Your job contains 1 sequence.
>024063
MIKMCIEFIFDPIKWPREQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCL
VDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKENEREEELLELV
QNTDFLVLARYMQPVPLQKEAYLGYKLLESLSSKGSLTSYFNMILSGKFLRSYGKDVINI
HHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQ
KSEDVEKQCLAKAIKSYCELRVLPYEMNKTVVF
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 024063
(273 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:505006677 - symbol:AT5G47435 species:3702 "Ara... 507 7.8e-95 2
TAIR|locus:2130893 - symbol:AT4G17360 species:3702 "Arabi... 491 6.2e-93 2
TIGR_CMR|CPS_2482 - symbol:CPS_2482 "formyltetrahydrofola... 246 5.6e-34 2
TIGR_CMR|CPS_4036 - symbol:CPS_4036 "formyltetrahydrofola... 246 5.6e-34 2
UNIPROTKB|G4MX54 - symbol:MGG_08008 "Formyltetrahydrofola... 253 7.1e-34 2
TIGR_CMR|CPS_3620 - symbol:CPS_3620 "formyltetrahydrofola... 241 7.9e-33 2
TIGR_CMR|CJE_0881 - symbol:CJE_0881 "formyltetrahydrofola... 252 1.4e-31 2
ASPGD|ASPL0000054518 - symbol:AN0495 species:162425 "Emer... 265 3.0e-31 2
UNIPROTKB|Q9KQK6 - symbol:VC_1992 "Formyltetrahydrofolate... 244 7.7e-31 2
TIGR_CMR|VC_1992 - symbol:VC_1992 "formyltetrahydrofolate... 244 7.7e-31 2
TIGR_CMR|DET_1237 - symbol:DET_1237 "formyltetrahydrofola... 241 3.3e-30 2
TIGR_CMR|CPS_4357 - symbol:CPS_4357 "formyltetrahydrofola... 218 5.3e-30 2
TIGR_CMR|SO_1624 - symbol:SO_1624 "formyltetrahydrofolate... 229 4.7e-29 2
UNIPROTKB|P37051 - symbol:purU "formyltetrahydrofolate de... 224 5.2e-28 2
TIGR_CMR|APH_0230 - symbol:APH_0230 "phosphoribosylglycin... 189 3.4e-18 2
TIGR_CMR|ECH_0370 - symbol:ECH_0370 "phosphoribosylglycin... 177 4.3e-18 2
TIGR_CMR|CHY_1077 - symbol:CHY_1077 "phosphoribosylglycin... 169 5.5e-18 2
UNIPROTKB|A0A547 - symbol:GART "Glycinamide ribonucleotid... 182 1.1e-14 2
UNIPROTKB|P21872 - symbol:GART "Trifunctional purine bios... 182 1.1e-14 2
UNIPROTKB|F1P3N9 - symbol:GART "Trifunctional purine bios... 182 1.1e-14 2
UNIPROTKB|I3LH11 - symbol:GART "Uncharacterized protein" ... 183 2.2e-14 2
UNIPROTKB|I3LP37 - symbol:GART "Uncharacterized protein" ... 183 2.4e-14 2
UNIPROTKB|G3V918 - symbol:Gart "Phosphoribosylglycinamide... 179 4.6e-14 2
UNIPROTKB|J9NUS5 - symbol:J9NUS5 "Uncharacterized protein... 178 7.0e-14 2
UNIPROTKB|J9P7I4 - symbol:GART "Uncharacterized protein" ... 178 7.4e-14 2
UNIPROTKB|F1PTG8 - symbol:GART "Uncharacterized protein" ... 178 8.1e-14 2
TIGR_CMR|NSE_0474 - symbol:NSE_0474 "phosphoribosylglycin... 177 1.3e-13 1
UNIPROTKB|Q59A32 - symbol:GART "Trifunctional purine bios... 183 6.8e-13 1
MGI|MGI:95654 - symbol:Gart "phosphoribosylglycinamide fo... 177 1.3e-12 2
TIGR_CMR|BA_0297 - symbol:BA_0297 "phosphoribosylglycinam... 163 3.9e-12 1
UNIPROTKB|B4DJ93 - symbol:GART "Phosphoribosylformylglyci... 173 7.0e-12 2
UNIPROTKB|P22102 - symbol:GART "Trifunctional purine bios... 173 1.4e-11 2
UNIPROTKB|Q9I9L3 - symbol:GART "GART-A" species:9031 "Gal... 156 2.2e-11 1
TIGR_CMR|GSU_1759 - symbol:GSU_1759 "phosphoribosylglycin... 134 6.3e-11 2
ZFIN|ZDB-GENE-000616-14 - symbol:gart "phosphoribosylglyc... 173 6.4e-11 1
TIGR_CMR|CPS_3197 - symbol:CPS_3197 "phosphoribosylglycin... 148 1.1e-10 2
UNIPROTKB|Q9KPY5 - symbol:VC_2227 "Phosphoribosylglycinam... 152 3.1e-10 1
TIGR_CMR|VC_2227 - symbol:VC_2227 "phosphoribosylglycinam... 152 3.1e-10 1
WB|WBGene00018174 - symbol:F38B6.4 species:6239 "Caenorha... 156 1.5e-08 1
TIGR_CMR|SO_2761 - symbol:SO_2761 "phosphoribosylglycinam... 137 1.1e-07 1
TIGR_CMR|CJE_0180 - symbol:CJE_0180 "phosphoribosylglycin... 131 1.9e-07 1
UNIPROTKB|H7C489 - symbol:GART "Trifunctional purine bios... 130 2.5e-07 2
UNIPROTKB|P71554 - symbol:purN "Phosphoribosylglycinamide... 134 2.8e-07 1
FB|FBgn0000053 - symbol:ade3 "adenosine 3" species:7227 "... 140 4.8e-07 2
UNIPROTKB|P08179 - symbol:purN species:83333 "Escherichia... 131 6.4e-07 1
TAIR|locus:2029554 - symbol:AT1G31220 species:3702 "Arabi... 128 1.1e-06 2
TIGR_CMR|BA_4004 - symbol:BA_4004 "methionyl-tRNA formylt... 131 2.6e-06 1
TIGR_CMR|CBU_1737 - symbol:CBU_1737 "phosphoribosylglycin... 123 7.5e-06 1
UNIPROTKB|Q97TA1 - symbol:purN "Phosphoribosylglycinamide... 118 1.2e-05 1
TIGR_CMR|SPO_2168 - symbol:SPO_2168 "phosphoribosylglycin... 110 0.00022 1
TAIR|locus:2029012 - symbol:pde194 "pigment defective 194... 115 0.00025 1
TIGR_CMR|CJE_1515 - symbol:CJE_1515 "formyltransferase, p... 94 0.00028 1
UNIPROTKB|P64134 - symbol:fmt "Methionyl-tRNA formyltrans... 110 0.00073 1
>TAIR|locus:505006677 [details] [associations]
symbol:AT5G47435 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM;IDA] [GO:0006189 "'de
novo' IMP biosynthetic process" evidence=IEA] [GO:0008864
"formyltetrahydrofolate deformylase activity" evidence=IEA;ISS]
[GO:0009058 "biosynthetic process" evidence=IEA;ISS] [GO:0009152
"purine ribonucleotide biosynthetic process" evidence=ISS]
[GO:0016742 "hydroxymethyl-, formyl- and related transferase
activity" evidence=IEA;ISS] [GO:0009853 "photorespiration"
evidence=IMP] [GO:0046653 "tetrahydrofolate metabolic process"
evidence=IMP] InterPro:IPR002376 InterPro:IPR004810 Pfam:PF00551
PIRSF:PIRSF036480 PRINTS:PR01575 GO:GO:0005739 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009853 GO:GO:0016742
Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0006189 GO:GO:0046653
HSSP:P22102 eggNOG:COG0788 HOGENOM:HOG000033576 KO:K01433
GO:GO:0008864 PANTHER:PTHR10520:SF7 EMBL:AY059833 EMBL:AY081459
EMBL:AK117593 IPI:IPI00520589 RefSeq:NP_568682.1 RefSeq:NP_851145.1
UniGene:At.22699 ProteinModelPortal:Q93YQ3 SMR:Q93YQ3 IntAct:Q93YQ3
STRING:Q93YQ3 PaxDb:Q93YQ3 PRIDE:Q93YQ3 EnsemblPlants:AT5G47435.1
EnsemblPlants:AT5G47435.2 GeneID:834791 KEGG:ath:AT5G47435
TAIR:At5g47435 InParanoid:Q93YQ3 OMA:FTRQAVR PhylomeDB:Q93YQ3
ProtClustDB:PLN02828 Genevestigator:Q93YQ3 Uniprot:Q93YQ3
Length = 323
Score = 507 (183.5 bits), Expect = 7.8e-95, Sum P(2) = 7.8e-95
Identities = 97/113 (85%), Positives = 104/113 (92%)
Query: 161 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 220
+ ILSG FL+ YGKDVINIHHGLLPSFKGG PAKQAFDAGVKLIGATSHFVTEELD+GP
Sbjct: 211 YMQILSGNFLKGYGKDVINIHHGLLPSFKGGYPAKQAFDAGVKLIGATSHFVTEELDSGP 270
Query: 221 IIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVVF 273
IIEQMVE VSHRDNLR+FVQKSED+EK+CL +AIKSYCELRVLPY NKTVVF
Sbjct: 271 IIEQMVESVSHRDNLRSFVQKSEDLEKKCLTRAIKSYCELRVLPYGTNKTVVF 323
Score = 456 (165.6 bits), Expect = 7.8e-95, Sum P(2) = 7.8e-95
Identities = 82/128 (64%), Positives = 102/128 (79%)
Query: 7 EFIFDPIKWPREQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYG 66
EFIFDP+KWPR Q+DEDF +++ + A+ SVVRVP IDPKYK+A+L SKQ+HCLV+ L+
Sbjct: 86 EFIFDPVKWPRSQVDEDFQTIAQRYGALNSVVRVPSIDPKYKIALLLSKQDHCLVEMLHK 145
Query: 67 WQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCA-KXXXXXXXXXXXVQNTDF 125
WQ+GKLPV+ITCVISNH+R N+HV+RFLERHGIPYHY+ K V++TDF
Sbjct: 146 WQDGKLPVDITCVISNHERASNTHVMRFLERHGIPYHYVSTTKENKREDDILELVKDTDF 205
Query: 126 LVLARYMQ 133
LVLARYMQ
Sbjct: 206 LVLARYMQ 213
>TAIR|locus:2130893 [details] [associations]
symbol:AT4G17360 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM;IDA] [GO:0006189 "'de
novo' IMP biosynthetic process" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0008864
"formyltetrahydrofolate deformylase activity" evidence=IEA;ISS]
[GO:0009058 "biosynthetic process" evidence=IEA;ISS] [GO:0009152
"purine ribonucleotide biosynthetic process" evidence=ISS]
[GO:0016742 "hydroxymethyl-, formyl- and related transferase
activity" evidence=IEA;ISS] [GO:0009853 "photorespiration"
evidence=IMP] [GO:0046653 "tetrahydrofolate metabolic process"
evidence=IMP] [GO:0000023 "maltose metabolic process" evidence=RCA]
[GO:0019252 "starch biosynthetic process" evidence=RCA] [GO:0043085
"positive regulation of catalytic activity" evidence=RCA]
InterPro:IPR001555 InterPro:IPR002376 InterPro:IPR004810
Pfam:PF00551 PIRSF:PIRSF036480 PRINTS:PR01575 PROSITE:PS00373
GO:GO:0005739 EMBL:CP002687 GO:GO:0009853 GO:GO:0016742
GO:GO:0008168 GO:GO:0032259 Gene3D:3.40.50.170 SUPFAM:SSF53328
GO:GO:0006189 GO:GO:0046653 KO:K01433 GO:GO:0008864
PANTHER:PTHR10520:SF7 IPI:IPI00516899 RefSeq:NP_193467.2
UniGene:At.33006 UniGene:At.48870 ProteinModelPortal:F4JP46
SMR:F4JP46 PRIDE:F4JP46 EnsemblPlants:AT4G17360.1 GeneID:827448
KEGG:ath:AT4G17360 OMA:HKTVVFK Uniprot:F4JP46
Length = 328
Score = 491 (177.9 bits), Expect = 6.2e-93, Sum P(2) = 6.2e-93
Identities = 93/113 (82%), Positives = 102/113 (90%)
Query: 161 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 220
+ +LSG FL+ YGKDVINIHHGLLPSFKG P KQAFDAGVKLIGAT+HFVTEELD+GP
Sbjct: 216 YMQLLSGNFLKGYGKDVINIHHGLLPSFKGRNPVKQAFDAGVKLIGATTHFVTEELDSGP 275
Query: 221 IIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVVF 273
IIEQMVERVSHRDNLR+FVQKSED+EK+CL KAIKSYCELRVLPY +TVVF
Sbjct: 276 IIEQMVERVSHRDNLRSFVQKSEDLEKKCLMKAIKSYCELRVLPYGTQRTVVF 328
Score = 454 (164.9 bits), Expect = 6.2e-93, Sum P(2) = 6.2e-93
Identities = 82/128 (64%), Positives = 101/128 (78%)
Query: 7 EFIFDPIKWPREQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYG 66
EFIFDP+KWPR QMDEDF +++ F+A+ SVVRVP +DPKYK+A+L SKQ+HCLV+ L+
Sbjct: 91 EFIFDPVKWPRRQMDEDFQTIAQKFSALSSVVRVPSLDPKYKIALLLSKQDHCLVEMLHK 150
Query: 67 WQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYL-CAKXXXXXXXXXXXVQNTDF 125
WQ+GKLPV+ITCVISNH+R PN+HV+RFL+RHGI YHYL V+ TDF
Sbjct: 151 WQDGKLPVDITCVISNHERAPNTHVMRFLQRHGISYHYLPTTDQNKIEEEILELVKGTDF 210
Query: 126 LVLARYMQ 133
LVLARYMQ
Sbjct: 211 LVLARYMQ 218
>TIGR_CMR|CPS_2482 [details] [associations]
symbol:CPS_2482 "formyltetrahydrofolate deformylase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008864
"formyltetrahydrofolate deformylase activity" evidence=ISS]
[GO:0009152 "purine ribonucleotide biosynthetic process"
evidence=ISS] InterPro:IPR002376 InterPro:IPR004810 Pfam:PF00551
PIRSF:PIRSF036480 PRINTS:PR01575 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0016742 Gene3D:3.40.50.170
SUPFAM:SSF53328 GO:GO:0006189 eggNOG:COG0788 HOGENOM:HOG000033576
KO:K01433 GO:GO:0008864 TIGRFAMs:TIGR00655 RefSeq:YP_269198.1
RefSeq:YP_270694.1 ProteinModelPortal:Q47WX7 STRING:Q47WX7
GeneID:3519897 GeneID:3522061 KEGG:cps:CPS_2482 KEGG:cps:CPS_4036
PATRIC:21468033 OMA:THIITAD ProtClustDB:PRK13011
BioCyc:CPSY167879:GI48-2545-MONOMER
BioCyc:CPSY167879:GI48-4049-MONOMER Uniprot:Q47WX7
Length = 292
Score = 246 (91.7 bits), Expect = 5.6e-34, Sum P(2) = 5.6e-34
Identities = 49/113 (43%), Positives = 69/113 (61%)
Query: 161 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 220
+ +LS + INIHH LLP FKG +P QA+D G+KL+GAT+H+V+++LD GP
Sbjct: 179 YMQVLSSDLCQKLSGKAINIHHSLLPGFKGARPYFQAYDRGIKLVGATAHYVSDDLDEGP 238
Query: 221 IIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVVF 273
II Q VE V H + K D+E L++A++ + E R+ Y KTVVF
Sbjct: 239 IISQGVETVDHGYYPKDLAAKGRDIECLTLSRAVRCHIEHRIFMYG-KKTVVF 290
Score = 139 (54.0 bits), Expect = 5.6e-34, Sum P(2) = 5.6e-34
Identities = 36/93 (38%), Positives = 51/93 (54%)
Query: 46 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYL 105
K KV ++ SK +HCL D LY ++ G L +EI +ISNH P+ + + HGIPY++L
Sbjct: 94 KSKVVIMVSKHDHCLNDLLYRYRTGDLDIEIPAIISNH---PDLEELA--KWHGIPYYHL 148
Query: 106 -CAKXXXXXXXXXX--XVQNTD--FLVLARYMQ 133
K +Q +D +VLARYMQ
Sbjct: 149 PITKDTKPEQEAKVWQIIQESDADLVVLARYMQ 181
>TIGR_CMR|CPS_4036 [details] [associations]
symbol:CPS_4036 "formyltetrahydrofolate deformylase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008864
"formyltetrahydrofolate deformylase activity" evidence=ISS]
[GO:0009152 "purine ribonucleotide biosynthetic process"
evidence=ISS] InterPro:IPR002376 InterPro:IPR004810 Pfam:PF00551
PIRSF:PIRSF036480 PRINTS:PR01575 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0016742 Gene3D:3.40.50.170
SUPFAM:SSF53328 GO:GO:0006189 eggNOG:COG0788 HOGENOM:HOG000033576
KO:K01433 GO:GO:0008864 TIGRFAMs:TIGR00655 RefSeq:YP_269198.1
RefSeq:YP_270694.1 ProteinModelPortal:Q47WX7 STRING:Q47WX7
GeneID:3519897 GeneID:3522061 KEGG:cps:CPS_2482 KEGG:cps:CPS_4036
PATRIC:21468033 OMA:THIITAD ProtClustDB:PRK13011
BioCyc:CPSY167879:GI48-2545-MONOMER
BioCyc:CPSY167879:GI48-4049-MONOMER Uniprot:Q47WX7
Length = 292
Score = 246 (91.7 bits), Expect = 5.6e-34, Sum P(2) = 5.6e-34
Identities = 49/113 (43%), Positives = 69/113 (61%)
Query: 161 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 220
+ +LS + INIHH LLP FKG +P QA+D G+KL+GAT+H+V+++LD GP
Sbjct: 179 YMQVLSSDLCQKLSGKAINIHHSLLPGFKGARPYFQAYDRGIKLVGATAHYVSDDLDEGP 238
Query: 221 IIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVVF 273
II Q VE V H + K D+E L++A++ + E R+ Y KTVVF
Sbjct: 239 IISQGVETVDHGYYPKDLAAKGRDIECLTLSRAVRCHIEHRIFMYG-KKTVVF 290
Score = 139 (54.0 bits), Expect = 5.6e-34, Sum P(2) = 5.6e-34
Identities = 36/93 (38%), Positives = 51/93 (54%)
Query: 46 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYL 105
K KV ++ SK +HCL D LY ++ G L +EI +ISNH P+ + + HGIPY++L
Sbjct: 94 KSKVVIMVSKHDHCLNDLLYRYRTGDLDIEIPAIISNH---PDLEELA--KWHGIPYYHL 148
Query: 106 -CAKXXXXXXXXXX--XVQNTD--FLVLARYMQ 133
K +Q +D +VLARYMQ
Sbjct: 149 PITKDTKPEQEAKVWQIIQESDADLVVLARYMQ 181
>UNIPROTKB|G4MX54 [details] [associations]
symbol:MGG_08008 "Formyltetrahydrofolate deformylase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR002376 InterPro:IPR002912
InterPro:IPR004810 Pfam:PF00551 Pfam:PF01842 PIRSF:PIRSF036480
PRINTS:PR01575 GO:GO:0016597 GO:GO:0016742 Gene3D:3.40.50.170
SUPFAM:SSF53328 GO:GO:0043581 EMBL:CM001232 GO:GO:0006189 KO:K01433
GO:GO:0008864 TIGRFAMs:TIGR00655 RefSeq:XP_003714959.1
ProteinModelPortal:G4MX54 EnsemblFungi:MGG_08008T0 GeneID:2678241
KEGG:mgr:MGG_08008 Uniprot:G4MX54
Length = 284
Score = 253 (94.1 bits), Expect = 7.1e-34, Sum P(2) = 7.1e-34
Identities = 52/113 (46%), Positives = 68/113 (60%)
Query: 161 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 220
+ +LS + +INIHH LPSFKG KP QA+D GVK+IGAT+HFVT +LD GP
Sbjct: 172 YMQVLSPTLCEAMSGRIINIHHSFLPSFKGAKPYHQAYDRGVKIIGATAHFVTADLDEGP 231
Query: 221 IIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVVF 273
IIEQ + RV H + V + +E L A++ + E RV +KTVVF
Sbjct: 232 IIEQRISRVDHGMTPKQLVDEGSSIEALVLGAAVQWFAERRVF-LNNSKTVVF 283
Score = 131 (51.2 bits), Expect = 7.1e-34, Sum P(2) = 7.1e-34
Identities = 39/127 (30%), Positives = 62/127 (48%)
Query: 10 FDPIKWPREQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQE 69
F P+ + + DF L+ ++ M +R P + K +V ++ SK HCL D L+ Q
Sbjct: 54 FGPVAETAD-LSADFSALASQYDPMTWDIR-P-VAQKTRVLIMVSKIGHCLNDLLFRAQS 110
Query: 70 GKLPVEITCVISNH-DRGP--NSHVIRFLERHGIPYHYLCAKXXXXXXXXXXXVQNTDFL 126
G+L V++ ++SNH D P SH + F RH +P ++ + +
Sbjct: 111 GRLAVDVALIVSNHPDFAPLAASHGVEF--RH-LPVTKETKTQQEEEILKLAKERDVELI 167
Query: 127 VLARYMQ 133
VLARYMQ
Sbjct: 168 VLARYMQ 174
>TIGR_CMR|CPS_3620 [details] [associations]
symbol:CPS_3620 "formyltetrahydrofolate deformylase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008864
"formyltetrahydrofolate deformylase activity" evidence=ISS]
[GO:0009152 "purine ribonucleotide biosynthetic process"
evidence=ISS] InterPro:IPR002376 InterPro:IPR004810 Pfam:PF00551
PIRSF:PIRSF036480 PRINTS:PR01575 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0016742 Gene3D:3.40.50.170
SUPFAM:SSF53328 GO:GO:0006189 eggNOG:COG0788 HOGENOM:HOG000033576
KO:K01433 ProtClustDB:PRK06027 GO:GO:0008864 TIGRFAMs:TIGR00655
RefSeq:YP_270288.1 ProteinModelPortal:Q47Y32 STRING:Q47Y32
GeneID:3519679 KEGG:cps:CPS_3620 PATRIC:21470167 OMA:NAVRWHC
BioCyc:CPSY167879:GI48-3642-MONOMER Uniprot:Q47Y32
Length = 292
Score = 241 (89.9 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 48/113 (42%), Positives = 69/113 (61%)
Query: 161 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 220
+ +LS + INIHH LLP FKG +P QA+D G+KL+GAT+H+V+++LD GP
Sbjct: 179 YMQVLSSDMCKKLSGKAINIHHSLLPGFKGARPYYQAYDRGIKLVGATAHYVSDDLDEGP 238
Query: 221 IIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVVF 273
II Q VE V H + K D+E LA+A++ + E R+ + K+VVF
Sbjct: 239 IISQGVETVDHSYYPQDLAAKGRDIECLTLARAVRCHIEHRIFLHG-KKSVVF 290
Score = 133 (51.9 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 43/134 (32%), Positives = 65/134 (48%)
Query: 6 IEFIFDPI-KWPREQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFL 64
IEF D + R+ + F + + F + P K KV ++ SK +HCL D L
Sbjct: 56 IEFRADTATNFNRDDFCQQFGERASEFEMKWELASSPY---KSKVVIMVSKHDHCLNDLL 112
Query: 65 YGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYL-CAKXXX--XXXXXXXXVQ 121
Y ++ G L +EI +ISNH P+ + + H IPY++L K +Q
Sbjct: 113 YRYRTGDLNIEIPAIISNH---PDLEDLA--KWHDIPYYHLPITKETKPEQEAKVFQIIQ 167
Query: 122 NT--DFLVLARYMQ 133
++ D +VLARYMQ
Sbjct: 168 DSEADLVVLARYMQ 181
>TIGR_CMR|CJE_0881 [details] [associations]
symbol:CJE_0881 "formyltetrahydrofolate deformylase"
species:195099 "Campylobacter jejuni RM1221" [GO:0008864
"formyltetrahydrofolate deformylase activity" evidence=ISS]
[GO:0009152 "purine ribonucleotide biosynthetic process"
evidence=ISS] InterPro:IPR002376 InterPro:IPR004810 Pfam:PF00551
PIRSF:PIRSF036480 PRINTS:PR01575 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0016742 Gene3D:3.40.50.170
SUPFAM:SSF53328 GO:GO:0006189 eggNOG:COG0788 HOGENOM:HOG000033576
KO:K01433 OMA:HYPNQVI ProtClustDB:PRK06027 GO:GO:0008864
PANTHER:PTHR10520:SF7 TIGRFAMs:TIGR00655 RefSeq:YP_178883.1
ProteinModelPortal:Q5HV02 STRING:Q5HV02 GeneID:3231394
KEGG:cjr:CJE0881 PATRIC:20043529 BioCyc:CJEJ195099:GJC0-901-MONOMER
Uniprot:Q5HV02
Length = 274
Score = 252 (93.8 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 52/110 (47%), Positives = 68/110 (61%)
Query: 164 ILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIE 223
ILS F+R + +INIHH LP+F G P KQAF+ GVK+IGAT+HFV LD GPII
Sbjct: 166 ILSPDFVRHFEGKIINIHHSFLPAFIGANPYKQAFERGVKIIGATAHFVNNNLDEGPIIT 225
Query: 224 QMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVVF 273
Q V V+H + Q ++EK L+KA+ E R+ Y NKT++F
Sbjct: 226 QAVSPVNHEFTWQDMQQAGRNIEKDVLSKALDLAFEDRIFIYN-NKTIIF 274
Score = 110 (43.8 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 31/93 (33%), Positives = 46/93 (49%)
Query: 46 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYL 105
K + V A+K+ HCL D L +L I VISNH NS + +E+ IPYH++
Sbjct: 78 KKDIVVFATKESHCLGDLLIKHYSNELEANIKAVISNH----NS-LKDLVEKFEIPYHFI 132
Query: 106 CAKXXXXXXXXXXXVQ-----NTDFLVLARYMQ 133
A+ ++ D+LVLA+YM+
Sbjct: 133 SAENLDRKEQENQILKCLEQYKFDYLVLAKYMR 165
>ASPGD|ASPL0000054518 [details] [associations]
symbol:AN0495 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0016742
"hydroxymethyl-, formyl- and related transferase activity"
evidence=IEA] [GO:0016597 "amino acid binding" evidence=IEA]
[GO:0006189 "'de novo' IMP biosynthetic process" evidence=IEA]
[GO:0008864 "formyltetrahydrofolate deformylase activity"
evidence=IEA] InterPro:IPR002376 InterPro:IPR002912
InterPro:IPR004810 Pfam:PF00551 Pfam:PF01842 PIRSF:PIRSF036480
PRINTS:PR01575 EMBL:BN001308 GO:GO:0016597 EMBL:AACD01000007
GO:GO:0016742 Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0006189
eggNOG:COG0788 HOGENOM:HOG000033576 KO:K01433 OMA:HYPNQVI
GO:GO:0008864 TIGRFAMs:TIGR00655 RefSeq:XP_658099.1
ProteinModelPortal:Q5BG35 STRING:Q5BG35
EnsemblFungi:CADANIAT00002194 GeneID:2876272 KEGG:ani:AN0495.2
OrthoDB:EOG44BFB5 Uniprot:Q5BG35
Length = 289
Score = 265 (98.3 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
Identities = 56/113 (49%), Positives = 71/113 (62%)
Query: 161 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 220
+ +LS + +INIHH LPSFKG KP QA+D GVKL+GAT+HFVT +LD GP
Sbjct: 177 YMQVLSPTLCDAMSGKIINIHHSFLPSFKGAKPYHQAYDRGVKLVGATAHFVTSDLDEGP 236
Query: 221 IIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVVF 273
IIEQ V RV+H + + +VE LA A+K + E RVL +KTVVF
Sbjct: 237 IIEQNVVRVNHALSPKELTHAGSNVESNVLAAAVKYFAERRVL-LNGHKTVVF 288
Score = 94 (38.1 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 46 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYL 105
K +V ++ SK HCL D L+ G+L +E+ ++SNH P+ + + +P+ +L
Sbjct: 92 KPRVLIMVSKIGHCLNDLLFRQSTGQLAIEVPLIVSNH---PDFETLA--ATYKVPFMHL 146
Query: 106 CAKXXXXXXXXXXXVQ-----NTDFLVLARYMQ 133
++ + + +VLARYMQ
Sbjct: 147 PVTADTKQQQETRILELIKEYDIELVVLARYMQ 179
>UNIPROTKB|Q9KQK6 [details] [associations]
symbol:VC_1992 "Formyltetrahydrofolate deformylase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008864 "formyltetrahydrofolate deformylase activity"
evidence=ISS] [GO:0009152 "purine ribonucleotide biosynthetic
process" evidence=ISS] InterPro:IPR002376 InterPro:IPR002912
InterPro:IPR004810 Pfam:PF00551 Pfam:PF01842 PIRSF:PIRSF036480
PRINTS:PR01575 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0016597 GO:GO:0016742 Gene3D:3.40.50.170 SUPFAM:SSF53328
GO:GO:0006189 GO:GO:0009152 HSSP:P08179 KO:K01433
ProtClustDB:PRK06027 GO:GO:0008864 PANTHER:PTHR10520:SF7
TIGRFAMs:TIGR00655 PIR:F82130 RefSeq:NP_231626.1
ProteinModelPortal:Q9KQK6 DNASU:2613496 GeneID:2613496
KEGG:vch:VC1992 PATRIC:20083018 OMA:FILASHE Uniprot:Q9KQK6
Length = 277
Score = 244 (91.0 bits), Expect = 7.7e-31, Sum P(2) = 7.7e-31
Identities = 50/109 (45%), Positives = 68/109 (62%)
Query: 164 ILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIE 223
+L+ F+ + +INIHH LP+F G KP +QA++ GVK+IGAT+HFVT +LD GPII+
Sbjct: 169 VLTPAFVERFHHKIINIHHSFLPAFIGAKPYQQAYERGVKIIGATAHFVTNDLDEGPIIK 228
Query: 224 QMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVV 272
Q V V H + + Q DVEK L+KA+ V Y NKTV+
Sbjct: 229 QDVIPVDHTFSAQDMAQAGRDVEKNVLSKALNKVLNDHVFVYG-NKTVI 276
Score = 111 (44.1 bits), Expect = 7.7e-31, Sum P(2) = 7.7e-31
Identities = 28/91 (30%), Positives = 44/91 (48%)
Query: 48 KVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCA 107
++ +L +K+ HCL D L +G L V+I V+ N+D + R ER IPYH +
Sbjct: 83 RIVILVTKEAHCLGDILMKNYDGSLDVDIAAVVGNYDT-----LQRLTERFDIPYHCVSH 137
Query: 108 KXXXXXXXXXXXVQ-----NTDFLVLARYMQ 133
+ + D+LVLA+YM+
Sbjct: 138 EGLSREAHEQALLDVIDQYQPDYLVLAKYMR 168
>TIGR_CMR|VC_1992 [details] [associations]
symbol:VC_1992 "formyltetrahydrofolate deformylase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008864
"formyltetrahydrofolate deformylase activity" evidence=ISS]
[GO:0009152 "purine ribonucleotide biosynthetic process"
evidence=ISS] InterPro:IPR002376 InterPro:IPR002912
InterPro:IPR004810 Pfam:PF00551 Pfam:PF01842 PIRSF:PIRSF036480
PRINTS:PR01575 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0016597 GO:GO:0016742 Gene3D:3.40.50.170 SUPFAM:SSF53328
GO:GO:0006189 GO:GO:0009152 HSSP:P08179 KO:K01433
ProtClustDB:PRK06027 GO:GO:0008864 PANTHER:PTHR10520:SF7
TIGRFAMs:TIGR00655 PIR:F82130 RefSeq:NP_231626.1
ProteinModelPortal:Q9KQK6 DNASU:2613496 GeneID:2613496
KEGG:vch:VC1992 PATRIC:20083018 OMA:FILASHE Uniprot:Q9KQK6
Length = 277
Score = 244 (91.0 bits), Expect = 7.7e-31, Sum P(2) = 7.7e-31
Identities = 50/109 (45%), Positives = 68/109 (62%)
Query: 164 ILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIE 223
+L+ F+ + +INIHH LP+F G KP +QA++ GVK+IGAT+HFVT +LD GPII+
Sbjct: 169 VLTPAFVERFHHKIINIHHSFLPAFIGAKPYQQAYERGVKIIGATAHFVTNDLDEGPIIK 228
Query: 224 QMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVV 272
Q V V H + + Q DVEK L+KA+ V Y NKTV+
Sbjct: 229 QDVIPVDHTFSAQDMAQAGRDVEKNVLSKALNKVLNDHVFVYG-NKTVI 276
Score = 111 (44.1 bits), Expect = 7.7e-31, Sum P(2) = 7.7e-31
Identities = 28/91 (30%), Positives = 44/91 (48%)
Query: 48 KVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCA 107
++ +L +K+ HCL D L +G L V+I V+ N+D + R ER IPYH +
Sbjct: 83 RIVILVTKEAHCLGDILMKNYDGSLDVDIAAVVGNYDT-----LQRLTERFDIPYHCVSH 137
Query: 108 KXXXXXXXXXXXVQ-----NTDFLVLARYMQ 133
+ + D+LVLA+YM+
Sbjct: 138 EGLSREAHEQALLDVIDQYQPDYLVLAKYMR 168
>TIGR_CMR|DET_1237 [details] [associations]
symbol:DET_1237 "formyltetrahydrofolate deformylase"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0008864
"formyltetrahydrofolate deformylase activity" evidence=ISS]
[GO:0009152 "purine ribonucleotide biosynthetic process"
evidence=ISS] InterPro:IPR002376 InterPro:IPR004810 Pfam:PF00551
PIRSF:PIRSF036480 PRINTS:PR01575 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0016742 Gene3D:3.40.50.170
SUPFAM:SSF53328 GO:GO:0006189 eggNOG:COG0788 HOGENOM:HOG000033576
KO:K01433 GO:GO:0008864 PANTHER:PTHR10520:SF7 TIGRFAMs:TIGR00655
RefSeq:YP_181950.1 ProteinModelPortal:Q3Z749 STRING:Q3Z749
GeneID:3229480 KEGG:det:DET1237 PATRIC:21609505 OMA:ISSFICR
ProtClustDB:CLSK837055 BioCyc:DETH243164:GJNF-1238-MONOMER
Uniprot:Q3Z749
Length = 284
Score = 241 (89.9 bits), Expect = 3.3e-30, Sum P(2) = 3.3e-30
Identities = 44/112 (39%), Positives = 71/112 (63%)
Query: 161 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 220
+ +LS +F+ + +INIHH LP+F+G +P QA + GVKL+GAT+HFV LD GP
Sbjct: 173 YMQVLSPEFVARFENRIINIHHSFLPAFEGARPYHQAIERGVKLVGATAHFVNNNLDKGP 232
Query: 221 IIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVV 272
II Q +SH D++ + K D+EK L++A+K + + + + N+T++
Sbjct: 233 IICQSTMPISHEDSVEDLMVKGRDIEKLVLSQAMKVFLDHHIFVHN-NRTII 283
Score = 108 (43.1 bits), Expect = 3.3e-30, Sum P(2) = 3.3e-30
Identities = 37/135 (27%), Positives = 60/135 (44%)
Query: 4 MCIEFIFDPIKWPREQMDEDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDF 63
M +E+ REQM+ + + + + ++ D K ++AV SK +HCL D
Sbjct: 47 MRLEWDISAFALSREQMEAEIALMGQEY-CYADNWQIFYSDRKPRLAVFVSKYDHCLWDI 105
Query: 64 LYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAKXXXXXXXXXXXV--- 120
+ ++ G+L +I +ISNH PN + L GI Y +
Sbjct: 106 MLRYKAGELKCDIPLIISNH---PNLKPVADL--FGIDYKVVKVTPDNKLEAENEQTCLI 160
Query: 121 --QNTDFLVLARYMQ 133
+ DF++LARYMQ
Sbjct: 161 NEYSIDFMILARYMQ 175
>TIGR_CMR|CPS_4357 [details] [associations]
symbol:CPS_4357 "formyltetrahydrofolate deformylase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008864
"formyltetrahydrofolate deformylase activity" evidence=ISS]
[GO:0009152 "purine ribonucleotide biosynthetic process"
evidence=ISS] InterPro:IPR002376 InterPro:IPR004810 Pfam:PF00551
PIRSF:PIRSF036480 PRINTS:PR01575 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0016742 Gene3D:3.40.50.170
SUPFAM:SSF53328 GO:GO:0006189 eggNOG:COG0788 HOGENOM:HOG000033576
KO:K01433 GO:GO:0008864 TIGRFAMs:TIGR00655 RefSeq:YP_271006.1
ProteinModelPortal:Q47W16 STRING:Q47W16 DNASU:3521955
GeneID:3521955 KEGG:cps:CPS_4357 PATRIC:21471559 OMA:AFEERVI
BioCyc:CPSY167879:GI48-4366-MONOMER Uniprot:Q47W16
Length = 286
Score = 218 (81.8 bits), Expect = 5.3e-30, Sum P(2) = 5.3e-30
Identities = 47/112 (41%), Positives = 64/112 (57%)
Query: 161 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 220
+ ILS + INIHH LPSFKG +P QA GVK+IGAT+H+VT LD GP
Sbjct: 174 YMQILSDGLCQQLQGKAINIHHSFLPSFKGARPYHQAHARGVKVIGATAHYVTANLDEGP 233
Query: 221 IIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVV 272
II Q V+ ++H + V D+E L+ A++ + E RV +KTV+
Sbjct: 234 IIAQEVKPINHAFTIEQMVHMGHDLEATALSHAVRIHAEQRVC-INGDKTVI 284
Score = 129 (50.5 bits), Expect = 5.3e-30, Sum P(2) = 5.3e-30
Identities = 32/90 (35%), Positives = 41/90 (45%)
Query: 49 VAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCAK 108
V + SK +HCLV L W+ G LP+ I VISNH + E H +P+++L
Sbjct: 92 VLIAVSKDDHCLVSLLTKWRSGALPINIVGVISNHQ-----YCQALSEWHNVPFYHLPVN 146
Query: 109 XXXXXXXXXXXVQ-----NTDFLVLARYMQ 133
N D LVLARYMQ
Sbjct: 147 AETKLEQEAQITDLMEELNIDLLVLARYMQ 176
>TIGR_CMR|SO_1624 [details] [associations]
symbol:SO_1624 "formyltetrahydrofolate deformylase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008864
"formyltetrahydrofolate deformylase activity" evidence=ISS]
[GO:0009152 "purine ribonucleotide biosynthetic process"
evidence=ISS] InterPro:IPR002376 InterPro:IPR002912
InterPro:IPR004810 Pfam:PF00551 Pfam:PF01842 PIRSF:PIRSF036480
PRINTS:PR01575 GO:GO:0016597 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0016742 Gene3D:3.40.50.170
SUPFAM:SSF53328 GO:GO:0006189 HSSP:P22102 HOGENOM:HOG000033576
KO:K01433 ProtClustDB:PRK06027 GO:GO:0008864 PANTHER:PTHR10520:SF7
TIGRFAMs:TIGR00655 RefSeq:NP_717235.2 ProteinModelPortal:Q8EGI0
DNASU:1169419 GeneID:1169419 KEGG:son:SO_1624 PATRIC:23522882
OMA:SHYVTND Uniprot:Q8EGI0
Length = 291
Score = 229 (85.7 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
Identities = 48/110 (43%), Positives = 68/110 (61%)
Query: 164 ILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIE 223
+L+ F+ Y ++NIHH LP+F G P +QA++ GVK+IGAT+HFV LD GPII+
Sbjct: 183 VLTPDFVAEYPNRILNIHHSFLPAFIGAAPYRQAWERGVKIIGATAHFVNNCLDEGPIIK 242
Query: 224 QMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVVF 273
Q V V H + + DVEK L+KA++ +V+ Y NKT+VF
Sbjct: 243 QDVIPVDHSYSALEMAKAGRDVEKSVLSKALQLVLNEQVVVYG-NKTIVF 291
Score = 109 (43.4 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
Identities = 31/94 (32%), Positives = 47/94 (50%)
Query: 46 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFL-ERHGIPYHY 104
K ++ +L +K+ HCL D L G L VEI V+ NHD V+R L E+ IP+H
Sbjct: 95 KKRIVILVTKEAHCLGDLLMKAYYGGLNVEIAAVVGNHD------VLRELVEKFDIPFHL 148
Query: 105 LCAKXXXXXXXXXXXVQ-----NTDFLVLARYMQ 133
+ + + + D+LVLA+YM+
Sbjct: 149 VSHEGLDRIQHEQALLAAVSQYSPDYLVLAKYMR 182
>UNIPROTKB|P37051 [details] [associations]
symbol:purU "formyltetrahydrofolate deformylase"
species:83333 "Escherichia coli K-12" [GO:0016742 "hydroxymethyl-,
formyl- and related transferase activity" evidence=IEA] [GO:0016597
"amino acid binding" evidence=IEA] [GO:0006189 "'de novo' IMP
biosynthetic process" evidence=IEA] [GO:0006730 "one-carbon
metabolic process" evidence=IEA;TAS] [GO:0008864
"formyltetrahydrofolate deformylase activity" evidence=IEA;IDA]
[GO:0009257 "10-formyltetrahydrofolate biosynthetic process"
evidence=TAS] [GO:0009152 "purine ribonucleotide biosynthetic
process" evidence=IDA] InterPro:IPR002376 InterPro:IPR002912
InterPro:IPR004810 Pfam:PF00551 Pfam:PF01842 PIRSF:PIRSF036480
PRINTS:PR01575 UniPathway:UPA00074 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0016597
GO:GO:0016742 GO:GO:0006730 Gene3D:3.40.50.170 SUPFAM:SSF53328
GO:GO:0006189 GO:GO:0009257 GO:GO:0009152 EMBL:M64675 EMBL:L20251
PIR:C36871 RefSeq:NP_415748.1 RefSeq:YP_489500.1
ProteinModelPortal:P37051 SMR:P37051 IntAct:P37051 PaxDb:P37051
PRIDE:P37051 DNASU:945827 EnsemblBacteria:EBESCT00000000642
EnsemblBacteria:EBESCT00000017337 GeneID:12932930 GeneID:945827
KEGG:ecj:Y75_p1205 KEGG:eco:b1232 PATRIC:32117720 EchoBASE:EB1766
EcoGene:EG11819 eggNOG:COG0788 HOGENOM:HOG000033576 KO:K01433
OMA:HYPNQVI ProtClustDB:PRK06027
BioCyc:EcoCyc:FORMYLTHFDEFORMYL-MONOMER
BioCyc:ECOL316407:JW1220-MONOMER
BioCyc:MetaCyc:FORMYLTHFDEFORMYL-MONOMER Genevestigator:P37051
GO:GO:0008864 PANTHER:PTHR10520:SF7 TIGRFAMs:TIGR00655
Uniprot:P37051
Length = 280
Score = 224 (83.9 bits), Expect = 5.2e-28, Sum P(2) = 5.2e-28
Identities = 44/109 (40%), Positives = 66/109 (60%)
Query: 164 ILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIE 223
+L+ +F+ + +INIHH LP+F G +P QA++ GVK+IGAT+H+V + LD GPII
Sbjct: 172 VLTPEFVARFPNKIINIHHSFLPAFIGARPYHQAYERGVKIIGATAHYVNDNLDEGPIIM 231
Query: 224 QMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVV 272
Q V V H ++ DVEK L++A+ RV Y N+T++
Sbjct: 232 QDVIHVDHTYTAEDMMRAGRDVEKNVLSRALYKVLAQRVFVYG-NRTII 279
Score = 104 (41.7 bits), Expect = 5.2e-28, Sum P(2) = 5.2e-28
Identities = 30/97 (30%), Positives = 46/97 (47%)
Query: 40 VPDIDP--KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRF-LE 96
V +++P + ++ +L +K+ HCL D L G L VEI VI NHD S V RF +
Sbjct: 76 VRELNPAGRRRIVILVTKEAHCLGDLLMKANYGGLDVEIAAVIGNHDT-LRSLVERFDIP 134
Query: 97 RHGIPYHYLCAKXXXXXXXXXXXVQNTDFLVLARYMQ 133
+ + L D++VLA+YM+
Sbjct: 135 FELVSHEGLTRNEHDQKMADAIDAYQPDYVVLAKYMR 171
>TIGR_CMR|APH_0230 [details] [associations]
symbol:APH_0230 "phosphoribosylglycinamide
formyltransferase" species:212042 "Anaplasma phagocytophilum HZ"
[GO:0004644 "phosphoribosylglycinamide formyltransferase activity"
evidence=ISS] [GO:0009152 "purine ribonucleotide biosynthetic
process" evidence=ISS] InterPro:IPR002376 InterPro:IPR004607
Pfam:PF00551 EMBL:CP000235 GenomeReviews:CP000235_GR
Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0006189 GO:GO:0004644
TIGRFAMs:TIGR00639 eggNOG:COG0299 HOGENOM:HOG000033575 OMA:SNFEAIA
KO:K11175 RefSeq:YP_504847.1 PDB:3KCQ PDBsum:3KCQ
ProteinModelPortal:Q2GLA4 STRING:Q2GLA4 GeneID:3931307
KEGG:aph:APH_0230 PATRIC:20949040 ProtClustDB:CLSK747381
BioCyc:APHA212042:GHPM-262-MONOMER EvolutionaryTrace:Q2GLA4
Uniprot:Q2GLA4
Length = 211
Score = 189 (71.6 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 41/95 (43%), Positives = 52/95 (54%)
Query: 161 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 220
F IL KF+ + +INIH LLPSFKG +QA+ AGVK+ G T H+V +ELDAGP
Sbjct: 87 FMSILPEKFVTDWHHKIINIHPSLLPSFKGLNAQEQAYKAGVKIAGCTLHYVYQELDAGP 146
Query: 221 IIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIK 255
II Q V D + + E C K +K
Sbjct: 147 IIMQAAVPVLREDTAESLASRILAAEHVCYPKGVK 181
Score = 45 (20.9 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 21/90 (23%), Positives = 37/90 (41%)
Query: 48 KVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCA 107
+V VL S + L + + V I+CVISN+ + + + +GIP +
Sbjct: 6 RVGVLISGRGSNLEALAKAFSTEESSVVISCVISNN---AEARGLLIAQSYGIPTFVVKR 62
Query: 108 KXXXXXXXXXXXVQN-TDFLVLARYMQPVP 136
K ++ D + LA +M +P
Sbjct: 63 KPLDIEHISTVLREHDVDLVCLAGFMSILP 92
>TIGR_CMR|ECH_0370 [details] [associations]
symbol:ECH_0370 "phosphoribosylglycinamide
formyltransferase" species:205920 "Ehrlichia chaffeensis str.
Arkansas" [GO:0004644 "phosphoribosylglycinamide formyltransferase
activity" evidence=ISS] [GO:0009152 "purine ribonucleotide
biosynthetic process" evidence=ISS] InterPro:IPR002376
InterPro:IPR004607 Pfam:PF00551 EMBL:CP000236
GenomeReviews:CP000236_GR Gene3D:3.40.50.170 SUPFAM:SSF53328
GO:GO:0006189 GO:GO:0004644 TIGRFAMs:TIGR00639 eggNOG:COG0299
HOGENOM:HOG000033575 OMA:SNFEAIA KO:K11175 RefSeq:YP_507190.1
ProteinModelPortal:Q2GH93 STRING:Q2GH93 GeneID:3927226
KEGG:ech:ECH_0370 PATRIC:20576229 ProtClustDB:CLSK749171
BioCyc:ECHA205920:GJNR-371-MONOMER Uniprot:Q2GH93
Length = 208
Score = 177 (67.4 bits), Expect = 4.3e-18, Sum P(2) = 4.3e-18
Identities = 40/95 (42%), Positives = 51/95 (53%)
Query: 161 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 220
F I+ F+ + +INIH LLPSFKG QA AGVK+ G T H+V E+D GP
Sbjct: 86 FMSIVPEGFINKWFHKIINIHPSLLPSFKGLNAQSQALKAGVKIAGCTVHYVYPEVDGGP 145
Query: 221 IIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIK 255
II Q V DNL ++ +E C KA+K
Sbjct: 146 IIVQAAVPVFSSDNLTDLSERILKMEHICYPKAVK 180
Score = 56 (24.8 bits), Expect = 4.3e-18, Sum P(2) = 4.3e-18
Identities = 19/90 (21%), Positives = 38/90 (42%)
Query: 48 KVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCA 107
K+ +L S + + + + P E++CVISN+ P ++ + ++ I +
Sbjct: 5 KLGILISGRGSNMQALINACAQDDFPAEVSCVISNN---PKANGLLIAQKQNIKTFVVQG 61
Query: 108 KXXXXXXXXXXXVQN-TDFLVLARYMQPVP 136
+ Q+ D + LA +M VP
Sbjct: 62 RPLDFDSIDSILRQHQVDLICLAGFMSIVP 91
>TIGR_CMR|CHY_1077 [details] [associations]
symbol:CHY_1077 "phosphoribosylglycinamide
formyltransferase" species:246194 "Carboxydothermus
hydrogenoformans Z-2901" [GO:0004644 "phosphoribosylglycinamide
formyltransferase activity" evidence=ISS] [GO:0009152 "purine
ribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR001555 InterPro:IPR002376 InterPro:IPR004607
Pfam:PF00551 PROSITE:PS00373 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008168 GO:GO:0032259
Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0006189 GO:GO:0004644
TIGRFAMs:TIGR00639 eggNOG:COG0299 HOGENOM:HOG000033575 OMA:SNFEAIA
KO:K11175 RefSeq:YP_359923.1 ProteinModelPortal:Q3AD61
STRING:Q3AD61 GeneID:3728186 KEGG:chy:CHY_1077 PATRIC:21275289
ProtClustDB:CLSK2396896 BioCyc:CHYD246194:GJCN-1076-MONOMER
Uniprot:Q3AD61
Length = 209
Score = 169 (64.5 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
Identities = 42/102 (41%), Positives = 57/102 (55%)
Query: 163 MILSGK-FLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPI 221
M L GK L S+ +INIH LLP+F G KQA D GVK+ G T HFV E +D GPI
Sbjct: 90 MRLIGKPLLSSFPMRIINIHPALLPAFPGLHAQKQALDYGVKIAGCTVHFVDEGMDTGPI 149
Query: 222 IEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVL 263
I Q V D+ + ++ + E + L +A++ E R+L
Sbjct: 150 ILQAAVPVYDDDSEESLSERILEQEHRILVEALRLLSENRLL 191
Score = 63 (27.2 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 49 VAVLASKQE---HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYL 105
+ VLAS + ++D + W G LP +I +++++ P ++ I R GIP+HY
Sbjct: 4 LGVLASGRGSNFQAIIDAI-AW--GVLPAKIKVLVTDN---PEAYAIERARRAGIPWHYF 57
Query: 106 CAK 108
K
Sbjct: 58 DPK 60
>UNIPROTKB|A0A547 [details] [associations]
symbol:GART "Glycinamide ribonucleotide
synthetase-aminoimidazole ribonucleotide synthetase-glycinamide
ribonucleotide transformylase" species:9031 "Gallus gallus"
[GO:0004637 "phosphoribosylamine-glycine ligase activity"
evidence=IEA] [GO:0004641 "phosphoribosylformylglycinamidine
cyclo-ligase activity" evidence=IEA] [GO:0004644
"phosphoribosylglycinamide formyltransferase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006189 "'de novo' IMP biosynthetic
process" evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0009113 "purine nucleobase biosynthetic process"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
HAMAP:MF_00138 InterPro:IPR000115 InterPro:IPR000728
InterPro:IPR001555 InterPro:IPR002376 InterPro:IPR004607
InterPro:IPR004733 InterPro:IPR011761 InterPro:IPR013815
InterPro:IPR013816 InterPro:IPR016188 InterPro:IPR020559
InterPro:IPR020560 InterPro:IPR020562 Pfam:PF00551 Pfam:PF00586
Pfam:PF02843 Pfam:PF02844 PROSITE:PS00184 PROSITE:PS00373
PROSITE:PS50975 InterPro:IPR016185 Pfam:PF01071 GO:GO:0005524
GO:GO:0005737 GO:GO:0046872 Gene3D:3.30.1490.20 Gene3D:3.30.470.20
Gene3D:3.40.50.20 InterPro:IPR011054 SUPFAM:SSF52440
SUPFAM:SSF51246 GO:GO:0008168 GO:GO:0032259 Gene3D:3.40.50.170
SUPFAM:SSF53328 GO:GO:0006189 GO:GO:0009113 InterPro:IPR010918
Pfam:PF02769 SUPFAM:SSF56042 SUPFAM:SSF55326 GO:GO:0004637
Gene3D:3.90.600.10 InterPro:IPR020561 TIGRFAMs:TIGR00877
GeneTree:ENSGT00390000000292 HOVERGEN:HBG008333 GO:GO:0004641
GO:GO:0004644 TIGRFAMs:TIGR00878 TIGRFAMs:TIGR00639 IPI:IPI00823188
UniGene:Gga.4704 HAMAP:MF_00741_B EMBL:AADN02010771 EMBL:DQ078254
SMR:A0A547 STRING:A0A547 Ensembl:ENSGALT00000036762 Uniprot:A0A547
Length = 1003
Score = 182 (69.1 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 38/95 (40%), Positives = 55/95 (57%)
Query: 161 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 220
F ILSG F++ + ++NIH LLPSFKG K +AGV++ G T HFV EE+DAG
Sbjct: 891 FMRILSGPFVKKWEGKILNIHPSLLPSFKGANAHKLVLEAGVRVTGCTVHFVAEEVDAGA 950
Query: 221 IIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIK 255
II Q V D + T ++ ++ E + A++
Sbjct: 951 IIFQEAVPVKIGDTVETLSERVKEAEHRAFPAALQ 985
Score = 44 (20.5 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 20/56 (35%), Positives = 25/56 (44%)
Query: 46 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 101
K KVAVL S L + ++ EI V+SN G +R ER GIP
Sbjct: 803 KVKVAVLISGTGTNLEALINSTKKPTSFAEIVLVVSNK-AGVEG--LRKAERAGIP 855
Score = 42 (19.8 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 7/8 (87%), Positives = 8/8 (100%)
Query: 94 FLERHGIP 101
FL+RHGIP
Sbjct: 113 FLDRHGIP 120
>UNIPROTKB|P21872 [details] [associations]
symbol:GART "Trifunctional purine biosynthetic protein
adenosine-3" species:9031 "Gallus gallus" [GO:0009113 "purine
nucleobase biosynthetic process" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0004637 "phosphoribosylamine-glycine ligase
activity" evidence=IEA] [GO:0004641
"phosphoribosylformylglycinamidine cyclo-ligase activity"
evidence=IEA] [GO:0004644 "phosphoribosylglycinamide
formyltransferase activity" evidence=IEA] [GO:0006189 "'de novo'
IMP biosynthetic process" evidence=IEA;TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006144 "purine nucleobase metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0055086 "nucleobase-containing small molecule
metabolic process" evidence=TAS] Reactome:REACT_115655
InterPro:IPR000115 InterPro:IPR000728 InterPro:IPR001555
InterPro:IPR002376 InterPro:IPR004607 InterPro:IPR004733
InterPro:IPR011761 InterPro:IPR013815 InterPro:IPR013816
InterPro:IPR016188 InterPro:IPR020559 InterPro:IPR020560
InterPro:IPR020562 Pfam:PF00551 Pfam:PF00586 Pfam:PF02843
Pfam:PF02844 PROSITE:PS00184 PROSITE:PS00373 PROSITE:PS50975
UniPathway:UPA00074 InterPro:IPR016185 Pfam:PF01071 GO:GO:0005829
GO:GO:0005524 GO:GO:0046872 GO:GO:0006144 Gene3D:3.30.1490.20
Gene3D:3.30.470.20 Gene3D:3.40.50.20 InterPro:IPR011054
SUPFAM:SSF52440 SUPFAM:SSF51246 GO:GO:0008168 GO:GO:0032259
Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0006189 GO:GO:0009113
InterPro:IPR010918 Pfam:PF02769 SUPFAM:SSF56042 SUPFAM:SSF55326
eggNOG:COG0151 GO:GO:0004637 Gene3D:3.90.600.10 InterPro:IPR020561
TIGRFAMs:TIGR00877 CTD:2618 HOGENOM:HOG000030315 HOVERGEN:HBG008333
KO:K11787 OrthoDB:EOG4FFD13 GO:GO:0004641 GO:GO:0004644
TIGRFAMs:TIGR00878 TIGRFAMs:TIGR00639 EMBL:X56339 EMBL:X54200
IPI:IPI00576778 IPI:IPI00823188 PIR:S12617 RefSeq:NP_001001469.1
UniGene:Gga.4704 ProteinModelPortal:P21872 SMR:P21872 STRING:P21872
GeneID:395315 KEGG:gga:395315 NextBio:20815400 Uniprot:P21872
Length = 1003
Score = 182 (69.1 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 38/95 (40%), Positives = 55/95 (57%)
Query: 161 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 220
F ILSG F++ + ++NIH LLPSFKG K +AGV++ G T HFV EE+DAG
Sbjct: 891 FMRILSGPFVKKWEGKILNIHPSLLPSFKGANAHKLVLEAGVRVTGCTVHFVAEEVDAGA 950
Query: 221 IIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIK 255
II Q V D + T ++ ++ E + A++
Sbjct: 951 IIFQEAVPVKIGDTVETLSERVKEAEHRAFPAALQ 985
Score = 44 (20.5 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 20/56 (35%), Positives = 25/56 (44%)
Query: 46 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 101
K KVAVL S L + ++ EI V+SN G +R ER GIP
Sbjct: 803 KVKVAVLISGTGTNLEALINSTKKPTSFAEIVLVVSNK-AGVEG--LRKAERAGIP 855
Score = 42 (19.8 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 7/8 (87%), Positives = 8/8 (100%)
Query: 94 FLERHGIP 101
FL+RHGIP
Sbjct: 113 FLDRHGIP 120
>UNIPROTKB|F1P3N9 [details] [associations]
symbol:GART "Trifunctional purine biosynthetic protein
adenosine-3" species:9031 "Gallus gallus" [GO:0004637
"phosphoribosylamine-glycine ligase activity" evidence=IEA]
[GO:0004641 "phosphoribosylformylglycinamidine cyclo-ligase
activity" evidence=IEA] [GO:0004644 "phosphoribosylglycinamide
formyltransferase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006189
"'de novo' IMP biosynthetic process" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0009113 "purine
nucleobase biosynthetic process" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] HAMAP:MF_00138 InterPro:IPR000115
InterPro:IPR000728 InterPro:IPR001555 InterPro:IPR002376
InterPro:IPR004607 InterPro:IPR004733 InterPro:IPR011761
InterPro:IPR013815 InterPro:IPR013816 InterPro:IPR016188
InterPro:IPR020559 InterPro:IPR020560 InterPro:IPR020562
Pfam:PF00551 Pfam:PF00586 Pfam:PF02843 Pfam:PF02844 PROSITE:PS00184
PROSITE:PS00373 PROSITE:PS50975 InterPro:IPR016185 Pfam:PF01071
GO:GO:0005524 GO:GO:0005737 GO:GO:0046872 Gene3D:3.30.1490.20
Gene3D:3.30.470.20 Gene3D:3.40.50.20 InterPro:IPR011054
SUPFAM:SSF52440 SUPFAM:SSF51246 GO:GO:0008168 GO:GO:0032259
Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0006189 GO:GO:0009113
InterPro:IPR010918 Pfam:PF02769 SUPFAM:SSF56042 SUPFAM:SSF55326
GO:GO:0004637 Gene3D:3.90.600.10 InterPro:IPR020561
TIGRFAMs:TIGR00877 GeneTree:ENSGT00390000000292 OMA:GETSEMP
GO:GO:0004641 GO:GO:0004644 TIGRFAMs:TIGR00878 TIGRFAMs:TIGR00639
HAMAP:MF_00741_B EMBL:AADN02010771 IPI:IPI00588417
Ensembl:ENSGALT00000025758 ArrayExpress:F1P3N9 Uniprot:F1P3N9
Length = 1005
Score = 182 (69.1 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 38/95 (40%), Positives = 55/95 (57%)
Query: 161 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 220
F ILSG F++ + ++NIH LLPSFKG K +AGV++ G T HFV EE+DAG
Sbjct: 893 FMRILSGPFVKKWEGKILNIHPSLLPSFKGANAHKLVLEAGVRVTGCTVHFVAEEVDAGA 952
Query: 221 IIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIK 255
II Q V D + T ++ ++ E + A++
Sbjct: 953 IIFQEAVPVKIGDTVETLSERVKEAEHRAFPAALQ 987
Score = 44 (20.5 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 20/56 (35%), Positives = 25/56 (44%)
Query: 46 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 101
K KVAVL S L + ++ EI V+SN G +R ER GIP
Sbjct: 805 KVKVAVLISGTGTNLEALINSTKKPTSFAEIVLVVSNK-AGVEG--LRKAERAGIP 857
Score = 42 (19.8 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 7/8 (87%), Positives = 8/8 (100%)
Query: 94 FLERHGIP 101
FL+RHGIP
Sbjct: 113 FLDRHGIP 120
>UNIPROTKB|I3LH11 [details] [associations]
symbol:GART "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046872 "metal ion binding" evidence=IEA] [GO:0009113
"purine nucleobase biosynthetic process" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0006189 "'de novo'
IMP biosynthetic process" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004644
"phosphoribosylglycinamide formyltransferase activity"
evidence=IEA] [GO:0004641 "phosphoribosylformylglycinamidine
cyclo-ligase activity" evidence=IEA] [GO:0004637
"phosphoribosylamine-glycine ligase activity" evidence=IEA]
HAMAP:MF_00138 InterPro:IPR000115 InterPro:IPR000728
InterPro:IPR001555 InterPro:IPR002376 InterPro:IPR004607
InterPro:IPR004733 InterPro:IPR011761 InterPro:IPR013815
InterPro:IPR013816 InterPro:IPR016188 InterPro:IPR020559
InterPro:IPR020560 InterPro:IPR020562 Pfam:PF00551 Pfam:PF00586
Pfam:PF02843 Pfam:PF02844 PROSITE:PS00184 PROSITE:PS00373
PROSITE:PS50975 InterPro:IPR016185 Pfam:PF01071 GO:GO:0005524
GO:GO:0005737 GO:GO:0046872 Gene3D:3.30.1490.20 Gene3D:3.30.470.20
Gene3D:3.40.50.20 InterPro:IPR011054 SUPFAM:SSF52440
SUPFAM:SSF51246 GO:GO:0008168 GO:GO:0032259 Gene3D:3.40.50.170
SUPFAM:SSF53328 GO:GO:0006189 GO:GO:0009113 InterPro:IPR010918
Pfam:PF02769 SUPFAM:SSF56042 SUPFAM:SSF55326 GO:GO:0004637
Gene3D:3.90.600.10 InterPro:IPR020561 TIGRFAMs:TIGR00877
GeneTree:ENSGT00390000000292 GO:GO:0004641 GO:GO:0004644
TIGRFAMs:TIGR00878 TIGRFAMs:TIGR00639 EMBL:FP326748
Ensembl:ENSSSCT00000023147 Uniprot:I3LH11
Length = 1013
Score = 183 (69.5 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 38/95 (40%), Positives = 54/95 (56%)
Query: 161 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 220
F ILSG F+R + ++NIH LLPSFKG +Q DAGV + G T HFV E++DAG
Sbjct: 898 FMRILSGPFVRKWNGKMLNIHPSLLPSFKGSNAHEQVLDAGVTVTGCTVHFVAEDVDAGQ 957
Query: 221 IIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIK 255
I+ Q V D + T ++ + E + A++
Sbjct: 958 IVLQEAVPVKRGDTIETLSERVKLAEHKIFPSALQ 992
Score = 40 (19.1 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 6/8 (75%), Positives = 8/8 (100%)
Query: 94 FLERHGIP 101
F++RHGIP
Sbjct: 114 FMDRHGIP 121
>UNIPROTKB|I3LP37 [details] [associations]
symbol:GART "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046872 "metal ion binding" evidence=IEA] [GO:0009113
"purine nucleobase biosynthetic process" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0006189 "'de novo'
IMP biosynthetic process" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004644
"phosphoribosylglycinamide formyltransferase activity"
evidence=IEA] [GO:0004641 "phosphoribosylformylglycinamidine
cyclo-ligase activity" evidence=IEA] [GO:0004637
"phosphoribosylamine-glycine ligase activity" evidence=IEA]
HAMAP:MF_00138 InterPro:IPR000115 InterPro:IPR000728
InterPro:IPR001555 InterPro:IPR002376 InterPro:IPR004607
InterPro:IPR004733 InterPro:IPR011761 InterPro:IPR013815
InterPro:IPR013816 InterPro:IPR016188 InterPro:IPR020559
InterPro:IPR020560 InterPro:IPR020562 Pfam:PF00551 Pfam:PF00586
Pfam:PF02843 Pfam:PF02844 PROSITE:PS00184 PROSITE:PS00373
PROSITE:PS50975 InterPro:IPR016185 Pfam:PF01071 GO:GO:0005524
GO:GO:0005737 GO:GO:0046872 Gene3D:3.30.1490.20 Gene3D:3.30.470.20
Gene3D:3.40.50.20 InterPro:IPR011054 SUPFAM:SSF52440
SUPFAM:SSF51246 GO:GO:0008168 GO:GO:0032259 Gene3D:3.40.50.170
SUPFAM:SSF53328 GO:GO:0006189 GO:GO:0009113 InterPro:IPR010918
Pfam:PF02769 SUPFAM:SSF56042 SUPFAM:SSF55326 GO:GO:0004637
Gene3D:3.90.600.10 InterPro:IPR020561 TIGRFAMs:TIGR00877
GeneTree:ENSGT00390000000292 OMA:GETSEMP GO:GO:0004641
GO:GO:0004644 TIGRFAMs:TIGR00878 TIGRFAMs:TIGR00639 EMBL:FP326748
Ensembl:ENSSSCT00000022788 Uniprot:I3LP37
Length = 1048
Score = 183 (69.5 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 38/95 (40%), Positives = 54/95 (56%)
Query: 161 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 220
F ILSG F+R + ++NIH LLPSFKG +Q DAGV + G T HFV E++DAG
Sbjct: 933 FMRILSGPFVRKWNGKMLNIHPSLLPSFKGSNAHEQVLDAGVTVTGCTVHFVAEDVDAGQ 992
Query: 221 IIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIK 255
I+ Q V D + T ++ + E + A++
Sbjct: 993 IVLQEAVPVKRGDTIETLSERVKLAEHKIFPSALQ 1027
Score = 40 (19.1 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 6/8 (75%), Positives = 8/8 (100%)
Query: 94 FLERHGIP 101
F++RHGIP
Sbjct: 149 FMDRHGIP 156
>UNIPROTKB|G3V918 [details] [associations]
symbol:Gart "Phosphoribosylglycinamide formyltransferase,
isoform CRA_a" species:10116 "Rattus norvegicus" [GO:0004637
"phosphoribosylamine-glycine ligase activity" evidence=IEA]
[GO:0004641 "phosphoribosylformylglycinamidine cyclo-ligase
activity" evidence=IEA] [GO:0004644 "phosphoribosylglycinamide
formyltransferase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006189
"'de novo' IMP biosynthetic process" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0009113 "purine
nucleobase biosynthetic process" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] HAMAP:MF_00138 InterPro:IPR000115
InterPro:IPR000728 InterPro:IPR001555 InterPro:IPR002376
InterPro:IPR004607 InterPro:IPR004733 InterPro:IPR011761
InterPro:IPR013815 InterPro:IPR013816 InterPro:IPR016188
InterPro:IPR020559 InterPro:IPR020560 InterPro:IPR020562
Pfam:PF00551 Pfam:PF00586 Pfam:PF02843 Pfam:PF02844 PROSITE:PS00184
PROSITE:PS00373 PROSITE:PS50975 InterPro:IPR016185 Pfam:PF01071
RGD:1308717 GO:GO:0005524 GO:GO:0005737 GO:GO:0046872
Gene3D:3.30.1490.20 Gene3D:3.30.470.20 Gene3D:3.40.50.20
InterPro:IPR011054 SUPFAM:SSF52440 SUPFAM:SSF51246 GO:GO:0008168
GO:GO:0032259 Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0006189
GO:GO:0009113 InterPro:IPR010918 Pfam:PF02769 SUPFAM:SSF56042
SUPFAM:SSF55326 GO:GO:0004637 Gene3D:3.90.600.10 InterPro:IPR020561
TIGRFAMs:TIGR00877 CTD:2618 GeneTree:ENSGT00390000000292 KO:K11787
OMA:GETSEMP GO:GO:0004641 GO:GO:0004644 TIGRFAMs:TIGR00878
TIGRFAMs:TIGR00639 EMBL:CH473989 EMBL:AC120974 EMBL:AC120736
RefSeq:NP_001011899.2 UniGene:Rn.55532 ProteinModelPortal:G3V918
PRIDE:G3V918 Ensembl:ENSRNOT00000032162 GeneID:288259
KEGG:rno:288259 NextBio:627860 Uniprot:G3V918
Length = 1010
Score = 179 (68.1 bits), Expect = 4.6e-14, Sum P(2) = 4.6e-14
Identities = 38/95 (40%), Positives = 54/95 (56%)
Query: 161 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 220
F ILSG F+R + ++NIH LLPSFKG +Q +AGV + G T HFV E++DAG
Sbjct: 895 FMRILSGPFVRKWDGKMLNIHPSLLPSFKGSNAHEQVLEAGVTITGCTVHFVAEDVDAGQ 954
Query: 221 IIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIK 255
II Q V D + T ++ + E + A++
Sbjct: 955 IILQEAVPVQRDDTVATLSERVKAAEHKIFPAALQ 989
Score = 41 (19.5 bits), Expect = 4.6e-14, Sum P(2) = 4.6e-14
Identities = 20/61 (32%), Positives = 27/61 (44%)
Query: 41 PDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGI 100
P K +VAVL S L + ++ K I VISN + + + R ER GI
Sbjct: 802 PSQQKKARVAVLISGTGSNLQALIDSTRDPKSSSHIVLVISN--KAAVAGLDR-AERAGI 858
Query: 101 P 101
P
Sbjct: 859 P 859
Score = 39 (18.8 bits), Expect = 7.4e-14, Sum P(2) = 7.4e-14
Identities = 5/8 (62%), Positives = 8/8 (100%)
Query: 94 FLERHGIP 101
F++RHG+P
Sbjct: 113 FMDRHGVP 120
>UNIPROTKB|J9NUS5 [details] [associations]
symbol:J9NUS5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0009113 "purine nucleobase biosynthetic process" evidence=IEA]
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0006189
"'de novo' IMP biosynthetic process" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004644 "phosphoribosylglycinamide
formyltransferase activity" evidence=IEA] [GO:0004637
"phosphoribosylamine-glycine ligase activity" evidence=IEA]
HAMAP:MF_00138 InterPro:IPR000115 InterPro:IPR000728
InterPro:IPR001555 InterPro:IPR002376 InterPro:IPR004607
InterPro:IPR011761 InterPro:IPR013815 InterPro:IPR013816
InterPro:IPR016188 InterPro:IPR020559 InterPro:IPR020560
InterPro:IPR020562 Pfam:PF00551 Pfam:PF00586 Pfam:PF02843
Pfam:PF02844 PROSITE:PS00184 PROSITE:PS00373 PROSITE:PS50975
InterPro:IPR016185 Pfam:PF01071 GO:GO:0005524 GO:GO:0046872
Gene3D:3.30.1490.20 Gene3D:3.30.470.20 Gene3D:3.40.50.20
InterPro:IPR011054 SUPFAM:SSF52440 SUPFAM:SSF51246 GO:GO:0008168
GO:GO:0032259 Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0006189
GO:GO:0009113 InterPro:IPR010918 Pfam:PF02769 SUPFAM:SSF56042
SUPFAM:SSF55326 GO:GO:0004637 Gene3D:3.90.600.10 InterPro:IPR020561
TIGRFAMs:TIGR00877 GeneTree:ENSGT00390000000292 GO:GO:0004644
TIGRFAMs:TIGR00639 EMBL:AAEX03016498 Ensembl:ENSCAFT00000047378
OMA:NAEPLFF Uniprot:J9NUS5
Length = 988
Score = 178 (67.7 bits), Expect = 7.0e-14, Sum P(2) = 7.0e-14
Identities = 39/95 (41%), Positives = 55/95 (57%)
Query: 161 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 220
F ILSG F+R + ++NIH LLPSFKG +QA +AGV + G T HFV E++DAG
Sbjct: 873 FMRILSGPFVRKWDGKMLNIHPSLLPSFKGSNAHEQALEAGVTVTGCTVHFVAEDVDAGQ 932
Query: 221 IIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIK 255
II Q V D + T ++ + E + A++
Sbjct: 933 IILQESVPVKRGDTVATLSERVKLAEHKIFPAALQ 967
Score = 40 (19.1 bits), Expect = 7.0e-14, Sum P(2) = 7.0e-14
Identities = 6/8 (75%), Positives = 8/8 (100%)
Query: 94 FLERHGIP 101
F++RHGIP
Sbjct: 114 FMDRHGIP 121
>UNIPROTKB|J9P7I4 [details] [associations]
symbol:GART "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0009113 "purine nucleobase biosynthetic process" evidence=IEA]
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0006189
"'de novo' IMP biosynthetic process" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004644 "phosphoribosylglycinamide formyltransferase activity"
evidence=IEA] [GO:0004641 "phosphoribosylformylglycinamidine
cyclo-ligase activity" evidence=IEA] [GO:0004637
"phosphoribosylamine-glycine ligase activity" evidence=IEA]
HAMAP:MF_00138 InterPro:IPR000115 InterPro:IPR000728
InterPro:IPR001555 InterPro:IPR002376 InterPro:IPR004607
InterPro:IPR004733 InterPro:IPR011761 InterPro:IPR013815
InterPro:IPR013816 InterPro:IPR016188 InterPro:IPR020559
InterPro:IPR020560 InterPro:IPR020562 Pfam:PF00551 Pfam:PF00586
Pfam:PF02843 Pfam:PF02844 PROSITE:PS00184 PROSITE:PS00373
PROSITE:PS50975 InterPro:IPR016185 Pfam:PF01071 GO:GO:0005524
GO:GO:0005737 GO:GO:0046872 Gene3D:3.30.1490.20 Gene3D:3.30.470.20
Gene3D:3.40.50.20 InterPro:IPR011054 SUPFAM:SSF52440
SUPFAM:SSF51246 GO:GO:0008168 GO:GO:0032259 Gene3D:3.40.50.170
SUPFAM:SSF53328 GO:GO:0006189 GO:GO:0009113 InterPro:IPR010918
Pfam:PF02769 SUPFAM:SSF56042 SUPFAM:SSF55326 GO:GO:0004637
Gene3D:3.90.600.10 InterPro:IPR020561 TIGRFAMs:TIGR00877
GeneTree:ENSGT00390000000292 KO:K11787 GO:GO:0004641 GO:GO:0004644
TIGRFAMs:TIGR00878 TIGRFAMs:TIGR00639 HAMAP:MF_00741_B
EMBL:AAEX03016493 RefSeq:XP_003640123.1 Ensembl:ENSCAFT00000045808
GeneID:100856570 KEGG:cfa:100856570 Uniprot:J9P7I4
Length = 1011
Score = 178 (67.7 bits), Expect = 7.4e-14, Sum P(2) = 7.4e-14
Identities = 39/95 (41%), Positives = 55/95 (57%)
Query: 161 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 220
F ILSG F+R + ++NIH LLPSFKG +QA +AGV + G T HFV E++DAG
Sbjct: 896 FMRILSGPFVRKWDGKMLNIHPSLLPSFKGSNAHEQALEAGVTVTGCTVHFVAEDVDAGQ 955
Query: 221 IIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIK 255
II Q V D + T ++ + E + A++
Sbjct: 956 IILQESVPVKRGDTVATLSERVKLAEHKIFPAALQ 990
Score = 40 (19.1 bits), Expect = 7.4e-14, Sum P(2) = 7.4e-14
Identities = 6/8 (75%), Positives = 8/8 (100%)
Query: 94 FLERHGIP 101
F++RHGIP
Sbjct: 113 FMDRHGIP 120
>UNIPROTKB|F1PTG8 [details] [associations]
symbol:GART "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0009113 "purine nucleobase biosynthetic process" evidence=IEA]
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0006189
"'de novo' IMP biosynthetic process" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004644 "phosphoribosylglycinamide formyltransferase activity"
evidence=IEA] [GO:0004641 "phosphoribosylformylglycinamidine
cyclo-ligase activity" evidence=IEA] [GO:0004637
"phosphoribosylamine-glycine ligase activity" evidence=IEA]
HAMAP:MF_00138 InterPro:IPR000115 InterPro:IPR000728
InterPro:IPR001555 InterPro:IPR002376 InterPro:IPR004607
InterPro:IPR004733 InterPro:IPR011761 InterPro:IPR013815
InterPro:IPR013816 InterPro:IPR016188 InterPro:IPR020559
InterPro:IPR020560 InterPro:IPR020562 Pfam:PF00551 Pfam:PF00586
Pfam:PF02843 Pfam:PF02844 PROSITE:PS00184 PROSITE:PS00373
PROSITE:PS50975 InterPro:IPR016185 Pfam:PF01071 GO:GO:0005524
GO:GO:0005737 GO:GO:0046872 Gene3D:3.30.1490.20 Gene3D:3.30.470.20
Gene3D:3.40.50.20 InterPro:IPR011054 SUPFAM:SSF52440
SUPFAM:SSF51246 GO:GO:0008168 GO:GO:0032259 Gene3D:3.40.50.170
SUPFAM:SSF53328 GO:GO:0006189 GO:GO:0009113 InterPro:IPR010918
Pfam:PF02769 SUPFAM:SSF56042 SUPFAM:SSF55326 GO:GO:0004637
Gene3D:3.90.600.10 InterPro:IPR020561 TIGRFAMs:TIGR00877
GeneTree:ENSGT00390000000292 OMA:GETSEMP GO:GO:0004641
GO:GO:0004644 TIGRFAMs:TIGR00878 TIGRFAMs:TIGR00639
HAMAP:MF_00741_B EMBL:AAEX03016493 Ensembl:ENSCAFT00000014731
Uniprot:F1PTG8
Length = 1047
Score = 178 (67.7 bits), Expect = 8.1e-14, Sum P(2) = 8.1e-14
Identities = 39/95 (41%), Positives = 55/95 (57%)
Query: 161 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 220
F ILSG F+R + ++NIH LLPSFKG +QA +AGV + G T HFV E++DAG
Sbjct: 932 FMRILSGPFVRKWDGKMLNIHPSLLPSFKGSNAHEQALEAGVTVTGCTVHFVAEDVDAGQ 991
Query: 221 IIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIK 255
II Q V D + T ++ + E + A++
Sbjct: 992 IILQESVPVKRGDTVATLSERVKLAEHKIFPAALQ 1026
Score = 40 (19.1 bits), Expect = 8.1e-14, Sum P(2) = 8.1e-14
Identities = 6/8 (75%), Positives = 8/8 (100%)
Query: 94 FLERHGIP 101
F++RHGIP
Sbjct: 147 FMDRHGIP 154
>TIGR_CMR|NSE_0474 [details] [associations]
symbol:NSE_0474 "phosphoribosylglycinamide
formyltransferase" species:222891 "Neorickettsia sennetsu str.
Miyayama" [GO:0004644 "phosphoribosylglycinamide formyltransferase
activity" evidence=ISS] [GO:0009152 "purine ribonucleotide
biosynthetic process" evidence=ISS] InterPro:IPR002376
InterPro:IPR004607 Pfam:PF00551 Gene3D:3.40.50.170 SUPFAM:SSF53328
GO:GO:0006189 EMBL:CP000237 GenomeReviews:CP000237_GR GO:GO:0004644
TIGRFAMs:TIGR00639 eggNOG:COG0299 HOGENOM:HOG000033575 KO:K11175
RefSeq:YP_506359.1 ProteinModelPortal:Q2GDT7 STRING:Q2GDT7
GeneID:3931556 KEGG:nse:NSE_0474 PATRIC:22680997 OMA:HALEYEW
ProtClustDB:CLSK2528068 BioCyc:NSEN222891:GHFU-495-MONOMER
Uniprot:Q2GDT7
Length = 192
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 39/95 (41%), Positives = 54/95 (56%)
Query: 161 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 220
F ILS F+ G D+INIH LLPSF+G +A AGVK+ G T H+VT E+DAG
Sbjct: 82 FMKILSKDFISRVGCDIINIHPSLLPSFRGLNAQAEALAAGVKIAGCTVHYVTPEVDAGK 141
Query: 221 IIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIK 255
II Q V D +++ ++ E +C A++
Sbjct: 142 IIVQGAVPVLKNDTVKSLSERILKAEHKCFPIAVE 176
>UNIPROTKB|Q59A32 [details] [associations]
symbol:GART "Trifunctional purine biosynthetic protein
adenosine-3" species:9913 "Bos taurus" [GO:0006189 "'de novo' IMP
biosynthetic process" evidence=IEA] [GO:0004644
"phosphoribosylglycinamide formyltransferase activity"
evidence=IEA] [GO:0004641 "phosphoribosylformylglycinamidine
cyclo-ligase activity" evidence=IEA] [GO:0004637
"phosphoribosylamine-glycine ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009113 "purine nucleobase biosynthetic
process" evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000115 InterPro:IPR000728 InterPro:IPR001555
InterPro:IPR002376 InterPro:IPR004607 InterPro:IPR004733
InterPro:IPR011761 InterPro:IPR013815 InterPro:IPR013816
InterPro:IPR016188 InterPro:IPR020559 InterPro:IPR020560
InterPro:IPR020562 Pfam:PF00551 Pfam:PF00586 Pfam:PF02843
Pfam:PF02844 PROSITE:PS00184 PROSITE:PS00373 PROSITE:PS50975
UniPathway:UPA00074 InterPro:IPR016185 Pfam:PF01071 GO:GO:0005524
GO:GO:0005737 GO:GO:0046872 Gene3D:3.30.1490.20 Gene3D:3.30.470.20
Gene3D:3.40.50.20 InterPro:IPR011054 SUPFAM:SSF52440
SUPFAM:SSF51246 GO:GO:0008168 GO:GO:0032259 Gene3D:3.40.50.170
SUPFAM:SSF53328 GO:GO:0006189 GO:GO:0009113 InterPro:IPR010918
Pfam:PF02769 SUPFAM:SSF56042 SUPFAM:SSF55326 eggNOG:COG0151
GO:GO:0004637 Gene3D:3.90.600.10 InterPro:IPR020561
TIGRFAMs:TIGR00877 EMBL:AJ780930 EMBL:BC122573 IPI:IPI00709162
RefSeq:NP_001035563.1 UniGene:Bt.11270 UniGene:Bt.94801 HSSP:P22102
ProteinModelPortal:Q59A32 SMR:Q59A32 STRING:Q59A32 PRIDE:Q59A32
Ensembl:ENSBTAT00000012108 GeneID:281183 KEGG:bta:281183 CTD:2618
GeneTree:ENSGT00390000000292 HOGENOM:HOG000030315
HOVERGEN:HBG008333 InParanoid:Q59A32 KO:K11787 OMA:GETSEMP
OrthoDB:EOG4FFD13 NextBio:20805240 ArrayExpress:Q59A32
GO:GO:0004641 GO:GO:0004644 TIGRFAMs:TIGR00878 TIGRFAMs:TIGR00639
Uniprot:Q59A32
Length = 1010
Score = 183 (69.5 bits), Expect = 6.8e-13, P = 6.8e-13
Identities = 39/95 (41%), Positives = 54/95 (56%)
Query: 161 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 220
F ILSG F+R + ++NIH LLPSFKG +Q DAGV + G T HFV E++DAG
Sbjct: 895 FMRILSGPFVRKWNGKMLNIHPSLLPSFKGSNAHEQVLDAGVTVTGCTVHFVAEDVDAGQ 954
Query: 221 IIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIK 255
II Q V D + T ++ + E + A++
Sbjct: 955 IILQEAVPVKRGDTVETLSERVKLAEHKIFPSALQ 989
>MGI|MGI:95654 [details] [associations]
symbol:Gart "phosphoribosylglycinamide formyltransferase"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0004637 "phosphoribosylamine-glycine ligase activity"
evidence=ISO] [GO:0004641 "phosphoribosylformylglycinamidine
cyclo-ligase activity" evidence=ISO] [GO:0004644
"phosphoribosylglycinamide formyltransferase activity"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006164 "purine nucleotide
biosynthetic process" evidence=IEA] [GO:0006189 "'de novo' IMP
biosynthetic process" evidence=IEA] [GO:0006544 "glycine metabolic
process" evidence=ISO] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0009113 "purine nucleobase biosynthetic process" evidence=IEA]
[GO:0009156 "ribonucleoside monophosphate biosynthetic process"
evidence=ISO] [GO:0010033 "response to organic substance"
evidence=ISO] [GO:0010035 "response to inorganic substance"
evidence=ISO] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016742 "hydroxymethyl-, formyl- and related transferase
activity" evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0046654 "tetrahydrofolate biosynthetic process" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000115
InterPro:IPR000728 InterPro:IPR001555 InterPro:IPR002376
InterPro:IPR004607 InterPro:IPR004733 InterPro:IPR011761
InterPro:IPR013815 InterPro:IPR013816 InterPro:IPR016188
InterPro:IPR020559 InterPro:IPR020560 InterPro:IPR020562
Pfam:PF00551 Pfam:PF00586 Pfam:PF02843 Pfam:PF02844 PROSITE:PS00184
PROSITE:PS00373 PROSITE:PS50975 UniPathway:UPA00074
InterPro:IPR016185 Pfam:PF01071 MGI:MGI:95654 GO:GO:0005524
GO:GO:0005737 GO:GO:0046872 GO:GO:0010033 Gene3D:3.30.1490.20
Gene3D:3.30.470.20 Gene3D:3.40.50.20 InterPro:IPR011054
SUPFAM:SSF52440 SUPFAM:SSF51246 GO:GO:0010035 GO:GO:0008168
GO:GO:0032259 Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0006189
GO:GO:0009113 EMBL:CH466602 GO:GO:0048513 InterPro:IPR010918
Pfam:PF02769 SUPFAM:SSF56042 SUPFAM:SSF55326 eggNOG:COG0151
GO:GO:0004637 Gene3D:3.90.600.10 InterPro:IPR020561
TIGRFAMs:TIGR00877 CTD:2618 GeneTree:ENSGT00390000000292
HOGENOM:HOG000030315 HOVERGEN:HBG008333 KO:K11787 OrthoDB:EOG4FFD13
GO:GO:0004641 GO:GO:0004644 TIGRFAMs:TIGR00878 TIGRFAMs:TIGR00639
ChiTaRS:GART EMBL:U01023 EMBL:U01024 EMBL:U20886 EMBL:U20875
EMBL:U20876 EMBL:U20877 EMBL:U20879 EMBL:U20880 EMBL:U20881
EMBL:U20882 EMBL:U20883 EMBL:U20892 EMBL:U20884 EMBL:U20887
EMBL:U20885 EMBL:U20889 EMBL:U20890 EMBL:U20891 EMBL:AK168501
EMBL:AK168724 EMBL:AK168796 EMBL:AK168864 EMBL:AK168876
EMBL:BC070465 IPI:IPI00230612 IPI:IPI00323644 PIR:I67805
RefSeq:NP_034386.2 UniGene:Mm.4505 ProteinModelPortal:Q64737
SMR:Q64737 STRING:Q64737 PhosphoSite:Q64737 PaxDb:Q64737
PRIDE:Q64737 Ensembl:ENSMUST00000023684 Ensembl:ENSMUST00000120450
GeneID:14450 KEGG:mmu:14450 InParanoid:Q3TGI3 OMA:YRTDIAQ
SABIO-RK:Q64737 BindingDB:Q64737 ChEMBL:CHEMBL3690 NextBio:286065
Bgee:Q64737 CleanEx:MM_GART Genevestigator:Q64737
GermOnline:ENSMUSG00000022962 Uniprot:Q64737
Length = 1010
Score = 177 (67.4 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 38/95 (40%), Positives = 54/95 (56%)
Query: 161 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 220
F ILSG F+R + ++NIH LLPSFKG +Q +AGV + G T HFV E++DAG
Sbjct: 895 FMRILSGPFVRKWDGKMLNIHPSLLPSFKGSNAHEQVLEAGVTITGCTVHFVAEDVDAGQ 954
Query: 221 IIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIK 255
II Q V D + T ++ + E + A++
Sbjct: 955 IILQEAVPVRRGDTVATLSERVKVAEHKIFPAALQ 989
Score = 38 (18.4 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 46 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 101
K +VAVL S L + ++ K I VISN + + + R ER GIP
Sbjct: 807 KARVAVLISGTGSNLQALIDSTRDPKSSSHIVLVISN--KAAVAGLDR-AERAGIP 859
>TIGR_CMR|BA_0297 [details] [associations]
symbol:BA_0297 "phosphoribosylglycinamide
formyltransferase" species:198094 "Bacillus anthracis str. Ames"
[GO:0004644 "phosphoribosylglycinamide formyltransferase activity"
evidence=ISS] [GO:0009152 "purine ribonucleotide biosynthetic
process" evidence=ISS] InterPro:IPR001555 InterPro:IPR002376
InterPro:IPR004607 Pfam:PF00551 PROSITE:PS00373 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008168
GO:GO:0032259 Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0006189
HSSP:P22102 GO:GO:0004644 TIGRFAMs:TIGR00639 HOGENOM:HOG000033575
OMA:SNFEAIA KO:K11175 ProtClustDB:PRK05647 RefSeq:NP_842847.1
RefSeq:YP_016909.1 RefSeq:YP_026564.1 ProteinModelPortal:Q81ZG9
DNASU:1086381 EnsemblBacteria:EBBACT00000011858
EnsemblBacteria:EBBACT00000018475 EnsemblBacteria:EBBACT00000021884
GeneID:1086381 GeneID:2815801 GeneID:2848432 KEGG:ban:BA_0297
KEGG:bar:GBAA_0297 KEGG:bat:BAS0284
BioCyc:BANT260799:GJAJ-326-MONOMER
BioCyc:BANT261594:GJ7F-335-MONOMER Uniprot:Q81ZG9
Length = 195
Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 35/91 (38%), Positives = 48/91 (52%)
Query: 164 ILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIE 223
++ L +YG +INIH LLPSF G QA +AGVK+ G T H+V +D GPII
Sbjct: 92 LIGPTLLEAYGGRIINIHPSLLPSFPGKDAVGQALEAGVKVTGVTIHYVDAGMDTGPIIA 151
Query: 224 QMVERVSHRDNLRTFVQKSEDVEKQCLAKAI 254
Q VS D + +K + VE + +
Sbjct: 152 QEAVVVSEGDTRESLQKKIQQVEHKLYVNTV 182
>UNIPROTKB|B4DJ93 [details] [associations]
symbol:GART "Phosphoribosylformylglycinamidine
cyclo-ligase" species:9606 "Homo sapiens" [GO:0004641
"phosphoribosylformylglycinamidine cyclo-ligase activity"
evidence=IEA] [GO:0004644 "phosphoribosylglycinamide
formyltransferase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006189 "'de novo' IMP biosynthetic process"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] InterPro:IPR000728 InterPro:IPR001555
InterPro:IPR002376 InterPro:IPR004607 InterPro:IPR004733
InterPro:IPR016188 Pfam:PF00551 Pfam:PF00586 PROSITE:PS00373
GO:GO:0005737 GO:GO:0010033 GO:GO:0010035 GO:GO:0008168
GO:GO:0032259 Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0006189
GO:GO:0048513 InterPro:IPR010918 Pfam:PF02769 SUPFAM:SSF56042
SUPFAM:SSF55326 GO:GO:0004641 GO:GO:0004644 TIGRFAMs:TIGR00878
TIGRFAMs:TIGR00639 UniGene:Hs.473648 HGNC:HGNC:4163 ChiTaRS:GART
EMBL:AP000303 EMBL:AP000302 EMBL:AK295980 IPI:IPI01012741
SMR:B4DJ93 STRING:B4DJ93 Ensembl:ENST00000543717 Uniprot:B4DJ93
Length = 562
Score = 173 (66.0 bits), Expect = 7.0e-12, Sum P(2) = 7.0e-12
Identities = 37/95 (38%), Positives = 54/95 (56%)
Query: 161 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 220
F ILSG F++ + ++NIH LLPSFKG +QA + GV + G T HFV E++DAG
Sbjct: 447 FMRILSGPFVQKWNGKMLNIHPSLLPSFKGSNAHEQALETGVTVTGCTVHFVAEDVDAGQ 506
Query: 221 IIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIK 255
II Q V D + T ++ + E + A++
Sbjct: 507 IILQEAVPVKRGDTVATLSERVKLAEHKIFPAALQ 541
Score = 36 (17.7 bits), Expect = 7.0e-12, Sum P(2) = 7.0e-12
Identities = 18/56 (32%), Positives = 26/56 (46%)
Query: 46 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 101
K +VAVL S L + +E +I VISN + + + + ER GIP
Sbjct: 359 KARVAVLISGTGSNLQALIDSTREPNSSAQIDIVISN--KAAVAGLDK-AERAGIP 411
>UNIPROTKB|P22102 [details] [associations]
symbol:GART "Trifunctional purine biosynthetic protein
adenosine-3" species:9606 "Homo sapiens" [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0009113 "purine
nucleobase biosynthetic process" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0004637 "phosphoribosylamine-glycine ligase
activity" evidence=IEA] [GO:0004641
"phosphoribosylformylglycinamidine cyclo-ligase activity"
evidence=IEA] [GO:0004644 "phosphoribosylglycinamide
formyltransferase activity" evidence=IEA] [GO:0006189 "'de novo'
IMP biosynthetic process" evidence=IEA] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006144 "purine nucleobase metabolic process"
evidence=TAS] [GO:0009168 "purine ribonucleoside monophosphate
biosynthetic process" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0055086 "nucleobase-containing
small molecule metabolic process" evidence=TAS]
Reactome:REACT_111217 InterPro:IPR000115 InterPro:IPR000728
InterPro:IPR001555 InterPro:IPR002376 InterPro:IPR004607
InterPro:IPR004733 InterPro:IPR011761 InterPro:IPR013815
InterPro:IPR013816 InterPro:IPR016188 InterPro:IPR020559
InterPro:IPR020560 InterPro:IPR020562 Pfam:PF00551 Pfam:PF00586
Pfam:PF02843 Pfam:PF02844 PROSITE:PS00184 PROSITE:PS00373
PROSITE:PS50975 UniPathway:UPA00074 InterPro:IPR016185 Pfam:PF01071
GO:GO:0005829 GO:GO:0005524 GO:GO:0046872 GO:GO:0006144
GO:GO:0010033 EMBL:CH471079 Gene3D:3.30.1490.20 Gene3D:3.30.470.20
Gene3D:3.40.50.20 InterPro:IPR011054 SUPFAM:SSF52440
SUPFAM:SSF51246 GO:GO:0010035 GO:GO:0009168 GO:GO:0008168
GO:GO:0032259 Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0006189
GO:GO:0009113 GO:GO:0048513 DrugBank:DB00642 InterPro:IPR010918
Pfam:PF02769 SUPFAM:SSF56042 SUPFAM:SSF55326 eggNOG:COG0151
GO:GO:0004637 Gene3D:3.90.600.10 InterPro:IPR020561
TIGRFAMs:TIGR00877 CTD:2618 HOVERGEN:HBG008333 KO:K11787
OMA:GETSEMP OrthoDB:EOG4FFD13 GO:GO:0004641 GO:GO:0004644
TIGRFAMs:TIGR00878 TIGRFAMs:TIGR00639 EMBL:X54199 EMBL:AK292560
EMBL:AK292897 EMBL:BC038958 EMBL:BC093641 EMBL:BC101565
EMBL:AF008653 EMBL:M32082 IPI:IPI00025273 IPI:IPI00218408
PIR:S12616 RefSeq:NP_000810.1 RefSeq:NP_001129477.1
RefSeq:NP_001129478.1 RefSeq:NP_780294.1 UniGene:Hs.473648 PDB:1MEJ
PDB:1MEN PDB:1MEO PDB:1NJS PDB:1RBM PDB:1RBQ PDB:1RBY PDB:1RBZ
PDB:1RC0 PDB:1RC1 PDB:1ZLX PDB:1ZLY PDB:2QK4 PDB:2V9Y PDBsum:1MEJ
PDBsum:1MEN PDBsum:1MEO PDBsum:1NJS PDBsum:1RBM PDBsum:1RBQ
PDBsum:1RBY PDBsum:1RBZ PDBsum:1RC0 PDBsum:1RC1 PDBsum:1ZLX
PDBsum:1ZLY PDBsum:2QK4 PDBsum:2V9Y ProteinModelPortal:P22102
SMR:P22102 IntAct:P22102 MINT:MINT-1143007 STRING:P22102
PhosphoSite:P22102 DMDM:131616 PaxDb:P22102 PeptideAtlas:P22102
PRIDE:P22102 Ensembl:ENST00000361093 Ensembl:ENST00000381815
Ensembl:ENST00000381831 Ensembl:ENST00000381839 GeneID:2618
KEGG:hsa:2618 UCSC:uc002yrx.3 UCSC:uc002ysa.2 GeneCards:GC21M034870
HGNC:HGNC:4163 HPA:HPA002119 HPA:HPA005779 MIM:138440
neXtProt:NX_P22102 PharmGKB:PA28576 InParanoid:P22102
PhylomeDB:P22102 BindingDB:P22102 ChEMBL:CHEMBL3972 ChiTaRS:GART
EvolutionaryTrace:P22102 GenomeRNAi:2618 NextBio:10307
ArrayExpress:P22102 Bgee:P22102 CleanEx:HS_GART
Genevestigator:P22102 GermOnline:ENSG00000159131 Uniprot:P22102
Length = 1010
Score = 173 (66.0 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 37/95 (38%), Positives = 54/95 (56%)
Query: 161 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 220
F ILSG F++ + ++NIH LLPSFKG +QA + GV + G T HFV E++DAG
Sbjct: 895 FMRILSGPFVQKWNGKMLNIHPSLLPSFKGSNAHEQALETGVTVTGCTVHFVAEDVDAGQ 954
Query: 221 IIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIK 255
II Q V D + T ++ + E + A++
Sbjct: 955 IILQEAVPVKRGDTVATLSERVKLAEHKIFPAALQ 989
Score = 40 (19.1 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 6/8 (75%), Positives = 8/8 (100%)
Query: 94 FLERHGIP 101
F++RHGIP
Sbjct: 113 FMDRHGIP 120
Score = 36 (17.7 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 18/56 (32%), Positives = 26/56 (46%)
Query: 46 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 101
K +VAVL S L + +E +I VISN + + + + ER GIP
Sbjct: 807 KARVAVLISGTGSNLQALIDSTREPNSSAQIDIVISN--KAAVAGLDK-AERAGIP 859
>UNIPROTKB|Q9I9L3 [details] [associations]
symbol:GART "GART-A" species:9031 "Gallus gallus"
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0016742 "hydroxymethyl-,
formyl- and related transferase activity" evidence=IEA]
InterPro:IPR001555 InterPro:IPR002376 Pfam:PF00551 PROSITE:PS00373
GO:GO:0009058 GO:GO:0016742 GO:GO:0008168 GO:GO:0032259
Gene3D:3.40.50.170 SUPFAM:SSF53328 HSSP:P22102
GeneTree:ENSGT00390000000292 EMBL:AADN02010771 EMBL:AF236855
IPI:IPI00818054 STRING:Q9I9L3 Ensembl:ENSGALT00000036761
InParanoid:Q9I9L3 Uniprot:Q9I9L3
Length = 98
Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 32/79 (40%), Positives = 46/79 (58%)
Query: 177 VINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLR 236
++NIH LLPSFKG K +AGV++ G T HFV EE+DAG II Q V D +
Sbjct: 2 ILNIHPSLLPSFKGANAHKLVLEAGVRVTGCTVHFVAEEVDAGAIIFQEAVPVKIGDTVE 61
Query: 237 TFVQKSEDVEKQCLAKAIK 255
T ++ ++ E + A++
Sbjct: 62 TLSERVKEAEHRAFPAALQ 80
>TIGR_CMR|GSU_1759 [details] [associations]
symbol:GSU_1759 "phosphoribosylglycinamide
formyltransferase" species:243231 "Geobacter sulfurreducens PCA"
[GO:0004644 "phosphoribosylglycinamide formyltransferase activity"
evidence=ISS] [GO:0009152 "purine ribonucleotide biosynthetic
process" evidence=ISS] InterPro:IPR002376 InterPro:IPR004607
Pfam:PF00551 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0006189 GO:GO:0004644
TIGRFAMs:TIGR00639 HOGENOM:HOG000033575 OMA:SNFEAIA KO:K11175
RefSeq:NP_952809.1 ProteinModelPortal:Q74CB5 SMR:Q74CB5
GeneID:2685207 KEGG:gsu:GSU1759 PATRIC:22026363
ProtClustDB:CLSK828533 BioCyc:GSUL243231:GH27-1743-MONOMER
Uniprot:Q74CB5
Length = 206
Score = 134 (52.2 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 35/102 (34%), Positives = 50/102 (49%)
Query: 161 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 220
F I++ L ++ V+NIH LLP+F G QA GVK G T HFV E D GP
Sbjct: 92 FMRIVTPVLLDAFPNAVMNIHPALLPAFPGLHAQAQALRYGVKFSGCTVHFVDEGTDTGP 151
Query: 221 IIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRV 262
II Q V D+ + + + E + +AI+ + R+
Sbjct: 152 IIIQAAVPVMDDDDEASLSARIQREEHRAYPEAIRLFAAKRL 193
Score = 61 (26.5 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 49 VAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 101
V VL S L + ++G LP I CVISN ++ + +HG+P
Sbjct: 7 VGVLVSGNGSNLQAIIDRIEDGSLPARIVCVISNK---ADAFGLERARKHGVP 56
>ZFIN|ZDB-GENE-000616-14 [details] [associations]
symbol:gart "phosphoribosylglycinamide
formyltransferase" species:7955 "Danio rerio" [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004637 "phosphoribosylamine-glycine ligase
activity" evidence=IEA] [GO:0004644 "phosphoribosylglycinamide
formyltransferase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006189 "'de novo' IMP biosynthetic process"
evidence=IEA] [GO:0009113 "purine nucleobase biosynthetic process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0016742
"hydroxymethyl-, formyl- and related transferase activity"
evidence=IEA] [GO:0004641 "phosphoribosylformylglycinamidine
cyclo-ligase activity" evidence=IEA] [GO:0009058 "biosynthetic
process" evidence=IEA] [GO:0009790 "embryo development"
evidence=IMP] [GO:0043010 "camera-type eye development"
evidence=IMP] [GO:0043473 "pigmentation" evidence=IMP] [GO:0016740
"transferase activity" evidence=IEA] HAMAP:MF_00138
InterPro:IPR000115 InterPro:IPR000728 InterPro:IPR001555
InterPro:IPR002376 InterPro:IPR004607 InterPro:IPR004733
InterPro:IPR011761 InterPro:IPR013815 InterPro:IPR013816
InterPro:IPR016188 InterPro:IPR020559 InterPro:IPR020560
InterPro:IPR020562 Pfam:PF00551 Pfam:PF00586 Pfam:PF02843
Pfam:PF02844 PROSITE:PS00184 PROSITE:PS00373 PROSITE:PS50975
InterPro:IPR016185 Pfam:PF01071 ZFIN:ZDB-GENE-000616-14
GO:GO:0005524 GO:GO:0005737 GO:GO:0046872 GO:GO:0043010
GO:GO:0009790 Gene3D:3.30.1490.20 Gene3D:3.30.470.20
Gene3D:3.40.50.20 InterPro:IPR011054 SUPFAM:SSF52440
SUPFAM:SSF51246 GO:GO:0008168 GO:GO:0032259 Gene3D:3.40.50.170
SUPFAM:SSF53328 GO:GO:0006189 GO:GO:0009113 GO:GO:0043473
InterPro:IPR010918 Pfam:PF02769 SUPFAM:SSF56042 SUPFAM:SSF55326
GO:GO:0004637 Gene3D:3.90.600.10 InterPro:IPR020561
TIGRFAMs:TIGR00877 HSSP:P22102 CTD:2618 HOVERGEN:HBG008333
KO:K11787 GO:GO:0004641 GO:GO:0004644 TIGRFAMs:TIGR00878
TIGRFAMs:TIGR00639 EMBL:AF257743 IPI:IPI00497501 RefSeq:NP_571692.1
UniGene:Dr.4801 ProteinModelPortal:Q9I9E6 SMR:Q9I9E6 STRING:Q9I9E6
PRIDE:Q9I9E6 GeneID:58141 KEGG:dre:58141 InParanoid:Q9I9E6
NextBio:20892390 Uniprot:Q9I9E6
Length = 1017
Score = 173 (66.0 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 36/95 (37%), Positives = 55/95 (57%)
Query: 161 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 220
F IL+G F+R + ++NIH LLPSFKG KQA AGV++ G + HFV E++DAG
Sbjct: 900 FMRILTGPFVRKWSGKMLNIHPSLLPSFKGVNAQKQALQAGVRVTGCSVHFVAEDVDAGA 959
Query: 221 IIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIK 255
I+ Q V D+ + ++ + E + A++
Sbjct: 960 IVVQEAVPVLVTDSEESLSERIREAEHRAFPAALE 994
>TIGR_CMR|CPS_3197 [details] [associations]
symbol:CPS_3197 "phosphoribosylglycinamide
formyltransferase" species:167879 "Colwellia psychrerythraea 34H"
[GO:0004644 "phosphoribosylglycinamide formyltransferase activity"
evidence=ISS] [GO:0009152 "purine ribonucleotide biosynthetic
process" evidence=ISS] InterPro:IPR001555 InterPro:IPR002376
InterPro:IPR004607 Pfam:PF00551 PROSITE:PS00373 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0008168 GO:GO:0032259
Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0006189 GO:GO:0004644
TIGRFAMs:TIGR00639 eggNOG:COG0299 HOGENOM:HOG000033575 OMA:SNFEAIA
KO:K11175 ProtClustDB:PRK05647 RefSeq:YP_269893.1
ProteinModelPortal:Q47Z77 SMR:Q47Z77 STRING:Q47Z77 GeneID:3520443
KEGG:cps:CPS_3197 PATRIC:21469379
BioCyc:CPSY167879:GI48-3246-MONOMER Uniprot:Q47Z77
Length = 213
Score = 148 (57.2 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 34/102 (33%), Positives = 53/102 (51%)
Query: 161 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 220
F IL+ F++ + ++NIH LLP ++G ++A DAG + G + HFVTEELD GP
Sbjct: 90 FMRILTPSFVQHFQGKLLNIHPSLLPKYQGLNTHQRAIDAGDDVHGVSVHFVTEELDGGP 149
Query: 221 IIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRV 262
+I Q V D + + E + +K + E R+
Sbjct: 150 VILQAKVPVFEGDTSDDLAARVHEQEHRIYPLVVKWFAEKRL 191
Score = 36 (17.7 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 48 KVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISN 82
K+ VL S L + + P EI VISN
Sbjct: 4 KIVVLISGGGTNLQAIIDACTDSNYPAEIVGVISN 38
>UNIPROTKB|Q9KPY5 [details] [associations]
symbol:VC_2227 "Phosphoribosylglycinamide
formyltransferase" species:243277 "Vibrio cholerae O1 biovar El Tor
str. N16961" [GO:0004644 "phosphoribosylglycinamide
formyltransferase activity" evidence=ISS] [GO:0009152 "purine
ribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR001555 InterPro:IPR002376 InterPro:IPR004607
Pfam:PF00551 PROSITE:PS00373 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0008168 GO:GO:0032259
Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0006189 GO:GO:0009152
GO:GO:0004644 TIGRFAMs:TIGR00639 HSSP:P08179 OMA:SNFEAIA KO:K11175
ProtClustDB:PRK05647 PIR:G82103 RefSeq:NP_231858.1
ProteinModelPortal:Q9KPY5 SMR:Q9KPY5 DNASU:2613267 GeneID:2613267
KEGG:vch:VC2227 PATRIC:20083501 Uniprot:Q9KPY5
Length = 212
Score = 152 (58.6 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 35/99 (35%), Positives = 53/99 (53%)
Query: 164 ILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIE 223
ILS +F+R Y +INIH LLP + G ++A AG + G + HFVTE+LD GP+I
Sbjct: 92 ILSSEFVRHYLGRMINIHPSLLPKYPGLNTYQRAIHAGDEEHGTSVHFVTEQLDGGPVIL 151
Query: 224 QMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRV 262
Q + D + + +D E + +K + E R+
Sbjct: 152 QAKVPIFEDDTVEELTARVQDQEHRIYPLVVKWFVEERL 190
>TIGR_CMR|VC_2227 [details] [associations]
symbol:VC_2227 "phosphoribosylglycinamide
formyltransferase" species:686 "Vibrio cholerae O1 biovar El Tor"
[GO:0004644 "phosphoribosylglycinamide formyltransferase activity"
evidence=ISS] [GO:0009152 "purine ribonucleotide biosynthetic
process" evidence=ISS] InterPro:IPR001555 InterPro:IPR002376
InterPro:IPR004607 Pfam:PF00551 PROSITE:PS00373 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0008168 GO:GO:0032259
Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0006189 GO:GO:0009152
GO:GO:0004644 TIGRFAMs:TIGR00639 HSSP:P08179 OMA:SNFEAIA KO:K11175
ProtClustDB:PRK05647 PIR:G82103 RefSeq:NP_231858.1
ProteinModelPortal:Q9KPY5 SMR:Q9KPY5 DNASU:2613267 GeneID:2613267
KEGG:vch:VC2227 PATRIC:20083501 Uniprot:Q9KPY5
Length = 212
Score = 152 (58.6 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 35/99 (35%), Positives = 53/99 (53%)
Query: 164 ILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIE 223
ILS +F+R Y +INIH LLP + G ++A AG + G + HFVTE+LD GP+I
Sbjct: 92 ILSSEFVRHYLGRMINIHPSLLPKYPGLNTYQRAIHAGDEEHGTSVHFVTEQLDGGPVIL 151
Query: 224 QMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRV 262
Q + D + + +D E + +K + E R+
Sbjct: 152 QAKVPIFEDDTVEELTARVQDQEHRIYPLVVKWFVEERL 190
>WB|WBGene00018174 [details] [associations]
symbol:F38B6.4 species:6239 "Caenorhabditis elegans"
[GO:0004637 "phosphoribosylamine-glycine ligase activity"
evidence=IEA] [GO:0009113 "purine nucleobase biosynthetic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0009058 "biosynthetic process" evidence=IEA] [GO:0016742
"hydroxymethyl-, formyl- and related transferase activity"
evidence=IEA] [GO:0004644 "phosphoribosylglycinamide
formyltransferase activity" evidence=IEA] [GO:0006189 "'de novo'
IMP biosynthetic process" evidence=IEA] [GO:0004641
"phosphoribosylformylglycinamidine cyclo-ligase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] HAMAP:MF_00138
InterPro:IPR000115 InterPro:IPR000728 InterPro:IPR002376
InterPro:IPR004607 InterPro:IPR004733 InterPro:IPR011761
InterPro:IPR013815 InterPro:IPR013816 InterPro:IPR016188
InterPro:IPR020559 InterPro:IPR020560 InterPro:IPR020562
Pfam:PF00551 Pfam:PF00586 Pfam:PF02843 Pfam:PF02844 PROSITE:PS00184
PROSITE:PS50975 InterPro:IPR016185 Pfam:PF01071 GO:GO:0005524
GO:GO:0005737 GO:GO:0046872 Gene3D:3.30.1490.20 Gene3D:3.30.470.20
Gene3D:3.40.50.20 InterPro:IPR011054 SUPFAM:SSF52440
SUPFAM:SSF51246 Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0006189
GO:GO:0009113 InterPro:IPR010918 Pfam:PF02769 SUPFAM:SSF56042
SUPFAM:SSF55326 eggNOG:COG0151 GO:GO:0004637 Gene3D:3.90.600.10
InterPro:IPR020561 TIGRFAMs:TIGR00877 GeneTree:ENSGT00390000000292
HOGENOM:HOG000030315 OMA:GETSEMP GO:GO:0004641 GO:GO:0004644
TIGRFAMs:TIGR00878 TIGRFAMs:TIGR00639 EMBL:FO080973
RefSeq:NP_509122.2 ProteinModelPortal:Q20143 SMR:Q20143
STRING:Q20143 PaxDb:Q20143 EnsemblMetazoa:F38B6.4 GeneID:180935
KEGG:cel:CELE_F38B6.4 UCSC:F38B6.4 CTD:180935 WormBase:F38B6.4
InParanoid:Q20143 NextBio:911634 Uniprot:Q20143
Length = 975
Score = 156 (60.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 35/91 (38%), Positives = 50/91 (54%)
Query: 164 ILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIE 223
ILS F+ + +INIH LLP+FKG + A + GV+++G T+HFV E +D G II
Sbjct: 875 ILSPCFISQFPSRIINIHPSLLPAFKGAHALQDALNFGVRIVGCTAHFVDELVDHGDIIA 934
Query: 224 QMVERVSHRDNLRTFVQKSEDVEKQCLAKAI 254
Q V D + T QK + E + A+
Sbjct: 935 QRPVVVEDTDTIETVRQKIQLQEHEMFPNAM 965
>TIGR_CMR|SO_2761 [details] [associations]
symbol:SO_2761 "phosphoribosylglycinamide
formyltransferase" species:211586 "Shewanella oneidensis MR-1"
[GO:0004644 "phosphoribosylglycinamide formyltransferase activity"
evidence=ISS] [GO:0009152 "purine ribonucleotide biosynthetic
process" evidence=ISS] InterPro:IPR002376 InterPro:IPR004607
Pfam:PF00551 EMBL:AE014299 GenomeReviews:AE014299_GR
Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0006189 GO:GO:0004644
TIGRFAMs:TIGR00639 HOGENOM:HOG000033575 HSSP:P08179 OMA:SNFEAIA
KO:K11175 ProtClustDB:PRK05647 RefSeq:NP_718343.1
ProteinModelPortal:Q8EDI7 SMR:Q8EDI7 GeneID:1170462
KEGG:son:SO_2761 PATRIC:23525157 Uniprot:Q8EDI7
Length = 214
Score = 137 (53.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 35/102 (34%), Positives = 48/102 (47%)
Query: 161 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 220
F IL+ F+ Y +INIH LLP F G ++A DA GA+ HFVT ELDAGP
Sbjct: 91 FMRILTNDFVNHYLGRMINIHPSLLPKFTGLNTHQRAIDAKETEHGASVHFVTPELDAGP 150
Query: 221 IIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRV 262
++ Q V D + + E +K + R+
Sbjct: 151 VVLQAKVPVYEDDTAEMLAARVHEQEHAIYPLVVKWFSHQRL 192
>TIGR_CMR|CJE_0180 [details] [associations]
symbol:CJE_0180 "phosphoribosylglycinamide
formyltransferase" species:195099 "Campylobacter jejuni RM1221"
[GO:0004644 "phosphoribosylglycinamide formyltransferase activity"
evidence=ISS] [GO:0009152 "purine ribonucleotide biosynthetic
process" evidence=ISS] InterPro:IPR002376 InterPro:IPR004607
Pfam:PF00551 EMBL:CP000025 GenomeReviews:CP000025_GR
Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0006189 GO:GO:0004644
TIGRFAMs:TIGR00639 eggNOG:COG0299 HOGENOM:HOG000033575 KO:K11175
RefSeq:YP_178204.1 ProteinModelPortal:Q5HWY1 STRING:Q5HWY1
GeneID:3230943 KEGG:cjr:CJE0180 PATRIC:20042069 OMA:IVIFASG
ProtClustDB:CLSK878682 BioCyc:CJEJ195099:GJC0-185-MONOMER
Uniprot:Q5HWY1
Length = 188
Score = 131 (51.2 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 33/96 (34%), Positives = 54/96 (56%)
Query: 161 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 220
F ILS F ++ IN+H LLP FKG K+++++ +K+ G + H+V+EELD+G
Sbjct: 93 FMRILSPVFTKNI--KAINLHPSLLPLFKGAHAIKESYESDMKVAGVSVHWVSEELDSGM 150
Query: 221 IIEQMVERVSHRDNL--RTFVQKSEDVEKQCLAKAI 254
II Q + + NL F +K +E + L ++
Sbjct: 151 IIAQ---KAFEKRNLSFEEFEEKIHSLEHEILPLSV 183
>UNIPROTKB|H7C489 [details] [associations]
symbol:GART "Trifunctional purine biosynthetic protein
adenosine-3" species:9606 "Homo sapiens" [GO:0004644
"phosphoribosylglycinamide formyltransferase activity"
evidence=IEA] [GO:0006189 "'de novo' IMP biosynthetic process"
evidence=IEA] InterPro:IPR002376 InterPro:IPR004607 Pfam:PF00551
Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0006189 GO:GO:0004644
TIGRFAMs:TIGR00639 HGNC:HGNC:4163 ChiTaRS:GART EMBL:AP000303
EMBL:AP000302 Ensembl:ENST00000414353 Ensembl:ENST00000574289
Uniprot:H7C489
Length = 223
Score = 130 (50.8 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 26/55 (47%), Positives = 34/55 (61%)
Query: 161 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEE 215
F ILSG F++ + ++NIH LLPSFKG +QA + GV + G T HFV E
Sbjct: 159 FMRILSGPFVQKWNGKMLNIHPSLLPSFKGSNAHEQALETGVTVTGCTVHFVAME 213
Score = 36 (17.7 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 18/56 (32%), Positives = 26/56 (46%)
Query: 46 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP 101
K +VAVL S L + +E +I VISN + + + + ER GIP
Sbjct: 71 KARVAVLISGTGSNLQALIDSTREPNSSAQIDIVISN--KAAVAGLDK-AERAGIP 123
>UNIPROTKB|P71554 [details] [associations]
symbol:purN "Phosphoribosylglycinamide formyltransferase"
species:1773 "Mycobacterium tuberculosis" [GO:0000287 "magnesium
ion binding" evidence=IDA] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0046653 "tetrahydrofolate metabolic
process" evidence=IDA] InterPro:IPR002376 InterPro:IPR004607
Pfam:PF00551 PROSITE:PS00373 UniPathway:UPA00074 EMBL:BX842575
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
GO:GO:0000287 Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0006189
GO:GO:0046653 GO:GO:0004644 TIGRFAMs:TIGR00639 HOGENOM:HOG000033575
OMA:FIDACGN KO:K11175 ProtClustDB:PRK05647 PIR:B70717
RefSeq:NP_215471.1 RefSeq:NP_335417.1 RefSeq:YP_006514313.1
PDB:3DA8 PDB:3DCJ PDBsum:3DA8 PDBsum:3DCJ ProteinModelPortal:P71554
SMR:P71554 PRIDE:P71554 EnsemblBacteria:EBMYCT00000001590
EnsemblBacteria:EBMYCT00000071129 GeneID:13319513 GeneID:885407
GeneID:926375 KEGG:mtc:MT0983 KEGG:mtu:Rv0956 KEGG:mtv:RVBD_0956
PATRIC:18123906 TubercuList:Rv0956 EvolutionaryTrace:P71554
Uniprot:P71554
Length = 215
Score = 134 (52.2 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 35/95 (36%), Positives = 48/95 (50%)
Query: 161 FNMILSGKFL-RSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAG 219
F IL +FL R YG+ +N H LLP+F G A GVK+ GAT H V D G
Sbjct: 98 FMRILGPQFLSRFYGR-TLNTHPALLPAFPGTHGVADALAYGVKVTGATVHLVDAGTDTG 156
Query: 220 PIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAI 254
PI+ Q V D+ T ++ + E++ L A+
Sbjct: 157 PILAQQPVPVLDGDDEETLHERIKVTERRLLVAAV 191
>FB|FBgn0000053 [details] [associations]
symbol:ade3 "adenosine 3" species:7227 "Drosophila
melanogaster" [GO:0006189 "'de novo' IMP biosynthetic process"
evidence=ISS;NAS] [GO:0004637 "phosphoribosylamine-glycine ligase
activity" evidence=ISS;NAS] [GO:0004644 "phosphoribosylglycinamide
formyltransferase activity" evidence=IEA;NAS] [GO:0004641
"phosphoribosylformylglycinamidine cyclo-ligase activity"
evidence=ISS;NAS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0009113 "purine
nucleobase biosynthetic process" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR000115 InterPro:IPR000728
InterPro:IPR001555 InterPro:IPR002376 InterPro:IPR004607
InterPro:IPR004733 InterPro:IPR011761 InterPro:IPR013815
InterPro:IPR013816 InterPro:IPR016188 InterPro:IPR020559
InterPro:IPR020560 InterPro:IPR020562 Pfam:PF00551 Pfam:PF00586
Pfam:PF02843 Pfam:PF02844 PROSITE:PS00184 PROSITE:PS00373
PROSITE:PS50975 UniPathway:UPA00074 InterPro:IPR016185 Pfam:PF01071
GO:GO:0005524 GO:GO:0005737 EMBL:AE014134 GO:GO:0046872
Gene3D:3.30.1490.20 Gene3D:3.30.470.20 Gene3D:3.40.50.20
InterPro:IPR011054 SUPFAM:SSF52440 SUPFAM:SSF51246 GO:GO:0008168
GO:GO:0032259 Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0006189
GO:GO:0009113 EMBL:J02527 InterPro:IPR010918 Pfam:PF02769
SUPFAM:SSF56042 SUPFAM:SSF55326 eggNOG:COG0151 GO:GO:0004637
Gene3D:3.90.600.10 InterPro:IPR020561 TIGRFAMs:TIGR00877 KO:K11787
GO:GO:0004641 GO:GO:0004644 TIGRFAMs:TIGR00878 TIGRFAMs:TIGR00639
EMBL:X00041 PIR:S01206 RefSeq:NP_001014477.1 RefSeq:NP_523497.2
UniGene:Dm.21459 ProteinModelPortal:P00967 SMR:P00967 STRING:P00967
PaxDb:P00967 GeneID:33986 KEGG:dme:Dmel_CG31628 CTD:33986
FlyBase:FBgn0000053 InParanoid:P00967 OrthoDB:EOG4THT80
GenomeRNAi:33986 NextBio:786281 Bgee:P00967 GermOnline:CG31628
Uniprot:P00967
Length = 1353
Score = 140 (54.3 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 33/94 (35%), Positives = 47/94 (50%)
Query: 161 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 220
F +LS F+R + ++NIH LLP + G KQA +AG K G T HFV E +D G
Sbjct: 1243 FMRVLSAPFVREWRGRLVNIHPSLLPKYPGLHVQKQALEAGEKESGCTVHFVDEGVDTGA 1302
Query: 221 IIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAI 254
II Q + D+ + Q+ E +A+
Sbjct: 1303 IIVQAAVPILPDDDEDSLTQRIHKAEHWAFPRAL 1336
Score = 48 (22.0 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 64 LYGWQEGKLPVEITCVISNHDRG 86
++GW GKL + ++ H+ G
Sbjct: 721 IFGWLAGKLKLSAQTILERHNCG 743
>UNIPROTKB|P08179 [details] [associations]
symbol:purN species:83333 "Escherichia coli K-12"
[GO:0006974 "response to DNA damage stimulus" evidence=IEP]
[GO:0009058 "biosynthetic process" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0006189 "'de novo'
IMP biosynthetic process" evidence=IEA] [GO:0032259 "methylation"
evidence=IEA] [GO:0004644 "phosphoribosylglycinamide
formyltransferase activity" evidence=IEA;IDA] [GO:0006164 "purine
nucleotide biosynthetic process" evidence=IEA] InterPro:IPR001555
InterPro:IPR002376 InterPro:IPR004607 Pfam:PF00551 PROSITE:PS00373
UniPathway:UPA00074 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0006974
GO:GO:0008168 GO:GO:0032259 Gene3D:3.40.50.170 SUPFAM:SSF53328
GO:GO:0006189 EMBL:M13747 GO:GO:0004644 TIGRFAMs:TIGR00639
eggNOG:COG0299 HOGENOM:HOG000033575 EMBL:AF293167 PIR:A28486
RefSeq:NP_416995.1 RefSeq:YP_490728.1 PDB:1C2T PDB:1C3E PDB:1CDD
PDB:1CDE PDB:1GAR PDB:1GRC PDB:1JKX PDB:2GAR PDB:3GAR PDBsum:1C2T
PDBsum:1C3E PDBsum:1CDD PDBsum:1CDE PDBsum:1GAR PDBsum:1GRC
PDBsum:1JKX PDBsum:2GAR PDBsum:3GAR ProteinModelPortal:P08179
SMR:P08179 IntAct:P08179 PRIDE:P08179
EnsemblBacteria:EBESCT00000001345 EnsemblBacteria:EBESCT00000016894
GeneID:12932446 GeneID:946973 KEGG:ecj:Y75_p2453 KEGG:eco:b2500
PATRIC:32120389 EchoBASE:EB0792 EcoGene:EG10799 KO:K11175
OMA:SSGFMRI ProtClustDB:PRK05647 BioCyc:EcoCyc:GART-MONOMER
BioCyc:ECOL316407:JW2485-MONOMER BioCyc:MetaCyc:GART-MONOMER
BindingDB:P08179 EvolutionaryTrace:P08179 Genevestigator:P08179
Uniprot:P08179
Length = 212
Score = 131 (51.2 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 33/86 (38%), Positives = 45/86 (52%)
Query: 161 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 220
F ILS F+ Y ++NIH LLP + G +QA + G + G + HFVT+ELD GP
Sbjct: 88 FMRILSPAFVSHYAGRLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGP 147
Query: 221 IIEQMVERV---SHRDNLRTFVQKSE 243
+I Q V D++ VQ E
Sbjct: 148 VILQAKVPVFAGDSEDDITARVQTQE 173
>TAIR|locus:2029554 [details] [associations]
symbol:AT1G31220 species:3702 "Arabidopsis thaliana"
[GO:0004644 "phosphoribosylglycinamide formyltransferase activity"
evidence=IEA;IGI] [GO:0006189 "'de novo' IMP biosynthetic process"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0008864 "formyltetrahydrofolate deformylase
activity" evidence=ISS] [GO:0009058 "biosynthetic process"
evidence=IEA;ISS] [GO:0009152 "purine ribonucleotide biosynthetic
process" evidence=IGI;ISS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0016742 "hydroxymethyl-, formyl- and related
transferase activity" evidence=IEA;ISS] InterPro:IPR001555
InterPro:IPR002376 InterPro:IPR004607 Pfam:PF00551 PROSITE:PS00373
UniPathway:UPA00074 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009507 EMBL:AC004793 UniGene:At.48251 UniGene:At.71214
GO:GO:0008168 GO:GO:0032259 Gene3D:3.40.50.170 SUPFAM:SSF53328
GO:GO:0006189 GO:GO:0009152 GO:GO:0004644 TIGRFAMs:TIGR00639
EMBL:X74767 EMBL:BT003877 EMBL:BT006080 IPI:IPI00523064 PIR:D86438
PIR:S37105 RefSeq:NP_174407.1 ProteinModelPortal:P52422 SMR:P52422
STRING:P52422 PaxDb:P52422 PRIDE:P52422 EnsemblPlants:AT1G31220.1
GeneID:840010 KEGG:ath:AT1G31220 TAIR:At1g31220 eggNOG:COG0299
HOGENOM:HOG000033575 InParanoid:P52422 KO:K00601 OMA:FIDACGN
PhylomeDB:P52422 ProtClustDB:PLN02331 BioCyc:ARA:AT1G31220-MONOMER
Genevestigator:P52422 GermOnline:AT1G31220 Uniprot:P52422
Length = 292
Score = 128 (50.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 31/100 (31%), Positives = 50/100 (50%)
Query: 168 KFLRSYGKDVINIHHGLLPSFKG-G----KPAKQAFDAGVKLIGATSHFVTEELDAGPII 222
+ ++++ K ++NIH LLP+F G G K K ++G + G T HFV EE D G I+
Sbjct: 173 ELVQAFPKRILNIHPALLPAFGGKGLYGIKVHKAVLESGARYSGPTIHFVNEEYDTGRIL 232
Query: 223 EQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRV 262
Q RV D ++ E + + + + CE R+
Sbjct: 233 AQSAVRVIANDTPEELAKRVLHEEHKLYVEVVGAICEERI 272
Score = 40 (19.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 6/15 (40%), Positives = 13/15 (86%)
Query: 124 DFLVLARYMQPVPLQ 138
DF++LA Y++ +P++
Sbjct: 159 DFVLLAGYLKLIPVE 173
>TIGR_CMR|BA_4004 [details] [associations]
symbol:BA_4004 "methionyl-tRNA formyltransferase"
species:198094 "Bacillus anthracis str. Ames" [GO:0004479
"methionyl-tRNA formyltransferase activity" evidence=ISS]
[GO:0006431 "methionyl-tRNA aminoacylation" evidence=ISS]
HAMAP:MF_00182 InterPro:IPR001555 InterPro:IPR002376
InterPro:IPR005793 InterPro:IPR005794 InterPro:IPR011034
Pfam:PF00551 Pfam:PF02911 PROSITE:PS00373 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR SUPFAM:SSF50486
GO:GO:0006413 GO:GO:0008168 Gene3D:3.10.25.10 Gene3D:3.40.50.170
SUPFAM:SSF53328 eggNOG:COG0223 HOGENOM:HOG000261177 KO:K00604
GO:GO:0004479 InterPro:IPR015518 PANTHER:PTHR11138
TIGRFAMs:TIGR00460 RefSeq:NP_846246.1 RefSeq:YP_020645.1
RefSeq:YP_029968.1 PDB:4IQF PDBsum:4IQF ProteinModelPortal:Q81WH2
DNASU:1086742 EnsemblBacteria:EBBACT00000011019
EnsemblBacteria:EBBACT00000014211 EnsemblBacteria:EBBACT00000024452
GeneID:1086742 GeneID:2816238 GeneID:2852995 KEGG:ban:BA_4004
KEGG:bar:GBAA_4004 KEGG:bat:BAS3717 OMA:GITLMQM
ProtClustDB:PRK00005 BioCyc:BANT260799:GJAJ-3775-MONOMER
BioCyc:BANT261594:GJ7F-3892-MONOMER Uniprot:Q81WH2
Length = 314
Score = 131 (51.2 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 30/112 (26%), Positives = 52/112 (46%)
Query: 161 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 220
F I+ + L + IN+H LLP +GG P A G + G T ++ E+LDAG
Sbjct: 88 FGQIVPNEILEAPKYGCINVHASLLPELRGGAPIHYAIMEGKEKTGITIMYMVEKLDAGD 147
Query: 221 IIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVV 272
I+ Q+ + R+ + K + L+K + + ++ P + N+ V
Sbjct: 148 ILTQVEVEIEERETTGSLFDKLSEAGAHLLSKTVPLLIQGKLEPIKQNEEEV 199
>TIGR_CMR|CBU_1737 [details] [associations]
symbol:CBU_1737 "phosphoribosylglycinamide
formyltransferase" species:227377 "Coxiella burnetii RSA 493"
[GO:0004644 "phosphoribosylglycinamide formyltransferase activity"
evidence=ISS] [GO:0009152 "purine ribonucleotide biosynthetic
process" evidence=ISS] InterPro:IPR001555 InterPro:IPR002376
InterPro:IPR004607 Pfam:PF00551 PROSITE:PS00373 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0008168 GO:GO:0032259
Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0006189 GO:GO:0004644
TIGRFAMs:TIGR00639 HOGENOM:HOG000033575 OMA:SNFEAIA KO:K11175
ProtClustDB:PRK05647 RefSeq:NP_820717.1 PDB:3TQR PDBsum:3TQR
ProteinModelPortal:Q83AY9 SMR:Q83AY9 GeneID:1209648
KEGG:cbu:CBU_1737 PATRIC:17932217
BioCyc:CBUR227377:GJ7S-1711-MONOMER Uniprot:Q83AY9
Length = 215
Score = 123 (48.4 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 34/104 (32%), Positives = 52/104 (50%)
Query: 167 GK-FLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQM 225
GK F+ Y +INIH LLP + G ++A AG G + H+VTE+LDAGP+I Q
Sbjct: 97 GKAFVSHYSGRMINIHPSLLPKYTGLNTHERALAAGETEHGVSVHYVTEDLDAGPLICQA 156
Query: 226 VERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNK 269
++ +D T + +E + + + R L Y N+
Sbjct: 157 RLSITPQDTPETLKTRVHALEHIIYPEVLSWFAAGR-LNYHNNQ 199
>UNIPROTKB|Q97TA1 [details] [associations]
symbol:purN "Phosphoribosylglycinamide formyltransferase"
species:170187 "Streptococcus pneumoniae TIGR4" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002376
InterPro:IPR004607 Pfam:PF00551 EMBL:AE005672
GenomeReviews:AE005672_GR Gene3D:3.40.50.170 SUPFAM:SSF53328
GO:GO:0006189 GO:GO:0004644 TIGRFAMs:TIGR00639 HOGENOM:HOG000033575
HSSP:P08179 OMA:SNFEAIA KO:K11175 ProtClustDB:PRK05647 PIR:D95005
RefSeq:NP_344597.1 ProteinModelPortal:Q97TA1
EnsemblBacteria:EBSTRT00000026402 GeneID:929798 KEGG:spn:SP_0048
PATRIC:19704423 Uniprot:Q97TA1
Length = 181
Score = 118 (46.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 28/94 (29%), Positives = 49/94 (52%)
Query: 164 ILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIE 223
I+ L +Y ++NIH LP F G + A++AGV G T H+V +D G +I+
Sbjct: 85 IVGPTLLSAYEGRIVNIHPAYLPEFPGAHGIEDAWNAGVGQSGVTIHWVDSGVDTGQVIK 144
Query: 224 QM-VERVSHRDNLRTFVQKSEDVEKQCLAKAIKS 256
Q+ V R++ D + F + + E + + +K+
Sbjct: 145 QVRVPRLAD-DTIDRFEARIHEAEYRLYPEVVKA 177
>TIGR_CMR|SPO_2168 [details] [associations]
symbol:SPO_2168 "phosphoribosylglycinamide
formyltransferase" species:246200 "Ruegeria pomeroyi DSS-3"
[GO:0004644 "phosphoribosylglycinamide formyltransferase activity"
evidence=ISS] [GO:0009152 "purine ribonucleotide biosynthetic
process" evidence=ISS] InterPro:IPR002376 InterPro:IPR004607
Pfam:PF00551 EMBL:CP000031 GenomeReviews:CP000031_GR
Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0006189 GO:GO:0004644
TIGRFAMs:TIGR00639 HOGENOM:HOG000033575 OMA:SNFEAIA KO:K11175
RefSeq:YP_167395.1 ProteinModelPortal:Q5LRG0 GeneID:3193498
KEGG:sil:SPO2168 PATRIC:23377683 ProtClustDB:CLSK933785
Uniprot:Q5LRG0
Length = 198
Score = 110 (43.8 bits), Expect = 0.00022, P = 0.00022
Identities = 29/81 (35%), Positives = 38/81 (46%)
Query: 161 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 220
F +L+ F + ++NIH LLP +KG +A AG G T H VT ELD GP
Sbjct: 91 FMRVLTAGFTDRFQGRMLNIHPSLLPKYKGLHTHARALAAGDTEHGCTVHEVTSELDDGP 150
Query: 221 IIEQMVERVSHRDNLRTFVQK 241
I+ Q V D T +
Sbjct: 151 ILGQARVAVEPGDTPETLAAR 171
>TAIR|locus:2029012 [details] [associations]
symbol:pde194 "pigment defective 194" species:3702
"Arabidopsis thaliana" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0008864 "formyltetrahydrofolate deformylase
activity" evidence=ISS] [GO:0009058 "biosynthetic process"
evidence=IEA;ISS] [GO:0009152 "purine ribonucleotide biosynthetic
process" evidence=ISS] [GO:0016742 "hydroxymethyl-, formyl- and
related transferase activity" evidence=IEA;ISS] HAMAP:MF_00182
InterPro:IPR002376 InterPro:IPR005793 InterPro:IPR005794
InterPro:IPR011034 Pfam:PF00551 Pfam:PF02911 EMBL:CP002684
SUPFAM:SSF50486 GO:GO:0006413 Gene3D:3.10.25.10 Gene3D:3.40.50.170
SUPFAM:SSF53328 EMBL:AC074025 KO:K00604 GO:GO:0004479
InterPro:IPR015518 PANTHER:PTHR11138 OMA:FDKITPK HSSP:P23882
UniGene:At.26432 UniGene:At.35761 IPI:IPI00536070 PIR:H96690
RefSeq:NP_176825.1 ProteinModelPortal:Q9C712 SMR:Q9C712
STRING:Q9C712 PRIDE:Q9C712 EnsemblPlants:AT1G66520.1 GeneID:842970
KEGG:ath:AT1G66520 TAIR:At1g66520 InParanoid:Q9C712
PhylomeDB:Q9C712 ProtClustDB:PLN02285 Genevestigator:Q9C712
Uniprot:Q9C712
Length = 355
Score = 115 (45.5 bits), Expect = 0.00025, P = 0.00025
Identities = 24/62 (38%), Positives = 34/62 (54%)
Query: 161 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 220
+ IL KFL+ +NIH LLP ++G P ++A GV G + F +LDAGP
Sbjct: 120 YGNILPTKFLKIPVHGTVNIHPSLLPLYRGAAPVQRALQDGVPETGVSLAFTVRKLDAGP 179
Query: 221 II 222
+I
Sbjct: 180 VI 181
>TIGR_CMR|CJE_1515 [details] [associations]
symbol:CJE_1515 "formyltransferase, putative"
species:195099 "Campylobacter jejuni RM1221" [GO:0009058
"biosynthetic process" evidence=ISS] [GO:0016742 "hydroxymethyl-,
formyl- and related transferase activity" evidence=ISS]
InterPro:IPR002376 Pfam:PF00551 GO:GO:0009058 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0016742 Gene3D:3.40.50.170
SUPFAM:SSF53328 eggNOG:COG0223 InterPro:IPR015518 PANTHER:PTHR11138
RefSeq:YP_179500.1 ProteinModelPortal:Q5HT85 STRING:Q5HT85
GeneID:3232146 KEGG:cjr:CJE1515 PATRIC:20044822
BioCyc:CJEJ195099:GJC0-1543-MONOMER Uniprot:Q5HT85
Length = 123
Score = 94 (38.1 bits), Expect = 0.00028, P = 0.00028
Identities = 25/109 (22%), Positives = 46/109 (42%)
Query: 161 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 220
F+ I + L+ Y + +IN H G LP ++ A K G + HF+ + ++ G
Sbjct: 7 FDQIFKEELLKLYPRKIINCHAGKLPFYRDRNILNWALINDEKEFGISVHFIDKGINTGD 66
Query: 221 IIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNK 269
II Q + D+ T + L +++ + E V Y+ +
Sbjct: 67 IILQKTYEIKDSDDYTTLLNLCHKECASLLYESLILFLEDNVKAYKQKR 115
>UNIPROTKB|P64134 [details] [associations]
symbol:fmt "Methionyl-tRNA formyltransferase" species:1773
"Mycobacterium tuberculosis" [GO:0040007 "growth" evidence=IMP]
HAMAP:MF_00182 InterPro:IPR002376 InterPro:IPR005793
InterPro:IPR005794 InterPro:IPR011034 Pfam:PF00551 Pfam:PF02911
PROSITE:PS00373 GO:GO:0040007 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR SUPFAM:SSF50486
GO:GO:0006413 EMBL:BX842576 GO:GO:0008168 Gene3D:3.10.25.10
Gene3D:3.40.50.170 SUPFAM:SSF53328 eggNOG:COG0223
HOGENOM:HOG000261177 KO:K00604 GO:GO:0004479 InterPro:IPR015518
PANTHER:PTHR11138 TIGRFAMs:TIGR00460 OMA:GITLMQM
ProtClustDB:PRK00005 PIR:C70901 RefSeq:NP_215922.1
RefSeq:NP_335901.1 RefSeq:YP_006514786.1 ProteinModelPortal:P64134
SMR:P64134 PRIDE:P64134 EnsemblBacteria:EBMYCT00000003750
EnsemblBacteria:EBMYCT00000072178 GeneID:13319995 GeneID:886706
GeneID:924522 KEGG:mtc:MT1450 KEGG:mtu:Rv1406 KEGG:mtv:RVBD_1406
PATRIC:18124958 TubercuList:Rv1406 Uniprot:P64134
Length = 312
Score = 110 (43.8 bits), Expect = 0.00074, P = 0.00073
Identities = 26/104 (25%), Positives = 47/104 (45%)
Query: 161 FNMILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGP 220
+ +L G L +N+H LLP+++G P + A AG + GAT+ + LD+GP
Sbjct: 88 YGALLGGPLLAVPPHGWVNLHFSLLPAWRGAAPVQAAIAAGDTITGATTFQIEPSLDSGP 147
Query: 221 IIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLP 264
I + E + D +++ L+ + + R+ P
Sbjct: 148 IYGVVTEVIQPTDTAGDLLKRLAVSGAALLSTTLDGIADQRLTP 191
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.140 0.427 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 273 243 0.00097 113 3 11 22 0.37 33
32 0.45 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 53
No. of states in DFA: 604 (64 KB)
Total size of DFA: 198 KB (2112 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.66u 0.14s 17.80t Elapsed: 00:00:01
Total cpu time: 17.66u 0.14s 17.80t Elapsed: 00:00:01
Start: Sat May 11 09:05:28 2013 End: Sat May 11 09:05:29 2013