BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024057
(273 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225435806|ref|XP_002285757.1| PREDICTED: uncharacterized protein LOC100265613 [Vitis vinifera]
Length = 288
Score = 335 bits (860), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 168/247 (68%), Positives = 193/247 (78%), Gaps = 21/247 (8%)
Query: 15 KTHFLFNLRASSS-----PSSWKKFTQSANFAAKNRHVCRNERPNVSCSAAAFAVQETLE 69
K HF+FN SSS P K S ++ P S +A V++ L+
Sbjct: 14 KPHFIFNFNHSSSCQFLTPLPTKLLINSKLLSS----------PRTSLRTSALTVEKPLD 63
Query: 70 KTRESVMASSAKEMMPKIDKSGRFCSPRAARELALLVVYAACLEGSDPIRLFEKRLNSRR 129
K S +EM+P+IDKSGRFCSPRAARELALL+ YAACLEGSDP+RLFE+R+N+RR
Sbjct: 64 K------PSEPREMLPRIDKSGRFCSPRAARELALLIAYAACLEGSDPVRLFERRMNARR 117
Query: 130 EPGYEFDKSSLLEYNHMSFGGPPVTTETVEEADELLRSDEEESAIEAEVLSAPPKLVYSK 189
EPGYEFDK SLLEYNHMSFGGPPVTTETVEEADELLR++E+ESAIEAEVLSAPPKLVY K
Sbjct: 118 EPGYEFDKDSLLEYNHMSFGGPPVTTETVEEADELLRNNEKESAIEAEVLSAPPKLVYGK 177
Query: 190 LLLRFTRKLLVAVVDKWDAHVHIIDKVVPPIWKDQPAGRILELSILHLAMSEITVVGTRH 249
L+LRFTRKLLVAVVDKW++HV +IDKV PP WK++PAGRILEL ILHLAMSEI V+GTRH
Sbjct: 178 LILRFTRKLLVAVVDKWNSHVLVIDKVAPPNWKNEPAGRILELCILHLAMSEIAVLGTRH 237
Query: 250 QIVINEA 256
QIVINEA
Sbjct: 238 QIVINEA 244
>gi|224073118|ref|XP_002303980.1| predicted protein [Populus trichocarpa]
gi|222841412|gb|EEE78959.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 155/174 (89%), Positives = 167/174 (95%)
Query: 83 MMPKIDKSGRFCSPRAARELALLVVYAACLEGSDPIRLFEKRLNSRREPGYEFDKSSLLE 142
MMPKIDKSGRFCSPRAARELALL++YAACLEGSDPIRLFEKR+N+RREPGYEFDK+SLLE
Sbjct: 1 MMPKIDKSGRFCSPRAARELALLIIYAACLEGSDPIRLFEKRMNARREPGYEFDKASLLE 60
Query: 143 YNHMSFGGPPVTTETVEEADELLRSDEEESAIEAEVLSAPPKLVYSKLLLRFTRKLLVAV 202
YNHMSFGGPPVTTETVEEADEL SDE+ESAIEAEVLSAPPKLVYSKLLLRFTRKLLVAV
Sbjct: 61 YNHMSFGGPPVTTETVEEADELQLSDEKESAIEAEVLSAPPKLVYSKLLLRFTRKLLVAV 120
Query: 203 VDKWDAHVHIIDKVVPPIWKDQPAGRILELSILHLAMSEITVVGTRHQIVINEA 256
VDKWD+HV +IDKV PP WK++PAGRILE ILH+AMSEITV+GTRHQIVINEA
Sbjct: 121 VDKWDSHVLVIDKVSPPNWKNEPAGRILEFCILHMAMSEITVLGTRHQIVINEA 174
>gi|255564810|ref|XP_002523399.1| RNA binding protein, putative [Ricinus communis]
gi|223537349|gb|EEF38978.1| RNA binding protein, putative [Ricinus communis]
Length = 309
Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 154/196 (78%), Positives = 173/196 (88%), Gaps = 6/196 (3%)
Query: 60 AAFAVQETLEKTRESVMASSAKEMMPKIDKSGRFCSPRAARELALLVVYAACLEGSDPIR 119
+AF V+++ E + + KEMMPKIDKSGRFCSPRAARELAL+++YAACLEGSDP+R
Sbjct: 84 SAFVVEKSAENS------TKDKEMMPKIDKSGRFCSPRAARELALMMIYAACLEGSDPVR 137
Query: 120 LFEKRLNSRREPGYEFDKSSLLEYNHMSFGGPPVTTETVEEADELLRSDEEESAIEAEVL 179
LFEKR+N+RRE GYEFDK+SLLEYNHMSFGGPPVTT+T+EEAD+LL SDE ESA+EAEVL
Sbjct: 138 LFEKRINARREAGYEFDKTSLLEYNHMSFGGPPVTTDTIEEADKLLSSDEIESALEAEVL 197
Query: 180 SAPPKLVYSKLLLRFTRKLLVAVVDKWDAHVHIIDKVVPPIWKDQPAGRILELSILHLAM 239
SAPPKLVYSKLLLRFTRKLL AVV+KWD+HV IIDKV PP WK QP GRILE ILHLAM
Sbjct: 198 SAPPKLVYSKLLLRFTRKLLAAVVEKWDSHVLIIDKVAPPNWKSQPGGRILEFCILHLAM 257
Query: 240 SEITVVGTRHQIVINE 255
SEI VVGTRHQIVINE
Sbjct: 258 SEIAVVGTRHQIVINE 273
>gi|297746508|emb|CBI16564.3| unnamed protein product [Vitis vinifera]
Length = 218
Score = 322 bits (826), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 149/174 (85%), Positives = 166/174 (95%)
Query: 83 MMPKIDKSGRFCSPRAARELALLVVYAACLEGSDPIRLFEKRLNSRREPGYEFDKSSLLE 142
M+P+IDKSGRFCSPRAARELALL+ YAACLEGSDP+RLFE+R+N+RREPGYEFDK SLLE
Sbjct: 1 MLPRIDKSGRFCSPRAARELALLIAYAACLEGSDPVRLFERRMNARREPGYEFDKDSLLE 60
Query: 143 YNHMSFGGPPVTTETVEEADELLRSDEEESAIEAEVLSAPPKLVYSKLLLRFTRKLLVAV 202
YNHMSFGGPPVTTETVEEADELLR++E+ESAIEAEVLSAPPKLVY KL+LRFTRKLLVAV
Sbjct: 61 YNHMSFGGPPVTTETVEEADELLRNNEKESAIEAEVLSAPPKLVYGKLILRFTRKLLVAV 120
Query: 203 VDKWDAHVHIIDKVVPPIWKDQPAGRILELSILHLAMSEITVVGTRHQIVINEA 256
VDKW++HV +IDKV PP WK++PAGRILEL ILHLAMSEI V+GTRHQIVINEA
Sbjct: 121 VDKWNSHVLVIDKVAPPNWKNEPAGRILELCILHLAMSEIAVLGTRHQIVINEA 174
>gi|449463840|ref|XP_004149639.1| PREDICTED: uncharacterized protein LOC101216754 [Cucumis sativus]
Length = 378
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 141/175 (80%), Positives = 161/175 (92%)
Query: 82 EMMPKIDKSGRFCSPRAARELALLVVYAACLEGSDPIRLFEKRLNSRREPGYEFDKSSLL 141
EM+PK+DKSG+FCSPRAARELAL +VYAACLEGSDP+RLFEKRLN+RRE GYEFDK+SL+
Sbjct: 166 EMIPKVDKSGKFCSPRAARELALSIVYAACLEGSDPVRLFEKRLNARRESGYEFDKTSLM 225
Query: 142 EYNHMSFGGPPVTTETVEEADELLRSDEEESAIEAEVLSAPPKLVYSKLLLRFTRKLLVA 201
EYNHMSFGGPPVT ET+EEADELLR DE +S IEAE+L+APPK+VYSKL+LRFTRKLLVA
Sbjct: 226 EYNHMSFGGPPVTVETIEEADELLRKDERDSTIEAEILAAPPKIVYSKLILRFTRKLLVA 285
Query: 202 VVDKWDAHVHIIDKVVPPIWKDQPAGRILELSILHLAMSEITVVGTRHQIVINEA 256
V D WD+ I+KV+PP WK++PAGRILEL ILHLAMSEITV+GTRHQIVINEA
Sbjct: 286 VGDGWDSRALKIEKVIPPTWKNKPAGRILELCILHLAMSEITVIGTRHQIVINEA 340
>gi|18416739|ref|NP_567745.1| antitermination NusB domain-containing protein [Arabidopsis
thaliana]
gi|15450968|gb|AAK96755.1| putative protein [Arabidopsis thaliana]
gi|30984514|gb|AAP42720.1| At4g26370 [Arabidopsis thaliana]
gi|332659789|gb|AEE85189.1| antitermination NusB domain-containing protein [Arabidopsis
thaliana]
Length = 301
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 141/173 (81%), Positives = 155/173 (89%)
Query: 84 MPKIDKSGRFCSPRAARELALLVVYAACLEGSDPIRLFEKRLNSRREPGYEFDKSSLLEY 143
MPKIDKSGR SPRAARELAL+++YAACLEGSDPIRLFEKR+N+RREPGYEFDKSSLLEY
Sbjct: 85 MPKIDKSGRLSSPRAARELALVILYAACLEGSDPIRLFEKRINARREPGYEFDKSSLLEY 144
Query: 144 NHMSFGGPPVTTETVEEADELLRSDEEESAIEAEVLSAPPKLVYSKLLLRFTRKLLVAVV 203
NHMSFGGPPV TET EE DEL+R DE+ES IEAEVLSAPPKLVYSKL+LRF +KLL AVV
Sbjct: 145 NHMSFGGPPVKTETKEEEDELVRHDEKESKIEAEVLSAPPKLVYSKLVLRFAKKLLAAVV 204
Query: 204 DKWDAHVHIIDKVVPPIWKDQPAGRILELSILHLAMSEITVVGTRHQIVINEA 256
DKWD+HV II+K+ PP WK PAGRILE SILHLAMSE+ V+ TRH IVINEA
Sbjct: 205 DKWDSHVVIIEKISPPDWKSAPAGRILEFSILHLAMSEVAVLETRHPIVINEA 257
>gi|388512429|gb|AFK44276.1| unknown [Lotus japonicus]
Length = 288
Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 135/200 (67%), Positives = 165/200 (82%), Gaps = 2/200 (1%)
Query: 57 CSAAAFAVQETLEKTRESVMASSAKEMMPKIDKSGRFCSPRAARELALLVVYAACLEGSD 116
CS A+ AV +++ S + +PK+DK+GRFCSPRAARELAL ++YA+CLEG D
Sbjct: 58 CSVASSAV--AVDRDEASGLGKPDTVGLPKVDKTGRFCSPRAARELALSIIYASCLEGLD 115
Query: 117 PIRLFEKRLNSRREPGYEFDKSSLLEYNHMSFGGPPVTTETVEEADELLRSDEEESAIEA 176
P+RLFEKRLN RRE GY+FD+ LLEYN MSF GPPVT ++ EEA+ELLR+ E+ES +EA
Sbjct: 116 PVRLFEKRLNERREAGYQFDQRKLLEYNPMSFAGPPVTVQSEEEANELLRNIEKESDLEA 175
Query: 177 EVLSAPPKLVYSKLLLRFTRKLLVAVVDKWDAHVHIIDKVVPPIWKDQPAGRILELSILH 236
E+LSAPPKLVY+KL+LRFTRKLLVAV D WD+HV +I+KVVPP WKD+PAG+ILELSILH
Sbjct: 176 EILSAPPKLVYNKLILRFTRKLLVAVRDSWDSHVLVINKVVPPTWKDEPAGKILELSILH 235
Query: 237 LAMSEITVVGTRHQIVINEA 256
LAMSE+T + T HQIVINEA
Sbjct: 236 LAMSEMTKLETIHQIVINEA 255
>gi|2982469|emb|CAA18233.1| putative protein [Arabidopsis thaliana]
gi|7269489|emb|CAB79492.1| putative protein [Arabidopsis thaliana]
Length = 286
Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 143/184 (77%), Positives = 161/184 (87%), Gaps = 1/184 (0%)
Query: 74 SVMASSAKEM-MPKIDKSGRFCSPRAARELALLVVYAACLEGSDPIRLFEKRLNSRREPG 132
++ A K++ MPKIDKSGR SPRAARELAL+++YAACLEGSDPIRLFEKR+N+RREPG
Sbjct: 59 TISAEEVKDVPMPKIDKSGRLSSPRAARELALVILYAACLEGSDPIRLFEKRINARREPG 118
Query: 133 YEFDKSSLLEYNHMSFGGPPVTTETVEEADELLRSDEEESAIEAEVLSAPPKLVYSKLLL 192
YEFDKSSLLEYNHMSFGGPPV TET EE DEL+R DE+ES IEAEVLSAPPKLVYSKL+L
Sbjct: 119 YEFDKSSLLEYNHMSFGGPPVKTETKEEEDELVRHDEKESKIEAEVLSAPPKLVYSKLVL 178
Query: 193 RFTRKLLVAVVDKWDAHVHIIDKVVPPIWKDQPAGRILELSILHLAMSEITVVGTRHQIV 252
RF +KLL AVVDKWD+HV II+K+ PP WK PAGRILE SILHLAMSE+ V+ TRH IV
Sbjct: 179 RFAKKLLAAVVDKWDSHVVIIEKISPPDWKSAPAGRILEFSILHLAMSEVAVLETRHPIV 238
Query: 253 INEA 256
INEA
Sbjct: 239 INEA 242
>gi|297799366|ref|XP_002867567.1| antitermination NusB domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313403|gb|EFH43826.1| antitermination NusB domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 300
Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 142/184 (77%), Positives = 161/184 (87%), Gaps = 1/184 (0%)
Query: 74 SVMASSAKEM-MPKIDKSGRFCSPRAARELALLVVYAACLEGSDPIRLFEKRLNSRREPG 132
++ A K++ MPKIDKSGR SPRAARELAL+++YAACLEGSDPIRLFEKR+N+RREPG
Sbjct: 73 TISAEEVKDVPMPKIDKSGRLSSPRAARELALVILYAACLEGSDPIRLFEKRINARREPG 132
Query: 133 YEFDKSSLLEYNHMSFGGPPVTTETVEEADELLRSDEEESAIEAEVLSAPPKLVYSKLLL 192
YEFDK+SLLEYNHMSFGGPPV TET EE DEL+R DE+ES IEAEVLSAPPKLVYSKL+L
Sbjct: 133 YEFDKTSLLEYNHMSFGGPPVKTETKEEEDELVRHDEKESKIEAEVLSAPPKLVYSKLVL 192
Query: 193 RFTRKLLVAVVDKWDAHVHIIDKVVPPIWKDQPAGRILELSILHLAMSEITVVGTRHQIV 252
RF +KLL AVVDKWD+HV II+K+ PP WK PAGRILE SILHLAMSE+ V+ TRH IV
Sbjct: 193 RFAKKLLAAVVDKWDSHVVIIEKISPPDWKSAPAGRILEFSILHLAMSEVAVLETRHPIV 252
Query: 253 INEA 256
INEA
Sbjct: 253 INEA 256
>gi|363807164|ref|NP_001242346.1| uncharacterized protein LOC100809333 [Glycine max]
gi|255636077|gb|ACU18383.1| unknown [Glycine max]
Length = 289
Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 140/225 (62%), Positives = 175/225 (77%), Gaps = 14/225 (6%)
Query: 34 FTQSANFAAKNRHVCRNERPNVSCSAAAFAVQE--TLEKTRESVMASSAKEMMPKIDKSG 91
F+Q+A F+ +N ++ S A A E L K + +++ +PKIDK+G
Sbjct: 41 FSQNAAFSLRN---------SLRTSTFALAQHEAPVLGKPDNN---NNSSPYLPKIDKTG 88
Query: 92 RFCSPRAARELALLVVYAACLEGSDPIRLFEKRLNSRREPGYEFDKSSLLEYNHMSFGGP 151
RFCSPRAARELAL ++YAACLEG DP+RLFEKR+N+RRE GY+F++ LLEYNHMSFGGP
Sbjct: 89 RFCSPRAARELALSIIYAACLEGMDPVRLFEKRMNARREAGYKFNEERLLEYNHMSFGGP 148
Query: 152 PVTTETVEEADELLRSDEEESAIEAEVLSAPPKLVYSKLLLRFTRKLLVAVVDKWDAHVH 211
PVT + EEA+ELLR EEESAIEAEVL+APPKLVY+KL+LRFT+KLLVAV D WD+HV
Sbjct: 149 PVTVGSDEEANELLRHIEEESAIEAEVLTAPPKLVYNKLILRFTKKLLVAVRDTWDSHVL 208
Query: 212 IIDKVVPPIWKDQPAGRILELSILHLAMSEITVVGTRHQIVINEA 256
+I+K+ P WK++PA +ILELSILHLAMSE+ V+ TRHQIVINEA
Sbjct: 209 VINKIAPQNWKNEPAAKILELSILHLAMSEMEVLETRHQIVINEA 253
>gi|356521614|ref|XP_003529449.1| PREDICTED: uncharacterized protein LOC100806548 [Glycine max]
Length = 288
Score = 259 bits (662), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 138/207 (66%), Positives = 168/207 (81%), Gaps = 6/207 (2%)
Query: 52 RPNVSCSAAAFAVQET--LEKTRESVMASSAKEMMPKIDKSGRFCSPRAARELALLVVYA 109
R ++ S A A ET L+K + S+ +PKIDK+GRFCSPRAARELAL ++YA
Sbjct: 50 RTSLRTSTFALAPHETPVLDKPDNN----SSSPSLPKIDKTGRFCSPRAARELALSIIYA 105
Query: 110 ACLEGSDPIRLFEKRLNSRREPGYEFDKSSLLEYNHMSFGGPPVTTETVEEADELLRSDE 169
ACLEG DP+RLFEKR+N+RRE GY+F++ LLEYNHMSFGG PVT + EEA+ELLR E
Sbjct: 106 ACLEGMDPVRLFEKRMNARREAGYKFNEEKLLEYNHMSFGGSPVTVGSDEEANELLRHIE 165
Query: 170 EESAIEAEVLSAPPKLVYSKLLLRFTRKLLVAVVDKWDAHVHIIDKVVPPIWKDQPAGRI 229
EESAIEAEVL+APPKLVY+ L+LRFT+KLLVAV D WD+HV +I+K+VP WK++PAG+I
Sbjct: 166 EESAIEAEVLTAPPKLVYNTLILRFTKKLLVAVRDTWDSHVLVINKIVPQNWKNEPAGKI 225
Query: 230 LELSILHLAMSEITVVGTRHQIVINEA 256
LELSILHLAMSE+ V+ TRHQIVINEA
Sbjct: 226 LELSILHLAMSEMEVLETRHQIVINEA 252
>gi|357475091|ref|XP_003607831.1| N utilization substance protein B-like protein [Medicago
truncatula]
gi|355508886|gb|AES90028.1| N utilization substance protein B-like protein [Medicago
truncatula]
Length = 264
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 126/202 (62%), Positives = 155/202 (76%), Gaps = 9/202 (4%)
Query: 55 VSCSAAAFAVQETLEKTRESVMASSAKEMMPKIDKSGRFCSPRAARELALLVVYAACLEG 114
+ CS + ++T S + ++ +PK+DK+GRFCSPRAARELAL
Sbjct: 56 LKCSLRGSTLALDKDETSVSEITDTSSISLPKLDKTGRFCSPRAARELALDWTR------ 109
Query: 115 SDPIRLFEKRLNSRREPGYEFDKSSLLEYNHMSFGGPPVTTETVEEADELLRSDEEESAI 174
RLFEKR+N RRE GYEF+K LLEYNHMSFGGPPV ET E+A+ELLR+ + ESAI
Sbjct: 110 ---FRLFEKRMNERREVGYEFNKEKLLEYNHMSFGGPPVIVETDEDANELLRNIQLESAI 166
Query: 175 EAEVLSAPPKLVYSKLLLRFTRKLLVAVVDKWDAHVHIIDKVVPPIWKDQPAGRILELSI 234
E EVL+APPKLVYS+L+LRFTRKLLVAV D+WD+HV +I+KV+PP W+++PAG+ILELSI
Sbjct: 167 EEEVLAAPPKLVYSRLILRFTRKLLVAVRDRWDSHVPVINKVIPPNWQEEPAGKILELSI 226
Query: 235 LHLAMSEITVVGTRHQIVINEA 256
LHLAMSEI V+ TRHQIVINEA
Sbjct: 227 LHLAMSEIAVLDTRHQIVINEA 248
>gi|194688732|gb|ACF78450.1| unknown [Zea mays]
gi|414872056|tpg|DAA50613.1| TPA: RNA binding protein [Zea mays]
Length = 284
Score = 243 bits (621), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 109/171 (63%), Positives = 141/171 (82%)
Query: 86 KIDKSGRFCSPRAARELALLVVYAACLEGSDPIRLFEKRLNSRREPGYEFDKSSLLEYNH 145
K+D+SGRFCSPRAARELAL++ YAACLEG+D +RLF++R+++RREPG+ FDK+ LL YNH
Sbjct: 73 KVDRSGRFCSPRAARELALMISYAACLEGTDVVRLFDRRISARREPGFVFDKACLLSYNH 132
Query: 146 MSFGGPPVTTETVEEADELLRSDEEESAIEAEVLSAPPKLVYSKLLLRFTRKLLVAVVDK 205
MSFGG P+ T EEA++L +E++SA EA+VLSAPPKLVY+ +LR +R+LLVAV
Sbjct: 133 MSFGGGPLEVGTEEEAEKLTSQNEKDSANEADVLSAPPKLVYNNFVLRLSRELLVAVASG 192
Query: 206 WDAHVHIIDKVVPPIWKDQPAGRILELSILHLAMSEITVVGTRHQIVINEA 256
WD HV IIDK++P WKD+P RILEL ILH+AM+E+T GT H++VINEA
Sbjct: 193 WDKHVEIIDKIIPQAWKDEPVARILELCILHIAMAEMTSKGTPHKVVINEA 243
>gi|125587334|gb|EAZ27998.1| hypothetical protein OsJ_11964 [Oryza sativa Japonica Group]
Length = 287
Score = 241 bits (614), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 108/171 (63%), Positives = 140/171 (81%)
Query: 86 KIDKSGRFCSPRAARELALLVVYAACLEGSDPIRLFEKRLNSRREPGYEFDKSSLLEYNH 145
K+D+SGRFCSPRAARELAL++ YAACLEG+D +RLF++R+++RREPGY FDK+ ++ YNH
Sbjct: 75 KVDRSGRFCSPRAARELALMISYAACLEGADVVRLFDRRISARREPGYVFDKACVVNYNH 134
Query: 146 MSFGGPPVTTETVEEADELLRSDEEESAIEAEVLSAPPKLVYSKLLLRFTRKLLVAVVDK 205
MSFGG P+ T EEA++L+ +E++SA EAEVLSAPPKLVY+ +LR R++LVAV
Sbjct: 135 MSFGGGPLEVGTGEEAEKLMSQNEKDSANEAEVLSAPPKLVYNNFVLRLAREILVAVASG 194
Query: 206 WDAHVHIIDKVVPPIWKDQPAGRILELSILHLAMSEITVVGTRHQIVINEA 256
WD HV II+K+ P WKD+P RILEL ILH+AM+E+T GT H+IVINEA
Sbjct: 195 WDKHVDIINKITPQNWKDEPVARILELCILHIAMAEMTSKGTPHKIVINEA 245
>gi|115454421|ref|NP_001050811.1| Os03g0656900 [Oryza sativa Japonica Group]
gi|31415975|gb|AAP50995.1| unknown protein [Oryza sativa Japonica Group]
gi|108710180|gb|ABF97975.1| antitermination NusB domain-containing protein, putative, expressed
[Oryza sativa Japonica Group]
gi|113549282|dbj|BAF12725.1| Os03g0656900 [Oryza sativa Japonica Group]
gi|125545109|gb|EAY91248.1| hypothetical protein OsI_12862 [Oryza sativa Indica Group]
Length = 287
Score = 240 bits (613), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 108/171 (63%), Positives = 140/171 (81%)
Query: 86 KIDKSGRFCSPRAARELALLVVYAACLEGSDPIRLFEKRLNSRREPGYEFDKSSLLEYNH 145
K+D+SGRFCSPRAARELAL++ YAACLEG+D +RLF++R+++RREPGY FDK+ ++ YNH
Sbjct: 75 KVDRSGRFCSPRAARELALMISYAACLEGADVVRLFDRRISARREPGYVFDKACVVNYNH 134
Query: 146 MSFGGPPVTTETVEEADELLRSDEEESAIEAEVLSAPPKLVYSKLLLRFTRKLLVAVVDK 205
MSFGG P+ T EEA++L+ +E++SA EAEVLSAPPKLVY+ +LR R++LVAV
Sbjct: 135 MSFGGGPLEVGTEEEAEKLMSQNEKDSANEAEVLSAPPKLVYNNFVLRLAREILVAVASG 194
Query: 206 WDAHVHIIDKVVPPIWKDQPAGRILELSILHLAMSEITVVGTRHQIVINEA 256
WD HV II+K+ P WKD+P RILEL ILH+AM+E+T GT H+IVINEA
Sbjct: 195 WDKHVDIINKITPQNWKDEPVARILELCILHIAMAEMTSKGTPHKIVINEA 245
>gi|226509228|ref|NP_001150841.1| LOC100284474 [Zea mays]
gi|195642298|gb|ACG40617.1| RNA binding protein [Zea mays]
Length = 280
Score = 240 bits (613), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 108/171 (63%), Positives = 140/171 (81%)
Query: 86 KIDKSGRFCSPRAARELALLVVYAACLEGSDPIRLFEKRLNSRREPGYEFDKSSLLEYNH 145
K+D+SGRFCSPRAARELAL++ YAACLEG+D +RLF++R+++RREPG+ FD + LL YNH
Sbjct: 73 KVDRSGRFCSPRAARELALMISYAACLEGTDVVRLFDRRISARREPGFVFDXACLLSYNH 132
Query: 146 MSFGGPPVTTETVEEADELLRSDEEESAIEAEVLSAPPKLVYSKLLLRFTRKLLVAVVDK 205
MSFGG P+ T EEA++L +E++SA EA+VLSAPPKLVY+ +LR +R+LLVAV
Sbjct: 133 MSFGGGPLEVGTEEEAEKLTSQNEKDSANEADVLSAPPKLVYNNFVLRLSRELLVAVASG 192
Query: 206 WDAHVHIIDKVVPPIWKDQPAGRILELSILHLAMSEITVVGTRHQIVINEA 256
WD HV IIDK++P WKD+P RILEL ILH+AM+E+T GT H++VINEA
Sbjct: 193 WDKHVEIIDKIIPQAWKDEPVARILELCILHIAMAEMTSKGTPHKVVINEA 243
>gi|345531552|dbj|BAK74849.1| plastid RNA-binding protein NUS1 [Oryza sativa Japonica Group]
Length = 287
Score = 240 bits (612), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 108/171 (63%), Positives = 140/171 (81%)
Query: 86 KIDKSGRFCSPRAARELALLVVYAACLEGSDPIRLFEKRLNSRREPGYEFDKSSLLEYNH 145
K+D+SGRFCSPRAARELAL++ YAACLEG+D +RLF++R+++RREPGY FDK+ ++ YNH
Sbjct: 75 KVDRSGRFCSPRAARELALMISYAACLEGADVVRLFDRRISARREPGYVFDKACVVNYNH 134
Query: 146 MSFGGPPVTTETVEEADELLRSDEEESAIEAEVLSAPPKLVYSKLLLRFTRKLLVAVVDK 205
MSFGG P+ T EEA++L+ +E++SA EAEVLSAPPKLVY+ +LR R++LVAV
Sbjct: 135 MSFGGGPLEVGTEEEAEKLMSQNEKDSANEAEVLSAPPKLVYNNFVLRLAREILVAVASG 194
Query: 206 WDAHVHIIDKVVPPIWKDQPAGRILELSILHLAMSEITVVGTRHQIVINEA 256
WD HV II+K+ P WKD+P RILEL ILH+AM+E+T GT H+IVINEA
Sbjct: 195 WDKHVDIINKITPQNWKDEPVARILELCILHIAMAEMTSKGTPHKIVINEA 245
>gi|18483231|gb|AAL73975.1|AF466201_4 hypothetical protein M3E9.200 [Sorghum bicolor]
Length = 274
Score = 239 bits (611), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 108/171 (63%), Positives = 140/171 (81%)
Query: 86 KIDKSGRFCSPRAARELALLVVYAACLEGSDPIRLFEKRLNSRREPGYEFDKSSLLEYNH 145
K+D+SGRFCSPRAARELAL++ YAACLEG+D +RLF++R+++RREPG+ FDK+ LL YNH
Sbjct: 73 KVDRSGRFCSPRAARELALMISYAACLEGTDVVRLFDRRISARREPGFVFDKACLLSYNH 132
Query: 146 MSFGGPPVTTETVEEADELLRSDEEESAIEAEVLSAPPKLVYSKLLLRFTRKLLVAVVDK 205
MSFGG P+ T EEA++L +E++SA E +VLSAPPKLVY+ +LR +R+LLVAV
Sbjct: 133 MSFGGVPLEVGTEEEAEKLTSQNEKDSANEEDVLSAPPKLVYNNFVLRLSRELLVAVASG 192
Query: 206 WDAHVHIIDKVVPPIWKDQPAGRILELSILHLAMSEITVVGTRHQIVINEA 256
WD HV IIDK++P WKD+P RILEL ILH+AM+E+T GT H++VINEA
Sbjct: 193 WDKHVDIIDKIIPQAWKDEPVARILELCILHIAMAEMTSKGTPHKVVINEA 243
>gi|242038659|ref|XP_002466724.1| hypothetical protein SORBIDRAFT_01g012890 [Sorghum bicolor]
gi|241920578|gb|EER93722.1| hypothetical protein SORBIDRAFT_01g012890 [Sorghum bicolor]
Length = 284
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 107/170 (62%), Positives = 139/170 (81%)
Query: 87 IDKSGRFCSPRAARELALLVVYAACLEGSDPIRLFEKRLNSRREPGYEFDKSSLLEYNHM 146
+D+SGRFCSPRAARELAL++ YAACLEG+D +RLF++R+++RREPG+ FDK+ LL YNHM
Sbjct: 74 VDRSGRFCSPRAARELALMISYAACLEGTDVVRLFDRRISARREPGFVFDKACLLSYNHM 133
Query: 147 SFGGPPVTTETVEEADELLRSDEEESAIEAEVLSAPPKLVYSKLLLRFTRKLLVAVVDKW 206
SFGG P+ T EEA++L +E++SA E +VLSAPPKLVY+ +LR +R+LLVAV W
Sbjct: 134 SFGGVPLEVGTEEEAEKLTSQNEKDSANEEDVLSAPPKLVYNNFVLRLSRELLVAVASGW 193
Query: 207 DAHVHIIDKVVPPIWKDQPAGRILELSILHLAMSEITVVGTRHQIVINEA 256
D HV IIDK++P WKD+P RILEL ILH+AM+E+T GT H++VINEA
Sbjct: 194 DKHVDIIDKIIPQAWKDEPVARILELCILHIAMAEMTSKGTPHKVVINEA 243
>gi|223943803|gb|ACN25985.1| unknown [Zea mays]
gi|413933544|gb|AFW68095.1| hypothetical protein ZEAMMB73_110134 [Zea mays]
Length = 284
Score = 236 bits (603), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 105/171 (61%), Positives = 140/171 (81%)
Query: 86 KIDKSGRFCSPRAARELALLVVYAACLEGSDPIRLFEKRLNSRREPGYEFDKSSLLEYNH 145
K+D+SGRFCSPRAARELAL++ YAACLEG+D +RLF++R+++RREPG+ F+K+ LL YNH
Sbjct: 73 KVDRSGRFCSPRAARELALMISYAACLEGTDVVRLFDRRISARREPGFVFNKACLLNYNH 132
Query: 146 MSFGGPPVTTETVEEADELLRSDEEESAIEAEVLSAPPKLVYSKLLLRFTRKLLVAVVDK 205
MSFGG P+ T +EA++L ++++SA EA+VLSAPPKLVY+ +LR +R+LLVAV
Sbjct: 133 MSFGGGPLEVGTEQEAEKLASQNDKDSANEADVLSAPPKLVYNNYVLRLSRELLVAVASG 192
Query: 206 WDAHVHIIDKVVPPIWKDQPAGRILELSILHLAMSEITVVGTRHQIVINEA 256
WD HV IIDK++P WKD+P RILEL ILH+AM+E+ GT H++VINEA
Sbjct: 193 WDKHVVIIDKIIPQAWKDEPVARILELCILHIAMAEMASKGTPHKVVINEA 243
>gi|357119751|ref|XP_003561597.1| PREDICTED: uncharacterized protein LOC100839883 [Brachypodium
distachyon]
Length = 280
Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 104/171 (60%), Positives = 136/171 (79%)
Query: 86 KIDKSGRFCSPRAARELALLVVYAACLEGSDPIRLFEKRLNSRREPGYEFDKSSLLEYNH 145
K+D+SGRFCSPRAARELAL+V YAACLEG+D +RLF++R+ +RREPGY F+K+SL YN
Sbjct: 70 KVDRSGRFCSPRAARELALMVAYAACLEGADVVRLFDRRVAARREPGYVFNKASLQSYNF 129
Query: 146 MSFGGPPVTTETVEEADELLRSDEEESAIEAEVLSAPPKLVYSKLLLRFTRKLLVAVVDK 205
MSF G P+ T EEA++L+ +E++SA EAEVLSAPP+LVY+ +LR R++LVAV
Sbjct: 130 MSFCGGPLEVATEEEAEKLMSQNEKDSANEAEVLSAPPRLVYNNFVLRLAREMLVAVASG 189
Query: 206 WDAHVHIIDKVVPPIWKDQPAGRILELSILHLAMSEITVVGTRHQIVINEA 256
WD HV II+K++P WKD+P RILEL ILH+AM+E+T T H++ INEA
Sbjct: 190 WDQHVEIINKIIPQSWKDEPVARILELCILHIAMAEMTSKETPHKVAINEA 240
>gi|326522879|dbj|BAJ88485.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 275
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 134/171 (78%)
Query: 86 KIDKSGRFCSPRAARELALLVVYAACLEGSDPIRLFEKRLNSRREPGYEFDKSSLLEYNH 145
K+D+SGRFCSPRAARELAL+V YAACLEG+D +R F++R+ +RREPGY F+K+ + YN
Sbjct: 65 KVDRSGRFCSPRAARELALMVSYAACLEGADVVRHFDRRVAARREPGYVFNKACVQSYNF 124
Query: 146 MSFGGPPVTTETVEEADELLRSDEEESAIEAEVLSAPPKLVYSKLLLRFTRKLLVAVVDK 205
MSF G P+ T EEA++L+ +E++SA EAEVLSAPP+LVY+ +LR R +LVAV
Sbjct: 125 MSFCGGPLEVATEEEAEKLMSQNEKDSANEAEVLSAPPRLVYNNFVLRLARDMLVAVASG 184
Query: 206 WDAHVHIIDKVVPPIWKDQPAGRILELSILHLAMSEITVVGTRHQIVINEA 256
WD HV +I+K++P WKD+P RILEL ILH+AM+E+T GT H++ INEA
Sbjct: 185 WDQHVEVINKIIPQHWKDEPVARILELCILHIAMAEMTSKGTPHKVAINEA 235
>gi|116788226|gb|ABK24800.1| unknown [Picea sitchensis]
Length = 324
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 94/171 (54%), Positives = 132/171 (77%)
Query: 86 KIDKSGRFCSPRAARELALLVVYAACLEGSDPIRLFEKRLNSRREPGYEFDKSSLLEYNH 145
++DK+GRF SPRAARE AL+V+Y AC+EGSDP+RLFE+R+N + +FD++ L Y+H
Sbjct: 98 RLDKNGRFRSPRAAREFALVVLYEACVEGSDPLRLFERRMNMKTAMSAQFDQTLLEYYDH 157
Query: 146 MSFGGPPVTTETVEEADELLRSDEEESAIEAEVLSAPPKLVYSKLLLRFTRKLLVAVVDK 205
M F G P+ TET E+A L DE+E+ EA +L+APPKLVY+K +L T+K+L AVV++
Sbjct: 158 MHFCGTPLYTETEEQARVLQMEDEKEALTEAAILAAPPKLVYNKFVLSMTKKILAAVVER 217
Query: 206 WDAHVHIIDKVVPPIWKDQPAGRILELSILHLAMSEITVVGTRHQIVINEA 256
WD I+D+ +P WKD+ AGRILEL ++H+AM+EI V+GT++Q+VINEA
Sbjct: 218 WDEQASILDESIPSKWKDESAGRILELCLMHIAMAEIVVLGTQYQVVINEA 268
>gi|226530341|ref|NP_001146783.1| hypothetical protein [Zea mays]
gi|219888735|gb|ACL54742.1| unknown [Zea mays]
gi|413933543|gb|AFW68094.1| hypothetical protein ZEAMMB73_110134 [Zea mays]
Length = 292
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 135/192 (70%), Gaps = 10/192 (5%)
Query: 86 KIDKSGRFCSPRAARELALLVVYAACLEGSDPIRLFEKRLNSRREPGYEFDKSSLLEYNH 145
K+D+SGRFCSPRAARELAL++ YAACLEG+D +RLF++R+++RREPG+ F+K+ LL YNH
Sbjct: 73 KVDRSGRFCSPRAARELALMISYAACLEGTDVVRLFDRRISARREPGFVFNKACLLNYNH 132
Query: 146 MSFGGPPVTTETVEEADELLRSDEEESAIEAEVLSAPPKLVYSKLLLRFTRKLLVAVVDK 205
MSFGG P+ T +EA++L ++++SA EA+VLSAPPKLVY+ +LR +R+LLVAV
Sbjct: 133 MSFGGGPLEVGTEQEAEKLASQNDKDSANEADVLSAPPKLVYNNYVLRLSRELLVAVASG 192
Query: 206 WDAHVHIIDKVVPPIWKDQPAGRILELSILHLAMSEI--TVVGTRHQIVINEARLTLHFL 263
WD HV IIDK++P WK + L ++ S I T + + + + ++ ++
Sbjct: 193 WDKHVVIIDKIIPQAWK------VRYLFLIFYVDSSIPSTCITASNYLYVQQSGSNMYLF 246
Query: 264 FIV--CFSSSTI 273
I+ CFS T+
Sbjct: 247 CILHHCFSHYTV 258
>gi|147795870|emb|CAN61043.1| hypothetical protein VITISV_037528 [Vitis vinifera]
Length = 183
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/184 (53%), Positives = 117/184 (63%), Gaps = 40/184 (21%)
Query: 15 KTHFLFNLRASSS-----PSSWKKFTQSANFAAKNRHVCRNERPNVSCSAAAFAVQETLE 69
K HF+FN SSS P K S ++ P S +A V++ L+
Sbjct: 14 KPHFIFNFNHSSSCQFLTPLPTKLLINSKLLSS----------PRTSLRTSALTVEKPLD 63
Query: 70 KTRESVMASSAKEMMPKIDKSGRFCSPRAARELALLVVYAACLEGSDPIRLFEKRLNSRR 129
K S +EM+P+IDKSGRFCSPRAARELALL+ YAACLEGSDP+RLFE+R+N+RR
Sbjct: 64 K------PSEPREMLPRIDKSGRFCSPRAARELALLIAYAACLEGSDPVRLFERRMNARR 117
Query: 130 -------------------EPGYEFDKSSLLEYNHMSFGGPPVTTETVEEADELLRSDEE 170
EPGYEFDK SLLEYNHMSFGGPPVTTETVEEADELLR++E+
Sbjct: 118 GKAFIWGQLGRHYSTRDFEEPGYEFDKDSLLEYNHMSFGGPPVTTETVEEADELLRNNEK 177
Query: 171 ESAI 174
ESAI
Sbjct: 178 ESAI 181
>gi|449519042|ref|XP_004166544.1| PREDICTED: uncharacterized protein LOC101231047, partial [Cucumis
sativus]
Length = 258
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 77/93 (82%), Positives = 87/93 (93%)
Query: 82 EMMPKIDKSGRFCSPRAARELALLVVYAACLEGSDPIRLFEKRLNSRREPGYEFDKSSLL 141
EM+PK+DKSG+FCSPRAARELAL +VYAACLEGSDP+RLFEKRLN+RRE GYEFDK+SL+
Sbjct: 166 EMIPKVDKSGKFCSPRAARELALSIVYAACLEGSDPVRLFEKRLNARRESGYEFDKTSLM 225
Query: 142 EYNHMSFGGPPVTTETVEEADELLRSDEEESAI 174
EYNHMSFGGPPVT ET+EEADELLR DE +S I
Sbjct: 226 EYNHMSFGGPPVTVETIEEADELLRKDERDSTI 258
>gi|226503425|ref|NP_001146234.1| uncharacterized protein LOC100279806 [Zea mays]
gi|219886309|gb|ACL53529.1| unknown [Zea mays]
Length = 174
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 70/125 (56%), Positives = 93/125 (74%)
Query: 132 GYEFDKSSLLEYNHMSFGGPPVTTETVEEADELLRSDEEESAIEAEVLSAPPKLVYSKLL 191
G ++ LL YNHMSFGG P+ T +EA++L ++++SA EA+VLSAPPKLVY+ +
Sbjct: 9 GSAQGEACLLNYNHMSFGGGPLEVGTEQEAEKLASQNDKDSANEADVLSAPPKLVYNNYV 68
Query: 192 LRFTRKLLVAVVDKWDAHVHIIDKVVPPIWKDQPAGRILELSILHLAMSEITVVGTRHQI 251
LR +R+LLVAV WD HV IIDK++P WKD+P RILEL ILH+AM+E+ GT H++
Sbjct: 69 LRLSRELLVAVASGWDKHVVIIDKIIPQAWKDEPVARILELCILHIAMAEMASKGTPHKV 128
Query: 252 VINEA 256
VINEA
Sbjct: 129 VINEA 133
>gi|42573051|ref|NP_974622.1| antitermination NusB domain-containing protein [Arabidopsis
thaliana]
gi|332659790|gb|AEE85190.1| antitermination NusB domain-containing protein [Arabidopsis
thaliana]
Length = 248
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/102 (77%), Positives = 90/102 (88%), Gaps = 1/102 (0%)
Query: 74 SVMASSAKEM-MPKIDKSGRFCSPRAARELALLVVYAACLEGSDPIRLFEKRLNSRREPG 132
++ A K++ MPKIDKSGR SPRAARELAL+++YAACLEGSDPIRLFEKR+N+RREPG
Sbjct: 74 TISAEEVKDVPMPKIDKSGRLSSPRAARELALVILYAACLEGSDPIRLFEKRINARREPG 133
Query: 133 YEFDKSSLLEYNHMSFGGPPVTTETVEEADELLRSDEEESAI 174
YEFDKSSLLEYNHMSFGGPPV TET EE DEL+R DE+ES I
Sbjct: 134 YEFDKSSLLEYNHMSFGGPPVKTETKEEEDELVRHDEKESKI 175
>gi|302803795|ref|XP_002983650.1| hypothetical protein SELMODRAFT_47118 [Selaginella moellendorffii]
gi|300148487|gb|EFJ15146.1| hypothetical protein SELMODRAFT_47118 [Selaginella moellendorffii]
Length = 196
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 112/172 (65%), Gaps = 4/172 (2%)
Query: 86 KIDKSGRFCSPRAARELALLVVYAACLEGSDPIRLFEKRLNSRREPGYEFDKSSLLEYNH 145
K+DK R SPRAAREL+L V+YA + GSDP+ + E R+ +RRE D+ L +Y+H
Sbjct: 1 KLDKFHRLRSPRAARELSLCVLYAGLVSGSDPLEVLEDRMQARRE---RVDEKVLHQYDH 57
Query: 146 MSFGGPPVTTETVEEADELLRSDEEESAIEAEVLSAPPKLVYSKLLLRFTR-KLLVAVVD 204
+ G P+ + EA EL E++S I+A +L+A P +VY+K +LR+ + K++ A +
Sbjct: 58 DAKSGEPLYVSSESEAKELEFQQEQQSEIDAALLTAHPYVVYNKFVLRYGKEKIIKATSE 117
Query: 205 KWDAHVHIIDKVVPPIWKDQPAGRILELSILHLAMSEITVVGTRHQIVINEA 256
+ ++ +++P WKD+ G++LE +I+H+A++EI V+GT IVINEA
Sbjct: 118 GREKQEAVVKELLPSTWKDEGNGKLLETTIMHMAIAEIEVLGTSPNIVINEA 169
>gi|302817774|ref|XP_002990562.1| hypothetical protein SELMODRAFT_47116 [Selaginella moellendorffii]
gi|300141730|gb|EFJ08439.1| hypothetical protein SELMODRAFT_47116 [Selaginella moellendorffii]
Length = 196
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 111/172 (64%), Gaps = 4/172 (2%)
Query: 86 KIDKSGRFCSPRAARELALLVVYAACLEGSDPIRLFEKRLNSRREPGYEFDKSSLLEYNH 145
K+DK R SPRAAREL+L V+YA + GSDP+ + E R+ +RRE D+ L +Y+H
Sbjct: 1 KLDKFHRLRSPRAARELSLCVLYAGLVSGSDPLEVLEDRMQARRE---RVDEKVLDQYDH 57
Query: 146 MSFGGPPVTTETVEEADELLRSDEEESAIEAEVLSAPPKLVYSKLLLRFTR-KLLVAVVD 204
+ G P+ EA EL E++S I+A +L+A P +VY+K +LR+ + K++ A +
Sbjct: 58 DAKSGEPLYVSCESEAKELEFQQEQQSEIDAALLTAHPCVVYNKFVLRYGKEKIIKATSE 117
Query: 205 KWDAHVHIIDKVVPPIWKDQPAGRILELSILHLAMSEITVVGTRHQIVINEA 256
+ ++ +++P WKD+ G++LE +I+H+A++EI V+GT IVINEA
Sbjct: 118 GREKQEAVVKELLPSTWKDESNGKLLETTIMHMAIAEIEVLGTSPNIVINEA 169
>gi|194700218|gb|ACF84193.1| unknown [Zea mays]
gi|414872057|tpg|DAA50614.1| TPA: hypothetical protein ZEAMMB73_306113 [Zea mays]
Length = 181
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 56/88 (63%), Positives = 75/88 (85%)
Query: 86 KIDKSGRFCSPRAARELALLVVYAACLEGSDPIRLFEKRLNSRREPGYEFDKSSLLEYNH 145
K+D+SGRFCSPRAARELAL++ YAACLEG+D +RLF++R+++RREPG+ FDK+ LL YNH
Sbjct: 73 KVDRSGRFCSPRAARELALMISYAACLEGTDVVRLFDRRISARREPGFVFDKACLLSYNH 132
Query: 146 MSFGGPPVTTETVEEADELLRSDEEESA 173
MSFGG P+ T EEA++L +E++SA
Sbjct: 133 MSFGGGPLEVGTEEEAEKLTSQNEKDSA 160
>gi|168011444|ref|XP_001758413.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690448|gb|EDQ76815.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 207
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 98/171 (57%), Gaps = 1/171 (0%)
Query: 86 KIDKSGRFCSPRAARELALLVVYAACLEGSDPIRLFEKRLNSRREPGYEFDKSSLLEYNH 145
K+DK GR +PRAARELAL V+YAA + G P+++FE R+ R FDK+ L Y H
Sbjct: 13 KLDKFGRLRTPRAARELALSVLYAAFVSGVHPLKVFEDRVKQRVV-ANSFDKTLLEGYEH 71
Query: 146 MSFGGPPVTTETVEEADELLRSDEEESAIEAEVLSAPPKLVYSKLLLRFTRKLLVAVVDK 205
G V E A L + + E+++EA VL+APP LVY+ LR R L+ +
Sbjct: 72 RPDVGENVVVEDEATAMALEEALDAEASLEASVLTAPPPLVYNSFALRLARTLVKETAYR 131
Query: 206 WDAHVHIIDKVVPPIWKDQPAGRILELSILHLAMSEITVVGTRHQIVINEA 256
W I+ +++P WK QP +L++ +L +A++EI ++V+NEA
Sbjct: 132 WLQQEAILMEIIPLKWKVQPKAALLQICVLQMALAEIEATDVPPRVVVNEA 182
>gi|147795869|emb|CAN61042.1| hypothetical protein VITISV_037527 [Vitis vinifera]
Length = 360
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/130 (50%), Positives = 84/130 (64%), Gaps = 10/130 (7%)
Query: 152 PVTTETVEEADELLRS-DEEESAIEAEVLSAPPKL--VYSKLLLR-FTRKLLVAVVDKWD 207
P +EE + L DE++ +I+ ++ + K + + R FTRKLLVAVVDKW+
Sbjct: 177 PFNDWELEEVERLFCCLDEKKVSIDLSMIGSWKKWKGCFVAWVGRSFTRKLLVAVVDKWN 236
Query: 208 AHVHIIDKVVPPIWKDQPAGRILELSILHLAMSEITVVGTRHQIVINEAR------LTLH 261
+HV +IDKV PP WK++PAGRILEL ILHLAMSEI V+GTRHQIVINE H
Sbjct: 237 SHVLVIDKVAPPNWKNEPAGRILELCILHLAMSEIAVLGTRHQIVINEVNSFSFSLSFSH 296
Query: 262 FLFIVCFSSS 271
L + C S+S
Sbjct: 297 DLPVKCISTS 306
>gi|413933542|gb|AFW68093.1| hypothetical protein ZEAMMB73_110134 [Zea mays]
Length = 140
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 50/65 (76%), Gaps = 7/65 (10%)
Query: 86 KIDKSGRFCSPRAARELALLVVYAACLEGSDPIRLFEKRLNSRR------EPGYEFDKSS 139
K+D+SGRFCSPRAARELAL++ YAACLEG+D +RLF++R+++RR +P YE + +
Sbjct: 73 KVDRSGRFCSPRAARELALMISYAACLEGTDVVRLFDRRISARRGMPIELQP-YELWRGT 131
Query: 140 LLEYN 144
+N
Sbjct: 132 ARGWN 136
>gi|330501813|ref|YP_004378682.1| DNA-binding transcriptional regulator FruR [Pseudomonas mendocina
NK-01]
gi|328916099|gb|AEB56930.1| DNA-binding transcriptional regulator FruR [Pseudomonas mendocina
NK-01]
Length = 328
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 163 ELLRSDEEESAIEAEVLSAPPKLVYSKLLLRFTRKLLVAVVDKWDAHVHIIDKVVPPIWK 222
EL RS E+ I A L A L Y ++ L V VD+ + VHI V
Sbjct: 111 ELFRSRRCEALIVASCLPADDPL-YPTIV---AAGLPVIAVDRALSPVHIRSVVS----D 162
Query: 223 DQPAGRILELSILHLAMSEITVVGTRHQIVINEAR 257
D+ AGR L S+L LA I ++G R ++VI++AR
Sbjct: 163 DEQAGRTLTESLLALAPRHIALLGAREELVISQAR 197
>gi|408907935|emb|CCM10964.1| Transcription termination protein NusB [Helicobacter heilmannii
ASB1.4]
Length = 133
Score = 37.0 bits (84), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 177 EVLSAPPKLVYSKLLLR----FTRKLLVAVVDKWDAHVHIIDKVVPPIWKDQPAGRI--L 230
E+ A P L+ K + F +LL V+++ +H +D + P+ KD RI +
Sbjct: 24 EIFKAAPTLLEEKKIRNAQQCFALELLGGVLER----MHALDAALQPLLKDWDLKRIGRM 79
Query: 231 ELSILHLAMSEITVVGTRHQIVINEA 256
E +IL L EI T+ +VINEA
Sbjct: 80 ERAILRLGAFEILYTKTKPAVVINEA 105
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.130 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,848,944,019
Number of Sequences: 23463169
Number of extensions: 141893587
Number of successful extensions: 384409
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 384365
Number of HSP's gapped (non-prelim): 38
length of query: 273
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 133
effective length of database: 9,074,351,707
effective search space: 1206888777031
effective search space used: 1206888777031
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 75 (33.5 bits)