidence 6789999999999988776
No 98
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=81.48 E-value=22 Score=31.51 Aligned_cols=153 Identities=12% Similarity=0.089 Sum_probs=95.0
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCC--C----cHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQ--N----ANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRS 112 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~--g----~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~ 112 (273)
+.++..+..+.+.+.|++.|..--..++ | +.....=+++++.-..++-|...... .++.+...+
T Consensus 179 ~~e~~~~~a~~~~~~Gf~~iKik~g~gp~dg~~~~~~die~v~avReavG~d~~L~vDaN~----------~~~~~~Ai~ 248 (412)
T 3stp_A 179 SIEAMQKEAEEAMKGGYKAFKSRFGYGPKDGMPGMRENLKRVEAVREVIGYDNDLMLECYM----------GWNLDYAKR 248 (412)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHHHCSSSEEEEECTT----------CSCHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCcccccchHHHHHHHHHHHHHHcCCCCeEEEECCC----------CCCHHHHHH
Confidence 6788888999999999998876533321 1 11112223444411234445544321 134544443
Q ss_pred HHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccc
Q 024050 113 CCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRD 191 (273)
Q Consensus 113 ~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~ 191 (273)
- -+.|+.++++++ ..|-.. +.++.+.+++++-.|- ..|=+-++...++++++....+++|+..+-.---
T Consensus 249 ~-~~~Le~~~i~~i-----EeP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~li~~~a~D~v~ik~~~~GGi 318 (412)
T 3stp_A 249 M-LPKLAPYEPRWL-----EEPVIA----DDVAGYAELNAMNIVPISGGEHEFSVIGCAELINRKAVSVLQYDTNRVGGI 318 (412)
T ss_dssp H-HHHHGGGCCSEE-----ECCSCT----TCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTHH
T ss_pred H-HHHHHhcCCCEE-----ECCCCc----ccHHHHHHHHhCCCCCEEeCCCCCCHHHHHHHHHcCCCCEEecChhhcCCH
Confidence 2 345666665544 455332 2467778888876554 2233557889999999988899999877665321
Q ss_pred cc-ccHHHHHHHhCCeEEecc
Q 024050 192 IE-EEIIPLCRELGIGIVPYS 211 (273)
Q Consensus 192 ~~-~~l~~~~~~~gi~v~a~s 211 (273)
.+ ..+...|+++|+.++..+
T Consensus 319 t~a~kia~~A~a~gi~v~~h~ 339 (412)
T 3stp_A 319 TAAQKINAIAEAAQIPVIPHA 339 (412)
T ss_dssp HHHHHHHHHHHHHTCCBCCSS
T ss_pred HHHHHHHHHHHHcCCEEEecc
Confidence 11 678999999999998776
No 99
>3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A
Probab=81.00 E-value=23 Score=31.70 Aligned_cols=153 Identities=14% Similarity=0.165 Sum_probs=91.5
Q ss_pred CCHHHHHHHHHHHHHC-CCCccccccCCCCCcHHHHHHHHHhc-CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHH
Q 024050 38 VSEEDGISMIKHAFSK-GITFFDTADVYGQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCE 115 (273)
Q Consensus 38 ~~~~~~~~~l~~A~~~-Gin~~DtA~~Yg~g~se~~lg~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~ 115 (273)
.+.++..+..+.+++. |++.|=.=-.......+...=+++++ . .++-|..-... .++.+. ..
T Consensus 187 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~rv~avRea~--pd~~L~vDaN~----------~w~~~~----Ai 250 (441)
T 3vc5_A 187 LDPDGIVAQARLLIGEYGFRSIKLKGGVFPPEQEAEAIQALRDAF--PGLPLRLDPNA----------AWTVET----SI 250 (441)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEECSSSCHHHHHHHHHHHHHHS--TTCCEEEECTT----------CSCHHH----HH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCCCCHHHHHHHHHHHHHhC--CCCcEeccCCC----------CCCHHH----HH
Confidence 4678888888888874 99876532211110112222234554 4 33333332211 133332 23
Q ss_pred HHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCc-cEEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-
Q 024050 116 ASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE- 193 (273)
Q Consensus 116 ~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~- 193 (273)
+.+++|. ++ +.++..|-. .++.+.++.+.-.| -+.|=|.++...+.++++...++++|+..+-.---.+
T Consensus 251 ~~~~~L~-~~--l~~iEeP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~dii~~d~~~~GGitea 321 (441)
T 3vc5_A 251 RVGRALD-GV--LEYLEDPTP------GIDGMARVAAEVPMPLATNMCVVTPEHLPAAVERRPIGVLLIDHHYWGGLVRS 321 (441)
T ss_dssp HHHHHTT-TT--CSEEECCSS------SHHHHHHHHTTSSSCEEESSSCCSGGGHHHHHHHCCCSEEEECHHHHTSHHHH
T ss_pred HHHHHHH-HH--HHHhhccCC------CHHHHHHHHhcCCCCEEeCCCCCCHHHHHHHHHhCCCCEEeechhhcCCHHHH
Confidence 3455564 44 777777742 25677777765433 2455566888889998888888999987655432111
Q ss_pred ccHHHHHHHhCCeEEecccCCC
Q 024050 194 EEIIPLCRELGIGIVPYSPLGR 215 (273)
Q Consensus 194 ~~l~~~~~~~gi~v~a~spl~~ 215 (273)
..+...|+++|+.+...+....
T Consensus 322 ~kia~lA~~~gv~v~~h~~~e~ 343 (441)
T 3vc5_A 322 AHIATLCATFGIELSMHSNSHL 343 (441)
T ss_dssp HHHHHHHHHTTCEEEECCCSCC
T ss_pred HHHHHHHHHcCCEEEecCCccc
Confidence 6789999999999998876543
No 100
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=80.55 E-value=26 Score=30.49 Aligned_cols=157 Identities=8% Similarity=-0.033 Sum_probs=86.8
Q ss_pred CHHHHHHHHHHHHH-CCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFS-KGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 39 ~~~~~~~~l~~A~~-~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
+.++..+....+++ .|++.|-.--.-..-..+...=+++++.-.+++-|....... ++.+...+ +-+.
T Consensus 147 ~~~~~~~~~~~~~~~~G~~~~KiKvg~~~~~~d~~~v~avR~a~g~~~~l~vDaN~~----------~~~~~A~~-~~~~ 215 (381)
T 3fcp_A 147 DTAKDIAEGEKLLAEGRHRAFKLKIGARELATDLRHTRAIVEALGDRASIRVDVNQA----------WDAATGAK-GCRE 215 (381)
T ss_dssp CHHHHHHHHHHHTC----CEEEEECCSSCHHHHHHHHHHHHHHTCTTCEEEEECTTC----------BCHHHHHH-HHHH
T ss_pred ChHHHHHHHHHHHHhCCCCEEEEecCCCChHHHHHHHHHHHHHcCCCCeEEEECCCC----------CCHHHHHH-HHHH
Confidence 45555555556665 688877543211100122222345554222444455443221 34443332 2334
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-cc
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~ 195 (273)
|+.++ +.++..|-... .++.+.++++.-.+. ..|=|-++...+.++++...++++|+..+-.---.+ ..
T Consensus 216 l~~~~-----i~~iEeP~~~~----d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~ 286 (381)
T 3fcp_A 216 LAAMG-----VDLIEQPVSAH----DNAALVRLSQQIETAILADEAVATAYDGYQLAQQGFTGAYALKIAKAGGPNSVLA 286 (381)
T ss_dssp HHHTT-----CSEEECCBCTT----CHHHHHHHHHHSSSEEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSTTHHHH
T ss_pred HhhcC-----ccceeCCCCcc----cHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHH
Confidence 55555 44555554322 366777777764442 334466888899999988888999997765432111 67
Q ss_pred HHHHHHHhCCeEEecccCCC
Q 024050 196 IIPLCRELGIGIVPYSPLGR 215 (273)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~ 215 (273)
+...|+++|+.++..+.+..
T Consensus 287 ia~~A~~~gi~~~~~~~~es 306 (381)
T 3fcp_A 287 LARVAQAAGIGLYGGTMLEG 306 (381)
T ss_dssp HHHHHHHHTCEEEECCSCCC
T ss_pred HHHHHHHcCCceecCCCCcc
Confidence 88999999999987766543
No 101
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=80.48 E-value=15 Score=32.52 Aligned_cols=87 Identities=10% Similarity=0.022 Sum_probs=62.3
Q ss_pred ccEEEecCCCCCCCHHHHHHHHHHHHHc-----CCc-cEEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-ccHHH
Q 024050 126 IDLYYQHRVDTSVPIEETIGEMKKLVEE-----GKI-KYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEIIP 198 (273)
Q Consensus 126 iDl~~lh~~~~~~~~~~~~~~L~~l~~~-----G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l~~ 198 (273)
+++ ++..|-......+-++.+.+|.++ -.| -..|=|.++.+.+.++++....+++|+..+-.---.+ ..+..
T Consensus 268 ~~l-~iEqP~~~~~~~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~ik~~~~GGitea~~i~~ 346 (413)
T 1kko_A 268 LPL-YIEGPVDAGNKPDQIRMLTAITKELTRLGSGVKIVADEWCNTYQDIVDFTDAGSCHMVQIKTPDLGGIHNIVDAVL 346 (413)
T ss_dssp SCE-EEECCCCCSSHHHHHHHHHHHHHHHHHHTCCCEEEECTTCCSHHHHHHHHHTTCCSEEEECGGGGSSTHHHHHHHH
T ss_pred cce-EEECCcCCCCCcccHHHHHHHHHhcccCCCCCcEEcCCCCCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHH
Confidence 565 777775433235678888888776 333 2334456788999999988888999998776543212 67999
Q ss_pred HHHHhCCeEEecccC
Q 024050 199 LCRELGIGIVPYSPL 213 (273)
Q Consensus 199 ~~~~~gi~v~a~spl 213 (273)
.|+++|+.++..+..
T Consensus 347 ~A~~~gi~~~~~~~~ 361 (413)
T 1kko_A 347 YCNKHGMEAYQGGTC 361 (413)
T ss_dssp HHHHHTCEEEECCCT
T ss_pred HHHHcCCeEEecCCC
Confidence 999999999998764
No 102
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=79.94 E-value=9 Score=33.67 Aligned_cols=145 Identities=12% Similarity=0.074 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHCCCCcccc--ccCCCCC----cHH---HHHHHHHhc--CCCCCEEEEeccCcCCCCCccccccCCHHH
Q 024050 41 EDGISMIKHAFSKGITFFDT--ADVYGQN----ANE---VLLGKALKQ--LPREKIQVATKFGIAGIGVAGVIVKGAPDY 109 (273)
Q Consensus 41 ~~~~~~l~~A~~~Gin~~Dt--A~~Yg~g----~se---~~lg~~l~~--~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~ 109 (273)
++..+....+.+.|++.|-. +..|+.- +.+ +.+ +++++ .+.-.+.| -.. . .++.+.
T Consensus 150 e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~~~~~~~~~e~v-~avR~~~g~d~~l~v--Dan--~--------~~~~~~ 216 (392)
T 3p3b_A 150 ALMQEEAMQGYAKGQRHFKIKVGRGGRHMPLWEGTKRDIAIV-RGISEVAGPAGKIMI--DAN--N--------AYNLNL 216 (392)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCHHHHTSCHHHHHHHHHHHH-HHHHHHHCTTCCEEE--ECT--T--------CCCHHH
T ss_pred HHHHHHHHHHHHhCCCEEEECcCcCcccCCccccHHHHHHHH-HHHHHHhCCCCeEEE--ECC--C--------CCCHHH
Confidence 66777778888999887653 2222110 011 222 23333 23333333 221 1 234444
Q ss_pred HHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHc-----CCccEEecCCCCHHHHHHHhhcCCceEEeee
Q 024050 110 VRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEE-----GKIKYIGLSEASPGTIRRAHAVHPITAVQME 184 (273)
Q Consensus 110 i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~-----G~ir~iGvS~~~~~~l~~~~~~~~~~~~q~~ 184 (273)
..+- +++|. ..++.++..|-. +.++.+.++++. -.|-=.+---++++.++++++....+++|+.
T Consensus 217 ai~~----~~~l~--~~~i~~iE~P~~-----~d~~~~~~l~~~l~~~g~~iPIa~dE~~~~~~~~~~i~~~~~d~v~ik 285 (392)
T 3p3b_A 217 TKEV----LAALS--DVNLYWLEEAFH-----EDEALYEDLKEWLGQRGQNVLIADGEGLASPHLIEWATRGRVDVLQYD 285 (392)
T ss_dssp HHHH----HHHTT--TSCEEEEECSSS-----CCHHHHHHHHHHHHHHTCCCEEEECCSSCCTTHHHHHHTTSCCEECCB
T ss_pred HHHH----HHHHH--hcCCCEEecCCc-----ccHHHHHHHHHhhccCCCCccEEecCCCCHHHHHHHHHcCCCCEEEeC
Confidence 3333 33332 245666777644 345666667665 3343222224567788899988888999998
Q ss_pred ccccccccc-ccHHHHHHHhCCeEEec
Q 024050 185 WSLWTRDIE-EEIIPLCRELGIGIVPY 210 (273)
Q Consensus 185 ~~l~~~~~~-~~l~~~~~~~gi~v~a~ 210 (273)
.+-. --.+ ..+...|+++|+.++..
T Consensus 286 ~~~~-Git~~~~i~~~A~~~gi~~~~h 311 (392)
T 3p3b_A 286 IIWP-GFTHWMELGEKLDAHGLRSAPH 311 (392)
T ss_dssp TTTB-CHHHHHHHHHHHHHTTCEECCB
T ss_pred cccc-CHHHHHHHHHHHHHcCCEEEec
Confidence 7775 3222 67899999999999886
No 103
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=79.16 E-value=28 Score=30.79 Aligned_cols=155 Identities=8% Similarity=0.001 Sum_probs=93.0
Q ss_pred CHHHHHHHHHHHHHCCCCcccccc-------CCCC---------------C----------cHHHHHHHHHhcCCCCCEE
Q 024050 39 SEEDGISMIKHAFSKGITFFDTAD-------VYGQ---------------N----------ANEVLLGKALKQLPREKIQ 86 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~-------~Yg~---------------g----------~se~~lg~~l~~~~r~~~~ 86 (273)
+.++..+.++.+++.|++.|-.-- .||. + .....+=+++++.-..++-
T Consensus 143 ~~e~~~~~a~~~~~~Gf~~~K~k~G~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~~v~avR~a~G~d~~ 222 (418)
T 3r4e_A 143 DIAETVEAVGHYIDMGYKAIRAQTGVPGIKDAYGVGRGKLYYEPADASLPSVTGWDTRKALNYVPKLFEELRKTYGFDHH 222 (418)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEEECCTTC------------------CCCCEEEECHHHHHHHHHHHHHHHHHHHCSSSE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHcCCCCe
Confidence 678889999999999998775421 1221 1 0111122345441123444
Q ss_pred EEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccE-EecCCCC
Q 024050 87 VATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY-IGLSEAS 165 (273)
Q Consensus 87 i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~-iGvS~~~ 165 (273)
|...... .++.+...+ +-+.|+.+++++| +.|-... .++.+.++++.-.|-= .|=+-++
T Consensus 223 l~vDaN~----------~~~~~~A~~-~~~~L~~~~i~~i-----EqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~ 282 (418)
T 3r4e_A 223 LLHDGHH----------RYTPQEAAN-LGKMLEPYQLFWL-----EDCTPAE----NQEAFRLVRQHTVTPLAVGEIFNT 282 (418)
T ss_dssp EEEECTT----------CSCHHHHHH-HHHHHGGGCCSEE-----ESCSCCS----SGGGGHHHHHHCCSCEEECTTCCS
T ss_pred EEEeCCC----------CCCHHHHHH-HHHHHHhhCCCEE-----ECCCCcc----CHHHHHHHHhcCCCCEEEcCCcCC
Confidence 4444321 234544433 3345666665544 4554322 3456777777655542 2334578
Q ss_pred HHHHHHHhhcCCceEEeeeccccccccc-ccHHHHHHHhCCeEEecccC
Q 024050 166 PGTIRRAHAVHPITAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSPL 213 (273)
Q Consensus 166 ~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l~~~~~~~gi~v~a~spl 213 (273)
.+.++++++....+++|+..+-.---.+ ..+...|+++|+.++..+++
T Consensus 283 ~~~~~~~l~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 331 (418)
T 3r4e_A 283 IWDAKDLIQNQLIDYIRATVVGAGGLTHLRRIADLASLYQVRTGCHGPT 331 (418)
T ss_dssp GGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCEEEECCCT
T ss_pred HHHHHHHHHcCCCCeEecCccccCCHHHHHHHHHHHHHcCCEEeecCCC
Confidence 8889999998888999998776542111 67899999999999988875
No 104
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=78.90 E-value=22 Score=30.69 Aligned_cols=158 Identities=8% Similarity=0.031 Sum_probs=92.1
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.++..+..+.+.+.|++.|=.--....-..+...-+++++.-.+++.|..=... .++.+...+-+ +.|
T Consensus 143 ~~~~~~~~~~~~~~~g~~~~K~Kvg~~~~~~d~~~v~avr~~~g~~~~l~vDaN~----------~~~~~~A~~~~-~~l 211 (370)
T 2chr_A 143 TKRDLDSAVEMIERRRHNRFKVKLGFRSPQDDLIHMEALSNSLGSKAYLRVDVNQ----------AWDEQVASVYI-PEL 211 (370)
T ss_dssp HHHHHHHHHHHHHTTSCCEEEEECSSSCHHHHHHHHHHHHHHTTTTSEEEEECTT----------CCCTHHHHHHH-HHH
T ss_pred hhhhHHHHHHHHhhcccceeecccccCChHHHHHHHHHHHHhcCCCcEEEecCCC----------CCCHHHHHHHH-HHH
Confidence 4666777777888888886644322211111111223444322233333332211 13344333222 233
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-ccH
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l 196 (273)
+. .++.++..|-...+ ++.+.+|+++-.|. +.|=|.++...+.++++...++++|+.....---.+ ..+
T Consensus 212 ~~-----~~~~~iEeP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~i~~d~~~~GGit~~~~i 282 (370)
T 2chr_A 212 EA-----LGVELIEQPVGREN----TQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVFSLKLCNMGGVSATQKI 282 (370)
T ss_dssp HT-----TTCCEEECCSCSSC----HHHHHHHHHHCSSEEEESSSCCSHHHHHHHHTTTCCSEECCCHHHHTSHHHHHHH
T ss_pred Hh-----cCCceecCCCChhh----hhhhhHHhhhccCCccCCccCCCHHHHHHHHHcCCCcEEEeCCcccCCHHHHHHH
Confidence 33 45667777754433 56778888776654 344466888999999988888999987665432111 678
Q ss_pred HHHHHHhCCeEEecccCCCc
Q 024050 197 IPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 197 ~~~~~~~gi~v~a~spl~~G 216 (273)
...|+++||.++..+.+..+
T Consensus 283 a~~A~~~gi~~~~~~~~~~~ 302 (370)
T 2chr_A 283 AAVAEASGIASYGGTMLDST 302 (370)
T ss_dssp HHHHHHHTCEECCCCCSCCH
T ss_pred HHHHHHcCCeEEeCCCcccH
Confidence 89999999999877766544
No 105
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=78.25 E-value=35 Score=30.48 Aligned_cols=151 Identities=9% Similarity=0.034 Sum_probs=90.4
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.++..+..+.+++.|++.|-.--.-......+.+ +++++.-..++-|...... .++.+...+- -+.|
T Consensus 201 ~~e~~~~~a~~~~~~Gf~~~KlKvG~~~~~d~~~v-~avR~a~G~~~~l~vDaN~----------~~~~~~A~~~-~~~L 268 (441)
T 4a35_A 201 SDDTLKQLCAQALKDGWTRFKVKVGADLQDDMRRC-QIIRDMIGPEKTLMMDANQ----------RWDVPEAVEW-MSKL 268 (441)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSSCHHHHHHHH-HHHHHHHCTTSEEEEECTT----------CCCHHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCCCHHHHHHHH-HHHHHHhCCCCeEEEECCC----------CCCHHHHHHH-HHhh
Confidence 68889999999999999988643211111122222 3454411234444444321 1344433222 2233
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHH----cCCccEEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVE----EGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE- 193 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~----~G~ir~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~- 193 (273)
+. .+++++..|-...+ ++.+.++++ .+.=-..|=+.++...+.++++...++++|+..+-.---.+
T Consensus 269 ~~-----~~~~~iEeP~~~~d----~~~~~~l~~~l~~~~iPIa~gE~~~~~~~~~~~l~~~a~div~~d~~~~GGit~~ 339 (441)
T 4a35_A 269 AK-----FKPLWIEEPTSPDD----ILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQAKALQFLQIDSCRLGSVNEN 339 (441)
T ss_dssp GG-----GCCSEEECCSCTTC----HHHHHHHHHHHGGGTCEEEECTTCCSHHHHHHHHHTTCCSEECCCTTTSSHHHHH
T ss_pred cc-----cCccEEeCCCCccc----HHHHHHHHHhccCCCCCEEeCCccccHHHHHHHHHcCCCCEEEECccccCCHHHH
Confidence 33 45667777755333 445555555 34434556677899999999998889999997776542111
Q ss_pred ccHHHHHHHhCCeEEec
Q 024050 194 EEIIPLCRELGIGIVPY 210 (273)
Q Consensus 194 ~~l~~~~~~~gi~v~a~ 210 (273)
..+...|+++|+.+...
T Consensus 340 ~kia~lA~~~gv~v~~H 356 (441)
T 4a35_A 340 LSVLLMAKKFEIPVCPH 356 (441)
T ss_dssp HHHHHHHHHTTCCBCCC
T ss_pred HHHHHHHHHcCCEEEEe
Confidence 67899999999998654
No 106
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=78.09 E-value=34 Score=30.44 Aligned_cols=154 Identities=8% Similarity=0.022 Sum_probs=94.0
Q ss_pred CHHHHHHHHHHHHHCCCCcccccc--C----CCCCcH------HHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCC
Q 024050 39 SEEDGISMIKHAFSKGITFFDTAD--V----YGQNAN------EVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGA 106 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~--~----Yg~g~s------e~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~ 106 (273)
+.++..+..+.+++.|++.|-.-- . +|.... ...+=+++++.-.+++-|...... .++
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~~G~~~~~~~~~~d~e~v~avR~avG~d~~L~vDan~----------~~t 215 (433)
T 3rcy_A 146 SADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHG----------QFT 215 (433)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCS----------CBC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCcccccCCCcchhhHHHHHHHHHHHHHHhCCCCeEEEeCCC----------CCC
Confidence 678899999999999999877521 1 121110 111223444421234445555321 234
Q ss_pred HHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeec
Q 024050 107 PDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEW 185 (273)
Q Consensus 107 ~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~ 185 (273)
.+...+ +-+.|+.+++++ ++.|-.. +.++.+.++++.-.|- ..|=+-++.+.++++++....+++|+..
T Consensus 216 ~~~A~~-~~~~Le~~~i~~-----iEeP~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~g~~D~v~~d~ 285 (433)
T 3rcy_A 216 TAGAIR-LGQAIEPYSPLW-----YEEPVPP----DNVGAMAQVARAVRIPVATGERLTTKAEFAPVLREGAAAILQPAL 285 (433)
T ss_dssp HHHHHH-HHHHHGGGCCSE-----EECCSCT----TCHHHHHHHHHHSSSCEEECTTCCSHHHHHHHHHTTCCSEECCCH
T ss_pred HHHHHH-HHHHhhhcCCCE-----EECCCCh----hhHHHHHHHHhccCCCEEecCCCCCHHHHHHHHHcCCCCEEEeCc
Confidence 444333 334566666544 4555432 2467777888765554 3344557889999999988889999877
Q ss_pred cccccccc-ccHHHHHHHhCCeEEeccc
Q 024050 186 SLWTRDIE-EEIIPLCRELGIGIVPYSP 212 (273)
Q Consensus 186 ~l~~~~~~-~~l~~~~~~~gi~v~a~sp 212 (273)
+-.---.+ ..+...|+.+|+.+...++
T Consensus 286 ~~~GGit~~~kia~lA~~~gv~~~~h~~ 313 (433)
T 3rcy_A 286 GRAGGIWEMKKVAAMAEVYNAQMAPHLY 313 (433)
T ss_dssp HHHTHHHHHHHHHHHHHTTTCEECCCCS
T ss_pred hhcCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 65432111 6789999999999987763
No 107
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=77.08 E-value=16 Score=32.13 Aligned_cols=152 Identities=13% Similarity=0.112 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHH
Q 024050 40 EEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLK 119 (273)
Q Consensus 40 ~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~ 119 (273)
.++..+..+.+.+.|++.|..--..+. ..+...=+++++.-.+++-|...... .++.+...+ +-+.|+
T Consensus 156 ~e~~~~~a~~~~~~G~~~iKlK~g~~~-~~d~~~v~avR~a~g~~~~l~vDaN~----------~~~~~~A~~-~~~~L~ 223 (392)
T 3ddm_A 156 PENPEDVVARKAAEGYRAFKLKVGFDD-ARDVRNALHVRELLGAATPLMADANQ----------GWDLPRARQ-MAQRLG 223 (392)
T ss_dssp SSSHHHHHHHHHHHTCCCEEEECSSCH-HHHHHHHHHHHHHHCSSSCEEEECTT----------CCCHHHHHH-HHHHHG
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCCH-HHHHHHHHHHHHhcCCCceEEEeCCC----------CCCHHHHHH-HHHHHH
Confidence 456777788888999998875432211 12222334555411123333333221 134444333 334566
Q ss_pred HcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-ccHH
Q 024050 120 RLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEII 197 (273)
Q Consensus 120 ~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l~ 197 (273)
.+++++| ..|-...+ .++.+.++++.-.|- ..|=+-++.+.++++++....+++|+..+-.---.+ ..+.
T Consensus 224 ~~~i~~i-----EeP~~~~d---~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia 295 (392)
T 3ddm_A 224 PAQLDWL-----EEPLRADR---PAAEWAELAQAAPMPLAGGENIAGVAAFETALAARSLRVMQPDLAKWGGFSGCLPVA 295 (392)
T ss_dssp GGCCSEE-----ECCSCTTS---CHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCEEEECCCTTTTTHHHHHHHHH
T ss_pred HhCCCEE-----ECCCCccc---hHHHHHHHHHhcCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCcchhCCHHHHHHHH
Confidence 6665554 44533221 267777887765543 334456788999999988889999987765432111 6799
Q ss_pred HHHHHhCCeEEecc
Q 024050 198 PLCRELGIGIVPYS 211 (273)
Q Consensus 198 ~~~~~~gi~v~a~s 211 (273)
..|+++|+.++...
T Consensus 296 ~~A~~~gi~~~~h~ 309 (392)
T 3ddm_A 296 RAVVAAGLRYCPHY 309 (392)
T ss_dssp HHHHHTTCEECCEE
T ss_pred HHHHHcCCEEEecC
Confidence 99999999997543
No 108
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=75.96 E-value=39 Score=29.40 Aligned_cols=145 Identities=17% Similarity=0.044 Sum_probs=90.0
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCc---HHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNA---NEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCE 115 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~---se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~ 115 (273)
+.++..+....+.+.|++.|..-- |.+. ..+.+ +++++.-.+++-|...... .++.+...+-++
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~vKik~--g~~~~~~~~e~v-~avR~a~G~~~~l~vDan~----------~~~~~~a~~~~~ 211 (389)
T 2oz8_A 145 DDDAFVSLFSHAASIGYSAFKIKV--GHRDFDRDLRRL-ELLKTCVPAGSKVMIDPNE----------AWTSKEALTKLV 211 (389)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEC--CCSSHHHHHHHH-HHHHTTSCTTCEEEEECTT----------CBCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCEEEEcc--CCCCHHHHHHHH-HHHHHhhCCCCeEEEECCC----------CCCHHHHHHHHH
Confidence 678888888889999999887432 2111 22333 3455422235555544321 134565555554
Q ss_pred HHHHH--cCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcC-CccEEec-CCCCHHHHHHHhhcCCceEEeeeccccccc
Q 024050 116 ASLKR--LDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEG-KIKYIGL-SEASPGTIRRAHAVHPITAVQMEWSLWTRD 191 (273)
Q Consensus 116 ~sL~~--L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G-~ir~iGv-S~~~~~~l~~~~~~~~~~~~q~~~~l~~~~ 191 (273)
. |+. ++++ ++..|-.. +.++.+.++++.- .|-=++- +- +++.++++++....+++|+. .=+..
T Consensus 212 ~-l~~~g~~i~-----~iEqP~~~----~~~~~~~~l~~~~~~iPIa~dE~~-~~~~~~~~i~~~~~d~v~ik-GGit~- 278 (389)
T 2oz8_A 212 A-IREAGHDLL-----WVEDPILR----HDHDGLRTLRHAVTWTQINSGEYL-DLQGKRLLLEAHAADILNVH-GQVTD- 278 (389)
T ss_dssp H-HHHTTCCCS-----EEESCBCT----TCHHHHHHHHHHCCSSEEEECTTC-CHHHHHHHHHTTCCSEEEEC-SCHHH-
T ss_pred H-HHhcCCCce-----EEeCCCCC----cCHHHHHHHHhhCCCCCEEeCCCC-CHHHHHHHHHcCCCCEEEEC-cCHHH-
Confidence 4 777 5543 45555332 2467778888765 5543333 44 88889999988888999987 11111
Q ss_pred ccccHHHHHHHhCCeEEec
Q 024050 192 IEEEIIPLCRELGIGIVPY 210 (273)
Q Consensus 192 ~~~~l~~~~~~~gi~v~a~ 210 (273)
-..+...|+++|+.++..
T Consensus 279 -a~~i~~~A~~~gi~~~~~ 296 (389)
T 2oz8_A 279 -VMRIGWLAAELGIPISIG 296 (389)
T ss_dssp -HHHHHHHHHHHTCCEEEC
T ss_pred -HHHHHHHHHHcCCeEeec
Confidence 167899999999999988
No 109
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=75.72 E-value=43 Score=29.68 Aligned_cols=155 Identities=10% Similarity=0.002 Sum_probs=92.7
Q ss_pred CHHHHHHHHHHHHHCCCCcccc--cc-----CCC---------------CC----------cHHHHHHHHHhcCCCCCEE
Q 024050 39 SEEDGISMIKHAFSKGITFFDT--AD-----VYG---------------QN----------ANEVLLGKALKQLPREKIQ 86 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dt--A~-----~Yg---------------~g----------~se~~lg~~l~~~~r~~~~ 86 (273)
+.++..+.++.+++.|++.|=. .. .|| ++ .....+=+++++.-..++-
T Consensus 149 ~~e~~~~~a~~~~~~Gf~~iKlKvG~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v~avR~avG~d~~ 228 (424)
T 3v3w_A 149 DLDSTLEAVRKAKDKGYKAIRVQCGIPGIAKTYGVSTNTKSYEPADADLPSVEVWSTEKYLNYIPDVFAAVRKEFGPDIH 228 (424)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCC-----CCSCCBSSCCEEEECHHHHHHHHHHHHHHHHHHHCSSSE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHcCCCCc
Confidence 6788889999999999986532 10 121 11 0111222345541123444
Q ss_pred EEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCC
Q 024050 87 VATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEAS 165 (273)
Q Consensus 87 i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~ 165 (273)
|...... .++.+...+ +-+.|+.++++++ +.|-... .++.+.++++.-.|- ..|=+-++
T Consensus 229 l~vDaN~----------~~~~~~A~~-~~~~L~~~~i~~i-----EqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~ 288 (424)
T 3v3w_A 229 LLHDVHH----------RLTPIEAAR-LGKALEPYHLFWM-----EDAVPAE----NQESFKLIRQHTTTPLAVGEVFNS 288 (424)
T ss_dssp EEEECTT----------CCCHHHHHH-HHHHHGGGCCSEE-----ECCSCCS----STTHHHHHHHHCCSCEEECTTCCS
T ss_pred EEEeCCC----------CCCHHHHHH-HHHHHHhcCCCEE-----ECCCChH----hHHHHHHHHhhCCCCEEEccCcCC
Confidence 4444321 234544433 3345666665544 4554322 345677777765554 23334578
Q ss_pred HHHHHHHhhcCCceEEeeeccccccccc-ccHHHHHHHhCCeEEecccC
Q 024050 166 PGTIRRAHAVHPITAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSPL 213 (273)
Q Consensus 166 ~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l~~~~~~~gi~v~a~spl 213 (273)
++.++++++....+++|+..+-.---.+ ..+...|+++|+.++..+++
T Consensus 289 ~~~~~~~i~~ga~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 337 (424)
T 3v3w_A 289 IHDCRELIQNQWIDYIRTTIVHAGGISQMRRIADFASLFHVRTGFHGAT 337 (424)
T ss_dssp GGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEEEECCCT
T ss_pred HHHHHHHHHcCCCCeEeecchhcCCHHHHHHHHHHHHHcCCEEEecCCC
Confidence 8889999988888999998776542111 67899999999999988875
No 110
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=75.49 E-value=22 Score=31.46 Aligned_cols=156 Identities=11% Similarity=0.093 Sum_probs=91.8
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCC-----------------cHHHHH------HHHHhcCCCCCEEEEeccCcCC
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQN-----------------ANEVLL------GKALKQLPREKIQVATKFGIAG 95 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g-----------------~se~~l------g~~l~~~~r~~~~i~tK~~~~~ 95 (273)
+.++..+.++.+++.|++.|=.--....+ .....+ =+++++.-.+++.|..-...
T Consensus 153 ~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~avR~a~G~~~~l~vDan~-- 230 (421)
T 4hnl_A 153 NLDDLYHEIDRFLAAGYRYIRCQLGFYGGNPSQLQTPEEPISGSYFDQTDYMETTLKMFAAIKEKYGNQFQMLHDVHE-- 230 (421)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEEESCCCCCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTTSSEEEEECTT--
T ss_pred CHHHHHHHHHHHHHhhHHHHhhccccccCCchhccccccccccccccchhHHHHHHHHHHHHHHHhCCCceEeccccc--
Confidence 57888889999999999876432211000 011111 12333311234444443321
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhh
Q 024050 96 IGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHA 174 (273)
Q Consensus 96 ~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~ 174 (273)
.++.+...+-+ +.|+. .+++++..|-+. +-++.+.+|+++-.|. ..|=+.++...+.++++
T Consensus 231 --------~~~~~~A~~~~-~~l~~-----~~i~~iEeP~~~----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~ 292 (421)
T 4hnl_A 231 --------RLHPNQAIQFA-KAAEP-----YQLFFLEDILPP----DQSHWLTQLRSQSATPIATGELFNNPMEWQELVK 292 (421)
T ss_dssp --------CSCHHHHHHHH-HHHGG-----GCCSEEECCSCG----GGGGGHHHHHTTCCCCEEECTTCCSGGGTHHHHH
T ss_pred --------cCCHHHHHHHH-HHhhh-----hhhcccccCCcc----cchHHHHHHHhcCCCCeecCcceehhHHHHHHHh
Confidence 13444443322 23444 455666666432 3466777887765543 34556688888999999
Q ss_pred cCCceEEeeeccccccccc-ccHHHHHHHhCCeEEecccCC
Q 024050 175 VHPITAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSPLG 214 (273)
Q Consensus 175 ~~~~~~~q~~~~l~~~~~~-~~l~~~~~~~gi~v~a~spl~ 214 (273)
....+++|+..+-.---.+ ..+...|+++|+.+...++..
T Consensus 293 ~~a~d~v~~d~~~~GGite~~~ia~~A~~~gi~v~~h~~~~ 333 (421)
T 4hnl_A 293 NRQIDFMRAHVSQIGGITPALKLAHFCDAMGVRIAWHTPSD 333 (421)
T ss_dssp TTCCSEECCCGGGGTSHHHHHHHHHHHHHTTCEECCCCCSS
T ss_pred cCCceEEEeCCCCCCCHHHHHHHHHHHHHCCCeEEEeCCcc
Confidence 8888999987776542112 678899999999998776653
No 111
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=75.31 E-value=36 Score=29.91 Aligned_cols=153 Identities=12% Similarity=0.059 Sum_probs=91.7
Q ss_pred CHHHHHHHHHHHHHCCCCcccccc--CCC--CC--------cHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCC
Q 024050 39 SEEDGISMIKHAFSKGITFFDTAD--VYG--QN--------ANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGA 106 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~--~Yg--~g--------~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~ 106 (273)
+.++..+..+.+++.|++.|-.-. .|. .| ......=+++++.-.+++-|...... .++
T Consensus 151 ~~e~~~~~a~~~~~~G~~~~KlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~----------~~~ 220 (404)
T 4e5t_A 151 DADMAAEAAAKAVDQGFTAVKFDPAGAYTIYDGHQPSLEDLERSEAFCKQIRAAVGTKADLLFGTHG----------QFT 220 (404)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCSBCCCHHHHHHHHHHHHHHHHHHGGGSEEEECCCS----------CBC
T ss_pred CHHHHHHHHHHHHHcCCCEEeeCCCCCCcccccccccHHHHHHHHHHHHHHHHHcCCCCeEEEeCCC----------CcC
Confidence 678888888899999999887632 111 00 01111223444411234445555321 134
Q ss_pred HHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEE-ecCCCCHHHHHHHhhcCCceEEeeec
Q 024050 107 PDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPGTIRRAHAVHPITAVQMEW 185 (273)
Q Consensus 107 ~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~i-GvS~~~~~~l~~~~~~~~~~~~q~~~ 185 (273)
.+...+ +-+.|+.++++++ ..|-... .++.+.++++.-.|-=. |=+-++.+.++++++....+++|+..
T Consensus 221 ~~~A~~-~~~~l~~~~i~~i-----EeP~~~~----~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~ 290 (404)
T 4e5t_A 221 VSGAKR-LARRLEAYDPLWF-----EEPIPPE----KPEDMAEVARYTSIPVATGERLCTKYEFSRVLETGAASILQMNL 290 (404)
T ss_dssp HHHHHH-HHHHHGGGCCSEE-----ECCSCTT----CHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTCCSEECCCT
T ss_pred HHHHHH-HHHHHhhcCCcEE-----ECCCCcc----cHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEecCc
Confidence 444433 3345666665544 4553322 35677788776555422 33456788889999888889999987
Q ss_pred cccccccc-ccHHHHHHHhCCeEEecc
Q 024050 186 SLWTRDIE-EEIIPLCRELGIGIVPYS 211 (273)
Q Consensus 186 ~l~~~~~~-~~l~~~~~~~gi~v~a~s 211 (273)
+-.---.+ ..+...|+.+|+.+...+
T Consensus 291 ~~~GGit~~~~ia~~A~~~gi~~~~h~ 317 (404)
T 4e5t_A 291 GRVGGLLEAKKIAAMAECHSAQIAPHL 317 (404)
T ss_dssp TTSSCHHHHHHHHHHHHHTTCEECCCC
T ss_pred cccCCHHHHHHHHHHHHHcCCEEeecC
Confidence 76542212 678999999999987664
No 112
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=75.02 E-value=32 Score=30.01 Aligned_cols=158 Identities=9% Similarity=-0.007 Sum_probs=88.5
Q ss_pred CHHHHHHHHHHHHH-CCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFS-KGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 39 ~~~~~~~~l~~A~~-~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
+.++..+....+++ .|++.|-.--.-..-..+...=+++++.-.+++-|...... .++.+...+ +-+.
T Consensus 148 ~~~~~~~~~~~~~~~~G~~~~KiKvg~~~~~~d~~~v~avR~a~g~~~~l~vDaN~----------~~~~~~A~~-~~~~ 216 (382)
T 3dgb_A 148 DTAKDIAEAQKMLDLRRHRIFKLKIGAGEVDRDLAHVIAIKKALGDSASVRVDVNQ----------AWDEAVALR-ACRI 216 (382)
T ss_dssp CHHHHHHHHHHHHHTTSCSEEEEECCSSCHHHHHHHHHHHHHHHGGGSEEEEECTT----------CBCHHHHHH-HHHH
T ss_pred ChHHHHHHHHHHHHhCCCCEEEEeeCCCCHHHHHHHHHHHHHHcCCCCeEEEeCCC----------CCCHHHHHH-HHHH
Confidence 45555555566666 69987764321110012222223454411233444444321 134443332 2334
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-cc
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~ 195 (273)
|+.+++ .++..|-... .++.+.++++.-.|. ..|=|-++...+.++++....+++|+..+-.---.+ ..
T Consensus 217 l~~~~i-----~~iEqP~~~~----d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ 287 (382)
T 3dgb_A 217 LGGNGI-----DLIEQPISRN----NRAGMVRLNASSPAPIMADESIECVEDAFNLAREGAASVFALKIAKNGGPRATLR 287 (382)
T ss_dssp HHTTTC-----CCEECCBCTT----CHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHH
T ss_pred HhhcCc-----CeeeCCCCcc----CHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHH
Confidence 555554 4445553322 366777777764443 345566888899999988888899987765432111 67
Q ss_pred HHHHHHHhCCeEEecccCCCc
Q 024050 196 IIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~G 216 (273)
+...|+++|+.++..+.+..+
T Consensus 288 i~~~A~~~gi~~~~~~~~es~ 308 (382)
T 3dgb_A 288 TAAIAEAAGIGLYGGTMLEGG 308 (382)
T ss_dssp HHHHHHHHTCEEEECCSCCCH
T ss_pred HHHHHHHcCCeEeecCCCccH
Confidence 889999999999877666543
No 113
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=74.86 E-value=41 Score=29.07 Aligned_cols=157 Identities=8% Similarity=0.043 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHH-CCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 40 EEDGISMIKHAFS-KGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 40 ~~~~~~~l~~A~~-~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
.++..+-...+++ .|++.|-.--....-..+...=+++++.-.+++-|....... ++.+...+ +-+.|
T Consensus 143 ~~~~~~~~~~~~~~~G~~~~KiKvg~~~~~~d~~~v~avR~~~g~~~~l~vDan~~----------~~~~~a~~-~~~~l 211 (370)
T 1chr_A 143 TKRDLDSAVEMIERRRHNRFKVKLGFRSPQDDLIHMEALSNSLGSKAYLRVDVNQA----------WDEQVASV-YIPEL 211 (370)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEECSSSCSHHHHHHHHHHHHHSSTTCCEEEECTTC----------CCTTHHHH-HTHHH
T ss_pred cHHHHHHHHHHHHHCCCCEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEEECCCC----------CCHHHHHH-HHHHH
Confidence 3443333445555 899986643211111222333345665222333344343211 22322222 22344
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-ccH
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEI 196 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l 196 (273)
+.+ ++.++..|-... .++.+.++++.-.|- ..|=+-++.+.++++++....+++|+..+-.---.+ ..+
T Consensus 212 ~~~-----~i~~iEqP~~~~----~~~~~~~l~~~~~iPia~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i 282 (370)
T 1chr_A 212 EAL-----GVELIEQPVGRE----NTQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVFSLKLCNMGGVSATQKI 282 (370)
T ss_dssp HTT-----TEEEEECCSCTT----CHHHHHHHHHHSCSEEEESSSCCSHHHHHHHHTTTSCSEEEECTTTSCSHHHHHHH
T ss_pred Hhc-----CCCEEECCCCcc----cHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHH
Confidence 444 455666664432 356677777765543 233455788999999998888999998776542112 678
Q ss_pred HHHHHHhCCeEEecccCCCc
Q 024050 197 IPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 197 ~~~~~~~gi~v~a~spl~~G 216 (273)
...|+++|+.++..+.+..+
T Consensus 283 ~~~A~~~g~~~~~~~~~es~ 302 (370)
T 1chr_A 283 AAVAEASGIASYGGTMLDST 302 (370)
T ss_dssp HHHHHHHTCEEEECCSCCTT
T ss_pred HHHHHHcCCeEEecCCCccH
Confidence 99999999999987666544
No 114
>1vpq_A Hypothetical protein TM1631; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.1.32.1
Probab=74.48 E-value=27 Score=29.05 Aligned_cols=136 Identities=16% Similarity=0.123 Sum_probs=76.9
Q ss_pred HHHHHHHHC-CCCcccc-ccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHc-
Q 024050 45 SMIKHAFSK-GITFFDT-ADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRL- 121 (273)
Q Consensus 45 ~~l~~A~~~-Gin~~Dt-A~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L- 121 (273)
+-|+.+.++ -+|.+.. +..|..- +++.+.+|.++ -.+++..+-|.......... ......+...+.+-++++-|
T Consensus 39 ~~L~~Ya~~~~F~tVEiNsTFY~~p-~~~t~~~W~~~-tP~~F~F~vKa~r~iTh~~~-~~~~~~~~~~~~F~~~~~pL~ 115 (273)
T 1vpq_A 39 QFLKYYWAVLGFRIVELNFTYYTQP-SWRSFVQMLRK-TPPDFYFTVKTPGSVTHVLW-KEGKDPKEDMENFTRQIEPLI 115 (273)
T ss_dssp GHHHHHHHTSCCCEEEECCCSSSSS-CHHHHHHHHTT-SCTTCEEEEECCHHHHHTHH-HHTCCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCeEEECccccCCC-CHHHHHHHHHh-CCCCeEEEEEeChhhccccc-ccccchHHHHHHHHHHHHhhc
Confidence 455555542 3565544 4478753 67788889884 45789999998643310000 00011122233444567777
Q ss_pred -CCCcccEEEecCCCCCCCHHHHHHHHHHHHHc-CCccEEecCCCCHHHHHHHhhcCCceEEeeecccccccccccHHHH
Q 024050 122 -DVDYIDLYYQHRVDTSVPIEETIGEMKKLVEE-GKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPL 199 (273)
Q Consensus 122 -~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~-G~ir~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~~~l~~~ 199 (273)
+ +++..+++.-|..-....+.++.|..+.+. |. ...+.+.-.-+.. .+++++
T Consensus 116 ~~-~kLG~vL~Q~Ppsf~~~~~~~~~L~~l~~~l~~----------------------~~AvE~Rh~sW~~---~~~~~l 169 (273)
T 1vpq_A 116 EE-QRLKMTLAQFPFSFKFSRKNVEYLEKLRESYPY----------------------ELAVEFRHYSWDR---EETYEF 169 (273)
T ss_dssp HT-TCEEEEEEECCTTCCCCHHHHHHHHHHHHHCCS----------------------CEEEECCBGGGCS---HHHHHH
T ss_pred cC-CCEEEEEEEcCCCCCCCHHHHHHHHHHHHHcCC----------------------CEEEEccCchhcc---HHHHHH
Confidence 6 788888888887655444555556665433 21 2233332221211 468889
Q ss_pred HHHhCCeEEe
Q 024050 200 CRELGIGIVP 209 (273)
Q Consensus 200 ~~~~gi~v~a 209 (273)
++++|+..+.
T Consensus 170 L~~~~v~~V~ 179 (273)
T 1vpq_A 170 LRNHGITFVV 179 (273)
T ss_dssp HHHHTCEEEE
T ss_pred HHHcCcEEEE
Confidence 9999988774
No 115
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=74.15 E-value=45 Score=29.22 Aligned_cols=155 Identities=12% Similarity=0.148 Sum_probs=93.2
Q ss_pred CHHHHHHHHHHHHHCCCCcccccc-CCC-------------CC---------cHHHHHHHHHhcCCCCCEEEEeccCcCC
Q 024050 39 SEEDGISMIKHAFSKGITFFDTAD-VYG-------------QN---------ANEVLLGKALKQLPREKIQVATKFGIAG 95 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~-~Yg-------------~g---------~se~~lg~~l~~~~r~~~~i~tK~~~~~ 95 (273)
+.++..+.++.+++.|++.|-.-- .++ +| +....+=+++++.-.+++-|......
T Consensus 133 ~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~-- 210 (401)
T 3sbf_A 133 TMEGIYDLVEGFLEKGYKHIRCQLGFYGGVPTDLHTTQNPTEGSYYDQDQYMDNTLTMFKSLREKYGNQFHILHDVHE-- 210 (401)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEESCCCSCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTTSSEEEEECTT--
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchHHHHHHHHHHHHHHHHcCCCCEEEEECCC--
Confidence 678889999999999999776421 111 01 01112223454411234445544321
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhh
Q 024050 96 IGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHA 174 (273)
Q Consensus 96 ~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~ 174 (273)
.++.+...+ +-+.|+.++++++ ..|-.. +.++.+.++++.-.|- ..|=+-++.+.++++++
T Consensus 211 --------~~~~~~A~~-~~~~L~~~~i~~i-----EqP~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~ 272 (401)
T 3sbf_A 211 --------RLFPNQAIQ-FAKEVEQYKPYFI-----EDILPP----NQTEWLDNIRSQSSVSLGLGELFNNPEEWKSLIA 272 (401)
T ss_dssp --------CSCHHHHHH-HHHHHGGGCCSCE-----ECSSCT----TCGGGHHHHHTTCCCCEEECTTCCSHHHHHHHHH
T ss_pred --------CCCHHHHHH-HHHHHHhcCCCEE-----ECCCCh----hHHHHHHHHHhhCCCCEEeCCccCCHHHHHHHHh
Confidence 134444333 2345666665554 445332 2355677777765543 23335578899999999
Q ss_pred cCCceEEeeeccccccccc-ccHHHHHHHhCCeEEecccC
Q 024050 175 VHPITAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSPL 213 (273)
Q Consensus 175 ~~~~~~~q~~~~l~~~~~~-~~l~~~~~~~gi~v~a~spl 213 (273)
....+++|+..+-.---.+ ..+...|+.+|+.+...++.
T Consensus 273 ~~~~d~v~~k~~~~GGit~~~kia~~A~~~gi~~~~h~~~ 312 (401)
T 3sbf_A 273 NRRIDFIRCHVSQIGGITPALKLGHLCQNFGVRIAWHCAP 312 (401)
T ss_dssp TTCCSEECCCGGGGTSHHHHHHHHHHHHHHTCEECCCCCT
T ss_pred cCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEEecCCc
Confidence 8889999998776542111 67899999999999887763
No 116
>4g8t_A Glucarate dehydratase; enolase, enzyme function INI EFI, structural genomics, lyase; 1.70A {Actinobacillus succinogenes} PDB: 1ec7_A 1ec8_A* 1ec9_A* 1ecq_A* 1jdf_A* 3pwi_A* 1jct_A* 3pwg_A* 1bqg_A
Probab=74.04 E-value=17 Score=32.81 Aligned_cols=157 Identities=14% Similarity=0.123 Sum_probs=87.5
Q ss_pred CHHHHHHHHHHHHH-CCCCccccccCCCCCcHHHHHHHHHhc-CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFS-KGITFFDTADVYGQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEA 116 (273)
Q Consensus 39 ~~~~~~~~l~~A~~-~Gin~~DtA~~Yg~g~se~~lg~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~ 116 (273)
+.++..+....+++ .|++.|=.--....+..+...-+++++ .+.-++.|=.- . .++.+... +
T Consensus 202 ~~~~~~~~~~~~~~~~Gf~~~KlKvG~~~~~~di~~v~avrea~pd~~L~vDaN----~--------~wt~~~Ai----~ 265 (464)
T 4g8t_A 202 TPESVVRLAEAAYEKYGFNDFKLKGGVLDGFEEAEAVTALAKRFPDARITLDPN----G--------AWSLDEAV----K 265 (464)
T ss_dssp SHHHHHHHHHHHHHHHCCSCEEEECSSSCHHHHHHHHHHHHHHSTTCCEEEECT----T--------CBCHHHHH----H
T ss_pred CHHHHHHHHHHHHHHcCCCeEEEeCCCCCHHHHHHHHHHHHhhCCCceEEEECC----C--------ccCHHHHH----H
Confidence 45566666666654 498865332111111222222345554 44223322211 1 13443332 3
Q ss_pred HHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCc-cEEecCCCCHHHHHHHhhcCCceEEeeeccccccccccc
Q 024050 117 SLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIEEE 195 (273)
Q Consensus 117 sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~~~ 195 (273)
..+.|. ++ +.++..|-...+.....+.+.++++.-.| -+.|=+.++...+.++++...++++|.....---..-..
T Consensus 266 ~~~~le-~~--l~wiEeP~~~~d~~~~~e~~a~lr~~~~iPIa~gE~~~~~~~~~~~i~~~avdi~~~d~~~GGit~~~k 342 (464)
T 4g8t_A 266 IGKQLK-GV--LAYAEDPCGAEQGYSGREIMAEFRRATGLPTATNMIATDWRQMGHTISLQSVDIPLADPHFWTMQGSIR 342 (464)
T ss_dssp HHHHTT-TT--CSCEESCBCCBTTBCHHHHHHHHHHHHCCCEEESSSSCSHHHHHHHHHHTCCSEEBCCHHHHCHHHHHH
T ss_pred HHHHhh-hc--cceeecCcCcccccchHHHHHhhhccCCCCccccccccchhhHHHHHHhhCCCEEeccccccchHHHHH
Confidence 445554 33 44566665444444456667777765444 466778899999999998887888887633211111167
Q ss_pred HHHHHHHhCCeEEecccCC
Q 024050 196 IIPLCRELGIGIVPYSPLG 214 (273)
Q Consensus 196 l~~~~~~~gi~v~a~spl~ 214 (273)
+...|+.+|+.+...+-..
T Consensus 343 ia~lA~~~gi~v~~h~~~~ 361 (464)
T 4g8t_A 343 VAQMCHEWGLTWGSHSNNH 361 (464)
T ss_dssp HHHHHHHHTCCCBCCCCSC
T ss_pred HHHHHHHcCCEEEEcCCcc
Confidence 8899999999998775443
No 117
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=73.13 E-value=43 Score=29.66 Aligned_cols=154 Identities=8% Similarity=0.008 Sum_probs=92.0
Q ss_pred CHHHHHHHHHHHHHCCCCcccc--c-----cCCC---------------CC-----------cHHHHHHHHHhcCCCCCE
Q 024050 39 SEEDGISMIKHAFSKGITFFDT--A-----DVYG---------------QN-----------ANEVLLGKALKQLPREKI 85 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dt--A-----~~Yg---------------~g-----------~se~~lg~~l~~~~r~~~ 85 (273)
+.++..+.++.+++.|++.|=. . ..|| ++ ...+.+ +++++.-.+++
T Consensus 150 ~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v-~avR~a~G~d~ 228 (425)
T 3vcn_A 150 TIEDTIAEAVKYKAMGYKAIRLQTGVPGLASTYGVSKDKMFYEPADNDLPTENIWSTAKYLNSVPKLF-ERAREVLGWDV 228 (425)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCSSCSSCCCCCCBSSCCEEEECHHHHHTTTHHHH-HHHHHHHCSSS
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeecCccccccccccccccccCcccccccccccccchhHHHHHHHHH-HHHHHHcCCCC
Confidence 6788889999999999986532 1 1122 11 112222 34554112244
Q ss_pred EEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccE-EecCCC
Q 024050 86 QVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY-IGLSEA 164 (273)
Q Consensus 86 ~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~-iGvS~~ 164 (273)
-|...... .++.+...+ +-+.|+.++++++ +.|-... .++.+.++++.-.|-= .|=+-+
T Consensus 229 ~l~vDaN~----------~~~~~~A~~-~~~~L~~~~i~~i-----EqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~ 288 (425)
T 3vcn_A 229 HLLHDVHH----------RLTPIEAAR-LGKDLEPYRLFWL-----EDSVPAE----NQAGFRLIRQHTTTPLAVGEIFA 288 (425)
T ss_dssp EEEEECTT----------CCCHHHHHH-HHHHHGGGCCSEE-----ECCSCCS----STTHHHHHHHHCCSCEEECTTCC
T ss_pred EEEEECCC----------CCCHHHHHH-HHHHHHhcCCCEE-----ECCCChh----hHHHHHHHHhcCCCCEEeCCCcC
Confidence 44444321 234544433 3345666665544 4554322 3456777777655542 233457
Q ss_pred CHHHHHHHhhcCCceEEeeeccccccccc-ccHHHHHHHhCCeEEecccC
Q 024050 165 SPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSPL 213 (273)
Q Consensus 165 ~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l~~~~~~~gi~v~a~spl 213 (273)
+++.++++++....+++|+..+-.---.+ ..+...|+++|+.+...+.+
T Consensus 289 ~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 338 (425)
T 3vcn_A 289 HVWDAKQLIEEQLIDYLRATVLHAGGITNLKKIAAFADLHHVKTGCHGAT 338 (425)
T ss_dssp SGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHGGGTCEECCCCCT
T ss_pred CHHHHHHHHHcCCCCeEecChhhcCCHHHHHHHHHHHHHcCCEEeeccCC
Confidence 88889999988888999998776542111 67899999999999887765
No 118
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=72.37 E-value=38 Score=29.59 Aligned_cols=155 Identities=10% Similarity=-0.015 Sum_probs=91.7
Q ss_pred CHHHHHHHHHHHHHC---CCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSK---GITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCE 115 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~---Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~ 115 (273)
+.++..+.++.+++. |++.|-.--....-..+...=+++++.-..++-|...... .++.+...+ +-
T Consensus 171 ~~e~~~~~a~~~~~~~~~G~~~iKlKvG~~~~~~d~~~v~avR~a~G~~~~l~vDaN~----------~~~~~~A~~-~~ 239 (390)
T 3ugv_A 171 PAEVAAEAVELKAEGQGTGFKGLKLRMGRDDPAVDIETAEAVWDAVGRDTALMVDFNQ----------GLDMAEAMH-RT 239 (390)
T ss_dssp HHHHHHHHHHHHHTTCTTCCSEEEEECCCSSHHHHHHHHHHHHHHHCTTSEEEEECTT----------CCCHHHHHH-HH
T ss_pred CHHHHHHHHHHHHHhhhCCCcEEEEecCCCCHHHHHHHHHHHHHHhCCCCEEEEECCC----------CCCHHHHHH-HH
Confidence 678888888899999 9997754321110012222333455411234444444321 134443322 22
Q ss_pred HHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-
Q 024050 116 ASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE- 193 (273)
Q Consensus 116 ~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~- 193 (273)
+.|+.+++ .++..|-... .++.+.++++.-.|. ..|=|-++...++++++....+++|+..+-.---.+
T Consensus 240 ~~l~~~~i-----~~iEqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~ 310 (390)
T 3ugv_A 240 RQIDDLGL-----EWIEEPVVYD----NFDGYAQLRHDLKTPLMIGENFYGPREMHQALQAGACDLVMPDFMRIGGVSGW 310 (390)
T ss_dssp HHHTTSCC-----SEEECCSCTT----CHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBHHHHTHHHHH
T ss_pred HHHHhhCC-----CEEECCCCcc----cHHHHHHHHHhcCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHH
Confidence 34454544 4455564432 356677777765443 344466888999999998888999987765432111
Q ss_pred ccHHHHHHHhCCeEEecccC
Q 024050 194 EEIIPLCRELGIGIVPYSPL 213 (273)
Q Consensus 194 ~~l~~~~~~~gi~v~a~spl 213 (273)
..+...|+++|+.+...+.+
T Consensus 311 ~~i~~~A~~~gi~~~~h~~~ 330 (390)
T 3ugv_A 311 MRAAGVAGAWGIPMSTHLYP 330 (390)
T ss_dssp HHHHHHHHHHTCCBCCBSCH
T ss_pred HHHHHHHHHcCCEEeecCHH
Confidence 67899999999999876654
No 119
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=72.30 E-value=34 Score=30.60 Aligned_cols=96 Identities=14% Similarity=0.093 Sum_probs=68.8
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCC--CCHHHHHHHhhcCCceEEe
Q 024050 105 GAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE--ASPGTIRRAHAVHPITAVQ 182 (273)
Q Consensus 105 ~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~--~~~~~l~~~~~~~~~~~~q 182 (273)
++++...+.+.+.++.+ ++++|..|-...+ |+.+.+|.++.+|-=.|=-. .+++.+.++++..-.+++|
T Consensus 270 ~t~~e~~~~~~~ll~~y-----~i~~IEdPl~~dD----~~g~~~L~~~~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~ 340 (439)
T 2akz_A 270 ITGDQLGALYQDFVRDY-----PVVSIEDPFDQDD----WAAWSKFTANVGIQIVGDDLTVTNPKRIERAVEEKACNCLL 340 (439)
T ss_dssp BCHHHHHHHHHHHHHHS-----CEEEEECCSCTTC----HHHHHHHHHTCSSEEEESTTTTTCHHHHHHHHHTTCCSEEE
T ss_pred CCHHHHHHHHHHHHHhC-----CCcEEECCCCccc----HHHHHHHHhCCCCEEEeCCCccCCHHHHHHHHHhCCCCEEE
Confidence 35666666666666654 5888888865433 78888888887775444332 3789999999988888999
Q ss_pred eeccccccccc-ccHHHHHHHhCCeEEe
Q 024050 183 MEWSLWTRDIE-EEIIPLCRELGIGIVP 209 (273)
Q Consensus 183 ~~~~l~~~~~~-~~l~~~~~~~gi~v~a 209 (273)
+..|-.---.+ .++...|+++|+.++.
T Consensus 341 iKv~qiGGitea~~ia~lA~~~g~~~~~ 368 (439)
T 2akz_A 341 LKVNQIGSVTEAIQACKLAQENGWGVMV 368 (439)
T ss_dssp ECHHHHCCHHHHHHHHHHHHHTTCEEEE
T ss_pred echhhcCCHHHHHHHHHHHHHCCCeEEe
Confidence 87765433222 6789999999999766
No 120
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=71.67 E-value=47 Score=28.35 Aligned_cols=95 Identities=9% Similarity=-0.064 Sum_probs=55.0
Q ss_pred CEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCC--CCCHHHHHHHHHHHHHcCCccEEec
Q 024050 84 KIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT--SVPIEETIGEMKKLVEEGKIKYIGL 161 (273)
Q Consensus 84 ~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~--~~~~~~~~~~L~~l~~~G~ir~iGv 161 (273)
++-|..|+.+.....+ ..+.+... .+-+.|+..|+|||++---..... .......++.+.++++.=.+--|++
T Consensus 209 ~~pv~vris~~~~~~~----g~~~~~~~-~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~ 283 (338)
T 1z41_A 209 DGPLFVRVSASDYTDK----GLDIADHI-GFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQADMATGAV 283 (338)
T ss_dssp CSCEEEEEECCCCSTT----SCCHHHHH-HHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHCCEEEEC
T ss_pred CCcEEEEecCcccCCC----CCCHHHHH-HHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCCCCEEEE
Confidence 4557778776542111 23444433 455667888988887753211011 0111113455555655545666777
Q ss_pred CCC-CHHHHHHHhhcCCceEEee
Q 024050 162 SEA-SPGTIRRAHAVHPITAVQM 183 (273)
Q Consensus 162 S~~-~~~~l~~~~~~~~~~~~q~ 183 (273)
... +++..+++++....+.+++
T Consensus 284 Ggi~s~~~a~~~l~~G~aD~V~i 306 (338)
T 1z41_A 284 GMITDGSMAEEILQNGRADLIFI 306 (338)
T ss_dssp SSCCSHHHHHHHHHTTSCSEEEE
T ss_pred CCCCCHHHHHHHHHcCCceEEee
Confidence 776 7888999988876777776
No 121
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=71.65 E-value=53 Score=28.91 Aligned_cols=155 Identities=13% Similarity=0.146 Sum_probs=94.6
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEA 116 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~ 116 (273)
+.++..+..+.+.+.|++.|=.....+.....+.+ +++++ .+.-++.+=.-. .++.+...+
T Consensus 188 ~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~v-~~vR~~~g~~~~l~vDaN~------------~~~~~~A~~---- 250 (412)
T 4h1z_A 188 TRAKRAELAAAWQAKGFSSFKFASPVADDGVAKEM-EILRERLGPAVRIACDMHW------------AHTASEAVA---- 250 (412)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEGGGCTTCHHHHH-HHHHHHHCSSSEEEEECCS------------CCCHHHHHH----
T ss_pred cHHHHHHHHHHHHhcCcceeccccccchhhHHHHH-HHHHhccCCeEEEEecccc------------CCCHHHHHH----
Confidence 56777888888899999877654333322233333 34444 233233332211 234443333
Q ss_pred HHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeecccccc-cccc
Q 024050 117 SLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTR-DIEE 194 (273)
Q Consensus 117 sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~-~~~~ 194 (273)
.+++| +..++.++..|-...+ ++.+.+|+++-.+. +.|=|.++...+.++++...++++|+...- -- ..-.
T Consensus 251 ~~~~l--~~~~l~~iEqP~~~~d----~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~div~~d~~~-GGit~~~ 323 (412)
T 4h1z_A 251 LIKAM--EPHGLWFAEAPVRTED----IDGLARVAASVSTAIAVGEEWRTVHDMVPRVARRALAIVQPEMGH-KGITQFM 323 (412)
T ss_dssp HHHHH--GGGCEEEEECCSCTTC----HHHHHHHHHHCSSEEEECTTCCSHHHHHHHHHTTCCSEECCCHHH-HHHHHHH
T ss_pred HHHhh--cccccceecCCCCccc----hHHHHHHHhhcCCccccCCcccchHhHHHHHHcCCCCEEEecCCC-CChHHHH
Confidence 22333 3456788888855443 56677777765543 345566888999999988888899987542 11 0116
Q ss_pred cHHHHHHHhCCeEEecccCCCcc
Q 024050 195 EIIPLCRELGIGIVPYSPLGRGF 217 (273)
Q Consensus 195 ~l~~~~~~~gi~v~a~spl~~G~ 217 (273)
.+...|+.+|+.+...+++..|+
T Consensus 324 kia~~A~~~gi~v~~h~~~~~~i 346 (412)
T 4h1z_A 324 RIGAYAHVHHIKVIPHATIGAGI 346 (412)
T ss_dssp HHHHHHHHTTCEECCCCCSSCSH
T ss_pred HHHHHHHHCCCcEEecCCcchHH
Confidence 68889999999999988877654
No 122
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=71.20 E-value=45 Score=29.75 Aligned_cols=70 Identities=13% Similarity=-0.007 Sum_probs=51.7
Q ss_pred HHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-ccHHHHHHHhCCeEEeccc
Q 024050 143 TIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSP 212 (273)
Q Consensus 143 ~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l~~~~~~~gi~v~a~sp 212 (273)
.++.+.++++.-.|- ..|=+-++.+.++++++....+++|+..+-.---.+ ..+...|+++|+.++..+.
T Consensus 279 d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 350 (440)
T 3t6c_A 279 NTEWLKMLRQQSSTPIAMGELFVNVNEWKPLIDNKLIDYIRCHISSIGGITPAKKIAIYSELNGVRTAWHSP 350 (440)
T ss_dssp GGGGHHHHHHHCCSCEEECTTCCSHHHHHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHHHHTTCEECCCCS
T ss_pred hHHHHHHHHhhcCCCEEeCcccCCHHHHHHHHHcCCccceeechhhhCCHHHHHHHHHHHHHcCCEEEeccC
Confidence 456677787765443 334456888999999998888999998776542212 6789999999999987765
No 123
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=71.08 E-value=12 Score=31.56 Aligned_cols=103 Identities=10% Similarity=0.045 Sum_probs=62.1
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcCCceEEeee
Q 024050 105 GAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQME 184 (273)
Q Consensus 105 ~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~q~~ 184 (273)
++.+ -+..+-+.|+++|+++|.+-....|.......+.++.+..+.+...++..++. .+.+.++++++.. ++.+.+.
T Consensus 27 ~~~e-~k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~a~~aG-~~~v~i~ 103 (302)
T 2ftp_A 27 IEVA-DKIRLVDDLSAAGLDYIEVGSFVSPKWVPQMAGSAEVFAGIRQRPGVTYAALA-PNLKGFEAALESG-VKEVAVF 103 (302)
T ss_dssp CCHH-HHHHHHHHHHHTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCTTSEEEEEC-CSHHHHHHHHHTT-CCEEEEE
T ss_pred CCHH-HHHHHHHHHHHcCcCEEEECCCcCccccccccCHHHHHHHhhhcCCCEEEEEe-CCHHHHHHHHhCC-cCEEEEE
Confidence 4444 35566667899999999998866554221122334444555444556666665 4677888888763 3344432
Q ss_pred ccccc----------cc--c--cccHHHHHHHhCCeEEec
Q 024050 185 WSLWT----------RD--I--EEEIIPLCRELGIGIVPY 210 (273)
Q Consensus 185 ~~l~~----------~~--~--~~~l~~~~~~~gi~v~a~ 210 (273)
.+.-+ .. . ..+++++|+++|+.|.++
T Consensus 104 ~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~ 143 (302)
T 2ftp_A 104 AAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGY 143 (302)
T ss_dssp EESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred EecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence 22211 11 0 167899999999998754
No 124
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=70.83 E-value=11 Score=31.72 Aligned_cols=106 Identities=13% Similarity=0.038 Sum_probs=64.0
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcCCceEEeee
Q 024050 105 GAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQME 184 (273)
Q Consensus 105 ~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~q~~ 184 (273)
++.+. +..+-+.|.++|+++|.+-....+.....+.+.++.+..+.+...++...+. .+.+.++++.+.. ++.+.+.
T Consensus 23 ~~~e~-k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~~~~~v~~l~-~n~~~i~~a~~~G-~~~V~i~ 99 (295)
T 1ydn_A 23 VPTAD-KIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRADGVRYSVLV-PNMKGYEAAAAAH-ADEIAVF 99 (295)
T ss_dssp CCHHH-HHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCSSSEEEEEC-SSHHHHHHHHHTT-CSEEEEE
T ss_pred cCHHH-HHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhCCCCEEEEEe-CCHHHHHHHHHCC-CCEEEEE
Confidence 44443 4556667788999999997765543211123566777777665566665665 5667788877763 3344443
Q ss_pred cccc--------cccc------cccHHHHHHHhCCeEEecccC
Q 024050 185 WSLW--------TRDI------EEEIIPLCRELGIGIVPYSPL 213 (273)
Q Consensus 185 ~~l~--------~~~~------~~~l~~~~~~~gi~v~a~spl 213 (273)
.+.- .+.. -.+.+++|+++|+.|.++-..
T Consensus 100 ~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~ 142 (295)
T 1ydn_A 100 ISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSC 142 (295)
T ss_dssp EESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred EecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEE
Confidence 2111 1111 156789999999999755443
No 125
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=69.12 E-value=60 Score=28.57 Aligned_cols=153 Identities=10% Similarity=0.038 Sum_probs=92.2
Q ss_pred CHHHHHHHHHHHHHCCCCccccccC--CC--CC--------cHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCC
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADV--YG--QN--------ANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGA 106 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~--Yg--~g--------~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~ 106 (273)
+.++..+..+.+++.|++.|-.-.. |. .| ......=+++++.-.+++-|...... .++
T Consensus 144 ~~e~~~~~a~~~~~~G~~~iKlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDaN~----------~~~ 213 (412)
T 4e4u_A 144 DPDLAAECAAENVKLGFTAVKFDPAGPYTAYSGHQLSLEVLDRCELFCRRVREAVGSKADLLFGTHG----------QMV 213 (412)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCS----------CBC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCccccccccchhhHHHHHHHHHHHHHHhCCCCeEEEECCC----------CCC
Confidence 6788888889999999998876321 11 00 01111223444421234445544321 134
Q ss_pred HHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccE-EecCCCCHHHHHHHhhcCCceEEeeec
Q 024050 107 PDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY-IGLSEASPGTIRRAHAVHPITAVQMEW 185 (273)
Q Consensus 107 ~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~-iGvS~~~~~~l~~~~~~~~~~~~q~~~ 185 (273)
.+...+ +-+.|+.+++++ +..|-... .++.+.++++.-.|-= .|=+-++.+.++++++....+++|+..
T Consensus 214 ~~~A~~-~~~~L~~~~i~~-----iEeP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~ 283 (412)
T 4e4u_A 214 PSSAIR-LAKRLEKYDPLW-----FEEPVPPG----QEEAIAQVAKHTSIPIATGERLTTKYEFHKLLQAGGASILQLNV 283 (412)
T ss_dssp HHHHHH-HHHHHGGGCCSE-----EECCSCSS----CHHHHHHHHHTCSSCEEECTTCCHHHHHHHHHHTTCCSEECCCT
T ss_pred HHHHHH-HHHHhhhcCCcE-----EECCCChh----hHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCCCEEEeCc
Confidence 444333 334566666544 44554322 3577788887755542 233457788899999988899999987
Q ss_pred cccccccc-ccHHHHHHHhCCeEEecc
Q 024050 186 SLWTRDIE-EEIIPLCRELGIGIVPYS 211 (273)
Q Consensus 186 ~l~~~~~~-~~l~~~~~~~gi~v~a~s 211 (273)
+-.---.+ ..+...|+++|+.+...+
T Consensus 284 ~~~GGit~~~kia~~A~~~gi~v~~h~ 310 (412)
T 4e4u_A 284 ARVGGLLEAKKIATLAEVHYAQIAPHL 310 (412)
T ss_dssp TTTTSHHHHHHHHHHHHHTTCEECCCC
T ss_pred cccCCHHHHHHHHHHHHHcCCEEEecC
Confidence 76542112 678999999999987664
No 126
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=69.01 E-value=13 Score=32.12 Aligned_cols=104 Identities=16% Similarity=0.189 Sum_probs=57.3
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEE-----EecCCCCCCCHHHHHHHHHHHHHc-CCccEEec---CCCCHHHHHHHhhc
Q 024050 105 GAPDYVRSCCEASLKRLDVDYIDLY-----YQHRVDTSVPIEETIGEMKKLVEE-GKIKYIGL---SEASPGTIRRAHAV 175 (273)
Q Consensus 105 ~~~~~i~~~~~~sL~~L~~d~iDl~-----~lh~~~~~~~~~~~~~~L~~l~~~-G~ir~iGv---S~~~~~~l~~~~~~ 175 (273)
++.+.. ..+-+.|.++|+|+|.+- -.-+|.........|+.++++++. ..++...+ .....+.++++.+.
T Consensus 27 ~~~e~k-~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~~~~~~i~~l~~p~~~~~~~i~~a~~a 105 (345)
T 1nvm_A 27 YTLDDV-RAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEISHAQIATLLLPGIGSVHDLKNAYQA 105 (345)
T ss_dssp CCHHHH-HHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTTCSSSEEEEEECBTTBCHHHHHHHHHH
T ss_pred CCHHHH-HHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhhCCCCEEEEEecCCcccHHHHHHHHhC
Confidence 444444 445556677998888883 222222111223456666666654 24555555 22245667777765
Q ss_pred CCceEEeeecccccccccccHHHHHHHhCCeEEec
Q 024050 176 HPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPY 210 (273)
Q Consensus 176 ~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~ 210 (273)
. ++.+.+..++-+.+.-.+.+++|+++|+.++.+
T Consensus 106 G-vd~v~I~~~~s~~~~~~~~i~~ak~~G~~v~~~ 139 (345)
T 1nvm_A 106 G-ARVVRVATHCTEADVSKQHIEYARNLGMDTVGF 139 (345)
T ss_dssp T-CCEEEEEEETTCGGGGHHHHHHHHHHTCEEEEE
T ss_pred C-cCEEEEEEeccHHHHHHHHHHHHHHCCCEEEEE
Confidence 2 333333322221122277999999999998876
No 127
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=68.99 E-value=61 Score=28.96 Aligned_cols=97 Identities=13% Similarity=0.063 Sum_probs=67.5
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcC-CccEEec--CCCCHHHHHHHhhcCCceEE
Q 024050 105 GAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEG-KIKYIGL--SEASPGTIRRAHAVHPITAV 181 (273)
Q Consensus 105 ~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G-~ir~iGv--S~~~~~~l~~~~~~~~~~~~ 181 (273)
.+++.+.+-.++.++.. ++++|..|-...+ |+.+.+|.++- +|--+|= ...+++.++++++....+++
T Consensus 279 ~t~~elid~y~~lle~y-----pI~~IEDPl~~dD----~eg~a~Lt~~lg~i~IvGDEl~vTn~~~i~~~Ie~~a~n~I 349 (441)
T 3qtp_A 279 KDVDGLIAEYVDYGKHY-----PIASIEDPFAEDD----WAAWNKFTVEHGNFQIVGDDLLVTNPARVQMAMDKNACNSV 349 (441)
T ss_dssp ECHHHHHHHHHHHHHHS-----CEEEEESCSCTTC----HHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEE
T ss_pred cCHHHHHHHHHHHhhhc-----ceeeecCCCChHH----HHHHHHHHHhcCCceEEeccccccCHHHHHHHHHcCCCCEE
Confidence 46777777777777754 4888888865444 44555555443 5655562 23478999999988888888
Q ss_pred eeeccccccccc-ccHHHHHHHhCCeEEec
Q 024050 182 QMEWSLWTRDIE-EEIIPLCRELGIGIVPY 210 (273)
Q Consensus 182 q~~~~l~~~~~~-~~l~~~~~~~gi~v~a~ 210 (273)
|+..|-.---.+ .++...|+++|+.++.-
T Consensus 350 lIKvnqiGGITEalkaa~lA~~~G~~vmvs 379 (441)
T 3qtp_A 350 LIKVNQIGTLTETFKTIKMAQEKGWGVMAS 379 (441)
T ss_dssp EECGGGTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred EecccccccHHHHHHHHHHHHHcCCeEEEe
Confidence 988776543222 67889999999998753
No 128
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=68.81 E-value=56 Score=28.05 Aligned_cols=141 Identities=12% Similarity=0.137 Sum_probs=74.0
Q ss_pred CCCHHHHHHHHH-------HHHHCCCCcccccc-------------------CCCCCcHH---HHHHH---HHhcCCCCC
Q 024050 37 PVSEEDGISMIK-------HAFSKGITFFDTAD-------------------VYGQNANE---VLLGK---ALKQLPREK 84 (273)
Q Consensus 37 ~~~~~~~~~~l~-------~A~~~Gin~~DtA~-------------------~Yg~g~se---~~lg~---~l~~~~r~~ 84 (273)
.++.+|..++++ .|.++|+..++.-. .|| |.-| +++-+ ++++.-.++
T Consensus 141 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yG-GslenR~r~~~eiv~aVR~avG~d 219 (349)
T 3hgj_A 141 PLDEAGMERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYG-GSLENRMRFPLQVAQAVREVVPRE 219 (349)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTS-SSHHHHHHHHHHHHHHHHHHSCTT
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCC-cCHHHHHHHHHHHHHHHHHHhcCC
Confidence 356666665554 56678988776432 233 2222 12222 333322235
Q ss_pred EEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEE-ecCCCCC--CCHHHHHHHHHHHHHcCCccEEec
Q 024050 85 IQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYY-QHRVDTS--VPIEETIGEMKKLVEEGKIKYIGL 161 (273)
Q Consensus 85 ~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~-lh~~~~~--~~~~~~~~~L~~l~~~G~ir~iGv 161 (273)
+-|..|+.+.....+ ..+.+... .+-+.|+..|+|||++-. -..+... ......++.+.++++.-.+--|++
T Consensus 220 ~pV~vRls~~~~~~~----g~~~~~~~-~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~ 294 (349)
T 3hgj_A 220 LPLFVRVSATDWGEG----GWSLEDTL-AFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGAV 294 (349)
T ss_dssp SCEEEEEESCCCSTT----SCCHHHHH-HHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEEC
T ss_pred ceEEEEeccccccCC----CCCHHHHH-HHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEEE
Confidence 557778776542111 23444433 455667788887777653 1111100 011113445555555445555666
Q ss_pred CC-CCHHHHHHHhhcCCceEEee
Q 024050 162 SE-ASPGTIRRAHAVHPITAVQM 183 (273)
Q Consensus 162 S~-~~~~~l~~~~~~~~~~~~q~ 183 (273)
.. ++++..+++++....+.+++
T Consensus 295 Ggi~t~e~a~~~l~~G~aD~V~i 317 (349)
T 3hgj_A 295 GLITTPEQAETLLQAGSADLVLL 317 (349)
T ss_dssp SSCCCHHHHHHHHHTTSCSEEEE
T ss_pred CCCCCHHHHHHHHHCCCceEEEe
Confidence 65 47888888888776777766
No 129
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=68.33 E-value=55 Score=27.80 Aligned_cols=159 Identities=14% Similarity=0.012 Sum_probs=91.0
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.++..+.++.+++.|++.|-.--.-..-..+...=+++++.-.+++-|..=. +. .++++...+-++. |
T Consensus 116 ~~e~~~~~a~~~~~~G~~~~KiKvg~~~~~~d~~~v~avr~~~g~~~~L~vDa--N~--------~~~~~~A~~~~~~-l 184 (332)
T 2ozt_A 116 SGQAALEQWQQSWQRGQTTFKWKVGVMSPEEEQAILKALLAALPPGAKLRLDA--NG--------SWDRATANRWFAW-L 184 (332)
T ss_dssp TGGGHHHHHHHHHHTTCCEEEEECSSSCHHHHHHHHHHHHHHSCTTCEEEEEC--TT--------CCCHHHHHHHHHH-H
T ss_pred ChHHHHHHHHHHHHcCCcEEEEEeCCCChHHHHHHHHHHHHHcCCCCEEEEcc--cC--------CCCHHHHHHHHHH-H
Confidence 35667777788888999876542211000111222234444112233332221 11 2455555444433 5
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCc-cEEecCCCCHHHHHHHhhcCCceEEeeecccccccccccHH
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIEEEII 197 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~~~l~ 197 (273)
+.+. -.++.++..|-...+ ++.+.+|.++-.| -..|=|.++...+.++++..-.+++|+..+..-- . ..+.
T Consensus 185 ~~~~--~~~i~~iEqP~~~~d----~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~a~~~i~ik~~~~GG-i-~~i~ 256 (332)
T 2ozt_A 185 DRHG--NGKIEYVEQPLPPDQ----WQALLSLAQTVTTAIALDESVVSAAEVQRWVDRGWPGFFVIKTALFGD-P-DSLS 256 (332)
T ss_dssp HHHC--CTTEEEEECCSCTTC----HHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHSC-H-HHHH
T ss_pred Hhhc--cCCcceeECCCCCCC----HHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEEChhhhCC-H-HHHH
Confidence 5542 137888888865433 5556666655433 2445566788899998888777788886655422 1 4688
Q ss_pred HHHHHh--CCeEEecccCCCc
Q 024050 198 PLCREL--GIGIVPYSPLGRG 216 (273)
Q Consensus 198 ~~~~~~--gi~v~a~spl~~G 216 (273)
+.|+++ |+.++..+.+..+
T Consensus 257 ~~A~~~~~gi~~~~~~~~es~ 277 (332)
T 2ozt_A 257 LLLRRGLEPQRLVFSSALEGA 277 (332)
T ss_dssp HHHHTTCCGGGEEEBCCSCCH
T ss_pred HHHHHhCCCCcEEEeCCcchH
Confidence 999999 9999888765433
No 130
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=68.25 E-value=24 Score=28.01 Aligned_cols=70 Identities=11% Similarity=0.121 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHcCCCcccEEEecCCCCC-CCHHHHHHHHHHHHHcCCccEEecC-CCCHHHHHHHhhcCCceEEeee
Q 024050 107 PDYVRSCCEASLKRLDVDYIDLYYQHRVDTS-VPIEETIGEMKKLVEEGKIKYIGLS-EASPGTIRRAHAVHPITAVQME 184 (273)
Q Consensus 107 ~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~-~~~~~~~~~L~~l~~~G~ir~iGvS-~~~~~~l~~~~~~~~~~~~q~~ 184 (273)
++.++... .+|.||+-+.+. -+++. ... +....|.+.. ...+..+||- |.+++.+.++.+...++.+|++
T Consensus 12 ~eda~~a~-----~~GaD~iGfif~-~~SpR~V~~-~~a~~i~~~~-~~~~~~VgVfvn~~~~~i~~~~~~~~ld~vQLH 83 (205)
T 1nsj_A 12 LEDALFSV-----ESGADAVGFVFY-PKSKRYISP-EDARRISVEL-PPFVFRVGVFVNEEPEKILDVASYVQLNAVQLH 83 (205)
T ss_dssp HHHHHHHH-----HHTCSEEEEECC-TTCTTBCCH-HHHHHHHHHS-CSSSEEEEEESSCCHHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHH-----HcCCCEEEEEec-CCCCCcCCH-HHHHHHHHhC-CCCCCEEEEEeCCCHHHHHHHHHhhCCCEEEEC
Confidence 45555443 589999999853 22222 223 3333333222 2468899994 5788889998888889999985
No 131
>3pfr_A Mandelate racemase/muconate lactonizing protein; emolase superfamily fold, D-glucarate dehydratase, D-glucara isomerase; HET: GKR; 1.90A {Actinobacillus succinogenes} PDB: 3n6j_A 3n6h_A* 4gyp_C*
Probab=68.02 E-value=29 Score=31.17 Aligned_cols=156 Identities=15% Similarity=0.071 Sum_probs=85.6
Q ss_pred CHHHHHHHHHHHHH-CCCCccccccCCCCCcHHHHHHHHHhc-CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFS-KGITFFDTADVYGQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEA 116 (273)
Q Consensus 39 ~~~~~~~~l~~A~~-~Gin~~DtA~~Yg~g~se~~lg~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~ 116 (273)
+.++..+..+.+++ .|++.|=.--.......+...=+++++ .+ ++-|..=... .++.+ ...+
T Consensus 185 ~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea~p--d~~L~vDaN~----------~w~~~----~A~~ 248 (455)
T 3pfr_A 185 DTQAVIELAAASKDRYGFKDFKLKGGVFEGSKEIDTVIELKKHFP--DARITLDPNG----------CWSLD----EAIQ 248 (455)
T ss_dssp SHHHHHHHHHHHHHHHCCSCEEEECSSSCHHHHHHHHHHHHHHCT--TCCEEEECTT----------BSCHH----HHHH
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEcCCCCCHHHHHHHHHHHHHhCC--CCeEeecCCC----------CCCHH----HHHH
Confidence 67888888888887 599876432111111122222234554 43 3333222111 13333 2334
Q ss_pred HHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCc-cEEecCCCCHHHHHHHhhcCCceEEeeeccccccccccc
Q 024050 117 SLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIEEE 195 (273)
Q Consensus 117 sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~~~ 195 (273)
.+++|. ++ +.++..|-...+....++.|.++.+.-.| -+.|-+.++...+..+++...++++|.....---..-..
T Consensus 249 ~~~~L~-~~--l~~iEeP~~~~d~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~di~~~d~~~GGit~a~k 325 (455)
T 3pfr_A 249 LCKGLN-DV--LTYAEDPCIGENGYSGREIMAEFRRRTGIPTATNMIATNWREMCHAIMLQSVDIPLADPHFWTLTGASR 325 (455)
T ss_dssp HHTTCT-TT--CSEEESCBCCBTTBCHHHHHHHHHHHHCCCEEESSSCCSHHHHHHHHHHTCCSEEBCCHHHHCHHHHHH
T ss_pred HHHhhc-cc--ceeeecCCChhhccchHHHHHHHHhcCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEecCCcCCHHHHHH
Confidence 455564 34 66777775433321125566666654333 345556677778888888877888887642111111167
Q ss_pred HHHHHHHhCCeEEecccC
Q 024050 196 IIPLCRELGIGIVPYSPL 213 (273)
Q Consensus 196 l~~~~~~~gi~v~a~spl 213 (273)
+...|+.+|+.+...+..
T Consensus 326 ia~lA~a~gv~~~~h~~~ 343 (455)
T 3pfr_A 326 VAQLCNEWGLTWGCHSNN 343 (455)
T ss_dssp HHHHHHHTTCCCBCCCCS
T ss_pred HHHHHHHcCCEEEecCCc
Confidence 889999999998766554
No 132
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=67.69 E-value=60 Score=28.01 Aligned_cols=148 Identities=11% Similarity=0.075 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc--CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 40 EEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ--LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 40 ~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~--~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
.++..+.+..+.+.|++.+=.--..+.-...+.+ +++++ .+.-++.|=.-. .++.+...+-+ +.
T Consensus 145 ~~~~~~~~~~~~~~Gf~~~K~k~g~~~~~di~~v-~avr~~~g~~~~l~vDaN~------------~~~~~~A~~~~-~~ 210 (378)
T 4hpn_A 145 VSDNASEMAERRAEGFHACKIKIGFGVEEDLRVI-AAVREAIGPDMRLMIDANH------------GYTVTEAITLG-DR 210 (378)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHH-HHHHHHHTTTSEEEEECTT------------CCCHHHHHHHH-HH
T ss_pred HHHHHHHHHHHHHhccceecccccCChHHHHHHH-HHHHHhcCCcEEEEEecCc------------ccCHHHHHHHH-hh
Confidence 3555566677788899876443322210111223 34443 233333332211 13444433322 23
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-cc
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~ 195 (273)
|+. .++.++..|-...+ ++.+.+|++.-.+. +.|=|.++...+.++++...++++|+..+-.---.+ ..
T Consensus 211 l~~-----~~i~~iEeP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~~d~~~~GGit~~~~ 281 (378)
T 4hpn_A 211 AAG-----FGIDWFEEPVVPEQ----LDAYARVRAGQPIPVAGGETWHGRYGMWQALSAGAVDILQPDLCGCGGFSEIQK 281 (378)
T ss_dssp HGG-----GCCSCEECCSCTTC----HHHHHHHHHHSSSCEEECTTCCHHHHHHHHHHTTCCSEECCBTTTTTHHHHHHH
T ss_pred hhh-----cccchhhcCCCccc----hhhhHHHHhhCCceeeCCcCccchHhHHHHHHcCCCCEEeeCCeeCCChhHHHH
Confidence 443 45556666654333 56777787766553 445567888899999998888999987765432111 67
Q ss_pred HHHHHHHhCCeEEec
Q 024050 196 IIPLCRELGIGIVPY 210 (273)
Q Consensus 196 l~~~~~~~gi~v~a~ 210 (273)
+...|+++|+.++..
T Consensus 282 ia~~A~~~gi~v~~h 296 (378)
T 4hpn_A 282 IATLATLHGVRIVPH 296 (378)
T ss_dssp HHHHHHHHTCEECCB
T ss_pred HHHHHHHcCCeEEeC
Confidence 889999999998644
No 133
>1gk8_I Ribulose bisphosphate carboxylase small chain 1; lyase, rubisco, photosynthesis; HET: KCX CAP; 1.4A {Chlamydomonas reinhardtii} SCOP: d.73.1.1 PDB: 2v63_I* 2v67_I* 2v68_I* 2v69_I* 2v6a_I* 2vdh_I* 2vdi_I* 1uw9_C* 1uwa_C* 1ir2_I* 1uzd_C* 1uzh_C*
Probab=67.63 E-value=13 Score=27.63 Aligned_cols=96 Identities=16% Similarity=0.186 Sum_probs=63.2
Q ss_pred eccccCCCCCCCCCCHHHHHHHHHHHHHCCCC----ccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCcc
Q 024050 25 YGCMNLSGGYSSPVSEEDGISMIKHAFSKGIT----FFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAG 100 (273)
Q Consensus 25 lG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin----~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~ 100 (273)
|||.++ =.++++++..+.|++++..|.+ |-|....|-.+.+-..+|..-...+|...+..-|++...
T Consensus 12 ~etfSy----LP~lt~eqI~kQI~YlL~qGw~p~lEf~d~~~~~r~~~~~~~~~~~~~~yyd~~YW~mWkLPmFg----- 82 (140)
T 1gk8_I 12 FETFSY----LPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFG----- 82 (140)
T ss_dssp CSTTTT----SSCCCHHHHHHHHHHHHHTTCEEEEEEECGGGTSCBCGGGGGCSSCCTTCCBTSSCEEESCCCTT-----
T ss_pred eccccc----CCCCCHHHHHHHHHHHHHCCCEeeEEeccCCcceecccccccccccCCCcCcCCeeeeCCcCCcC-----
Confidence 566543 3356899999999999999975 445555564222222222111115678888888875443
Q ss_pred ccccCCHHHHHHHHHHHHHHcCCCcccEEEec
Q 024050 101 VIVKGAPDYVRSCCEASLKRLDVDYIDLYYQH 132 (273)
Q Consensus 101 ~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh 132 (273)
..++..+...|++.++.---.||-|+-+.
T Consensus 83 ---~td~~qVl~El~~C~k~~P~~YVRligfD 111 (140)
T 1gk8_I 83 ---CRDPMQVLREIVACTKAFPDAYVRLVAFD 111 (140)
T ss_dssp ---CCCHHHHHHHHHHHHHHCTTSEEEEEEEE
T ss_pred ---CCCHHHHHHHHHHHHHHCCCCeEEEEEEe
Confidence 34688999999999998877777765443
No 134
>3p0w_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, protein structure initiative; HET: GKR; 1.71A {Ralstonia pickettii} PDB: 4hn8_A 3nxl_A
Probab=67.50 E-value=27 Score=31.50 Aligned_cols=156 Identities=14% Similarity=0.048 Sum_probs=87.6
Q ss_pred CHHHHHHHHHHHHH-CCCCccccccCCCCCcHHHHHHHHHhc-CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFS-KGITFFDTADVYGQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEA 116 (273)
Q Consensus 39 ~~~~~~~~l~~A~~-~Gin~~DtA~~Yg~g~se~~lg~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~ 116 (273)
+.++..+..+.+++ .|++.|=.--.......+...=+++++ . .++-|..=... .++.+ +..+
T Consensus 200 ~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~rv~avRea~--pd~~L~vDaN~----------~w~~~----~Ai~ 263 (470)
T 3p0w_A 200 TPAAIARLAEAATERYGFADFKLKGGVMPGAEEMEAIAAIKARF--PHARVTLDPNG----------AWSLN----EAIA 263 (470)
T ss_dssp SHHHHHHHHHHHHHHHCCSEEEEECSSSCHHHHHHHHHHHHHHC--TTSEEEEECTT----------BBCHH----HHHH
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEeCCCCCHHHHHHHHHHHHHhC--CCCeEEeeCCC----------CCCHH----HHHH
Confidence 67888888888888 699876432111111122222234554 4 24444433221 13333 2334
Q ss_pred HHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCc-cEEecCCCCHHHHHHHhhcCCceEEeeeccccccccccc
Q 024050 117 SLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIEEE 195 (273)
Q Consensus 117 sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~~~ 195 (273)
.+++|. ++ +.++..|-...+....++.+.++.+.-.| -+.|=+.++...+.++++...++++|.....---..-..
T Consensus 264 ~~~~Le-~~--l~~iEeP~~~~d~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~div~~d~~~GGit~a~k 340 (470)
T 3p0w_A 264 LCKGQG-HL--VAYAEDPCGPEAGYSGREVMAEFKRATGIPTATNMIATDWRQMGHAVQLHAVDIPLADPHFWTMQGSVR 340 (470)
T ss_dssp HHTTCT-TT--CSEEESCBCCBTTBCHHHHHHHHHHHHCCCEEESSSSCSHHHHHHHHHTTCCSEEBCCHHHHCHHHHHH
T ss_pred HHHhcc-cc--ceeecCCCChhhccchHHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcCCCCEEEecCccCCHHHHHH
Confidence 455664 34 66777775443321124556666654333 344556677888888888877888887642111111167
Q ss_pred HHHHHHHhCCeEEecccC
Q 024050 196 IIPLCRELGIGIVPYSPL 213 (273)
Q Consensus 196 l~~~~~~~gi~v~a~spl 213 (273)
+...|+.+|+.+...+..
T Consensus 341 ia~lA~a~gv~~~~h~~~ 358 (470)
T 3p0w_A 341 VAQLCDEWGLTWGSHSNN 358 (470)
T ss_dssp HHHHHHHHTCCCBCCCCS
T ss_pred HHHHHHHcCCEEEecCCc
Confidence 889999999998776654
No 135
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=67.06 E-value=48 Score=28.92 Aligned_cols=152 Identities=9% Similarity=0.040 Sum_probs=86.2
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcH-HHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNAN-EVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~s-e~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
+.++..+.++.+.+.|++.|=.--. +.... +...=+++++.-.+++.|..-... .++.+... +.
T Consensus 164 ~~~~~~~~~~~~~~~G~~~~Kikvg-~~~~~~d~~~v~avR~~~G~~~~l~vDaN~----------~~~~~~A~----~~ 228 (388)
T 4h83_A 164 PLGSIADEMHNYQELGLAGVKFKVG-GLSAAEDAARITAAREAAGDDFIICIDANQ----------GYKPAVAV----DL 228 (388)
T ss_dssp TTCSHHHHHHHHHHHTBSEEEEECS-SSCHHHHHHHHHHHHHHHCSSSEEEEECTT----------CBCHHHHH----HH
T ss_pred CHHHHHHHHHHHHHcCCceEeecCC-CCCHHHHHHHHHHHHHhcCCCeEEEEecCc----------CCCHHHHH----HH
Confidence 3456667778888999987643221 11111 111223444311223333332211 13443332 33
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-cc
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~ 195 (273)
+++| +..++.++..|-. ..+.++.+.++++...|. +.|=|.++...+.++++...++++|+..+-.---.+ ..
T Consensus 229 ~~~l--~~~~~~~iEeP~~---~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~~d~~~~GGit~~~k 303 (388)
T 4h83_A 229 SRRI--ADLNIRWFEEPVE---WHNDKRSMRDVRYQGSVPVCAGQTEFSASGCRDLMETGAIDVCNFDSSWSGGPTAWLR 303 (388)
T ss_dssp HHHT--TTSCCCCEESCBC---STTHHHHHHHHHHHSSSCEEECTTCSSHHHHHHHHHHTCCSEECCCGGGTTCHHHHHH
T ss_pred HHHh--hhcCcceeecCcc---cccchHHHHHHHhhcCCCccCCccccChHhHHHHHHcCCCCeEeecceeCCCHHHHHH
Confidence 3444 2345666666532 233566777788776653 445577899999999998888999987665432111 66
Q ss_pred HHHHHHHhCCeEEec
Q 024050 196 IIPLCRELGIGIVPY 210 (273)
Q Consensus 196 l~~~~~~~gi~v~a~ 210 (273)
+...|+.+||.|..+
T Consensus 304 ia~~A~~~gv~v~~h 318 (388)
T 4h83_A 304 TAAIATSYDVQMGHH 318 (388)
T ss_dssp HHHHHHHTTCEECCC
T ss_pred HHHHHHHCCCEEEec
Confidence 888999999987543
No 136
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=66.07 E-value=43 Score=29.65 Aligned_cols=154 Identities=13% Similarity=0.151 Sum_probs=92.4
Q ss_pred CHHHHHHHHHHHHHCCCCcccccc-CCC-------------CC---c------HHHHHHHHHhcCCCCCEEEEeccCcCC
Q 024050 39 SEEDGISMIKHAFSKGITFFDTAD-VYG-------------QN---A------NEVLLGKALKQLPREKIQVATKFGIAG 95 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~-~Yg-------------~g---~------se~~lg~~l~~~~r~~~~i~tK~~~~~ 95 (273)
+.++..+.++.+++.|++.|-.-- .++ +| . ....+=+++++.-..++-|......
T Consensus 154 ~~e~~~~~a~~~~~~G~~~iKlKvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~e~v~avR~avG~d~~L~vDaN~-- 231 (422)
T 3tji_A 154 TLEALFASVDALIAQGYRHIRCQLGFYGGTPSALHAPDNPTPGAWFDQQEYMSNTVEMFHALREKYGWKLHILHDVHE-- 231 (422)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEEESCCCBCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHCSSSEEEEECTT--
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchhHHHHHHHHHHHHHHHcCCCCEEEEECCC--
Confidence 678888999999999999776321 111 11 0 1111223454411234445544321
Q ss_pred CCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhh
Q 024050 96 IGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHA 174 (273)
Q Consensus 96 ~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~ 174 (273)
.++.+...+ +-+.|+.++++++ ..|-.. +.++.+.++++.-.|- ..|=+-++.+.++++++
T Consensus 232 --------~~~~~~A~~-~~~~Le~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~ll~ 293 (422)
T 3tji_A 232 --------RLFPQQAVQ-LAKQLEPFQPYFI-----EDILPP----QQSAWLEQVRQQSCVPLALGELFNNPAEWHDLIV 293 (422)
T ss_dssp --------CSCHHHHHH-HHHHHGGGCCSEE-----ECCSCG----GGGGGHHHHHHHCCCCEEECTTCCSGGGTHHHHH
T ss_pred --------CCCHHHHHH-HHHHHHhhCCCeE-----ECCCCh----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHh
Confidence 134444333 2235666665444 445321 3456777887765554 23335578888999998
Q ss_pred cCCceEEeeeccccccccc-ccHHHHHHHhCCeEEeccc
Q 024050 175 VHPITAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSP 212 (273)
Q Consensus 175 ~~~~~~~q~~~~l~~~~~~-~~l~~~~~~~gi~v~a~sp 212 (273)
....+++|+..+-.---.+ ..+...|+.+|+.+...++
T Consensus 294 ~ga~d~v~~k~~~~GGit~~~kia~lA~a~gv~v~~h~~ 332 (422)
T 3tji_A 294 NRRIDFIRCHVSQIGGITPALKLAHLCQAFGVRLAWHGP 332 (422)
T ss_dssp TTCCSEECCCGGGGTSHHHHHHHHHHHHHTTCEECCCCC
T ss_pred cCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 8889999997776542111 6789999999999988776
No 137
>3mzn_A Glucarate dehydratase; lyase, structural genomics, protein structure initiative, PS nysgrc; 1.85A {Chromohalobacter salexigens} PDB: 3nfu_A
Probab=65.67 E-value=26 Score=31.45 Aligned_cols=156 Identities=14% Similarity=0.110 Sum_probs=86.1
Q ss_pred CHHHHHHHHHHHHH-CCCCccccccCCCCCcHHHHHHHHHhc-CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFS-KGITFFDTADVYGQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEA 116 (273)
Q Consensus 39 ~~~~~~~~l~~A~~-~Gin~~DtA~~Yg~g~se~~lg~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~ 116 (273)
+.++..+..+.+++ .|++.|=.--.......+...=+++++ .+ ++-|..=... .++.+. ..+
T Consensus 182 ~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea~p--d~~L~vDaN~----------~w~~~~----A~~ 245 (450)
T 3mzn_A 182 TPEAVANLARAAYDRYGFKDFKLKGGVLRGEEEADCIRALHEAFP--EARLALDPNG----------AWKLDE----AVR 245 (450)
T ss_dssp SHHHHHHHHHHHHHHHCCSEEEEECSSSCHHHHHHHHHHHHHHCT--TSEEEEECTT----------CBCHHH----HHH
T ss_pred CHHHHHHHHHHHHHhCCCCEEEECCCCCCHHHHHHHHHHHHHhCC--CCeEEEECCC----------CCCHHH----HHH
Confidence 67888888888887 599876432111111122222234554 42 4444332211 133332 233
Q ss_pred HHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCc-cEEecCCCCHHHHHHHhhcCCceEEeeeccccccccccc
Q 024050 117 SLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIEEE 195 (273)
Q Consensus 117 sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~~~ 195 (273)
.++.|. ++ +.++..|-...+....++.|.++.+.-.| -+.|-+.++...+.++++...++++|.....---..-..
T Consensus 246 ~~~~L~-~~--i~~iEeP~~~~d~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~di~~~d~~~GGit~a~k 322 (450)
T 3mzn_A 246 VLEPIK-HL--LSYAEDPCGQEGGFSGRETMAEFKKRTGLPTATNMIATDYKQLQYAVQLNSVDIPLADCHFWTMQGAVA 322 (450)
T ss_dssp HHGGGG-GG--CSEEESSBCCBTTBCHHHHHHHHHHHHCCCEEESSSSSSHHHHHHHHHHTCCSEEBCCHHHHCHHHHHH
T ss_pred HHHHhh-hc--cceeeCCCCcccccchHHHHHHHHHhcCCCEEeCCccCCHHHHHHHHHcCCCCEEEecCccCCHHHHHH
Confidence 455554 33 56677775443321224556666654333 344556677778888888877888887642111111167
Q ss_pred HHHHHHHhCCeEEecccC
Q 024050 196 IIPLCRELGIGIVPYSPL 213 (273)
Q Consensus 196 l~~~~~~~gi~v~a~spl 213 (273)
+...|+.+|+.+...+..
T Consensus 323 ia~lA~a~gv~~~~h~~~ 340 (450)
T 3mzn_A 323 VGELCNEWGMTWGSHSNN 340 (450)
T ss_dssp HHHHHHHTTCCCBCCCCS
T ss_pred HHHHHHHcCCEEEecCCc
Confidence 889999999998766554
No 138
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=65.53 E-value=63 Score=28.38 Aligned_cols=150 Identities=7% Similarity=0.030 Sum_probs=87.4
Q ss_pred CHHHHHHHHHHHHHCCCCcccccc---------CC--CCC------c--H------HHHHHHHHhcCCCCCEEEEeccCc
Q 024050 39 SEEDGISMIKHAFSKGITFFDTAD---------VY--GQN------A--N------EVLLGKALKQLPREKIQVATKFGI 93 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~---------~Y--g~g------~--s------e~~lg~~l~~~~r~~~~i~tK~~~ 93 (273)
+.++..+..+.+++.|++.|=.-- .| |.+ . . ....=+++++.-.+++-|......
T Consensus 143 ~~e~~~~~a~~~~~~Gf~~iKlKv~~~~~~~~~~~~pG~~~~~~~~~~~~~~~~~~~~e~v~avR~avG~d~~l~vDaN~ 222 (409)
T 3go2_A 143 DLDGVKRTAEEARERQFRAIKTNIFIHDDGPLHAWRPGFAVPFQPALNVDRKVLRNLRAHLEALRDGAGPDVEILLDLNF 222 (409)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEECCEECSSSSCEECBGGGTBSCCTTCCCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccccccccccccCCCccCCcccccchHHHHHHHHHHHHHHHHhCCCCEEEEECCC
Confidence 678888999999999998653211 01 100 0 0 011223444411234444444321
Q ss_pred CCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEE-ecCCCCHHHHHHH
Q 024050 94 AGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPGTIRRA 172 (273)
Q Consensus 94 ~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~i-GvS~~~~~~l~~~ 172 (273)
.++.+...+- -+.|+.+++++|. .|. ..++.+.++++.-.|-=. |=|-++++.++++
T Consensus 223 ----------~~~~~~A~~~-~~~L~~~~i~~iE-----~P~------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~ 280 (409)
T 3go2_A 223 ----------NAKPEGYLKI-LRELADFDLFWVE-----IDS------YSPQGLAYVRNHSPHPISSCETLFGIREFKPF 280 (409)
T ss_dssp ----------CSCHHHHHHH-HHHTTTSCCSEEE-----CCC------SCHHHHHHHHHTCSSCEEECTTCCHHHHHHHH
T ss_pred ----------CCCHHHHHHH-HHHHhhcCCeEEE-----eCc------CCHHHHHHHHhhCCCCEEeCCCcCCHHHHHHH
Confidence 1344433332 2345555555554 442 145667888877655432 3345678889999
Q ss_pred hhcCCceEEeeeccccccccc-ccHHHHHHHhCCeEEecc
Q 024050 173 HAVHPITAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYS 211 (273)
Q Consensus 173 ~~~~~~~~~q~~~~l~~~~~~-~~l~~~~~~~gi~v~a~s 211 (273)
++....+++|+..+- ---.+ ..+...|+++|+.++...
T Consensus 281 i~~~~~d~v~~k~~~-GGit~~~~ia~~A~~~gi~~~~h~ 319 (409)
T 3go2_A 281 FDANAVDVAIVDTIW-NGVWQSMKIAAFADAHDINVAPHN 319 (409)
T ss_dssp HHTTCCSEEEECHHH-HCHHHHHHHHHHHHHTTCEEEECC
T ss_pred HHhCCCCEEEeCCCC-CCHHHHHHHHHHHHHcCCEEeecC
Confidence 998889999998765 21111 678999999999998643
No 139
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=65.37 E-value=55 Score=27.11 Aligned_cols=103 Identities=14% Similarity=0.154 Sum_probs=66.5
Q ss_pred CHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHc-CCccEEecCCCCHHHHHHHhhc--CCceEEe
Q 024050 106 APDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEE-GKIKYIGLSEASPGTIRRAHAV--HPITAVQ 182 (273)
Q Consensus 106 ~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~-G~ir~iGvS~~~~~~l~~~~~~--~~~~~~q 182 (273)
+.+.+.+..++.. .-|-|.||+-.--. .....+.....++.+++. +. -|.|-+++++.++++++. ....++
T Consensus 32 ~~~~a~~~a~~~v-~~GAdiIDIg~~s~--~~eE~~rv~~vi~~l~~~~~~--pisIDT~~~~v~~aal~a~~Ga~iIN- 105 (271)
T 2yci_X 32 DPRPIQEWARRQA-EKGAHYLDVNTGPT--ADDPVRVMEWLVKTIQEVVDL--PCCLDSTNPDAIEAGLKVHRGHAMIN- 105 (271)
T ss_dssp CCHHHHHHHHHHH-HTTCSEEEEECCSC--SSCHHHHHHHHHHHHHHHCCC--CEEEECSCHHHHHHHHHHCCSCCEEE-
T ss_pred CHHHHHHHHHHHH-HCCCCEEEEcCCcC--chhHHHHHHHHHHHHHHhCCC--eEEEeCCCHHHHHHHHHhCCCCCEEE-
Confidence 3455555555554 57888888876542 223355566666666665 33 377788899999999988 444333
Q ss_pred eecccccccccccHHHHHHHhCCeEEecccCCCc
Q 024050 183 MEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 183 ~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G 216 (273)
..|....+. .++++.++++|..++.+..-.+|
T Consensus 106 -dvs~~~d~~-~~~~~~~a~~~~~vv~m~~d~~G 137 (271)
T 2yci_X 106 -STSADQWKM-DIFFPMAKKYEAAIIGLTMNEKG 137 (271)
T ss_dssp -EECSCHHHH-HHHHHHHHHHTCEEEEESCBTTB
T ss_pred -ECCCCcccc-HHHHHHHHHcCCCEEEEecCCCC
Confidence 334432111 57899999999999998653344
No 140
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=65.30 E-value=56 Score=26.80 Aligned_cols=158 Identities=13% Similarity=-0.009 Sum_probs=87.9
Q ss_pred CCHHHHHHHHHHHHHCCCCccccccCCCCC----cHHHHHHH--HHhcC---CCCCEEEEeccCcCCCCCccccccCCHH
Q 024050 38 VSEEDGISMIKHAFSKGITFFDTADVYGQN----ANEVLLGK--ALKQL---PREKIQVATKFGIAGIGVAGVIVKGAPD 108 (273)
Q Consensus 38 ~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g----~se~~lg~--~l~~~---~r~~~~i~tK~~~~~~~~~~~~~~~~~~ 108 (273)
.+.+++.++++.|.+.|+..|=.++++..+ ..|.+... .+++. ...++.| ..|. +.+..++
T Consensus 17 ~~~~~sl~~~~~a~~~G~~~i~~T~H~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~i~I--~~G~--------Ev~~~~~ 86 (262)
T 3qy7_A 17 GDSADSIEMARAAVRQGIRTIIATPHHNNGVYKNEPAAVREAADQLNKRLIKEDIPLHV--LPGQ--------EIRIYGE 86 (262)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEECCCBSEETTEECCHHHHHHHHHHHHHHHHHTTCCCEE--ECCC--------EEECCTT
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCEE--ecCe--------EEecchh
Confidence 368999999999999999999888887422 22332221 12211 1122222 2221 1223332
Q ss_pred HHHHHHHH-HHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCC------CCHHHHHHHhhcCCceEE
Q 024050 109 YVRSCCEA-SLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE------ASPGTIRRAHAVHPITAV 181 (273)
Q Consensus 109 ~i~~~~~~-sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~------~~~~~l~~~~~~~~~~~~ 181 (273)
. .+.+++ ++-.| +--|.+++..|... ......+.+.++++.|.+--||=-. ...+.+.++.+.. ..+
T Consensus 87 ~-~~~l~~~~~~~l--~~~~~vl~e~~~~~-~~~~~~~~l~~i~~~g~v~ILAHPeRy~~~~~~~~~l~~l~~~G--~~i 160 (262)
T 3qy7_A 87 V-EQDLAKRQLLSL--NDTKYILIEFPFDH-VPRYAEQLFYDLQLKGYIPVIAHPERNREIRENPSLLYHLVEKG--AAS 160 (262)
T ss_dssp H-HHHHHTTCSCCG--GGSSEEEEECCTTC-CCTTHHHHHHHHHHTTCEEEEECGGGCHHHHHCTHHHHHHHHTT--CEE
T ss_pred H-HHHHhcCCCcEE--CCceEEEEeCCCcc-CHHHHHHHHHHHHHCCCcEEEECCCccccccccHHHHHHHHHCC--CEE
Confidence 2 222332 22222 22355677655433 2356788889999999987776432 1234566666655 356
Q ss_pred eeeccccccc---ccccHHHHHHHhCCeEEecc
Q 024050 182 QMEWSLWTRD---IEEEIIPLCRELGIGIVPYS 211 (273)
Q Consensus 182 q~~~~l~~~~---~~~~l~~~~~~~gi~v~a~s 211 (273)
|+..+.+... ........|.++|+.++.-|
T Consensus 161 EiN~~s~~g~~g~~~~~~~~~~~~~gl~~~igS 193 (262)
T 3qy7_A 161 QITSGSLAGIFGKQLKAFSLRLVEANLIHFVAS 193 (262)
T ss_dssp EEEHHHHHTTTCHHHHHHHHHHHHTTCCCEEEC
T ss_pred EEECCccCcccchHHHHHHHHHHhCCCeEEEEc
Confidence 7766555321 12556777778888776544
No 141
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=65.17 E-value=22 Score=28.01 Aligned_cols=154 Identities=14% Similarity=0.074 Sum_probs=48.5
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.+++.+.++.|++.|+...|.-...-. ..-..+|+-.. +.++++.--. ...+.+++.++...
T Consensus 15 d~~~~~~~~~~al~~g~~~~~i~~~~l~-p~m~~vG~~w~---~g~~~~~~~~-------------~~~~~~~~~l~~l~ 77 (210)
T 1y80_A 15 DEAQVVELTRSLLSGGAEPLEVINKGLI-AGMDRVGVLFK---NNEMFVPEVL-------------MSANAMNAGVEVVK 77 (210)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CHHHHHHHHHHHHHcCCCHHHHHHHHHH-HHHHHHHHHHc---CCceeHHHHH-------------HHHHHHHHHHHHHH
Confidence 6788999999999998766554332210 12233443332 3333332211 11122222222222
Q ss_pred HHcCC---CcccEEEecCCCCCCCHHHHHHHHHHHHHcCC-ccEEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-
Q 024050 119 KRLDV---DYIDLYYQHRVDTSVPIEETIGEMKKLVEEGK-IKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE- 193 (273)
Q Consensus 119 ~~L~~---d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~-ir~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~- 193 (273)
.++.. ..---+++..+..+...-...=.-.-|...|. |.++|. +.+++.+.+......++++-+....-.....
T Consensus 78 ~~~~~~~~~~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~-~vp~~~l~~~~~~~~~d~v~lS~~~~~~~~~~ 156 (210)
T 1y80_A 78 QSQQAFDMPSVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGV-DIEPGKFVEAVKKYQPDIVGMSALLTTTMMNM 156 (210)
T ss_dssp -------CCCCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCS-SBCHHHHHHHHHHHCCSEEEEECCSGGGTHHH
T ss_pred HHhccccCCCCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCC-CCCHHHHHHHHHHcCCCEEEEeccccccHHHH
Confidence 22221 11113444455444433333333345567785 777886 5677777777666566666665544332211
Q ss_pred ccHHHHHHHhC----CeEEec
Q 024050 194 EEIIPLCRELG----IGIVPY 210 (273)
Q Consensus 194 ~~l~~~~~~~g----i~v~a~ 210 (273)
.++++.+++.| +.|+.-
T Consensus 157 ~~~i~~l~~~~~~~~~~v~vG 177 (210)
T 1y80_A 157 KSTIDALIAAGLRDRVKVIVG 177 (210)
T ss_dssp HHHHHHHHHTTCGGGCEEEEE
T ss_pred HHHHHHHHhcCCCCCCeEEEE
Confidence 67888888876 666654
No 142
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=63.32 E-value=62 Score=26.61 Aligned_cols=100 Identities=12% Similarity=0.064 Sum_probs=61.4
Q ss_pred CHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhc--CCceEEee
Q 024050 106 APDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV--HPITAVQM 183 (273)
Q Consensus 106 ~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~--~~~~~~q~ 183 (273)
+.+.+.+..++.. .-|-|.||+-. .+ ...+.++.++.+...+++-.=--|.|-+++++.++++++. ... +-+
T Consensus 23 ~~~~a~~~a~~~v-~~GAdiIDIg~--g~-~~v~~~ee~~rvv~~i~~~~~~pisIDT~~~~v~~aAl~a~~Ga~--iIN 96 (262)
T 1f6y_A 23 DPAPVQEWARRQE-EGGARALDLNV--GP-AVQDKVSAMEWLVEVTQEVSNLTLCLDSTNIKAIEAGLKKCKNRA--MIN 96 (262)
T ss_dssp CHHHHHHHHHHHH-HHTCSEEEEBC--C-----CHHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHCSSCE--EEE
T ss_pred CHHHHHHHHHHHH-HCCCcEEEECC--CC-CCCChHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHhhCCCCC--EEE
Confidence 4555666555554 57889999876 11 1233445554444444442112477778999999999987 443 333
Q ss_pred ecccccccccccHHHHHHHhCCeEEeccc
Q 024050 184 EWSLWTRDIEEEIIPLCRELGIGIVPYSP 212 (273)
Q Consensus 184 ~~~l~~~~~~~~l~~~~~~~gi~v~a~sp 212 (273)
..|... +...++++.++++|..++.+..
T Consensus 97 dvs~~~-d~~~~~~~~~a~~~~~vvlmh~ 124 (262)
T 1f6y_A 97 STNAER-EKVEKLFPLAVEHGAALIGLTM 124 (262)
T ss_dssp EECSCH-HHHHHHHHHHHHTTCEEEEESC
T ss_pred ECCCCc-ccHHHHHHHHHHhCCcEEEEcC
Confidence 444442 2114799999999999999864
No 143
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=63.10 E-value=75 Score=27.53 Aligned_cols=151 Identities=13% Similarity=0.047 Sum_probs=90.0
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc-CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
+.++..+.+..+++.|++.|-.-- |+....+.+ +++++ . .++.|..-... .++.+.. +.
T Consensus 161 ~~~~~~~~a~~~~~~G~~~~KiKv--g~~~d~~~v-~avr~a~--~~~~l~vDaN~----------~~~~~~a-----~~ 220 (386)
T 1wue_A 161 DLPQLLKQVQLAVEKGYQRVKLKI--RPGYDVEPV-ALIRQHF--PNLPLMVDANS----------AYTLADL-----PQ 220 (386)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEEC--BTTBSHHHH-HHHHHHC--TTSCEEEECTT----------CCCGGGH-----HH
T ss_pred CHHHHHHHHHHHHHhhhheEEEee--CcHHHHHHH-HHHHHhC--CCCeEEEeCCC----------CCCHHHH-----HH
Confidence 467777888888899998764311 122233444 45554 4 23333333211 1233333 22
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-cc
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EE 195 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~ 195 (273)
+++|. ..++.++..|-...+ ++.+.+|.++-.+- ..|=|.++...+.++++....+++|+..+-.---.+ ..
T Consensus 221 ~~~l~--~~~i~~iEqP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~ik~~~~GGit~~~~ 294 (386)
T 1wue_A 221 LQRLD--HYQLAMIEQPFAADD----FLDHAQLQRELKTRICLDENIRSLKDCQVALALGSCRSINLKIPRVGGIHEALK 294 (386)
T ss_dssp HHGGG--GSCCSCEECCSCTTC----SHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHH
T ss_pred HHHHH--hCCCeEEeCCCCccc----HHHHHHHHHhcCCCEEeCCccCCHHHHHHHHHcCCCCEEEEchhhhCCHHHHHH
Confidence 34442 246667777754333 45666776654432 334455788899999988888899987766432111 67
Q ss_pred HHHHHHHhCCeEEecccCCC
Q 024050 196 IIPLCRELGIGIVPYSPLGR 215 (273)
Q Consensus 196 l~~~~~~~gi~v~a~spl~~ 215 (273)
+...|+++|+.++..+.+..
T Consensus 295 i~~~A~~~gi~~~~~~~~es 314 (386)
T 1wue_A 295 IAAFCQENDLLVWLGGMFES 314 (386)
T ss_dssp HHHHHHHTTCEEEECCCCCC
T ss_pred HHHHHHHCCCeEEECCCccc
Confidence 89999999999988766544
No 144
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=62.44 E-value=70 Score=26.95 Aligned_cols=99 Identities=12% Similarity=0.012 Sum_probs=61.8
Q ss_pred CHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHH-----cCCccEEecCCCCHHHHHHHhhc--CCc
Q 024050 106 APDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVE-----EGKIKYIGLSEASPGTIRRAHAV--HPI 178 (273)
Q Consensus 106 ~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~-----~G~ir~iGvS~~~~~~l~~~~~~--~~~ 178 (273)
+.+.+.+..++.. .-|-|.||+-. . ....+.++.++.+..+++ .+. -|-|-++.++.++++++. ...
T Consensus 35 ~~~~a~~~A~~~v-~~GAdiIDIg~--g-~~~v~~~eem~rvv~~i~~~~~~~~v--pisIDT~~~~V~eaaL~~~~Ga~ 108 (300)
T 3k13_A 35 KYDEALSIARQQV-EDGALVIDVNM--D-DGLLDARTEMTTFLNLIMSEPEIARV--PVMIDSSKWEVIEAGLKCLQGKS 108 (300)
T ss_dssp CHHHHHHHHHHHH-HTTCSEEEEEC--C-CTTSCHHHHHHHHHHHHHTCHHHHTS--CEEEECSCHHHHHHHHHHCSSCC
T ss_pred CHHHHHHHHHHHH-HCCCCEEEECC--C-CCCCCHHHHHHHHHHHHHHhhhcCCC--eEEEeCCCHHHHHHHHHhcCCCC
Confidence 4555555555544 47889999987 1 222344454544444443 222 377778999999999984 443
Q ss_pred eEEeeeccccccccc-ccHHHHHHHhCCeEEeccc
Q 024050 179 TAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSP 212 (273)
Q Consensus 179 ~~~q~~~~l~~~~~~-~~l~~~~~~~gi~v~a~sp 212 (273)
.+ +..|....+.. .++++.++++|..|+.+.-
T Consensus 109 iI--NdIs~~~~d~~~~~~~~l~a~~ga~vV~mh~ 141 (300)
T 3k13_A 109 IV--NSISLKEGEEVFLEHARIIKQYGAATVVMAF 141 (300)
T ss_dssp EE--EEECSTTCHHHHHHHHHHHHHHTCEEEEESE
T ss_pred EE--EeCCcccCChhHHHHHHHHHHhCCeEEEEee
Confidence 33 44455432211 4789999999999998754
No 145
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=61.70 E-value=61 Score=26.01 Aligned_cols=156 Identities=14% Similarity=0.153 Sum_probs=80.6
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCC----cHHHHHHH--HHhc-C--CCCCEEEEeccCcCCCCCccccccCCHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQN----ANEVLLGK--ALKQ-L--PREKIQVATKFGIAGIGVAGVIVKGAPDY 109 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g----~se~~lg~--~l~~-~--~r~~~~i~tK~~~~~~~~~~~~~~~~~~~ 109 (273)
+.+++.++++.|.+.|++.|=.++++..+ ..+.+... .++. . ...++ .-+.|. +.++.+.
T Consensus 22 ~~e~~~e~i~~A~~~Gi~~i~~TdH~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i--~i~~G~--------E~~~~~~- 90 (247)
T 2wje_A 22 SREESKALLAESYRQGVRTIVSTSHRRKGMFETPEEKIAENFLQVREIAKEVASDL--VIAYGA--------EIYYTPD- 90 (247)
T ss_dssp SHHHHHHHHHHHHHTTEEEEECCCEEBTTTBCCCHHHHHHHHHHHHHHHHHHCTTC--EEECCC--------EEECCTH-
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCc--EEEEee--------EEeecHH-
Confidence 56889999999999999877666665421 12221111 1111 1 11122 222221 1223332
Q ss_pred HHHHHHHH-HHHc-CCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecC------CCCHHHHHHHhhcCCceEE
Q 024050 110 VRSCCEAS-LKRL-DVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS------EASPGTIRRAHAVHPITAV 181 (273)
Q Consensus 110 i~~~~~~s-L~~L-~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS------~~~~~~l~~~~~~~~~~~~ 181 (273)
+.+.+++. +..+ |. |.+++..+. ........+++..+++.|.+--||=- ....+.++++.+... .+
T Consensus 91 ~~~~l~~~~~~~l~gs---~~vl~e~~~-~~~~~~~~~~i~~i~~~g~~~vlaHp~r~~~~~~~~~~l~~l~~~G~--~l 164 (247)
T 2wje_A 91 VLDKLEKKRIPTLNDS---RYALIEFSM-NTPYRDIHSALSKILMLGITPVIAHIERYDALENNEKRVRELIDMGC--YT 164 (247)
T ss_dssp HHHHHHTTCSCCGGGS---SEEEEECCT-TCCHHHHHHHHHHHHTTTCEEEETTGGGCGGGTTCHHHHHHHHHTTC--EE
T ss_pred HHHHHhcCCccEECCC---eEEEEeCCC-CcchHHHHHHHHHHHHCCCcEEEEehhhHHHHhhCHHHHHHHHHCCC--EE
Confidence 33333321 1112 22 444444443 33456677899999999986544421 123455666666543 26
Q ss_pred eeecccc--cc------cccccHHHHHHHhCCeEEecc
Q 024050 182 QMEWSLW--TR------DIEEEIIPLCRELGIGIVPYS 211 (273)
Q Consensus 182 q~~~~l~--~~------~~~~~l~~~~~~~gi~v~a~s 211 (273)
|+..+-+ .. .....+...|.+.|+.++.-|
T Consensus 165 EiN~~s~~~~~~~g~~~~~~~~~~~~~~~~gl~~~~GS 202 (247)
T 2wje_A 165 QVNSSHVLKPKLFGERYKFMKKRAQYFLEQDLVHVIAS 202 (247)
T ss_dssp EEEHHHHSCCCSSCCSCHHHHHHHHHHHHTTCCSEEEC
T ss_pred EEecHhhHhcCCCCCcChHHHHHHHHHHHCCCeEEEEe
Confidence 6655444 21 111567788889888876543
No 146
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=61.18 E-value=26 Score=27.69 Aligned_cols=70 Identities=9% Similarity=0.090 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHcCCCcccEEEecCCCCC-CCHHHHHHHHHHHHHcCCccEEecC-CCCHHHHHHHhhcCCceEEeee
Q 024050 107 PDYVRSCCEASLKRLDVDYIDLYYQHRVDTS-VPIEETIGEMKKLVEEGKIKYIGLS-EASPGTIRRAHAVHPITAVQME 184 (273)
Q Consensus 107 ~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~-~~~~~~~~~L~~l~~~G~ir~iGvS-~~~~~~l~~~~~~~~~~~~q~~ 184 (273)
++.++.. ..+|.||+-+.+. -+++. ... +....|.+.. ...+..+||- |.+++.+.++.+...++.+|++
T Consensus 11 ~eda~~a-----~~~GaD~iGfif~-~~SpR~V~~-~~a~~i~~~~-~~~~~~VgVfvn~~~~~i~~~~~~~~ld~vQLH 82 (203)
T 1v5x_A 11 LEDALLA-----EALGAFALGFVLA-PGSRRRIAP-EAARAIGEAL-GPFVVRVGVFRDQPPEEVLRLMEEARLQVAQLH 82 (203)
T ss_dssp HHHHHHH-----HHHTCSEEEEECC-TTCTTBCCH-HHHHHHHHHS-CSSSEEEEEESSCCHHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHH-----HHcCCCEEEEEec-CCCCCcCCH-HHHHHHHHhC-CCCCCEEEEEeCCCHHHHHHHHHhhCCCEEEEC
Confidence 4455444 3589999999853 22222 223 3333333222 2468899996 5688899999888899999996
No 147
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=61.01 E-value=20 Score=30.39 Aligned_cols=103 Identities=14% Similarity=0.098 Sum_probs=60.7
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcCCceEEeee
Q 024050 105 GAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQME 184 (273)
Q Consensus 105 ~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~q~~ 184 (273)
++.+. +..+-+.|.++|+++|.+-...+|.......+.++.+..+.+...++..++. -+...++.+.+.. ++.+.+.
T Consensus 25 ~~~e~-k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~a~~~g-~~~v~i~ 101 (307)
T 1ydo_A 25 IATED-KITWINQLSRTGLSYIEITSFVHPKWIPALRDAIDVAKGIDREKGVTYAALV-PNQRGLENALEGG-INEACVF 101 (307)
T ss_dssp CCHHH-HHHHHHHHHTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCTTCEEEEEC-CSHHHHHHHHHHT-CSEEEEE
T ss_pred CCHHH-HHHHHHHHHHcCCCEEEECCCcCcccccccCCHHHHHHHhhhcCCCeEEEEe-CCHHhHHHHHhCC-cCEEEEE
Confidence 44443 5566677899999999998876654221122333444445444566666666 3566788777653 2233332
Q ss_pred cccccc--------c-c-----cccHHHHHHHhCCeEEec
Q 024050 185 WSLWTR--------D-I-----EEEIIPLCRELGIGIVPY 210 (273)
Q Consensus 185 ~~l~~~--------~-~-----~~~l~~~~~~~gi~v~a~ 210 (273)
.+.-+. . . -.+.+++++++|+.|.++
T Consensus 102 ~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~ 141 (307)
T 1ydo_A 102 MSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAY 141 (307)
T ss_dssp EESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred eecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 222110 0 0 156899999999998754
No 148
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=59.73 E-value=29 Score=30.29 Aligned_cols=150 Identities=16% Similarity=0.144 Sum_probs=83.6
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHH---HHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVL---LGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCE 115 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~---lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~ 115 (273)
..++..+-|+.|.+.|++.+=|+=+-..+..+.. +.+.++......+.|.. +.+|+
T Consensus 15 ~~~~~~~yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~--------------DIsp~------- 73 (372)
T 2p0o_A 15 ITNDTIIYIKKMKALGFDGIFTSLHIPEDDTSLYRQRLTDLGAIAKAEKMKIMV--------------DISGE------- 73 (372)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEEEECCC-----CHHHHHHHHHHHHHHHTCEEEE--------------EECHH-------
T ss_pred CHHHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEEE--------------ECCHH-------
Confidence 4667779999999999999988877654333222 22222211122333333 23333
Q ss_pred HHHHHcCCCcccEEEecCCC-------CCCCHHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcC-CceEEeeeccc
Q 024050 116 ASLKRLDVDYIDLYYQHRVD-------TSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVH-PITAVQMEWSL 187 (273)
Q Consensus 116 ~sL~~L~~d~iDl~~lh~~~-------~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~-~~~~~q~~~~l 187 (273)
+|++||.+|=|+-.+|... .....++ ..+|-.. .--.+=.|+.+.+.+..+++.. .+.-+..-+|.
T Consensus 74 -~l~~Lg~s~~dl~~~~~lGi~glRLD~Gf~~~e----ia~ls~n-lkIeLNASti~~~~l~~l~~~~~n~~~l~a~HNF 147 (372)
T 2p0o_A 74 -ALKRAGFSFDELEPLIELGVTGLRMDYGITIEQ----MAHASHK-IDIGLNASTITLEEVAELKAHQADFSRLEAWHNY 147 (372)
T ss_dssp -HHHTTTCBTTBCHHHHHHTCCEEEECSSCCHHH----HHHHHTT-SEEEEETTTCCHHHHHHHHHTTCCGGGEEEECCC
T ss_pred -HHHHcCCCHHHHHHHHHcCCCEEEEcCCCCHHH----HHHHhcC-CEEEEECccCCHHHHHHHHHcCCChHHeEEeecc
Confidence 3445666555554444332 1222222 2233333 3345666888899999988773 34445555566
Q ss_pred cccccc-------ccHHHHHHHhCCeEEecccCCC
Q 024050 188 WTRDIE-------EEIIPLCRELGIGIVPYSPLGR 215 (273)
Q Consensus 188 ~~~~~~-------~~l~~~~~~~gi~v~a~spl~~ 215 (273)
+-+... ...-++.+++|+.+.|+-|=..
T Consensus 148 YPr~~TGLs~~~f~~~n~~~k~~Gi~t~AFI~g~~ 182 (372)
T 2p0o_A 148 YPRPETGIGTTFFNEKNRWLKELGLQVFTFVPGDG 182 (372)
T ss_dssp CCSTTCSBCHHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCcEEEEecCCC
Confidence 555421 3345666788999999987763
No 149
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=59.67 E-value=85 Score=27.03 Aligned_cols=142 Identities=13% Similarity=0.129 Sum_probs=73.8
Q ss_pred CCCHHHHHHHHH-------HHHHCCCCcccccc-------------------CCCCCcHH---HHHHH---HHhcCCCCC
Q 024050 37 PVSEEDGISMIK-------HAFSKGITFFDTAD-------------------VYGQNANE---VLLGK---ALKQLPREK 84 (273)
Q Consensus 37 ~~~~~~~~~~l~-------~A~~~Gin~~DtA~-------------------~Yg~g~se---~~lg~---~l~~~~r~~ 84 (273)
.++.+|..++++ .|.++|+..++.-. .|| |.-| +++-+ ++++.-.++
T Consensus 147 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yG-GslenR~r~~~eiv~aVr~avg~d 225 (363)
T 3l5l_A 147 EMTLDDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYG-GSFDNRSRFLLETLAAVREVWPEN 225 (363)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTS-SSHHHHHHHHHHHHHHHHTTSCTT
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccC-cCHHHHHHHHHHHHHHHHHHcCCC
Confidence 356677666654 45678988766432 344 2223 12222 333322345
Q ss_pred EEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEec-CCCCC--CCHHHHHHHHHHHHHcCCccEEec
Q 024050 85 IQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQH-RVDTS--VPIEETIGEMKKLVEEGKIKYIGL 161 (273)
Q Consensus 85 ~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh-~~~~~--~~~~~~~~~L~~l~~~G~ir~iGv 161 (273)
+-|..|+.+.....+. ..+.+... .+-+.|+..|+|||++-.-. .+... ......++.+.++++.=.+--|++
T Consensus 226 ~pV~vRis~~~~~~~G---~~~~~~~~-~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~ 301 (363)
T 3l5l_A 226 LPLTARFGVLEYDGRD---EQTLEESI-ELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAKLPVTSA 301 (363)
T ss_dssp SCEEEEEEEECSSSCH---HHHHHHHH-HHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCCEEEC
T ss_pred ceEEEEecchhcCCCC---CCCHHHHH-HHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcCCcEEEe
Confidence 6677887754321110 01122222 34566788898888876521 11100 011112344445554445666777
Q ss_pred CCC-CHHHHHHHhhcCCceEEee
Q 024050 162 SEA-SPGTIRRAHAVHPITAVQM 183 (273)
Q Consensus 162 S~~-~~~~l~~~~~~~~~~~~q~ 183 (273)
... +++..+++++....+.+++
T Consensus 302 GgI~s~e~a~~~l~~G~aD~V~i 324 (363)
T 3l5l_A 302 WGFGTPQLAEAALQANQLDLVSV 324 (363)
T ss_dssp SSTTSHHHHHHHHHTTSCSEEEC
T ss_pred CCCCCHHHHHHHHHCCCccEEEe
Confidence 664 6888888888776666665
No 150
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A
Probab=58.14 E-value=46 Score=29.25 Aligned_cols=82 Identities=11% Similarity=-0.020 Sum_probs=57.5
Q ss_pred EecCCCCCCCHHHHHHHHHHHHHc-----CCc-cEEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-ccHHHHHHH
Q 024050 130 YQHRVDTSVPIEETIGEMKKLVEE-----GKI-KYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEIIPLCRE 202 (273)
Q Consensus 130 ~lh~~~~~~~~~~~~~~L~~l~~~-----G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l~~~~~~ 202 (273)
++..|-......+.++.+.+|.++ -.| -..|=|.++.+.+.++++....+++|+..+-.---.+ ..+...|++
T Consensus 271 ~iEqP~~~~~~~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~i~~~A~~ 350 (413)
T 1kcz_A 271 RIEGPMDVEDRQKQMEAMRDLRAELDGRGVDAELVADEWCNTVEDVKFFTDNKAGHMVQIKTPDLGGVNNIADAIMYCKA 350 (413)
T ss_dssp EEECSBCCSSHHHHHHHHHHHHHHHHHHTCCEEEEECTTCCSHHHHHHHHHTTCSSEEEECTGGGSSTHHHHHHHHHHHH
T ss_pred EEecCCCCCCCcccHHHHHHHHHhhhcCCCCCcEEeCCCcCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHH
Confidence 666664322245677888888776 232 2334455788899999988888999998776543212 678999999
Q ss_pred hCCeEEecc
Q 024050 203 LGIGIVPYS 211 (273)
Q Consensus 203 ~gi~v~a~s 211 (273)
+|+.++..+
T Consensus 351 ~gi~~~~~~ 359 (413)
T 1kcz_A 351 NGMGAYCGG 359 (413)
T ss_dssp TTCEEEECC
T ss_pred cCCEEEecC
Confidence 999999865
No 151
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=57.75 E-value=93 Score=26.85 Aligned_cols=69 Identities=12% Similarity=0.054 Sum_probs=44.9
Q ss_pred HHHHHHHHHcCCCcccEEEecCC-CCCCCHHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcCCceEEeee
Q 024050 112 SCCEASLKRLDVDYIDLYYQHRV-DTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQME 184 (273)
Q Consensus 112 ~~~~~sL~~L~~d~iDl~~lh~~-~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~q~~ 184 (273)
..+-+.|+..|+|||++-.-... ....+ ++.+.++++.=.+--|++..++++..+++++....+.+++-
T Consensus 253 ~~~a~~l~~~G~d~i~v~~~~~~~~~~~~----~~~~~~i~~~~~iPvi~~Ggi~~~~a~~~l~~g~aD~V~ig 322 (365)
T 2gou_A 253 TAAAALLNKHRIVYLHIAEVDWDDAPDTP----VSFKRALREAYQGVLIYAGRYNAEKAEQAINDGLADMIGFG 322 (365)
T ss_dssp HHHHHHHHHTTCSEEEEECCBTTBCCCCC----HHHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEECC
T ss_pred HHHHHHHHHcCCCEEEEeCCCcCCCCCcc----HHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHCCCcceehhc
Confidence 34556778889777776431110 11112 34556666665677788888889999999988777888773
No 152
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=57.40 E-value=57 Score=27.67 Aligned_cols=95 Identities=11% Similarity=0.056 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHcCCCcccEEEe-cCCCCC-CCHHHHHHHHHHHHHc-CCccEEec-CC----CCHHHHHHHhhcCC---c
Q 024050 110 VRSCCEASLKRLDVDYIDLYYQ-HRVDTS-VPIEETIGEMKKLVEE-GKIKYIGL-SE----ASPGTIRRAHAVHP---I 178 (273)
Q Consensus 110 i~~~~~~sL~~L~~d~iDl~~l-h~~~~~-~~~~~~~~~L~~l~~~-G~ir~iGv-S~----~~~~~l~~~~~~~~---~ 178 (273)
+.+..++.. ..|.|.||+-.- -+|+.. .+.++.++.++.+++. +.. |-| -+ ++++.++++++... +
T Consensus 76 ~~~~A~~~v-~~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v~~~~~vp--lsI~DT~~~~~~~~V~eaal~aga~~k~ 152 (310)
T 2h9a_B 76 PVAWAKKCV-EYGADIVALRLVSAHPDGQNRSGAELAEVCKAVADAIDVP--LMIIGCGVEEKDAEIFPVIGEALSGRNC 152 (310)
T ss_dssp HHHHHHHHH-HTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCSSC--EEEECCSCHHHHHHHHHHHHHHTTTSCC
T ss_pred HHHHHHHHH-HcCCcEEEEeCccCCCCCCCCCHHHHHHHHHHHHHhCCce--EEEECCCCCCCCHHHHHHHHHhCCCCCC
Confidence 333333433 789999998875 345432 5567777788888776 544 444 44 77889999888743 2
Q ss_pred eEEeeecccccccccccHHHHHHHhCCeEEeccc
Q 024050 179 TAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSP 212 (273)
Q Consensus 179 ~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~sp 212 (273)
-++-+ +.. + ..++++.|+++|..++.+.+
T Consensus 153 iINdv--s~~-~--~~~~~~~aa~~g~~vv~m~~ 181 (310)
T 2h9a_B 153 LLSSA--TKD-N--YKPIVATCMVHGHSVVASAP 181 (310)
T ss_dssp EEEEE--CTT-T--HHHHHHHHHHHTCEEEEECS
T ss_pred EEEEC--CCC-c--cHHHHHHHHHhCCCEEEECh
Confidence 33333 332 1 26789999999999999876
No 153
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=57.13 E-value=45 Score=28.09 Aligned_cols=99 Identities=13% Similarity=0.069 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHHHHcCCCcccEEEec-CCCC-CCCHHH----HHHHHHHHHHc-CCccEEecCCCCHHHHHHHhhcCCce
Q 024050 107 PDYVRSCCEASLKRLDVDYIDLYYQH-RVDT-SVPIEE----TIGEMKKLVEE-GKIKYIGLSEASPGTIRRAHAVHPIT 179 (273)
Q Consensus 107 ~~~i~~~~~~sL~~L~~d~iDl~~lh-~~~~-~~~~~~----~~~~L~~l~~~-G~ir~iGvS~~~~~~l~~~~~~~~~~ 179 (273)
.+.+.+..++.. .-|.|.||+-.-- +|.. ..+.+| +...++.+++. +. -|.|-+++++.++++++.....
T Consensus 62 ~~~a~~~a~~~v-~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~v--piSIDT~~~~V~~aAl~aGa~i 138 (297)
T 1tx2_A 62 VDAAVRHAKEMR-DEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVKL--PISIDTYKAEVAKQAIEAGAHI 138 (297)
T ss_dssp HHHHHHHHHHHH-HTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSCS--CEEEECSCHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHH-HcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCCc--eEEEeCCCHHHHHHHHHcCCCE
Confidence 344444444444 5678888887533 3432 123333 34444555554 43 3778889999999999886543
Q ss_pred EEeeecccccccccccHHHHHHHhCCeEEeccc
Q 024050 180 AVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSP 212 (273)
Q Consensus 180 ~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~sp 212 (273)
+ +..|.... ..++++.++++|..++.+..
T Consensus 139 I--Ndvsg~~~--d~~m~~~aa~~g~~vVlmh~ 167 (297)
T 1tx2_A 139 I--NDIWGAKA--EPKIAEVAAHYDVPIILMHN 167 (297)
T ss_dssp E--EETTTTSS--CTHHHHHHHHHTCCEEEECC
T ss_pred E--EECCCCCC--CHHHHHHHHHhCCcEEEEeC
Confidence 3 44444432 25789999999999998854
No 154
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=56.67 E-value=8.3 Score=33.95 Aligned_cols=162 Identities=12% Similarity=0.039 Sum_probs=85.2
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHH---HHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEV---LLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCE 115 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~---~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~ 115 (273)
..++..+-|+.|.+.|++.+=|+=+-..+..+. .+.+.++......+.|..=+.+.....-+ .+.+ --
T Consensus 39 ~~~~~~~Yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DVsp~~~~~Lg----~s~~-----dl 109 (385)
T 1x7f_A 39 TKEKDMAYISAAARHGFSRIFTCLLSVNRPKEEIVAEFKEIINHAKDNNMEVILDVAPAVFDQLG----ISYS-----DL 109 (385)
T ss_dssp CHHHHHHHHHHHHTTTEEEEEEEECCC--------HHHHHHHHHHHHTTCEEEEEECTTCC----------CC-----CT
T ss_pred CHHHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHcC----CCHH-----HH
Confidence 567788999999999999888886554332222 22222222233455555555443311000 0001 11
Q ss_pred HHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHc--CCccEEecCCCCHHHHHHHhhcC-CceEEeeecccccccc
Q 024050 116 ASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEE--GKIKYIGLSEASPGTIRRAHAVH-PITAVQMEWSLWTRDI 192 (273)
Q Consensus 116 ~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~--G~ir~iGvS~~~~~~l~~~~~~~-~~~~~q~~~~l~~~~~ 192 (273)
+.|+.||++.| =|.. .... +...+|-.. |.--.+=.|+ +.+.+..+++.. .+.-+..-+|.+-+..
T Consensus 110 ~~f~~lGi~gL---RLD~---Gf~~----~eia~ls~n~~glkIeLNASt-~~~~l~~l~~~~~n~~~l~acHNFYPr~~ 178 (385)
T 1x7f_A 110 SFFAELGADGI---RLDV---GFDG----LTEAKMTNNPYGLKIELNVSN-DIAYLENILSHQANKSALIGCHNFYPQKF 178 (385)
T ss_dssp HHHHHHTCSEE---EESS---CCSS----HHHHHHTTCTTCCEEEEETTS-CSSHHHHHTTSSCCGGGEEEECCCBCSTT
T ss_pred HHHHHcCCCEE---EEcC---CCCH----HHHHHHhcCCCCCEEEEeCcC-CHHHHHHHHHcCCChHHeEEeeccCCCCC
Confidence 24555665422 1211 1111 222334444 4555678888 888888888773 3444555556655542
Q ss_pred c-------ccHHHHHHHhCCeEEecccCCCccCCCC
Q 024050 193 E-------EEIIPLCRELGIGIVPYSPLGRGFFGGK 221 (273)
Q Consensus 193 ~-------~~l~~~~~~~gi~v~a~spl~~G~L~~~ 221 (273)
. ...-++.++.||.+.|+-|=-. .+.|+
T Consensus 179 TGLs~~~f~~~n~~~k~~Gi~t~AFI~g~~-~~rGP 213 (385)
T 1x7f_A 179 TGLPYDYFIRCSERFKKHGIRSAAFITSHV-ANIGP 213 (385)
T ss_dssp CSBCHHHHHHHHHHHHHTTCCCEEEECCSS-CCBCS
T ss_pred CCCCHHHHHHHHHHHHHCCCcEEEEecCCc-cccCC
Confidence 1 3345666788999999987663 33443
No 155
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=56.29 E-value=86 Score=27.88 Aligned_cols=97 Identities=10% Similarity=0.006 Sum_probs=67.7
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCC--CCHHHHHHHhhcCCceEEe
Q 024050 105 GAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE--ASPGTIRRAHAVHPITAVQ 182 (273)
Q Consensus 105 ~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~--~~~~~l~~~~~~~~~~~~q 182 (273)
++++...+.+.+.++.+ +++++..|-... -|+.+.+|.++..|-=.|=-. .+++.+.++++..-.+++|
T Consensus 273 ~t~~eai~~~~~~l~~y-----~i~~iEdPl~~d----D~~g~~~l~~~~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~ 343 (436)
T 2al1_A 273 LTGPQLADLYHSLMKRY-----PIVSIEDPFAED----DWEAWSHFFKTAGIQIVADDLTVTNPKRIATAIEKKAADALL 343 (436)
T ss_dssp BCHHHHHHHHHHHHHHS-----CEEEEECCSCTT----CHHHHHHHHTTCCSEEEESTTTTTCHHHHHHHHHTTCCSEEE
T ss_pred CCHHHHHHHHHHHHHhC-----CcEEEECCCCCc----CHHHHHHHHhcCCCeEEECCcccCCHHHHHHHHHhCCCCEEE
Confidence 35666666666666654 578888885533 367777888777765444333 3689999999988888899
Q ss_pred eeccccccccc-ccHHHHHHHhCCeEEec
Q 024050 183 MEWSLWTRDIE-EEIIPLCRELGIGIVPY 210 (273)
Q Consensus 183 ~~~~l~~~~~~-~~l~~~~~~~gi~v~a~ 210 (273)
+..|-.---.+ ..+...|+.+|+.++..
T Consensus 344 ikv~qiGGitea~~ia~lA~~~g~~~~~s 372 (436)
T 2al1_A 344 LKVNQIGTLSESIKAAQDSFAAGWGVMVS 372 (436)
T ss_dssp ECHHHHCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred echhhcCCHHHHHHHHHHHHHcCCeEEEe
Confidence 87765432222 67899999999997663
No 156
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=56.07 E-value=52 Score=28.09 Aligned_cols=96 Identities=10% Similarity=0.172 Sum_probs=61.1
Q ss_pred HHHHHHHHHHcCCCcccEEEe-cCCCC-CCCHHHHHHHHHHHHHcCCccEEecC-----CCCHHHHHHHhhcC---CceE
Q 024050 111 RSCCEASLKRLDVDYIDLYYQ-HRVDT-SVPIEETIGEMKKLVEEGKIKYIGLS-----EASPGTIRRAHAVH---PITA 180 (273)
Q Consensus 111 ~~~~~~sL~~L~~d~iDl~~l-h~~~~-~~~~~~~~~~L~~l~~~G~ir~iGvS-----~~~~~~l~~~~~~~---~~~~ 180 (273)
.+..++..+..|.|.||+-.- -+|+. ..+.++..+.++.+++.-.+ -|-|- +++++.++++++.. ...+
T Consensus 83 ~~~A~~~v~~~GAdiIDIg~eStrP~~~~vs~ee~~~~V~~v~~~~~v-PlsIDg~~~~T~~~eV~eaAleagag~~~lI 161 (323)
T 4djd_D 83 GRWAQKCVAEYGADLIYLKLDGADPEGANHSVDQCVATVKEVLQAVGV-PLVVVGCGDVEKDHEVLEAVAEAAAGENLLL 161 (323)
T ss_dssp HHHHHHHHHTTCCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCCS-CEEEECCSCHHHHHHHHHHHHHHTTTSCCEE
T ss_pred HHHHHHHHHHcCCCEEEEcCccCCCCCCCCCHHHHHHHHHHHHhhCCc-eEEEECCCCCCCCHHHHHHHHHhcCCCCCeE
Confidence 333333337889999998654 45543 24556666677777665222 24444 46788899988874 2344
Q ss_pred EeeecccccccccccHHHHHHHhCCeEEeccc
Q 024050 181 VQMEWSLWTRDIEEEIIPLCRELGIGIVPYSP 212 (273)
Q Consensus 181 ~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~sp 212 (273)
+-+... +. .++.+.|+++|..|+++.|
T Consensus 162 Nsv~~~----~~-~~m~~laa~~g~~vVlmh~ 188 (323)
T 4djd_D 162 GNAEQE----NY-KSLTAACMVHKHNIIARSP 188 (323)
T ss_dssp EEEBTT----BC-HHHHHHHHHHTCEEEEECS
T ss_pred EECCcc----cH-HHHHHHHHHhCCeEEEEcc
Confidence 433321 22 5789999999999999987
No 157
>2ptz_A Enolase; lyase, glycolysis,His-TAG; 1.65A {Trypanosoma brucei} SCOP: c.1.11.1 d.54.1.1 PDB: 2ptx_A 2pty_A* 2ptw_A 2pu0_A 2pu1_A* 1oep_A
Probab=55.89 E-value=1e+02 Score=27.26 Aligned_cols=96 Identities=11% Similarity=0.053 Sum_probs=65.2
Q ss_pred CHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcC--CccEEecCC--CCHHHHHHHhhcCCceEE
Q 024050 106 APDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEG--KIKYIGLSE--ASPGTIRRAHAVHPITAV 181 (273)
Q Consensus 106 ~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G--~ir~iGvS~--~~~~~l~~~~~~~~~~~~ 181 (273)
+...+.+.+.+.++.+ +++++..|-...+ |+.+.+|.++- .|-=+|=-. ++++.+.++++..-.+++
T Consensus 273 ~a~~~~~~~~~~l~~y-----~i~~iEdPl~~~D----~~g~~~l~~~~g~~ipI~gDe~~v~~~~~~~~~i~~~a~d~i 343 (432)
T 2ptz_A 273 TAEQLRETYCKWAHDY-----PIVSIEDPYDQDD----FAGFAGITEALKGKTQIVGDDLTVTNTERIKMAIEKKACNSL 343 (432)
T ss_dssp CHHHHHHHHHHHHHHS-----CEEEEECCSCTTC----HHHHHHHHHHTTTTSEEEESTTTTTCHHHHHHHHHTTCCSEE
T ss_pred CHHHHHHHHHHHHHhC-----CceEEECCCCcch----HHHHHHHHHhcCCCCeEEecCcccCCHHHHHHHHHcCCCCEE
Confidence 4555555555566654 5888888865443 66666676653 554344332 678889999998888899
Q ss_pred eeeccccccccc-ccHHHHHHHhCCeEEec
Q 024050 182 QMEWSLWTRDIE-EEIIPLCRELGIGIVPY 210 (273)
Q Consensus 182 q~~~~l~~~~~~-~~l~~~~~~~gi~v~a~ 210 (273)
|+..+-.---.+ ..+...|+++|+.++..
T Consensus 344 ~ik~~~~GGitea~~i~~lA~~~g~~v~~~ 373 (432)
T 2ptz_A 344 LLKINQIGTISEAIASSKLCMENGWSVMVS 373 (432)
T ss_dssp EECHHHHCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred EecccccCCHHHHHHHHHHHHHcCCeEEec
Confidence 987775432222 67899999999999753
No 158
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=55.88 E-value=76 Score=29.71 Aligned_cols=136 Identities=10% Similarity=0.049 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHCCCCccccc--c-----------------CCCCCcHH---HHHHHHH---hcCCCCCEEEEeccCcCCC
Q 024050 42 DGISMIKHAFSKGITFFDTA--D-----------------VYGQNANE---VLLGKAL---KQLPREKIQVATKFGIAGI 96 (273)
Q Consensus 42 ~~~~~l~~A~~~Gin~~DtA--~-----------------~Yg~g~se---~~lg~~l---~~~~r~~~~i~tK~~~~~~ 96 (273)
+..+.-+.|.++|+..++.- . .|| |.-| +++-+.+ ++.-.+++.|..|+.+...
T Consensus 142 ~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yG-gs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~ 220 (671)
T 1ps9_A 142 NFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWG-GDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDL 220 (671)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTS-SSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECC
T ss_pred HHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCC-CcHHHHHHHHHHHHHHHHHHcCCCceEEEEECcccc
Confidence 33444556678899888762 2 233 2222 2222222 2222346778888876442
Q ss_pred CCccccccCCHHHHHHHHHHHHHHcCCCcccEEEe-cCCC-C----CCCHHHHHHHHHHHHHcCCccEEecCCC-CHHHH
Q 024050 97 GVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQ-HRVD-T----SVPIEETIGEMKKLVEEGKIKYIGLSEA-SPGTI 169 (273)
Q Consensus 97 ~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~l-h~~~-~----~~~~~~~~~~L~~l~~~G~ir~iGvS~~-~~~~l 169 (273)
. ....+.+... .+-+.|+..|+|||++-.= +.+. + ..+....++.+.++++.=.+--|++... +++..
T Consensus 221 ~----~~g~~~~~~~-~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~iPvi~~Ggi~~~~~a 295 (671)
T 1ps9_A 221 V----EDGGTFAETV-ELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVTTNRINDPQVA 295 (671)
T ss_dssp S----TTCCCHHHHH-HHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCSSCEEECSSCCSHHHH
T ss_pred C----CCCCCHHHHH-HHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhcCceEEEeCCCCCHHHH
Confidence 1 1123444433 3456678899888876320 0110 0 0111123455556666555666666664 67777
Q ss_pred HHHhhcCCceEEee
Q 024050 170 RRAHAVHPITAVQM 183 (273)
Q Consensus 170 ~~~~~~~~~~~~q~ 183 (273)
+++++....+.+++
T Consensus 296 ~~~l~~g~aD~V~~ 309 (671)
T 1ps9_A 296 DDILSRGDADMVSM 309 (671)
T ss_dssp HHHHHTTSCSEEEE
T ss_pred HHHHHcCCCCEEEe
Confidence 77776655555554
No 159
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=55.85 E-value=50 Score=25.99 Aligned_cols=88 Identities=19% Similarity=0.162 Sum_probs=50.3
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcC---CceEEeeeccccccc---ccccHHHHHH
Q 024050 128 LYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVH---PITAVQMEWSLWTRD---IEEEIIPLCR 201 (273)
Q Consensus 128 l~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~---~~~~~q~~~~l~~~~---~~~~l~~~~~ 201 (273)
++++..|.. ..-+++++...+-.++.-|++|=|.+.+-+.-.++++.. .+.++-.++..-.+. ...+..+..+
T Consensus 17 ~~YF~~~G~-eNT~~tl~la~era~e~~Ik~iVVAS~sG~TA~k~~e~~~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L~ 95 (201)
T 1vp8_A 17 IVYFNKPGR-ENTEETLRLAVERAKELGIKHLVVASSYGDTAMKALEMAEGLEVVVVTYHTGFVREGENTMPPEVEEELR 95 (201)
T ss_dssp CEEESSCSG-GGHHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHHHCTTCEEEEEECCTTSSSTTCCSSCHHHHHHHH
T ss_pred EEEecCCCc-ccHHHHHHHHHHHHHHcCCCEEEEEeCCChHHHHHHHHhcCCeEEEEeCcCCCCCCCCCcCCHHHHHHHH
Confidence 344455543 223455544433333334899988887665555555442 344433333332221 2378999999
Q ss_pred HhCCeEEecccCCCc
Q 024050 202 ELGIGIVPYSPLGRG 216 (273)
Q Consensus 202 ~~gi~v~a~spl~~G 216 (273)
+.|+.|+..+=+..|
T Consensus 96 ~~G~~V~t~tH~lsg 110 (201)
T 1vp8_A 96 KRGAKIVRQSHILSG 110 (201)
T ss_dssp HTTCEEEECCCTTTT
T ss_pred hCCCEEEEEeccccc
Confidence 999999987655544
No 160
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=55.24 E-value=51 Score=26.02 Aligned_cols=88 Identities=16% Similarity=0.145 Sum_probs=54.2
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcC--CceEEeeeccccccc---ccccHHHHHHH
Q 024050 128 LYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVH--PITAVQMEWSLWTRD---IEEEIIPLCRE 202 (273)
Q Consensus 128 l~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~--~~~~~q~~~~l~~~~---~~~~l~~~~~~ 202 (273)
++++..|... .-+++++...+-.++.-|++|=|.+.+-+.-.++++.. .+.++-.++..-.+. ...+..+..++
T Consensus 25 i~YF~~~G~e-NT~~tl~la~era~e~~Ik~iVVASssG~TA~k~~e~~~~~lVvVTh~~GF~~pg~~e~~~e~~~~L~~ 103 (206)
T 1t57_A 25 ICYFEEPGKE-NTERVLELVGERADQLGIRNFVVASVSGETALRLSEMVEGNIVSVTHHAGFREKGQLELEDEARDALLE 103 (206)
T ss_dssp EEEESSCSGG-GHHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHTTCCSEEEEECCCTTSSSTTCCSSCHHHHHHHHH
T ss_pred EEEecCCCcc-cHHHHHHHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHccCCEEEEeCcCCCCCCCCCcCCHHHHHHHHh
Confidence 5666766543 24555544433333334899999887777666666654 444444344433221 23789999999
Q ss_pred hCCeEEecccCCCc
Q 024050 203 LGIGIVPYSPLGRG 216 (273)
Q Consensus 203 ~gi~v~a~spl~~G 216 (273)
.|+.|+..+=+..|
T Consensus 104 ~G~~V~t~tH~lsG 117 (206)
T 1t57_A 104 RGVNVYAGSHALSG 117 (206)
T ss_dssp HTCEEECCSCTTTT
T ss_pred CCCEEEEeeccccc
Confidence 99999976555444
No 161
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=54.65 E-value=33 Score=30.66 Aligned_cols=59 Identities=12% Similarity=0.241 Sum_probs=37.8
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEec-CCCCC----------C-CHHH---HH-HHHHHHHHcCCccEEecCCCC
Q 024050 105 GAPDYVRSCCEASLKRLDVDYIDLYYQH-RVDTS----------V-PIEE---TI-GEMKKLVEEGKIKYIGLSEAS 165 (273)
Q Consensus 105 ~~~~~i~~~~~~sL~~L~~d~iDl~~lh-~~~~~----------~-~~~~---~~-~~L~~l~~~G~ir~iGvS~~~ 165 (273)
.+.+.+.+.++... .|+.+++.++.+. .|... . +.++ .+ .+.+.|.+.| ...+++|||.
T Consensus 217 et~e~~~~tl~~~~-~l~~~~i~~y~l~~~p~t~~~~~~~~~~~lp~~~~~~~~~~~~~~~L~~~G-y~~yeis~fa 291 (457)
T 1olt_A 217 QTPESFAFTLKRVA-ELNPDRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSG-YQFIGMDHFA 291 (457)
T ss_dssp CCHHHHHHHHHHHH-HHCCSEEEEEECCCCTTTSGGGGGSCGGGSCCHHHHHHHHHHHHHHHHHTT-CEEEETTEEE
T ss_pred CCHHHHHHHHHHHH-hcCcCEEEeecCcCCcCchhHhhccccCCCcCHHHHHHHHHHHHHHHHHCC-CeEEEechhc
Confidence 45778888877654 6899999998875 33211 1 1122 23 3445666777 4789999974
No 162
>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis}
Probab=54.48 E-value=30 Score=31.32 Aligned_cols=116 Identities=17% Similarity=0.160 Sum_probs=78.0
Q ss_pred HHHHHHHCCCCcc--ccccCCC--------CCcHHHHHHHHHhc---CCCCCEEEEeccCcCCCCC---------ccccc
Q 024050 46 MIKHAFSKGITFF--DTADVYG--------QNANEVLLGKALKQ---LPREKIQVATKFGIAGIGV---------AGVIV 103 (273)
Q Consensus 46 ~l~~A~~~Gin~~--DtA~~Yg--------~g~se~~lg~~l~~---~~r~~~~i~tK~~~~~~~~---------~~~~~ 103 (273)
-++..-+.|+..+ =||..|- +|.-|.++..+-+. -.+..+|+++-++...-.. -....
T Consensus 113 ~f~~l~~~Gl~mYGQMTAGsw~YIG~QGIvqGTyeT~~~~~rk~~gg~L~G~~~lTaGLGGMgGAQplA~~mag~v~i~~ 192 (552)
T 2fkn_A 113 HFHELEKKGLMMYGQMTAGSWIYIGSQGILQGTYETFAELARQHFGGSLKGTLTLTAGLGGMGGAQPLSVTMNEGVVIAV 192 (552)
T ss_dssp HHHHHHHTTCCCBCTTTTTTTCCCTTHHHHHHHHHHHHHHHHHHSSSCCTTCEEEEECCSTTTTHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHcccccccCccccceeeecCcceeecHHHHHHHHHHHhcCCCCCceEEEEecCCccchhhHHHHHHcCceEEEE
Confidence 3445566787733 2444443 45566665533332 4578899999887543110 00122
Q ss_pred cCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhc
Q 024050 104 KGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV 175 (273)
Q Consensus 104 ~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~ 175 (273)
+.++..|++ |+.+.|+|.+. .++++.++...+.+++|+..+||+-..-++.++++.+.
T Consensus 193 Evd~~ri~~-------R~~~gyld~~~-------~~ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~l~~~ 250 (552)
T 2fkn_A 193 EVDEKRIDK-------RIETKYCDRKT-------ASIEEALAWAEEAKLAGKPLSIALLGNAAEVHHTLLNR 250 (552)
T ss_dssp ESCHHHHHH-------HHHTTSCSEEE-------SCHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHHHTT
T ss_pred EECHHHHHH-------HHhCCcceeEc-------CCHHHHHHHHHHHHHcCCceEEEEeccHHHHHHHHHHC
Confidence 445555554 56678999865 56899999999999999999999999888999998876
No 163
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=54.32 E-value=1.1e+02 Score=26.63 Aligned_cols=150 Identities=10% Similarity=0.038 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHCCCCccccccCCC---CC-cHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccC-CHHHHHHHHHH
Q 024050 42 DGISMIKHAFSKGITFFDTADVYG---QN-ANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKG-APDYVRSCCEA 116 (273)
Q Consensus 42 ~~~~~l~~A~~~Gin~~DtA~~Yg---~g-~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~-~~~~i~~~~~~ 116 (273)
+..+..+.+.+.|++.|=.- ..| .. ......=+++++.-.+++-|...... .+ +.+...+-+ +
T Consensus 160 ~~~~~a~~~~~~G~~~~K~~-k~g~~~~~~~~d~e~v~avR~a~G~d~~l~vDaN~----------~~~~~~~A~~~~-~ 227 (394)
T 3mkc_A 160 GYAPLLEKAKAHNIRAVKVC-VPIKADWSTKEVAYYLRELRGILGHDTDMMVDYLY----------RFTDWYEVARLL-N 227 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEE-CCTTCCCCHHHHHHHHHHHHHHHCSSSEEEEECTT----------CCCCHHHHHHHH-H
T ss_pred HHHHHHHHHHHcCCCEEEeC-ccCCCccCHHHHHHHHHHHHHHhCCCCeEEEeCCC----------CCCCHHHHHHHH-H
Confidence 55667888899999987651 112 11 11222233455411233334433221 13 444433322 3
Q ss_pred HHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-c
Q 024050 117 SLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-E 194 (273)
Q Consensus 117 sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~ 194 (273)
.|+.++++ +++.|-... .++.+.++++.-.|- ..|=+-++++.++++++....+++|+..+-.---.+ .
T Consensus 228 ~L~~~~i~-----~iEeP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~ 298 (394)
T 3mkc_A 228 SIEDLELY-----FAEATLQHD----DLSGHAKLVENTRSRICGAEMSTTRFEAEEWITKGKVHLLQSDYNRCGGLTELR 298 (394)
T ss_dssp HTGGGCCS-----EEESCSCTT----CHHHHHHHHHHCSSCBEECTTCCHHHHHHHHHHTTCCSEECCCTTTTTHHHHHH
T ss_pred HhhhcCCe-----EEECCCCch----hHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCeEecCccccCCHHHHH
Confidence 45555554 445554332 356777887765554 233345778889999988888999998776542111 6
Q ss_pred cHHHHHHHhCCeEEeccc
Q 024050 195 EIIPLCRELGIGIVPYSP 212 (273)
Q Consensus 195 ~l~~~~~~~gi~v~a~sp 212 (273)
.+...|+++|+.+...+.
T Consensus 299 ~ia~~A~~~gi~~~~h~~ 316 (394)
T 3mkc_A 299 RITEMATANNVQVMPHNW 316 (394)
T ss_dssp HHHHHHHHTTCEECCCCC
T ss_pred HHHHHHHHcCCEEeecCC
Confidence 789999999999987653
No 164
>1x87_A Urocanase protein; structural genomics, protein STR initiative, MCSG, PSI, midwest center for structural genomi; HET: MSE NAD; 2.40A {Geobacillus stearothermophilus} SCOP: e.51.1.1
Probab=54.04 E-value=31 Score=31.28 Aligned_cols=96 Identities=20% Similarity=0.260 Sum_probs=66.8
Q ss_pred CCcHHHHHHHHHhc---CCCCCEEEEeccCcCCCCC---------ccccccCCHHHHHHHHHHHHHHcCCCcccEEEecC
Q 024050 66 QNANEVLLGKALKQ---LPREKIQVATKFGIAGIGV---------AGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHR 133 (273)
Q Consensus 66 ~g~se~~lg~~l~~---~~r~~~~i~tK~~~~~~~~---------~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~ 133 (273)
+|.-|.++..+-+. -.+..+|+++-++...-.. -....+.++..|++ |+.+.|+|.+.
T Consensus 142 qGTyeT~~~~~rk~~gg~L~G~~~lTaGLGGMgGAQplA~~mag~v~i~~Evd~~ri~~-------R~~~gyld~~~--- 211 (551)
T 1x87_A 142 QGTYETFAEVARQHFGGTLAGTITLTAGLGGMGGAQPLAVTMNGGVCLAIEVDPARIQR-------RIDTNYLDTMT--- 211 (551)
T ss_dssp HHHHHHHHHHHHHHSTTCCTTCEEEEECCSTTGGGHHHHHHHTTCEEEEEESCHHHHHH-------HHHTTSCSEEE---
T ss_pred ecHHHHHHHHHHHhcCCCCCceEEEEecCCccchhhHHHHHHcCceEEEEEECHHHHHH-------HHhCCCceeEc---
Confidence 35556555533232 4577899999877543110 00122445555554 56678999865
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhc
Q 024050 134 VDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV 175 (273)
Q Consensus 134 ~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~ 175 (273)
.++++.++...+.+++|+..+||+-..-++.++++.+.
T Consensus 212 ----~~ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~l~~~ 249 (551)
T 1x87_A 212 ----DSLDAALEMAKQAKEEKKALSIGLVGNAAEVLPRLVET 249 (551)
T ss_dssp ----SCHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHHHHT
T ss_pred ----CCHHHHHHHHHHHHHcCCceEEEEeccHHHHHHHHHHC
Confidence 56899999999999999999999999888989998876
No 165
>2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural GENO NPPSFA; 1.85A {Methanocaldococcus jannaschii}
Probab=53.04 E-value=1.1e+02 Score=26.98 Aligned_cols=94 Identities=12% Similarity=0.077 Sum_probs=63.7
Q ss_pred CHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCC--C-CHHHHHHHhhcCCceEEe
Q 024050 106 APDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE--A-SPGTIRRAHAVHPITAVQ 182 (273)
Q Consensus 106 ~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~--~-~~~~l~~~~~~~~~~~~q 182 (273)
+++...+.+.+.|+.+ +++++..|-...+ ++.+.+|.++-.|- |..-. + +...+.++++....+++|
T Consensus 268 ~~~~ai~~~~~~l~~~-----~i~~iEeP~~~~d----~~~~~~l~~~~~ip-Ia~dE~~~~~~~~~~~~i~~~a~d~i~ 337 (427)
T 2pa6_A 268 TREELLDYYKALVDEY-----PIVSIEDPFHEED----FEGFAMITKELDIQ-IVGDDLFVTNVERLRKGIEMKAANALL 337 (427)
T ss_dssp CHHHHHHHHHHHHHHS-----CEEEEECCSCTTC----HHHHHHHHHHSSSE-EEESTTTTTCHHHHHHHHHHTCCSEEE
T ss_pred CHHHHHHHHHHHHhhC-----CCcEEEcCCChhh----HHHHHHHHhhCCCe-EEeCccccCCHHHHHHHHHhCCCCEEE
Confidence 5555555555566654 5788888865443 56677777765553 33322 3 478899998888888999
Q ss_pred eeccccccccc-ccHHHHHHHhCCeEEe
Q 024050 183 MEWSLWTRDIE-EEIIPLCRELGIGIVP 209 (273)
Q Consensus 183 ~~~~l~~~~~~-~~l~~~~~~~gi~v~a 209 (273)
+..+-.---.+ ..+...|+++|+.++.
T Consensus 338 ik~~~~GGitea~~ia~lA~~~g~~~~~ 365 (427)
T 2pa6_A 338 LKVNQIGTLSEAVDAAQLAFRNGYGVVV 365 (427)
T ss_dssp ECHHHHCSHHHHHHHHHHHHTTTCEEEE
T ss_pred EcccccCCHHHHHHHHHHHHHcCCeEEE
Confidence 87765432112 6789999999999876
No 166
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=52.77 E-value=1.1e+02 Score=26.42 Aligned_cols=69 Identities=14% Similarity=0.031 Sum_probs=44.9
Q ss_pred HHHHHHHHHcCCCcccEEEecCCCCCCCHH-HHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcCCceEEee
Q 024050 112 SCCEASLKRLDVDYIDLYYQHRVDTSVPIE-ETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQM 183 (273)
Q Consensus 112 ~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~-~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~q~ 183 (273)
..+-+.|+..|+|||++ |......... ..++.+.++++.=.+--|++..++++..+++++....+.+++
T Consensus 258 ~~la~~le~~Gvd~i~v---~~~~~~~~~~~~~~~~~~~ik~~~~iPvi~~Ggi~~~~a~~~l~~g~aD~V~i 327 (377)
T 2r14_A 258 FYLAGELDRRGLAYLHF---NEPDWIGGDITYPEGFREQMRQRFKGGLIYCGNYDAGRAQARLDDNTADAVAF 327 (377)
T ss_dssp HHHHHHHHHTTCSEEEE---ECCC------CCCTTHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHHcCCCEEEE---eCCcccCCCCcchHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCceEEee
Confidence 45567778889877776 4321100000 124556667766667778888888999999998877777776
No 167
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=52.37 E-value=27 Score=29.33 Aligned_cols=104 Identities=12% Similarity=-0.017 Sum_probs=58.2
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcCCceEEeee
Q 024050 105 GAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQME 184 (273)
Q Consensus 105 ~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~q~~ 184 (273)
++.+... .+-+.|.++|+++|.+-....|.....+.+.++.+..+.+...++..++. .+...++++.+.. ++.+.+.
T Consensus 24 ~~~e~k~-~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~a~~ag-~~~v~i~ 100 (298)
T 2cw6_A 24 VSTPVKI-KLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKFPGINYPVLT-PNLKGFEAAVAAG-AKEVVIF 100 (298)
T ss_dssp CCHHHHH-HHHHHHHHTTCSEECCEECCCTTTCGGGTTHHHHHHHSCCCTTCBCCEEC-CSHHHHHHHHHTT-CSEEEEE
T ss_pred CCHHHHH-HHHHHHHHcCcCEEEECCCcCcccccccCCHHHHHHHHhhCCCCEEEEEc-CCHHhHHHHHHCC-CCEEEEE
Confidence 4455444 66667889999999998766653211112223333344333233433433 4567788877763 3344443
Q ss_pred cccccc--------c------ccccHHHHHHHhCCeEEecc
Q 024050 185 WSLWTR--------D------IEEEIIPLCRELGIGIVPYS 211 (273)
Q Consensus 185 ~~l~~~--------~------~~~~l~~~~~~~gi~v~a~s 211 (273)
.+.-+. . .-.+.+++|+++|+.|.++-
T Consensus 101 ~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l 141 (298)
T 2cw6_A 101 GAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYV 141 (298)
T ss_dssp EESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred ecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 332221 0 01567999999999987543
No 168
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=51.66 E-value=13 Score=23.12 Aligned_cols=20 Identities=25% Similarity=0.358 Sum_probs=17.7
Q ss_pred CCHHHHHHHHHHHHHcCCcc
Q 024050 138 VPIEETIGEMKKLVEEGKIK 157 (273)
Q Consensus 138 ~~~~~~~~~L~~l~~~G~ir 157 (273)
.+.++++++|.+|.++|+|+
T Consensus 37 V~kdeV~~~LrrLe~KGLI~ 56 (59)
T 2xvc_A 37 VEKQEVVKLLEALKNKGLIA 56 (59)
T ss_dssp CCHHHHHHHHHHHHHTTSEE
T ss_pred CCHHHHHHHHHHHHHCCCee
Confidence 45688999999999999987
No 169
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=50.77 E-value=1e+02 Score=25.83 Aligned_cols=101 Identities=13% Similarity=0.131 Sum_probs=53.9
Q ss_pred CCHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 38 VSEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 38 ~~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
.+.++..+.++.+.+.|++.|--...-.+-..-+.+-+.++......+.|.+-.+. .+++.+ +.
T Consensus 84 ls~eei~~~i~~~~~~g~~~i~~~gGe~p~~~~~~~~~li~~i~~~~~~i~~s~g~-----------l~~e~l-----~~ 147 (348)
T 3iix_A 84 MTPEEIVERARLAVQFGAKTIVLQSGEDPYXMPDVISDIVKEIKKMGVAVTLSLGE-----------WPREYY-----EK 147 (348)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEESCCGGGTTHHHHHHHHHHHTTSCEEEEECCC-----------CCHHHH-----HH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEEeCCCCCccHHHHHHHHHHHHhcCceEEEecCC-----------CCHHHH-----HH
Confidence 57899999999999999886544321111112133444444422225656543221 233333 23
Q ss_pred HHHcCCCcccEEEecCCCC--------CCCHHHHHHHHHHHHHcCC
Q 024050 118 LKRLDVDYIDLYYQHRVDT--------SVPIEETIGEMKKLVEEGK 155 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~--------~~~~~~~~~~L~~l~~~G~ 155 (273)
|...|++.+- +-++..++ ....++.+++++.+++.|.
T Consensus 148 L~~ag~~~v~-i~let~~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi 192 (348)
T 3iix_A 148 WKEAGADRYL-LRHETANPVLHRKLRPDTSFENRLNCLLTLKELGY 192 (348)
T ss_dssp HHHHTCCEEE-CCCBCSCHHHHHHHSTTSCHHHHHHHHHHHHHTTC
T ss_pred HHHhCCCEEe-eeeeeCCHHHHHHhCCCcCHHHHHHHHHHHHHhCC
Confidence 4445655543 23333321 1246778888888888875
No 170
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=50.54 E-value=1.1e+02 Score=25.46 Aligned_cols=100 Identities=16% Similarity=0.075 Sum_probs=64.9
Q ss_pred CHHHHHHHHHHHHHHcCCCcccEEEec-CCC-----CCCCHHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcCCce
Q 024050 106 APDYVRSCCEASLKRLDVDYIDLYYQH-RVD-----TSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPIT 179 (273)
Q Consensus 106 ~~~~i~~~~~~sL~~L~~d~iDl~~lh-~~~-----~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~ 179 (273)
+.+.+.+..++ +-.-|-|.||+---- +|. ....+..+...++.+++.+. -|.|-+++++.++++++.....
T Consensus 27 ~~~~a~~~a~~-~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~~~--piSIDT~~~~va~aAl~aGa~i 103 (280)
T 1eye_A 27 DLDDAVKHGLA-MAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQGI--TVSIDTMRADVARAALQNGAQM 103 (280)
T ss_dssp SHHHHHHHHHH-HHHTTCSEEEEECC--------------HHHHHHHHHHHHHTTC--CEEEECSCHHHHHHHHHTTCCE
T ss_pred CHHHHHHHHHH-HHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcCCC--EEEEeCCCHHHHHHHHHcCCCE
Confidence 45666655543 334688999998522 232 22335566777777777643 3788899999999999986543
Q ss_pred EEeeecccccccccccHHHHHHHhCCeEEeccc
Q 024050 180 AVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSP 212 (273)
Q Consensus 180 ~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~sp 212 (273)
++ ..|-... ..++++.++++|..++.+..
T Consensus 104 IN--dvsg~~~--d~~m~~~~a~~~~~vVlmh~ 132 (280)
T 1eye_A 104 VN--DVSGGRA--DPAMGPLLAEADVPWVLMHW 132 (280)
T ss_dssp EE--ETTTTSS--CTTHHHHHHHHTCCEEEECC
T ss_pred EE--ECCCCCC--CHHHHHHHHHhCCeEEEEcC
Confidence 33 3343332 25799999999999999854
No 171
>1bxn_I Rubisco, protein (ribulose bisphosphate carboxylase small; lyase (carbon-carbon), lyase; 2.70A {Cupriavidus necator} SCOP: d.73.1.1
Probab=50.40 E-value=74 Score=23.53 Aligned_cols=85 Identities=9% Similarity=0.099 Sum_probs=57.4
Q ss_pred cceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCC-ccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCcc
Q 024050 22 KLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGIT-FFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAG 100 (273)
Q Consensus 22 ~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin-~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~ 100 (273)
+|-+||.++ =.++++++..+.|++++..|.+ .+.-++. ...|...+-+-|++...
T Consensus 2 ~~~~etfSy----LP~ltdeqI~kQI~YlL~qGw~p~lE~~d~---------------~~~r~~yW~mWkLPmF~----- 57 (139)
T 1bxn_I 2 RITQGTFSF----LPELTDEQITKQLEYCLNQGWAVGLEYTDD---------------PHPRNTYWEMFGLPMFD----- 57 (139)
T ss_dssp CCCCSBTTT----SSCCCHHHHHHHHHHHHHHTCEEEEEEESC---------------CCTTCCCCEESSSCBTT-----
T ss_pred ceecceecc----CCCCCHHHHHHHHHHHHHCCCeEEEEeccC---------------CccccCEEeecCCCCcC-----
Confidence 356777653 3356899999999999999976 2222211 14567777777765433
Q ss_pred ccccCCHHHHHHHHHHHHHHcCCCcccEEEecC
Q 024050 101 VIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHR 133 (273)
Q Consensus 101 ~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~ 133 (273)
..++..+...|++.++.---.||-|+-+.+
T Consensus 58 ---~td~~~Vl~Ele~C~k~~p~~YVRliGfD~ 87 (139)
T 1bxn_I 58 ---LRDAAGILMEINNARNTFPNHYIRVTAFDS 87 (139)
T ss_dssp ---CCCHHHHHHHHHHHHHHCSSSEEEEEEECT
T ss_pred ---CCCHHHHHHHHHHHHHHCCCCeEEEEEEeC
Confidence 346888999999999877766666655544
No 172
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=50.40 E-value=1.1e+02 Score=25.40 Aligned_cols=140 Identities=11% Similarity=-0.063 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHH
Q 024050 40 EEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLK 119 (273)
Q Consensus 40 ~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~ 119 (273)
.++..+.+..+++....+ ..+.+ -.-++.+.+.+. ...+++++++= -.+++...++
T Consensus 41 ~~~v~~a~~~~~~~~~~y--~~~~~--~~l~~~la~~~~-~~~~~i~~~~g-------------------~t~al~~~~~ 96 (361)
T 3ftb_A 41 PKSFLNNIDEGIKNLGVY--PDVNY--RRLNKSIENYLK-LKDIGIVLGNG-------------------ASEIIELSIS 96 (361)
T ss_dssp CHHHHTTHHHHHHGGGSC--CCTTC--HHHHHHHHHHHT-CCSCEEEEESS-------------------HHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhcCC--CCccH--HHHHHHHHHHhC-CCcceEEEcCC-------------------HHHHHHHHHH
Confidence 466777777777753222 11111 134455555554 44555555431 1345555555
Q ss_pred HcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecC---CCCHHHHHHHhhcCCceEEeeeccccccc----c
Q 024050 120 RLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS---EASPGTIRRAHAVHPITAVQMEWSLWTRD----I 192 (273)
Q Consensus 120 ~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS---~~~~~~l~~~~~~~~~~~~q~~~~l~~~~----~ 192 (273)
.+ |-+++..|... .....+... ..++..+-+. .++.+.++++++..+..++..+.|+.-.. .
T Consensus 97 ~~-----d~vi~~~~~~~----~~~~~~~~~--g~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~i~~p~nptG~~~~~~~ 165 (361)
T 3ftb_A 97 LF-----EKILIIVPSYA----EYEINAKKH--GVSVVFSYLDENMCIDYEDIISKIDDVDSVIIGNPNNPNGGLINKEK 165 (361)
T ss_dssp TC-----SEEEEEESCCT----HHHHHHHHT--TCEEEEEECCTTSCCCHHHHHHHTTTCSEEEEETTBTTTTBCCCHHH
T ss_pred Hc-----CcEEEecCChH----HHHHHHHHc--CCeEEEeecCcccCCCHHHHHHhccCCCEEEEeCCCCCCCCCCCHHH
Confidence 55 77777666432 122222211 3345555553 46778888877654445554555543321 1
Q ss_pred cccHHHHHHHhCCeEEecccCC
Q 024050 193 EEEIIPLCRELGIGIVPYSPLG 214 (273)
Q Consensus 193 ~~~l~~~~~~~gi~v~a~spl~ 214 (273)
-.++.+.|+++|+-++.=...+
T Consensus 166 l~~i~~~~~~~~~~li~De~~~ 187 (361)
T 3ftb_A 166 FIHVLKLAEEKKKTIIIDEAFI 187 (361)
T ss_dssp HHHHHHHHHHHTCEEEEECSSG
T ss_pred HHHHHHHhhhcCCEEEEECcch
Confidence 2678999999999999654443
No 173
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=50.08 E-value=1.2e+02 Score=26.96 Aligned_cols=130 Identities=12% Similarity=0.077 Sum_probs=79.3
Q ss_pred HHHHHhcC---CCCCEEEEeccCcCCC-CCccc---cccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHH
Q 024050 73 LGKALKQL---PREKIQVATKFGIAGI-GVAGV---IVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIG 145 (273)
Q Consensus 73 lg~~l~~~---~r~~~~i~tK~~~~~~-~~~~~---~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~ 145 (273)
+-+++++. .-+++.|..-+..... ..+.+ ...++++...+-+++.++.+ +++++..|-...+ |+
T Consensus 224 i~~Air~agy~~G~dv~l~vD~aase~~~~g~Y~l~~~~~t~~eai~~~~~ll~~y-----~i~~IEdPl~~dD----~e 294 (428)
T 3tqp_A 224 ILEAIEDANYVPGKDIYLALDAASSELYQNGRYDFENNQLTSEEMIDRLTEWTKKY-----PVISIEDGLSEND----WA 294 (428)
T ss_dssp HHHHHHHTTCCBTTTBEEEEECCGGGSEETTEECCSSSCBCHHHHHHHHHHHHHHS-----CEEEEECCSCTTC----HH
T ss_pred HHHHHHHhhcccCCceEEEEecchhhhccCCceeccccccCHHHHHHHHHHHHhhc-----ccceEeCCCCccc----HH
Confidence 35677763 4567777765421100 00000 01356777777777667755 4788888865443 44
Q ss_pred HHHHHHHc-C-CccEEecC--CCCHHHHHHHhhcCCceEEeeeccccccccc-ccHHHHHHHhCCeEEecc
Q 024050 146 EMKKLVEE-G-KIKYIGLS--EASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYS 211 (273)
Q Consensus 146 ~L~~l~~~-G-~ir~iGvS--~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l~~~~~~~gi~v~a~s 211 (273)
.+.+|.+. + .|.-+|=- -.+++.+.++++....+++|+..+-.---.+ ..+...|+++|+.++.-.
T Consensus 295 g~~~L~~~~~~pI~ivGDel~vt~~~~~~~~i~~~a~d~i~iKv~~iGGiTealkia~lA~~~G~~~~v~H 365 (428)
T 3tqp_A 295 GWKLLTERLENKVQLVGDDIFVTNPDILEKGIKKNIANAILVKLNQIGTLTETLATVGLAKSNKYGVIISH 365 (428)
T ss_dssp HHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHhcCCCcceeccccccCCHHHHHHHHHhCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEEEeC
Confidence 55555543 2 34334533 2388899999988888899988775443212 678999999999966543
No 174
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=49.85 E-value=50 Score=25.78 Aligned_cols=68 Identities=12% Similarity=0.065 Sum_probs=46.1
Q ss_pred CHHHHHHHHHHHHHc-CCccEEecCCCC--HHHHHHHhhcCCceEEeeecccccccccccHHHHHHHhCCeEEecc
Q 024050 139 PIEETIGEMKKLVEE-GKIKYIGLSEAS--PGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYS 211 (273)
Q Consensus 139 ~~~~~~~~L~~l~~~-G~ir~iGvS~~~--~~~l~~~~~~~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~s 211 (273)
...+++++|.++++. ++|.-+|..|.. .+.+..+++ .++.+..|+--+. ....+..+++.|+.++.-.
T Consensus 79 s~~Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~---~~i~~~~~~~~~e--~~~~i~~l~~~G~~vvVG~ 149 (196)
T 2q5c_A 79 TRFDTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLG---VKIKEFLFSSEDE--ITTLISKVKTENIKIVVSG 149 (196)
T ss_dssp CHHHHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHT---CEEEEEEECSGGG--HHHHHHHHHHTTCCEEEEC
T ss_pred CHhHHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhC---CceEEEEeCCHHH--HHHHHHHHHHCCCeEEECC
Confidence 457899999999876 557777777753 345555554 4455544433222 2679999999999998753
No 175
>1bwv_S Rubisco, protein (ribulose bisphosphate carboxylase); carbon dioxide fixation, complex (rubisco-reaction intermedi high specificity factor; HET: KCX CAP; 2.40A {Galdieria partita} SCOP: d.73.1.1 PDB: 1iwa_B
Probab=49.60 E-value=76 Score=23.43 Aligned_cols=84 Identities=15% Similarity=0.073 Sum_probs=56.5
Q ss_pred cceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCC-ccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCcc
Q 024050 22 KLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGIT-FFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAG 100 (273)
Q Consensus 22 ~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin-~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~ 100 (273)
+|-+||.++ =.++++++..+.|++++..|.+ .+.-++. ...|...+-+-|++...
T Consensus 2 ~~~~etfSy----LP~ltdeqI~kQI~Yll~qGw~p~iEf~d~---------------~~~r~~yW~mWkLPmF~----- 57 (138)
T 1bwv_S 2 RITQGTFSF----LPDLTDEQIKKQIDYMISKKLAIGIEYTND---------------IHPRNAYWEIWGLPLFD----- 57 (138)
T ss_dssp CCCCSTTTT----SCCCCHHHHHHHHHHHHHTTCEEEEEEESC---------------CCTTCCCCEECSSCBCS-----
T ss_pred ceecceecc----CCCCCHHHHHHHHHHHHHCCCeeeEEecCC---------------CCCccCEEeccCCCCcC-----
Confidence 356777653 3356899999999999999975 2332221 14567777777765433
Q ss_pred ccccCCHHHHHHHHHHHHHHcCCCcccEEEec
Q 024050 101 VIVKGAPDYVRSCCEASLKRLDVDYIDLYYQH 132 (273)
Q Consensus 101 ~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh 132 (273)
..++..+...|++.++.---.||-|+-+.
T Consensus 58 ---~td~~~Vl~Ele~C~k~~p~~YVRliGfD 86 (138)
T 1bwv_S 58 ---VTDPAAVLFEINACRKARSNFYIKVVGFS 86 (138)
T ss_dssp ---CCCHHHHHHHHHHHHHHCTTSEEEEEEEE
T ss_pred ---CCCHHHHHHHHHHHHHHCCCCeEEEEEEe
Confidence 34688899999999987765665554444
No 176
>3uj2_A Enolase 1; enzyme function initiative, EFI, lyase; 2.00A {Anaerostipes caccae}
Probab=49.56 E-value=98 Score=27.69 Aligned_cols=129 Identities=14% Similarity=0.066 Sum_probs=78.1
Q ss_pred HHHHHhcC---CCCCEEEEeccCcCC-C--CCcccc-----ccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHH
Q 024050 73 LGKALKQL---PREKIQVATKFGIAG-I--GVAGVI-----VKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIE 141 (273)
Q Consensus 73 lg~~l~~~---~r~~~~i~tK~~~~~-~--~~~~~~-----~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~ 141 (273)
+-+++++. .-+++.|..-+.... . +.+.+. ..++++...+-+++.|+.+ +++++..|-...+
T Consensus 246 i~~AIr~agy~~G~dv~l~vD~aase~~~~~~g~Y~l~~~~~~~t~~eai~~~~~lle~y-----~i~~IEdPl~~dD-- 318 (449)
T 3uj2_A 246 ILEAVKLAGYEPGRDFVLAMDAASSEWKGEKKGEYILPKCKRKFASEELVAHWKSLCERY-----PIVSIEDGLDEED-- 318 (449)
T ss_dssp HHHHHHHTTCCBTTTBEEEEECCGGGCBCSSTTEEECTTTCCEEEHHHHHHHHHHHHHHS-----CEEEEESCSCTTC--
T ss_pred HHHHHHHhccccCCceEEEEEcchhhhccccCceeeccCcccccCHHHHHHHHHHHHHhc-----CceEEECCCCcch--
Confidence 44677663 456788776653210 0 001110 1235666666666666654 5888888865443
Q ss_pred HHHHHHHHHHHc-C-CccEEecCCC--CHHHHHHHhhcCCceEEeeeccccccccc-ccHHHHHHHhCCeEEec
Q 024050 142 ETIGEMKKLVEE-G-KIKYIGLSEA--SPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPY 210 (273)
Q Consensus 142 ~~~~~L~~l~~~-G-~ir~iGvS~~--~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l~~~~~~~gi~v~a~ 210 (273)
|+.+.+|.+. | .|--.|=-.+ ++..+.++++....+++|+..+-.---.+ ..+...|+++|+.++.-
T Consensus 319 --~eg~~~L~~~~~~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~iKv~~iGGiTea~kia~lA~~~Gi~~~v~ 390 (449)
T 3uj2_A 319 --WEGWQYMTRELGDKIQLVGDDLFVTNTERLNKGIKERCGNSILIKLNQIGTVSETLEAIKMAHKAGYTAVVS 390 (449)
T ss_dssp --HHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCSHHHHHHHHHHHHHTTCEEEEE
T ss_pred --HHHHHHHHHHhCCCceEECCcceeCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCeEEEe
Confidence 4555555554 3 4543343333 68899999998888899998776543212 67899999999996553
No 177
>1uwk_A Urocanate hydratase; hydrolase, urocanase, imidazolonepropionate, histidine metabolism, lyase; HET: NAD URO; 1.19A {Pseudomonas putida} SCOP: e.51.1.1 PDB: 1w1u_A* 1uwl_A* 2v7g_A*
Probab=49.38 E-value=31 Score=31.30 Aligned_cols=116 Identities=16% Similarity=0.228 Sum_probs=77.2
Q ss_pred HHHHHHHCCCCcc--ccccCCC--------CCcHHHHHHHHHhc---CCCCCEEEEeccCcCCCCC---------ccccc
Q 024050 46 MIKHAFSKGITFF--DTADVYG--------QNANEVLLGKALKQ---LPREKIQVATKFGIAGIGV---------AGVIV 103 (273)
Q Consensus 46 ~l~~A~~~Gin~~--DtA~~Yg--------~g~se~~lg~~l~~---~~r~~~~i~tK~~~~~~~~---------~~~~~ 103 (273)
-++..-+.|+..+ =||..|- +|.-|.++..+-+. -.+..+|+++-++...-.. -....
T Consensus 117 ~f~~l~~~Gl~mYGQMTAGsw~YIG~QGIvqGTyeT~~~~~rk~~gg~L~G~~~lTaGLGGMgGAQplA~~mag~v~i~~ 196 (557)
T 1uwk_A 117 HFNELDAKGLAMYGQMTAGSWIYIGSQGIVQGTYETFVEAGRQHYGGSLKGKWVLTAGLGGMGGAQPLAATLAGACSLNI 196 (557)
T ss_dssp HHHHHHHTTCCCBCTTTTTTTCCCTTHHHHHHHHHHHHHHHHHHTSSCCTTCEEEEECCSTTTTHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHcccccccCccccceeeecCcceeecHHHHHHHHHHHhcCCCCCceEEEEecCCccchhhHHHHHHcCceEEEE
Confidence 3445566787733 2444443 45566665533332 4578899999887543110 00122
Q ss_pred cCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhc
Q 024050 104 KGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV 175 (273)
Q Consensus 104 ~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~ 175 (273)
+.++..|++ |+.+.|+|.+. .++++.++...+.+++|+..+||+-..-++.++++.+.
T Consensus 197 Evd~~ri~~-------R~~~gyld~~~-------~~ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~l~~~ 254 (557)
T 1uwk_A 197 ESQQSRIDF-------RLETRYVDEQA-------TDLDDALVRIAKYTAEGKAISIALHGNAAEILPELVKR 254 (557)
T ss_dssp ESCHHHHHH-------HHHTTSCCEEC-------SSHHHHHHHHHHHHHTTCCCEEEEESCHHHHHHHHHHH
T ss_pred EECHHHHHH-------HHhCCCceeEc-------CCHHHHHHHHHHHHHcCCceEEEEeccHHHHHHHHHHC
Confidence 445555554 56678888754 56899999999999999999999999888888888776
No 178
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=48.83 E-value=1.3e+02 Score=25.72 Aligned_cols=151 Identities=12% Similarity=0.111 Sum_probs=81.1
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCC--C--cHHHHHHHHHhc-----CCC-CCEEEEeccCcCCCCCccccccCCHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQ--N--ANEVLLGKALKQ-----LPR-EKIQVATKFGIAGIGVAGVIVKGAPD 108 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~--g--~se~~lg~~l~~-----~~r-~~~~i~tK~~~~~~~~~~~~~~~~~~ 108 (273)
..++..+.+..+++.+. ....|+. | .-.+.+.+++.. ... +++++++-
T Consensus 42 ~~~~v~~a~~~~~~~~~----~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~i~~~~g------------------ 99 (422)
T 3fvs_A 42 PPDFAVEAFQHAVSGDF----MLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVG------------------ 99 (422)
T ss_dssp CCHHHHHHHHHHHHSCG----GGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCHHHHEEEESH------------------
T ss_pred CCHHHHHHHHHHHhCCC----ccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEECC------------------
Confidence 45778888888888764 1234542 2 344566666653 222 35555431
Q ss_pred HHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcC-CccEEecCC---------------CCHHHHHHH
Q 024050 109 YVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEG-KIKYIGLSE---------------ASPGTIRRA 172 (273)
Q Consensus 109 ~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G-~ir~iGvS~---------------~~~~~l~~~ 172 (273)
..+++...+..+ ++.=|-+++..|.... ... . +...| ++..+-+.. .+.+.++++
T Consensus 100 -~~~a~~~~~~~~-~~~gd~vl~~~p~~~~-~~~---~---~~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~ 170 (422)
T 3fvs_A 100 -GYGALFTAFQAL-VDEGDEVIIIEPFFDC-YEP---M---TMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGK 170 (422)
T ss_dssp -HHHHHHHHHHHH-CCTTCEEEEEESCCTT-HHH---H---HHHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTT
T ss_pred -hHHHHHHHHHHH-cCCCCEEEEcCCCchh-hHH---H---HHHcCCEEEEEecccccccccccccccCCCCCHHHHHhh
Confidence 123344444444 2333656666654322 222 2 22233 455665543 467777776
Q ss_pred hhc-CCceEEeeeccccccc----ccccHHHHHHHhCCeEEecccCCCccCCC
Q 024050 173 HAV-HPITAVQMEWSLWTRD----IEEEIIPLCRELGIGIVPYSPLGRGFFGG 220 (273)
Q Consensus 173 ~~~-~~~~~~q~~~~l~~~~----~~~~l~~~~~~~gi~v~a~spl~~G~L~~ 220 (273)
++. ....++..+.|+.-.. .-.++.+.|+++|+-++.=...+.....+
T Consensus 171 ~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~ 223 (422)
T 3fvs_A 171 FTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDG 223 (422)
T ss_dssp CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTT
T ss_pred cCCCceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCC
Confidence 643 2333444444543322 12789999999999999777766444433
No 179
>3ekg_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, nysgrc, L-rhamnonate dehydratase,target PSI-2; HET: TLA; 1.60A {Azotobacter vinelandii avop} PDB: 2oz3_A*
Probab=47.97 E-value=62 Score=28.50 Aligned_cols=69 Identities=16% Similarity=0.032 Sum_probs=50.0
Q ss_pred HHHHHHHHHHcCCcc---EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-ccHHHHHHHhCCeEEecc
Q 024050 143 TIGEMKKLVEEGKIK---YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYS 211 (273)
Q Consensus 143 ~~~~L~~l~~~G~ir---~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l~~~~~~~gi~v~a~s 211 (273)
-++.+.+|+++-.+- ..|=+.++...+.++++...++++|+..+-.---.+ ..+...|+.+|+.+...+
T Consensus 249 d~~~~a~l~~~~~~pi~Ia~gE~~~~~~~~~~li~~~a~dii~~d~~~~GGitea~kia~lA~a~gv~v~~h~ 321 (404)
T 3ekg_A 249 DYWGYAELRRNAPTGMMVTTGEHEATRWGFRMLLEMGCCDIIQPDVGWCGGVTELLKISALADAHNALVVPHG 321 (404)
T ss_dssp CHHHHHHHHHHSCTTCEEEECTTCCHHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCEECCCC
T ss_pred cHHHHHHHHHhcCCCeEEEecCccCCHHHHHHHHHcCCCCeEecChhhcCCccHHHHHHHHHHHcCCEEEecC
Confidence 356677777765442 456667788888888888888899987776532111 678999999999997654
No 180
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=47.33 E-value=78 Score=27.33 Aligned_cols=155 Identities=15% Similarity=0.115 Sum_probs=84.9
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCC---CcHHHHHHHHHhc-CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQ---NANEVLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCC 114 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~---g~se~~lg~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~ 114 (273)
+.++..+.++.+++.|++.|-.- .|. ....+.+. ++++ ...+++.|..-.... ++.+...+-+
T Consensus 162 ~~e~~~~~a~~~~~~G~~~~K~K--vg~~~~~~d~~~v~-avr~~~g~~~~~l~vDaN~~----------~~~~~a~~~~ 228 (377)
T 2pge_A 162 EAAFMQEQIEAKLAEGYGCLKLK--IGAIDFDKECALLA-GIRESFSPQQLEIRVDANGA----------FSPANAPQRL 228 (377)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEE--C---CHHHHHHHHH-HHHHHSCTTTCEEEEECTTB----------BCTTTHHHHH
T ss_pred CHHHHHHHHHHHHHHhhhhheee--cCCCChHHHHHHHH-HHHHHcCCCCceEEEECCCC----------CCHHHHHHHH
Confidence 46777788888889999877532 121 11223333 3333 321344444433211 2233232222
Q ss_pred HHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHH--HHHHhhcCCceEEeeeccccccc
Q 024050 115 EASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGT--IRRAHAVHPITAVQMEWSLWTRD 191 (273)
Q Consensus 115 ~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~--l~~~~~~~~~~~~q~~~~l~~~~ 191 (273)
+.|+.+ ++.++..|-...+ ++.+.+|.++-.|- ..|=|.++... +.++++....+++|+..+-.---
T Consensus 229 -~~l~~~-----~i~~iEqP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~i~~~a~d~i~ik~~~~GGi 298 (377)
T 2pge_A 229 -KRLSQF-----HLHSIEQPIRQHQ----WSEMAALCANSPLAIALDEELIGLGAEQRSAMLDAIRPQYIILKPSLLGGF 298 (377)
T ss_dssp -HHHHTT-----CCSEEECCBCSSC----HHHHHHHHHHCSSCEEESGGGTTCCTHHHHHHHHHHCCSEEEECHHHHTSH
T ss_pred -HHHhcC-----CCcEEEccCCccc----HHHHHHHHhhCCCcEEECCccCCcchHHHHHHHHhCCCCEEEECchhcCCH
Confidence 334443 5667777754333 56677777664443 22323344333 66777766678888877654321
Q ss_pred cc-ccHHHHHHHhCCeEEecccCCCc
Q 024050 192 IE-EEIIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 192 ~~-~~l~~~~~~~gi~v~a~spl~~G 216 (273)
.+ ..+...|+++|+.++..+.+..+
T Consensus 299 t~~~~i~~~A~~~g~~~~~~~~~es~ 324 (377)
T 2pge_A 299 HYAGQWIELARERGIGFWITSALESN 324 (377)
T ss_dssp HHHHHHHHHHHHTTCEEEEBCCSCCH
T ss_pred HHHHHHHHHHHHCCCeEEecCCcccH
Confidence 11 66888999999999888776443
No 181
>2c4w_A 3-dehydroquinate dehydratase; 3-dehydroquinase, shikimate pathway, aromatic amino acid biosynthesis, lyase, sulphonamide; HET: GAJ; 1.55A {Helicobacter pylori} PDB: 2c57_A* 2xda_A* 1j2y_A* 2wks_A* 2xb9_A* 2c4v_A* 2xd9_A*
Probab=47.21 E-value=70 Score=24.64 Aligned_cols=81 Identities=16% Similarity=0.137 Sum_probs=59.1
Q ss_pred cCCHHHHHHHHHHHHH--HcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHc---CCccEEecCCCCHHHHHHHhhcCCc
Q 024050 104 KGAPDYVRSCCEASLK--RLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEE---GKIKYIGLSEASPGTIRRAHAVHPI 178 (273)
Q Consensus 104 ~~~~~~i~~~~~~sL~--~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~---G~ir~iGvS~~~~~~l~~~~~~~~~ 178 (273)
..+.+.|.+.+++.-+ .+|+ .++.+|- ..-.+.++++.+...+ |.|-.=|--+++.-.|.+++....+
T Consensus 33 ~~Tl~di~~~l~~~a~~~~~g~-~l~~~QS------N~EGeLId~Ih~a~~~~~dgIIINpgAyTHtSvAlrDAl~~v~~ 105 (176)
T 2c4w_A 33 MVTLDQIHEIMQTFVKQGNLDV-ELEFFQT------NFEGEIIDKIQESVGSEYEGIIINPGAFSHTSIAIADAIMLAGK 105 (176)
T ss_dssp SCCHHHHHHHHHHHHHHTTCCE-EEEEEEC------SCHHHHHHHHHHHHSSSCCEEEEECGGGGGTCHHHHHHHHTSSS
T ss_pred cCCHHHHHHHHHHHhccccCCC-EEEEEee------CcHHHHHHHHHHhccCCeeEEEECcchhccchHHHHHHHHhCCC
Confidence 4578899999999988 8885 4666662 2246788999988765 3344445556666678888888777
Q ss_pred eEEeeeccccccc
Q 024050 179 TAVQMEWSLWTRD 191 (273)
Q Consensus 179 ~~~q~~~~l~~~~ 191 (273)
.++.++.|-.+.+
T Consensus 106 P~VEVHiSNi~aR 118 (176)
T 2c4w_A 106 PVIEVHLTNIQAR 118 (176)
T ss_dssp CEEEEESSCGGGS
T ss_pred CEEEEEecCcccc
Confidence 8899988877654
No 182
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=46.90 E-value=1.4e+02 Score=25.84 Aligned_cols=150 Identities=11% Similarity=0.057 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHCCCCccccccCCC---CC-cHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccC-CHHHHHHHHHH
Q 024050 42 DGISMIKHAFSKGITFFDTADVYG---QN-ANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKG-APDYVRSCCEA 116 (273)
Q Consensus 42 ~~~~~l~~A~~~Gin~~DtA~~Yg---~g-~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~-~~~~i~~~~~~ 116 (273)
+..+..+.+.+.|++.|=.- ..| .. ......=+++++.-.+++-|...... .+ +.+...+ +-+
T Consensus 155 ~~~~~a~~~~~~G~~~~K~~-k~g~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~----------~~~~~~~A~~-~~~ 222 (394)
T 3mqt_A 155 AYKPLIAKAKERGAKAVKVC-IIPNDKVSDKEIVAYLRELREVIGWDMDMMVDCLY----------RWTDWQKARW-TFR 222 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEE-CCCCTTSCHHHHHHHHHHHHHHHCSSSEEEEECTT----------CCSCHHHHHH-HHH
T ss_pred HHHHHHHHHHHcCCCEEEec-ccCCCccCHHHHHHHHHHHHHHhCCCCeEEEECCC----------CCCCHHHHHH-HHH
Confidence 55667888899999977651 112 11 11222233455411234444444321 13 4444333 233
Q ss_pred HHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEE-ecCCCCHHHHHHHhhcCCceEEeeeccccccccc-c
Q 024050 117 SLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-E 194 (273)
Q Consensus 117 sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~i-GvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~ 194 (273)
.|+.+++++ ++.|-... .++.+.++++.-.|-=. |=+-++++.++++++....+++|+..+-.---.+ .
T Consensus 223 ~L~~~~i~~-----iEeP~~~~----~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~ 293 (394)
T 3mqt_A 223 QLEDIDLYF-----IEACLQHD----DLIGHQKLAAAINTRLCGAEMSTTRFEAQEWLEKTGISVVQSDYNRCGGVTELL 293 (394)
T ss_dssp HTGGGCCSE-----EESCSCTT----CHHHHHHHHHHSSSEEEECTTCCHHHHHHHHHHHHCCSEECCCTTTSSCHHHHH
T ss_pred HHhhcCCeE-----EECCCCcc----cHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCeEecCccccCCHHHHH
Confidence 455565544 45554322 35677788877655433 3344678888898888788899987776542212 6
Q ss_pred cHHHHHHHhCCeEEeccc
Q 024050 195 EIIPLCRELGIGIVPYSP 212 (273)
Q Consensus 195 ~l~~~~~~~gi~v~a~sp 212 (273)
.+...|+++|+.+...+.
T Consensus 294 ~ia~~A~~~gi~~~~h~~ 311 (394)
T 3mqt_A 294 RIMDICEHHNAQLMPHNW 311 (394)
T ss_dssp HHHHHHHHHTCEECCCCC
T ss_pred HHHHHHHHcCCEEeccCC
Confidence 789999999999987663
No 183
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=46.76 E-value=1e+02 Score=26.95 Aligned_cols=149 Identities=9% Similarity=0.021 Sum_probs=84.5
Q ss_pred HHHHHHHHHCCCCccccccCC----CCCc---H-----HHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHH
Q 024050 44 ISMIKHAFSKGITFFDTADVY----GQNA---N-----EVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVR 111 (273)
Q Consensus 44 ~~~l~~A~~~Gin~~DtA~~Y----g~g~---s-----e~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~ 111 (273)
.++.+.+++.|++.|=.-... ..|. . ....=+++++.-.+++-|...... .++.+...
T Consensus 161 ~~~a~~~~~~G~~~~K~~~~~~~~~K~G~~~~~~~~~~d~e~v~avR~a~g~d~~l~vDaN~----------~~~~~~A~ 230 (410)
T 3dip_A 161 GVLAESLVAEGYAAMKIWPFDDFASITPHHISLTDLKDGLEPFRKIRAAVGQRIEIMCELHS----------LWGTHAAA 230 (410)
T ss_dssp HHHHHHHHHTTCSEEEECTTHHHHTTCTTCCCHHHHHHHHHHHHHHHHHHTTSSEEEEECTT----------CBCHHHHH
T ss_pred HHHHHHHHHcCCCEEEECCccCccccccCcCCHHHHHHHHHHHHHHHHHcCCCceEEEECCC----------CCCHHHHH
Confidence 456678889999877541110 1110 1 112223454421234444433221 13444333
Q ss_pred HHHHHHHHHcCCCcccEEEecCC-CCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccc
Q 024050 112 SCCEASLKRLDVDYIDLYYQHRV-DTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWT 189 (273)
Q Consensus 112 ~~~~~sL~~L~~d~iDl~~lh~~-~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~ 189 (273)
+ +-+.|+.++++ ++..| -... .++.+.++++.-.|- ..|=|-++++.++++++....+++|+..+-.-
T Consensus 231 ~-~~~~L~~~~i~-----~iEqP~~~~~----~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~G 300 (410)
T 3dip_A 231 R-ICNALADYGVL-----WVEDPIAKMD----NIPAVADLRRQTRAPICGGENLAGTRRFHEMLCADAIDFVMLDLTWCG 300 (410)
T ss_dssp H-HHHHGGGGTCS-----EEECCBSCTT----CHHHHHHHHHHHCCCEEECTTCCSHHHHHHHHHTTCCSEEEECTTTSS
T ss_pred H-HHHHHHhcCCC-----EEECCCCCcc----cHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCeEeecccccC
Confidence 2 23355555544 44455 3322 245666666654443 33445678899999999888999999887764
Q ss_pred cccc-ccHHHHHHHhCCeEEeccc
Q 024050 190 RDIE-EEIIPLCRELGIGIVPYSP 212 (273)
Q Consensus 190 ~~~~-~~l~~~~~~~gi~v~a~sp 212 (273)
--.+ ..+...|+++|+.+...++
T Consensus 301 Git~~~~ia~~A~~~gi~~~~h~~ 324 (410)
T 3dip_A 301 GLSEGRKIAALAETHARPLAPHXT 324 (410)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECSS
T ss_pred CHHHHHHHHHHHHHcCCEEeeeCc
Confidence 2112 6789999999999987765
No 184
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=46.67 E-value=1.1e+02 Score=25.41 Aligned_cols=98 Identities=14% Similarity=0.149 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHHcCCCcccEEEec-CCCCC-CCHH----HHHHHHHHHHHc-CCccEEecCCCCHHHHHHHhhcCCce
Q 024050 107 PDYVRSCCEASLKRLDVDYIDLYYQH-RVDTS-VPIE----ETIGEMKKLVEE-GKIKYIGLSEASPGTIRRAHAVHPIT 179 (273)
Q Consensus 107 ~~~i~~~~~~sL~~L~~d~iDl~~lh-~~~~~-~~~~----~~~~~L~~l~~~-G~ir~iGvS~~~~~~l~~~~~~~~~~ 179 (273)
.+.+.+..++. -.-|.|.||+---- +|... .+.+ .....++.+++. +. -|.+-+++++.++++++.....
T Consensus 37 ~~~a~~~a~~~-v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~--piSIDT~~~~va~aAl~aGa~i 113 (282)
T 1aj0_A 37 LIDAVKHANLM-INAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEV--WISVDTSKPEVIRESAKVGAHI 113 (282)
T ss_dssp HHHHHHHHHHH-HHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCC--EEEEECCCHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHH-HHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCC--eEEEeCCCHHHHHHHHHcCCCE
Confidence 44555544333 33578999988743 35422 2222 244555556554 43 4788899999999999986544
Q ss_pred EEeeecccccccccccHHHHHHHhCCeEEeccc
Q 024050 180 AVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSP 212 (273)
Q Consensus 180 ~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~sp 212 (273)
++-+ |.. . ..++++.++++|..++.+..
T Consensus 114 INdv--sg~-~--d~~~~~~~a~~~~~vVlmh~ 141 (282)
T 1aj0_A 114 INDI--RSL-S--EPGALEAAAETGLPVCLMHM 141 (282)
T ss_dssp EEET--TTT-C--STTHHHHHHHHTCCEEEECC
T ss_pred EEEC--CCC-C--CHHHHHHHHHhCCeEEEEcc
Confidence 4433 433 2 25799999999999999853
No 185
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=45.49 E-value=1.5e+02 Score=26.15 Aligned_cols=140 Identities=15% Similarity=0.108 Sum_probs=73.4
Q ss_pred CCHHHHHHHHH-------HHHHCCCCccccccC-------------------CCCCcH-H---HHHHHHHhc----C---
Q 024050 38 VSEEDGISMIK-------HAFSKGITFFDTADV-------------------YGQNAN-E---VLLGKALKQ----L--- 80 (273)
Q Consensus 38 ~~~~~~~~~l~-------~A~~~Gin~~DtA~~-------------------Yg~g~s-e---~~lg~~l~~----~--- 80 (273)
++.+|..++++ .|.++|+..++.-.. || |.- | +++-+.++. .
T Consensus 160 mt~~eI~~ii~~F~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yG-Gs~lenR~Rf~~evv~aVr~~v~~~ 238 (419)
T 3l5a_A 160 MSHEKINSIIQQYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYG-ADSLKNRARLCLEVMRAVQEVIDKE 238 (419)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTS-TTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCC-CchhhhhhHHHHHHHHHHHHHHhhh
Confidence 56666666554 466889887775322 33 322 3 333333332 2
Q ss_pred CCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHH-cCCCcccEEEecC-----CCCCCCHHHHHHHHHHHHH--
Q 024050 81 PREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKR-LDVDYIDLYYQHR-----VDTSVPIEETIGEMKKLVE-- 152 (273)
Q Consensus 81 ~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~-L~~d~iDl~~lh~-----~~~~~~~~~~~~~L~~l~~-- 152 (273)
..+++.|..|+.+.....+ ....+.+...+-+ +.|+. .|+|||++-.-.. .....+....++..+.+++
T Consensus 239 ~~~~f~v~vRis~~~~~~~--~~G~~~ed~~~la-~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v 315 (419)
T 3l5a_A 239 APDNFILGFRATPEETRGS--DLGYTIDEFNQLI-DWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHL 315 (419)
T ss_dssp CCTTCEEEEEECSCEEETT--EEEECHHHHHHHH-HHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHH
T ss_pred cCCCeeEEEecccccccCC--CCCCCHHHHHHHH-HHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHc
Confidence 1457889999876542111 0013445544433 44555 8988877643211 0000010001222333333
Q ss_pred cCCccEEecCC-CCHHHHHHHhhcCCceEEee
Q 024050 153 EGKIKYIGLSE-ASPGTIRRAHAVHPITAVQM 183 (273)
Q Consensus 153 ~G~ir~iGvS~-~~~~~l~~~~~~~~~~~~q~ 183 (273)
.|.|--|++.. .+++..+++++. .+.+.+
T Consensus 316 ~~~iPVI~~GgI~t~e~Ae~~L~~--aDlVai 345 (419)
T 3l5a_A 316 AGRIPLIASGGINSPESALDALQH--ADMVGM 345 (419)
T ss_dssp TTSSCEEECSSCCSHHHHHHHGGG--CSEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHHHh--CCcHHH
Confidence 34677788877 588999998887 666655
No 186
>2p3z_A L-rhamnonate dehydratase; enolase, structural genomics, PSI, protein structure initiat YORK structural genomics research consortium; 1.80A {Salmonella typhimurium LT2} PDB: 3box_A 3cxo_A* 2gsh_A 3d47_A 3d46_A 2i5q_A
Probab=44.83 E-value=77 Score=27.96 Aligned_cols=81 Identities=15% Similarity=0.130 Sum_probs=53.1
Q ss_pred cEEEecCCCCCCCHHHHHHHHHHHHHcCC--cc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-ccHHHHHHH
Q 024050 127 DLYYQHRVDTSVPIEETIGEMKKLVEEGK--IK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEIIPLCRE 202 (273)
Q Consensus 127 Dl~~lh~~~~~~~~~~~~~~L~~l~~~G~--ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l~~~~~~ 202 (273)
++.++..|-... -++.+.+|.++-. |. ..|=+.++...+.++++.. .+++|+..+-.---.+ ..+...|++
T Consensus 249 ~i~~iEqPl~~~----d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~i~~~-~d~i~ik~~~~GGitea~~ia~lA~~ 323 (415)
T 2p3z_A 249 NLKWIEECLPPQ----QYEGYRELKRNAPAGMMVTSGEHHGTLQSFRTLAETG-IDIMQPDVGWCGGLTTLVEIAALAKS 323 (415)
T ss_dssp TCCEEECCSCTT----CHHHHHHHHHHSCTTCEEEECTTCCSHHHHHHHHHTT-CSEECCCHHHHTCHHHHHHHHHHHHH
T ss_pred CCceEeCCCCcc----hHHHHHHHHHhcCCCCcEEcCCCCCCHHHHHHHHHcC-CCEEEeCccccCCHHHHHHHHHHHHH
Confidence 455555554332 3556666665433 21 2344557888899988888 9999987766432112 678999999
Q ss_pred hCCeEEeccc
Q 024050 203 LGIGIVPYSP 212 (273)
Q Consensus 203 ~gi~v~a~sp 212 (273)
+|+.++..++
T Consensus 324 ~gi~v~~h~~ 333 (415)
T 2p3z_A 324 RGQLVVPHGS 333 (415)
T ss_dssp TTCCBCCCCC
T ss_pred cCCEEEecCh
Confidence 9999887643
No 187
>2okt_A OSB synthetase, O-succinylbenzoic acid synthetase; enolase, structural genom protein structure initiative, PSI, nysgrc; 1.30A {Staphylococcus aureus subsp} PDB: 2ola_A 3h70_A
Probab=43.73 E-value=21 Score=30.63 Aligned_cols=86 Identities=9% Similarity=-0.083 Sum_probs=55.1
Q ss_pred ccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-ccHHHHHHHhC
Q 024050 126 IDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEIIPLCRELG 204 (273)
Q Consensus 126 iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l~~~~~~~g 204 (273)
.++.++..|-...+ ++.+.+ .+.+.=-..|=|.++...+.++++...++++|+..+..---.+ ..+...|+++|
T Consensus 191 ~~i~~iEqP~~~~d----~~~~~~-~~~~ipIa~dEs~~~~~~~~~~i~~~a~d~i~~k~~~~GGit~~~~ia~~A~~~g 265 (342)
T 2okt_A 191 EQVLYIEEPFKDIS----MLDEVA-DGTIPPIALDEKATSLLDIINLIELYNVKVVVLKPFRLGGIDKVQTAIDTLKSHG 265 (342)
T ss_dssp GCEEEEECCCSSGG----GGGGSC-TTSSCCEEESTTCCCHHHHHHHHHHSCCCEEEECHHHHTSGGGHHHHHHHHHHTT
T ss_pred CCCcEEECCCCCcc----HHHHHH-hcCCCCEEecCCCCCHHHHHHHHHhCCCCEEEEChhhcCCHHHHHHHHHHHHHCC
Confidence 46667776644322 222222 2222222445566788889998888888899987765432112 67899999999
Q ss_pred CeEEecccCCCc
Q 024050 205 IGIVPYSPLGRG 216 (273)
Q Consensus 205 i~v~a~spl~~G 216 (273)
+.++..+.+..+
T Consensus 266 i~~~~~~~~es~ 277 (342)
T 2okt_A 266 AKVVIGGMYEYG 277 (342)
T ss_dssp CEEEEBCSSCCH
T ss_pred CEEEEcCCcccH
Confidence 999998776543
No 188
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=43.73 E-value=57 Score=27.98 Aligned_cols=84 Identities=18% Similarity=0.100 Sum_probs=50.2
Q ss_pred CCcHHHHHHHHHhcCCCCCEEEEeccCcCCC--C-CccccccCC----HHHHHHHHHHHHHHcCCCcccEEEecCCCCCC
Q 024050 66 QNANEVLLGKALKQLPREKIQVATKFGIAGI--G-VAGVIVKGA----PDYVRSCCEASLKRLDVDYIDLYYQHRVDTSV 138 (273)
Q Consensus 66 ~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~--~-~~~~~~~~~----~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~ 138 (273)
.|..|+.+-+++++..+.+-+|.-|.+...+ + .....+..+ ...--+..+..|++.|+ +..+...
T Consensus 234 ~g~~e~~~~~~~r~~~~~KPVV~~kaGrs~~~~g~~aa~sHtGalag~~~~~a~~~~aa~~~aGv--------~~v~~~~ 305 (334)
T 3mwd_B 234 GGTEEYKICRGIKEGRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGV--------FVPRSFD 305 (334)
T ss_dssp SSSHHHHHHHHHHTTSCCSCEEEEEECTTCC----------------CGGGSHHHHHHHHHHTTC--------BCCSSGG
T ss_pred CChHHHHHHHHHHhhcCCCCEEEEEcCCCcccccccccccchhhhccCCCccHHHHHHHHHHcCC--------eEcCCHH
Confidence 4567777778888656778888889887765 1 111111111 11112377888999996 3443333
Q ss_pred CHHH-HHHHHHHHHHcCCcc
Q 024050 139 PIEE-TIGEMKKLVEEGKIK 157 (273)
Q Consensus 139 ~~~~-~~~~L~~l~~~G~ir 157 (273)
.+-+ .-+.|++|+++|.|.
T Consensus 306 el~~~~~~~~~~l~~~~~~~ 325 (334)
T 3mwd_B 306 ELGEIIQSVYEDLVANGVIV 325 (334)
T ss_dssp GHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHCCcEe
Confidence 4433 446688999999975
No 189
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=43.05 E-value=1e+02 Score=24.98 Aligned_cols=150 Identities=13% Similarity=-0.001 Sum_probs=78.4
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.+.+.+.++.|++.|+...|.-...=. ..-..+|+-.. +.++++.--. .....++..++...
T Consensus 51 d~~~~~~~~~~al~~g~~~~~i~~~~l~-p~l~~vG~~w~---~g~~~v~~~~-------------~~~~~~~~~l~~l~ 113 (258)
T 2i2x_B 51 EEDDVVEGLQAAIEAGKDPIDLIDDALM-VGMGVVIRLYD---EGVIFLPNVM-------------MSADAMLEGIEYCK 113 (258)
T ss_dssp CHHHHHHHHHHHHHHSCCTTTHHHHTHH-HHHHHHHHHHH---TTSSCHHHHH-------------HHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCHHHHHHHHHH-HHHHHHHHHHh---CCCCcHHHHH-------------HHHHHHHHHHHHHH
Confidence 6888999999999998776654321100 12233444433 2222221110 11223344443333
Q ss_pred HHcCCC--cccEEEecCCCCCCCHHHHHHHHHHHHHcCC-ccEEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-c
Q 024050 119 KRLDVD--YIDLYYQHRVDTSVPIEETIGEMKKLVEEGK-IKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-E 194 (273)
Q Consensus 119 ~~L~~d--~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~-ir~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~ 194 (273)
.++... .---+++..+..+...-...=.-.-|...|. |.++|.. .+++.+.++.....++++-+.+.+-..... .
T Consensus 114 ~~~~~~~~~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~-vp~e~l~~~~~~~~~d~V~lS~l~~~~~~~~~ 192 (258)
T 2i2x_B 114 ENSGATPKTKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRD-VPAEEVLAAVQKEKPIMLTGTALMTTTMYAFK 192 (258)
T ss_dssp TTTSSCCCCSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEE-CCSHHHHHHHHHHCCSEEEEECCCTTTTTHHH
T ss_pred HhhccccCCCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC-CCHHHHHHHHHHcCCCEEEEEeeccCCHHHHH
Confidence 333321 1112444444444433333333345678887 7799997 467777666666566666665554332212 6
Q ss_pred cHHHHHHHhCCe
Q 024050 195 EIIPLCRELGIG 206 (273)
Q Consensus 195 ~l~~~~~~~gi~ 206 (273)
.+++.+++.|..
T Consensus 193 ~~i~~l~~~~~~ 204 (258)
T 2i2x_B 193 EVNDMLLENGIK 204 (258)
T ss_dssp HHHHHHHTTTCC
T ss_pred HHHHHHHhcCCC
Confidence 788888887744
No 190
>2uyg_A 3-dehydroquinate dehydratase; typeii 3-dehydroquinase, lyase; 2.2A {Thermus thermophilus}
Probab=43.05 E-value=71 Score=23.92 Aligned_cols=100 Identities=16% Similarity=0.153 Sum_probs=67.9
Q ss_pred cCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHc---CCccEEecCCCCHHHHHHHhhcCCceE
Q 024050 104 KGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEE---GKIKYIGLSEASPGTIRRAHAVHPITA 180 (273)
Q Consensus 104 ~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~---G~ir~iGvS~~~~~~l~~~~~~~~~~~ 180 (273)
..+.+.|.+.+++.-+.+|+ .++.+|-. .-.+.++++.+...+ |.|-.=|--+++.-.|.+++......+
T Consensus 23 ~~tl~di~~~l~~~a~~~g~-~v~~~QSN------~EgeLId~Ih~a~~~~~dgiIINpgA~THtSvAlrDAl~~v~~P~ 95 (149)
T 2uyg_A 23 RTTLEELEALCEAWGAELGL-GVVFRQTN------YEGQLIEWVQQAHQEGFLAIVLNPGALTHYSYALLDAIRAQPLPV 95 (149)
T ss_dssp SCCHHHHHHHHHHHHHHTTC-CEEEEECS------CHHHHHHHHHHTTTTTCSEEEEECGGGGGTCHHHHHHHHTSCSCE
T ss_pred cCCHHHHHHHHHHHHHHcCC-EEEEEeeC------CHHHHHHHHHHhccCCeeEEEEccchhccccHHHHHHHHhCCCCE
Confidence 35789999999999999996 57777732 246788888888655 334333555566667888888877888
Q ss_pred EeeecccccccccccHHHHHHHhCCeEEecccCCCccCCC
Q 024050 181 VQMEWSLWTRDIEEEIIPLCRELGIGIVPYSPLGRGFFGG 220 (273)
Q Consensus 181 ~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~L~~ 220 (273)
+.++.|-.+.+.+ ++.+- ..+|.+.|.+.|
T Consensus 96 VEVHiSNi~aRE~------FRh~S----~~s~~a~GvI~G 125 (149)
T 2uyg_A 96 VEVHLTNLHAREE------FRRHS----VTAPACRGIVSG 125 (149)
T ss_dssp EEEESSCGGGSCG------GGGCC----SSGGGSSEEEES
T ss_pred EEEEecCcccccc------ccccc----ccccceeEEEEe
Confidence 9998887765421 22221 135666666665
No 191
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=42.61 E-value=1.8e+02 Score=25.65 Aligned_cols=99 Identities=9% Similarity=-0.011 Sum_probs=64.5
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHc-C-CccEEec---CCCCHHHHHHHhhcCCce
Q 024050 105 GAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEE-G-KIKYIGL---SEASPGTIRRAHAVHPIT 179 (273)
Q Consensus 105 ~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~-G-~ir~iGv---S~~~~~~l~~~~~~~~~~ 179 (273)
++++...+-+++..++ .+++++..|-...+ ++.+.+|.++ | .|- |-. +.+++..+.++++....+
T Consensus 267 ~t~~~ai~~~~~L~~~-----~~i~~iEePl~~~d----~~~~~~l~~~~~~~ip-Ia~dEl~~~~~~~~~~~i~~~a~d 336 (431)
T 2fym_A 267 FTSEEFTHFLEELTKQ-----YPIVSIEDGLDESD----WDGFAYQTKVLGDKIQ-LVGDDLFVTNTKILKEGIEKGIAN 336 (431)
T ss_dssp ECHHHHHHHHHHHHHH-----SCEEEEESCSCTTC----HHHHHHHHHHHTTTSE-EEESTTTTTCHHHHHHHHHTTCCS
T ss_pred CCHHHHHHHHHHHHHh-----CCceEEECCCCccc----HHHHHHHHHHhCCCCe-EEeCCcccCCHHHHHHHHHhCCCC
Confidence 4555554444443332 46889998865444 4555555544 2 343 322 557889999999988889
Q ss_pred EEeeeccccccccc-ccHHHHHHHhCCeEEecccC
Q 024050 180 AVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSPL 213 (273)
Q Consensus 180 ~~q~~~~l~~~~~~-~~l~~~~~~~gi~v~a~spl 213 (273)
++|+..+-.---.+ ..+...|+++|+.++...-.
T Consensus 337 ~i~ik~~~~GGite~~~i~~~A~~~g~~~~~~h~~ 371 (431)
T 2fym_A 337 SILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRS 371 (431)
T ss_dssp EEEECGGGTCSHHHHHHHHHHHHHTTCEEEEECCS
T ss_pred EEEECccccCCHHHHHHHHHHHHHCCCeEEEeCCC
Confidence 99997776543222 67899999999999764433
No 192
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=41.98 E-value=1.7e+02 Score=25.32 Aligned_cols=137 Identities=10% Similarity=0.056 Sum_probs=74.7
Q ss_pred CCHHHHH--------HHHHHHH-HCCCCcccc--------------------ccCCCCCcHH---HHHHHH---Hhc-CC
Q 024050 38 VSEEDGI--------SMIKHAF-SKGITFFDT--------------------ADVYGQNANE---VLLGKA---LKQ-LP 81 (273)
Q Consensus 38 ~~~~~~~--------~~l~~A~-~~Gin~~Dt--------------------A~~Yg~g~se---~~lg~~---l~~-~~ 81 (273)
++.+|.. +..+.|. ++|+..++. .+.||.-.-| +++-+. +++ ..
T Consensus 163 lt~~eI~~~~i~~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg 242 (379)
T 3aty_A 163 LTDDEVRDGIIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVG 242 (379)
T ss_dssp CCHHHHHHTHHHHHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcC
Confidence 5666666 4455667 899988774 3456520222 222222 332 22
Q ss_pred CCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec
Q 024050 82 REKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL 161 (273)
Q Consensus 82 r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv 161 (273)
.+ .|..|+.+..... ......+.+.. ..+-+.|+..|+|||++-.=.......+. + +.++++.=.+--|++
T Consensus 243 ~~--~v~vRis~~~~~~-~~~~~~~~~~~-~~la~~l~~~Gvd~i~v~~~~~~~~~~~~----~-~~~ir~~~~iPvi~~ 313 (379)
T 3aty_A 243 SD--RVGLRISPLNGVH-GMIDSNPEALT-KHLCKKIEPLSLAYLHYLRGDMVNQQIGD----V-VAWVRGSYSGVKISN 313 (379)
T ss_dssp GG--GEEEEECTTCCGG-GCCCSCHHHHH-HHHHHHHGGGCCSEEEEECSCTTSCCCCC----H-HHHHHTTCCSCEEEE
T ss_pred CC--eEEEEECcccccc-cCCCCCCHHHH-HHHHHHHHHhCCCEEEEcCCCcCCCCccH----H-HHHHHHHCCCcEEEE
Confidence 23 3778887643100 00011223333 34556678888777766431100011121 4 556666556667788
Q ss_pred CCCCHHHHHHHhhcCCceEEee
Q 024050 162 SEASPGTIRRAHAVHPITAVQM 183 (273)
Q Consensus 162 S~~~~~~l~~~~~~~~~~~~q~ 183 (273)
..++++..+++++....+.+++
T Consensus 314 G~it~~~a~~~l~~g~aD~V~i 335 (379)
T 3aty_A 314 LRYDFEEADQQIREGKVDAVAF 335 (379)
T ss_dssp SSCCHHHHHHHHHTTSCSEEEE
T ss_pred CCCCHHHHHHHHHcCCCeEEEe
Confidence 7788999999998877777776
No 193
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=41.77 E-value=1.8e+02 Score=25.54 Aligned_cols=169 Identities=12% Similarity=0.110 Sum_probs=98.4
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCC-------CCc-------HHHHHHHHHhc----CCCCCEEEEeccCcCCCCCcc
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYG-------QNA-------NEVLLGKALKQ----LPREKIQVATKFGIAGIGVAG 100 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg-------~g~-------se~~lg~~l~~----~~r~~~~i~tK~~~~~~~~~~ 100 (273)
.++...++-+..+++|-+.|.|..+.. .|. .+++..++++- ......+|+-=+++...
T Consensus 52 ~Pe~V~~iH~~Yl~AGAdII~TNTf~A~~~~l~~~G~~~~~~~~~~eln~~Av~LAreAa~~~~~~VAGsIGP~g~---- 127 (406)
T 1lt8_A 52 HPEAVRQLHREFLRAGSNVMQTFTFYASEDKLENRGNYVLEKISGQEVNEAAADIARQVADEGDALVAGGVSQTPS---- 127 (406)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSCTTCSSCC-------------CHHHHHHHHHHHHHHHTTTTCEEEEEECCCHH----
T ss_pred CHHHHHHHHHHHHHhCccceeccccccCHHHHHhcCCccchhHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCCccc----
Confidence 356668888888999999999886543 121 23444444431 12234678777776541
Q ss_pred ccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecC--------CCCHHHHHHH
Q 024050 101 VIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS--------EASPGTIRRA 172 (273)
Q Consensus 101 ~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS--------~~~~~~l~~~ 172 (273)
.....+.+.+.+...+..+.|--..+|++++.-. .+..|+..+++.+++.|+=-.+-++ ..++......
T Consensus 128 ~l~~~s~eel~~~~~eqi~~L~~~GvDlll~ETi---~~~~Eakaa~~a~~~~~lPv~iS~T~~~~G~l~G~~~~~~~~~ 204 (406)
T 1lt8_A 128 YLSAKSETEVKKVFLQQLEVFMKKNVDFLIAEYF---EHVEEAVWAVETLIASGKPVAATMAIGPEGDLHGVPPGEAAVR 204 (406)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHHTCSEEEECCC---SCHHHHHHHHHHHGGGTSCEEEEECCBTTBCTTCCCHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHhhCCCCEEEEccc---CCHHHHHHHHHHHHHhCCcEEEEEEECCCCCcCCCcHHHHHHH
Confidence 1123556777777777776664467999999865 3456666666666666753333333 3344444444
Q ss_pred hhcCCceEEeeecccccccccccHHHHHHHh------CCeEEecccCCCc
Q 024050 173 HAVHPITAVQMEWSLWTRDIEEEIIPLCREL------GIGIVPYSPLGRG 216 (273)
Q Consensus 173 ~~~~~~~~~q~~~~l~~~~~~~~l~~~~~~~------gi~v~a~spl~~G 216 (273)
+....++.+-++++.--.. -..+++..++. ++.+++| |.+++
T Consensus 205 l~~~~~~avGvNC~~gP~~-~~~~l~~l~~~~~~~g~~~pl~vy-PNag~ 252 (406)
T 1lt8_A 205 LVKAGASIIGVNCHFDPTI-SLKTVKLMKEGLEAAQLKAHLMSQ-PLAYH 252 (406)
T ss_dssp HHTTTCSEEEEESSSCHHH-HHHHHHHHHHHHHTTTCCCEEEEE-CCSBC
T ss_pred hhcCCCCEEEecCCCCHHH-HHHHHHHHHHhhhhcCCCccEEEe-cCCCC
Confidence 4444577777777532111 13444444433 6788887 66644
No 194
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=41.66 E-value=83 Score=24.87 Aligned_cols=149 Identities=12% Similarity=0.074 Sum_probs=81.7
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.+.+.++++.|++.|+...|.-...= -..-..+|+... +.++++..=. .+.+.+++.++...
T Consensus 17 d~~~~~~~~~~al~~g~~~~~ii~~~l-~p~m~~VG~lw~---~g~i~v~q~~-------------~aa~~~~~~l~~l~ 79 (215)
T 3ezx_A 17 NVAGTPELCKEALAAGVPALDIITKGL-SVGMKIVGDKFE---AAEIFLPQIM-------------MSGKAMSNAMEVLT 79 (215)
T ss_dssp CTTHHHHHHHHHHHTTCCHHHHHHHTH-HHHHHHHHHHHH---TTSSCHHHHH-------------HHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCHHHHHHHHH-HHHHHHHHHHHh---CCCCcHHHHH-------------HHHHHHHHHHHHHH
Confidence 678899999999999988666543210 013455666555 2332221110 11233334443333
Q ss_pred HHcCC-----CcccEEEecCCCCCCCHHHHHHHHHHHHHcCC-ccEEecCCCCHHHHHHHhhcCCceEEee--ecccccc
Q 024050 119 KRLDV-----DYIDLYYQHRVDTSVPIEETIGEMKKLVEEGK-IKYIGLSEASPGTIRRAHAVHPITAVQM--EWSLWTR 190 (273)
Q Consensus 119 ~~L~~-----d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~-ir~iGvS~~~~~~l~~~~~~~~~~~~q~--~~~l~~~ 190 (273)
..+.. ..---+++..+..+...-...=.-.-|...|. |-++|.+ .+++.+.++.....++++-+ ...+-..
T Consensus 80 ~~l~~~~~~~~~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~-vp~e~iv~~~~~~~~d~v~l~~S~l~~~~ 158 (215)
T 3ezx_A 80 PELEKNKKEGEEAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVD-VLNENVVEEAAKHKGEKVLLVGSALMTTS 158 (215)
T ss_dssp HHHTSSCCC---CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSS-CCHHHHHHHHHHTTTSCEEEEEECSSHHH
T ss_pred HHhhhcccCCCCCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCC-CCHHHHHHHHHHcCCCEEEEEchhcccCc
Confidence 33332 12234555555555443333333345778886 6788984 46777766666666777777 4433322
Q ss_pred ccc-ccHHHHHHHhCC
Q 024050 191 DIE-EEIIPLCRELGI 205 (273)
Q Consensus 191 ~~~-~~l~~~~~~~gi 205 (273)
... .++++.+++.|.
T Consensus 159 ~~~~~~~i~~l~~~~~ 174 (215)
T 3ezx_A 159 MLGQKDLMDRLNEEKL 174 (215)
T ss_dssp HTHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCC
Confidence 211 778899998875
No 195
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=40.58 E-value=1.6e+02 Score=24.53 Aligned_cols=143 Identities=11% Similarity=-0.024 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHHHCCCCccccccCCCC--C--cHHHHHHHHHhc-----CCCCCEEEEeccCcCCCCCccccccCCHHHH
Q 024050 40 EEDGISMIKHAFSKGITFFDTADVYGQ--N--ANEVLLGKALKQ-----LPREKIQVATKFGIAGIGVAGVIVKGAPDYV 110 (273)
Q Consensus 40 ~~~~~~~l~~A~~~Gin~~DtA~~Yg~--g--~se~~lg~~l~~-----~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i 110 (273)
.++..+.+..+++.+.+ .|+. | .-++.+.+++.. ...+++++++= .
T Consensus 44 ~~~v~~a~~~~~~~~~~------~y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~~~g----------------~--- 98 (370)
T 2z61_A 44 PKPIVDEGIKSLKEGKT------HYTDSRGILELREKISELYKDKYKADIIPDNIIITGG----------------S--- 98 (370)
T ss_dssp CHHHHHHHHHHHHTTCC------SCCCTTCCHHHHHHHHHHHHHHSSCCCCGGGEEEESS----------------H---
T ss_pred CHHHHHHHHHHHHcCcc------CCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEECCC----------------h---
Confidence 46778888888887643 3432 2 355677777753 23455555431 1
Q ss_pred HHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhc-CCceEEeeeccccc
Q 024050 111 RSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV-HPITAVQMEWSLWT 189 (273)
Q Consensus 111 ~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~-~~~~~~q~~~~l~~ 189 (273)
.+++...++.+ ++.=|-+++..|... ..... ++..| ++-+.+. .+.+.++++++. .+..++..+.|+.-
T Consensus 99 ~~a~~~~~~~~-~~~gd~vl~~~p~~~----~~~~~---~~~~g-~~~~~v~-~d~~~l~~~l~~~~~~v~~~~p~nptG 168 (370)
T 2z61_A 99 SLGLFFALSSI-IDDGDEVLIQNPCYP----CYKNF---IRFLG-AKPVFCD-FTVESLEEALSDKTKAIIINSPSNPLG 168 (370)
T ss_dssp HHHHHHHHHHH-CCTTCEEEEESSCCT----HHHHH---HHHTT-CEEEEEC-SSHHHHHHHCCSSEEEEEEESSCTTTC
T ss_pred HHHHHHHHHHh-cCCCCEEEEeCCCch----hHHHH---HHHcC-CEEEEeC-CCHHHHHHhcccCceEEEEcCCCCCcC
Confidence 12333333333 222266777776542 12222 22333 2334444 678888887753 22333333444332
Q ss_pred cccc-ccHHHHHHHhCCeEEecccCCCccC
Q 024050 190 RDIE-EEIIPLCRELGIGIVPYSPLGRGFF 218 (273)
Q Consensus 190 ~~~~-~~l~~~~~~~gi~v~a~spl~~G~L 218 (273)
.... . +.++|+++|+-++.=...+.+..
T Consensus 169 ~~~~~~-l~~~~~~~~~~li~De~~~~~~~ 197 (370)
T 2z61_A 169 EVIDRE-IYEFAYENIPYIISDEIYNGLVY 197 (370)
T ss_dssp CCCCHH-HHHHHHHHCSEEEEECTTTTCBS
T ss_pred cccCHH-HHHHHHHcCCEEEEEcchhhccc
Confidence 2111 4 99999999999997666554443
No 196
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=40.28 E-value=1.7e+02 Score=24.84 Aligned_cols=25 Identities=8% Similarity=0.044 Sum_probs=22.2
Q ss_pred CCCHHHHHHHHHHHHHCCCCccccc
Q 024050 37 PVSEEDGISMIKHAFSKGITFFDTA 61 (273)
Q Consensus 37 ~~~~~~~~~~l~~A~~~Gin~~DtA 61 (273)
.++.++..++++...+.|+..|+..
T Consensus 26 ~~~~e~k~~i~~~L~~~Gvd~IEvG 50 (345)
T 1nvm_A 26 QYTLDDVRAIARALDKAKVDSIEVA 50 (345)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEECS
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 4588999999999999999999995
No 197
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=39.63 E-value=1.8e+02 Score=24.88 Aligned_cols=150 Identities=12% Similarity=-0.027 Sum_probs=80.1
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCC--cHHHHHHHHHhc-----CCCCCEEEEeccCcCCCCCccccccCCHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQN--ANEVLLGKALKQ-----LPREKIQVATKFGIAGIGVAGVIVKGAPDYVR 111 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g--~se~~lg~~l~~-----~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~ 111 (273)
..+++.+.+..+++.+.. .|+.. .-++.+.+++.+ ...+++++++= ..
T Consensus 75 ~~~~v~~a~~~~~~~~~~------~y~~~~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g-------------------~~ 129 (421)
T 3l8a_A 75 PVPEIKEAIINYGREHIF------GYNYFNDDLYQAVIDWERKEHDYAVVKEDILFIDG-------------------VV 129 (421)
T ss_dssp CCHHHHHHHHHHHHHCCS------SCBCCCHHHHHHHHHHHHHHHCCCCCGGGEEEESC-------------------HH
T ss_pred CCHHHHHHHHHHHhcCCc------CCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEcCC-------------------HH
Confidence 356778888888876543 23321 234556666653 23455555431 12
Q ss_pred HHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecC--C----CCHHHHHHHhhc--CCceEEee
Q 024050 112 SCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS--E----ASPGTIRRAHAV--HPITAVQM 183 (273)
Q Consensus 112 ~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS--~----~~~~~l~~~~~~--~~~~~~q~ 183 (273)
++++..++.+ +..=|-+++..|.. ......+..+ ...+..+-+. + .+.+.++++++. ....++..
T Consensus 130 ea~~~a~~~~-~~~gd~Vi~~~~~y----~~~~~~~~~~--g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~ 202 (421)
T 3l8a_A 130 PAISIALQAF-SEKGDAVLINSPVY----YPFARTIRLN--DHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCS 202 (421)
T ss_dssp HHHHHHHHHH-SCTEEEEEEEESCC----HHHHHHHHHT--TEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEES
T ss_pred HHHHHHHHHh-cCCCCEEEECCCCc----HHHHHHHHHC--CCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECC
Confidence 3344444444 23336666665543 2223322221 2344555543 1 478889888763 33334444
Q ss_pred ecccccc----cccccHHHHHHHhCCeEEecccCCCccCCC
Q 024050 184 EWSLWTR----DIEEEIIPLCRELGIGIVPYSPLGRGFFGG 220 (273)
Q Consensus 184 ~~~l~~~----~~~~~l~~~~~~~gi~v~a~spl~~G~L~~ 220 (273)
+.|+.-. ..-.++.+.|+++|+-++.=...+....++
T Consensus 203 p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g 243 (421)
T 3l8a_A 203 PHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFG 243 (421)
T ss_dssp SBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTT
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCC
Confidence 4454322 122789999999999999766665444443
No 198
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=39.45 E-value=1.9e+02 Score=25.08 Aligned_cols=152 Identities=11% Similarity=0.121 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHHHCCCCccccccCCC--------CCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHH
Q 024050 40 EEDGISMIKHAFSKGITFFDTADVYG--------QNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVR 111 (273)
Q Consensus 40 ~~~~~~~l~~A~~~Gin~~DtA~~Yg--------~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~ 111 (273)
.+.+.++.+...+.|++.|-.--.-. .++..+.+ +++++.-..++-|...... .++.+...
T Consensus 148 ~~~~~~~~~~~~~~Gf~~~K~KvG~~~~~d~~~~~~~~~~~v-~avReavG~d~~l~vDaN~----------~~~~~~A~ 216 (388)
T 3tcs_A 148 RDEAERLKRLRDTQGFTAFKVRAGAEVGRNRDEWPGRTEEII-PTMRRELGDDVDLLIDANS----------CYTPDRAI 216 (388)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEECSCTTCTTCCSSTTHHHHHH-HHHHHHHCSSSEEEEECTT----------CCCHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEccCCCcccccccchhHHHHHH-HHHHHHhCCCCeEEEeCCC----------CcCHHHHH
Confidence 34455555555688998775432111 11223333 3455421234455555332 13444433
Q ss_pred HHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeecccccc
Q 024050 112 SCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTR 190 (273)
Q Consensus 112 ~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~ 190 (273)
+ +-+.|+.+++ .++..|-+.. .++.+.++++.-.|. ..|=+-++...+.++++....+++|+..+-.--
T Consensus 217 ~-~~~~l~~~~i-----~~iEeP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~GG 286 (388)
T 3tcs_A 217 E-VGHMLQDHGF-----CHFEEPCPYW----ELAQTKQVTDALDIDVTGGEQDCDLPTWQRMIDMRAVDIVQPDILYLGG 286 (388)
T ss_dssp H-HHHHHHHTTC-----CEEECCSCTT----CHHHHHHHHHHCSSCEEECTTCCCHHHHHHHHHHTCCSEECCCHHHHTS
T ss_pred H-HHHHHhhcCC-----eEEECCCCcc----CHHHHHHHHHhcCCCEEcCCccCCHHHHHHHHHcCCCCEEEeCccccCC
Confidence 3 2345566654 4455664332 356677777664443 344466888899999988888899987665432
Q ss_pred ccc-ccHHHHHHHhCCeEEeccc
Q 024050 191 DIE-EEIIPLCRELGIGIVPYSP 212 (273)
Q Consensus 191 ~~~-~~l~~~~~~~gi~v~a~sp 212 (273)
-.+ ..+...|+.+|+.+...+.
T Consensus 287 it~a~kia~~A~~~gv~~~~h~~ 309 (388)
T 3tcs_A 287 ICRTLRVVEMARAAGLPVTPHCA 309 (388)
T ss_dssp HHHHHHHHHHHHHTTCCBCCCCC
T ss_pred HHHHHHHHHHHHHcCCEEEecCC
Confidence 111 6789999999999987654
No 199
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=39.38 E-value=1.7e+02 Score=24.38 Aligned_cols=25 Identities=12% Similarity=0.141 Sum_probs=22.1
Q ss_pred CCHHHHHHHHHHHHHCCCCcccccc
Q 024050 38 VSEEDGISMIKHAFSKGITFFDTAD 62 (273)
Q Consensus 38 ~~~~~~~~~l~~A~~~Gin~~DtA~ 62 (273)
++.++..++++...+.|+..|+...
T Consensus 24 ~~~~~K~~i~~~L~~~Gv~~IE~g~ 48 (293)
T 3ewb_X 24 FDVKEKIQIALQLEKLGIDVIEAGF 48 (293)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 4789999999999999999999874
No 200
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=39.22 E-value=2e+02 Score=25.21 Aligned_cols=100 Identities=12% Similarity=0.048 Sum_probs=57.0
Q ss_pred HHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHH-HHHcCCccEEecCCCCHHHHHHHhhc-CCceEEeeecccccc
Q 024050 113 CCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKK-LVEEGKIKYIGLSEASPGTIRRAHAV-HPITAVQMEWSLWTR 190 (273)
Q Consensus 113 ~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~-l~~~G~ir~iGvS~~~~~~l~~~~~~-~~~~~~q~~~~l~~~ 190 (273)
++...+..+ +..=|-+++..+.. ..++..+.. +...| ++.+-+...+++.++++++. .+..++..+.|+.-.
T Consensus 109 Ai~~al~al-~~~Gd~Vi~~~~~y----~~~~~~~~~~~~~~G-~~~~~v~~~d~~~l~~ai~~~t~~v~~e~p~NptG~ 182 (430)
T 3ri6_A 109 AISTAILTL-ARAGDSVVTTDRLF----GHTLSLFQKTLPSFG-IEVRFVDVMDSLAVEHACDETTKLLFLETISNPQLQ 182 (430)
T ss_dssp HHHHHHHHH-CCTTCEEEEETTCC----HHHHHHHHTHHHHTT-CEEEEECTTCHHHHHHHCCTTEEEEEEESSCTTTCC
T ss_pred HHHHHHHHH-hCCCCEEEEcCCCc----hhHHHHHHHHHHHcC-CEEEEeCCCCHHHHHHhhCCCCeEEEEECCCCCCCe
Confidence 344444433 23336666655533 344444442 33334 33344444478888887754 344555556666544
Q ss_pred ccc-ccHHHHHHHhCCeEEecccCCCccC
Q 024050 191 DIE-EEIIPLCRELGIGIVPYSPLGRGFF 218 (273)
Q Consensus 191 ~~~-~~l~~~~~~~gi~v~a~spl~~G~L 218 (273)
... .++.+.|+++|+.++.=..++.|.+
T Consensus 183 ~~dl~~i~~la~~~g~~livD~a~~~~~~ 211 (430)
T 3ri6_A 183 VADLEALSKVVHAKGIPLVVDTTMTPPYL 211 (430)
T ss_dssp CCCHHHHHHHHHTTTCCEEEECTTSCTTT
T ss_pred ecCHHHHHHHHHHcCCEEEEECCCccccc
Confidence 322 7899999999999997766665554
No 201
>4h2h_A Mandelate racemase/muconate lactonizing enzyme; enolase, mandelate racemase subgroup, enzyme function initia EFI, structural genomics; HET: 0XW; 1.70A {Pelagibaca bermudensis} PDB: 2pmq_A*
Probab=39.06 E-value=1.9e+02 Score=24.87 Aligned_cols=152 Identities=10% Similarity=0.021 Sum_probs=87.1
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHH---HHHHHHHhc-CCCCCEEEEeccCcCCCCCccccccCCHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANE---VLLGKALKQ-LPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCC 114 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se---~~lg~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~ 114 (273)
+.++..+....+.+.|++.|=.=- |.+.-+ +.+. .+++ ..-+++-|..=... .++.+...+
T Consensus 150 ~~~~~~~~a~~~~~~G~~~~KiKv--g~~~~~~di~~v~-~vr~a~~g~~~~l~vDaN~----------~~~~~~A~~-- 214 (376)
T 4h2h_A 150 EPDEAARQALEKQREGYSRLQVKL--GARPIEIDIEAIR-KVWEAVRGTGIALAADGNR----------GWTTRDALR-- 214 (376)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEC--CSSCHHHHHHHHH-HHHHHHTTSCCEEEEECTT----------CCCHHHHHH--
T ss_pred CHHHHHHHHHHHHhcCceEEEEec--CCCCHHHHHHHHH-HHHhhccCCeeEEEEeecc----------CCCHHHHHH--
Confidence 577777778888889998664321 111112 2222 2322 22234433332211 234443332
Q ss_pred HHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCc-cEEecCCCCHHHHHHHhhcCCceEEeeeccccccccc
Q 024050 115 EASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE 193 (273)
Q Consensus 115 ~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~ 193 (273)
.++.| +..++ ++..|-. + ++.+.++++.-.+ -..|=|.++...+.++++..-++++|+...-.---.+
T Consensus 215 --~~~~l--~~~~~-~iEeP~~--~----~~~~~~l~~~~~~pia~dE~~~~~~~~~~~~~~~~~d~v~~d~~~~GGit~ 283 (376)
T 4h2h_A 215 --FSREC--PDIPF-VMEQPCN--S----FEDLEAIRPLCHHALYMDEDGTSLNTVITAAATSLVDGFGMKVSRIGGLQH 283 (376)
T ss_dssp --HHHHC--TTSCE-EEESCSS--S----HHHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTTCCSEECCBHHHHTSHHH
T ss_pred --HHHHH--hhccc-cccCCcc--h----hhhHhhhhhcccCccccCcccCCHHHHHHHHHhhccCccccccceeCCcHH
Confidence 34455 34455 5666632 1 4456666665443 2345566888889998888888888886654322111
Q ss_pred -ccHHHHHHHhCCeEEecccCCCc
Q 024050 194 -EEIIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 194 -~~l~~~~~~~gi~v~a~spl~~G 216 (273)
..+...|+.+|+.+...+.+.++
T Consensus 284 ~~~ia~~a~~~gi~~~~~~~~~~~ 307 (376)
T 4h2h_A 284 MRAFRDFCAARNLPHTCDDAWGGD 307 (376)
T ss_dssp HHHHHHHHHHHTCCEECBCSSCSH
T ss_pred HHHHHHHHHHcCCCEEeCCCCccH
Confidence 56889999999999987776654
No 202
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=38.98 E-value=1.8e+02 Score=24.63 Aligned_cols=105 Identities=10% Similarity=0.114 Sum_probs=58.2
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHH---HHHHHHHHHHHcCCccEEecC---CCCHHHHHHHhhc--C
Q 024050 105 GAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIE---ETIGEMKKLVEEGKIKYIGLS---EASPGTIRRAHAV--H 176 (273)
Q Consensus 105 ~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~---~~~~~L~~l~~~G~ir~iGvS---~~~~~~l~~~~~~--~ 176 (273)
++.+. +..+-+.|.++|+++|.+-..-+|....... ..|+.|..+++.-.++.-.+. |..++.++++... .
T Consensus 21 ~~~~~-k~~ia~~L~~aGv~~IEvg~~~~p~~~f~~~~~~~~~e~l~~i~~~~~~~~~~L~r~~~~~~~dv~~~~~a~~~ 99 (320)
T 3dxi_A 21 FNSKI-VDAYILAMNELPIDYLEVGYRNKPSKEYMGKFGYTPVSVLKHLRNISTKKIAIMLNEKNTTPEDLNHLLLPIIG 99 (320)
T ss_dssp CCHHH-HHHHHHHHHTTTCCEEEEEECCSCCSSCCCHHHHCCHHHHHHHHHHCCSEEEEEEEGGGCCGGGHHHHHGGGTT
T ss_pred CCHHH-HHHHHHHHHHhCCCEEEEecccCCccccccccccChHHHHHHHhhccCCeEEEEecCCCCChhhHHHHHHhhhc
Confidence 44443 4456667888999999999886554321100 014555555444445555543 2334445554321 3
Q ss_pred CceEEeeecccccccccccHHHHHHHhCCeEEec
Q 024050 177 PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPY 210 (273)
Q Consensus 177 ~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~ 210 (273)
.++.+.+..++-+-+.-.+.+++++++|+.|...
T Consensus 100 Gvd~~ri~~~~~nle~~~~~v~~ak~~G~~v~~~ 133 (320)
T 3dxi_A 100 LVDMIRIAIDPQNIDRAIVLAKAIKTMGFEVGFN 133 (320)
T ss_dssp TCSEEEEEECGGGHHHHHHHHHHHHTTTCEEEEE
T ss_pred CCCEEEEEecHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 4555555443322111166888899999988764
No 203
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=38.82 E-value=1.7e+02 Score=24.50 Aligned_cols=141 Identities=8% Similarity=-0.024 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHHCCCCccccccCCCC--C--cHHHHHHHHHhc-----CCCCCEEEEeccCcCCCCCccccccCCHHHH
Q 024050 40 EEDGISMIKHAFSKGITFFDTADVYGQ--N--ANEVLLGKALKQ-----LPREKIQVATKFGIAGIGVAGVIVKGAPDYV 110 (273)
Q Consensus 40 ~~~~~~~l~~A~~~Gin~~DtA~~Yg~--g--~se~~lg~~l~~-----~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i 110 (273)
.+++.+.+..+++.+.. .|++ | .-.+.+.+++.+ ...+++++++= .
T Consensus 46 ~~~v~~a~~~~~~~~~~------~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~v~~t~g----------------~--- 100 (391)
T 3h14_A 46 PRGAVEALAKSLETDAL------GYTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPG----------------S--- 100 (391)
T ss_dssp CHHHHHHHHHHHC----------------CCHHHHHHHHHHHHHHHCCCCCGGGEEEESS----------------H---
T ss_pred CHHHHHHHHHHHhcCCC------CCCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEecC----------------h---
Confidence 45677777777776532 3331 1 344566666642 24456655431 1
Q ss_pred HHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcC-CccEEecC---CC--CHHHHHHHhhcCCceEEeee
Q 024050 111 RSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEG-KIKYIGLS---EA--SPGTIRRAHAVHPITAVQME 184 (273)
Q Consensus 111 ~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G-~ir~iGvS---~~--~~~~l~~~~~~~~~~~~q~~ 184 (273)
.+++...++.+ ++.=|-+++..|.. ......+. ..| ++..+-+. ++ +++.++++ .....++..+
T Consensus 101 ~~al~~~~~~l-~~~gd~vl~~~p~~----~~~~~~~~---~~g~~~~~v~~~~~~~~~~d~~~l~~~--~~~~v~i~~p 170 (391)
T 3h14_A 101 SGGFLLAFTAL-FDSGDRVGIGAPGY----PSYRQILR---ALGLVPVDLPTAPENRLQPVPADFAGL--DLAGLMVASP 170 (391)
T ss_dssp HHHHHHHHHHH-CCTTCEEEEEESCC----HHHHHHHH---HTTCEEEEEECCGGGTTSCCHHHHTTS--CCSEEEEESS
T ss_pred HHHHHHHHHHh-cCCCCEEEEcCCCC----ccHHHHHH---HcCCEEEEeecCcccCCCCCHHHHHhc--CCeEEEECCC
Confidence 12333333333 12235666655543 22222222 233 45555554 22 56666554 3344455455
Q ss_pred ccccccc----ccccHHHHHHHhCCeEEecccCCC
Q 024050 185 WSLWTRD----IEEEIIPLCRELGIGIVPYSPLGR 215 (273)
Q Consensus 185 ~~l~~~~----~~~~l~~~~~~~gi~v~a~spl~~ 215 (273)
.|+.-.. ...++.+.|+++|+-++.=...+.
T Consensus 171 ~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~ 205 (391)
T 3h14_A 171 ANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHG 205 (391)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTT
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchh
Confidence 5543221 127789999999999996555543
No 204
>3v5c_A Mandelate racemase/muconate lactonizing protein; enolase fold, galacturonate dehydratase, double Mg site, LYA; 1.53A {Paenibacillus SP} PDB: 3v5f_A* 3p3b_A* 3ops_A* 3n4f_A* 3qpe_A*
Probab=38.79 E-value=1.9e+02 Score=25.02 Aligned_cols=88 Identities=14% Similarity=0.045 Sum_probs=57.8
Q ss_pred HHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHH------cCCccEEecCCCCHHHHHHHhhcCCceEEeeeccccc
Q 024050 116 ASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVE------EGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWT 189 (273)
Q Consensus 116 ~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~------~G~ir~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~ 189 (273)
+.+++|. .+++.++..|-. .+ ++.+.+|++ .+.--+.|=+.+ ...+.++++...++++|+..+- -
T Consensus 219 ~~~~~L~--~~~l~~iEeP~~-~d----~~~~~~l~~~~~~~~~~ipIa~gE~~~-~~~~~~li~~~a~dii~~d~~~-G 289 (392)
T 3v5c_A 219 EVLAALS--DVNLYWLEAAFH-ED----EALYEDLKEWLGQRGQNVLIADGEGLA-SPHLIEWATRGRVDVLQYDIIW-P 289 (392)
T ss_dssp HHHHHTT--TSCCCEEECSSS-CC----HHHHHHHHHHHHHHTCCCEEEECCSSC-CTTHHHHHHTTSCCEECCBTTT-B
T ss_pred HHHHhcc--cCCCeEEeCCCC-cC----HHHHHHHHHhhccCCCCCcEECCCccc-HHHHHHHHHcCCCcEEEeCCCC-C
Confidence 3444553 457888888865 22 334455544 244445566666 6678888888888999998874 2
Q ss_pred cccc-ccHHHHHHHhCCeEEeccc
Q 024050 190 RDIE-EEIIPLCRELGIGIVPYSP 212 (273)
Q Consensus 190 ~~~~-~~l~~~~~~~gi~v~a~sp 212 (273)
--.+ ..+...|+.+|+.+...++
T Consensus 290 Gitea~kia~~A~~~gv~~~~h~~ 313 (392)
T 3v5c_A 290 GFTHWMELGEKLDAHGLRSAPHCY 313 (392)
T ss_dssp CHHHHHHHHHHHHHTTCEECCBCC
T ss_pred CHHHHHHHHHHHHHcCCeEEecCC
Confidence 1111 6788999999999987664
No 205
>4f0h_B Ribulose bisphosphate carboxylase small chain; alpha beta domain, catalytic domain TIM barrel, carboxylase/oxygenase, nitrosylation; 1.96A {Galdieria sulphuraria} PDB: 4f0k_B 4f0m_B 1iwa_B 1bwv_S*
Probab=38.45 E-value=1.2e+02 Score=22.40 Aligned_cols=83 Identities=16% Similarity=0.055 Sum_probs=56.3
Q ss_pred ceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCC-ccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccc
Q 024050 23 LGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGIT-FFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGV 101 (273)
Q Consensus 23 lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin-~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~ 101 (273)
|..||.++ =.++++++..+.|++++..|.+ .+.-++. + .+|...+-+-|++...
T Consensus 3 ~t~~tfSy----LP~ltd~qI~kQI~YlL~qGw~~~iEf~d~-~--------------~~r~~yW~mWkLPmFg------ 57 (138)
T 4f0h_B 3 ITQGTFSF----LPDLTDEQIKKQIDYMISKKLAIGIEYTND-I--------------HPRNSFWEMWGLPLFE------ 57 (138)
T ss_dssp CCCSTTTT----SCCCCHHHHHHHHHHHHHTTCEEEEEEESC-C--------------CTTCCCCEESSCCBCS------
T ss_pred cccccccc----CCCCCHHHHHHHHHHHHhCCCEEEEEeCCC-C--------------CCcCCEEeecCCCCcC------
Confidence 55677664 3356899999999999999975 2222211 1 3566777777755433
Q ss_pred cccCCHHHHHHHHHHHHHHcCCCcccEEEec
Q 024050 102 IVKGAPDYVRSCCEASLKRLDVDYIDLYYQH 132 (273)
Q Consensus 102 ~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh 132 (273)
..++..+...|++.++.---.||-|+-+.
T Consensus 58 --~~d~~~Vl~Ele~C~k~~p~~YVRliGfD 86 (138)
T 4f0h_B 58 --VTDPAPVLFEINACRKAKSNFYIKVVGFS 86 (138)
T ss_dssp --CCSHHHHHHHHHHHHHHTTTSEEEEEEEE
T ss_pred --CCCHHHHHHHHHHHHHHCCCCeEEEEEEe
Confidence 34688999999999998876666555444
No 206
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=38.20 E-value=54 Score=28.73 Aligned_cols=88 Identities=9% Similarity=0.080 Sum_probs=58.4
Q ss_pred HHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-
Q 024050 116 ASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE- 193 (273)
Q Consensus 116 ~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~- 193 (273)
+.|+.+++ .+++.|-... .++.+.++++.-.|- ..|=|-++++.++++++....+++|+..+-.---.+
T Consensus 231 ~~L~~~~i-----~~iEeP~~~~----~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~d~~~~GGit~~ 301 (400)
T 4dxk_A 231 KALTPYQT-----FWHEDPIKMD----SLSSLTRYAAVSPAPISASETLGSRWAFRDLLETGAAGVVMLDISWCGGLSEA 301 (400)
T ss_dssp HHTGGGCC-----SEEECCBCTT----SGGGHHHHHHHCSSCEEECTTCCHHHHHHHHHHTTCCCEEEECTTTTTHHHHH
T ss_pred HHHhhcCC-----CEEEcCCCcc----cHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHH
Confidence 34555554 4445554322 345667777765554 233355778889999998889999998777542111
Q ss_pred ccHHHHHHHhCCeEEeccc
Q 024050 194 EEIIPLCRELGIGIVPYSP 212 (273)
Q Consensus 194 ~~l~~~~~~~gi~v~a~sp 212 (273)
..+...|+.+|+.++..++
T Consensus 302 ~kia~~A~~~gi~~~~h~~ 320 (400)
T 4dxk_A 302 RKIASMAEAWHLPVAPHXC 320 (400)
T ss_dssp HHHHHHHHHTTCCEEEC-C
T ss_pred HHHHHHHHHcCCEEEecCC
Confidence 6789999999999988754
No 207
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=38.20 E-value=1.9e+02 Score=24.84 Aligned_cols=63 Identities=11% Similarity=-0.021 Sum_probs=38.8
Q ss_pred HHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcCCceEEee
Q 024050 112 SCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQM 183 (273)
Q Consensus 112 ~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~q~ 183 (273)
..+-+.|+..|+|||++ |...... +. +.++++.=.+--|++..++++..+++++....+.+.+
T Consensus 253 ~~la~~l~~~Gvd~i~v---~~~~~~~---~~---~~~ik~~~~iPvi~~Ggit~e~a~~~l~~G~aD~V~i 315 (361)
T 3gka_A 253 GHVARELGRRRIAFLFA---RESFGGD---AI---GQQLKAAFGGPFIVNENFTLDSAQAALDAGQADAVAW 315 (361)
T ss_dssp HHHHHHHHHTTCSEEEE---ECCCSTT---CC---HHHHHHHHCSCEEEESSCCHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHHcCCCEEEE---CCCCCCH---HH---HHHHHHHcCCCEEEeCCCCHHHHHHHHHcCCccEEEE
Confidence 44566778888766665 4443211 12 2333333235567777788899999888877776665
No 208
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=38.03 E-value=1.3e+02 Score=25.13 Aligned_cols=86 Identities=14% Similarity=0.164 Sum_probs=58.3
Q ss_pred HcCCCcccEEEec-CCC-----CCCCHHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcCCceEEeeeccccccccc
Q 024050 120 RLDVDYIDLYYQH-RVD-----TSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE 193 (273)
Q Consensus 120 ~L~~d~iDl~~lh-~~~-----~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~ 193 (273)
.-|-|.||+---- +|. ..+.++.+...++.+++.+. -|.|-+++++.++++++...-.+ +..|.. . .
T Consensus 63 ~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~~v--piSIDT~~~~Va~aAl~aGa~iI--NdVsg~-~--d 135 (294)
T 2dqw_A 63 AEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSLGV--PVSVDTRKPEVAEEALKLGAHLL--NDVTGL-R--D 135 (294)
T ss_dssp HHTCSEEEEECC-----------CCHHHHHHHHHHHHHTTCS--CEEEECSCHHHHHHHHHHTCSEE--ECSSCS-C--C
T ss_pred HCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhCCC--eEEEECCCHHHHHHHHHhCCCEE--EECCCC-C--C
Confidence 3578999987632 332 23335566777777776643 37888999999999998854433 334444 2 2
Q ss_pred ccHHHHHHHhCCeEEeccc
Q 024050 194 EEIIPLCRELGIGIVPYSP 212 (273)
Q Consensus 194 ~~l~~~~~~~gi~v~a~sp 212 (273)
.++++.++++|..++.+..
T Consensus 136 ~~m~~v~a~~~~~vVlmh~ 154 (294)
T 2dqw_A 136 ERMVALAARHGVAAVVMHM 154 (294)
T ss_dssp HHHHHHHHHHTCEEEEECC
T ss_pred hHHHHHHHHhCCCEEEEcC
Confidence 5799999999999999853
No 209
>1rbl_M Ribulose 1,5 bisphosphate carboxylase/oxygenase ( chain); lyase(carbon-carbon), lyase; HET: CAP; 2.20A {Synechococcus elongatus} SCOP: d.73.1.1 PDB: 1rsc_M*
Probab=37.40 E-value=1.1e+02 Score=21.63 Aligned_cols=83 Identities=14% Similarity=0.149 Sum_probs=57.4
Q ss_pred eeccccCCCCCCCCCCHHHHHHHHHHHHHCCCC-ccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCcccc
Q 024050 24 GYGCMNLSGGYSSPVSEEDGISMIKHAFSKGIT-FFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVI 102 (273)
Q Consensus 24 glG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin-~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~ 102 (273)
-|||.++ =.+.++++..+.|++++..|.+ .+.-++. + ..|...+-.-|++...
T Consensus 10 ~~etfSy----LP~lt~eqI~kQI~Yll~qGw~p~lEf~d~-~--------------~~~~~yW~mwklPmf~------- 63 (109)
T 1rbl_M 10 RFETFSY----LPPLSDRQIAAQIEYMIEQGFHPLIEFNEH-S--------------NPEEFYWTMWKLPLFA------- 63 (109)
T ss_dssp CCSTTTT----SSCCCHHHHHHHHHHHHHHTCEEEEEEESC-C--------------CTTCCCCEECSSCCTT-------
T ss_pred ccccccc----CCCCCHHHHHHHHHHHHHCCCEEEEEeccC-c--------------cccccEEeecccCCcC-------
Confidence 4666653 3356899999999999999976 2332211 1 3466666666654433
Q ss_pred ccCCHHHHHHHHHHHHHHcCCCcccEEEecC
Q 024050 103 VKGAPDYVRSCCEASLKRLDVDYIDLYYQHR 133 (273)
Q Consensus 103 ~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~ 133 (273)
..++..+...|++.++.---.||-|+-+..
T Consensus 64 -~~d~~~Vl~Ele~C~k~~p~~yVRligfD~ 93 (109)
T 1rbl_M 64 -CAAPQQVLDEVRECRSEYGDCYIRVAGFDN 93 (109)
T ss_dssp -CCCHHHHHHHHHHHHHHCTTSEEEEEEEET
T ss_pred -CCCHHHHHHHHHHHHHHCCCCeEEEEEEeC
Confidence 346889999999999988878887766554
No 210
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=36.71 E-value=2e+02 Score=24.46 Aligned_cols=95 Identities=11% Similarity=-0.049 Sum_probs=53.7
Q ss_pred CEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEe-cCCCC-CCCHHHHHHHHHHHHHcCCccEEec
Q 024050 84 KIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQ-HRVDT-SVPIEETIGEMKKLVEEGKIKYIGL 161 (273)
Q Consensus 84 ~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~l-h~~~~-~~~~~~~~~~L~~l~~~G~ir~iGv 161 (273)
++-|..|+.+.....+. .+.+.. ..+-+.|+..|+|+|++-.= ..+.. .......++...++++.=.+--|++
T Consensus 209 ~~pv~vRls~~~~~~~g----~~~~~~-~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~iPVi~~ 283 (340)
T 3gr7_A 209 DGPLFVRISASDYHPDG----LTAKDY-VPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREADIPTGAV 283 (340)
T ss_dssp CSCEEEEEESCCCSTTS----CCGGGH-HHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTTCCEEEE
T ss_pred CCceEEEeccccccCCC----CCHHHH-HHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcCCcEEee
Confidence 45577788765422111 223333 24556678889877776421 11100 0011113455566666556666777
Q ss_pred CCC-CHHHHHHHhhcCCceEEee
Q 024050 162 SEA-SPGTIRRAHAVHPITAVQM 183 (273)
Q Consensus 162 S~~-~~~~l~~~~~~~~~~~~q~ 183 (273)
... +++..+++++....+.+++
T Consensus 284 GgI~s~e~a~~~L~~G~aD~V~i 306 (340)
T 3gr7_A 284 GLITSGWQAEEILQNGRADLVFL 306 (340)
T ss_dssp SSCCCHHHHHHHHHTTSCSEEEE
T ss_pred CCCCCHHHHHHHHHCCCeeEEEe
Confidence 774 6888899888877777776
No 211
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=36.65 E-value=39 Score=27.19 Aligned_cols=71 Identities=11% Similarity=-0.015 Sum_probs=46.1
Q ss_pred CHHHHHHHHHHHHHc-CCccEEecCCCCHHHHHHHhhcCCceEEeeecccccccccccHHHHHHHhCCeEEeccc
Q 024050 139 PIEETIGEMKKLVEE-GKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSP 212 (273)
Q Consensus 139 ~~~~~~~~L~~l~~~-G~ir~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~sp 212 (273)
...+++++|.++++. ++|.-+|..|.... ++.+.+....++.+..|+--+ .-...+..+++.|+.++.-..
T Consensus 91 s~~Dil~aL~~a~~~~~kIavVg~~~~~~~-~~~i~~ll~~~i~~~~~~~~e--e~~~~i~~l~~~G~~vVVG~~ 162 (225)
T 2pju_A 91 SGYDVLQFLAKAGKLTSSIGVVTYQETIPA-LVAFQKTFNLRLDQRSYITEE--DARGQINELKANGTEAVVGAG 162 (225)
T ss_dssp CHHHHHHHHHHTTCTTSCEEEEEESSCCHH-HHHHHHHHTCCEEEEEESSHH--HHHHHHHHHHHTTCCEEEESH
T ss_pred CHHHHHHHHHHHHhhCCcEEEEeCchhhhH-HHHHHHHhCCceEEEEeCCHH--HHHHHHHHHHHCCCCEEECCH
Confidence 457889999988875 56777888886543 333333333445554443322 127789999999999987543
No 212
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=35.66 E-value=2.1e+02 Score=25.27 Aligned_cols=96 Identities=14% Similarity=0.040 Sum_probs=62.7
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHc-C-Ccc-EEecC-CCCHHHHHHHhhcCCceE
Q 024050 105 GAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEE-G-KIK-YIGLS-EASPGTIRRAHAVHPITA 180 (273)
Q Consensus 105 ~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~-G-~ir-~iGvS-~~~~~~l~~~~~~~~~~~ 180 (273)
++++...+-+++..+. .+++++..|-...+ ++.+.+|.++ | .|- ..|=+ .++.+.+.++++....++
T Consensus 279 ~t~~eai~~~~~l~~~-----~~i~~iEePl~~~d----~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~~i~~~a~d~ 349 (444)
T 1w6t_A 279 RTSAEQIDYLEELVNK-----YPIITIEDGMDEND----WDGWKALTERLGKKVQLVGDDFFVTNTDYLARGIQEGAANS 349 (444)
T ss_dssp ECHHHHHHHHHHHHHH-----SCEEEEESCSCTTC----HHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSE
T ss_pred CCHHHHHHHHHHHHHh-----CCcEEEECCCChhh----HHHHHHHHHhhCCCCeEEeCCcccCCHHHHHHHHHcCCCCE
Confidence 4555555555554443 36888888865443 4455555544 2 332 23334 568889999998888889
Q ss_pred Eeeeccccccccc-ccHHHHHHHhCCeEEe
Q 024050 181 VQMEWSLWTRDIE-EEIIPLCRELGIGIVP 209 (273)
Q Consensus 181 ~q~~~~l~~~~~~-~~l~~~~~~~gi~v~a 209 (273)
+|+..+-.---.+ ..+...|+++|+.++.
T Consensus 350 i~ik~~~~GGitea~~ia~lA~~~g~~v~~ 379 (444)
T 1w6t_A 350 ILIKVNQIGTLTETFEAIEMAKEAGYTAVV 379 (444)
T ss_dssp EEECHHHHCSHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEcccccCCHHHHHHHHHHHHHCCCeEEe
Confidence 9987765432212 6788999999999987
No 213
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=35.56 E-value=1.9e+02 Score=24.07 Aligned_cols=118 Identities=12% Similarity=0.091 Sum_probs=65.2
Q ss_pred CCHHHHHHHHHHHHHCCCCccccccCCC--CCcHHHHHHHHHhcC-CCCCEEEEeccCcCCCCCccccccCCHHHHHHHH
Q 024050 38 VSEEDGISMIKHAFSKGITFFDTADVYG--QNANEVLLGKALKQL-PREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCC 114 (273)
Q Consensus 38 ~~~~~~~~~l~~A~~~Gin~~DtA~~Yg--~g~se~~lg~~l~~~-~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~ 114 (273)
++.++..++++.+.+.|++.|.-...-. ...-.+++. .+++. ....+.|+|.... +.+ .
T Consensus 50 ls~e~i~~~i~~~~~~g~~~i~~tGGEPll~~~l~~li~-~~~~~~~~~~i~i~TNG~l----------------l~~-~ 111 (340)
T 1tv8_A 50 LTFDEMARIAKVYAELGVKKIRITGGEPLMRRDLDVLIA-KLNQIDGIEDIGLTTNGLL----------------LKK-H 111 (340)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEESSCGGGSTTHHHHHH-HHTTCTTCCEEEEEECSTT----------------HHH-H
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCCccchhhHHHHHH-HHHhCCCCCeEEEEeCccc----------------hHH-H
Confidence 6789999999999999988766432110 111223332 33322 1226777775321 122 2
Q ss_pred HHHHHHcCCCcccEEEecCCCCC--------C-CHHHHHHHHHHHHHcCC---ccEEecCCCCHHHHHHHhh
Q 024050 115 EASLKRLDVDYIDLYYQHRVDTS--------V-PIEETIGEMKKLVEEGK---IKYIGLSEASPGTIRRAHA 174 (273)
Q Consensus 115 ~~sL~~L~~d~iDl~~lh~~~~~--------~-~~~~~~~~L~~l~~~G~---ir~iGvS~~~~~~l~~~~~ 174 (273)
-+.|...|+++|. +.|+..++. . ..+.++++++.+++.|. +..+-+...+.+.+.++++
T Consensus 112 ~~~L~~~g~~~v~-iSld~~~~~~~~~i~~~~~~~~~v~~~i~~l~~~g~~v~i~~vv~~g~n~~ei~~~~~ 182 (340)
T 1tv8_A 112 GQKLYDAGLRRIN-VSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGLNVKVNVVIQKGINDDQIIPMLE 182 (340)
T ss_dssp HHHHHHHTCCEEE-EECCCSSHHHHHHHHSSCCCHHHHHHHHHHHHHTTCEEEEEEEECTTTTGGGHHHHHH
T ss_pred HHHHHHCCCCEEE-EecCCCCHHHHHHhhCCCCCHHHHHHHHHHHHHCCCCEEEEEEEeCCCCHHHHHHHHH
Confidence 3445566766654 345554321 2 57889999999999986 2222222335555554443
No 214
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=35.48 E-value=2.2e+02 Score=24.60 Aligned_cols=135 Identities=14% Similarity=0.068 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHHCCCCcccc--c-----------------cCCCCCcHH---HHHHH---HHhc-CCCCCEEEEeccCcC
Q 024050 41 EDGISMIKHAFSKGITFFDT--A-----------------DVYGQNANE---VLLGK---ALKQ-LPREKIQVATKFGIA 94 (273)
Q Consensus 41 ~~~~~~l~~A~~~Gin~~Dt--A-----------------~~Yg~g~se---~~lg~---~l~~-~~r~~~~i~tK~~~~ 94 (273)
++..+.-+.|.++|+..+|. | +.|| |.-| +++-+ ++++ ...+ -|..|+.+.
T Consensus 167 ~~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yG-GslenR~r~~~eiv~aVr~avg~~--~V~vrls~~ 243 (376)
T 1icp_A 167 NEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYG-GSLENRCRFALEIVEAVANEIGSD--RVGIRISPF 243 (376)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTS-SSHHHHHHHHHHHHHHHHHHHCGG--GEEEEECTT
T ss_pred HHHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccC-ccHHHhHHHHHHHHHHHHHHhcCC--ceEEEeccc
Confidence 44555666778899988774 2 2344 2222 12222 2333 2223 366687654
Q ss_pred CCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCC--CCHHHHHHHHHHHHHcCCccEEecCCCCHHHHHHH
Q 024050 95 GIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTS--VPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRA 172 (273)
Q Consensus 95 ~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~--~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~ 172 (273)
.... ......+.+ --..+-+.|+..|+|+|++ |..... .+....++.+.++++.=.+--|+...++++..+++
T Consensus 244 ~~~~-g~~~~~~~~-~~~~la~~le~~Gvd~i~v---~~~~~~~~~~~~~~~~~~~~vr~~~~iPvi~~G~i~~~~a~~~ 318 (376)
T 1icp_A 244 AHYN-EAGDTNPTA-LGLYMVESLNKYDLAYCHV---VEPRMKTAWEKIECTESLVPMRKAYKGTFIVAGGYDREDGNRA 318 (376)
T ss_dssp CCTT-TCCCSCHHH-HHHHHHHHHGGGCCSEEEE---ECCSCCC------CCCCSHHHHHHCCSCEEEESSCCHHHHHHH
T ss_pred cccC-CCCCCCCHH-HHHHHHHHHHHcCCCEEEE---cCCcccCCCCccccHHHHHHHHHHcCCCEEEeCCCCHHHHHHH
Confidence 3110 000111122 2345566788888777666 433211 01011234455666655566778778888889999
Q ss_pred hhcCCceEEee
Q 024050 173 HAVHPITAVQM 183 (273)
Q Consensus 173 ~~~~~~~~~q~ 183 (273)
++....+.+++
T Consensus 319 l~~g~aD~V~~ 329 (376)
T 1icp_A 319 LIEDRADLVAY 329 (376)
T ss_dssp HHTTSCSEEEE
T ss_pred HHCCCCcEEee
Confidence 98877777776
No 215
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=35.38 E-value=1.7e+02 Score=23.98 Aligned_cols=98 Identities=17% Similarity=0.127 Sum_probs=49.2
Q ss_pred HHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHH-HHcCCccEEecC-------CCCHHHHHHHhhcCCceEEe
Q 024050 111 RSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKL-VEEGKIKYIGLS-------EASPGTIRRAHAVHPITAVQ 182 (273)
Q Consensus 111 ~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l-~~~G~ir~iGvS-------~~~~~~l~~~~~~~~~~~~q 182 (273)
.+.++..|+..| +|||.+-+-|-+...-.++.++...++ ++-|.--+.|=+ .-..+...+..+...++++.
T Consensus 25 ~~~~~d~Le~~g-~yID~lKfg~Gt~~l~~~~~l~eki~l~~~~gV~v~~GGTl~E~~~~qg~~~~yl~~~k~lGf~~iE 103 (251)
T 1qwg_A 25 PKFVEDYLKVCG-DYIDFVKFGWGTSAVIDRDVVKEKINYYKDWGIKVYPGGTLFEYAYSKGKFDEFLNECEKLGFEAVE 103 (251)
T ss_dssp HHHHHHHHHHHG-GGCSEEEECTTGGGGSCHHHHHHHHHHHHTTTCEEEECHHHHHHHHHTTCHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHhh-hhcceEEecCceeeecCHHHHHHHHHHHHHcCCeEECCcHHHHHHHHcCcHHHHHHHHHHcCCCEEE
Confidence 357788888888 999999999876654334444333333 233332222211 01122222222223345555
Q ss_pred eeccccccccc--ccHHHHHHHhCCeEEe
Q 024050 183 MEWSLWTRDIE--EEIIPLCRELGIGIVP 209 (273)
Q Consensus 183 ~~~~l~~~~~~--~~l~~~~~~~gi~v~a 209 (273)
+.-.-++-..+ ..+++.++++|..|+.
T Consensus 104 iS~G~i~l~~~~~~~~I~~~~~~G~~v~~ 132 (251)
T 1qwg_A 104 ISDGSSDISLEERNNAIKRAKDNGFMVLT 132 (251)
T ss_dssp ECCSSSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred ECCCcccCCHHHHHHHHHHHHHCCCEEee
Confidence 43333332211 4566666676666643
No 216
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=35.24 E-value=89 Score=27.99 Aligned_cols=63 Identities=16% Similarity=0.234 Sum_probs=42.3
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecC-CCCHHHHHHHhhcCCceEEeeec
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS-EASPGTIRRAHAVHPITAVQMEW 185 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS-~~~~~~l~~~~~~~~~~~~q~~~ 185 (273)
..+|.||+-+++..........+..-+ +.+.-.+..+||- |-+++.+.+..+...++.+|++=
T Consensus 272 ~~~Gad~iGfIf~~~SpR~V~~~~a~~----i~~~~~v~~VgVFvn~~~~~i~~~~~~~~ld~vQLHG 335 (452)
T 1pii_A 272 YDAGAIYGGLIFVATSPRCVNVEQAQE----VMAAAPLQYVGVFRNHDIADVVDKAKVLSLAAVQLHG 335 (452)
T ss_dssp HHHTCSEEEEECCTTCTTBCCHHHHHH----HHHHCCCEEEEEESSCCHHHHHHHHHHHTCSEEEECS
T ss_pred HhcCCCEEEeecCCCCCCCCCHHHHHH----HHhcCCCCEEEEEeCCCHHHHHHHHHhcCCCEEEECC
Confidence 457889999886432212233333222 2333579999995 67889999999888899999863
No 217
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=35.01 E-value=2.2e+02 Score=24.62 Aligned_cols=104 Identities=13% Similarity=0.048 Sum_probs=60.0
Q ss_pred CHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEE--ecCCCCHHHHHHHhhcCCceEEee
Q 024050 106 APDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI--GLSEASPGTIRRAHAVHPITAVQM 183 (273)
Q Consensus 106 ~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~i--GvS~~~~~~l~~~~~~~~~~~~q~ 183 (273)
+++...+.++..++..+ +.|--+=|...+...+.....++++.+++.|.-..+ |=...+.+.+..++......-+-.
T Consensus 163 ~~e~a~~~~~~a~~~~~-~~VvG~dL~g~E~~~p~~~f~~~f~~ar~~Gl~~t~HAGE~~~p~~~i~~al~~lga~RIgH 241 (380)
T 4gxw_A 163 DPDEAVAIVDWMKANRA-DEVAGIGIDYRENDRPPELFWKAYRDARAAGFRTTAHAGEFGMPWRNVETAVDLLHVDRVDH 241 (380)
T ss_dssp CHHHHHHHHHHHHHTCC-TTBCEEEEESCCTTCCGGGGHHHHHHHHHTTCEEEEEESCTTCCHHHHHHHHHTSCCSEEEE
T ss_pred CHHHHHHHHHHHHHhCC-CCEEEEeecCCCCCCCHHHHHHHHHHHHHcCCCeeeeccccCCchHHHHHHHHHcCCccccc
Confidence 45666666665555433 333333334444445556667777888888863333 323334566777766544444444
Q ss_pred ecccccccccccHHHHHHHhCCeEEecccCC
Q 024050 184 EWSLWTRDIEEEIIPLCRELGIGIVPYSPLG 214 (273)
Q Consensus 184 ~~~l~~~~~~~~l~~~~~~~gi~v~a~spl~ 214 (273)
-+++.+. .++++.+++++|.+-. .|..
T Consensus 242 G~~~~~d---~~L~~~l~~~~I~lEv-CP~S 268 (380)
T 4gxw_A 242 GYTIVDN---PELCARYAERGIVFTV-VPTN 268 (380)
T ss_dssp CGGGGGC---HHHHHHHHHHTCEEEE-CTTC
T ss_pred ceeeccC---hHHHHHHHHhCceeEE-CCcc
Confidence 4444433 5699999999998765 3554
No 218
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=34.28 E-value=2e+02 Score=24.05 Aligned_cols=152 Identities=13% Similarity=0.099 Sum_probs=77.4
Q ss_pred HHHHHHHHHCCCCccccccCCCCCcHHHHHH--HHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHc
Q 024050 44 ISMIKHAFSKGITFFDTADVYGQNANEVLLG--KALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRL 121 (273)
Q Consensus 44 ~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg--~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L 121 (273)
.+.++...+.+..||+....=|....+..+. ..+++ +..+-....+... +.++..++..+... ..+
T Consensus 42 ~~~~~~l~~l~p~fvsVT~gagg~~r~~t~~~a~~i~~--~~g~~~v~Hltc~---------~~~~~~l~~~L~~~-~~~ 109 (304)
T 3fst_A 42 WNSIDRLSSLKPKFVSVTYGANSGERDRTHSIIKGIKD--RTGLEAAPHLTCI---------DATPDELRTIARDY-WNN 109 (304)
T ss_dssp HHHHHHHHTTCCSEEEECCCTTSSCHHHHHHHHHHHHH--HHCCCEEEEEEST---------TSCHHHHHHHHHHH-HHT
T ss_pred HHHHHHHhcCCCCEEEEeeCCCCcchhHHHHHHHHHHH--HhCCCeeEEeecC---------CCCHHHHHHHHHHH-HHC
Confidence 3456766677899999884444333344333 33332 1111122222222 24577777776665 578
Q ss_pred CCCcccEEEecC-CCCC--CCHHHHHHHHHHHHHcCCccEEecCCCC--------H-HHHHHHhhc----CCceEEeeec
Q 024050 122 DVDYIDLYYQHR-VDTS--VPIEETIGEMKKLVEEGKIKYIGLSEAS--------P-GTIRRAHAV----HPITAVQMEW 185 (273)
Q Consensus 122 ~~d~iDl~~lh~-~~~~--~~~~~~~~~L~~l~~~G~ir~iGvS~~~--------~-~~l~~~~~~----~~~~~~q~~~ 185 (273)
|++. ++.|-. |... .......+-++.+++.+-. .||+..|+ . ..++.+.+. ..+.+-|.-|
T Consensus 110 GI~n--ILaLrGDpp~~~~~~~~~A~dLv~~ir~~~~f-~IgvA~yPE~Hp~a~~~~~d~~~Lk~KvdAGAdf~iTQ~ff 186 (304)
T 3fst_A 110 GIRH--IVALRGDLPPGSGKPEMYASDLVTLLKEVADF-DISVAAYPEVHPEAKSAQADLLNLKRKVDAGANRAITQFFF 186 (304)
T ss_dssp TCCE--EEEECCCCC------CCCHHHHHHHHHHHCCC-EEEEEECTTCCTTCSCHHHHHHHHHHHHHHTCCEEEECCCS
T ss_pred CCCE--EEEecCCCCCCCCCCCCCHHHHHHHHHHcCCC-eEEEEeCCCcCCCCCCHHHHHHHHHHHHHcCCCEEEeCccC
Confidence 8654 344432 2111 1122233444444444544 68887652 1 134444333 5677778766
Q ss_pred ccccccccccHHHHHHHhCCeEEecccCCCcc
Q 024050 186 SLWTRDIEEEIIPLCRELGIGIVPYSPLGRGF 217 (273)
Q Consensus 186 ~l~~~~~~~~l~~~~~~~gi~v~a~spl~~G~ 217 (273)
+.-. -..+++.|++.||.+ |.--|+
T Consensus 187 D~~~---~~~f~~~~r~~Gi~v----PIi~GI 211 (304)
T 3fst_A 187 DVES---YLRFRDRCVSAGIDV----EIIPGI 211 (304)
T ss_dssp CHHH---HHHHHHHHHHTTCCS----CEECEE
T ss_pred CHHH---HHHHHHHHHhcCCCC----cEEEEe
Confidence 5422 256889999998753 444454
No 219
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=34.09 E-value=23 Score=29.90 Aligned_cols=62 Identities=15% Similarity=0.158 Sum_probs=42.4
Q ss_pred cccCcceeccccCCCCCCCCC-----CHHHHHHHHHHHHHC-CCCccccccCCCCCcHHHHHHHHHhc
Q 024050 18 LEVSKLGYGCMNLSGGYSSPV-----SEEDGISMIKHAFSK-GITFFDTADVYGQNANEVLLGKALKQ 79 (273)
Q Consensus 18 ~~vs~lglG~~~~~~~~~~~~-----~~~~~~~~l~~A~~~-Gin~~DtA~~Yg~g~se~~lg~~l~~ 79 (273)
..-+++|+|+|.|+..++.-. +.....+.++.|-+. |+..++....+..+..-+.+.+.+++
T Consensus 5 ~~~~~~~~~~w~~~~~~~~f~~~g~~~~~~~~e~l~~aa~~~G~~~VEl~~~~~~~~~~~~l~~~l~~ 72 (333)
T 3ktc_A 5 YNYPEFGAGLWHFANYIDRYAVDGYGPALSTIDQINAAKEVGELSYVDLPYPFTPGVTLSEVKDALKD 72 (333)
T ss_dssp CCCCCEEEEGGGGSCCCCSSSTTCSSCCCCHHHHHHHHHHHSSEEEEEEEESCSTTCCHHHHHHHHHH
T ss_pred cCCCcceeeeeeeecccccccCCCCCCCCCHHHHHHHHHHhCCCCEEEecCCCcchhHHHHHHHHHHH
Confidence 345788999999987554421 234567889999999 99999886444322344557777774
No 220
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=33.78 E-value=2.2e+02 Score=24.21 Aligned_cols=100 Identities=10% Similarity=0.030 Sum_probs=61.5
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCC-CHHHHHHHhhcCCceEEee
Q 024050 105 GAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEA-SPGTIRRAHAVHPITAVQM 183 (273)
Q Consensus 105 ~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~-~~~~l~~~~~~~~~~~~q~ 183 (273)
.+++...+.++..++ .. +.+.-+=|...+...+.....+.++..++.|.-..+=.... +++.+.+++......-+-.
T Consensus 146 ~~~~~a~~~l~~a~~-~~-~~vvG~dL~g~E~~~~~~~~~~~~~~A~~~gl~~~~HagE~~~~~~i~~al~~lg~~rIgH 223 (343)
T 3rys_A 146 MSEDSALEVLDQLLA-MH-APIAGIGLDSAEVGNPPSKFERLYQRAAEAGLRRIAHAGEEGPASYITEALDVLHVERIDH 223 (343)
T ss_dssp SCHHHHHHHHHHHHH-TT-CCCCEEEEESCCTTCCGGGGHHHHHHHHHTTCEEEEEESSSSCHHHHHHHHHTSCCSEEEE
T ss_pred CCHHHHHHHHHHHHh-CC-CCEEEEecCCcccCCCHHHHHHHHHHHHHCCCeEEEeeCCCCCHHHHHHHHhcCCcceeee
Confidence 346677777777776 32 44444444455444556667778888899997655555443 4567777776433333332
Q ss_pred ecccccccccccHHHHHHHhCCeEEe
Q 024050 184 EWSLWTRDIEEEIIPLCRELGIGIVP 209 (273)
Q Consensus 184 ~~~l~~~~~~~~l~~~~~~~gi~v~a 209 (273)
-+++.+. .++++.++++||.+..
T Consensus 224 gv~l~~d---~~l~~~l~~~~i~le~ 246 (343)
T 3rys_A 224 GIRCMED---TDVVQRLVAEQVPLTV 246 (343)
T ss_dssp CGGGGGC---HHHHHHHHHHTCCEEE
T ss_pred eeeecCC---hHHHHHHHhcCCCeeE
Confidence 2333221 4689999999999865
No 221
>3sma_A FRBF; N-acetyl transferase, acetyl COA binding, transferase; HET: ACO; 2.00A {Streptomyces rubellomurinus}
Probab=32.73 E-value=56 Score=27.39 Aligned_cols=52 Identities=17% Similarity=0.186 Sum_probs=39.2
Q ss_pred HHHHHHHHHHcCCCcccEEEecCCCCCCC-----HHHHHHHHHHHH-HcCCccEEecC
Q 024050 111 RSCCEASLKRLDVDYIDLYYQHRVDTSVP-----IEETIGEMKKLV-EEGKIKYIGLS 162 (273)
Q Consensus 111 ~~~~~~sL~~L~~d~iDl~~lh~~~~~~~-----~~~~~~~L~~l~-~~G~ir~iGvS 162 (273)
++.+.+.|+.||++.=|.+++|.--.... .+.++++|.+++ ++|.+--=-.|
T Consensus 24 ~~~L~~~L~~LGI~~Gd~llVHsSL~~lG~v~Gga~~vi~AL~~~vg~~GTLvmPt~t 81 (286)
T 3sma_A 24 RDRLASDLAALGVRPGGVLLVHASLSALGWVCGGAQAVVLALQDAVGKEGTLVMPTFS 81 (286)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEEECSTTSCEETTHHHHHHHHHHHHHCTTCEEEEECCC
T ss_pred HHHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhcCCCEEEEeccC
Confidence 56788889999999999999997644322 467889998887 57876544433
No 222
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=32.38 E-value=37 Score=28.22 Aligned_cols=50 Identities=14% Similarity=0.087 Sum_probs=37.0
Q ss_pred HHHHHHHHHHcCCCcccEEEecCCCCC-----CCHHHHHHHHHHHHH-cCCccEEe
Q 024050 111 RSCCEASLKRLDVDYIDLYYQHRVDTS-----VPIEETIGEMKKLVE-EGKIKYIG 160 (273)
Q Consensus 111 ~~~~~~sL~~L~~d~iDl~~lh~~~~~-----~~~~~~~~~L~~l~~-~G~ir~iG 160 (273)
++.+.+.|++||++.=|.+++|.--.. ...+.++++|.+++. +|-+--=.
T Consensus 17 ~~~l~~~L~~LGi~~Gd~llVHsSl~~lG~v~gg~~~vi~AL~~~vg~~GTLvmPt 72 (268)
T 3ijw_A 17 IKTITNDLRKLGLKKGMTVIVHSSLSSIGWISGGAVAVVEALMEVITEEGTIIMPT 72 (268)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEEECTGGGCCBTTHHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HHHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhCCCCeEEEec
Confidence 467788889999999999999976432 124678899988875 67654333
No 223
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C*
Probab=32.21 E-value=2.6e+02 Score=24.98 Aligned_cols=99 Identities=12% Similarity=0.048 Sum_probs=59.2
Q ss_pred CHHHHHHHHHHHHH----HcCC-CcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcC---C
Q 024050 106 APDYVRSCCEASLK----RLDV-DYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVH---P 177 (273)
Q Consensus 106 ~~~~i~~~~~~sL~----~L~~-d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~---~ 177 (273)
+.+.+.+.++..-+ |.|- -.+|++.|+.-+.+. +.....++.+++ -.=--|-+.+++++.++++++.. .
T Consensus 103 ~e~~~~~~~~~~~~~~~~rvg~~~~~D~ial~~~s~dp--e~~~~vVk~V~e-~~dvPL~IDS~dpevleaALea~a~~~ 179 (446)
T 4djd_C 103 SSEELKAKVEAINGLNFDRVGQHYTIQAIAIRHDADDP--AAFKAAVASVAA-ATQLNLVLMADDPDVLKEALAGVADRK 179 (446)
T ss_dssp CHHHHHHHHHHHTTCCEEETTEEECCCEEEEECCSSST--HHHHHHHHHHHT-TCCSEEEEECSCHHHHHHHHGGGGGGC
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhccCcEEEEEeCCCCH--HHHHHHHHHHHH-hCCCCEEEecCCHHHHHHHHHhhcCcC
Confidence 34455555554422 3331 268999998875432 334444444443 22224677789999999998863 2
Q ss_pred ceEEeeecccccccccccHHHHHHHhCCeEEeccc
Q 024050 178 ITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSP 212 (273)
Q Consensus 178 ~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~sp 212 (273)
+.++-.. .+.-+.+.+.++++|..|+++++
T Consensus 180 plI~sat-----~dn~e~m~~lAa~y~~pVi~~~~ 209 (446)
T 4djd_C 180 PLLYAAT-----GANYEAMTALAKENNCPLAVYGN 209 (446)
T ss_dssp CEEEEEC-----TTTHHHHHHHHHHTTCCEEEECS
T ss_pred CeeEecc-----hhhHHHHHHHHHHcCCcEEEEec
Confidence 3333222 11115789999999999999876
No 224
>3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A*
Probab=32.09 E-value=2.6e+02 Score=24.44 Aligned_cols=107 Identities=10% Similarity=0.040 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHCCCC-ccccccCCCCCcHHHHHHHHHhc-CCCC--CEEEEeccCcCCCCCccccccCCHHHHHHHHH
Q 024050 40 EEDGISMIKHAFSKGIT-FFDTADVYGQNANEVLLGKALKQ-LPRE--KIQVATKFGIAGIGVAGVIVKGAPDYVRSCCE 115 (273)
Q Consensus 40 ~~~~~~~l~~A~~~Gin-~~DtA~~Yg~g~se~~lg~~l~~-~~r~--~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~ 115 (273)
.+......+.|+..|++ ++|++.........+.+...... ..+. ++.+..-+. +. .....+.++
T Consensus 71 ~e~~~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~-----------~~-~~~~~~~~~ 138 (461)
T 3sfw_A 71 SDNFFTGTKAAAFGGTTSIVDFCLTSKGESLHSAIATWHEKARGKAVIDYGFHLMVS-----------DA-NDHVLEELE 138 (461)
T ss_dssp SCCHHHHHHHHHHTTEEEEEEEECCCTTSCHHHHHHHHHHHHTTTCSSEEEEEEECS-----------CC-CHHHHHHHH
T ss_pred HhHHHHHHHHHHhCCEEEEEccCCCCCcchHHHHHHHHHHHhhcCcEEEEEEEEEEe-----------CC-CHHHHHHHH
Confidence 45566777888999997 55655433333344445444432 1111 121111111 11 233345566
Q ss_pred HHHHHcCCCcccEEEecCCC-CCCCHHHHHHHHHHHHHcCCccEE
Q 024050 116 ASLKRLDVDYIDLYYQHRVD-TSVPIEETIGEMKKLVEEGKIKYI 159 (273)
Q Consensus 116 ~sL~~L~~d~iDl~~lh~~~-~~~~~~~~~~~L~~l~~~G~ir~i 159 (273)
+.+++-|...+.+++- .+. .....++..+.++.+++.|+.-.+
T Consensus 139 ~l~~~~G~~~ik~~~~-~~~~~~~~~~~l~~~~~~a~~~g~~v~~ 182 (461)
T 3sfw_A 139 SVVNNEGITSLKVFMA-YKNVLMADDETLFKTLIRAKELGALVQV 182 (461)
T ss_dssp HHHHTSCCCEEEEESS-STTTTBCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHhCCCCEEEEEEe-cCCCcccCHHHHHHHHHHHHhcCCEEEE
Confidence 6555456666554432 222 234566777888888888875443
No 225
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=31.88 E-value=1.6e+02 Score=24.99 Aligned_cols=97 Identities=13% Similarity=0.045 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHHcCCCcccEEEec-CCCCCCCHHH----HHHHHHHHHHc--CCccEEecCCCCHHHHHHHhhcCCce
Q 024050 107 PDYVRSCCEASLKRLDVDYIDLYYQH-RVDTSVPIEE----TIGEMKKLVEE--GKIKYIGLSEASPGTIRRAHAVHPIT 179 (273)
Q Consensus 107 ~~~i~~~~~~sL~~L~~d~iDl~~lh-~~~~~~~~~~----~~~~L~~l~~~--G~ir~iGvS~~~~~~l~~~~~~~~~~ 179 (273)
.+.+.+..++ +-.-|-|.||+---- +|....+.+| +...++.+++. +. -|.|-+++++.++++++...-.
T Consensus 64 ~~~a~~~A~~-~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~~v--pISIDT~~~~VaeaAl~aGa~i 140 (318)
T 2vp8_A 64 DAAARDAVHR-AVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQ--LISVDTWRAQVAKAACAAGADL 140 (318)
T ss_dssp CHHHHHHHHH-HHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHSTTC--EEEEECSCHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHH-HHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCCCC--eEEEeCCCHHHHHHHHHhCCCE
Confidence 3444444433 333577888886532 3432233333 34445666665 33 4888899999999999885433
Q ss_pred EEeeecccccccccccHHHHHHHhCCeEEecc
Q 024050 180 AVQMEWSLWTRDIEEEIIPLCRELGIGIVPYS 211 (273)
Q Consensus 180 ~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~s 211 (273)
+ +..+-.. ..++++.++++|..++.+.
T Consensus 141 I--NDVsg~~---d~~m~~vaa~~g~~vVlmh 167 (318)
T 2vp8_A 141 I--NDTWGGV---DPAMPEVAAEFGAGLVCAH 167 (318)
T ss_dssp E--EETTSSS---STTHHHHHHHHTCEEEEEC
T ss_pred E--EECCCCC---chHHHHHHHHhCCCEEEEC
Confidence 3 3344442 2679999999999999986
No 226
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=31.85 E-value=2e+02 Score=23.68 Aligned_cols=45 Identities=13% Similarity=-0.096 Sum_probs=21.7
Q ss_pred CHHHHHHHhhc-CCceEEeeecccccccc-cccHHHHHHHhCCeEEec
Q 024050 165 SPGTIRRAHAV-HPITAVQMEWSLWTRDI-EEEIIPLCRELGIGIVPY 210 (273)
Q Consensus 165 ~~~~l~~~~~~-~~~~~~q~~~~l~~~~~-~~~l~~~~~~~gi~v~a~ 210 (273)
+++.++++++. ..+.++....|+.-... .+++.+.|+++|+ ++.=
T Consensus 127 d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~-li~D 173 (382)
T 4hvk_A 127 DVSFIDQKLRDDTILVSVQHANNEIGTIQPVEEISEVLAGKAA-LHID 173 (382)
T ss_dssp CHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHHHHHHSSSSE-EEEE
T ss_pred CHHHHHHHhccCceEEEEECCCCCceeeCCHHHHHHHHHHcCE-EEEE
Confidence 55666666543 22223333333322211 2567777777777 6643
No 227
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=31.81 E-value=63 Score=25.88 Aligned_cols=22 Identities=18% Similarity=0.117 Sum_probs=18.4
Q ss_pred CHHHHHHHHHHHHHCCCCcccc
Q 024050 39 SEEDGISMIKHAFSKGITFFDT 60 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~Dt 60 (273)
-+|.....++.|++.|...|.+
T Consensus 19 ~pENTl~Af~~A~~~G~d~iE~ 40 (238)
T 3no3_A 19 SAQNSIRSLERASEIGAYGSEF 40 (238)
T ss_dssp CCTTSHHHHHHHHHTTCSEEEE
T ss_pred CCccHHHHHHHHHHcCCCEEEE
Confidence 4577889999999999988764
No 228
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=31.77 E-value=1.5e+02 Score=27.24 Aligned_cols=100 Identities=10% Similarity=0.034 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHHHHcCCCcccEEEecCCCCC-CCHHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcCCceEEeee
Q 024050 106 APDYVRSCCEASLKRLDVDYIDLYYQHRVDTS-VPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQME 184 (273)
Q Consensus 106 ~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~-~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~q~~ 184 (273)
+.+.+.+..++.. .-|-|.||+- |+.. .+..+.++.+...+++-.=--|-|-+++++.++++++..+=..+-+.
T Consensus 338 ~~~~a~~~A~~~v-~~GAdiIDIg----pg~~~v~~~ee~~rvv~~i~~~~~vpisIDT~~~~v~eaal~~~~G~~iINd 412 (566)
T 1q7z_A 338 NEEIVIKEAKTQV-EKGAEVLDVN----FGIESQIDVRYVEKIVQTLPYVSNVPLSLDIQNVDLTERALRAYPGRSLFNS 412 (566)
T ss_dssp CCHHHHHHHHHHH-HTTCSEEEEE----CSSGGGSCHHHHHHHHHHHHHHTCSCEEEECCCHHHHHHHHHHCSSCCEEEE
T ss_pred CHHHHHHHHHHHH-HCCCCEEEEC----CCCCCCCHHHHHHHHHHHHHhhCCceEEEeCCCHHHHHHHHHhcCCCCEEEE
Q ss_pred cccccccccccHHHHHHHhCCeEEecc
Q 024050 185 WSLWTRDIEEEIIPLCRELGIGIVPYS 211 (273)
Q Consensus 185 ~~l~~~~~~~~l~~~~~~~gi~v~a~s 211 (273)
.|....+. .++++.++++|..++.+.
T Consensus 413 is~~~~~~-~~~~~~~~~~g~~vV~m~ 438 (566)
T 1q7z_A 413 AKVDEEEL-EMKINLLKKYGGTLIVLL 438 (566)
T ss_dssp EESCHHHH-HHHHHHHHHHCCEEEEES
T ss_pred CCcchhhH-HHHHHHHHHhCCeEEEEe
No 229
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=31.53 E-value=1.7e+02 Score=25.27 Aligned_cols=104 Identities=11% Similarity=0.148 Sum_probs=63.6
Q ss_pred CHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcCCceE-Eeee
Q 024050 106 APDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITA-VQME 184 (273)
Q Consensus 106 ~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~-~q~~ 184 (273)
+.+...+|+.+ |.+-|.|.+++-. +..+..+++.+++++=.+==++=-.|++..+.++++.. .+. --++
T Consensus 44 D~~atv~Qi~~-l~~aG~diVRvav--------p~~~~a~al~~I~~~~~vPlvaDiHf~~~lal~a~e~G-~dklRINP 113 (366)
T 3noy_A 44 DVEATLNQIKR-LYEAGCEIVRVAV--------PHKEDVEALEEIVKKSPMPVIADIHFAPSYAFLSMEKG-VHGIRINP 113 (366)
T ss_dssp CHHHHHHHHHH-HHHTTCCEEEEEC--------CSHHHHHHHHHHHHHCSSCEEEECCSCHHHHHHHHHTT-CSEEEECH
T ss_pred CHHHHHHHHHH-HHHcCCCEEEeCC--------CChHHHHHHHHHHhcCCCCEEEeCCCCHHHHHHHHHhC-CCeEEECC
Confidence 44455555543 5567888777732 23566889999998855444444468888777777652 222 1222
Q ss_pred cccccccccccHHHHHHHhCCeEE---ecccCCCccCC
Q 024050 185 WSLWTRDIEEEIIPLCRELGIGIV---PYSPLGRGFFG 219 (273)
Q Consensus 185 ~~l~~~~~~~~l~~~~~~~gi~v~---a~spl~~G~L~ 219 (273)
=|+-+.+...++++.|+++|+.+- ++..|...++.
T Consensus 114 GNig~~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ll~ 151 (366)
T 3noy_A 114 GNIGKEEIVREIVEEAKRRGVAVRIGVNSGSLEKDLLE 151 (366)
T ss_dssp HHHSCHHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHH
T ss_pred cccCchhHHHHHHHHHHHcCCCEEEecCCcCCCHHHHH
Confidence 233332222789999999999875 46666654444
No 230
>1gqo_A Dehydroquinase; dehydratase, lyase; 2.10A {Bacillus subtilis} SCOP: c.23.13.1
Probab=31.38 E-value=1.6e+02 Score=21.83 Aligned_cols=81 Identities=12% Similarity=0.088 Sum_probs=57.6
Q ss_pred cCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHc--CCccEEecCCCCHHHHHHHhhcCCceEE
Q 024050 104 KGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEE--GKIKYIGLSEASPGTIRRAHAVHPITAV 181 (273)
Q Consensus 104 ~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~--G~ir~iGvS~~~~~~l~~~~~~~~~~~~ 181 (273)
..+.+.|.+.+++.-+.+|+ .++.+|- ..-.+.++++.+..++ |.|-.=|--+++.-.|.+++......++
T Consensus 24 ~~tl~di~~~l~~~a~~~g~-~~~~~QS------N~EgeLid~Ih~a~~~~dgiiiNpgA~THtSvAlrDAl~~v~~P~V 96 (143)
T 1gqo_A 24 RQTLTDIETDLFQFAEALHI-QLTFFQS------NHEGDLIDAIHEAEEQYSGIVLNPGALSHYSYAIRDAVSSISLPVV 96 (143)
T ss_dssp SCCHHHHHHHHHHHHHHHTC-EEEEEEC------SCHHHHHHHHHHHTTTCSEEEEECGGGGGTCHHHHHHHHTSCSCEE
T ss_pred cCCHHHHHHHHHHHHHHcCC-EEEEEee------CCHHHHHHHHHHhhhcCcEEEEccchhccccHHHHHHHHhCCCCEE
Confidence 45788999999999999996 5777763 2246788888887542 2232334445566678888888777889
Q ss_pred eeeccccccc
Q 024050 182 QMEWSLWTRD 191 (273)
Q Consensus 182 q~~~~l~~~~ 191 (273)
.++.|-.+.+
T Consensus 97 EVHiSNi~aR 106 (143)
T 1gqo_A 97 EVHLSNLYAR 106 (143)
T ss_dssp EEESSCGGGS
T ss_pred EEEecCcccc
Confidence 9988877654
No 231
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=30.96 E-value=2.3e+02 Score=23.44 Aligned_cols=26 Identities=23% Similarity=0.291 Sum_probs=22.6
Q ss_pred CCCHHHHHHHHHHHHHCCCCcccccc
Q 024050 37 PVSEEDGISMIKHAFSKGITFFDTAD 62 (273)
Q Consensus 37 ~~~~~~~~~~l~~A~~~Gin~~DtA~ 62 (273)
.++.++..++++...+.|+..|+...
T Consensus 23 ~~~~e~k~~i~~~L~~~Gv~~IE~g~ 48 (298)
T 2cw6_A 23 IVSTPVKIKLIDMLSEAGLSVIETTS 48 (298)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEECCEE
T ss_pred CCCHHHHHHHHHHHHHcCcCEEEECC
Confidence 35789999999999999999999874
No 232
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=30.87 E-value=17 Score=33.00 Aligned_cols=23 Identities=17% Similarity=0.302 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHCCCCcccccc
Q 024050 40 EEDGISMIKHAFSKGITFFDTAD 62 (273)
Q Consensus 40 ~~~~~~~l~~A~~~Gin~~DtA~ 62 (273)
......++++|+++|+++||||.
T Consensus 93 ~~~~l~Im~acleaGv~YlDTa~ 115 (480)
T 2ph5_A 93 GISSLALIILCNQKGALYINAAT 115 (480)
T ss_dssp SSCHHHHHHHHHHHTCEEEESSC
T ss_pred cccCHHHHHHHHHcCCCEEECCC
Confidence 44678999999999999999994
No 233
>1h05_A 3-dehydroquinate dehydratase; shikimate pathway, alpha/beta protein, lyase, aromatic amino acid biosynthesis; 1.5A {Mycobacterium tuberculosis} SCOP: c.23.13.1 PDB: 1h0r_A* 1h0s_A* 2dhq_A 2xb8_A* 2y71_A* 2y76_A* 2y77_A* 3n76_A* 3n7a_A* 3n86_A* 3n87_A* 3n8n_A*
Probab=30.82 E-value=1.7e+02 Score=21.83 Aligned_cols=81 Identities=11% Similarity=-0.002 Sum_probs=60.5
Q ss_pred cCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHc--CCccEEecCCCCHHHHHHHhhcCCceEE
Q 024050 104 KGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEE--GKIKYIGLSEASPGTIRRAHAVHPITAV 181 (273)
Q Consensus 104 ~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~--G~ir~iGvS~~~~~~l~~~~~~~~~~~~ 181 (273)
..+.+.|.+.+++.-+.+|+ .++.+|- ..-.+.++++.+..++ |.|-.=|--+++.-.|.+++......++
T Consensus 26 ~~tl~di~~~l~~~a~~~g~-~~~~~QS------N~EgeLId~Ih~a~~~~dgiiINpgA~THtSvAlrDAl~~v~~P~V 98 (146)
T 1h05_A 26 GTTHDELVALIEREAAELGL-KAVVRQS------DSEAQLLDWIHQAADAAEPVILNAGGLTHTSVALRDACAELSAPLI 98 (146)
T ss_dssp CCCHHHHHHHHHHHHHHTTC-EEEEEEC------SCHHHHHHHHHHHHHHTCCEEEECGGGGGTCHHHHHHHHTCCSCEE
T ss_pred cCCHHHHHHHHHHHHHHcCC-EEEEEee------CCHHHHHHHHHHhhhcCcEEEECchhhccccHHHHHHHHhCCCCEE
Confidence 35689999999999999996 5777763 2246788888888654 5555556666666778888888878889
Q ss_pred eeeccccccc
Q 024050 182 QMEWSLWTRD 191 (273)
Q Consensus 182 q~~~~l~~~~ 191 (273)
.++.|-.+.+
T Consensus 99 EVHiSNi~aR 108 (146)
T 1h05_A 99 EVHISNVHAR 108 (146)
T ss_dssp EEESSCGGGS
T ss_pred EEEecCcccc
Confidence 9988877654
No 234
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=30.58 E-value=2.9e+02 Score=24.64 Aligned_cols=100 Identities=15% Similarity=0.065 Sum_probs=65.9
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEec--CCCCHHHHHHHhhcCCceEEe
Q 024050 105 GAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL--SEASPGTIRRAHAVHPITAVQ 182 (273)
Q Consensus 105 ~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGv--S~~~~~~l~~~~~~~~~~~~q 182 (273)
.+++.+.+-.++.++.. ++++|..|-...+. +.|..|.+.. ..+|-=+|= +..++..+.++++....++++
T Consensus 281 ~t~~Elid~y~~lle~y-----pIv~IEDPl~~dD~-eg~a~Lt~~l-g~~iqIvGDDl~vTn~~~i~~~Ie~~a~n~Il 353 (452)
T 3otr_A 281 LTGEKLKEVYEGWLKKY-----PIISVEDPFDQDDF-ASFSAFTKDV-GEKTQVIGDDILVTNILRIEKALKDKACNCLL 353 (452)
T ss_dssp ECHHHHHHHHHHHHHHS-----CEEEEECCSCTTCH-HHHHHHHHHH-TTTSEEEESTTTTTCHHHHHHHHHHTCCSEEE
T ss_pred ccHHHHHHHHHHHHhhh-----CceEEecCCChhhH-HHHHHHHHhh-CCCeEEEeCccccCCHHHHHHHHhcCCCCEEE
Confidence 46777777777777754 48888888665443 2344433322 124554552 334789999998887778888
Q ss_pred eeccccccccc-ccHHHHHHHhCCeEEecc
Q 024050 183 MEWSLWTRDIE-EEIIPLCRELGIGIVPYS 211 (273)
Q Consensus 183 ~~~~l~~~~~~-~~l~~~~~~~gi~v~a~s 211 (273)
+..|-.-.-.+ .++...|+++|+.++.-.
T Consensus 354 IKvnQIGgITEalka~~lA~~~G~~vmvsh 383 (452)
T 3otr_A 354 LKVNQIGSVTEAIEACLLAQKSGWGVQVSH 383 (452)
T ss_dssp ECHHHHCCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred eeccccccHHHHHHHHHHHHHcCCeEEEeC
Confidence 87765433212 678899999999987643
No 235
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=30.36 E-value=2.4e+02 Score=23.48 Aligned_cols=149 Identities=7% Similarity=-0.010 Sum_probs=79.8
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCC--cHHHHHHHHHhc-----CCCCCEEEEeccCcCCCCCccccccCCHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQN--ANEVLLGKALKQ-----LPREKIQVATKFGIAGIGVAGVIVKGAPDYVR 111 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g--~se~~lg~~l~~-----~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~ 111 (273)
..+++.+.+..+++.+.. .|+.. .-++.+.+++.+ ...+++++++= . .
T Consensus 41 ~~~~v~~a~~~~~~~~~~------~y~~~~~~l~~~la~~l~~~~g~~~~~~~i~~~~g----------------~---~ 95 (391)
T 3dzz_A 41 IAPEIMASMEEKLKVAAF------GYESVPAEYYKAVADWEEIEHRARPKEDWCVFASG----------------V---V 95 (391)
T ss_dssp CCHHHHHHHHHHHTTCCC------CCBCCCHHHHHHHHHHHHHHHSCCCCGGGEEEESC----------------H---H
T ss_pred CCHHHHHHHHHHHhcCcC------CCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECCC----------------H---H
Confidence 356788888888887643 23321 244566666653 23455555431 1 1
Q ss_pred HHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcC-CccEEec---CC---CCHHHHHHHhhcCC--ceEEe
Q 024050 112 SCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEG-KIKYIGL---SE---ASPGTIRRAHAVHP--ITAVQ 182 (273)
Q Consensus 112 ~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G-~ir~iGv---S~---~~~~~l~~~~~~~~--~~~~q 182 (273)
+++...++.+ ++.=|-+++..|.. ......+ ...| ++..+-+ .+ .+++.++++++..+ ..++.
T Consensus 96 ~a~~~~~~~l-~~~gd~vl~~~~~~----~~~~~~~---~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~ 167 (391)
T 3dzz_A 96 PAISAMVRQF-TSPGDQILVQEPVY----NMFYSVI---EGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFC 167 (391)
T ss_dssp HHHHHHHHHH-SCTTCEEEECSSCC----HHHHHHH---HHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEE
T ss_pred HHHHHHHHHh-CCCCCeEEECCCCc----HHHHHHH---HHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEE
Confidence 2333333333 23336677766643 2222222 2233 3444443 12 67888998886433 33333
Q ss_pred eecccccc----cccccHHHHHHHhCCeEEecccCCCccCCC
Q 024050 183 MEWSLWTR----DIEEEIIPLCRELGIGIVPYSPLGRGFFGG 220 (273)
Q Consensus 183 ~~~~l~~~----~~~~~l~~~~~~~gi~v~a~spl~~G~L~~ 220 (273)
.+.|+.-. ..-.++.+.|+++|+-++.=...+.+...+
T Consensus 168 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g 209 (391)
T 3dzz_A 168 NPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTD 209 (391)
T ss_dssp SSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS
T ss_pred CCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCC
Confidence 34443322 122789999999999999776665444443
No 236
>1svd_M Ribulose bisphosphate carboxylase small chain; beta-alpha-barrel, lyase; 1.80A {Halothiobacillus neapolitanus} SCOP: d.73.1.1
Probab=30.23 E-value=1.4e+02 Score=20.98 Aligned_cols=83 Identities=18% Similarity=0.157 Sum_probs=57.8
Q ss_pred eeccccCCCCCCCCCCHHHHHHHHHHHHHCCCC-ccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCcccc
Q 024050 24 GYGCMNLSGGYSSPVSEEDGISMIKHAFSKGIT-FFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVI 102 (273)
Q Consensus 24 glG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin-~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~ 102 (273)
-|||.++ =.+.++++..+.|++++..|.+ .+.-++. ...|...+-+-|++...
T Consensus 12 ~~etfSy----LP~lt~eqI~kQV~Yll~qGw~p~iEf~d~---------------~~~~~~yW~mwklPmf~------- 65 (110)
T 1svd_M 12 KYETFSY----LPPMNAERIRAQIKYAIAQGWSPGIEHVEV---------------KNSMNQYWYMWKLPFFG------- 65 (110)
T ss_dssp CCSTTTT----SCCCCHHHHHHHHHHHHHTTCEEEEEEECG---------------GGTTCSCCEEESCCCTT-------
T ss_pred ccccccc----CCCCCHHHHHHHHHHHHHCCCeeEEEeccC---------------CccCCcEEeecccCCcC-------
Confidence 4566553 3356899999999999999976 2222210 03466777777765433
Q ss_pred ccCCHHHHHHHHHHHHHHcCCCcccEEEecC
Q 024050 103 VKGAPDYVRSCCEASLKRLDVDYIDLYYQHR 133 (273)
Q Consensus 103 ~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~ 133 (273)
..++..+...|++.++.---.||-|+-+..
T Consensus 66 -~~d~~~Vl~El~~C~k~~p~~yVRligfD~ 95 (110)
T 1svd_M 66 -EQNVDNVLAEIEACRSAYPTHQVKLVAYDN 95 (110)
T ss_dssp -CCCHHHHHHHHHHHHHHSTTSEEEEEEEET
T ss_pred -CCCHHHHHHHHHHHHHHCCCCeEEEEEEeC
Confidence 346889999999999988878887766554
No 237
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=30.09 E-value=2.6e+02 Score=23.80 Aligned_cols=87 Identities=11% Similarity=0.003 Sum_probs=50.6
Q ss_pred cEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhc-CCceEEeeecccccccc-cccHHHHHHHhC
Q 024050 127 DLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV-HPITAVQMEWSLWTRDI-EEEIIPLCRELG 204 (273)
Q Consensus 127 Dl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~-~~~~~~q~~~~l~~~~~-~~~l~~~~~~~g 204 (273)
|-+++..+.. ..++..+.++.+.--++..-+...+++.++++++. ....++....|+.-.-. ..++.+.|+++|
T Consensus 106 d~Vi~~~~~y----~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~g 181 (392)
T 3qhx_A 106 DHVVIPDDAY----GGTFRLIDKVFTGWNVEYTPVALADLDAVRAAIRPTTRLIWVETPTNPLLSIADIAGIAQLGADSS 181 (392)
T ss_dssp CEEEEETTCC----HHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHT
T ss_pred CEEEEeCCCc----chHHHHHHHHHHhcCcEEEEeCCCCHHHHHHhhCCCCeEEEEECCCCCCcEEecHHHHHHHHHHcC
Confidence 5555555433 34555554443332233344444478888887753 33444555555543221 278999999999
Q ss_pred CeEEecccCCCcc
Q 024050 205 IGIVPYSPLGRGF 217 (273)
Q Consensus 205 i~v~a~spl~~G~ 217 (273)
+-++.=..++.+.
T Consensus 182 ~~li~D~~~~~~~ 194 (392)
T 3qhx_A 182 AKVLVDNTFASPA 194 (392)
T ss_dssp CEEEEECTTTCTT
T ss_pred CEEEEECCCcccc
Confidence 9999776665554
No 238
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=30.04 E-value=1e+02 Score=24.76 Aligned_cols=19 Identities=5% Similarity=0.232 Sum_probs=15.7
Q ss_pred ccHHHHHHHhCCeEEeccc
Q 024050 194 EEIIPLCRELGIGIVPYSP 212 (273)
Q Consensus 194 ~~l~~~~~~~gi~v~a~sp 212 (273)
.++++.|+++|+.|.+|.+
T Consensus 194 ~~~v~~~~~~G~~V~~WTv 212 (250)
T 3ks6_A 194 AGLMAQVQAAGLDFGCWAA 212 (250)
T ss_dssp HHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHCCCEEEEEeC
Confidence 5688899999999999843
No 239
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=29.99 E-value=2.3e+02 Score=23.30 Aligned_cols=110 Identities=14% Similarity=0.032 Sum_probs=72.0
Q ss_pred cCCHHHHHHHHHHHHH-HcCCCcccEEEecCCCCC-CCHHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcCCceEE
Q 024050 104 KGAPDYVRSCCEASLK-RLDVDYIDLYYQHRVDTS-VPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAV 181 (273)
Q Consensus 104 ~~~~~~i~~~~~~sL~-~L~~d~iDl~~lh~~~~~-~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~ 181 (273)
+.+.+......+-..| -++++.|-|..+..+... .+..+++++.++|+++|..- +-+++-++..-+++.+... +++
T Consensus 83 ~~ta~eAv~~a~lare~~~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~V-lpy~~dd~~~akrl~~~G~-~aV 160 (265)
T 1wv2_A 83 CYDAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDV-MVYTSDDPIIARQLAEIGC-IAV 160 (265)
T ss_dssp CCSHHHHHHHHHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEE-EEEECSCHHHHHHHHHSCC-SEE
T ss_pred CCCHHHHHHHHHHHHHHcCCCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEE-EEEeCCCHHHHHHHHHhCC-CEE
Confidence 4567777777888888 888888888777555433 45789999999999999854 4456667776666655543 334
Q ss_pred eeeccccccc---ccccHHHHHHHh-CCeEEecccCCCccCC
Q 024050 182 QMEWSLWTRD---IEEEIIPLCREL-GIGIVPYSPLGRGFFG 219 (273)
Q Consensus 182 q~~~~l~~~~---~~~~l~~~~~~~-gi~v~a~spl~~G~L~ 219 (273)
...=.+.-.. ...++++...+. ++.||+ .+|+-+
T Consensus 161 mPlg~pIGsG~Gi~~~~lI~~I~e~~~vPVI~----eGGI~T 198 (265)
T 1wv2_A 161 MPLAGLIGSGLGICNPYNLRIILEEAKVPVLV----DAGVGT 198 (265)
T ss_dssp EECSSSTTCCCCCSCHHHHHHHHHHCSSCBEE----ESCCCS
T ss_pred EeCCccCCCCCCcCCHHHHHHHHhcCCCCEEE----eCCCCC
Confidence 3312222211 114566666665 899998 566644
No 240
>2a5h_A L-lysine 2,3-aminomutase; radical SAM, four-iron-four-sulfur cluster, 4Fe4S, FS4, SAM, adenosylmethionine, alpha-beta channel; HET: SAM LYS PLP; 2.10A {Clostridium subterminale}
Probab=29.50 E-value=2.8e+02 Score=24.14 Aligned_cols=108 Identities=13% Similarity=0.068 Sum_probs=59.2
Q ss_pred cCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCH-HHHHHHHHHHHHcCCccEEecCCC---------CHHHHHHHh
Q 024050 104 KGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPI-EETIGEMKKLVEEGKIKYIGLSEA---------SPGTIRRAH 173 (273)
Q Consensus 104 ~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~-~~~~~~L~~l~~~G~ir~iGvS~~---------~~~~l~~~~ 173 (273)
..+.+.+.+.++...+..++.. +.+..-++.... ....+.++.+++.+.++.|.+++. +.+.++.+.
T Consensus 144 ~ls~eei~~~i~~i~~~~gi~~---V~ltGGEPll~~d~~L~~il~~l~~~~~v~~i~i~Tng~~~~p~~it~e~l~~L~ 220 (416)
T 2a5h_A 144 SMPMERIDKAIDYIRNTPQVRD---VLLSGGDALLVSDETLEYIIAKLREIPHVEIVRIGSRTPVVLPQRITPELVNMLK 220 (416)
T ss_dssp BCCHHHHHHHHHHHHTCTTCCE---EEEEESCTTSSCHHHHHHHHHHHHTSTTCCEEEEECSHHHHCGGGCCHHHHHHHG
T ss_pred CCCHHHHHHHHHHHHhcCCCcE---EEEECCCCCCCCHHHHHHHHHHHHhcCCccEEEEEecccccccccCCHHHHHHHH
Confidence 4677888888876655466544 344443332222 235666677777666666666542 245555555
Q ss_pred hcCCceEEeeeccccccc-c---cccHHHHHHHhCCeEEecccCCCcc
Q 024050 174 AVHPITAVQMEWSLWTRD-I---EEEIIPLCRELGIGIVPYSPLGRGF 217 (273)
Q Consensus 174 ~~~~~~~~q~~~~l~~~~-~---~~~l~~~~~~~gi~v~a~spl~~G~ 217 (273)
+. ....+.++. .+.. . ..+.++.+++.|+.+....++..|+
T Consensus 221 ~~-~~v~Isl~~--~~~~ei~~~v~~ai~~L~~aGi~v~i~~vll~Gv 265 (416)
T 2a5h_A 221 KY-HPVWLNTHF--NHPNEITEESTRACQLLADAGVPLGNQSVLLRGV 265 (416)
T ss_dssp GG-CSEEEEECC--CSGGGCCHHHHHHHHHHHHTTCCEEEEEECCTTT
T ss_pred hc-CcEEEEEec--CCHHHHhHHHHHHHHHHHHcCCEEEEEEEEECCC
Confidence 54 222222222 2211 1 1456667778888777766776554
No 241
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=29.39 E-value=2.7e+02 Score=23.89 Aligned_cols=63 Identities=14% Similarity=0.046 Sum_probs=39.1
Q ss_pred HHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcCCceEEee
Q 024050 112 SCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQM 183 (273)
Q Consensus 112 ~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~q~ 183 (273)
..+-+.|+..|+|||++ |...... +. ..++++.=.+--|++..++++..+++++....+.+.+
T Consensus 245 ~~la~~l~~~Gvd~i~v---~~~~~~~---~~---~~~ik~~~~iPvi~~Ggit~e~a~~~l~~g~aD~V~i 307 (362)
T 4ab4_A 245 TYVARELGKRGIAFICS---REREADD---SI---GPLIKEAFGGPYIVNERFDKASANAALASGKADAVAF 307 (362)
T ss_dssp HHHHHHHHHTTCSEEEE---ECCCCTT---CC---HHHHHHHHCSCEEEESSCCHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHHhCCCEEEE---CCCCCCH---HH---HHHHHHHCCCCEEEeCCCCHHHHHHHHHcCCccEEEE
Confidence 45666778888766664 5443211 12 2333333234567777788999999998877776665
No 242
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=29.15 E-value=40 Score=27.45 Aligned_cols=28 Identities=18% Similarity=0.476 Sum_probs=24.1
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCC
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQ 66 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~ 66 (273)
++++...+.+.|.++|..|+.|+..|+.
T Consensus 155 t~eei~~a~~ia~~aGADfVKTSTGf~~ 182 (239)
T 3ngj_A 155 TNEEKVEVCKRCVAAGAEYVKTSTGFGT 182 (239)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECCCSSSS
T ss_pred CHHHHHHHHHHHHHHCcCEEECCCCCCC
Confidence 6788888999999999999999988763
No 243
>2ksn_A Ubiquitin domain-containing protein 2; UBTD2, DC-UBP, signaling protein; NMR {Homo sapiens}
Probab=28.83 E-value=18 Score=26.67 Aligned_cols=14 Identities=36% Similarity=0.667 Sum_probs=10.9
Q ss_pred CccccccCCCCCcHH
Q 024050 56 TFFDTADVYGQNANE 70 (273)
Q Consensus 56 n~~DtA~~Yg~g~se 70 (273)
-||||+++|+ |+.|
T Consensus 44 EFWDT~p~~~-Gr~E 57 (137)
T 2ksn_A 44 EFWDTAPAFE-GRKE 57 (137)
T ss_dssp HHHTTSSTTC-CCHH
T ss_pred HHHhcCCccC-CCHH
Confidence 3999999997 4455
No 244
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=28.76 E-value=1.2e+02 Score=19.74 Aligned_cols=58 Identities=16% Similarity=0.191 Sum_probs=35.2
Q ss_pred HHHHHHcCCccEEecCCCCHHHHHHHhhcCCceEEeeecccccccccccHHHHHHHhCCeEEecc
Q 024050 147 MKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYS 211 (273)
Q Consensus 147 L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~s 211 (273)
++++++.|++. .| ..+..++++......+-+--+.-. +....+..+|.+++|+++-+.
T Consensus 3 ~~~~~kagk~~-~G-----~~~v~kai~~gkaklViiA~D~~~-~~~~~i~~lc~~~~Ip~~~v~ 60 (82)
T 3v7e_A 3 YDKVSQAKSII-IG-----TKQTVKALKRGSVKEVVVAKDADP-ILTSSVVSLAEDQGISVSMVE 60 (82)
T ss_dssp HHHHHHCSEEE-ES-----HHHHHHHHTTTCEEEEEEETTSCH-HHHHHHHHHHHHHTCCEEEES
T ss_pred HHHHHHcCCee-Ec-----HHHHHHHHHcCCeeEEEEeCCCCH-HHHHHHHHHHHHcCCCEEEEC
Confidence 56788888864 23 455666676654333333222211 222678899999999998764
No 245
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=28.52 E-value=1.6e+02 Score=22.45 Aligned_cols=89 Identities=21% Similarity=0.244 Sum_probs=49.2
Q ss_pred CHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCC-CCHHHHHHHhhcCCceEEeee
Q 024050 106 APDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE-ASPGTIRRAHAVHPITAVQME 184 (273)
Q Consensus 106 ~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~-~~~~~l~~~~~~~~~~~~q~~ 184 (273)
+.+...+.++ .+..-| +|++-+|...+ ...+.++.+.+....+ ..||+++ .++++++.+.+.. .+++ +
T Consensus 20 ~~~~~~~~~~-~~~~~G---~~~iev~~~~~--~~~~~i~~ir~~~~~~--~~ig~~~v~~~~~~~~a~~~G-ad~i-v- 88 (205)
T 1wa3_A 20 SVEEAKEKAL-AVFEGG---VHLIEITFTVP--DADTVIKELSFLKEKG--AIIGAGTVTSVEQCRKAVESG-AEFI-V- 88 (205)
T ss_dssp SHHHHHHHHH-HHHHTT---CCEEEEETTST--THHHHHHHTHHHHHTT--CEEEEESCCSHHHHHHHHHHT-CSEE-E-
T ss_pred CHHHHHHHHH-HHHHCC---CCEEEEeCCCh--hHHHHHHHHHHHCCCC--cEEEecccCCHHHHHHHHHcC-CCEE-E-
Confidence 3454444443 344556 45556665432 2233344444333223 3588844 6888887777653 3334 2
Q ss_pred cccccccccccHHHHHHHhCCeEEe
Q 024050 185 WSLWTRDIEEEIIPLCRELGIGIVP 209 (273)
Q Consensus 185 ~~l~~~~~~~~l~~~~~~~gi~v~a 209 (273)
+... ..++++.|+++|+.+++
T Consensus 89 -~~~~---~~~~~~~~~~~g~~vi~ 109 (205)
T 1wa3_A 89 -SPHL---DEEISQFCKEKGVFYMP 109 (205)
T ss_dssp -CSSC---CHHHHHHHHHHTCEEEC
T ss_pred -cCCC---CHHHHHHHHHcCCcEEC
Confidence 1111 25689999999999986
No 246
>1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A
Probab=28.37 E-value=85 Score=26.45 Aligned_cols=106 Identities=8% Similarity=0.136 Sum_probs=57.8
Q ss_pred CHHHHHHHHHHHHHHcCCCcccEEEecCCCCCC----CHHHHHHHHHHHHHcCC-ccEEecCCC------CHHHHHHHhh
Q 024050 106 APDYVRSCCEASLKRLDVDYIDLYYQHRVDTSV----PIEETIGEMKKLVEEGK-IKYIGLSEA------SPGTIRRAHA 174 (273)
Q Consensus 106 ~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~----~~~~~~~~L~~l~~~G~-ir~iGvS~~------~~~~l~~~~~ 174 (273)
..+.|..+++...+.- ... .+++....... .....++.++.|++.|. |..||+-.| +++.+++.++
T Consensus 147 G~~~i~~af~~Ar~~d--P~a-~L~~Ndyn~~~~~~~k~~~~~~~v~~l~~~G~~iDgIG~Q~H~~~~~~~~~~~~~~l~ 223 (313)
T 1v0l_A 147 GNDWIEVAFRTARAAD--PSA-KLCYNDYNVENWTWAKTQAMYNMVRDFKQRGVPIDCVGFQSHFNSGSPYNSNFRTTLQ 223 (313)
T ss_dssp CTTHHHHHHHHHHHHC--TTS-EEEEEESSCCSTTSHHHHHHHHHHHHHHHHTCCCCEEEECCEEBTTBCCCTTHHHHHH
T ss_pred hHHHHHHHHHHHHhhC--CCC-EEEEeccccccCChHHHHHHHHHHHHHHHCCCCcceEEEeEEccCCCCCHHHHHHHHH
Confidence 3566777777766642 122 23333332221 12345777888999997 999999543 2344444433
Q ss_pred c---CCceEEeeeccccccccc--ccHHHHHHHhC--CeEEecccCC
Q 024050 175 V---HPITAVQMEWSLWTRDIE--EEIIPLCRELG--IGIVPYSPLG 214 (273)
Q Consensus 175 ~---~~~~~~q~~~~l~~~~~~--~~l~~~~~~~g--i~v~a~spl~ 214 (273)
. ....+.-.++-+-..+.+ ..+++.|.++. ++|+.|..-.
T Consensus 224 ~~a~~G~pv~iTEldi~~~qa~~y~~~~~~~~~~~~v~git~Wg~~D 270 (313)
T 1v0l_A 224 NFAALGVDVAITELDIQGAPASTYANVTNDCLAVSRCLGITVWGVRD 270 (313)
T ss_dssp HHHTTTCEEEEEEEEETTCCHHHHHHHHHHHHTCTTEEEEEESCSBG
T ss_pred HHHhcCCeEEEEeCCccHHHHHHHHHHHHHHHhcCCceEEEEECCCC
Confidence 2 222222233333222222 67899999875 6777776543
No 247
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=27.66 E-value=2.9e+02 Score=23.64 Aligned_cols=67 Identities=13% Similarity=0.058 Sum_probs=44.6
Q ss_pred HHHHHHHHcCCCcccEEEecCC-CCCCCHHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcCCceEEee
Q 024050 113 CCEASLKRLDVDYIDLYYQHRV-DTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQM 183 (273)
Q Consensus 113 ~~~~sL~~L~~d~iDl~~lh~~-~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~q~ 183 (273)
.+-+.|+..|+|||++-.-... .... .++.+.++++.=.+--|+...++++..+++++....+.+++
T Consensus 255 ~~a~~l~~~G~d~i~v~~~~~~~~~~~----~~~~~~~v~~~~~iPvi~~Ggit~~~a~~~l~~g~aD~V~~ 322 (364)
T 1vyr_A 255 YLIEELAKRGIAYLHMSETDLAGGKPY----SEAFRQKVRERFHGVIIGAGAYTAEKAEDLIGKGLIDAVAF 322 (364)
T ss_dssp HHHHHHHHTTCSEEEEECCBTTBCCCC----CHHHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHhCCCEEEEecCcccCCCcc----cHHHHHHHHHHCCCCEEEECCcCHHHHHHHHHCCCccEEEE
Confidence 4566778889877776431110 0111 24556677776667778888888999999998877777776
No 248
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=27.64 E-value=3.1e+02 Score=24.05 Aligned_cols=136 Identities=12% Similarity=0.008 Sum_probs=82.0
Q ss_pred HHHHHHHHHhcC-CCCCEEEEeccCcCCC-CCcccc---ccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHH
Q 024050 69 NEVLLGKALKQL-PREKIQVATKFGIAGI-GVAGVI---VKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEET 143 (273)
Q Consensus 69 se~~lg~~l~~~-~r~~~~i~tK~~~~~~-~~~~~~---~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~ 143 (273)
.-+.+-+++++. ...++.|..=+..... ..+.+. ..++++...+-+++.++.+ +++++..|-...+
T Consensus 220 ~l~~i~~Air~aGy~~dv~l~vD~~ase~~~~g~y~l~~~~~t~~eai~~~~~ll~~y-----~i~~IEdPl~~dD---- 290 (417)
T 3qn3_A 220 PIDLLMTCIKKAGYENRVKIALDVASTEFFKDGKYHMEGKAFSSEALIERYVELCAKY-----PICSIEDGLAEND---- 290 (417)
T ss_dssp HHHHHHHHHHHTTCTTTEEEEEECCGGGGEETTEEEETTEEECHHHHHHHHHHHHHHS-----CEEEEESSSCTTC----
T ss_pred HHHHHHHHHHHcCCCCCceEEEECCchhhccCCeeecCCCccCHHHHHHHHHHHHhhc-----ceeEEecCCCccc----
Confidence 344555677763 3358888775542210 001111 1235666666666666654 4788888865443
Q ss_pred HHHHHHHHHc-C-CccEEe-cCCCC-HHHHHHHhhcCCceEEeeeccccccccc-ccHHHHHHHhCCeEEecccC
Q 024050 144 IGEMKKLVEE-G-KIKYIG-LSEAS-PGTIRRAHAVHPITAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSPL 213 (273)
Q Consensus 144 ~~~L~~l~~~-G-~ir~iG-vS~~~-~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l~~~~~~~gi~v~a~spl 213 (273)
|+.+.+|.++ | .|-=.| =+.++ ++.+.++++....+++|+..+-.---.+ ..+...|+++|+.++.-...
T Consensus 291 ~e~~~~L~~~~g~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~iKv~qiGGiTea~kia~lA~~~G~~v~vsh~s 365 (417)
T 3qn3_A 291 FEGWIKLTEKLGNKIQLVGDDLFVTNEDILREGIIKKMANAVLIKPNQIGTITQTMRTVRLAQRNNYKCVMSHRS 365 (417)
T ss_dssp HHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECHHHHCSHHHHHHHHHHHHHTTCEEEEECCS
T ss_pred HHHHHHHHHhhCCCCceecCCcccCCHHHHHHHHHhCCCCEEEecCCCCCCHHHHHHHHHHHHHcCCeEEEeCCC
Confidence 4555555544 3 443222 23344 8889999988888889987765443212 67889999999999865443
No 249
>2nyg_A YOKD protein; PFAM02522, NYSGXRC, aminoglycoside 3-N- acetyltransferase, PSI-2, structural genomics, protein structure initiative; HET: COA; 2.60A {Bacillus subtilis} SCOP: c.140.1.2
Probab=27.56 E-value=53 Score=27.27 Aligned_cols=47 Identities=21% Similarity=0.148 Sum_probs=35.4
Q ss_pred HHHHHHHHHHcCCCcccEEEecCCCCC-----CCHHHHHHHHHHHHH-cCCcc
Q 024050 111 RSCCEASLKRLDVDYIDLYYQHRVDTS-----VPIEETIGEMKKLVE-EGKIK 157 (273)
Q Consensus 111 ~~~~~~sL~~L~~d~iDl~~lh~~~~~-----~~~~~~~~~L~~l~~-~G~ir 157 (273)
++.+.+.|+.||+..=|.+++|.--.. ...+.++++|.+++. +|-+-
T Consensus 15 ~~~L~~~L~~LGI~~Gd~llVHsSl~~lG~v~gg~~~vi~AL~~~vg~~GTLv 67 (273)
T 2nyg_A 15 KQSITEDLKALGLKKGMTVLVHSSLSSIGWVNGGAVAVIQALIDVVTEEGTIV 67 (273)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEEECSGGGCCBTTHHHHHHHHHHHHHTTTSEEE
T ss_pred HHHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhCCCCeEE
Confidence 467778889999999999999975322 225678899988774 77654
No 250
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=27.21 E-value=88 Score=25.86 Aligned_cols=39 Identities=13% Similarity=0.235 Sum_probs=21.1
Q ss_pred HHHHHHHHHcCCccEEecCCC-CHHHHHHHhhcCCceEEee
Q 024050 144 IGEMKKLVEEGKIKYIGLSEA-SPGTIRRAHAVHPITAVQM 183 (273)
Q Consensus 144 ~~~L~~l~~~G~ir~iGvS~~-~~~~l~~~~~~~~~~~~q~ 183 (273)
++.+.++++.=.+--|+.... +++.+.++++.. .+.+|+
T Consensus 230 ~~~i~~i~~~~~ipvia~GGI~~~~d~~~~l~~G-Ad~V~v 269 (311)
T 1ep3_A 230 LKLIHQVAQDVDIPIIGMGGVANAQDVLEMYMAG-ASAVAV 269 (311)
T ss_dssp HHHHHHHHTTCSSCEEECSSCCSHHHHHHHHHHT-CSEEEE
T ss_pred HHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcC-CCEEEE
Confidence 455555555444555555554 566666665543 444544
No 251
>2jya_A AGR_C_3324P, uncharacterized protein ATU1810; protein with unknown function ATU1810, ontario centre for ST proteomics, OCSP; NMR {Agrobacterium tumefaciens str}
Probab=26.45 E-value=44 Score=23.51 Aligned_cols=21 Identities=19% Similarity=0.154 Sum_probs=18.8
Q ss_pred ccHHHHHHHhCCeEEecccCC
Q 024050 194 EEIIPLCRELGIGIVPYSPLG 214 (273)
Q Consensus 194 ~~l~~~~~~~gi~v~a~spl~ 214 (273)
++.+.+|+++|+.+....|-.
T Consensus 62 E~AiayAek~G~~y~V~ep~~ 82 (106)
T 2jya_A 62 EQAEAYAQRKGIEYRVILPKE 82 (106)
T ss_dssp HHHHHHHHHHTCEEEECCCTT
T ss_pred HHHHHHHHHcCCEEEEeCCCc
Confidence 679999999999999988765
No 252
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=26.06 E-value=2.7e+02 Score=22.94 Aligned_cols=66 Identities=14% Similarity=0.001 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHcC----------------------CCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCC-
Q 024050 107 PDYVRSCCEASLKRLD----------------------VDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE- 163 (273)
Q Consensus 107 ~~~i~~~~~~sL~~L~----------------------~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~- 163 (273)
.......+.+.|+..| ++..|++.+.. ....-..+..++|.+.+++|. ..+|+-.
T Consensus 18 ~~~~~~~l~~~l~~~g~f~V~~~~d~~~~~d~~~f~~~L~~~D~vV~~~-~~~~l~~~~~~~l~~yV~~Gg-glv~~H~a 95 (281)
T 4e5v_A 18 WQVSHVVLKQILENSGRFDVDFVISPEQGKDMSGFVLDFSPYQLVVLDY-NGDSWPEETNRRFLEYVQNGG-GVVIYHAA 95 (281)
T ss_dssp HHHHHHHHHHHHHHTTSEEEEEEECCCTTSCCTTCCCCCTTCSEEEECC-CSSCCCHHHHHHHHHHHHTTC-EEEEEGGG
T ss_pred hHHHHHHHHHHHHhcCCEEEEEEeCCccccchhHHhhhhhcCCEEEEeC-CCCcCCHHHHHHHHHHHHcCC-CEEEEecc
Confidence 5555566666666555 34577777544 222334789999999999995 5677632
Q ss_pred ----CCHHHHHHHhh
Q 024050 164 ----ASPGTIRRAHA 174 (273)
Q Consensus 164 ----~~~~~l~~~~~ 174 (273)
.+.....+++.
T Consensus 96 ~~~~~~w~~y~~liG 110 (281)
T 4e5v_A 96 DNAFSKWPEFNRICA 110 (281)
T ss_dssp GGSCTTCHHHHHHHS
T ss_pred cccCCCCHHHHHhee
Confidence 12244556666
No 253
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=26.03 E-value=2.9e+02 Score=23.05 Aligned_cols=70 Identities=10% Similarity=-0.062 Sum_probs=40.7
Q ss_pred HHHHHHHHHHc--CCccEEecCCC--------CHHHHHHHhhcCCceEEeeeccc---------ccccccccHHHHHHHh
Q 024050 143 TIGEMKKLVEE--GKIKYIGLSEA--------SPGTIRRAHAVHPITAVQMEWSL---------WTRDIEEEIIPLCREL 203 (273)
Q Consensus 143 ~~~~L~~l~~~--G~ir~iGvS~~--------~~~~l~~~~~~~~~~~~q~~~~l---------~~~~~~~~l~~~~~~~ 203 (273)
..+.+.++.++ +++..+|+-.. ..+.|+++++...+..+.+..+. ++...-..+++.|.++
T Consensus 92 ~N~~~~~~~~~~p~rf~~~~~~p~~~~~~~~~a~~eL~r~~~~~g~~Gv~l~~~~~~~~~~~~~l~d~~~~p~~~~a~e~ 171 (350)
T 2gwg_A 92 CNELCYRVSQLFPDNFIGAAMLPQSPGVDPKTCIPELEKCVKEYGFVAINLNPDPSGGHWTSPPLTDRIWYPIYEKMVEL 171 (350)
T ss_dssp HHHHHHHHHHHSTTTEEEEEECCCCTTSCGGGGHHHHHHHHHTSCCCEEEECSCTTSSCCCSCCTTSGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcEEEEEeCCCCCCCCHHHHHHHHHHHHhccCCeEEEECCCCCCccCCCCCCCCHHHHHHHHHHHHc
Confidence 44566666665 44555554332 12557776654445555553221 1111127899999999
Q ss_pred CCeEEeccc
Q 024050 204 GIGIVPYSP 212 (273)
Q Consensus 204 gi~v~a~sp 212 (273)
|+.|+....
T Consensus 172 ~lpv~iH~~ 180 (350)
T 2gwg_A 172 EIPAMIHVS 180 (350)
T ss_dssp TCCEEECCC
T ss_pred CCeEEECCC
Confidence 999998754
No 254
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=25.76 E-value=1.5e+02 Score=24.55 Aligned_cols=43 Identities=9% Similarity=0.084 Sum_probs=25.4
Q ss_pred CHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCC
Q 024050 106 APDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGK 155 (273)
Q Consensus 106 ~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ 155 (273)
+.+.+.+.++..++ .-+.+|++.+..|... -.+...++.+.||
T Consensus 55 ~~~~ll~~~~~l~~--~~~~vD~V~I~tP~~~-----H~~~~~~al~aGk 97 (312)
T 3o9z_A 55 EPEAFEAYLEDLRD--RGEGVDYLSIASPNHL-----HYPQIRMALRLGA 97 (312)
T ss_dssp CHHHHHHHHHHHHH--TTCCCSEEEECSCGGG-----HHHHHHHHHHTTC
T ss_pred CHHHHHHHhhhhcc--cCCCCcEEEECCCchh-----hHHHHHHHHHCCC
Confidence 45555544443333 4578999999988541 2344455667786
No 255
>3fxg_A Rhamnonate dehydratase; structural gemomics, enolase superfamily, NYSGXRC, target 9265J, lyase, structural genomics, PSI-2; 1.90A {Gibberella zeae ph-1} PDB: 2p0i_A
Probab=25.65 E-value=86 Score=28.10 Aligned_cols=70 Identities=13% Similarity=0.086 Sum_probs=50.7
Q ss_pred HHHHHHHHHHcC-Cc-cEEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-ccHHHHHHHhCCeEEeccc
Q 024050 143 TIGEMKKLVEEG-KI-KYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSP 212 (273)
Q Consensus 143 ~~~~L~~l~~~G-~i-r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l~~~~~~~gi~v~a~sp 212 (273)
-++.+.+|.++- .+ -+.|=+.++...+.++++...++++|+..+-.---.+ ..+...|+.+||.+....+
T Consensus 255 d~~~la~L~~~~~~iPIA~gEs~~s~~d~~~li~~~avDiiq~d~~~~GGItea~kIa~lA~a~Gv~v~~H~~ 327 (455)
T 3fxg_A 255 DTDGFALIKRAHPTVKFTTGEHEYSRYGFRKLVEGRNLDIIQPDVMWLGGLTELLKVAALAAAYDVPVVPHAS 327 (455)
T ss_dssp GGGGHHHHHHHCTTSEEEECTTCCHHHHHHHHHTTCCCSEECCCTTTSSCHHHHHHHHHHHHTTTCCBCCCSC
T ss_pred hHHHHHHHHHhCCCCeEECCCccCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCEEEecch
Confidence 466677777653 23 4556677888889999988888999998776542111 6789999999999986543
No 256
>3ijl_A Muconate cycloisomerase; enolase superfamily, dipeptide epimerase, L-Pro-D-Glu, nonpr binding; HET: DGL; 1.50A {Bacteroides thetaiotaomicron} PDB: 3iji_A* 3ijq_A*
Probab=25.63 E-value=1.3e+02 Score=25.58 Aligned_cols=85 Identities=9% Similarity=0.119 Sum_probs=52.1
Q ss_pred ccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-ccHHHHHHHh
Q 024050 126 IDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEIIPLCREL 203 (273)
Q Consensus 126 iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l~~~~~~~ 203 (273)
.++.++..|-...+ ++.+.+|.++-.+- +.|=|-++...+.++. ...+++|+..+..---.+ ..+...|+++
T Consensus 200 ~~i~~iEeP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~--~a~d~i~~k~~~~GGit~~~~ia~~A~~~ 273 (338)
T 3ijl_A 200 KGIVMIEQPMPKEQ----LDDIAWVTQQSPLPVFADESLQRLGDVAALK--GAFTGINIKLMKCTGMREAWKMVTLAHAL 273 (338)
T ss_dssp TTEEEEECCSCTTC----HHHHHHHHHTCSSCEEESTTCCSGGGTGGGB--TTBSEEEECHHHHTSHHHHHHHHHHHHHT
T ss_pred CCCCEEECCCCCCc----HHHHHHHHhcCCCCEEECCCCCCHHHHHHHH--hhCCEEEecccccCCHHHHHHHHHHHHHc
Confidence 45777777754333 45666676654443 3444556666555543 346677765554321111 6689999999
Q ss_pred CCeEEecccCCCc
Q 024050 204 GIGIVPYSPLGRG 216 (273)
Q Consensus 204 gi~v~a~spl~~G 216 (273)
|+.++..+.+..+
T Consensus 274 gi~~~~~~~~es~ 286 (338)
T 3ijl_A 274 GMRVMVGCMTETS 286 (338)
T ss_dssp TCEEEECCCSCCH
T ss_pred CCEEEecCCcccH
Confidence 9999988776544
No 257
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=25.53 E-value=3.1e+02 Score=23.30 Aligned_cols=153 Identities=10% Similarity=-0.018 Sum_probs=88.9
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASL 118 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL 118 (273)
+.++..+....+.+.|++.|=.--........+.+. ++++.-..++.|..-... .++.+...+-+++ |
T Consensus 144 ~~~~~~~~a~~~~~~G~~~~KiKvG~~~~~d~~~v~-avr~a~g~~~~l~vDaN~----------~~~~~~a~~~~~~-l 211 (372)
T 3cyj_A 144 PLRRLQEQLGGWAAAGIPRVKMKVGREPEKDPERVR-AAREAIGESVELMVDANG----------AYTRKQALYWAGA-F 211 (372)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSSGGGHHHHHH-HHHHHHCTTSEEEEECTT----------CSCHHHHHHHHHH-H
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHH-HHHHHhCCCCeEEEECCC----------CCCHHHHHHHHHH-H
Confidence 457777788888899998764321101112334443 444311124444443321 2455555444443 5
Q ss_pred HHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCc---cEEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-c
Q 024050 119 KRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI---KYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-E 194 (273)
Q Consensus 119 ~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~i---r~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~ 194 (273)
+.+ .++.++..|-... .++.+.+|.++-.+ -..|=|.++...+.++ ....+++|+..+-.---.+ .
T Consensus 212 ~~~----~~i~~iEqP~~~~----d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~--~~a~d~i~ik~~~~GGit~~~ 281 (372)
T 3cyj_A 212 ARE----AGISYLEEPVSSE----DREGLRLLRDRGPGGVAIAAGEYEWTLPQLHDL--AGCVDILQADVTRCGGITGLL 281 (372)
T ss_dssp HHH----HCCCEEECSSCTT----CHHHHHHHHHHSCTTCEEEECTTCCSHHHHHHH--HTTCSEEEECTTTTTHHHHHT
T ss_pred Hhh----cCCcEEECCCCcc----cHHHHHHHHHhCCCCCCEECCCCccCHHHHHHH--hCCCCEEecCchhhCCHHHHH
Confidence 554 1566777775433 35566667665432 2334466788888887 5567888887776532112 6
Q ss_pred cHHHHHHHhCCeEEecccC
Q 024050 195 EIIPLCRELGIGIVPYSPL 213 (273)
Q Consensus 195 ~l~~~~~~~gi~v~a~spl 213 (273)
.+...|+++|+.++..+.+
T Consensus 282 ~i~~~A~~~gi~~~~~~~~ 300 (372)
T 3cyj_A 282 RVDGICRGHQIPFSAHCAP 300 (372)
T ss_dssp THHHHHHHHTCCEEECSCH
T ss_pred HHHHHHHHcCCeecccchH
Confidence 7999999999999988754
No 258
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=25.40 E-value=97 Score=24.91 Aligned_cols=21 Identities=24% Similarity=0.295 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHCCCCcccc
Q 024050 40 EEDGISMIKHAFSKGITFFDT 60 (273)
Q Consensus 40 ~~~~~~~l~~A~~~Gin~~Dt 60 (273)
+|.....++.|++.|...|.+
T Consensus 25 PENTl~Af~~A~~~Gad~iE~ 45 (252)
T 2pz0_A 25 PENTIAAFKRAMELGADGIEL 45 (252)
T ss_dssp CTTSHHHHHHHHHHTCSEEEE
T ss_pred CcchHHHHHHHHHcCCCEEEE
Confidence 567788999999999987764
No 259
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=25.18 E-value=1.3e+02 Score=26.51 Aligned_cols=69 Identities=7% Similarity=-0.059 Sum_probs=47.2
Q ss_pred HHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeeccccccccc-ccHHHHHHHhCCeEEeccc
Q 024050 144 IGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE-EEIIPLCRELGIGIVPYSP 212 (273)
Q Consensus 144 ~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~-~~l~~~~~~~gi~v~a~sp 212 (273)
++.+.++++.-.|- ..|=+-++++.++++++....+++|+..+-.---.+ ..+...|+++|+.+..+++
T Consensus 268 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ga~d~v~~k~~~~GGit~~~~ia~~A~~~gi~v~~h~~ 338 (426)
T 4e4f_A 268 QACFRLIRQHTVTPIAVGEVFNSIWDCKQLIEEQLIDYIRTTITHAGGITGMRRIADFASLYQVRTGSHGP 338 (426)
T ss_dssp GGGGHHHHTTCCSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEEEECCC
T ss_pred HHHHHHHHhcCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEeeeCC
Confidence 45566666654443 223345678888888888888889887766542111 6789999999999877654
No 260
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=25.16 E-value=1.7e+02 Score=23.13 Aligned_cols=37 Identities=14% Similarity=0.119 Sum_probs=25.0
Q ss_pred ccCcceeccccCCCCCCCCCCHHHHHHHHHHHHHCCCCcccccc
Q 024050 19 EVSKLGYGCMNLSGGYSSPVSEEDGISMIKHAFSKGITFFDTAD 62 (273)
Q Consensus 19 ~vs~lglG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DtA~ 62 (273)
...++|+-++.+.. .....+.++.+-+.|+..++...
T Consensus 3 ~~~~lg~~~~~~~~-------~~~~~~~l~~~~~~G~~~vEl~~ 39 (275)
T 3qc0_A 3 QVEGLSINLATIRE-------QCGFAEAVDICLKHGITAIAPWR 39 (275)
T ss_dssp CCTTEEEEGGGGTT-------TCCHHHHHHHHHHTTCCEEECBH
T ss_pred CcccceeeeeeccC-------CCCHHHHHHHHHHcCCCEEEecc
Confidence 34567777766521 12355678888999999998764
No 261
>4ggi_A UDP-2,3-diacylglucosamine pyrophosphatase LPXI; structural genomics, PSI-biology; HET: UDG; 2.52A {Caulobacter crescentus} PDB: 4ggm_X*
Probab=25.12 E-value=89 Score=25.94 Aligned_cols=45 Identities=22% Similarity=0.210 Sum_probs=34.2
Q ss_pred HHHHHHHhhcCC-ceEEeeecccccccccccHHHHHHHhCCeEEeccc
Q 024050 166 PGTIRRAHAVHP-ITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSP 212 (273)
Q Consensus 166 ~~~l~~~~~~~~-~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~sp 212 (273)
++.++.+.+..- -.++|.--|++-++ ++++++|.++||.+++..|
T Consensus 234 ~dti~~~~~ag~~~ivi~~g~si~~~~--~~~i~~a~~~gi~~~~~~~ 279 (283)
T 4ggi_A 234 VATIHRAARAGLAGIVGEAGRLLVVDR--EAVIAAADDLGLFVLGVDP 279 (283)
T ss_dssp HHHHHHHHHTTCCEEEEETTBCEETTH--HHHHHHHHHHTCEEEEECC
T ss_pred HHHHHHHHHcCCeEEEEcCCCcEEeCH--HHHHHHHHHcCCEEEEeCC
Confidence 477777777643 33578888886554 6799999999999998765
No 262
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=24.97 E-value=1.5e+02 Score=24.76 Aligned_cols=34 Identities=3% Similarity=-0.087 Sum_probs=22.9
Q ss_pred HHHHHH-HHHHHcCCccEEecCCCCHHHHHHHhhc
Q 024050 142 ETIGEM-KKLVEEGKIKYIGLSEASPGTIRRAHAV 175 (273)
Q Consensus 142 ~~~~~L-~~l~~~G~ir~iGvS~~~~~~l~~~~~~ 175 (273)
+..+.+ +.+++.|....+=+++|+.+.+.++.+.
T Consensus 165 ~~~~~v~~~l~~~~~~~~v~i~SF~~~~l~~~~~~ 199 (313)
T 3l12_A 165 EMVAAVLADVRRYRMEPRTVMHSFDWALLGECRRQ 199 (313)
T ss_dssp HHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCEEEEcCCHHHHHHHHHH
Confidence 444444 3345567777788889998888877654
No 263
>1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3
Probab=24.82 E-value=1.7e+02 Score=24.35 Aligned_cols=104 Identities=17% Similarity=0.174 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHHcCCCcccEEEecCCCCCC----CHHHHHHHHHHHHHcCC-ccEEecCCC------CHHHHHHHhhc
Q 024050 107 PDYVRSCCEASLKRLDVDYIDLYYQHRVDTSV----PIEETIGEMKKLVEEGK-IKYIGLSEA------SPGTIRRAHAV 175 (273)
Q Consensus 107 ~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~----~~~~~~~~L~~l~~~G~-ir~iGvS~~------~~~~l~~~~~~ 175 (273)
++.+..+++...+.- ... .+++.....+. .....++.++.|++.|. |..||+-.| +.+.++..++.
T Consensus 149 ~~~i~~af~~Ar~~d--P~a-~L~~Ndyn~~~~~~~k~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~~~~~~~~~~l~~ 225 (303)
T 1ta3_B 149 EDFVRIAFETARAAD--PDA-KLYINDYNLDSASYAKTQAMASYVKKWLAEGVPIDGIGSQAHYSSSHWSSTEAAGALSS 225 (303)
T ss_dssp THHHHHHHHHHHHHC--TTS-EEEEEESCCCCTTSHHHHHHHHHHHHHHHTTCCCCEEEECCEECTTCCCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHC--CCC-EEEeccccccCCchHHHHHHHHHHHHHHHCCCCcceEEEeeecCCCCCCHHHHHHHHHH
Confidence 466777777666542 112 23333222221 13456777888999998 899998332 22444444332
Q ss_pred ---CCc-eEEeeeccccccccc--ccHHHHHHHhC--CeEEecccC
Q 024050 176 ---HPI-TAVQMEWSLWTRDIE--EEIIPLCRELG--IGIVPYSPL 213 (273)
Q Consensus 176 ---~~~-~~~q~~~~l~~~~~~--~~l~~~~~~~g--i~v~a~spl 213 (273)
..+ .+.-.++.+-..+.+ ..+++.|.++. ++|+.|+.-
T Consensus 226 ~a~~G~~pi~iTEldi~~~qa~~y~~~~~~~~~~~~v~git~Wg~~ 271 (303)
T 1ta3_B 226 LANTGVSEVAITELDIAGAASSDYLNLLNACLNEQKCVGITVWGVS 271 (303)
T ss_dssp HHTTCCSEEEEEEEEETTCCHHHHHHHHHHHHTCTTEEEEEESCSB
T ss_pred HHHCCCCeEEEeeCCcChhHHHHHHHHHHHHHhCCCceEEEEecCC
Confidence 122 223333333322222 67889998875 667777543
No 264
>3dc8_A Dihydropyrimidinase; TIM-barrel, hydrolase; HET: KCX; 1.85A {Sinorhizobium meliloti}
Probab=24.78 E-value=3.7e+02 Score=23.86 Aligned_cols=109 Identities=16% Similarity=0.057 Sum_probs=51.5
Q ss_pred CHHHHHHHHHHHHHCCCC-ccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGIT-FFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEAS 117 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin-~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~s 117 (273)
+.+......+.|+..|++ ++|+............+..+.+...+..+-+..-..... .+. ...+.+.+.
T Consensus 68 ~~e~~~~~~~aa~~~GvTtv~~~~~~~p~~~~~~~~~~~~~~a~~~~~d~~~~~~~~~---------~~~-~~l~el~~l 137 (490)
T 3dc8_A 68 SSDDFESGTRAALAGGTTMVVDFALPSPGQSLLEALTMWDNKSTRANCDYSFHMAITW---------WGE-QVFNEMETI 137 (490)
T ss_dssp CSCCHHHHHHHHHHTTEEEEEEEECCC-CCCHHHHHHHHHHHTTTCSSEEEEEEECCS---------CSH-HHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCEEeecccCCCCCCcCHHHHHHHHHHHhhcccceeeeEEEEec---------CcH-HHHHHHHHH
Confidence 455667777888999997 456543322223344454444422222111111111110 112 223445555
Q ss_pred HHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc
Q 024050 118 LKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK 157 (273)
Q Consensus 118 L~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir 157 (273)
.++-|...+-+++-.......+.++..++|+.+.+.|..-
T Consensus 138 ~~~~G~~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v 177 (490)
T 3dc8_A 138 VKDKGINTFKHFMAYKGALMVDDDEMFSSFQRCAALGALP 177 (490)
T ss_dssp HHHSCCCEEEEESCSTTTTBCCHHHHHHHHHHHHHHTCEE
T ss_pred HHhCCCCEEEEEecCCCCccCCHHHHHHHHHHHHhcCCEE
Confidence 5456665554443221111234566677777777777653
No 265
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=24.75 E-value=3.4e+02 Score=23.39 Aligned_cols=182 Identities=12% Similarity=0.018 Sum_probs=86.7
Q ss_pred CCCHHHHHHHHHHHHHCCCCccccccCC-CCCcHHHHHHHHHhcCCCCCEEEEeccCcCC----------CCCc------
Q 024050 37 PVSEEDGISMIKHAFSKGITFFDTADVY-GQNANEVLLGKALKQLPREKIQVATKFGIAG----------IGVA------ 99 (273)
Q Consensus 37 ~~~~~~~~~~l~~A~~~Gin~~DtA~~Y-g~g~se~~lg~~l~~~~r~~~~i~tK~~~~~----------~~~~------ 99 (273)
.++.++-.++.+..-+.|+..|+..... .+++. +.+-+..+..+...+...+...... .+..
T Consensus 30 ~~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~-e~v~~i~~~~~~~~i~~l~r~~~~di~~a~~al~~ag~~~v~if~ 108 (370)
T 3rmj_A 30 AMTKEEKIRVARQLEKLGVDIIEAGFAAASPGDF-EAVNAIAKTITKSTVCSLSRAIERDIRQAGEAVAPAPKKRIHTFI 108 (370)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEEEGGGCHHHH-HHHHHHHTTCSSSEEEEEEESSHHHHHHHHHHHTTSSSEEEEEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEeCCCCCHHHH-HHHHHHHHhCCCCeEEEEecCCHHHHHHHHHHHhhCCCCEEEEEe
Confidence 4578999999999999999999986432 21111 2333333323222332222110000 0000
Q ss_pred ---c----ccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCC-CCCHHHHHHHHHHHHHcCCccEEecCC----CCHH
Q 024050 100 ---G----VIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDT-SVPIEETIGEMKKLVEEGKIKYIGLSE----ASPG 167 (273)
Q Consensus 100 ---~----~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~-~~~~~~~~~~L~~l~~~G~ir~iGvS~----~~~~ 167 (273)
. ...+.+.+.+.+.+.++.+...-.-.+ +.+..++. ..+.+.+++.++.+.+.|- ..|.++. ..|.
T Consensus 109 ~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~-v~~~~ed~~r~~~~~~~~~~~~~~~~Ga-~~i~l~DT~G~~~P~ 186 (370)
T 3rmj_A 109 ATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDD-VEFSCEDALRSEIDFLAEICGAVIEAGA-TTINIPDTVGYSIPY 186 (370)
T ss_dssp ECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSC-EEEEEETGGGSCHHHHHHHHHHHHHHTC-CEEEEECSSSCCCHH
T ss_pred cCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCE-EEEecCCCCccCHHHHHHHHHHHHHcCC-CEEEecCccCCcCHH
Confidence 0 001234444444444444444321122 23333322 2445667777777777775 4576664 3465
Q ss_pred HHHHHhhc----CCc-eEEeeecccccccc-cccHHHHHHHhCCeEEecccCCCccCCCC
Q 024050 168 TIRRAHAV----HPI-TAVQMEWSLWTRDI-EEEIIPLCRELGIGIVPYSPLGRGFFGGK 221 (273)
Q Consensus 168 ~l~~~~~~----~~~-~~~q~~~~l~~~~~-~~~l~~~~~~~gi~v~a~spl~~G~L~~~ 221 (273)
.+.++++. .+- +-+.+.+|.-+..- -..-.-.|-+.|+..+--+..+-|--+|.
T Consensus 187 ~~~~lv~~l~~~~~~~~~~~l~~H~Hnd~GlAvAN~laAv~aGa~~vd~tv~GlGeraGN 246 (370)
T 3rmj_A 187 KTEEFFRELIAKTPNGGKVVWSAHCHNDLGLAVANSLAALKGGARQVECTVNGLGERAGN 246 (370)
T ss_dssp HHHHHHHHHHHHSTTGGGSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEBGGGCSSTTCB
T ss_pred HHHHHHHHHHHhCCCcCceEEEEEeCCCCChHHHHHHHHHHhCCCEEEEeccccCccccc
Confidence 55444332 321 11223333322211 02223344577888887777776665553
No 266
>3ch0_A Glycerophosphodiester phosphodiesterase; YP_677622.1, glycerophosphoryl diester phosphodiesterase, ST genomics; HET: MSE CIT GOL; 1.50A {Cytophaga hutchinsonii atcc 33406}
Probab=24.73 E-value=1.8e+02 Score=23.48 Aligned_cols=60 Identities=15% Similarity=0.265 Sum_probs=36.2
Q ss_pred HHHHcCCccEEecCCCCHHHHHHHhhcCC-c-----------------------eEEeeecccccccccccHHHHHHHhC
Q 024050 149 KLVEEGKIKYIGLSEASPGTIRRAHAVHP-I-----------------------TAVQMEWSLWTRDIEEEIIPLCRELG 204 (273)
Q Consensus 149 ~l~~~G~ir~iGvS~~~~~~l~~~~~~~~-~-----------------------~~~q~~~~l~~~~~~~~l~~~~~~~g 204 (273)
.+++.|.-+.+=+++|+++.+..+.+..+ + ..+...+..+ ..++++.++++|
T Consensus 161 ~l~~~~~~~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~v~~~~~~G 236 (272)
T 3ch0_A 161 EIKKAHITDRFTLQSFDVRALEYMHSQYPDIKLSYLVETKGTLKKQLEKLSFTPAVYSPDVTLV----SKKDIDAAHKLG 236 (272)
T ss_dssp HHHHTTCGGGEEEEESCHHHHHHHHHHCTTSEEEEEECSSCCHHHHHTTSSSCCSEEEEBGGGC----CHHHHHHHHHTT
T ss_pred HHHHcCCCCcEEEEeCCHHHHHHHHHHCCCCcEEEEecCCCCHHHHHHHcCCCCcEEccchhhc----CHHHHHHHHHcC
Confidence 33445666667788888877776655421 1 1111122211 256889999999
Q ss_pred CeEEeccc
Q 024050 205 IGIVPYSP 212 (273)
Q Consensus 205 i~v~a~sp 212 (273)
+.|.+|..
T Consensus 237 l~v~~wTv 244 (272)
T 3ch0_A 237 MRVIPWTV 244 (272)
T ss_dssp CEECCBCC
T ss_pred CEEEEecc
Confidence 99998864
No 267
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=24.40 E-value=3.4e+02 Score=23.36 Aligned_cols=98 Identities=12% Similarity=0.040 Sum_probs=55.8
Q ss_pred HHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHH-HHcCCccEEecCCCCHHHHHHHhhc-CCceEEeeecccccc
Q 024050 113 CCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKL-VEEGKIKYIGLSEASPGTIRRAHAV-HPITAVQMEWSLWTR 190 (273)
Q Consensus 113 ~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l-~~~G~ir~iGvS~~~~~~l~~~~~~-~~~~~~q~~~~l~~~ 190 (273)
++...+..+ +..=|-+++-.+.. ......+..+ ...| ++.+-+...+.+.++++++. .+..++..+.|+.-.
T Consensus 108 Ai~~al~~l-~~~Gd~Vi~~~~~y----~~~~~~~~~~~~~~g-~~~~~v~~~d~~~l~~ai~~~t~~v~le~p~NptG~ 181 (414)
T 3ndn_A 108 AVFTSLGAL-LGAGDRLVAARSLF----GSCFVVCSEILPRWG-VQTVFVDGDDLSQWERALSVPTQAVFFETPSNPMQS 181 (414)
T ss_dssp HHHHHHHTT-CCTTCEEEEESCCC----HHHHHHHHTHHHHTT-CEEEEECTTCHHHHHHHTSSCCSEEEEESSCTTTCC
T ss_pred HHHHHHHHH-hCCCCEEEEcCCcc----chHHHHHHHHHHHcC-cEEEEeCCCCHHHHHHhcCCCCeEEEEECCCCCCCc
Confidence 344444444 23335566555432 3344444442 2333 33344444478888887754 456666666666543
Q ss_pred ccc-ccHHHHHHHhCCeEEecccCCCc
Q 024050 191 DIE-EEIIPLCRELGIGIVPYSPLGRG 216 (273)
Q Consensus 191 ~~~-~~l~~~~~~~gi~v~a~spl~~G 216 (273)
... .++.+.|+++|+.++.=..++.|
T Consensus 182 ~~~l~~i~~la~~~g~~livDe~~~~~ 208 (414)
T 3ndn_A 182 LVDIAAVTELAHAAGAKVVLDNVFATP 208 (414)
T ss_dssp CCCHHHHHHHHHHTTCEEEEECTTTHH
T ss_pred cccHHHHHHHHHHcCCEEEEECCCccc
Confidence 322 78999999999999875555544
No 268
>2opj_A O-succinylbenzoate-COA synthase; TIM barrel, structural genomics, protein structure initiative; 1.60A {Thermobifida fusca} PDB: 2qvh_A*
Probab=24.35 E-value=1.2e+02 Score=25.56 Aligned_cols=83 Identities=13% Similarity=0.128 Sum_probs=42.7
Q ss_pred ccEEEecCCCCCCCHHHHHHHHHHHHHcCCcc-EEecCCCCHHHHHHHhhcCCceEEeeecccccccccccHHHHHHHhC
Q 024050 126 IDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELG 204 (273)
Q Consensus 126 iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir-~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~~~l~~~~~~~g 204 (273)
.++.++..|-. + ++.+.+|.++-.+- ..|=|-++...+.++++...++++|+..+..-- -.+.++.|+..|
T Consensus 150 ~~l~~iEqP~~--~----~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~~a~d~i~ik~~~~GG--it~~~~ia~~~g 221 (327)
T 2opj_A 150 FELEYVEQPCA--T----VDELAEVRRRVSVPIAADESIRRAEDPLRVRDAEAADVVVLKVQPLGG--VRAALRLAEECG 221 (327)
T ss_dssp GCEEEEECCSS--S----HHHHHHHHHHCSSCEEC-----------CTTTTTCCSBEEECHHHHTS--HHHHHHHHHHTC
T ss_pred cCCcEEeCCCC--C----HHHHHHHHhhCCCCEEcCCCCCCHHHHHHHHHhCCCCEEEeCccccCC--HHHHHHHHHHcC
Confidence 45666666643 1 45566665543322 223334455555555555666777776544322 145677888899
Q ss_pred CeEEecccCCCc
Q 024050 205 IGIVPYSPLGRG 216 (273)
Q Consensus 205 i~v~a~spl~~G 216 (273)
+.++..+.+..+
T Consensus 222 i~~~~~~~~es~ 233 (327)
T 2opj_A 222 LPVVVSSAVETS 233 (327)
T ss_dssp SCEEEBCCSCCH
T ss_pred CcEEEcCCCcCH
Confidence 999888776544
No 269
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=24.04 E-value=2.6e+02 Score=21.80 Aligned_cols=147 Identities=14% Similarity=0.116 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCccccccCCHHHHHH------H
Q 024050 40 EEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAGVIVKGAPDYVRS------C 113 (273)
Q Consensus 40 ~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~------~ 113 (273)
+|.....++.|++.|+..|.+-=.- .++...|...=.... .+...+.+.+.+++ .
T Consensus 21 PENTl~Af~~A~~~G~d~iE~DV~l----------------T~Dg~lVv~HD~~l~---~g~v~~~t~~eL~~l~~~ipt 81 (224)
T 1vd6_A 21 KENTLESFRLALEAGLDGVELDVWP----------------TRDGVFAVRHDPDTP---LGPVFQVDYADLKAQEPDLPR 81 (224)
T ss_dssp CTTSHHHHHHHHHTTCSEEEEEEEE----------------CTTSCEEECSCSEET---TEEGGGSCHHHHHHHSTTCCB
T ss_pred CcchHHHHHHHHHcCCCEEEEEeeE----------------ecCCcEEEECCCccC---CCChhhCCHHHHHhcCCCCCC
Confidence 5778899999999999877653221 122222222110000 01234566777764 4
Q ss_pred HHHHHHHcC-CCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcCC-ce------------
Q 024050 114 CEASLKRLD-VDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHP-IT------------ 179 (273)
Q Consensus 114 ~~~sL~~L~-~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~-~~------------ 179 (273)
+++.|+.+. -..+ .+.+.--.......+..+.+.++.++ -..+=+++|+++.+..+.+..+ +.
T Consensus 82 L~evl~~~~~~~~~-~l~iEiK~~~~~~~~~~~~v~~~l~~--~~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~ 158 (224)
T 1vd6_A 82 LEEVLALKEAFPQA-VFNVELKSFPGLGEEAARRLAALLRG--REGVWVSSFDPLALLALRKAAPGLPLGFLMAEDHSAL 158 (224)
T ss_dssp HHHHHGGGGTCTTC-EEEEEECCCTTSHHHHHHHHHHHTTT--CSSEEEEESCHHHHHHHHHHCTTSCEEEEESSCCGGG
T ss_pred HHHHHHhhhccCCc-eEEEEECCCCCccHHHHHHHHHHHhc--CCcEEEEeCCHHHHHHHHHHCCCCCEEEEeccccHHH
Confidence 778887775 1111 12332111112222344455555544 4456688899988877765421 11
Q ss_pred -------EEeeecccccccccccHHHHHHHhCCeEEeccc
Q 024050 180 -------AVQMEWSLWTRDIEEEIIPLCRELGIGIVPYSP 212 (273)
Q Consensus 180 -------~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~sp 212 (273)
.+...++.+ ..++++.++++|+.|.+|.+
T Consensus 159 ~~~~~~~~i~~~~~~~----~~~~v~~~~~~G~~v~~wtv 194 (224)
T 1vd6_A 159 LPCLGVEAVHPHHALV----TEEAVAGWRKRGLFVVAWTV 194 (224)
T ss_dssp GGGSCCSEEEEBGGGC----CHHHHHHHHHTTCEEEEECC
T ss_pred HHHcCCcEEecCcccC----CHHHHHHHHHCCCEEEEEeC
Confidence 111111111 25689999999999999964
No 270
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=23.97 E-value=3.3e+02 Score=23.11 Aligned_cols=79 Identities=9% Similarity=0.050 Sum_probs=42.9
Q ss_pred cEEEecCCCCCCCHHHHHHHHHHHHHcC-CccEEecC--CC--CHHHHHHHhhc-CCceEEeeecccccccccccHHHHH
Q 024050 127 DLYYQHRVDTSVPIEETIGEMKKLVEEG-KIKYIGLS--EA--SPGTIRRAHAV-HPITAVQMEWSLWTRDIEEEIIPLC 200 (273)
Q Consensus 127 Dl~~lh~~~~~~~~~~~~~~L~~l~~~G-~ir~iGvS--~~--~~~~l~~~~~~-~~~~~~q~~~~l~~~~~~~~l~~~~ 200 (273)
|-+++..|.... ....+ ...| ++..+-+. ++ +++.++++++. .+..++..+.... ....++.++|
T Consensus 91 d~Vlv~~~~~~~----~~~~~---~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~tG~~--~~l~~i~~la 161 (424)
T 2po3_A 91 GEVIMPSMTFAA----TPHAL---RWIGLTPVFADIDPDTGNLDPDQVAAAVTPRTSAVVGVHLWGRP--CAADQLRKVA 161 (424)
T ss_dssp SEEEEESSSCTH----HHHHH---HHTTCEEEEECBCTTTSSBCHHHHGGGCCTTEEEEEEECGGGCC--CCHHHHHHHH
T ss_pred CEEEECCCccHH----HHHHH---HHcCCEEEEEecCCCcCCcCHHHHHHhhCcCCcEEEEECCCCCc--CCHHHHHHHH
Confidence 777777775421 22222 2234 56666665 22 66777666542 1222221122111 1127899999
Q ss_pred HHhCCeEEecccCC
Q 024050 201 RELGIGIVPYSPLG 214 (273)
Q Consensus 201 ~~~gi~v~a~spl~ 214 (273)
+++|+-++.=...+
T Consensus 162 ~~~~~~li~Dea~~ 175 (424)
T 2po3_A 162 DEHGLRLYFDAAHA 175 (424)
T ss_dssp HHTTCEEEEECTTC
T ss_pred HHcCCEEEEECccc
Confidence 99999988655554
No 271
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=23.89 E-value=1.2e+02 Score=24.36 Aligned_cols=58 Identities=16% Similarity=0.185 Sum_probs=35.7
Q ss_pred HcCCccEEecCCCCHHHHHHHhhcCC----------------------ceEEeeecccccccccccHHHHHHHhCCeEEe
Q 024050 152 EEGKIKYIGLSEASPGTIRRAHAVHP----------------------ITAVQMEWSLWTRDIEEEIIPLCRELGIGIVP 209 (273)
Q Consensus 152 ~~G~ir~iGvS~~~~~~l~~~~~~~~----------------------~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a 209 (273)
+.|.-..+=++.|+++.+..+.+..+ +..+...++.+. ..++++.++++|+.|.+
T Consensus 123 ~~~~~~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~v~~~~~~G~~v~~ 199 (248)
T 1zcc_A 123 HLGMVRDTFYFSFSEEMRQGLQSIAPEFRRMMTLDIAKSPSLVGAVHHASIIEITPAQMR---RPGIIEASRKAGLEIMV 199 (248)
T ss_dssp HHTCSTTEEEECSCHHHHHHHHHHCTTSEEEEEHHHHSSTHHHHHTTCCSEEEECHHHHH---SHHHHHHHHHHTCEEEE
T ss_pred HhCCCCCEEEEECCHHHHHHHHHHCCCCcEEEEecCCccHHHHHHHcCCCEEEecHHHhC---CHHHHHHHHHCCCEEEE
Confidence 33555666678888877766654321 122222332220 25688999999999999
Q ss_pred ccc
Q 024050 210 YSP 212 (273)
Q Consensus 210 ~sp 212 (273)
|.+
T Consensus 200 wTv 202 (248)
T 1zcc_A 200 YYG 202 (248)
T ss_dssp ECC
T ss_pred ECC
Confidence 964
No 272
>2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A
Probab=23.84 E-value=2.1e+02 Score=24.46 Aligned_cols=97 Identities=14% Similarity=0.154 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCC---CH-HHHHHHhhcCCceEEeeec
Q 024050 110 VRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEA---SP-GTIRRAHAVHPITAVQMEW 185 (273)
Q Consensus 110 i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~---~~-~~l~~~~~~~~~~~~q~~~ 185 (273)
..+.++..++ .. +.+.-+=++.++.. .+...+.++..++.|.--.+=++.. ++ ..+.+++.......+-.-+
T Consensus 188 ~~~~~~~a~~-~~-~~vvg~dl~g~e~~--~~~~~~~~~~A~~~gl~~~~HagE~~~~~~~~~i~~al~~lg~~ri~Hgv 263 (371)
T 2pgf_A 188 IKASADFCLK-HK-ADFVGFDHGGHEVD--LKEYKEIFDYVRESGVPLSVHAGEDVTLPNLNTLYSAIQVLKVERIGHGI 263 (371)
T ss_dssp HHHHHHHHHH-TT-TTEEEEEEEESCCC--GGGGHHHHHHHHHTTCCBEEEESCCTTSSSSHHHHHHHHTSCCSEEEECG
T ss_pred HHHHHHHHHh-CC-CCEEEEecCCCccc--HHHHHHHHHHHHHcCCcEEEeeCCCCCCCchHHHHHHHhccCCCEEecch
Confidence 3444454444 22 33444444555443 4455667777788887555544432 44 5666666653333332222
Q ss_pred ccccccccccHHHHHHHhCCeEEecccCC
Q 024050 186 SLWTRDIEEEIIPLCRELGIGIVPYSPLG 214 (273)
Q Consensus 186 ~l~~~~~~~~l~~~~~~~gi~v~a~spl~ 214 (273)
.+.+ ...+++.++++||.+.. .|..
T Consensus 264 ~l~~---~~~l~~~l~~~~i~v~~-cP~S 288 (371)
T 2pgf_A 264 RVAE---SQELIDMVKEKNILLEV-CPIS 288 (371)
T ss_dssp GGGG---CHHHHHHHHHTTCEEEE-CHHH
T ss_pred hccc---cHHHHHHHHHcCCeEEE-Ccch
Confidence 2221 25689999999999854 4654
No 273
>4f3h_A Fimxeal, putative uncharacterized protein; fimxeal-C-DI-GMP, type IV pilus, signaling protein; HET: C2E; 2.50A {Xanthomonas campestris PV} PDB: 4f48_A*
Probab=23.51 E-value=2.1e+02 Score=22.58 Aligned_cols=100 Identities=11% Similarity=0.076 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHHHcCCCcccEEEecCCCCC--CCHHHHHHHHHHHHHcCCccEEecCCCCH--HHHHHHhhcCCceEEe
Q 024050 107 PDYVRSCCEASLKRLDVDYIDLYYQHRVDTS--VPIEETIGEMKKLVEEGKIKYIGLSEASP--GTIRRAHAVHPITAVQ 182 (273)
Q Consensus 107 ~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~--~~~~~~~~~L~~l~~~G~ir~iGvS~~~~--~~l~~~~~~~~~~~~q 182 (273)
...+...+...+++.+++.-. +.+.-.+.. .+.....+.+..|++.|- .|.+.+|.. ..+..+.. .+++.+-
T Consensus 108 ~~~~~~~l~~~l~~~~~~~~~-l~lEitE~~~~~~~~~~~~~l~~L~~~G~--~ialDdfG~g~s~l~~L~~-l~~d~iK 183 (250)
T 4f3h_A 108 DPQMIDTIREQLAVYGVPGER-LWLQTPESKVFTHLRNAQQFLASVSAMGC--KVGLEQFGSGLDSFQLLAH-FQPAFLK 183 (250)
T ss_dssp CHHHHHHHHHHHHHTTCCGGG-EEEEEEHHHHHHSHHHHHHHHHHHHTTTC--EEEEEEETSSTHHHHHHTT-SCCSEEE
T ss_pred CcHHHHHHHHHHHHcCCCcce-EEEEEechhhhcCHHHHHHHHHHHHHCCC--EEEEeCCCCCchHHHHHhh-CCCCEEE
Confidence 455778899999998865332 223222111 234567889999999997 455555432 33444333 4566776
Q ss_pred eecccccc---c-----ccccHHHHHHHhCCeEEec
Q 024050 183 MEWSLWTR---D-----IEEEIIPLCRELGIGIVPY 210 (273)
Q Consensus 183 ~~~~l~~~---~-----~~~~l~~~~~~~gi~v~a~ 210 (273)
+.-++... + ....++..|++.|+.|+|-
T Consensus 184 iD~~~v~~~~~~~~~~~~l~~i~~~a~~l~~~viae 219 (250)
T 4f3h_A 184 LDRSITGDIASARESQEKIREITSRAQPTGILTVAE 219 (250)
T ss_dssp ECHHHHTTTTTCSHHHHHHHHTHHHHHHHTCEEEEC
T ss_pred ECHHHHHhHhcChhhHHHHHHHHHHHHHcCCEEEEe
Confidence 66444321 1 1267899999999999984
No 274
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=23.48 E-value=1.7e+02 Score=19.68 Aligned_cols=59 Identities=19% Similarity=0.294 Sum_probs=35.8
Q ss_pred HHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcC--CceEEeeecccccccccccHHHHHHHhCCeEEec
Q 024050 143 TIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVH--PITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPY 210 (273)
Q Consensus 143 ~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~--~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~ 210 (273)
+..+|....+.|++. .| ..+..++++.. .+.++-... ..+....+..+|.+++|+++.|
T Consensus 3 i~~~L~la~kagk~v-~G-----~~~v~kai~~gka~lViiA~D~---~~~~~~~i~~~c~~~~ip~~~~ 63 (99)
T 3j21_Z 3 LAFELRKAMETGKVV-LG-----SNETIRLAKTGGAKLIIVAKNA---PKEIKDDIYYYAKLSDIPVYEF 63 (99)
T ss_dssp HHHHHHHHHHSSCEE-ES-----HHHHHHHHHHTCCSEEEEECCC---CHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHhCCEe-EC-----HHHHHHHHHcCCccEEEEeCCC---CHHHHHHHHHHHHHcCCCEEEe
Confidence 456677778888864 23 34555666553 333333332 1222267888999999998766
No 275
>1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A
Probab=23.30 E-value=2.7e+02 Score=23.02 Aligned_cols=104 Identities=14% Similarity=0.213 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHcCCCcccEEEecCCCCCC----CHHHHHHHHHHHHHcCC-ccEEecCCC----CHHHHHHHhhc--
Q 024050 107 PDYVRSCCEASLKRLDVDYIDLYYQHRVDTSV----PIEETIGEMKKLVEEGK-IKYIGLSEA----SPGTIRRAHAV-- 175 (273)
Q Consensus 107 ~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~----~~~~~~~~L~~l~~~G~-ir~iGvS~~----~~~~l~~~~~~-- 175 (273)
.+.+..+++...+.- ...-|+ +...+... .....++.++.|++.|. |..||+-.| .++.+++.++.
T Consensus 150 ~~~i~~af~~Ar~~d--P~a~L~-~Ndyn~~~~~~~k~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~~~~~~~~l~~~a 226 (303)
T 1i1w_A 150 EDYIPIAFQTARAAD--PNAKLY-INDYNLDSASYPKTQAIVNRVKKWRAAGVPIDGIGSQTHLSAGQGASVLQALPLLA 226 (303)
T ss_dssp TTHHHHHHHHHHHHC--TTSEEE-EEESSCCCSSSHHHHHHHHHHHHHHHTTCCCCEEEECCEECTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHC--CCCeEE-eccccccCCChHHHHHHHHHHHHHHHCCCcccEEEeccccCCCCHHHHHHHHHHHH
Confidence 456777777665542 112222 22221111 13456777888999998 999999442 34555554433
Q ss_pred -CCc-eEEeeeccccccccc--ccHHHHHHHhC--CeEEecccC
Q 024050 176 -HPI-TAVQMEWSLWTRDIE--EEIIPLCRELG--IGIVPYSPL 213 (273)
Q Consensus 176 -~~~-~~~q~~~~l~~~~~~--~~l~~~~~~~g--i~v~a~spl 213 (273)
... .+.-.++-+-....+ ..+++.|.++. ++|+-|+.-
T Consensus 227 ~~G~~pi~iTEldi~~~qa~~y~~~~~~~~~~~~v~git~Wg~~ 270 (303)
T 1i1w_A 227 SAGTPEVAITELDVAGASSTDYVNVVNACLNVSSCVGITVWGVA 270 (303)
T ss_dssp TTCCSEEEEEEEEETTCCHHHHHHHHHHHHHCTTEEEEEESCSB
T ss_pred HCCCCeEEEEeCCccchHHHHHHHHHHHHHhCCCceEEEEEcCC
Confidence 122 222233333322222 67889998875 677777644
No 276
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=22.95 E-value=1e+02 Score=25.60 Aligned_cols=65 Identities=12% Similarity=0.143 Sum_probs=40.0
Q ss_pred HHHHHcCCccEEecCCCCHHHHHHHhhcCC-ceEEeee---------------c-------ccccccccccHHHHHHHhC
Q 024050 148 KKLVEEGKIKYIGLSEASPGTIRRAHAVHP-ITAVQME---------------W-------SLWTRDIEEEIIPLCRELG 204 (273)
Q Consensus 148 ~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~-~~~~q~~---------------~-------~l~~~~~~~~l~~~~~~~g 204 (273)
+.+++.|..+.+=++.|+.+.+.++.+..| +.+..+- | ++-......++++.|+++|
T Consensus 149 ~~l~~~~~~~~vii~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~V~~ah~~G 228 (292)
T 3mz2_A 149 QLITDMQAEPYVMITVHDGASARFFYEKNPNFMFEAFVKTKEAVQDYEDNGIPWSHIMAYVGPKITPEVREVIDMLHERG 228 (292)
T ss_dssp HHHHHTTCTTTEEEEESSHHHHHHHHHHCTTCCEEEECCSHHHHHHHHHTTCCGGGEEEEEESSCCHHHHHHHHHHHHTT
T ss_pred HHHHHcCCCCCEEEEECCHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHhCCChhheeeeecccccccCHHHHHHHHHCC
Confidence 344556777778888899888887766532 1111110 0 1001111267999999999
Q ss_pred CeEEeccc
Q 024050 205 IGIVPYSP 212 (273)
Q Consensus 205 i~v~a~sp 212 (273)
+.|.+|.+
T Consensus 229 ~~V~vWTv 236 (292)
T 3mz2_A 229 VMCMISTA 236 (292)
T ss_dssp BCEEEECT
T ss_pred CEEEEEeC
Confidence 99999854
No 277
>2lju_A Putative oxidoreductase; structural genomics, seattle structural GENO center for infectious disease, ssgcid; NMR {Ehrlichia chaffeensis}
Probab=22.78 E-value=44 Score=23.59 Aligned_cols=21 Identities=14% Similarity=-0.056 Sum_probs=19.0
Q ss_pred ccHHHHHHHhCCeEEecccCC
Q 024050 194 EEIIPLCRELGIGIVPYSPLG 214 (273)
Q Consensus 194 ~~l~~~~~~~gi~v~a~spl~ 214 (273)
++.+.+|+++|+.+....|-.
T Consensus 70 E~AiayAek~G~~y~V~ep~~ 90 (108)
T 2lju_A 70 ELAIAYAVAHKIDYTVLQDNP 90 (108)
T ss_dssp HHHHHHHHHTTCEEEEECSSC
T ss_pred HHHHHHHHHcCCEEEEecCCc
Confidence 779999999999999998865
No 278
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=22.73 E-value=1.5e+02 Score=19.99 Aligned_cols=57 Identities=7% Similarity=-0.018 Sum_probs=30.6
Q ss_pred CcccEEEecCCCCCCCHHHHHHHHHHHHHcC---CccEEecCCCCHHHHHHHhhcCCceEEee
Q 024050 124 DYIDLYYQHRVDTSVPIEETIGEMKKLVEEG---KIKYIGLSEASPGTIRRAHAVHPITAVQM 183 (273)
Q Consensus 124 d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G---~ir~iGvS~~~~~~l~~~~~~~~~~~~q~ 183 (273)
...|++++...-+... .++.+.++++.. .+.-+-++..+.+.+.++.+..-..++.-
T Consensus 49 ~~~dlii~d~~l~~~~---g~~~~~~l~~~~~~~~~~ii~~~~~~~~~~~~~~~~g~~~~l~k 108 (132)
T 3lte_A 49 FEPAIMTLDLSMPKLD---GLDVIRSLRQNKVANQPKILVVSGLDKAKLQQAVTEGADDYLEK 108 (132)
T ss_dssp TCCSEEEEESCBTTBC---HHHHHHHHHTTTCSSCCEEEEECCSCSHHHHHHHHHTCCEEECS
T ss_pred cCCCEEEEecCCCCCC---HHHHHHHHHhcCccCCCeEEEEeCCChHHHHHHHHhChHHHhhC
Confidence 3578888865543332 345555666544 34445555555555556665554444443
No 279
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=22.54 E-value=2e+02 Score=19.91 Aligned_cols=62 Identities=13% Similarity=0.167 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcCCceEEeeecccccccccccHHHHHHHhCCeEEec
Q 024050 142 ETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIEEEIIPLCRELGIGIVPY 210 (273)
Q Consensus 142 ~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~ 210 (273)
.+.+.|....+.|++. . ...+..++++......+-+--+. ..+....+..+|.+++|+++.+
T Consensus 8 ~i~~~L~la~kagkl~-~-----G~~~v~kai~~gka~lViiA~D~-~~~~~~~l~~~c~~~~Vp~~~~ 69 (110)
T 3cpq_A 8 DVNKAIRTAVDTGKVI-L-----GSKRTIKFVKHGEGKLVVLAGNI-PKDLEEDVKYYAKLSNIPVYQH 69 (110)
T ss_dssp HHHHHHHHHHHHSEEE-E-----SHHHHHHHHHTTCCSEEEECTTC-BHHHHHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHHcCCee-e-----CHHHHHHHHHcCCceEEEEeCCC-CHHHHHHHHHHHHHcCCCEEEE
Confidence 5667777778888864 2 34556666665443333332222 2222266888999999998776
No 280
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=22.07 E-value=5e+02 Score=24.41 Aligned_cols=95 Identities=14% Similarity=0.053 Sum_probs=49.7
Q ss_pred CCEEEEeccCcCCCC-CccccccCC-HHHHHHHHHHHHHHcCCCcccEEEec---CCCC-----CCCHHHHHHHHHHHHH
Q 024050 83 EKIQVATKFGIAGIG-VAGVIVKGA-PDYVRSCCEASLKRLDVDYIDLYYQH---RVDT-----SVPIEETIGEMKKLVE 152 (273)
Q Consensus 83 ~~~~i~tK~~~~~~~-~~~~~~~~~-~~~i~~~~~~sL~~L~~d~iDl~~lh---~~~~-----~~~~~~~~~~L~~l~~ 152 (273)
+++-|..|+.+...- .+. .+ .+...+ +-+.|+. ++|.+++-..| +... ..+....++...++++
T Consensus 215 ~~~pv~vrls~~~~~~~~G----~~~~~~~~~-~~~~l~~-~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 288 (729)
T 1o94_A 215 SDCAIATRFGVDTVYGPGQ----IEAEVDGQK-FVEMADS-LVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQ 288 (729)
T ss_dssp TTSEEEEEEEEECSSCTTS----CCTTTHHHH-HHHHHGG-GCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHT
T ss_pred CCceEEEEEccccCcCCCC----CCchHHHHH-HHHHHHh-hcCEEEEeeecccccccccCCccccCccccHHHHHHHHH
Confidence 366788888764321 011 22 222333 4455666 46777776654 1110 0111112455556666
Q ss_pred cCCccEEecCCC-CHHHHHHHhhcCCceEEee
Q 024050 153 EGKIKYIGLSEA-SPGTIRRAHAVHPITAVQM 183 (273)
Q Consensus 153 ~G~ir~iGvS~~-~~~~l~~~~~~~~~~~~q~ 183 (273)
.=.+--|++..+ +++..+++++....+.+++
T Consensus 289 ~~~~pvi~~G~i~~~~~a~~~l~~g~aD~V~~ 320 (729)
T 1o94_A 289 VSKKPVLGVGRYTDPEKMIEIVTKGYADIIGC 320 (729)
T ss_dssp TCSSCEECCSCCCCHHHHHHHHHTTSCSBEEE
T ss_pred HCCCEEEEeCCCCCHHHHHHHHHCCCCCEEEe
Confidence 656666777665 5777777777655555554
No 281
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=22.01 E-value=3.5e+02 Score=22.68 Aligned_cols=87 Identities=15% Similarity=0.112 Sum_probs=55.0
Q ss_pred HcCCCcccEEEec-CCCCC-----CCHHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcCCceEEeeeccccccccc
Q 024050 120 RLDVDYIDLYYQH-RVDTS-----VPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITAVQMEWSLWTRDIE 193 (273)
Q Consensus 120 ~L~~d~iDl~~lh-~~~~~-----~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~~q~~~~l~~~~~~ 193 (273)
.-|-|.||+---- +|... +.+..+...++.+++.-.+ -|.|-++.++.++++++.....+ +..|-...+
T Consensus 44 ~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~~v-piSIDT~~~~Va~aAl~aGa~iI--NDVsg~~~d-- 118 (314)
T 2vef_A 44 AEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKESDV-LISIDTWKSQVAEAALAAGADLV--NDITGLMGD-- 118 (314)
T ss_dssp HTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHCCC-EEEEECSCHHHHHHHHHTTCCEE--EETTTTCSC--
T ss_pred HCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhCCc-eEEEeCCCHHHHHHHHHcCCCEE--EECCCCCCC--
Confidence 3577888887633 34321 1123345555666665222 47888999999999999865433 334444332
Q ss_pred ccHHHHHHHhCCeEEecc
Q 024050 194 EEIIPLCRELGIGIVPYS 211 (273)
Q Consensus 194 ~~l~~~~~~~gi~v~a~s 211 (273)
.++++.++++|..++.+.
T Consensus 119 ~~m~~v~a~~~~~vvlmh 136 (314)
T 2vef_A 119 EKMPHVVAEARAQVVIMF 136 (314)
T ss_dssp TTHHHHHHHHTCEEEEEC
T ss_pred hHHHHHHHHcCCCEEEEe
Confidence 579999999999999874
No 282
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=21.99 E-value=1.7e+02 Score=24.53 Aligned_cols=98 Identities=16% Similarity=0.148 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHHHcCCCcccEEEec-CCCCC-CCHH----HHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhcCCceE
Q 024050 107 PDYVRSCCEASLKRLDVDYIDLYYQH-RVDTS-VPIE----ETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAVHPITA 180 (273)
Q Consensus 107 ~~~i~~~~~~sL~~L~~d~iDl~~lh-~~~~~-~~~~----~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~~~~~~ 180 (273)
.+.+.+..++ +..-|-|.||+---- +|... .+.+ .+...++.+++.+. -|.|-+++++.++++++.....+
T Consensus 45 ~~~a~~~a~~-~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~~v--piSIDT~~~~Va~aAl~aGa~iI 121 (294)
T 2y5s_A 45 RDDALRRAER-MIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPLNV--PLSIDTYKPAVMRAALAAGADLI 121 (294)
T ss_dssp TTHHHHHHHH-HHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGGCS--CEEEECCCHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHH-HHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhCCC--eEEEECCCHHHHHHHHHcCCCEE
Confidence 3444444433 334578888887633 34321 2223 34555566655533 37888999999999999865433
Q ss_pred EeeecccccccccccHHHHHHHhCCeEEeccc
Q 024050 181 VQMEWSLWTRDIEEEIIPLCRELGIGIVPYSP 212 (273)
Q Consensus 181 ~q~~~~l~~~~~~~~l~~~~~~~gi~v~a~sp 212 (273)
+..|... ..++++.++++|..++.+..
T Consensus 122 --NdVsg~~---d~~m~~~~a~~~~~vVlmh~ 148 (294)
T 2y5s_A 122 --NDIWGFR---QPGAIDAVRDGNSGLCAMHM 148 (294)
T ss_dssp --EETTTTC---STTHHHHHSSSSCEEEEECC
T ss_pred --EECCCCC---chHHHHHHHHhCCCEEEECC
Confidence 3334443 25799999999999999864
No 283
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=21.94 E-value=4.2e+02 Score=23.45 Aligned_cols=144 Identities=15% Similarity=0.099 Sum_probs=69.8
Q ss_pred CHHHHHHHHHHHHHCCCCccccccCCCCCcHHHHHHHHHhc-CCC-CCEEEEeccCcCCCCCccccccCCHHHHHHHHHH
Q 024050 39 SEEDGISMIKHAFSKGITFFDTADVYGQNANEVLLGKALKQ-LPR-EKIQVATKFGIAGIGVAGVIVKGAPDYVRSCCEA 116 (273)
Q Consensus 39 ~~~~~~~~l~~A~~~Gin~~DtA~~Yg~g~se~~lg~~l~~-~~r-~~~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~ 116 (273)
...+..+.+..+++.|.++-- +...|..+.+.|.+ .+. +.++. +..+ .+..+.+++-
T Consensus 104 ~hp~v~~Av~~q~~~~~~~~~------~~~~~~~lae~l~~~~p~~~~v~f-~~SG--------------sEA~e~Aikl 162 (454)
T 4ao9_A 104 SAPEIRDAVIEAMQGGINLTG------HNLLEGRLARLICERFPQIEQLRF-TNSG--------------TEANLMALTA 162 (454)
T ss_dssp CCHHHHHHHHHHHHTCSCCCS------EESSHHHHHHHHHHHSTTCSEEEE-ESSH--------------HHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhcCCCccC------CcHHHHHHHHHHHHhCCCCCEEEE-eCch--------------HHHHHHHHHH
Confidence 467788888889998876421 11244556666654 333 33333 2221 4556667766
Q ss_pred HHHHcCCCcccEEEe----cCCCCCCC-HHHHHHHHHHHHHcC-CccEEecCCCCHHHHHHHhhcC--CceE-----Eee
Q 024050 117 SLKRLDVDYIDLYYQ----HRVDTSVP-IEETIGEMKKLVEEG-KIKYIGLSEASPGTIRRAHAVH--PITA-----VQM 183 (273)
Q Consensus 117 sL~~L~~d~iDl~~l----h~~~~~~~-~~~~~~~L~~l~~~G-~ir~iGvS~~~~~~l~~~~~~~--~~~~-----~q~ 183 (273)
.+..-|.+. ++.+ |....... ... ..+ ....+-+.-.+.+.++++++.. .+.. +|.
T Consensus 163 Ar~~tgr~~--ii~~~~~yHG~t~~~~~~~~---------~~~~~~~~~~~p~nd~~~l~~~l~~~~~~iAavIvEPv~g 231 (454)
T 4ao9_A 163 ALHFTGRRK--IVVFSGGYHGGVLGFGARPS---------PTTVPFDFLVLPYNDAQTARAQIERHGPEIAVVLVEPMQG 231 (454)
T ss_dssp HHHHHTCCE--EEEETTCBCSTTCBBSSSBC---------TTSCCSEEEEECTTCHHHHHHHHHHTGGGEEEEEECSEES
T ss_pred HHhcccCCe--EEEEeCCcCCcccccccccc---------CccCCCCcccCCCchHHHHHHHHhhcCCceEEEEeccccC
Confidence 665555443 3333 32211000 000 000 0011112223455566555432 2222 333
Q ss_pred ecccccccc--cccHHHHHHHhCCeEEecccCC
Q 024050 184 EWSLWTRDI--EEEIIPLCRELGIGIVPYSPLG 214 (273)
Q Consensus 184 ~~~l~~~~~--~~~l~~~~~~~gi~v~a~spl~ 214 (273)
.-....+.. -+++.+.|+++|+-+|.=....
T Consensus 232 ~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~t 264 (454)
T 4ao9_A 232 ASGCIPGQPDFLQALRESATQVGALLVFDEVMT 264 (454)
T ss_dssp TTTCEECCHHHHHHHHHHHHHHTCEEEEECTTG
T ss_pred CCCccCCchhhHHHHHHHHhhcCCEEEEECCCc
Confidence 332332222 2778899999999988766655
No 284
>1wdd_S Ribulose bisphosphate carboxylase small chain C; rubisco, photosynthesis, alpha/beta barrel, N-methylmethioni translational modification, lyase; HET: KCX CAP; 1.35A {Oryza sativa} SCOP: d.73.1.1 PDB: 3axm_S* 3axk_S* 8ruc_I* 1aus_S 1rbo_S* 1rco_S* 1rcx_S* 1rxo_S* 1upm_C* 1upp_I* 1aa1_S* 3rub_S 1rlc_S* 1rld_S 1ej7_S 1ir1_S* 4rub_S*
Probab=21.92 E-value=2.3e+02 Score=20.51 Aligned_cols=89 Identities=15% Similarity=0.115 Sum_probs=54.6
Q ss_pred eccccCCCCCCCCCCHHHHHHHHHHHHHCCCC----ccccccCCCCCcHHHHHHHHHhcCCCCCEEEEeccCcCCCCCcc
Q 024050 25 YGCMNLSGGYSSPVSEEDGISMIKHAFSKGIT----FFDTADVYGQNANEVLLGKALKQLPREKIQVATKFGIAGIGVAG 100 (273)
Q Consensus 25 lG~~~~~~~~~~~~~~~~~~~~l~~A~~~Gin----~~DtA~~Yg~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~~~~ 100 (273)
|||.++ =.++++++..+.|++++..|.. |-|....|-.+ -. -........+-.-|++...
T Consensus 12 ~~tfSy----LP~lt~eqI~kQI~Yll~qGw~p~lEf~d~~~~~R~~--~~-----~~~~~~~~yW~mWkLPmFg----- 75 (128)
T 1wdd_S 12 FETLSY----LPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYREN--HR-----SPGYYDGRYWTMWKLPMFG----- 75 (128)
T ss_dssp CSTTTT----SSCCCHHHHHHHHHHHHHTTCEEEEEEESCCSCBCSS--CC-----STTCCBSCCCEEESCCCTT-----
T ss_pred cccccc----CCCCCHHHHHHHHHHHHHCCCeeeEEecCCCceeecc--CC-----CCCcccCCcccccCccCcc-----
Confidence 566553 3356899999999999999975 22322222210 00 0002233566666654332
Q ss_pred ccccCCHHHHHHHHHHHHHHcCCCcccEEEec
Q 024050 101 VIVKGAPDYVRSCCEASLKRLDVDYIDLYYQH 132 (273)
Q Consensus 101 ~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh 132 (273)
.-++..+...|++.++.---.||-|+-+.
T Consensus 76 ---~td~~~Vl~El~~C~k~~P~~YVRligfD 104 (128)
T 1wdd_S 76 ---CTDATQVLKELEEAKKAYPDAFVRIIGFD 104 (128)
T ss_dssp ---CCCHHHHHHHHHHHHHHCTTSEEEEEEEE
T ss_pred ---CCCHHHHHHHHHHHHHHCCCCeEEEEEEe
Confidence 34688999999999998877777775443
No 285
>3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A*
Probab=21.72 E-value=1.8e+02 Score=24.74 Aligned_cols=106 Identities=20% Similarity=0.317 Sum_probs=58.2
Q ss_pred CHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCC--HHHHHHHHHHHHHcCC-ccEEecCCC------CHHHHHHHhhc-
Q 024050 106 APDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVP--IEETIGEMKKLVEEGK-IKYIGLSEA------SPGTIRRAHAV- 175 (273)
Q Consensus 106 ~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~--~~~~~~~L~~l~~~G~-ir~iGvS~~------~~~~l~~~~~~- 175 (273)
..+.|..+++...+. . ...-|| +-......+ ....++-++.|+++|. |..||+=.| +++.+++.++.
T Consensus 153 G~~~i~~aF~~Ar~a-d-P~a~L~-~NDyn~~~~~k~~~~~~~v~~l~~~GvpidgiG~Q~H~~~~~p~~~~~~~~l~~~ 229 (331)
T 3emz_A 153 GEDYLVQAFNMAHEA-D-PNALLF-YNDYNETDPVKREKIYNLVRSLLDQGAPVHGIGMQGHWNIHGPSMDEIRQAIERY 229 (331)
T ss_dssp CTTHHHHHHHHHHHH-C-TTSEEE-EEESSCSSHHHHHHHHHHHHHHHHHTCCCCEEEECCEEETTBSCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhh-C-CCceEE-eccccccChHHHHHHHHHHHHHHHCCCccceEEECceecCCCCCHHHHHHHHHHH
Confidence 356777777777665 1 122222 222222211 2356788899999997 999997543 45566655544
Q ss_pred ----CCceEEeeeccccc-----------------ccc--cccHHHHHHHh--CC-eEEecccCC
Q 024050 176 ----HPITAVQMEWSLWT-----------------RDI--EEEIIPLCREL--GI-GIVPYSPLG 214 (273)
Q Consensus 176 ----~~~~~~q~~~~l~~-----------------~~~--~~~l~~~~~~~--gi-~v~a~spl~ 214 (273)
.++.+-.+..+... .+. -..+++.|.++ .| +|..|+.-.
T Consensus 230 a~lGl~v~iTElDi~~~~~~~~~~~~~~~t~~~~~~Qa~~y~~~~~~~~~~~~~v~giT~WG~~D 294 (331)
T 3emz_A 230 ASLDVQLHVTELDLSVFRHEDQRTDLTEPTAEMAELQQKRYEDIFGLFREYRSNITSVTFWGVAD 294 (331)
T ss_dssp HTTSCEEEEEEEEEESSCTTCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTTTEEEEEESSSST
T ss_pred HHcCCcEEEeecccCCccccccccccCCCCHHHHHHHHHHHHHHHHHHHhcCCCeeEEEEECCCC
Confidence 23333333333220 011 16688999986 34 677775544
No 286
>2h9a_A Carbon monoxide dehydrogenase corrinoid/iron- sulfur protein, gamma subunit; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_A*
Probab=21.36 E-value=4.3e+02 Score=23.44 Aligned_cols=77 Identities=9% Similarity=0.043 Sum_probs=45.3
Q ss_pred ccEEEecCCCCCCCHHHHHHHHHHHHHc-CCccEEecCCCCHHHHHHHhhcC---CceEEeeecccccccccccHHHHHH
Q 024050 126 IDLYYQHRVDTSVPIEETIGEMKKLVEE-GKIKYIGLSEASPGTIRRAHAVH---PITAVQMEWSLWTRDIEEEIIPLCR 201 (273)
Q Consensus 126 iDl~~lh~~~~~~~~~~~~~~L~~l~~~-G~ir~iGvS~~~~~~l~~~~~~~---~~~~~q~~~~l~~~~~~~~l~~~~~ 201 (273)
+|++-|+.- ..+.+.....++.+++. +.--.|. ++++.++++++.. ++-++-+.-. +. +++.+.++
T Consensus 128 aD~I~l~~~--~~dpe~~~~~Vk~V~e~~dvPlsID---~dp~vleaale~~~d~~pLIns~t~e----n~-~~~~~la~ 197 (445)
T 2h9a_A 128 VNLVALKGS--SQDAATFAKAVATAREVTDLPFILI---GTPEQLAAALETEGANNPLLYAATAD----NY-EQMVELAK 197 (445)
T ss_dssp CCEEEEECT--TCCHHHHHHHHHHHHHHCCSCEEEE---SCHHHHHHHHHHHGGGCCEEEEECTT----TH-HHHHHHHH
T ss_pred CcEEEEeCC--CCCHHHHHHHHHHHHHhcCCCEEEE---CCHHHHHHHHHhcCCCCCEEEECCHH----HH-HHHHHHHH
Confidence 566666662 23445555555555554 5444444 8899999888662 2323222211 22 67888888
Q ss_pred HhCCeEEeccc
Q 024050 202 ELGIGIVPYSP 212 (273)
Q Consensus 202 ~~gi~v~a~sp 212 (273)
++|..+++.++
T Consensus 198 ~y~~~vV~~~~ 208 (445)
T 2h9a_A 198 KYNVPLTVSAK 208 (445)
T ss_dssp HHTCCEEEECS
T ss_pred HhCCeEEEEcC
Confidence 88888888553
No 287
>2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A
Probab=21.31 E-value=1.3e+02 Score=26.52 Aligned_cols=105 Identities=9% Similarity=0.140 Sum_probs=57.9
Q ss_pred CHHHHHHHHHHHHHHcCCCcccEEEecCCCCCC----CHHHHHHHHHHHHHcCC-ccEEecCCC------CHHHHHHHhh
Q 024050 106 APDYVRSCCEASLKRLDVDYIDLYYQHRVDTSV----PIEETIGEMKKLVEEGK-IKYIGLSEA------SPGTIRRAHA 174 (273)
Q Consensus 106 ~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~----~~~~~~~~L~~l~~~G~-ir~iGvS~~------~~~~l~~~~~ 174 (273)
..+.+..+++...+.- ...- +++....... .....++.++.|++.|. |..||+..| +++.+++.++
T Consensus 147 g~~~i~~af~~Ar~~d--P~a~-l~~Ndyn~~~~~~~k~~~~~~~v~~l~~~g~~iDgiG~q~H~~~~~~~~~~~~~~l~ 223 (436)
T 2d1z_A 147 GNDWIEVAFRTARAAD--PAAK-LCYNDYNIENWTWAKTQGVYNMVRDFKQRGVPIDCVGFQSHFNSGSPYNSNFRTTLQ 223 (436)
T ss_dssp CTTHHHHHHHHHHHHC--TTSE-EEEEESSCCSTTSHHHHHHHHHHHHHHHHTCCCCEEEECCEEBTTBCCCTTHHHHHH
T ss_pred chHHHHHHHHHHHhhC--CCCE-EEEeccccccCChhHHHHHHHHHHHHHhCCCcccEEEEeeEEcCCCCCHHHHHHHHH
Confidence 3567888877777642 1222 3344332221 12355677788999987 999999654 2334444333
Q ss_pred c---CCceEEeeeccccccccc--ccHHHHHHHhC--CeEEecccC
Q 024050 175 V---HPITAVQMEWSLWTRDIE--EEIIPLCRELG--IGIVPYSPL 213 (273)
Q Consensus 175 ~---~~~~~~q~~~~l~~~~~~--~~l~~~~~~~g--i~v~a~spl 213 (273)
. ....+.-.++.+-..+.+ ..+++.|.++. ++|+.|.+-
T Consensus 224 ~~a~~g~~v~iTEldv~~~qa~~y~~~~~~~~~~~~~~gvt~Wg~~ 269 (436)
T 2d1z_A 224 NFAALGVDVAITELDIQGASSSTYAAVTNDCLAVSRCLGITVWGVR 269 (436)
T ss_dssp HHHTTTCEEEEEEEEETTCCHHHHHHHHHHHHTCTTEEEEEESCSB
T ss_pred HHHHcCCeEEEeecchhHHHHHHHHHHHHHHHhcCCceEEEecccc
Confidence 2 222233333333222222 67888888875 667777543
No 288
>3ose_A Serine/threonine-protein kinase MARK1; kinase associated-1(Ka1) domain, transferase, lipid binding membrane association; 1.70A {Homo sapiens} SCOP: d.129.6.1 PDB: 1ul7_A
Probab=21.17 E-value=78 Score=22.60 Aligned_cols=23 Identities=17% Similarity=0.159 Sum_probs=19.9
Q ss_pred cCCHHHHHHHHHHHHHHcCCCcc
Q 024050 104 KGAPDYVRSCCEASLKRLDVDYI 126 (273)
Q Consensus 104 ~~~~~~i~~~~~~sL~~L~~d~i 126 (273)
..+|+.|...|.+.|..+|++|-
T Consensus 36 ~~~P~eIm~eI~rvL~~~gi~~~ 58 (120)
T 3ose_A 36 SMDPNDMMREIRKVLDANNCDYE 58 (120)
T ss_dssp CSCHHHHHHHHHHHHHHTTCEEE
T ss_pred cCCHHHHHHHHHHHHHHCCCEEE
Confidence 45699999999999999998654
No 289
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=21.15 E-value=1.6e+02 Score=24.48 Aligned_cols=57 Identities=12% Similarity=0.222 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHcCCCcccEEEecCCCC-CCC---------------------H------HHHHHHHHHHHHcCCccE
Q 024050 107 PDYVRSCCEASLKRLDVDYIDLYYQHRVDT-SVP---------------------I------EETIGEMKKLVEEGKIKY 158 (273)
Q Consensus 107 ~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~-~~~---------------------~------~~~~~~L~~l~~~G~ir~ 158 (273)
++...+...+.+++||.+.++.+-+..... ..+ + ..+.+.|.+.+++|++-+
T Consensus 69 ~~~~~~~~~~~f~~lG~~~v~~L~i~~r~~a~~~~~~~~l~~ad~I~v~GGnt~~l~~~l~~t~l~~~L~~~~~~G~~~~ 148 (291)
T 3en0_A 69 PLLIGERYQTIFSDMGVKELKVLDIRDRAQGDDSGYRLFVEQCTGIFMTGGDQLRLCGLLADTPLMDRIRQRVHNGEISL 148 (291)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEECCCCSGGGGGCHHHHHHHHHCSEEEECCSCHHHHHHHHTTCHHHHHHHHHHHTTSSEE
T ss_pred hHHHHHHHHHHHHHcCCCeeEEEEecCccccCCHHHHHHHhcCCEEEECCCCHHHHHHHHHhCCHHHHHHHHHHCCCeEE
Confidence 556667778899999987777766643211 000 1 135688999999997778
Q ss_pred EecCC
Q 024050 159 IGLSE 163 (273)
Q Consensus 159 iGvS~ 163 (273)
+|.|-
T Consensus 149 ~GtSA 153 (291)
T 3en0_A 149 AGTSA 153 (291)
T ss_dssp EEETH
T ss_pred EEeCH
Confidence 99983
No 290
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=21.09 E-value=1.7e+02 Score=24.91 Aligned_cols=77 Identities=12% Similarity=0.046 Sum_probs=0.0
Q ss_pred CCHHHHHHHHHHHHHCCCCccccccCCC-----------------------CCcHHHHHHHHHhcCCCCCEEEEeccCcC
Q 024050 38 VSEEDGISMIKHAFSKGITFFDTADVYG-----------------------QNANEVLLGKALKQLPREKIQVATKFGIA 94 (273)
Q Consensus 38 ~~~~~~~~~l~~A~~~Gin~~DtA~~Yg-----------------------~g~se~~lg~~l~~~~r~~~~i~tK~~~~ 94 (273)
++......++++|+++|.+++|++.... +|-+.-+....+++..-.++.+..-..+.
T Consensus 85 ~p~~~~~~v~~~~~~~g~~yvD~s~~~~~~~~l~~~a~~~g~~~i~~~G~~PG~~~~~a~~~~~~~~~~~~~~~~gg~p~ 164 (365)
T 3abi_A 85 LPGFLGFKSIKAAIKSKVDMVDVSFMPENPLELRDEAEKAQVTIVFDAGFAPGLSNILMGRIFQELDLKEGYIYVGGLPK 164 (365)
T ss_dssp CCGGGHHHHHHHHHHHTCEEEECCCCSSCGGGGHHHHHHTTCEEECCCBTTTBHHHHHHHHHHHHSCEEEEEEEEEEEES
T ss_pred cCCcccchHHHHHHhcCcceEeeeccchhhhhhhhhhccCCceeeecCCCCCchHHHHHHHHHHhccccceeEEecccCC
Q ss_pred CCCCc-cccccCCHHHHHHHH
Q 024050 95 GIGVA-GVIVKGAPDYVRSCC 114 (273)
Q Consensus 95 ~~~~~-~~~~~~~~~~i~~~~ 114 (273)
.+..+ .....+++..+.+.+
T Consensus 165 ~~~~~~~y~~~~s~~~~i~~~ 185 (365)
T 3abi_A 165 DPKPPLYYKITWSPRDLIEEY 185 (365)
T ss_dssp SCCTTTCCCCCSCHHHHHHHH
T ss_pred CCCCcchhceeechhhhHHhh
No 291
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=20.81 E-value=3.9e+02 Score=22.74 Aligned_cols=86 Identities=8% Similarity=0.101 Sum_probs=50.7
Q ss_pred cccEEEecCCCCCCCHHHHHHHHHHHHHcCCccEEecCCCCHHHHHHHhhc-----CCceEEeeeccccccc-ccccHHH
Q 024050 125 YIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPGTIRRAHAV-----HPITAVQMEWSLWTRD-IEEEIIP 198 (273)
Q Consensus 125 ~iDl~~lh~~~~~~~~~~~~~~L~~l~~~G~ir~iGvS~~~~~~l~~~~~~-----~~~~~~q~~~~l~~~~-~~~~l~~ 198 (273)
.=|.+++..+... .....+ ...| .+-+-+...+.+.++++++. ....++...+|+.-.. ...++.+
T Consensus 147 ~gd~vl~~~~~h~----~~~~~~---~~~g-~~~~~~~~~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~~l~~l~~ 218 (427)
T 2w8t_A 147 KGEYVILDADSHA----SIYDGC---QQGN-AEIVRFRHNSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAPLKEMVA 218 (427)
T ss_dssp TTCEEEEETTCCH----HHHHHH---HHSC-SEEEEECTTCHHHHHHHHHTSCSSSCEEEEEESEETTTTEECCHHHHHH
T ss_pred CCCEEEECCcccH----HHHHHH---HHcC-CeeEEeCCCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHHHHHH
Confidence 4477777766442 233332 2233 34455556688889888764 2334444445543221 1278999
Q ss_pred HHHHhCCeEEecccCCCccC
Q 024050 199 LCRELGIGIVPYSPLGRGFF 218 (273)
Q Consensus 199 ~~~~~gi~v~a~spl~~G~L 218 (273)
.|+++|+-++.=...+.|.+
T Consensus 219 l~~~~g~~li~Dea~~~~~~ 238 (427)
T 2w8t_A 219 VAKKHGAMVLVDEAHSMGFF 238 (427)
T ss_dssp HHHHTTCEEEEECTTTTTTS
T ss_pred HHHHcCCEEEEECCcccccc
Confidence 99999999997666665544
No 292
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=20.40 E-value=4e+02 Score=22.61 Aligned_cols=138 Identities=16% Similarity=0.087 Sum_probs=70.7
Q ss_pred CCCHHHHHHHHH-------HHHHCCCCccccc-------------------cCCCCCcHH---HHHHH---HHhcCCCCC
Q 024050 37 PVSEEDGISMIK-------HAFSKGITFFDTA-------------------DVYGQNANE---VLLGK---ALKQLPREK 84 (273)
Q Consensus 37 ~~~~~~~~~~l~-------~A~~~Gin~~DtA-------------------~~Yg~g~se---~~lg~---~l~~~~r~~ 84 (273)
.++.+|..++++ .|.++|+..++.- +.|| |.-| +++-+ ++++.-.++
T Consensus 132 ~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yG-GslenR~rf~~eiv~aVr~avg~d 210 (343)
T 3kru_A 132 ELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYG-NSIENRARFLIEVIDEVRKNWPEN 210 (343)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTS-SSHHHHTHHHHHHHHHHHHTSCTT
T ss_pred hcCHHHHHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhc-cchHhHHHHHHHHHHHHHhcCCcc
Confidence 356666666554 4567898877654 2344 2222 22222 333322346
Q ss_pred EEEEeccCcCCCCCccccccCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCC----CCHHHHHHHHHHHHHcCCccEEe
Q 024050 85 IQVATKFGIAGIGVAGVIVKGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTS----VPIEETIGEMKKLVEEGKIKYIG 160 (273)
Q Consensus 85 ~~i~tK~~~~~~~~~~~~~~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~----~~~~~~~~~L~~l~~~G~ir~iG 160 (273)
+-|..|+.+.....+ ..+.+...+ +-+.|+.. +|+|++- |..... ......++...++++.=.+--|+
T Consensus 211 ~pv~vRls~~~~~~~----g~~~~~~~~-~a~~l~~~-vd~i~vs--~g~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~ 282 (343)
T 3kru_A 211 KPIFVRVSADDYMEG----GINIDMMVE-YINMIKDK-VDLIDVS--SGGLLNVDINLYPGYQVKYAETIKKRCNIKTSA 282 (343)
T ss_dssp SCEEEEEECCCSSTT----SCCHHHHHH-HHHHHTTT-CSEEEEE--CCCSSCCCCCCCTTTTHHHHHHHHHHHTCEEEE
T ss_pred CCeEEEeechhhhcc----CccHHHHHH-HHHHhhcc-ccEEecc--CCceEeeeecccCceeehHHHHHHHhcCcccce
Confidence 667778876432111 123333333 33444555 6666553 221100 01111344445555544566677
Q ss_pred cCCC-CHHHHHHHhhcCCceEEee
Q 024050 161 LSEA-SPGTIRRAHAVHPITAVQM 183 (273)
Q Consensus 161 vS~~-~~~~l~~~~~~~~~~~~q~ 183 (273)
+... +++..+++++....+.+++
T Consensus 283 ~Ggi~t~e~Ae~~l~~G~aD~V~i 306 (343)
T 3kru_A 283 VGLITTQELAEEILSNERADLVAL 306 (343)
T ss_dssp ESSCCCHHHHHHHHHTTSCSEEEE
T ss_pred eeeeeHHHHHHHHHhchhhHHHHH
Confidence 7764 6888888888776676665
No 293
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=20.29 E-value=2.3e+02 Score=27.59 Aligned_cols=84 Identities=17% Similarity=0.066 Sum_probs=50.1
Q ss_pred CCcHHHHHHHHHhcCCCCCEEEEeccCcCCCC---CccccccC----CHHHHHHHHHHHHHHcCCCcccEEEecCCCCCC
Q 024050 66 QNANEVLLGKALKQLPREKIQVATKFGIAGIG---VAGVIVKG----APDYVRSCCEASLKRLDVDYIDLYYQHRVDTSV 138 (273)
Q Consensus 66 ~g~se~~lg~~l~~~~r~~~~i~tK~~~~~~~---~~~~~~~~----~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~ 138 (273)
.|+.|....+++++..+.+-+|.-|.+...++ .....+.. +...--+..+..|++.|+ +..+...
T Consensus 720 ~g~~f~~aA~~~~~~~~~KPVVa~kaGrsa~~~~~~~~~sHtGAlag~~~~ta~~~~aa~r~aGv--------i~v~~~~ 791 (829)
T 3pff_A 720 GGTEEYKICRGIKEGRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGV--------FVPRSFD 791 (829)
T ss_dssp SSSHHHHHHHHHHTTSCCSCEEEEEECSSTTC---------------CGGGSHHHHHHHHHHTTC--------BCCSSGG
T ss_pred CchHHHHHHHHHHhccCCCCEEEEEecCcCcccccccccccccccccCCcccHHHHHHHHHHcCC--------eEcCCHH
Confidence 36677777777764457778888898877653 11111111 011112367888999996 3333333
Q ss_pred CH-HHHHHHHHHHHHcCCcc
Q 024050 139 PI-EETIGEMKKLVEEGKIK 157 (273)
Q Consensus 139 ~~-~~~~~~L~~l~~~G~ir 157 (273)
.+ +-.-+.|++|+++|.|.
T Consensus 792 el~~~~~~~~~~l~~~~~~~ 811 (829)
T 3pff_A 792 ELGEIIQSVYEDLVANGVIV 811 (829)
T ss_dssp GHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHCCcEe
Confidence 33 33457788999999985
No 294
>3ix3_A Transcriptional activator protein LASR; quorum sensing receptor, triphenyl mimics, DNA- binding, quorum sensing; HET: OHN; 1.40A {Pseudomonas aeruginosa} PDB: 3ix4_A* 3ix8_A* 3jpu_A* 2uv0_E*
Probab=20.28 E-value=2.2e+02 Score=21.02 Aligned_cols=30 Identities=7% Similarity=-0.158 Sum_probs=25.4
Q ss_pred CCHHHHHHHHHHHHHHcCCCcccEEEecCC
Q 024050 105 GAPDYVRSCCEASLKRLDVDYIDLYYQHRV 134 (273)
Q Consensus 105 ~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~ 134 (273)
.+.+.+.+.+.+..+.+|.+++=+...+.+
T Consensus 14 ~s~~~l~~~l~~~~~~~Gf~~~~y~~~~~~ 43 (173)
T 3ix3_A 14 SGKLEWSAILQKMASDLGFSKILFGLLPKD 43 (173)
T ss_dssp CHHHHHHHHHHHHHHHTTCSEEEEEEECTT
T ss_pred CCHHHHHHHHHHHHHHCCCCeEEEEeecCC
Confidence 357889999999999999999887777655
No 295
>1gtz_A 3-dehydroquinate dehydratase; lyase, type II dehydroquinase, shikimate pathway, dodecameric quaternary structure; HET: DHK; 1.6A {Streptomyces coelicolor} SCOP: c.23.13.1 PDB: 2bt4_A* 1v1j_A* 2cjf_A* 1d0i_A 1gu0_A 1gu1_A*
Probab=20.10 E-value=2.1e+02 Score=21.55 Aligned_cols=81 Identities=11% Similarity=0.032 Sum_probs=56.2
Q ss_pred cCCHHHHHHHHHHHHHHcCCCcccEEEecCCCCCCCHHHHHHHHHHHHHc--CCccEEecCCCCHHHHHHHhhcCC-ceE
Q 024050 104 KGAPDYVRSCCEASLKRLDVDYIDLYYQHRVDTSVPIEETIGEMKKLVEE--GKIKYIGLSEASPGTIRRAHAVHP-ITA 180 (273)
Q Consensus 104 ~~~~~~i~~~~~~sL~~L~~d~iDl~~lh~~~~~~~~~~~~~~L~~l~~~--G~ir~iGvS~~~~~~l~~~~~~~~-~~~ 180 (273)
..+.+.|.+.+++.-+.+|+ .++.+|-. .-.+.++++.+...+ |.|-.=|--+++.-.|.+++.... ..+
T Consensus 30 ~~Tl~di~~~l~~~a~~~g~-~v~~~QSN------~EGeLId~Ih~a~~~~dgiIINpgA~THtSvAlrDAl~~v~~~P~ 102 (156)
T 1gtz_A 30 SDTLADVEALCVKAAAAHGG-TVDFRQSN------HEGELVDWIHEARLNHCGIVINPAAYSHTSVAILDALNTCDGLPV 102 (156)
T ss_dssp SCCHHHHHHHHHHHHHTTTC-CEEEEECS------CHHHHHHHHHHHHHHCSEEEEECTTHHHHCHHHHHHHHTSTTCCE
T ss_pred CCCHHHHHHHHHHHHHHcCC-EEEEEeeC------CHHHHHHHHHHhhhcCcEEEECchhhccccHHHHHHHHhcCCCCE
Confidence 45788999999999999996 47777732 246788888888653 223222333344456777777766 888
Q ss_pred Eeeeccccccc
Q 024050 181 VQMEWSLWTRD 191 (273)
Q Consensus 181 ~q~~~~l~~~~ 191 (273)
+.++.|-.+.+
T Consensus 103 VEVHiSNi~aR 113 (156)
T 1gtz_A 103 VEVHISNIHQR 113 (156)
T ss_dssp EEEESSCGGGS
T ss_pred EEEEecCcccc
Confidence 99988877654
Done!