BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024061
(273 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SE96|GEML1_ARATH GEM-like protein 1 OS=Arabidopsis thaliana GN=FIP1 PE=1 SV=1
Length = 259
Score = 324 bits (831), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 167/241 (69%), Positives = 197/241 (81%), Gaps = 14/241 (5%)
Query: 28 HSSDYAPYPKIDPNDVAPPPQNWSNVSTATGPAPINESAATTMPAESNPYVSPSPIEPSS 87
HSSDYAPYPK+DP DV PP TG +AATTMPAESNPYVSPSP +
Sbjct: 28 HSSDYAPYPKLDPTDVTPP----PPQPIPTG------AAATTMPAESNPYVSPSP----A 73
Query: 88 SKNKLESVKGALSNWGKKAAEATKRAEDLAGNMWQHLKTGPSLADAAVGRIAQRTKVLAE 147
+N ++SVK L WGK AA+ATK+AEDLAGN WQHLKTGPS+ADAAV RIAQ TK+LAE
Sbjct: 74 PRNTMDSVKDTLGKWGKMAADATKKAEDLAGNFWQHLKTGPSVADAAVSRIAQGTKILAE 133
Query: 148 GGYEKIFRQSFDTVPEEQLLKTYACYLSTSAGPVVGVLYLSTAKLAFCSDDPLSYKVGDE 207
GGYEK+F+Q+FD +P+E+LLKTYACYLSTSAGPV+GV+YLST KLAF SD+PLSYK G++
Sbjct: 134 GGYEKVFKQTFDCLPDEKLLKTYACYLSTSAGPVLGVMYLSTHKLAFSSDNPLSYKEGEQ 193
Query: 208 TQWSYYKVVIPLSQLKAVNPSTSKAKPAEKYIQVISVDNHEFWFMGFVHYDSAVKNLLGA 267
T WSYYKVV+P +QLKAVNPSTS+ ++KYIQVIS+DNHEFWFMGFV Y+SAVK+L A
Sbjct: 194 TLWSYYKVVLPANQLKAVNPSTSRVNTSDKYIQVISIDNHEFWFMGFVTYESAVKSLQEA 253
Query: 268 L 268
+
Sbjct: 254 V 254
>sp|Q8S8F8|GEM_ARATH GLABRA2 expression modulator OS=Arabidopsis thaliana GN=GEM PE=1
SV=1
Length = 299
Score = 303 bits (776), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 141/196 (71%), Positives = 165/196 (84%), Gaps = 2/196 (1%)
Query: 75 NPYVSPSPIEPS--SSKNKLESVKGALSNWGKKAAEATKRAEDLAGNMWQHLKTGPSLAD 132
NPY++ SP E S S K+ +E+VKG L WGK+ AEA K+ E LAGN WQHL+T PS AD
Sbjct: 96 NPYIARSPAETSDASLKDTMETVKGVLGRWGKRVAEAAKKTESLAGNTWQHLRTAPSFAD 155
Query: 133 AAVGRIAQRTKVLAEGGYEKIFRQSFDTVPEEQLLKTYACYLSTSAGPVVGVLYLSTAKL 192
AA+GRIAQ TKV AEGGYEKIFRQ+F+T PEEQLL ++ACYLSTSAGPV+GVLY+S+AKL
Sbjct: 156 AAMGRIAQSTKVFAEGGYEKIFRQTFETDPEEQLLNSFACYLSTSAGPVMGVLYISSAKL 215
Query: 193 AFCSDDPLSYKVGDETQWSYYKVVIPLSQLKAVNPSTSKAKPAEKYIQVISVDNHEFWFM 252
A+CSD+PLSYK GD+T+WSYYKVVIPL QLKAVNPS S PAEKYIQVISVDNHEFWFM
Sbjct: 216 AYCSDNPLSYKNGDQTEWSYYKVVIPLHQLKAVNPSASIVNPAEKYIQVISVDNHEFWFM 275
Query: 253 GFVHYDSAVKNLLGAL 268
GF++YD AV +L +L
Sbjct: 276 GFLNYDGAVTSLQDSL 291
>sp|Q9M063|GEML3_ARATH Putative GEM-like protein 3 OS=Arabidopsis thaliana GN=At4g40100
PE=3 SV=2
Length = 239
Score = 240 bits (613), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 128/223 (57%), Positives = 157/223 (70%), Gaps = 24/223 (10%)
Query: 49 NWSNVSTATGPAPINESAATTMPAESNPYVSPSPIEPS--SSKNKLESVKGALSNWGKKA 106
+W+ + PAP ++ +++ A SNPYV+ +P E S S K +ESVKG L WG++
Sbjct: 29 HWNPELVSESPAPDEKALSSSSAARSNPYVARAPTETSDASLKETMESVKGVLGRWGRRV 88
Query: 107 AEATKRAEDLAGNMWQH-LKTGPSLADAAVGRIAQRTKVLAEGGYEKIFRQSFDTVPEEQ 165
EA +AE LAGN WQH L+ AA+GRIAQ TKVLAEGGYEKIFRQ+F+TVPEEQ
Sbjct: 89 GEAAMKAESLAGNTWQHPLR-------AAMGRIAQSTKVLAEGGYEKIFRQTFETVPEEQ 141
Query: 166 LLKTYACYLSTSAGPVVGVLYLSTAKLAFCSDDPLSYKVGDETQWSYYKVVIPLSQLKAV 225
L ++ACYLSTSAGPV+GVLY+STAKLA+CSD L VVIPL QLK+V
Sbjct: 142 LQNSFACYLSTSAGPVMGVLYVSTAKLAYCSDTSL--------------VVIPLHQLKSV 187
Query: 226 NPSTSKAKPAEKYIQVISVDNHEFWFMGFVHYDSAVKNLLGAL 268
NPS S PAEKYIQVISVD+HEFWFMGF++Y+ AV +L L
Sbjct: 188 NPSISTVNPAEKYIQVISVDDHEFWFMGFLNYEGAVTSLQDTL 230
>sp|Q9LYV6|GEML5_ARATH GEM-like protein 5 OS=Arabidopsis thaliana GN=At5g13200 PE=1 SV=1
Length = 272
Score = 202 bits (514), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/241 (42%), Positives = 147/241 (60%), Gaps = 19/241 (7%)
Query: 39 DPNDVAPPPQNWSNVSTATGPAPI----NESAATTMPAESN-----PYVSPSPIEPSSSK 89
+P+ +P + W AP+ N+ AA + ++ PYV SP+E ++
Sbjct: 28 EPSSSSPDQKKWGTHVMGAPAAPVAHPDNQQAAAWVAGDNQQTQYQPYVIYSPVEHPTTN 87
Query: 90 NKLESVKGALSNWGKKAAEATKRAEDLAGNMWQHLKTGPSLADAAVGRIAQRTKVLAEGG 149
N LE V G W +KA E +A N+W +LKTGPS+++ A G++ K + +GG
Sbjct: 88 NPLEPVIGMFHTWSRKA-------ETVARNLWHNLKTGPSMSETAWGKVNLTAKAITKGG 140
Query: 150 YEKIFRQSFDTVPEEQLLKTYACYLSTSAGPVVGVLYLSTAKLAFCSDDPLSYKV--GDE 207
+E +FRQ F T P E L KT+ACYLST+ GPV G +YLS A++AFCSD PL + G E
Sbjct: 141 FESLFRQIFGTEPNETLKKTFACYLSTTTGPVAGTVYLSNARVAFCSDRPLYFTAPSGQE 200
Query: 208 TQWSYYKVVIPLSQLKAVNPSTSKAKPAEKYIQVISVDNHEFWFMGFVHYDSAVKNLLGA 267
+ WSYY+VV+PL+ + VNP K P EKYIQ+ +VD H+FWFMGFV+Y+ A +LL +
Sbjct: 201 S-WSYYRVVVPLANVATVNPVVVKETPPEKYIQLTTVDGHDFWFMGFVNYEKATHHLLTS 259
Query: 268 L 268
+
Sbjct: 260 V 260
>sp|Q9M122|GEML2_ARATH GEM-like protein 2 OS=Arabidopsis thaliana GN=At4g01600 PE=2 SV=1
Length = 233
Score = 169 bits (427), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 125/196 (63%), Gaps = 2/196 (1%)
Query: 75 NPYVSPSPIEPSSSKNKLESVKGALSNWGKKAAEATKRAEDLAGNMWQHLKTGPSLADAA 134
NPYV + +S K + V L+ GKK +AT++AE L G + HLK PS++DAA
Sbjct: 29 NPYVHITSPTSASDKRSKDKVLEVLNRCGKKVEDATRKAEALVGGLKDHLKFSPSISDAA 88
Query: 135 VGRIAQRTKVLAEGGYEKIFRQSFDTVPEEQLLKTYACYLSTSAGPVVGVLYLSTAKLAF 194
+ R++Q TK++ EGG E++F++ F + E+LL ++ CY+ST++GPV GV+Y+S ++AF
Sbjct: 89 MARLSQGTKMIVEGGPERVFQREFGVLAVEKLLDSFVCYISTTSGPVTGVIYISNRRIAF 148
Query: 195 CSDDPLSY--KVGDETQWSYYKVVIPLSQLKAVNPSTSKAKPAEKYIQVISVDNHEFWFM 252
CSD + G +YYKVV+ ++ +++ ST+ KP+E+Y+ +++ D EFWFM
Sbjct: 149 CSDYAIRLPSSAGGNGVAAYYKVVMEWEKISSISSSTNVLKPSERYVHMVTRDGFEFWFM 208
Query: 253 GFVHYDSAVKNLLGAL 268
GFV Y A L AL
Sbjct: 209 GFVSYIDAFNCLNKAL 224
>sp|Q9FMW4|GEML8_ARATH Putative GEM-like protein 8 OS=Arabidopsis thaliana GN=At5g23370
PE=3 SV=1
Length = 219
Score = 135 bits (339), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 107/187 (57%), Gaps = 12/187 (6%)
Query: 85 PSSSKNKLESVKGALSNWGKKAAEATKRAEDLAGNMWQHLKTGPSLADAAVGRIAQRTKV 144
P+SSK + KG K+ K+ + + K GP L + +++ ++
Sbjct: 36 PTSSKFSFLTGKG-------KSMLRKKKNDSFTNGVRDQDKLGPKLTETVKRKLSLGARI 88
Query: 145 LAEGGYEKIFRQSFDTVPEEQLLKTYACYLSTSAGPVVGVLYLSTAKLAFCSDDPLSYKV 204
L GG EKI+++ F EE+L K Y CYLST+AGP+ G+L++S+ K+AFCS+ S KV
Sbjct: 89 LQMGGLEKIYKRLFKVSDEEKLFKAYQCYLSTTAGPIAGLLFISSKKIAFCSER--SIKV 146
Query: 205 GD---ETQWSYYKVVIPLSQLKAVNPSTSKAKPAEKYIQVISVDNHEFWFMGFVHYDSAV 261
E +YKV IPL ++ VN S + KP++KY++V++VD +FWFMGF+ Y A
Sbjct: 147 ASPQGELNRVHYKVSIPLCKINGVNQSQNTTKPSQKYLEVVTVDGFDFWFMGFLSYQKAF 206
Query: 262 KNLLGAL 268
L AL
Sbjct: 207 NCLEQAL 213
>sp|Q9FMW6|GEML6_ARATH GEM-like protein 6 OS=Arabidopsis thaliana GN=At5g23350 PE=2 SV=2
Length = 218
Score = 134 bits (337), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 106/187 (56%), Gaps = 12/187 (6%)
Query: 85 PSSSKNKLESVKGALSNWGKKAAEATKRAEDLAGNMWQHLKTGPSLADAAVGRIAQRTKV 144
P+SSK + KG KK T A D K GP L + +++ K+
Sbjct: 36 PTSSKVSYLTGKGKSMLRKKKTDSFTNGARD-------QDKLGPKLTETVKRKLSLGAKI 88
Query: 145 LAEGGYEKIFRQSFDTVPEEQLLKTYACYLSTSAGPVVGVLYLSTAKLAFCSDDPLSYKV 204
L GG EKI+++ F +E+L K Y CYLST+AGP+ G+L++S+ K+AFCS+ S KV
Sbjct: 89 LQMGGLEKIYKRLFKVCDQEKLFKAYQCYLSTTAGPIAGLLFISSKKIAFCSER--SIKV 146
Query: 205 GD---ETQWSYYKVVIPLSQLKAVNPSTSKAKPAEKYIQVISVDNHEFWFMGFVHYDSAV 261
+YKV IPL ++ VN S + KP++KY++++++DN +FWFMGFV Y A
Sbjct: 147 ASPQGVLSRVHYKVSIPLCKINGVNQSQNTKKPSQKYLEIVTIDNFDFWFMGFVSYQKAF 206
Query: 262 KNLLGAL 268
L AL
Sbjct: 207 NCLEKAL 213
>sp|Q9FMW5|GEML7_ARATH GEM-like protein 7 OS=Arabidopsis thaliana GN=At5g23360 PE=2 SV=1
Length = 210
Score = 132 bits (332), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 99/162 (61%), Gaps = 7/162 (4%)
Query: 111 KRAEDLAGNMWQHLKTGPSLADAAVGRIAQRTKVLAEGGYEKIFRQSFDTVPEEQLLKTY 170
K+ + K GP L + +++ K+L GG EKI+++ F +E+L K Y
Sbjct: 47 KKTDSFTNGARDQDKLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDKEKLFKAY 106
Query: 171 ACYLSTSAGPVVGVLYLSTAKLAFCSDDPLSYKV----GDETQWSYYKVVIPLSQLKAVN 226
CYLST+ G + G+L++S+ K+AFCS+ S KV GD T+ +YKV IPL ++ VN
Sbjct: 107 QCYLSTTEGSIAGLLFISSKKIAFCSER--SIKVTSPQGDLTRV-HYKVSIPLCKINGVN 163
Query: 227 PSTSKAKPAEKYIQVISVDNHEFWFMGFVHYDSAVKNLLGAL 268
S + KP+++Y++V++VDN++FWFMGFV Y A L AL
Sbjct: 164 QSQNTKKPSQRYLEVVTVDNYDFWFMGFVSYQKAFNCLEKAL 205
>sp|Q9FTA0|GEML4_ARATH GEM-like protein 4 OS=Arabidopsis thaliana GN=At5g08350 PE=2 SV=1
Length = 222
Score = 130 bits (326), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 112/202 (55%), Gaps = 20/202 (9%)
Query: 71 PAESNPYVSPSPIEPSSSKNKLESVKGALSNWGKKAAEATKRAEDLAGNMWQHLKTGPSL 130
PA N + P+ SS K++ +VK L K+ + + K P L
Sbjct: 27 PASFNKFRVPA----SSKKSEQSNVKSILKR---------KKTDGFTNGVRDQSKIRPKL 73
Query: 131 ADAAVGRIAQRTKVLAEGGYEKIFRQSFDTVPEEQLLKTYACYLSTSAGPVVGVLYLSTA 190
+ +++ ++L GG EKIF++ F E+L K Y CYLST+AGP+ G+L++S+
Sbjct: 74 TETVKRKLSLGARILQVGGLEKIFKRLFRVSEGEKLFKMYQCYLSTTAGPIAGLLFISSK 133
Query: 191 KLAFCSDDPLSYKV----GDETQWSYYKVVIPLSQLKAVNPSTSKAKPAEKYIQVISVDN 246
K+AFCS+ S KV GD + +YKV IPL ++ VN S + KP++KY++V++VD
Sbjct: 134 KMAFCSER--SIKVDSPQGDIIRV-HYKVSIPLCKIDRVNQSQNTKKPSQKYLEVVTVDG 190
Query: 247 HEFWFMGFVHYDSAVKNLLGAL 268
+FWFMGF+ Y A L AL
Sbjct: 191 FDFWFMGFLSYQKAFNCLEKAL 212
>sp|Q4WXX4|RNA14_ASPFU mRNA 3'-end-processing protein rna14 OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=rna14 PE=3 SV=1
Length = 1029
Score = 37.0 bits (84), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 70/162 (43%), Gaps = 25/162 (15%)
Query: 28 HSSDYAPYPKIDPNDVAPPPQNWSNVSTATGPAPINESAATTMPAESNPYVSPSPIEPSS 87
H+S Y+P P + P S+V+ A G + N A + + + +P+P PS+
Sbjct: 193 HNS-YSPAPAVAPK---------SDVAVAAGQSLYNSHALQSGNVQDSATATPTPDSPST 242
Query: 88 SKNKL-------------ESVKGALSNWGKKAAEATKRAE-DLAGNMWQH-LKTGPSLAD 132
SK +L E +G + W + E R D A ++++ LK P A+
Sbjct: 243 SKGRLPHDRVGILEDRIQEDPRGDIPAWLELINEHRSRNRFDSARDVFERFLKVFPFAAE 302
Query: 133 AAVGRIAQRTKVLAEGGYEKIFRQSFDTVPEEQLLKTYACYL 174
V +++ E+IF ++ T+P+ QL Y Y+
Sbjct: 303 QWVAYAKMESELNDLYRLEQIFNRTLLTIPDVQLWSVYLDYV 344
>sp|Q4WID6|ATG26_ASPFU Sterol 3-beta-glucosyltransferase OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=atg26 PE=3 SV=2
Length = 1405
Score = 37.0 bits (84), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 46/110 (41%), Gaps = 13/110 (11%)
Query: 150 YEKIFRQSFDTVPEEQLLKTYACYLSTSAGPVVGVLYLSTAKLAFCSDDPLSYKVGDETQ 209
Y FR F P E+L TY YL P+ G +Y+S KL F S P G T
Sbjct: 722 YGDRFRAHFALPPTEKLQATYFAYLHRVL-PLYGKIYVSQKKLCFRSLIP-----GTRT- 774
Query: 210 WSYYKVVIPLSQLKAVNPSTSKAKPAEKYIQVISVDNHEFWFMGFVHYDS 259
K+++PL ++ N K + VI + HE F F D+
Sbjct: 775 ----KMILPLRDIE--NVEKEKGFRFGYHGLVIIIRGHEELFFEFRTSDA 818
>sp|Q9UKF5|ADA29_HUMAN Disintegrin and metalloproteinase domain-containing protein 29
OS=Homo sapiens GN=ADAM29 PE=1 SV=3
Length = 820
Score = 37.0 bits (84), Expect = 0.15, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 21 MQQQQEPHSSDYAPYPKID--PNDVAPPPQNWSNVSTATGPAPINESAATTMPAESNPYV 78
+++QQ+ + KI P+++ P Q W S + P ++S MP++S P V
Sbjct: 704 IKKQQDVQTPSAKEEEKIQRRPHELPPQSQPWVMPSQSQPPVTPSQSHPQVMPSQSQPPV 763
Query: 79 SPSPIEP 85
+PS +P
Sbjct: 764 TPSQSQP 770
Score = 33.9 bits (76), Expect = 1.4, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 14/89 (15%)
Query: 11 ETKASSETHHMQQQQEPHSSDYAPYPKIDPNDVAPP---PQNWSNVSTATGPAPINESAA 67
E S+ M Q +P + +P++ P+ PP Q+ V + P+
Sbjct: 727 ELPPQSQPWVMPSQSQPPVTPSQSHPQVMPSQSQPPVTPSQSQPRVMPSQSQPPV----- 781
Query: 68 TTMPAESNPYVSPS----PIEPSSSKNKL 92
MP++S+P ++PS P+ PS + +L
Sbjct: 782 --MPSQSHPQLTPSQSQPPVTPSQRQPQL 808
>sp|A7KAN4|ATG26_PENCW Sterol 3-beta-glucosyltransferase OS=Penicillium chrysogenum
(strain ATCC 28089 / DSM 1075 / Wisconsin 54-1255)
GN=atg26 PE=3 SV=1
Length = 1374
Score = 35.8 bits (81), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 45/110 (40%), Gaps = 13/110 (11%)
Query: 150 YEKIFRQSFDTVPEEQLLKTYACYLSTSAGPVVGVLYLSTAKLAFCSDDPLSYKVGDETQ 209
Y FR F P E+L TY YL P+ G +Y+S KL F S P G T
Sbjct: 702 YGDRFRAHFALPPTEKLQATYYAYLHRVL-PLYGKIYISQKKLCFRSLIP-----GTRT- 754
Query: 210 WSYYKVVIPLSQLKAVNPSTSKAKPAEKYIQVISVDNHEFWFMGFVHYDS 259
K+++P ++ N K + V+ + HE F F DS
Sbjct: 755 ----KMILPFKDIE--NVEKEKGFRFGYHGLVVIIRGHEELFFEFNASDS 798
>sp|Q0CKU4|ATG26_ASPTN Sterol 3-beta-glucosyltransferase OS=Aspergillus terreus (strain
NIH 2624 / FGSC A1156) GN=atg26 PE=3 SV=1
Length = 1396
Score = 35.4 bits (80), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 47/112 (41%), Gaps = 17/112 (15%)
Query: 154 FRQSFDTVPEEQLLKTYACYLSTSAGPVVGVLYLSTAKLAFCSDDPLSYKVGDETQWSYY 213
FR F P E+L TY YL P+ G +Y+S KL F S P G T
Sbjct: 721 FRAHFALPPTEKLQATYFAYLHRVL-PLYGKIYVSQKKLCFRSLLP-----GTRT----- 769
Query: 214 KVVIPLSQLKAVNPSTSKAKPAEKYIQVISVDNHEFWFMGF----VHYDSAV 261
K+++PL ++ N K + V+ + HE F F V D AV
Sbjct: 770 KMILPLKDVE--NVEKEKGFRFGYHGLVVIIRGHEELFFEFNAADVRDDCAV 819
>sp|Q9FGS8|C2GR2_ARATH C2 and GRAM domain-containing protein At5g50170 OS=Arabidopsis
thaliana GN=At5g50170 PE=2 SV=1
Length = 1027
Score = 34.7 bits (78), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 154 FRQSFDTVPEEQLLKTYACYLSTSAGPVVGVLYLSTAKLAFCSD 197
F++ F EE LLK Y CYL PV G L+LS +AF S+
Sbjct: 694 FQKLFGLPHEEFLLKEYTCYLKRKL-PVQGKLFLSARIVAFYSN 736
>sp|P54265|DMPK_MOUSE Myotonin-protein kinase OS=Mus musculus GN=Dmpk PE=1 SV=1
Length = 631
Score = 32.7 bits (73), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 34/80 (42%)
Query: 43 VAPPPQNWSNVSTATGPAPINESAATTMPAESNPYVSPSPIEPSSSKNKLESVKGALSNW 102
V+PP Q PAP+ E+ T + + + S +LE+++ A N+
Sbjct: 442 VSPPDQVAEEADLVAVPAPVAEAETTVTLQQLQEALEEEVLTRQSLSRELEAIRTANQNF 501
Query: 103 GKKAAEATKRAEDLAGNMWQ 122
+ EA R DL ++ Q
Sbjct: 502 SSQLQEAEVRNRDLEAHVRQ 521
>sp|Q5B3I8|RNA14_EMENI mRNA 3'-end-processing protein rna14 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=rna14 PE=3 SV=2
Length = 1075
Score = 32.0 bits (71), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 57/142 (40%), Gaps = 25/142 (17%)
Query: 48 QNWSNVSTATGPAPINESAATTMPAESNPYVSPSPIEPSSSKNKL-------------ES 94
QN N T+ P ESA T P+P PS++K +L E
Sbjct: 202 QNLYNSRTSLQPEIARESATAT----------PAPDSPSTAKGRLPHDRVGILEDRIRED 251
Query: 95 VKGALSNWGKKAAEATKRAE-DLAGNMWQH-LKTGPSLADAAVGRIAQRTKVLAEGGYEK 152
+G + W + E R D A ++++ LK P A+ V +++ E+
Sbjct: 252 PRGDIPAWLELINEHRSRNRIDSARDVYERFLKVFPLSAEMWVAYATMESELNELFRLEQ 311
Query: 153 IFRQSFDTVPEEQLLKTYACYL 174
IF ++ T+P QL Y Y+
Sbjct: 312 IFNRTLLTIPAVQLWTVYLDYV 333
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.125 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,531,051
Number of Sequences: 539616
Number of extensions: 4168884
Number of successful extensions: 15620
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 165
Number of HSP's that attempted gapping in prelim test: 15171
Number of HSP's gapped (non-prelim): 570
length of query: 273
length of database: 191,569,459
effective HSP length: 116
effective length of query: 157
effective length of database: 128,974,003
effective search space: 20248918471
effective search space used: 20248918471
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 60 (27.7 bits)