Query 024065
Match_columns 273
No_of_seqs 386 out of 1165
Neff 11.9
Searched_HMMs 46136
Date Fri Mar 29 08:41:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024065.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024065hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02965 Probable pheophorbida 100.0 8.3E-41 1.8E-45 250.8 23.1 249 10-267 4-254 (255)
2 PLN02824 hydrolase, alpha/beta 100.0 3.9E-39 8.6E-44 246.9 20.8 249 6-265 26-293 (294)
3 PRK00870 haloalkane dehalogena 100.0 7.2E-39 1.6E-43 246.1 20.6 249 8-266 45-301 (302)
4 TIGR02240 PHA_depoly_arom poly 100.0 4.2E-38 9E-43 239.0 20.2 245 6-268 22-268 (276)
5 PRK03592 haloalkane dehalogena 100.0 1.4E-37 3E-42 238.4 20.7 257 5-268 24-291 (295)
6 KOG4178 Soluble epoxide hydrol 100.0 3.5E-37 7.6E-42 225.1 19.9 252 7-267 42-321 (322)
7 PLN02679 hydrolase, alpha/beta 100.0 3.6E-37 7.8E-42 240.9 21.3 247 9-267 88-358 (360)
8 PRK03204 haloalkane dehalogena 100.0 5.2E-37 1.1E-41 233.3 20.8 252 5-264 31-286 (286)
9 PLN02211 methyl indole-3-aceta 100.0 2.7E-36 5.9E-41 227.2 23.8 246 8-265 17-269 (273)
10 PRK10349 carboxylesterase BioH 100.0 1.3E-36 2.9E-41 228.5 20.0 240 5-265 9-255 (256)
11 TIGR03343 biphenyl_bphD 2-hydr 100.0 2.6E-36 5.7E-41 230.3 21.3 249 5-265 27-282 (282)
12 TIGR03056 bchO_mg_che_rel puta 100.0 9.9E-36 2.1E-40 226.8 21.9 246 8-264 27-278 (278)
13 PRK10673 acyl-CoA esterase; Pr 100.0 1.3E-35 2.9E-40 223.2 22.2 239 8-265 15-254 (255)
14 PLN03084 alpha/beta hydrolase 100.0 2.9E-35 6.2E-40 229.0 21.9 249 8-265 126-383 (383)
15 PLN03087 BODYGUARD 1 domain co 100.0 5.8E-35 1.2E-39 231.5 22.5 252 9-266 201-479 (481)
16 PLN02578 hydrolase 100.0 5.8E-36 1.3E-40 234.0 16.3 251 5-264 83-353 (354)
17 PLN02385 hydrolase; alpha/beta 100.0 1.9E-35 4.1E-40 231.1 18.6 245 8-268 86-347 (349)
18 TIGR03611 RutD pyrimidine util 100.0 5.3E-35 1.1E-39 220.3 20.2 242 7-264 11-256 (257)
19 KOG1454 Predicted hydrolase/ac 100.0 2.9E-35 6.2E-40 224.2 17.1 251 7-267 56-325 (326)
20 PRK06489 hypothetical protein; 100.0 1.2E-34 2.5E-39 227.3 19.0 247 9-267 69-358 (360)
21 TIGR01738 bioH putative pimelo 100.0 3.3E-34 7.3E-39 214.3 19.2 239 6-263 1-245 (245)
22 PRK11126 2-succinyl-6-hydroxy- 100.0 3.3E-34 7.2E-39 213.9 18.7 232 8-265 1-241 (242)
23 PHA02857 monoglyceride lipase; 100.0 1.2E-33 2.5E-38 214.9 20.3 238 8-266 24-273 (276)
24 TIGR02427 protocat_pcaD 3-oxoa 100.0 3.4E-34 7.3E-39 215.0 15.6 239 8-264 12-251 (251)
25 PF12697 Abhydrolase_6: Alpha/ 100.0 7E-35 1.5E-39 215.5 10.2 227 12-258 1-228 (228)
26 PLN02298 hydrolase, alpha/beta 100.0 3E-33 6.5E-38 217.5 18.0 242 8-269 58-320 (330)
27 PRK08775 homoserine O-acetyltr 100.0 2.8E-33 6E-38 218.3 17.0 252 5-268 53-341 (343)
28 PRK10749 lysophospholipase L2; 100.0 7E-33 1.5E-37 214.8 18.3 248 8-266 53-329 (330)
29 KOG4409 Predicted hydrolase/ac 100.0 5.9E-33 1.3E-37 203.7 16.4 252 7-266 88-364 (365)
30 TIGR01250 pro_imino_pep_2 prol 100.0 2E-32 4.3E-37 209.6 19.6 246 9-264 25-288 (288)
31 TIGR03695 menH_SHCHC 2-succiny 100.0 2E-32 4.3E-37 205.3 18.5 244 9-264 1-251 (251)
32 PRK07581 hypothetical protein; 100.0 1.6E-33 3.4E-38 219.8 12.8 253 9-267 41-337 (339)
33 PLN02894 hydrolase, alpha/beta 100.0 1.4E-31 3E-36 211.5 19.4 252 8-268 104-387 (402)
34 PRK14875 acetoin dehydrogenase 100.0 2.8E-31 6.1E-36 210.3 18.2 237 8-265 130-370 (371)
35 TIGR01392 homoserO_Ac_trn homo 100.0 3.6E-32 7.8E-37 212.7 12.7 248 8-264 30-351 (351)
36 PLN02652 hydrolase; alpha/beta 100.0 8.1E-31 1.8E-35 205.5 20.2 244 6-268 133-389 (395)
37 PRK00175 metX homoserine O-ace 100.0 1.9E-31 4E-36 210.1 14.9 255 9-268 48-376 (379)
38 KOG1455 Lysophospholipase [Lip 100.0 2E-30 4.3E-35 187.0 16.6 244 7-266 52-312 (313)
39 COG2267 PldB Lysophospholipase 100.0 1.1E-29 2.3E-34 192.0 19.8 243 10-268 35-296 (298)
40 PLN02980 2-oxoglutarate decarb 100.0 2.4E-30 5.2E-35 232.8 17.5 247 8-268 1370-1641(1655)
41 COG1647 Esterase/lipase [Gener 100.0 7.4E-30 1.6E-34 175.2 15.4 222 9-265 15-243 (243)
42 PLN02511 hydrolase 100.0 1.6E-30 3.4E-35 204.8 12.5 249 7-268 98-367 (388)
43 TIGR01249 pro_imino_pep_1 prol 100.0 1.2E-29 2.7E-34 195.0 16.8 105 8-114 26-131 (306)
44 KOG2382 Predicted alpha/beta h 100.0 1.7E-29 3.7E-34 185.1 15.5 249 7-267 50-314 (315)
45 PRK05855 short chain dehydroge 100.0 4.7E-29 1E-33 208.8 15.8 253 8-267 24-293 (582)
46 TIGR01607 PST-A Plasmodium sub 100.0 2.4E-27 5.3E-32 183.3 17.0 237 8-265 20-332 (332)
47 KOG2984 Predicted hydrolase [G 100.0 5.9E-29 1.3E-33 168.1 6.3 235 5-266 38-276 (277)
48 PRK10985 putative hydrolase; P 100.0 2.7E-27 5.8E-32 183.1 15.0 247 8-267 57-321 (324)
49 PRK06765 homoserine O-acetyltr 99.9 4.6E-27 1E-31 183.6 14.9 256 8-265 55-387 (389)
50 PRK05077 frsA fermentation/res 99.9 9.2E-26 2E-30 178.5 21.9 217 8-266 193-412 (414)
51 TIGR03100 hydr1_PEP hydrolase, 99.9 7E-26 1.5E-30 171.0 17.5 233 8-265 25-274 (274)
52 TIGR01838 PHA_synth_I poly(R)- 99.9 3.5E-25 7.7E-30 177.6 17.6 239 8-253 187-462 (532)
53 PRK11071 esterase YqiA; Provis 99.9 9.1E-25 2E-29 155.2 17.9 184 10-264 2-189 (190)
54 PRK13604 luxD acyl transferase 99.9 1.5E-24 3.3E-29 161.0 18.2 201 8-249 36-247 (307)
55 PF00561 Abhydrolase_1: alpha/ 99.9 2.3E-27 4.9E-32 175.8 2.8 219 37-260 1-229 (230)
56 TIGR01836 PHA_synth_III_C poly 99.9 1E-24 2.2E-29 170.6 17.0 250 9-265 62-349 (350)
57 PRK10566 esterase; Provisional 99.9 6.2E-24 1.3E-28 159.1 17.6 204 8-266 26-248 (249)
58 PLN02872 triacylglycerol lipas 99.9 7.9E-24 1.7E-28 165.5 16.1 259 8-269 73-392 (395)
59 PRK07868 acyl-CoA synthetase; 99.9 1.4E-23 3E-28 183.6 18.3 255 8-268 66-363 (994)
60 KOG2564 Predicted acetyltransf 99.9 4.6E-24 1E-28 151.7 10.1 104 8-112 73-181 (343)
61 COG0596 MhpC Predicted hydrola 99.9 2.6E-22 5.7E-27 151.8 20.1 246 9-264 21-280 (282)
62 PF12695 Abhydrolase_5: Alpha/ 99.9 2.3E-22 5.1E-27 138.1 15.3 144 11-246 1-145 (145)
63 KOG4667 Predicted esterase [Li 99.9 2.5E-21 5.4E-26 132.7 15.1 219 9-264 33-256 (269)
64 KOG1552 Predicted alpha/beta h 99.9 1.1E-20 2.5E-25 134.1 16.3 190 9-269 60-255 (258)
65 COG3208 GrsT Predicted thioest 99.9 3.2E-21 7E-26 136.0 13.4 225 8-265 6-235 (244)
66 PRK11460 putative hydrolase; P 99.9 9.4E-21 2E-25 139.3 16.1 175 6-263 13-209 (232)
67 TIGR03101 hydr2_PEP hydrolase, 99.9 2.5E-21 5.5E-26 143.3 12.6 105 9-114 25-135 (266)
68 PF06342 DUF1057: Alpha/beta h 99.9 6.5E-20 1.4E-24 132.0 17.9 112 6-119 32-143 (297)
69 COG0429 Predicted hydrolase of 99.9 5E-21 1.1E-25 140.6 11.1 238 8-267 74-341 (345)
70 KOG4391 Predicted alpha/beta h 99.8 8E-21 1.7E-25 130.4 9.3 200 8-268 77-284 (300)
71 KOG1838 Alpha/beta hydrolase [ 99.8 3.4E-19 7.5E-24 135.7 16.3 247 8-266 124-388 (409)
72 PLN02442 S-formylglutathione h 99.8 1.8E-18 3.8E-23 131.1 19.1 106 7-113 45-178 (283)
73 PF00326 Peptidase_S9: Prolyl 99.8 5E-19 1.1E-23 129.3 13.4 194 25-268 3-211 (213)
74 TIGR02821 fghA_ester_D S-formy 99.8 6.8E-18 1.5E-22 127.7 19.8 106 8-113 41-173 (275)
75 PLN00021 chlorophyllase 99.8 3.1E-18 6.6E-23 130.4 16.3 104 8-112 51-165 (313)
76 COG2021 MET2 Homoserine acetyl 99.8 9.8E-19 2.1E-23 130.8 12.7 254 9-265 51-367 (368)
77 PF02230 Abhydrolase_2: Phosph 99.8 3.6E-18 7.7E-23 124.7 13.0 180 5-266 10-215 (216)
78 PF00975 Thioesterase: Thioest 99.8 9.4E-18 2E-22 124.1 14.9 221 10-263 1-229 (229)
79 TIGR01839 PHA_synth_II poly(R) 99.8 2.3E-17 4.9E-22 131.7 16.7 235 8-249 214-484 (560)
80 TIGR01840 esterase_phb esteras 99.8 2.2E-17 4.7E-22 120.3 15.3 106 8-113 12-130 (212)
81 TIGR03230 lipo_lipase lipoprot 99.8 6.1E-18 1.3E-22 132.6 12.2 108 8-116 40-157 (442)
82 COG1506 DAP2 Dipeptidyl aminop 99.8 2.1E-17 4.5E-22 137.9 15.5 208 10-268 395-618 (620)
83 PF03096 Ndr: Ndr family; Int 99.8 3.9E-17 8.4E-22 119.4 14.5 240 8-265 22-278 (283)
84 TIGR01849 PHB_depoly_PhaZ poly 99.8 1.1E-16 2.5E-21 124.1 17.4 247 9-265 102-405 (406)
85 PF01738 DLH: Dienelactone hyd 99.8 1.1E-16 2.3E-21 117.3 16.3 178 8-266 13-217 (218)
86 PF06821 Ser_hydrolase: Serine 99.8 2.8E-17 6.1E-22 114.0 12.4 158 12-254 1-161 (171)
87 KOG2931 Differentiation-relate 99.7 3.7E-16 8.1E-21 112.7 17.3 236 8-266 45-306 (326)
88 PF06500 DUF1100: Alpha/beta h 99.7 3.4E-16 7.3E-21 120.5 15.2 217 7-265 188-408 (411)
89 cd00707 Pancreat_lipase_like P 99.7 4.2E-17 9.1E-22 122.6 10.0 109 7-116 34-150 (275)
90 PF10230 DUF2305: Uncharacteri 99.7 1.3E-15 2.9E-20 113.8 16.3 113 9-121 2-130 (266)
91 PRK10162 acetyl esterase; Prov 99.7 4E-15 8.7E-20 114.8 18.7 106 8-114 80-196 (318)
92 COG0400 Predicted esterase [Ge 99.7 1.5E-15 3.3E-20 107.7 13.7 173 6-265 15-204 (207)
93 COG2945 Predicted hydrolase of 99.7 5.1E-15 1.1E-19 100.4 14.8 173 8-264 27-205 (210)
94 KOG2565 Predicted hydrolases o 99.7 1.5E-15 3.2E-20 113.0 13.2 102 8-110 151-261 (469)
95 PF08538 DUF1749: Protein of u 99.7 1.5E-15 3.2E-20 112.3 11.6 103 8-118 32-153 (303)
96 PF05728 UPF0227: Uncharacteri 99.7 2.1E-14 4.5E-19 100.7 16.7 181 12-263 2-186 (187)
97 TIGR00976 /NonD putative hydro 99.7 1.1E-14 2.4E-19 120.5 17.9 104 8-113 21-132 (550)
98 COG4757 Predicted alpha/beta h 99.7 3.8E-15 8.3E-20 103.8 12.2 233 11-263 32-280 (281)
99 PF05448 AXE1: Acetyl xylan es 99.6 9.7E-15 2.1E-19 111.5 15.2 211 8-265 82-319 (320)
100 COG3319 Thioesterase domains o 99.6 1.6E-14 3.4E-19 105.7 14.2 101 10-114 1-104 (257)
101 COG0412 Dienelactone hydrolase 99.6 8.4E-14 1.8E-18 102.1 17.8 176 10-267 28-234 (236)
102 COG3243 PhaC Poly(3-hydroxyalk 99.6 1.8E-14 3.9E-19 109.6 13.3 234 8-251 106-375 (445)
103 PRK10252 entF enterobactin syn 99.6 2.2E-14 4.8E-19 130.8 15.5 100 9-112 1068-1170(1296)
104 TIGR03502 lipase_Pla1_cef extr 99.6 7.2E-15 1.6E-19 122.5 11.0 90 9-98 449-575 (792)
105 PF12146 Hydrolase_4: Putative 99.6 7.6E-15 1.6E-19 87.8 6.5 65 8-72 15-79 (79)
106 PF02273 Acyl_transf_2: Acyl t 99.6 6.7E-13 1.4E-17 93.7 16.2 206 7-249 28-240 (294)
107 COG3571 Predicted hydrolase of 99.5 3.4E-12 7.4E-17 84.1 17.4 184 6-266 11-211 (213)
108 PRK10115 protease 2; Provision 99.5 5.9E-13 1.3E-17 112.3 17.3 106 8-113 444-559 (686)
109 COG3458 Acetyl esterase (deace 99.5 4.7E-14 1E-18 100.9 9.1 209 9-266 83-317 (321)
110 COG3545 Predicted esterase of 99.5 1.4E-12 3E-17 87.6 14.7 174 9-266 2-179 (181)
111 PF09752 DUF2048: Uncharacteri 99.5 1.6E-12 3.4E-17 97.8 16.1 239 7-264 90-347 (348)
112 PF12740 Chlorophyllase2: Chlo 99.5 1.3E-12 2.8E-17 95.1 14.3 103 9-112 17-130 (259)
113 PF07859 Abhydrolase_3: alpha/ 99.5 9.8E-13 2.1E-17 96.1 12.2 94 12-113 1-110 (211)
114 PF07819 PGAP1: PGAP1-like pro 99.5 9.8E-13 2.1E-17 95.8 11.8 105 8-116 3-126 (225)
115 PF06028 DUF915: Alpha/beta hy 99.5 5.1E-12 1.1E-16 93.0 15.4 204 8-264 10-253 (255)
116 KOG2624 Triglyceride lipase-ch 99.5 3.6E-12 7.9E-17 99.1 15.1 257 7-267 71-399 (403)
117 KOG2551 Phospholipase/carboxyh 99.5 6.4E-12 1.4E-16 87.7 14.6 60 205-265 162-223 (230)
118 PRK05371 x-prolyl-dipeptidyl a 99.4 1E-11 2.2E-16 105.7 17.7 84 27-112 270-372 (767)
119 PF03959 FSH1: Serine hydrolas 99.4 1.2E-12 2.7E-17 94.9 9.8 163 8-251 3-206 (212)
120 PF07224 Chlorophyllase: Chlor 99.4 1.1E-11 2.4E-16 88.6 12.9 106 5-112 43-156 (307)
121 PF10503 Esterase_phd: Esteras 99.4 2.4E-11 5.2E-16 87.4 14.3 106 8-113 15-132 (220)
122 PF02129 Peptidase_S15: X-Pro 99.4 1.5E-11 3.3E-16 93.1 12.8 108 6-115 17-138 (272)
123 KOG3975 Uncharacterized conser 99.4 5.7E-11 1.2E-15 84.2 13.6 245 5-263 25-300 (301)
124 PTZ00472 serine carboxypeptida 99.4 2.7E-11 5.8E-16 97.6 13.7 107 7-114 75-217 (462)
125 PF06057 VirJ: Bacterial virul 99.3 9.5E-11 2.1E-15 80.8 13.0 97 10-112 3-106 (192)
126 KOG4627 Kynurenine formamidase 99.3 1.9E-11 4.2E-16 84.0 8.8 196 7-263 65-268 (270)
127 KOG1515 Arylacetamide deacetyl 99.3 1E-09 2.2E-14 83.9 18.9 221 8-265 89-334 (336)
128 KOG3043 Predicted hydrolase re 99.3 4.6E-11 1E-15 83.4 10.4 172 11-266 41-240 (242)
129 smart00824 PKS_TE Thioesterase 99.3 8.9E-11 1.9E-15 85.7 12.6 97 14-114 2-103 (212)
130 COG0657 Aes Esterase/lipase [L 99.3 5.5E-10 1.2E-14 86.5 17.5 103 8-114 78-192 (312)
131 PF11339 DUF3141: Protein of u 99.3 4.1E-10 9E-15 88.4 15.5 80 28-114 93-176 (581)
132 PF01674 Lipase_2: Lipase (cla 99.2 8.9E-12 1.9E-16 89.4 4.7 100 9-111 1-107 (219)
133 PF03403 PAF-AH_p_II: Platelet 99.2 2.1E-10 4.6E-15 90.0 12.8 105 8-113 99-262 (379)
134 PRK04940 hypothetical protein; 99.2 3.7E-09 8.1E-14 72.9 15.8 170 12-264 2-178 (180)
135 PF08840 BAAT_C: BAAT / Acyl-C 99.2 1.7E-10 3.6E-15 83.7 9.8 50 64-114 6-57 (213)
136 PLN02733 phosphatidylcholine-s 99.2 6.3E-11 1.4E-15 94.1 8.1 93 20-114 105-202 (440)
137 COG4188 Predicted dienelactone 99.2 4.8E-11 1E-15 90.3 6.9 93 9-101 71-182 (365)
138 PF00151 Lipase: Lipase; Inte 99.2 5.4E-11 1.2E-15 91.4 6.4 111 7-118 69-192 (331)
139 KOG2112 Lysophospholipase [Lip 99.2 4.2E-10 9E-15 78.2 10.0 176 9-265 3-203 (206)
140 KOG2100 Dipeptidyl aminopeptid 99.2 1.4E-09 3.1E-14 92.5 14.7 199 9-265 526-746 (755)
141 PF12715 Abhydrolase_7: Abhydr 99.1 1.1E-09 2.4E-14 83.7 11.1 103 8-111 114-258 (390)
142 PF05990 DUF900: Alpha/beta hy 99.1 1.5E-09 3.3E-14 79.7 10.1 108 7-114 16-138 (233)
143 KOG2281 Dipeptidyl aminopeptid 99.0 5E-09 1.1E-13 84.2 11.8 206 6-265 639-866 (867)
144 KOG3847 Phospholipase A2 (plat 98.9 2.6E-08 5.6E-13 73.5 11.0 105 8-113 117-275 (399)
145 PF00450 Peptidase_S10: Serine 98.9 3.8E-08 8.2E-13 79.6 12.5 107 7-114 38-182 (415)
146 PF03583 LIP: Secretory lipase 98.9 1.1E-07 2.4E-12 72.4 13.7 45 205-249 218-267 (290)
147 PLN02606 palmitoyl-protein thi 98.9 3.4E-07 7.4E-12 68.3 15.6 103 8-114 25-133 (306)
148 PF04301 DUF452: Protein of un 98.9 6.7E-08 1.5E-12 68.8 11.1 81 8-114 10-91 (213)
149 COG4814 Uncharacterized protei 98.9 4.9E-07 1.1E-11 64.9 15.3 104 10-113 46-176 (288)
150 KOG4840 Predicted hydrolases o 98.8 6.7E-08 1.5E-12 67.8 10.4 102 9-114 36-145 (299)
151 KOG1551 Uncharacterized conser 98.8 2E-08 4.3E-13 72.3 7.4 218 27-267 132-367 (371)
152 COG1075 LipA Predicted acetylt 98.8 1.7E-08 3.7E-13 78.4 7.3 102 9-114 59-165 (336)
153 COG4099 Predicted peptidase [G 98.8 3.7E-08 8E-13 72.2 8.3 99 10-112 192-303 (387)
154 PF05057 DUF676: Putative seri 98.8 5.3E-08 1.1E-12 71.0 8.5 87 9-97 4-97 (217)
155 PF05677 DUF818: Chlamydia CHL 98.8 6.6E-08 1.4E-12 72.6 9.0 90 7-100 135-237 (365)
156 KOG3253 Predicted alpha/beta h 98.8 2.2E-07 4.8E-12 74.6 12.4 175 9-266 176-374 (784)
157 COG3509 LpqC Poly(3-hydroxybut 98.7 2.8E-07 6E-12 67.9 10.8 105 8-113 60-179 (312)
158 PF12048 DUF3530: Protein of u 98.7 4.7E-06 1E-10 64.1 18.0 110 5-114 83-230 (310)
159 PF05705 DUF829: Eukaryotic pr 98.7 8.3E-07 1.8E-11 66.1 13.5 58 206-263 178-240 (240)
160 KOG1553 Predicted alpha/beta h 98.7 9.1E-08 2E-12 71.6 7.2 105 5-112 239-344 (517)
161 PRK10439 enterobactin/ferric e 98.6 2.7E-06 5.8E-11 68.0 15.3 106 8-113 208-323 (411)
162 PLN02633 palmitoyl protein thi 98.6 4.4E-06 9.6E-11 62.6 14.8 101 9-113 25-131 (314)
163 COG4782 Uncharacterized protei 98.6 4.5E-07 9.7E-12 68.7 9.6 105 8-112 115-233 (377)
164 PF08386 Abhydrolase_4: TAP-li 98.6 3E-07 6.6E-12 58.4 7.2 62 206-267 34-95 (103)
165 PF05577 Peptidase_S28: Serine 98.6 7E-07 1.5E-11 72.5 10.7 106 9-114 29-149 (434)
166 PF00756 Esterase: Putative es 98.5 2.9E-07 6.3E-12 69.1 6.8 107 7-113 22-150 (251)
167 PF10340 DUF2424: Protein of u 98.5 1.1E-05 2.3E-10 62.6 15.0 106 7-115 120-237 (374)
168 COG2936 Predicted acyl esteras 98.5 6.4E-06 1.4E-10 67.0 13.8 107 8-114 44-160 (563)
169 COG1073 Hydrolases of the alph 98.5 1.8E-06 4E-11 66.4 10.5 60 207-266 233-297 (299)
170 PF02450 LCAT: Lecithin:choles 98.4 1.3E-06 2.8E-11 69.6 8.0 82 24-114 66-161 (389)
171 KOG3724 Negative regulator of 98.4 3.8E-06 8.2E-11 69.8 9.7 103 8-114 88-221 (973)
172 PLN02209 serine carboxypeptida 98.4 2.6E-05 5.7E-10 62.8 14.1 59 206-265 351-434 (437)
173 PLN03016 sinapoylglucose-malat 98.3 2.3E-05 4.9E-10 63.1 13.3 60 206-266 347-431 (433)
174 COG3150 Predicted esterase [Ge 98.3 6.9E-06 1.5E-10 55.3 7.8 88 12-113 2-91 (191)
175 PF02089 Palm_thioest: Palmito 98.2 2.3E-06 5E-11 63.5 5.2 106 8-114 4-117 (279)
176 KOG2541 Palmitoyl protein thio 98.1 3.7E-05 8.1E-10 56.0 9.0 101 10-114 24-129 (296)
177 COG4553 DepA Poly-beta-hydroxy 98.1 0.00051 1.1E-08 50.9 14.8 104 9-116 103-212 (415)
178 PF10142 PhoPQ_related: PhoPQ- 98.1 4.6E-05 1E-09 59.4 10.1 150 76-267 170-321 (367)
179 cd00312 Esterase_lipase Estera 98.1 1.3E-05 2.7E-10 66.5 7.5 106 7-114 93-214 (493)
180 KOG3101 Esterase D [General fu 98.1 5.6E-06 1.2E-10 57.9 4.3 110 5-114 40-177 (283)
181 KOG3967 Uncharacterized conser 98.0 8.4E-05 1.8E-09 52.3 9.3 105 8-113 100-227 (297)
182 PF11144 DUF2920: Protein of u 98.0 0.00063 1.4E-08 53.3 15.0 63 206-268 293-370 (403)
183 COG1770 PtrB Protease II [Amin 98.0 0.00043 9.4E-09 57.1 14.3 106 9-114 448-563 (682)
184 KOG1282 Serine carboxypeptidas 97.9 0.001 2.2E-08 53.6 14.9 60 207-266 364-448 (454)
185 PF07082 DUF1350: Protein of u 97.8 0.00023 5E-09 51.8 9.0 91 11-111 19-123 (250)
186 KOG2183 Prolylcarboxypeptidase 97.8 0.00013 2.8E-09 56.6 7.7 105 9-113 80-202 (492)
187 COG0627 Predicted esterase [Ge 97.8 0.0001 2.2E-09 56.6 7.1 110 7-116 52-190 (316)
188 cd00741 Lipase Lipase. Lipase 97.8 7.2E-05 1.6E-09 51.5 5.6 38 76-113 26-67 (153)
189 KOG2182 Hydrolytic enzymes of 97.8 0.00022 4.8E-09 56.8 8.5 108 7-114 84-208 (514)
190 KOG2237 Predicted serine prote 97.7 0.0004 8.7E-09 57.0 9.6 103 9-113 470-584 (712)
191 PLN02517 phosphatidylcholine-s 97.6 0.00012 2.5E-09 60.0 5.6 85 23-113 156-263 (642)
192 PF00135 COesterase: Carboxyle 97.6 0.00029 6.2E-09 59.2 7.9 107 8-114 124-246 (535)
193 COG3946 VirJ Type IV secretory 97.6 0.0004 8.6E-09 53.9 7.7 88 9-102 260-350 (456)
194 PF06259 Abhydrolase_8: Alpha/ 97.6 0.0019 4.2E-08 45.1 10.4 107 8-114 18-145 (177)
195 PF01764 Lipase_3: Lipase (cla 97.6 0.0002 4.4E-09 48.5 5.2 37 61-98 48-84 (140)
196 PF11187 DUF2974: Protein of u 97.5 0.00047 1E-08 50.4 6.6 46 67-114 75-124 (224)
197 KOG2369 Lecithin:cholesterol a 97.5 0.00023 4.9E-09 56.4 5.2 87 23-112 124-224 (473)
198 COG2272 PnbA Carboxylesterase 97.4 0.00094 2E-08 53.5 7.7 107 7-114 92-218 (491)
199 COG2830 Uncharacterized protei 97.4 0.0016 3.5E-08 43.8 7.5 81 8-114 10-91 (214)
200 KOG2521 Uncharacterized conser 97.3 0.01 2.3E-07 46.1 12.2 63 206-268 225-292 (350)
201 COG2819 Predicted hydrolase of 97.2 0.00059 1.3E-08 50.3 4.8 50 65-114 122-173 (264)
202 PF01083 Cutinase: Cutinase; 97.2 0.0014 3.1E-08 46.2 6.4 53 61-114 65-123 (179)
203 KOG1202 Animal-type fatty acid 97.1 0.0022 4.7E-08 56.9 7.7 96 7-112 2121-2218(2376)
204 PF11288 DUF3089: Protein of u 97.1 0.001 2.3E-08 47.5 4.9 69 30-99 40-116 (207)
205 cd00519 Lipase_3 Lipase (class 97.1 0.00096 2.1E-08 49.4 5.0 32 67-99 118-149 (229)
206 PLN02162 triacylglycerol lipas 97.0 0.0017 3.6E-08 52.0 5.8 36 61-97 262-297 (475)
207 PLN00413 triacylglycerol lipas 97.0 0.0022 4.7E-08 51.5 6.0 35 62-97 269-303 (479)
208 COG1505 Serine proteases of th 96.9 0.01 2.2E-07 48.9 9.0 104 9-112 421-534 (648)
209 COG2939 Carboxypeptidase C (ca 96.7 0.0083 1.8E-07 48.4 7.3 105 8-113 100-236 (498)
210 PLN02571 triacylglycerol lipas 96.7 0.0027 5.8E-08 50.4 4.5 38 61-98 208-246 (413)
211 PLN02454 triacylglycerol lipas 96.7 0.0032 6.9E-08 49.9 4.8 34 64-98 213-248 (414)
212 COG2382 Fes Enterochelin ester 96.7 0.0041 9E-08 46.7 5.1 53 61-113 156-212 (299)
213 PF05277 DUF726: Protein of un 96.6 0.0036 7.9E-08 48.6 4.4 40 75-114 217-261 (345)
214 PLN02408 phospholipase A1 96.5 0.0044 9.5E-08 48.5 4.3 37 63-99 184-221 (365)
215 PLN02934 triacylglycerol lipas 96.3 0.0058 1.3E-07 49.6 4.4 36 61-97 305-340 (515)
216 COG4287 PqaA PhoPQ-activated p 96.3 0.0065 1.4E-07 46.9 4.2 60 206-268 329-389 (507)
217 KOG1516 Carboxylesterase and r 96.3 0.015 3.2E-07 49.2 6.7 105 9-113 112-232 (545)
218 PLN02213 sinapoylglucose-malat 96.2 0.019 4.1E-07 44.8 6.7 59 206-265 233-316 (319)
219 PLN02310 triacylglycerol lipas 96.2 0.013 2.8E-07 46.5 5.6 37 62-98 190-229 (405)
220 PF05576 Peptidase_S37: PS-10 96.2 0.005 1.1E-07 48.4 3.2 105 6-112 60-168 (448)
221 KOG4372 Predicted alpha/beta h 96.2 0.012 2.6E-07 46.2 5.2 85 9-95 80-167 (405)
222 PLN02324 triacylglycerol lipas 96.1 0.0084 1.8E-07 47.6 4.2 36 63-98 199-235 (415)
223 PF06850 PHB_depo_C: PHB de-po 96.0 0.015 3.3E-07 40.8 4.7 60 206-265 134-201 (202)
224 COG4947 Uncharacterized protei 96.0 0.0067 1.5E-07 41.5 2.7 105 6-113 23-136 (227)
225 PLN02802 triacylglycerol lipas 95.9 0.013 2.8E-07 47.7 4.5 37 62-98 313-350 (509)
226 PF09949 DUF2183: Uncharacteri 95.9 0.12 2.5E-06 32.5 7.7 85 23-108 11-97 (100)
227 PLN03037 lipase class 3 family 95.8 0.013 2.9E-07 47.7 4.2 37 62-98 299-338 (525)
228 PLN02753 triacylglycerol lipas 95.7 0.015 3.4E-07 47.4 4.2 36 62-97 292-331 (531)
229 PLN02719 triacylglycerol lipas 95.7 0.017 3.6E-07 47.1 4.2 36 63-98 279-318 (518)
230 PF04083 Abhydro_lipase: Parti 95.5 0.012 2.7E-07 33.3 2.2 19 7-25 41-59 (63)
231 PLN02213 sinapoylglucose-malat 95.4 0.05 1.1E-06 42.5 5.9 77 37-113 2-96 (319)
232 PF07519 Tannase: Tannase and 95.2 0.079 1.7E-06 43.8 6.8 83 29-113 53-150 (474)
233 PLN02761 lipase class 3 family 95.2 0.029 6.4E-07 45.8 4.2 36 62-97 273-313 (527)
234 PLN02847 triacylglycerol lipas 95.1 0.04 8.7E-07 45.8 4.6 29 69-98 243-271 (633)
235 KOG4569 Predicted lipase [Lipi 95.1 0.038 8.3E-07 43.4 4.4 37 61-98 155-191 (336)
236 PF08237 PE-PPE: PE-PPE domain 94.7 0.17 3.7E-06 37.3 6.7 64 36-99 2-69 (225)
237 KOG1283 Serine carboxypeptidas 94.5 0.089 1.9E-06 40.1 4.8 105 8-114 30-167 (414)
238 KOG2029 Uncharacterized conser 92.9 0.18 4E-06 41.9 4.3 48 65-112 511-571 (697)
239 PRK12467 peptide synthase; Pro 92.6 1 2.2E-05 47.8 10.0 102 9-114 3692-3796(3956)
240 COG5153 CVT17 Putative lipase 91.1 0.32 6.9E-06 36.6 3.5 35 66-100 264-298 (425)
241 KOG4540 Putative lipase essent 91.1 0.32 6.9E-06 36.6 3.5 35 66-100 264-298 (425)
242 KOG2385 Uncharacterized conser 90.6 0.48 1E-05 38.8 4.3 41 75-115 444-489 (633)
243 PF07519 Tannase: Tannase and 88.1 0.96 2.1E-05 37.6 4.6 66 206-271 353-432 (474)
244 cd01714 ETF_beta The electron 87.1 3.7 8E-05 29.8 6.6 69 31-109 71-145 (202)
245 KOG4388 Hormone-sensitive lipa 86.8 5.1 0.00011 33.9 7.8 96 9-111 396-506 (880)
246 PRK02399 hypothetical protein; 85.7 18 0.00038 29.4 10.1 99 10-108 4-127 (406)
247 COG1448 TyrB Aspartate/tyrosin 85.5 7.3 0.00016 31.1 7.7 86 9-111 171-263 (396)
248 PF06792 UPF0261: Uncharacteri 85.1 19 0.00041 29.3 10.3 99 10-108 2-125 (403)
249 PF06309 Torsin: Torsin; Inte 83.8 5 0.00011 26.5 5.3 30 7-36 50-81 (127)
250 PF09994 DUF2235: Uncharacteri 82.9 11 0.00025 28.9 7.9 89 10-98 2-112 (277)
251 PF03610 EIIA-man: PTS system 82.8 10 0.00023 24.5 8.1 74 11-96 2-76 (116)
252 COG0529 CysC Adenylylsulfate k 81.2 16 0.00035 25.9 7.2 36 8-43 21-58 (197)
253 PRK05579 bifunctional phosphop 81.0 21 0.00045 29.2 9.0 71 9-85 116-196 (399)
254 cd07225 Pat_PNPLA6_PNPLA7 Pata 79.9 3.1 6.8E-05 32.4 4.0 63 23-99 2-64 (306)
255 COG2939 Carboxypeptidase C (ca 79.8 2.3 5E-05 35.1 3.3 59 206-265 425-490 (498)
256 TIGR00521 coaBC_dfp phosphopan 78.6 26 0.00057 28.6 8.9 72 10-85 113-193 (390)
257 cd07198 Patatin Patatin-like p 77.8 4.3 9.3E-05 28.5 3.9 33 67-100 16-48 (172)
258 cd07207 Pat_ExoU_VipD_like Exo 77.6 4.3 9.3E-05 29.1 4.0 33 67-100 17-49 (194)
259 cd03818 GT1_ExpC_like This fam 77.4 18 0.00038 29.4 7.9 38 12-51 2-39 (396)
260 PRK10279 hypothetical protein; 77.0 4.2 9.2E-05 31.6 3.9 33 67-100 23-55 (300)
261 PF00448 SRP54: SRP54-type pro 76.2 24 0.00052 25.5 7.4 74 26-109 73-148 (196)
262 cd07227 Pat_Fungal_NTE1 Fungal 75.9 5 0.00011 30.6 4.0 32 67-99 28-59 (269)
263 PF00698 Acyl_transf_1: Acyl t 75.6 2.5 5.3E-05 33.2 2.4 29 67-96 74-102 (318)
264 PRK11613 folP dihydropteroate 75.5 20 0.00043 27.7 7.0 58 26-92 166-225 (282)
265 COG3933 Transcriptional antite 75.4 25 0.00054 28.9 7.7 73 9-94 109-181 (470)
266 smart00827 PKS_AT Acyl transfe 75.3 4.3 9.4E-05 31.4 3.7 29 68-97 73-101 (298)
267 COG1752 RssA Predicted esteras 75.1 4.9 0.00011 31.4 3.9 33 67-100 29-61 (306)
268 cd07210 Pat_hypo_W_succinogene 75.1 6.1 0.00013 29.2 4.2 32 68-100 19-50 (221)
269 TIGR03131 malonate_mdcH malona 74.5 4.8 0.0001 31.2 3.8 30 67-97 66-95 (295)
270 PF00326 Peptidase_S9: Prolyl 74.1 8.5 0.00019 28.0 4.8 63 8-73 143-208 (213)
271 TIGR03707 PPK2_P_aer polyphosp 73.6 20 0.00043 26.7 6.5 72 8-91 29-102 (230)
272 PF01583 APS_kinase: Adenylyls 73.4 10 0.00022 26.3 4.6 36 9-44 1-38 (156)
273 COG3340 PepE Peptidase E [Amin 72.0 16 0.00034 26.7 5.4 36 9-44 32-70 (224)
274 TIGR03709 PPK2_rel_1 polyphosp 71.8 16 0.00036 27.8 5.8 70 9-90 55-126 (264)
275 cd07228 Pat_NTE_like_bacteria 70.7 7.7 0.00017 27.3 3.8 31 69-100 20-50 (175)
276 cd07209 Pat_hypo_Ecoli_Z1214_l 69.9 8.3 0.00018 28.3 3.9 33 67-100 16-48 (215)
277 TIGR00128 fabD malonyl CoA-acy 69.3 6.8 0.00015 30.2 3.6 29 68-97 73-102 (290)
278 PF03205 MobB: Molybdopterin g 68.2 15 0.00033 24.8 4.6 42 11-52 1-44 (140)
279 PF05576 Peptidase_S37: PS-10 67.9 5.3 0.00011 32.3 2.6 57 206-264 351-412 (448)
280 PF10081 Abhydrolase_9: Alpha/ 67.9 9.7 0.00021 29.1 3.8 52 62-113 91-147 (289)
281 cd07205 Pat_PNPLA6_PNPLA7_NTE1 67.6 12 0.00025 26.4 4.2 31 68-99 19-49 (175)
282 cd07230 Pat_TGL4-5_like Triacy 66.6 4 8.8E-05 33.4 1.9 37 67-104 91-127 (421)
283 PRK14729 miaA tRNA delta(2)-is 65.6 37 0.00081 26.5 6.7 75 10-86 4-101 (300)
284 COG3727 Vsr DNA G:T-mismatch r 65.6 18 0.00038 24.0 4.2 34 9-42 57-114 (150)
285 PRK14974 cell division protein 65.5 65 0.0014 25.7 8.1 66 34-109 220-287 (336)
286 PF02230 Abhydrolase_2: Phosph 64.5 23 0.00051 25.8 5.4 56 9-72 155-213 (216)
287 cd00006 PTS_IIA_man PTS_IIA, P 64.3 38 0.00081 22.2 7.8 71 11-93 3-73 (122)
288 KOG1200 Mitochondrial/plastidi 63.9 51 0.0011 24.0 6.5 33 11-45 15-47 (256)
289 COG0541 Ffh Signal recognition 63.5 46 0.00099 27.5 6.9 49 61-110 198-248 (451)
290 TIGR01425 SRP54_euk signal rec 63.0 88 0.0019 26.0 8.6 71 29-109 175-247 (429)
291 PF08433 KTI12: Chromatin asso 63.0 18 0.00038 27.8 4.5 38 11-48 2-41 (270)
292 COG2240 PdxK Pyridoxal/pyridox 63.0 35 0.00076 26.2 6.0 95 15-117 11-117 (281)
293 COG3673 Uncharacterized conser 62.9 75 0.0016 25.2 8.4 89 9-97 31-141 (423)
294 PRK05282 (alpha)-aspartyl dipe 62.8 37 0.00079 25.4 6.0 38 8-45 30-70 (233)
295 PF12242 Eno-Rase_NADH_b: NAD( 62.8 14 0.0003 21.9 3.0 26 75-100 37-62 (78)
296 PF03976 PPK2: Polyphosphate k 62.7 9.3 0.0002 28.4 3.0 71 8-91 29-102 (228)
297 PF11713 Peptidase_C80: Peptid 62.6 4.2 9.1E-05 28.1 1.1 48 43-90 60-116 (157)
298 PRK07313 phosphopantothenoylcy 62.3 31 0.00068 24.6 5.5 59 9-72 113-179 (182)
299 KOG0781 Signal recognition par 62.2 59 0.0013 27.3 7.4 86 14-109 443-538 (587)
300 cd07232 Pat_PLPL Patain-like p 62.1 5.5 0.00012 32.5 1.8 39 67-106 85-123 (407)
301 cd07208 Pat_hypo_Ecoli_yjju_li 62.1 15 0.00032 28.0 4.1 34 68-102 17-51 (266)
302 PF04084 ORC2: Origin recognit 61.8 80 0.0017 25.1 8.1 77 13-91 57-150 (326)
303 PF14253 AbiH: Bacteriophage a 61.5 8.1 0.00017 29.4 2.6 22 69-90 226-247 (270)
304 PF03853 YjeF_N: YjeF-related 61.4 19 0.00041 25.3 4.2 35 8-42 24-58 (169)
305 cd07229 Pat_TGL3_like Triacylg 60.7 6.7 0.00014 31.7 2.0 39 68-107 102-140 (391)
306 COG0279 GmhA Phosphoheptose is 59.9 17 0.00037 25.3 3.5 73 13-90 44-121 (176)
307 PHA02114 hypothetical protein 59.5 17 0.00037 22.5 3.1 32 11-42 84-115 (127)
308 COG1506 DAP2 Dipeptidyl aminop 59.0 44 0.00095 29.3 6.8 43 8-50 550-595 (620)
309 cd07231 Pat_SDP1-like Sugar-De 59.0 6.7 0.00014 30.6 1.7 35 67-102 86-120 (323)
310 KOG4231 Intracellular membrane 58.6 8.6 0.00019 32.0 2.3 54 33-99 413-471 (763)
311 cd07212 Pat_PNPLA9 Patatin-lik 57.3 20 0.00043 28.2 4.1 20 81-100 35-54 (312)
312 PF10605 3HBOH: 3HB-oligomer h 56.9 12 0.00026 32.0 2.9 34 80-113 287-321 (690)
313 TIGR02816 pfaB_fam PfaB family 56.9 15 0.00033 31.3 3.6 31 68-99 255-286 (538)
314 cd05312 NAD_bind_1_malic_enz N 56.6 51 0.0011 25.5 5.9 81 12-96 27-124 (279)
315 PF05724 TPMT: Thiopurine S-me 56.1 18 0.00039 26.7 3.5 30 10-44 38-67 (218)
316 COG4850 Uncharacterized conser 55.6 52 0.0011 25.9 5.8 98 11-112 215-314 (373)
317 COG0218 Predicted GTPase [Gene 55.0 19 0.00041 26.1 3.3 56 206-265 135-198 (200)
318 PF04244 DPRP: Deoxyribodipyri 54.9 36 0.00078 25.3 4.9 48 25-83 51-98 (224)
319 COG1576 Uncharacterized conser 54.5 45 0.00098 23.0 4.8 56 28-95 60-115 (155)
320 PF03283 PAE: Pectinacetyleste 53.7 46 0.001 26.8 5.6 38 74-111 152-193 (361)
321 PRK08762 molybdopterin biosynt 53.4 1E+02 0.0022 25.1 7.6 34 76-112 134-168 (376)
322 cd07224 Pat_like Patatin-like 53.2 26 0.00057 26.1 4.0 32 68-100 18-51 (233)
323 PF02590 SPOUT_MTase: Predicte 53.0 20 0.00043 24.8 3.1 44 36-89 67-110 (155)
324 COG4822 CbiK Cobalamin biosynt 52.3 93 0.002 22.9 7.1 37 9-45 138-176 (265)
325 PRK00103 rRNA large subunit me 52.0 47 0.001 23.1 4.8 41 38-88 69-109 (157)
326 PRK00726 murG undecaprenyldiph 51.7 80 0.0017 25.1 6.9 34 12-45 5-38 (357)
327 PF14359 DUF4406: Domain of un 50.6 59 0.0013 20.1 6.8 68 23-100 16-86 (92)
328 PRK13256 thiopurine S-methyltr 50.5 20 0.00043 26.6 3.0 28 12-44 46-73 (226)
329 PRK06731 flhF flagellar biosyn 50.2 1.2E+02 0.0025 23.4 8.4 72 28-109 145-219 (270)
330 cd08769 DAP_dppA_2 Peptidase M 49.5 76 0.0016 24.4 5.9 53 206-264 147-201 (270)
331 cd07206 Pat_TGL3-4-5_SDP1 Tria 49.2 26 0.00056 27.3 3.5 28 76-103 95-122 (298)
332 TIGR03712 acc_sec_asp2 accesso 49.2 1.6E+02 0.0036 24.9 12.6 87 8-99 288-378 (511)
333 PF08484 Methyltransf_14: C-me 49.0 35 0.00077 23.7 3.9 52 60-111 50-102 (160)
334 COG0159 TrpA Tryptophan syntha 48.9 1E+02 0.0022 23.6 6.4 66 9-90 95-161 (265)
335 TIGR03708 poly_P_AMP_trns poly 48.5 93 0.002 26.4 6.7 73 8-92 38-112 (493)
336 KOG2872 Uroporphyrinogen decar 48.4 28 0.00061 26.8 3.4 29 10-45 253-281 (359)
337 cd04951 GT1_WbdM_like This fam 48.4 1.3E+02 0.0029 23.6 8.9 35 12-46 3-39 (360)
338 TIGR01361 DAHP_synth_Bsub phos 48.0 1.2E+02 0.0027 23.1 8.4 72 8-88 131-206 (260)
339 PTZ00317 NADP-dependent malic 47.7 55 0.0012 28.1 5.3 79 13-94 300-398 (559)
340 COG3887 Predicted signaling pr 47.7 1.5E+02 0.0032 25.9 7.6 104 5-112 254-377 (655)
341 cd07204 Pat_PNPLA_like Patatin 46.9 37 0.00081 25.5 4.0 21 80-100 33-53 (243)
342 PRK00091 miaA tRNA delta(2)-is 46.8 72 0.0016 25.1 5.6 73 9-83 3-99 (307)
343 COG2452 Predicted site-specifi 46.7 1E+02 0.0022 22.1 5.7 55 9-74 115-169 (193)
344 PF13207 AAA_17: AAA domain; P 46.5 37 0.0008 21.8 3.6 37 12-50 1-40 (121)
345 KOG1209 1-Acyl dihydroxyaceton 46.1 43 0.00093 24.7 3.9 36 9-45 6-41 (289)
346 KOG0780 Signal recognition par 45.8 1.4E+02 0.003 24.5 6.9 61 31-101 178-238 (483)
347 PF13439 Glyco_transf_4: Glyco 45.7 95 0.0021 21.1 5.9 30 17-46 10-39 (177)
348 PF01656 CbiA: CobQ/CobB/MinD/ 45.6 45 0.00098 23.6 4.2 32 13-44 2-35 (195)
349 PF09419 PGP_phosphatase: Mito 45.5 96 0.0021 21.9 5.5 53 32-88 36-88 (168)
350 TIGR02363 dhaK1 dihydroxyaceto 45.2 90 0.0019 24.8 5.8 35 8-42 252-291 (329)
351 PF03033 Glyco_transf_28: Glyc 44.8 34 0.00073 22.7 3.3 34 12-45 2-35 (139)
352 PF13478 XdhC_C: XdhC Rossmann 44.7 64 0.0014 21.7 4.5 30 14-46 2-31 (136)
353 PRK06849 hypothetical protein; 44.4 95 0.0021 25.3 6.3 73 9-86 4-85 (389)
354 TIGR00824 EIIA-man PTS system, 44.3 87 0.0019 20.3 7.4 71 11-93 4-74 (116)
355 PLN02748 tRNA dimethylallyltra 43.9 1.1E+02 0.0023 25.9 6.4 76 9-86 21-120 (468)
356 PRK11468 dihydroxyacetone kina 43.7 98 0.0021 24.9 5.8 34 8-41 275-313 (356)
357 COG1763 MobB Molybdopterin-gua 43.4 70 0.0015 22.4 4.6 39 10-48 2-42 (161)
358 cd07218 Pat_iPLA2 Calcium-inde 43.3 42 0.00091 25.3 3.8 21 80-100 32-52 (245)
359 COG1092 Predicted SAM-dependen 42.9 69 0.0015 26.2 5.1 50 37-89 291-340 (393)
360 PRK04148 hypothetical protein; 42.9 75 0.0016 21.4 4.5 43 63-110 4-46 (134)
361 PLN03050 pyridoxine (pyridoxam 42.6 62 0.0013 24.5 4.6 34 10-43 61-94 (246)
362 PF13714 PEP_mutase: Phosphoen 42.6 1.4E+02 0.0029 22.6 6.3 65 16-84 78-142 (238)
363 PF09370 TIM-br_sig_trns: TIM- 41.8 40 0.00086 25.7 3.4 78 27-107 161-244 (268)
364 cd07221 Pat_PNPLA3 Patatin-lik 41.6 48 0.001 25.2 3.9 22 79-100 33-54 (252)
365 PRK04435 hypothetical protein; 41.6 1.1E+02 0.0025 20.9 5.4 76 9-85 68-146 (147)
366 PRK14481 dihydroxyacetone kina 41.4 1.2E+02 0.0025 24.2 5.9 34 8-41 251-289 (331)
367 PF01075 Glyco_transf_9: Glyco 41.3 51 0.0011 24.6 4.1 36 8-43 104-144 (247)
368 PRK13982 bifunctional SbtC-lik 41.2 1.9E+02 0.0041 24.6 7.4 59 9-72 180-247 (475)
369 PRK13398 3-deoxy-7-phosphohept 40.8 1.7E+02 0.0036 22.6 7.7 94 8-110 133-232 (266)
370 TIGR03586 PseI pseudaminic aci 40.7 1.9E+02 0.0041 23.1 9.3 83 8-100 133-216 (327)
371 cd07220 Pat_PNPLA2 Patatin-lik 40.1 52 0.0011 24.9 3.9 22 79-100 37-58 (249)
372 cd01819 Patatin_and_cPLA2 Pata 40.0 56 0.0012 22.5 3.8 19 78-96 28-46 (155)
373 PRK06490 glutamine amidotransf 39.9 1.6E+02 0.0035 22.1 7.7 82 9-95 8-102 (239)
374 KOG1411 Aspartate aminotransfe 39.7 54 0.0012 26.2 3.9 86 10-111 198-290 (427)
375 TIGR03708 poly_P_AMP_trns poly 39.3 1.1E+02 0.0023 26.1 5.8 70 8-90 297-369 (493)
376 cd07217 Pat17_PNPLA8_PNPLA9_li 39.3 28 0.00062 27.8 2.5 18 81-98 44-61 (344)
377 PRK03363 fixB putative electro 39.2 1.8E+02 0.004 23.0 6.7 60 30-99 42-103 (313)
378 KOG3062 RNA polymerase II elon 39.2 1.7E+02 0.0036 22.1 7.2 38 11-48 2-43 (281)
379 TIGR00246 tRNA_RlmH_YbeA rRNA 39.1 63 0.0014 22.3 3.8 9 38-46 67-75 (153)
380 PRK14581 hmsF outer membrane N 38.8 52 0.0011 29.1 4.1 77 8-85 47-142 (672)
381 COG0859 RfaF ADP-heptose:LPS h 38.7 70 0.0015 25.4 4.6 35 9-43 175-215 (334)
382 PF14252 DUF4347: Domain of un 38.5 1.3E+02 0.0027 21.2 5.3 52 22-89 9-60 (165)
383 cd01983 Fer4_NifH The Fer4_Nif 38.4 75 0.0016 19.0 4.0 18 26-43 17-34 (99)
384 PRK10751 molybdopterin-guanine 37.8 1.3E+02 0.0028 21.3 5.3 41 9-49 5-47 (173)
385 PF01734 Patatin: Patatin-like 37.8 45 0.00097 23.4 3.2 23 76-98 25-47 (204)
386 PF14606 Lipase_GDSL_3: GDSL-l 37.7 80 0.0017 22.5 4.2 22 25-48 24-45 (178)
387 cd08770 DAP_dppA_3 Peptidase M 37.6 1.4E+02 0.0031 22.9 5.7 53 206-264 147-200 (263)
388 cd07213 Pat17_PNPLA8_PNPLA9_li 37.5 31 0.00067 26.7 2.4 20 80-99 36-55 (288)
389 cd00401 AdoHcyase S-adenosyl-L 37.5 2.1E+02 0.0046 23.7 7.1 66 26-107 75-140 (413)
390 PLN02496 probable phosphopanto 37.3 1.7E+02 0.0036 21.6 6.4 61 9-73 132-199 (209)
391 PF04763 DUF562: Protein of un 37.1 1.2E+02 0.0026 20.5 4.5 38 9-46 17-61 (146)
392 PF14488 DUF4434: Domain of un 37.1 1.5E+02 0.0032 20.9 5.5 55 20-74 17-77 (166)
393 PRK13397 3-deoxy-7-phosphohept 36.8 1.9E+02 0.0041 22.0 8.0 40 8-47 121-160 (250)
394 cd07211 Pat_PNPLA8 Patatin-lik 36.4 31 0.00067 27.0 2.3 17 81-97 44-60 (308)
395 cd07222 Pat_PNPLA4 Patatin-lik 36.3 60 0.0013 24.5 3.7 23 80-103 33-55 (246)
396 PRK13255 thiopurine S-methyltr 36.1 56 0.0012 24.1 3.5 15 30-44 53-67 (218)
397 PF00091 Tubulin: Tubulin/FtsZ 36.0 97 0.0021 22.8 4.7 26 64-90 111-136 (216)
398 PF10686 DUF2493: Protein of u 35.9 77 0.0017 18.5 3.3 10 10-19 32-41 (71)
399 cd08663 DAP_dppA_1 Peptidase M 35.8 1.7E+02 0.0036 22.6 5.9 53 206-264 147-201 (266)
400 PF03358 FMN_red: NADPH-depend 35.8 36 0.00078 23.1 2.3 36 12-47 3-42 (152)
401 TIGR00067 glut_race glutamate 35.8 1.1E+02 0.0024 23.3 5.0 45 222-266 11-56 (251)
402 PRK11460 putative hydrolase; P 35.7 1.2E+02 0.0025 22.6 5.2 39 9-47 148-189 (232)
403 COG0331 FabD (acyl-carrier-pro 35.7 45 0.00097 26.2 3.0 22 76-97 83-104 (310)
404 COG4088 Predicted nucleotide k 35.5 47 0.001 24.5 2.8 34 11-44 2-37 (261)
405 PRK00889 adenylylsulfate kinas 35.5 1.1E+02 0.0025 21.3 4.9 36 9-44 3-40 (175)
406 PF09664 DUF2399: Protein of u 35.4 88 0.0019 21.6 4.1 33 7-41 39-71 (152)
407 PF02633 Creatininase: Creatin 35.4 1.2E+02 0.0025 22.8 5.1 69 26-96 43-119 (237)
408 COG1255 Uncharacterized protei 35.3 48 0.001 21.6 2.5 22 24-45 24-45 (129)
409 PF03490 Varsurf_PPLC: Variant 35.2 40 0.00088 17.9 1.8 26 58-84 6-31 (51)
410 cd03785 GT1_MurG MurG is an N- 35.1 2E+02 0.0044 22.6 6.8 32 13-44 2-35 (350)
411 PRK07933 thymidylate kinase; V 35.0 1.3E+02 0.0028 22.1 5.2 39 12-50 2-42 (213)
412 TIGR00959 ffh signal recogniti 34.9 2.7E+02 0.0059 23.3 8.7 72 28-109 174-247 (428)
413 KOG0736 Peroxisome assembly fa 34.8 2.8E+02 0.006 25.4 7.5 72 37-112 765-843 (953)
414 PRK14483 DhaKLM operon coactiv 34.6 1.1E+02 0.0025 24.3 5.0 35 8-42 251-290 (329)
415 TIGR02362 dhaK1b probable dihy 34.6 1.1E+02 0.0025 24.3 5.0 35 7-41 247-286 (326)
416 KOG2170 ATPase of the AAA+ sup 34.4 72 0.0016 25.0 3.8 30 7-36 107-138 (344)
417 PRK13529 malate dehydrogenase; 34.0 2E+02 0.0043 25.0 6.5 80 12-95 297-400 (563)
418 PRK11889 flhF flagellar biosyn 33.4 2.9E+02 0.0062 23.1 8.2 76 24-109 307-385 (436)
419 KOG1502 Flavonol reductase/cin 33.4 67 0.0014 25.5 3.6 32 9-42 5-36 (327)
420 TIGR00176 mobB molybdopterin-g 33.3 1.1E+02 0.0023 21.2 4.3 36 13-48 2-39 (155)
421 TIGR02113 coaC_strep phosphopa 33.1 1.6E+02 0.0034 21.0 5.2 34 9-44 112-150 (177)
422 COG3621 Patatin [General funct 33.0 91 0.002 24.8 4.1 52 37-100 9-64 (394)
423 PF01012 ETF: Electron transfe 32.9 1.7E+02 0.0036 20.2 7.6 62 28-99 50-113 (164)
424 TIGR03840 TMPT_Se_Te thiopurin 32.7 67 0.0014 23.6 3.4 15 30-44 50-64 (213)
425 COG2230 Cfa Cyclopropane fatty 32.5 1.3E+02 0.0028 23.4 4.9 47 63-110 57-105 (283)
426 PRK00771 signal recognition pa 32.4 3E+02 0.0066 23.1 9.7 36 9-44 94-131 (437)
427 PLN02840 tRNA dimethylallyltra 32.4 1.9E+02 0.0042 24.1 6.1 30 56-85 88-118 (421)
428 PRK00865 glutamate racemase; P 32.3 1.2E+02 0.0027 23.1 4.9 56 206-264 5-61 (261)
429 cd00281 DAP_dppA Peptidase M55 32.1 2.1E+02 0.0045 22.1 5.8 52 206-263 146-199 (265)
430 TIGR03702 lip_kinase_YegS lipi 32.1 2.4E+02 0.0053 21.9 7.2 31 11-41 2-32 (293)
431 COG0324 MiaA tRNA delta(2)-iso 31.8 1.9E+02 0.004 22.9 5.7 77 9-87 2-102 (308)
432 TIGR00421 ubiX_pad polyprenyl 31.8 1.9E+02 0.0042 20.6 6.7 59 9-74 112-171 (181)
433 PRK11320 prpB 2-methylisocitra 31.7 2.5E+02 0.0055 22.0 7.5 65 16-84 87-155 (292)
434 PRK10964 ADP-heptose:LPS hepto 31.7 79 0.0017 24.9 3.9 13 251-263 308-320 (322)
435 COG2326 Uncharacterized conser 31.2 2.4E+02 0.0053 21.6 5.9 68 8-87 72-141 (270)
436 TIGR00682 lpxK tetraacyldisacc 31.0 1.7E+02 0.0037 23.2 5.5 43 9-52 27-73 (311)
437 TIGR03607 patatin-related prot 31.0 79 0.0017 28.4 4.0 33 64-97 50-85 (739)
438 PRK10867 signal recognition pa 30.9 3.2E+02 0.007 22.9 9.2 70 29-108 176-247 (433)
439 TIGR02764 spore_ybaN_pdaB poly 30.4 2E+02 0.0044 20.5 6.1 31 12-45 99-129 (191)
440 PF08496 Peptidase_S49_N: Pept 30.4 92 0.002 21.6 3.5 48 37-91 98-145 (155)
441 COG0482 TrmU Predicted tRNA(5- 30.4 2.4E+02 0.0051 22.9 6.1 59 9-74 4-62 (356)
442 COG4667 Predicted esterase of 30.4 62 0.0013 24.8 2.8 30 78-107 39-69 (292)
443 cd07216 Pat17_PNPLA8_PNPLA9_li 30.0 38 0.00081 26.6 1.8 17 81-97 45-61 (309)
444 PRK14569 D-alanyl-alanine synt 30.0 1.4E+02 0.0029 23.3 4.9 36 9-44 3-43 (296)
445 cd01715 ETF_alpha The electron 29.8 2E+02 0.0042 20.1 5.8 61 30-100 45-107 (168)
446 TIGR03569 NeuB_NnaB N-acetylne 29.8 2.9E+02 0.0064 22.1 7.4 91 9-110 133-227 (329)
447 PRK14582 pgaB outer membrane N 29.7 69 0.0015 28.4 3.4 76 8-84 47-141 (671)
448 cd01523 RHOD_Lact_B Member of 29.7 1.2E+02 0.0027 18.6 3.9 27 8-38 61-87 (100)
449 PF06792 UPF0261: Uncharacteri 29.7 1.6E+02 0.0034 24.3 5.1 43 8-50 183-225 (403)
450 PRK13938 phosphoheptose isomer 29.7 1.4E+02 0.0031 21.6 4.6 25 76-100 44-68 (196)
451 PF12641 Flavodoxin_3: Flavodo 29.5 2E+02 0.0043 20.1 5.8 61 206-266 39-99 (160)
452 cd05007 SIS_Etherase N-acetylm 29.4 1E+02 0.0023 23.4 4.0 32 70-101 42-73 (257)
453 PRK09273 hypothetical protein; 29.3 2.4E+02 0.0051 20.9 7.9 76 24-110 18-94 (211)
454 PF15566 Imm18: Immunity prote 29.2 59 0.0013 17.6 1.9 30 60-90 4-33 (52)
455 PF13709 DUF4159: Domain of un 29.1 2.3E+02 0.0051 20.8 5.8 38 206-243 53-90 (207)
456 PRK06696 uridine kinase; Valid 28.8 1.7E+02 0.0036 21.6 5.0 36 8-43 20-57 (223)
457 PF06289 FlbD: Flagellar prote 28.7 1.2E+02 0.0025 17.2 3.2 34 232-266 25-58 (60)
458 PRK14479 dihydroxyacetone kina 28.7 2.1E+02 0.0046 25.0 6.0 34 8-41 250-288 (568)
459 PF05577 Peptidase_S28: Serine 28.6 43 0.00092 27.8 2.0 40 207-249 377-416 (434)
460 PLN02735 carbamoyl-phosphate s 28.6 2.5E+02 0.0054 27.0 6.9 86 8-97 573-667 (1102)
461 KOG0854 Alkyl hydroperoxide re 28.5 1.9E+02 0.004 20.7 4.6 56 9-74 33-94 (224)
462 KOG2214 Predicted esterase of 28.5 32 0.0007 28.8 1.3 32 76-107 200-231 (543)
463 PLN02863 UDP-glucoronosyl/UDP- 28.5 1.9E+02 0.0041 24.6 5.7 45 1-45 1-46 (477)
464 cd03805 GT1_ALG2_like This fam 28.5 1E+02 0.0022 24.9 4.1 32 12-43 3-37 (392)
465 CHL00175 minD septum-site dete 28.4 1.6E+02 0.0035 22.6 5.0 37 9-45 15-53 (281)
466 PF03681 UPF0150: Uncharacteri 28.4 45 0.00097 17.4 1.4 33 34-72 11-43 (48)
467 PRK14494 putative molybdopteri 28.4 2.2E+02 0.0047 21.4 5.4 40 11-50 2-43 (229)
468 PRK07053 glutamine amidotransf 28.3 2.6E+02 0.0056 21.0 6.1 83 9-96 3-100 (234)
469 TIGR02883 spore_cwlD N-acetylm 28.3 90 0.002 22.4 3.4 15 39-54 2-16 (189)
470 PLN02924 thymidylate kinase 28.2 1.9E+02 0.0041 21.5 5.1 39 8-46 14-54 (220)
471 CHL00194 ycf39 Ycf39; Provisio 28.2 1.9E+02 0.0041 22.7 5.5 23 23-45 11-33 (317)
472 PRK00431 RNase III inhibitor; 28.2 2.2E+02 0.0047 20.1 5.7 62 26-89 102-163 (177)
473 KOG1465 Translation initiation 28.2 1.4E+02 0.003 23.4 4.3 32 11-43 164-195 (353)
474 TIGR00174 miaA tRNA isopenteny 28.1 1.3E+02 0.0029 23.4 4.4 31 56-86 66-97 (287)
475 TIGR03127 RuMP_HxlB 6-phospho 28.1 1.1E+02 0.0025 21.5 3.9 33 67-99 20-52 (179)
476 KOG1511 Mevalonate kinase MVK/ 28.1 1.5E+02 0.0032 23.9 4.6 44 8-52 337-380 (397)
477 PRK06029 3-octaprenyl-4-hydrox 28.1 2.3E+02 0.005 20.4 6.4 54 9-74 115-174 (185)
478 KOG2004 Mitochondrial ATP-depe 27.8 2.7E+02 0.0058 25.3 6.3 99 5-112 433-561 (906)
479 PF02502 LacAB_rpiB: Ribose/Ga 27.8 2E+02 0.0044 19.6 7.3 73 26-111 15-88 (140)
480 PF03698 UPF0180: Uncharacteri 27.8 68 0.0015 19.3 2.2 20 25-44 10-29 (80)
481 COG0426 FpaA Uncharacterized f 27.7 3.5E+02 0.0076 22.3 7.4 81 11-112 250-339 (388)
482 PRK06193 hypothetical protein; 27.7 92 0.002 22.9 3.3 29 59-87 136-165 (206)
483 PF11009 DUF2847: Protein of u 27.6 1.6E+02 0.0035 18.9 4.0 34 64-98 7-40 (105)
484 cd00762 NAD_bind_malic_enz NAD 27.6 1.9E+02 0.0041 22.1 5.0 81 13-96 28-125 (254)
485 cd07199 Pat17_PNPLA8_PNPLA9_li 27.6 52 0.0011 25.0 2.2 18 81-98 37-54 (258)
486 COG1485 Predicted ATPase [Gene 27.6 96 0.0021 24.9 3.5 12 13-24 68-79 (367)
487 COG1341 Predicted GTPase or GT 27.5 2.4E+02 0.0052 23.2 5.8 46 9-55 72-119 (398)
488 TIGR00632 vsr DNA mismatch end 27.4 1.6E+02 0.0034 19.4 3.9 14 29-42 100-113 (117)
489 PRK13230 nitrogenase reductase 27.4 1.4E+02 0.003 22.9 4.5 40 11-51 3-44 (279)
490 PF09314 DUF1972: Domain of un 27.4 2.4E+02 0.0052 20.3 8.5 87 10-96 4-112 (185)
491 PRK01906 tetraacyldisaccharide 27.0 1.9E+02 0.0042 23.2 5.2 43 9-52 55-101 (338)
492 PRK08105 flavodoxin; Provision 27.0 2.1E+02 0.0044 19.6 4.8 6 79-84 86-91 (149)
493 PRK05441 murQ N-acetylmuramic 26.8 1.2E+02 0.0027 23.7 4.1 34 67-100 52-85 (299)
494 PF03721 UDPG_MGDP_dh_N: UDP-g 26.8 1.2E+02 0.0027 21.6 3.9 28 14-44 4-31 (185)
495 COG1832 Predicted CoA-binding 26.8 1.5E+02 0.0032 20.2 3.8 31 14-44 20-51 (140)
496 PRK05665 amidotransferase; Pro 26.7 1E+02 0.0022 23.2 3.5 37 59-96 72-108 (240)
497 COG0337 AroB 3-dehydroquinate 26.7 3.5E+02 0.0076 22.0 7.7 66 11-84 35-100 (360)
498 cd06292 PBP1_LacI_like_10 Liga 26.7 2.8E+02 0.006 20.8 7.1 18 25-42 44-61 (273)
499 cd01406 SIR2-like Sir2-like: P 26.6 62 0.0013 24.2 2.4 29 67-95 169-197 (242)
500 KOG1359 Glycine C-acetyltransf 26.5 1.4E+02 0.0031 23.4 4.2 55 20-74 352-406 (417)
No 1
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=8.3e-41 Score=250.76 Aligned_cols=249 Identities=34% Similarity=0.541 Sum_probs=166.7
Q ss_pred ceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCC-CcEEEEEechh
Q 024065 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAE-EKVILVGHSLG 88 (273)
Q Consensus 10 ~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~lvG~S~G 88 (273)
-+|||+||++.+...|+.+++.|.+.||+|+++|+||||.|+.+....++++++++|+.++++.+ +. ++++++|||||
T Consensus 4 ~~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l-~~~~~~~lvGhSmG 82 (255)
T PLN02965 4 IHFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDL-PPDHKVILVGHSIG 82 (255)
T ss_pred eEEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhc-CCCCCEEEEecCcc
Confidence 35999999999999999999999777899999999999999866544578999999999999999 66 59999999999
Q ss_pred HHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCCcccccccchhhhhhhh
Q 024065 89 GVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIY 168 (273)
Q Consensus 89 g~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (273)
|.+++.++.++|++|+++|++++................... ....+. ....... ............+....+.
T Consensus 83 G~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~ 156 (255)
T PLN02965 83 GGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEG---TEKIWD-YTFGEGP--DKPPTGIMMKPEFVRHYYY 156 (255)
T ss_pred hHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhc---ccccee-eeeccCC--CCCcchhhcCHHHHHHHHh
Confidence 999999999999999999999986432221111111110000 000000 0000000 0000000111112212222
Q ss_pred cCCCchhHHHhhhhccCCcc-ccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCCCceEEEEecCCccc
Q 024065 169 QLCPPEDLELAKMLVRPGSM-FIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDHMA 247 (273)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 247 (273)
.................... ....... .......+++|+++++|++|.++|++..+.+.+.+|++++++++++||++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a~~~~i~~~GH~~ 234 (255)
T PLN02965 157 NQSPLEDYTLSSKLLRPAPVRAFQDLDK--LPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPPAQTYVLEDSDHSA 234 (255)
T ss_pred cCCCHHHHHHHHHhcCCCCCcchhhhhh--ccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCcceEEEecCCCCch
Confidence 22211111111111111100 0011110 01123346999999999999999999999999999999999999999999
Q ss_pred cccChHhHHHHHHHHHhccc
Q 024065 248 MLSDPQKLCDCLSQISLNRH 267 (273)
Q Consensus 248 ~~~~~~~~~~~i~~fl~~~~ 267 (273)
++|+|++|++.|.+|++..+
T Consensus 235 ~~e~p~~v~~~l~~~~~~~~ 254 (255)
T PLN02965 235 FFSVPTTLFQYLLQAVSSLQ 254 (255)
T ss_pred hhcCHHHHHHHHHHHHHHhc
Confidence 99999999999999998764
No 2
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=3.9e-39 Score=246.86 Aligned_cols=249 Identities=16% Similarity=0.164 Sum_probs=163.7
Q ss_pred CCCCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcC------CCcchhhchHHHHHHHHhCCCCCc
Q 024065 6 GMEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIE------DVHTFHAYSEPLMEVLASLPAEEK 79 (273)
Q Consensus 6 g~~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~------~~~~~~~~~~~l~~~l~~~~~~~~ 79 (273)
|+++++|||+||+++++..|+.+++.|+++ |+|+++|+||||.|+.+.. ..++++++++++.++++++ +.++
T Consensus 26 G~~~~~vlllHG~~~~~~~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l-~~~~ 103 (294)
T PLN02824 26 GTSGPALVLVHGFGGNADHWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV-VGDP 103 (294)
T ss_pred CCCCCeEEEECCCCCChhHHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHh-cCCC
Confidence 444689999999999999999999999987 8999999999999986532 3479999999999999999 8899
Q ss_pred EEEEEechhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcc-hhHh----hhhhhccCCCccchhhhhhhccC------
Q 024065 80 VILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPS-FVLE----QYSEKMGKEDDSWLDTQFSQCDA------ 148 (273)
Q Consensus 80 ~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~------ 148 (273)
++++||||||.+++.+|.++|++|+++|++++.......... .... .+...+ ....+..........
T Consensus 104 ~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 181 (294)
T PLN02824 104 AFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLL--RETAVGKAFFKSVATPETVKN 181 (294)
T ss_pred eEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHH--hchhHHHHHHHhhcCHHHHHH
Confidence 999999999999999999999999999999975422111100 0001 111111 000000000000000
Q ss_pred -C-CCCcccccccchhhhhhhhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHH
Q 024065 149 -S-NPSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQH 226 (273)
Q Consensus 149 -~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~ 226 (273)
. ..........++....................+.. .............+++|+|+|+|++|.++|.+..+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~ 254 (294)
T PLN02824 182 ILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFIS-------YSGGPLPEELLPAVKCPVLIAWGEKDPWEPVELGR 254 (294)
T ss_pred HHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhc-------cccccchHHHHhhcCCCeEEEEecCCCCCChHHHH
Confidence 0 00000000011111111000000000000000000 00000111224556999999999999999999999
Q ss_pred HHHHhCCCceEEEEecCCccccccChHhHHHHHHHHHhc
Q 024065 227 WMIQNYPVNEVMEIKGGDHMAMLSDPQKLCDCLSQISLN 265 (273)
Q Consensus 227 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 265 (273)
.+.+..+++++++++++||++++|+|+++++.|.+|+++
T Consensus 255 ~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 255 AYANFDAVEDFIVLPGVGHCPQDEAPELVNPLIESFVAR 293 (294)
T ss_pred HHHhcCCccceEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 998888889999999999999999999999999999975
No 3
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=7.2e-39 Score=246.13 Aligned_cols=249 Identities=15% Similarity=0.086 Sum_probs=161.9
Q ss_pred CCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcC-CCcchhhchHHHHHHHHhCCCCCcEEEEEec
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIE-DVHTFHAYSEPLMEVLASLPAEEKVILVGHS 86 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S 86 (273)
++|+|||+||++++...|..+++.|.++||+|+++|+||||.|+.+.. ..++++++++++.++++++ +.++++++|||
T Consensus 45 ~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l-~~~~v~lvGhS 123 (302)
T PRK00870 45 DGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQL-DLTDVTLVCQD 123 (302)
T ss_pred CCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHc-CCCCEEEEEEC
Confidence 478999999999999999999999987789999999999999986543 3478999999999999999 88999999999
Q ss_pred hhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCCcccccccchhhhhh
Q 024065 87 LGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIK 166 (273)
Q Consensus 87 ~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (273)
|||.+|+.+|.++|++|+++|++++..+............+.................... ...+..+....
T Consensus 124 ~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~- 195 (302)
T PRK00870 124 WGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRAFSQYSPVLPVGRLVNGGT-------VRDLSDAVRAA- 195 (302)
T ss_pred hHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhcccccCchhhHHHHhhccc-------cccCCHHHHHH-
Confidence 9999999999999999999999987533222111111111111000000000000000000 00011111111
Q ss_pred hhcCCCchhH-H---HhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCCCce---EEE
Q 024065 167 IYQLCPPEDL-E---LAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNE---VME 239 (273)
Q Consensus 167 ~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~---~~~ 239 (273)
+......... . ...........................+++|+++|+|++|.++|... +.+.+.+++.+ +.+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~ 274 (302)
T PRK00870 196 YDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPITGGGD-AILQKRIPGAAGQPHPT 274 (302)
T ss_pred hhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCcccCch-HHHHhhcccccccceee
Confidence 1000000000 0 00000000000000000000112235569999999999999999866 88999998876 889
Q ss_pred EecCCccccccChHhHHHHHHHHHhcc
Q 024065 240 IKGGDHMAMLSDPQKLCDCLSQISLNR 266 (273)
Q Consensus 240 ~~~~gH~~~~~~~~~~~~~i~~fl~~~ 266 (273)
++++||++++|+|+++++.|.+|+++.
T Consensus 275 i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 275 IKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred ecCCCccchhhChHHHHHHHHHHHhcC
Confidence 999999999999999999999999764
No 4
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=4.2e-38 Score=238.98 Aligned_cols=245 Identities=12% Similarity=0.086 Sum_probs=163.3
Q ss_pred CCCCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEe
Q 024065 6 GMEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGH 85 (273)
Q Consensus 6 g~~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~ 85 (273)
+.++++|||+||++++...|..+++.|.+. |+|+++|+||||.|+.+. ..++++++++++.++++++ +.++++|+||
T Consensus 22 ~~~~~plvllHG~~~~~~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~-~~~~~~~~~~~~~~~i~~l-~~~~~~LvG~ 98 (276)
T TIGR02240 22 KEGLTPLLIFNGIGANLELVFPFIEALDPD-LEVIAFDVPGVGGSSTPR-HPYRFPGLAKLAARMLDYL-DYGQVNAIGV 98 (276)
T ss_pred CCCCCcEEEEeCCCcchHHHHHHHHHhccC-ceEEEECCCCCCCCCCCC-CcCcHHHHHHHHHHHHHHh-CcCceEEEEE
Confidence 344589999999999999999999999875 999999999999998654 3478999999999999999 8899999999
Q ss_pred chhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcc-hhHhhhhhhccCCCccchhhhhhh-ccCCCCCcccccccchhh
Q 024065 86 SLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPS-FVLEQYSEKMGKEDDSWLDTQFSQ-CDASNPSHISMLFGREFL 163 (273)
Q Consensus 86 S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 163 (273)
||||.+++.+|.++|++|+++|+++++......... ...... . ....+....... ... ..........+...
T Consensus 99 S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 172 (276)
T TIGR02240 99 SWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMM---A--SPRRYIQPSHGIHIAP-DIYGGAFRRDPELA 172 (276)
T ss_pred CHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHh---c--Cchhhhccccccchhh-hhccceeeccchhh
Confidence 999999999999999999999999986432111110 000000 0 000000000000 000 00000000000100
Q ss_pred hhhhhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCCCceEEEEecC
Q 024065 164 TIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGG 243 (273)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (273)
.................... ... ..........+++|+|+|+|++|+++|++..+.+.+.+|++++++++ +
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~~~~~~i~-~ 243 (276)
T TIGR02240 173 MAHASKVRSGGKLGYYWQLF-------AGL-GWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIPNAELHIID-D 243 (276)
T ss_pred hhhhhhcccCCCchHHHHHH-------HHc-CCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCCCCEEEEEc-C
Confidence 00000000000000000000 000 01111224566999999999999999999999999999999999998 5
Q ss_pred CccccccChHhHHHHHHHHHhcccc
Q 024065 244 DHMAMLSDPQKLCDCLSQISLNRHD 268 (273)
Q Consensus 244 gH~~~~~~~~~~~~~i~~fl~~~~~ 268 (273)
||++++|+|+++++.|.+|+++...
T Consensus 244 gH~~~~e~p~~~~~~i~~fl~~~~~ 268 (276)
T TIGR02240 244 GHLFLITRAEAVAPIIMKFLAEERQ 268 (276)
T ss_pred CCchhhccHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999997654
No 5
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1.4e-37 Score=238.42 Aligned_cols=257 Identities=16% Similarity=0.147 Sum_probs=162.0
Q ss_pred cCCCCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEE
Q 024065 5 VGMEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVG 84 (273)
Q Consensus 5 ~g~~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG 84 (273)
.|+ +++|||+||++++...|+.+++.|.++ ++|+++|+||||.|+.+.. .++++++++|+.++++++ +.++++++|
T Consensus 24 ~G~-g~~vvllHG~~~~~~~w~~~~~~L~~~-~~via~D~~G~G~S~~~~~-~~~~~~~a~dl~~ll~~l-~~~~~~lvG 99 (295)
T PRK03592 24 TGE-GDPIVFLHGNPTSSYLWRNIIPHLAGL-GRCLAPDLIGMGASDKPDI-DYTFADHARYLDAWFDAL-GLDDVVLVG 99 (295)
T ss_pred eCC-CCEEEEECCCCCCHHHHHHHHHHHhhC-CEEEEEcCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHh-CCCCeEEEE
Confidence 344 789999999999999999999999988 6999999999999987654 479999999999999999 889999999
Q ss_pred echhHHHHHHHHHHCCCccceeEEeeccCCCCCCC-cchhHhhhhhhccCCC--ccch-h--hhhhhccCCCCCcccccc
Q 024065 85 HSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHR-PSFVLEQYSEKMGKED--DSWL-D--TQFSQCDASNPSHISMLF 158 (273)
Q Consensus 85 ~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~-~--~~~~~~~~~~~~~~~~~~ 158 (273)
|||||.+|+.++.++|++|+++|++++........ ...........+.... .... . ....... . ......+
T Consensus 100 hS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~ 176 (295)
T PRK03592 100 HDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMVLEENVFIERVL--P-GSILRPL 176 (295)
T ss_pred ECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccccccchhhHHhhcc--c-CcccccC
Confidence 99999999999999999999999999743221100 0101111111110000 0000 0 0000000 0 0000011
Q ss_pred cchhhhhhhhcCCCchhHHHhhhhccCCc--cccccccc--cCcCCccCcccceEEEEeecCCCCCCHH-HHHHHHHhCC
Q 024065 159 GREFLTIKIYQLCPPEDLELAKMLVRPGS--MFIDNLSK--ESKFSDEGYGSVKRVYLVCEEDIGLPKQ-FQHWMIQNYP 233 (273)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~Pvl~i~g~~D~~~~~~-~~~~~~~~~~ 233 (273)
.++....................+.+... ........ .........+++|+|+|+|++|.++++. ..+.+.+..+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~ 256 (295)
T PRK03592 177 SDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAEPGAILTTGAIRDWCRSWPN 256 (295)
T ss_pred CHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEeccCCcccCcHHHHHHHHHhhh
Confidence 11111111110001111000000000000 00000000 0001124556999999999999999544 4444456678
Q ss_pred CceEEEEecCCccccccChHhHHHHHHHHHhcccc
Q 024065 234 VNEVMEIKGGDHMAMLSDPQKLCDCLSQISLNRHD 268 (273)
Q Consensus 234 ~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 268 (273)
++++++++++||++++|+|+++++.|.+|+++...
T Consensus 257 ~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 257 QLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLRL 291 (295)
T ss_pred hcceeeccCcchhhhhcCHHHHHHHHHHHHHHhcc
Confidence 89999999999999999999999999999987654
No 6
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=3.5e-37 Score=225.15 Aligned_cols=252 Identities=18% Similarity=0.208 Sum_probs=168.3
Q ss_pred CCCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcC-CCcchhhchHHHHHHHHhCCCCCcEEEEEe
Q 024065 7 MEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIE-DVHTFHAYSEPLMEVLASLPAEEKVILVGH 85 (273)
Q Consensus 7 ~~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~ 85 (273)
.++|.|+++||++.++..|+.+...|+.+||+|+++|+||+|.|+.+.. ..|++..++.|+..+++++ +.++++++||
T Consensus 42 ~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~L-g~~k~~lvgH 120 (322)
T KOG4178|consen 42 GDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDHL-GLKKAFLVGH 120 (322)
T ss_pred CCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHh-ccceeEEEec
Confidence 4699999999999999999999999999999999999999999999887 7799999999999999999 8999999999
Q ss_pred chhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCCcccccccchhhhh
Q 024065 86 SLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTI 165 (273)
Q Consensus 86 S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (273)
+||+++|..+|..+|++|+++|+++.+...+...+...... .. ...+....++... ...........+.+..
T Consensus 121 DwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~---~f---~~~~y~~~fQ~~~--~~E~~~s~~~~~~~~~ 192 (322)
T KOG4178|consen 121 DWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKA---IF---GKSYYICLFQEPG--KPETELSKDDTEMLVK 192 (322)
T ss_pred cchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhcc---cc---CccceeEeccccC--cchhhhccchhHHhHH
Confidence 99999999999999999999999997655221111110000 00 0111000000000 0000000000000000
Q ss_pred hhh-c-----------------CCCchhHHHhhhhccCCc-----cccccccccC--cCCccCcccceEEEEeecCCCCC
Q 024065 166 KIY-Q-----------------LCPPEDLELAKMLVRPGS-----MFIDNLSKES--KFSDEGYGSVKRVYLVCEEDIGL 220 (273)
Q Consensus 166 ~~~-~-----------------~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~~~~~Pvl~i~g~~D~~~ 220 (273)
.+. . ....++.+.......... .+...+.... .......+++|+++++|+.|.+.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~~~~~i~iPv~fi~G~~D~v~ 272 (322)
T KOG4178|consen 193 TFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPWALAKITIPVLFIWGDLDPVL 272 (322)
T ss_pred hhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchhccccccccccceEEEEecCcccc
Confidence 000 0 000111111111111100 0111222221 12235566999999999999999
Q ss_pred CHH-HHHHHHHhCCCc-eEEEEecCCccccccChHhHHHHHHHHHhccc
Q 024065 221 PKQ-FQHWMIQNYPVN-EVMEIKGGDHMAMLSDPQKLCDCLSQISLNRH 267 (273)
Q Consensus 221 ~~~-~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 267 (273)
+.. ....+.+..|+. +.++++|+||+++.|+|+++++.|.+|+++..
T Consensus 273 ~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~~ 321 (322)
T KOG4178|consen 273 PYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSFS 321 (322)
T ss_pred cchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHhhc
Confidence 766 456666777776 78899999999999999999999999998754
No 7
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=3.6e-37 Score=240.93 Aligned_cols=247 Identities=15% Similarity=0.098 Sum_probs=157.9
Q ss_pred CceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEechh
Q 024065 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLG 88 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~G 88 (273)
+|+|||+||++++...|..+++.|.+ +|+|+++|+||||.|+.+....++++++++++.++++++ +.++++|+|||||
T Consensus 88 gp~lvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l-~~~~~~lvGhS~G 165 (360)
T PLN02679 88 GPPVLLVHGFGASIPHWRRNIGVLAK-NYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEV-VQKPTVLIGNSVG 165 (360)
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHh-cCCCeEEEEECHH
Confidence 58999999999999999999999987 599999999999999876544579999999999999999 8899999999999
Q ss_pred HHHHHHHHH-HCCCccceeEEeeccCCCCCCCc-chhHhhh-------hhhccCCCccchhhhhhhccCCCCCc------
Q 024065 89 GVTLALAAD-KFPHKISVAVFVTAFMPDTTHRP-SFVLEQY-------SEKMGKEDDSWLDTQFSQCDASNPSH------ 153 (273)
Q Consensus 89 g~~a~~~a~-~~p~~v~~lil~~~~~~~~~~~~-~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~------ 153 (273)
|.+++.++. .+|++|+++|++++......... ....... ..... .........+.... ....
T Consensus 166 g~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~ 242 (360)
T PLN02679 166 SLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLL-KQRGIASALFNRVK--QRDNLKNILL 242 (360)
T ss_pred HHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHh-hchhhHHHHHHHhc--CHHHHHHHHH
Confidence 999999887 47999999999997532211110 0000000 00000 00000000000000 0000
Q ss_pred ----ccccccchhhhhhhhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHH-----
Q 024065 154 ----ISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQF----- 224 (273)
Q Consensus 154 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~----- 224 (273)
......++....................... .............+++|+|+|+|++|.++|++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~ 315 (360)
T PLN02679 243 SVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVT-------GPPGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKY 315 (360)
T ss_pred HhccCcccCCHHHHHHHHhhccCCChHHHHHHHHh-------cCCCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHH
Confidence 0000000110000000000000000000000 000001112244569999999999999998763
Q ss_pred HHHHHHhCCCceEEEEecCCccccccChHhHHHHHHHHHhccc
Q 024065 225 QHWMIQNYPVNEVMEIKGGDHMAMLSDPQKLCDCLSQISLNRH 267 (273)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 267 (273)
.+.+.+.+|++++++++++||++++|+|+++++.|.+||++..
T Consensus 316 ~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~~~ 358 (360)
T PLN02679 316 FSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQLP 358 (360)
T ss_pred HHhhhccCCceEEEEcCCCCCCccccCHHHHHHHHHHHHHhcC
Confidence 3456777899999999999999999999999999999998754
No 8
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=5.2e-37 Score=233.28 Aligned_cols=252 Identities=10% Similarity=0.093 Sum_probs=157.4
Q ss_pred cCCCCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEE
Q 024065 5 VGMEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVG 84 (273)
Q Consensus 5 ~g~~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG 84 (273)
.|. +++|||+||++.+...|+.+.+.|.+. |+|+++|+||||.|+.+....++.+++++++.++++++ +.++++++|
T Consensus 31 ~G~-~~~iv~lHG~~~~~~~~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~lvG 107 (286)
T PRK03204 31 EGT-GPPILLCHGNPTWSFLYRDIIVALRDR-FRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDHL-GLDRYLSMG 107 (286)
T ss_pred CCC-CCEEEEECCCCccHHHHHHHHHHHhCC-cEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHHHh-CCCCEEEEE
Confidence 344 689999999999999999999999865 99999999999999876554578999999999999999 889999999
Q ss_pred echhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchh-hhh-hhccCCCCCcccccccchh
Q 024065 85 HSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLD-TQF-SQCDASNPSHISMLFGREF 162 (273)
Q Consensus 85 ~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~ 162 (273)
|||||.+++.++..+|++|+++|++++.................... .....+.. ... .... .... ........
T Consensus 108 ~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~ 183 (286)
T PRK03204 108 QDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSP-PVQYAILRRNFFVERLI--PAGT-EHRPSSAV 183 (286)
T ss_pred ECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhccc-cchhhhhhhhHHHHHhc--cccc-cCCCCHHH
Confidence 99999999999999999999999988653211100000000000000 00000000 000 0000 0000 00011111
Q ss_pred hhhhhhcCCC-chhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHH-HHHHHHHhCCCceEEEE
Q 024065 163 LTIKIYQLCP-PEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQ-FQHWMIQNYPVNEVMEI 240 (273)
Q Consensus 163 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~ 240 (273)
... +..... ....................+...........+++|||+|+|++|.++++. ..+.+.+.+|+++++++
T Consensus 184 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~~~~~i 262 (286)
T PRK03204 184 MAH-YRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATFPDHVLVEL 262 (286)
T ss_pred HHH-hcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhcCCCeEEEc
Confidence 111 111000 000000000000000000000000000000112899999999999988654 57889999999999999
Q ss_pred ecCCccccccChHhHHHHHHHHHh
Q 024065 241 KGGDHMAMLSDPQKLCDCLSQISL 264 (273)
Q Consensus 241 ~~~gH~~~~~~~~~~~~~i~~fl~ 264 (273)
+++||++++|+|+++++.|.+||.
T Consensus 263 ~~aGH~~~~e~Pe~~~~~i~~~~~ 286 (286)
T PRK03204 263 PNAKHFIQEDAPDRIAAAIIERFG 286 (286)
T ss_pred CCCcccccccCHHHHHHHHHHhcC
Confidence 999999999999999999999973
No 9
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=100.00 E-value=2.7e-36 Score=227.22 Aligned_cols=246 Identities=34% Similarity=0.619 Sum_probs=169.6
Q ss_pred CCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEech
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSL 87 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~ 87 (273)
++|+|||+||++.+...|..+...|.++||+|+++|+||||.|.......++++++++++.++++.+...++++||||||
T Consensus 17 ~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~~~~~v~lvGhS~ 96 (273)
T PLN02211 17 QPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLPENEKVILVGHSA 96 (273)
T ss_pred CCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcCCCCCEEEEEECc
Confidence 47899999999999999999999998889999999999999986554444799999999999999983358999999999
Q ss_pred hHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchh--hh----hhhccCCCCCcccccccch
Q 024065 88 GGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLD--TQ----FSQCDASNPSHISMLFGRE 161 (273)
Q Consensus 88 Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~~ 161 (273)
||.++..++.++|++|+++|++++..+..+..... .+.... ..+.. .. ..... ...........+
T Consensus 97 GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~---~~~~~~----~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 167 (273)
T PLN02211 97 GGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDE---DMKDGV----PDLSEFGDVYELGFGLGP--DQPPTSAIIKKE 167 (273)
T ss_pred hHHHHHHHHHhChhheeEEEEeccccCCCCCCHHH---HHhccc----cchhhhccceeeeeccCC--CCCCceeeeCHH
Confidence 99999999999999999999998764432222111 111000 00000 00 00000 001111112233
Q ss_pred hhhhhhhcCCCchhHHHhhhhccCCccccccccccCcCCcc-CcccceEEEEeecCCCCCCHHHHHHHHHhCCCceEEEE
Q 024065 162 FLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDE-GYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEI 240 (273)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 240 (273)
+....++...+...........+..... .+......... ...++|+++|.|++|..+|++.++.+.+.+++.+++.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~~~~~~l 245 (273)
T PLN02211 168 FRRKILYQMSPQEDSTLAAMLLRPGPIL--ALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWPPSQVYEL 245 (273)
T ss_pred HHHHHHhcCCCHHHHHHHHHhcCCcCcc--ccccccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhCCccEEEEE
Confidence 3344445544444433333333322111 11111111111 22378999999999999999999999999999999999
Q ss_pred ecCCccccccChHhHHHHHHHHHhc
Q 024065 241 KGGDHMAMLSDPQKLCDCLSQISLN 265 (273)
Q Consensus 241 ~~~gH~~~~~~~~~~~~~i~~fl~~ 265 (273)
+ +||.+++++|+++.+.|.++...
T Consensus 246 ~-~gH~p~ls~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 246 E-SDHSPFFSTPFLLFGLLIKAAAS 269 (273)
T ss_pred C-CCCCccccCHHHHHHHHHHHHHH
Confidence 7 99999999999999999988654
No 10
>PRK10349 carboxylesterase BioH; Provisional
Probab=100.00 E-value=1.3e-36 Score=228.52 Aligned_cols=240 Identities=19% Similarity=0.202 Sum_probs=152.5
Q ss_pred cCCCCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEE
Q 024065 5 VGMEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVG 84 (273)
Q Consensus 5 ~g~~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG 84 (273)
.|++.|+|||+||+++++..|..+.+.|.++ |+|+++|+||||.|+.+. .++++++++++. ++ ..++++++|
T Consensus 9 ~G~g~~~ivllHG~~~~~~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~--~~~~~~~~~~l~----~~-~~~~~~lvG 80 (256)
T PRK10349 9 KGQGNVHLVLLHGWGLNAEVWRCIDEELSSH-FTLHLVDLPGFGRSRGFG--ALSLADMAEAVL----QQ-APDKAIWLG 80 (256)
T ss_pred cCCCCCeEEEECCCCCChhHHHHHHHHHhcC-CEEEEecCCCCCCCCCCC--CCCHHHHHHHHH----hc-CCCCeEEEE
Confidence 4554457999999999999999999999876 999999999999997543 357777766654 34 558999999
Q ss_pred echhHHHHHHHHHHCCCccceeEEeeccCCCCCCCc-ch----hHhhhhhhccCCCccchhhhhhhccCCCCCccccccc
Q 024065 85 HSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRP-SF----VLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFG 159 (273)
Q Consensus 85 ~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (273)
|||||.+|+.+|.++|++|+++|++++......... .. ....+...............+.... ... ....
T Consensus 81 hS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~ 155 (256)
T PRK10349 81 WSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQT--MGT---ETAR 155 (256)
T ss_pred ECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHH--ccC---chHH
Confidence 999999999999999999999999987532111100 00 0111111000000000000000000 000 0000
Q ss_pred chh--hhhhhhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCCCceE
Q 024065 160 REF--LTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEV 237 (273)
Q Consensus 160 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~ 237 (273)
... .................. ....+...+.......+++|+|+++|++|.++|.+..+.+.+.++++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~~~~ 227 (256)
T PRK10349 156 QDARALKKTVLALPMPEVDVLNG--------GLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSES 227 (256)
T ss_pred HHHHHHHHHhhccCCCcHHHHHH--------HHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCCCCeE
Confidence 000 000000000000000000 0000111112223455699999999999999999999999999999999
Q ss_pred EEEecCCccccccChHhHHHHHHHHHhc
Q 024065 238 MEIKGGDHMAMLSDPQKLCDCLSQISLN 265 (273)
Q Consensus 238 ~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 265 (273)
++++++||++++|+|++|++.|.+|-++
T Consensus 228 ~~i~~~gH~~~~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 228 YIFAKAAHAPFISHPAEFCHLLVALKQR 255 (256)
T ss_pred EEeCCCCCCccccCHHHHHHHHHHHhcc
Confidence 9999999999999999999999998654
No 11
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=100.00 E-value=2.6e-36 Score=230.31 Aligned_cols=249 Identities=18% Similarity=0.143 Sum_probs=156.1
Q ss_pred cCCCCceEEEEccCCCchhhHHH---HHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEE
Q 024065 5 VGMEEKHFVLVHGVNHGAWCWYK---LKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVI 81 (273)
Q Consensus 5 ~g~~~~~vv~lhG~~~~~~~~~~---~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 81 (273)
.|+ +|+|||+||++++...|.. .+..+.+.||+|+++|+||||.|+.+.........+++++.++++.+ +.++++
T Consensus 27 ~g~-~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l-~~~~~~ 104 (282)
T TIGR03343 27 AGN-GEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDAL-DIEKAH 104 (282)
T ss_pred cCC-CCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHc-CCCCee
Confidence 344 7899999999988888764 34566667899999999999999865422112225789999999999 899999
Q ss_pred EEEechhHHHHHHHHHHCCCccceeEEeeccCCCCCC--Ccc-hhHhhhhhhccCCCccchhhhhhhccCCCCCcccccc
Q 024065 82 LVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTH--RPS-FVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLF 158 (273)
Q Consensus 82 lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (273)
++||||||.+++.++.++|++|+++|++++....... ... .....+.................... .. ....
T Consensus 105 lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~ 179 (282)
T TIGR03343 105 LVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFL--FD---QSLI 179 (282)
T ss_pred EEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCc--cC---cccC
Confidence 9999999999999999999999999999975321100 000 01111111100000000000000000 00 0000
Q ss_pred cchhhhhhhhcC-CCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCCCceE
Q 024065 159 GREFLTIKIYQL-CPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEV 237 (273)
Q Consensus 159 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~ 237 (273)
............ ...... ..+...... ..+...........+++|+|+++|++|.++|++..+.+.+.+|++++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~~~~~ 254 (282)
T TIGR03343 180 TEELLQGRWENIQRQPEHL---KNFLISSQK--APLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMPDAQL 254 (282)
T ss_pred cHHHHHhHHHHhhcCHHHH---HHHHHhccc--cccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCCCCEE
Confidence 011000000000 000000 000000000 00001111122455699999999999999999999999999999999
Q ss_pred EEEecCCccccccChHhHHHHHHHHHhc
Q 024065 238 MEIKGGDHMAMLSDPQKLCDCLSQISLN 265 (273)
Q Consensus 238 ~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 265 (273)
++++++||+++.|+|+++++.|.+|++.
T Consensus 255 ~~i~~agH~~~~e~p~~~~~~i~~fl~~ 282 (282)
T TIGR03343 255 HVFSRCGHWAQWEHADAFNRLVIDFLRN 282 (282)
T ss_pred EEeCCCCcCCcccCHHHHHHHHHHHhhC
Confidence 9999999999999999999999999963
No 12
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=100.00 E-value=9.9e-36 Score=226.83 Aligned_cols=246 Identities=16% Similarity=0.164 Sum_probs=160.2
Q ss_pred CCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEech
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSL 87 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~ 87 (273)
++|+|||+||++++...|+.+.+.|++. |+|+++|+||||.|+.+....++++++++|+.++++++ +.++++++||||
T Consensus 27 ~~~~vv~~hG~~~~~~~~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~~-~~~~~~lvG~S~ 104 (278)
T TIGR03056 27 AGPLLLLLHGTGASTHSWRDLMPPLARS-FRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAAE-GLSPDGVIGHSA 104 (278)
T ss_pred CCCeEEEEcCCCCCHHHHHHHHHHHhhC-cEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHHc-CCCCceEEEECc
Confidence 4789999999999999999999999874 99999999999999876654579999999999999999 888999999999
Q ss_pred hHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCCcccccccchhhhhhh
Q 024065 88 GGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKI 167 (273)
Q Consensus 88 Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (273)
||.+++.++.++|++++++|++++...............+.... ....+.......... .... ........
T Consensus 105 Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~- 175 (278)
T TIGR03056 105 GAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVL--ACNPFTPPMMSRGAA-DQQR-----VERLIRDT- 175 (278)
T ss_pred cHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhh--hhcccchHHHHhhcc-cCcc-----hhHHhhcc-
Confidence 99999999999999999999998753321111000000000000 000000000000000 0000 00000000
Q ss_pred hcCCCchhHHHhhhhccCCcc------ccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCCCceEEEEe
Q 024065 168 YQLCPPEDLELAKMLVRPGSM------FIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIK 241 (273)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 241 (273)
..................... ................+++|+++|+|++|.++|++..+.+.+.+++++++.++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~~~~~~~~~~ 255 (278)
T TIGR03056 176 GSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDESKRAATRVPTATLHVVP 255 (278)
T ss_pred ccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCHHHHHHHHHhccCCeEEEEC
Confidence 000000000000000000000 00000000011124456899999999999999999999999999999999999
Q ss_pred cCCccccccChHhHHHHHHHHHh
Q 024065 242 GGDHMAMLSDPQKLCDCLSQISL 264 (273)
Q Consensus 242 ~~gH~~~~~~~~~~~~~i~~fl~ 264 (273)
++||++++|+|+++++.|.+|++
T Consensus 256 ~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 256 GGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred CCCCcccccCHHHHHHHHHHHhC
Confidence 99999999999999999999984
No 13
>PRK10673 acyl-CoA esterase; Provisional
Probab=100.00 E-value=1.3e-35 Score=223.21 Aligned_cols=239 Identities=15% Similarity=0.182 Sum_probs=159.6
Q ss_pred CCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEech
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSL 87 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~ 87 (273)
++|+|||+||++++...|..+...|.+. |+|+++|+||||.|..+.. ++++++++|+.++++++ +.++++++||||
T Consensus 15 ~~~~iv~lhG~~~~~~~~~~~~~~l~~~-~~vi~~D~~G~G~s~~~~~--~~~~~~~~d~~~~l~~l-~~~~~~lvGhS~ 90 (255)
T PRK10673 15 NNSPIVLVHGLFGSLDNLGVLARDLVND-HDIIQVDMRNHGLSPRDPV--MNYPAMAQDLLDTLDAL-QIEKATFIGHSM 90 (255)
T ss_pred CCCCEEEECCCCCchhHHHHHHHHHhhC-CeEEEECCCCCCCCCCCCC--CCHHHHHHHHHHHHHHc-CCCceEEEEECH
Confidence 5789999999999999999999999875 9999999999999986543 69999999999999999 888999999999
Q ss_pred hHHHHHHHHHHCCCccceeEEeeccCCCCCCCcc-hhHhhhhhhccCCCccchhhhhhhccCCCCCcccccccchhhhhh
Q 024065 88 GGVTLALAADKFPHKISVAVFVTAFMPDTTHRPS-FVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIK 166 (273)
Q Consensus 88 Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (273)
||.+++.+|.++|++|+++|++++.......... .....+.............. .... ...+........
T Consensus 91 Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------~~~~~~~~~~~~ 161 (255)
T PRK10673 91 GGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQA-AAIM--------RQHLNEEGVIQF 161 (255)
T ss_pred HHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHH-HHHH--------HHhcCCHHHHHH
Confidence 9999999999999999999999864221111000 00000000000000000000 0000 000000000000
Q ss_pred hhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCCCceEEEEecCCcc
Q 024065 167 IYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDHM 246 (273)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 246 (273)
........... .........+...........+++|+|+|+|++|..++.+..+.+.+.++++++++++++||+
T Consensus 162 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 235 (255)
T PRK10673 162 LLKSFVDGEWR------FNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQARAHVIAGAGHW 235 (255)
T ss_pred HHhcCCcceeE------eeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCe
Confidence 00000000000 000000001111111122344589999999999999999999999999999999999999999
Q ss_pred ccccChHhHHHHHHHHHhc
Q 024065 247 AMLSDPQKLCDCLSQISLN 265 (273)
Q Consensus 247 ~~~~~~~~~~~~i~~fl~~ 265 (273)
+++++|+++++.|.+||++
T Consensus 236 ~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 236 VHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred eeccCHHHHHHHHHHHHhc
Confidence 9999999999999999975
No 14
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=100.00 E-value=2.9e-35 Score=229.03 Aligned_cols=249 Identities=14% Similarity=0.116 Sum_probs=159.9
Q ss_pred CCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcC---CCcchhhchHHHHHHHHhCCCCCcEEEEE
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIE---DVHTFHAYSEPLMEVLASLPAEEKVILVG 84 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~---~~~~~~~~~~~l~~~l~~~~~~~~~~lvG 84 (273)
++|+|||+||++++...|+.+++.|.+ +|+|+++|+||||.|+.+.. ..++++++++++.++++++ +.++++|+|
T Consensus 126 ~~~~ivllHG~~~~~~~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l-~~~~~~LvG 203 (383)
T PLN03084 126 NNPPVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDEL-KSDKVSLVV 203 (383)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHh-CCCCceEEE
Confidence 478999999999999999999999986 59999999999999987653 2479999999999999999 889999999
Q ss_pred echhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhh-hhhhccCCCCCcccccccchhh
Q 024065 85 HSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDT-QFSQCDASNPSHISMLFGREFL 163 (273)
Q Consensus 85 ~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 163 (273)
||+||.+++.++.++|++|+++|++++...............+.... ...+... ...................+..
T Consensus 204 ~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 280 (383)
T PLN03084 204 QGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFL---LGEIFSQDPLRASDKALTSCGPYAMKEDDA 280 (383)
T ss_pred ECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHH---hhhhhhcchHHHHhhhhcccCccCCCHHHH
Confidence 99999999999999999999999999864322111111111110000 0000000 0000000000000000001110
Q ss_pred hhhhhcCCCch----hHH-HhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCCCceEE
Q 024065 164 TIKIYQLCPPE----DLE-LAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVM 238 (273)
Q Consensus 164 ~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 238 (273)
........... ... ....+......+...+... .....+++|+|+++|++|.+++.+..+.+.+. ++.+++
T Consensus 281 ~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~---l~~~~i~vPvLiI~G~~D~~v~~~~~~~~a~~-~~a~l~ 356 (383)
T PLN03084 281 MVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSI---LTDKNWKTPITVCWGLRDRWLNYDGVEDFCKS-SQHKLI 356 (383)
T ss_pred HHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhh---hccccCCCCEEEEeeCCCCCcCHHHHHHHHHh-cCCeEE
Confidence 00000000000 000 0000000000000011100 01124589999999999999999988888887 588999
Q ss_pred EEecCCccccccChHhHHHHHHHHHhc
Q 024065 239 EIKGGDHMAMLSDPQKLCDCLSQISLN 265 (273)
Q Consensus 239 ~~~~~gH~~~~~~~~~~~~~i~~fl~~ 265 (273)
+++++||++++|+|+++++.|.+|+.+
T Consensus 357 vIp~aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 357 ELPMAGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred EECCCCCCcchhCHHHHHHHHHHHhhC
Confidence 999999999999999999999999863
No 15
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=100.00 E-value=5.8e-35 Score=231.46 Aligned_cols=252 Identities=14% Similarity=0.148 Sum_probs=157.4
Q ss_pred CceEEEEccCCCchhhHHH-HHHHHh---hCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHH-HHHHhCCCCCcEEEE
Q 024065 9 EKHFVLVHGVNHGAWCWYK-LKARLV---AGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLM-EVLASLPAEEKVILV 83 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~~~-~~~~l~---~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~-~~l~~~~~~~~~~lv 83 (273)
+|+|||+||++++...|.. +.+.|. +++|+|+++|+||||.|+.+....++++++++++. .+++.+ +.++++++
T Consensus 201 k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a~~l~~~ll~~l-g~~k~~LV 279 (481)
T PLN03087 201 KEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREHLEMIERSVLERY-KVKSFHIV 279 (481)
T ss_pred CCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHHHHHHHHHHHHHc-CCCCEEEE
Confidence 5899999999999999985 446665 35799999999999999877555589999999995 889999 88999999
Q ss_pred EechhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccch-----hhhhhhcc-CCCCCc-ccc
Q 024065 84 GHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWL-----DTQFSQCD-ASNPSH-ISM 156 (273)
Q Consensus 84 G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~~~-~~~ 156 (273)
||||||.+++.+|.++|++|+++|+++++....... ............ ....|. ......+. . .... ...
T Consensus 280 GhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~w~~~~-~~~~~~~~ 356 (481)
T PLN03087 280 AHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKG-VQATQYVMRKVA-PRRVWPPIAFGASVACWYEHI-SRTICLVI 356 (481)
T ss_pred EECHHHHHHHHHHHhChHhccEEEEECCCccccccc-hhHHHHHHHHhc-ccccCCccccchhHHHHHHHH-Hhhhhccc
Confidence 999999999999999999999999999753221111 000111111000 000000 00000000 0 0000 000
Q ss_pred cccchhhh---hhhhcCCCchhHHHhhhhccC--Ccc--cccc-ccc-----cCcCC-ccCcccceEEEEeecCCCCCCH
Q 024065 157 LFGREFLT---IKIYQLCPPEDLELAKMLVRP--GSM--FIDN-LSK-----ESKFS-DEGYGSVKRVYLVCEEDIGLPK 222 (273)
Q Consensus 157 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~-~~~-----~~~~~-~~~~~~~Pvl~i~g~~D~~~~~ 222 (273)
........ ......... . .....+... ... .... +.. ..... ....+++|+|+++|++|.++|+
T Consensus 357 ~~~~~~~~~~~~l~~~~~~~-~-~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l~~~I~vPtLII~Ge~D~ivP~ 434 (481)
T PLN03087 357 CKNHRLWEFLTRLLTRNRMR-T-FLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDHVRDQLKCDVAIFHGGDDELIPV 434 (481)
T ss_pred ccchHHHHHHHHHhhhhhhh-H-HHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHHHHHhCCCCEEEEEECCCCCCCH
Confidence 00000000 000000000 0 000000000 000 0000 000 00000 1124589999999999999999
Q ss_pred HHHHHHHHhCCCceEEEEecCCccccc-cChHhHHHHHHHHHhcc
Q 024065 223 QFQHWMIQNYPVNEVMEIKGGDHMAML-SDPQKLCDCLSQISLNR 266 (273)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~~ 266 (273)
+..+.+.+.+|++++++++++||++++ ++|+++++.|.+|.+..
T Consensus 435 ~~~~~la~~iP~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~~ 479 (481)
T PLN03087 435 ECSYAVKAKVPRARVKVIDDKDHITIVVGRQKEFARELEEIWRRS 479 (481)
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCcchhhcCHHHHHHHHHHHhhcc
Confidence 999999999999999999999999986 99999999999998653
No 16
>PLN02578 hydrolase
Probab=100.00 E-value=5.8e-36 Score=233.97 Aligned_cols=251 Identities=18% Similarity=0.173 Sum_probs=159.7
Q ss_pred cCCCCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEE
Q 024065 5 VGMEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVG 84 (273)
Q Consensus 5 ~g~~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG 84 (273)
.|+ +++|||+||++++...|..+++.|.++ |+|+++|+||||.|+.+.. .++.+.+++++.++++.+ ..++++++|
T Consensus 83 ~g~-g~~vvliHG~~~~~~~w~~~~~~l~~~-~~v~~~D~~G~G~S~~~~~-~~~~~~~a~~l~~~i~~~-~~~~~~lvG 158 (354)
T PLN02578 83 QGE-GLPIVLIHGFGASAFHWRYNIPELAKK-YKVYALDLLGFGWSDKALI-EYDAMVWRDQVADFVKEV-VKEPAVLVG 158 (354)
T ss_pred cCC-CCeEEEECCCCCCHHHHHHHHHHHhcC-CEEEEECCCCCCCCCCccc-ccCHHHHHHHHHHHHHHh-ccCCeEEEE
Confidence 354 789999999999999999999999875 9999999999999987754 478999999999999999 789999999
Q ss_pred echhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchh-----Hhhhhhh-ccCCCccchhhhhhh---ccCCCCCcc-
Q 024065 85 HSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFV-----LEQYSEK-MGKEDDSWLDTQFSQ---CDASNPSHI- 154 (273)
Q Consensus 85 ~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~- 154 (273)
||+||.+++.+|.++|++|+++|++++............ ....... .......+....... ... ..+..
T Consensus 159 ~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 237 (354)
T PLN02578 159 NSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLFWQA-KQPSRI 237 (354)
T ss_pred ECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHh-cCHHHH
Confidence 999999999999999999999999987543211110000 0000000 000000000000000 000 00000
Q ss_pred ---------cccccchhhhhhhhc-CCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHH
Q 024065 155 ---------SMLFGREFLTIKIYQ-LCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQF 224 (273)
Q Consensus 155 ---------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~ 224 (273)
......+++...... ............... .+...............+++|+++|+|++|.++|.+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~v~~~~ 314 (354)
T PLN02578 238 ESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMS---RFLFNQSRYTLDSLLSKLSCPLLLLWGDLDPWVGPAK 314 (354)
T ss_pred HHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHH---HHhcCCCCCCHHHHhhcCCCCEEEEEeCCCCCCCHHH
Confidence 000000111111000 000000000000000 0000000001111234569999999999999999999
Q ss_pred HHHHHHhCCCceEEEEecCCccccccChHhHHHHHHHHHh
Q 024065 225 QHWMIQNYPVNEVMEIKGGDHMAMLSDPQKLCDCLSQISL 264 (273)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 264 (273)
.+.+.+.+|+++++++ ++||+++.|+|+++++.|.+|++
T Consensus 315 ~~~l~~~~p~a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 315 AEKIKAFYPDTTLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred HHHHHHhCCCCEEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 9999999999999999 59999999999999999999986
No 17
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=1.9e-35 Score=231.11 Aligned_cols=245 Identities=13% Similarity=0.106 Sum_probs=156.8
Q ss_pred CCceEEEEccCCCchhh-HHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCC-----CCCcEE
Q 024065 8 EEKHFVLVHGVNHGAWC-WYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP-----AEEKVI 81 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~-~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~-----~~~~~~ 81 (273)
.+++|||+||++++... |..+++.|.++||+|+++|+||||.|+.+.....+++++++|+.++++.+. ...+++
T Consensus 86 ~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~ 165 (349)
T PLN02385 86 PKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSF 165 (349)
T ss_pred CCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhccccCCCCEE
Confidence 46789999999988765 688999999889999999999999998764444588999999999988761 123799
Q ss_pred EEEechhHHHHHHHHHHCCCccceeEEeeccCCCCCCC-cchhHhhhhhhccCCCccchhhhhhhccCCCCCcccccccc
Q 024065 82 LVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHR-PSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGR 160 (273)
Q Consensus 82 lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (273)
|+||||||.+++.++.++|++++++|+++|........ .......+...+......+. ... ........+..
T Consensus 166 LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-----~~~--~~~~~~~~~~~ 238 (349)
T PLN02385 166 LFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQILILLANLLPKAK-----LVP--QKDLAELAFRD 238 (349)
T ss_pred EEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHHHHHHHHHCCCce-----ecC--CCccccccccC
Confidence 99999999999999999999999999999864321111 11111111110000000000 000 00000000000
Q ss_pred hh---hhhh-hhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhC--CC
Q 024065 161 EF---LTIK-IYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNY--PV 234 (273)
Q Consensus 161 ~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~--~~ 234 (273)
.. .... .................. .. .........+++|+|+|+|++|.++|++..+.+.+.+ ++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~-------~~--~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~ 309 (349)
T PLN02385 239 LKKRKMAEYNVIAYKDKPRLRTAVELLR-------TT--QEIEMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSD 309 (349)
T ss_pred HHHHHHhhcCcceeCCCcchHHHHHHHH-------HH--HHHHHhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCC
Confidence 00 0000 000000000000000000 00 0011123446999999999999999999999998887 56
Q ss_pred ceEEEEecCCccccccChHh----HHHHHHHHHhcccc
Q 024065 235 NEVMEIKGGDHMAMLSDPQK----LCDCLSQISLNRHD 268 (273)
Q Consensus 235 ~~~~~~~~~gH~~~~~~~~~----~~~~i~~fl~~~~~ 268 (273)
+++++++++||+++.++|++ +.+.|.+||++...
T Consensus 310 ~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 310 KKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred ceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhcc
Confidence 89999999999999999976 88889999987654
No 18
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=100.00 E-value=5.3e-35 Score=220.27 Aligned_cols=242 Identities=14% Similarity=0.230 Sum_probs=160.7
Q ss_pred CCCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEec
Q 024065 7 MEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHS 86 (273)
Q Consensus 7 ~~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S 86 (273)
.++|+|||+||+++++..|..+++.|.+ +|+|+++|+||||.|+.+....++++++++++.++++.+ +.++++++|||
T Consensus 11 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~l~G~S 88 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGSYWAPQLDVLTQ-RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL-NIERFHFVGHA 88 (257)
T ss_pred CCCCEEEEEcCCCcchhHHHHHHHHHHh-ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh-CCCcEEEEEec
Confidence 3578999999999999999999988876 599999999999999876556689999999999999999 88999999999
Q ss_pred hhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccC-CCccchhhhhhhccCCCCCcccccccchhhhh
Q 024065 87 LGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGK-EDDSWLDTQFSQCDASNPSHISMLFGREFLTI 165 (273)
Q Consensus 87 ~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (273)
|||.+++.++.++|++|+++|++++........ ..........+.. ....+.... .. ..+...++..
T Consensus 89 ~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~----------~~~~~~~~~~ 156 (257)
T TIGR03611 89 LGGLIGLQLALRYPERLLSLVLINAWSRPDPHT-RRCFDVRIALLQHAGPEAYVHAQ-AL----------FLYPADWISE 156 (257)
T ss_pred hhHHHHHHHHHHChHHhHHheeecCCCCCChhH-HHHHHHHHHHHhccCcchhhhhh-hh----------hhccccHhhc
Confidence 999999999999999999999998753321110 0000000000000 000000000 00 0000000000
Q ss_pred hhhcCCCchhHHHhhhhccCCccc---cccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCCCceEEEEec
Q 024065 166 KIYQLCPPEDLELAKMLVRPGSMF---IDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKG 242 (273)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (273)
...... ........... ..... ...+...........+++|+++++|++|.++|++..+.+.+.+++++++.+++
T Consensus 157 ~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (257)
T TIGR03611 157 NAARLA-ADEAHALAHFP-GKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALPNAQLKLLPY 234 (257)
T ss_pred cchhhh-hhhhhcccccC-ccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcCCceEEEECC
Confidence 000000 00000000000 00000 00001111112244568999999999999999999999999999999999999
Q ss_pred CCccccccChHhHHHHHHHHHh
Q 024065 243 GDHMAMLSDPQKLCDCLSQISL 264 (273)
Q Consensus 243 ~gH~~~~~~~~~~~~~i~~fl~ 264 (273)
+||++++++|+++++.|.+||+
T Consensus 235 ~gH~~~~~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 235 GGHASNVTDPETFNRALLDFLK 256 (257)
T ss_pred CCCCccccCHHHHHHHHHHHhc
Confidence 9999999999999999999986
No 19
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=100.00 E-value=2.9e-35 Score=224.21 Aligned_cols=251 Identities=20% Similarity=0.260 Sum_probs=162.7
Q ss_pred CCCceEEEEccCCCchhhHHHHHHHHhhC-CcEEEEeccCCCC-CCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEE
Q 024065 7 MEEKHFVLVHGVNHGAWCWYKLKARLVAG-GHRVTAVDLAASG-INMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVG 84 (273)
Q Consensus 7 ~~~~~vv~lhG~~~~~~~~~~~~~~l~~~-g~~vi~~d~~G~G-~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG 84 (273)
..+++||++|||+++...|+.++..|.++ |++|+++|++|+| .|..+.+..|+..++++.+..++... ..++++++|
T Consensus 56 ~~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~-~~~~~~lvg 134 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEV-FVEPVSLVG 134 (326)
T ss_pred CCCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhh-cCcceEEEE
Confidence 35899999999999999999999999876 4899999999999 55555556699999999999999999 888899999
Q ss_pred echhHHHHHHHHHHCCCccceeE---EeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCCcccccccch
Q 024065 85 HSLGGVTLALAADKFPHKISVAV---FVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGRE 161 (273)
Q Consensus 85 ~S~Gg~~a~~~a~~~p~~v~~li---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (273)
||+||.+|+.+|+.+|+.|++++ ++++.................... .....+....... + ...+...
T Consensus 135 hS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~------~--~~~~~~~ 205 (326)
T KOG1454|consen 135 HSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFL-SALELLIPLSLTE------P--VRLVSEG 205 (326)
T ss_pred eCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhc-cHhhhcCcccccc------c--hhheeHh
Confidence 99999999999999999999999 554443322222111111111000 0000000000000 0 0000000
Q ss_pred hhhhhhhcCCC-chhHHH-hhhhccC-------C--ccccccccc--cCcCCccCcc-cceEEEEeecCCCCCCHHHHHH
Q 024065 162 FLTIKIYQLCP-PEDLEL-AKMLVRP-------G--SMFIDNLSK--ESKFSDEGYG-SVKRVYLVCEEDIGLPKQFQHW 227 (273)
Q Consensus 162 ~~~~~~~~~~~-~~~~~~-~~~~~~~-------~--~~~~~~~~~--~~~~~~~~~~-~~Pvl~i~g~~D~~~~~~~~~~ 227 (273)
........... ...... .....+. . ..+...+.. .........+ ++|+|+++|++|+++|.+.++.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~ 285 (326)
T KOG1454|consen 206 LLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEE 285 (326)
T ss_pred hhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHH
Confidence 00000000000 000000 0000000 0 000011111 1111122333 5999999999999999999999
Q ss_pred HHHhCCCceEEEEecCCccccccChHhHHHHHHHHHhccc
Q 024065 228 MIQNYPVNEVMEIKGGDHMAMLSDPQKLCDCLSQISLNRH 267 (273)
Q Consensus 228 ~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 267 (273)
+.+.+||+++++++++||.+++|+|+++++.|..|++...
T Consensus 286 ~~~~~pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 286 LKKKLPNAELVEIPGAGHLPHLERPEEVAALLRSFIARLR 325 (326)
T ss_pred HHhhCCCceEEEeCCCCcccccCCHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999998754
No 20
>PRK06489 hypothetical protein; Provisional
Probab=100.00 E-value=1.2e-34 Score=227.33 Aligned_cols=247 Identities=11% Similarity=0.121 Sum_probs=152.4
Q ss_pred CceEEEEccCCCchhhHH--HHHHHH-------hhCCcEEEEeccCCCCCCCCCcCC------CcchhhchHHHHHHH-H
Q 024065 9 EKHFVLVHGVNHGAWCWY--KLKARL-------VAGGHRVTAVDLAASGINMKRIED------VHTFHAYSEPLMEVL-A 72 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~~--~~~~~l-------~~~g~~vi~~d~~G~G~s~~~~~~------~~~~~~~~~~l~~~l-~ 72 (273)
+|+|||+||++++...|. .+.+.| ..++|+|+++|+||||.|+.+... .++++++++++.+++ +
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~ 148 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTE 148 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHH
Confidence 689999999999988885 555554 134699999999999999865431 478999999988865 7
Q ss_pred hCCCCCcEE-EEEechhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccch-----------h
Q 024065 73 SLPAEEKVI-LVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWL-----------D 140 (273)
Q Consensus 73 ~~~~~~~~~-lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~ 140 (273)
++ +.++++ ++||||||.+|+.+|.++|++|+++|++++..................... ....+. .
T Consensus 149 ~l-gi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 226 (360)
T PRK06489 149 GL-GVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWRRMLIESIR-NDPAWNNGNYTTQPPSLK 226 (360)
T ss_pred hc-CCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHHHHHHHHHH-hCCCCCCCCCCCCHHHHH
Confidence 78 888885 899999999999999999999999999987532111100000000000000 000000 0
Q ss_pred hhhhh---ccCCCC------CcccccccchhhhhhhhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEE
Q 024065 141 TQFSQ---CDASNP------SHISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVY 211 (273)
Q Consensus 141 ~~~~~---~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~ 211 (273)
..... ... .. ...........+.................. .......+....+..+++|+|+
T Consensus 227 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~d~~~~L~~I~~PvLv 297 (360)
T PRK06489 227 RANPMFAIATS-GGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFLYQ--------WDSSRDYNPSPDLEKIKAPVLA 297 (360)
T ss_pred HHHHHHHHHHh-CCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHHHH--------HHHhhccChHHHHHhCCCCEEE
Confidence 00000 000 00 000000000000000000000000000000 0001111122335567999999
Q ss_pred EeecCCCCCCHHHH--HHHHHhCCCceEEEEecC----CccccccChHhHHHHHHHHHhccc
Q 024065 212 LVCEEDIGLPKQFQ--HWMIQNYPVNEVMEIKGG----DHMAMLSDPQKLCDCLSQISLNRH 267 (273)
Q Consensus 212 i~g~~D~~~~~~~~--~~~~~~~~~~~~~~~~~~----gH~~~~~~~~~~~~~i~~fl~~~~ 267 (273)
|+|++|.++|++.. +.+.+.+|++++++++++ ||+++ ++|+++++.|.+||++..
T Consensus 298 I~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~~~~ 358 (360)
T PRK06489 298 INSADDERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGTT-GSAKFWKAYLAEFLAQVP 358 (360)
T ss_pred EecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCcccc-cCHHHHHHHHHHHHHhcc
Confidence 99999999999875 789999999999999986 99997 899999999999998654
No 21
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=100.00 E-value=3.3e-34 Score=214.30 Aligned_cols=239 Identities=18% Similarity=0.170 Sum_probs=149.8
Q ss_pred CCCCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEe
Q 024065 6 GMEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGH 85 (273)
Q Consensus 6 g~~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~ 85 (273)
|++.|+|||+||++++...|..+.+.|.+ +|+|+++|+||||.|+... .++++++++++.+.+ .++++++||
T Consensus 1 g~g~~~iv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~~--~~~~~~~~~~~~~~~-----~~~~~lvG~ 72 (245)
T TIGR01738 1 GQGNVHLVLIHGWGMNAEVFRCLDEELSA-HFTLHLVDLPGHGRSRGFG--PLSLADAAEAIAAQA-----PDPAIWLGW 72 (245)
T ss_pred CCCCceEEEEcCCCCchhhHHHHHHhhcc-CeEEEEecCCcCccCCCCC--CcCHHHHHHHHHHhC-----CCCeEEEEE
Confidence 34458999999999999999999999986 5999999999999987543 257777777665432 268999999
Q ss_pred chhHHHHHHHHHHCCCccceeEEeeccCCCCCCC-cc-----hhHhhhhhhccCCCccchhhhhhhccCCCCCccccccc
Q 024065 86 SLGGVTLALAADKFPHKISVAVFVTAFMPDTTHR-PS-----FVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFG 159 (273)
Q Consensus 86 S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (273)
||||.+++.++.++|++++++|++++........ .. .....+..................... ... .... .
T Consensus 73 S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~-~ 149 (245)
T TIGR01738 73 SLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTL-GTP-TARQ-D 149 (245)
T ss_pred cHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHh-cCC-ccch-H
Confidence 9999999999999999999999998754221111 00 011111110100000000000000000 000 0000 0
Q ss_pred chhhhhhhhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCCCceEEE
Q 024065 160 REFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVME 239 (273)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~ 239 (273)
...+...+............ .. ...+...........+++|+++++|++|.++|++..+.+.+.++++++++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~ 221 (245)
T TIGR01738 150 ARALKQTLLARPTPNVQVLQ-AG-------LEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPHSELYI 221 (245)
T ss_pred HHHHHHHhhccCCCCHHHHH-HH-------HHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCCCCeEEE
Confidence 00000000000000000000 00 00011111112234569999999999999999999999999999999999
Q ss_pred EecCCccccccChHhHHHHHHHHH
Q 024065 240 IKGGDHMAMLSDPQKLCDCLSQIS 263 (273)
Q Consensus 240 ~~~~gH~~~~~~~~~~~~~i~~fl 263 (273)
++++||++++|+|+++++.|.+|+
T Consensus 222 ~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 222 FAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred eCCCCCCccccCHHHHHHHHHhhC
Confidence 999999999999999999999986
No 22
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=100.00 E-value=3.3e-34 Score=213.94 Aligned_cols=232 Identities=16% Similarity=0.093 Sum_probs=146.1
Q ss_pred CCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEech
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSL 87 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~ 87 (273)
++|+|||+||++++...|+.+++.| + +|+|+++|+||||.|+.+.. .+++++++++.++++++ +.++++++||||
T Consensus 1 ~~p~vvllHG~~~~~~~w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~~--~~~~~~~~~l~~~l~~~-~~~~~~lvG~S~ 75 (242)
T PRK11126 1 GLPWLVFLHGLLGSGQDWQPVGEAL-P-DYPRLYIDLPGHGGSAAISV--DGFADVSRLLSQTLQSY-NILPYWLVGYSL 75 (242)
T ss_pred CCCEEEEECCCCCChHHHHHHHHHc-C-CCCEEEecCCCCCCCCCccc--cCHHHHHHHHHHHHHHc-CCCCeEEEEECH
Confidence 3689999999999999999999988 4 59999999999999987653 48999999999999999 889999999999
Q ss_pred hHHHHHHHHHHCCCc-cceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhh--------hhhhccCCCCCcccccc
Q 024065 88 GGVTLALAADKFPHK-ISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDT--------QFSQCDASNPSHISMLF 158 (273)
Q Consensus 88 Gg~~a~~~a~~~p~~-v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~ 158 (273)
||.+|+.+|.++|+. |++++++++....... ......... ...|... ...... ... ....+
T Consensus 76 Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~--~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~ 145 (242)
T PRK11126 76 GGRIAMYYACQGLAGGLCGLIVEGGNPGLQNA--EERQARWQN-----DRQWAQRFRQEPLEQVLADWY--QQP-VFASL 145 (242)
T ss_pred HHHHHHHHHHhCCcccccEEEEeCCCCCCCCH--HHHHHHHhh-----hHHHHHHhccCcHHHHHHHHH--hcc-hhhcc
Confidence 999999999999765 9999998765321110 000000000 0001000 000000 000 00000
Q ss_pred cchhhhhhhhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCCCceEE
Q 024065 159 GREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVM 238 (273)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 238 (273)
................... ......... .............+++|+++++|++|..+. .+.+. .+++++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~-~~~~~~ 214 (242)
T PRK11126 146 NAEQRQQLVAKRSNNNGAA-VAAMLEATS----LAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQ-LALPLH 214 (242)
T ss_pred CccHHHHHHHhcccCCHHH-HHHHHHhcC----cccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHH-hcCeEE
Confidence 0100000000000000000 000000000 000011112345569999999999998652 22333 378999
Q ss_pred EEecCCccccccChHhHHHHHHHHHhc
Q 024065 239 EIKGGDHMAMLSDPQKLCDCLSQISLN 265 (273)
Q Consensus 239 ~~~~~gH~~~~~~~~~~~~~i~~fl~~ 265 (273)
+++++||++++|+|+++++.|.+|+++
T Consensus 215 ~i~~~gH~~~~e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 215 VIPNAGHNAHRENPAAFAASLAQILRL 241 (242)
T ss_pred EeCCCCCchhhhChHHHHHHHHHHHhh
Confidence 999999999999999999999999975
No 23
>PHA02857 monoglyceride lipase; Provisional
Probab=100.00 E-value=1.2e-33 Score=214.90 Aligned_cols=238 Identities=14% Similarity=0.114 Sum_probs=152.0
Q ss_pred CCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhC---CCCCcEEEEE
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL---PAEEKVILVG 84 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~lvG 84 (273)
.++.|+++||+++++..|..+++.|.++||+|+++|+||||.|+.......++.++++|+.+.++.+ ....+++++|
T Consensus 24 ~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG 103 (276)
T PHA02857 24 PKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLG 103 (276)
T ss_pred CCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEE
Confidence 3566777799999999999999999999999999999999999764333346666777777777653 1346899999
Q ss_pred echhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCCcccccccchhhh
Q 024065 85 HSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLT 164 (273)
Q Consensus 85 ~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (273)
|||||.+|+.+|.++|++++++|+++|..................... ........ .. ...+......
T Consensus 104 ~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~-------~~~~~~~~~~ 171 (276)
T PHA02857 104 HSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIF-YPNKIVGK----LC-------PESVSRDMDE 171 (276)
T ss_pred cCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHHHHHHHh-CCCCccCC----CC-------HhhccCCHHH
Confidence 999999999999999999999999998643211110100010000000 00000000 00 0000000000
Q ss_pred hhhhcCCC-----chhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhC-CCceEE
Q 024065 165 IKIYQLCP-----PEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNY-PVNEVM 238 (273)
Q Consensus 165 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~-~~~~~~ 238 (273)
...+...+ ............ .. ......+..+++|+|+++|++|.++|++..+.+.+.+ ++++++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~-~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~ 242 (276)
T PHA02857 172 VYKYQYDPLVNHEKIKAGFASQVLK--------AT-NKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNREIK 242 (276)
T ss_pred HHHHhcCCCccCCCccHHHHHHHHH--------HH-HHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCceEE
Confidence 00000000 000000000000 00 0011223456999999999999999999999998876 468999
Q ss_pred EEecCCccccccCh---HhHHHHHHHHHhcc
Q 024065 239 EIKGGDHMAMLSDP---QKLCDCLSQISLNR 266 (273)
Q Consensus 239 ~~~~~gH~~~~~~~---~~~~~~i~~fl~~~ 266 (273)
+++++||.++.|++ +++.+.+.+||++.
T Consensus 243 ~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 243 IYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred EeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 99999999999976 57889999999875
No 24
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=100.00 E-value=3.4e-34 Score=214.98 Aligned_cols=239 Identities=14% Similarity=0.185 Sum_probs=157.6
Q ss_pred CCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEech
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSL 87 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~ 87 (273)
++|+|||+||++.+...|..+++.|.+ ||+|+++|+||||.|+.+. ..++++++++++.++++.+ +.++++++|||+
T Consensus 12 ~~~~li~~hg~~~~~~~~~~~~~~l~~-~~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~~~~~i~~~-~~~~v~liG~S~ 88 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRMWDPVLPALTP-DFRVLRYDKRGHGLSDAPE-GPYSIEDLADDVLALLDHL-GIERAVFCGLSL 88 (251)
T ss_pred CCCeEEEEcCcccchhhHHHHHHHhhc-ccEEEEecCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHh-CCCceEEEEeCc
Confidence 478899999999999999999999875 7999999999999997654 3469999999999999999 788999999999
Q ss_pred hHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccC-CCccchhhhhhhccCCCCCcccccccchhhhhh
Q 024065 88 GGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGK-EDDSWLDTQFSQCDASNPSHISMLFGREFLTIK 166 (273)
Q Consensus 88 Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (273)
||.+++.+|.++|++|+++|++++......... .......... ............... .............+...
T Consensus 89 Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 164 (251)
T TIGR02427 89 GGLIAQGLAARRPDRVRALVLSNTAAKIGTPES---WNARIAAVRAEGLAALADAVLERWFT-PGFREAHPARLDLYRNM 164 (251)
T ss_pred hHHHHHHHHHHCHHHhHHHhhccCccccCchhh---HHHHHhhhhhccHHHHHHHHHHHHcc-cccccCChHHHHHHHHH
Confidence 999999999999999999999986533211110 0000000000 000000000000000 00000000000000000
Q ss_pred hhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCCCceEEEEecCCcc
Q 024065 167 IYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDHM 246 (273)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 246 (273)
+... ........ ...+...........+++|+++++|++|.++|.+..+.+.+.+++.++++++++||+
T Consensus 165 ~~~~-~~~~~~~~----------~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 233 (251)
T TIGR02427 165 LVRQ-PPDGYAGC----------CAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVPGARFAEIRGAGHI 233 (251)
T ss_pred HHhc-CHHHHHHH----------HHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCCCceEEEECCCCCc
Confidence 0000 00000000 000111111122344589999999999999999999999999999999999999999
Q ss_pred ccccChHhHHHHHHHHHh
Q 024065 247 AMLSDPQKLCDCLSQISL 264 (273)
Q Consensus 247 ~~~~~~~~~~~~i~~fl~ 264 (273)
+++++|+++.+.|.+|++
T Consensus 234 ~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 234 PCVEQPEAFNAALRDFLR 251 (251)
T ss_pred ccccChHHHHHHHHHHhC
Confidence 999999999999999974
No 25
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=100.00 E-value=7e-35 Score=215.47 Aligned_cols=227 Identities=21% Similarity=0.320 Sum_probs=150.3
Q ss_pred EEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcC-CCcchhhchHHHHHHHHhCCCCCcEEEEEechhHH
Q 024065 12 FVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIE-DVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGV 90 (273)
Q Consensus 12 vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg~ 90 (273)
|||+||++++...|..+++.|+ +||+|+++|+||||.|+.+.. ..++++++++|+.++++++ +.++++++|||+||.
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~lvG~S~Gg~ 78 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDAL-GIKKVILVGHSMGGM 78 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHT-TTSSEEEEEETHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccc-ccccccccccccccc
Confidence 7999999999999999999995 689999999999999987664 3478999999999999999 779999999999999
Q ss_pred HHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCCcccccccchhhhhhhhcC
Q 024065 91 TLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQL 170 (273)
Q Consensus 91 ~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (273)
+++.++.++|++|+++|++++...............+.... ............ .......+...........
T Consensus 79 ~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~- 150 (228)
T PF12697_consen 79 IALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRL----LAWRSRSLRRLA---SRFFYRWFDGDEPEDLIRS- 150 (228)
T ss_dssp HHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHH----HHHHHHHHHHHH---HHHHHHHHTHHHHHHHHHH-
T ss_pred cccccccccccccccceeecccccccccccccccchhhhhh----hhcccccccccc---ccccccccccccccccccc-
Confidence 99999999999999999999875321100000001111111 000000000000 0000000001111111100
Q ss_pred CCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCCCceEEEEecCCcccccc
Q 024065 171 CPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDHMAMLS 250 (273)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 250 (273)
............ .. ..........+++|+++++|++|.+++.+..+.+.+.++++++++++++||+++++
T Consensus 151 ----~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 220 (228)
T PF12697_consen 151 ----SRRALAEYLRSN-LW-----QADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLPNAELVVIPGAGHFLFLE 220 (228)
T ss_dssp ----HHHHHHHHHHHH-HH-----HHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHSTTEEEEEETTSSSTHHHH
T ss_pred ----cccccccccccc-cc-----cccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCccHHH
Confidence 000000000000 00 00011123334899999999999999999999999999999999999999999999
Q ss_pred ChHhHHHH
Q 024065 251 DPQKLCDC 258 (273)
Q Consensus 251 ~~~~~~~~ 258 (273)
+|++++++
T Consensus 221 ~p~~~~~a 228 (228)
T PF12697_consen 221 QPDEVAEA 228 (228)
T ss_dssp SHHHHHHH
T ss_pred CHHHHhcC
Confidence 99999864
No 26
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=3e-33 Score=217.54 Aligned_cols=242 Identities=14% Similarity=0.101 Sum_probs=153.0
Q ss_pred CCceEEEEccCCCch-hhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCC-----CCCcEE
Q 024065 8 EEKHFVLVHGVNHGA-WCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP-----AEEKVI 81 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~-~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~-----~~~~~~ 81 (273)
.+++|||+||++.+. ..|..+...|.++||+|+++|+||||.|+.......+++.+++|+.++++.+. ...+++
T Consensus 58 ~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~ 137 (330)
T PLN02298 58 PRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRF 137 (330)
T ss_pred CceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEE
Confidence 356799999998664 35677888899889999999999999997654434588899999999998771 124799
Q ss_pred EEEechhHHHHHHHHHHCCCccceeEEeeccCCCCCCCc-chhHh---hhhhhccCCCccchhhhhhhccCCCCCccccc
Q 024065 82 LVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRP-SFVLE---QYSEKMGKEDDSWLDTQFSQCDASNPSHISML 157 (273)
Q Consensus 82 lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (273)
|+||||||.+++.++.++|++|+++|++++......... ..... .+.... . ...... . ........
T Consensus 138 l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~-----~--~~~~~~~~ 207 (330)
T PLN02298 138 LYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPIPQILTFVARF--L-PTLAIV-----P--TADLLEKS 207 (330)
T ss_pred EEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHHHHHHHHHHHH--C-CCCccc-----c--CCCccccc
Confidence 999999999999999999999999999998643221100 00011 111111 0 000000 0 00000000
Q ss_pred ccchhhhhhhhcCCC-----chhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhC
Q 024065 158 FGREFLTIKIYQLCP-----PEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNY 232 (273)
Q Consensus 158 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~ 232 (273)
..... ...+....+ ............ ... ........+++|+|+++|++|.++|++..+.+.+.+
T Consensus 208 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~--~~~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i 277 (330)
T PLN02298 208 VKVPA-KKIIAKRNPMRYNGKPRLGTVVELLR-------VTD--YLGKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEA 277 (330)
T ss_pred ccCHH-HHHHHHhCccccCCCccHHHHHHHHH-------HHH--HHHHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHh
Confidence 00000 000000000 000000000000 000 001123445899999999999999999999988876
Q ss_pred C--CceEEEEecCCccccccChH----hHHHHHHHHHhccccc
Q 024065 233 P--VNEVMEIKGGDHMAMLSDPQ----KLCDCLSQISLNRHDI 269 (273)
Q Consensus 233 ~--~~~~~~~~~~gH~~~~~~~~----~~~~~i~~fl~~~~~~ 269 (273)
+ +.++++++++||.+++++|+ .+.+.|.+||.+....
T Consensus 278 ~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~ 320 (330)
T PLN02298 278 KSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCTG 320 (330)
T ss_pred ccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhccC
Confidence 4 78999999999999998885 4677888999887543
No 27
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=100.00 E-value=2.8e-33 Score=218.29 Aligned_cols=252 Identities=14% Similarity=0.104 Sum_probs=152.7
Q ss_pred cCCCCceEEEEccCCCchh------------hHHHHHH---HHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHH
Q 024065 5 VGMEEKHFVLVHGVNHGAW------------CWYKLKA---RLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLME 69 (273)
Q Consensus 5 ~g~~~~~vv~lhG~~~~~~------------~~~~~~~---~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~ 69 (273)
.|++++++||+||+.++.. .|..+++ .|..++|+||++|+||||.|... .++++++++|+.+
T Consensus 53 ~G~~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~---~~~~~~~a~dl~~ 129 (343)
T PRK08775 53 IGPAGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLDV---PIDTADQADAIAL 129 (343)
T ss_pred eccCCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCCC---CCCHHHHHHHHHH
Confidence 4543556788877766655 6888886 57434599999999999988432 3688999999999
Q ss_pred HHHhCCCCCc-EEEEEechhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhh---ccCCCc-cchh-hhh
Q 024065 70 VLASLPAEEK-VILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEK---MGKEDD-SWLD-TQF 143 (273)
Q Consensus 70 ~l~~~~~~~~-~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~-~~~ 143 (273)
+++++ +.++ ++++||||||++|+.+|.++|++|+++|++++..... ............ ...... .... ...
T Consensus 130 ll~~l-~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (343)
T PRK08775 130 LLDAL-GIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAH--PYAAAWRALQRRAVALGQLQCAEKHGLALA 206 (343)
T ss_pred HHHHc-CCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCC--HHHHHHHHHHHHHHHcCCCCCCchhHHHHH
Confidence 99999 8766 4799999999999999999999999999999863221 100001110000 000000 0000 000
Q ss_pred hhccCCCCCcccccccchhhhhhhhcCCC-------chhHHHhh----hhc-cCC-ccccccccccC-cCCccCcccceE
Q 024065 144 SQCDASNPSHISMLFGREFLTIKIYQLCP-------PEDLELAK----MLV-RPG-SMFIDNLSKES-KFSDEGYGSVKR 209 (273)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~----~~~-~~~-~~~~~~~~~~~-~~~~~~~~~~Pv 209 (273)
.... . ........+...+..... ........ ... ... ..+........ .......+++|+
T Consensus 207 ~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~~Pt 280 (343)
T PRK08775 207 RQLA--M----LSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESIDLHRVDPEAIRVPT 280 (343)
T ss_pred HHHH--H----HHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHHhhcCCChhcCCCCe
Confidence 0000 0 000000000000100000 00000000 000 000 00000000000 111245679999
Q ss_pred EEEeecCCCCCCHHHHHHHHHhC-CCceEEEEec-CCccccccChHhHHHHHHHHHhcccc
Q 024065 210 VYLVCEEDIGLPKQFQHWMIQNY-PVNEVMEIKG-GDHMAMLSDPQKLCDCLSQISLNRHD 268 (273)
Q Consensus 210 l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~-~gH~~~~~~~~~~~~~i~~fl~~~~~ 268 (273)
|+++|++|.++|++..+.+.+.+ |+++++++++ +||++++|+|++|++.|.+||++...
T Consensus 281 Lvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~~~~ 341 (343)
T PRK08775 281 VVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILTTALRSTGE 341 (343)
T ss_pred EEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHhccc
Confidence 99999999999999888888887 7999999985 99999999999999999999987654
No 28
>PRK10749 lysophospholipase L2; Provisional
Probab=100.00 E-value=7e-33 Score=214.76 Aligned_cols=248 Identities=14% Similarity=0.126 Sum_probs=154.2
Q ss_pred CCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcC-----CCcchhhchHHHHHHHHhC---CCCCc
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIE-----DVHTFHAYSEPLMEVLASL---PAEEK 79 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~-----~~~~~~~~~~~l~~~l~~~---~~~~~ 79 (273)
.+++||++||++++...|..++..|.++||+|+++|+||||.|+.+.. ...+++++++|+.++++.+ .+..+
T Consensus 53 ~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 132 (330)
T PRK10749 53 HDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGPYRK 132 (330)
T ss_pred CCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCCCCC
Confidence 467899999999999999999999988999999999999999975432 2248899999999998875 14578
Q ss_pred EEEEEechhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCC-CCCccccc-
Q 024065 80 VILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDAS-NPSHISML- 157 (273)
Q Consensus 80 ~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~- 157 (273)
++++||||||.+++.++.++|++++++|+++|...............+..... ...............+ ........
T Consensus 133 ~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l 211 (330)
T PRK10749 133 RYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRILNWAE-GHPRIRDGYAIGTGRWRPLPFAINVL 211 (330)
T ss_pred eEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHHHHHHH-HhcCCCCcCCCCCCCCCCCCcCCCCC
Confidence 99999999999999999999999999999988643211111111111110000 0000000000000000 00000000
Q ss_pred -ccchhh---hhhhhcCCCc----hhHHHhhhhccCCccccccccc-cCcCCccCcccceEEEEeecCCCCCCHHHHHHH
Q 024065 158 -FGREFL---TIKIYQLCPP----EDLELAKMLVRPGSMFIDNLSK-ESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWM 228 (273)
Q Consensus 158 -~~~~~~---~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~ 228 (273)
..+... .+.+...... ....... ..+.. .........+++|+|+++|++|.+++++..+.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~i~~P~Lii~G~~D~vv~~~~~~~~ 281 (330)
T PRK10749 212 THSRERYRRNLRFYADDPELRVGGPTYHWVR----------ESILAGEQVLAGAGDITTPLLLLQAEEERVVDNRMHDRF 281 (330)
T ss_pred CCCHHHHHHHHHHHHhCCCcccCCCcHHHHH----------HHHHHHHHHHhhccCCCCCEEEEEeCCCeeeCHHHHHHH
Confidence 000000 0000000000 0000000 00000 000112344589999999999999999998888
Q ss_pred HHhC-------CCceEEEEecCCccccccCh---HhHHHHHHHHHhcc
Q 024065 229 IQNY-------PVNEVMEIKGGDHMAMLSDP---QKLCDCLSQISLNR 266 (273)
Q Consensus 229 ~~~~-------~~~~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~~~ 266 (273)
.+.+ +++++++++++||.++.|.+ +.+.+.|.+||+++
T Consensus 282 ~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 282 CEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred HHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 7765 35589999999999999876 66888999999764
No 29
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=100.00 E-value=5.9e-33 Score=203.68 Aligned_cols=252 Identities=18% Similarity=0.214 Sum_probs=156.1
Q ss_pred CCCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCC---CcchhhchHHHHHHHHhCCCCCcEEEE
Q 024065 7 MEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIED---VHTFHAYSEPLMEVLASLPAEEKVILV 83 (273)
Q Consensus 7 ~~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~---~~~~~~~~~~l~~~l~~~~~~~~~~lv 83 (273)
.+++++||+||+|++...|-.-.+.|++. ++|+++|++|+|+|++|.-. ......+++-++++.... +.++.+|+
T Consensus 88 ~~~~plVliHGyGAg~g~f~~Nf~~La~~-~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~-~L~Kmilv 165 (365)
T KOG4409|consen 88 ANKTPLVLIHGYGAGLGLFFRNFDDLAKI-RNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKM-GLEKMILV 165 (365)
T ss_pred cCCCcEEEEeccchhHHHHHHhhhhhhhc-CceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHc-CCcceeEe
Confidence 46889999999999999999999999984 99999999999999987632 223457788889999888 99999999
Q ss_pred EechhHHHHHHHHHHCCCccceeEEeeccCCCCCC-Ccc---hhHhhhhhhccCCCccchhhh--hhhccCCCCCcccc-
Q 024065 84 GHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTH-RPS---FVLEQYSEKMGKEDDSWLDTQ--FSQCDASNPSHISM- 156 (273)
Q Consensus 84 G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~- 156 (273)
|||+||.+|..||.+||++|+.|||++|....... ... .....+...+. ........+ +...++ -.+....
T Consensus 166 GHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~-~~~~~~nPl~~LR~~Gp-~Gp~Lv~~ 243 (365)
T KOG4409|consen 166 GHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALF-LVATNFNPLALLRLMGP-LGPKLVSR 243 (365)
T ss_pred eccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhh-hhhhcCCHHHHHHhccc-cchHHHhh
Confidence 99999999999999999999999999997543322 100 00011110000 000000000 000000 0000000
Q ss_pred -----------cccchhhhhhhhcCC--CchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHH
Q 024065 157 -----------LFGREFLTIKIYQLC--PPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQ 223 (273)
Q Consensus 157 -----------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~ 223 (273)
....+++.++++... .+........+..........+.+... ... .+||+++|+|++|-+ ...
T Consensus 244 ~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~--~l~-~~~pv~fiyG~~dWm-D~~ 319 (365)
T KOG4409|consen 244 LRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLR--ELK-KDVPVTFIYGDRDWM-DKN 319 (365)
T ss_pred hhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHH--hhc-cCCCEEEEecCcccc-cch
Confidence 111222222222211 111122222222211111111111100 011 169999999999855 444
Q ss_pred HHHHHHHh--CCCceEEEEecCCccccccChHhHHHHHHHHHhcc
Q 024065 224 FQHWMIQN--YPVNEVMEIKGGDHMAMLSDPQKLCDCLSQISLNR 266 (273)
Q Consensus 224 ~~~~~~~~--~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 266 (273)
...++.+. ...++.++++++||.++.++|+.|++.+.+++++.
T Consensus 320 ~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 320 AGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred hHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhcc
Confidence 55555553 23579999999999999999999999999998763
No 30
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=100.00 E-value=2e-32 Score=209.59 Aligned_cols=246 Identities=18% Similarity=0.168 Sum_probs=152.1
Q ss_pred CceEEEEccCCCchh-hHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCC--CcchhhchHHHHHHHHhCCCCCcEEEEEe
Q 024065 9 EKHFVLVHGVNHGAW-CWYKLKARLVAGGHRVTAVDLAASGINMKRIED--VHTFHAYSEPLMEVLASLPAEEKVILVGH 85 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~-~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~--~~~~~~~~~~l~~~l~~~~~~~~~~lvG~ 85 (273)
+++|||+||++++.. .|..+...+.+.||+|+++|+||||.|+.+... .++++++++++.++++++ +.++++++||
T Consensus 25 ~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~liG~ 103 (288)
T TIGR01250 25 KIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKL-GLDKFYLLGH 103 (288)
T ss_pred CCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHc-CCCcEEEEEe
Confidence 689999999865554 456666666666899999999999999865433 378999999999999999 8888999999
Q ss_pred chhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCCcccccccchhhhh
Q 024065 86 SLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTI 165 (273)
Q Consensus 86 S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (273)
||||.+++.++..+|++++++|++++....... ..........+ ............. ........+ ......
T Consensus 104 S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~ 175 (288)
T TIGR01250 104 SWGGMLAQEYALKYGQHLKGLIISSMLDSAPEY--VKELNRLRKEL---PPEVRAAIKRCEA--SGDYDNPEY-QEAVEV 175 (288)
T ss_pred ehHHHHHHHHHHhCccccceeeEecccccchHH--HHHHHHHHhhc---ChhHHHHHHHHHh--ccCcchHHH-HHHHHH
Confidence 999999999999999999999999875321110 00000110100 0000000000000 000000000 000000
Q ss_pred hh----hc-CCCchhH---------HHhhhhccCCccc-cccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHH
Q 024065 166 KI----YQ-LCPPEDL---------ELAKMLVRPGSMF-IDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQ 230 (273)
Q Consensus 166 ~~----~~-~~~~~~~---------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~ 230 (273)
.. .. ....... ............. ...+...........+++|+++++|++|.+ +++..+.+.+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~-~~~~~~~~~~ 254 (288)
T TIGR01250 176 FYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTM-TPEAAREMQE 254 (288)
T ss_pred HHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCCCcc-CHHHHHHHHH
Confidence 00 00 0000000 0000000000000 000111111122455699999999999985 6678888899
Q ss_pred hCCCceEEEEecCCccccccChHhHHHHHHHHHh
Q 024065 231 NYPVNEVMEIKGGDHMAMLSDPQKLCDCLSQISL 264 (273)
Q Consensus 231 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 264 (273)
.++++++++++++||++++++|+++++.|.+||+
T Consensus 255 ~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 255 LIAGSRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred hccCCeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 8999999999999999999999999999999984
No 31
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=100.00 E-value=2e-32 Score=205.28 Aligned_cols=244 Identities=21% Similarity=0.205 Sum_probs=153.4
Q ss_pred CceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcC-CCcchhhchHH-HHHHHHhCCCCCcEEEEEec
Q 024065 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIE-DVHTFHAYSEP-LMEVLASLPAEEKVILVGHS 86 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~-~~~~~~~~~~~-l~~~l~~~~~~~~~~lvG~S 86 (273)
+|+|||+||++++...|..+.+.|. +||+|+++|+||||.|+.+.. ...++++++++ +..+++.+ +.++++++|||
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~G~S 78 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQL-GIEPFFLVGYS 78 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHc-CCCeEEEEEec
Confidence 4789999999999999999999998 679999999999999986543 44688999999 77888888 78899999999
Q ss_pred hhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhH----hhhhhhccC-CCccchhhhhhhccCCCCCcccccccch
Q 024065 87 LGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVL----EQYSEKMGK-EDDSWLDTQFSQCDASNPSHISMLFGRE 161 (273)
Q Consensus 87 ~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (273)
+||.+++.+|.++|++|++++++++............. ..+...+.. ....+.......... .. .......
T Consensus 79 ~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~ 154 (251)
T TIGR03695 79 MGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLF-AS---QKNLPPE 154 (251)
T ss_pred cHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCcee-ee---cccCChH
Confidence 99999999999999999999999875321111000000 000000000 000000000000000 00 0000000
Q ss_pred hhhhhhhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCCCceEEEEe
Q 024065 162 FLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIK 241 (273)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 241 (273)
....................+.... .............+++|+++++|++|..++ +..+.+.+..+++++++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~~~~~~~~ 228 (251)
T TIGR03695 155 QRQALRAKRLANNPEGLAKMLRATG-----LGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLLPNLTLVIIA 228 (251)
T ss_pred HhHHHHHhcccccchHHHHHHHHhh-----hhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcCCCCcEEEEc
Confidence 0000000000000000000000000 000001111234568999999999998764 5677788888999999999
Q ss_pred cCCccccccChHhHHHHHHHHHh
Q 024065 242 GGDHMAMLSDPQKLCDCLSQISL 264 (273)
Q Consensus 242 ~~gH~~~~~~~~~~~~~i~~fl~ 264 (273)
++||++++++|+++++.|.+|++
T Consensus 229 ~~gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 229 NAGHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred CCCCCcCccChHHHHHHHHHHhC
Confidence 99999999999999999999984
No 32
>PRK07581 hypothetical protein; Validated
Probab=100.00 E-value=1.6e-33 Score=219.78 Aligned_cols=253 Identities=11% Similarity=0.064 Sum_probs=149.0
Q ss_pred CceEEEEccCCCchhhHHHHH---HHHhhCCcEEEEeccCCCCCCCCCcC--CCcchhh-----chHHHHH----HHHhC
Q 024065 9 EKHFVLVHGVNHGAWCWYKLK---ARLVAGGHRVTAVDLAASGINMKRIE--DVHTFHA-----YSEPLME----VLASL 74 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~~~~~---~~l~~~g~~vi~~d~~G~G~s~~~~~--~~~~~~~-----~~~~l~~----~l~~~ 74 (273)
.|+||++||++++...|..++ +.|..++|+||++|+||||.|+.+.. ..+++++ +++|+.+ +++++
T Consensus 41 ~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 120 (339)
T PRK07581 41 DNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEKF 120 (339)
T ss_pred CCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHHh
Confidence 356777777777777776554 36765579999999999999986542 1345444 4667665 66789
Q ss_pred CCCCc-EEEEEechhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhh--------hhhh
Q 024065 75 PAEEK-VILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDT--------QFSQ 145 (273)
Q Consensus 75 ~~~~~-~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 145 (273)
+.++ ++||||||||++|+.+|.++|++|+++|++++....... ...........+... ..|... ....
T Consensus 121 -gi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~-~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~ 197 (339)
T PRK07581 121 -GIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPH-NFVFLEGLKAALTAD-PAFNGGWYAEPPERGLRA 197 (339)
T ss_pred -CCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHH-HHHHHHHHHHHHHhC-CCCCCCCCCCcHHHHHHH
Confidence 8899 579999999999999999999999999999875321110 000001111000000 000000 0000
Q ss_pred ccCCCCCcccccccchhhhhhhhcCCC----chhH-HHhhhh-ccCC-ccccc--------cc-cc----cCcCCccCcc
Q 024065 146 CDASNPSHISMLFGREFLTIKIYQLCP----PEDL-ELAKML-VRPG-SMFID--------NL-SK----ESKFSDEGYG 205 (273)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~-~~~~-~~~~~--------~~-~~----~~~~~~~~~~ 205 (273)
.. .......+.+.++......... .... ...... .... ..... .+ .. ......+..+
T Consensus 198 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I 274 (339)
T PRK07581 198 HA---RVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRNPAYGGDLAAALGSI 274 (339)
T ss_pred HH---HHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccCcccCCCHHHHHhcC
Confidence 00 0000000000111100000000 0000 000000 0000 00000 00 00 0111224557
Q ss_pred cceEEEEeecCCCCCCHHHHHHHHHhCCCceEEEEec-CCccccccChHhHHHHHHHHHhccc
Q 024065 206 SVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKG-GDHMAMLSDPQKLCDCLSQISLNRH 267 (273)
Q Consensus 206 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~~i~~fl~~~~ 267 (273)
++|||+|+|++|..+|++..+.+.+.+|+++++++++ +||++++++|+.+++.|.+||++..
T Consensus 275 ~~PtLvI~G~~D~~~p~~~~~~l~~~ip~a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~~ 337 (339)
T PRK07581 275 TAKTFVMPISTDLYFPPEDCEAEAALIPNAELRPIESIWGHLAGFGQNPADIAFIDAALKELL 337 (339)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEeCCCCCccccccCcHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998 9999999999999999999999864
No 33
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=1.4e-31 Score=211.54 Aligned_cols=252 Identities=14% Similarity=0.166 Sum_probs=149.2
Q ss_pred CCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcch----hhchHHHHHHHHhCCCCCcEEEE
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTF----HAYSEPLMEVLASLPAEEKVILV 83 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~----~~~~~~l~~~l~~~~~~~~~~lv 83 (273)
++|+|||+||++++...|...+..|.++ |+|+++|+||||.|+.+.....+. +.+++++.++++.+ +.++++++
T Consensus 104 ~~p~vvllHG~~~~~~~~~~~~~~L~~~-~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l-~~~~~~lv 181 (402)
T PLN02894 104 DAPTLVMVHGYGASQGFFFRNFDALASR-FRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAK-NLSNFILL 181 (402)
T ss_pred CCCEEEEECCCCcchhHHHHHHHHHHhC-CEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHc-CCCCeEEE
Confidence 4689999999999999999888999875 999999999999998654221121 23567788888888 88899999
Q ss_pred EechhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhc-----cC----CCCCcc
Q 024065 84 GHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQC-----DA----SNPSHI 154 (273)
Q Consensus 84 G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~----~~~~~~ 154 (273)
||||||.+++.+|.++|++|+++|++++.......... ....... ...|....+... .+ ....+.
T Consensus 182 GhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~--~~~~~~~----~~~~~~~~~~~~~~~~~~p~~~~~~~gp~ 255 (402)
T PLN02894 182 GHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDK--SEWLTKF----RATWKGAVLNHLWESNFTPQKIIRGLGPW 255 (402)
T ss_pred EECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchh--HHHHhhc----chhHHHHHHHHHhhcCCCHHHHHHhccch
Confidence 99999999999999999999999999876432221110 0000000 000100000000 00 000000
Q ss_pred cccccchhhhhhhhcC-----CCchh-HHHhhhh-----ccCCcc----c---cccccccCcCCccCcccceEEEEeecC
Q 024065 155 SMLFGREFLTIKIYQL-----CPPED-LELAKML-----VRPGSM----F---IDNLSKESKFSDEGYGSVKRVYLVCEE 216 (273)
Q Consensus 155 ~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~-----~~~~~~----~---~~~~~~~~~~~~~~~~~~Pvl~i~g~~ 216 (273)
...+...+....+... ..... ....... ...... + ...............+++|+++|+|++
T Consensus 256 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI~G~~ 335 (402)
T PLN02894 256 GPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFIYGRH 335 (402)
T ss_pred hHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEEEeCC
Confidence 0000000000000000 00000 0000000 000000 0 000111111222455699999999999
Q ss_pred CCCCCHHHHHHHHHhC-CCceEEEEecCCccccccChHhHHHHHHHHHhcccc
Q 024065 217 DIGLPKQFQHWMIQNY-PVNEVMEIKGGDHMAMLSDPQKLCDCLSQISLNRHD 268 (273)
Q Consensus 217 D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 268 (273)
|.+.+ .....+.+.. +.+++++++++||+++.|+|++|++.|.+|++....
T Consensus 336 D~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~~ 387 (402)
T PLN02894 336 DWMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYLS 387 (402)
T ss_pred CCCCc-HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhcc
Confidence 98776 4444455544 468999999999999999999999999999887643
No 34
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.98 E-value=2.8e-31 Score=210.28 Aligned_cols=237 Identities=18% Similarity=0.212 Sum_probs=153.9
Q ss_pred CCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEech
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSL 87 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~ 87 (273)
++++|||+||++++...|..+...|.+. |+|+++|+||||.|..... ..+++++++++.++++.+ +..+++++|||+
T Consensus 130 ~~~~vl~~HG~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~lvG~S~ 206 (371)
T PRK14875 130 DGTPVVLIHGFGGDLNNWLFNHAALAAG-RPVIALDLPGHGASSKAVG-AGSLDELAAAVLAFLDAL-GIERAHLVGHSM 206 (371)
T ss_pred CCCeEEEECCCCCccchHHHHHHHHhcC-CEEEEEcCCCCCCCCCCCC-CCCHHHHHHHHHHHHHhc-CCccEEEEeech
Confidence 4789999999999999999999999875 9999999999999965443 368999999999999999 888999999999
Q ss_pred hHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCCcccccccchhhhhhh
Q 024065 88 GGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKI 167 (273)
Q Consensus 88 Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (273)
||.+++.+|.++|+++.++|++++......... .....+.... ....+......... . ...+...+.....
T Consensus 207 Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~ 277 (371)
T PRK14875 207 GGAVALRLAARAPQRVASLTLIAPAGLGPEING-DYIDGFVAAE--SRRELKPVLELLFA--D----PALVTRQMVEDLL 277 (371)
T ss_pred HHHHHHHHHHhCchheeEEEEECcCCcCcccch-hHHHHhhccc--chhHHHHHHHHHhc--C----hhhCCHHHHHHHH
Confidence 999999999999999999999987532211110 0111110000 00000000000000 0 0001111111111
Q ss_pred hcCCCc---hhH-HHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCCCceEEEEecC
Q 024065 168 YQLCPP---EDL-ELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGG 243 (273)
Q Consensus 168 ~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (273)
...... ... .......... ............+++|+|+++|++|.++|++..+.+ .+++++.+++++
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l---~~~~~~~~~~~~ 348 (371)
T PRK14875 278 KYKRLDGVDDALRALADALFAGG------RQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGL---PDGVAVHVLPGA 348 (371)
T ss_pred HHhccccHHHHHHHHHHHhccCc------ccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhc---cCCCeEEEeCCC
Confidence 100000 000 0000000000 000001112334589999999999999998776544 346899999999
Q ss_pred CccccccChHhHHHHHHHHHhc
Q 024065 244 DHMAMLSDPQKLCDCLSQISLN 265 (273)
Q Consensus 244 gH~~~~~~~~~~~~~i~~fl~~ 265 (273)
||++++++|+++++.|.+||++
T Consensus 349 gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 349 GHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred CCChhhhCHHHHHHHHHHHhcc
Confidence 9999999999999999999975
No 35
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.98 E-value=3.6e-32 Score=212.69 Aligned_cols=248 Identities=13% Similarity=0.101 Sum_probs=151.6
Q ss_pred CCceEEEEccCCCchh-----------hHHHHHH---HHhhCCcEEEEeccCC--CCCCCCC----c-------CCCcch
Q 024065 8 EEKHFVLVHGVNHGAW-----------CWYKLKA---RLVAGGHRVTAVDLAA--SGINMKR----I-------EDVHTF 60 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~-----------~~~~~~~---~l~~~g~~vi~~d~~G--~G~s~~~----~-------~~~~~~ 60 (273)
++++|||+||++++.. .|+.++. .|..++|+|+++|+|| ||.|... . ...+++
T Consensus 30 ~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~ 109 (351)
T TIGR01392 30 RSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITI 109 (351)
T ss_pred CCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcH
Confidence 3679999999999774 3777762 5545679999999999 5665431 1 113789
Q ss_pred hhchHHHHHHHHhCCCCCc-EEEEEechhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccch
Q 024065 61 HAYSEPLMEVLASLPAEEK-VILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWL 139 (273)
Q Consensus 61 ~~~~~~l~~~l~~~~~~~~-~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (273)
+++++++.++++++ +.++ ++++||||||++++.+|.++|++|+++|++++.......... .......... ....+.
T Consensus 110 ~~~~~~~~~~~~~l-~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~ 186 (351)
T TIGR01392 110 RDDVKAQKLLLDHL-GIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIA-FNEVQRQAIL-ADPNWN 186 (351)
T ss_pred HHHHHHHHHHHHHc-CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHH-HHHHHHHHHH-hCCCCC
Confidence 99999999999999 8888 999999999999999999999999999999976432211100 0000000000 000000
Q ss_pred hh-------------hhhhccCCCCCcccccccchhhhhhhhcCCCch-----------h-HHHh----hhhcc---CCc
Q 024065 140 DT-------------QFSQCDASNPSHISMLFGREFLTIKIYQLCPPE-----------D-LELA----KMLVR---PGS 187 (273)
Q Consensus 140 ~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~-~~~~----~~~~~---~~~ 187 (273)
.. ...... . ........+...+....... . .... ..+.. ...
T Consensus 187 ~g~~~~~~~p~~~~~~~~~~~--~----~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 260 (351)
T TIGR01392 187 DGDYYEDGQPDRGLALARMLA--H----LTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQGDKFVDRFDANS 260 (351)
T ss_pred CCCCCCCCChhhHHHHHHHHH--H----HhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHHHHHHhhcCcch
Confidence 00 000000 0 00000111111111000000 0 0000 00000 000
Q ss_pred --ccccccccc-------CcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCCCceEE-----EEecCCccccccChH
Q 024065 188 --MFIDNLSKE-------SKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVM-----EIKGGDHMAMLSDPQ 253 (273)
Q Consensus 188 --~~~~~~~~~-------~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~-----~~~~~gH~~~~~~~~ 253 (273)
.....+... ........+++|+|+|+|++|.++|++..+.+.+.+|+++++ +++++||++++++|+
T Consensus 261 ~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~~GH~~~le~p~ 340 (351)
T TIGR01392 261 YLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIESPYGHDAFLVETD 340 (351)
T ss_pred HHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeCCCCCcchhhcCHH
Confidence 000001110 012235566999999999999999999999999999988765 557899999999999
Q ss_pred hHHHHHHHHHh
Q 024065 254 KLCDCLSQISL 264 (273)
Q Consensus 254 ~~~~~i~~fl~ 264 (273)
++++.|.+||+
T Consensus 341 ~~~~~l~~FL~ 351 (351)
T TIGR01392 341 QVEELIRGFLR 351 (351)
T ss_pred HHHHHHHHHhC
Confidence 99999999984
No 36
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.98 E-value=8.1e-31 Score=205.47 Aligned_cols=244 Identities=16% Similarity=0.137 Sum_probs=155.4
Q ss_pred CCCCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCC---CCCcEEE
Q 024065 6 GMEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP---AEEKVIL 82 (273)
Q Consensus 6 g~~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~l 82 (273)
++.+++|||+||++++...|..+++.|.++||+|+++|+||||.|+.......+++.+++|+.++++.+. ...++++
T Consensus 133 ~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~l 212 (395)
T PLN02652 133 GEMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSENPGVPCFL 212 (395)
T ss_pred CCCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCCCEEE
Confidence 3446789999999999999999999999999999999999999998765544588888999999988871 2347999
Q ss_pred EEechhHHHHHHHHHHCCC---ccceeEEeeccCCCCCCCcc-hhHhhhhhhccCCCccchhhhhhhccCCCCCcccccc
Q 024065 83 VGHSLGGVTLALAADKFPH---KISVAVFVTAFMPDTTHRPS-FVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLF 158 (273)
Q Consensus 83 vG~S~Gg~~a~~~a~~~p~---~v~~lil~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (273)
+||||||.+++.++ .+|+ +++++|+.+|.......... .....+.... ...+. +... .........
T Consensus 213 vGhSmGG~ial~~a-~~p~~~~~v~glVL~sP~l~~~~~~~~~~~~~~l~~~~---~p~~~---~~~~---~~~~~~~s~ 282 (395)
T PLN02652 213 FGHSTGGAVVLKAA-SYPSIEDKLEGIVLTSPALRVKPAHPIVGAVAPIFSLV---APRFQ---FKGA---NKRGIPVSR 282 (395)
T ss_pred EEECHHHHHHHHHH-hccCcccccceEEEECcccccccchHHHHHHHHHHHHh---CCCCc---ccCc---ccccCCcCC
Confidence 99999999999877 4664 89999999876432111100 0011111110 00000 0000 000000000
Q ss_pred cchhhhhhhhcCCC-c--hhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCC--
Q 024065 159 GREFLTIKIYQLCP-P--EDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYP-- 233 (273)
Q Consensus 159 ~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~-- 233 (273)
.+............ . ........... .. .........+++|+|+++|++|.++|++.++.+.+.++
T Consensus 283 ~~~~~~~~~~dp~~~~g~i~~~~~~~~~~--------~~-~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~ 353 (395)
T PLN02652 283 DPAALLAKYSDPLVYTGPIRVRTGHEILR--------IS-SYLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASR 353 (395)
T ss_pred CHHHHHHHhcCCCcccCCchHHHHHHHHH--------HH-HHHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCC
Confidence 00000000000000 0 00000000000 00 00011234568999999999999999999999988765
Q ss_pred CceEEEEecCCcccccc-ChHhHHHHHHHHHhcccc
Q 024065 234 VNEVMEIKGGDHMAMLS-DPQKLCDCLSQISLNRHD 268 (273)
Q Consensus 234 ~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~~~~ 268 (273)
+.+++++++++|.++.| +++++.+.|.+||+....
T Consensus 354 ~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 354 HKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred CceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHhh
Confidence 46899999999999887 789999999999987654
No 37
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.98 E-value=1.9e-31 Score=210.08 Aligned_cols=255 Identities=12% Similarity=0.083 Sum_probs=152.0
Q ss_pred CceEEEEccCCCchhh-------------HHHHHH---HHhhCCcEEEEeccCCC-CCCCCCcC-------------CCc
Q 024065 9 EKHFVLVHGVNHGAWC-------------WYKLKA---RLVAGGHRVTAVDLAAS-GINMKRIE-------------DVH 58 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~-------------~~~~~~---~l~~~g~~vi~~d~~G~-G~s~~~~~-------------~~~ 58 (273)
+|+|||+||++++... |..++. .|...+|+|+++|++|+ |.|+.+.. ..+
T Consensus 48 ~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~ 127 (379)
T PRK00175 48 SNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVI 127 (379)
T ss_pred CCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcC
Confidence 6899999999999985 666652 34234699999999983 44432210 147
Q ss_pred chhhchHHHHHHHHhCCCCCc-EEEEEechhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCcc
Q 024065 59 TFHAYSEPLMEVLASLPAEEK-VILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDS 137 (273)
Q Consensus 59 ~~~~~~~~l~~~l~~~~~~~~-~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (273)
+++++++++.++++++ +.++ ++++||||||.+++.+|.++|++|+++|++++.......... .......... ....
T Consensus 128 ~~~~~~~~~~~~l~~l-~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~~~~i~-~~~~ 204 (379)
T PRK00175 128 TIRDWVRAQARLLDAL-GITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQNIA-FNEVARQAIL-ADPD 204 (379)
T ss_pred CHHHHHHHHHHHHHHh-CCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHHHH-HHHHHHHHHH-hCCC
Confidence 9999999999999999 8888 589999999999999999999999999999976432211000 0000000000 0000
Q ss_pred chh-------------h----------------hhhhccCCCCCccc-ccccchh-hhhh-------hhcCCCchhHHHh
Q 024065 138 WLD-------------T----------------QFSQCDASNPSHIS-MLFGREF-LTIK-------IYQLCPPEDLELA 179 (273)
Q Consensus 138 ~~~-------------~----------------~~~~~~~~~~~~~~-~~~~~~~-~~~~-------~~~~~~~~~~~~~ 179 (273)
|.. . ....+......... ..+.... .... .............
T Consensus 205 ~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~ 284 (379)
T PRK00175 205 WHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQGDKFVERFDANSYLYL 284 (379)
T ss_pred CCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHHHHHHhhccCchHHHHH
Confidence 000 0 00000000000000 0000000 0000 0000000000000
Q ss_pred hhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCCCc----eEEEEe-cCCccccccChHh
Q 024065 180 KMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVN----EVMEIK-GGDHMAMLSDPQK 254 (273)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~----~~~~~~-~~gH~~~~~~~~~ 254 (273)
......... ..............+++|+|+|+|++|.++|++..+.+.+.++++ ++++++ ++||++++|+|++
T Consensus 285 ~~~~~~~d~--~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~le~p~~ 362 (379)
T PRK00175 285 TRALDYFDP--ARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDSPYGHDAFLLDDPR 362 (379)
T ss_pred HHHHHhccc--cCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHhcCHHH
Confidence 000000000 000000011234567999999999999999999999999999887 778785 8999999999999
Q ss_pred HHHHHHHHHhcccc
Q 024065 255 LCDCLSQISLNRHD 268 (273)
Q Consensus 255 ~~~~i~~fl~~~~~ 268 (273)
+++.|.+||++...
T Consensus 363 ~~~~L~~FL~~~~~ 376 (379)
T PRK00175 363 YGRLVRAFLERAAR 376 (379)
T ss_pred HHHHHHHHHHhhhh
Confidence 99999999987653
No 38
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.97 E-value=2e-30 Score=186.99 Aligned_cols=244 Identities=16% Similarity=0.125 Sum_probs=165.9
Q ss_pred CCCceEEEEccCCCch-hhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhC-----CCCCcE
Q 024065 7 MEEKHFVLVHGVNHGA-WCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL-----PAEEKV 80 (273)
Q Consensus 7 ~~~~~vv~lhG~~~~~-~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~-----~~~~~~ 80 (273)
..+-.|+++||++... ..|..++..|+..||.|+++|++|||.|+.......+++..++|+....+.. ....+.
T Consensus 52 ~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~ 131 (313)
T KOG1455|consen 52 EPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPR 131 (313)
T ss_pred CCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCe
Confidence 3456799999998776 7788999999999999999999999999988777789999999999998864 355689
Q ss_pred EEEEechhHHHHHHHHHHCCCccceeEEeeccCCCCCCC-cchhHhhhhhhccCCCccchhhhhhhccCCCCCccccccc
Q 024065 81 ILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHR-PSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFG 159 (273)
Q Consensus 81 ~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (273)
+++||||||.+++.++.+.|+..+++|+++|........ +......+...+..-.+.|.... .+......+.
T Consensus 132 FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l~~liP~wk~vp-------~~d~~~~~~k 204 (313)
T KOG1455|consen 132 FLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISILTLLSKLIPTWKIVP-------TKDIIDVAFK 204 (313)
T ss_pred eeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHHHHHHHHhCCceeecC-------CccccccccC
Confidence 999999999999999999999999999999976544333 22222222222211122332110 0000011111
Q ss_pred chhhhhhhhcC----CCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCC--
Q 024065 160 REFLTIKIYQL----CPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYP-- 233 (273)
Q Consensus 160 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~-- 233 (273)
+...+...... ...........+++....... .+..+++|.+++||+.|.++.++..+.+.+..+
T Consensus 205 dp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~---------~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~ 275 (313)
T KOG1455|consen 205 DPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEK---------NLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSS 275 (313)
T ss_pred CHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHH---------hcccccccEEEEecCCCcccCcHHHHHHHHhccCC
Confidence 11111111111 011112222222222211111 133459999999999999999999999999875
Q ss_pred CceEEEEecCCccccc-c---ChHhHHHHHHHHHhcc
Q 024065 234 VNEVMEIKGGDHMAML-S---DPQKLCDCLSQISLNR 266 (273)
Q Consensus 234 ~~~~~~~~~~gH~~~~-~---~~~~~~~~i~~fl~~~ 266 (273)
+.++.+|||.-|.++. | +-+.+...|.+||++.
T Consensus 276 DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 276 DKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred CCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 5699999999999886 3 2366788889999864
No 39
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.97 E-value=1.1e-29 Score=192.02 Aligned_cols=243 Identities=18% Similarity=0.208 Sum_probs=158.4
Q ss_pred ceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCC-CCcCCCcchhhchHHHHHHHHhCC---CCCcEEEEEe
Q 024065 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINM-KRIEDVHTFHAYSEPLMEVLASLP---AEEKVILVGH 85 (273)
Q Consensus 10 ~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~-~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~lvG~ 85 (273)
.+||++||++.+..-|..++..|..+||.|+++|+||||.|. .......++.++.+|+.++++... ...+++++||
T Consensus 35 g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gH 114 (298)
T COG2267 35 GVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGH 114 (298)
T ss_pred cEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHHHHHHHHHHHHHhccCCCCCeEEEEe
Confidence 689999999999999999999999999999999999999998 455455579999999999998882 4579999999
Q ss_pred chhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCC----Ccccccccch
Q 024065 86 SLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNP----SHISMLFGRE 161 (273)
Q Consensus 86 S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 161 (273)
||||.|++.++.+++.+|+++|+.+|.................... ...+.. .+.. .. ..........
T Consensus 115 SmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~---~~~~~p----~~~~-~~~~~~~~~~~~~sr~ 186 (298)
T COG2267 115 SMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLALKL---LGRIRP----KLPV-DSNLLEGVLTDDLSRD 186 (298)
T ss_pred CcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHhccc---cccccc----cccc-CcccccCcCcchhhcC
Confidence 9999999999999999999999999876544200000111110000 000000 0000 00 0000001100
Q ss_pred hhhhhhhcCCCc-----hhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCC-HHHHHHHHHhC--C
Q 024065 162 FLTIKIYQLCPP-----EDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLP-KQFQHWMIQNY--P 233 (273)
Q Consensus 162 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~-~~~~~~~~~~~--~ 233 (273)
......+...+. ....+........ . .........+++|+|+++|++|.+++ .+...++.+.. +
T Consensus 187 ~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~-------~-~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~ 258 (298)
T COG2267 187 PAEVAAYEADPLIGVGGPVSRWVDLALLAG-------R-VPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSP 258 (298)
T ss_pred HHHHHHHhcCCccccCCccHHHHHHHHHhh-------c-ccchhccccccCCEEEEecCCCccccCcHHHHHHHHhcCCC
Confidence 000001111100 0001111111000 0 11222244559999999999999999 67766666554 5
Q ss_pred CceEEEEecCCccccccCh---HhHHHHHHHHHhcccc
Q 024065 234 VNEVMEIKGGDHMAMLSDP---QKLCDCLSQISLNRHD 268 (273)
Q Consensus 234 ~~~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~~~~~ 268 (273)
++++++++|+.|.++.|.. +++.+.+.+|+.+...
T Consensus 259 ~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 259 DKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred CceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhcc
Confidence 7789999999999998843 7888999999987654
No 40
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.97 E-value=2.4e-30 Score=232.76 Aligned_cols=247 Identities=18% Similarity=0.195 Sum_probs=156.1
Q ss_pred CCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCc-------CCCcchhhchHHHHHHHHhCCCCCcE
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRI-------EDVHTFHAYSEPLMEVLASLPAEEKV 80 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~-------~~~~~~~~~~~~l~~~l~~~~~~~~~ 80 (273)
++++|||+||++++...|..++..|.+. |+|+++|+||||.|+... ...++++++++++.++++++ +.+++
T Consensus 1370 ~~~~vVllHG~~~s~~~w~~~~~~L~~~-~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l-~~~~v 1447 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGEDWIPIMKAISGS-ARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHI-TPGKV 1447 (1655)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhCC-CEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHh-CCCCE
Confidence 4689999999999999999999999875 999999999999997543 12468999999999999999 88999
Q ss_pred EEEEechhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccch-----hhhhhhccCCCCCccc
Q 024065 81 ILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWL-----DTQFSQCDASNPSHIS 155 (273)
Q Consensus 81 ~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 155 (273)
+++||||||.+++.++.++|++|+++|++++...... .. ................ ........ ......
T Consensus 1448 ~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~-~~---~~~~~~~~~~~~~~~l~~~g~~~~~~~~~--~~~~~~ 1521 (1655)
T PLN02980 1448 TLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKD-EV---ARKIRSAKDDSRARMLIDHGLEIFLENWY--SGELWK 1521 (1655)
T ss_pred EEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCc-hH---HHHHHhhhhhHHHHHHHhhhHHHHHHHhc--cHHHhh
Confidence 9999999999999999999999999999986422111 00 0000000000000000 00000000 000000
Q ss_pred ccccchhhhhhhhc-CCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCCC
Q 024065 156 MLFGREFLTIKIYQ-LCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPV 234 (273)
Q Consensus 156 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~ 234 (273)
.......+...... ........... ..... ...........+..+++|+|+|+|++|..++ +..+++.+.+++
T Consensus 1522 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~----~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~ 1595 (1655)
T PLN02980 1522 SLRNHPHFNKIVASRLLHKDVPSLAK-LLSDL----SIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGK 1595 (1655)
T ss_pred hhccCHHHHHHHHHHHhcCCHHHHHH-HHHHh----hhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHccc
Confidence 00000000000000 00000000000 00000 0000111112355669999999999999875 566677777765
Q ss_pred ------------ceEEEEecCCccccccChHhHHHHHHHHHhcccc
Q 024065 235 ------------NEVMEIKGGDHMAMLSDPQKLCDCLSQISLNRHD 268 (273)
Q Consensus 235 ------------~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 268 (273)
+++++++++||++++|+|+++++.|.+||++...
T Consensus 1596 a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~~~ 1641 (1655)
T PLN02980 1596 SKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRLHN 1641 (1655)
T ss_pred cccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHhccc
Confidence 4899999999999999999999999999998653
No 41
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.97 E-value=7.4e-30 Score=175.22 Aligned_cols=222 Identities=16% Similarity=0.136 Sum_probs=154.9
Q ss_pred CceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhC--CCCCcEEEEEec
Q 024065 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL--PAEEKVILVGHS 86 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~lvG~S 86 (273)
+..|+|+|||.++....+.+.+.|.++||.|.+|.+||||......-. .++++|.+++.+..+.+ .+.+.+.++|-|
T Consensus 15 ~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~-t~~~DW~~~v~d~Y~~L~~~gy~eI~v~GlS 93 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLK-TTPRDWWEDVEDGYRDLKEAGYDEIAVVGLS 93 (243)
T ss_pred CEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHHHhc-CCHHHHHHHHHHHHHHHHHcCCCeEEEEeec
Confidence 589999999999999999999999999999999999999988654433 57888877777666555 378899999999
Q ss_pred hhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCCcccccccchhhhhh
Q 024065 87 LGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIK 166 (273)
Q Consensus 87 ~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (273)
|||.+++.+|.++| ++++|.++++....... .....+... ...... ....+.+.+.+.
T Consensus 94 mGGv~alkla~~~p--~K~iv~m~a~~~~k~~~--~iie~~l~y--------~~~~kk----------~e~k~~e~~~~e 151 (243)
T COG1647 94 MGGVFALKLAYHYP--PKKIVPMCAPVNVKSWR--IIIEGLLEY--------FRNAKK----------YEGKDQEQIDKE 151 (243)
T ss_pred chhHHHHHHHhhCC--ccceeeecCCcccccch--hhhHHHHHH--------HHHhhh----------ccCCCHHHHHHH
Confidence 99999999999998 89999999865422211 111211110 000000 111122222222
Q ss_pred hhcCC--CchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCC--CceEEEEec
Q 024065 167 IYQLC--PPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYP--VNEVMEIKG 242 (273)
Q Consensus 167 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~ 242 (273)
+.... +.........+... .......|..|+++++|++|+.+|.+.+..+.+... ..++.++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~i~~------------~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~ 219 (243)
T COG1647 152 MKSYKDTPMTTTAQLKKLIKD------------ARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEG 219 (243)
T ss_pred HHHhhcchHHHHHHHHHHHHH------------HHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEcc
Confidence 22211 11111111111110 111234458899999999999999999999988763 458999999
Q ss_pred CCccccccC-hHhHHHHHHHHHhc
Q 024065 243 GDHMAMLSD-PQKLCDCLSQISLN 265 (273)
Q Consensus 243 ~gH~~~~~~-~~~~~~~i~~fl~~ 265 (273)
+||.+..+. .+.+.+.+..||+.
T Consensus 220 SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 220 SGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred CCceeecchhHHHHHHHHHHHhhC
Confidence 999998875 48899999999973
No 42
>PLN02511 hydrolase
Probab=99.97 E-value=1.6e-30 Score=204.78 Aligned_cols=249 Identities=13% Similarity=0.077 Sum_probs=149.2
Q ss_pred CCCceEEEEccCCCchhh-H-HHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCC---CCCcEE
Q 024065 7 MEEKHFVLVHGVNHGAWC-W-YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP---AEEKVI 81 (273)
Q Consensus 7 ~~~~~vv~lhG~~~~~~~-~-~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~ 81 (273)
.++|+||++||+++++.. | ..++..+.++||+|+++|+||||.|+..... .....+++|+.++++++. +..+++
T Consensus 98 ~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~-~~~~~~~~Dl~~~i~~l~~~~~~~~~~ 176 (388)
T PLN02511 98 ADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQ-FYSASFTGDLRQVVDHVAGRYPSANLY 176 (388)
T ss_pred CCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcC-EEcCCchHHHHHHHHHHHHHCCCCCEE
Confidence 357899999999776643 4 5677777788999999999999999764333 334677888888888871 236899
Q ss_pred EEEechhHHHHHHHHHHCCCc--cceeEEeeccCCCCCCCcchhHh----hhhhhccCCCccchhhhhhhccCCCCCccc
Q 024065 82 LVGHSLGGVTLALAADKFPHK--ISVAVFVTAFMPDTTHRPSFVLE----QYSEKMGKEDDSWLDTQFSQCDASNPSHIS 155 (273)
Q Consensus 82 lvG~S~Gg~~a~~~a~~~p~~--v~~lil~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (273)
++||||||.+++.++.++|++ |.++++++++...... ...... .+...+..............+. .. .
T Consensus 177 lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~-~~~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~--~~---~ 250 (388)
T PLN02511 177 AAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIA-DEDFHKGFNNVYDKALAKALRKIFAKHALLFE--GL---G 250 (388)
T ss_pred EEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHH-HHHHhccHHHHHHHHHHHHHHHHHHHHHHHHh--hC---C
Confidence 999999999999999999987 8888888764321000 000000 0000000000000000000000 00 0
Q ss_pred ccccchhhhhhhhcCCCchhHHHhhhhccCCccc---cccccccCcCCccCcccceEEEEeecCCCCCCHHHH-HHHHHh
Q 024065 156 MLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMF---IDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQ-HWMIQN 231 (273)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~-~~~~~~ 231 (273)
..+... ...... ........+......+ ...+........+..+++|+|+|+|++|+++|.+.. ..+.+.
T Consensus 251 ~~~~~~----~~~~~~--~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~ 324 (388)
T PLN02511 251 GEYNIP----LVANAK--TVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKA 324 (388)
T ss_pred CccCHH----HHHhCC--CHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhc
Confidence 000000 000000 0000100010000000 000112223334566799999999999999998764 456777
Q ss_pred CCCceEEEEecCCccccccChHh------HHHHHHHHHhcccc
Q 024065 232 YPVNEVMEIKGGDHMAMLSDPQK------LCDCLSQISLNRHD 268 (273)
Q Consensus 232 ~~~~~~~~~~~~gH~~~~~~~~~------~~~~i~~fl~~~~~ 268 (273)
.|++++++++++||+.++|+|+. +.+.+.+||+....
T Consensus 325 ~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~~ 367 (388)
T PLN02511 325 NPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALEE 367 (388)
T ss_pred CCCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHHH
Confidence 89999999999999999999875 58999999986643
No 43
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.97 E-value=1.2e-29 Score=194.96 Aligned_cols=105 Identities=15% Similarity=0.136 Sum_probs=87.8
Q ss_pred CCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcC-CCcchhhchHHHHHHHHhCCCCCcEEEEEec
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIE-DVHTFHAYSEPLMEVLASLPAEEKVILVGHS 86 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S 86 (273)
++++|||+||++++...+ .+...+..++|+|+++|+||||.|+.+.. ..++.+++++|+..+++++ +.++++++|||
T Consensus 26 ~~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l-~~~~~~lvG~S 103 (306)
T TIGR01249 26 DGKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKLREKL-GIKNWLVFGGS 103 (306)
T ss_pred CCCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHc-CCCCEEEEEEC
Confidence 467899999988776544 33444544579999999999999986543 2357889999999999999 88899999999
Q ss_pred hhHHHHHHHHHHCCCccceeEEeeccCC
Q 024065 87 LGGVTLALAADKFPHKISVAVFVTAFMP 114 (273)
Q Consensus 87 ~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 114 (273)
|||.+++.++.++|++|+++|++++...
T Consensus 104 ~GG~ia~~~a~~~p~~v~~lvl~~~~~~ 131 (306)
T TIGR01249 104 WGSTLALAYAQTHPEVVTGLVLRGIFLL 131 (306)
T ss_pred HHHHHHHHHHHHChHhhhhheeeccccC
Confidence 9999999999999999999999987643
No 44
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.97 E-value=1.7e-29 Score=185.14 Aligned_cols=249 Identities=18% Similarity=0.181 Sum_probs=163.3
Q ss_pred CCCceEEEEccCCCchhhHHHHHHHHhhC-CcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCC---CCCcEEE
Q 024065 7 MEEKHFVLVHGVNHGAWCWYKLKARLVAG-GHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP---AEEKVIL 82 (273)
Q Consensus 7 ~~~~~vv~lhG~~~~~~~~~~~~~~l~~~-g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~l 82 (273)
...|+++++||+.++...|+.+...|++. +..|+++|.|.||.|+.... .+.+.+++|+..+++... ...++++
T Consensus 50 ~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~--h~~~~ma~dv~~Fi~~v~~~~~~~~~~l 127 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITV--HNYEAMAEDVKLFIDGVGGSTRLDPVVL 127 (315)
T ss_pred CCCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCccccc--cCHHHHHHHHHHHHHHcccccccCCcee
Confidence 35899999999999999999999999875 67899999999999987765 479999999999999982 3679999
Q ss_pred EEechhH-HHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCcc-----chhhhhhhccCCCCCcccc
Q 024065 83 VGHSLGG-VTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDS-----WLDTQFSQCDASNPSHISM 156 (273)
Q Consensus 83 vG~S~Gg-~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 156 (273)
+|||||| .+++..+..+|+.+.++|+++.+......+... ...+...+...... -......... . ....
T Consensus 128 ~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e-~~e~i~~m~~~d~~~~~~~~rke~~~~l~--~--~~~d 202 (315)
T KOG2382|consen 128 LGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGE-YRELIKAMIQLDLSIGVSRGRKEALKSLI--E--VGFD 202 (315)
T ss_pred cccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccch-HHHHHHHHHhccccccccccHHHHHHHHH--H--Hhcc
Confidence 9999999 788888889999999999999653222222222 22222222000000 0000000000 0 0000
Q ss_pred cccchhhhhhhhcCCCchh------HHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHH
Q 024065 157 LFGREFLTIKIYQLCPPED------LELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQ 230 (273)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~ 230 (273)
.....++...+........ ......++.... .......... ..-..|||++.|.++..++.+....+.+
T Consensus 203 ~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~----~~s~~~~l~~-~~~~~pvlfi~g~~S~fv~~~~~~~~~~ 277 (315)
T KOG2382|consen 203 NLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYE----ILSYWADLED-GPYTGPVLFIKGLQSKFVPDEHYPRMEK 277 (315)
T ss_pred hHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHH----hhcccccccc-cccccceeEEecCCCCCcChhHHHHHHH
Confidence 0001111111110000000 000000000000 0011111111 2228899999999999999999999999
Q ss_pred hCCCceEEEEecCCccccccChHhHHHHHHHHHhccc
Q 024065 231 NYPVNEVMEIKGGDHMAMLSDPQKLCDCLSQISLNRH 267 (273)
Q Consensus 231 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 267 (273)
.+|+++++.++++||+.++|+|+++.+.|.+|+.+..
T Consensus 278 ~fp~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~~ 314 (315)
T KOG2382|consen 278 IFPNVEVHELDEAGHWVHLEKPEEFIESISEFLEEPE 314 (315)
T ss_pred hccchheeecccCCceeecCCHHHHHHHHHHHhcccC
Confidence 9999999999999999999999999999999998754
No 45
>PRK05855 short chain dehydrogenase; Validated
Probab=99.96 E-value=4.7e-29 Score=208.80 Aligned_cols=253 Identities=17% Similarity=0.149 Sum_probs=148.1
Q ss_pred CCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcC-CCcchhhchHHHHHHHHhCCCCC-cEEEEEe
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIE-DVHTFHAYSEPLMEVLASLPAEE-KVILVGH 85 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~-~~~~~~~~~~~l~~~l~~~~~~~-~~~lvG~ 85 (273)
++|+|||+||++++...|..+.+.|. .||+|+++|+||||.|+.+.. ..++++++++|+.++++++ +.. +++|+||
T Consensus 24 ~~~~ivllHG~~~~~~~w~~~~~~L~-~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~~l-~~~~~~~lvGh 101 (582)
T PRK05855 24 DRPTVVLVHGYPDNHEVWDGVAPLLA-DRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDAV-SPDRPVHLLAH 101 (582)
T ss_pred CCCeEEEEcCCCchHHHHHHHHHHhh-cceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHHHh-CCCCcEEEEec
Confidence 47899999999999999999999995 579999999999999986543 4579999999999999999 554 5999999
Q ss_pred chhHHHHHHHHHH--CCCccceeEEeeccCCCCCCCcchhHhhh--------hhhccCCCccchhhhhhhccCCCCCccc
Q 024065 86 SLGGVTLALAADK--FPHKISVAVFVTAFMPDTTHRPSFVLEQY--------SEKMGKEDDSWLDTQFSQCDASNPSHIS 155 (273)
Q Consensus 86 S~Gg~~a~~~a~~--~p~~v~~lil~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (273)
||||.+++.++.+ .++++..++.++++.... ......... ..........+......... ......
T Consensus 102 S~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 177 (582)
T PRK05855 102 DWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDH--VGFWLRSGLRRPTPRRLARALGQLLRSWYIYLFHLPV--LPELLW 177 (582)
T ss_pred ChHHHHHHHHHhCccchhhhhhheeccCCchHH--HHHHHhhcccccchhhhhHHHHHHhhhHHHHHHhCCC--CcHHHh
Confidence 9999999888765 234555555444321100 000000000 00000000000000000000 000000
Q ss_pred ccccchhhhhhhhc--CCCchhHHHhh---hhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHH
Q 024065 156 MLFGREFLTIKIYQ--LCPPEDLELAK---MLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQ 230 (273)
Q Consensus 156 ~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~ 230 (273)
.............. ........... ........+...............+++|+|+|+|++|.++|++..+.+.+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~ 257 (582)
T PRK05855 178 RLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRERYTDVPVQLIVPTGDPYVRPALYDDLSR 257 (582)
T ss_pred ccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCccCCccCceEEEEeCCCcccCHHHhccccc
Confidence 00000000000000 00000000000 00000000000000001111133469999999999999999999999988
Q ss_pred hCCCceEEEEecCCccccccChHhHHHHHHHHHhccc
Q 024065 231 NYPVNEVMEIKGGDHMAMLSDPQKLCDCLSQISLNRH 267 (273)
Q Consensus 231 ~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 267 (273)
.+++.++++++ +||++++|+|+++.+.|.+|+++..
T Consensus 258 ~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 258 WVPRLWRREIK-AGHWLPMSHPQVLAAAVAEFVDAVE 293 (582)
T ss_pred cCCcceEEEcc-CCCcchhhChhHHHHHHHHHHHhcc
Confidence 88888888887 8999999999999999999998754
No 46
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.95 E-value=2.4e-27 Score=183.26 Aligned_cols=237 Identities=12% Similarity=0.153 Sum_probs=145.1
Q ss_pred CCceEEEEccCCCchh-hH-------------------------HHHHHHHhhCCcEEEEeccCCCCCCCCCc---CCCc
Q 024065 8 EEKHFVLVHGVNHGAW-CW-------------------------YKLKARLVAGGHRVTAVDLAASGINMKRI---EDVH 58 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~-~~-------------------------~~~~~~l~~~g~~vi~~d~~G~G~s~~~~---~~~~ 58 (273)
.+.+|+++||++.+.. .| ..+++.|.++||+|+++|+||||.|+... ....
T Consensus 20 ~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~rGHG~S~~~~~~~g~~~ 99 (332)
T TIGR01607 20 AIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQGHGESDGLQNLRGHIN 99 (332)
T ss_pred CeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecccccCCCccccccccchh
Confidence 4678999999998885 21 46789999999999999999999998542 2224
Q ss_pred chhhchHHHHHHHHhCC----------------------C-CCcEEEEEechhHHHHHHHHHHCCC--------ccceeE
Q 024065 59 TFHAYSEPLMEVLASLP----------------------A-EEKVILVGHSLGGVTLALAADKFPH--------KISVAV 107 (273)
Q Consensus 59 ~~~~~~~~l~~~l~~~~----------------------~-~~~~~lvG~S~Gg~~a~~~a~~~p~--------~v~~li 107 (273)
+++++++|+.++++.+. . ..|++++||||||.+++.++..+++ .++++|
T Consensus 100 ~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i 179 (332)
T TIGR01607 100 CFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCI 179 (332)
T ss_pred hHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhccccccccccccceEE
Confidence 88999999999987641 1 4589999999999999999876643 588999
Q ss_pred EeeccCCCCCC--C----cchhHhhhhhhccCCCccchhhhhhhccCCCCCcccccccc-hhhhhhhhcCC----CchhH
Q 024065 108 FVTAFMPDTTH--R----PSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGR-EFLTIKIYQLC----PPEDL 176 (273)
Q Consensus 108 l~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~ 176 (273)
+++|....... . .......+...+ ......... .. ...+.. ....+...... .....
T Consensus 180 ~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~--------~~~~p~~~~-~~---~~~~~~~~~~~~~~~~Dp~~~~~~~s~ 247 (332)
T TIGR01607 180 SLSGMISIKSVGSDDSFKFKYFYLPVMNFM--------SRVFPTFRI-SK---KIRYEKSPYVNDIIKFDKFRYDGGITF 247 (332)
T ss_pred EeccceEEecccCCCcchhhhhHHHHHHHH--------HHHCCcccc-cC---ccccccChhhhhHHhcCccccCCcccH
Confidence 88876421110 0 000001111100 000000000 00 000000 00000000000 00001
Q ss_pred HHhhhhccCCccccccccccCcCCccCcc--cceEEEEeecCCCCCCHHHHHHHHHhC--CCceEEEEecCCccccccC-
Q 024065 177 ELAKMLVRPGSMFIDNLSKESKFSDEGYG--SVKRVYLVCEEDIGLPKQFQHWMIQNY--PVNEVMEIKGGDHMAMLSD- 251 (273)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Pvl~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~- 251 (273)
.+...+..... .+. .....+ ++|+|+++|++|.+++++..+.+.+.. ++.+++++++++|.++.|.
T Consensus 248 ~~~~~l~~~~~----~~~-----~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~ 318 (332)
T TIGR01607 248 NLASELIKATD----TLD-----CDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITIEPG 318 (332)
T ss_pred HHHHHHHHHHH----HHH-----hhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCccCCC
Confidence 11111111000 000 011112 789999999999999999998887765 5689999999999999985
Q ss_pred hHhHHHHHHHHHhc
Q 024065 252 PQKLCDCLSQISLN 265 (273)
Q Consensus 252 ~~~~~~~i~~fl~~ 265 (273)
++++.+.|.+||++
T Consensus 319 ~~~v~~~i~~wL~~ 332 (332)
T TIGR01607 319 NEEVLKKIIEWISN 332 (332)
T ss_pred HHHHHHHHHHHhhC
Confidence 58899999999863
No 47
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.95 E-value=5.9e-29 Score=168.06 Aligned_cols=235 Identities=12% Similarity=0.044 Sum_probs=163.6
Q ss_pred cCCCCceEEEEccCC-CchhhHHHHHHHHhhC-CcEEEEeccCCCCCCCCCcCC--CcchhhchHHHHHHHHhCCCCCcE
Q 024065 5 VGMEEKHFVLVHGVN-HGAWCWYKLKARLVAG-GHRVTAVDLAASGINMKRIED--VHTFHAYSEPLMEVLASLPAEEKV 80 (273)
Q Consensus 5 ~g~~~~~vv~lhG~~-~~~~~~~~~~~~l~~~-g~~vi~~d~~G~G~s~~~~~~--~~~~~~~~~~l~~~l~~~~~~~~~ 80 (273)
.|.+...|++++|.- +....|.+....|-+. -+.|+++|.||+|.|.++... ..-+..-+++...+++.+ ..+++
T Consensus 38 ~G~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aL-k~~~f 116 (277)
T KOG2984|consen 38 YGHGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLMEAL-KLEPF 116 (277)
T ss_pred cCCCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHHHHh-CCCCe
Confidence 355566899999984 4555688877776553 289999999999999877653 123445567778888999 89999
Q ss_pred EEEEechhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCCcccccccc
Q 024065 81 ILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGR 160 (273)
Q Consensus 81 ~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (273)
.++|||-||..|+..|+++++.|.++|+.++..-... .....+..+. ....|... .+.+....++.
T Consensus 117 svlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~-~~~ma~kgiR-----dv~kWs~r--------~R~P~e~~Yg~ 182 (277)
T KOG2984|consen 117 SVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNH-LGAMAFKGIR-----DVNKWSAR--------GRQPYEDHYGP 182 (277)
T ss_pred eEeeecCCCeEEEEeeccChhhhhhheeecccceecc-hhHHHHhchH-----HHhhhhhh--------hcchHHHhcCH
Confidence 9999999999999999999999999999987532111 1111112211 23344433 23333444455
Q ss_pred hhhhhhhhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCCCceEEEE
Q 024065 161 EFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEI 240 (273)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 240 (273)
+.+......... ...++.. .-....-...+..++||+|+++|++|++++...+..+....+.++++++
T Consensus 183 e~f~~~wa~wvD-----~v~qf~~-------~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a~~~~~ 250 (277)
T KOG2984|consen 183 ETFRTQWAAWVD-----VVDQFHS-------FCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLAKVEIH 250 (277)
T ss_pred HHHHHHHHHHHH-----HHHHHhh-------cCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcccceEEEc
Confidence 555443322111 0111100 0000111222456699999999999999999999888899999999999
Q ss_pred ecCCccccccChHhHHHHHHHHHhcc
Q 024065 241 KGGDHMAMLSDPQKLCDCLSQISLNR 266 (273)
Q Consensus 241 ~~~gH~~~~~~~~~~~~~i~~fl~~~ 266 (273)
|.++|.+++.-+++|++.+.+||++.
T Consensus 251 peGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 251 PEGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred cCCCcceeeechHHHHHHHHHHHhcc
Confidence 99999999999999999999999864
No 48
>PRK10985 putative hydrolase; Provisional
Probab=99.95 E-value=2.7e-27 Score=183.08 Aligned_cols=247 Identities=14% Similarity=0.046 Sum_probs=139.9
Q ss_pred CCceEEEEccCCCchhh--HHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHH----hCCCCCcEE
Q 024065 8 EEKHFVLVHGVNHGAWC--WYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLA----SLPAEEKVI 81 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~----~~~~~~~~~ 81 (273)
.+|+||++||++++... +..++..|.++||+|+++|+||||.++......+. ....+|+..+++ .+ +..+++
T Consensus 57 ~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~-~~~~~D~~~~i~~l~~~~-~~~~~~ 134 (324)
T PRK10985 57 HKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYH-SGETEDARFFLRWLQREF-GHVPTA 134 (324)
T ss_pred CCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceEC-CCchHHHHHHHHHHHHhC-CCCCEE
Confidence 46899999999877543 46788999999999999999999987543222122 223455544443 34 667899
Q ss_pred EEEechhHHHHHHHHHHCCCc--cceeEEeeccCCCCCCCcchhHhhhhhhc-cC-CCccchhhhhhhccCCCCCccccc
Q 024065 82 LVGHSLGGVTLALAADKFPHK--ISVAVFVTAFMPDTTHRPSFVLEQYSEKM-GK-EDDSWLDTQFSQCDASNPSHISML 157 (273)
Q Consensus 82 lvG~S~Gg~~a~~~a~~~p~~--v~~lil~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~ 157 (273)
++||||||.++..++.++++. +.++|+++++....... .......... .. -...+......... . ......
T Consensus 135 ~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~~~~~~--~-~~~~~~ 209 (324)
T PRK10985 135 AVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACS--YRMEQGFSRVYQRYLLNLLKANAARKLA--A-YPGTLP 209 (324)
T ss_pred EEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHH--HHHhhhHHHHHHHHHHHHHHHHHHHHHH--h-cccccc
Confidence 999999999988888877654 88999888754211100 0000000000 00 00000000000000 0 000000
Q ss_pred ccchhhhhhhhcCCCchhHHHhhhhccC---CccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCCC
Q 024065 158 FGREFLTIKIYQLCPPEDLELAKMLVRP---GSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPV 234 (273)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~ 234 (273)
...+.+ .... ...........+ .......+...........+++|+++|+|++|++++++....+.+..++
T Consensus 210 ~~~~~~----~~~~--~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~ 283 (324)
T PRK10985 210 INLAQL----KSVR--RLREFDDLITARIHGFADAIDYYRQCSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPPN 283 (324)
T ss_pred CCHHHH----hcCC--cHHHHhhhheeccCCCCCHHHHHHHCChHHHHhCCCCCEEEEecCCCCCCChhhChHHHHhCCC
Confidence 000000 0000 000000000000 0001111111222233456799999999999999999888888788889
Q ss_pred ceEEEEecCCccccccCh-----HhHHHHHHHHHhccc
Q 024065 235 NEVMEIKGGDHMAMLSDP-----QKLCDCLSQISLNRH 267 (273)
Q Consensus 235 ~~~~~~~~~gH~~~~~~~-----~~~~~~i~~fl~~~~ 267 (273)
+++++++++||+.+++.. -...+.+.+|+....
T Consensus 284 ~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~~ 321 (324)
T PRK10985 284 VEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTYL 321 (324)
T ss_pred eEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHhh
Confidence 999999999999998742 356677888886543
No 49
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.95 E-value=4.6e-27 Score=183.63 Aligned_cols=256 Identities=15% Similarity=0.147 Sum_probs=150.9
Q ss_pred CCceEEEEccCCCchhh-------------HHHHHH---HHhhCCcEEEEeccCCCCCCCCC-----------c------
Q 024065 8 EEKHFVLVHGVNHGAWC-------------WYKLKA---RLVAGGHRVTAVDLAASGINMKR-----------I------ 54 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~-------------~~~~~~---~l~~~g~~vi~~d~~G~G~s~~~-----------~------ 54 (273)
..+.||++|++.+++.. |..++. .|-...|.||++|..|-|.|+.| +
T Consensus 55 ~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~ 134 (389)
T PRK06765 55 KSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKPY 134 (389)
T ss_pred CCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCcc
Confidence 35799999999886532 555543 23333499999999987653211 1
Q ss_pred ---CCCcchhhchHHHHHHHHhCCCCCcEE-EEEechhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhh
Q 024065 55 ---EDVHTFHAYSEPLMEVLASLPAEEKVI-LVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEK 130 (273)
Q Consensus 55 ---~~~~~~~~~~~~l~~~l~~~~~~~~~~-lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~ 130 (273)
-..++++++++++.++++++ +.++++ ++||||||++++.+|.++|++|+++|++++...................
T Consensus 135 ~~~fP~~t~~d~~~~~~~ll~~l-gi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~~~~~~~~~~~~~~~a 213 (389)
T PRK06765 135 GMDFPVVTILDFVRVQKELIKSL-GIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQNDAWTSVNVLQNWAEA 213 (389)
T ss_pred CCCCCcCcHHHHHHHHHHHHHHc-CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCCChhHHHHHHHHHHHH
Confidence 12368999999999999999 899987 9999999999999999999999999999876332211101111111111
Q ss_pred ccCCCccchhhhhhhcc-CC------CCCcccccccchhhhhhhhcCC---C------c---hhHHHhhh----hcc---
Q 024065 131 MGKEDDSWLDTQFSQCD-AS------NPSHISMLFGREFLTIKIYQLC---P------P---EDLELAKM----LVR--- 184 (273)
Q Consensus 131 ~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~---~------~---~~~~~~~~----~~~--- 184 (273)
+. ....|......... +. ........+.++++...+.... . . ....+... +..
T Consensus 214 i~-~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~D 292 (389)
T PRK06765 214 IR-LDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFEKEINKATYRRAELVD 292 (389)
T ss_pred HH-hCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHHHHHHHHHHHhhhccC
Confidence 10 00111000000000 00 0000000111111111111100 0 0 00000000 000
Q ss_pred CCccc--ccccccc-------CcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCC----CceEEEEec-CCcccccc
Q 024065 185 PGSMF--IDNLSKE-------SKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYP----VNEVMEIKG-GDHMAMLS 250 (273)
Q Consensus 185 ~~~~~--~~~~~~~-------~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~-~gH~~~~~ 250 (273)
+.... ...+... +....+..+++|+|+|+|++|.++|++..+.+.+.++ +++++++++ +||+.+++
T Consensus 293 an~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le 372 (389)
T PRK06765 293 ANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGVF 372 (389)
T ss_pred hhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhhc
Confidence 00000 0000000 1122345679999999999999999999999988886 689999985 99999999
Q ss_pred ChHhHHHHHHHHHhc
Q 024065 251 DPQKLCDCLSQISLN 265 (273)
Q Consensus 251 ~~~~~~~~i~~fl~~ 265 (273)
+|+++++.|.+||++
T Consensus 373 ~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 373 DIHLFEKKIYEFLNR 387 (389)
T ss_pred CHHHHHHHHHHHHcc
Confidence 999999999999975
No 50
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.95 E-value=9.2e-26 Score=178.52 Aligned_cols=217 Identities=13% Similarity=0.138 Sum_probs=139.6
Q ss_pred CCceEEEEccCCCch-hhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCC--CCCcEEEEE
Q 024065 8 EEKHFVLVHGVNHGA-WCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP--AEEKVILVG 84 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~-~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~lvG 84 (273)
..|+||++||+++.. ..|..+.+.|.++||.|+++|+||+|.|...... .+.......+.+.+.... +.+++.++|
T Consensus 193 ~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~-~d~~~~~~avld~l~~~~~vd~~ri~l~G 271 (414)
T PRK05077 193 PFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLT-QDSSLLHQAVLNALPNVPWVDHTRVAAFG 271 (414)
T ss_pred CccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCcc-ccHHHHHHHHHHHHHhCcccCcccEEEEE
Confidence 356677666766553 5688889999999999999999999999653211 233444455555555442 457899999
Q ss_pred echhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCCcccccccchhhh
Q 024065 85 HSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLT 164 (273)
Q Consensus 85 ~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (273)
||+||.+++.+|..+|++|+++|+++++........ ...... +............
T Consensus 272 ~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~-----~~~~~~---p~~~~~~la~~lg----------------- 326 (414)
T PRK05077 272 FRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDP-----KRQQQV---PEMYLDVLASRLG----------------- 326 (414)
T ss_pred EChHHHHHHHHHHhCCcCceEEEEECCccchhhcch-----hhhhhc---hHHHHHHHHHHhC-----------------
Confidence 999999999999999999999999988643111100 000000 0000000000000
Q ss_pred hhhhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCCCceEEEEecCC
Q 024065 165 IKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGD 244 (273)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~g 244 (273)
............ ..... +...... ...+++|+|+|+|++|.++|++..+.+.+..++.++++++++
T Consensus 327 -----~~~~~~~~l~~~-l~~~s-----l~~~~~l--~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~~l~~i~~~- 392 (414)
T PRK05077 327 -----MHDASDEALRVE-LNRYS-----LKVQGLL--GRRCPTPMLSGYWKNDPFSPEEDSRLIASSSADGKLLEIPFK- 392 (414)
T ss_pred -----CCCCChHHHHHH-hhhcc-----chhhhhh--ccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCCCeEEEccCC-
Confidence 000000000000 00000 0000000 134589999999999999999999999999999999999976
Q ss_pred ccccccChHhHHHHHHHHHhcc
Q 024065 245 HMAMLSDPQKLCDCLSQISLNR 266 (273)
Q Consensus 245 H~~~~~~~~~~~~~i~~fl~~~ 266 (273)
++.+.++++.+.+.+||++.
T Consensus 393 --~~~e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 393 --PVYRNFDKALQEISDWLEDR 412 (414)
T ss_pred --CccCCHHHHHHHHHHHHHHH
Confidence 56789999999999999864
No 51
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.94 E-value=7e-26 Score=170.98 Aligned_cols=233 Identities=13% Similarity=0.094 Sum_probs=136.6
Q ss_pred CCceEEEEccCCC----chhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhC----CCCCc
Q 024065 8 EEKHFVLVHGVNH----GAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL----PAEEK 79 (273)
Q Consensus 8 ~~~~vv~lhG~~~----~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~----~~~~~ 79 (273)
.+++||++||++. +...|..+++.|+++||+|+++|+||||.|+... .+++++.+|+.++++.+ .+.++
T Consensus 25 ~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~---~~~~~~~~d~~~~~~~l~~~~~g~~~ 101 (274)
T TIGR03100 25 HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN---LGFEGIDADIAAAIDAFREAAPHLRR 101 (274)
T ss_pred CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC---CCHHHHHHHHHHHHHHHHhhCCCCCc
Confidence 3668888888653 3445678899999999999999999999987542 46677788888887776 24567
Q ss_pred EEEEEechhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCCccccccc
Q 024065 80 VILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFG 159 (273)
Q Consensus 80 ~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (273)
++++|||+||.+++.++.. +++|+++|+++|...............+..........| ... .. . .+.
T Consensus 102 i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~--g------~~~ 168 (274)
T TIGR03100 102 IVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQAASRIRHYYLGQLLSADFW-RKL---LS--G------EVN 168 (274)
T ss_pred EEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccchHHHHHHHHHHHHhChHHH-HHh---cC--C------Ccc
Confidence 9999999999999999864 568999999998643222111111111111000000000 000 00 0 000
Q ss_pred chhhhhhhhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHH------HHHHHhC-
Q 024065 160 REFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQ------HWMIQNY- 232 (273)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~------~~~~~~~- 232 (273)
.......+... .... .. ....... ..+. ......+..+++|+|+++|++|...+ ... +.+.+.+
T Consensus 169 ~~~~~~~~~~~----~~~~-~~-~~~~~~~-~~~~-~~~~~~l~~~~~P~ll~~g~~D~~~~-~~~~~~~~~~~~~~~l~ 239 (274)
T TIGR03100 169 LGSSLRGLGDA----LLKA-RQ-KGDEVAH-GGLA-ERMKAGLERFQGPVLFILSGNDLTAQ-EFADSVLGEPAWRGALE 239 (274)
T ss_pred HHHHHHHHHHH----HHhh-hh-cCCCccc-chHH-HHHHHHHHhcCCcEEEEEcCcchhHH-HHHHHhccChhhHHHhh
Confidence 00000000000 0000 00 0000000 0000 00011122348999999999998863 222 4444544
Q ss_pred -CCceEEEEecCCccccccCh-HhHHHHHHHHHhc
Q 024065 233 -PVNEVMEIKGGDHMAMLSDP-QKLCDCLSQISLN 265 (273)
Q Consensus 233 -~~~~~~~~~~~gH~~~~~~~-~~~~~~i~~fl~~ 265 (273)
++++++.+++++|++..+.. +++.+.|.+||++
T Consensus 240 ~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 240 DPGIERVEIDGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred cCCeEEEecCCCCcccccHHHHHHHHHHHHHHHhC
Confidence 78999999999999866655 9999999999963
No 52
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.94 E-value=3.5e-25 Score=177.62 Aligned_cols=239 Identities=17% Similarity=0.075 Sum_probs=148.2
Q ss_pred CCceEEEEccCCCchhhHH-----HHHHHHhhCCcEEEEeccCCCCCCCCCcC-CCcchhhchHHHHHHHHhCCCCCcEE
Q 024065 8 EEKHFVLVHGVNHGAWCWY-----KLKARLVAGGHRVTAVDLAASGINMKRIE-DVHTFHAYSEPLMEVLASLPAEEKVI 81 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~-----~~~~~l~~~g~~vi~~d~~G~G~s~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~ 81 (273)
.++|||++||+......|+ .+++.|.++||+|+++|++|+|.|..... ..|..+.+.+.+..+++.+ +.++++
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~-g~~kv~ 265 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAIT-GEKQVN 265 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhc-CCCCeE
Confidence 4789999999998888885 79999999999999999999998865432 2234445566677777777 889999
Q ss_pred EEEechhHHHHH----HHHHHC-CCccceeEEeeccCCCCCCCcch---------hHhhhhhhccCCCccchhhhhhhcc
Q 024065 82 LVGHSLGGVTLA----LAADKF-PHKISVAVFVTAFMPDTTHRPSF---------VLEQYSEKMGKEDDSWLDTQFSQCD 147 (273)
Q Consensus 82 lvG~S~Gg~~a~----~~a~~~-p~~v~~lil~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (273)
++||||||.++. .+++.+ |++|++++++++........... ..+......+......+...+....
T Consensus 266 lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~lr 345 (532)
T TIGR01838 266 CVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSLLR 345 (532)
T ss_pred EEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHhcC
Confidence 999999999852 245555 78999999999875433211110 0111111111111111111222111
Q ss_pred CCCCCcccccccchhhhhhhhcC-------------CCc----hhHHHhhhhccCCccccccccccCcCCccCcccceEE
Q 024065 148 ASNPSHISMLFGREFLTIKIYQL-------------CPP----EDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRV 210 (273)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl 210 (273)
+ .......++...+... ... ........++.........+.-......+..+++|++
T Consensus 346 p------~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL~~I~vPvL 419 (532)
T TIGR01838 346 E------NDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLDLSKVKVPVY 419 (532)
T ss_pred h------hhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecchhhCCCCEE
Confidence 0 0000000011111110 100 0111222222222222222333334455677899999
Q ss_pred EEeecCCCCCCHHHHHHHHHhCCCceEEEEecCCccccccChH
Q 024065 211 YLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDHMAMLSDPQ 253 (273)
Q Consensus 211 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 253 (273)
++.|++|.++|++.++.+.+.+++.+..+++++||.+++++|.
T Consensus 420 vV~G~~D~IvP~~sa~~l~~~i~~~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 420 IIATREDHIAPWQSAYRGAALLGGPKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred EEeeCCCCcCCHHHHHHHHHHCCCCEEEEECCCCCchHhhCCC
Confidence 9999999999999999999999999999999999999998874
No 53
>PRK11071 esterase YqiA; Provisional
Probab=99.94 E-value=9.1e-25 Score=155.21 Aligned_cols=184 Identities=16% Similarity=0.074 Sum_probs=125.8
Q ss_pred ceEEEEccCCCchhhHHH--HHHHHhh--CCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEe
Q 024065 10 KHFVLVHGVNHGAWCWYK--LKARLVA--GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGH 85 (273)
Q Consensus 10 ~~vv~lhG~~~~~~~~~~--~~~~l~~--~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~ 85 (273)
|+||++||++++...|.. +.+.+.+ .+|+|+++|+|||+ ++.++++.++++++ +.++++++||
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~------------~~~~~~l~~l~~~~-~~~~~~lvG~ 68 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP------------ADAAELLESLVLEH-GGDPLGLVGS 68 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH------------HHHHHHHHHHHHHc-CCCCeEEEEE
Confidence 689999999999999974 4466654 26999999999974 35788899999998 8889999999
Q ss_pred chhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCCcccccccchhhhh
Q 024065 86 SLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTI 165 (273)
Q Consensus 86 S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (273)
||||.+++.+|.++|. ++|+++|+.. +......+.... .. ........+...++.+
T Consensus 69 S~Gg~~a~~~a~~~~~---~~vl~~~~~~-----~~~~~~~~~~~~-----------~~-----~~~~~~~~~~~~~~~d 124 (190)
T PRK11071 69 SLGGYYATWLSQCFML---PAVVVNPAVR-----PFELLTDYLGEN-----------EN-----PYTGQQYVLESRHIYD 124 (190)
T ss_pred CHHHHHHHHHHHHcCC---CEEEECCCCC-----HHHHHHHhcCCc-----------cc-----ccCCCcEEEcHHHHHH
Confidence 9999999999999983 4688887532 111111111000 00 0000000111111111
Q ss_pred hhhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCCCceEEEEecCCc
Q 024065 166 KIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDH 245 (273)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH 245 (273)
. ..... .... ..+|+++++|++|.++|.+.+.++.+. ++.++++|++|
T Consensus 125 ~---------------------------~~~~~-~~i~-~~~~v~iihg~~De~V~~~~a~~~~~~---~~~~~~~ggdH 172 (190)
T PRK11071 125 L---------------------------KVMQI-DPLE-SPDLIWLLQQTGDEVLDYRQAVAYYAA---CRQTVEEGGNH 172 (190)
T ss_pred H---------------------------HhcCC-ccCC-ChhhEEEEEeCCCCcCCHHHHHHHHHh---cceEEECCCCc
Confidence 0 00000 0011 277899999999999999999988884 57778899999
Q ss_pred cccccChHhHHHHHHHHHh
Q 024065 246 MAMLSDPQKLCDCLSQISL 264 (273)
Q Consensus 246 ~~~~~~~~~~~~~i~~fl~ 264 (273)
.+ +..+++.+.+.+|++
T Consensus 173 ~f--~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 173 AF--VGFERYFNQIVDFLG 189 (190)
T ss_pred ch--hhHHHhHHHHHHHhc
Confidence 87 445888899999975
No 54
>PRK13604 luxD acyl transferase; Provisional
Probab=99.93 E-value=1.5e-24 Score=161.04 Aligned_cols=201 Identities=12% Similarity=0.075 Sum_probs=129.2
Q ss_pred CCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCC-CCCCCCcCCCcchhhchHHHHHHHHhC--CCCCcEEEEE
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAAS-GINMKRIEDVHTFHAYSEPLMEVLASL--PAEEKVILVG 84 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~-G~s~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~lvG 84 (273)
..++||++||++.+...+..+++.|.++||.|+.+|.||+ |.|+..... .+......|+.++++.+ ....++.|+|
T Consensus 36 ~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~-~t~s~g~~Dl~aaid~lk~~~~~~I~LiG 114 (307)
T PRK13604 36 KNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDE-FTMSIGKNSLLTVVDWLNTRGINNLGLIA 114 (307)
T ss_pred CCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCcccc-CcccccHHHHHHHHHHHHhcCCCceEEEE
Confidence 3578999999999887799999999999999999999988 999765533 35555678886666665 2557899999
Q ss_pred echhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCCccc-----ccc-
Q 024065 85 HSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHIS-----MLF- 158 (273)
Q Consensus 85 ~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~- 158 (273)
|||||.+|+..|... +++++|+.+|..... ......... .... +.. ...+.. ..+
T Consensus 115 ~SmGgava~~~A~~~--~v~~lI~~sp~~~l~-----d~l~~~~~~---~~~~-----~p~----~~lp~~~d~~g~~l~ 175 (307)
T PRK13604 115 ASLSARIAYEVINEI--DLSFLITAVGVVNLR-----DTLERALGY---DYLS-----LPI----DELPEDLDFEGHNLG 175 (307)
T ss_pred ECHHHHHHHHHhcCC--CCCEEEEcCCcccHH-----HHHHHhhhc---cccc-----Ccc----ccccccccccccccc
Confidence 999999997777643 489999988864311 111110000 0000 000 000000 000
Q ss_pred cchhhhhhhhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCC--Cce
Q 024065 159 GREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYP--VNE 236 (273)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~--~~~ 236 (273)
...++...+..... . ..........+++|+|+|||++|.++|.+.++.+.+.++ +++
T Consensus 176 ~~~f~~~~~~~~~~-------------------~--~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kk 234 (307)
T PRK13604 176 SEVFVTDCFKHGWD-------------------T--LDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCK 234 (307)
T ss_pred HHHHHHHHHhcCcc-------------------c--cccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcE
Confidence 01111100000000 0 000011122237899999999999999999999998875 689
Q ss_pred EEEEecCCccccc
Q 024065 237 VMEIKGGDHMAML 249 (273)
Q Consensus 237 ~~~~~~~gH~~~~ 249 (273)
+++++|++|.+..
T Consensus 235 l~~i~Ga~H~l~~ 247 (307)
T PRK13604 235 LYSLIGSSHDLGE 247 (307)
T ss_pred EEEeCCCccccCc
Confidence 9999999998664
No 55
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.93 E-value=2.3e-27 Score=175.82 Aligned_cols=219 Identities=16% Similarity=0.173 Sum_probs=129.9
Q ss_pred cEEEEeccCCCCCCCC---CcCCCcchhhchHHHHHHHHhCCCCCcEEEEEechhHHHHHHHHHHCCCccceeEEeeccC
Q 024065 37 HRVTAVDLAASGINMK---RIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFM 113 (273)
Q Consensus 37 ~~vi~~d~~G~G~s~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~ 113 (273)
|+|+++|+||+|.|++ .....++.+++++++..+++.+ +.++++++||||||.+++.+|.++|++|+++|+++++.
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~ 79 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREAL-GIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPP 79 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHH-TTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESS
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHh-CCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeec
Confidence 7899999999999996 4456689999999999999999 88899999999999999999999999999999999852
Q ss_pred --CCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCCccccccc----chhhhhhhhcCCCc-hhHHHhhhhccCC
Q 024065 114 --PDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFG----REFLTIKIYQLCPP-EDLELAKMLVRPG 186 (273)
Q Consensus 114 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 186 (273)
.............+..........+.......... .......... .+............ ...........
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 156 (230)
T PF00561_consen 80 DLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLG-RWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNMFW-- 156 (230)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHH--
T ss_pred cchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhh-hhhhheeeccCccccchhhccchhhhhHHHHHHHHhhhcc--
Confidence 00000000000000000000000000000000000 0000000000 00000000000000 00000000000
Q ss_pred ccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCCCceEEEEecCCccccccChHhHHHHHH
Q 024065 187 SMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDHMAMLSDPQKLCDCLS 260 (273)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~ 260 (273)
.................+++|+++++|++|.++|++....+.+.+|+.++++++++||+.++++|+++++.|.
T Consensus 157 -~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 157 -NALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPNSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp -HHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTTEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred -ccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 0000111111112234469999999999999999999999999999999999999999999999999998875
No 56
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.93 E-value=1e-24 Score=170.64 Aligned_cols=250 Identities=12% Similarity=0.114 Sum_probs=144.1
Q ss_pred CceEEEEccCCCchhhH-----HHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHH-HHH----HHHhCCCCC
Q 024065 9 EKHFVLVHGVNHGAWCW-----YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEP-LME----VLASLPAEE 78 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~-----~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~-l~~----~l~~~~~~~ 78 (273)
++|||++||+..+...+ +.+++.|.++||+|+++|++|+|.|+.. .++++++.+ +.+ +.+.. +.+
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~----~~~~d~~~~~~~~~v~~l~~~~-~~~ 136 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY----LTLDDYINGYIDKCVDYICRTS-KLD 136 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc----CCHHHHHHHHHHHHHHHHHHHh-CCC
Confidence 56899999987666554 6899999999999999999999987643 356666533 433 44444 778
Q ss_pred cEEEEEechhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcch-h------HhhhhhhccCCCccchhhhhhhccCCCC
Q 024065 79 KVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSF-V------LEQYSEKMGKEDDSWLDTQFSQCDASNP 151 (273)
Q Consensus 79 ~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (273)
+++++||||||.+++.++..+|++|+++|+++++.......... . ...........+..++...+....+ ..
T Consensus 137 ~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~l~p-~~ 215 (350)
T TIGR01836 137 QISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTMGNIPGELLNLTFLMLKP-FS 215 (350)
T ss_pred cccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHHHHHhcCCCCHHHHHHHHHhcCc-ch
Confidence 99999999999999999999999999999999875432211000 0 0000111000011111111111000 00
Q ss_pred Ccc------ccc-ccchhhhhhh-----hcCCCchh----HHHhhhhccCCccccccccccCcCCccCcccceEEEEeec
Q 024065 152 SHI------SML-FGREFLTIKI-----YQLCPPED----LELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCE 215 (273)
Q Consensus 152 ~~~------~~~-~~~~~~~~~~-----~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~ 215 (273)
... ... .+++...... .....+.. .................+.-.........+++|+++++|+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g~~~~~~~~~~l~~i~~Pvliv~G~ 295 (350)
T TIGR01836 216 LGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLINGEVEIGGRKVDLKNIKMPILNIYAE 295 (350)
T ss_pred hhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCCeeEECCEEccHHhCCCCeEEEecC
Confidence 000 000 0011111110 01110100 0111111111111101111011122244569999999999
Q ss_pred CCCCCCHHHHHHHHHhCCC--ceEEEEecCCccccccCh---HhHHHHHHHHHhc
Q 024065 216 EDIGLPKQFQHWMIQNYPV--NEVMEIKGGDHMAMLSDP---QKLCDCLSQISLN 265 (273)
Q Consensus 216 ~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~~ 265 (273)
+|.++|++..+.+.+.+++ .++++++ +||..++..+ +++...|.+||++
T Consensus 296 ~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 296 RDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred CCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHHh
Confidence 9999999999999888864 4667777 8998877654 7899999999975
No 57
>PRK10566 esterase; Provisional
Probab=99.92 E-value=6.2e-24 Score=159.12 Aligned_cols=204 Identities=13% Similarity=0.091 Sum_probs=124.6
Q ss_pred CCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcch-------hhchHHHHHHHHhC-----C
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTF-------HAYSEPLMEVLASL-----P 75 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~-------~~~~~~l~~~l~~~-----~ 75 (273)
..|+||++||++++...|..++..|.++||+|+++|+||||.+...... .++ .+..+|+.++++.+ .
T Consensus 26 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 104 (249)
T PRK10566 26 PLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEA-RRLNHFWQILLQNMQEFPTLRAAIREEGWL 104 (249)
T ss_pred CCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccc-cchhhHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 3689999999999998999999999999999999999999986432111 111 12233443334332 1
Q ss_pred CCCcEEEEEechhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCCccc
Q 024065 76 AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHIS 155 (273)
Q Consensus 76 ~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (273)
+.++++++|||+||.+++.++.++|+....++++++.. ...+.... +.... . .
T Consensus 105 ~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~-----------~~~~~--~----~ 157 (249)
T PRK10566 105 LDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGY----------FTSLARTL-----------FPPLI--P----E 157 (249)
T ss_pred CccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHH----------HHHHHHHh-----------ccccc--c----c
Confidence 45789999999999999999998886444444443221 01110000 00000 0 0
Q ss_pred ccccchhhhhhhhcCCCchhHHHhhhhccCCccccccccccCcCCccCcc-cceEEEEeecCCCCCCHHHHHHHHHhCC-
Q 024065 156 MLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYG-SVKRVYLVCEEDIGLPKQFQHWMIQNYP- 233 (273)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Pvl~i~g~~D~~~~~~~~~~~~~~~~- 233 (273)
......... ....... ..........+ ++|+|+++|++|.++|++..+.+.+.++
T Consensus 158 ~~~~~~~~~------------~~~~~~~-----------~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~ 214 (249)
T PRK10566 158 TAAQQAEFN------------NIVAPLA-----------EWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRE 214 (249)
T ss_pred ccccHHHHH------------HHHHHHh-----------hcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHh
Confidence 000000000 0000000 00000111222 6899999999999999999888887664
Q ss_pred -----CceEEEEecCCccccccChHhHHHHHHHHHhcc
Q 024065 234 -----VNEVMEIKGGDHMAMLSDPQKLCDCLSQISLNR 266 (273)
Q Consensus 234 -----~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 266 (273)
+++++.++++||.+. + ...+.+.+||++.
T Consensus 215 ~g~~~~~~~~~~~~~~H~~~---~-~~~~~~~~fl~~~ 248 (249)
T PRK10566 215 RGLDKNLTCLWEPGVRHRIT---P-EALDAGVAFFRQH 248 (249)
T ss_pred cCCCcceEEEecCCCCCccC---H-HHHHHHHHHHHhh
Confidence 257778999999864 3 4568888888753
No 58
>PLN02872 triacylglycerol lipase
Probab=99.92 E-value=7.9e-24 Score=165.52 Aligned_cols=259 Identities=14% Similarity=0.111 Sum_probs=150.5
Q ss_pred CCceEEEEccCCCchhhHH------HHHHHHhhCCcEEEEeccCCCCCCCC----Cc--C--CCcchhhch-HHHHHHHH
Q 024065 8 EEKHFVLVHGVNHGAWCWY------KLKARLVAGGHRVTAVDLAASGINMK----RI--E--DVHTFHAYS-EPLMEVLA 72 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~------~~~~~l~~~g~~vi~~d~~G~G~s~~----~~--~--~~~~~~~~~-~~l~~~l~ 72 (273)
.+|+|+++||+++++..|. .+...|+++||+|+++|+||++.|.. .. . ..+++++++ .|+.++++
T Consensus 73 ~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id 152 (395)
T PLN02872 73 RGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIH 152 (395)
T ss_pred CCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHH
Confidence 4789999999999988883 45567888999999999999876532 11 1 136788888 79999998
Q ss_pred hC--CCCCcEEEEEechhHHHHHHHHHHCCC---ccceeEEeeccCCCCCCCcchhHhhhhh--------hccC----CC
Q 024065 73 SL--PAEEKVILVGHSLGGVTLALAADKFPH---KISVAVFVTAFMPDTTHRPSFVLEQYSE--------KMGK----ED 135 (273)
Q Consensus 73 ~~--~~~~~~~lvG~S~Gg~~a~~~a~~~p~---~v~~lil~~~~~~~~~~~~~~~~~~~~~--------~~~~----~~ 135 (273)
.+ ...++++++|||+||.+++.++ .+|+ +|+.+++++|.......... ....+.. .+.. ..
T Consensus 153 ~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~ 230 (395)
T PLN02872 153 YVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYLDHVTAP-LVLRMVFMHLDQMVVAMGIHQLNFR 230 (395)
T ss_pred HHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhhccCCCH-HHHHHHHHhHHHHHHHhcCceecCC
Confidence 86 1347999999999999998555 6776 68888999887543221111 1111000 0000 00
Q ss_pred ccchhhhhhhccCCCC----------Ccccccccchhhhhhhhc---CCCchhHHHhhhhccCCcc--cc----cc---c
Q 024065 136 DSWLDTQFSQCDASNP----------SHISMLFGREFLTIKIYQ---LCPPEDLELAKMLVRPGSM--FI----DN---L 193 (273)
Q Consensus 136 ~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~--~~----~~---~ 193 (273)
...........-. .. ......++...+...... ..+.....-..+..+.... +. .. +
T Consensus 231 ~~~~~~~~~~~C~-~~~~c~~~~~~~~g~~~~~n~~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Y 309 (395)
T PLN02872 231 SDVLVKLLDSICE-GHMDCNDLLTSITGTNCCFNASRIDYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLY 309 (395)
T ss_pred cHHHHHHHHHHcc-CchhHHHHHHHHhCCCcccchhhhhHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHh
Confidence 0000000000000 00 000000111111111111 0000011111111111111 10 00 1
Q ss_pred cc-cCcCCccCcc--cceEEEEeecCCCCCCHHHHHHHHHhCCC-ceEEEEecCCcc---ccccChHhHHHHHHHHHhcc
Q 024065 194 SK-ESKFSDEGYG--SVKRVYLVCEEDIGLPKQFQHWMIQNYPV-NEVMEIKGGDHM---AMLSDPQKLCDCLSQISLNR 266 (273)
Q Consensus 194 ~~-~~~~~~~~~~--~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~---~~~~~~~~~~~~i~~fl~~~ 266 (273)
.. ..+.-.+..+ ++|+++++|++|.+++++..+.+.+.+++ .+++.+++++|. ...+.|+++.+.|.+|+++.
T Consensus 310 g~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~ 389 (395)
T PLN02872 310 GQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSL 389 (395)
T ss_pred CCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHh
Confidence 01 1122234444 57999999999999999999999999887 588899999996 34488999999999999876
Q ss_pred ccc
Q 024065 267 HDI 269 (273)
Q Consensus 267 ~~~ 269 (273)
...
T Consensus 390 ~~~ 392 (395)
T PLN02872 390 GKS 392 (395)
T ss_pred hhc
Confidence 543
No 59
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.92 E-value=1.4e-23 Score=183.64 Aligned_cols=255 Identities=17% Similarity=0.118 Sum_probs=149.9
Q ss_pred CCceEEEEccCCCchhhHHHH-----HHHHhhCCcEEEEeccCCCCCCCCCcCC-CcchhhchHHHHHHHHh---CCCCC
Q 024065 8 EEKHFVLVHGVNHGAWCWYKL-----KARLVAGGHRVTAVDLAASGINMKRIED-VHTFHAYSEPLMEVLAS---LPAEE 78 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~-----~~~l~~~g~~vi~~d~~G~G~s~~~~~~-~~~~~~~~~~l~~~l~~---~~~~~ 78 (273)
.++||||+||++.+...|+.. ++.|.++||+|+++|+ |.|+.+... ..++.+++..+.+.++. + ..+
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~-~~~ 141 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDV-TGR 141 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHh-hCC
Confidence 478999999999999999864 8899999999999994 666554321 24666776666666654 3 447
Q ss_pred cEEEEEechhHHHHHHHHHHC-CCccceeEEeeccCCCCCCCcchhHh------------hhhhhccCCCccchhh-hhh
Q 024065 79 KVILVGHSLGGVTLALAADKF-PHKISVAVFVTAFMPDTTHRPSFVLE------------QYSEKMGKEDDSWLDT-QFS 144 (273)
Q Consensus 79 ~~~lvG~S~Gg~~a~~~a~~~-p~~v~~lil~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~-~~~ 144 (273)
+++++||||||.+++.+++.+ +++|+++|+++++............. .+.... ....|+.. .+.
T Consensus 142 ~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~ 219 (994)
T PRK07868 142 DVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRL--DIPGWMARTGFQ 219 (994)
T ss_pred ceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcC--CCCHHHHHHHHH
Confidence 899999999999999998755 46899999988874322111100000 000000 11111110 010
Q ss_pred hccCC----------CCCcc-cccccchhhhhhhhcC-----CCchhHHHhhhhccCCccccccccccCcCCccCcccce
Q 024065 145 QCDAS----------NPSHI-SMLFGREFLTIKIYQL-----CPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVK 208 (273)
Q Consensus 145 ~~~~~----------~~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 208 (273)
...+. ..... .....++......... ...........+..........+........+..+++|
T Consensus 220 ~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~~i~~P 299 (994)
T PRK07868 220 MLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLADITCP 299 (994)
T ss_pred hcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEcchhhCCCC
Confidence 00000 00000 0000000001100000 00001111111111111111111111111235677999
Q ss_pred EEEEeecCCCCCCHHHHHHHHHhCCCceE-EEEecCCcccccc---ChHhHHHHHHHHHhcccc
Q 024065 209 RVYLVCEEDIGLPKQFQHWMIQNYPVNEV-MEIKGGDHMAMLS---DPQKLCDCLSQISLNRHD 268 (273)
Q Consensus 209 vl~i~g~~D~~~~~~~~~~~~~~~~~~~~-~~~~~~gH~~~~~---~~~~~~~~i~~fl~~~~~ 268 (273)
+|+|+|++|.++|++..+.+.+.++++++ .+++++||+.++- -++++...|.+||++...
T Consensus 300 ~L~i~G~~D~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~~ 363 (994)
T PRK07868 300 VLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLEG 363 (994)
T ss_pred EEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhcc
Confidence 99999999999999999999999999987 6789999998774 468899999999998754
No 60
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.91 E-value=4.6e-24 Score=151.72 Aligned_cols=104 Identities=26% Similarity=0.375 Sum_probs=89.2
Q ss_pred CCceEEEEccCCCchhhHHHHHHHHhhC-CcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhC--CCCCcEEEEE
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLKARLVAG-GHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL--PAEEKVILVG 84 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~~~l~~~-g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~lvG 84 (273)
.+|.++++||+|.+.-.|..++..|..+ ..+|+++|+||||+|........+.+.++.|+.++++.+ ....+++|||
T Consensus 73 ~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~~~~iilVG 152 (343)
T KOG2564|consen 73 EGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGELPPQIILVG 152 (343)
T ss_pred CccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccCCCceEEEe
Confidence 5889999999999999999999988764 357888999999999877766689999999999999988 3456899999
Q ss_pred echhHHHHHHHHHH--CCCccceeEEeecc
Q 024065 85 HSLGGVTLALAADK--FPHKISVAVFVTAF 112 (273)
Q Consensus 85 ~S~Gg~~a~~~a~~--~p~~v~~lil~~~~ 112 (273)
|||||.+|.+.|.. .|. +.+++.++-.
T Consensus 153 HSmGGaIav~~a~~k~lps-l~Gl~viDVV 181 (343)
T KOG2564|consen 153 HSMGGAIAVHTAASKTLPS-LAGLVVIDVV 181 (343)
T ss_pred ccccchhhhhhhhhhhchh-hhceEEEEEe
Confidence 99999999877653 454 8899988854
No 61
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.91 E-value=2.6e-22 Score=151.84 Aligned_cols=246 Identities=19% Similarity=0.188 Sum_probs=144.4
Q ss_pred CceEEEEccCCCchhhHHHHHHHHhhC--CcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEec
Q 024065 9 EKHFVLVHGVNHGAWCWYKLKARLVAG--GHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHS 86 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~~~~~~~l~~~--g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S 86 (273)
+|+++++||++++...|......+... .|+++++|+||||.|. .. .++...+++++..+++.+ +..+++++|||
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~--~~~~~~~~~~~~~~~~~~-~~~~~~l~G~S 96 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA--GYSLSAYADDLAALLDAL-GLEKVVLVGHS 96 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-cc--cccHHHHHHHHHHHHHHh-CCCceEEEEec
Confidence 569999999999999998843333332 1899999999999997 11 234555599999999999 87889999999
Q ss_pred hhHHHHHHHHHHCCCccceeEEeeccCCCCC-CCcc------hhHhhhhhhccCCCccchhhhhhhccCCCCCccccccc
Q 024065 87 LGGVTLALAADKFPHKISVAVFVTAFMPDTT-HRPS------FVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFG 159 (273)
Q Consensus 87 ~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (273)
+||.+++.++.++|+++++++++++...... .... .......... ............. ... ....+.
T Consensus 97 ~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--~~~-~~~~~~ 170 (282)
T COG0596 97 MGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLL---LGLDAAAFAALLA--ALG-LLAALA 170 (282)
T ss_pred ccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhh---hccchhhhhhhhh--ccc-cccccc
Confidence 9999999999999999999999997643110 0000 0000000000 0000000000000 000 000000
Q ss_pred chh---hhhhhhcCCCchhHHHhhhhcc-CCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCCC-
Q 024065 160 REF---LTIKIYQLCPPEDLELAKMLVR-PGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPV- 234 (273)
Q Consensus 160 ~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~- 234 (273)
... ...................... ....................+++|+++++|++|.+.|......+.+..++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~~ 250 (282)
T COG0596 171 AAARAGLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLAAALPND 250 (282)
T ss_pred ccchhccccccccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCCCC
Confidence 000 0000000000000000000000 00000000101011222444589999999999977777766777777885
Q ss_pred ceEEEEecCCccccccChHhHHHHHHHHHh
Q 024065 235 NEVMEIKGGDHMAMLSDPQKLCDCLSQISL 264 (273)
Q Consensus 235 ~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 264 (273)
.++.+++++||++++++|+.+.+.+.+|+.
T Consensus 251 ~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 251 ARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred ceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 899999999999999999999998888544
No 62
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.90 E-value=2.3e-22 Score=138.09 Aligned_cols=144 Identities=22% Similarity=0.323 Sum_probs=112.3
Q ss_pred eEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEechhHH
Q 024065 11 HFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGV 90 (273)
Q Consensus 11 ~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg~ 90 (273)
+||++||++++...|..+.+.|+++||.|+.+|+|++|.+... ...+++.+++. -+.. +.++++++|||+||.
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~----~~~~~~~~~~~--~~~~-~~~~i~l~G~S~Gg~ 73 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDGA----DAVERVLADIR--AGYP-DPDRIILIGHSMGGA 73 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHHS----HHHHHHHHHHH--HHHC-TCCEEEEEEETHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccchh----HHHHHHHHHHH--hhcC-CCCcEEEEEEccCcH
Confidence 6899999999999999999999999999999999999988322 13333333322 1123 668999999999999
Q ss_pred HHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCCcccccccchhhhhhhhcC
Q 024065 91 TLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQL 170 (273)
Q Consensus 91 ~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (273)
+++.++.+. .+++++|++++. + ....+
T Consensus 74 ~a~~~~~~~-~~v~~~v~~~~~-~--------~~~~~------------------------------------------- 100 (145)
T PF12695_consen 74 IAANLAARN-PRVKAVVLLSPY-P--------DSEDL------------------------------------------- 100 (145)
T ss_dssp HHHHHHHHS-TTESEEEEESES-S--------GCHHH-------------------------------------------
T ss_pred HHHHHhhhc-cceeEEEEecCc-c--------chhhh-------------------------------------------
Confidence 999999988 689999999972 0 00000
Q ss_pred CCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCC-CceEEEEecCCcc
Q 024065 171 CPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYP-VNEVMEIKGGDHM 246 (273)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~ 246 (273)
...++|+++++|++|..++.+..+.+.+.++ +.+++++++++|+
T Consensus 101 --------------------------------~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 101 --------------------------------AKIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp --------------------------------TTTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred --------------------------------hccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 0015699999999999999999999888876 5799999999996
No 63
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.88 E-value=2.5e-21 Score=132.67 Aligned_cols=219 Identities=16% Similarity=0.156 Sum_probs=139.7
Q ss_pred CceEEEEccCCCchhh--HHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCc--EEEEE
Q 024065 9 EKHFVLVHGVNHGAWC--WYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEK--VILVG 84 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~--~~lvG 84 (273)
...+|++||+-++... ...++..|.+.|+.++.+|++|.|.|+..-.. -.....++|+..+++++.+..+ .+++|
T Consensus 33 ~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~-Gn~~~eadDL~sV~q~~s~~nr~v~vi~g 111 (269)
T KOG4667|consen 33 TEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYY-GNYNTEADDLHSVIQYFSNSNRVVPVILG 111 (269)
T ss_pred ceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCcccc-CcccchHHHHHHHHHHhccCceEEEEEEe
Confidence 7789999999887755 45788899999999999999999999876543 2455667999999999933333 35889
Q ss_pred echhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhh-hhhccCCCCCcccccccchhh
Q 024065 85 HSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQ-FSQCDASNPSHISMLFGREFL 163 (273)
Q Consensus 85 ~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 163 (273)
||-||.+++.++.++++ ++-+|.+++-......- ..++......|.... +-...+ .+......+.++.+
T Consensus 112 HSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I--------~eRlg~~~l~~ike~Gfid~~~-rkG~y~~rvt~eSl 181 (269)
T KOG4667|consen 112 HSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGI--------NERLGEDYLERIKEQGFIDVGP-RKGKYGYRVTEESL 181 (269)
T ss_pred ecCccHHHHHHHHhhcC-chheEEcccccchhcch--------hhhhcccHHHHHHhCCceecCc-ccCCcCceecHHHH
Confidence 99999999999999987 77777666543211110 011110111111110 000000 00111111112211
Q ss_pred hhhhhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCCCceEEEEecC
Q 024065 164 TIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGG 243 (273)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (273)
...+..... .. ... -..+||||-++|..|.++|.+.+.++++.+|+-++.+++|+
T Consensus 182 mdrLntd~h------------------~a------clk-Id~~C~VLTvhGs~D~IVPve~AkefAk~i~nH~L~iIEgA 236 (269)
T KOG4667|consen 182 MDRLNTDIH------------------EA------CLK-IDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPNHKLEIIEGA 236 (269)
T ss_pred HHHHhchhh------------------hh------hcC-cCccCceEEEeccCCceeechhHHHHHHhccCCceEEecCC
Confidence 111111000 00 000 11289999999999999999999999999999999999999
Q ss_pred CccccccChHhHHHHHHHHHh
Q 024065 244 DHMAMLSDPQKLCDCLSQISL 264 (273)
Q Consensus 244 gH~~~~~~~~~~~~~i~~fl~ 264 (273)
.|..... ..+.......|.+
T Consensus 237 DHnyt~~-q~~l~~lgl~f~k 256 (269)
T KOG4667|consen 237 DHNYTGH-QSQLVSLGLEFIK 256 (269)
T ss_pred CcCccch-hhhHhhhcceeEE
Confidence 9986554 3445555555554
No 64
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.87 E-value=1.1e-20 Score=134.15 Aligned_cols=190 Identities=14% Similarity=0.126 Sum_probs=134.2
Q ss_pred CceEEEEccCCCchhhHHHHHHHHhh-CCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhC---C-CCCcEEEE
Q 024065 9 EKHFVLVHGVNHGAWCWYKLKARLVA-GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL---P-AEEKVILV 83 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~~~~~~~l~~-~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~---~-~~~~~~lv 83 (273)
.++++++||...+......+.-.|.. -+++|+++|++|+|.|...+.+. ...+|+.++.+.+ . ..++++|+
T Consensus 60 ~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~----n~y~Di~avye~Lr~~~g~~~~Iil~ 135 (258)
T KOG1552|consen 60 HPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSER----NLYADIKAVYEWLRNRYGSPERIILY 135 (258)
T ss_pred ceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCcccc----cchhhHHHHHHHHHhhcCCCceEEEE
Confidence 58999999996666654455555544 25899999999999999887653 3444444444444 3 36899999
Q ss_pred EechhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCCcccccccchhh
Q 024065 84 GHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFL 163 (273)
Q Consensus 84 G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (273)
|+|+|+..++.+|.+.| ++++||.+|...... -+. ...... ...+.+.
T Consensus 136 G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~r--------v~~---------------------~~~~~~-~~~d~f~ 183 (258)
T KOG1552|consen 136 GQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMR--------VAF---------------------PDTKTT-YCFDAFP 183 (258)
T ss_pred EecCCchhhhhHhhcCC--cceEEEeccchhhhh--------hhc---------------------cCcceE-Eeecccc
Confidence 99999999999999998 999999998632110 000 000000 0000000
Q ss_pred hhhhhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCCCc-eEEEEec
Q 024065 164 TIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVN-EVMEIKG 242 (273)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~ 242 (273)
.......++||+|+++|++|.+++......+.+..++. +-.++.|
T Consensus 184 ----------------------------------~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g 229 (258)
T KOG1552|consen 184 ----------------------------------NIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKG 229 (258)
T ss_pred ----------------------------------ccCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEec
Confidence 02224455999999999999999999999999999876 8889999
Q ss_pred CCccccccChHhHHHHHHHHHhccccc
Q 024065 243 GDHMAMLSDPQKLCDCLSQISLNRHDI 269 (273)
Q Consensus 243 ~gH~~~~~~~~~~~~~i~~fl~~~~~~ 269 (273)
+||.-..- ..++.+.+..|+......
T Consensus 230 ~gH~~~~~-~~~yi~~l~~f~~~~~~~ 255 (258)
T KOG1552|consen 230 AGHNDIEL-YPEYIEHLRRFISSVLPS 255 (258)
T ss_pred CCCccccc-CHHHHHHHHHHHHHhccc
Confidence 99986655 445668888888766543
No 65
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.87 E-value=3.2e-21 Score=136.02 Aligned_cols=225 Identities=13% Similarity=0.114 Sum_probs=150.4
Q ss_pred CCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHH-hCCCCCcEEEEEec
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLA-SLPAEEKVILVGHS 86 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~-~~~~~~~~~lvG~S 86 (273)
.+..++++|-.|+++..|+.+...|... ..++++.+||+|.--..+.. .+++++++.+...+. -. ..+++.++|||
T Consensus 6 ~~~~L~cfP~AGGsa~~fr~W~~~lp~~-iel~avqlPGR~~r~~ep~~-~di~~Lad~la~el~~~~-~d~P~alfGHS 82 (244)
T COG3208 6 ARLRLFCFPHAGGSASLFRSWSRRLPAD-IELLAVQLPGRGDRFGEPLL-TDIESLADELANELLPPL-LDAPFALFGHS 82 (244)
T ss_pred CCceEEEecCCCCCHHHHHHHHhhCCch-hheeeecCCCcccccCCccc-ccHHHHHHHHHHHhcccc-CCCCeeecccc
Confidence 3678999999999999999999999875 99999999999987544433 599999999999888 45 66899999999
Q ss_pred hhHHHHHHHHHHCC---CccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCCcccccccchhh
Q 024065 87 LGGVTLALAADKFP---HKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFL 163 (273)
Q Consensus 87 ~Gg~~a~~~a~~~p---~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (273)
|||++|.++|.+.. .....+.+.+...|....... .. .. ....++.......+ .+ ...+.+..+
T Consensus 83 mGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~--i~----~~--~D~~~l~~l~~lgG----~p-~e~led~El 149 (244)
T COG3208 83 MGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQ--IH----HL--DDADFLADLVDLGG----TP-PELLEDPEL 149 (244)
T ss_pred hhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCC--cc----CC--CHHHHHHHHHHhCC----CC-hHHhcCHHH
Confidence 99999999997643 235666666654441111000 00 00 11222222222221 00 111111111
Q ss_pred hhhhhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCC-CceEEEEec
Q 024065 164 TIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYP-VNEVMEIKG 242 (273)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~ 242 (273)
.......++........+ .......++||+.++.|++|..+..+....+.+... ..++++++
T Consensus 150 ------------~~l~LPilRAD~~~~e~Y----~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fd- 212 (244)
T COG3208 150 ------------MALFLPILRADFRALESY----RYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFD- 212 (244)
T ss_pred ------------HHHHHHHHHHHHHHhccc----ccCCCCCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEec-
Confidence 111111222111111111 111223449999999999999999999998888876 56999999
Q ss_pred CCccccccChHhHHHHHHHHHhc
Q 024065 243 GDHMAMLSDPQKLCDCLSQISLN 265 (273)
Q Consensus 243 ~gH~~~~~~~~~~~~~i~~fl~~ 265 (273)
+|||...++.+++.+.|.+.+..
T Consensus 213 GgHFfl~~~~~~v~~~i~~~l~~ 235 (244)
T COG3208 213 GGHFFLNQQREEVLARLEQHLAH 235 (244)
T ss_pred CcceehhhhHHHHHHHHHHHhhh
Confidence 99999999999999999999864
No 66
>PRK11460 putative hydrolase; Provisional
Probab=99.87 E-value=9.4e-21 Score=139.26 Aligned_cols=175 Identities=11% Similarity=0.018 Sum_probs=117.3
Q ss_pred CCCCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcC----------CCc---chhhchHHHHHHHH
Q 024065 6 GMEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIE----------DVH---TFHAYSEPLMEVLA 72 (273)
Q Consensus 6 g~~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~----------~~~---~~~~~~~~l~~~l~ 72 (273)
+...++||++||++++...|..+.+.|.+.++.+..++++|...+..... ... .+.+..+.+.++++
T Consensus 13 ~~~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~ 92 (232)
T PRK11460 13 KPAQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVR 92 (232)
T ss_pred CCCCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHH
Confidence 34578899999999999999999999987665566666666543221100 001 11222233333333
Q ss_pred h----C-CCCCcEEEEEechhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhcc
Q 024065 73 S----L-PAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCD 147 (273)
Q Consensus 73 ~----~-~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (273)
. . ...++++++|||+||.+++.++.++|+.+.+++.+++..+. .
T Consensus 93 ~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~---------------~---------------- 141 (232)
T PRK11460 93 YWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYAS---------------L---------------- 141 (232)
T ss_pred HHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccccc---------------c----------------
Confidence 2 2 13468999999999999999999999888877766542100 0
Q ss_pred CCCCCcccccccchhhhhhhhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHH
Q 024065 148 ASNPSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHW 227 (273)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~ 227 (273)
. . ....++|+++++|++|.++|.+..++
T Consensus 142 --~----------~----------------------------------------~~~~~~pvli~hG~~D~vvp~~~~~~ 169 (232)
T PRK11460 142 --P----------E----------------------------------------TAPTATTIHLIHGGEDPVIDVAHAVA 169 (232)
T ss_pred --c----------c----------------------------------------cccCCCcEEEEecCCCCccCHHHHHH
Confidence 0 0 00016799999999999999998887
Q ss_pred HHHhCC----CceEEEEecCCccccccChHhHHHHHHHHH
Q 024065 228 MIQNYP----VNEVMEIKGGDHMAMLSDPQKLCDCLSQIS 263 (273)
Q Consensus 228 ~~~~~~----~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 263 (273)
+.+.+. ++++++++++||.+..+.-+.+.+.|.++|
T Consensus 170 ~~~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l 209 (232)
T PRK11460 170 AQEALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRYTV 209 (232)
T ss_pred HHHHHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHHHc
Confidence 776653 468889999999987554455555555554
No 67
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.87 E-value=2.5e-21 Score=143.30 Aligned_cols=105 Identities=17% Similarity=0.176 Sum_probs=87.5
Q ss_pred CceEEEEccCCCc----hhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhC--CCCCcEEE
Q 024065 9 EKHFVLVHGVNHG----AWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL--PAEEKVIL 82 (273)
Q Consensus 9 ~~~vv~lhG~~~~----~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~l 82 (273)
+++|||+||++.. ...|..+++.|+++||+|+++|+||||.|...... .+++.+++|+..+++.+ .+.+++++
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~-~~~~~~~~Dv~~ai~~L~~~~~~~v~L 103 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAA-ARWDVWKEDVAAAYRWLIEQGHPPVTL 103 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcccc-CCHHHHHHHHHHHHHHHHhcCCCCEEE
Confidence 5789999999864 34577889999999999999999999999765433 47788888877755443 15689999
Q ss_pred EEechhHHHHHHHHHHCCCccceeEEeeccCC
Q 024065 83 VGHSLGGVTLALAADKFPHKISVAVFVTAFMP 114 (273)
Q Consensus 83 vG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 114 (273)
+||||||.+++.++.++|++++++|+++|...
T Consensus 104 vG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 104 WGLRLGALLALDAANPLAAKCNRLVLWQPVVS 135 (266)
T ss_pred EEECHHHHHHHHHHHhCccccceEEEeccccc
Confidence 99999999999999999999999999997643
No 68
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.86 E-value=6.5e-20 Score=132.01 Aligned_cols=112 Identities=18% Similarity=0.161 Sum_probs=99.3
Q ss_pred CCCCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEe
Q 024065 6 GMEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGH 85 (273)
Q Consensus 6 g~~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~ 85 (273)
|+...+||-+||.+++...|+.+.+.|.+.|.|+|.+++||+|.++.++...++-.+....+.++++.+.-.++++++||
T Consensus 32 gs~~gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~~~~i~~gH 111 (297)
T PF06342_consen 32 GSPLGTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIKGKLIFLGH 111 (297)
T ss_pred CCCceeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCCCceEEEEe
Confidence 33345899999999999999999999999999999999999999999988888999999999999999944468889999
Q ss_pred chhHHHHHHHHHHCCCccceeEEeeccCCCCCCC
Q 024065 86 SLGGVTLALAADKFPHKISVAVFVTAFMPDTTHR 119 (273)
Q Consensus 86 S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~ 119 (273)
|.||-.|+.++..+| ..++++++|+.......
T Consensus 112 SrGcenal~la~~~~--~~g~~lin~~G~r~Hkg 143 (297)
T PF06342_consen 112 SRGCENALQLAVTHP--LHGLVLINPPGLRPHKG 143 (297)
T ss_pred ccchHHHHHHHhcCc--cceEEEecCCccccccC
Confidence 999999999999996 67999999986554443
No 69
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.86 E-value=5e-21 Score=140.57 Aligned_cols=238 Identities=16% Similarity=0.074 Sum_probs=138.8
Q ss_pred CCceEEEEccCCCchhh-H-HHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhC---CCCCcEEE
Q 024065 8 EEKHFVLVHGVNHGAWC-W-YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL---PAEEKVIL 82 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~-~-~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~l 82 (273)
.+|.||++||+.+++.. | +.+.+.+.++||.|+++++|||+.+.......++ .-..+|+..+++.+ ....++..
T Consensus 74 ~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh-~G~t~D~~~~l~~l~~~~~~r~~~a 152 (345)
T COG0429 74 KKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYH-SGETEDIRFFLDWLKARFPPRPLYA 152 (345)
T ss_pred CCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceec-ccchhHHHHHHHHHHHhCCCCceEE
Confidence 36899999999665544 4 6788999999999999999999998764433232 23336666666655 47789999
Q ss_pred EEechhHHHHHHHHHHCCC--ccceeEEeeccCCCCCCCcchhHhhhhhhccCCCc-cchhhhhhhccCCCCCccccccc
Q 024065 83 VGHSLGGVTLALAADKFPH--KISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDD-SWLDTQFSQCDASNPSHISMLFG 159 (273)
Q Consensus 83 vG~S~Gg~~a~~~a~~~p~--~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 159 (273)
||.|+||.+...+..+..+ .+.+.+.++.+... .....++..... .+....+...-
T Consensus 153 vG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl---------~~~~~~l~~~~s~~ly~r~l~~~L------------ 211 (345)
T COG0429 153 VGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDL---------EACAYRLDSGFSLRLYSRYLLRNL------------ 211 (345)
T ss_pred EEecccHHHHHHHHHhhccCcccceeeeeeCHHHH---------HHHHHHhcCchhhhhhHHHHHHHH------------
Confidence 9999999544444444332 34555555533211 111111100000 00000000000
Q ss_pred chhhhhhhhc--C-CCchhHHH------hhhhcc-------CCccccccccccCcCCccCcccceEEEEeecCCCCCCHH
Q 024065 160 REFLTIKIYQ--L-CPPEDLEL------AKMLVR-------PGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQ 223 (273)
Q Consensus 160 ~~~~~~~~~~--~-~~~~~~~~------~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~ 223 (273)
.......+.. . .+...... ...+.. ......+.++.......+..|.+|+|+|++.+|++++++
T Consensus 212 ~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~DDP~~~~~ 291 (345)
T COG0429 212 KRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAKDDPFMPPE 291 (345)
T ss_pred HHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccccccceEEEecCCCCCCChh
Confidence 0000000000 0 00000000 000000 011112224455566667888999999999999999998
Q ss_pred HHHHHHH-hCCCceEEEEecCCcccccc----ChH-hHHHHHHHHHhccc
Q 024065 224 FQHWMIQ-NYPVNEVMEIKGGDHMAMLS----DPQ-KLCDCLSQISLNRH 267 (273)
Q Consensus 224 ~~~~~~~-~~~~~~~~~~~~~gH~~~~~----~~~-~~~~~i~~fl~~~~ 267 (273)
...+... ..|++.+.+-+.+||..++. +|. ...+.+.+|++...
T Consensus 292 ~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~ 341 (345)
T COG0429 292 VIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFL 341 (345)
T ss_pred hCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHH
Confidence 8777666 67899999999999998887 343 56678888887654
No 70
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.85 E-value=8e-21 Score=130.42 Aligned_cols=200 Identities=14% Similarity=0.133 Sum_probs=138.7
Q ss_pred CCceEEEEccCCCchhhHHHHHHHHh-hCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhC-----CCCCcEE
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLKARLV-AGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL-----PAEEKVI 81 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~~~l~-~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~-----~~~~~~~ 81 (273)
+.|+++++||..++....-+.+..+- .-+.+|+.+++||+|.|...+.+ +.+.-|-.++++.+ .+..+++
T Consensus 77 S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE----~GL~lDs~avldyl~t~~~~dktkiv 152 (300)
T KOG4391|consen 77 SRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSE----EGLKLDSEAVLDYLMTRPDLDKTKIV 152 (300)
T ss_pred CCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCccc----cceeccHHHHHHHHhcCccCCcceEE
Confidence 68999999999998887766666443 33689999999999999877643 33334444555554 2556899
Q ss_pred EEEechhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCCcccccccch
Q 024065 82 LVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGRE 161 (273)
Q Consensus 82 lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (273)
+.|-|+||.+|+.+|+++.+++.++|+-+.+...+... ... .+.. ...+.+.
T Consensus 153 lfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~-----i~~--------------v~p~---------~~k~i~~ 204 (300)
T KOG4391|consen 153 LFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMA-----IPL--------------VFPF---------PMKYIPL 204 (300)
T ss_pred EEecccCCeeEEEeeccchhheeeeeeechhccchhhh-----hhe--------------eccc---------hhhHHHH
Confidence 99999999999999999999999999988763211100 000 0000 0000011
Q ss_pred hhhhhhhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCCC--ceEEE
Q 024065 162 FLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPV--NEVME 239 (273)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~ 239 (273)
+..+..+. ........++|.|++.|.+|.++|+...+.+.+.+|. .++.+
T Consensus 205 lc~kn~~~----------------------------S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~e 256 (300)
T KOG4391|consen 205 LCYKNKWL----------------------------SYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAE 256 (300)
T ss_pred HHHHhhhc----------------------------chhhhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhhee
Confidence 11110000 0001112388999999999999999999999999874 48999
Q ss_pred EecCCccccccChHhHHHHHHHHHhcccc
Q 024065 240 IKGGDHMAMLSDPQKLCDCLSQISLNRHD 268 (273)
Q Consensus 240 ~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 268 (273)
+|++.|.-.+- .+-..++|.+||.+...
T Consensus 257 FP~gtHNDT~i-~dGYfq~i~dFlaE~~~ 284 (300)
T KOG4391|consen 257 FPDGTHNDTWI-CDGYFQAIEDFLAEVVK 284 (300)
T ss_pred CCCCccCceEE-eccHHHHHHHHHHHhcc
Confidence 99999987765 35667899999987654
No 71
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.83 E-value=3.4e-19 Score=135.73 Aligned_cols=247 Identities=17% Similarity=0.125 Sum_probs=142.1
Q ss_pred CCceEEEEccCCCchhh--HHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhC---CCCCcEEE
Q 024065 8 EEKHFVLVHGVNHGAWC--WYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL---PAEEKVIL 82 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~l 82 (273)
..|+||++||+.+++.. -+.++..+.++||+|++++.||+|.|+-.....++ ..+.+|+.++++++ ....++..
T Consensus 124 ~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~-ag~t~Dl~~~v~~i~~~~P~a~l~a 202 (409)
T KOG1838|consen 124 TDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLFT-AGWTEDLREVVNHIKKRYPQAPLFA 202 (409)
T ss_pred CCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCceee-cCCHHHHHHHHHHHHHhCCCCceEE
Confidence 47999999999655544 36788888899999999999999999876654333 55667777777666 35678999
Q ss_pred EEechhHHHHHHHHHHCCCc---cceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccC-CCCCcccccc
Q 024065 83 VGHSLGGVTLALAADKFPHK---ISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDA-SNPSHISMLF 158 (273)
Q Consensus 83 vG~S~Gg~~a~~~a~~~p~~---v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 158 (273)
+|.||||++...|..+-.++ +.++.+++|.-.. ......... ....+....+...-. .........+
T Consensus 203 vG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~-------~~~~~~~~~--~~~~~y~~~l~~~l~~~~~~~r~~~~ 273 (409)
T KOG1838|consen 203 VGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLL-------AASRSIETP--LYRRFYNRALTLNLKRIVLRHRHTLF 273 (409)
T ss_pred EEecchHHHHHHHhhhccCCCCceeEEEEeccchhh-------hhhhHHhcc--cchHHHHHHHHHhHHHHHhhhhhhhh
Confidence 99999999999998775543 4445555543211 001100000 011111111110000 0000000000
Q ss_pred cchhhhhhhhcCCCchhHHHhhhhccC---CccccccccccCcCCccCcccceEEEEeecCCCCCCHHH-HHHHHHhCCC
Q 024065 159 GREFLTIKIYQLCPPEDLELAKMLVRP---GSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQF-QHWMIQNYPV 234 (273)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~-~~~~~~~~~~ 234 (273)
.+....+..... ....+....+.+. .....+.+...........|++|+|+|++.+|+++|++. -....+..|+
T Consensus 274 ~~~vd~d~~~~~--~SvreFD~~~t~~~~gf~~~deYY~~aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~ 351 (409)
T KOG1838|consen 274 EDPVDFDVILKS--RSVREFDEALTRPMFGFKSVDEYYKKASSSNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPN 351 (409)
T ss_pred hccchhhhhhhc--CcHHHHHhhhhhhhcCCCcHHHHHhhcchhhhcccccccEEEEecCCCCCCCcccCCHHHHhcCCc
Confidence 000000000000 1111111111111 111222344455566677789999999999999999864 3455666788
Q ss_pred ceEEEEecCCccccccC----hHh-HHHHHHHHHhcc
Q 024065 235 NEVMEIKGGDHMAMLSD----PQK-LCDCLSQISLNR 266 (273)
Q Consensus 235 ~~~~~~~~~gH~~~~~~----~~~-~~~~i~~fl~~~ 266 (273)
+-+++-..+||..++|. +.. +.+.+.+|+...
T Consensus 352 v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~ 388 (409)
T KOG1838|consen 352 VLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNA 388 (409)
T ss_pred EEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHH
Confidence 88889999999999886 222 333367776654
No 72
>PLN02442 S-formylglutathione hydrolase
Probab=99.83 E-value=1.8e-18 Score=131.10 Aligned_cols=106 Identities=16% Similarity=0.159 Sum_probs=76.0
Q ss_pred CCCceEEEEccCCCchhhHHH---HHHHHhhCCcEEEEeccCCCCC-----CCC-----Cc--------C-----C--Cc
Q 024065 7 MEEKHFVLVHGVNHGAWCWYK---LKARLVAGGHRVTAVDLAASGI-----NMK-----RI--------E-----D--VH 58 (273)
Q Consensus 7 ~~~~~vv~lhG~~~~~~~~~~---~~~~l~~~g~~vi~~d~~G~G~-----s~~-----~~--------~-----~--~~ 58 (273)
...|+|+++||++++...|.. +...+...|+.|+.+|..++|. +.. .. . . .+
T Consensus 45 ~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (283)
T PLN02442 45 GKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDY 124 (283)
T ss_pred CCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhh
Confidence 457899999999988877743 4456667799999999887762 110 00 0 0 01
Q ss_pred chhhchHHHHHHHHhCCCCCcEEEEEechhHHHHHHHHHHCCCccceeEEeeccC
Q 024065 59 TFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFM 113 (273)
Q Consensus 59 ~~~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~ 113 (273)
-.+++.+.+....+.+ +.++++++||||||..|+.++.++|+++++++.+++..
T Consensus 125 ~~~~l~~~i~~~~~~~-~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 178 (283)
T PLN02442 125 VVKELPKLLSDNFDQL-DTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIA 178 (283)
T ss_pred HHHHHHHHHHHHHHhc-CCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCcc
Confidence 1233333444444455 67889999999999999999999999999999988763
No 73
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.82 E-value=5e-19 Score=129.28 Aligned_cols=194 Identities=14% Similarity=0.058 Sum_probs=115.2
Q ss_pred HHHHHHHHhhCCcEEEEeccCCCCCCCCCcC---CCcchhhchHHHHHHHHhC-----CCCCcEEEEEechhHHHHHHHH
Q 024065 25 WYKLKARLVAGGHRVTAVDLAASGINMKRIE---DVHTFHAYSEPLMEVLASL-----PAEEKVILVGHSLGGVTLALAA 96 (273)
Q Consensus 25 ~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~---~~~~~~~~~~~l~~~l~~~-----~~~~~~~lvG~S~Gg~~a~~~a 96 (273)
|......|+++||.|+.+|+||.+....... ....-...++|+.+.++.+ .+.+++.++|+|+||.+++.++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 4456678889999999999999875432211 1011123345555555444 1457899999999999999999
Q ss_pred HHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCCcccccccchhhhhhhhcCCCchhH
Q 024065 97 DKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQLCPPEDL 176 (273)
Q Consensus 97 ~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (273)
.++|+++++++..++............. + . .......-.........
T Consensus 83 ~~~~~~f~a~v~~~g~~d~~~~~~~~~~--~------------~-------------------~~~~~~~~~~~~~~~~~ 129 (213)
T PF00326_consen 83 TQHPDRFKAAVAGAGVSDLFSYYGTTDI--Y------------T-------------------KAEYLEYGDPWDNPEFY 129 (213)
T ss_dssp HHTCCGSSEEEEESE-SSTTCSBHHTCC--H------------H-------------------HGHHHHHSSTTTSHHHH
T ss_pred cccceeeeeeeccceecchhcccccccc--c------------c-------------------cccccccCccchhhhhh
Confidence 9999999999988876432211100000 0 0 00000000000001111
Q ss_pred HHhhhhccCCccccccccccCcCCccCc--ccceEEEEeecCCCCCCHHHHHHHHHhC----CCceEEEEecCCccccc-
Q 024065 177 ELAKMLVRPGSMFIDNLSKESKFSDEGY--GSVKRVYLVCEEDIGLPKQFQHWMIQNY----PVNEVMEIKGGDHMAML- 249 (273)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Pvl~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~- 249 (273)
....... .... +++|+|+++|++|..+|++.+..+.+.+ .+++++++|++||.+..
T Consensus 130 ~~~s~~~-----------------~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~ 192 (213)
T PF00326_consen 130 RELSPIS-----------------PADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNP 192 (213)
T ss_dssp HHHHHGG-----------------GGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSH
T ss_pred hhhcccc-----------------ccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCc
Confidence 1110000 0011 3899999999999999998777766554 35799999999996553
Q ss_pred cChHhHHHHHHHHHhcccc
Q 024065 250 SDPQKLCDCLSQISLNRHD 268 (273)
Q Consensus 250 ~~~~~~~~~i~~fl~~~~~ 268 (273)
+...+..+.+.+|+++...
T Consensus 193 ~~~~~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 193 ENRRDWYERILDFFDKYLK 211 (213)
T ss_dssp HHHHHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHHHHHHcC
Confidence 3446788999999987654
No 74
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.81 E-value=6.8e-18 Score=127.72 Aligned_cols=106 Identities=17% Similarity=0.173 Sum_probs=77.3
Q ss_pred CCceEEEEccCCCchhhHHHH--HHHH-hhCCcEEEEecc--CCCCCCCCCc-------------------CCCcchhh-
Q 024065 8 EEKHFVLVHGVNHGAWCWYKL--KARL-VAGGHRVTAVDL--AASGINMKRI-------------------EDVHTFHA- 62 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~--~~~l-~~~g~~vi~~d~--~G~G~s~~~~-------------------~~~~~~~~- 62 (273)
..|+|+++||++++...|... ...+ .+.|+.|+++|. +|+|.+.... ...++..+
T Consensus 41 ~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~ 120 (275)
T TIGR02821 41 PVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSY 120 (275)
T ss_pred CCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHH
Confidence 478999999999999888532 3344 446899999998 5555432110 00122233
Q ss_pred chHHHHHHHHhC--CCCCcEEEEEechhHHHHHHHHHHCCCccceeEEeeccC
Q 024065 63 YSEPLMEVLASL--PAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFM 113 (273)
Q Consensus 63 ~~~~l~~~l~~~--~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~ 113 (273)
.++++..+++.. .+.++++++||||||.+++.++.++|+.+++++++++..
T Consensus 121 ~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 173 (275)
T TIGR02821 121 IVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIV 173 (275)
T ss_pred HHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCcc
Confidence 357777777762 155789999999999999999999999999999988763
No 75
>PLN00021 chlorophyllase
Probab=99.81 E-value=3.1e-18 Score=130.44 Aligned_cols=104 Identities=22% Similarity=0.148 Sum_probs=76.3
Q ss_pred CCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhC------CCCCcEE
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL------PAEEKVI 81 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~------~~~~~~~ 81 (273)
..|+|||+||++.+...|..+++.|+++||.|+++|++|++.+.... ...+..+..+.+.+.++.+ .+.++++
T Consensus 51 ~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~~~-~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~ 129 (313)
T PLN00021 51 TYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDGTD-EIKDAAAVINWLSSGLAAVLPEGVRPDLSKLA 129 (313)
T ss_pred CCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCchh-hHHHHHHHHHHHHhhhhhhcccccccChhheE
Confidence 47899999999999999999999999999999999999875432111 1112222233333322221 1347899
Q ss_pred EEEechhHHHHHHHHHHCCC-----ccceeEEeecc
Q 024065 82 LVGHSLGGVTLALAADKFPH-----KISVAVFVTAF 112 (273)
Q Consensus 82 lvG~S~Gg~~a~~~a~~~p~-----~v~~lil~~~~ 112 (273)
++|||+||.+++.+|.++++ +++++|+++|.
T Consensus 130 l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv 165 (313)
T PLN00021 130 LAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPV 165 (313)
T ss_pred EEEECcchHHHHHHHhhccccccccceeeEEeeccc
Confidence 99999999999999998874 57888888875
No 76
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.80 E-value=9.8e-19 Score=130.76 Aligned_cols=254 Identities=13% Similarity=0.104 Sum_probs=150.5
Q ss_pred CceEEEEccCCCchhhHHH-------HHHHHh-------hCCcEEEEeccCCCC-CCCCCcC------------CCcchh
Q 024065 9 EKHFVLVHGVNHGAWCWYK-------LKARLV-------AGGHRVTAVDLAASG-INMKRIE------------DVHTFH 61 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~~~-------~~~~l~-------~~g~~vi~~d~~G~G-~s~~~~~------------~~~~~~ 61 (273)
...|+++|++.++...... +.+.+. ...|.||+.|..|.+ .|+.|.+ ...++.
T Consensus 51 ~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti~ 130 (368)
T COG2021 51 DNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVITIR 130 (368)
T ss_pred CceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCcccHH
Confidence 5689999999986654331 333332 234999999999865 3333221 246888
Q ss_pred hchHHHHHHHHhCCCCCcEE-EEEechhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchh
Q 024065 62 AYSEPLMEVLASLPAEEKVI-LVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLD 140 (273)
Q Consensus 62 ~~~~~l~~~l~~~~~~~~~~-lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (273)
|++..-..+++++ +++++. +||-||||+.|++++..||++|.++|.+++........ ..+....+..-...+.|..
T Consensus 131 D~V~aq~~ll~~L-GI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~--ia~~~~~r~AI~~DP~~n~ 207 (368)
T COG2021 131 DMVRAQRLLLDAL-GIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQN--IAFNEVQRQAIEADPDWNG 207 (368)
T ss_pred HHHHHHHHHHHhc-CcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHH--HHHHHHHHHHHHhCCCccC
Confidence 9998888999999 999988 88999999999999999999999999998754322111 1122211111111222211
Q ss_pred hhhhhcc-CC------CCCcccccccchhhhhhhhcCC-----C----chhHHHh--------hhhccCCcc--cccccc
Q 024065 141 TQFSQCD-AS------NPSHISMLFGREFLTIKIYQLC-----P----PEDLELA--------KMLVRPGSM--FIDNLS 194 (273)
Q Consensus 141 ~~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~-----~----~~~~~~~--------~~~~~~~~~--~~~~~~ 194 (273)
-...... +. .........++..+.+.+.... . ....+.. ...+.++.. ....++
T Consensus 208 G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~~rfDaNsYL~lt~ald 287 (368)
T COG2021 208 GDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFVARFDANSYLYLTRALD 287 (368)
T ss_pred CCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHHHhccCcchHHHHHHHHH
Confidence 1000000 00 0000011112222222222100 0 0000000 000001100 011122
Q ss_pred ccCcCC-------ccCcccceEEEEeecCCCCCCHHHHHHHHHhCCCce-EEEEe-cCCccccccChHhHHHHHHHHHhc
Q 024065 195 KESKFS-------DEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNE-VMEIK-GGDHMAMLSDPQKLCDCLSQISLN 265 (273)
Q Consensus 195 ~~~~~~-------~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~-~~~~~-~~gH~~~~~~~~~~~~~i~~fl~~ 265 (273)
..+... .+..+++|+|++.-+.|..+|++..+.+.+.++.+. +++++ ..||..++...+.+...|..||+.
T Consensus 288 ~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i~S~~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 288 YHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGALREIDSPYGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred hcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCceEEecCCCCchhhhcchhhhhHHHHHHhhc
Confidence 222221 156679999999999999999999999999998776 76665 679999999999999999999975
No 77
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.79 E-value=3.6e-18 Score=124.71 Aligned_cols=180 Identities=17% Similarity=0.207 Sum_probs=106.2
Q ss_pred cCCCCceEEEEccCCCchhhHHHHHH-HHhhCCcEEEEeccCC------CCCC--CC------CcC---CCcchhhchHH
Q 024065 5 VGMEEKHFVLVHGVNHGAWCWYKLKA-RLVAGGHRVTAVDLAA------SGIN--MK------RIE---DVHTFHAYSEP 66 (273)
Q Consensus 5 ~g~~~~~vv~lhG~~~~~~~~~~~~~-~l~~~g~~vi~~d~~G------~G~s--~~------~~~---~~~~~~~~~~~ 66 (273)
.+...++||++||+|++...|..+.. .+.....+++++.-|- .|.. .. ... ....+.+.++.
T Consensus 10 ~~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~ 89 (216)
T PF02230_consen 10 KGKAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAER 89 (216)
T ss_dssp SST-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHH
T ss_pred CCCCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHH
Confidence 45568899999999999977776655 2222346677665431 1220 00 010 11233334444
Q ss_pred HHHHHHhC----CCCCcEEEEEechhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhh
Q 024065 67 LMEVLASL----PAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQ 142 (273)
Q Consensus 67 l~~~l~~~----~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (273)
+.++++.. ...+++++.|+|.||++|+.++.++|+.+.++|.+++..+...... .
T Consensus 90 l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~~-----~---------------- 148 (216)
T PF02230_consen 90 LDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESELE-----D---------------- 148 (216)
T ss_dssp HHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCCH-----C----------------
T ss_pred HHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccccccc-----c----------------
Confidence 55555432 2557899999999999999999999999999999998643211100 0
Q ss_pred hhhccCCCCCcccccccchhhhhhhhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCH
Q 024065 143 FSQCDASNPSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPK 222 (273)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~ 222 (273)
. . ....++|+++++|++|+++|.
T Consensus 149 -------------------------------------------------~---~-----~~~~~~pi~~~hG~~D~vvp~ 171 (216)
T PF02230_consen 149 -------------------------------------------------R---P-----EALAKTPILIIHGDEDPVVPF 171 (216)
T ss_dssp -------------------------------------------------C---H-----CCCCTS-EEEEEETT-SSSTH
T ss_pred -------------------------------------------------c---c-----cccCCCcEEEEecCCCCcccH
Confidence 0 0 000167999999999999998
Q ss_pred HHHHHHHHhC----CCceEEEEecCCccccccChHhHHHHHHHHHhcc
Q 024065 223 QFQHWMIQNY----PVNEVMEIKGGDHMAMLSDPQKLCDCLSQISLNR 266 (273)
Q Consensus 223 ~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 266 (273)
+..+...+.+ .+++++.++++||... .+..+.+.+||++.
T Consensus 172 ~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~----~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 172 EWAEKTAEFLKAAGANVEFHEYPGGGHEIS----PEELRDLREFLEKH 215 (216)
T ss_dssp HHHHHHHHHHHCTT-GEEEEEETT-SSS------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEEEcCCCCCCCC----HHHHHHHHHHHhhh
Confidence 8776665554 4579999999999875 34446788888753
No 78
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.78 E-value=9.4e-18 Score=124.14 Aligned_cols=221 Identities=15% Similarity=0.144 Sum_probs=133.1
Q ss_pred ceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEechhH
Q 024065 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGG 89 (273)
Q Consensus 10 ~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg 89 (273)
++|+|+||.+++...|..+++.|..+.+.|+.++.+|.+....+ ..+++++++...+.|......+++.|+|||+||
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~~~---~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg 77 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDEPP---PDSIEELASRYAEAIRARQPEGPYVLAGWSFGG 77 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTSHE---ESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCCCC---CCCHHHHHHHHHHHhhhhCCCCCeeehccCccH
Confidence 58999999999999999999999864489999999999833322 259999999998888776344599999999999
Q ss_pred HHHHHHHHHC---CCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCCcccccccchhhhhh
Q 024065 90 VTLALAADKF---PHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIK 166 (273)
Q Consensus 90 ~~a~~~a~~~---p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (273)
.+|+++|.+- ...+..++++++..+.............. ........... . ....
T Consensus 78 ~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~~~~~~~~~--------~~~~~~~~~~~-------~---~~~~---- 135 (229)
T PF00975_consen 78 ILAFEMARQLEEAGEEVSRLILIDSPPPSIKERPRSREPSDE--------QFIEELRRIGG-------T---PDAS---- 135 (229)
T ss_dssp HHHHHHHHHHHHTT-SESEEEEESCSSTTCHSCHHHHHCHHH--------HHHHHHHHHCH-------H---HHHH----
T ss_pred HHHHHHHHHHHHhhhccCceEEecCCCCCcccchhhhhhhHH--------HHHHHHHHhcC-------C---chhh----
Confidence 9999998753 45699999999765433111111000000 00000000000 0 0000
Q ss_pred hhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHH---HHHHHHHhCCC-ceEEEEec
Q 024065 167 IYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQ---FQHWMIQNYPV-NEVMEIKG 242 (273)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~---~~~~~~~~~~~-~~~~~~~~ 242 (273)
.........+..........+.... ........+|.++.....|+..... ....+.+..++ .+++.++
T Consensus 136 ------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~v~- 207 (229)
T PF00975_consen 136 ------LEDEELLARLLRALRDDFQALENYS-IRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTSGDVEVHDVP- 207 (229)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHTCS--TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBSSSEEEEEES-
T ss_pred ------hcCHHHHHHHHHHHHHHHHHHhhcc-CCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcCCCcEEEEEc-
Confidence 0000000000000000000000000 0001111568899999999888766 33446666654 5788888
Q ss_pred CCcccccc-ChHhHHHHHHHHH
Q 024065 243 GDHMAMLS-DPQKLCDCLSQIS 263 (273)
Q Consensus 243 ~gH~~~~~-~~~~~~~~i~~fl 263 (273)
++|+.++. +..++.+.|.++|
T Consensus 208 G~H~~~l~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 208 GDHFSMLKPHVAEIAEKIAEWL 229 (229)
T ss_dssp SETTGHHSTTHHHHHHHHHHHH
T ss_pred CCCcEecchHHHHHHHHHhccC
Confidence 89999997 6688888888875
No 79
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.78 E-value=2.3e-17 Score=131.70 Aligned_cols=235 Identities=12% Similarity=0.086 Sum_probs=139.9
Q ss_pred CCceEEEEccCCCchhhH-----HHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhC---CCCCc
Q 024065 8 EEKHFVLVHGVNHGAWCW-----YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL---PAEEK 79 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~-----~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~ 79 (273)
.++|||+++++-...+.| +.+++.|.++||+|+++|+++-+.+. ...+++++++.+.+.++.+ .+.++
T Consensus 214 ~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~----r~~~ldDYv~~i~~Ald~V~~~tG~~~ 289 (560)
T TIGR01839 214 HARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH----REWGLSTYVDALKEAVDAVRAITGSRD 289 (560)
T ss_pred CCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhh----cCCCHHHHHHHHHHHHHHHHHhcCCCC
Confidence 367999999998777767 58999999999999999999866554 2357888887777777665 46789
Q ss_pred EEEEEechhHHHHHH----HHHHCCC-ccceeEEeeccCCCCCCCcchh------H---hhhhhhccCCCccchhhhhhh
Q 024065 80 VILVGHSLGGVTLAL----AADKFPH-KISVAVFVTAFMPDTTHRPSFV------L---EQYSEKMGKEDDSWLDTQFSQ 145 (273)
Q Consensus 80 ~~lvG~S~Gg~~a~~----~a~~~p~-~v~~lil~~~~~~~~~~~~~~~------~---~~~~~~~~~~~~~~~~~~~~~ 145 (273)
+.++|+|+||.++.. +++++++ +|++++++.++........... . +.............+...+..
T Consensus 290 vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~~~G~lpg~~ma~~F~~ 369 (560)
T TIGR01839 290 LNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSYQAGVLDGSEMAKVFAW 369 (560)
T ss_pred eeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChHHHHHHHHHHHhcCCcCHHHHHHHHHh
Confidence 999999999999886 7888886 8999999998765332211110 1 111111111222223333332
Q ss_pred ccCCCCCcccccccchh-------hh--hhhhcCCCchhHHH---hhhhccCCcccc-ccccccCcCCccCcccceEEEE
Q 024065 146 CDASNPSHISMLFGREF-------LT--IKIYQLCPPEDLEL---AKMLVRPGSMFI-DNLSKESKFSDEGYGSVKRVYL 212 (273)
Q Consensus 146 ~~~~~~~~~~~~~~~~~-------~~--~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Pvl~i 212 (273)
..+ ... ....+...+ .. ..+......-.... ...++....... ..+.-.....++..|+||++++
T Consensus 370 LrP-~dl-iw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg~~~~e~l~ly~~N~L~~pG~l~v~G~~idL~~I~~Pvl~v 447 (560)
T TIGR01839 370 MRP-NDL-IWNYWVNNYLLGNEPPAFDILYWNNDTTRLPAAFHGDLLDMFKSNPLTRPDALEVCGTPIDLKKVKCDSFSV 447 (560)
T ss_pred cCc-hhh-hHHHHHHHhhcCCCcchhhHHHHhCcCccchHHHHHHHHHHHhcCCCCCCCCEEECCEEechhcCCCCeEEE
Confidence 221 000 000000000 00 01111111110011 111221111111 2222233344577889999999
Q ss_pred eecCCCCCCHHHHHHHHHhCCC-ceEEEEecCCccccc
Q 024065 213 VCEEDIGLPKQFQHWMIQNYPV-NEVMEIKGGDHMAML 249 (273)
Q Consensus 213 ~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~ 249 (273)
.|+.|.++|++.+..+.+.+.+ .+++..+ +||..-.
T Consensus 448 a~~~DHIvPw~s~~~~~~l~gs~~~fvl~~-gGHIggi 484 (560)
T TIGR01839 448 AGTNDHITPWDAVYRSALLLGGKRRFVLSN-SGHIQSI 484 (560)
T ss_pred ecCcCCcCCHHHHHHHHHHcCCCeEEEecC-CCccccc
Confidence 9999999999999999888764 4555555 9997544
No 80
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.77 E-value=2.2e-17 Score=120.29 Aligned_cols=106 Identities=15% Similarity=0.142 Sum_probs=75.0
Q ss_pred CCceEEEEccCCCchhhHH---HHHHHHhhCCcEEEEeccCCCCCCCCCcC-----CCcchhhchHHHHHHHHhC-----
Q 024065 8 EEKHFVLVHGVNHGAWCWY---KLKARLVAGGHRVTAVDLAASGINMKRIE-----DVHTFHAYSEPLMEVLASL----- 74 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~---~~~~~l~~~g~~vi~~d~~G~G~s~~~~~-----~~~~~~~~~~~l~~~l~~~----- 74 (273)
..|.||++||.+++...+. .+...+.+.||.|+++|++|++.+..... ..........++.++++.+
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 91 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYS 91 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcC
Confidence 4789999999998887775 35555556799999999999875432110 0000112233344444333
Q ss_pred CCCCcEEEEEechhHHHHHHHHHHCCCccceeEEeeccC
Q 024065 75 PAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFM 113 (273)
Q Consensus 75 ~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~ 113 (273)
.+.++++|+|||+||.+++.++.++|+.+.+++.+++..
T Consensus 92 id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 92 IDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred cChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 134689999999999999999999999999999888753
No 81
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.77 E-value=6.1e-18 Score=132.57 Aligned_cols=108 Identities=20% Similarity=0.222 Sum_probs=84.3
Q ss_pred CCceEEEEccCCCch--hhHHH-HHHHHhh--CCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhC-----CCC
Q 024065 8 EEKHFVLVHGVNHGA--WCWYK-LKARLVA--GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL-----PAE 77 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~--~~~~~-~~~~l~~--~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~-----~~~ 77 (273)
++|++|++||++.+. ..|.. +.+.|.. ..++||++|++|+|.|..+... .....+++++.++++.+ .+.
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~-~~t~~vg~~la~lI~~L~~~~gl~l 118 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSA-AYTKLVGKDVAKFVNWMQEEFNYPW 118 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCcccc-ccHHHHHHHHHHHHHHHHHhhCCCC
Confidence 589999999998754 45764 5555542 2499999999999988765433 23456667777777654 146
Q ss_pred CcEEEEEechhHHHHHHHHHHCCCccceeEEeeccCCCC
Q 024065 78 EKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDT 116 (273)
Q Consensus 78 ~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~ 116 (273)
++++||||||||.+|..++.++|++|.++++++|..|..
T Consensus 119 ~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP~F 157 (442)
T TIGR03230 119 DNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGPTF 157 (442)
T ss_pred CcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCCcc
Confidence 899999999999999999999999999999999986644
No 82
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.76 E-value=2.1e-17 Score=137.91 Aligned_cols=208 Identities=16% Similarity=0.070 Sum_probs=131.0
Q ss_pred ceEEEEccCCCchhh--HHHHHHHHhhCCcEEEEeccCCCCCCCCC-----c--CCCcchhhchHHHHHHHHhCC--CCC
Q 024065 10 KHFVLVHGVNHGAWC--WYKLKARLVAGGHRVTAVDLAASGINMKR-----I--EDVHTFHAYSEPLMEVLASLP--AEE 78 (273)
Q Consensus 10 ~~vv~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~d~~G~G~s~~~-----~--~~~~~~~~~~~~l~~~l~~~~--~~~ 78 (273)
|+||++||.+..... |....+.|+.+||.|+.+++||.+.-... . ......+|+.+.+. ++...+ +.+
T Consensus 395 P~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ 473 (620)
T COG1506 395 PLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPE 473 (620)
T ss_pred CEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHH-HHHhCCCcChH
Confidence 899999999765555 66788899999999999999975442211 1 11234555555555 444442 335
Q ss_pred cEEEEEechhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCCcccccc
Q 024065 79 KVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLF 158 (273)
Q Consensus 79 ~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (273)
++.+.|||+||.+++..+.+.| .+++.+...+......... .. ...+.......
T Consensus 474 ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~~-----~~-------~~~~~~~~~~~------------- 527 (620)
T COG1506 474 RIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYFG-----ES-------TEGLRFDPEEN------------- 527 (620)
T ss_pred HeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhcc-----cc-------chhhcCCHHHh-------------
Confidence 8999999999999999998888 6777665555322110000 00 00000000000
Q ss_pred cchhhhhhhhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhC----CC
Q 024065 159 GREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNY----PV 234 (273)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~----~~ 234 (273)
...... . ...+....+......+++|+|+|||++|..+|.+.+..+.+.+ .+
T Consensus 528 ---------~~~~~~-~--------------~~~~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~ 583 (620)
T COG1506 528 ---------GGGPPE-D--------------REKYEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKP 583 (620)
T ss_pred ---------CCCccc-C--------------hHHHHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCce
Confidence 000000 0 0011112222334455999999999999999999887776665 35
Q ss_pred ceEEEEecCCccccc-cChHhHHHHHHHHHhcccc
Q 024065 235 NEVMEIKGGDHMAML-SDPQKLCDCLSQISLNRHD 268 (273)
Q Consensus 235 ~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~~~~ 268 (273)
++++++|+.+|.+.- ++...+.+.+.+|+++...
T Consensus 584 ~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~~ 618 (620)
T COG1506 584 VELVVFPDEGHGFSRPENRVKVLKEILDWFKRHLK 618 (620)
T ss_pred EEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHHhc
Confidence 799999999998877 4456677888888887653
No 83
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.76 E-value=3.9e-17 Score=119.35 Aligned_cols=240 Identities=11% Similarity=0.089 Sum_probs=130.2
Q ss_pred CCceEEEEccCCCchhh-HHHH-----HHHHhhCCcEEEEeccCCCCCCCCC--cC-CCcchhhchHHHHHHHHhCCCCC
Q 024065 8 EEKHFVLVHGVNHGAWC-WYKL-----KARLVAGGHRVTAVDLAASGINMKR--IE-DVHTFHAYSEPLMEVLASLPAEE 78 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~-~~~~-----~~~l~~~g~~vi~~d~~G~G~s~~~--~~-~~~~~~~~~~~l~~~l~~~~~~~ 78 (273)
++|++|=.|-.|.+... |..+ .+.+.++ |.++-+|.||+..-... .+ ...|++++++++.++++++ +.+
T Consensus 22 ~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~-f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f-~lk 99 (283)
T PF03096_consen 22 NKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQN-FCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHF-GLK 99 (283)
T ss_dssp TS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTT-SEEEEEE-TTTSTT-----TT-----HHHHHCTHHHHHHHH-T--
T ss_pred CCceEEEeccccccchHHHHHHhcchhHHHHhhc-eEEEEEeCCCCCCCcccccccccccCHHHHHHHHHHHHHhC-Ccc
Confidence 48999999999988877 6554 3456665 99999999999765433 22 3469999999999999999 999
Q ss_pred cEEEEEechhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCCcccccc
Q 024065 79 KVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLF 158 (273)
Q Consensus 79 ~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (273)
.++-+|--.||.|..++|..+|++|.++||+++.....+.. .+...++.... .....+.... ...+
T Consensus 100 ~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~-Ew~~~K~~~~~-L~~~gmt~~~------------~d~L 165 (283)
T PF03096_consen 100 SVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWM-EWFYQKLSSWL-LYSYGMTSSV------------KDYL 165 (283)
T ss_dssp -EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HH-HHHHHHHH--------CTTS-H------------HHHH
T ss_pred EEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHH-HHHHHHHhccc-ccccccccch------------HHhh
Confidence 99999999999999999999999999999999864322211 11111111100 0000111100 0000
Q ss_pred cchhhhhhhhcCCCchhHHHhhhhccC-----CccccccccccCcCCc-cCcccceEEEEeecCCCCCCHHHHHHHHHhC
Q 024065 159 GREFLTIKIYQLCPPEDLELAKMLVRP-----GSMFIDNLSKESKFSD-EGYGSVKRVYLVCEEDIGLPKQFQHWMIQNY 232 (273)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~ 232 (273)
....+.+.......+........+... ...++..+....++.. .....||+|++.|+..+.. +.+..+..++
T Consensus 166 l~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~~--~~vv~~ns~L 243 (283)
T PF03096_consen 166 LWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPHV--DDVVEMNSKL 243 (283)
T ss_dssp HHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTTH--HHHHHHHHHS
T ss_pred hhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcch--hhHHHHHhhc
Confidence 011111111111111111111111111 1122233222222222 3334799999999998764 5556677766
Q ss_pred C--CceEEEEecCCccccccChHhHHHHHHHHHhc
Q 024065 233 P--VNEVMEIKGGDHMAMLSDPQKLCDCLSQISLN 265 (273)
Q Consensus 233 ~--~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 265 (273)
. +.++..+++||=.+..|+|+++++.+.-||+-
T Consensus 244 dp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG 278 (283)
T PF03096_consen 244 DPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQG 278 (283)
T ss_dssp -CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHH
T ss_pred CcccceEEEecccCCcccccCcHHHHHHHHHHHcc
Confidence 3 45899999999999999999999999999974
No 84
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.76 E-value=1.1e-16 Score=124.12 Aligned_cols=247 Identities=11% Similarity=0.046 Sum_probs=148.7
Q ss_pred CceEEEEccCCCchhhH-HHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEech
Q 024065 9 EKHFVLVHGVNHGAWCW-YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSL 87 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~-~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~ 87 (273)
.|+||++..+.+..... +.+++.|.+ |+.|+..|+..-+..+... ..++++++++-+.++++++ +.+ ++++|+|+
T Consensus 102 ~~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~-~~f~ldDYi~~l~~~i~~~-G~~-v~l~GvCq 177 (406)
T TIGR01849 102 GPAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPLSA-GKFDLEDYIDYLIEFIRFL-GPD-IHVIAVCQ 177 (406)
T ss_pred CCcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchhc-CCCCHHHHHHHHHHHHHHh-CCC-CcEEEEch
Confidence 37999999998666664 678999998 9999999998766443333 3379999999999999999 766 99999999
Q ss_pred hHHHHHHHHHHC-----CCccceeEEeeccCCCCCCCcchhHhhh---------hhhc----cC--------CCccc-hh
Q 024065 88 GGVTLALAADKF-----PHKISVAVFVTAFMPDTTHRPSFVLEQY---------SEKM----GK--------EDDSW-LD 140 (273)
Q Consensus 88 Gg~~a~~~a~~~-----p~~v~~lil~~~~~~~~~~~~~~~~~~~---------~~~~----~~--------~~~~~-~~ 140 (273)
||..++.+++.+ |.++++++++++++.....+. ....+ .+.. .. ....+ ..
T Consensus 178 gG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~--~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~ 255 (406)
T TIGR01849 178 PAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPT--VVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQL 255 (406)
T ss_pred hhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCc--hHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHH
Confidence 999977666554 667999999998765433211 11111 1100 00 00111 11
Q ss_pred hhhhhccCCCCCcccccccchhhhhhhhcCCC--------------------chhHHHhhhhccCCccccccccccCcCC
Q 024065 141 TQFSQCDASNPSHISMLFGREFLTIKIYQLCP--------------------PEDLELAKMLVRPGSMFIDNLSKESKFS 200 (273)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (273)
..+.... +........+++......... +...+.....+.........+.-.....
T Consensus 256 ~~F~~mn----p~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~V 331 (406)
T TIGR01849 256 AGFISMN----LDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKRV 331 (406)
T ss_pred HHHHHcC----cchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccCCcEEECCEEe
Confidence 1111000 000000001111111100000 0011111122222211122222233334
Q ss_pred ccCccc-ceEEEEeecCCCCCCHHHHHHHHHhC---CC--ceEEEEecCCccccccC---hHhHHHHHHHHHhc
Q 024065 201 DEGYGS-VKRVYLVCEEDIGLPKQFQHWMIQNY---PV--NEVMEIKGGDHMAMLSD---PQKLCDCLSQISLN 265 (273)
Q Consensus 201 ~~~~~~-~Pvl~i~g~~D~~~~~~~~~~~~~~~---~~--~~~~~~~~~gH~~~~~~---~~~~~~~i~~fl~~ 265 (273)
++..|+ +|+|.+.|++|.++|+..++.+.+.+ +. .+.+..+++||+..+.- ++++.-.|.+||.+
T Consensus 332 dl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 332 DPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred cHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 456677 99999999999999999998888874 42 35667778999887753 37888999999975
No 85
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.75 E-value=1.1e-16 Score=117.31 Aligned_cols=178 Identities=20% Similarity=0.113 Sum_probs=112.6
Q ss_pred CCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCC-CCCCcCC-Cc--------chhhchHHHHHHHHhC---
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGI-NMKRIED-VH--------TFHAYSEPLMEVLASL--- 74 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~-s~~~~~~-~~--------~~~~~~~~l~~~l~~~--- 74 (273)
+.|.||++|++.+-....+.+++.|+++||.|+++|+-+-.. ....... .. ..+...+++.+.++.+
T Consensus 13 ~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~ 92 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQ 92 (218)
T ss_dssp SEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCT
T ss_pred CCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhc
Confidence 489999999998877777889999999999999999864333 1111110 00 1234556665556555
Q ss_pred C--CCCcEEEEEechhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCC
Q 024065 75 P--AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPS 152 (273)
Q Consensus 75 ~--~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (273)
. ..+++.++|+|+||.+++.++.+. ..+++.+..-|... .. ...
T Consensus 93 ~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~-----~~---~~~------------------------- 138 (218)
T PF01738_consen 93 PEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSP-----PP---PPL------------------------- 138 (218)
T ss_dssp TTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSS-----GG---GHH-------------------------
T ss_pred cccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCC-----CC---cch-------------------------
Confidence 1 246899999999999999999877 57888887665100 00 000
Q ss_pred cccccccchhhhhhhhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhC
Q 024065 153 HISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNY 232 (273)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~ 232 (273)
. ....+++|+++++|++|+.++.+..+.+.+.+
T Consensus 139 ------------------------~-----------------------~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l 171 (218)
T PF01738_consen 139 ------------------------E-----------------------DAPKIKAPVLILFGENDPFFPPEEVEALEEAL 171 (218)
T ss_dssp ------------------------H-----------------------HGGG--S-EEEEEETT-TTS-HHHHHHHHHHH
T ss_pred ------------------------h-----------------------hhcccCCCEeecCccCCCCCChHHHHHHHHHH
Confidence 0 01112889999999999999998766665554
Q ss_pred ----CCceEEEEecCCccccccCh--------HhHHHHHHHHHhcc
Q 024065 233 ----PVNEVMEIKGGDHMAMLSDP--------QKLCDCLSQISLNR 266 (273)
Q Consensus 233 ----~~~~~~~~~~~gH~~~~~~~--------~~~~~~i~~fl~~~ 266 (273)
...++++++|++|.+..... ++..+.+.+||++.
T Consensus 172 ~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 172 KAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp HCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred HhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 56799999999998876432 34556777777654
No 86
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.75 E-value=2.8e-17 Score=113.98 Aligned_cols=158 Identities=23% Similarity=0.307 Sum_probs=104.3
Q ss_pred EEEEccCCCchhh-HHH-HHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEechhH
Q 024065 12 FVLVHGVNHGAWC-WYK-LKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGG 89 (273)
Q Consensus 12 vv~lhG~~~~~~~-~~~-~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg 89 (273)
|+++||++++... |.+ +.+.|... ++|-.+++ ...+.+++...+.+.+..+ . +++++||||+|+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~-----------~~P~~~~W~~~l~~~i~~~-~-~~~ilVaHSLGc 66 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW-----------DNPDLDEWVQALDQAIDAI-D-EPTILVAHSLGC 66 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC-------------TS--HHHHHHHHHHCCHC--T-TTEEEEEETHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc-----------CCCCHHHHHHHHHHHHhhc-C-CCeEEEEeCHHH
Confidence 6899999877654 765 45566665 78877776 1247888888888888876 3 579999999999
Q ss_pred HHHHHHH-HHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCCcccccccchhhhhhhh
Q 024065 90 VTLALAA-DKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIY 168 (273)
Q Consensus 90 ~~a~~~a-~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (273)
..+++++ .....+|.+++|++|+..... ... ... ...+.
T Consensus 67 ~~~l~~l~~~~~~~v~g~lLVAp~~~~~~-------~~~--------~~~----------------~~~f~--------- 106 (171)
T PF06821_consen 67 LTALRWLAEQSQKKVAGALLVAPFDPDDP-------EPF--------PPE----------------LDGFT--------- 106 (171)
T ss_dssp HHHHHHHHHTCCSSEEEEEEES--SCGCH-------HCC--------TCG----------------GCCCT---------
T ss_pred HHHHHHHhhcccccccEEEEEcCCCcccc-------cch--------hhh----------------ccccc---------
Confidence 9999999 777889999999998733100 000 000 00000
Q ss_pred cCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCCCceEEEEecCCcccc
Q 024065 169 QLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDHMAM 248 (273)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 248 (273)
.. ......+|.++|.+++|+++|.+.++.+++.+ +++++.++++||+.-
T Consensus 107 -----------------------------~~-p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l-~a~~~~~~~~GHf~~ 155 (171)
T PF06821_consen 107 -----------------------------PL-PRDPLPFPSIVIASDNDPYVPFERAQRLAQRL-GAELIILGGGGHFNA 155 (171)
T ss_dssp -----------------------------TS-HCCHHHCCEEEEEETTBSSS-HHHHHHHHHHH-T-EEEEETS-TTSSG
T ss_pred -----------------------------cC-cccccCCCeEEEEcCCCCccCHHHHHHHHHHc-CCCeEECCCCCCccc
Confidence 00 00111667899999999999999999999998 789999999999987
Q ss_pred ccChHh
Q 024065 249 LSDPQK 254 (273)
Q Consensus 249 ~~~~~~ 254 (273)
-+.-..
T Consensus 156 ~~G~~~ 161 (171)
T PF06821_consen 156 ASGFGP 161 (171)
T ss_dssp GGTHSS
T ss_pred ccCCCc
Confidence 654433
No 87
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.75 E-value=3.7e-16 Score=112.70 Aligned_cols=236 Identities=11% Similarity=0.079 Sum_probs=148.7
Q ss_pred CCceEEEEccCCCchhh-HHHH-----HHHHhhCCcEEEEeccCCCCCCCC--CcC-CCcchhhchHHHHHHHHhCCCCC
Q 024065 8 EEKHFVLVHGVNHGAWC-WYKL-----KARLVAGGHRVTAVDLAASGINMK--RIE-DVHTFHAYSEPLMEVLASLPAEE 78 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~-~~~~-----~~~l~~~g~~vi~~d~~G~G~s~~--~~~-~~~~~~~~~~~l~~~l~~~~~~~ 78 (273)
++|++|=.|..+.+... |..+ +..+.++ |.|+-+|.|||-.-.. +.+ ...|+++++++|..+++++ +.+
T Consensus 45 ~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f-~lk 122 (326)
T KOG2931|consen 45 NKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHF-GLK 122 (326)
T ss_pred CCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhc-Ccc
Confidence 47889999999988876 6544 4466677 9999999999865433 332 3469999999999999999 999
Q ss_pred cEEEEEechhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCCcccccc
Q 024065 79 KVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLF 158 (273)
Q Consensus 79 ~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (273)
.++-+|--.|+.|..++|..||++|-++||+++.....+ ...+...++.. ..+...+ ....
T Consensus 123 ~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~g-wiew~~~K~~s-----------~~l~~~G-------mt~~ 183 (326)
T KOG2931|consen 123 SVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKG-WIEWAYNKVSS-----------NLLYYYG-------MTQG 183 (326)
T ss_pred eEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCch-HHHHHHHHHHH-----------HHHHhhc-------hhhh
Confidence 999999999999999999999999999999997633222 11122222221 1111111 0000
Q ss_pred cchhhhhhhhcCCC----chhHHHhhh-hcc-----CCccccccccccCcCCc-----cCcccceEEEEeecCCCCCCHH
Q 024065 159 GREFLTIKIYQLCP----PEDLELAKM-LVR-----PGSMFIDNLSKESKFSD-----EGYGSVKRVYLVCEEDIGLPKQ 223 (273)
Q Consensus 159 ~~~~~~~~~~~~~~----~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~-----~~~~~~Pvl~i~g~~D~~~~~~ 223 (273)
..+++....+.... .+..+..+. +.+ ....+++.+....++.. ....+||+|++.|++.+.+ +
T Consensus 184 ~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vllvvGd~Sp~~--~ 261 (326)
T KOG2931|consen 184 VKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVLLVVGDNSPHV--S 261 (326)
T ss_pred HHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEEEEecCCCchh--h
Confidence 11111111111000 000010100 000 01112222222222221 1134799999999998775 3
Q ss_pred HHHHHHHhCC--CceEEEEecCCccccccChHhHHHHHHHHHhcc
Q 024065 224 FQHWMIQNYP--VNEVMEIKGGDHMAMLSDPQKLCDCLSQISLNR 266 (273)
Q Consensus 224 ~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 266 (273)
....+...+. +..+..+.++|-.+..++|.++++.+.-|++-.
T Consensus 262 ~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~ 306 (326)
T KOG2931|consen 262 AVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQGM 306 (326)
T ss_pred hhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHccC
Confidence 4445555553 568888999999999999999999999999753
No 88
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.72 E-value=3.4e-16 Score=120.49 Aligned_cols=217 Identities=15% Similarity=0.132 Sum_probs=119.2
Q ss_pred CCCceEEEEccCCCchhh-HHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCC--CCCcEEEE
Q 024065 7 MEEKHFVLVHGVNHGAWC-WYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP--AEEKVILV 83 (273)
Q Consensus 7 ~~~~~vv~lhG~~~~~~~-~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~lv 83 (273)
...|+||++.|+-+-... |..+.+.|.++|+.++++|.||.|.|...+-. .+.+.+...+.+.+...+ +..++.++
T Consensus 188 ~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~-~D~~~l~~aVLd~L~~~p~VD~~RV~~~ 266 (411)
T PF06500_consen 188 KPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLT-QDSSRLHQAVLDYLASRPWVDHTRVGAW 266 (411)
T ss_dssp S-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S--S-CCHHHHHHHHHHHHSTTEEEEEEEEE
T ss_pred CCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCC-cCHHHHHHHHHHHHhcCCccChhheEEE
Confidence 345778888888777766 45555678899999999999999998654322 233455556666666553 34589999
Q ss_pred EechhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCCcccccccchhh
Q 024065 84 GHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFL 163 (273)
Q Consensus 84 G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (273)
|.|+||.+|.++|..+++|++++|..++++...... ....... +...........+
T Consensus 267 G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~-----~~~~~~~---P~my~d~LA~rlG---------------- 322 (411)
T PF06500_consen 267 GFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTD-----PEWQQRV---PDMYLDVLASRLG---------------- 322 (411)
T ss_dssp EETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH------HHHHTTS----HHHHHHHHHHCT----------------
T ss_pred EeccchHHHHHHHHhcccceeeEeeeCchHhhhhcc-----HHHHhcC---CHHHHHHHHHHhC----------------
Confidence 999999999999999999999999999875422111 0111111 0111111111111
Q ss_pred hhhhhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCCCceEEEEecC
Q 024065 164 TIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGG 243 (273)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (273)
. ...+....... ....+...+. ....+..++|+|.+.|++|+++|.+..+.+...-.+.+...++..
T Consensus 323 -----~-~~~~~~~l~~e-l~~~SLk~qG------lL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~~gk~~~~~~~ 389 (411)
T PF06500_consen 323 -----M-AAVSDESLRGE-LNKFSLKTQG------LLSGRRCPTPLLAINGEDDPVSPIEDSRLIAESSTDGKALRIPSK 389 (411)
T ss_dssp -------SCE-HHHHHHH-GGGGSTTTTT------TTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTBTT-EEEEE-SS
T ss_pred -----C-ccCCHHHHHHH-HHhcCcchhc------cccCCCCCcceEEeecCCCCCCCHHHHHHHHhcCCCCceeecCCC
Confidence 0 00111111111 1111111111 111234588999999999999999999988888777788888855
Q ss_pred C-ccccccChHhHHHHHHHHHhc
Q 024065 244 D-HMAMLSDPQKLCDCLSQISLN 265 (273)
Q Consensus 244 g-H~~~~~~~~~~~~~i~~fl~~ 265 (273)
. |.-+ +.-...+.+||++
T Consensus 390 ~~~~gy----~~al~~~~~Wl~~ 408 (411)
T PF06500_consen 390 PLHMGY----PQALDEIYKWLED 408 (411)
T ss_dssp SHHHHH----HHHHHHHHHHHHH
T ss_pred ccccch----HHHHHHHHHHHHH
Confidence 5 4333 3555677777765
No 89
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.72 E-value=4.2e-17 Score=122.63 Aligned_cols=109 Identities=21% Similarity=0.238 Sum_probs=81.2
Q ss_pred CCCceEEEEccCCCch-hhHHH-HHHHH-hhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhC-----CCCC
Q 024065 7 MEEKHFVLVHGVNHGA-WCWYK-LKARL-VAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL-----PAEE 78 (273)
Q Consensus 7 ~~~~~vv~lhG~~~~~-~~~~~-~~~~l-~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~-----~~~~ 78 (273)
.++|++|++|||+++. ..|.. +.+.+ ...+++|+++|+++++.+..+. ...+....++++.++++.+ .+.+
T Consensus 34 ~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~-a~~~~~~v~~~la~~l~~L~~~~g~~~~ 112 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQ-AVNNTRVVGAELAKFLDFLVDNTGLSLE 112 (275)
T ss_pred CCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHH-HHHhHHHHHHHHHHHHHHHHHhcCCChH
Confidence 3589999999999887 66754 44444 4457999999999984433221 2234555556666666554 1457
Q ss_pred cEEEEEechhHHHHHHHHHHCCCccceeEEeeccCCCC
Q 024065 79 KVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDT 116 (273)
Q Consensus 79 ~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~ 116 (273)
++++|||||||.+|..++.++|++|.++++++|..+..
T Consensus 113 ~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~f 150 (275)
T cd00707 113 NVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPLF 150 (275)
T ss_pred HEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcccc
Confidence 89999999999999999999999999999999886644
No 90
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.71 E-value=1.3e-15 Score=113.80 Aligned_cols=113 Identities=15% Similarity=0.281 Sum_probs=96.5
Q ss_pred CceEEEEccCCCchhhHHHHHHHHhhC---CcEEEEeccCCCCCCCCC-----cCCCcchhhchHHHHHHHHhC-C----
Q 024065 9 EKHFVLVHGVNHGAWCWYKLKARLVAG---GHRVTAVDLAASGINMKR-----IEDVHTFHAYSEPLMEVLASL-P---- 75 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~~~~~~~l~~~---g~~vi~~d~~G~G~s~~~-----~~~~~~~~~~~~~l~~~l~~~-~---- 75 (273)
+..+||++|.++-...|..+...|.++ .+.|+++.+.||-.++.. ....++++++++.-.++++++ .
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 567999999999999999998888743 699999999999887665 346689999999988888887 2
Q ss_pred CCCcEEEEEechhHHHHHHHHHHCC---CccceeEEeeccCCCCCCCcc
Q 024065 76 AEEKVILVGHSLGGVTLALAADKFP---HKISVAVFVTAFMPDTTHRPS 121 (273)
Q Consensus 76 ~~~~~~lvG~S~Gg~~a~~~a~~~p---~~v~~lil~~~~~~~~~~~~~ 121 (273)
...+++|+|||.|+.++++.+.+++ .+|.+++++-|+......++.
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ia~Sp~ 130 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDIAKSPN 130 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccccccCCch
Confidence 5678999999999999999999999 789999999998766655544
No 91
>PRK10162 acetyl esterase; Provisional
Probab=99.70 E-value=4e-15 Score=114.78 Aligned_cols=106 Identities=12% Similarity=0.071 Sum_probs=71.8
Q ss_pred CCceEEEEccCC---CchhhHHHHHHHHhh-CCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCC-CCCcEEE
Q 024065 8 EEKHFVLVHGVN---HGAWCWYKLKARLVA-GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP-AEEKVIL 82 (273)
Q Consensus 8 ~~~~vv~lhG~~---~~~~~~~~~~~~l~~-~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~l 82 (273)
+.|.||++||.+ ++...|..+...|++ .|+.|+++|+|.......+. ...+..+..+.+.+..+.++ +.+++++
T Consensus 80 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~-~~~D~~~a~~~l~~~~~~~~~d~~~i~l 158 (318)
T PRK10162 80 SQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFPQ-AIEEIVAVCCYFHQHAEDYGINMSRIGF 158 (318)
T ss_pred CCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCCC-cHHHHHHHHHHHHHhHHHhCCChhHEEE
Confidence 468899999976 566778888888887 48999999999654332221 11112222222333333341 3468999
Q ss_pred EEechhHHHHHHHHHHC------CCccceeEEeeccCC
Q 024065 83 VGHSLGGVTLALAADKF------PHKISVAVFVTAFMP 114 (273)
Q Consensus 83 vG~S~Gg~~a~~~a~~~------p~~v~~lil~~~~~~ 114 (273)
+|+|+||.+|+.++.+. +.++++++++.|...
T Consensus 159 ~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 196 (318)
T PRK10162 159 AGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYG 196 (318)
T ss_pred EEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccC
Confidence 99999999999988653 357899999987643
No 92
>COG0400 Predicted esterase [General function prediction only]
Probab=99.69 E-value=1.5e-15 Score=107.69 Aligned_cols=173 Identities=14% Similarity=0.121 Sum_probs=115.0
Q ss_pred CCCCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCC--CCCCC---CCcCCCcch-------hhchHHHHHHHHh
Q 024065 6 GMEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAA--SGINM---KRIEDVHTF-------HAYSEPLMEVLAS 73 (273)
Q Consensus 6 g~~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G--~G~s~---~~~~~~~~~-------~~~~~~l~~~l~~ 73 (273)
+...|+||++||+|++...+-++...+..+ +.++.+-=+- .|.-. ......++. ..+++.+..+.++
T Consensus 15 ~p~~~~iilLHG~Ggde~~~~~~~~~~~P~-~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~ 93 (207)
T COG0400 15 DPAAPLLILLHGLGGDELDLVPLPELILPN-ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEE 93 (207)
T ss_pred CCCCcEEEEEecCCCChhhhhhhhhhcCCC-CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHH
Confidence 345678999999999999988866666655 6666553110 00000 000011222 3334444444444
Q ss_pred C-CCCCcEEEEEechhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCC
Q 024065 74 L-PAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPS 152 (273)
Q Consensus 74 ~-~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (273)
. ...++++++|+|.||++++.+..++|+.++++|++++..+......
T Consensus 94 ~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~~~-------------------------------- 141 (207)
T COG0400 94 YGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPELL-------------------------------- 141 (207)
T ss_pred hCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCccc--------------------------------
Confidence 4 1347999999999999999999999999999999998754221100
Q ss_pred cccccccchhhhhhhhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhC
Q 024065 153 HISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNY 232 (273)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~ 232 (273)
.....+|+++++|+.|+++|.....++.+.+
T Consensus 142 -------------------------------------------------~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l 172 (207)
T COG0400 142 -------------------------------------------------PDLAGTPILLSHGTEDPVVPLALAEALAEYL 172 (207)
T ss_pred -------------------------------------------------cccCCCeEEEeccCcCCccCHHHHHHHHHHH
Confidence 0001779999999999999988877776654
Q ss_pred ----CCceEEEEecCCccccccChHhHHHHHHHHHhc
Q 024065 233 ----PVNEVMEIKGGDHMAMLSDPQKLCDCLSQISLN 265 (273)
Q Consensus 233 ----~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 265 (273)
-+++.+.++ +||....+. .+.+.+|+.+
T Consensus 173 ~~~g~~v~~~~~~-~GH~i~~e~----~~~~~~wl~~ 204 (207)
T COG0400 173 TASGADVEVRWHE-GGHEIPPEE----LEAARSWLAN 204 (207)
T ss_pred HHcCCCEEEEEec-CCCcCCHHH----HHHHHHHHHh
Confidence 466888888 999877543 3455556654
No 93
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.68 E-value=5.1e-15 Score=100.38 Aligned_cols=173 Identities=13% Similarity=0.052 Sum_probs=117.7
Q ss_pred CCceEEEEccCC-----CchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCc-EE
Q 024065 8 EEKHFVLVHGVN-----HGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEK-VI 81 (273)
Q Consensus 8 ~~~~vv~lhG~~-----~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~ 81 (273)
..|..|++|.-+ .+...-..++..|.++||.++.+|+||.|.|....+....--+-+....++++......+ ..
T Consensus 27 ~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aaldW~~~~hp~s~~~~ 106 (210)
T COG2945 27 AAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGELEDAAAALDWLQARHPDSASCW 106 (210)
T ss_pred CCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCcchHHHHHHHHHHHHhhCCCchhhh
Confidence 356778887543 233335677888999999999999999999988765322211222223334444323334 46
Q ss_pred EEEechhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCCcccccccch
Q 024065 82 LVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGRE 161 (273)
Q Consensus 82 lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (273)
+.|+|+|+.|++.+|.+.|+ +...+.+.|... . ..+
T Consensus 107 l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~----~-----~df---------------------------------- 142 (210)
T COG2945 107 LAGFSFGAYIAMQLAMRRPE-ILVFISILPPIN----A-----YDF---------------------------------- 142 (210)
T ss_pred hcccchHHHHHHHHHHhccc-ccceeeccCCCC----c-----hhh----------------------------------
Confidence 88999999999999999885 334444443211 0 000
Q ss_pred hhhhhhhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCCCceEEEEe
Q 024065 162 FLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIK 241 (273)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 241 (273)
. ......+|.++|+|+.|.+++....-++.+. ...++++++
T Consensus 143 -------------------s-------------------~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~-~~~~~i~i~ 183 (210)
T COG2945 143 -------------------S-------------------FLAPCPSPGLVIQGDADDVVDLVAVLKWQES-IKITVITIP 183 (210)
T ss_pred -------------------h-------------------hccCCCCCceeEecChhhhhcHHHHHHhhcC-CCCceEEec
Confidence 0 0011167999999999999998888888877 456899999
Q ss_pred cCCccccccChHhHHHHHHHHHh
Q 024065 242 GGDHMAMLSDPQKLCDCLSQISL 264 (273)
Q Consensus 242 ~~gH~~~~~~~~~~~~~i~~fl~ 264 (273)
+++||++-. -+.+.+.|.+||.
T Consensus 184 ~a~HFF~gK-l~~l~~~i~~~l~ 205 (210)
T COG2945 184 GADHFFHGK-LIELRDTIADFLE 205 (210)
T ss_pred CCCceeccc-HHHHHHHHHHHhh
Confidence 999997754 6778899999985
No 94
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.68 E-value=1.5e-15 Score=113.03 Aligned_cols=102 Identities=18% Similarity=0.202 Sum_probs=91.7
Q ss_pred CCceEEEEccCCCchhhHHHHHHHHhhC---------CcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCC
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLKARLVAG---------GHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEE 78 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~~~l~~~---------g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 78 (273)
.-.||+++|||+++-+.|..+++.|.+. -|.||++.+||+|.|+.+....++..+.|.-+..++-.+ +..
T Consensus 151 ~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~GFn~~a~ArvmrkLMlRL-g~n 229 (469)
T KOG2565|consen 151 KVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTGFNAAATARVMRKLMLRL-GYN 229 (469)
T ss_pred cccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCCccHHHHHHHHHHHHHHh-Ccc
Confidence 3458999999999999999999988753 278999999999999999887789999999999999999 999
Q ss_pred cEEEEEechhHHHHHHHHHHCCCccceeEEee
Q 024065 79 KVILVGHSLGGVTLALAADKFPHKISVAVFVT 110 (273)
Q Consensus 79 ~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~ 110 (273)
++.+-|-.||+.|+..+|..+|++|.++=+--
T Consensus 230 kffiqGgDwGSiI~snlasLyPenV~GlHlnm 261 (469)
T KOG2565|consen 230 KFFIQGGDWGSIIGSNLASLYPENVLGLHLNM 261 (469)
T ss_pred eeEeecCchHHHHHHHHHhhcchhhhHhhhcc
Confidence 99999999999999999999999998865433
No 95
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.66 E-value=1.5e-15 Score=112.27 Aligned_cols=103 Identities=17% Similarity=0.261 Sum_probs=67.0
Q ss_pred CCceEEEEccCCCchhh---HHHHHHHHhhCCcEEEEeccC----CCCCCCCCcCCCcchhhchHHHHHHHHhC---C--
Q 024065 8 EEKHFVLVHGVNHGAWC---WYKLKARLVAGGHRVTAVDLA----ASGINMKRIEDVHTFHAYSEPLMEVLASL---P-- 75 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~---~~~~~~~l~~~g~~vi~~d~~----G~G~s~~~~~~~~~~~~~~~~l~~~l~~~---~-- 75 (273)
....||||.|++.+... ...+++.|.+.||.|+-+-++ |+|.+ ++++-++||.++++.+ .
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~--------SL~~D~~eI~~~v~ylr~~~~g 103 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTS--------SLDRDVEEIAQLVEYLRSEKGG 103 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S----------HHHHHHHHHHHHHHHHHHS--
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcc--------hhhhHHHHHHHHHHHHHHhhcc
Confidence 35689999999876544 578889998778999998765 44433 6777788888877766 1
Q ss_pred --CCCcEEEEEechhHHHHHHHHHHCC-----CccceeEEeeccCCCCCC
Q 024065 76 --AEEKVILVGHSLGGVTLALAADKFP-----HKISVAVFVTAFMPDTTH 118 (273)
Q Consensus 76 --~~~~~~lvG~S~Gg~~a~~~a~~~p-----~~v~~lil~~~~~~~~~~ 118 (273)
+.++|+|+|||.|+.-+++|+.... ..|++.||-+|.......
T Consensus 104 ~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~ 153 (303)
T PF08538_consen 104 HFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAI 153 (303)
T ss_dssp ----S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTST
T ss_pred ccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHh
Confidence 4579999999999999999987643 579999999998654433
No 96
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.66 E-value=2.1e-14 Score=100.71 Aligned_cols=181 Identities=20% Similarity=0.247 Sum_probs=110.4
Q ss_pred EEEEccCCCchhhHH--HHHHHHhhCC--cEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEech
Q 024065 12 FVLVHGVNHGAWCWY--KLKARLVAGG--HRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSL 87 (273)
Q Consensus 12 vv~lhG~~~~~~~~~--~~~~~l~~~g--~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~ 87 (273)
|+++|||.++..... .+.+.+.+.+ ..+.++|++ .+.....+.+.++++.. ..+.+.|||.||
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~------------~~p~~a~~~l~~~i~~~-~~~~~~liGSSl 68 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP------------PFPEEAIAQLEQLIEEL-KPENVVLIGSSL 68 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC------------cCHHHHHHHHHHHHHhC-CCCCeEEEEECh
Confidence 799999999988764 4555666654 456677765 36677788889999998 666799999999
Q ss_pred hHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCCcccccccchhhhhhh
Q 024065 88 GGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKI 167 (273)
Q Consensus 88 Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (273)
||..|..+|.+++ +++ |+++|..... ..+....... ... .....+.-
T Consensus 69 GG~~A~~La~~~~--~~a-vLiNPav~p~-----~~l~~~iG~~-----------~~~-----------~~~e~~~~--- 115 (187)
T PF05728_consen 69 GGFYATYLAERYG--LPA-VLINPAVRPY-----ELLQDYIGEQ-----------TNP-----------YTGESYEL--- 115 (187)
T ss_pred HHHHHHHHHHHhC--CCE-EEEcCCCCHH-----HHHHHhhCcc-----------ccC-----------CCCcccee---
Confidence 9999999999886 434 8899864311 1111111100 000 00000000
Q ss_pred hcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCCCceEEEEecCCccc
Q 024065 168 YQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDHMA 247 (273)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 247 (273)
.......... +... . .....+++++.++.|.+++.+.+. +.+.++...+.+|++|-+
T Consensus 116 ----~~~~~~~l~~-----------l~~~----~-~~~~~~~lvll~~~DEvLd~~~a~---~~~~~~~~~i~~ggdH~f 172 (187)
T PF05728_consen 116 ----TEEHIEELKA-----------LEVP----Y-PTNPERYLVLLQTGDEVLDYREAV---AKYRGCAQIIEEGGDHSF 172 (187)
T ss_pred ----chHhhhhcce-----------Eecc----c-cCCCccEEEEEecCCcccCHHHHH---HHhcCceEEEEeCCCCCC
Confidence 0000000000 0000 0 111568999999999999985443 334456666778899975
Q ss_pred cccChHhHHHHHHHHH
Q 024065 248 MLSDPQKLCDCLSQIS 263 (273)
Q Consensus 248 ~~~~~~~~~~~i~~fl 263 (273)
. +-++....|.+|+
T Consensus 173 ~--~f~~~l~~i~~f~ 186 (187)
T PF05728_consen 173 Q--DFEEYLPQIIAFL 186 (187)
T ss_pred c--cHHHHHHHHHHhh
Confidence 4 4566667777776
No 97
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.66 E-value=1.1e-14 Score=120.50 Aligned_cols=104 Identities=16% Similarity=0.027 Sum_probs=83.3
Q ss_pred CCceEEEEccCCCchh---hH-HHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhC----CCCCc
Q 024065 8 EEKHFVLVHGVNHGAW---CW-YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL----PAEEK 79 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~---~~-~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~----~~~~~ 79 (273)
..|+||++||++.+.. .+ ......|.++||.|+++|+||+|.|...... .+ ...++|+.++++.+ ....+
T Consensus 21 ~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~-~~-~~~~~D~~~~i~~l~~q~~~~~~ 98 (550)
T TIGR00976 21 PVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDL-LG-SDEAADGYDLVDWIAKQPWCDGN 98 (550)
T ss_pred CCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEe-cC-cccchHHHHHHHHHHhCCCCCCc
Confidence 4789999999987653 22 2345678889999999999999999875432 23 56778888888776 12368
Q ss_pred EEEEEechhHHHHHHHHHHCCCccceeEEeeccC
Q 024065 80 VILVGHSLGGVTLALAADKFPHKISVAVFVTAFM 113 (273)
Q Consensus 80 ~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~ 113 (273)
+.++|||+||.+++.+|..+|++++++|..++..
T Consensus 99 v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~ 132 (550)
T TIGR00976 99 VGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVW 132 (550)
T ss_pred EEEEEeChHHHHHHHHhccCCCceeEEeecCccc
Confidence 9999999999999999999999999999888753
No 98
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.65 E-value=3.8e-15 Score=103.84 Aligned_cols=233 Identities=14% Similarity=0.163 Sum_probs=129.2
Q ss_pred eEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcC--CCcchhhch-HHHHHHHHhC---CCCCcEEEEE
Q 024065 11 HFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIE--DVHTFHAYS-EPLMEVLASL---PAEEKVILVG 84 (273)
Q Consensus 11 ~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~--~~~~~~~~~-~~l~~~l~~~---~~~~~~~lvG 84 (273)
.+++-.+.+.....|++++..+.++||+|+.+|+||.|.|+.... ..+.+.|++ .|+.+.++.+ ....+.+.||
T Consensus 32 ~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vg 111 (281)
T COG4757 32 RLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALPGHPLYFVG 111 (281)
T ss_pred cEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcchHHHHHHHHhhCCCCceEEee
Confidence 566666677777788999999999999999999999999986543 224555554 3555555444 1567999999
Q ss_pred echhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCCcccccccchhhh
Q 024065 85 HSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLT 164 (273)
Q Consensus 85 ~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (273)
||+||.+.-.+. +++ +.......+.......... ....+. .-....... + ...+-+..+.
T Consensus 112 HS~GGqa~gL~~-~~~-k~~a~~vfG~gagwsg~m~--~~~~l~----------~~~l~~lv~----p--~lt~w~g~~p 171 (281)
T COG4757 112 HSFGGQALGLLG-QHP-KYAAFAVFGSGAGWSGWMG--LRERLG----------AVLLWNLVG----P--PLTFWKGYMP 171 (281)
T ss_pred ccccceeecccc-cCc-ccceeeEeccccccccchh--hhhccc----------ceeeccccc----c--chhhccccCc
Confidence 999999655544 555 4554444443321111000 000000 000000000 0 0000011111
Q ss_pred hhhhcC---CCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCCCceE--EE
Q 024065 165 IKIYQL---CPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEV--ME 239 (273)
Q Consensus 165 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~--~~ 239 (273)
..+... .+.........+.+....+..+-........-..+++|+..+...+|+.+|+...+.+....+|+.+ ..
T Consensus 172 ~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~nApl~~~~ 251 (281)
T COG4757 172 KDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFASFYRNAPLEMRD 251 (281)
T ss_pred HhhcCCCccCcchHHHHHHHHhcCccccccChhHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhhcCccccee
Confidence 111111 1111111111222211111111000000111223388999999999999999999999999888744 44
Q ss_pred Eec----CCccccccCh-HhHHHHHHHHH
Q 024065 240 IKG----GDHMAMLSDP-QKLCDCLSQIS 263 (273)
Q Consensus 240 ~~~----~gH~~~~~~~-~~~~~~i~~fl 263 (273)
++. -||+-.+.++ |.+.+.+.+|+
T Consensus 252 ~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 252 LPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred cCcccCcccchhhhccchHHHHHHHHHhh
Confidence 443 4999999888 77877777775
No 99
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.65 E-value=9.7e-15 Score=111.53 Aligned_cols=211 Identities=16% Similarity=0.073 Sum_probs=113.0
Q ss_pred CCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcC-------------------CCcchhhchHHHH
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIE-------------------DVHTFHAYSEPLM 68 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~-------------------~~~~~~~~~~~l~ 68 (273)
.-|.||.+||.++....|..... ++..||.|+.+|.||+|....... +.+-+..+..|..
T Consensus 82 ~~Pavv~~hGyg~~~~~~~~~~~-~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ 160 (320)
T PF05448_consen 82 KLPAVVQFHGYGGRSGDPFDLLP-WAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAV 160 (320)
T ss_dssp SEEEEEEE--TT--GGGHHHHHH-HHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHH
T ss_pred CcCEEEEecCCCCCCCCcccccc-cccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHH
Confidence 37889999999999888866554 567899999999999993221110 0111222345555
Q ss_pred HHHHhC---C--CCCcEEEEEechhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhh
Q 024065 69 EVLASL---P--AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQF 143 (273)
Q Consensus 69 ~~l~~~---~--~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (273)
..++.+ + +.+++.+.|.|+||.+++.+|+..| +|++++...|..... ........ ....+
T Consensus 161 ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d~--------~~~~~~~~-~~~~y----- 225 (320)
T PF05448_consen 161 RAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCDF--------RRALELRA-DEGPY----- 225 (320)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSSH--------HHHHHHT---STTT-----
T ss_pred HHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccch--------hhhhhcCC-ccccH-----
Confidence 555444 2 3468999999999999999999876 799999888764311 11000000 00000
Q ss_pred hhccCCCCCcccccccchhhhhhhh--cCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCC
Q 024065 144 SQCDASNPSHISMLFGREFLTIKIY--QLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLP 221 (273)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~ 221 (273)
..+..++. ........+.... +...+.....+++++|+++-.|-.|.+||
T Consensus 226 -----------------~~~~~~~~~~d~~~~~~~~v~~~-----------L~Y~D~~nfA~ri~~pvl~~~gl~D~~cP 277 (320)
T PF05448_consen 226 -----------------PEIRRYFRWRDPHHEREPEVFET-----------LSYFDAVNFARRIKCPVLFSVGLQDPVCP 277 (320)
T ss_dssp -----------------HHHHHHHHHHSCTHCHHHHHHHH-----------HHTT-HHHHGGG--SEEEEEEETT-SSS-
T ss_pred -----------------HHHHHHHhccCCCcccHHHHHHH-----------HhhhhHHHHHHHcCCCEEEEEecCCCCCC
Confidence 00011110 0000111111110 11111112234569999999999999999
Q ss_pred HHHHHHHHHhCC-CceEEEEecCCccccccChHhHHHHHHHHHhc
Q 024065 222 KQFQHWMIQNYP-VNEVMEIKGGDHMAMLSDPQKLCDCLSQISLN 265 (273)
Q Consensus 222 ~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 265 (273)
+..+-...+.++ ..++.++|..||....+ .-.+...+||.+
T Consensus 278 P~t~fA~yN~i~~~K~l~vyp~~~He~~~~---~~~~~~~~~l~~ 319 (320)
T PF05448_consen 278 PSTQFAAYNAIPGPKELVVYPEYGHEYGPE---FQEDKQLNFLKE 319 (320)
T ss_dssp HHHHHHHHCC--SSEEEEEETT--SSTTHH---HHHHHHHHHHHH
T ss_pred chhHHHHHhccCCCeeEEeccCcCCCchhh---HHHHHHHHHHhc
Confidence 999999999886 45899999999966532 225666677654
No 100
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.63 E-value=1.6e-14 Score=105.69 Aligned_cols=101 Identities=16% Similarity=0.205 Sum_probs=88.2
Q ss_pred ceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEechhH
Q 024065 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGG 89 (273)
Q Consensus 10 ~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg 89 (273)
|+|+|+||.++....|..+...|... ..|+.++.||.+.-... ..+++++++...+.|....+..+++|+|||+||
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~-~~v~~l~a~g~~~~~~~---~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG 76 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL-LPVYGLQAPGYGAGEQP---FASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGG 76 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC-ceeeccccCcccccccc---cCCHHHHHHHHHHHHHHhCCCCCEEEEeecccc
Confidence 68999999999999999999999987 99999999999863333 248999999999888888677899999999999
Q ss_pred HHHHHHHHH---CCCccceeEEeeccCC
Q 024065 90 VTLALAADK---FPHKISVAVFVTAFMP 114 (273)
Q Consensus 90 ~~a~~~a~~---~p~~v~~lil~~~~~~ 114 (273)
.+|+..|.+ ..+.|..++++++..+
T Consensus 77 ~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 77 AVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 999999875 3467999999998755
No 101
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.63 E-value=8.4e-14 Score=102.11 Aligned_cols=176 Identities=16% Similarity=0.080 Sum_probs=128.6
Q ss_pred ceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCC-CCCCCCcC-----C-----CcchhhchHHHHHHHHhC----
Q 024065 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAAS-GINMKRIE-----D-----VHTFHAYSEPLMEVLASL---- 74 (273)
Q Consensus 10 ~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~-G~s~~~~~-----~-----~~~~~~~~~~l~~~l~~~---- 74 (273)
|.||++|++.+-....+.+++.|++.||.|+++|+-+. |.+..... . ..+..+...|+.+.++.+
T Consensus 28 P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~ 107 (236)
T COG0412 28 PGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQP 107 (236)
T ss_pred CEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCC
Confidence 89999999999999999999999999999999998763 33322111 0 122356777888887777
Q ss_pred -CCCCcEEEEEechhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCCc
Q 024065 75 -PAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSH 153 (273)
Q Consensus 75 -~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (273)
...+++.++|+||||.+++.++.+.| .+++.+..-+........
T Consensus 108 ~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~~~---------------------------------- 152 (236)
T COG0412 108 QVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADDTA---------------------------------- 152 (236)
T ss_pred CCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCccc----------------------------------
Confidence 13567999999999999999998887 788877665542100000
Q ss_pred ccccccchhhhhhhhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCC
Q 024065 154 ISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYP 233 (273)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~ 233 (273)
....+++|+|++.|+.|..+|.+....+.+.+.
T Consensus 153 -----------------------------------------------~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~ 185 (236)
T COG0412 153 -----------------------------------------------DAPKIKVPVLLHLAGEDPYIPAADVDALAAALE 185 (236)
T ss_pred -----------------------------------------------ccccccCcEEEEecccCCCCChhHHHHHHHHHH
Confidence 011239999999999999999887776665542
Q ss_pred ----CceEEEEecCCccccccC--------h---HhHHHHHHHHHhccc
Q 024065 234 ----VNEVMEIKGGDHMAMLSD--------P---QKLCDCLSQISLNRH 267 (273)
Q Consensus 234 ----~~~~~~~~~~gH~~~~~~--------~---~~~~~~i~~fl~~~~ 267 (273)
.+++.+++++.|.++.+. + +.-.+.+.+|+++..
T Consensus 186 ~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~ 234 (236)
T COG0412 186 DAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLL 234 (236)
T ss_pred hcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhc
Confidence 568899999999887542 1 455677777877653
No 102
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.61 E-value=1.8e-14 Score=109.61 Aligned_cols=234 Identities=15% Similarity=0.137 Sum_probs=137.2
Q ss_pred CCceEEEEccCCCchhhH-----HHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhch-HHHHHHHHhC---CCCC
Q 024065 8 EEKHFVLVHGVNHGAWCW-----YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYS-EPLMEVLASL---PAEE 78 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~-----~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~-~~l~~~l~~~---~~~~ 78 (273)
-++|++++|.+-.....| ..++..|.++|+.|+.+++++-..+.. ..++++++ +.+.+.++.. .+.+
T Consensus 106 ~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~----~~~~edYi~e~l~~aid~v~~itg~~ 181 (445)
T COG3243 106 LKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA----AKNLEDYILEGLSEAIDTVKDITGQK 181 (445)
T ss_pred CCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhh----hccHHHHHHHHHHHHHHHHHHHhCcc
Confidence 367999999998777776 468889999999999999987555543 23566665 4444333332 3779
Q ss_pred cEEEEEechhHHHHHHHHHHCCCc-cceeEEeeccCCCCCCCcch------hHhhhhhhc---cCCCccchhhhhhhccC
Q 024065 79 KVILVGHSLGGVTLALAADKFPHK-ISVAVFVTAFMPDTTHRPSF------VLEQYSEKM---GKEDDSWLDTQFSQCDA 148 (273)
Q Consensus 79 ~~~lvG~S~Gg~~a~~~a~~~p~~-v~~lil~~~~~~~~~~~~~~------~~~~~~~~~---~~~~~~~~~~~~~~~~~ 148 (273)
++.++|+|.||.++..+++.++.+ |++++++.+........... ....+...+ ...+...+...+....+
T Consensus 182 ~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lpg~~ma~~F~mLrp 261 (445)
T COG3243 182 DINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGWYMAIVFFLLRP 261 (445)
T ss_pred ccceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCChHHHHHHHHhcCc
Confidence 999999999999999999888877 99999888764433211111 111111111 00111112222222211
Q ss_pred CCCCcccccccchhhhhhhhcCCC-----------------chhHHHhhhhccCCccccccccccCcCCccCcccceEEE
Q 024065 149 SNPSHISMLFGREFLTIKIYQLCP-----------------PEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVY 211 (273)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~ 211 (273)
..... ..+.........+ .........++.........+.-.....++..++||++.
T Consensus 262 --ndliw----~~fV~nyl~ge~pl~fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l~~g~~~v~G~~VdL~~It~pvy~ 335 (445)
T COG3243 262 --NDLIW----NYFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSEYLRNFYLENRLIRGGLEVSGTMVDLGDITCPVYN 335 (445)
T ss_pred --cccch----HHHHHHhcCCCCCCchhHHHhhCCCccCchHHHHHHHHHHHHhChhhccceEECCEEechhhcccceEE
Confidence 00000 0111111111110 011111212222222222223333344557788999999
Q ss_pred EeecCCCCCCHHHHHHHHHhCCCceEEEEecCCccccccC
Q 024065 212 LVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDHMAMLSD 251 (273)
Q Consensus 212 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 251 (273)
+.|++|.+.|++......+.+++-...++-++||....-+
T Consensus 336 ~a~~~DhI~P~~Sv~~g~~l~~g~~~f~l~~sGHIa~vVN 375 (445)
T COG3243 336 LAAEEDHIAPWSSVYLGARLLGGEVTFVLSRSGHIAGVVN 375 (445)
T ss_pred EeecccccCCHHHHHHHHHhcCCceEEEEecCceEEEEeC
Confidence 9999999999999999999998843334445999876654
No 103
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.60 E-value=2.2e-14 Score=130.82 Aligned_cols=100 Identities=15% Similarity=0.179 Sum_probs=87.0
Q ss_pred CceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEechh
Q 024065 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLG 88 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~G 88 (273)
+++++|+||++++...|..+.+.|... ++|++++.+|++.+.. ..++++++++++.+.++.+...++++++|||+|
T Consensus 1068 ~~~l~~lh~~~g~~~~~~~l~~~l~~~-~~v~~~~~~g~~~~~~---~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~G 1143 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFSVLSRYLDPQ-WSIYGIQSPRPDGPMQ---TATSLDEVCEAHLATLLEQQPHGPYHLLGYSLG 1143 (1296)
T ss_pred CCCeEEecCCCCchHHHHHHHHhcCCC-CcEEEEECCCCCCCCC---CCCCHHHHHHHHHHHHHhhCCCCCEEEEEechh
Confidence 688999999999999999999999765 9999999999986632 236999999999999988734468999999999
Q ss_pred HHHHHHHHHH---CCCccceeEEeecc
Q 024065 89 GVTLALAADK---FPHKISVAVFVTAF 112 (273)
Q Consensus 89 g~~a~~~a~~---~p~~v~~lil~~~~ 112 (273)
|.+|.++|.+ .++++..++++++.
T Consensus 1144 g~vA~e~A~~l~~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1144 GTLAQGIAARLRARGEEVAFLGLLDTW 1170 (1296)
T ss_pred hHHHHHHHHHHHHcCCceeEEEEecCC
Confidence 9999999985 57889999999874
No 104
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.60 E-value=7.2e-15 Score=122.48 Aligned_cols=90 Identities=21% Similarity=0.205 Sum_probs=75.7
Q ss_pred CceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCC---------cCC-------------CcchhhchHH
Q 024065 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKR---------IED-------------VHTFHAYSEP 66 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~---------~~~-------------~~~~~~~~~~ 66 (273)
.|+|||+||++++...|..+++.|.++||+|+++|+||||.|... ... ..++++.+.|
T Consensus 449 ~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~D 528 (792)
T TIGR03502 449 WPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILD 528 (792)
T ss_pred CcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHH
Confidence 468999999999999999999999988999999999999999543 111 1267888999
Q ss_pred HHHHHHhCC---------------CCCcEEEEEechhHHHHHHHHHH
Q 024065 67 LMEVLASLP---------------AEEKVILVGHSLGGVTLALAADK 98 (273)
Q Consensus 67 l~~~l~~~~---------------~~~~~~lvG~S~Gg~~a~~~a~~ 98 (273)
+..+...+. +..+++++||||||.++..++..
T Consensus 529 ll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 529 LLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 988887772 13589999999999999999865
No 105
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.58 E-value=7.6e-15 Score=87.82 Aligned_cols=65 Identities=22% Similarity=0.308 Sum_probs=59.6
Q ss_pred CCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHH
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLA 72 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~ 72 (273)
.+.+|+++||++.++..|..+++.|+++||.|+++|+||||.|+.......+++++++|+..+++
T Consensus 15 ~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 15 PKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 37789999999999999999999999999999999999999999777666799999999998874
No 106
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.56 E-value=6.7e-13 Score=93.68 Aligned_cols=206 Identities=15% Similarity=0.140 Sum_probs=104.2
Q ss_pred CCCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCC-CCCCCCcCCCcchhhchHHHHHHHHhC--CCCCcEEEE
Q 024065 7 MEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAAS-GINMKRIEDVHTFHAYSEPLMEVLASL--PAEEKVILV 83 (273)
Q Consensus 7 ~~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~-G~s~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~lv 83 (273)
...++||+.+||+.....|..++.+|+..||+|+-+|...| |.|+....+ +++....+++..+++++ .+..++-|+
T Consensus 28 ~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~e-ftms~g~~sL~~V~dwl~~~g~~~~GLI 106 (294)
T PF02273_consen 28 KRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINE-FTMSIGKASLLTVIDWLATRGIRRIGLI 106 (294)
T ss_dssp --S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B--------------HHHHHHHHHHHHHHHHHTT---EEEE
T ss_pred ccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCChhh-cchHHhHHHHHHHHHHHHhcCCCcchhh
Confidence 34689999999999999999999999999999999998876 888887755 79988889988888777 477889999
Q ss_pred EechhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCCc-cccccc-ch
Q 024065 84 GHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSH-ISMLFG-RE 161 (273)
Q Consensus 84 G~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~ 161 (273)
+-|+.|.+|+..|.+. .+.-+|..-+.+. ....+.+.. ...++........ .... ....++ ..
T Consensus 107 AaSLSaRIAy~Va~~i--~lsfLitaVGVVn--------lr~TLe~al---~~Dyl~~~i~~lp--~dldfeGh~l~~~v 171 (294)
T PF02273_consen 107 AASLSARIAYEVAADI--NLSFLITAVGVVN--------LRDTLEKAL---GYDYLQLPIEQLP--EDLDFEGHNLGAEV 171 (294)
T ss_dssp EETTHHHHHHHHTTTS----SEEEEES--S---------HHHHHHHHH---SS-GGGS-GGG----SEEEETTEEEEHHH
T ss_pred hhhhhHHHHHHHhhcc--CcceEEEEeeeee--------HHHHHHHHh---ccchhhcchhhCC--CcccccccccchHH
Confidence 9999999999999854 4667776655432 111111111 0111111100000 0000 000000 11
Q ss_pred hhhhhhhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhC--CCceEEE
Q 024065 162 FLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNY--PVNEVME 239 (273)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~ 239 (273)
|..+.+......-. .. ..+.....+|++.+++++|.++......++...+ +..+++.
T Consensus 172 Fv~dc~e~~w~~l~---------------ST------~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klys 230 (294)
T PF02273_consen 172 FVTDCFEHGWDDLD---------------ST------INDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYS 230 (294)
T ss_dssp HHHHHHHTT-SSHH---------------HH------HHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEE
T ss_pred HHHHHHHcCCccch---------------hH------HHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEE
Confidence 11111111111100 00 1112233999999999999999999888888865 3568899
Q ss_pred EecCCccccc
Q 024065 240 IKGGDHMAML 249 (273)
Q Consensus 240 ~~~~gH~~~~ 249 (273)
++|++|-...
T Consensus 231 l~Gs~HdL~e 240 (294)
T PF02273_consen 231 LPGSSHDLGE 240 (294)
T ss_dssp ETT-SS-TTS
T ss_pred ecCccchhhh
Confidence 9999998653
No 107
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.55 E-value=3.4e-12 Score=84.05 Aligned_cols=184 Identities=16% Similarity=0.081 Sum_probs=126.0
Q ss_pred CCCCceEEEEccCCCchhh--HHHHHHHHhhCCcEEEEeccCCC-----CCCCCCcCCCcchhhchHHHHHHHHhCCCCC
Q 024065 6 GMEEKHFVLVHGVNHGAWC--WYKLKARLVAGGHRVTAVDLAAS-----GINMKRIEDVHTFHAYSEPLMEVLASLPAEE 78 (273)
Q Consensus 6 g~~~~~vv~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~d~~G~-----G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 78 (273)
|...-+||+-||.+.+.+. ....+..|+.+|+.|.-++++.. |...+++....--..+...+.++...+ ...
T Consensus 11 g~~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l-~~g 89 (213)
T COG3571 11 GPAPVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGL-AEG 89 (213)
T ss_pred CCCCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcc-cCC
Confidence 4434578889999876655 67888999999999999998754 322222222223456677778888888 778
Q ss_pred cEEEEEechhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCCcccccc
Q 024065 79 KVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLF 158 (273)
Q Consensus 79 ~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (273)
+.++-|+||||.++.+.+..--..|+++++++-+....+.+.. .
T Consensus 90 pLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKPe~-----~------------------------------- 133 (213)
T COG3571 90 PLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKPEQ-----L------------------------------- 133 (213)
T ss_pred ceeeccccccchHHHHHHHhhcCCcceEEEecCccCCCCCccc-----c-------------------------------
Confidence 9999999999999999988766669999999865433332210 0
Q ss_pred cchhhhhhhhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCCCceEE
Q 024065 159 GREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVM 238 (273)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 238 (273)
....+.-+++|+|+.+|+.|.+-..+.... ....+..+++
T Consensus 134 ---------------------------------------Rt~HL~gl~tPtli~qGtrD~fGtr~~Va~-y~ls~~iev~ 173 (213)
T COG3571 134 ---------------------------------------RTEHLTGLKTPTLITQGTRDEFGTRDEVAG-YALSDPIEVV 173 (213)
T ss_pred ---------------------------------------hhhhccCCCCCeEEeecccccccCHHHHHh-hhcCCceEEE
Confidence 000012238999999999999877665532 2233567999
Q ss_pred EEecCCcccccc----------ChHhHHHHHHHHHhcc
Q 024065 239 EIKGGDHMAMLS----------DPQKLCDCLSQISLNR 266 (273)
Q Consensus 239 ~~~~~gH~~~~~----------~~~~~~~~i~~fl~~~ 266 (273)
+++++.|..--. +-...++.|..|+...
T Consensus 174 wl~~adHDLkp~k~vsgls~~~hL~~~A~~va~~~~~l 211 (213)
T COG3571 174 WLEDADHDLKPRKLVSGLSTADHLKTLAEQVAGWARRL 211 (213)
T ss_pred EeccCccccccccccccccHHHHHHHHHHHHHHHHhhc
Confidence 999999965321 2245567777777654
No 108
>PRK10115 protease 2; Provisional
Probab=99.54 E-value=5.9e-13 Score=112.27 Aligned_cols=106 Identities=16% Similarity=0.189 Sum_probs=79.8
Q ss_pred CCceEEEEccCCCchhh--HHHHHHHHhhCCcEEEEeccCCCCCCCCC-------cCCCcchhhchHHHHHHHHhC-CCC
Q 024065 8 EEKHFVLVHGVNHGAWC--WYKLKARLVAGGHRVTAVDLAASGINMKR-------IEDVHTFHAYSEPLMEVLASL-PAE 77 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~d~~G~G~s~~~-------~~~~~~~~~~~~~l~~~l~~~-~~~ 77 (273)
..|.||++||..+.... |......|.++||.|+.++.||-|.-... .....+++|+++-+..+++.- ...
T Consensus 444 ~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~ 523 (686)
T PRK10115 444 HNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSP 523 (686)
T ss_pred CCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCh
Confidence 36999999998766643 66667788899999999999996554321 111235666665555555442 356
Q ss_pred CcEEEEEechhHHHHHHHHHHCCCccceeEEeeccC
Q 024065 78 EKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFM 113 (273)
Q Consensus 78 ~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~ 113 (273)
+++.+.|.|.||.++..++.++|++++++|...|..
T Consensus 524 ~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~ 559 (686)
T PRK10115 524 SLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFV 559 (686)
T ss_pred HHeEEEEECHHHHHHHHHHhcChhheeEEEecCCch
Confidence 789999999999999999999999999999888764
No 109
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.54 E-value=4.7e-14 Score=100.86 Aligned_cols=209 Identities=16% Similarity=0.068 Sum_probs=129.8
Q ss_pred CceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCC----cC----------------CCcchhhchHHHH
Q 024065 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKR----IE----------------DVHTFHAYSEPLM 68 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~----~~----------------~~~~~~~~~~~l~ 68 (273)
.|.||-.||++++...|..+.. ++..||.|+.+|.||.|.|... +. +.+-+.....|+.
T Consensus 83 ~P~vV~fhGY~g~~g~~~~~l~-wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~ 161 (321)
T COG3458 83 LPAVVQFHGYGGRGGEWHDMLH-WAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAV 161 (321)
T ss_pred cceEEEEeeccCCCCCcccccc-ccccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHH
Confidence 7889999999999988877665 3456899999999999988431 11 1122334455666
Q ss_pred HHHHhC-----CCCCcEEEEEechhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhh
Q 024065 69 EVLASL-----PAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQF 143 (273)
Q Consensus 69 ~~l~~~-----~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (273)
.+++.+ -..+++.+.|.|.||.+++.+++..| +|++++..-|............. ..-
T Consensus 162 ~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~df~r~i~~~~-----------~~~----- 224 (321)
T COG3458 162 RAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLSDFPRAIELAT-----------EGP----- 224 (321)
T ss_pred HHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccccccccchhheeecc-----------cCc-----
Confidence 655554 25578999999999999999998776 89999988776442221110000 000
Q ss_pred hhccCCCCCcccccccchhhhhhhhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHH
Q 024065 144 SQCDASNPSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQ 223 (273)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~ 223 (273)
...+...+....+. ..+.... +.-.+......++++|+|+..|-.|++||+.
T Consensus 225 ----------------ydei~~y~k~h~~~-e~~v~~T-----------L~yfD~~n~A~RiK~pvL~svgL~D~vcpPs 276 (321)
T COG3458 225 ----------------YDEIQTYFKRHDPK-EAEVFET-----------LSYFDIVNLAARIKVPVLMSVGLMDPVCPPS 276 (321)
T ss_pred ----------------HHHHHHHHHhcCch-HHHHHHH-----------HhhhhhhhHHHhhccceEEeecccCCCCCCh
Confidence 00011111111111 1111100 0111111123445999999999999999999
Q ss_pred HHHHHHHhCCC-ceEEEEecCCccccccChHhHHHHHHHHHhcc
Q 024065 224 FQHWMIQNYPV-NEVMEIKGGDHMAMLSDPQKLCDCLSQISLNR 266 (273)
Q Consensus 224 ~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 266 (273)
.+-.+.+.++. .++.+++.-+|.-. |.-..+.+..|++..
T Consensus 277 tqFA~yN~l~~~K~i~iy~~~aHe~~---p~~~~~~~~~~l~~l 317 (321)
T COG3458 277 TQFAAYNALTTSKTIEIYPYFAHEGG---PGFQSRQQVHFLKIL 317 (321)
T ss_pred hhHHHhhcccCCceEEEeeccccccC---cchhHHHHHHHHHhh
Confidence 99888888864 46778887677544 444455566666654
No 110
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.53 E-value=1.4e-12 Score=87.63 Aligned_cols=174 Identities=15% Similarity=0.157 Sum_probs=115.0
Q ss_pred CceEEEEccCCCchh-hHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEech
Q 024065 9 EKHFVLVHGVNHGAW-CWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSL 87 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~-~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~ 87 (273)
.+.+|++||+.++.. .|....+.-. -.+-.+++.. -.....+++++.+.+.+... .++++||+||+
T Consensus 2 ~~~~lIVpG~~~Sg~~HWq~~we~~l---~~a~rveq~~--------w~~P~~~dWi~~l~~~v~a~--~~~~vlVAHSL 68 (181)
T COG3545 2 MTDVLIVPGYGGSGPNHWQSRWESAL---PNARRVEQDD--------WEAPVLDDWIARLEKEVNAA--EGPVVLVAHSL 68 (181)
T ss_pred CceEEEecCCCCCChhHHHHHHHhhC---ccchhcccCC--------CCCCCHHHHHHHHHHHHhcc--CCCeEEEEecc
Confidence 457899999976664 3765443211 1133333321 12247889998888888887 25699999999
Q ss_pred hHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCCcccccccchhhhhhh
Q 024065 88 GGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKI 167 (273)
Q Consensus 88 Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (273)
|+..+++++.+....|+|++|++|+-....... ......+.
T Consensus 69 Gc~~v~h~~~~~~~~V~GalLVAppd~~~~~~~-------------------~~~~~tf~-------------------- 109 (181)
T COG3545 69 GCATVAHWAEHIQRQVAGALLVAPPDVSRPEIR-------------------PKHLMTFD-------------------- 109 (181)
T ss_pred cHHHHHHHHHhhhhccceEEEecCCCccccccc-------------------hhhccccC--------------------
Confidence 999999999988889999999998632111000 00000000
Q ss_pred hcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCCCceEEEEecCCccc
Q 024065 168 YQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDHMA 247 (273)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 247 (273)
... .....-|.+++..++|++++.+.++.+++.++ ..++.+.++||+-
T Consensus 110 ------------------------------~~p-~~~lpfps~vvaSrnDp~~~~~~a~~~a~~wg-s~lv~~g~~GHiN 157 (181)
T COG3545 110 ------------------------------PIP-REPLPFPSVVVASRNDPYVSYEHAEDLANAWG-SALVDVGEGGHIN 157 (181)
T ss_pred ------------------------------CCc-cccCCCceeEEEecCCCCCCHHHHHHHHHhcc-Hhheecccccccc
Confidence 000 00114589999999999999999999999985 5788888899975
Q ss_pred ccc---ChHhHHHHHHHHHhcc
Q 024065 248 MLS---DPQKLCDCLSQISLNR 266 (273)
Q Consensus 248 ~~~---~~~~~~~~i~~fl~~~ 266 (273)
-.+ .=.+....+.+|+.+.
T Consensus 158 ~~sG~g~wpeg~~~l~~~~s~~ 179 (181)
T COG3545 158 AESGFGPWPEGYALLAQLLSRA 179 (181)
T ss_pred hhhcCCCcHHHHHHHHHHhhhh
Confidence 443 2255667777776543
No 111
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.52 E-value=1.6e-12 Score=97.84 Aligned_cols=239 Identities=15% Similarity=0.132 Sum_probs=131.0
Q ss_pred CCCceEEEEccCCCchhhHH-HH-HHHHhhCCcEEEEeccCCCCCCCCCcCCC---cchhhc-------hHH---HHHHH
Q 024065 7 MEEKHFVLVHGVNHGAWCWY-KL-KARLVAGGHRVTAVDLAASGINMKRIEDV---HTFHAY-------SEP---LMEVL 71 (273)
Q Consensus 7 ~~~~~vv~lhG~~~~~~~~~-~~-~~~l~~~g~~vi~~d~~G~G~s~~~~~~~---~~~~~~-------~~~---l~~~l 71 (273)
..+|.+|.++|.|......+ .+ +..|.++|+..+.+..|-||.-.+..... .++.|+ +.+ +..++
T Consensus 90 ~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl 169 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWL 169 (348)
T ss_pred CCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHH
Confidence 34788899999887444333 34 77888889999999999999775443211 122221 222 33344
Q ss_pred HhCCCCCcEEEEEechhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhcc--C-
Q 024065 72 ASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCD--A- 148 (273)
Q Consensus 72 ~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~- 148 (273)
+.. +..++.+.|.||||.+|...|...|..|..+-++++........ ..... ..-.|......... .
T Consensus 170 ~~~-G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt-----~Gvls----~~i~W~~L~~q~~~~~~~ 239 (348)
T PF09752_consen 170 ERE-GYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFT-----EGVLS----NSINWDALEKQFEDTVYE 239 (348)
T ss_pred Hhc-CCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchh-----hhhhh----cCCCHHHHHHHhcccchh
Confidence 444 88899999999999999999999998877666666543221111 00000 00111111100000 0
Q ss_pred CCCCcccccccchhhhhhhhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHH
Q 024065 149 SNPSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWM 228 (273)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~ 228 (273)
..................-......+........+ ..+........... .-.+.++.+++|..+|......+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~Ea~~~m~~~m-------d~~T~l~nf~~P~d-p~~ii~V~A~~DaYVPr~~v~~L 311 (348)
T PF09752_consen 240 EEISDIPAQNKSLPLDSMEERRRDREALRFMRGVM-------DSFTHLTNFPVPVD-PSAIIFVAAKNDAYVPRHGVLSL 311 (348)
T ss_pred hhhcccccCcccccchhhccccchHHHHHHHHHHH-------HhhccccccCCCCC-CCcEEEEEecCceEechhhcchH
Confidence 00000000000000000000000011111111100 11111111111111 33588999999999999998899
Q ss_pred HHhCCCceEEEEecCCccc-cccChHhHHHHHHHHHh
Q 024065 229 IQNYPVNEVMEIKGGDHMA-MLSDPQKLCDCLSQISL 264 (273)
Q Consensus 229 ~~~~~~~~~~~~~~~gH~~-~~~~~~~~~~~i~~fl~ 264 (273)
.+..|++++..++ +||.- ++-+.+.+.++|.+-++
T Consensus 312 q~~WPGsEvR~l~-gGHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 312 QEIWPGSEVRYLP-GGHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred HHhCCCCeEEEec-CCcEEEeeechHHHHHHHHHHhh
Confidence 9999999999999 59954 55678899999988765
No 112
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.51 E-value=1.3e-12 Score=95.09 Aligned_cols=103 Identities=23% Similarity=0.188 Sum_probs=73.6
Q ss_pred CceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHh-C-----CCCCcEEE
Q 024065 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLAS-L-----PAEEKVIL 82 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~-~-----~~~~~~~l 82 (273)
=|.|||+||+......|..+.++++.+||-|+.+|+...+...... +..+..+.++.+.+=++. + .+..++.|
T Consensus 17 yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~~-~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l 95 (259)
T PF12740_consen 17 YPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDDTD-EVASAAEVIDWLAKGLESKLPLGVKPDFSKLAL 95 (259)
T ss_pred cCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCcch-hHHHHHHHHHHHHhcchhhccccccccccceEE
Confidence 7899999999988888999999999999999999966533311110 111222222222221111 1 14568999
Q ss_pred EEechhHHHHHHHHHHC-----CCccceeEEeecc
Q 024065 83 VGHSLGGVTLALAADKF-----PHKISVAVFVTAF 112 (273)
Q Consensus 83 vG~S~Gg~~a~~~a~~~-----p~~v~~lil~~~~ 112 (273)
.|||-||-+|..++..+ +.+++++++++|.
T Consensus 96 ~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPV 130 (259)
T PF12740_consen 96 AGHSRGGKVAFAMALGNASSSLDLRFSALILLDPV 130 (259)
T ss_pred eeeCCCCHHHHHHHhhhcccccccceeEEEEeccc
Confidence 99999999999999887 5689999999986
No 113
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.48 E-value=9.8e-13 Score=96.06 Aligned_cols=94 Identities=23% Similarity=0.294 Sum_probs=61.1
Q ss_pred EEEEccCC---CchhhHHHHHHHHhh-CCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhC--------CCCCc
Q 024065 12 FVLVHGVN---HGAWCWYKLKARLVA-GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL--------PAEEK 79 (273)
Q Consensus 12 vv~lhG~~---~~~~~~~~~~~~l~~-~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~--------~~~~~ 79 (273)
||++||.+ ++......+...+++ .|+.|+.+|+|=... .++.+..+|+.+.++.+ .+.++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~--------~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~ 72 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPE--------APFPAALEDVKAAYRWLLKNADKLGIDPER 72 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTT--------SSTTHHHHHHHHHHHHHHHTHHHHTEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccccc--------ccccccccccccceeeeccccccccccccc
Confidence 79999986 333444556666664 799999999994221 24444445544444333 14579
Q ss_pred EEEEEechhHHHHHHHHHHCCC----ccceeEEeeccC
Q 024065 80 VILVGHSLGGVTLALAADKFPH----KISVAVFVTAFM 113 (273)
Q Consensus 80 ~~lvG~S~Gg~~a~~~a~~~p~----~v~~lil~~~~~ 113 (273)
++++|+|.||.+++.++....+ .++++++++|..
T Consensus 73 i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~ 110 (211)
T PF07859_consen 73 IVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWT 110 (211)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHS
T ss_pred eEEeecccccchhhhhhhhhhhhcccchhhhhcccccc
Confidence 9999999999999998875433 489999999854
No 114
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.47 E-value=9.8e-13 Score=95.80 Aligned_cols=105 Identities=20% Similarity=0.218 Sum_probs=71.4
Q ss_pred CCceEEEEccCCCchhhHHHHHHHHhh--------CCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHh----C-
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLKARLVA--------GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLAS----L- 74 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~~~l~~--------~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~----~- 74 (273)
++.||||+||.+++...|+.+...+.+ ..++++++|+......-.. ..+.+.++.+.+.++. .
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g----~~l~~q~~~~~~~i~~i~~~~~ 78 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHG----RTLQRQAEFLAEAIKYILELYK 78 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCcccccccc----ccHHHHHHHHHHHHHHHHHhhh
Confidence 378999999999999999888776632 2478999998754222111 1333333333333322 2
Q ss_pred ---CCCCcEEEEEechhHHHHHHHHHHCC---CccceeEEeeccCCCC
Q 024065 75 ---PAEEKVILVGHSLGGVTLALAADKFP---HKISVAVFVTAFMPDT 116 (273)
Q Consensus 75 ---~~~~~~~lvG~S~Gg~~a~~~a~~~p---~~v~~lil~~~~~~~~ 116 (273)
.+.+++++|||||||.+|..++...+ +.|+.+|.++++....
T Consensus 79 ~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~ 126 (225)
T PF07819_consen 79 SNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGS 126 (225)
T ss_pred hccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCc
Confidence 36689999999999999988876543 4799999999875433
No 115
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.47 E-value=5.1e-12 Score=92.96 Aligned_cols=204 Identities=16% Similarity=0.179 Sum_probs=118.0
Q ss_pred CCceEEEEccCCCchhhHHHHHHHHh-hCCc--EEEE--eccCCC----CCCC---CCc-------CCC-cchhhchHHH
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLKARLV-AGGH--RVTA--VDLAAS----GINM---KRI-------EDV-HTFHAYSEPL 67 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~~~l~-~~g~--~vi~--~d~~G~----G~s~---~~~-------~~~-~~~~~~~~~l 67 (273)
...|.||+||++++...+..++..+. ++|. .++. ++--|+ |.=+ ..+ ... .++...++.+
T Consensus 10 ~~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl 89 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWL 89 (255)
T ss_dssp S-EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHH
Confidence 46799999999999999999999997 6543 2333 333232 2211 111 011 2577778888
Q ss_pred HHHHHhC---CCCCcEEEEEechhHHHHHHHHHHCCC-----ccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccch
Q 024065 68 MEVLASL---PAEEKVILVGHSLGGVTLALAADKFPH-----KISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWL 139 (273)
Q Consensus 68 ~~~l~~~---~~~~~~~lvG~S~Gg~~a~~~a~~~p~-----~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (273)
..++..| .+.+++.+|||||||..++.|+..+.. ++.++|.++++........... .. .
T Consensus 90 ~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~--~~--------~--- 156 (255)
T PF06028_consen 90 KKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQ--NQ--------N--- 156 (255)
T ss_dssp HHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-T--TT--------T---
T ss_pred HHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccc--hh--------h---
Confidence 8877776 478899999999999999999887642 5899999998644322111000 00 0
Q ss_pred hhhhhhccCCCCCcccccccchhhhhhhhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeec----
Q 024065 140 DTQFSQCDASNPSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCE---- 215 (273)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~---- 215 (273)
.. . ... +. ........+... .+.. .. .++.||-|.|.
T Consensus 157 ----~~-~--~~g-------p~------------~~~~~y~~l~~~-------~~~~-----~p-~~i~VLnI~G~~~~g 197 (255)
T PF06028_consen 157 ----DL-N--KNG-------PK------------SMTPMYQDLLKN-------RRKN-----FP-KNIQVLNIYGDLEDG 197 (255)
T ss_dssp -----C-S--TT--------BS------------S--HHHHHHHHT-------HGGG-----ST-TT-EEEEEEEESBTT
T ss_pred ----hh-c--ccC-------Cc------------ccCHHHHHHHHH-------HHhh-----CC-CCeEEEEEecccCCC
Confidence 00 0 000 00 000111111100 0000 01 17889999999
Q ss_pred --CCCCCCHHHHHHHHHhCCC----ceEEEEec--CCccccccChHhHHHHHHHHHh
Q 024065 216 --EDIGLPKQFQHWMIQNYPV----NEVMEIKG--GDHMAMLSDPQKLCDCLSQISL 264 (273)
Q Consensus 216 --~D~~~~~~~~~~~~~~~~~----~~~~~~~~--~gH~~~~~~~~~~~~~i~~fl~ 264 (273)
.|..+|...+..+...+.+ .+-.++.| +.|.-..|++ ++.+.|.+||=
T Consensus 198 ~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~-~V~~~I~~FLw 253 (255)
T PF06028_consen 198 SNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENP-QVDKLIIQFLW 253 (255)
T ss_dssp CSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCH-HHHHHHHHHHC
T ss_pred CCCCeEEeHHHHHHHHHHhhcccCceEEEEEECCCCccccCCCCH-HHHHHHHHHhc
Confidence 7999999988877777643 35556654 6898877766 56689999873
No 116
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.47 E-value=3.6e-12 Score=99.14 Aligned_cols=257 Identities=15% Similarity=0.107 Sum_probs=145.3
Q ss_pred CCCceEEEEccCCCchhhH------HHHHHHHhhCCcEEEEeccCCCCCCCCCc---------CCCcchhhch-HHHHHH
Q 024065 7 MEEKHFVLVHGVNHGAWCW------YKLKARLVAGGHRVTAVDLAASGINMKRI---------EDVHTFHAYS-EPLMEV 70 (273)
Q Consensus 7 ~~~~~vv~lhG~~~~~~~~------~~~~~~l~~~g~~vi~~d~~G~G~s~~~~---------~~~~~~~~~~-~~l~~~ 70 (273)
..+|+|++.||+.+++..| ..++-.|+++||.|+.-+.||-..|.+.. --.+++.+++ -||-+.
T Consensus 71 ~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~ 150 (403)
T KOG2624|consen 71 KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAM 150 (403)
T ss_pred CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHH
Confidence 4589999999999999999 34566788999999999999976664311 1234666653 345555
Q ss_pred HHhC---CCCCcEEEEEechhHHHHHHHHHHCCC---ccceeEEeeccCCCCCCCcchhHhhhhhhccC---------CC
Q 024065 71 LASL---PAEEKVILVGHSLGGVTLALAADKFPH---KISVAVFVTAFMPDTTHRPSFVLEQYSEKMGK---------ED 135 (273)
Q Consensus 71 l~~~---~~~~~~~lvG~S~Gg~~a~~~a~~~p~---~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 135 (273)
++.+ .+.++++.||||.|+.....++...|+ +|+..++++|........ .....+...... ..
T Consensus 151 IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~k~~~--~~~~~~~~~~~~~~~~~~~~fg~ 228 (403)
T KOG2624|consen 151 IDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFPKHIK--SLLNKFLDPFLGAFSLLPLLFGR 228 (403)
T ss_pred HHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhhcccc--cHHHHhhhhhhhhhhHHHHhcCC
Confidence 4444 377899999999999999999988875 799999999876322110 011111100000 00
Q ss_pred ccchhh------hhhhccCCCCCcccccccchhhhh----------------hhh---cCCCchhHHHhhhhccCCcccc
Q 024065 136 DSWLDT------QFSQCDASNPSHISMLFGREFLTI----------------KIY---QLCPPEDLELAKMLVRPGSMFI 190 (273)
Q Consensus 136 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~---~~~~~~~~~~~~~~~~~~~~~~ 190 (273)
..++.. .....- ........+...++.. .+. ...+........+..+......
T Consensus 229 ~~f~p~~~~~~~~~~~~C--~~~~~~~~lC~~~~~~~~G~~~~~~n~~~~~~~~~h~pagtSvk~~~H~~Q~~~s~~f~~ 306 (403)
T KOG2624|consen 229 KEFLPSNLFIKKFARKIC--SGSKIFADLCSNFLFLLVGWNSNNWNTTLLPVYLAHLPAGTSVKNIVHWAQIVRSGKFRK 306 (403)
T ss_pred ccccchhhHHHHHHHHHh--cchhHHHHHHHHHHHHHcCcchHhhhhcccchhhccCCCCccHHHHHHHHHHhcCCCccc
Confidence 000000 000000 0000000000000000 000 0001111111111111111110
Q ss_pred c---------cc-cccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCCCceEEE---EecCCccccc---cChHh
Q 024065 191 D---------NL-SKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVME---IKGGDHMAML---SDPQK 254 (273)
Q Consensus 191 ~---------~~-~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~---~~~~gH~~~~---~~~~~ 254 (273)
. .+ ....+......+++|+.+.+|++|.++.++....+....+++.... +++-.|+-++ +-+++
T Consensus 307 yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~~~~~~~~~~~~~~~~~~ynHlDFi~g~da~~~ 386 (403)
T KOG2624|consen 307 YDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDVLILLLVLPNSVIKYIVPIPEYNHLDFIWGLDAKEE 386 (403)
T ss_pred cCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHHHHHHHhcccccccccccCCCccceeeeeccCcHHH
Confidence 0 01 1122333456669999999999999999999998887777664432 7888897654 45788
Q ss_pred HHHHHHHHHhccc
Q 024065 255 LCDCLSQISLNRH 267 (273)
Q Consensus 255 ~~~~i~~fl~~~~ 267 (273)
+.+.|.+.++...
T Consensus 387 vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 387 VYDPVIERLRLFE 399 (403)
T ss_pred HHHHHHHHHHhhh
Confidence 9999988887654
No 117
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.46 E-value=6.4e-12 Score=87.65 Aligned_cols=60 Identities=17% Similarity=0.234 Sum_probs=48.8
Q ss_pred ccceEEEEeecCCCCCCHHHHHHHHHhCCCceEEEEecCCccccccCh--HhHHHHHHHHHhc
Q 024065 205 GSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDHMAMLSDP--QKLCDCLSQISLN 265 (273)
Q Consensus 205 ~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~--~~~~~~i~~fl~~ 265 (273)
+++|.|.|.|+.|.++|......|++.+++..+..-+ +||+++..++ +.+.+.|.+++++
T Consensus 162 i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a~vl~Hp-ggH~VP~~~~~~~~i~~fi~~~~~~ 223 (230)
T KOG2551|consen 162 LSTPSLHIFGETDTIVPSERSEQLAESFKDATVLEHP-GGHIVPNKAKYKEKIADFIQSFLQE 223 (230)
T ss_pred CCCCeeEEecccceeecchHHHHHHHhcCCCeEEecC-CCccCCCchHHHHHHHHHHHHHHHh
Confidence 3999999999999999999999999999999777777 9999988764 4455555555443
No 118
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.45 E-value=1e-11 Score=105.66 Aligned_cols=84 Identities=17% Similarity=0.072 Sum_probs=66.4
Q ss_pred HHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCC-------------------CCCcEEEEEech
Q 024065 27 KLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP-------------------AEEKVILVGHSL 87 (273)
Q Consensus 27 ~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~-------------------~~~~~~lvG~S~ 87 (273)
.+.+.+.++||.|+..|.||+|.|+..... .. .+-.+|..++|+.+. ..++|.++|.|+
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~-~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY 347 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPTT-GD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSY 347 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCcc-CC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcH
Confidence 355788899999999999999999876431 11 344566666666662 157999999999
Q ss_pred hHHHHHHHHHHCCCccceeEEeecc
Q 024065 88 GGVTLALAADKFPHKISVAVFVTAF 112 (273)
Q Consensus 88 Gg~~a~~~a~~~p~~v~~lil~~~~ 112 (273)
||.+++.+|...|..++++|..++.
T Consensus 348 ~G~~~~~aAa~~pp~LkAIVp~a~i 372 (767)
T PRK05371 348 LGTLPNAVATTGVEGLETIIPEAAI 372 (767)
T ss_pred HHHHHHHHHhhCCCcceEEEeeCCC
Confidence 9999999999999899999987765
No 119
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.43 E-value=1.2e-12 Score=94.93 Aligned_cols=163 Identities=18% Similarity=0.184 Sum_probs=85.4
Q ss_pred CCceEEEEccCCCchhhHHHHH----HHHhhCCcEEEEeccCCC-----CCCCC---------CcC-------------C
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLK----ARLVAGGHRVTAVDLAAS-----GINMK---------RIE-------------D 56 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~----~~l~~~g~~vi~~d~~G~-----G~s~~---------~~~-------------~ 56 (273)
.++.||||||+++++..++... ..|.+.++..+.+|-|-- |-... ... .
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 3789999999999999986544 455542588888875421 11100 000 0
Q ss_pred CcchhhchHHHHHHHHhCCCCCc-EEEEEechhHHHHHHHHHHC--------CCccceeEEeeccCCCCCCCcchhHhhh
Q 024065 57 VHTFHAYSEPLMEVLASLPAEEK-VILVGHSLGGVTLALAADKF--------PHKISVAVFVTAFMPDTTHRPSFVLEQY 127 (273)
Q Consensus 57 ~~~~~~~~~~l~~~l~~~~~~~~-~~lvG~S~Gg~~a~~~a~~~--------p~~v~~lil~~~~~~~~~~~~~~~~~~~ 127 (273)
...+++..+.+.+.++.. .+ ..|+|+|.||.+|..++... ...++-+|++++..+....
T Consensus 83 ~~~~~~sl~~l~~~i~~~---GPfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~--------- 150 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEEN---GPFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD--------- 150 (212)
T ss_dssp G---HHHHHHHHHHHHHH------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE----------
T ss_pred ccCHHHHHHHHHHHHHhc---CCeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh---------
Confidence 123444455555556554 34 45999999999998887532 1246778888875331000
Q ss_pred hhhccCCCccchhhhhhhccCCCCCcccccccchhhhhhhhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccc
Q 024065 128 SEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSV 207 (273)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (273)
. .. ......+++
T Consensus 151 -------------------------------------------------------~-------~~------~~~~~~i~i 162 (212)
T PF03959_consen 151 -------------------------------------------------------Y-------QE------LYDEPKISI 162 (212)
T ss_dssp -------------------------------------------------------G-------TT------TT--TT---
T ss_pred -------------------------------------------------------h-------hh------hhccccCCC
Confidence 0 00 001223489
Q ss_pred eEEEEeecCCCCCCHHHHHHHHHhCCC-ceEEEEecCCccccccC
Q 024065 208 KRVYLVCEEDIGLPKQFQHWMIQNYPV-NEVMEIKGGDHMAMLSD 251 (273)
Q Consensus 208 Pvl~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~ 251 (273)
|+|.|+|++|.+++++..+.+.+.+.+ .+++..+ +||.++...
T Consensus 163 PtlHv~G~~D~~~~~~~s~~L~~~~~~~~~v~~h~-gGH~vP~~~ 206 (212)
T PF03959_consen 163 PTLHVIGENDPVVPPERSEALAEMFDPDARVIEHD-GGHHVPRKK 206 (212)
T ss_dssp EEEEEEETT-SSS-HHHHHHHHHHHHHHEEEEEES-SSSS----H
T ss_pred CeEEEEeCCCCCcchHHHHHHHHhccCCcEEEEEC-CCCcCcCCh
Confidence 999999999999999999999988877 7777777 899887653
No 120
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.41 E-value=1.1e-11 Score=88.64 Aligned_cols=106 Identities=23% Similarity=0.225 Sum_probs=75.6
Q ss_pred cCCCCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhC------CCCC
Q 024065 5 VGMEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL------PAEE 78 (273)
Q Consensus 5 ~g~~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~------~~~~ 78 (273)
.|. =|.|+|+||+.-....|..+..+++.+||-|+++++-.- .......+..+....++.+..-++++ .+..
T Consensus 43 ~G~-yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~-~~p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~ 120 (307)
T PF07224_consen 43 AGT-YPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTL-FPPDGQDEIKSAASVINWLPEGLQHVLPENVEANLS 120 (307)
T ss_pred CCC-ccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcc-cCCCchHHHHHHHHHHHHHHhhhhhhCCCCcccccc
Confidence 344 689999999999999999999999999999999998642 11111111122333333343333333 3557
Q ss_pred cEEEEEechhHHHHHHHHHHCC--CccceeEEeecc
Q 024065 79 KVILVGHSLGGVTLALAADKFP--HKISVAVFVTAF 112 (273)
Q Consensus 79 ~~~lvG~S~Gg~~a~~~a~~~p--~~v~~lil~~~~ 112 (273)
++.++|||.||-.|..+|..+. -.+.++|-++|.
T Consensus 121 klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV 156 (307)
T PF07224_consen 121 KLALSGHSRGGKTAFALALGYATSLKFSALIGIDPV 156 (307)
T ss_pred eEEEeecCCccHHHHHHHhcccccCchhheeccccc
Confidence 8999999999999999998774 257888888876
No 121
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.40 E-value=2.4e-11 Score=87.42 Aligned_cols=106 Identities=16% Similarity=0.096 Sum_probs=68.2
Q ss_pred CCceEEEEccCCCchhhHHHH--HHHHhh-CCcEEEEeccCCCCCCC----C--C--cCCCcchhhchHHHHHHHHhC-C
Q 024065 8 EEKHFVLVHGVNHGAWCWYKL--KARLVA-GGHRVTAVDLAASGINM----K--R--IEDVHTFHAYSEPLMEVLASL-P 75 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~--~~~l~~-~g~~vi~~d~~G~G~s~----~--~--~~~~~~~~~~~~~l~~~l~~~-~ 75 (273)
..|.||++||.+++...+... ...|++ +||-|+.++........ . . .....+...++..+..+..+. -
T Consensus 15 ~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~i 94 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNI 94 (220)
T ss_pred CCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhccc
Confidence 368999999999999887542 234444 57888888854211110 0 0 000011222222233333333 2
Q ss_pred CCCcEEEEEechhHHHHHHHHHHCCCccceeEEeeccC
Q 024065 76 AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFM 113 (273)
Q Consensus 76 ~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~ 113 (273)
+..+|++.|+|.||+++..++..+|+.+.++..+++..
T Consensus 95 D~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 95 DPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVP 132 (220)
T ss_pred CCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccc
Confidence 55799999999999999999999999999988888753
No 122
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.37 E-value=1.5e-11 Score=93.14 Aligned_cols=108 Identities=16% Similarity=0.097 Sum_probs=74.3
Q ss_pred CCCCceEEEEccCCCchhh-HHHH---------HHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhC-
Q 024065 6 GMEEKHFVLVHGVNHGAWC-WYKL---------KARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL- 74 (273)
Q Consensus 6 g~~~~~vv~lhG~~~~~~~-~~~~---------~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~- 74 (273)
+..-|+||..|+++.+... .... ...+.++||.|+..|.||.|.|....... ...-++|..++|+.+
T Consensus 17 ~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~--~~~e~~D~~d~I~W~~ 94 (272)
T PF02129_consen 17 GGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM--SPNEAQDGYDTIEWIA 94 (272)
T ss_dssp SSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT--SHHHHHHHHHHHHHHH
T ss_pred CCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC--ChhHHHHHHHHHHHHH
Confidence 3347889999999865412 2111 11388999999999999999998766431 455566666666665
Q ss_pred ---CCCCcEEEEEechhHHHHHHHHHHCCCccceeEEeeccCCC
Q 024065 75 ---PAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPD 115 (273)
Q Consensus 75 ---~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~ 115 (273)
-...+|.++|.|++|..++.+|...|..+++++...+....
T Consensus 95 ~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~ 138 (272)
T PF02129_consen 95 AQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDL 138 (272)
T ss_dssp HCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBT
T ss_pred hCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcc
Confidence 23458999999999999999999888899999988775443
No 123
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.36 E-value=5.7e-11 Score=84.21 Aligned_cols=245 Identities=13% Similarity=0.171 Sum_probs=142.6
Q ss_pred cCCCCceEEEEccCCCchhhHHHHHHHHhhC---CcEEEEeccCCCCCCC---C-----CcCCCcchhhchHHHHHHHHh
Q 024065 5 VGMEEKHFVLVHGVNHGAWCWYKLKARLVAG---GHRVTAVDLAASGINM---K-----RIEDVHTFHAYSEPLMEVLAS 73 (273)
Q Consensus 5 ~g~~~~~vv~lhG~~~~~~~~~~~~~~l~~~---g~~vi~~d~~G~G~s~---~-----~~~~~~~~~~~~~~l~~~l~~ 73 (273)
.+..++.+++++|.++....|..++..|... .+.++.+-..||-.-+ . ...+.++++++++.-.++++.
T Consensus 25 ~~~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~ 104 (301)
T KOG3975|consen 25 SGEDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKE 104 (301)
T ss_pred CCCCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHH
Confidence 3456889999999999999999888877653 1568888888876543 1 112457899999998999987
Q ss_pred C-CCCCcEEEEEechhHHHHHHHHHHCC--CccceeEEeeccCCCCCCCcch-hHhhhhhhccCCCccchhhhhhhccCC
Q 024065 74 L-PAEEKVILVGHSLGGVTLALAADKFP--HKISVAVFVTAFMPDTTHRPSF-VLEQYSEKMGKEDDSWLDTQFSQCDAS 149 (273)
Q Consensus 74 ~-~~~~~~~lvG~S~Gg~~a~~~a~~~p--~~v~~lil~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (273)
. +...+++++|||-|+.+.+....... -.|.+++++-|.+-....++.. .+..... ++........
T Consensus 105 ~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~--------~~~hv~~lt~-- 174 (301)
T KOG3975|consen 105 YVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLR--------YLPHVVSLTS-- 174 (301)
T ss_pred hCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeee--------eehhhhheee--
Confidence 6 66789999999999999999886432 3588888887765433333211 1111000 0000000000
Q ss_pred CCCcccccccchhhhhhhh----c-CCCch-hHHHhhhhccC----Cccc--cccccccCcC--CccCcccceEEEEeec
Q 024065 150 NPSHISMLFGREFLTIKIY----Q-LCPPE-DLELAKMLVRP----GSMF--IDNLSKESKF--SDEGYGSVKRVYLVCE 215 (273)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~----~-~~~~~-~~~~~~~~~~~----~~~~--~~~~~~~~~~--~~~~~~~~Pvl~i~g~ 215 (273)
.....+.+.+.+..+. . ...+. .......+..+ .... .+.+...... .....--+-+.+.+|.
T Consensus 175 ---yi~~~~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~~d~e~~een~d~l~Fyygt 251 (301)
T KOG3975|consen 175 ---YIYWILLPGFIRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTTRDIEYCEENLDSLWFYYGT 251 (301)
T ss_pred ---eeeeecChHHHHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHHhHHHHHHhcCcEEEEEccC
Confidence 0011111222211110 0 00000 00000000000 0000 0011100000 0011114568899999
Q ss_pred CCCCCCHHHHHHHHHhCCCc--eEEEEecCCccccccChHhHHHHHHHHH
Q 024065 216 EDIGLPKQFQHWMIQNYPVN--EVMEIKGGDHMAMLSDPQKLCDCLSQIS 263 (273)
Q Consensus 216 ~D~~~~~~~~~~~~~~~~~~--~~~~~~~~gH~~~~~~~~~~~~~i~~fl 263 (273)
.|.+||.+....+.+.+|.. ++-+ +++.|.+...+.+..+..+.+.+
T Consensus 252 ~DgW~p~~~~d~~kdd~~eed~~Lde-dki~HAFV~~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 252 NDGWVPSHYYDYYKDDVPEEDLKLDE-DKIPHAFVVKHAQYMANAVFDMI 300 (301)
T ss_pred CCCCcchHHHHHHhhhcchhceeecc-ccCCcceeecccHHHHHHHHHhh
Confidence 99999999999999999865 4444 68999999999998888887765
No 124
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.35 E-value=2.7e-11 Score=97.62 Aligned_cols=107 Identities=16% Similarity=0.123 Sum_probs=74.7
Q ss_pred CCCceEEEEccCCCchhhHHHHHH------------------HHhhCCcEEEEeccC-CCCCCCCCcC-CCcchhhchHH
Q 024065 7 MEEKHFVLVHGVNHGAWCWYKLKA------------------RLVAGGHRVTAVDLA-ASGINMKRIE-DVHTFHAYSEP 66 (273)
Q Consensus 7 ~~~~~vv~lhG~~~~~~~~~~~~~------------------~l~~~g~~vi~~d~~-G~G~s~~~~~-~~~~~~~~~~~ 66 (273)
.+.|.|++++|.++.+..+-.+.+ .+.+. ..++.+|.| |+|.|..... ...+.++.++|
T Consensus 75 ~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~-~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d 153 (462)
T PTZ00472 75 PEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNE-AYVIYVDQPAGVGFSYADKADYDHNESEVSED 153 (462)
T ss_pred CCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccc-cCeEEEeCCCCcCcccCCCCCCCCChHHHHHH
Confidence 457999999999888876533221 12233 689999976 8888865332 22355778888
Q ss_pred HHHHHHhC------CCCCcEEEEEechhHHHHHHHHHHC----------CCccceeEEeeccCC
Q 024065 67 LMEVLASL------PAEEKVILVGHSLGGVTLALAADKF----------PHKISVAVFVTAFMP 114 (273)
Q Consensus 67 l~~~l~~~------~~~~~~~lvG~S~Gg~~a~~~a~~~----------p~~v~~lil~~~~~~ 114 (273)
+.++++.. ....+++|+|||+||.++..+|.+. +-.++++++-++...
T Consensus 154 ~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~d 217 (462)
T PTZ00472 154 MYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTD 217 (462)
T ss_pred HHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccC
Confidence 88888743 1458999999999999887776642 114778888887643
No 125
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.32 E-value=9.5e-11 Score=80.80 Aligned_cols=97 Identities=18% Similarity=0.190 Sum_probs=75.0
Q ss_pred ceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhC---CCCCcEEEEEec
Q 024065 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL---PAEEKVILVGHS 86 (273)
Q Consensus 10 ~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~lvG~S 86 (273)
..+||+-|=++-...=..+++.|+++|+.|+.+|-+-+=.+. -+.++.+.|+.++++.. -+.++++|+|+|
T Consensus 3 t~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~------rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYS 76 (192)
T PF06057_consen 3 TLAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSE------RTPEQTAADLARIIRHYRARWGRKRVVLIGYS 76 (192)
T ss_pred EEEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhh------CCHHHHHHHHHHHHHHHHHHhCCceEEEEeec
Confidence 356777776655444457889999999999999976554443 36677788888777665 367899999999
Q ss_pred hhHHHHHHHHHHCC----CccceeEEeecc
Q 024065 87 LGGVTLALAADKFP----HKISVAVFVTAF 112 (273)
Q Consensus 87 ~Gg~~a~~~a~~~p----~~v~~lil~~~~ 112 (273)
+|+-+.-....+.| ++|+.++|+++.
T Consensus 77 FGADvlP~~~nrLp~~~r~~v~~v~Ll~p~ 106 (192)
T PF06057_consen 77 FGADVLPFIYNRLPAALRARVAQVVLLSPS 106 (192)
T ss_pred CCchhHHHHHhhCCHHHHhheeEEEEeccC
Confidence 99998888887877 478899999875
No 126
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.31 E-value=1.9e-11 Score=84.02 Aligned_cols=196 Identities=14% Similarity=0.133 Sum_probs=115.1
Q ss_pred CCCceEEEEccCC---CchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEE
Q 024065 7 MEEKHFVLVHGVN---HGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILV 83 (273)
Q Consensus 7 ~~~~~vv~lhG~~---~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lv 83 (273)
+..+..||+||.- ++...--..+..+.++||+|..+++ +.+.....-..++.+...-+.-+++.....+.+.+-
T Consensus 65 ~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY---~l~~q~htL~qt~~~~~~gv~filk~~~n~k~l~~g 141 (270)
T KOG4627|consen 65 NQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGY---NLCPQVHTLEQTMTQFTHGVNFILKYTENTKVLTFG 141 (270)
T ss_pred CCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEecc---CcCcccccHHHHHHHHHHHHHHHHHhcccceeEEEc
Confidence 3578899999962 2223333455566678999999865 444332211124444444444455555455667777
Q ss_pred EechhHHHHHHHHHH-CCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCCcccccccchh
Q 024065 84 GHSLGGVTLALAADK-FPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREF 162 (273)
Q Consensus 84 G~S~Gg~~a~~~a~~-~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (273)
|||.|+.+|..+..+ +..+|.++++.++... ++.+...- .. . ...+..
T Consensus 142 GHSaGAHLa~qav~R~r~prI~gl~l~~GvY~---------l~EL~~te---~g----~-------------dlgLt~-- 190 (270)
T KOG4627|consen 142 GHSAGAHLAAQAVMRQRSPRIWGLILLCGVYD---------LRELSNTE---SG----N-------------DLGLTE-- 190 (270)
T ss_pred ccchHHHHHHHHHHHhcCchHHHHHHHhhHhh---------HHHHhCCc---cc----c-------------ccCccc--
Confidence 999999999877654 4458999999887532 11111000 00 0 000000
Q ss_pred hhhhhhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCCCceEEEEec
Q 024065 163 LTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKG 242 (273)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (273)
...+.... .+......++|+|++.|++|.---.+..+.+..+...+++..+++
T Consensus 191 -----------~~ae~~Sc----------------dl~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~~a~~~~f~n 243 (270)
T KOG4627|consen 191 -----------RNAESVSC----------------DLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLRKASFTLFKN 243 (270)
T ss_pred -----------chhhhcCc----------------cHHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhhhcceeecCC
Confidence 00000000 011112238899999999997665677888888888899999999
Q ss_pred CCccccccCh----HhHHHHHHHHH
Q 024065 243 GDHMAMLSDP----QKLCDCLSQIS 263 (273)
Q Consensus 243 ~gH~~~~~~~----~~~~~~i~~fl 263 (273)
.+|+-..++- ..+...++.|+
T Consensus 244 ~~hy~I~~~~~~~~s~~~~~~~~~~ 268 (270)
T KOG4627|consen 244 YDHYDIIEETAIDDSDVSRFLRNIE 268 (270)
T ss_pred cchhhHHHHhccccchHHHHHHHHh
Confidence 9999877643 33444454443
No 127
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.30 E-value=1e-09 Score=83.93 Aligned_cols=221 Identities=18% Similarity=0.155 Sum_probs=121.9
Q ss_pred CCceEEEEccCCC-----chhhHHHHHHHHhh-CCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHh-----CCC
Q 024065 8 EEKHFVLVHGVNH-----GAWCWYKLKARLVA-GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLAS-----LPA 76 (273)
Q Consensus 8 ~~~~vv~lhG~~~-----~~~~~~~~~~~l~~-~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~-----~~~ 76 (273)
..|.||++||.|. +...|+.+...+++ -+.-|+++|+|=--+...| ..++|..+.+..+.++ -.+
T Consensus 89 ~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~P----a~y~D~~~Al~w~~~~~~~~~~~D 164 (336)
T KOG1515|consen 89 KLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFP----AAYDDGWAALKWVLKNSWLKLGAD 164 (336)
T ss_pred CceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCC----ccchHHHHHHHHHHHhHHHHhCCC
Confidence 4789999999862 34557778877754 4678999999843333332 2455555555555553 136
Q ss_pred CCcEEEEEechhHHHHHHHHHHC------CCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCC
Q 024065 77 EEKVILVGHSLGGVTLALAADKF------PHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASN 150 (273)
Q Consensus 77 ~~~~~lvG~S~Gg~~a~~~a~~~------p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (273)
.++++|+|-|.||.+|..+|.+. +-++++.|++-|................ ...
T Consensus 165 ~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~~~-~~~------------------- 224 (336)
T KOG1515|consen 165 PSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQNL-NGS------------------- 224 (336)
T ss_pred cccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHHhh-cCC-------------------
Confidence 67899999999999998887653 3579999999987544333221111000 000
Q ss_pred CCcccccccchhhhhhhhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccc-eEEEEeecCCCCCCHH--HHHH
Q 024065 151 PSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSV-KRVYLVCEEDIGLPKQ--FQHW 227 (273)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Pvl~i~g~~D~~~~~~--~~~~ 227 (273)
...........+....+......... +...... ....+.....+ |+|++.++.|.+.... ..++
T Consensus 225 -----~~~~~~~~~~~w~~~lP~~~~~~~~p-------~~np~~~-~~~~d~~~~~lp~tlv~~ag~D~L~D~~~~Y~~~ 291 (336)
T KOG1515|consen 225 -----PELARPKIDKWWRLLLPNGKTDLDHP-------FINPVGN-SLAKDLSGLGLPPTLVVVAGYDVLRDEGLAYAEK 291 (336)
T ss_pred -----cchhHHHHHHHHHHhCCCCCCCcCCc-------ccccccc-ccccCccccCCCceEEEEeCchhhhhhhHHHHHH
Confidence 00000000000000000000000000 0000100 00011111244 5999999999887433 4556
Q ss_pred HHHhCCCceEEEEecCCccccccCh-----HhHHHHHHHHHhc
Q 024065 228 MIQNYPVNEVMEIKGGDHMAMLSDP-----QKLCDCLSQISLN 265 (273)
Q Consensus 228 ~~~~~~~~~~~~~~~~gH~~~~~~~-----~~~~~~i~~fl~~ 265 (273)
|.+.--.+++..++++.|.++.-.| .++.+.+.+|+++
T Consensus 292 Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~ 334 (336)
T KOG1515|consen 292 LKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKS 334 (336)
T ss_pred HHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhh
Confidence 6555445677789999998776544 4566777777764
No 128
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.30 E-value=4.6e-11 Score=83.45 Aligned_cols=172 Identities=15% Similarity=0.100 Sum_probs=112.9
Q ss_pred eEEEEccCCCchhh-HHHHHHHHhhCCcEEEEeccC-CCCCCCCCcC-------CCcchhhchHHHHHHHHhC---CCCC
Q 024065 11 HFVLVHGVNHGAWC-WYKLKARLVAGGHRVTAVDLA-ASGINMKRIE-------DVHTFHAYSEPLMEVLASL---PAEE 78 (273)
Q Consensus 11 ~vv~lhG~~~~~~~-~~~~~~~l~~~g~~vi~~d~~-G~G~s~~~~~-------~~~~~~~~~~~l~~~l~~~---~~~~ 78 (273)
.||++--+.+.... -+..+..++..||.|+++|+. |--.|..... ...+....-.++..+++.+ ....
T Consensus 41 ~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~~k 120 (242)
T KOG3043|consen 41 VLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGDSK 120 (242)
T ss_pred EEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCCcc
Confidence 55666555444433 678888999999999999975 3112221010 1224444555666665555 2367
Q ss_pred cEEEEEechhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCCcccccc
Q 024065 79 KVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLF 158 (273)
Q Consensus 79 ~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (273)
++-++|++|||.++..+....| .+.+.+.+=|....
T Consensus 121 kIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~d------------------------------------------- 156 (242)
T KOG3043|consen 121 KIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFVD------------------------------------------- 156 (242)
T ss_pred eeeEEEEeecceEEEEeeccch-hheeeeEecCCcCC-------------------------------------------
Confidence 8999999999999888887777 56666655443110
Q ss_pred cchhhhhhhhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCC-----
Q 024065 159 GREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYP----- 233 (273)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~----- 233 (273)
..+...+++|+|++.|+.|.++|++....+.+.+.
T Consensus 157 ----------------------------------------~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~ 196 (242)
T KOG3043|consen 157 ----------------------------------------SADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAV 196 (242)
T ss_pred ----------------------------------------hhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCccc
Confidence 00011128999999999999999998887776653
Q ss_pred CceEEEEecCCccccc-----cCh------HhHHHHHHHHHhcc
Q 024065 234 VNEVMEIKGGDHMAML-----SDP------QKLCDCLSQISLNR 266 (273)
Q Consensus 234 ~~~~~~~~~~gH~~~~-----~~~------~~~~~~i~~fl~~~ 266 (273)
+.+++++++.+|-++- +.| |+..+.+.+|++.+
T Consensus 197 ~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y 240 (242)
T KOG3043|consen 197 GSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHY 240 (242)
T ss_pred ceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHh
Confidence 2369999999997763 233 45566677777654
No 129
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=99.29 E-value=8.9e-11 Score=85.70 Aligned_cols=97 Identities=22% Similarity=0.249 Sum_probs=73.7
Q ss_pred EEccCC--CchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEechhHHH
Q 024065 14 LVHGVN--HGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVT 91 (273)
Q Consensus 14 ~lhG~~--~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg~~ 91 (273)
++|+.+ ++...|..+...|... +.|+++|.+|++.+.... .+++++++.+...+.......+++++|||+||.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~~-~~v~~~~~~g~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~ 77 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRGR-RDVSALPLPGFGPGEPLP---ASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLL 77 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCCC-ccEEEecCCCCCCCCCCC---CCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHH
Confidence 455544 6777899999999875 899999999998765433 3667777766655544425678999999999999
Q ss_pred HHHHHHH---CCCccceeEEeeccCC
Q 024065 92 LALAADK---FPHKISVAVFVTAFMP 114 (273)
Q Consensus 92 a~~~a~~---~p~~v~~lil~~~~~~ 114 (273)
+...+.+ .++.+.+++++++..+
T Consensus 78 a~~~a~~l~~~~~~~~~l~~~~~~~~ 103 (212)
T smart00824 78 AHAVAARLEARGIPPAAVVLLDTYPP 103 (212)
T ss_pred HHHHHHHHHhCCCCCcEEEEEccCCC
Confidence 9988875 4567899998887543
No 130
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.29 E-value=5.5e-10 Score=86.52 Aligned_cols=103 Identities=14% Similarity=0.081 Sum_probs=66.9
Q ss_pred CCceEEEEccCC---CchhhH-HHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhC----CCCCc
Q 024065 8 EEKHFVLVHGVN---HGAWCW-YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL----PAEEK 79 (273)
Q Consensus 8 ~~~~vv~lhG~~---~~~~~~-~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~----~~~~~ 79 (273)
..|+||++||.+ ++.... ..+...+...|+.|+++|+|--.+-..+ ..+++..+-+..+.++. .+.++
T Consensus 78 ~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~~p----~~~~d~~~a~~~l~~~~~~~g~dp~~ 153 (312)
T COG0657 78 TAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHPFP----AALEDAYAAYRWLRANAAELGIDPSR 153 (312)
T ss_pred CCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCCCC----chHHHHHHHHHHHHhhhHhhCCCccc
Confidence 379999999986 334444 4455555667999999999843222111 23334333333333231 13678
Q ss_pred EEEEEechhHHHHHHHHHHCCC----ccceeEEeeccCC
Q 024065 80 VILVGHSLGGVTLALAADKFPH----KISVAVFVTAFMP 114 (273)
Q Consensus 80 ~~lvG~S~Gg~~a~~~a~~~p~----~v~~lil~~~~~~ 114 (273)
+.++|+|.||.+++.++..-.+ .....+++.|...
T Consensus 154 i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d 192 (312)
T COG0657 154 IAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLD 192 (312)
T ss_pred eEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccC
Confidence 9999999999999988865443 4678888887644
No 131
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=99.27 E-value=4.1e-10 Score=88.43 Aligned_cols=80 Identities=20% Similarity=0.229 Sum_probs=59.1
Q ss_pred HHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhC----CCCCcEEEEEechhHHHHHHHHHHCCCcc
Q 024065 28 LKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL----PAEEKVILVGHSLGGVTLALAADKFPHKI 103 (273)
Q Consensus 28 ~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v 103 (273)
+-..| +.|+.|+.+.+. ..+. ..-|+++.+....++++.+ ++..+++|+|.+.||..++.+|+.+|+.+
T Consensus 93 vG~AL-~~GHPvYFV~F~----p~P~--pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~ 165 (581)
T PF11339_consen 93 VGVAL-RAGHPVYFVGFF----PEPE--PGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLV 165 (581)
T ss_pred HHHHH-HcCCCeEEEEec----CCCC--CCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCcc
Confidence 33445 458999888764 1112 2248888877777776665 33459999999999999999999999999
Q ss_pred ceeEEeeccCC
Q 024065 104 SVAVFVTAFMP 114 (273)
Q Consensus 104 ~~lil~~~~~~ 114 (273)
.-+|+-+++..
T Consensus 166 gplvlaGaPls 176 (581)
T PF11339_consen 166 GPLVLAGAPLS 176 (581)
T ss_pred CceeecCCCcc
Confidence 99888876643
No 132
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=99.24 E-value=8.9e-12 Score=89.44 Aligned_cols=100 Identities=24% Similarity=0.226 Sum_probs=58.1
Q ss_pred CceEEEEccCCC-chhhHHHHHHHHhhCCcE---EEEeccCCCCCCCCCcCC---CcchhhchHHHHHHHHhCCCCCcEE
Q 024065 9 EKHFVLVHGVNH-GAWCWYKLKARLVAGGHR---VTAVDLAASGINMKRIED---VHTFHAYSEPLMEVLASLPAEEKVI 81 (273)
Q Consensus 9 ~~~vv~lhG~~~-~~~~~~~~~~~l~~~g~~---vi~~d~~G~G~s~~~~~~---~~~~~~~~~~l~~~l~~~~~~~~~~ 81 (273)
+.||||+||.++ ....|..+.+.|.++||. |+++++-....+...... ..+..++.+.|.++++.- +. +|.
T Consensus 1 ~~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~T-Ga-kVD 78 (219)
T PF01674_consen 1 NRPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYT-GA-KVD 78 (219)
T ss_dssp S--EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHH-T---EE
T ss_pred CCCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhh-CC-EEE
Confidence 358999999998 557799999999999999 899998443332211110 112334555555555555 77 999
Q ss_pred EEEechhHHHHHHHHHHCCCccceeEEeec
Q 024065 82 LVGHSLGGVTLALAADKFPHKISVAVFVTA 111 (273)
Q Consensus 82 lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~ 111 (273)
||||||||.++-.+.... .-++..+-+.+
T Consensus 79 IVgHS~G~~iaR~yi~~~-~~~d~~~~lg~ 107 (219)
T PF01674_consen 79 IVGHSMGGTIARYYIKGG-GGADKVVNLGP 107 (219)
T ss_dssp EEEETCHHHHHHHHHHHC-TGGGTEEE---
T ss_pred EEEcCCcCHHHHHHHHHc-CCCCcccCccc
Confidence 999999999998888644 34444444443
No 133
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.24 E-value=2.1e-10 Score=90.04 Aligned_cols=105 Identities=18% Similarity=0.256 Sum_probs=60.0
Q ss_pred CCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCC------CCC----c--------------CCC-----c
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGIN------MKR----I--------------EDV-----H 58 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s------~~~----~--------------~~~-----~ 58 (273)
.-|.|||-||++++...|..++..|+.+||-|+++|.|..-.+ +.. . ... +
T Consensus 99 ~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (379)
T PF03403_consen 99 KFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEEF 178 (379)
T ss_dssp -EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGHH
T ss_pred CCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhHH
Confidence 3689999999999999999999999999999999999953211 000 0 000 0
Q ss_pred -----chhhchHHHHHHHHhC-----C--------------------CCCcEEEEEechhHHHHHHHHHHCCCccceeEE
Q 024065 59 -----TFHAYSEPLMEVLASL-----P--------------------AEEKVILVGHSLGGVTLALAADKFPHKISVAVF 108 (273)
Q Consensus 59 -----~~~~~~~~l~~~l~~~-----~--------------------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil 108 (273)
-++.-++++..+++.+ + +..++.++|||+||..++..+.+. .+++..|+
T Consensus 179 ~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~ 257 (379)
T PF03403_consen 179 ELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGIL 257 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEEE
Confidence 0011122333333222 0 134689999999999999888665 68999999
Q ss_pred eeccC
Q 024065 109 VTAFM 113 (273)
Q Consensus 109 ~~~~~ 113 (273)
+++..
T Consensus 258 LD~W~ 262 (379)
T PF03403_consen 258 LDPWM 262 (379)
T ss_dssp ES---
T ss_pred eCCcc
Confidence 99863
No 134
>PRK04940 hypothetical protein; Provisional
Probab=99.21 E-value=3.7e-09 Score=72.87 Aligned_cols=170 Identities=11% Similarity=0.040 Sum_probs=94.9
Q ss_pred EEEEccCCCchhh--HHH-HHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhC-C--CCCcEEEEEe
Q 024065 12 FVLVHGVNHGAWC--WYK-LKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL-P--AEEKVILVGH 85 (273)
Q Consensus 12 vv~lhG~~~~~~~--~~~-~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~-~--~~~~~~lvG~ 85 (273)
|+++|||.+++.. ... ....+ .-+.+++ +++ ..+..+-.+.+.+.+..+ . ..+++.|||+
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~~~-~p~~~~~--~l~-----------~~~P~~a~~~l~~~i~~~~~~~~~~~~~liGS 67 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQFI-DPDVRLI--SYS-----------TLHPKHDMQHLLKEVDKMLQLSDDERPLICGV 67 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhheee-CCCCeEE--ECC-----------CCCHHHHHHHHHHHHHHhhhccCCCCcEEEEe
Confidence 7899999998887 422 11122 1123333 221 023344444555555532 1 1257999999
Q ss_pred chhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCCcccccccchhhhh
Q 024065 86 SLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTI 165 (273)
Q Consensus 86 S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (273)
|+||..|..++.++. + ..|+++|.+.+. ..+....... .+ ...+.++.+.
T Consensus 68 SLGGyyA~~La~~~g--~-~aVLiNPAv~P~-----~~L~~~ig~~------------------~~---y~~~~~~h~~- 117 (180)
T PRK04940 68 GLGGYWAERIGFLCG--I-RQVIFNPNLFPE-----ENMEGKIDRP------------------EE---YADIATKCVT- 117 (180)
T ss_pred ChHHHHHHHHHHHHC--C-CEEEECCCCChH-----HHHHHHhCCC------------------cc---hhhhhHHHHH-
Confidence 999999999999986 3 577889875421 1111111000 00 0000000000
Q ss_pred hhhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCCCc-eEEEEecCC
Q 024065 166 KIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVN-EVMEIKGGD 244 (273)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~g 244 (273)
.++ . ...-..+++..+.|.+.+...+.... .++ ++.+.+|+.
T Consensus 118 --------------------------eL~----~----~~p~r~~vllq~gDEvLDyr~a~~~y---~~~y~~~v~~GGd 160 (180)
T PRK04940 118 --------------------------NFR----E----KNRDRCLVILSRNDEVLDSQRTAEEL---HPYYEIVWDEEQT 160 (180)
T ss_pred --------------------------Hhh----h----cCcccEEEEEeCCCcccCHHHHHHHh---ccCceEEEECCCC
Confidence 000 0 00224689999999999877655433 444 788888888
Q ss_pred ccccccChHhHHHHHHHHHh
Q 024065 245 HMAMLSDPQKLCDCLSQISL 264 (273)
Q Consensus 245 H~~~~~~~~~~~~~i~~fl~ 264 (273)
|-+ ++-++....|.+|+.
T Consensus 161 H~f--~~fe~~l~~I~~F~~ 178 (180)
T PRK04940 161 HKF--KNISPHLQRIKAFKT 178 (180)
T ss_pred CCC--CCHHHHHHHHHHHHh
Confidence 864 334567778888875
No 135
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.20 E-value=1.7e-10 Score=83.71 Aligned_cols=50 Identities=30% Similarity=0.399 Sum_probs=37.6
Q ss_pred hHHHHHHHHhCC--CCCcEEEEEechhHHHHHHHHHHCCCccceeEEeeccCC
Q 024065 64 SEPLMEVLASLP--AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMP 114 (273)
Q Consensus 64 ~~~l~~~l~~~~--~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 114 (273)
.+...+++...+ ..+++.|+|.|.||-+|+.+|..+| .|+++|.++|...
T Consensus 6 fe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~ 57 (213)
T PF08840_consen 6 FEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSV 57 (213)
T ss_dssp HHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB
T ss_pred HHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCcee
Confidence 344555555552 2368999999999999999999999 8999999998643
No 136
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=99.20 E-value=6.3e-11 Score=94.13 Aligned_cols=93 Identities=15% Similarity=0.246 Sum_probs=70.2
Q ss_pred CchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCC-CcchhhchHHHHHHHHhCCCCCcEEEEEechhHHHHHHHHHH
Q 024065 20 HGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIED-VHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADK 98 (273)
Q Consensus 20 ~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~-~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~ 98 (273)
.....|..+++.|.+.||.+ ..|++|+|.+-+.... ...++++.+.+.++.+.. +.++++|+||||||.++..++..
T Consensus 105 ~~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~-g~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 105 DEVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKAS-GGKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred chHHHHHHHHHHHHHcCCcc-CCCcccCCCCccccccHHHHHHHHHHHHHHHHHHc-CCCCEEEEEECHhHHHHHHHHHH
Confidence 45678999999999999755 8999999998665321 112344444444555555 77899999999999999999998
Q ss_pred CCCc----cceeEEeeccCC
Q 024065 99 FPHK----ISVAVFVTAFMP 114 (273)
Q Consensus 99 ~p~~----v~~lil~~~~~~ 114 (273)
+|+. |+++|.++++..
T Consensus 183 ~p~~~~k~I~~~I~la~P~~ 202 (440)
T PLN02733 183 HSDVFEKYVNSWIAIAAPFQ 202 (440)
T ss_pred CCHhHHhHhccEEEECCCCC
Confidence 8864 788899987643
No 137
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.20 E-value=4.8e-11 Score=90.31 Aligned_cols=93 Identities=24% Similarity=0.185 Sum_probs=66.2
Q ss_pred CceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCC--CCCCCCcCCC--c---chhhchHHHHHHHHhC-------
Q 024065 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAAS--GINMKRIEDV--H---TFHAYSEPLMEVLASL------- 74 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~--G~s~~~~~~~--~---~~~~~~~~l~~~l~~~------- 74 (273)
-|.||+-||.+++...|..+.+.+++.||-|.++|.+|- |..+...... + -+-+-..|+..+|+.+
T Consensus 71 ~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP 150 (365)
T COG4188 71 LPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTASP 150 (365)
T ss_pred CCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcCc
Confidence 688999999999999999999999999999999999983 3332211110 1 1223344444444333
Q ss_pred -----CCCCcEEEEEechhHHHHHHHHHHCCC
Q 024065 75 -----PAEEKVILVGHSLGGVTLALAADKFPH 101 (273)
Q Consensus 75 -----~~~~~~~lvG~S~Gg~~a~~~a~~~p~ 101 (273)
....+|.++|||+||..+++.+....+
T Consensus 151 ~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 151 ALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred ccccccCccceEEEecccccHHHHHhcccccc
Confidence 134589999999999999998866553
No 138
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=99.18 E-value=5.4e-11 Score=91.42 Aligned_cols=111 Identities=22% Similarity=0.263 Sum_probs=67.5
Q ss_pred CCCceEEEEccCCCch--hhH-HHHHHHH-hh--CCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhC-----C
Q 024065 7 MEEKHFVLVHGVNHGA--WCW-YKLKARL-VA--GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL-----P 75 (273)
Q Consensus 7 ~~~~~vv~lhG~~~~~--~~~-~~~~~~l-~~--~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~-----~ 75 (273)
.++|++|++|||.++. ..| ..+...+ .. .++.||++||..--... -...........+.+..+|..+ .
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~-Y~~a~~n~~~vg~~la~~l~~L~~~~g~ 147 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNN-YPQAVANTRLVGRQLAKFLSFLINNFGV 147 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS--HHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhcccc-ccchhhhHHHHHHHHHHHHHHHHhhcCC
Confidence 3589999999998887 345 3555544 43 47999999996321111 0000112233334444444433 2
Q ss_pred CCCcEEEEEechhHHHHHHHHHHCCC--ccceeEEeeccCCCCCC
Q 024065 76 AEEKVILVGHSLGGVTLALAADKFPH--KISVAVFVTAFMPDTTH 118 (273)
Q Consensus 76 ~~~~~~lvG~S~Gg~~a~~~a~~~p~--~v~~lil~~~~~~~~~~ 118 (273)
..++++|||||+||.+|-.++..... +|.++..++|+.|....
T Consensus 148 ~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~F~~ 192 (331)
T PF00151_consen 148 PPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPLFEN 192 (331)
T ss_dssp -GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TTTTT
T ss_pred ChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccccccC
Confidence 56899999999999999999998887 89999999998776544
No 139
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.17 E-value=4.2e-10 Score=78.21 Aligned_cols=176 Identities=15% Similarity=0.192 Sum_probs=114.1
Q ss_pred CceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCC-----------------CCcCCCcchhhchHHHHHHH
Q 024065 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINM-----------------KRIEDVHTFHAYSEPLMEVL 71 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~-----------------~~~~~~~~~~~~~~~l~~~l 71 (273)
..+||++||.+.+...|..++..|.-++..-|++.-|-.-.+. ....+...+...++.+..++
T Consensus 3 ~atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li 82 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLI 82 (206)
T ss_pred eEEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHH
Confidence 4589999999999999988888876666677777443211110 00002234555566667776
Q ss_pred HhC----CCCCcEEEEEechhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhcc
Q 024065 72 ASL----PAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCD 147 (273)
Q Consensus 72 ~~~----~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (273)
++. -...++.+-|.|+||.+++..+..+|..+.+.+-..+..+..... + ..|..
T Consensus 83 ~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~-------~--------~~~~~------- 140 (206)
T KOG2112|consen 83 DNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIG-------L--------PGWLP------- 140 (206)
T ss_pred HHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchhh-------c--------cCCcc-------
Confidence 665 134578899999999999999999988888877666543311000 0 00000
Q ss_pred CCCCCcccccccchhhhhhhhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHH
Q 024065 148 ASNPSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHW 227 (273)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~ 227 (273)
... ..|++..||+.|+++|....+.
T Consensus 141 ------------------------------------------------------~~~-~~~i~~~Hg~~d~~vp~~~g~~ 165 (206)
T KOG2112|consen 141 ------------------------------------------------------GVN-YTPILLCHGTADPLVPFRFGEK 165 (206)
T ss_pred ------------------------------------------------------ccC-cchhheecccCCceeehHHHHH
Confidence 000 5689999999999999876554
Q ss_pred HHHh----CCCceEEEEecCCccccccChHhHHHHHHHHHhc
Q 024065 228 MIQN----YPVNEVMEIKGGDHMAMLSDPQKLCDCLSQISLN 265 (273)
Q Consensus 228 ~~~~----~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 265 (273)
..+. ...++++.+++.+|...-+ ++ +.+..|+.+
T Consensus 166 s~~~l~~~~~~~~f~~y~g~~h~~~~~---e~-~~~~~~~~~ 203 (206)
T KOG2112|consen 166 SAQFLKSLGVRVTFKPYPGLGHSTSPQ---EL-DDLKSWIKT 203 (206)
T ss_pred HHHHHHHcCCceeeeecCCccccccHH---HH-HHHHHHHHH
Confidence 4433 3347899999999987644 44 345555554
No 140
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.16 E-value=1.4e-09 Score=92.55 Aligned_cols=199 Identities=17% Similarity=0.092 Sum_probs=122.9
Q ss_pred CceEEEEccCCCchhh-------HHHHHHHHhhCCcEEEEeccCCCCCCCCCcC-------CCcchhhchHHHHHHHHhC
Q 024065 9 EKHFVLVHGVNHGAWC-------WYKLKARLVAGGHRVTAVDLAASGINMKRIE-------DVHTFHAYSEPLMEVLASL 74 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~-------~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~-------~~~~~~~~~~~l~~~l~~~ 74 (273)
=|.+|.+||.+++... |... .....|+.|+.+|.||-|....... ....++|+...+..+++..
T Consensus 526 yPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~ 603 (755)
T KOG2100|consen 526 YPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLP 603 (755)
T ss_pred CCEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcc
Confidence 4667778888863221 4333 3566799999999999887654321 2245666666666666554
Q ss_pred -CCCCcEEEEEechhHHHHHHHHHHCCCcccee-EEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCC
Q 024065 75 -PAEEKVILVGHSLGGVTLALAADKFPHKISVA-VFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPS 152 (273)
Q Consensus 75 -~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~l-il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (273)
.+.+++.+.|+|.||.+++..+...|+.+-+. +.++|..... ........
T Consensus 604 ~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~-~yds~~te--------------------------- 655 (755)
T KOG2100|consen 604 FIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL-YYDSTYTE--------------------------- 655 (755)
T ss_pred cccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee-eecccccH---------------------------
Confidence 35678999999999999999999998555544 8888764321 00000000
Q ss_pred cccccccchhhhhhhhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccce-EEEEeecCCCCCCHHHHHHHHHh
Q 024065 153 HISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVK-RVYLVCEEDIGLPKQFQHWMIQN 231 (273)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-vl~i~g~~D~~~~~~~~~~~~~~ 231 (273)
++ ............ ..........++.| .|++||+.|..++.+....+.+.
T Consensus 656 --------ry-----mg~p~~~~~~y~---------------e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~a 707 (755)
T KOG2100|consen 656 --------RY-----MGLPSENDKGYE---------------ESSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKA 707 (755)
T ss_pred --------hh-----cCCCccccchhh---------------hccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHH
Confidence 00 000000000000 00011111222444 49999999999988877666655
Q ss_pred CC----CceEEEEecCCccccccCh-HhHHHHHHHHHhc
Q 024065 232 YP----VNEVMEIKGGDHMAMLSDP-QKLCDCLSQISLN 265 (273)
Q Consensus 232 ~~----~~~~~~~~~~gH~~~~~~~-~~~~~~i~~fl~~ 265 (273)
+. ..+..++|+.+|.+..-.. ..+...+..|+..
T Consensus 708 L~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~ 746 (755)
T KOG2100|consen 708 LQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDRFLRD 746 (755)
T ss_pred HHHCCCceEEEEeCCCCcccccccchHHHHHHHHHHHHH
Confidence 42 2689999999999877554 6677888888873
No 141
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.12 E-value=1.1e-09 Score=83.66 Aligned_cols=103 Identities=20% Similarity=0.110 Sum_probs=61.0
Q ss_pred CCceEEEEccCCCchhhH------------------HHHHHHHhhCCcEEEEeccCCCCCCCCCcCC----Ccchhhc--
Q 024065 8 EEKHFVLVHGVNHGAWCW------------------YKLKARLVAGGHRVTAVDLAASGINMKRIED----VHTFHAY-- 63 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~------------------~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~----~~~~~~~-- 63 (273)
.-|.||++||-+++.+.. ..+..+|+++||-|+++|.+|+|+....... .++...+
T Consensus 114 p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~ 193 (390)
T PF12715_consen 114 PFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALAR 193 (390)
T ss_dssp -EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHH
T ss_pred CCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHH
Confidence 378999999987665331 1357789999999999999999987643321 1111111
Q ss_pred -------------hHHHHHHHHhC---C--CCCcEEEEEechhHHHHHHHHHHCCCccceeEEeec
Q 024065 64 -------------SEPLMEVLASL---P--AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTA 111 (273)
Q Consensus 64 -------------~~~l~~~l~~~---~--~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~ 111 (273)
+-|....++.+ + +.++|.++|+||||..++.+++.. ++|+..|..+.
T Consensus 194 ~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~~ 258 (390)
T PF12715_consen 194 NLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD-DRIKATVANGY 258 (390)
T ss_dssp HHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES-
T ss_pred HHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc-hhhHhHhhhhh
Confidence 11223334443 1 346899999999999999999776 48988876654
No 142
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=99.08 E-value=1.5e-09 Score=79.67 Aligned_cols=108 Identities=17% Similarity=0.178 Sum_probs=69.6
Q ss_pred CCCceEEEEccCCCchhhHH-HHHHHHhhCCc--EEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhC---CCCCcE
Q 024065 7 MEEKHFVLVHGVNHGAWCWY-KLKARLVAGGH--RVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL---PAEEKV 80 (273)
Q Consensus 7 ~~~~~vv~lhG~~~~~~~~~-~~~~~l~~~g~--~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~ 80 (273)
.++..+||+||+..+...-- ..++....-++ .++.+.||+.|.-..-..+..+...-...+.++++.+ .+.+++
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I 95 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKRI 95 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceE
Confidence 35889999999998866532 22222222223 7999999988763221112123344455555555554 267899
Q ss_pred EEEEechhHHHHHHHHHH----CC-----CccceeEEeeccCC
Q 024065 81 ILVGHSLGGVTLALAADK----FP-----HKISVAVFVTAFMP 114 (273)
Q Consensus 81 ~lvG~S~Gg~~a~~~a~~----~p-----~~v~~lil~~~~~~ 114 (273)
+|++||||+.+.+.+... .+ .++..+++++|-.+
T Consensus 96 ~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid 138 (233)
T PF05990_consen 96 HILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDID 138 (233)
T ss_pred EEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCC
Confidence 999999999999887553 21 26788888887543
No 143
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.03 E-value=5e-09 Score=84.22 Aligned_cols=206 Identities=14% Similarity=0.026 Sum_probs=124.4
Q ss_pred CCCCceEEEEccCCCchhh-----HHH--HHHHHhhCCcEEEEeccCCCCCCCCCc-------CCCcchhhchHHHHHHH
Q 024065 6 GMEEKHFVLVHGVNHGAWC-----WYK--LKARLVAGGHRVTAVDLAASGINMKRI-------EDVHTFHAYSEPLMEVL 71 (273)
Q Consensus 6 g~~~~~vv~lhG~~~~~~~-----~~~--~~~~l~~~g~~vi~~d~~G~G~s~~~~-------~~~~~~~~~~~~l~~~l 71 (273)
|+.-|+++++-|.++---. |-. -...|+..||-|+.+|-||.-...... -....++|.++-+.-+.
T Consensus 639 gkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~La 718 (867)
T KOG2281|consen 639 GKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLA 718 (867)
T ss_pred CCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHH
Confidence 4457889999888753322 211 134677889999999999965443211 12347888998888888
Q ss_pred HhC--CCCCcEEEEEechhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCC
Q 024065 72 ASL--PAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDAS 149 (273)
Q Consensus 72 ~~~--~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (273)
++. -+.+++.+-|||+||.+++....++|+-++..|.-+|...+.... ..+
T Consensus 719 eq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~~YD-----TgY---------------------- 771 (867)
T KOG2281|consen 719 EQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRLYD-----TGY---------------------- 771 (867)
T ss_pred HhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeeeeec-----ccc----------------------
Confidence 776 256789999999999999999999998777666544432111100 000
Q ss_pred CCCcccccccchhhhhhhhcCC-CchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHH
Q 024065 150 NPSHISMLFGREFLTIKIYQLC-PPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWM 228 (273)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~ 228 (273)
.+.++... ..+..-..... ...... +.+. ....|++||--|.-+.......+
T Consensus 772 --------------TERYMg~P~~nE~gY~agSV----~~~Vek------lpde---pnRLlLvHGliDENVHF~Hts~L 824 (867)
T KOG2281|consen 772 --------------TERYMGYPDNNEHGYGAGSV----AGHVEK------LPDE---PNRLLLVHGLIDENVHFAHTSRL 824 (867)
T ss_pred --------------hhhhcCCCccchhcccchhH----HHHHhh------CCCC---CceEEEEecccccchhhhhHHHH
Confidence 00000000 00000000000 000000 1111 34589999999998876655544
Q ss_pred HHh----CCCceEEEEecCCcccccc-ChHhHHHHHHHHHhc
Q 024065 229 IQN----YPVNEVMEIKGGDHMAMLS-DPQKLCDCLSQISLN 265 (273)
Q Consensus 229 ~~~----~~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~ 265 (273)
... -+.-++.++|+--|.+=.. ...-....|..|+++
T Consensus 825 vs~lvkagKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 825 VSALVKAGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred HHHHHhCCCceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 443 3445999999999987553 335677788888875
No 144
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.92 E-value=2.6e-08 Score=73.45 Aligned_cols=105 Identities=18% Similarity=0.274 Sum_probs=70.1
Q ss_pred CCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCC------CCcCCC----------------------cc
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINM------KRIEDV----------------------HT 59 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~------~~~~~~----------------------~~ 59 (273)
.=|.|||-||++++...|..+.-.|+.+||-|.+++.|.+-.+- .+.... ..
T Consensus 117 k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irNeq 196 (399)
T KOG3847|consen 117 KYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRNEQ 196 (399)
T ss_pred CccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeCHH
Confidence 35889999999999999999999999999999999998764331 100000 00
Q ss_pred hhhchHHHH---HHHHhCC-----------------------CCCcEEEEEechhHHHHHHHHHHCCCccceeEEeeccC
Q 024065 60 FHAYSEPLM---EVLASLP-----------------------AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFM 113 (273)
Q Consensus 60 ~~~~~~~l~---~~l~~~~-----------------------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~ 113 (273)
+..-+..+. .+++.+. ...++.++|||+||..++.....+ .+++..|+++..+
T Consensus 197 v~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~-t~FrcaI~lD~WM 275 (399)
T KOG3847|consen 197 VGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSH-TDFRCAIALDAWM 275 (399)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccc-cceeeeeeeeeee
Confidence 111122222 2222220 224689999999999887777654 3678888888653
No 145
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=98.89 E-value=3.8e-08 Score=79.60 Aligned_cols=107 Identities=13% Similarity=0.150 Sum_probs=69.5
Q ss_pred CCCceEEEEccCCCchhhHHHHHH-------------------HHhhCCcEEEEeccC-CCCCCCCCcCC--Ccchhhch
Q 024065 7 MEEKHFVLVHGVNHGAWCWYKLKA-------------------RLVAGGHRVTAVDLA-ASGINMKRIED--VHTFHAYS 64 (273)
Q Consensus 7 ~~~~~vv~lhG~~~~~~~~~~~~~-------------------~l~~~g~~vi~~d~~-G~G~s~~~~~~--~~~~~~~~ 64 (273)
...|.||.+.|.++.+..|..+.+ .+.+. .+++.+|.| |.|.|...... ..+.++.+
T Consensus 38 ~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~-an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a 116 (415)
T PF00450_consen 38 EDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKF-ANLLFIDQPVGTGFSYGNDPSDYVWNDDQAA 116 (415)
T ss_dssp CSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGT-SEEEEE--STTSTT-EESSGGGGS-SHHHHH
T ss_pred CCccEEEEecCCceeccccccccccCceEEeecccccccccccccccc-cceEEEeecCceEEeeccccccccchhhHHH
Confidence 458999999999999988744332 12233 689999955 99999655442 34677778
Q ss_pred HHHHHHHHhC------CCCCcEEEEEechhHHHHHHHHH----HC------CCccceeEEeeccCC
Q 024065 65 EPLMEVLASL------PAEEKVILVGHSLGGVTLALAAD----KF------PHKISVAVFVTAFMP 114 (273)
Q Consensus 65 ~~l~~~l~~~------~~~~~~~lvG~S~Gg~~a~~~a~----~~------p~~v~~lil~~~~~~ 114 (273)
+++.++|+.. -...+++|.|-|+||..+-.+|. .. +-.++++++.++...
T Consensus 117 ~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~d 182 (415)
T PF00450_consen 117 EDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWID 182 (415)
T ss_dssp HHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SB
T ss_pred HHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCcccc
Confidence 8887777665 14469999999999996655543 33 235889998887653
No 146
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.88 E-value=1.1e-07 Score=72.42 Aligned_cols=45 Identities=16% Similarity=0.146 Sum_probs=36.2
Q ss_pred ccceEEEEeecCCCCCCHHHHHHHHHh----C-CCceEEEEecCCccccc
Q 024065 205 GSVKRVYLVCEEDIGLPKQFQHWMIQN----Y-PVNEVMEIKGGDHMAML 249 (273)
Q Consensus 205 ~~~Pvl~i~g~~D~~~~~~~~~~~~~~----~-~~~~~~~~~~~gH~~~~ 249 (273)
.++|+++.+|..|.++|....+.+.+. - .+++++.+++.+|....
T Consensus 218 P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~ 267 (290)
T PF03583_consen 218 PTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAA 267 (290)
T ss_pred CCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhh
Confidence 378999999999999999877766544 3 36788888999997643
No 147
>PLN02606 palmitoyl-protein thioesterase
Probab=98.87 E-value=3.4e-07 Score=68.33 Aligned_cols=103 Identities=17% Similarity=0.109 Sum_probs=69.0
Q ss_pred CCceEEEEccCC--CchhhHHHHHHHHhh-CCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCC-CCCcEEEE
Q 024065 8 EEKHFVLVHGVN--HGAWCWYKLKARLVA-GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP-AEEKVILV 83 (273)
Q Consensus 8 ~~~~vv~lhG~~--~~~~~~~~~~~~l~~-~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~lv 83 (273)
...|||+.||.+ ++...+..+.+.+.+ .|+.+..+. .|-+. ..+-...+.+.++.+.+.+.... -..-++++
T Consensus 25 ~~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~---~~s~~~~~~~Qv~~vce~l~~~~~L~~G~naI 100 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGV---QDSLFMPLRQQASIACEKIKQMKELSEGYNIV 100 (306)
T ss_pred CCCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCc---ccccccCHHHHHHHHHHHHhcchhhcCceEEE
Confidence 367999999999 555567777777752 366555555 23221 11111244555555555544431 11369999
Q ss_pred EechhHHHHHHHHHHCCC--ccceeEEeeccCC
Q 024065 84 GHSLGGVTLALAADKFPH--KISVAVFVTAFMP 114 (273)
Q Consensus 84 G~S~Gg~~a~~~a~~~p~--~v~~lil~~~~~~ 114 (273)
|+|.||.++-.++.++|+ .|+.+|.++++..
T Consensus 101 GfSQGglflRa~ierc~~~p~V~nlISlggph~ 133 (306)
T PLN02606 101 AESQGNLVARGLIEFCDNAPPVINYVSLGGPHA 133 (306)
T ss_pred EEcchhHHHHHHHHHCCCCCCcceEEEecCCcC
Confidence 999999999999999987 5999999997643
No 148
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.86 E-value=6.7e-08 Score=68.83 Aligned_cols=81 Identities=14% Similarity=0.125 Sum_probs=56.1
Q ss_pred CCceEEEEccCCCchhhHHHHHHHHhhCCcE-EEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEec
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHR-VTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHS 86 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~-vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S 86 (273)
++..|||+.|||++...+..+.. ..++. ++++|+|.. +++. | +...+.++|||+|
T Consensus 10 ~~~LilfF~GWg~d~~~f~hL~~---~~~~D~l~~yDYr~l-----------~~d~---~-------~~~y~~i~lvAWS 65 (213)
T PF04301_consen 10 GKELILFFAGWGMDPSPFSHLIL---PENYDVLICYDYRDL-----------DFDF---D-------LSGYREIYLVAWS 65 (213)
T ss_pred CCeEEEEEecCCCChHHhhhccC---CCCccEEEEecCccc-----------cccc---c-------cccCceEEEEEEe
Confidence 36789999999999988876541 22354 466788631 2211 1 1156899999999
Q ss_pred hhHHHHHHHHHHCCCccceeEEeeccCC
Q 024065 87 LGGVTLALAADKFPHKISVAVFVTAFMP 114 (273)
Q Consensus 87 ~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 114 (273)
||-.+|..+....| ++..|.+++...
T Consensus 66 mGVw~A~~~l~~~~--~~~aiAINGT~~ 91 (213)
T PF04301_consen 66 MGVWAANRVLQGIP--FKRAIAINGTPY 91 (213)
T ss_pred HHHHHHHHHhccCC--cceeEEEECCCC
Confidence 99999988876553 677777776543
No 149
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.86 E-value=4.9e-07 Score=64.93 Aligned_cols=104 Identities=20% Similarity=0.194 Sum_probs=73.2
Q ss_pred ceEEEEccCCCchhhHHHHHHHHhhCC-----cEEEEeccCCC----CCCCCCcC----------CCcchhhchHHHHHH
Q 024065 10 KHFVLVHGVNHGAWCWYKLKARLVAGG-----HRVTAVDLAAS----GINMKRIE----------DVHTFHAYSEPLMEV 70 (273)
Q Consensus 10 ~~vv~lhG~~~~~~~~~~~~~~l~~~g-----~~vi~~d~~G~----G~s~~~~~----------~~~~~~~~~~~l~~~ 70 (273)
-|.+|+||++++......++.+|.+.+ --++.+|--|- |.=++... ...+..++...+..+
T Consensus 46 iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~ 125 (288)
T COG4814 46 IPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKA 125 (288)
T ss_pred cceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHH
Confidence 478999999999999999999998763 12455565551 11111110 123555666677666
Q ss_pred HHhC---CCCCcEEEEEechhHHHHHHHHHHCCC-----ccceeEEeeccC
Q 024065 71 LASL---PAEEKVILVGHSLGGVTLALAADKFPH-----KISVAVFVTAFM 113 (273)
Q Consensus 71 l~~~---~~~~~~~lvG~S~Gg~~a~~~a~~~p~-----~v~~lil~~~~~ 113 (273)
+..| -+..++.+|||||||.-...|+..+.. .++.+|.++++.
T Consensus 126 msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpf 176 (288)
T COG4814 126 MSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPF 176 (288)
T ss_pred HHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccc
Confidence 6655 377899999999999988888877643 488899888753
No 150
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.84 E-value=6.7e-08 Score=67.76 Aligned_cols=102 Identities=20% Similarity=0.205 Sum_probs=76.0
Q ss_pred CceEEEEccCCCchhh---HHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCC---CCcEEE
Q 024065 9 EKHFVLVHGVNHGAWC---WYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPA---EEKVIL 82 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~---~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~~~l 82 (273)
+.-|||+-|++..--. -..+...|-+.+|.++-+-++.+ ..--...++++-++|+..+++++.. ...++|
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ss----y~G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL 111 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSS----YNGYGTFSLKDDVEDLKCLLEHIQLCGFSTDVVL 111 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecccc----ccccccccccccHHHHHHHHHHhhccCcccceEE
Confidence 4678999999876543 36788888888999999887632 1111335889999999999998822 238999
Q ss_pred EEechhHHHHHHHH--HHCCCccceeEEeeccCC
Q 024065 83 VGHSLGGVTLALAA--DKFPHKISVAVFVTAFMP 114 (273)
Q Consensus 83 vG~S~Gg~~a~~~a--~~~p~~v~~lil~~~~~~ 114 (273)
+|||.|+.=.+.|. ...|..|...|+.+|...
T Consensus 112 ~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSD 145 (299)
T KOG4840|consen 112 VGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSD 145 (299)
T ss_pred EecCccchHHHHHHHhccchHHHHHHHHhCccch
Confidence 99999999777766 234567888888887754
No 151
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.82 E-value=2e-08 Score=72.27 Aligned_cols=218 Identities=11% Similarity=0.118 Sum_probs=116.6
Q ss_pred HHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhc-------hHHHHHHHHhC-----CCCCcEEEEEechhHHHHHH
Q 024065 27 KLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAY-------SEPLMEVLASL-----PAEEKVILVGHSLGGVTLAL 94 (273)
Q Consensus 27 ~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~-------~~~l~~~l~~~-----~~~~~~~lvG~S~Gg~~a~~ 94 (273)
.+...+.+++...++++-|-+|....+......++.. ++.|.++...+ .+..++.++|-||||.+|..
T Consensus 132 ~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~ 211 (371)
T KOG1551|consen 132 VLSKPINKREIATMVLEKPFYGQRVPEEQIIHMLEYVTDLFKMGRATIQEFVKLFTWSSADGLGNLNLVGRSMGGDIANQ 211 (371)
T ss_pred eecCchhhhcchheeeecccccccCCHHHHHHHHHHHHHHHHhhHHHHHHHHHhcccccccCcccceeeeeecccHHHHh
Confidence 3555666778889999999999876544321122111 11223333222 36789999999999999999
Q ss_pred HHHHCCCccceeEEeeccCCCCCCCcchhHh--hhhhhccCCCccchhhhhhhccCCCCCccccccc-chhhhh--hhhc
Q 024065 95 AADKFPHKISVAVFVTAFMPDTTHRPSFVLE--QYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFG-REFLTI--KIYQ 169 (273)
Q Consensus 95 ~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~ 169 (273)
....++..|.-+=++++.............. ...++.. ....+... ..... ..+... ....
T Consensus 212 vgS~~q~Pva~~p~l~~~~asvs~teg~l~~~~s~~~~~~-~~t~~~~~-------------~~r~p~Q~~~~~~~~~sr 277 (371)
T KOG1551|consen 212 VGSLHQKPVATAPCLNSSKASVSATEGLLLQDTSKMKRFN-QTTNKSGY-------------TSRNPAQSYHLLSKEQSR 277 (371)
T ss_pred hcccCCCCccccccccccccchhhhhhhhhhhhHHHHhhc-cCcchhhh-------------hhhCchhhHHHHHHHhhh
Confidence 9998887776655555432111111000000 0000000 00001000 00000 111100 0111
Q ss_pred CCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCCCceEEEEecCCccc-c
Q 024065 170 LCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDHMA-M 248 (273)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~-~ 248 (273)
....+........+ +++.......-... .--+.++.+++|..+|......+.+..|++++..++ +||.. +
T Consensus 278 n~~~E~~~~Mr~vm-------d~~T~v~~fp~Pvd-psl~ivv~A~~D~Yipr~gv~~lQ~~WPg~eVr~~e-gGHVsay 348 (371)
T KOG1551|consen 278 NSRKESLIFMRGVM-------DECTHVANFPVPVD-PSLIIVVQAKEDAYIPRTGVRSLQEIWPGCEVRYLE-GGHVSAY 348 (371)
T ss_pred cchHHHHHHHHHHH-------HhhchhhcCCCCCC-CCeEEEEEecCCccccccCcHHHHHhCCCCEEEEee-cCceeee
Confidence 11111111111111 11111111100000 112678899999999998899999999999999999 89954 5
Q ss_pred ccChHhHHHHHHHHHhccc
Q 024065 249 LSDPQKLCDCLSQISLNRH 267 (273)
Q Consensus 249 ~~~~~~~~~~i~~fl~~~~ 267 (273)
+-+.+.+.+.|.+-|+++.
T Consensus 349 l~k~dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 349 LFKQDLFRRAIVDGLDRLD 367 (371)
T ss_pred ehhchHHHHHHHHHHHhhh
Confidence 5678999999999999876
No 152
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.80 E-value=1.7e-08 Score=78.41 Aligned_cols=102 Identities=25% Similarity=0.266 Sum_probs=79.9
Q ss_pred CceEEEEccCCCchhhHHHHHHHHhhCCcE---EEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEe
Q 024065 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHR---VTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGH 85 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~---vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~ 85 (273)
.-++|++||++.+...|..+...+...|+. ++.++.++. ..........+.+...+.+++... +.+++.++||
T Consensus 59 ~~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~ql~~~V~~~l~~~-ga~~v~LigH 134 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGG---DGTYSLAVRGEQLFAYVDEVLAKT-GAKKVNLIGH 134 (336)
T ss_pred CceEEEEccCcCCcchhhhhhhhhcchHHHhccccccccccc---CCCccccccHHHHHHHHHHHHhhc-CCCceEEEee
Confidence 459999999988888898888878777776 888888865 111112235556666666667766 7799999999
Q ss_pred chhHHHHHHHHHHCC--CccceeEEeeccCC
Q 024065 86 SLGGVTLALAADKFP--HKISVAVFVTAFMP 114 (273)
Q Consensus 86 S~Gg~~a~~~a~~~p--~~v~~lil~~~~~~ 114 (273)
|+||.....++...+ .+|+.++.++++..
T Consensus 135 S~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 135 SMGGLDSRYYLGVLGGANRVASVVTLGTPHH 165 (336)
T ss_pred cccchhhHHHHhhcCccceEEEEEEeccCCC
Confidence 999999999999888 89999999997643
No 153
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.80 E-value=3.7e-08 Score=72.18 Aligned_cols=99 Identities=22% Similarity=0.260 Sum_probs=59.4
Q ss_pred ceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCC---CCCC-Cc----CC---CcchhhchHHHHHHHHh-C-CC
Q 024065 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASG---INMK-RI----ED---VHTFHAYSEPLMEVLAS-L-PA 76 (273)
Q Consensus 10 ~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G---~s~~-~~----~~---~~~~~~~~~~l~~~l~~-~-~~ 76 (273)
|.|||+||.+..+..-+.. +.. |.-.++++.|-.+ .++. .+ .+ ........+-+.+++.. . -+
T Consensus 192 PLvlfLHgagq~g~dn~~~---l~s-g~gaiawa~pedqcfVlAPQy~~if~d~e~~t~~~l~~~idli~~vlas~ynID 267 (387)
T COG4099 192 PLVLFLHGAGQGGSDNDKV---LSS-GIGAIAWAGPEDQCFVLAPQYNPIFADSEEKTLLYLIEKIDLILEVLASTYNID 267 (387)
T ss_pred cEEEEEecCCCCCchhhhh---hhc-CccceeeecccCceEEEcccccccccccccccchhHHHHHHHHHHHHhhccCcc
Confidence 8899999999777654321 111 2333444433322 0110 00 01 01222233333323322 2 24
Q ss_pred CCcEEEEEechhHHHHHHHHHHCCCccceeEEeecc
Q 024065 77 EEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAF 112 (273)
Q Consensus 77 ~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~ 112 (273)
..+++++|.|+||.-++.++.++|+.+.+.+++++.
T Consensus 268 ~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~ 303 (387)
T COG4099 268 RSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGG 303 (387)
T ss_pred cceEEEEeecCcchhhHHHHHhCchhhheeeeecCC
Confidence 568999999999999999999999999999999874
No 154
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.77 E-value=5.3e-08 Score=71.01 Aligned_cols=87 Identities=21% Similarity=0.216 Sum_probs=50.9
Q ss_pred CceEEEEccCCCchhhHHHHHHHHhhC--CcEEEEeccCCCCCCCCCcCCCcchhhc----hHHHHHHHHhCC-CCCcEE
Q 024065 9 EKHFVLVHGVNHGAWCWYKLKARLVAG--GHRVTAVDLAASGINMKRIEDVHTFHAY----SEPLMEVLASLP-AEEKVI 81 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~~~~~~~l~~~--g~~vi~~d~~G~G~s~~~~~~~~~~~~~----~~~l~~~l~~~~-~~~~~~ 81 (273)
...|||+||+.++...|..+...+... .+.-..+...++...... ....++.. ++.|.+.++... ...++.
T Consensus 4 ~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~--T~~gI~~~g~rL~~eI~~~~~~~~~~~~~Is 81 (217)
T PF05057_consen 4 VHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFK--TFDGIDVCGERLAEEILEHIKDYESKIRKIS 81 (217)
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccccc--cchhhHHHHHHHHHHHHHhccccccccccce
Confidence 568999999999999998887777651 122112222222111111 11234444 444444444441 225899
Q ss_pred EEEechhHHHHHHHHH
Q 024065 82 LVGHSLGGVTLALAAD 97 (273)
Q Consensus 82 lvG~S~Gg~~a~~~a~ 97 (273)
+|||||||.++-.+..
T Consensus 82 fIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 82 FIGHSLGGLIARYALG 97 (217)
T ss_pred EEEecccHHHHHHHHH
Confidence 9999999998865544
No 155
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.77 E-value=6.6e-08 Score=72.65 Aligned_cols=90 Identities=19% Similarity=0.162 Sum_probs=66.4
Q ss_pred CCCceEEEEccCCCchhhH-------HHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhC-----
Q 024065 7 MEEKHFVLVHGVNHGAWCW-------YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL----- 74 (273)
Q Consensus 7 ~~~~~vv~lhG~~~~~~~~-------~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~----- 74 (273)
.....||++-|.++.-+.. ..+.+...+.|-+|+++++||.|.|.... +.++++.|-.+.++.+
T Consensus 135 ~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~----s~~dLv~~~~a~v~yL~d~~~ 210 (365)
T PF05677_consen 135 KPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP----SRKDLVKDYQACVRYLRDEEQ 210 (365)
T ss_pred CCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC----CHHHHHHHHHHHHHHHHhccc
Confidence 4577899999987666551 12233333346899999999999998765 4588888877777666
Q ss_pred -CCCCcEEEEEechhHHHHHHHHHHCC
Q 024065 75 -PAEEKVILVGHSLGGVTLALAADKFP 100 (273)
Q Consensus 75 -~~~~~~~lvG~S~Gg~~a~~~a~~~p 100 (273)
.+.+++++.|||+||.++..++.++.
T Consensus 211 G~ka~~Ii~yG~SLGG~Vqa~AL~~~~ 237 (365)
T PF05677_consen 211 GPKAKNIILYGHSLGGGVQAEALKKEV 237 (365)
T ss_pred CCChheEEEeeccccHHHHHHHHHhcc
Confidence 13368999999999999988776654
No 156
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.77 E-value=2.2e-07 Score=74.56 Aligned_cols=175 Identities=14% Similarity=0.105 Sum_probs=106.9
Q ss_pred CceEEEEccCC----CchhhHHHHHHHHhhCC--cEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhC-------C
Q 024065 9 EKHFVLVHGVN----HGAWCWYKLKARLVAGG--HRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL-------P 75 (273)
Q Consensus 9 ~~~vv~lhG~~----~~~~~~~~~~~~l~~~g--~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~-------~ 75 (273)
.|.++++||.+ .+.++| .+...|+..| ..|-++|++.- . ...++...++.+..+.+.. .
T Consensus 176 spl~i~aps~p~ap~tSd~~~-~wqs~lsl~gevvev~tfdl~n~------i-gG~nI~h~ae~~vSf~r~kvlei~gef 247 (784)
T KOG3253|consen 176 SPLAIKAPSTPLAPKTSDRMW-SWQSRLSLKGEVVEVPTFDLNNP------I-GGANIKHAAEYSVSFDRYKVLEITGEF 247 (784)
T ss_pred CceEEeccCCCCCCccchHHH-hHHHHHhhhceeeeeccccccCC------C-CCcchHHHHHHHHHHhhhhhhhhhccC
Confidence 67889999987 222222 2233333322 45677777631 1 1134555555555554421 2
Q ss_pred CCCcEEEEEechhHHHHHHHHHHCC-CccceeEEeeccCCCCCCCcchhHhhhhhhccCCCccchhhhhhhccCCCCCcc
Q 024065 76 AEEKVILVGHSLGGVTLALAADKFP-HKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHI 154 (273)
Q Consensus 76 ~~~~~~lvG~S~Gg~~a~~~a~~~p-~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (273)
...+++|+|.|||+.++.+...... ..|+++|.++-+.......
T Consensus 248 pha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgp----------------------------------- 292 (784)
T KOG3253|consen 248 PHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGP----------------------------------- 292 (784)
T ss_pred CCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCcc-----------------------------------
Confidence 5679999999999888877765433 3488888777432111100
Q ss_pred cccccchhhhhhhhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCC-
Q 024065 155 SMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYP- 233 (273)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~- 233 (273)
....++ .+-.++.|+|++.|.+|..+++...+++++++.
T Consensus 293 -rgirDE---------------------------------------~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA 332 (784)
T KOG3253|consen 293 -RGIRDE---------------------------------------ALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQA 332 (784)
T ss_pred -cCCcch---------------------------------------hhHhcCCceEEEecCCcccCCHHHHHHHHHHhhc
Confidence 000000 001128899999999999999999999988864
Q ss_pred CceEEEEecCCccccccC---------hHhHHHHHHHHHhcc
Q 024065 234 VNEVMEIKGGDHMAMLSD---------PQKLCDCLSQISLNR 266 (273)
Q Consensus 234 ~~~~~~~~~~gH~~~~~~---------~~~~~~~i~~fl~~~ 266 (273)
..+++++.+++|.+-.-. ..++...+.++|.+.
T Consensus 333 ~~elhVI~~adhsmaipk~k~esegltqseVd~~i~~aI~ef 374 (784)
T KOG3253|consen 333 EVELHVIGGADHSMAIPKRKVESEGLTQSEVDSAIAQAIKEF 374 (784)
T ss_pred cceEEEecCCCccccCCccccccccccHHHHHHHHHHHHHHH
Confidence 568999999999876533 245555666555544
No 157
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.72 E-value=2.8e-07 Score=67.87 Aligned_cols=105 Identities=16% Similarity=0.159 Sum_probs=73.5
Q ss_pred CCceEEEEccCCCchhhHHHHH--HHHhh-CCcEEEEeccC-------CCCCCCCCcC---CCcchhhchHHHHHHHHhC
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLK--ARLVA-GGHRVTAVDLA-------ASGINMKRIE---DVHTFHAYSEPLMEVLASL 74 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~--~~l~~-~g~~vi~~d~~-------G~G~s~~~~~---~~~~~~~~~~~l~~~l~~~ 74 (273)
+.|.||++||..++....+... +.|++ .||-|+.+|-- +.+.+..+.+ ...++..+.+.+..++.+.
T Consensus 60 ~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~ddVgflr~lva~l~~~~ 139 (312)
T COG3509 60 GAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRRRGVDDVGFLRALVAKLVNEY 139 (312)
T ss_pred CCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCcccccCCccHHHHHHHHHHHHHHhc
Confidence 4578999999999988765544 44444 58999988522 2233322221 2224444455555555555
Q ss_pred CCCC--cEEEEEechhHHHHHHHHHHCCCccceeEEeeccC
Q 024065 75 PAEE--KVILVGHSLGGVTLALAADKFPHKISVAVFVTAFM 113 (273)
Q Consensus 75 ~~~~--~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~ 113 (273)
+.+ +|++.|.|-||.++..++..+|+.+.++..+++..
T Consensus 140 -gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 140 -GIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred -CcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 444 89999999999999999999999999999888775
No 158
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.71 E-value=4.7e-06 Score=64.07 Aligned_cols=110 Identities=13% Similarity=0.126 Sum_probs=72.4
Q ss_pred cCCCCceEEEEccCCCchh---hHHHHHHHHhhCCcEEEEeccCC--CCCCCC----------Cc----C-CC-------
Q 024065 5 VGMEEKHFVLVHGVNHGAW---CWYKLKARLVAGGHRVTAVDLAA--SGINMK----------RI----E-DV------- 57 (273)
Q Consensus 5 ~g~~~~~vv~lhG~~~~~~---~~~~~~~~l~~~g~~vi~~d~~G--~G~s~~----------~~----~-~~------- 57 (273)
++.....||++||.+.+.. .-..+-..|.+.|+..+++.+|. ...+.. .. . ..
T Consensus 83 ~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 162 (310)
T PF12048_consen 83 SAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPAS 162 (310)
T ss_pred CCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCcccc
Confidence 3445668999999998764 34677888999999999998887 111100 00 0 00
Q ss_pred ----cch----hhchHHHHHHHHhC--CCCCcEEEEEechhHHHHHHHHHHCCC-ccceeEEeeccCC
Q 024065 58 ----HTF----HAYSEPLMEVLASL--PAEEKVILVGHSLGGVTLALAADKFPH-KISVAVFVTAFMP 114 (273)
Q Consensus 58 ----~~~----~~~~~~l~~~l~~~--~~~~~~~lvG~S~Gg~~a~~~a~~~p~-~v~~lil~~~~~~ 114 (273)
... ..+..-|.+++..+ .+..+++|+||+.|+..++.+....+. .++++|++++..+
T Consensus 163 ~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p 230 (310)
T PF12048_consen 163 AQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWP 230 (310)
T ss_pred ccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCC
Confidence 001 11222222222222 266679999999999999999988774 5999999998643
No 159
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.71 E-value=8.3e-07 Score=66.13 Aligned_cols=58 Identities=16% Similarity=0.193 Sum_probs=48.2
Q ss_pred cceEEEEeecCCCCCCHHHHHHHHHhCC----CceEEEEecCCccccc-cChHhHHHHHHHHH
Q 024065 206 SVKRVYLVCEEDIGLPKQFQHWMIQNYP----VNEVMEIKGGDHMAML-SDPQKLCDCLSQIS 263 (273)
Q Consensus 206 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl 263 (273)
.+|-|+++++.|.+++.+..++..+... .++...++++.|..|+ ++|++..+.+.+|+
T Consensus 178 ~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 178 RCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 6899999999999999987776654432 3677888999999887 58899999999885
No 160
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.67 E-value=9.1e-08 Score=71.64 Aligned_cols=105 Identities=20% Similarity=0.198 Sum_probs=70.5
Q ss_pred cCCCCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhC-CCCCcEEEE
Q 024065 5 VGMEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL-PAEEKVILV 83 (273)
Q Consensus 5 ~g~~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~lv 83 (273)
.|++...|+|+-|..+--+. ..+..=.+.||.|+.+++||++.|...+-...+....-.-+.-.++.+ ...+.+++.
T Consensus 239 ~~ngq~LvIC~EGNAGFYEv--G~m~tP~~lgYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~Lgf~~edIily 316 (517)
T KOG1553|consen 239 SGNGQDLVICFEGNAGFYEV--GVMNTPAQLGYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVLGFRQEDIILY 316 (517)
T ss_pred CCCCceEEEEecCCccceEe--eeecChHHhCceeeccCCCCccccCCCCCcccchHHHHHHHHHHHHHcCCCccceEEE
Confidence 35556678888776543222 111111245899999999999999876644333333222223334555 245789999
Q ss_pred EechhHHHHHHHHHHCCCccceeEEeecc
Q 024065 84 GHSLGGVTLALAADKFPHKISVAVFVTAF 112 (273)
Q Consensus 84 G~S~Gg~~a~~~a~~~p~~v~~lil~~~~ 112 (273)
|||.||.-+..+|..||+ |+++|+-+++
T Consensus 317 gWSIGGF~~~waAs~YPd-VkavvLDAtF 344 (517)
T KOG1553|consen 317 GWSIGGFPVAWAASNYPD-VKAVVLDATF 344 (517)
T ss_pred EeecCCchHHHHhhcCCC-ceEEEeecch
Confidence 999999999999999994 9999987754
No 161
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.64 E-value=2.7e-06 Score=68.04 Aligned_cols=106 Identities=13% Similarity=0.206 Sum_probs=64.6
Q ss_pred CCceEEEEccCCCchh-hHHHHHHHHhhCCc----EEEEeccCCC-CCCCCCcCCCcchhhchHHHHHHHHhC----CCC
Q 024065 8 EEKHFVLVHGVNHGAW-CWYKLKARLVAGGH----RVTAVDLAAS-GINMKRIEDVHTFHAYSEPLMEVLASL----PAE 77 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~-~~~~~~~~l~~~g~----~vi~~d~~G~-G~s~~~~~~~~~~~~~~~~l~~~l~~~----~~~ 77 (273)
..|.|+++||-.-... .....++.|.+.|. -++.+|..+. .++..-.....-.+.+++++.-.+++. .+.
T Consensus 208 ~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l~~eLlP~I~~~y~~~~d~ 287 (411)
T PRK10439 208 ERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAVQQELLPQVRAIAPFSDDA 287 (411)
T ss_pred CCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHHHHHHHHHHHHhCCCCCCc
Confidence 4688899999531111 12234455555553 3567765321 111111111112333456666666553 244
Q ss_pred CcEEEEEechhHHHHHHHHHHCCCccceeEEeeccC
Q 024065 78 EKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFM 113 (273)
Q Consensus 78 ~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~ 113 (273)
++.+|+|+||||..|+.++.++|+++.+++.+++..
T Consensus 288 ~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred cceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 678999999999999999999999999999999753
No 162
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.62 E-value=4.4e-06 Score=62.60 Aligned_cols=101 Identities=12% Similarity=0.093 Sum_probs=66.9
Q ss_pred CceEEEEccCCCchhh--HHHHHHHHhh-CCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCC-CCCcEEEEE
Q 024065 9 EKHFVLVHGVNHGAWC--WYKLKARLVA-GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP-AEEKVILVG 84 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~--~~~~~~~l~~-~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~lvG 84 (273)
..|+|+.||.|.+... ...+.+.+.+ .|..+.++.. |.+ ...+-...+.+.++.+.+.+.... -..-++++|
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~-~~~s~~~~~~~Qve~vce~l~~~~~l~~G~naIG 100 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNG-VGDSWLMPLTQQAEIACEKVKQMKELSQGYNIVG 100 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCC-ccccceeCHHHHHHHHHHHHhhchhhhCcEEEEE
Confidence 5789999999876653 3444444433 2566666654 333 112222355556655555554431 113599999
Q ss_pred echhHHHHHHHHHHCCC--ccceeEEeeccC
Q 024065 85 HSLGGVTLALAADKFPH--KISVAVFVTAFM 113 (273)
Q Consensus 85 ~S~Gg~~a~~~a~~~p~--~v~~lil~~~~~ 113 (273)
+|.||.++-.++.++|+ .|+.+|.++++.
T Consensus 101 fSQGGlflRa~ierc~~~p~V~nlISlggph 131 (314)
T PLN02633 101 RSQGNLVARGLIEFCDGGPPVYNYISLAGPH 131 (314)
T ss_pred EccchHHHHHHHHHCCCCCCcceEEEecCCC
Confidence 99999999999999987 599999999764
No 163
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.62 E-value=4.5e-07 Score=68.74 Aligned_cols=105 Identities=20% Similarity=0.222 Sum_probs=66.1
Q ss_pred CCceEEEEccCCCchhh-HHHHHHHHhhCC--cEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhC---CCCCcEE
Q 024065 8 EEKHFVLVHGVNHGAWC-WYKLKARLVAGG--HRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL---PAEEKVI 81 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~-~~~~~~~l~~~g--~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~ 81 (273)
++..+||+||+..+-.. -.+.++-..+.| ...+.+-||..|.--.-..+..+.+.-..+++.+|..+ ...++++
T Consensus 115 ~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I~ 194 (377)
T COG4782 115 AKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRIY 194 (377)
T ss_pred CCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceEE
Confidence 47789999999865544 234444444443 45788889876653211111123333344455555444 2678999
Q ss_pred EEEechhHHHHHHHHHH--------CCCccceeEEeecc
Q 024065 82 LVGHSLGGVTLALAADK--------FPHKISVAVFVTAF 112 (273)
Q Consensus 82 lvG~S~Gg~~a~~~a~~--------~p~~v~~lil~~~~ 112 (273)
|++||||..++++...+ .+.+++-+|+-+|-
T Consensus 195 ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPD 233 (377)
T COG4782 195 LLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPD 233 (377)
T ss_pred EEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCC
Confidence 99999999999887654 23457778877764
No 164
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.60 E-value=3e-07 Score=58.36 Aligned_cols=62 Identities=13% Similarity=0.108 Sum_probs=56.0
Q ss_pred cceEEEEeecCCCCCCHHHHHHHHHhCCCceEEEEecCCccccccChHhHHHHHHHHHhccc
Q 024065 206 SVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDHMAMLSDPQKLCDCLSQISLNRH 267 (273)
Q Consensus 206 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 267 (273)
..|+|++.++.|++.|.+.++.+.+.+++++++.+++.||..+...-.-+.+.+.+||..-.
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~G~ 95 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLDGT 95 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCcceecCCChHHHHHHHHHHHcCC
Confidence 58999999999999999999999999999999999999999987555778899999998543
No 165
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.58 E-value=7e-07 Score=72.53 Aligned_cols=106 Identities=20% Similarity=0.148 Sum_probs=68.6
Q ss_pred CceEEEEccCCCchhhH--HHHHHHHhhC-CcEEEEeccCCCCCCCCCcC------CCcchhhchHHHHHHHHhC-----
Q 024065 9 EKHFVLVHGVNHGAWCW--YKLKARLVAG-GHRVTAVDLAASGINMKRIE------DVHTFHAYSEPLMEVLASL----- 74 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~--~~~~~~l~~~-g~~vi~~d~~G~G~s~~~~~------~~~~~~~~~~~l~~~l~~~----- 74 (273)
+|.+|++.|=+.-...| ..+...|+++ |--++++++|-+|.|.+-.+ ...|.++..+|+..+++++
T Consensus 29 gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~ 108 (434)
T PF05577_consen 29 GPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYN 108 (434)
T ss_dssp SEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhc
Confidence 66666665544332222 2344455543 67899999999999975332 2357888888988888776
Q ss_pred -CCCCcEEEEEechhHHHHHHHHHHCCCccceeEEeeccCC
Q 024065 75 -PAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMP 114 (273)
Q Consensus 75 -~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 114 (273)
....|++++|-|+||++|..+-.+||+.|.+.+.-++++.
T Consensus 109 ~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 109 TAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp TGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred CCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 1345899999999999999999999999999998887654
No 166
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.53 E-value=2.9e-07 Score=69.15 Aligned_cols=107 Identities=14% Similarity=0.146 Sum_probs=64.0
Q ss_pred CCCceEEEEccCCCchhhH--HHHHHHHhhCC----cEEEEeccCCCCCC--CCC--------cC---CCcch-hhchHH
Q 024065 7 MEEKHFVLVHGVNHGAWCW--YKLKARLVAGG----HRVTAVDLAASGIN--MKR--------IE---DVHTF-HAYSEP 66 (273)
Q Consensus 7 ~~~~~vv~lhG~~~~~~~~--~~~~~~l~~~g----~~vi~~d~~G~G~s--~~~--------~~---~~~~~-~~~~~~ 66 (273)
..-|+|+++||.......+ ......+.+.| .-+++++..+.+.. +.. .. ....+ ..+.++
T Consensus 22 ~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~e 101 (251)
T PF00756_consen 22 KPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGGDAYETFLTEE 101 (251)
T ss_dssp TTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTHHHHHHHHHTH
T ss_pred CCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCCcccceehhcc
Confidence 3468899999973222222 23333333332 34566666554411 100 00 00112 234456
Q ss_pred HHHHHHhCCCC--CcEEEEEechhHHHHHHHHHHCCCccceeEEeeccC
Q 024065 67 LMEVLASLPAE--EKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFM 113 (273)
Q Consensus 67 l~~~l~~~~~~--~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~ 113 (273)
|...|+..... ++..|+|+||||..|+.++.++|+.+.+++.++|..
T Consensus 102 l~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~ 150 (251)
T PF00756_consen 102 LIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGAL 150 (251)
T ss_dssp HHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEES
T ss_pred chhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccc
Confidence 66666554121 127999999999999999999999999999999763
No 167
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.52 E-value=1.1e-05 Score=62.62 Aligned_cols=106 Identities=11% Similarity=0.094 Sum_probs=68.8
Q ss_pred CCCceEEEEccCCCchhhHH-------HHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCc
Q 024065 7 MEEKHFVLVHGVNHGAWCWY-------KLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEK 79 (273)
Q Consensus 7 ~~~~~vv~lhG~~~~~~~~~-------~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 79 (273)
++.|.||++||.|-.-.... .+...|. . ..++++|+.-...-.........+.+.++-...+++.. +.++
T Consensus 120 k~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~-~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~-G~~n 196 (374)
T PF10340_consen 120 KSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-E-VSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESE-GNKN 196 (374)
T ss_pred CCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-C-CeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhcc-CCCe
Confidence 34799999999874443322 2223333 3 58899998643200111112235666677777777677 7899
Q ss_pred EEEEEechhHHHHHHHHHHCC--C---ccceeEEeeccCCC
Q 024065 80 VILVGHSLGGVTLALAADKFP--H---KISVAVFVTAFMPD 115 (273)
Q Consensus 80 ~~lvG~S~Gg~~a~~~a~~~p--~---~v~~lil~~~~~~~ 115 (273)
++|+|-|.||.+++.+..... + .-+++|+++|....
T Consensus 197 I~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l 237 (374)
T PF10340_consen 197 IILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNL 237 (374)
T ss_pred EEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCC
Confidence 999999999999988765321 1 24789999987643
No 168
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.50 E-value=6.4e-06 Score=66.99 Aligned_cols=107 Identities=15% Similarity=0.018 Sum_probs=74.1
Q ss_pred CCceEEEEc--cCCCchh-hH--HHHHH---HHhhCCcEEEEeccCCCCCCCCCcCCCcc-hhhchHHHHHHHHhC-CCC
Q 024065 8 EEKHFVLVH--GVNHGAW-CW--YKLKA---RLVAGGHRVTAVDLAASGINMKRIEDVHT-FHAYSEPLMEVLASL-PAE 77 (273)
Q Consensus 8 ~~~~vv~lh--G~~~~~~-~~--~~~~~---~l~~~g~~vi~~d~~G~G~s~~~~~~~~~-~~~~~~~l~~~l~~~-~~~ 77 (273)
..|+++..+ .+.-... .+ ....+ .++.+||.|+..|.||.|.|+.......+ -.+-.-|+.+++.+. -.+
T Consensus 44 ~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~~~~~E~~Dg~D~I~Wia~QpWsN 123 (563)
T COG2936 44 PLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDPESSREAEDGYDTIEWLAKQPWSN 123 (563)
T ss_pred CCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcccceeccccccchhHHHHHHHhCCccC
Confidence 377888888 3332210 11 12233 57788999999999999999987654334 122233444554444 356
Q ss_pred CcEEEEEechhHHHHHHHHHHCCCccceeEEeeccCC
Q 024065 78 EKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMP 114 (273)
Q Consensus 78 ~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 114 (273)
.+|..+|.|++|...+.+|+..|.-++.++...+...
T Consensus 124 G~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 124 GNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred CeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 7999999999999999999998888888887776543
No 169
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.49 E-value=1.8e-06 Score=66.39 Aligned_cols=60 Identities=15% Similarity=0.222 Sum_probs=49.6
Q ss_pred ceEEEEeecCCCCCCHHHHHHHHHhCCC--ceEEEEecCCccccccChH---hHHHHHHHHHhcc
Q 024065 207 VKRVYLVCEEDIGLPKQFQHWMIQNYPV--NEVMEIKGGDHMAMLSDPQ---KLCDCLSQISLNR 266 (273)
Q Consensus 207 ~Pvl~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~---~~~~~i~~fl~~~ 266 (273)
+|+|+++|.+|..+|......+.+.... .+...+++++|......+. +..+.+.+|+.+.
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 7999999999999999998888877655 5788889999998875443 6778888888764
No 170
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.41 E-value=1.3e-06 Score=69.57 Aligned_cols=82 Identities=20% Similarity=0.232 Sum_probs=59.6
Q ss_pred hHHHHHHHHhhCCcEE------EEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhC--CCCCcEEEEEechhHHHHHHH
Q 024065 24 CWYKLKARLVAGGHRV------TAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL--PAEEKVILVGHSLGGVTLALA 95 (273)
Q Consensus 24 ~~~~~~~~l~~~g~~v------i~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~lvG~S~Gg~~a~~~ 95 (273)
.|..+++.|.+.||.. .-+|+|- | + ...+++...+...++.. ...++++||||||||.++..+
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~---~---~---~~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~f 136 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRL---S---P---AERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYF 136 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhh---c---h---hhHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHH
Confidence 6899999999877742 2368872 1 1 12345556666666554 236899999999999999999
Q ss_pred HHHCCC------ccceeEEeeccCC
Q 024065 96 ADKFPH------KISVAVFVTAFMP 114 (273)
Q Consensus 96 a~~~p~------~v~~lil~~~~~~ 114 (273)
....+. .|+++|.++++..
T Consensus 137 l~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 137 LQWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred HHhccchhhHHhhhhEEEEeCCCCC
Confidence 888753 4999999997644
No 171
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.37 E-value=3.8e-06 Score=69.84 Aligned_cols=103 Identities=15% Similarity=0.135 Sum_probs=64.9
Q ss_pred CCceEEEEccCCCchhhHHHHHHHHhh----------------CCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHH
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLKARLVA----------------GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVL 71 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~~~l~~----------------~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l 71 (273)
++-||+|++|..++..+-+.++..... ..|+.+++|+-+ +-..-+..++.+.++-+.+.+
T Consensus 88 sGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnE----e~tAm~G~~l~dQtEYV~dAI 163 (973)
T KOG3724|consen 88 SGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNE----EFTAMHGHILLDQTEYVNDAI 163 (973)
T ss_pred CCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccc----hhhhhccHhHHHHHHHHHHHH
Confidence 577999999999998887777665441 125566666532 000111235666666665555
Q ss_pred HhC----CC--------CCcEEEEEechhHHHHHHHHHH---CCCccceeEEeeccCC
Q 024065 72 ASL----PA--------EEKVILVGHSLGGVTLALAADK---FPHKISVAVFVTAFMP 114 (273)
Q Consensus 72 ~~~----~~--------~~~~~lvG~S~Gg~~a~~~a~~---~p~~v~~lil~~~~~~ 114 (273)
+.+ .+ ...+++|||||||.+|...+-. .++.|..++..+++..
T Consensus 164 k~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~ 221 (973)
T KOG3724|consen 164 KYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHA 221 (973)
T ss_pred HHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCccc
Confidence 543 11 3459999999999999877632 2345777777776543
No 172
>PLN02209 serine carboxypeptidase
Probab=98.35 E-value=2.6e-05 Score=62.78 Aligned_cols=59 Identities=19% Similarity=0.228 Sum_probs=48.4
Q ss_pred cceEEEEeecCCCCCCHHHHHHHHHhC------------------------CC-ceEEEEecCCccccccChHhHHHHHH
Q 024065 206 SVKRVYLVCEEDIGLPKQFQHWMIQNY------------------------PV-NEVMEIKGGDHMAMLSDPQKLCDCLS 260 (273)
Q Consensus 206 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~------------------------~~-~~~~~~~~~gH~~~~~~~~~~~~~i~ 260 (273)
.++||+..|+.|.+|+.-..+.+.+.+ .+ .+++.+.+|||+.. .+|++..+.+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 579999999999999987776665543 22 56777889999996 59999999999
Q ss_pred HHHhc
Q 024065 261 QISLN 265 (273)
Q Consensus 261 ~fl~~ 265 (273)
+|+..
T Consensus 430 ~fi~~ 434 (437)
T PLN02209 430 RWISG 434 (437)
T ss_pred HHHcC
Confidence 99964
No 173
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=98.33 E-value=2.3e-05 Score=63.12 Aligned_cols=60 Identities=17% Similarity=0.179 Sum_probs=48.7
Q ss_pred cceEEEEeecCCCCCCHHHHHHHHHhCC------------------------C-ceEEEEecCCccccccChHhHHHHHH
Q 024065 206 SVKRVYLVCEEDIGLPKQFQHWMIQNYP------------------------V-NEVMEIKGGDHMAMLSDPQKLCDCLS 260 (273)
Q Consensus 206 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~------------------------~-~~~~~~~~~gH~~~~~~~~~~~~~i~ 260 (273)
.++||+..|+.|.+||.-..+.+.+.+. + .+++.+.+|||+.. .+|+...+.+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 5799999999999999887776655431 2 46777889999996 58999999999
Q ss_pred HHHhcc
Q 024065 261 QISLNR 266 (273)
Q Consensus 261 ~fl~~~ 266 (273)
+|+...
T Consensus 426 ~Fi~~~ 431 (433)
T PLN03016 426 RWISGQ 431 (433)
T ss_pred HHHcCC
Confidence 999753
No 174
>COG3150 Predicted esterase [General function prediction only]
Probab=98.29 E-value=6.9e-06 Score=55.25 Aligned_cols=88 Identities=17% Similarity=0.192 Sum_probs=62.2
Q ss_pred EEEEccCCCchhhHHHH--HHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEechhH
Q 024065 12 FVLVHGVNHGAWCWYKL--KARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGG 89 (273)
Q Consensus 12 vv~lhG~~~~~~~~~~~--~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg 89 (273)
||++|||.++....... .+.+... .+-+.+ |...+. .++...++.+..++... +.+...|||.|+||
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~-~~~i~y-------~~p~l~--h~p~~a~~ele~~i~~~-~~~~p~ivGssLGG 70 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDED-VRDIEY-------STPHLP--HDPQQALKELEKAVQEL-GDESPLIVGSSLGG 70 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhcc-ccceee-------ecCCCC--CCHHHHHHHHHHHHHHc-CCCCceEEeecchH
Confidence 89999999988887542 2333333 222222 222221 47888899999999999 77779999999999
Q ss_pred HHHHHHHHHCCCccceeEEeeccC
Q 024065 90 VTLALAADKFPHKISVAVFVTAFM 113 (273)
Q Consensus 90 ~~a~~~a~~~p~~v~~lil~~~~~ 113 (273)
..|..++.++. ++++ +++|..
T Consensus 71 Y~At~l~~~~G--irav-~~NPav 91 (191)
T COG3150 71 YYATWLGFLCG--IRAV-VFNPAV 91 (191)
T ss_pred HHHHHHHHHhC--Chhh-hcCCCc
Confidence 99999998875 4444 466653
No 175
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=98.23 E-value=2.3e-06 Score=63.46 Aligned_cols=106 Identities=15% Similarity=0.144 Sum_probs=57.4
Q ss_pred CCceEEEEccCCCch---hhHHHHHHHHhhC--CcEEEEeccCCCCCC-CCCcCCCcchhhchHHHHHHHHhCC-CCCcE
Q 024065 8 EEKHFVLVHGVNHGA---WCWYKLKARLVAG--GHRVTAVDLAASGIN-MKRIEDVHTFHAYSEPLMEVLASLP-AEEKV 80 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~---~~~~~~~~~l~~~--g~~vi~~d~~G~G~s-~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~ 80 (273)
...|||+.||+|.+. ..+..+...+.+. |--|.+++.- -+.+ +....-...+.+.++.+.+.+...+ -..-+
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig-~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~G~ 82 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIG-NDPSEDVENSFFGNVNDQVEQVCEQLANDPELANGF 82 (279)
T ss_dssp SS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SS-SSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGTT-E
T ss_pred CCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEEC-CCcchhhhhhHHHHHHHHHHHHHHHHhhChhhhcce
Confidence 356899999999753 3455544443332 6677888762 2211 1111111245666666666665541 11579
Q ss_pred EEEEechhHHHHHHHHHHCCC-ccceeEEeeccCC
Q 024065 81 ILVGHSLGGVTLALAADKFPH-KISVAVFVTAFMP 114 (273)
Q Consensus 81 ~lvG~S~Gg~~a~~~a~~~p~-~v~~lil~~~~~~ 114 (273)
+++|+|.||.++-.++.++|+ .|..+|.++++..
T Consensus 83 ~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~ 117 (279)
T PF02089_consen 83 NAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHM 117 (279)
T ss_dssp EEEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT
T ss_pred eeeeeccccHHHHHHHHHCCCCCceeEEEecCccc
Confidence 999999999999999999975 6999999997643
No 176
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=98.11 E-value=3.7e-05 Score=56.01 Aligned_cols=101 Identities=15% Similarity=0.189 Sum_probs=69.4
Q ss_pred ceEEEEccCCCchhh--HHHHHHHHhhC-CcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCC-CCCcEEEEEe
Q 024065 10 KHFVLVHGVNHGAWC--WYKLKARLVAG-GHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLP-AEEKVILVGH 85 (273)
Q Consensus 10 ~~vv~lhG~~~~~~~--~~~~~~~l~~~-g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~lvG~ 85 (273)
.|+|++||.+.+... ...+.+.+.+. |..|+++|. |-| -. ........++++...+.+.... -..-++++|.
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g--~~-~s~l~pl~~Qv~~~ce~v~~m~~lsqGynivg~ 99 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDG--IK-DSSLMPLWEQVDVACEKVKQMPELSQGYNIVGY 99 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCC--cc-hhhhccHHHHHHHHHHHHhcchhccCceEEEEE
Confidence 689999999988776 66777766653 778999986 444 10 1111234455554444444321 1256999999
Q ss_pred chhHHHHHHHHHHCCC-ccceeEEeeccCC
Q 024065 86 SLGGVTLALAADKFPH-KISVAVFVTAFMP 114 (273)
Q Consensus 86 S~Gg~~a~~~a~~~p~-~v~~lil~~~~~~ 114 (273)
|.||.++-.++...++ .|..+|.++++..
T Consensus 100 SQGglv~Raliq~cd~ppV~n~ISL~gPha 129 (296)
T KOG2541|consen 100 SQGGLVARALIQFCDNPPVKNFISLGGPHA 129 (296)
T ss_pred ccccHHHHHHHHhCCCCCcceeEeccCCcC
Confidence 9999999999988775 6889998887643
No 177
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=98.10 E-value=0.00051 Score=50.95 Aligned_cols=104 Identities=12% Similarity=0.087 Sum_probs=72.6
Q ss_pred CceEEEEccCCCchhh-HHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEech
Q 024065 9 EKHFVLVHGVNHGAWC-WYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSL 87 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~-~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~ 87 (273)
.|.|+++-...++... .+...+.|... ..|+.-||-.--.-+-.. ..++++++.+-+.+.++.+ +.+ +++++.+.
T Consensus 103 dPkvLivapmsGH~aTLLR~TV~alLp~-~~vyitDW~dAr~Vp~~~-G~FdldDYIdyvie~~~~~-Gp~-~hv~aVCQ 178 (415)
T COG4553 103 DPKVLIVAPMSGHYATLLRGTVEALLPY-HDVYITDWVDARMVPLEA-GHFDLDDYIDYVIEMINFL-GPD-AHVMAVCQ 178 (415)
T ss_pred CCeEEEEecccccHHHHHHHHHHHhccc-cceeEeeccccceeeccc-CCccHHHHHHHHHHHHHHh-CCC-CcEEEEec
Confidence 4567777776555544 57778888775 789999986433222222 3479999999999999999 543 77777776
Q ss_pred hHH-----HHHHHHHHCCCccceeEEeeccCCCC
Q 024065 88 GGV-----TLALAADKFPHKISVAVFVTAFMPDT 116 (273)
Q Consensus 88 Gg~-----~a~~~a~~~p~~v~~lil~~~~~~~~ 116 (273)
=+. +++..+...|..-.+++++++++...
T Consensus 179 P~vPvLAAisLM~~~~~p~~PssMtlmGgPIDaR 212 (415)
T COG4553 179 PTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDAR 212 (415)
T ss_pred CCchHHHHHHHHHhcCCCCCCceeeeecCccccc
Confidence 543 44555556777788999999876533
No 178
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.10 E-value=4.6e-05 Score=59.42 Aligned_cols=150 Identities=13% Similarity=0.117 Sum_probs=89.8
Q ss_pred CCCcEEEEEechhHHHHHHHHHHCCCccceeEEeeccCCCCCCCcchhHhhhhhhccCCCc-cchhhhhhhccCCCCCcc
Q 024065 76 AEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDD-SWLDTQFSQCDASNPSHI 154 (273)
Q Consensus 76 ~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 154 (273)
..+++++.|.|==|..+...|. -..||++++-+.-...... ..+....+.. . .|-....
T Consensus 170 ~i~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vid~LN~~----~~l~h~y~~y----G~~ws~a~~----------- 229 (367)
T PF10142_consen 170 NIEKFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVIDVLNMK----ANLEHQYRSY----GGNWSFAFQ----------- 229 (367)
T ss_pred CccEEEEeCCchHhHHHHHhhc-cCcceeEEeeEEEccCCcH----HHHHHHHHHh----CCCCccchh-----------
Confidence 5789999999999999999887 5568888886554322111 1122222211 1 1111111
Q ss_pred cccccchhhhhhhhcCCCchhHHHhhhhccCCccccccccccCcCCccCcccceEEEEeecCCCCCCHHHHHHHHHhCCC
Q 024065 155 SMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYGSVKRVYLVCEEDIGLPKQFQHWMIQNYPV 234 (273)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~ 234 (273)
.+....+................ +++....+.++|.++|.|..|.++.++....+...+|+
T Consensus 230 ------dY~~~gi~~~l~tp~f~~L~~iv-------------DP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G 290 (367)
T PF10142_consen 230 ------DYYNEGITQQLDTPEFDKLMQIV-------------DPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPG 290 (367)
T ss_pred ------hhhHhCchhhcCCHHHHHHHHhc-------------CHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCC
Confidence 11111111111111111111111 11111223389999999999999999999999999986
Q ss_pred c-eEEEEecCCccccccChHhHHHHHHHHHhccc
Q 024065 235 N-EVMEIKGGDHMAMLSDPQKLCDCLSQISLNRH 267 (273)
Q Consensus 235 ~-~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 267 (273)
- .+..+|+++|.... ..+.+.|..|+....
T Consensus 291 ~K~lr~vPN~~H~~~~---~~~~~~l~~f~~~~~ 321 (367)
T PF10142_consen 291 EKYLRYVPNAGHSLIG---SDVVQSLRAFYNRIQ 321 (367)
T ss_pred CeeEEeCCCCCcccch---HHHHHHHHHHHHHHH
Confidence 4 68899999998876 566677888887654
No 179
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.09 E-value=1.3e-05 Score=66.55 Aligned_cols=106 Identities=12% Similarity=0.057 Sum_probs=62.4
Q ss_pred CCCceEEEEccCCC---chhhHHHHHHHHhhC--CcEEEEeccC----CCCCCCCC-cCCCcchhhchH---HHHHHHHh
Q 024065 7 MEEKHFVLVHGVNH---GAWCWYKLKARLVAG--GHRVTAVDLA----ASGINMKR-IEDVHTFHAYSE---PLMEVLAS 73 (273)
Q Consensus 7 ~~~~~vv~lhG~~~---~~~~~~~~~~~l~~~--g~~vi~~d~~----G~G~s~~~-~~~~~~~~~~~~---~l~~~l~~ 73 (273)
...|.||++||.+. +...+ ....|... ++-|+++++| |+..+... ......+.|... .+.+-++.
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~ 170 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAA 170 (493)
T ss_pred CCCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHH
Confidence 44789999999642 22221 22333333 3899999999 33333211 111122333333 33333444
Q ss_pred C-CCCCcEEEEEechhHHHHHHHHHH--CCCccceeEEeeccCC
Q 024065 74 L-PAEEKVILVGHSLGGVTLALAADK--FPHKISVAVFVTAFMP 114 (273)
Q Consensus 74 ~-~~~~~~~lvG~S~Gg~~a~~~a~~--~p~~v~~lil~~~~~~ 114 (273)
. .+.++|.|+|+|.||..+..++.. .+..++++|+.++...
T Consensus 171 fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 171 FGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred hCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 3 345689999999999988877654 2346889998887543
No 180
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.07 E-value=5.6e-06 Score=57.92 Aligned_cols=110 Identities=19% Similarity=0.160 Sum_probs=71.2
Q ss_pred cCCCCceEEEEccCCCchhhHH---HHHHHHhhCCcEEEEecc--CCC---CCCCC-CcC---------------CCcch
Q 024065 5 VGMEEKHFVLVHGVNHGAWCWY---KLKARLVAGGHRVTAVDL--AAS---GINMK-RIE---------------DVHTF 60 (273)
Q Consensus 5 ~g~~~~~vv~lhG~~~~~~~~~---~~~~~l~~~g~~vi~~d~--~G~---G~s~~-~~~---------------~~~~~ 60 (273)
.|+.-|++.++-|+.++.+.|- .+.+.-+++|+.|+.+|- ||. |.++. +.. ..+.+
T Consensus 40 ~~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrM 119 (283)
T KOG3101|consen 40 RGKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRM 119 (283)
T ss_pred cCCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhH
Confidence 3445689999999999998873 344455677899999984 343 11110 000 01122
Q ss_pred hhc-hHHHHHHHHhC---CCCCcEEEEEechhHHHHHHHHHHCCCccceeEEeeccCC
Q 024065 61 HAY-SEPLMEVLASL---PAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMP 114 (273)
Q Consensus 61 ~~~-~~~l~~~l~~~---~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 114 (273)
.++ ++.+-+++..- -...++.|.||||||.=|+-.+.+.|.+.+++-..+|...
T Consensus 120 YdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~N 177 (283)
T KOG3101|consen 120 YDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICN 177 (283)
T ss_pred HHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccC
Confidence 222 34444555421 1345789999999999999888899999888887776543
No 181
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.03 E-value=8.4e-05 Score=52.27 Aligned_cols=105 Identities=22% Similarity=0.276 Sum_probs=64.9
Q ss_pred CCceEEEEccCCCc-hhhHHH---------------HHHHHhhCCcEEEEeccCC---CCCCCCCcC-CCcchhhchHHH
Q 024065 8 EEKHFVLVHGVNHG-AWCWYK---------------LKARLVAGGHRVTAVDLAA---SGINMKRIE-DVHTFHAYSEPL 67 (273)
Q Consensus 8 ~~~~vv~lhG~~~~-~~~~~~---------------~~~~l~~~g~~vi~~d~~G---~G~s~~~~~-~~~~~~~~~~~l 67 (273)
....+|++||.|-- ..+|.+ ++++-.+.||.|++.+.-- +-.+...+. ...+..+.+.-+
T Consensus 100 ~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yv 179 (297)
T KOG3967|consen 100 PQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYV 179 (297)
T ss_pred ccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHH
Confidence 35589999998743 344632 3344455699999987431 222222111 111222222222
Q ss_pred -HHHHHhCCCCCcEEEEEechhHHHHHHHHHHCCC--ccceeEEeeccC
Q 024065 68 -MEVLASLPAEEKVILVGHSLGGVTLALAADKFPH--KISVAVFVTAFM 113 (273)
Q Consensus 68 -~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~--~v~~lil~~~~~ 113 (273)
..++... ..+.+.+|.||.||...+.+..++|+ +|.++.+.++++
T Consensus 180 w~~~v~pa-~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~ 227 (297)
T KOG3967|consen 180 WKNIVLPA-KAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAM 227 (297)
T ss_pred HHHHhccc-CcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccc
Confidence 2333334 66899999999999999999999984 677788777663
No 182
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=98.03 E-value=0.00063 Score=53.33 Aligned_cols=63 Identities=14% Similarity=-0.011 Sum_probs=44.8
Q ss_pred cceEEEEeecCCCCCCHHHHHHHHHhCC----CceEEEE-----------ecCCccccccChHhHHHHHHHHHhcccc
Q 024065 206 SVKRVYLVCEEDIGLPKQFQHWMIQNYP----VNEVMEI-----------KGGDHMAMLSDPQKLCDCLSQISLNRHD 268 (273)
Q Consensus 206 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~-----------~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 268 (273)
++-.+..|+..|..+|.+.-+.+.+.+. +++++.+ .+..|.+-+..-.-+.+.+-..|++...
T Consensus 293 ~~~yvsYHs~~D~~~p~~~K~~l~~~l~~lgfda~l~lIkdes~iDGkfIKnl~HGmgis~k~Lf~KeLp~~lek~~~ 370 (403)
T PF11144_consen 293 KIIYVSYHSIKDDLAPAEDKEELYEILKNLGFDATLHLIKDESEIDGKFIKNLEHGMGISDKALFKKELPLMLEKLQG 370 (403)
T ss_pred ceEEEEEeccCCCCCCHHHHHHHHHHHHHcCCCeEEEEecChhhccchheeccccCCCCCHHHHHHHHhHHHHHHhhc
Confidence 4456778999999999998877766543 5677776 3467877776666667777666666443
No 183
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.01 E-value=0.00043 Score=57.14 Aligned_cols=106 Identities=12% Similarity=0.204 Sum_probs=73.1
Q ss_pred CceEEEEccCCCchh--hHHHHHHHHhhCCcEEEEeccCCCCCCCC-------CcCCCcchhhchHHHHHHHHhC-CCCC
Q 024065 9 EKHFVLVHGVNHGAW--CWYKLKARLVAGGHRVTAVDLAASGINMK-------RIEDVHTFHAYSEPLMEVLASL-PAEE 78 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~--~~~~~~~~l~~~g~~vi~~d~~G~G~s~~-------~~~~~~~~~~~~~~l~~~l~~~-~~~~ 78 (273)
.|.+|.--|.-+.+. .|....-.|.++|+--...-.||=|.-.. ......|+.|+.+....+++.- ...+
T Consensus 448 ~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~ 527 (682)
T COG1770 448 APLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPD 527 (682)
T ss_pred CcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCCcc
Confidence 666666555433222 14444445778887544456677554332 1223358888888777777664 3456
Q ss_pred cEEEEEechhHHHHHHHHHHCCCccceeEEeeccCC
Q 024065 79 KVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMP 114 (273)
Q Consensus 79 ~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 114 (273)
.++++|-|.||+++-..+...|+.++++|+-.|++.
T Consensus 528 ~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVD 563 (682)
T COG1770 528 RIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVD 563 (682)
T ss_pred ceEEeccCchhHHHHHHHhhChhhhhheeecCCccc
Confidence 899999999999999999999999999998888754
No 184
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=97.92 E-value=0.001 Score=53.57 Aligned_cols=60 Identities=12% Similarity=0.136 Sum_probs=49.3
Q ss_pred ceEEEEeecCCCCCCHHHHHHHHHhC-------------------------CCceEEEEecCCccccccChHhHHHHHHH
Q 024065 207 VKRVYLVCEEDIGLPKQFQHWMIQNY-------------------------PVNEVMEIKGGDHMAMLSDPQKLCDCLSQ 261 (273)
Q Consensus 207 ~Pvl~i~g~~D~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~gH~~~~~~~~~~~~~i~~ 261 (273)
.++|+..|+.|.+||.-..+.+.+.+ .+..+..+.||||+...++|+.....+..
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~~ 443 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQR 443 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHHH
Confidence 79999999999999987776654332 12345788899999999999999999999
Q ss_pred HHhcc
Q 024065 262 ISLNR 266 (273)
Q Consensus 262 fl~~~ 266 (273)
|+...
T Consensus 444 fl~g~ 448 (454)
T KOG1282|consen 444 FLNGQ 448 (454)
T ss_pred HHcCC
Confidence 99864
No 185
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.83 E-value=0.00023 Score=51.82 Aligned_cols=91 Identities=21% Similarity=0.194 Sum_probs=57.3
Q ss_pred eEEEEccCC--Cchh-hHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHH----HHHHHhC---CC----
Q 024065 11 HFVLVHGVN--HGAW-CWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPL----MEVLASL---PA---- 76 (273)
Q Consensus 11 ~vv~lhG~~--~~~~-~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l----~~~l~~~---~~---- 76 (273)
.|=|+-|.. .... .|+.+.+.|+++||.|++.-+.- | ++-...++.+ ...++.+ .+
T Consensus 19 vihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-t---------fDH~~~A~~~~~~f~~~~~~L~~~~~~~~~ 88 (250)
T PF07082_consen 19 VIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-T---------FDHQAIAREVWERFERCLRALQKRGGLDPA 88 (250)
T ss_pred EEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-C---------CcHHHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 455666653 3333 38899999999999999987741 1 1222222221 2222222 11
Q ss_pred CCcEEEEEechhHHHHHHHHHHCCCccceeEEeec
Q 024065 77 EEKVILVGHSLGGVTLALAADKFPHKISVAVFVTA 111 (273)
Q Consensus 77 ~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~ 111 (273)
.-+++-+|||+|+.+-+.+...++..-++-++++-
T Consensus 89 ~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 89 YLPVYGVGHSLGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred cCCeeeeecccchHHHHHHhhhccCcccceEEEec
Confidence 23788999999999988888887655577777763
No 186
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.80 E-value=0.00013 Score=56.64 Aligned_cols=105 Identities=19% Similarity=0.121 Sum_probs=75.6
Q ss_pred CceEEEEccCCCchhhHHH---HHHHHhh-CCcEEEEeccCCCCCCCCCcC---------CCcchhhchHHHHHHHHhC-
Q 024065 9 EKHFVLVHGVNHGAWCWYK---LKARLVA-GGHRVTAVDLAASGINMKRIE---------DVHTFHAYSEPLMEVLASL- 74 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~~~---~~~~l~~-~g~~vi~~d~~G~G~s~~~~~---------~~~~~~~~~~~l~~~l~~~- 74 (273)
+.||+|--|.-++.+.|.. ++-.++. .+.-++..+.|-+|+|.+--. ...+.++-.+|...++..+
T Consensus 80 ~gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK 159 (492)
T KOG2183|consen 80 EGPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLK 159 (492)
T ss_pred CCceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHh
Confidence 3688888898877776632 2223332 245689999999999964211 2235666677777777777
Q ss_pred ----CCCCcEEEEEechhHHHHHHHHHHCCCccceeEEeeccC
Q 024065 75 ----PAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFM 113 (273)
Q Consensus 75 ----~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~ 113 (273)
....+++.+|-|.||++|..+=.+||+.|.+.+.-++++
T Consensus 160 ~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPv 202 (492)
T KOG2183|consen 160 RDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPV 202 (492)
T ss_pred hccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCce
Confidence 234689999999999999999999999988877666544
No 187
>COG0627 Predicted esterase [General function prediction only]
Probab=97.79 E-value=0.0001 Score=56.56 Aligned_cols=110 Identities=15% Similarity=0.215 Sum_probs=68.8
Q ss_pred CCCceEEEEccCCCchhhH---HHHHHHHhhCCcEEEEeccC--------------CCCCCCC------CcCC-Ccchhh
Q 024065 7 MEEKHFVLVHGVNHGAWCW---YKLKARLVAGGHRVTAVDLA--------------ASGINMK------RIED-VHTFHA 62 (273)
Q Consensus 7 ~~~~~vv~lhG~~~~~~~~---~~~~~~l~~~g~~vi~~d~~--------------G~G~s~~------~~~~-~~~~~~ 62 (273)
..-|+++++||..++...| ..+-......|+.++++|-. |-+.|=. +... .+.+++
T Consensus 52 ~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~t 131 (316)
T COG0627 52 RDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWET 131 (316)
T ss_pred CCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhH
Confidence 3457788899998886443 34444555567777776322 3222210 0001 134444
Q ss_pred c-hHHHHHHHHhCCC-C---CcEEEEEechhHHHHHHHHHHCCCccceeEEeeccCCCC
Q 024065 63 Y-SEPLMEVLASLPA-E---EKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDT 116 (273)
Q Consensus 63 ~-~~~l~~~l~~~~~-~---~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~ 116 (273)
+ .+++-+.+++... . .+..++||||||.=|+.+|.++|++++.+..+++.....
T Consensus 132 fl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 132 FLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred HHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 4 3455544443312 1 278999999999999999999999999999888865433
No 188
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.77 E-value=7.2e-05 Score=51.54 Aligned_cols=38 Identities=24% Similarity=0.287 Sum_probs=30.7
Q ss_pred CCCcEEEEEechhHHHHHHHHHHCCC----ccceeEEeeccC
Q 024065 76 AEEKVILVGHSLGGVTLALAADKFPH----KISVAVFVTAFM 113 (273)
Q Consensus 76 ~~~~~~lvG~S~Gg~~a~~~a~~~p~----~v~~lil~~~~~ 113 (273)
+..+++++|||+||.+|..++..... .+..++.++++.
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 67899999999999999998887754 566677777653
No 189
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.75 E-value=0.00022 Score=56.78 Aligned_cols=108 Identities=17% Similarity=0.116 Sum_probs=80.3
Q ss_pred CCCceEEEEccCCCchhhHH-----HHHHHHhhCCcEEEEeccCCCCCCCCCcC------CCcchhhchHHHHHHHHhC-
Q 024065 7 MEEKHFVLVHGVNHGAWCWY-----KLKARLVAGGHRVTAVDLAASGINMKRIE------DVHTFHAYSEPLMEVLASL- 74 (273)
Q Consensus 7 ~~~~~vv~lhG~~~~~~~~~-----~~~~~l~~~g~~vi~~d~~G~G~s~~~~~------~~~~~~~~~~~l~~~l~~~- 74 (273)
.++|..|+|-|=+.-...|- .+...-.+.|-.|+.+++|-+|.|.+..+ ...+..+...|+.++|+++
T Consensus 84 ~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n 163 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMN 163 (514)
T ss_pred CCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHH
Confidence 45788888888665554451 23333344578999999999998865433 1236778888999999887
Q ss_pred -----CCCCcEEEEEechhHHHHHHHHHHCCCccceeEEeeccCC
Q 024065 75 -----PAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMP 114 (273)
Q Consensus 75 -----~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 114 (273)
....+.+.+|-|+-|.++..+=..+|+.+.+.|.-++++.
T Consensus 164 ~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~ 208 (514)
T KOG2182|consen 164 AKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVL 208 (514)
T ss_pred hhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccccccee
Confidence 1224899999999999999999999999999887776543
No 190
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=97.71 E-value=0.0004 Score=57.02 Aligned_cols=103 Identities=13% Similarity=0.189 Sum_probs=70.8
Q ss_pred CceEEEEccCCCchhh----HHHHHHHHhhCCcEEEEeccCCCCCCCC-------CcCCCcchhhchHHHHHHHHhC-CC
Q 024065 9 EKHFVLVHGVNHGAWC----WYKLKARLVAGGHRVTAVDLAASGINMK-------RIEDVHTFHAYSEPLMEVLASL-PA 76 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~----~~~~~~~l~~~g~~vi~~d~~G~G~s~~-------~~~~~~~~~~~~~~l~~~l~~~-~~ 76 (273)
+|.+|..+|. -... |+.--..|.++|+-....|.||=|.-.. ......+++++..-...+++.- ..
T Consensus 470 ~P~LLygYGa--y~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~ 547 (712)
T KOG2237|consen 470 KPLLLYGYGA--YGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQ 547 (712)
T ss_pred CceEEEEecc--cceeeccccccceeEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCC
Confidence 6655555543 3332 4433334556888777789999665432 1112347777777666666653 35
Q ss_pred CCcEEEEEechhHHHHHHHHHHCCCccceeEEeeccC
Q 024065 77 EEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFM 113 (273)
Q Consensus 77 ~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~ 113 (273)
..+..+.|.|-||.++..++.++|+.+.++|+-.|++
T Consensus 548 ~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~Vpfm 584 (712)
T KOG2237|consen 548 PSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFM 584 (712)
T ss_pred ccceeEecccCccchhHHHhccCchHhhhhhhcCcce
Confidence 5789999999999999999999999999999877764
No 191
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.64 E-value=0.00012 Score=60.00 Aligned_cols=85 Identities=18% Similarity=0.219 Sum_probs=54.8
Q ss_pred hhHHHHHHHHhhCCcE-----EEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhC---CCCCcEEEEEechhHHHHHH
Q 024065 23 WCWYKLKARLVAGGHR-----VTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL---PAEEKVILVGHSLGGVTLAL 94 (273)
Q Consensus 23 ~~~~~~~~~l~~~g~~-----vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~lvG~S~Gg~~a~~ 94 (273)
..|..+++.|.+.||. ...+|+|= |.. ....-+++-..+..+|+.. .+.++++|+||||||.+++.
T Consensus 156 ~vw~kLIe~L~~iGY~~~nL~gAPYDWRl---s~~---~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~ly 229 (642)
T PLN02517 156 FVWAVLIANLARIGYEEKNMYMAAYDWRL---SFQ---NTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLH 229 (642)
T ss_pred eeHHHHHHHHHHcCCCCCceeeccccccc---Ccc---chhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHH
Confidence 3578999999998885 23345551 110 0112234444455555543 35689999999999999999
Q ss_pred HHHHCC---------------CccceeEEeeccC
Q 024065 95 AADKFP---------------HKISVAVFVTAFM 113 (273)
Q Consensus 95 ~a~~~p---------------~~v~~lil~~~~~ 113 (273)
+...-. ..|++.|.++++.
T Consensus 230 FL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 230 FMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred HHHhccccccccCCcchHHHHHHHHHheeccccc
Confidence 876321 1378888888754
No 192
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.60 E-value=0.00029 Score=59.22 Aligned_cols=107 Identities=13% Similarity=0.049 Sum_probs=58.7
Q ss_pred CCceEEEEccCC---Cch-hhHHHHHHHHhhCCcEEEEeccC----CCCCCCCCc--CCCcchhhchHHHH---HHHHhC
Q 024065 8 EEKHFVLVHGVN---HGA-WCWYKLKARLVAGGHRVTAVDLA----ASGINMKRI--EDVHTFHAYSEPLM---EVLASL 74 (273)
Q Consensus 8 ~~~~vv~lhG~~---~~~-~~~~~~~~~l~~~g~~vi~~d~~----G~G~s~~~~--~~~~~~~~~~~~l~---~~l~~~ 74 (273)
..|++|+|||.+ ++. .....-...+.+++.-|+++++| |+-.+.... ...+-+.|+...|. +-|...
T Consensus 124 ~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~F 203 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAF 203 (535)
T ss_dssp SEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGG
T ss_pred ccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhhc
Confidence 369999999974 222 12222233445567999999998 443332211 12345555554443 334444
Q ss_pred -CCCCcEEEEEechhHHHHHHHHHH--CCCccceeEEeeccCC
Q 024065 75 -PAEEKVILVGHSLGGVTLALAADK--FPHKISVAVFVTAFMP 114 (273)
Q Consensus 75 -~~~~~~~lvG~S~Gg~~a~~~a~~--~p~~v~~lil~~~~~~ 114 (273)
++.++|.|+|||.||..+...... -...+.++|+.++...
T Consensus 204 GGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 204 GGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSAL 246 (535)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TT
T ss_pred ccCCcceeeeeecccccccceeeeccccccccccccccccccc
Confidence 344689999999999966554433 2357999999998543
No 193
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=97.59 E-value=0.0004 Score=53.92 Aligned_cols=88 Identities=19% Similarity=0.154 Sum_probs=63.0
Q ss_pred CceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhC---CCCCcEEEEEe
Q 024065 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL---PAEEKVILVGH 85 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~lvG~ 85 (273)
...-||.-|=|+-...=..+...|.++|+.|+.+|-.-+=.|. .+.++.++|+..+++.. -+..++.|+|+
T Consensus 260 d~~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~------rtPe~~a~Dl~r~i~~y~~~w~~~~~~liGy 333 (456)
T COG3946 260 DTVAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSE------RTPEQIAADLSRLIRFYARRWGAKRVLLIGY 333 (456)
T ss_pred ceEEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhcc------CCHHHHHHHHHHHHHHHHHhhCcceEEEEee
Confidence 3344555554443333356888999999999999965444443 37788888988888776 26689999999
Q ss_pred chhHHHHHHHHHHCCCc
Q 024065 86 SLGGVTLALAADKFPHK 102 (273)
Q Consensus 86 S~Gg~~a~~~a~~~p~~ 102 (273)
|+|+-+.-....+.|..
T Consensus 334 SfGADvlP~~~n~L~~~ 350 (456)
T COG3946 334 SFGADVLPFAYNRLPPA 350 (456)
T ss_pred cccchhhHHHHHhCCHH
Confidence 99999877766666643
No 194
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.59 E-value=0.0019 Score=45.13 Aligned_cols=107 Identities=21% Similarity=0.181 Sum_probs=65.9
Q ss_pred CCceEEEEccCCCchhhHH--------HHHH----HHh--hCCcEEEEeccCCCCCCCC-Cc--CCCcchhhchHHHHHH
Q 024065 8 EEKHFVLVHGVNHGAWCWY--------KLKA----RLV--AGGHRVTAVDLAASGINMK-RI--EDVHTFHAYSEPLMEV 70 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~--------~~~~----~l~--~~g~~vi~~d~~G~G~s~~-~~--~~~~~~~~~~~~l~~~ 70 (273)
.....++++|.+.+..... .+.+ .+. ..+-.|-++-|.|+-.-.. .. .....-+.-+.+|..+
T Consensus 18 A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~A~~ga~~L~~f 97 (177)
T PF06259_consen 18 ADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGYARAGAPRLARF 97 (177)
T ss_pred cCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchHHHHHHHHHHHH
Confidence 3567899999886665321 1111 111 1123455555555432211 00 0112345556777777
Q ss_pred HHhC----CCCCcEEEEEechhHHHHHHHHHHCCCccceeEEeeccCC
Q 024065 71 LASL----PAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMP 114 (273)
Q Consensus 71 l~~~----~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 114 (273)
++.+ .....+.++|||+|+.++-.++...+..++.+|+++++..
T Consensus 98 ~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~ 145 (177)
T PF06259_consen 98 LDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGM 145 (177)
T ss_pred HHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCC
Confidence 7777 2455899999999999999988776778999999987643
No 195
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.55 E-value=0.0002 Score=48.48 Aligned_cols=37 Identities=30% Similarity=0.536 Sum_probs=29.1
Q ss_pred hhchHHHHHHHHhCCCCCcEEEEEechhHHHHHHHHHH
Q 024065 61 HAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADK 98 (273)
Q Consensus 61 ~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~ 98 (273)
+...+.+.++++.. +..++++.|||+||.+|..++..
T Consensus 48 ~~~~~~l~~~~~~~-~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 48 DQILDALKELVEKY-PDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHS-TTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcc-cCccchhhccchHHHHHHHHHHh
Confidence 35556677766666 56899999999999999888765
No 196
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.48 E-value=0.00047 Score=50.39 Aligned_cols=46 Identities=24% Similarity=0.222 Sum_probs=34.3
Q ss_pred HHHHHHhCCCCCcEEEEEechhHHHHHHHHHHCC----CccceeEEeeccCC
Q 024065 67 LMEVLASLPAEEKVILVGHSLGGVTLALAADKFP----HKISVAVFVTAFMP 114 (273)
Q Consensus 67 l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p----~~v~~lil~~~~~~ 114 (273)
+..+++.. + +++++.|||.||.+|..++...+ ++|.++...+++..
T Consensus 75 l~~~~~~~-~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf 124 (224)
T PF11187_consen 75 LKKIAKKY-P-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGF 124 (224)
T ss_pred HHHHHHhC-C-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCC
Confidence 34444444 3 35999999999999999988744 57889888887643
No 197
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.48 E-value=0.00023 Score=56.41 Aligned_cols=87 Identities=22% Similarity=0.253 Sum_probs=56.2
Q ss_pred hhHHHHHHHHhhCCcE------EEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEechhHHHHHHHH
Q 024065 23 WCWYKLKARLVAGGHR------VTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAA 96 (273)
Q Consensus 23 ~~~~~~~~~l~~~g~~------vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a 96 (273)
..|..+++.|..-||. -..+|+|=.-.+... ....+..+...|+...+.- +.++++||+||||+.+.+.+.
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~~~e~--rd~yl~kLK~~iE~~~~~~-G~kkVvlisHSMG~l~~lyFl 200 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRLSYHNSEE--RDQYLSKLKKKIETMYKLN-GGKKVVLISHSMGGLYVLYFL 200 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhhccCChhH--HHHHHHHHHHHHHHHHHHc-CCCceEEEecCCccHHHHHHH
Confidence 4789999999988876 356788731111100 1123333444343333333 779999999999999999999
Q ss_pred HHCCC--------ccceeEEeecc
Q 024065 97 DKFPH--------KISVAVFVTAF 112 (273)
Q Consensus 97 ~~~p~--------~v~~lil~~~~ 112 (273)
..+++ -|++++-++++
T Consensus 201 ~w~~~~~~~W~~k~I~sfvnig~p 224 (473)
T KOG2369|consen 201 KWVEAEGPAWCDKYIKSFVNIGAP 224 (473)
T ss_pred hcccccchhHHHHHHHHHHccCch
Confidence 88876 26666666543
No 198
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.40 E-value=0.00094 Score=53.50 Aligned_cols=107 Identities=14% Similarity=0.041 Sum_probs=64.1
Q ss_pred CCCceEEEEccCC---CchhhHHHHHHHHhhCC-cEEEEeccC----CCCC-CCCC--c--CCCcchhhchH---HHHHH
Q 024065 7 MEEKHFVLVHGVN---HGAWCWYKLKARLVAGG-HRVTAVDLA----ASGI-NMKR--I--EDVHTFHAYSE---PLMEV 70 (273)
Q Consensus 7 ~~~~~vv~lhG~~---~~~~~~~~~~~~l~~~g-~~vi~~d~~----G~G~-s~~~--~--~~~~~~~~~~~---~l~~~ 70 (273)
++.|++|+|||.+ ++......--..|+++| +-|+++++| |+-. |+-. . .....+.|++. .+.+-
T Consensus 92 ~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~N 171 (491)
T COG2272 92 EKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRDN 171 (491)
T ss_pred CCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHHH
Confidence 3469999999974 23322222234577777 888888887 2211 1111 0 01123444433 33444
Q ss_pred HHhC-CCCCcEEEEEechhHHHHHHHHHHCC---CccceeEEeeccCC
Q 024065 71 LASL-PAEEKVILVGHSLGGVTLALAADKFP---HKISVAVFVTAFMP 114 (273)
Q Consensus 71 l~~~-~~~~~~~lvG~S~Gg~~a~~~a~~~p---~~v~~lil~~~~~~ 114 (273)
|+++ ++.++|.|+|+|.||+.++.+.+ .| ..+.++|+.++...
T Consensus 172 Ie~FGGDp~NVTl~GeSAGa~si~~Lla-~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 172 IEAFGGDPQNVTLFGESAGAASILTLLA-VPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHhCCCccceEEeeccchHHHHHHhhc-CccchHHHHHHHHhCCCCC
Confidence 5555 45578999999999997766653 34 36788888887654
No 199
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.38 E-value=0.0016 Score=43.81 Aligned_cols=81 Identities=16% Similarity=0.137 Sum_probs=54.7
Q ss_pred CCceEEEEccCCCchhhHHHHHHHHhhCCcE-EEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEec
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHR-VTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHS 86 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~-vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S 86 (273)
+...||++-||+..+.....+. +.+ ++. ++++|++..... +++. ..+.+.+|++|
T Consensus 10 gd~LIvyFaGwgtpps~v~HLi--lpe-N~dl~lcYDY~dl~ld-------fDfs--------------Ay~hirlvAwS 65 (214)
T COG2830 10 GDHLIVYFAGWGTPPSAVNHLI--LPE-NHDLLLCYDYQDLNLD-------FDFS--------------AYRHIRLVAWS 65 (214)
T ss_pred CCEEEEEEecCCCCHHHHhhcc--CCC-CCcEEEEeehhhcCcc-------cchh--------------hhhhhhhhhhh
Confidence 3458999999999888776655 223 354 678888632111 1111 23567789999
Q ss_pred hhHHHHHHHHHHCCCccceeEEeeccCC
Q 024065 87 LGGVTLALAADKFPHKISVAVFVTAFMP 114 (273)
Q Consensus 87 ~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 114 (273)
||-.+|-++....+ .++.+.+++...
T Consensus 66 MGVwvAeR~lqg~~--lksatAiNGTgL 91 (214)
T COG2830 66 MGVWVAERVLQGIR--LKSATAINGTGL 91 (214)
T ss_pred HHHHHHHHHHhhcc--ccceeeecCCCC
Confidence 99999999987764 667777776543
No 200
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.30 E-value=0.01 Score=46.11 Aligned_cols=63 Identities=17% Similarity=0.159 Sum_probs=48.8
Q ss_pred cceEEEEeecCCCCCCHHHHHHHHHhC----CCceEEEEecCCcccccc-ChHhHHHHHHHHHhcccc
Q 024065 206 SVKRVYLVCEEDIGLPKQFQHWMIQNY----PVNEVMEIKGGDHMAMLS-DPQKLCDCLSQISLNRHD 268 (273)
Q Consensus 206 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~~~~ 268 (273)
..+.+.+.+..|.++|.+..+++.+.. -+++..-+.++-|..++. .|..+.+...+|++....
T Consensus 225 ~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~~ 292 (350)
T KOG2521|consen 225 PWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVIS 292 (350)
T ss_pred cccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhccc
Confidence 457888889999999999888774332 245666667899988774 788999999999987653
No 201
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.25 E-value=0.00059 Score=50.33 Aligned_cols=50 Identities=22% Similarity=0.377 Sum_probs=39.1
Q ss_pred HHHHHHHHhC--CCCCcEEEEEechhHHHHHHHHHHCCCccceeEEeeccCC
Q 024065 65 EPLMEVLASL--PAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMP 114 (273)
Q Consensus 65 ~~l~~~l~~~--~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 114 (273)
+++.-++++- ...++-.++|||+||.+++.....+|+.+...++++|...
T Consensus 122 ~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlW 173 (264)
T COG2819 122 EQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLW 173 (264)
T ss_pred HhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchhh
Confidence 3344444441 2445689999999999999999999999999999998643
No 202
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=97.21 E-value=0.0014 Score=46.23 Aligned_cols=53 Identities=19% Similarity=0.218 Sum_probs=38.3
Q ss_pred hhchHHHHHHHHhCCCCCcEEEEEechhHHHHHHHHHH--C----CCccceeEEeeccCC
Q 024065 61 HAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADK--F----PHKISVAVFVTAFMP 114 (273)
Q Consensus 61 ~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~--~----p~~v~~lil~~~~~~ 114 (273)
.++.+.+.+....- ...+++|+|+|.|+.++..++.. . .++|.++++++-+..
T Consensus 65 ~~~~~~i~~~~~~C-P~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 65 ANLVRLIEEYAARC-PNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRR 123 (179)
T ss_dssp HHHHHHHHHHHHHS-TTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTT
T ss_pred HHHHHHHHHHHHhC-CCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcc
Confidence 34444444555555 66899999999999999999877 2 257889999986543
No 203
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=97.14 E-value=0.0022 Score=56.86 Aligned_cols=96 Identities=16% Similarity=0.192 Sum_probs=70.7
Q ss_pred CCCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEec
Q 024065 7 MEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHS 86 (273)
Q Consensus 7 ~~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S 86 (273)
+..|++.|+|..-+....+..++..|. .|.+|.-....-...++++.+.-...-++++....|..++|+|
T Consensus 2121 se~~~~Ffv~pIEG~tt~l~~la~rle----------~PaYglQ~T~~vP~dSies~A~~yirqirkvQP~GPYrl~GYS 2190 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTALESLASRLE----------IPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQPEGPYRLAGYS 2190 (2376)
T ss_pred ccCCceEEEeccccchHHHHHHHhhcC----------CcchhhhccccCCcchHHHHHHHHHHHHHhcCCCCCeeeeccc
Confidence 358999999999888777777766553 2333332222223358999999888888888677899999999
Q ss_pred hhHHHHHHHHHHCC--CccceeEEeecc
Q 024065 87 LGGVTLALAADKFP--HKISVAVFVTAF 112 (273)
Q Consensus 87 ~Gg~~a~~~a~~~p--~~v~~lil~~~~ 112 (273)
+|+.++..+|.... +....+|++++.
T Consensus 2191 yG~~l~f~ma~~Lqe~~~~~~lillDGs 2218 (2376)
T KOG1202|consen 2191 YGACLAFEMASQLQEQQSPAPLILLDGS 2218 (2376)
T ss_pred hhHHHHHHHHHHHHhhcCCCcEEEecCc
Confidence 99999999987543 235568888875
No 204
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=97.13 E-value=0.001 Score=47.47 Aligned_cols=69 Identities=16% Similarity=0.048 Sum_probs=45.4
Q ss_pred HHHhhCCcEEEEeccCCCCCCCCC-----cC---CCcchhhchHHHHHHHHhCCCCCcEEEEEechhHHHHHHHHHHC
Q 024065 30 ARLVAGGHRVTAVDLAASGINMKR-----IE---DVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKF 99 (273)
Q Consensus 30 ~~l~~~g~~vi~~d~~G~G~s~~~-----~~---~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~ 99 (273)
..+... .+|+++=+|-....... .. ......|..+....+|++.++.++++|+|||.|+.++.++..++
T Consensus 40 s~F~~~-~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 40 SAFNGV-CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhhhcC-CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 344444 58888877743221111 10 11345566666677777776678999999999999999998765
No 205
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.12 E-value=0.00096 Score=49.39 Aligned_cols=32 Identities=38% Similarity=0.558 Sum_probs=23.8
Q ss_pred HHHHHHhCCCCCcEEEEEechhHHHHHHHHHHC
Q 024065 67 LMEVLASLPAEEKVILVGHSLGGVTLALAADKF 99 (273)
Q Consensus 67 l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~ 99 (273)
+...++.. ...++++.|||+||.+|..++...
T Consensus 118 ~~~~~~~~-p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 118 LKSALKQY-PDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred HHHHHhhC-CCceEEEEccCHHHHHHHHHHHHH
Confidence 33444444 567899999999999998887653
No 206
>PLN02162 triacylglycerol lipase
Probab=97.05 E-value=0.0017 Score=52.00 Aligned_cols=36 Identities=39% Similarity=0.416 Sum_probs=27.5
Q ss_pred hhchHHHHHHHHhCCCCCcEEEEEechhHHHHHHHHH
Q 024065 61 HAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAAD 97 (273)
Q Consensus 61 ~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~ 97 (273)
.++.+.+.+++.+. ...++++.|||+||.+|..+|.
T Consensus 262 ~~I~~~L~~lL~k~-p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 262 YTIRQMLRDKLARN-KNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHHhC-CCceEEEEecChHHHHHHHHHH
Confidence 34455566666666 6678999999999999988754
No 207
>PLN00413 triacylglycerol lipase
Probab=96.99 E-value=0.0022 Score=51.52 Aligned_cols=35 Identities=34% Similarity=0.447 Sum_probs=29.0
Q ss_pred hchHHHHHHHHhCCCCCcEEEEEechhHHHHHHHHH
Q 024065 62 AYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAAD 97 (273)
Q Consensus 62 ~~~~~l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~ 97 (273)
++.+.+.++++.. +..++++.|||+||.+|..+|.
T Consensus 269 ~i~~~Lk~ll~~~-p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQN-PTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHC-CCCeEEEEecCHHHHHHHHHHH
Confidence 4566777777777 6778999999999999998874
No 208
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=96.89 E-value=0.01 Score=48.92 Aligned_cols=104 Identities=13% Similarity=0.142 Sum_probs=66.5
Q ss_pred CceEEEEccCCCchh--hHHHHHHHHhhCCcEEEEeccCCCCCCCCC-------cCCCcchhhchHHHHHHHHhC-CCCC
Q 024065 9 EKHFVLVHGVNHGAW--CWYKLKARLVAGGHRVTAVDLAASGINMKR-------IEDVHTFHAYSEPLMEVLASL-PAEE 78 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~--~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~-------~~~~~~~~~~~~~l~~~l~~~-~~~~ 78 (273)
.|++|+--|...-+. .|......+.++|..-+.-+.||=|+=.+. ......++|+.+-...+++.- ...+
T Consensus 421 ~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe 500 (648)
T COG1505 421 NPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPE 500 (648)
T ss_pred CceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHH
Confidence 666655544322222 255555666778888888899997654321 111124455555444444432 3446
Q ss_pred cEEEEEechhHHHHHHHHHHCCCccceeEEeecc
Q 024065 79 KVILVGHSLGGVTLALAADKFPHKISVAVFVTAF 112 (273)
Q Consensus 79 ~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~ 112 (273)
++.+.|-|-||.+.-...-++|+.+.++|+--|.
T Consensus 501 ~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPl 534 (648)
T COG1505 501 KLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPL 534 (648)
T ss_pred HhhhccCCCCceEEEeeeccChhhhCceeeccch
Confidence 8899999999999888888999999888765554
No 209
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=96.71 E-value=0.0083 Score=48.43 Aligned_cols=105 Identities=13% Similarity=0.121 Sum_probs=68.3
Q ss_pred CCceEEEEccCCCchhhHHHHHHH-------------------HhhCCcEEEEec-cCCCCCCCCC-cCCCcchhhchHH
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLKAR-------------------LVAGGHRVTAVD-LAASGINMKR-IEDVHTFHAYSEP 66 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~~~-------------------l~~~g~~vi~~d-~~G~G~s~~~-~~~~~~~~~~~~~ 66 (273)
++|.++.+.|.++.+..|-.+.+. +.+. -.++.+| .-|.|.|... .....+.....+|
T Consensus 100 ~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~-adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D 178 (498)
T COG2939 100 NRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDF-ADLVFIDQPVGTGFSRALGDEKKKDFEGAGKD 178 (498)
T ss_pred CCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccC-CceEEEecCcccCcccccccccccchhccchh
Confidence 588999999999999888655321 1112 3689999 5588988741 1122345555555
Q ss_pred HHHHHHhC--------CCCCcEEEEEechhHHHHHHHHHHCCC---ccceeEEeeccC
Q 024065 67 LMEVLASL--------PAEEKVILVGHSLGGVTLALAADKFPH---KISVAVFVTAFM 113 (273)
Q Consensus 67 l~~~l~~~--------~~~~~~~lvG~S~Gg~~a~~~a~~~p~---~v~~lil~~~~~ 113 (273)
+..+.+.+ ....+.+|+|-|+||.-+-.+|...-+ ..++++++.+..
T Consensus 179 ~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvl 236 (498)
T COG2939 179 VYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVL 236 (498)
T ss_pred HHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeee
Confidence 55554433 233599999999999977777765433 356666666544
No 210
>PLN02571 triacylglycerol lipase
Probab=96.70 E-value=0.0027 Score=50.39 Aligned_cols=38 Identities=21% Similarity=0.291 Sum_probs=28.4
Q ss_pred hhchHHHHHHHHhCCCC-CcEEEEEechhHHHHHHHHHH
Q 024065 61 HAYSEPLMEVLASLPAE-EKVILVGHSLGGVTLALAADK 98 (273)
Q Consensus 61 ~~~~~~l~~~l~~~~~~-~~~~lvG~S~Gg~~a~~~a~~ 98 (273)
+++.+++..+++...+. .++++.|||+||.+|...|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 45566777777776222 268999999999999988764
No 211
>PLN02454 triacylglycerol lipase
Probab=96.69 E-value=0.0032 Score=49.93 Aligned_cols=34 Identities=35% Similarity=0.510 Sum_probs=24.1
Q ss_pred hHHHHHHHHhCCCCC--cEEEEEechhHHHHHHHHHH
Q 024065 64 SEPLMEVLASLPAEE--KVILVGHSLGGVTLALAADK 98 (273)
Q Consensus 64 ~~~l~~~l~~~~~~~--~~~lvG~S~Gg~~a~~~a~~ 98 (273)
...+.++++.. ... ++++.|||+||.+|+.+|..
T Consensus 213 l~~V~~l~~~Y-p~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 213 LAKIKELLERY-KDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHhC-CCCCceEEEEecCHHHHHHHHHHHH
Confidence 34445555554 333 49999999999999998854
No 212
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=96.68 E-value=0.0041 Score=46.73 Aligned_cols=53 Identities=17% Similarity=0.299 Sum_probs=39.3
Q ss_pred hhchHHHHHHHHhC----CCCCcEEEEEechhHHHHHHHHHHCCCccceeEEeeccC
Q 024065 61 HAYSEPLMEVLASL----PAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFM 113 (273)
Q Consensus 61 ~~~~~~l~~~l~~~----~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~ 113 (273)
..++.+|.=.++.. .....-+|+|-|+||.+++..+.++|+++..++..+|..
T Consensus 156 ~~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~ 212 (299)
T COG2382 156 RFLAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSF 212 (299)
T ss_pred HHHHHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCcc
Confidence 33444444444443 123457899999999999999999999999999888764
No 213
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=96.58 E-value=0.0036 Score=48.64 Aligned_cols=40 Identities=30% Similarity=0.421 Sum_probs=31.5
Q ss_pred CCCCcEEEEEechhHHHHHHHHHHCCC-----ccceeEEeeccCC
Q 024065 75 PAEEKVILVGHSLGGVTLALAADKFPH-----KISVAVFVTAFMP 114 (273)
Q Consensus 75 ~~~~~~~lvG~S~Gg~~a~~~a~~~p~-----~v~~lil~~~~~~ 114 (273)
.+.+|+.|||||+|+.+.+.......+ .|+.+++++++.+
T Consensus 217 ~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~ 261 (345)
T PF05277_consen 217 QGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVP 261 (345)
T ss_pred CCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCC
Confidence 377799999999999988876654443 3889999987654
No 214
>PLN02408 phospholipase A1
Probab=96.47 E-value=0.0044 Score=48.46 Aligned_cols=37 Identities=30% Similarity=0.406 Sum_probs=26.7
Q ss_pred chHHHHHHHHhCCCC-CcEEEEEechhHHHHHHHHHHC
Q 024065 63 YSEPLMEVLASLPAE-EKVILVGHSLGGVTLALAADKF 99 (273)
Q Consensus 63 ~~~~l~~~l~~~~~~-~~~~lvG~S~Gg~~a~~~a~~~ 99 (273)
..+.+..+++...+. .++++.|||+||.+|..+|...
T Consensus 184 Vl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 184 VREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 345666777666222 3599999999999999887653
No 215
>PLN02934 triacylglycerol lipase
Probab=96.35 E-value=0.0058 Score=49.57 Aligned_cols=36 Identities=31% Similarity=0.413 Sum_probs=29.0
Q ss_pred hhchHHHHHHHHhCCCCCcEEEEEechhHHHHHHHHH
Q 024065 61 HAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAAD 97 (273)
Q Consensus 61 ~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~ 97 (273)
......+.++++.. ...++++.|||+||.+|..++.
T Consensus 305 ~~v~~~lk~ll~~~-p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 305 YAVRSKLKSLLKEH-KNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHC-CCCeEEEeccccHHHHHHHHHH
Confidence 34556677777777 6789999999999999998874
No 216
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=96.30 E-value=0.0065 Score=46.89 Aligned_cols=60 Identities=8% Similarity=0.035 Sum_probs=48.5
Q ss_pred cceEEEEeecCCCCCCHHHHHHHHHhCCCc-eEEEEecCCccccccChHhHHHHHHHHHhcccc
Q 024065 206 SVKRVYLVCEEDIGLPKQFQHWMIQNYPVN-EVMEIKGGDHMAMLSDPQKLCDCLSQISLNRHD 268 (273)
Q Consensus 206 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 268 (273)
.+|..++.|..|..++++.+......+|+. -+..+|+..|... +..+.+.|..|+.+.+.
T Consensus 329 alpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~---n~~i~esl~~flnrfq~ 389 (507)
T COG4287 329 ALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLI---NQFIKESLEPFLNRFQM 389 (507)
T ss_pred cccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhh---HHHHHHHHHHHHHHHhc
Confidence 889999999999999999999999999976 5778999999765 34556667777766543
No 217
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=96.26 E-value=0.015 Score=49.25 Aligned_cols=105 Identities=16% Similarity=0.084 Sum_probs=58.3
Q ss_pred CceEEEEccCCC---chhhHH--HHHHHHhhCCcEEEEeccC----CCCCCCC-CcCCCcchhhchHHHHHH---HHhC-
Q 024065 9 EKHFVLVHGVNH---GAWCWY--KLKARLVAGGHRVTAVDLA----ASGINMK-RIEDVHTFHAYSEPLMEV---LASL- 74 (273)
Q Consensus 9 ~~~vv~lhG~~~---~~~~~~--~~~~~l~~~g~~vi~~d~~----G~G~s~~-~~~~~~~~~~~~~~l~~~---l~~~- 74 (273)
-|++|++||.+- +...+. .....+..+..-|+.+.+| |+..... .....+.+.|+...+.-+ |...
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FG 191 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFG 191 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcC
Confidence 689999999853 222231 1122233334556677766 3322221 112334555555444333 3333
Q ss_pred CCCCcEEEEEechhHHHHHHHHHH--CCCccceeEEeeccC
Q 024065 75 PAEEKVILVGHSLGGVTLALAADK--FPHKISVAVFVTAFM 113 (273)
Q Consensus 75 ~~~~~~~lvG~S~Gg~~a~~~a~~--~p~~v~~lil~~~~~ 113 (273)
++.+++.++|||.||..+..+... ....+.++|.+++..
T Consensus 192 Gdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~ 232 (545)
T KOG1516|consen 192 GDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNA 232 (545)
T ss_pred CCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccc
Confidence 456789999999999987665531 114567777777653
No 218
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=96.23 E-value=0.019 Score=44.81 Aligned_cols=59 Identities=17% Similarity=0.174 Sum_probs=47.6
Q ss_pred cceEEEEeecCCCCCCHHHHHHHHHhCC------------------------C-ceEEEEecCCccccccChHhHHHHHH
Q 024065 206 SVKRVYLVCEEDIGLPKQFQHWMIQNYP------------------------V-NEVMEIKGGDHMAMLSDPQKLCDCLS 260 (273)
Q Consensus 206 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~------------------------~-~~~~~~~~~gH~~~~~~~~~~~~~i~ 260 (273)
.++||+..|+.|.+|+.-..+.+.+.+. + .++..+.+|||+.+ .+|+...+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 5899999999999998776666554431 2 56777779999996 59999999999
Q ss_pred HHHhc
Q 024065 261 QISLN 265 (273)
Q Consensus 261 ~fl~~ 265 (273)
+|+..
T Consensus 312 ~fi~~ 316 (319)
T PLN02213 312 RWISG 316 (319)
T ss_pred HHHcC
Confidence 99975
No 219
>PLN02310 triacylglycerol lipase
Probab=96.20 E-value=0.013 Score=46.50 Aligned_cols=37 Identities=24% Similarity=0.331 Sum_probs=26.2
Q ss_pred hchHHHHHHHHhCC---CCCcEEEEEechhHHHHHHHHHH
Q 024065 62 AYSEPLMEVLASLP---AEEKVILVGHSLGGVTLALAADK 98 (273)
Q Consensus 62 ~~~~~l~~~l~~~~---~~~~~~lvG~S~Gg~~a~~~a~~ 98 (273)
+..+.+..+++... ...++++.|||+||.+|+..|..
T Consensus 190 qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 190 QVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 34455666666541 23479999999999999988753
No 220
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=96.19 E-value=0.005 Score=48.37 Aligned_cols=105 Identities=15% Similarity=0.115 Sum_probs=79.3
Q ss_pred CCCCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcC--CCcchhhchHHHHHHHHhCC--CCCcEE
Q 024065 6 GMEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIE--DVHTFHAYSEPLMEVLASLP--AEEKVI 81 (273)
Q Consensus 6 g~~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~--~~~~~~~~~~~l~~~l~~~~--~~~~~~ 81 (273)
+.++|+|+..-|++.+....+.-...|.+ -+-+.+++|-+|.|.+.+. ...++.+-++|..++++.+. =.++.+
T Consensus 60 ~~drPtV~~T~GY~~~~~p~r~Ept~Lld--~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~kWI 137 (448)
T PF05576_consen 60 DFDRPTVLYTEGYNVSTSPRRSEPTQLLD--GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPGKWI 137 (448)
T ss_pred CCCCCeEEEecCcccccCccccchhHhhc--cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccCCce
Confidence 44689999999998765544332223333 3679999999999976654 23588999999998888771 225677
Q ss_pred EEEechhHHHHHHHHHHCCCccceeEEeecc
Q 024065 82 LVGHSLGGVTLALAADKFPHKISVAVFVTAF 112 (273)
Q Consensus 82 lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~ 112 (273)
--|-|=||+.++.+=.-||+.|++.|...++
T Consensus 138 STG~SKGGmTa~y~rrFyP~DVD~tVaYVAP 168 (448)
T PF05576_consen 138 STGGSKGGMTAVYYRRFYPDDVDGTVAYVAP 168 (448)
T ss_pred ecCcCCCceeEEEEeeeCCCCCCeeeeeecc
Confidence 7899999999999988899999998855544
No 221
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.19 E-value=0.012 Score=46.18 Aligned_cols=85 Identities=22% Similarity=0.280 Sum_probs=50.9
Q ss_pred CceEEEEccCCC-chhhHHHHHHHHhhCCcEEEEeccCCCC-CCCCCcCCC-cchhhchHHHHHHHHhCCCCCcEEEEEe
Q 024065 9 EKHFVLVHGVNH-GAWCWYKLKARLVAGGHRVTAVDLAASG-INMKRIEDV-HTFHAYSEPLMEVLASLPAEEKVILVGH 85 (273)
Q Consensus 9 ~~~vv~lhG~~~-~~~~~~~~~~~l~~~g~~vi~~d~~G~G-~s~~~~~~~-~~~~~~~~~l~~~l~~~~~~~~~~lvG~ 85 (273)
+..+|+.||+-+ +...|...+....+. +.=..+..+|+- ......+.. .-=+..++++.+.+... ..+++..+||
T Consensus 80 ~HLvVlthGi~~~~~~~~~~~~~~~~kk-~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~-si~kISfvgh 157 (405)
T KOG4372|consen 80 KHLVVLTHGLHGADMEYWKEKIEQMTKK-MPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDY-SIEKISFVGH 157 (405)
T ss_pred ceEEEeccccccccHHHHHHHHHhhhcC-CCcceEeeeccccchhhccccceeeecccHHHHhhhhhcc-ccceeeeeee
Confidence 567999999977 667788777776664 322233333332 222221111 11133455555555555 5789999999
Q ss_pred chhHHHHHHH
Q 024065 86 SLGGVTLALA 95 (273)
Q Consensus 86 S~Gg~~a~~~ 95 (273)
|+||.++-.+
T Consensus 158 SLGGLvar~A 167 (405)
T KOG4372|consen 158 SLGGLVARYA 167 (405)
T ss_pred ecCCeeeeEE
Confidence 9999876544
No 222
>PLN02324 triacylglycerol lipase
Probab=96.13 E-value=0.0084 Score=47.58 Aligned_cols=36 Identities=31% Similarity=0.404 Sum_probs=26.4
Q ss_pred chHHHHHHHHhCCC-CCcEEEEEechhHHHHHHHHHH
Q 024065 63 YSEPLMEVLASLPA-EEKVILVGHSLGGVTLALAADK 98 (273)
Q Consensus 63 ~~~~l~~~l~~~~~-~~~~~lvG~S~Gg~~a~~~a~~ 98 (273)
+.+.+..+++...+ ..++++.|||+||.+|...|..
T Consensus 199 Vl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 199 VQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 44556677776622 2369999999999999988754
No 223
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=96.03 E-value=0.015 Score=40.82 Aligned_cols=60 Identities=10% Similarity=0.063 Sum_probs=46.3
Q ss_pred cceEEEEeecCCCCCCHHHHH---HHHHhCCC--ceEEEEecCCccccccCh---HhHHHHHHHHHhc
Q 024065 206 SVKRVYLVCEEDIGLPKQFQH---WMIQNYPV--NEVMEIKGGDHMAMLSDP---QKLCDCLSQISLN 265 (273)
Q Consensus 206 ~~Pvl~i~g~~D~~~~~~~~~---~~~~~~~~--~~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~~ 265 (273)
+++.|-|-|+.|.++.+-... .|...+|. ...++.+|+||+-.+.-+ +++.-.|.+|+.+
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 678888999999999766554 44445553 367788899999888754 7888999999875
No 224
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.00 E-value=0.0067 Score=41.45 Aligned_cols=105 Identities=11% Similarity=0.055 Sum_probs=61.4
Q ss_pred CCCCceEEEEccCCCchhhHHH--HHHHHh---hCC-cEEEEeccCCCCCCCCCcCC---CcchhhchHHHHHHHHhCCC
Q 024065 6 GMEEKHFVLVHGVNHGAWCWYK--LKARLV---AGG-HRVTAVDLAASGINMKRIED---VHTFHAYSEPLMEVLASLPA 76 (273)
Q Consensus 6 g~~~~~vv~lhG~~~~~~~~~~--~~~~l~---~~g-~~vi~~d~~G~G~s~~~~~~---~~~~~~~~~~l~~~l~~~~~ 76 (273)
|..+.+||+++-.++.-..|.. .+..|+ +.| ...++++ |-..-+.-... ...++...+--.-++++. -
T Consensus 23 GHaG~pVvvFpts~Grf~eyed~G~v~ala~fie~G~vQlft~~--gldsESf~a~h~~~adr~~rH~AyerYv~eEa-l 99 (227)
T COG4947 23 GHAGIPVVVFPTSGGRFNEYEDFGMVDALASFIEEGLVQLFTLS--GLDSESFLATHKNAADRAERHRAYERYVIEEA-L 99 (227)
T ss_pred cCCCCcEEEEecCCCcchhhhhcccHHHHHHHHhcCcEEEEEec--ccchHhHhhhcCCHHHHHHHHHHHHHHHHHhh-c
Confidence 4557788888777776666643 233333 233 2344443 32211111110 012222222233344444 3
Q ss_pred CCcEEEEEechhHHHHHHHHHHCCCccceeEEeeccC
Q 024065 77 EEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFM 113 (273)
Q Consensus 77 ~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~~~ 113 (273)
....++-|.||||..|..+.-++|+...++|.+++..
T Consensus 100 pgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvY 136 (227)
T COG4947 100 PGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVY 136 (227)
T ss_pred CCCccccccchhhhhhhhhheeChhHhhhheeeccee
Confidence 3567788999999999999999999999999998763
No 225
>PLN02802 triacylglycerol lipase
Probab=95.93 E-value=0.013 Score=47.67 Aligned_cols=37 Identities=24% Similarity=0.386 Sum_probs=26.4
Q ss_pred hchHHHHHHHHhCCCC-CcEEEEEechhHHHHHHHHHH
Q 024065 62 AYSEPLMEVLASLPAE-EKVILVGHSLGGVTLALAADK 98 (273)
Q Consensus 62 ~~~~~l~~~l~~~~~~-~~~~lvG~S~Gg~~a~~~a~~ 98 (273)
++.+.+..+++...+. .++++.|||+||.+|..+|..
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 3445566666665222 378999999999999987764
No 226
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=95.89 E-value=0.12 Score=32.55 Aligned_cols=85 Identities=20% Similarity=0.196 Sum_probs=58.3
Q ss_pred hhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEechhHH--HHHHHHHHCC
Q 024065 23 WCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGV--TLALAADKFP 100 (273)
Q Consensus 23 ~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg~--~a~~~a~~~p 100 (273)
..|..+.+.+..+|+..=.+.++..|.+-...-....-+.-...+..+++.. ...++++||=|--.= +-..+|.++|
T Consensus 11 nly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~f-P~~kfiLIGDsgq~DpeiY~~ia~~~P 89 (100)
T PF09949_consen 11 NLYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDF-PERKFILIGDSGQHDPEIYAEIARRFP 89 (100)
T ss_pred HHHHHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHC-CCCcEEEEeeCCCcCHHHHHHHHHHCC
Confidence 3356677777777887777888877655332211111134466788888888 889999999775543 4456788999
Q ss_pred CccceeEE
Q 024065 101 HKISVAVF 108 (273)
Q Consensus 101 ~~v~~lil 108 (273)
++|.++.+
T Consensus 90 ~~i~ai~I 97 (100)
T PF09949_consen 90 GRILAIYI 97 (100)
T ss_pred CCEEEEEE
Confidence 99988754
No 227
>PLN03037 lipase class 3 family protein; Provisional
Probab=95.82 E-value=0.013 Score=47.70 Aligned_cols=37 Identities=27% Similarity=0.378 Sum_probs=27.0
Q ss_pred hchHHHHHHHHhCC---CCCcEEEEEechhHHHHHHHHHH
Q 024065 62 AYSEPLMEVLASLP---AEEKVILVGHSLGGVTLALAADK 98 (273)
Q Consensus 62 ~~~~~l~~~l~~~~---~~~~~~lvG~S~Gg~~a~~~a~~ 98 (273)
+..+++..+++... ...++++.|||+||.+|+..|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 34566777776652 23469999999999999888753
No 228
>PLN02753 triacylglycerol lipase
Probab=95.72 E-value=0.015 Score=47.41 Aligned_cols=36 Identities=22% Similarity=0.326 Sum_probs=26.2
Q ss_pred hchHHHHHHHHhCCC----CCcEEEEEechhHHHHHHHHH
Q 024065 62 AYSEPLMEVLASLPA----EEKVILVGHSLGGVTLALAAD 97 (273)
Q Consensus 62 ~~~~~l~~~l~~~~~----~~~~~lvG~S~Gg~~a~~~a~ 97 (273)
++.+.+..+++...+ ..++++.|||+||.+|...|.
T Consensus 292 QVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 292 QILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 344556666665521 358999999999999998875
No 229
>PLN02719 triacylglycerol lipase
Probab=95.68 E-value=0.017 Score=47.10 Aligned_cols=36 Identities=25% Similarity=0.359 Sum_probs=25.5
Q ss_pred chHHHHHHHHhCCC----CCcEEEEEechhHHHHHHHHHH
Q 024065 63 YSEPLMEVLASLPA----EEKVILVGHSLGGVTLALAADK 98 (273)
Q Consensus 63 ~~~~l~~~l~~~~~----~~~~~lvG~S~Gg~~a~~~a~~ 98 (273)
+.+.+..+++.... ..++++.|||+||.+|..+|..
T Consensus 279 Vl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 279 VLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 44555666665521 2379999999999999988753
No 230
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=95.50 E-value=0.012 Score=33.28 Aligned_cols=19 Identities=21% Similarity=0.415 Sum_probs=11.3
Q ss_pred CCCceEEEEccCCCchhhH
Q 024065 7 MEEKHFVLVHGVNHGAWCW 25 (273)
Q Consensus 7 ~~~~~vv~lhG~~~~~~~~ 25 (273)
..+|+|++.||+.+++..|
T Consensus 41 ~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 41 KKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp TT--EEEEE--TT--GGGG
T ss_pred CCCCcEEEECCcccChHHH
Confidence 4589999999999999888
No 231
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=95.39 E-value=0.05 Score=42.53 Aligned_cols=77 Identities=14% Similarity=0.128 Sum_probs=47.8
Q ss_pred cEEEEeccC-CCCCCCCCcCCCcch-hhchHHHHHHHHh----CC--CCCcEEEEEechhHHHHHHHHHH----CC----
Q 024065 37 HRVTAVDLA-ASGINMKRIEDVHTF-HAYSEPLMEVLAS----LP--AEEKVILVGHSLGGVTLALAADK----FP---- 100 (273)
Q Consensus 37 ~~vi~~d~~-G~G~s~~~~~~~~~~-~~~~~~l~~~l~~----~~--~~~~~~lvG~S~Gg~~a~~~a~~----~p---- 100 (273)
.+++.+|.| |.|.|-.......+- ++.++|+..+++. .+ ...+++|.|-|.||..+-.+|.. ..
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~ 81 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 81 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccC
Confidence 368999988 889885432211111 2233555555544 32 45789999999999966655543 21
Q ss_pred --CccceeEEeeccC
Q 024065 101 --HKISVAVFVTAFM 113 (273)
Q Consensus 101 --~~v~~lil~~~~~ 113 (273)
=.++|+++-++..
T Consensus 82 ~~inLkGi~IGNg~t 96 (319)
T PLN02213 82 PPINLQGYMLGNPVT 96 (319)
T ss_pred CceeeeEEEeCCCCC
Confidence 1467888777654
No 232
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=95.24 E-value=0.079 Score=43.77 Aligned_cols=83 Identities=16% Similarity=0.163 Sum_probs=56.4
Q ss_pred HHHHhhCCcEEEEeccCCCCCCCC--CcCCCc-----------chhhchHHHHHHHHhC--CCCCcEEEEEechhHHHHH
Q 024065 29 KARLVAGGHRVTAVDLAASGINMK--RIEDVH-----------TFHAYSEPLMEVLASL--PAEEKVILVGHSLGGVTLA 93 (273)
Q Consensus 29 ~~~l~~~g~~vi~~d~~G~G~s~~--~~~~~~-----------~~~~~~~~l~~~l~~~--~~~~~~~lvG~S~Gg~~a~ 93 (273)
...+ .+||.++.=|- ||..+.. ...... ++.+.+.--.++++.. ...+.-+..|.|.||.-++
T Consensus 53 ~~~~-~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl 130 (474)
T PF07519_consen 53 ATAL-ARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGL 130 (474)
T ss_pred chhh-hcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHH
Confidence 3444 46899999995 7765543 111111 2223333334444444 3456788999999999999
Q ss_pred HHHHHCCCccceeEEeeccC
Q 024065 94 LAADKFPHKISVAVFVTAFM 113 (273)
Q Consensus 94 ~~a~~~p~~v~~lil~~~~~ 113 (273)
..|++||+..++++.-+|..
T Consensus 131 ~~AQryP~dfDGIlAgaPA~ 150 (474)
T PF07519_consen 131 MAAQRYPEDFDGILAGAPAI 150 (474)
T ss_pred HHHHhChhhcCeEEeCCchH
Confidence 99999999999999988764
No 233
>PLN02761 lipase class 3 family protein
Probab=95.24 E-value=0.029 Score=45.82 Aligned_cols=36 Identities=19% Similarity=0.235 Sum_probs=25.2
Q ss_pred hchHHHHHHHHhCC-----CCCcEEEEEechhHHHHHHHHH
Q 024065 62 AYSEPLMEVLASLP-----AEEKVILVGHSLGGVTLALAAD 97 (273)
Q Consensus 62 ~~~~~l~~~l~~~~-----~~~~~~lvG~S~Gg~~a~~~a~ 97 (273)
++.+.|..+++... ..-++++.|||+||.+|...|.
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 34455566665541 1236999999999999998874
No 234
>PLN02847 triacylglycerol lipase
Probab=95.06 E-value=0.04 Score=45.78 Aligned_cols=29 Identities=41% Similarity=0.525 Sum_probs=21.9
Q ss_pred HHHHhCCCCCcEEEEEechhHHHHHHHHHH
Q 024065 69 EVLASLPAEEKVILVGHSLGGVTLALAADK 98 (273)
Q Consensus 69 ~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~ 98 (273)
..+... ..-+++++|||+||.+|..++..
T Consensus 243 kal~~~-PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 243 KALDEY-PDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHHC-CCCeEEEeccChHHHHHHHHHHH
Confidence 334444 55689999999999999887654
No 235
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=95.06 E-value=0.038 Score=43.40 Aligned_cols=37 Identities=27% Similarity=0.390 Sum_probs=30.9
Q ss_pred hhchHHHHHHHHhCCCCCcEEEEEechhHHHHHHHHHH
Q 024065 61 HAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADK 98 (273)
Q Consensus 61 ~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~ 98 (273)
..+.+++..+++.. ..-++.+-|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~-~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELY-PNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhc-CCcEEEEecCChHHHHHHHHHHH
Confidence 46677788888888 67899999999999999888754
No 236
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=94.72 E-value=0.17 Score=37.26 Aligned_cols=64 Identities=22% Similarity=0.144 Sum_probs=40.8
Q ss_pred CcEEEEeccCCC-CC-CC-CCcCCCcchhhchHHHHHHHHhC-CCCCcEEEEEechhHHHHHHHHHHC
Q 024065 36 GHRVTAVDLAAS-GI-NM-KRIEDVHTFHAYSEPLMEVLASL-PAEEKVILVGHSLGGVTLALAADKF 99 (273)
Q Consensus 36 g~~vi~~d~~G~-G~-s~-~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~lvG~S~Gg~~a~~~a~~~ 99 (273)
|+.+..+++|.. +- +. .......++.+=++.+.+.++.. ...++++++|+|+|+.++...+.+.
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHH
Confidence 566777777751 11 10 01112236666667777777663 2557899999999999998876653
No 237
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=94.52 E-value=0.089 Score=40.12 Aligned_cols=105 Identities=14% Similarity=0.107 Sum_probs=69.3
Q ss_pred CCceEEEEccCCCchhh----HHHHHH-----------HHhhCCcEEEEeccC-CCCCCCCCcC--CCcchhhchHHHHH
Q 024065 8 EEKHFVLVHGVNHGAWC----WYKLKA-----------RLVAGGHRVTAVDLA-ASGINMKRIE--DVHTFHAYSEPLME 69 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~----~~~~~~-----------~l~~~g~~vi~~d~~-G~G~s~~~~~--~~~~~~~~~~~l~~ 69 (273)
.+|..+.+.|.++.+.. |+.+-+ .|. . ..++.+|-| |.|.|--.-. ...+.++.+.|+.+
T Consensus 30 ~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk-~-adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~ 107 (414)
T KOG1283|consen 30 ERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLK-D-ADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVE 107 (414)
T ss_pred CCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhh-h-ccEEEecCCCcCceeeecCcccccccHHHHHHHHHH
Confidence 46777888887655433 333221 222 2 467888877 7887743332 33467888999999
Q ss_pred HHHhC------CCCCcEEEEEechhHHHHHHHHHHCCC---------ccceeEEeeccCC
Q 024065 70 VLASL------PAEEKVILVGHSLGGVTLALAADKFPH---------KISVAVFVTAFMP 114 (273)
Q Consensus 70 ~l~~~------~~~~~~~lvG~S~Gg~~a~~~a~~~p~---------~v~~lil~~~~~~ 114 (273)
+++.+ ....|++|++-|.||-+|..++...-+ ...+++|=++.+.
T Consensus 108 llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWIS 167 (414)
T KOG1283|consen 108 LLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWIS 167 (414)
T ss_pred HHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccC
Confidence 99876 245689999999999999888764322 3556776666543
No 238
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.86 E-value=0.18 Score=41.88 Aligned_cols=48 Identities=21% Similarity=0.375 Sum_probs=30.0
Q ss_pred HHHHHHHHhC--CCCCcEEEEEechhHHHHHHHHH-----HCCC------ccceeEEeecc
Q 024065 65 EPLMEVLASL--PAEEKVILVGHSLGGVTLALAAD-----KFPH------KISVAVFVTAF 112 (273)
Q Consensus 65 ~~l~~~l~~~--~~~~~~~lvG~S~Gg~~a~~~a~-----~~p~------~v~~lil~~~~ 112 (273)
..+.+.+.+. ++.++++.+||||||.++=.+.. ..|+ ...++|+++.+
T Consensus 511 ~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~P 571 (697)
T KOG2029|consen 511 NELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVP 571 (697)
T ss_pred HHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecC
Confidence 3344444443 34679999999999987755432 2332 35677777754
No 239
>PRK12467 peptide synthase; Provisional
Probab=92.63 E-value=1 Score=47.79 Aligned_cols=102 Identities=15% Similarity=0.051 Sum_probs=72.2
Q ss_pred CceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEechh
Q 024065 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLG 88 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~G 88 (273)
-+.+++.|....+...+..+...+... ..++.+..++.-..... ..+++.++....+.+.......+..+.|+|+|
T Consensus 3692 ~~~l~~~h~~~r~~~~~~~l~~~l~~~-~~~~~l~~~~~~~d~~~---~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~g 3767 (3956)
T PRK12467 3692 FPALFCRHEGLGTVFDYEPLAVILEGD-RHVLGLTCRHLLDDGWQ---DTSLQAMAVQYADYILWQQAKGPYGLLGWSLG 3767 (3956)
T ss_pred ccceeeechhhcchhhhHHHHHHhCCC-CcEEEEeccccccccCC---ccchHHHHHHHHHHHHHhccCCCeeeeeeecc
Confidence 456999999988888888888888654 78888877654322221 23677777777777766645568999999999
Q ss_pred HHHHHHHHHH---CCCccceeEEeeccCC
Q 024065 89 GVTLALAADK---FPHKISVAVFVTAFMP 114 (273)
Q Consensus 89 g~~a~~~a~~---~p~~v~~lil~~~~~~ 114 (273)
|.++..++.. ..+.+.-+.+++...+
T Consensus 3768 ~~~a~~~~~~l~~~g~~~~~~~~~~~~~~ 3796 (3956)
T PRK12467 3768 GTLARLVAELLEREGESEAFLGLFDNTLP 3796 (3956)
T ss_pred hHHHHHHHHHHHHcCCceeEEEEEecccc
Confidence 9999887653 4456666666654433
No 240
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=91.08 E-value=0.32 Score=36.60 Aligned_cols=35 Identities=26% Similarity=0.524 Sum_probs=25.9
Q ss_pred HHHHHHHhCCCCCcEEEEEechhHHHHHHHHHHCC
Q 024065 66 PLMEVLASLPAEEKVILVGHSLGGVTLALAADKFP 100 (273)
Q Consensus 66 ~l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p 100 (273)
||...+..+-...++.+-|||+||.+|..+..++.
T Consensus 264 dI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 264 DILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 34333334336778999999999999999887764
No 241
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=91.08 E-value=0.32 Score=36.60 Aligned_cols=35 Identities=26% Similarity=0.524 Sum_probs=25.9
Q ss_pred HHHHHHHhCCCCCcEEEEEechhHHHHHHHHHHCC
Q 024065 66 PLMEVLASLPAEEKVILVGHSLGGVTLALAADKFP 100 (273)
Q Consensus 66 ~l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p 100 (273)
||...+..+-...++.+-|||+||.+|..+..++.
T Consensus 264 dI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 264 DILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 34333334336778999999999999999887764
No 242
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.56 E-value=0.48 Score=38.80 Aligned_cols=41 Identities=24% Similarity=0.277 Sum_probs=31.5
Q ss_pred CCCCcEEEEEechhHHHHHHHHHHC-----CCccceeEEeeccCCC
Q 024065 75 PAEEKVILVGHSLGGVTLALAADKF-----PHKISVAVFVTAFMPD 115 (273)
Q Consensus 75 ~~~~~~~lvG~S~Gg~~a~~~a~~~-----p~~v~~lil~~~~~~~ 115 (273)
.+.+|+.|||+|+|+.+.+...... -+.|..+++++++.+.
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~ 489 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPT 489 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccC
Confidence 4889999999999999888654421 2458889999987653
No 243
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=88.14 E-value=0.96 Score=37.60 Aligned_cols=66 Identities=15% Similarity=0.014 Sum_probs=48.8
Q ss_pred cceEEEEeecCCCCCCHHHHHHHHHh----CC--------CceEEEEecCCcccccc--ChHhHHHHHHHHHhccccccc
Q 024065 206 SVKRVYLVCEEDIGLPKQFQHWMIQN----YP--------VNEVMEIKGGDHMAMLS--DPQKLCDCLSQISLNRHDITS 271 (273)
Q Consensus 206 ~~Pvl~i~g~~D~~~~~~~~~~~~~~----~~--------~~~~~~~~~~gH~~~~~--~~~~~~~~i~~fl~~~~~~~~ 271 (273)
--.+++.||..|.++|+.......++ .+ -.++..+||.+|..--. .+-.....|.+|+++-..-+.
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G~AP~~ 432 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENGKAPET 432 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCCCCCCe
Confidence 45789999999999988765544433 32 23899999999987654 345677899999998765443
No 244
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=87.10 E-value=3.7 Score=29.80 Aligned_cols=69 Identities=20% Similarity=0.171 Sum_probs=47.6
Q ss_pred HHhhCCc-EEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEech----hHHHHHHHHHHCC-Cccc
Q 024065 31 RLVAGGH-RVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSL----GGVTLALAADKFP-HKIS 104 (273)
Q Consensus 31 ~l~~~g~-~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~----Gg~~a~~~a~~~p-~~v~ 104 (273)
.+...|. +|+..|.++. ..++.+.+++.+.++++.. + ..++|+|+|. |..++-.+|.+.. ..+.
T Consensus 71 ~l~~~G~d~V~~~~~~~~--------~~~~~e~~a~al~~~i~~~-~-p~lVL~~~t~~~~~grdlaprlAarLga~lvs 140 (202)
T cd01714 71 EALAMGADRAILVSDRAF--------AGADTLATAKALAAAIKKI-G-VDLILTGKQSIDGDTGQVGPLLAELLGWPQIT 140 (202)
T ss_pred HHHHcCCCEEEEEecccc--------cCCChHHHHHHHHHHHHHh-C-CCEEEEcCCcccCCcCcHHHHHHHHhCCCccc
Confidence 3444455 6777765432 2357889999999999887 5 6899999998 7788888887654 2444
Q ss_pred eeEEe
Q 024065 105 VAVFV 109 (273)
Q Consensus 105 ~lil~ 109 (273)
.++-+
T Consensus 141 dv~~l 145 (202)
T cd01714 141 YVSKI 145 (202)
T ss_pred eEEEE
Confidence 44443
No 245
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=86.80 E-value=5.1 Score=33.88 Aligned_cols=96 Identities=17% Similarity=0.101 Sum_probs=49.0
Q ss_pred CceEEEEccCCCch---hh---H-HHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHh---C-CCC
Q 024065 9 EKHFVLVHGVNHGA---WC---W-YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLAS---L-PAE 77 (273)
Q Consensus 9 ~~~vv~lhG~~~~~---~~---~-~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~---~-~~~ 77 (273)
+-.|+=+||.|.-. .. | +.++..| |..|+.+|+-=-.+.+.+. ..++.--...-+|+. + ...
T Consensus 396 ~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL---~cPiiSVdYSLAPEaPFPR----aleEv~fAYcW~inn~allG~Tg 468 (880)
T KOG4388|consen 396 RSLIVHCHGGGFVAQSSKSHEPYLRSWAQAL---GCPIISVDYSLAPEAPFPR----ALEEVFFAYCWAINNCALLGSTG 468 (880)
T ss_pred ceEEEEecCCceeeeccccccHHHHHHHHHh---CCCeEEeeeccCCCCCCCc----HHHHHHHHHHHHhcCHHHhCccc
Confidence 44688889987322 22 2 3344443 6899999984322222111 122221111122221 1 134
Q ss_pred CcEEEEEechhHHHH----HHHHHHCCCccceeEEeec
Q 024065 78 EKVILVGHSLGGVTL----ALAADKFPHKISVAVFVTA 111 (273)
Q Consensus 78 ~~~~lvG~S~Gg~~a----~~~a~~~p~~v~~lil~~~ 111 (273)
++++++|-|.||.+. +++++..-..-+++++.-+
T Consensus 469 Eriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~ 506 (880)
T KOG4388|consen 469 ERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYP 506 (880)
T ss_pred ceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecC
Confidence 799999999999854 4444332222346665443
No 246
>PRK02399 hypothetical protein; Provisional
Probab=85.72 E-value=18 Score=29.42 Aligned_cols=99 Identities=18% Similarity=0.130 Sum_probs=62.0
Q ss_pred ceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcC----------------------CCcchhhchHHH
Q 024065 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIE----------------------DVHTFHAYSEPL 67 (273)
Q Consensus 10 ~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~----------------------~~~~~~~~~~~l 67 (273)
+.|+++-=+-.-...+..+.+.+.++|..|+.+|.-..|....+.+ ....++.+++-.
T Consensus 4 ~~I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga 83 (406)
T PRK02399 4 KRIYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGA 83 (406)
T ss_pred CEEEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHH
Confidence 4555553333334557777888888899999999844442211110 001223444455
Q ss_pred HHHHHhC---CCCCcEEEEEechhHHHHHHHHHHCCCccceeEE
Q 024065 68 MEVLASL---PAEEKVILVGHSLGGVTLALAADKFPHKISVAVF 108 (273)
Q Consensus 68 ~~~l~~~---~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil 108 (273)
..++..+ ....-++-+|-|.|..++.......|=-+-++++
T Consensus 84 ~~~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPiG~PKlmV 127 (406)
T PRK02399 84 AAFVRELYERGDVAGVIGLGGSGGTALATPAMRALPIGVPKLMV 127 (406)
T ss_pred HHHHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCCCCCeEEE
Confidence 5555543 2456788889999999999999888866666553
No 247
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=85.52 E-value=7.3 Score=31.08 Aligned_cols=86 Identities=20% Similarity=0.226 Sum_probs=60.2
Q ss_pred CceEEEEccCCCch-------hhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEE
Q 024065 9 EKHFVLVHGVNHGA-------WCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVI 81 (273)
Q Consensus 9 ~~~vv~lhG~~~~~-------~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 81 (273)
...||++||-..++ ++|..+++.+.++| -+-.+|..-.|.-+ .+++-+.-+..++... +-.
T Consensus 171 ~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~-lip~~D~AYQGF~~-------GleeDa~~lR~~a~~~----~~~ 238 (396)
T COG1448 171 EGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERG-LIPFFDIAYQGFAD-------GLEEDAYALRLFAEVG----PEL 238 (396)
T ss_pred CCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcC-Ceeeeehhhhhhcc-------chHHHHHHHHHHHHhC----CcE
Confidence 44699999876444 67999999999886 56777877665443 3455555566666554 228
Q ss_pred EEEechhHHHHHHHHHHCCCccceeEEeec
Q 024065 82 LVGHSLGGVTLALAADKFPHKISVAVFVTA 111 (273)
Q Consensus 82 lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~ 111 (273)
+|+.|+.=..+ .|.+||.++.+++.
T Consensus 239 lva~S~SKnfg-----LYgERVGa~~vva~ 263 (396)
T COG1448 239 LVASSFSKNFG-----LYGERVGALSVVAE 263 (396)
T ss_pred EEEehhhhhhh-----hhhhccceeEEEeC
Confidence 88888865544 57789999998875
No 248
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=85.12 E-value=19 Score=29.27 Aligned_cols=99 Identities=16% Similarity=0.155 Sum_probs=64.9
Q ss_pred ceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcC----------------------CCcchhhchHHH
Q 024065 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIE----------------------DVHTFHAYSEPL 67 (273)
Q Consensus 10 ~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~----------------------~~~~~~~~~~~l 67 (273)
++|+++-=+-.-...+..+.+.+.+.|..++.+|.-=.|.+..+.+ ....++.+++-.
T Consensus 2 ~tI~iigT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga 81 (403)
T PF06792_consen 2 KTIAIIGTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGA 81 (403)
T ss_pred CEEEEEEccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHH
Confidence 4556664444444568888889999999999999754444332211 001233444555
Q ss_pred HHHHHhC---CCCCcEEEEEechhHHHHHHHHHHCCCccceeEE
Q 024065 68 MEVLASL---PAEEKVILVGHSLGGVTLALAADKFPHKISVAVF 108 (273)
Q Consensus 68 ~~~l~~~---~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil 108 (273)
..++..+ ....-++-+|-|.|..++.......|=-+-+++.
T Consensus 82 ~~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmV 125 (403)
T PF06792_consen 82 ARFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPIGFPKLMV 125 (403)
T ss_pred HHHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCCCCCeEEE
Confidence 5566555 2356678889999999999999988866666653
No 249
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=83.77 E-value=5 Score=26.51 Aligned_cols=30 Identities=13% Similarity=0.135 Sum_probs=22.2
Q ss_pred CCCceEEEEccCCCchhhH--HHHHHHHhhCC
Q 024065 7 MEEKHFVLVHGVNHGAWCW--YKLKARLVAGG 36 (273)
Q Consensus 7 ~~~~~vv~lhG~~~~~~~~--~~~~~~l~~~g 36 (273)
..+|.|+-+||+.+++..| +-+++.|-+.|
T Consensus 50 p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G 81 (127)
T PF06309_consen 50 PRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSG 81 (127)
T ss_pred CCCCEEEEeecCCCCcHHHHHHHHHHHHHhcc
Confidence 3588888999999999887 45666655544
No 250
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=82.88 E-value=11 Score=28.89 Aligned_cols=89 Identities=15% Similarity=0.150 Sum_probs=49.7
Q ss_pred ceEEEEccCCCchhh------HHHHHHHH-hhCCcEEEEeccCCCCCC--------CCCcC----C--CcchhhchHHHH
Q 024065 10 KHFVLVHGVNHGAWC------WYKLKARL-VAGGHRVTAVDLAASGIN--------MKRIE----D--VHTFHAYSEPLM 68 (273)
Q Consensus 10 ~~vv~lhG~~~~~~~------~~~~~~~l-~~~g~~vi~~d~~G~G~s--------~~~~~----~--~~~~~~~~~~l~ 68 (273)
..|||+=|.+.+... -..+.+.+ ...+-..+++=.+|-|.. ..... . ...+++-+.+..
T Consensus 2 ~iv~~fDGT~n~~~~~~~~TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~ay 81 (277)
T PF09994_consen 2 RIVVFFDGTGNNPDNDPPPTNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDAY 81 (277)
T ss_pred cEEEEecCCCCCCCCCccccHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHHH
Confidence 467777777644432 13444555 222334555566777771 11110 0 123344443333
Q ss_pred HH-HHhCCCCCcEEEEEechhHHHHHHHHHH
Q 024065 69 EV-LASLPAEEKVILVGHSLGGVTLALAADK 98 (273)
Q Consensus 69 ~~-l~~~~~~~~~~lvG~S~Gg~~a~~~a~~ 98 (273)
.. .+.....+++.++|.|-|+..|-.++..
T Consensus 82 ~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 82 RFLSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred HHHHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 33 3444566789999999999999888854
No 251
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=82.85 E-value=10 Score=24.51 Aligned_cols=74 Identities=22% Similarity=0.270 Sum_probs=48.6
Q ss_pred eEEEEccCCCchhhHHHHHHHHhhC-CcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEechhH
Q 024065 11 HFVLVHGVNHGAWCWYKLKARLVAG-GHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGG 89 (273)
Q Consensus 11 ~vv~lhG~~~~~~~~~~~~~~l~~~-g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg 89 (273)
.||.-|| .-+......++.+... --.+.++++. ...+++++.+.+.+.++.+...+.+.++.==+||
T Consensus 2 iii~sHG--~~A~g~~~~~~~i~G~~~~~i~~~~~~----------~~~~~~~~~~~l~~~i~~~~~~~~vlil~Dl~gg 69 (116)
T PF03610_consen 2 IIIASHG--SLAEGLLESAEMILGEDQDNIEAVDLY----------PDESIEDFEEKLEEAIEELDEGDGVLILTDLGGG 69 (116)
T ss_dssp EEEEEET--THHHHHHHHHHHHHTSTCSSEEEEEET----------TTSCHHHHHHHHHHHHHHCCTTSEEEEEESSTTS
T ss_pred EEEEECc--HHHHHHHHHHHHHcCCCcccEEEEECc----------CCCCHHHHHHHHHHHHHhccCCCcEEEEeeCCCC
Confidence 4788899 4455566666666655 2467777764 2248899999999999888345666666655555
Q ss_pred HHHHHHH
Q 024065 90 VTLALAA 96 (273)
Q Consensus 90 ~~a~~~a 96 (273)
.....++
T Consensus 70 sp~n~a~ 76 (116)
T PF03610_consen 70 SPFNEAA 76 (116)
T ss_dssp HHHHHHH
T ss_pred ccchHHH
Confidence 5444333
No 252
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=81.17 E-value=16 Score=25.93 Aligned_cols=36 Identities=19% Similarity=0.265 Sum_probs=29.6
Q ss_pred CCceEEEEccCCCchhh--HHHHHHHHhhCCcEEEEec
Q 024065 8 EEKHFVLVHGVNHGAWC--WYKLKARLVAGGHRVTAVD 43 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~d 43 (273)
.++.+|++-|+.++... -..+.+.|.++|++++.+|
T Consensus 21 ~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LD 58 (197)
T COG0529 21 QKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLD 58 (197)
T ss_pred CCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEec
Confidence 36789999999877765 3567778889999999998
No 253
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=81.03 E-value=21 Score=29.23 Aligned_cols=71 Identities=13% Similarity=0.161 Sum_probs=42.7
Q ss_pred CceEEEEccCCCchhhH-----HHHHHHHhhCCcEEEEeccCCC---CCCCCCcCCCcchhhchHHHHHHHHh--CCCCC
Q 024065 9 EKHFVLVHGVNHGAWCW-----YKLKARLVAGGHRVTAVDLAAS---GINMKRIEDVHTFHAYSEPLMEVLAS--LPAEE 78 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~-----~~~~~~l~~~g~~vi~~d~~G~---G~s~~~~~~~~~~~~~~~~l~~~l~~--~~~~~ 78 (273)
+.|||+++.. +..+| ..-+..|.+.|+.|+-++ +|+ |..... ...++++.++.+...+.. + ..+
T Consensus 116 ~~pvvi~Pam--n~~m~~~p~~~~Nl~~L~~~G~~ii~P~-~g~la~~~~g~g--r~~~~~~I~~~~~~~~~~~~l-~gk 189 (399)
T PRK05579 116 TAPVLVAPAM--NTQMWENPATQRNLATLRSRGVEIIGPA-SGRLACGDVGPG--RMAEPEEIVAAAERALSPKDL-AGK 189 (399)
T ss_pred CCCEEEEeCC--ChhHcCCHHHHHHHHHHHHCCCEEECCC-CccccCCCcCCC--CCCCHHHHHHHHHHHhhhccc-CCC
Confidence 4577777744 34444 455667888898887554 343 333222 335778888877777643 4 445
Q ss_pred cEEEEEe
Q 024065 79 KVILVGH 85 (273)
Q Consensus 79 ~~~lvG~ 85 (273)
++.+-|-
T Consensus 190 ~vlITgG 196 (399)
T PRK05579 190 RVLITAG 196 (399)
T ss_pred EEEEeCC
Confidence 6666665
No 254
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=79.92 E-value=3.1 Score=32.43 Aligned_cols=63 Identities=16% Similarity=0.124 Sum_probs=40.1
Q ss_pred hhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEechhHHHHHHHHHHC
Q 024065 23 WCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKF 99 (273)
Q Consensus 23 ~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~ 99 (273)
..|+++++.|.... .-++++ |=| .-.-..--+.+.+++. +...-.++|.|+|+.++..++..+
T Consensus 2 ~d~~rl~r~l~~~~-~gLvL~--GGG----------~RG~ahiGvL~aLee~-gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 2 SDFSRLARVLTGNS-IALVLG--GGG----------ARGCAHIGVIKALEEA-GIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred ChHHHHHHHhcCCC-EEEEEC--ChH----------HHHHHHHHHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCC
Confidence 35777888887652 233333 200 1111222355666666 777788999999999999999764
No 255
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=79.82 E-value=2.3 Score=35.08 Aligned_cols=59 Identities=10% Similarity=0.056 Sum_probs=37.1
Q ss_pred cceEEEEeecCCCCCCHHHHHHHHHhCC-------CceEEEEecCCccccccChHhHHHHHHHHHhc
Q 024065 206 SVKRVYLVCEEDIGLPKQFQHWMIQNYP-------VNEVMEIKGGDHMAMLSDPQKLCDCLSQISLN 265 (273)
Q Consensus 206 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~-------~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 265 (273)
+.+++...|=.|..+|.-..+.-.+..+ ...+.+++ +||++.+++|+...+.+..|+..
T Consensus 425 ~Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~n~~~~r~y~-aGHMvp~d~P~~~~~~~~~~~~~ 490 (498)
T COG2939 425 KLKWLGASGYFDASTPFFWSRLTLEEMGGYKSYRNLTFLRIYE-AGHMVPYDRPESSLEMVNLWING 490 (498)
T ss_pred cceEeeecchhhhcCCCcccccchhhcccccccCCceEEEEec-CcceeecCChHHHHHHHHHHHhh
Confidence 3345555555555555443322222221 23455566 99999999999999999998865
No 256
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=78.64 E-value=26 Score=28.56 Aligned_cols=72 Identities=14% Similarity=0.110 Sum_probs=41.4
Q ss_pred ceEEEEccCCCch---hhHHHHHHHHhhCCcEEEEeccCCC---CCCCCCcCCCcchhhchHHHHHHHHh---CCCCCcE
Q 024065 10 KHFVLVHGVNHGA---WCWYKLKARLVAGGHRVTAVDLAAS---GINMKRIEDVHTFHAYSEPLMEVLAS---LPAEEKV 80 (273)
Q Consensus 10 ~~vv~lhG~~~~~---~~~~~~~~~l~~~g~~vi~~d~~G~---G~s~~~~~~~~~~~~~~~~l~~~l~~---~~~~~~~ 80 (273)
.++|+++-..... .....-+..|.+.|+.|+-+. +|+ |..... ...+++++++.+...+.. + ..+++
T Consensus 113 ~plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~P~-~g~~ac~~~g~g--~~~~~~~i~~~v~~~~~~~~~~-~~~~v 188 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAVQENIKRLKDDGYIFIEPD-SGLLACGDEGKG--RLAEPETIVKAAEREFSPKEDL-EGKRV 188 (390)
T ss_pred CCEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEECCC-CcccccccccCC--CCCCHHHHHHHHHHHHhhcccc-CCceE
Confidence 4677776532221 123556677888887766555 332 333222 235778888888877754 4 44566
Q ss_pred EEEEe
Q 024065 81 ILVGH 85 (273)
Q Consensus 81 ~lvG~ 85 (273)
.+-|-
T Consensus 189 lit~g 193 (390)
T TIGR00521 189 LITAG 193 (390)
T ss_pred EEecC
Confidence 66655
No 257
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=77.83 E-value=4.3 Score=28.52 Aligned_cols=33 Identities=24% Similarity=0.227 Sum_probs=25.2
Q ss_pred HHHHHHhCCCCCcEEEEEechhHHHHHHHHHHCC
Q 024065 67 LMEVLASLPAEEKVILVGHSLGGVTLALAADKFP 100 (273)
Q Consensus 67 l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p 100 (273)
+.+.+++. +...-.++|.|.|+.++..++...+
T Consensus 16 vl~aL~e~-gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 16 VAKALRER-GPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCC
Confidence 34444455 6678889999999999999997654
No 258
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=77.59 E-value=4.3 Score=29.10 Aligned_cols=33 Identities=27% Similarity=0.291 Sum_probs=24.4
Q ss_pred HHHHHHhCCCCCcEEEEEechhHHHHHHHHHHCC
Q 024065 67 LMEVLASLPAEEKVILVGHSLGGVTLALAADKFP 100 (273)
Q Consensus 67 l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p 100 (273)
+.+.+++. +...-.++|.|.||.+|..++..++
T Consensus 17 vl~~L~e~-~~~~d~i~GtSaGai~aa~~a~g~~ 49 (194)
T cd07207 17 ALKALEEA-GILKKRVAGTSAGAITAALLALGYS 49 (194)
T ss_pred HHHHHHHc-CCCcceEEEECHHHHHHHHHHcCCC
Confidence 33444445 6667889999999999999987543
No 259
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=77.38 E-value=18 Score=29.41 Aligned_cols=38 Identities=21% Similarity=0.181 Sum_probs=29.6
Q ss_pred EEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCC
Q 024065 12 FVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINM 51 (273)
Q Consensus 12 vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~ 51 (273)
|||+|+..- ..|+.+++.|.++|+.|.++-..+.+..+
T Consensus 2 il~~~~~~p--~~~~~la~~L~~~G~~v~~~~~~~~~~~~ 39 (396)
T cd03818 2 ILFVHQNFP--GQFRHLAPALAAQGHEVVFLTEPNAAPPP 39 (396)
T ss_pred EEEECCCCc--hhHHHHHHHHHHCCCEEEEEecCCCCCCC
Confidence 788987643 55899999999999999888776665433
No 260
>PRK10279 hypothetical protein; Provisional
Probab=76.95 E-value=4.2 Score=31.60 Aligned_cols=33 Identities=24% Similarity=0.214 Sum_probs=26.1
Q ss_pred HHHHHHhCCCCCcEEEEEechhHHHHHHHHHHCC
Q 024065 67 LMEVLASLPAEEKVILVGHSLGGVTLALAADKFP 100 (273)
Q Consensus 67 l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p 100 (273)
+.+.+++. +...-.++|.|+|+.++..||....
T Consensus 23 VL~aL~E~-gi~~d~i~GtS~GAlvga~yA~g~~ 55 (300)
T PRK10279 23 VINALKKV-GIEIDIVAGCSIGSLVGAAYACDRL 55 (300)
T ss_pred HHHHHHHc-CCCcCEEEEEcHHHHHHHHHHcCCh
Confidence 44555556 7788889999999999999997654
No 261
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=76.19 E-value=24 Score=25.53 Aligned_cols=74 Identities=19% Similarity=0.121 Sum_probs=44.1
Q ss_pred HHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEechhHHHHHHHHHHCC--Ccc
Q 024065 26 YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFP--HKI 103 (273)
Q Consensus 26 ~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p--~~v 103 (273)
....+.+.++++.++.+|-+|... .-.+..+.+..+++.. ....+++|=-+..+.-.+..+..+- -.+
T Consensus 73 ~~~l~~~~~~~~D~vlIDT~Gr~~---------~d~~~~~el~~~~~~~-~~~~~~LVlsa~~~~~~~~~~~~~~~~~~~ 142 (196)
T PF00448_consen 73 REALEKFRKKGYDLVLIDTAGRSP---------RDEELLEELKKLLEAL-NPDEVHLVLSATMGQEDLEQALAFYEAFGI 142 (196)
T ss_dssp HHHHHHHHHTTSSEEEEEE-SSSS---------THHHHHHHHHHHHHHH-SSSEEEEEEEGGGGGHHHHHHHHHHHHSST
T ss_pred HHHHHHHhhcCCCEEEEecCCcch---------hhHHHHHHHHHHhhhc-CCccceEEEecccChHHHHHHHHHhhcccC
Confidence 334455556679999999988532 2345566677777777 5566776655555554544433332 246
Q ss_pred ceeEEe
Q 024065 104 SVAVFV 109 (273)
Q Consensus 104 ~~lil~ 109 (273)
+++|+-
T Consensus 143 ~~lIlT 148 (196)
T PF00448_consen 143 DGLILT 148 (196)
T ss_dssp CEEEEE
T ss_pred ceEEEE
Confidence 777754
No 262
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=75.92 E-value=5 Score=30.63 Aligned_cols=32 Identities=19% Similarity=0.197 Sum_probs=25.5
Q ss_pred HHHHHHhCCCCCcEEEEEechhHHHHHHHHHHC
Q 024065 67 LMEVLASLPAEEKVILVGHSLGGVTLALAADKF 99 (273)
Q Consensus 67 l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~ 99 (273)
+.+.+++. +...-.++|.|+|+.++..+|...
T Consensus 28 VL~aLeE~-gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 28 ILQALEEA-GIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHc-CCCccEEEEECHHHHHHHHHHcCC
Confidence 45555666 777778899999999999999764
No 263
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=75.55 E-value=2.5 Score=33.20 Aligned_cols=29 Identities=34% Similarity=0.441 Sum_probs=23.1
Q ss_pred HHHHHHhCCCCCcEEEEEechhHHHHHHHH
Q 024065 67 LMEVLASLPAEEKVILVGHSLGGVTLALAA 96 (273)
Q Consensus 67 l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a 96 (273)
+.++++.. +..+-.++|||+|=..|+.++
T Consensus 74 l~~~l~~~-Gi~P~~v~GhSlGE~aA~~aa 102 (318)
T PF00698_consen 74 LARLLRSW-GIKPDAVIGHSLGEYAALVAA 102 (318)
T ss_dssp HHHHHHHT-THCESEEEESTTHHHHHHHHT
T ss_pred hhhhhccc-ccccceeeccchhhHHHHHHC
Confidence 44566777 889999999999988777655
No 264
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=75.48 E-value=20 Score=27.68 Aligned_cols=58 Identities=22% Similarity=0.161 Sum_probs=30.1
Q ss_pred HHHHHHHhhCCcE--EEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEechhHHHH
Q 024065 26 YKLKARLVAGGHR--VTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTL 92 (273)
Q Consensus 26 ~~~~~~l~~~g~~--vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg~~a 92 (273)
...++.+.+.|.. =|.+|. |.|.+.. .++-.+ +..-++.+...+-.+++|+|-=..+.
T Consensus 166 ~~~i~~a~~~GI~~~~IilDP-GiGF~k~-------~~~n~~-ll~~l~~l~~lg~Pilvg~SRKsfig 225 (282)
T PRK11613 166 IEQIARCEAAGIAKEKLLLDP-GFGFGKN-------LSHNYQ-LLARLAEFHHFNLPLLVGMSRKSMIG 225 (282)
T ss_pred HHHHHHHHHcCCChhhEEEeC-CCCcCCC-------HHHHHH-HHHHHHHHHhCCCCEEEEecccHHHH
Confidence 4445556667875 688885 7776532 221111 11122222123567899999554443
No 265
>COG3933 Transcriptional antiterminator [Transcription]
Probab=75.36 E-value=25 Score=28.92 Aligned_cols=73 Identities=21% Similarity=0.160 Sum_probs=53.1
Q ss_pred CceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEechh
Q 024065 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLG 88 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~G 88 (273)
-..||+.||... +......+..|... =-+.++|+| -..++.+..+.+.+-+++. +..+=.++=.+||
T Consensus 109 v~vIiiAHG~sT-ASSmaevanrLL~~-~~~~aiDMP----------Ldvsp~~vle~l~e~~k~~-~~~~GlllLVDMG 175 (470)
T COG3933 109 VKVIIIAHGYST-ASSMAEVANRLLGE-EIFIAIDMP----------LDVSPSDVLEKLKEYLKER-DYRSGLLLLVDMG 175 (470)
T ss_pred eeEEEEecCcch-HHHHHHHHHHHhhc-cceeeecCC----------CcCCHHHHHHHHHHHHHhc-CccCceEEEEecc
Confidence 457888899764 44455667777666 368999997 3358899999999999998 6666455556899
Q ss_pred HHHHHH
Q 024065 89 GVTLAL 94 (273)
Q Consensus 89 g~~a~~ 94 (273)
....+.
T Consensus 176 SL~~f~ 181 (470)
T COG3933 176 SLTSFG 181 (470)
T ss_pred hHHHHH
Confidence 876543
No 266
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=75.25 E-value=4.3 Score=31.41 Aligned_cols=29 Identities=31% Similarity=0.389 Sum_probs=22.8
Q ss_pred HHHHHhCCCCCcEEEEEechhHHHHHHHHH
Q 024065 68 MEVLASLPAEEKVILVGHSLGGVTLALAAD 97 (273)
Q Consensus 68 ~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~ 97 (273)
.++++.. +.++-.++|||+|-..|+.++.
T Consensus 73 ~~~l~~~-Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 73 ARLWRSW-GVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHc-CCcccEEEecCHHHHHHHHHhC
Confidence 3455667 8889999999999988876653
No 267
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=75.14 E-value=4.9 Score=31.40 Aligned_cols=33 Identities=21% Similarity=0.301 Sum_probs=26.8
Q ss_pred HHHHHHhCCCCCcEEEEEechhHHHHHHHHHHCC
Q 024065 67 LMEVLASLPAEEKVILVGHSLGGVTLALAADKFP 100 (273)
Q Consensus 67 l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p 100 (273)
+.+.++.. +..+-.+.|.|+|+.++..+|..+.
T Consensus 29 Vl~aL~e~-gi~~~~iaGtS~GAiva~l~A~g~~ 61 (306)
T COG1752 29 VLKALEEA-GIPIDVIAGTSAGAIVAALYAAGMD 61 (306)
T ss_pred HHHHHHHc-CCCccEEEecCHHHHHHHHHHcCCC
Confidence 45556666 7788999999999999999998654
No 268
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=75.10 E-value=6.1 Score=29.18 Aligned_cols=32 Identities=22% Similarity=0.279 Sum_probs=23.7
Q ss_pred HHHHHhCCCCCcEEEEEechhHHHHHHHHHHCC
Q 024065 68 MEVLASLPAEEKVILVGHSLGGVTLALAADKFP 100 (273)
Q Consensus 68 ~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p 100 (273)
.+.+++. +.+.-.++|.|.|+.+|..++...+
T Consensus 19 L~aL~e~-gi~~~~i~GtSaGAi~aa~~a~g~~ 50 (221)
T cd07210 19 LAALLEM-GLEPSAISGTSAGALVGGLFASGIS 50 (221)
T ss_pred HHHHHHc-CCCceEEEEeCHHHHHHHHHHcCCC
Confidence 3344444 5566789999999999999987543
No 269
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=74.52 E-value=4.8 Score=31.17 Aligned_cols=30 Identities=23% Similarity=0.265 Sum_probs=23.1
Q ss_pred HHHHHHhCCCCCcEEEEEechhHHHHHHHHH
Q 024065 67 LMEVLASLPAEEKVILVGHSLGGVTLALAAD 97 (273)
Q Consensus 67 l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~ 97 (273)
+.++++.. +.++..++|||+|=..|+.++.
T Consensus 66 l~~~l~~~-g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 66 AWRALLAL-LPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHHhc-CCCCcEEeecCHHHHHHHHHhC
Confidence 34555666 7789999999999988777653
No 270
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=74.08 E-value=8.5 Score=27.98 Aligned_cols=63 Identities=14% Similarity=0.215 Sum_probs=37.1
Q ss_pred CCceEEEEccCCCchh---hHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHh
Q 024065 8 EEKHFVLVHGVNHGAW---CWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLAS 73 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~---~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~ 73 (273)
..+|++++||.....- .-..+...|.+.|..+...-+++-|..-..+ ....++.+.+.+++++
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~---~~~~~~~~~~~~f~~~ 208 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNP---ENRRDWYERILDFFDK 208 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSH---HHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCc---hhHHHHHHHHHHHHHH
Confidence 4789999999865433 2356777888887766666666544321111 1233555566666654
No 271
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=73.61 E-value=20 Score=26.69 Aligned_cols=72 Identities=15% Similarity=0.178 Sum_probs=51.9
Q ss_pred CCceEEEEccCCCchhh--HHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEe
Q 024065 8 EEKHFVLVHGVNHGAWC--WYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGH 85 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~ 85 (273)
+.|.||++.|+.+++.. -..+...|-.+|++|.++.-|- .-+.--..+-.+-..++..+.+.++=-
T Consensus 29 ~~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~pt------------~eE~~~p~lwRfw~~lP~~G~i~IF~r 96 (230)
T TIGR03707 29 GARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKPS------------DRERTQWYFQRYVQHLPAAGEIVLFDR 96 (230)
T ss_pred CCCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCCC------------HHHHcChHHHHHHHhCCCCCeEEEEeC
Confidence 46899999999766544 6788888988999999988651 222223346677788877788888877
Q ss_pred chhHHH
Q 024065 86 SLGGVT 91 (273)
Q Consensus 86 S~Gg~~ 91 (273)
|+=+-+
T Consensus 97 SwY~~~ 102 (230)
T TIGR03707 97 SWYNRA 102 (230)
T ss_pred chhhhH
Confidence 775543
No 272
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=73.36 E-value=10 Score=26.26 Aligned_cols=36 Identities=22% Similarity=0.255 Sum_probs=27.1
Q ss_pred CceEEEEccCCCchhh--HHHHHHHHhhCCcEEEEecc
Q 024065 9 EKHFVLVHGVNHGAWC--WYKLKARLVAGGHRVTAVDL 44 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~d~ 44 (273)
++.+|++-|.+++... -..+.+.|.+.|+.++.+|-
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDg 38 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDG 38 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecC
Confidence 4689999999877765 35677788888999999973
No 273
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=72.03 E-value=16 Score=26.71 Aligned_cols=36 Identities=17% Similarity=0.221 Sum_probs=26.2
Q ss_pred CceEEEEccCCCchhh--H-HHHHHHHhhCCcEEEEecc
Q 024065 9 EKHFVLVHGVNHGAWC--W-YKLKARLVAGGHRVTAVDL 44 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~--~-~~~~~~l~~~g~~vi~~d~ 44 (273)
++.|.|++=.+.+... | ......|.+.|..+..+++
T Consensus 32 ~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l 70 (224)
T COG3340 32 RKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHL 70 (224)
T ss_pred CceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeec
Confidence 6789999877766554 3 4566678888888887775
No 274
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=71.75 E-value=16 Score=27.77 Aligned_cols=70 Identities=10% Similarity=0.100 Sum_probs=50.0
Q ss_pred CceEEEEccCCCchhh--HHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEec
Q 024065 9 EKHFVLVHGVNHGAWC--WYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHS 86 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S 86 (273)
.|.||++.|+.+++.. -+.+...|-.+|++|.++.-|. +-+..-..+-.+-.+++..+.+.|+=-|
T Consensus 55 ~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~Pt------------~eE~~~p~lWRfw~~lP~~G~i~IF~RS 122 (264)
T TIGR03709 55 RSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAPS------------AEELDHDFLWRIHKALPERGEIGIFNRS 122 (264)
T ss_pred CcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCCC------------HHHHcCchHHHHHHhCCCCCeEEEEcCc
Confidence 5899999999766543 6788899989999999997541 2222233466777788667788888767
Q ss_pred hhHH
Q 024065 87 LGGV 90 (273)
Q Consensus 87 ~Gg~ 90 (273)
+=+-
T Consensus 123 WY~~ 126 (264)
T TIGR03709 123 HYED 126 (264)
T ss_pred cccc
Confidence 6443
No 275
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=70.74 E-value=7.7 Score=27.34 Aligned_cols=31 Identities=29% Similarity=0.259 Sum_probs=23.4
Q ss_pred HHHHhCCCCCcEEEEEechhHHHHHHHHHHCC
Q 024065 69 EVLASLPAEEKVILVGHSLGGVTLALAADKFP 100 (273)
Q Consensus 69 ~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p 100 (273)
+.+++. +...-.++|.|.|+.+|..++...+
T Consensus 20 ~~L~e~-g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 20 RALEEE-GIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHHC-CCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 344445 5566778899999999999987654
No 276
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=69.85 E-value=8.3 Score=28.31 Aligned_cols=33 Identities=33% Similarity=0.432 Sum_probs=25.4
Q ss_pred HHHHHHhCCCCCcEEEEEechhHHHHHHHHHHCC
Q 024065 67 LMEVLASLPAEEKVILVGHSLGGVTLALAADKFP 100 (273)
Q Consensus 67 l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p 100 (273)
+.+.+++. +...-.++|.|.|+.+|..++...+
T Consensus 16 vl~aL~e~-g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 16 VLKALAEA-GIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCc
Confidence 34445555 6667788999999999999998765
No 277
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=69.27 E-value=6.8 Score=30.17 Aligned_cols=29 Identities=28% Similarity=0.256 Sum_probs=22.0
Q ss_pred HHHHHhCCC-CCcEEEEEechhHHHHHHHHH
Q 024065 68 MEVLASLPA-EEKVILVGHSLGGVTLALAAD 97 (273)
Q Consensus 68 ~~~l~~~~~-~~~~~lvG~S~Gg~~a~~~a~ 97 (273)
.+++... + ..+..++|||+|=..|+.++.
T Consensus 73 ~~~l~~~-g~i~p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 73 YLKLKEQ-GGLKPDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred HHHHHHc-CCCCCCEEeecCHHHHHHHHHhC
Confidence 3444555 5 889999999999988877664
No 278
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=68.23 E-value=15 Score=24.79 Aligned_cols=42 Identities=24% Similarity=0.166 Sum_probs=27.5
Q ss_pred eEEEEccCCCchhh--HHHHHHHHhhCCcEEEEeccCCCCCCCC
Q 024065 11 HFVLVHGVNHGAWC--WYKLKARLVAGGHRVTAVDLAASGINMK 52 (273)
Q Consensus 11 ~vv~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~d~~G~G~s~~ 52 (273)
|+|.+-|...++.. -+.++..|.++||+|.++=.-+||...-
T Consensus 1 pvv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~~ 44 (140)
T PF03205_consen 1 PVVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFEI 44 (140)
T ss_dssp -EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTTC
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCccc
Confidence 46777777655554 3689999999999998776666766543
No 279
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=67.92 E-value=5.3 Score=32.29 Aligned_cols=57 Identities=16% Similarity=0.176 Sum_probs=37.5
Q ss_pred cceEEEEeecCCCCCCHHHHHHHHHhCCCceEEEEecCCcccccc-----ChHhHHHHHHHHHh
Q 024065 206 SVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDHMAMLS-----DPQKLCDCLSQISL 264 (273)
Q Consensus 206 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~-----~~~~~~~~i~~fl~ 264 (273)
.-.+|+|+|++|+...... .+.+.-.+..+.+.||++|..-+. +.++....|.+|..
T Consensus 351 ~~rmlFVYG~nDPW~A~~f--~l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~WaG 412 (448)
T PF05576_consen 351 GPRMLFVYGENDPWSAEPF--RLGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWAG 412 (448)
T ss_pred CCeEEEEeCCCCCcccCcc--ccCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHcC
Confidence 4468999999998863221 112222466788889999986553 23556677777764
No 280
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=67.88 E-value=9.7 Score=29.11 Aligned_cols=52 Identities=27% Similarity=0.352 Sum_probs=33.7
Q ss_pred hchHHHHHHHHhCC--CCCcEEEEEechhHHHHHHH---HHHCCCccceeEEeeccC
Q 024065 62 AYSEPLMEVLASLP--AEEKVILVGHSLGGVTLALA---ADKFPHKISVAVFVTAFM 113 (273)
Q Consensus 62 ~~~~~l~~~l~~~~--~~~~~~lvG~S~Gg~~a~~~---a~~~p~~v~~lil~~~~~ 113 (273)
.+.+.+.+-+..++ .-.++++.|-|+|+.-+... +...-+++++.++.+++.
T Consensus 91 aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~ 147 (289)
T PF10081_consen 91 ALFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPF 147 (289)
T ss_pred HHHHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCC
Confidence 34444455555562 23579999999998855443 223345799999998763
No 281
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=67.64 E-value=12 Score=26.36 Aligned_cols=31 Identities=26% Similarity=0.298 Sum_probs=22.8
Q ss_pred HHHHHhCCCCCcEEEEEechhHHHHHHHHHHC
Q 024065 68 MEVLASLPAEEKVILVGHSLGGVTLALAADKF 99 (273)
Q Consensus 68 ~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~ 99 (273)
.+.++.. +...-.++|.|.|+.+|..++...
T Consensus 19 l~~L~~~-~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 19 LKALEEA-GIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHHc-CCCeeEEEEECHHHHHHHHHHcCC
Confidence 3344444 556678999999999999998654
No 282
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=66.55 E-value=4 Score=33.43 Aligned_cols=37 Identities=19% Similarity=0.258 Sum_probs=26.7
Q ss_pred HHHHHHhCCCCCcEEEEEechhHHHHHHHHHHCCCccc
Q 024065 67 LMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKIS 104 (273)
Q Consensus 67 l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~ 104 (273)
+...+... +..+-++.|.|.|+.+|..++...++.+.
T Consensus 91 VLkaL~E~-gl~p~vIsGTSaGAivAal~as~~~eel~ 127 (421)
T cd07230 91 VLKALFEA-NLLPRIISGSSAGSIVAAILCTHTDEEIP 127 (421)
T ss_pred HHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCHHHHH
Confidence 33444444 56677899999999999999986665543
No 283
>PRK14729 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Provisional
Probab=65.64 E-value=37 Score=26.52 Aligned_cols=75 Identities=13% Similarity=0.139 Sum_probs=44.4
Q ss_pred ceEEEEccCCCchhhHHHHHHHHhhCCcEEEEecc----CCC--CCCC----------------CCcCCCcchhhchHHH
Q 024065 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDL----AAS--GINM----------------KRIEDVHTFHAYSEPL 67 (273)
Q Consensus 10 ~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~----~G~--G~s~----------------~~~~~~~~~~~~~~~l 67 (273)
++||++-|-.+++..- ++-.|++++-.||..|- +|. |... .++...++..++.++.
T Consensus 4 ~~ii~I~GpTasGKS~--LAl~LA~~~~eIIsaDS~QvYr~ldIgTaKpt~eE~~~i~Hhlid~~~p~e~~sv~~f~~~a 81 (300)
T PRK14729 4 NKIVFIFGPTAVGKSN--ILFHFPKGKAEIINVDSIQVYKEFDIASCKPSKELRKHIKHHLVDFLEPIKEYNLGIFYKEA 81 (300)
T ss_pred CcEEEEECCCccCHHH--HHHHHHHhCCcEEeccHHHHHCCCceecCCCCHHHHcCCCeeeeeccCCCCceeHHHHHHHH
Confidence 4577777776666542 33334444448898883 332 1111 1233568899999999
Q ss_pred HHHHHhC-CCCCcEEEEEec
Q 024065 68 MEVLASL-PAEEKVILVGHS 86 (273)
Q Consensus 68 ~~~l~~~-~~~~~~~lvG~S 86 (273)
...++.+ ...+..++||-|
T Consensus 82 ~~~i~~i~~~gk~PilvGGT 101 (300)
T PRK14729 82 LKIIKELRQQKKIPIFVGGS 101 (300)
T ss_pred HHHHHHHHHCCCCEEEEeCc
Confidence 9999876 233455677643
No 284
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=65.64 E-value=18 Score=24.02 Aligned_cols=34 Identities=29% Similarity=0.409 Sum_probs=22.1
Q ss_pred CceEEEEccCC-------------CchhhHH-----------HHHHHHhhCCcEEEEe
Q 024065 9 EKHFVLVHGVN-------------HGAWCWY-----------KLKARLVAGGHRVTAV 42 (273)
Q Consensus 9 ~~~vv~lhG~~-------------~~~~~~~-----------~~~~~l~~~g~~vi~~ 42 (273)
-..++|+||-. ++.+.|. ..+..|.+.|++|+++
T Consensus 57 y~~viFvHGCFWh~H~c~~a~vPksnt~fWleKi~kNveRD~r~~~~L~~~GwrvlvV 114 (150)
T COG3727 57 YRCVIFVHGCFWHGHHCYLAKVPKSNTEFWLEKIGKNVERDERDIKRLQQLGWRVLVV 114 (150)
T ss_pred ceEEEEEeeeeccCCccccccCCCcchHHHHHHHhhhhhhhHHHHHHHHHcCCeEEEE
Confidence 34789999953 3334452 2455677889998765
No 285
>PRK14974 cell division protein FtsY; Provisional
Probab=65.49 E-value=65 Score=25.74 Aligned_cols=66 Identities=24% Similarity=0.268 Sum_probs=39.7
Q ss_pred hCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEechhHHHHHHHHHHCC--CccceeEEe
Q 024065 34 AGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFP--HKISVAVFV 109 (273)
Q Consensus 34 ~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p--~~v~~lil~ 109 (273)
..|+.++.+|-+|... +-..+.+.+..+.+.. ....+++|.-+.-|.=+...+..+. -.+.++|+.
T Consensus 220 ~~~~DvVLIDTaGr~~---------~~~~lm~eL~~i~~~~-~pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIlT 287 (336)
T PRK14974 220 ARGIDVVLIDTAGRMH---------TDANLMDELKKIVRVT-KPDLVIFVGDALAGNDAVEQAREFNEAVGIDGVILT 287 (336)
T ss_pred hCCCCEEEEECCCccC---------CcHHHHHHHHHHHHhh-CCceEEEeeccccchhHHHHHHHHHhcCCCCEEEEe
Confidence 4568889999876432 2244455566666655 4556667766666665565555443 246666654
No 286
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=64.51 E-value=23 Score=25.85 Aligned_cols=56 Identities=20% Similarity=0.149 Sum_probs=34.2
Q ss_pred CceEEEEccCCCchhh---HHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHH
Q 024065 9 EKHFVLVHGVNHGAWC---WYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLA 72 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~---~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~ 72 (273)
+.+|+++||-....-. -+...+.|.+.|.+|-.-.++|-|.+ ...+..+++.++++
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~--------i~~~~~~~~~~~l~ 213 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHE--------ISPEELRDLREFLE 213 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS----------HHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCC--------CCHHHHHHHHHHHh
Confidence 5689999998765533 35677788888887877777765544 22444555666554
No 287
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=64.33 E-value=38 Score=22.18 Aligned_cols=71 Identities=20% Similarity=0.226 Sum_probs=46.0
Q ss_pred eEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEechhHH
Q 024065 11 HFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGV 90 (273)
Q Consensus 11 ~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg~ 90 (273)
.||.-|| .-+......++.+....-.+.++++. ...+++++.+.+.++++.....+.++++.==+||.
T Consensus 3 ili~sHG--~~A~gi~~~~~~i~G~~~~i~~~~~~----------~~~~~~~~~~~i~~~i~~~~~~~~viil~Dl~GGS 70 (122)
T cd00006 3 IIIATHG--GFASGLLNSAEMILGEQENVEAIDFP----------PGESPDDLLEKIKAALAELDSGEGVLILTDLFGGS 70 (122)
T ss_pred EEEEcCH--HHHHHHHHHHHHhcCCCCCeEEEEeC----------CCCCHHHHHHHHHHHHHHhCCCCcEEEEEeCCCCC
Confidence 5778899 44555666666665443467788764 22478888889999998883335555555444666
Q ss_pred HHH
Q 024065 91 TLA 93 (273)
Q Consensus 91 ~a~ 93 (273)
...
T Consensus 71 p~n 73 (122)
T cd00006 71 PNN 73 (122)
T ss_pred HHH
Confidence 543
No 288
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=63.91 E-value=51 Score=23.97 Aligned_cols=33 Identities=24% Similarity=0.228 Sum_probs=23.4
Q ss_pred eEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccC
Q 024065 11 HFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLA 45 (273)
Q Consensus 11 ~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~ 45 (273)
.+..+-|.+ +..=+.+...|+++|++|++.|+.
T Consensus 15 k~~~vtGg~--sGIGrAia~~la~~Garv~v~dl~ 47 (256)
T KOG1200|consen 15 KVAAVTGGS--SGIGRAIAQLLAKKGARVAVADLD 47 (256)
T ss_pred ceeEEecCC--chHHHHHHHHHHhcCcEEEEeecc
Confidence 445555543 334467888999999999999865
No 289
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=63.55 E-value=46 Score=27.48 Aligned_cols=49 Identities=16% Similarity=0.258 Sum_probs=38.0
Q ss_pred hhchHHHHHHHHhCCCCCcEEEEEechhHHHHHHHHHHCCCc--cceeEEee
Q 024065 61 HAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHK--ISVAVFVT 110 (273)
Q Consensus 61 ~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~--v~~lil~~ 110 (273)
+++.+.+.++-+.+ ....+.+|--++=|.-|...|..+-+. +.++|+.=
T Consensus 198 e~Lm~El~~Ik~~~-~P~E~llVvDam~GQdA~~~A~aF~e~l~itGvIlTK 248 (451)
T COG0541 198 EELMDELKEIKEVI-NPDETLLVVDAMIGQDAVNTAKAFNEALGITGVILTK 248 (451)
T ss_pred HHHHHHHHHHHhhc-CCCeEEEEEecccchHHHHHHHHHhhhcCCceEEEEc
Confidence 45666677777777 778899999999999999999888764 67777643
No 290
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=63.03 E-value=88 Score=26.01 Aligned_cols=71 Identities=13% Similarity=0.206 Sum_probs=44.3
Q ss_pred HHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEechhHHHHHHHHHHCCC--cccee
Q 024065 29 KARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPH--KISVA 106 (273)
Q Consensus 29 ~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~--~v~~l 106 (273)
...+.+.+|.++.+|-+|.-. .-+.+.+.+..+.+.. ....+++|--++-|.-+...+..+-+ .+.++
T Consensus 175 l~~~~~~~~DvViIDTaGr~~---------~d~~lm~El~~i~~~~-~p~e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~ 244 (429)
T TIGR01425 175 VEKFKKENFDIIIVDTSGRHK---------QEDSLFEEMLQVAEAI-QPDNIIFVMDGSIGQAAEAQAKAFKDSVDVGSV 244 (429)
T ss_pred HHHHHhCCCCEEEEECCCCCc---------chHHHHHHHHHHhhhc-CCcEEEEEeccccChhHHHHHHHHHhccCCcEE
Confidence 334445579999999997421 2234555666666666 55677787777767666666665533 35666
Q ss_pred EEe
Q 024065 107 VFV 109 (273)
Q Consensus 107 il~ 109 (273)
|+.
T Consensus 245 IlT 247 (429)
T TIGR01425 245 IIT 247 (429)
T ss_pred EEE
Confidence 653
No 291
>PF08433 KTI12: Chromatin associated protein KTI12 ; InterPro: IPR013641 This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II []. The Elongator complex has histone acetyltransferase activity. ; PDB: 3ADB_B 3ADC_B 3A4M_B 3A4N_B 3AM1_A 3A4L_B 3ADD_A.
Probab=62.98 E-value=18 Score=27.79 Aligned_cols=38 Identities=18% Similarity=0.240 Sum_probs=23.6
Q ss_pred eEEEEccCCCchhhH--HHHHHHHhhCCcEEEEeccCCCC
Q 024065 11 HFVLVHGVNHGAWCW--YKLKARLVAGGHRVTAVDLAASG 48 (273)
Q Consensus 11 ~vv~lhG~~~~~~~~--~~~~~~l~~~g~~vi~~d~~G~G 48 (273)
|+|++-|+++++..- ..+...|.+.++.|+.++--..+
T Consensus 2 pLiil~G~P~SGKTt~a~~L~~~~~~~~~~v~~i~~~~~~ 41 (270)
T PF08433_consen 2 PLIILCGLPCSGKTTRAKELKKYLEEKGKEVVIISDDSLG 41 (270)
T ss_dssp -EEEEE--TTSSHHHHHHHHHHHHHHTT--EEEE-THHHH
T ss_pred EEEEEEcCCCCcHHHHHHHHHHHHHhcCCEEEEEcccccc
Confidence 688899998888763 56777888888888888744333
No 292
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=62.95 E-value=35 Score=26.24 Aligned_cols=95 Identities=16% Similarity=0.031 Sum_probs=46.6
Q ss_pred EccCCCchhhHHHHHHHHhhCCcEEEEe------ccCCCCCCCCCcCCCcchhhchHHHHHHHHhC--CCCCcEEEEEec
Q 024065 15 VHGVNHGAWCWYKLKARLVAGGHRVTAV------DLAASGINMKRIEDVHTFHAYSEPLMEVLASL--PAEEKVILVGHS 86 (273)
Q Consensus 15 lhG~~~~~~~~~~~~~~l~~~g~~vi~~------d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~lvG~S 86 (273)
+||.-+++. -...|...|++|.++ ..+|||....... ..+..+++.+-++.. ...-..++-|+=
T Consensus 11 v~G~vGn~A----A~f~lq~~G~~V~~vpTV~fSnHtgyg~~~g~v~----~~e~l~~~l~~l~~~~~~~~~davltGYl 82 (281)
T COG2240 11 VYGSVGNSA----AIFPLQRLGLDVWAVPTVQFSNHTGYGKWTGIVM----PPEQLADLLNGLEAIDKLGECDAVLTGYL 82 (281)
T ss_pred eecccccHh----HHHHHHHcCCceeeeceEEecCCCCCCCCCCcCC----CHHHHHHHHHHHHhcccccccCEEEEccC
Confidence 455544443 233455567776654 6889998654432 233333333333321 133356666652
Q ss_pred hhH----HHHHHHHHHCCCccceeEEeeccCCCCC
Q 024065 87 LGG----VTLALAADKFPHKISVAVFVTAFMPDTT 117 (273)
Q Consensus 87 ~Gg----~~a~~~a~~~p~~v~~lil~~~~~~~~~ 117 (273)
-.+ .++-.+.+-.-..-+.+++++|.+...+
T Consensus 83 gs~~qv~~i~~~v~~vk~~~P~~~~l~DPVMGD~g 117 (281)
T COG2240 83 GSAEQVRAIAGIVKAVKEANPNALYLCDPVMGDPG 117 (281)
T ss_pred CCHHHHHHHHHHHHHHhccCCCeEEEeCCcccCCC
Confidence 222 2222222221223346789999876655
No 293
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=62.92 E-value=75 Score=25.15 Aligned_cols=89 Identities=11% Similarity=0.012 Sum_probs=51.8
Q ss_pred CceEEEEccCC----Cch-hhHHHHHHHHhh-CCcEEEEeccCCCCCCCCCcC------------C---CcchhhchHHH
Q 024065 9 EKHFVLVHGVN----HGA-WCWYKLKARLVA-GGHRVTAVDLAASGINMKRIE------------D---VHTFHAYSEPL 67 (273)
Q Consensus 9 ~~~vv~lhG~~----~~~-~~~~~~~~~l~~-~g~~vi~~d~~G~G~s~~~~~------------~---~~~~~~~~~~l 67 (273)
+..|+|+-|.. ... ..--.+...|.. .+.+++++=.+|.|.-..... . ...+..-++..
T Consensus 31 k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~A 110 (423)
T COG3673 31 KRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIREA 110 (423)
T ss_pred ceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHHH
Confidence 56777877742 111 112344555655 578888888888886532110 0 11223333333
Q ss_pred HHH-HHhCCCCCcEEEEEechhHHHHHHHHH
Q 024065 68 MEV-LASLPAEEKVILVGHSLGGVTLALAAD 97 (273)
Q Consensus 68 ~~~-l~~~~~~~~~~lvG~S~Gg~~a~~~a~ 97 (273)
..+ +.+....++++++|+|-|+.+|--+|.
T Consensus 111 YrFL~~~yepGD~Iy~FGFSRGAf~aRVlag 141 (423)
T COG3673 111 YRFLIFNYEPGDEIYAFGFSRGAFSARVLAG 141 (423)
T ss_pred HHHHHHhcCCCCeEEEeeccchhHHHHHHHH
Confidence 333 333346689999999999998877764
No 294
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=62.81 E-value=37 Score=25.42 Aligned_cols=38 Identities=16% Similarity=0.072 Sum_probs=26.9
Q ss_pred CCceEEEEccCCCc--hhhH-HHHHHHHhhCCcEEEEeccC
Q 024065 8 EEKHFVLVHGVNHG--AWCW-YKLKARLVAGGHRVTAVDLA 45 (273)
Q Consensus 8 ~~~~vv~lhG~~~~--~~~~-~~~~~~l~~~g~~vi~~d~~ 45 (273)
.++.|+|++=.... ...| +.+.+.+.+.|+.|..++..
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~ 70 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRV 70 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccc
Confidence 36789999877633 3333 45666777889998888765
No 295
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=62.80 E-value=14 Score=21.93 Aligned_cols=26 Identities=27% Similarity=0.300 Sum_probs=19.9
Q ss_pred CCCCcEEEEEechhHHHHHHHHHHCC
Q 024065 75 PAEEKVILVGHSLGGVTLALAADKFP 100 (273)
Q Consensus 75 ~~~~~~~lvG~S~Gg~~a~~~a~~~p 100 (273)
.+.+++.++|-|.|=.+|.+.+..+.
T Consensus 37 ~GpK~VLViGaStGyGLAsRIa~aFg 62 (78)
T PF12242_consen 37 NGPKKVLVIGASTGYGLASRIAAAFG 62 (78)
T ss_dssp TS-SEEEEES-SSHHHHHHHHHHHHC
T ss_pred CCCceEEEEecCCcccHHHHHHHHhc
Confidence 36688999999999999988877764
No 296
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=62.66 E-value=9.3 Score=28.37 Aligned_cols=71 Identities=20% Similarity=0.133 Sum_probs=44.1
Q ss_pred CCceEEEEccCCCchhh--HHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhch-HHHHHHHHhCCCCCcEEEEE
Q 024065 8 EEKHFVLVHGVNHGAWC--WYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYS-EPLMEVLASLPAEEKVILVG 84 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~-~~l~~~l~~~~~~~~~~lvG 84 (273)
+.|+||++.|+.+++.. -..+...|-.+|++|.++.-| +-++.. ..+-.+-.+++..+.+.++=
T Consensus 29 ~~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~p-------------t~eE~~~p~lwRfw~~lP~~G~I~if~ 95 (228)
T PF03976_consen 29 GIPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKP-------------TDEELRRPFLWRFWRALPARGQIGIFD 95 (228)
T ss_dssp HHEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS---------------HHHHTS-TTHHHHTTS--TT-EEEEE
T ss_pred CCcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCC-------------ChhHcCCCcHHHHHHhCCCCCEEEEEe
Confidence 35789999999777654 467777787889999999865 222222 23567777786777888887
Q ss_pred echhHHH
Q 024065 85 HSLGGVT 91 (273)
Q Consensus 85 ~S~Gg~~ 91 (273)
-|+=.-+
T Consensus 96 rSWY~~~ 102 (228)
T PF03976_consen 96 RSWYEDV 102 (228)
T ss_dssp S-GGGGG
T ss_pred cchhhHH
Confidence 7764443
No 297
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=62.57 E-value=4.2 Score=28.14 Aligned_cols=48 Identities=19% Similarity=0.167 Sum_probs=25.6
Q ss_pred ccCCCCCCCCC--cCCCcchhhchHHH----HHHHHhC---CCCCcEEEEEechhHH
Q 024065 43 DLAASGINMKR--IEDVHTFHAYSEPL----MEVLASL---PAEEKVILVGHSLGGV 90 (273)
Q Consensus 43 d~~G~G~s~~~--~~~~~~~~~~~~~l----~~~l~~~---~~~~~~~lvG~S~Gg~ 90 (273)
-+-|||..... .-..++.++++.-+ ..+-+.. ...+++.|+|.|++..
T Consensus 60 ~lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 60 QLVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 34578877221 11345777777777 3333332 1356899999999887
No 298
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=62.34 E-value=31 Score=24.59 Aligned_cols=59 Identities=8% Similarity=0.022 Sum_probs=36.0
Q ss_pred CceEEEEccCCCchhhH-----HHHHHHHhhCCcEEEEeccCCC---CCCCCCcCCCcchhhchHHHHHHHH
Q 024065 9 EKHFVLVHGVNHGAWCW-----YKLKARLVAGGHRVTAVDLAAS---GINMKRIEDVHTFHAYSEPLMEVLA 72 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~-----~~~~~~l~~~g~~vi~~d~~G~---G~s~~~~~~~~~~~~~~~~l~~~l~ 72 (273)
+.+||+++- .+..+| ..-...|.+.|+.|+-+. +|+ |..... ...+++++++.+...+.
T Consensus 113 ~~pvvi~Pa--mn~~m~~~p~~~~Nl~~L~~~G~~vi~p~-~g~la~~~~g~g--~~~~~~~i~~~v~~~~~ 179 (182)
T PRK07313 113 TTPKLIAPA--MNTKMYENPATQRNLKTLKEDGVQEIEPK-EGLLACGDEGYG--ALADIETILETIENTLK 179 (182)
T ss_pred CCCEEEEEC--CCHHHhcCHHHHHHHHHHHHCCCEEECCC-CCccccCCccCC--CCCCHHHHHHHHHHHhc
Confidence 557777764 334444 456678888898877776 454 444322 22477777777766554
No 299
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=62.21 E-value=59 Score=27.29 Aligned_cols=86 Identities=17% Similarity=0.169 Sum_probs=53.9
Q ss_pred EEccCCCchhhH-HHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEechhHHHH
Q 024065 14 LVHGVNHGAWCW-YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTL 92 (273)
Q Consensus 14 ~lhG~~~~~~~~-~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg~~a 92 (273)
|=-|++.+...- ..-+++-..+||.|+.+|-.|.-. +-+.+...+..+++.- ..+.++.||--+=|.=+
T Consensus 443 fekGYgkd~a~vak~AI~~a~~~gfDVvLiDTAGR~~---------~~~~lm~~l~k~~~~~-~pd~i~~vgealvg~ds 512 (587)
T KOG0781|consen 443 FEKGYGKDAAGVAKEAIQEARNQGFDVVLIDTAGRMH---------NNAPLMTSLAKLIKVN-KPDLILFVGEALVGNDS 512 (587)
T ss_pred HhhhcCCChHHHHHHHHHHHHhcCCCEEEEecccccc---------CChhHHHHHHHHHhcC-CCceEEEehhhhhCcHH
Confidence 345666554443 334455556799999999877322 3344555677777776 77889999988877755
Q ss_pred HHHHHHC---------CCccceeEEe
Q 024065 93 ALAADKF---------PHKISVAVFV 109 (273)
Q Consensus 93 ~~~a~~~---------p~~v~~lil~ 109 (273)
+.-+..+ |..|+++++.
T Consensus 513 v~q~~~fn~al~~~~~~r~id~~~lt 538 (587)
T KOG0781|consen 513 VDQLKKFNRALADHSTPRLIDGILLT 538 (587)
T ss_pred HHHHHHHHHHHhcCCCccccceEEEE
Confidence 5443322 3356666654
No 300
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=62.11 E-value=5.5 Score=32.53 Aligned_cols=39 Identities=15% Similarity=0.190 Sum_probs=28.4
Q ss_pred HHHHHHhCCCCCcEEEEEechhHHHHHHHHHHCCCcccee
Q 024065 67 LMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVA 106 (273)
Q Consensus 67 l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~l 106 (273)
+...+... +..+-+++|.|.|+.+|..++...++.+..+
T Consensus 85 VlkaL~e~-gllp~iI~GtSAGAivaalla~~t~~el~~~ 123 (407)
T cd07232 85 VVKALLDA-DLLPNVISGTSGGSLVAALLCTRTDEELKQL 123 (407)
T ss_pred HHHHHHhC-CCCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 34444444 6677789999999999999998666555444
No 301
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=62.05 E-value=15 Score=28.03 Aligned_cols=34 Identities=12% Similarity=0.130 Sum_probs=23.9
Q ss_pred HHHHHhCCCCC-cEEEEEechhHHHHHHHHHHCCCc
Q 024065 68 MEVLASLPAEE-KVILVGHSLGGVTLALAADKFPHK 102 (273)
Q Consensus 68 ~~~l~~~~~~~-~~~lvG~S~Gg~~a~~~a~~~p~~ 102 (273)
.+.+.+. +.. .-.++|.|.|+.++..++...+.+
T Consensus 17 l~al~e~-~~~~fd~i~GtSaGAi~a~~~~~g~~~~ 51 (266)
T cd07208 17 LDAFLEA-GIRPFDLVIGVSAGALNAASYLSGQRGR 51 (266)
T ss_pred HHHHHHc-CCCCCCEEEEECHHHHhHHHHHhCCcch
Confidence 3334444 444 557889999999999998876543
No 302
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=61.80 E-value=80 Score=25.11 Aligned_cols=77 Identities=16% Similarity=0.159 Sum_probs=47.6
Q ss_pred EEEccCCCchhhHHHHHHHHhhCC--cEEEEeccCCCCCCC--C------------C-cCCCcchhhchHHHHHHHHhCC
Q 024065 13 VLVHGVNHGAWCWYKLKARLVAGG--HRVTAVDLAASGINM--K------------R-IEDVHTFHAYSEPLMEVLASLP 75 (273)
Q Consensus 13 v~lhG~~~~~~~~~~~~~~l~~~g--~~vi~~d~~G~G~s~--~------------~-~~~~~~~~~~~~~l~~~l~~~~ 75 (273)
|+++|+|+-......+++.+.... ..|++++ |+-.+- + . .....+..+.++.+...++...
T Consensus 57 lL~YG~GSKr~lL~~Fa~~~l~~~~~~~~vvvn--Gy~p~~~~k~il~~I~~~l~~~~~~~~~~~~~~~~~i~~~l~~~~ 134 (326)
T PF04084_consen 57 LLFYGYGSKRKLLNDFAEKYLSDWGDGPVVVVN--GYFPSLSIKDILNTIEEALLPEPSKKPKSPSEQLDFIISYLESRP 134 (326)
T ss_pred EEEEecChHHHHHHHHHHHHhhccCCCcEEEEE--ccCCCCcHHHHHHHHHHHHhhhcccccCCHHHHHHHHHHHHhccC
Confidence 788999888777888887766552 5677776 222111 0 0 1111245555666666666552
Q ss_pred CCCcEEEEEechhHHH
Q 024065 76 AEEKVILVGHSLGGVT 91 (273)
Q Consensus 76 ~~~~~~lvG~S~Gg~~ 91 (273)
...+++|+=|+.=|..
T Consensus 135 ~~~~l~lvIHnIDg~~ 150 (326)
T PF04084_consen 135 SPPPLYLVIHNIDGPS 150 (326)
T ss_pred CCCceEEEEECCCChh
Confidence 2678999999987764
No 303
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=61.53 E-value=8.1 Score=29.43 Aligned_cols=22 Identities=41% Similarity=0.706 Sum_probs=16.1
Q ss_pred HHHHhCCCCCcEEEEEechhHH
Q 024065 69 EVLASLPAEEKVILVGHSLGGV 90 (273)
Q Consensus 69 ~~l~~~~~~~~~~lvG~S~Gg~ 90 (273)
.+++.+.....++++|||+|..
T Consensus 226 ~~~~~l~~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 226 SFFESLSDIDEIIIYGHSLGEV 247 (270)
T ss_pred HHHhhhcCCCEEEEEeCCCchh
Confidence 3444444568899999999975
No 304
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=61.39 E-value=19 Score=25.27 Aligned_cols=35 Identities=14% Similarity=0.105 Sum_probs=27.8
Q ss_pred CCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEe
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAV 42 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~ 42 (273)
..+.|+++-|-|.+...=-..++.|..+|++|.++
T Consensus 24 ~~~~v~il~G~GnNGgDgl~~AR~L~~~G~~V~v~ 58 (169)
T PF03853_consen 24 KGPRVLILCGPGNNGGDGLVAARHLANRGYNVTVY 58 (169)
T ss_dssp TT-EEEEEE-SSHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCeEEEEECCCCChHHHHHHHHHHHHCCCeEEEE
Confidence 46788999999888887778889999999998883
No 305
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=60.70 E-value=6.7 Score=31.73 Aligned_cols=39 Identities=15% Similarity=0.112 Sum_probs=27.8
Q ss_pred HHHHHhCCCCCcEEEEEechhHHHHHHHHHHCCCccceeE
Q 024065 68 MEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAV 107 (273)
Q Consensus 68 ~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~li 107 (273)
...+... +..+-++.|.|.|+.+|..+|...++.+..++
T Consensus 102 ~kaL~e~-gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~~l 140 (391)
T cd07229 102 VKALWLR-GLLPRIITGTATGALIAALVGVHTDEELLRFL 140 (391)
T ss_pred HHHHHHc-CCCCceEEEecHHHHHHHHHHcCCHHHHHHHH
Confidence 3344444 66778899999999999999986555544443
No 306
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=59.95 E-value=17 Score=25.35 Aligned_cols=73 Identities=18% Similarity=0.172 Sum_probs=44.8
Q ss_pred EEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCc-----CCCcchhhchHHHHHHHHhCCCCCcEEEEEech
Q 024065 13 VLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRI-----EDVHTFHAYSEPLMEVLASLPAEEKVILVGHSL 87 (273)
Q Consensus 13 v~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~-----~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~ 87 (273)
|++-|.|++...-..++..|..+ |+--.+-+|.--.|.... ...|.++.. ....++.+ +..--+|+|.|.
T Consensus 44 vl~cGNGgSaadAqHfaael~gR-f~~eR~~lpaIaLt~dsS~lTai~NDy~yd~v---FsRqveA~-g~~GDvLigIST 118 (176)
T COG0279 44 VLACGNGGSAADAQHFAAELTGR-FEKERPSLPAIALSTDSSVLTAIANDYGYDEV---FSRQVEAL-GQPGDVLIGIST 118 (176)
T ss_pred EEEECCCcchhhHHHHHHHHhhH-HHhcCCCCCeeEeecccHHHhhhhccccHHHH---HHHHHHhc-CCCCCEEEEEeC
Confidence 66668888888888888888765 554444444433331110 122333333 34566777 667778899998
Q ss_pred hHH
Q 024065 88 GGV 90 (273)
Q Consensus 88 Gg~ 90 (273)
.|.
T Consensus 119 SGN 121 (176)
T COG0279 119 SGN 121 (176)
T ss_pred CCC
Confidence 886
No 307
>PHA02114 hypothetical protein
Probab=59.49 E-value=17 Score=22.55 Aligned_cols=32 Identities=28% Similarity=0.328 Sum_probs=23.3
Q ss_pred eEEEEccCCCchhhHHHHHHHHhhCCcEEEEe
Q 024065 11 HFVLVHGVNHGAWCWYKLKARLVAGGHRVTAV 42 (273)
Q Consensus 11 ~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~ 42 (273)
+||+=-.+..+...|-.++..|.+.||+|++-
T Consensus 84 tivldvn~amsr~pwi~v~s~le~~g~~vvat 115 (127)
T PHA02114 84 TIVLDVNYAMSRAPWIKVISRLEEAGFNVVAT 115 (127)
T ss_pred eEEEEehhhhccCcHHHHHHHHHhcCceeeeh
Confidence 55555566667777888888888888888764
No 308
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=59.02 E-value=44 Score=29.32 Aligned_cols=43 Identities=21% Similarity=0.219 Sum_probs=30.5
Q ss_pred CCceEEEEccCCCchh---hHHHHHHHHhhCCcEEEEeccCCCCCC
Q 024065 8 EEKHFVLVHGVNHGAW---CWYKLKARLVAGGHRVTAVDLAASGIN 50 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~---~~~~~~~~l~~~g~~vi~~d~~G~G~s 50 (273)
-+.|++++||-....- .-..+...|..+|..|-..-+|+-|.+
T Consensus 550 i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~ 595 (620)
T COG1506 550 IKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHG 595 (620)
T ss_pred cCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcC
Confidence 3679999999864443 345677888888888877777754443
No 309
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=59.01 E-value=6.7 Score=30.65 Aligned_cols=35 Identities=17% Similarity=0.297 Sum_probs=24.8
Q ss_pred HHHHHHhCCCCCcEEEEEechhHHHHHHHHHHCCCc
Q 024065 67 LMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHK 102 (273)
Q Consensus 67 l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~ 102 (273)
+.+.+... +..+-++.|.|.|+.+|..++...++.
T Consensus 86 VlkaL~e~-gl~p~~i~GsSaGAivaa~~~~~t~~E 120 (323)
T cd07231 86 VVRTLVEH-QLLPRVIAGSSVGSIVCAIIATRTDEE 120 (323)
T ss_pred HHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCHHH
Confidence 33444444 667778999999999999988754433
No 310
>KOG4231 consensus Intracellular membrane-bound Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=58.65 E-value=8.6 Score=31.97 Aligned_cols=54 Identities=19% Similarity=0.267 Sum_probs=35.0
Q ss_pred hhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEE-----EEEechhHHHHHHHHHHC
Q 024065 33 VAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVI-----LVGHSLGGVTLALAADKF 99 (273)
Q Consensus 33 ~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-----lvG~S~Gg~~a~~~a~~~ 99 (273)
..+|.+|+.+|=-| +-.-.+-.+..-++++ ..++++ ++|.|.||++|..+...+
T Consensus 413 kg~G~rILSiDGGG------------trG~~~lqiL~kiekl-sgKpIheLFD~ICGvSTG~ilA~~Lg~k~ 471 (763)
T KOG4231|consen 413 KGQGLRILSIDGGG------------TRGLATLQILKKIEKL-SGKPIHELFDLICGVSTGGILAIALGVKL 471 (763)
T ss_pred CCCceEEEEecCCC------------ccchhHHHHHHHHHHh-cCCcHHHHHHHHhccCchHHHHHHHHhcC
Confidence 45688888888433 2122233444555666 556653 789999999999886543
No 311
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=57.32 E-value=20 Score=28.17 Aligned_cols=20 Identities=20% Similarity=0.230 Sum_probs=16.7
Q ss_pred EEEEechhHHHHHHHHHHCC
Q 024065 81 ILVGHSLGGVTLALAADKFP 100 (273)
Q Consensus 81 ~lvG~S~Gg~~a~~~a~~~p 100 (273)
.+.|.|+||.+|..++..++
T Consensus 35 ~i~GTStGgiIA~~la~g~s 54 (312)
T cd07212 35 WIAGTSTGGILALALLHGKS 54 (312)
T ss_pred EEEeeChHHHHHHHHHcCCC
Confidence 47799999999999997543
No 312
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=56.89 E-value=12 Score=32.04 Aligned_cols=34 Identities=26% Similarity=0.133 Sum_probs=26.4
Q ss_pred EEEEEechhHHHHHHHHHHCC-CccceeEEeeccC
Q 024065 80 VILVGHSLGGVTLALAADKFP-HKISVAVFVTAFM 113 (273)
Q Consensus 80 ~~lvG~S~Gg~~a~~~a~~~p-~~v~~lil~~~~~ 113 (273)
++.-+.|-||..++..|.+.. ..|++++.-.|..
T Consensus 287 VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v 321 (690)
T PF10605_consen 287 VIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNV 321 (690)
T ss_pred EEEEeecCccHHHHhHhhcccCCceeeEEecCCcc
Confidence 455589999999999998754 4688888887754
No 313
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=56.86 E-value=15 Score=31.26 Aligned_cols=31 Identities=16% Similarity=0.213 Sum_probs=24.3
Q ss_pred HHHH-HhCCCCCcEEEEEechhHHHHHHHHHHC
Q 024065 68 MEVL-ASLPAEEKVILVGHSLGGVTLALAADKF 99 (273)
Q Consensus 68 ~~~l-~~~~~~~~~~lvG~S~Gg~~a~~~a~~~ 99 (273)
.+++ +.. +.++-.++|||+|=..|+..|--.
T Consensus 255 a~ll~~~~-GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 255 TQLLCDEF-AIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHhc-CCCCCEEeecCHHHHHHHHHhCCC
Confidence 3445 466 889999999999998888777544
No 314
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=56.64 E-value=51 Score=25.46 Aligned_cols=81 Identities=17% Similarity=0.189 Sum_probs=46.8
Q ss_pred EEEEccCCCchhh-HHHHHHHHhhCCc-------EEEEeccCCCCCCCCCcCCCcchhhc--------hHHHHHHHHhCC
Q 024065 12 FVLVHGVNHGAWC-WYKLKARLVAGGH-------RVTAVDLAASGINMKRIEDVHTFHAY--------SEPLMEVLASLP 75 (273)
Q Consensus 12 vv~lhG~~~~~~~-~~~~~~~l~~~g~-------~vi~~d~~G~G~s~~~~~~~~~~~~~--------~~~l~~~l~~~~ 75 (273)
-+++.|.|+..-. -+.+...+.+.|. +++.+|..|-=..++.... ..-..+ ..++.++++..
T Consensus 27 ~iv~~GAGsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~-~~~~~~a~~~~~~~~~~L~e~i~~v- 104 (279)
T cd05312 27 RILFLGAGSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLT-PFKKPFARKDEEKEGKSLLEVVKAV- 104 (279)
T ss_pred EEEEECcCHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcch-HHHHHHHhhcCcccCCCHHHHHHhc-
Confidence 3455566654433 4555666666676 8999999885333322110 011111 23567777766
Q ss_pred CCCcEEEEEech-hHHHHHHHH
Q 024065 76 AEEKVILVGHSL-GGVTLALAA 96 (273)
Q Consensus 76 ~~~~~~lvG~S~-Gg~~a~~~a 96 (273)
++-+|+|-|- ||.+.-...
T Consensus 105 --~ptvlIG~S~~~g~ft~evv 124 (279)
T cd05312 105 --KPTVLIGLSGVGGAFTEEVV 124 (279)
T ss_pred --CCCEEEEeCCCCCCCCHHHH
Confidence 7889999995 676554443
No 315
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=56.05 E-value=18 Score=26.66 Aligned_cols=30 Identities=40% Similarity=0.423 Sum_probs=22.4
Q ss_pred ceEEEEccCCCchhhHHHHHHHHhhCCcEEEEecc
Q 024065 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDL 44 (273)
Q Consensus 10 ~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~ 44 (273)
+.=||++|-|.+.. +..|+++||+|+.+|+
T Consensus 38 ~~rvLvPgCG~g~D-----~~~La~~G~~VvGvDl 67 (218)
T PF05724_consen 38 GGRVLVPGCGKGYD-----MLWLAEQGHDVVGVDL 67 (218)
T ss_dssp SEEEEETTTTTSCH-----HHHHHHTTEEEEEEES
T ss_pred CCeEEEeCCCChHH-----HHHHHHCCCeEEEEec
Confidence 34578888776654 3457788999999997
No 316
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=55.60 E-value=52 Score=25.94 Aligned_cols=98 Identities=16% Similarity=0.101 Sum_probs=56.5
Q ss_pred eEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEechh--
Q 024065 11 HFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLG-- 88 (273)
Q Consensus 11 ~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~G-- 88 (273)
+++++-- +-...|..+.+.+..+++.-.-+=++-||........ ...+.-...+..++..+ ...+++|||-|-=
T Consensus 215 pvfYvSn--SPw~~f~~L~efi~~~~~P~GPl~L~~~g~~~~~i~~-sga~rK~~~l~nil~~~-p~~kfvLVGDsGE~D 290 (373)
T COG4850 215 PVFYVSN--SPWQLFPTLQEFITNRNFPYGPLLLRRWGGVLDNIIE-SGAARKGQSLRNILRRY-PDRKFVLVGDSGEHD 290 (373)
T ss_pred CeEEecC--ChhHhHHHHHHHHhcCCCCCCchhHhhcCCccccccc-chhhhcccHHHHHHHhC-CCceEEEecCCCCcC
Confidence 5555521 2233466677777766665444444444422211111 12233334466678888 8899999997632
Q ss_pred HHHHHHHHHHCCCccceeEEeecc
Q 024065 89 GVTLALAADKFPHKISVAVFVTAF 112 (273)
Q Consensus 89 g~~a~~~a~~~p~~v~~lil~~~~ 112 (273)
=.+=.+++..+|++|.++.+=+..
T Consensus 291 peIYae~v~~fP~RIl~I~IRdvs 314 (373)
T COG4850 291 PEIYAEMVRCFPNRILGIYIRDVS 314 (373)
T ss_pred HHHHHHHHHhCccceeeEeeeecc
Confidence 124456677899999998766644
No 317
>COG0218 Predicted GTPase [General function prediction only]
Probab=54.99 E-value=19 Score=26.06 Aligned_cols=56 Identities=7% Similarity=0.051 Sum_probs=33.0
Q ss_pred cceEEEEeecCCCCCCHHHH---HHHHHhC---CCce--EEEEecCCccccccChHhHHHHHHHHHhc
Q 024065 206 SVKRVYLVCEEDIGLPKQFQ---HWMIQNY---PVNE--VMEIKGGDHMAMLSDPQKLCDCLSQISLN 265 (273)
Q Consensus 206 ~~Pvl~i~g~~D~~~~~~~~---~~~~~~~---~~~~--~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 265 (273)
.+|++++.-.-|.+-..+.. ...++.+ +... +..++-..... -+++.+.|.+++..
T Consensus 135 ~i~~~vv~tK~DKi~~~~~~k~l~~v~~~l~~~~~~~~~~~~~ss~~k~G----i~~l~~~i~~~~~~ 198 (200)
T COG0218 135 GIPVIVVLTKADKLKKSERNKQLNKVAEELKKPPPDDQWVVLFSSLKKKG----IDELKAKILEWLKE 198 (200)
T ss_pred CCCeEEEEEccccCChhHHHHHHHHHHHHhcCCCCccceEEEEecccccC----HHHHHHHHHHHhhc
Confidence 88999999999998765543 2333322 2222 44444222221 36777777777754
No 318
>PF04244 DPRP: Deoxyribodipyrimidine photo-lyase-related protein; InterPro: IPR007357 This family appears to be related to DNA photolyases.; PDB: 3ZXS_A.
Probab=54.94 E-value=36 Score=25.27 Aligned_cols=48 Identities=17% Similarity=0.304 Sum_probs=28.5
Q ss_pred HHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEE
Q 024065 25 WYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILV 83 (273)
Q Consensus 25 ~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lv 83 (273)
.+.+++.|.++|++|..+.+.- ..+..++.+.|.+.++.. +.+.+.++
T Consensus 51 MRhfa~~L~~~G~~V~Y~~~~~----------~~~~~s~~~~L~~~~~~~-~~~~~~~~ 98 (224)
T PF04244_consen 51 MRHFADELRAKGFRVHYIELDD----------PENTQSFEDALARALKQH-GIDRLHVM 98 (224)
T ss_dssp HHHHHHHHHHTT--EEEE-TT-----------TT--SSHHHHHHHHHHHH-----EEEE
T ss_pred HHHHHHHHHhCCCEEEEEeCCC----------ccccccHHHHHHHHHHHc-CCCEEEEE
Confidence 3677889999999999998741 123346677788888887 76777766
No 319
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=54.55 E-value=45 Score=22.99 Aligned_cols=56 Identities=16% Similarity=0.213 Sum_probs=31.9
Q ss_pred HHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEechhHHHHHHH
Q 024065 28 LKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALA 95 (273)
Q Consensus 28 ~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~ 95 (273)
+...+.+ |-.|+++|.+| ...+-+++++.+..+-+. +.+=.+++|-|.|=.-++..
T Consensus 60 il~~i~~-~~~vi~Ld~~G---------k~~sSe~fA~~l~~~~~~--G~~i~f~IGG~~Gl~~~~~~ 115 (155)
T COG1576 60 ILAAIPK-GSYVVLLDIRG---------KALSSEEFADFLERLRDD--GRDISFLIGGADGLSEAVKA 115 (155)
T ss_pred HHHhcCC-CCeEEEEecCC---------CcCChHHHHHHHHHHHhc--CCeEEEEEeCcccCCHHHHH
Confidence 3344433 56788889887 224556666665554432 42345577888875444433
No 320
>PF03283 PAE: Pectinacetylesterase
Probab=53.65 E-value=46 Score=26.85 Aligned_cols=38 Identities=32% Similarity=0.616 Sum_probs=25.2
Q ss_pred CCCCCcEEEEEechhHHHHHHH----HHHCCCccceeEEeec
Q 024065 74 LPAEEKVILVGHSLGGVTLALA----ADKFPHKISVAVFVTA 111 (273)
Q Consensus 74 ~~~~~~~~lvG~S~Gg~~a~~~----a~~~p~~v~~lil~~~ 111 (273)
+...++++|-|.|.||.-++.. ....|..++-.++.++
T Consensus 152 l~~a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~Ds 193 (361)
T PF03283_consen 152 LPNAKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDS 193 (361)
T ss_pred CcccceEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccc
Confidence 4456789999999999977654 3456654444444444
No 321
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=53.38 E-value=1e+02 Score=25.10 Aligned_cols=34 Identities=24% Similarity=0.291 Sum_probs=24.4
Q ss_pred CCCcEEEEEec-hhHHHHHHHHHHCCCccceeEEeecc
Q 024065 76 AEEKVILVGHS-LGGVTLALAADKFPHKISVAVFVTAF 112 (273)
Q Consensus 76 ~~~~~~lvG~S-~Gg~~a~~~a~~~p~~v~~lil~~~~ 112 (273)
...++.++|.. .|+.++..++.. -|..+.+++.-
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~---Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAA---GVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHc---CCCeEEEEeCC
Confidence 55789999875 566677666643 37788888864
No 322
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=53.18 E-value=26 Score=26.13 Aligned_cols=32 Identities=22% Similarity=0.269 Sum_probs=22.9
Q ss_pred HHHHHhCCCCC--cEEEEEechhHHHHHHHHHHCC
Q 024065 68 MEVLASLPAEE--KVILVGHSLGGVTLALAADKFP 100 (273)
Q Consensus 68 ~~~l~~~~~~~--~~~lvG~S~Gg~~a~~~a~~~p 100 (273)
.+.+.+. +.. .-.++|-|.|+.++..++...+
T Consensus 18 l~~L~e~-gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 18 LSLLIEA-GVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHc-CCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 3444444 444 3479999999999999987654
No 323
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=53.04 E-value=20 Score=24.81 Aligned_cols=44 Identities=14% Similarity=0.157 Sum_probs=26.9
Q ss_pred CcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEechhH
Q 024065 36 GHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGG 89 (273)
Q Consensus 36 g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg 89 (273)
+-.++++|-.| ...+-+++++.+..+...- ..+-+++||-+.|=
T Consensus 67 ~~~~i~Ld~~G---------k~~sS~~fA~~l~~~~~~g-~~~i~F~IGG~~G~ 110 (155)
T PF02590_consen 67 NDYVILLDERG---------KQLSSEEFAKKLERWMNQG-KSDIVFIIGGADGL 110 (155)
T ss_dssp TSEEEEE-TTS---------EE--HHHHHHHHHHHHHTT-S-EEEEEE-BTTB-
T ss_pred CCEEEEEcCCC---------ccCChHHHHHHHHHHHhcC-CceEEEEEecCCCC
Confidence 46788888876 3356677888777777653 33456788888873
No 324
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=52.29 E-value=93 Score=22.94 Aligned_cols=37 Identities=22% Similarity=0.167 Sum_probs=21.5
Q ss_pred CceEEEEccCCCchhhH-HHHHHHHhhCCc-EEEEeccC
Q 024065 9 EKHFVLVHGVNHGAWCW-YKLKARLVAGGH-RVTAVDLA 45 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~-~~~~~~l~~~g~-~vi~~d~~ 45 (273)
.-.|++.||....+... .-+-..|.+.|| .|++...-
T Consensus 138 e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve 176 (265)
T COG4822 138 EILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVE 176 (265)
T ss_pred eEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEec
Confidence 45677778877666553 333344555666 55555443
No 325
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=52.04 E-value=47 Score=23.07 Aligned_cols=41 Identities=17% Similarity=0.213 Sum_probs=21.1
Q ss_pred EEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEechh
Q 024065 38 RVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLG 88 (273)
Q Consensus 38 ~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~G 88 (273)
.++++|-+| ...+-.++++.+......- ..+-++++|-+.|
T Consensus 69 ~~i~LDe~G---------k~~sS~~fA~~l~~~~~~g-~~~i~F~IGGa~G 109 (157)
T PRK00103 69 RVIALDERG---------KQLSSEEFAQELERWRDDG-RSDVAFVIGGADG 109 (157)
T ss_pred EEEEEcCCC---------CcCCHHHHHHHHHHHHhcC-CccEEEEEcCccc
Confidence 466667665 2245556666655553322 1234556666555
No 326
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=51.72 E-value=80 Score=25.15 Aligned_cols=34 Identities=18% Similarity=0.127 Sum_probs=24.7
Q ss_pred EEEEccCCCchhhHHHHHHHHhhCCcEEEEeccC
Q 024065 12 FVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLA 45 (273)
Q Consensus 12 vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~ 45 (273)
++...|.++....+..++..|.++|+.|..+-..
T Consensus 5 ~i~~~g~gG~~~~~~~la~~L~~~g~ev~vv~~~ 38 (357)
T PRK00726 5 LLAGGGTGGHVFPALALAEELKKRGWEVLYLGTA 38 (357)
T ss_pred EEEcCcchHhhhHHHHHHHHHHhCCCEEEEEECC
Confidence 3444567766666678999999999998877543
No 327
>PF14359 DUF4406: Domain of unknown function (DUF4406)
Probab=50.56 E-value=59 Score=20.15 Aligned_cols=68 Identities=18% Similarity=0.181 Sum_probs=46.2
Q ss_pred hhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEE-E--echhHHHHHHHHHHC
Q 024065 23 WCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILV-G--HSLGGVTLALAADKF 99 (273)
Q Consensus 23 ~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lv-G--~S~Gg~~a~~~a~~~ 99 (273)
..|...+..|.+.||.|+.+-..+ .+ ...+++++.+.-..+|... +-++++ | .|-|+.+=..+|...
T Consensus 16 ~~f~~~a~~L~~~G~~vvnPa~~~-----~~--~~~~~~~ym~~~l~~L~~c---D~i~~l~gWe~S~GA~~E~~~A~~l 85 (92)
T PF14359_consen 16 PAFNAAAKRLRAKGYEVVNPAELG-----IP--EGLSWEEYMRICLAMLSDC---DAIYMLPGWENSRGARLEHELAKKL 85 (92)
T ss_pred HHHHHHHHHHHHCCCEEeCchhhC-----CC--CCCCHHHHHHHHHHHHHhC---CEEEEcCCcccCcchHHHHHHHHHC
Confidence 446778889999999999776541 11 2236666666666666654 455555 4 799999888888765
Q ss_pred C
Q 024065 100 P 100 (273)
Q Consensus 100 p 100 (273)
.
T Consensus 86 G 86 (92)
T PF14359_consen 86 G 86 (92)
T ss_pred C
Confidence 4
No 328
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=50.55 E-value=20 Score=26.64 Aligned_cols=28 Identities=14% Similarity=0.175 Sum_probs=19.9
Q ss_pred EEEEccCCCchhhHHHHHHHHhhCCcEEEEecc
Q 024065 12 FVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDL 44 (273)
Q Consensus 12 vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~ 44 (273)
=||++|-|-+.+ +..|+++||+|+.+|+
T Consensus 46 rvLvPgCGkg~D-----~~~LA~~G~~V~GvDl 73 (226)
T PRK13256 46 VCLIPMCGCSID-----MLFFLSKGVKVIGIEL 73 (226)
T ss_pred eEEEeCCCChHH-----HHHHHhCCCcEEEEec
Confidence 466666665443 2357788999999997
No 329
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=50.21 E-value=1.2e+02 Score=23.45 Aligned_cols=72 Identities=14% Similarity=0.158 Sum_probs=42.2
Q ss_pred HHHHHhh-CCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEE-EechhHHHHHHHHHHCC-Cccc
Q 024065 28 LKARLVA-GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILV-GHSLGGVTLALAADKFP-HKIS 104 (273)
Q Consensus 28 ~~~~l~~-~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lv-G~S~Gg~~a~~~a~~~p-~~v~ 104 (273)
....+.+ .++.++.+|-+|.... -....+.+.++++.. ....+++| .-++++.-+...+.++. -.++
T Consensus 145 ~l~~l~~~~~~D~ViIDt~Gr~~~---------~~~~l~el~~~~~~~-~~~~~~LVl~a~~~~~d~~~~~~~f~~~~~~ 214 (270)
T PRK06731 145 ALTYFKEEARVDYILIDTAGKNYR---------ASETVEEMIETMGQV-EPDYICLTLSASMKSKDMIEIITNFKDIHID 214 (270)
T ss_pred HHHHHHhcCCCCEEEEECCCCCcC---------CHHHHHHHHHHHhhh-CCCeEEEEEcCccCHHHHHHHHHHhCCCCCC
Confidence 3344443 3589999999885322 133444455666555 33455554 45677777777777654 3566
Q ss_pred eeEEe
Q 024065 105 VAVFV 109 (273)
Q Consensus 105 ~lil~ 109 (273)
++|+.
T Consensus 215 ~~I~T 219 (270)
T PRK06731 215 GIVFT 219 (270)
T ss_pred EEEEE
Confidence 77654
No 330
>cd08769 DAP_dppA_2 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=49.53 E-value=76 Score=24.41 Aligned_cols=53 Identities=11% Similarity=0.094 Sum_probs=35.1
Q ss_pred cceEEEEeecCCCCCCHHHHHHHHHhCCCceEEEEe-cCCcccc-ccChHhHHHHHHHHHh
Q 024065 206 SVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIK-GGDHMAM-LSDPQKLCDCLSQISL 264 (273)
Q Consensus 206 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~-~~gH~~~-~~~~~~~~~~i~~fl~ 264 (273)
.+||+++.|++ ...++..+.+|+++.+.++ +-|++.- .-.|++..+.|.+=.+
T Consensus 147 gVPV~lVsGDd------~~~~ea~~~~P~~~tv~vK~~~gr~aA~~~~p~~a~~~I~~aa~ 201 (270)
T cd08769 147 GVPVVLVAGDS------ELEKEVKEETPWAVFVPTKESLSRYSAKSPSMKKVKEELREAVK 201 (270)
T ss_pred CCCEEEEecCH------HHHHHHHHhCCCceEEEEeeecCCCccccCCHHHHHHHHHHHHH
Confidence 89999999976 3455566677999888877 3464443 3445666665555443
No 331
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=49.24 E-value=26 Score=27.30 Aligned_cols=28 Identities=18% Similarity=0.247 Sum_probs=21.8
Q ss_pred CCCcEEEEEechhHHHHHHHHHHCCCcc
Q 024065 76 AEEKVILVGHSLGGVTLALAADKFPHKI 103 (273)
Q Consensus 76 ~~~~~~lvG~S~Gg~~a~~~a~~~p~~v 103 (273)
+..+-++.|.|.|+.+|..++....+.+
T Consensus 95 ~l~~~~i~GtSaGAi~aa~~~~~~~~El 122 (298)
T cd07206 95 DLLPRVISGSSAGAIVAALLGTHTDEEL 122 (298)
T ss_pred CCCCCEEEEEcHHHHHHHHHHcCCcHHH
Confidence 5566789999999999999987544433
No 332
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=49.15 E-value=1.6e+02 Score=24.88 Aligned_cols=87 Identities=21% Similarity=0.126 Sum_probs=52.6
Q ss_pred CCceEEEEccCCCchhhHH--HHHHHHhhCCcE-EEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhC-CCCCcEEEE
Q 024065 8 EEKHFVLVHGVNHGAWCWY--KLKARLVAGGHR-VTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL-PAEEKVILV 83 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~--~~~~~l~~~g~~-vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~lv 83 (273)
..|..|.+-|+-. .+-|. .+++.| |.. .+.-|.|=-|.+=..-...+ -....+-|.+.++.| ...+.++|-
T Consensus 288 KPPL~VYFSGyR~-aEGFEgy~MMk~L---g~PfLL~~DpRleGGaFYlGs~ey-E~~I~~~I~~~L~~LgF~~~qLILS 362 (511)
T TIGR03712 288 KPPLNVYFSGYRP-AEGFEGYFMMKRL---GAPFLLIGDPRLEGGAFYLGSDEY-EQGIINVIQEKLDYLGFDHDQLILS 362 (511)
T ss_pred CCCeEEeeccCcc-cCcchhHHHHHhc---CCCeEEeeccccccceeeeCcHHH-HHHHHHHHHHHHHHhCCCHHHeeec
Confidence 3556788888854 44454 334444 333 34447775554422211111 233455566777777 244679999
Q ss_pred EechhHHHHHHHHHHC
Q 024065 84 GHSLGGVTLALAADKF 99 (273)
Q Consensus 84 G~S~Gg~~a~~~a~~~ 99 (273)
|-|||..-|+.+++..
T Consensus 363 GlSMGTfgAlYYga~l 378 (511)
T TIGR03712 363 GLSMGTFGALYYGAKL 378 (511)
T ss_pred cccccchhhhhhcccC
Confidence 9999999999998764
No 333
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=49.05 E-value=35 Score=23.73 Aligned_cols=52 Identities=19% Similarity=0.064 Sum_probs=28.7
Q ss_pred hhhchHHHHHHHHhC-CCCCcEEEEEechhHHHHHHHHHHCCCccceeEEeec
Q 024065 60 FHAYSEPLMEVLASL-PAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTA 111 (273)
Q Consensus 60 ~~~~~~~l~~~l~~~-~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~~ 111 (273)
+++..+.+.++++.+ ...+++.++|-|..|...+.++...++.|..++=.+|
T Consensus 50 ~~~~~~~l~~~L~~~~~~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np 102 (160)
T PF08484_consen 50 VEQSKAELREFLEKLKAEGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNP 102 (160)
T ss_dssp HHHHHHHHHHHHHHHHHTT--EEEE---SHHHHHHHHHT--TTTS--EEES-G
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEEECcchHHHHHHHHhCCCcceeEEEEeCCh
Confidence 444455556666544 2447899999999999888888776777777775554
No 334
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=48.89 E-value=1e+02 Score=23.60 Aligned_cols=66 Identities=14% Similarity=0.053 Sum_probs=41.1
Q ss_pred CceEEEEccCCCchhhHHHHHHHHhhCCc-EEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEech
Q 024065 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGH-RVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSL 87 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~~~~~~~l~~~g~-~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~ 87 (273)
-|.++|.--.+--....+.+.+.+++.|. -++.+|+| -+..+++....+.. +.+.+.|+.=+.
T Consensus 95 ~Pivlm~Y~Npi~~~Gie~F~~~~~~~GvdGlivpDLP---------------~ee~~~~~~~~~~~-gi~~I~lvaPtt 158 (265)
T COG0159 95 VPIVLMTYYNPIFNYGIEKFLRRAKEAGVDGLLVPDLP---------------PEESDELLKAAEKH-GIDPIFLVAPTT 158 (265)
T ss_pred CCEEEEEeccHHHHhhHHHHHHHHHHcCCCEEEeCCCC---------------hHHHHHHHHHHHHc-CCcEEEEeCCCC
Confidence 34455544434344445677778888776 48899987 23344566666677 778888776555
Q ss_pred hHH
Q 024065 88 GGV 90 (273)
Q Consensus 88 Gg~ 90 (273)
.--
T Consensus 159 ~~~ 161 (265)
T COG0159 159 PDE 161 (265)
T ss_pred CHH
Confidence 443
No 335
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=48.48 E-value=93 Score=26.41 Aligned_cols=73 Identities=15% Similarity=0.084 Sum_probs=51.1
Q ss_pred CCceEEEEccCCCchhh--HHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEe
Q 024065 8 EEKHFVLVHGVNHGAWC--WYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGH 85 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~ 85 (273)
+.|.||++-|+-+++.. -..+...|..+|++|.++..|. .-+..-..+-.+-.+++..+.+.++=-
T Consensus 38 ~~~vlIv~eG~DaaGKg~~I~~l~~~ldprg~~v~~~~~P~------------~eE~~~~flwRfw~~lP~~G~I~IFdR 105 (493)
T TIGR03708 38 GFPVIILIEGWDGAGKGETINLLNEWMDPRGIETHAFGRPS------------DEERERPPMWRFWRRLPPKGKIGIFFG 105 (493)
T ss_pred CCeEEEEEeCCCCCChHHHHHHHHHHhCcCccEEEeCCCCC------------HHHhcCcHHHHHHHhCCCCCeEEEEcC
Confidence 47889999999666544 6789999999999999998762 112222335667777766677777766
Q ss_pred chhHHHH
Q 024065 86 SLGGVTL 92 (273)
Q Consensus 86 S~Gg~~a 92 (273)
|+=+-+.
T Consensus 106 SWY~~vl 112 (493)
T TIGR03708 106 SWYTRPL 112 (493)
T ss_pred cccchhh
Confidence 7655443
No 336
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=48.39 E-value=28 Score=26.78 Aligned_cols=29 Identities=17% Similarity=0.260 Sum_probs=22.9
Q ss_pred ceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccC
Q 024065 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLA 45 (273)
Q Consensus 10 ~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~ 45 (273)
|-|+|.-|.++ ..+.|+..||.|+.+|+-
T Consensus 253 Pmi~fakG~g~-------~Le~l~~tG~DVvgLDWT 281 (359)
T KOG2872|consen 253 PMILFAKGSGG-------ALEELAQTGYDVVGLDWT 281 (359)
T ss_pred ceEEEEcCcch-------HHHHHHhcCCcEEeeccc
Confidence 67788877663 457788899999999974
No 337
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=48.39 E-value=1.3e+02 Score=23.58 Aligned_cols=35 Identities=23% Similarity=0.399 Sum_probs=23.9
Q ss_pred EEEEccC--CCchhhHHHHHHHHhhCCcEEEEeccCC
Q 024065 12 FVLVHGV--NHGAWCWYKLKARLVAGGHRVTAVDLAA 46 (273)
Q Consensus 12 vv~lhG~--~~~~~~~~~~~~~l~~~g~~vi~~d~~G 46 (273)
+++++|+ |+.......+++.|.++|++|..+...+
T Consensus 3 l~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~ 39 (360)
T cd04951 3 LYVITGLGLGGAEKQVVDLADQFVAKGHQVAIISLTG 39 (360)
T ss_pred EEEecCCCCCCHHHHHHHHHHhcccCCceEEEEEEeC
Confidence 4555654 3444446688999998899988776544
No 338
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=47.97 E-value=1.2e+02 Score=23.13 Aligned_cols=72 Identities=18% Similarity=0.314 Sum_probs=44.6
Q ss_pred CCceEEEEccCCCchhhHHHHHHHHhhCCc-EEEEeccCCCCCCCC-CcC-CCcchhhchHHHHHHHHhCCCCCcEEE-E
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGH-RVTAVDLAASGINMK-RIE-DVHTFHAYSEPLMEVLASLPAEEKVIL-V 83 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~-~vi~~d~~G~G~s~~-~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~l-v 83 (273)
.+.||++--|...+.+.|...++.+.+.|- +++... + |-|.. +.. ...++. .+. .++.. -.-++.+ .
T Consensus 131 ~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~l~~-r--G~s~y~~~~~~~~dl~----~i~-~lk~~-~~~pV~~ds 201 (260)
T TIGR01361 131 QGKPVLLKRGMGNTIEEWLYAAEYILSSGNGNVILCE-R--GIRTFEKATRNTLDLS----AVP-VLKKE-THLPIIVDP 201 (260)
T ss_pred CCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEE-C--CCCCCCCCCcCCcCHH----HHH-HHHHh-hCCCEEEcC
Confidence 377999999999899999999999988776 455544 3 33433 111 111211 122 23332 2257777 7
Q ss_pred Eechh
Q 024065 84 GHSLG 88 (273)
Q Consensus 84 G~S~G 88 (273)
.||.|
T Consensus 202 ~Hs~G 206 (260)
T TIGR01361 202 SHAAG 206 (260)
T ss_pred CCCCC
Confidence 99988
No 339
>PTZ00317 NADP-dependent malic enzyme; Provisional
Probab=47.66 E-value=55 Score=28.07 Aligned_cols=79 Identities=16% Similarity=0.114 Sum_probs=43.9
Q ss_pred EEEccCCCchh-hHHHHHHHHhhCCc-------EEEEeccCCCCCCCCCcCCCcchhhc-----------hHHHHHHHHh
Q 024065 13 VLVHGVNHGAW-CWYKLKARLVAGGH-------RVTAVDLAASGINMKRIEDVHTFHAY-----------SEPLMEVLAS 73 (273)
Q Consensus 13 v~lhG~~~~~~-~~~~~~~~l~~~g~-------~vi~~d~~G~G~s~~~~~~~~~~~~~-----------~~~l~~~l~~ 73 (273)
+++-|.|+..- .-+.+...+.+.|. +++.+|-.|-=..+....-...-..+ ..++.++++.
T Consensus 300 iv~~GAGsAgiGia~ll~~~m~~~Gls~eeA~~~i~~vD~~GLl~~~r~~~l~~~k~~fa~~~~~~~~~~~~~L~e~v~~ 379 (559)
T PTZ00317 300 IVFFGAGSAAIGVANNIADLAAEYGVTREEALKSFYLVDSKGLVTTTRGDKLAKHKVPFARTDISAEDSSLKTLEDVVRF 379 (559)
T ss_pred EEEECCCHHHHHHHHHHHHHHHHcCCChhHhcCeEEEEcCCCeEeCCCCccccHHHHHHhccccccccccCCCHHHHHhc
Confidence 44456554443 34455556666676 89999988843332211000000001 2356677765
Q ss_pred CCCCCcEEEEEech-hHHHHHH
Q 024065 74 LPAEEKVILVGHSL-GGVTLAL 94 (273)
Q Consensus 74 ~~~~~~~~lvG~S~-Gg~~a~~ 94 (273)
. +|-+|+|-|- ||.+.-.
T Consensus 380 ~---KPtvLIG~S~~~g~Ft~e 398 (559)
T PTZ00317 380 V---KPTALLGLSGVGGVFTEE 398 (559)
T ss_pred c---CCCEEEEecCCCCCCCHH
Confidence 5 8999999996 6654443
No 340
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=47.65 E-value=1.5e+02 Score=25.85 Aligned_cols=104 Identities=18% Similarity=0.215 Sum_probs=56.5
Q ss_pred cCCCCceEEEEccCCCchhhHHHHHH--------HHhhCCcEEEEeccC----CCCCCCCCcCC--CcchhhchHHHHHH
Q 024065 5 VGMEEKHFVLVHGVNHGAWCWYKLKA--------RLVAGGHRVTAVDLA----ASGINMKRIED--VHTFHAYSEPLMEV 70 (273)
Q Consensus 5 ~g~~~~~vv~lhG~~~~~~~~~~~~~--------~l~~~g~~vi~~d~~----G~G~s~~~~~~--~~~~~~~~~~l~~~ 70 (273)
....+-|+=+-=|++-+......+.+ .|.+-|=.|+.-..- -+|..+.+... ......+...+.+.
T Consensus 254 s~~~~ipLTLSiGvg~g~~~~~elg~vA~~~L~lAlgRGGDQVvIke~~~k~~fyGG~s~~~ekrTRvRaRvis~al~d~ 333 (655)
T COG3887 254 SSQKNIPLTLSIGVGYGENNLIELGEVAQSNLDLALGRGGDQVVIKENNGKVRFYGGKSNPMEKRTRVRARVISTALSDI 333 (655)
T ss_pred hhccCcceEEEEEeccCcccHHHHHHHHHHhHHHHhccCCceEEEEcCCCceeeeCCCcchhHHhHHHHHHHHHHHHHHH
Confidence 33446677777788777666544333 222223344444322 23433322211 11233344444555
Q ss_pred HHhCCCCCcEEEEEe------chhHHHHHHHHHHCCCccceeEEeecc
Q 024065 71 LASLPAEEKVILVGH------SLGGVTLALAADKFPHKISVAVFVTAF 112 (273)
Q Consensus 71 l~~~~~~~~~~lvG~------S~Gg~~a~~~a~~~p~~v~~lil~~~~ 112 (273)
+.. .++++++|| +.|+.+++...+..-.+ .+.+.++|.
T Consensus 334 i~e---~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~ 377 (655)
T COG3887 334 IKE---SDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPE 377 (655)
T ss_pred Hhh---cCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECcc
Confidence 544 489999999 78999998765544334 566777753
No 341
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=46.90 E-value=37 Score=25.54 Aligned_cols=21 Identities=19% Similarity=0.218 Sum_probs=18.2
Q ss_pred EEEEEechhHHHHHHHHHHCC
Q 024065 80 VILVGHSLGGVTLALAADKFP 100 (273)
Q Consensus 80 ~~lvG~S~Gg~~a~~~a~~~p 100 (273)
-.++|-|.|+.+|..++...+
T Consensus 33 ~~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 33 RRIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred CEEEEEcHHHHHHHHHHhCCC
Confidence 389999999999999987654
No 342
>PRK00091 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed
Probab=46.83 E-value=72 Score=25.10 Aligned_cols=73 Identities=12% Similarity=0.181 Sum_probs=39.0
Q ss_pred CceEEEEccCCCchhhHHHHHHHHhhC-CcEEEEeccCC------CCCCC----------------CCcCCCcchhhchH
Q 024065 9 EKHFVLVHGVNHGAWCWYKLKARLVAG-GHRVTAVDLAA------SGINM----------------KRIEDVHTFHAYSE 65 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~~~~~~~l~~~-g~~vi~~d~~G------~G~s~----------------~~~~~~~~~~~~~~ 65 (273)
.+.++++-|-.+++.. .++..|++. +..++..|-.- +|... ..+...++..++.+
T Consensus 3 ~~~~i~i~GptgsGKt--~la~~la~~~~~~iis~Ds~Qvy~~l~i~Takp~~~E~~gv~hhlid~~~~~~~~s~~~f~~ 80 (307)
T PRK00091 3 KPKVIVIVGPTASGKT--ALAIELAKRLNGEIISADSMQVYRGMDIGTAKPTAEERAGVPHHLIDILDPTESYSVADFQR 80 (307)
T ss_pred CceEEEEECCCCcCHH--HHHHHHHHhCCCcEEeccccceeecccccCCCCCHHHHcCccEEeecccChhhcccHHHHHH
Confidence 4567777777665543 233344333 45677777531 11111 11223467888888
Q ss_pred HHHHHHHhC-CCCCcEEEE
Q 024065 66 PLMEVLASL-PAEEKVILV 83 (273)
Q Consensus 66 ~l~~~l~~~-~~~~~~~lv 83 (273)
+....++.+ ...+.++++
T Consensus 81 ~a~~~i~~i~~~gk~pIlv 99 (307)
T PRK00091 81 DALAAIADILARGKLPILV 99 (307)
T ss_pred HHHHHHHHHHhCCCCEEEE
Confidence 888888765 222444555
No 343
>COG2452 Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair]
Probab=46.75 E-value=1e+02 Score=22.13 Aligned_cols=55 Identities=16% Similarity=0.170 Sum_probs=39.5
Q ss_pred CceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhC
Q 024065 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL 74 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~ 74 (273)
-.-||+.|----....|..+...+..+|..++.+|.- . .+.+++++|+.+++...
T Consensus 115 V~rVvV~ykDRL~RFGfe~le~~~~a~~~eivvv~~~----------e-~~~eELveDlisIltsf 169 (193)
T COG2452 115 VRRVVVSYKDRLNRFGFELVEAVCKAHNVEIVVVNQE----------D-KDSEELVEDLVSILTSF 169 (193)
T ss_pred eeEEEEEccchHhHHhHHHHHHHHHhcCcEEEEecCC----------C-CCHHHHHHHHHHHHHHH
Confidence 3456677765555555777778888888999998852 1 23499999999988765
No 344
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=46.46 E-value=37 Score=21.81 Aligned_cols=37 Identities=19% Similarity=0.233 Sum_probs=24.3
Q ss_pred EEEEccCCCchhhHHHHHHHHhhC-CcEEEEecc--CCCCCC
Q 024065 12 FVLVHGVNHGAWCWYKLKARLVAG-GHRVTAVDL--AASGIN 50 (273)
Q Consensus 12 vv~lhG~~~~~~~~~~~~~~l~~~-g~~vi~~d~--~G~G~s 50 (273)
+|++-|.++++... ++..|+++ |+.++..|- +-.+..
T Consensus 1 vI~I~G~~gsGKST--~a~~La~~~~~~~i~~d~~~~~~~~~ 40 (121)
T PF13207_consen 1 VIIISGPPGSGKST--LAKELAERLGFPVISMDDLIREPGWI 40 (121)
T ss_dssp EEEEEESTTSSHHH--HHHHHHHHHTCEEEEEHHHHCCGTHC
T ss_pred CEEEECCCCCCHHH--HHHHHHHHHCCeEEEecceEEecccc
Confidence 57888887777653 34445554 799999987 444443
No 345
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=46.11 E-value=43 Score=24.73 Aligned_cols=36 Identities=25% Similarity=0.314 Sum_probs=25.8
Q ss_pred CceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccC
Q 024065 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLA 45 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~ 45 (273)
.|..|++-|...+. .=..++..+.+.||.|++--.+
T Consensus 6 ~~k~VlItgcs~GG-IG~ala~ef~~~G~~V~AtaR~ 41 (289)
T KOG1209|consen 6 QPKKVLITGCSSGG-IGYALAKEFARNGYLVYATARR 41 (289)
T ss_pred CCCeEEEeecCCcc-hhHHHHHHHHhCCeEEEEEccc
Confidence 67778887754333 3346788899999999987543
No 346
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=45.80 E-value=1.4e+02 Score=24.53 Aligned_cols=61 Identities=18% Similarity=0.200 Sum_probs=33.1
Q ss_pred HHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEechhHHHHHHHHHHCCC
Q 024065 31 RLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPH 101 (273)
Q Consensus 31 ~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~ 101 (273)
.+.+.+|.||.+|--|.- ..-+.+-+.+.++.+.+ ..+.+++|=-+.=|.-|...|..+.+
T Consensus 178 ~fKke~fdvIIvDTSGRh---------~qe~sLfeEM~~v~~ai-~Pd~vi~VmDasiGQaae~Qa~aFk~ 238 (483)
T KOG0780|consen 178 RFKKENFDVIIVDTSGRH---------KQEASLFEEMKQVSKAI-KPDEIIFVMDASIGQAAEAQARAFKE 238 (483)
T ss_pred HHHhcCCcEEEEeCCCch---------hhhHHHHHHHHHHHhhc-CCCeEEEEEeccccHhHHHHHHHHHH
Confidence 344557888888865421 12244555566666666 55555555444444445555544443
No 347
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=45.65 E-value=95 Score=21.12 Aligned_cols=30 Identities=23% Similarity=0.289 Sum_probs=21.3
Q ss_pred cCCCchhhHHHHHHHHhhCCcEEEEeccCC
Q 024065 17 GVNHGAWCWYKLKARLVAGGHRVTAVDLAA 46 (273)
Q Consensus 17 G~~~~~~~~~~~~~~l~~~g~~vi~~d~~G 46 (273)
+.||.......++..|.++|++|..+-...
T Consensus 10 ~~GG~e~~~~~l~~~l~~~G~~v~v~~~~~ 39 (177)
T PF13439_consen 10 NIGGAERVVLNLARALAKRGHEVTVVSPGV 39 (177)
T ss_dssp SSSHHHHHHHHHHHHHHHTT-EEEEEESS-
T ss_pred CCChHHHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 445555667899999999999988885443
No 348
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=45.56 E-value=45 Score=23.63 Aligned_cols=32 Identities=22% Similarity=0.227 Sum_probs=21.3
Q ss_pred EEEccCCCchhh--HHHHHHHHhhCCcEEEEecc
Q 024065 13 VLVHGVNHGAWC--WYKLKARLVAGGHRVTAVDL 44 (273)
Q Consensus 13 v~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~d~ 44 (273)
.+..+-|+.+.. -..++..|+++|++|+.+|.
T Consensus 2 ~v~~~kGG~GKTt~a~~la~~la~~g~~VlliD~ 35 (195)
T PF01656_consen 2 AVTSGKGGVGKTTIAANLAQALARKGKKVLLIDL 35 (195)
T ss_dssp EEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEE
T ss_pred EEEcCCCCccHHHHHHHHHhcccccccccccccc
Confidence 334444444443 34688889999999999997
No 349
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=45.48 E-value=96 Score=21.89 Aligned_cols=53 Identities=21% Similarity=0.234 Sum_probs=33.4
Q ss_pred HhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEechh
Q 024065 32 LVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLG 88 (273)
Q Consensus 32 l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~G 88 (273)
|.+.|++.+.+|.=++=.... ...-..++.+.+.++.+.. +.+++.++..|.|
T Consensus 36 Lk~~Gik~li~DkDNTL~~~~---~~~i~~~~~~~~~~l~~~~-~~~~v~IvSNsaG 88 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPPY---EDEIPPEYAEWLNELKKQF-GKDRVLIVSNSAG 88 (168)
T ss_pred hhhcCceEEEEcCCCCCCCCC---cCcCCHHHHHHHHHHHHHC-CCCeEEEEECCCC
Confidence 788899999999855422211 1112244455555555555 5568999999986
No 350
>TIGR02363 dhaK1 dihydroxyacetone kinase, DhaK subunit. Two types of dihydroxyacetone kinase (glycerone kinase) are described. In yeast and a few bacteria, e.g. Citrobacter freundii, the enzyme is a single chain that uses ATP as phosphoryl donor and is designated EC 2.7.1.29. By contract, E. coli and many other bacterial species have a multisubunit form (EC 2.7.1.-) with a phosphoprotein donor related to PTS transport proteins. This family represents the DhaK subunit of the latter type of dihydroxyacetone kinase, but it specifically excludes the DhaK paralog DhaK2 (TIGR02362) found in the same operon as DhaK and DhaK in the Firmicutes.
Probab=45.22 E-value=90 Score=24.82 Aligned_cols=35 Identities=20% Similarity=0.324 Sum_probs=27.2
Q ss_pred CCceEEEEccCCCchhh-----HHHHHHHHhhCCcEEEEe
Q 024065 8 EEKHFVLVHGVNHGAWC-----WYKLKARLVAGGHRVTAV 42 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~-----~~~~~~~l~~~g~~vi~~ 42 (273)
+...+|++.|+|+++.. ++.+.+.|.++|..|...
T Consensus 252 gd~v~vlvN~LG~ts~lEl~i~~~~v~~~L~~~gi~v~r~ 291 (329)
T TIGR02363 252 GDRVIVLVNGMGATPLMELYIFYNDVQRLLEQRGVNVART 291 (329)
T ss_pred CCeEEEEEeCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 45789999999988865 577888888888775443
No 351
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=44.84 E-value=34 Score=22.69 Aligned_cols=34 Identities=18% Similarity=0.264 Sum_probs=23.6
Q ss_pred EEEEccCCCchhhHHHHHHHHhhCCcEEEEeccC
Q 024065 12 FVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLA 45 (273)
Q Consensus 12 vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~ 45 (273)
++...|..++-.-+-.+...|.++|++|...-.+
T Consensus 2 li~~~Gt~Ghv~P~lala~~L~~rGh~V~~~~~~ 35 (139)
T PF03033_consen 2 LIATGGTRGHVYPFLALARALRRRGHEVRLATPP 35 (139)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHTT-EEEEEETG
T ss_pred EEEEcCChhHHHHHHHHHHHHhccCCeEEEeecc
Confidence 4445566666666788999999999999755433
No 352
>PF13478 XdhC_C: XdhC Rossmann domain; PDB: 3ON5_A 2WE8_B 2WE7_A.
Probab=44.67 E-value=64 Score=21.73 Aligned_cols=30 Identities=33% Similarity=0.355 Sum_probs=17.9
Q ss_pred EEccCCCchhhHHHHHHHHhhCCcEEEEeccCC
Q 024065 14 LVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAA 46 (273)
Q Consensus 14 ~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G 46 (273)
++-|.|.... .+++....-||+|.++|.|.
T Consensus 2 ~I~GaG~va~---al~~la~~lg~~v~v~d~r~ 31 (136)
T PF13478_consen 2 VIFGAGHVAR---ALARLAALLGFRVTVVDPRP 31 (136)
T ss_dssp EEES-STCHH---HHHHHHHHCTEEEEEEES-C
T ss_pred EEEeCcHHHH---HHHHHHHhCCCEEEEEcCCc
Confidence 3445554444 44444555689999999983
No 353
>PRK06849 hypothetical protein; Provisional
Probab=44.40 E-value=95 Score=25.30 Aligned_cols=73 Identities=15% Similarity=0.179 Sum_probs=42.4
Q ss_pred CceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCC--CC-------cCCCcchhhchHHHHHHHHhCCCCCc
Q 024065 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINM--KR-------IEDVHTFHAYSEPLMEVLASLPAEEK 79 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~--~~-------~~~~~~~~~~~~~l~~~l~~~~~~~~ 79 (273)
+..|+++ |.+ ...-..+++.|.+.|++|++.|......+. .. +....+.+.+.+.+.++++.. +. .
T Consensus 4 ~~~VLI~-G~~--~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~-~i-d 78 (389)
T PRK06849 4 KKTVLIT-GAR--APAALELARLFHNAGHTVILADSLKYPLSRFSRAVDGFYTIPSPRWDPDAYIQALLSIVQRE-NI-D 78 (389)
T ss_pred CCEEEEe-CCC--cHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhhhheEEeCCCCCCHHHHHHHHHHHHHHc-CC-C
Confidence 4455555 332 223346778888899999999976433221 00 001124466778888888877 43 4
Q ss_pred EEEEEec
Q 024065 80 VILVGHS 86 (273)
Q Consensus 80 ~~lvG~S 86 (273)
+++-+.+
T Consensus 79 ~vIP~~e 85 (389)
T PRK06849 79 LLIPTCE 85 (389)
T ss_pred EEEECCh
Confidence 4444544
No 354
>TIGR00824 EIIA-man PTS system, mannose/fructose/sorbose family, IIA component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains.The Man family is unique in several respects among PTS permease families It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of E. coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for the IIA components.
Probab=44.31 E-value=87 Score=20.32 Aligned_cols=71 Identities=23% Similarity=0.258 Sum_probs=45.3
Q ss_pred eEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEechhHH
Q 024065 11 HFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGV 90 (273)
Q Consensus 11 ~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg~ 90 (273)
.|+.-||-. +.....-++.+....-+|.++++. ...+.+++.+.+.++++.+...+.++++.==+||.
T Consensus 4 ili~sHG~~--A~gl~~s~~~i~G~~~~i~~i~~~----------~~~~~~~~~~~l~~~i~~~~~~~~vivltDl~GGS 71 (116)
T TIGR00824 4 IIISGHGQA--AIALLKSAEMIFGEQNNVGAVPFV----------PGENAETLQEKYNAALADLDTEEEVLFLVDIFGGS 71 (116)
T ss_pred EEEEecHHH--HHHHHHHHHHHcCCcCCeEEEEcC----------CCcCHHHHHHHHHHHHHhcCCCCCEEEEEeCCCCC
Confidence 577778863 333444455554332457777764 22478889999999999884446777776666776
Q ss_pred HHH
Q 024065 91 TLA 93 (273)
Q Consensus 91 ~a~ 93 (273)
..-
T Consensus 72 p~n 74 (116)
T TIGR00824 72 PYN 74 (116)
T ss_pred HHH
Confidence 543
No 355
>PLN02748 tRNA dimethylallyltransferase
Probab=43.93 E-value=1.1e+02 Score=25.90 Aligned_cols=76 Identities=13% Similarity=0.131 Sum_probs=44.2
Q ss_pred CceEEEEccCCCchhhHHHHHHHHhhC-CcEEEEecc----CCC--CCCC----------------CCcCCCcchhhchH
Q 024065 9 EKHFVLVHGVNHGAWCWYKLKARLVAG-GHRVTAVDL----AAS--GINM----------------KRIEDVHTFHAYSE 65 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~~~~~~~l~~~-g~~vi~~d~----~G~--G~s~----------------~~~~~~~~~~~~~~ 65 (273)
++.+|++-|-.+++..- ++..|+++ +..||..|- +|. |... .++...|+..++.+
T Consensus 21 ~~~~i~i~GptgsGKs~--la~~la~~~~~eii~~DsmQVYrgLdIgTaKpt~eE~~~VpHHLid~v~p~e~ysv~~F~~ 98 (468)
T PLN02748 21 KAKVVVVMGPTGSGKSK--LAVDLASHFPVEIINADSMQVYSGLDVLTNKVPLHEQKGVPHHLLGVISPSVEFTAKDFRD 98 (468)
T ss_pred CCCEEEEECCCCCCHHH--HHHHHHHhcCeeEEcCchheeeCCcchhcCCCCHHHHcCCCCeeEeecCCCCcCcHHHHHH
Confidence 45577777776555442 23333333 457888882 222 1111 12335689999999
Q ss_pred HHHHHHHhC-CCCCcEEEEEec
Q 024065 66 PLMEVLASL-PAEEKVILVGHS 86 (273)
Q Consensus 66 ~l~~~l~~~-~~~~~~~lvG~S 86 (273)
+....|+.+ ...+..+|||-|
T Consensus 99 ~A~~~I~~I~~rgk~PIlVGGT 120 (468)
T PLN02748 99 HAVPLIEEILSRNGLPVIVGGT 120 (468)
T ss_pred HHHHHHHHHHhcCCCeEEEcCh
Confidence 999998887 233456677643
No 356
>PRK11468 dihydroxyacetone kinase subunit DhaK; Provisional
Probab=43.66 E-value=98 Score=24.89 Aligned_cols=34 Identities=15% Similarity=0.304 Sum_probs=26.5
Q ss_pred CCceEEEEccCCCchhh-----HHHHHHHHhhCCcEEEE
Q 024065 8 EEKHFVLVHGVNHGAWC-----WYKLKARLVAGGHRVTA 41 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~-----~~~~~~~l~~~g~~vi~ 41 (273)
+...+|++.|+|+++.. ++.+.+.|.++|..|..
T Consensus 275 gd~v~vLVNgLG~t~~~El~i~~~~v~~~L~~~gi~v~r 313 (356)
T PRK11468 275 GDRVIALVNNLGATPLSELYGVYNRLATRCEQAGLTIER 313 (356)
T ss_pred CCeEEEEEeCCCCCCHHHHHHHHHHHHHHHHHCCCEEEE
Confidence 45789999999988865 56788888888876543
No 357
>COG1763 MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]
Probab=43.39 E-value=70 Score=22.35 Aligned_cols=39 Identities=26% Similarity=0.233 Sum_probs=31.8
Q ss_pred ceEEEEccCCCchhh--HHHHHHHHhhCCcEEEEeccCCCC
Q 024065 10 KHFVLVHGVNHGAWC--WYKLKARLVAGGHRVTAVDLAASG 48 (273)
Q Consensus 10 ~~vv~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~d~~G~G 48 (273)
++|+=+-|+..++.. -..+++.|.++||+|-++-..+|+
T Consensus 2 ~~Il~ivG~k~SGKTTLie~lv~~L~~~G~rVa~iKH~hh~ 42 (161)
T COG1763 2 MKILGIVGYKNSGKTTLIEKLVRKLKARGYRVATVKHAHHD 42 (161)
T ss_pred CcEEEEEecCCCChhhHHHHHHHHHHhCCcEEEEEEecCCC
Confidence 356777788666544 578999999999999999999998
No 358
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=43.33 E-value=42 Score=25.34 Aligned_cols=21 Identities=19% Similarity=0.257 Sum_probs=17.7
Q ss_pred EEEEEechhHHHHHHHHHHCC
Q 024065 80 VILVGHSLGGVTLALAADKFP 100 (273)
Q Consensus 80 ~~lvG~S~Gg~~a~~~a~~~p 100 (273)
-.+.|-|.|+.+|..++...+
T Consensus 32 d~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 32 NKISGASAGALAACCLLCDLP 52 (245)
T ss_pred CeEEEEcHHHHHHHHHHhCCc
Confidence 349999999999999987655
No 359
>COG1092 Predicted SAM-dependent methyltransferases [General function prediction only]
Probab=42.92 E-value=69 Score=26.24 Aligned_cols=50 Identities=12% Similarity=0.015 Sum_probs=30.4
Q ss_pred cEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEechhH
Q 024065 37 HRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGG 89 (273)
Q Consensus 37 ~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg 89 (273)
|.||.+|.|.+++|....- .-..++.+-+...++-+ ..+-+.++..+.+.
T Consensus 291 fDlIilDPPsF~r~k~~~~--~~~rdy~~l~~~~~~iL-~pgG~l~~~s~~~~ 340 (393)
T COG1092 291 FDLIILDPPSFARSKKQEF--SAQRDYKDLNDLALRLL-APGGTLVTSSCSRH 340 (393)
T ss_pred ccEEEECCcccccCcccch--hHHHHHHHHHHHHHHHc-CCCCEEEEEecCCc
Confidence 9999999999999976541 13344444444555555 44445555444433
No 360
>PRK04148 hypothetical protein; Provisional
Probab=42.87 E-value=75 Score=21.41 Aligned_cols=43 Identities=9% Similarity=0.018 Sum_probs=26.2
Q ss_pred chHHHHHHHHhCCCCCcEEEEEechhHHHHHHHHHHCCCccceeEEee
Q 024065 63 YSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVT 110 (273)
Q Consensus 63 ~~~~l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~ 110 (273)
+++.+.+.+... ...++..||-..|..+|..++.. . ..++.++
T Consensus 4 i~~~l~~~~~~~-~~~kileIG~GfG~~vA~~L~~~-G---~~ViaID 46 (134)
T PRK04148 4 IAEFIAENYEKG-KNKKIVELGIGFYFKVAKKLKES-G---FDVIVID 46 (134)
T ss_pred HHHHHHHhcccc-cCCEEEEEEecCCHHHHHHHHHC-C---CEEEEEE
Confidence 333343333333 34679999999888888888743 2 2455555
No 361
>PLN03050 pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional
Probab=42.65 E-value=62 Score=24.47 Aligned_cols=34 Identities=21% Similarity=0.070 Sum_probs=27.5
Q ss_pred ceEEEEccCCCchhhHHHHHHHHhhCCcEEEEec
Q 024065 10 KHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVD 43 (273)
Q Consensus 10 ~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d 43 (273)
..|+++-|-|.+...=.-.++.|..+||+|.++-
T Consensus 61 ~~V~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~ 94 (246)
T PLN03050 61 PRVLLVCGPGNNGGDGLVAARHLAHFGYEVTVCY 94 (246)
T ss_pred CeEEEEECCCCCchhHHHHHHHHHHCCCeEEEEE
Confidence 4688888888888776678889988899987765
No 362
>PF13714 PEP_mutase: Phosphoenolpyruvate phosphomutase; PDB: 1ZLP_A 3EOO_C 1UJQ_D 1O5Q_A 2DUA_A 2HJP_A 2HRW_A 2QIW_A 3KZ2_B 3IH1_B ....
Probab=42.58 E-value=1.4e+02 Score=22.58 Aligned_cols=65 Identities=6% Similarity=0.055 Sum_probs=44.0
Q ss_pred ccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEE
Q 024065 16 HGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVG 84 (273)
Q Consensus 16 hG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG 84 (273)
.|+|.+.....+.++.+.+.|..-+.++=..+|. ......+.+++++-|.+.++.. ....++|++
T Consensus 78 ~GyG~~~~~v~~tv~~~~~aG~agi~IEDq~~~~---~~~~l~~~ee~~~kI~Aa~~a~-~~~~~~I~A 142 (238)
T PF13714_consen 78 TGYGNDPENVARTVRELERAGAAGINIEDQRCGH---GGKQLVSPEEMVAKIRAAVDAR-RDPDFVIIA 142 (238)
T ss_dssp TTSSSSHHHHHHHHHHHHHCT-SEEEEESBSTTT---STT-B--HHHHHHHHHHHHHHH-SSTTSEEEE
T ss_pred cccCchhHHHHHHHHHHHHcCCcEEEeeccccCC---CCCceeCHHHHHHHHHHHHHhc-cCCeEEEEE
Confidence 5777778888888889988887766664444552 2223458999999999999887 444466665
No 363
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=41.78 E-value=40 Score=25.69 Aligned_cols=78 Identities=12% Similarity=0.207 Sum_probs=38.0
Q ss_pred HHHHHHhhCCcEEEEeccCCC-CCCCCCcCCCcchhhchHHHHHHHHhC-CCCCcEEEEEechhHHHHH----HHHHHCC
Q 024065 27 KLKARLVAGGHRVTAVDLAAS-GINMKRIEDVHTFHAYSEPLMEVLASL-PAEEKVILVGHSLGGVTLA----LAADKFP 100 (273)
Q Consensus 27 ~~~~~l~~~g~~vi~~d~~G~-G~s~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~lvG~S~Gg~~a~----~~a~~~p 100 (273)
..+..+.+.|-.|+++.+--. |.+-... ...++++.++.+.++.+.. .-.+.+++++| ||.++. .+..++-
T Consensus 161 e~A~~M~~AGaDiiv~H~GlT~gG~~Ga~-~~~sl~~a~~~~~~i~~aa~~v~~dii~l~h--GGPI~~p~D~~~~l~~t 237 (268)
T PF09370_consen 161 EQARAMAEAGADIIVAHMGLTTGGSIGAK-TALSLEEAAERIQEIFDAARAVNPDIIVLCH--GGPIATPEDAQYVLRNT 237 (268)
T ss_dssp HHHHHHHHHT-SEEEEE-SS-----------S--HHHHHHHHHHHHHHHHCC-TT-EEEEE--CTTB-SHHHHHHHHHH-
T ss_pred HHHHHHHHcCCCEEEecCCccCCCCcCcc-ccCCHHHHHHHHHHHHHHHHHhCCCeEEEEe--CCCCCCHHHHHHHHhcC
Confidence 355667778899999886321 1121111 2358888877777777654 12345677776 887653 2333333
Q ss_pred CccceeE
Q 024065 101 HKISVAV 107 (273)
Q Consensus 101 ~~v~~li 107 (273)
..+.+.+
T Consensus 238 ~~~~Gf~ 244 (268)
T PF09370_consen 238 KGIHGFI 244 (268)
T ss_dssp TTEEEEE
T ss_pred CCCCEEe
Confidence 3355555
No 364
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=41.64 E-value=48 Score=25.17 Aligned_cols=22 Identities=18% Similarity=0.310 Sum_probs=18.5
Q ss_pred cEEEEEechhHHHHHHHHHHCC
Q 024065 79 KVILVGHSLGGVTLALAADKFP 100 (273)
Q Consensus 79 ~~~lvG~S~Gg~~a~~~a~~~p 100 (273)
.-.++|-|.|+.++..++...+
T Consensus 33 ~~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 33 ARMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred CCEEEEEcHHHHHHHHHHhCCC
Confidence 4468999999999999987655
No 365
>PRK04435 hypothetical protein; Provisional
Probab=41.56 E-value=1.1e+02 Score=20.87 Aligned_cols=76 Identities=18% Similarity=0.225 Sum_probs=41.2
Q ss_pred CceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccC--CCCCCCCCcC-CCcchhhchHHHHHHHHhCCCCCcEEEEEe
Q 024065 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLA--ASGINMKRIE-DVHTFHAYSEPLMEVLASLPAEEKVILVGH 85 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~--G~G~s~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~ 85 (273)
+..-+.++ .......+..+...+++.|.++..+... ..|...-... ...+.+...+++.+-++.+.+..++-++|.
T Consensus 68 r~vtL~i~-l~Dr~GlLs~Il~~IA~~~aNIltI~q~i~~~g~a~vs~tVevs~~~~~L~~Li~~L~~i~gV~~V~i~~~ 146 (147)
T PRK04435 68 KIITLSLL-LEDRSGTLSKVLNVIAEAGGNILTINQSIPLQGRANVTISIDTSSMEGDIDELLEKLRNLDGVEKVELIGM 146 (147)
T ss_pred cEEEEEEE-EecCCCHHHHHHHHHHHcCCCeEEEEEEcCCCCEEEEEEEEEeCChHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 33333333 3445567888999999999999988752 1111100000 001222234444444555567778888874
No 366
>PRK14481 dihydroxyacetone kinase subunit DhaK; Provisional
Probab=41.44 E-value=1.2e+02 Score=24.25 Aligned_cols=34 Identities=21% Similarity=0.313 Sum_probs=26.6
Q ss_pred CCceEEEEccCCCchhh-----HHHHHHHHhhCCcEEEE
Q 024065 8 EEKHFVLVHGVNHGAWC-----WYKLKARLVAGGHRVTA 41 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~-----~~~~~~~l~~~g~~vi~ 41 (273)
+...+|++.|+|+.+.. ++.+.+.|.++|..+..
T Consensus 251 gd~v~lLvN~LG~ts~lEl~i~~~~v~~~L~~~gi~i~r 289 (331)
T PRK14481 251 GDEVLVLVNGMGATPLMELYIVYNDVAELLEERGVTVAR 289 (331)
T ss_pred CCeEEEEEeCCCCCcHHHHHHHHHHHHHHHHHCCCEEEE
Confidence 45799999999988865 57788888888776543
No 367
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=41.26 E-value=51 Score=24.58 Aligned_cols=36 Identities=22% Similarity=0.309 Sum_probs=22.1
Q ss_pred CCceEEEEccCCCchhh-----HHHHHHHHhhCCcEEEEec
Q 024065 8 EEKHFVLVHGVNHGAWC-----WYKLKARLVAGGHRVTAVD 43 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~-----~~~~~~~l~~~g~~vi~~d 43 (273)
+++.|++.+|.+..... |..+++.|.++++.|+.+-
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g 144 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLG 144 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEc
Confidence 46778888888765544 5678889988877776543
No 368
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=41.24 E-value=1.9e+02 Score=24.55 Aligned_cols=59 Identities=12% Similarity=0.136 Sum_probs=37.7
Q ss_pred CceEEEEccCCCchhhH-----HHHHHHHhhCCcEEEEeccCC----CCCCCCCcCCCcchhhchHHHHHHHH
Q 024065 9 EKHFVLVHGVNHGAWCW-----YKLKARLVAGGHRVTAVDLAA----SGINMKRIEDVHTFHAYSEPLMEVLA 72 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~-----~~~~~~l~~~g~~vi~~d~~G----~G~s~~~~~~~~~~~~~~~~l~~~l~ 72 (273)
+.|||+++. .+..+| ..-+..|.+.|+.|+-++. | +|..... ....+++.++.+..++.
T Consensus 180 ~~PvliaPa--MN~~M~~npat~~Nl~~L~~~G~~vi~P~~-g~lA~~g~~G~G--rm~e~~~I~~~v~~~~~ 247 (475)
T PRK13982 180 NRPILLAPA--MNPLMWNNPATRRNVAQLKRDGVHMIGPNA-GEMAERGEAGVG--RMAEPLEIAAAAEALLR 247 (475)
T ss_pred CCCEEEEEc--CCHHHhcCHHHHHHHHHHHHCCCEEECCCC-CccccCCCcCCC--CCCCHHHHHHHHHHHHh
Confidence 467777775 445555 3556778888999886654 3 3444332 23477777777777663
No 369
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=40.85 E-value=1.7e+02 Score=22.57 Aligned_cols=94 Identities=13% Similarity=0.113 Sum_probs=52.8
Q ss_pred CCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEE-EEec
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVIL-VGHS 86 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l-vG~S 86 (273)
.+.||++--|..++.+.|...++.+...|-.=+.+=.||.- +. + .|...+.---....++.. -.-++.+ ..||
T Consensus 133 ~gkPV~lk~G~~~s~~e~~~A~e~i~~~Gn~~i~L~~rG~~-t~-~---~Y~~~~vdl~~i~~lk~~-~~~pV~~D~sHs 206 (266)
T PRK13398 133 TKKPILLKRGMSATLEEWLYAAEYIMSEGNENVVLCERGIR-TF-E---TYTRNTLDLAAVAVIKEL-SHLPIIVDPSHA 206 (266)
T ss_pred CCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCeEEEEECCCC-CC-C---CCCHHHHHHHHHHHHHhc-cCCCEEEeCCCc
Confidence 37799999999999999999999888776633333445531 11 0 122222211122334433 2356777 6999
Q ss_pred hh-----HHHHHHHHHHCCCccceeEEee
Q 024065 87 LG-----GVTLALAADKFPHKISVAVFVT 110 (273)
Q Consensus 87 ~G-----g~~a~~~a~~~p~~v~~lil~~ 110 (273)
.| ..++.... ... ++++++-.
T Consensus 207 ~G~~~~v~~~~~aAv-a~G--a~Gl~iE~ 232 (266)
T PRK13398 207 TGRRELVIPMAKAAI-AAG--ADGLMIEV 232 (266)
T ss_pred ccchhhHHHHHHHHH-HcC--CCEEEEec
Confidence 98 33333332 222 55666554
No 370
>TIGR03586 PseI pseudaminic acid synthase.
Probab=40.71 E-value=1.9e+02 Score=23.13 Aligned_cols=83 Identities=13% Similarity=0.017 Sum_probs=50.2
Q ss_pred CCceEEEEccCCCchhhHHHHHHHHhhCCc-EEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEec
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGH-RVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHS 86 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~-~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S 86 (273)
.+.||++--|. ++...|...++.+.+.|. .|+... +.|..|. ..++.--.....++.. -.-++.+..|+
T Consensus 133 ~gkPvilstG~-~t~~Ei~~Av~~i~~~g~~~i~Llh----C~s~YP~----~~~~~nL~~i~~lk~~-f~~pVG~SDHt 202 (327)
T TIGR03586 133 TGKPIIMSTGI-ATLEEIQEAVEACREAGCKDLVLLK----CTSSYPA----PLEDANLRTIPDLAER-FNVPVGLSDHT 202 (327)
T ss_pred cCCcEEEECCC-CCHHHHHHHHHHHHHCCCCcEEEEe----cCCCCCC----CcccCCHHHHHHHHHH-hCCCEEeeCCC
Confidence 36788888898 588889999999988776 455554 2333322 1122211222334443 22577788999
Q ss_pred hhHHHHHHHHHHCC
Q 024065 87 LGGVTLALAADKFP 100 (273)
Q Consensus 87 ~Gg~~a~~~a~~~p 100 (273)
.|-.+++.+.+.-.
T Consensus 203 ~G~~~~~aAva~GA 216 (327)
T TIGR03586 203 LGILAPVAAVALGA 216 (327)
T ss_pred CchHHHHHHHHcCC
Confidence 99766655554433
No 371
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=40.13 E-value=52 Score=24.94 Aligned_cols=22 Identities=18% Similarity=0.129 Sum_probs=18.3
Q ss_pred cEEEEEechhHHHHHHHHHHCC
Q 024065 79 KVILVGHSLGGVTLALAADKFP 100 (273)
Q Consensus 79 ~~~lvG~S~Gg~~a~~~a~~~p 100 (273)
.-.++|-|.|+.++..++...+
T Consensus 37 ~~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 37 ARKIYGASAGALTATALVTGVC 58 (249)
T ss_pred CCeEEEEcHHHHHHHHHHcCCC
Confidence 4568899999999999987654
No 372
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=40.05 E-value=56 Score=22.48 Aligned_cols=19 Identities=26% Similarity=0.069 Sum_probs=16.6
Q ss_pred CcEEEEEechhHHHHHHHH
Q 024065 78 EKVILVGHSLGGVTLALAA 96 (273)
Q Consensus 78 ~~~~lvG~S~Gg~~a~~~a 96 (273)
..-++.|.|.|+.++..++
T Consensus 28 ~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 28 CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCCEEEEEcHHHHHHHHHh
Confidence 5567889999999999998
No 373
>PRK06490 glutamine amidotransferase; Provisional
Probab=39.91 E-value=1.6e+02 Score=22.14 Aligned_cols=82 Identities=12% Similarity=0.033 Sum_probs=43.7
Q ss_pred CceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCC-CC---C---------CcCCCcchhhchHHHHHHHHhCC
Q 024065 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGI-NM---K---------RIEDVHTFHAYSEPLMEVLASLP 75 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~-s~---~---------~~~~~~~~~~~~~~l~~~l~~~~ 75 (273)
...+|+.|--.+...... +.|.+.|+.+-.++.. .|. .+ . .+...++...+...+.++++..
T Consensus 8 ~~vlvi~h~~~~~~g~l~---~~l~~~g~~~~v~~~~-~~~~~p~~l~~~dgvii~Ggp~~~~d~~~wi~~~~~~i~~~- 82 (239)
T PRK06490 8 RPVLIVLHQERSTPGRVG---QLLQERGYPLDIRRPR-LGDPLPDTLEDHAGAVIFGGPMSANDPDDFIRREIDWISVP- 82 (239)
T ss_pred ceEEEEecCCCCCChHHH---HHHHHCCCceEEEecc-CCCCCCCcccccCEEEEECCCCCCCCCchHHHHHHHHHHHH-
Confidence 456777787655555544 4444556655554321 111 00 0 0001123334556666677654
Q ss_pred CCCcEEEEEechhHHHHHHH
Q 024065 76 AEEKVILVGHSLGGVTLALA 95 (273)
Q Consensus 76 ~~~~~~lvG~S~Gg~~a~~~ 95 (273)
-..++-++|.++|..+...+
T Consensus 83 ~~~~~PvLGIC~G~Qlla~a 102 (239)
T PRK06490 83 LKENKPFLGICLGAQMLARH 102 (239)
T ss_pred HHCCCCEEEECHhHHHHHHH
Confidence 23455689999999876665
No 374
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=39.69 E-value=54 Score=26.16 Aligned_cols=86 Identities=14% Similarity=0.216 Sum_probs=52.0
Q ss_pred ceEEEEccCCCch-------hhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEE
Q 024065 10 KHFVLVHGVNHGA-------WCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVIL 82 (273)
Q Consensus 10 ~~vv~lhG~~~~~-------~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l 82 (273)
..+|++|+-..+. +.|+.+.+.+.++ -.+-.+|+...|.-+.. ++.-+..+.-+++. ..-++
T Consensus 198 gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k-~~~pffDmAYQGfaSG~------~d~DA~avR~F~~~----g~~~~ 266 (427)
T KOG1411|consen 198 GSIILLHACAHNPTGVDPTKEQWEKISDLIKEK-NLLPFFDMAYQGFASGD------LDKDAQAVRLFVED----GHEIL 266 (427)
T ss_pred CcEEEeehhhcCCCCCCccHHHHHHHHHHhhhc-cccchhhhhhcccccCC------chhhHHHHHHHHHc----CCceE
Confidence 3589999766555 4799888888776 35666787777655433 23333344444432 33345
Q ss_pred EEechhHHHHHHHHHHCCCccceeEEeec
Q 024065 83 VGHSLGGVTLALAADKFPHKISVAVFVTA 111 (273)
Q Consensus 83 vG~S~Gg~~a~~~a~~~p~~v~~lil~~~ 111 (273)
++.|+.-.+. .|.|+|.++-.++.
T Consensus 267 laQSyAKNMG-----LYgERvGa~svvc~ 290 (427)
T KOG1411|consen 267 LAQSYAKNMG-----LYGERVGALSVVCK 290 (427)
T ss_pred eehhhhhhcc-----hhhhccceeEEEec
Confidence 5555544333 36788888876663
No 375
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=39.33 E-value=1.1e+02 Score=26.08 Aligned_cols=70 Identities=14% Similarity=0.166 Sum_probs=51.9
Q ss_pred CCceEEEEccCCCchh--hHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhch-HHHHHHHHhCCCCCcEEEEE
Q 024065 8 EEKHFVLVHGVNHGAW--CWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYS-EPLMEVLASLPAEEKVILVG 84 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~--~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~-~~l~~~l~~~~~~~~~~lvG 84 (273)
+.|.||++-|+.+++. .-+.+...|..+||+|+++--| +-++.. .-+-.+..+++..+.+.++=
T Consensus 297 ~~~vlivfeG~DaAGKgg~I~rl~~~ldPrg~~v~~~~~P-------------t~~E~~~~~lwRf~~~lP~~G~i~iFd 363 (493)
T TIGR03708 297 KRSLVLVFEGWDAAGKGGAIRRVTEALDARQYRVVPIAAP-------------TDEEKAQHYLWRFWRHIPRRGRITIFD 363 (493)
T ss_pred CCCEEEEEEcccCCCCcHHHHHHHhhcCCCeeEEEeCCCc-------------CHHHHcCcHHHHHHHhCCCCCeEEEEc
Confidence 4789999999965554 3678899999999999998765 223333 34667888887778888888
Q ss_pred echhHH
Q 024065 85 HSLGGV 90 (273)
Q Consensus 85 ~S~Gg~ 90 (273)
-|+=+-
T Consensus 364 RSwY~~ 369 (493)
T TIGR03708 364 RSWYGR 369 (493)
T ss_pred CCccCC
Confidence 787443
No 376
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=39.32 E-value=28 Score=27.79 Aligned_cols=18 Identities=28% Similarity=0.231 Sum_probs=15.4
Q ss_pred EEEEechhHHHHHHHHHH
Q 024065 81 ILVGHSLGGVTLALAADK 98 (273)
Q Consensus 81 ~lvG~S~Gg~~a~~~a~~ 98 (273)
.+.|.|.||.+|..++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 467999999999999864
No 377
>PRK03363 fixB putative electron transfer flavoprotein FixB; Provisional
Probab=39.20 E-value=1.8e+02 Score=23.01 Aligned_cols=60 Identities=13% Similarity=0.222 Sum_probs=39.1
Q ss_pred HHHhhCCc-EEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEechhHH-HHHHHHHHC
Q 024065 30 ARLVAGGH-RVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGV-TLALAADKF 99 (273)
Q Consensus 30 ~~l~~~g~-~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg~-~a~~~a~~~ 99 (273)
+.+...|. +|+..|.+. .. ++.+.+++.+.++++.. ....++|+++|.=|. ++-.+|.+.
T Consensus 42 ~~~~~~Gad~V~~~~~~~--------~~-~~~e~~~~al~~~i~~~-~p~~~vl~~~T~~Gr~laprlAa~l 103 (313)
T PRK03363 42 AQAIQLGANHVWKLSGKP--------DD-RMIEDYAGVMADTIRQH-GADGLVLLPNTRRGKLLAAKLGYRL 103 (313)
T ss_pred HHHHhcCCCEEEEecCcc--------cc-cChHHHHHHHHHHHHhh-CCCcEEEEcCCccHHHHHHHHHHHh
Confidence 33444454 577766532 12 67788889999988876 433588888776554 777777654
No 378
>KOG3062 consensus RNA polymerase II elongator associated protein [General function prediction only]
Probab=39.18 E-value=1.7e+02 Score=22.08 Aligned_cols=38 Identities=21% Similarity=0.309 Sum_probs=27.8
Q ss_pred eEEEEccCCCchhhH--HHHHHHHhhCC--cEEEEeccCCCC
Q 024065 11 HFVLVHGVNHGAWCW--YKLKARLVAGG--HRVTAVDLAASG 48 (273)
Q Consensus 11 ~vv~lhG~~~~~~~~--~~~~~~l~~~g--~~vi~~d~~G~G 48 (273)
|+|++-|+++++..- ..+.+.|.++| +.|+.+|--..|
T Consensus 2 pLVvi~G~P~SGKstrA~~L~~~l~~~~~K~~v~ii~deslg 43 (281)
T KOG3062|consen 2 PLVVICGLPCSGKSTRAVELREALKERGTKQSVRIIDDESLG 43 (281)
T ss_pred CeEEEeCCCCCCchhHHHHHHHHHHhhcccceEEEechhhcC
Confidence 688889999888764 46778888776 467777755444
No 379
>TIGR00246 tRNA_RlmH_YbeA rRNA large subunit m3Psi methyltransferase RlmH. This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA.
Probab=39.12 E-value=63 Score=22.34 Aligned_cols=9 Identities=22% Similarity=0.545 Sum_probs=4.3
Q ss_pred EEEEeccCC
Q 024065 38 RVTAVDLAA 46 (273)
Q Consensus 38 ~vi~~d~~G 46 (273)
.|+++|-+|
T Consensus 67 ~~i~LDe~G 75 (153)
T TIGR00246 67 HVVTLDIPG 75 (153)
T ss_pred eEEEEcCCC
Confidence 345555444
No 380
>PRK14581 hmsF outer membrane N-deacetylase; Provisional
Probab=38.77 E-value=52 Score=29.11 Aligned_cols=77 Identities=16% Similarity=0.130 Sum_probs=47.6
Q ss_pred CCceEEEEccCCCc----------hhhHHHHHHHHhhCCcEEEEeccCC---CCCCCCCcC-CCcc----hhhchHHHHH
Q 024065 8 EEKHFVLVHGVNHG----------AWCWYKLKARLVAGGHRVTAVDLAA---SGINMKRIE-DVHT----FHAYSEPLME 69 (273)
Q Consensus 8 ~~~~vv~lhG~~~~----------~~~~~~~~~~l~~~g~~vi~~d~~G---~G~s~~~~~-~~~~----~~~~~~~l~~ 69 (273)
++.+|++-|..... ...|+..++.|.++||+++.++--= .|....+.. -..| ..+....+..
T Consensus 47 ~~~~VLmYH~V~d~~~~~~~~~Vspe~Fe~QL~~Lk~nGY~~VSL~el~~~~~g~~~LP~KaV~LTFDDGy~sny~~AlP 126 (672)
T PRK14581 47 NTFVVIAYHDVEDDSADQRYLSVRSSALNEQFVWLRDNGYHVVSVDQILAARNGGPTLPDKAVLLTFDDGYSSFYRRVYP 126 (672)
T ss_pred CceEEEEeCcccCCCCccCccccCHHHHHHHHHHHHHCcCEEecHHHHHHHHhcCCCCCCCeEEEEEEcCCcchHHHHHH
Confidence 46789999998543 2458889999999999999987321 122211111 1122 3345566778
Q ss_pred HHHhCCCCCc-EEEEEe
Q 024065 70 VLASLPAEEK-VILVGH 85 (273)
Q Consensus 70 ~l~~~~~~~~-~~lvG~ 85 (273)
+|++. +..- +.++|.
T Consensus 127 ILKky-g~pATfFvVg~ 142 (672)
T PRK14581 127 LLKAY-KWSAVLAPVGT 142 (672)
T ss_pred HHHHc-CCCEEEEEech
Confidence 88888 5543 445553
No 381
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=38.73 E-value=70 Score=25.45 Aligned_cols=35 Identities=23% Similarity=0.234 Sum_probs=25.2
Q ss_pred CceEEEEcc-CCCch-----hhHHHHHHHHhhCCcEEEEec
Q 024065 9 EKHFVLVHG-VNHGA-----WCWYKLKARLVAGGHRVTAVD 43 (273)
Q Consensus 9 ~~~vv~lhG-~~~~~-----~~~~~~~~~l~~~g~~vi~~d 43 (273)
+|.|++.|| ..+.. +.|..+++.|.++|+.|+.+-
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g 215 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFG 215 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEec
Confidence 578888888 33232 347889999999987777654
No 382
>PF14252 DUF4347: Domain of unknown function (DUF4347)
Probab=38.51 E-value=1.3e+02 Score=21.22 Aligned_cols=52 Identities=23% Similarity=0.231 Sum_probs=33.3
Q ss_pred hhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEechhH
Q 024065 22 AWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGG 89 (273)
Q Consensus 22 ~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg 89 (273)
-..++.+...+.. +..|+.+|.- .+-.+.|.+.+....+.+.+++++|.--|
T Consensus 9 v~d~~~L~~~l~~-~~~v~~ld~~---------------~d~~~qI~~~L~~~~~i~~lhivsHG~~G 60 (165)
T PF14252_consen 9 VEDYESLLAGLPP-GVEVVILDPS---------------RDGLEQIAQALAGYQNIDALHIVSHGSPG 60 (165)
T ss_pred CCCHHHHHhcCcC-CCEEEEEeCC---------------CchHHHHHHHHhcCCCCceEEEEcCCCcc
Confidence 3446667776654 5788888842 12245566666665467889999886544
No 383
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=38.38 E-value=75 Score=18.97 Aligned_cols=18 Identities=39% Similarity=0.506 Sum_probs=15.5
Q ss_pred HHHHHHHhhCCcEEEEec
Q 024065 26 YKLKARLVAGGHRVTAVD 43 (273)
Q Consensus 26 ~~~~~~l~~~g~~vi~~d 43 (273)
..++..|++.|++|..+|
T Consensus 17 ~~l~~~l~~~g~~v~~~~ 34 (99)
T cd01983 17 ANLAAALAKRGKRVLLID 34 (99)
T ss_pred HHHHHHHHHCCCeEEEEC
Confidence 577888888899999998
No 384
>PRK10751 molybdopterin-guanine dinucleotide biosynthesis protein B; Provisional
Probab=37.82 E-value=1.3e+02 Score=21.34 Aligned_cols=41 Identities=15% Similarity=0.074 Sum_probs=30.4
Q ss_pred CceEEEEccCCCchhh--HHHHHHHHhhCCcEEEEeccCCCCC
Q 024065 9 EKHFVLVHGVNHGAWC--WYKLKARLVAGGHRVTAVDLAASGI 49 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~d~~G~G~ 49 (273)
.++|+.+=|..++... -..++..|..+|++|-.+-..|||.
T Consensus 5 ~~~ii~ivG~sgsGKTTLi~~li~~l~~~g~~vg~Ik~~~~~~ 47 (173)
T PRK10751 5 MIPLLAIAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDM 47 (173)
T ss_pred CceEEEEECCCCChHHHHHHHHHHHHhhcCCeEEEEEEcCCCc
Confidence 5667777787666655 3788888988899888887766654
No 385
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=37.76 E-value=45 Score=23.41 Aligned_cols=23 Identities=30% Similarity=0.309 Sum_probs=17.9
Q ss_pred CCCcEEEEEechhHHHHHHHHHH
Q 024065 76 AEEKVILVGHSLGGVTLALAADK 98 (273)
Q Consensus 76 ~~~~~~lvG~S~Gg~~a~~~a~~ 98 (273)
....-.+.|-|.||.+|+.++..
T Consensus 25 ~~~~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 25 GERFDVISGTSAGALNAALLALG 47 (204)
T ss_dssp CCT-SEEEEECCHHHHHHHHHTC
T ss_pred CCCccEEEEcChhhhhHHHHHhC
Confidence 44566788999999999888765
No 386
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=37.72 E-value=80 Score=22.52 Aligned_cols=22 Identities=23% Similarity=0.424 Sum_probs=10.9
Q ss_pred HHHHHHHHhhCCcEEEEeccCCCC
Q 024065 25 WYKLKARLVAGGHRVTAVDLAASG 48 (273)
Q Consensus 25 ~~~~~~~l~~~g~~vi~~d~~G~G 48 (273)
|-.++.... |+.++.+=+-|.|
T Consensus 24 ~~~~~aR~l--~~~~iNLGfsG~~ 45 (178)
T PF14606_consen 24 YPAILARRL--GLDVINLGFSGNG 45 (178)
T ss_dssp HHHHHHHHH--T-EEEEEE-TCCC
T ss_pred HHHHHHHHc--CCCeEeeeecCcc
Confidence 655544433 5677776665543
No 387
>cd08770 DAP_dppA_3 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=37.64 E-value=1.4e+02 Score=22.91 Aligned_cols=53 Identities=13% Similarity=0.097 Sum_probs=35.1
Q ss_pred cceEEEEeecCCCCCCHHHHHHHHHhCCCceEEEEe-cCCccccccChHhHHHHHHHHHh
Q 024065 206 SVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIK-GGDHMAMLSDPQKLCDCLSQISL 264 (273)
Q Consensus 206 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~-~~gH~~~~~~~~~~~~~i~~fl~ 264 (273)
.+||+++.|++ ...++..+.+|+++.+.++ +-|.....-.|++..+.|.+=.+
T Consensus 147 gVPV~lvsGD~------~~~~ea~~~~P~~~tv~vK~~~g~aa~~~~p~~a~~~I~~~~~ 200 (263)
T cd08770 147 GVPVVFVSGDA------GLCAEAKELNPNIVTVPVKEGFGGATISIHPGLACKEIRKGVK 200 (263)
T ss_pred CCCEEEEecCH------HHHHHHHHhCCCceEEEeeeeeccccccCCHHHHHHHHHHHHH
Confidence 89999999965 2334445567998887777 33433334467777777776653
No 388
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=37.54 E-value=31 Score=26.72 Aligned_cols=20 Identities=20% Similarity=0.200 Sum_probs=16.8
Q ss_pred EEEEEechhHHHHHHHHHHC
Q 024065 80 VILVGHSLGGVTLALAADKF 99 (273)
Q Consensus 80 ~~lvG~S~Gg~~a~~~a~~~ 99 (273)
-.++|.|.||.+|+.++...
T Consensus 36 D~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 36 DLFAGTSAGSLIALGLALGY 55 (288)
T ss_pred eEEEEeCHHHHHHHHHHcCc
Confidence 35779999999999998654
No 389
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=37.49 E-value=2.1e+02 Score=23.73 Aligned_cols=66 Identities=21% Similarity=0.162 Sum_probs=44.8
Q ss_pred HHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEechhHHHHHHHHHHCCCccce
Q 024065 26 YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISV 105 (273)
Q Consensus 26 ~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~ 105 (273)
+..+..|.+.|.+|+++- | .+.+++-..+...++.. +.++-+++ .-||.+...+...+|+....
T Consensus 75 d~vaa~l~~~gi~v~a~~--~-----------~~~~~y~~~~~~~l~~~-~~~p~~i~--DdGg~~~~~~~~~~~~~~~~ 138 (413)
T cd00401 75 DHAAAAIAAAGIPVFAWK--G-----------ETLEEYWWCIEQALKFP-DGEPNMIL--DDGGDLTLLIHKKHPELLPG 138 (413)
T ss_pred HHHHHHHHhcCceEEEEc--C-----------CCHHHHHHHHHHHHhcc-CCCCcEEE--ecchHHHHHHHhhhhhhhhc
Confidence 345566666666666543 1 36677777888888876 44666666 88999888887777766555
Q ss_pred eE
Q 024065 106 AV 107 (273)
Q Consensus 106 li 107 (273)
++
T Consensus 139 ~~ 140 (413)
T cd00401 139 IR 140 (413)
T ss_pred cE
Confidence 54
No 390
>PLN02496 probable phosphopantothenoylcysteine decarboxylase
Probab=37.32 E-value=1.7e+02 Score=21.59 Aligned_cols=61 Identities=11% Similarity=0.062 Sum_probs=34.9
Q ss_pred CceEEEEccCCCchhhH-----HHHHHHHhhCCcEEEEeccC--CCCCCCCCcCCCcchhhchHHHHHHHHh
Q 024065 9 EKHFVLVHGVNHGAWCW-----YKLKARLVAGGHRVTAVDLA--ASGINMKRIEDVHTFHAYSEPLMEVLAS 73 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~-----~~~~~~l~~~g~~vi~~d~~--G~G~s~~~~~~~~~~~~~~~~l~~~l~~ 73 (273)
+.++++.+.. +..+| +.-.+.|.+.|+.|+-+..- .+|.. ..+....+++....+..++..
T Consensus 132 ~~Pv~iaPaM--N~~Mw~~Pat~~nl~~L~~~G~~vi~P~~g~lAcg~~--G~Grm~ep~~I~~~i~~~l~~ 199 (209)
T PLN02496 132 SKPLFVAPAM--NTFMWNNPFTERHLMSIDELGISLIPPVTKRLACGDY--GNGAMAEPSLIYSTVRLFLES 199 (209)
T ss_pred CCCEEEEeCC--CHHHHhCHHHHHHHHHHHHCCCEEECCCcCcccCCCc--CCCCCCCHHHHHHHHHHHHhh
Confidence 4577777764 45555 44566788889988766421 12322 122334666666666665544
No 391
>PF04763 DUF562: Protein of unknown function (DUF562); InterPro: IPR006850 This represents a conserved region found in a number of Chlamydophila pneumoniae proteins.
Probab=37.12 E-value=1.2e+02 Score=20.47 Aligned_cols=38 Identities=13% Similarity=-0.020 Sum_probs=27.6
Q ss_pred CceEEEEccCCCc----hhhHHHHHHHHhhCCc---EEEEeccCC
Q 024065 9 EKHFVLVHGVNHG----AWCWYKLKARLVAGGH---RVTAVDLAA 46 (273)
Q Consensus 9 ~~~vv~lhG~~~~----~~~~~~~~~~l~~~g~---~vi~~d~~G 46 (273)
.-.||+.|+.+.. ...+..+...|...|| +|+.++..+
T Consensus 17 ~vvVv~~~~~~~~~~l~~~s~~~l~~eL~~~GYSylNIfs~~~~~ 61 (146)
T PF04763_consen 17 NVVVVCNHSWPGPESLPPESVSLLIEELEESGYSYLNIFSCSSES 61 (146)
T ss_pred cEEEEEeCCcccccCCChHHHHHHHHHHhhcCCceEEEEEEcCCC
Confidence 4567788887643 3457888999999887 577777654
No 392
>PF14488 DUF4434: Domain of unknown function (DUF4434)
Probab=37.11 E-value=1.5e+02 Score=20.87 Aligned_cols=55 Identities=9% Similarity=-0.058 Sum_probs=35.5
Q ss_pred CchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCC------CcchhhchHHHHHHHHhC
Q 024065 20 HGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIED------VHTFHAYSEPLMEVLASL 74 (273)
Q Consensus 20 ~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~------~~~~~~~~~~l~~~l~~~ 74 (273)
-+...|+.....+.+.|.+.+.+-.-|++....-+.. .....+.++.+.+..+..
T Consensus 17 ~~~~~W~~~~~~m~~~GidtlIlq~~~~~~~~~yps~~~~~~~~~~~~d~l~~~L~~A~~~ 77 (166)
T PF14488_consen 17 WTPAQWREEFRAMKAIGIDTLILQWTGYGGFAFYPSKLSPGGFYMPPVDLLEMILDAADKY 77 (166)
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEEEeecCCcccCCccccCccccCCcccHHHHHHHHHHHc
Confidence 3456799999999999999888777776655422221 113345555555555655
No 393
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=36.82 E-value=1.9e+02 Score=22.05 Aligned_cols=40 Identities=10% Similarity=0.004 Sum_probs=31.3
Q ss_pred CCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCC
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAAS 47 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~ 47 (273)
.+.||++--|...+.+.|...++.+.+.|-.=+.+=.||.
T Consensus 121 tgkPVilk~G~~~t~~e~~~A~e~i~~~Gn~~i~L~eRg~ 160 (250)
T PRK13397 121 IDKPILFKRGLMATIEEYLGALSYLQDTGKSNIILCERGV 160 (250)
T ss_pred cCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEcccc
Confidence 4779999999999999999999999887764344444554
No 394
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=36.39 E-value=31 Score=27.01 Aligned_cols=17 Identities=24% Similarity=0.243 Sum_probs=14.9
Q ss_pred EEEEechhHHHHHHHHH
Q 024065 81 ILVGHSLGGVTLALAAD 97 (273)
Q Consensus 81 ~lvG~S~Gg~~a~~~a~ 97 (273)
.++|.|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 47799999999999875
No 395
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=36.34 E-value=60 Score=24.50 Aligned_cols=23 Identities=30% Similarity=0.394 Sum_probs=17.9
Q ss_pred EEEEEechhHHHHHHHHHHCCCcc
Q 024065 80 VILVGHSLGGVTLALAADKFPHKI 103 (273)
Q Consensus 80 ~~lvG~S~Gg~~a~~~a~~~p~~v 103 (273)
-.+.|.|.|+.+|..++. .|+++
T Consensus 33 ~~i~GtSaGAl~aa~~a~-~~~~~ 55 (246)
T cd07222 33 KRFAGASAGSLVAAVLLT-APEKI 55 (246)
T ss_pred CEEEEECHHHHHHHHHhc-ChHHH
Confidence 378999999999999984 34433
No 396
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=36.14 E-value=56 Score=24.12 Aligned_cols=15 Identities=40% Similarity=0.579 Sum_probs=12.2
Q ss_pred HHHhhCCcEEEEecc
Q 024065 30 ARLVAGGHRVTAVDL 44 (273)
Q Consensus 30 ~~l~~~g~~vi~~d~ 44 (273)
..|+++|+.|+++|.
T Consensus 53 ~~LA~~G~~V~avD~ 67 (218)
T PRK13255 53 LWLAEQGHEVLGVEL 67 (218)
T ss_pred HHHHhCCCeEEEEcc
Confidence 346678999999996
No 397
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=36.01 E-value=97 Score=22.78 Aligned_cols=26 Identities=23% Similarity=0.288 Sum_probs=17.0
Q ss_pred hHHHHHHHHhCCCCCcEEEEEechhHH
Q 024065 64 SEPLMEVLASLPAEEKVILVGHSLGGV 90 (273)
Q Consensus 64 ~~~l~~~l~~~~~~~~~~lvG~S~Gg~ 90 (273)
.+.+...++.. +.-..+++-||+||.
T Consensus 111 ~~~ir~~~e~~-d~~~~~~i~~slgGG 136 (216)
T PF00091_consen 111 LEQIRKEIEKC-DSLDGFFIVHSLGGG 136 (216)
T ss_dssp HHHHHHHHHTS-TTESEEEEEEESSSS
T ss_pred ccccchhhccc-cccccceecccccce
Confidence 44455555555 556778888888876
No 398
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=35.93 E-value=77 Score=18.49 Aligned_cols=10 Identities=50% Similarity=0.707 Sum_probs=6.6
Q ss_pred ceEEEEccCC
Q 024065 10 KHFVLVHGVN 19 (273)
Q Consensus 10 ~~vv~lhG~~ 19 (273)
|.++++||..
T Consensus 32 ~~~~lvhGga 41 (71)
T PF10686_consen 32 PDMVLVHGGA 41 (71)
T ss_pred CCEEEEECCC
Confidence 5566777755
No 399
>cd08663 DAP_dppA_1 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=35.82 E-value=1.7e+02 Score=22.58 Aligned_cols=53 Identities=13% Similarity=0.029 Sum_probs=34.9
Q ss_pred cceEEEEeecCCCCCCHHHHHHHHHhCCCceEEEEe-cCCc-cccccChHhHHHHHHHHHh
Q 024065 206 SVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIK-GGDH-MAMLSDPQKLCDCLSQISL 264 (273)
Q Consensus 206 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~-~~gH-~~~~~~~~~~~~~i~~fl~ 264 (273)
.+||+++.|++ ...++..+..|+++.+.++ +.|. ....-.|++..+.|.+=.+
T Consensus 147 gVPV~lVsGDd------~~~~ea~~~~p~i~tv~vK~~~gr~aa~~~~p~~a~~~I~~~a~ 201 (266)
T cd08663 147 GVPVVLVTGDD------AACAEARELGPGVETVAVKEAIGRFAARCLPPAEARALIREAAA 201 (266)
T ss_pred CCCEEEEecCH------HHHHHHHhhCCCcEEEEEecccCCCccccCCHHHHHHHHHHHHH
Confidence 89999999964 2334445567998888777 3453 3334466777777766553
No 400
>PF03358 FMN_red: NADPH-dependent FMN reductase; InterPro: IPR005025 NADPH-dependent FMN reductase (1.5.1.29 from EC) reduces FMN and also reduces riboflavin and FAD, although more slowly. Members of this entry catalyse the reaction NAD(P)H + FMN = NAD(P)(+) + FMNH(2).; PDB: 3SVL_B 3GFS_F 3GFQ_A 1NNI_1 2GSW_B 3GFR_D 1T0I_B 3D7N_A 2R97_A 3B6K_A ....
Probab=35.78 E-value=36 Score=23.11 Aligned_cols=36 Identities=19% Similarity=0.292 Sum_probs=24.6
Q ss_pred EEEEccCC---Cchhh-HHHHHHHHhhCCcEEEEeccCCC
Q 024065 12 FVLVHGVN---HGAWC-WYKLKARLVAGGHRVTAVDLAAS 47 (273)
Q Consensus 12 vv~lhG~~---~~~~~-~~~~~~~l~~~g~~vi~~d~~G~ 47 (273)
|+++.|.. ++... .+.+.+.+.+.|+.+-.+|+..+
T Consensus 3 ilii~gS~r~~~~t~~l~~~~~~~l~~~g~e~~~i~l~~~ 42 (152)
T PF03358_consen 3 ILIINGSPRKNSNTRKLAEAVAEQLEEAGAEVEVIDLADY 42 (152)
T ss_dssp EEEEESSSSTTSHHHHHHHHHHHHHHHTTEEEEEEECTTS
T ss_pred EEEEECcCCCCCHHHHHHHHHHHHHHHcCCEEEEEecccc
Confidence 66777765 22222 35667777777899999998754
No 401
>TIGR00067 glut_race glutamate racemase. The most closely related proteins differing in function are aspartate racemases.
Probab=35.78 E-value=1.1e+02 Score=23.25 Aligned_cols=45 Identities=2% Similarity=-0.005 Sum_probs=34.4
Q ss_pred HHHHHHHHHhCCCceEEEEecCCccccccCh-HhHHHHHHHHHhcc
Q 024065 222 KQFQHWMIQNYPVNEVMEIKGGDHMAMLSDP-QKLCDCLSQISLNR 266 (273)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~-~~~~~~i~~fl~~~ 266 (273)
....+.+.+.+|+.+++.+-+..|+|+=+++ +++.+.+.+.++..
T Consensus 11 ltv~~~l~~~~p~~~~iy~~D~~~~PYG~ks~~~i~~~~~~~~~~L 56 (251)
T TIGR00067 11 LSVLKEIRKQLPKEHYIYVGDTKRFPYGEKSPEFILEYVLELLTFL 56 (251)
T ss_pred HHHHHHHHHHCCCCCEEEEecCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 4567888999999999999999999998876 55665555444433
No 402
>PRK11460 putative hydrolase; Provisional
Probab=35.73 E-value=1.2e+02 Score=22.60 Aligned_cols=39 Identities=18% Similarity=0.102 Sum_probs=25.3
Q ss_pred CceEEEEccCCCchhhH---HHHHHHHhhCCcEEEEeccCCC
Q 024065 9 EKHFVLVHGVNHGAWCW---YKLKARLVAGGHRVTAVDLAAS 47 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~---~~~~~~l~~~g~~vi~~d~~G~ 47 (273)
.++|+++||-....-.+ ..+.+.|.+.|..+-...++|-
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~ 189 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDL 189 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCC
Confidence 67899999987664433 4566677776766555555543
No 403
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=35.69 E-value=45 Score=26.24 Aligned_cols=22 Identities=32% Similarity=0.388 Sum_probs=18.2
Q ss_pred CCCcEEEEEechhHHHHHHHHH
Q 024065 76 AEEKVILVGHSLGGVTLALAAD 97 (273)
Q Consensus 76 ~~~~~~lvG~S~Gg~~a~~~a~ 97 (273)
+.++.++.|||+|=..|+..+.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 4678899999999888877664
No 404
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=35.52 E-value=47 Score=24.49 Aligned_cols=34 Identities=15% Similarity=0.193 Sum_probs=26.7
Q ss_pred eEEEEccCCCchhh-H-HHHHHHHhhCCcEEEEecc
Q 024065 11 HFVLVHGVNHGAWC-W-YKLKARLVAGGHRVTAVDL 44 (273)
Q Consensus 11 ~vv~lhG~~~~~~~-~-~~~~~~l~~~g~~vi~~d~ 44 (273)
++|++-|+++++.. + ..+++.|.+.+++|+...-
T Consensus 2 pLiIlTGyPgsGKTtfakeLak~L~~~i~~vi~l~k 37 (261)
T COG4088 2 PLIILTGYPGSGKTTFAKELAKELRQEIWRVIHLEK 37 (261)
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHhhhhccccch
Confidence 67889999877755 4 5788999998888877653
No 405
>PRK00889 adenylylsulfate kinase; Provisional
Probab=35.47 E-value=1.1e+02 Score=21.31 Aligned_cols=36 Identities=19% Similarity=0.136 Sum_probs=24.7
Q ss_pred CceEEEEccCCCchhh--HHHHHHHHhhCCcEEEEecc
Q 024065 9 EKHFVLVHGVNHGAWC--WYKLKARLVAGGHRVTAVDL 44 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~d~ 44 (273)
.+.++.+.|.++++.. -+.+...|...|..+..+|-
T Consensus 3 ~g~~i~~~G~~GsGKST~a~~la~~l~~~g~~v~~id~ 40 (175)
T PRK00889 3 RGVTVWFTGLSGAGKTTIARALAEKLREAGYPVEVLDG 40 (175)
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEcC
Confidence 3457888898766655 35667777767777877753
No 406
>PF09664 DUF2399: Protein of unknown function C-terminus (DUF2399); InterPro: IPR024465 This domain is found in archaeal, bacterial and eukaryotic proteins. Its function is unknown.
Probab=35.42 E-value=88 Score=21.60 Aligned_cols=33 Identities=27% Similarity=0.246 Sum_probs=23.2
Q ss_pred CCCceEEEEccCCCchhhHHHHHHHHhhCCcEEEE
Q 024065 7 MEEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTA 41 (273)
Q Consensus 7 ~~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~ 41 (273)
...+++||.+|.+... +..+.+.|.+.|.+++.
T Consensus 39 ~~~~pLVCt~G~p~~A--~~~LL~~L~~~g~~l~y 71 (152)
T PF09664_consen 39 ASCPPLVCTSGQPSAA--ARRLLDRLAAAGARLYY 71 (152)
T ss_pred CCCCeEEEcCCcHHHH--HHHHHHHHHhCCCEEEE
Confidence 3578899998876433 45778888887765543
No 407
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=35.37 E-value=1.2e+02 Score=22.76 Aligned_cols=69 Identities=14% Similarity=0.136 Sum_probs=31.3
Q ss_pred HHHHHHHhhCCcE-EEEeccCCCCCCCCCcC-------CCcchhhchHHHHHHHHhCCCCCcEEEEEechhHHHHHHHH
Q 024065 26 YKLKARLVAGGHR-VTAVDLAASGINMKRIE-------DVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAA 96 (273)
Q Consensus 26 ~~~~~~l~~~g~~-vi~~d~~G~G~s~~~~~-------~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a 96 (273)
..++...+++ .. +++.-.--+|.|..... ...++..+..|+.+-+... +.++++++..--|-.-++..+
T Consensus 43 ~~~a~~~a~~-~~~~lv~P~i~yG~s~~h~~fpGTisl~~~t~~~~l~di~~sl~~~-Gf~~ivivngHgGN~~~l~~~ 119 (237)
T PF02633_consen 43 EAVAERAAER-LGEALVLPPIPYGCSPHHMGFPGTISLSPETLIALLRDILRSLARH-GFRRIVIVNGHGGNIAALEAA 119 (237)
T ss_dssp HHHHHHHHHH-HTHEEE---B--BB-GCCTTSTT-BBB-HHHHHHHHHHHHHHHHHH-T--EEEEEESSTTHHHHHHHH
T ss_pred HHHHHHHHHH-CCcEEEeCCCccccCcccCCCCCeEEeCHHHHHHHHHHHHHHHHHc-CCCEEEEEECCHhHHHHHHHH
Confidence 4555555554 33 44333333565543221 1124556666666666666 889988885444433244433
No 408
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=35.32 E-value=48 Score=21.60 Aligned_cols=22 Identities=27% Similarity=0.456 Sum_probs=18.9
Q ss_pred hHHHHHHHHhhCCcEEEEeccC
Q 024065 24 CWYKLKARLVAGGHRVTAVDLA 45 (273)
Q Consensus 24 ~~~~~~~~l~~~g~~vi~~d~~ 45 (273)
.+..++..|+++|+.|++.|.-
T Consensus 24 ~~~~VA~~L~e~g~dv~atDI~ 45 (129)
T COG1255 24 FFLDVAKRLAERGFDVLATDIN 45 (129)
T ss_pred hHHHHHHHHHHcCCcEEEEecc
Confidence 3667889999999999999964
No 409
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=35.24 E-value=40 Score=17.93 Aligned_cols=26 Identities=12% Similarity=0.244 Sum_probs=22.3
Q ss_pred cchhhchHHHHHHHHhCCCCCcEEEEE
Q 024065 58 HTFHAYSEPLMEVLASLPAEEKVILVG 84 (273)
Q Consensus 58 ~~~~~~~~~l~~~l~~~~~~~~~~lvG 84 (273)
.+.+.+..|+...|..+ .+..+.++|
T Consensus 6 w~PqSWM~DLrS~I~~~-~I~ql~ipG 31 (51)
T PF03490_consen 6 WHPQSWMSDLRSSIGEM-AITQLFIPG 31 (51)
T ss_pred cCcHHHHHHHHHHHhcc-eeeeEEecc
Confidence 46788899999999999 888888887
No 410
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=35.11 E-value=2e+02 Score=22.65 Aligned_cols=32 Identities=22% Similarity=0.268 Sum_probs=21.3
Q ss_pred EEEccCCCchhh--HHHHHHHHhhCCcEEEEecc
Q 024065 13 VLVHGVNHGAWC--WYKLKARLVAGGHRVTAVDL 44 (273)
Q Consensus 13 v~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~d~ 44 (273)
+|+++.+.+... -..++..|.++|+.|..+-.
T Consensus 2 ~~~~~~~~gG~~~~~~~la~~l~~~G~ev~v~~~ 35 (350)
T cd03785 2 ILIAGGGTGGHIFPALALAEELRERGAEVLFLGT 35 (350)
T ss_pred EEEEecCchhhhhHHHHHHHHHHhCCCEEEEEEC
Confidence 455555444433 34788999999999977643
No 411
>PRK07933 thymidylate kinase; Validated
Probab=34.95 E-value=1.3e+02 Score=22.14 Aligned_cols=39 Identities=23% Similarity=0.317 Sum_probs=27.7
Q ss_pred EEEEccCCCchhh--HHHHHHHHhhCCcEEEEeccCCCCCC
Q 024065 12 FVLVHGVNHGAWC--WYKLKARLVAGGHRVTAVDLAASGIN 50 (273)
Q Consensus 12 vv~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~d~~G~G~s 50 (273)
+|.+=|.-+++.. -..+.+.|..+|+.|+....|++|.+
T Consensus 2 ~IviEG~dGsGKST~~~~L~~~L~~~g~~v~~~~~P~~~~~ 42 (213)
T PRK07933 2 LIAIEGVDGAGKRTLTEALRAALEARGRSVATLAFPRYGRS 42 (213)
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 3445565444333 56888899999999999999977644
No 412
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=34.93 E-value=2.7e+02 Score=23.29 Aligned_cols=72 Identities=19% Similarity=0.180 Sum_probs=41.1
Q ss_pred HHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEechhHHHHHHHHHHCCC--ccce
Q 024065 28 LKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPH--KISV 105 (273)
Q Consensus 28 ~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~--~v~~ 105 (273)
....+...+|.++.+|-+|.... -+.+.+.+..+.+.+ ....+++|--++-|.-+...|..+-+ .+.+
T Consensus 174 al~~~~~~~~DvVIIDTaGr~~~---------d~~l~~eL~~i~~~~-~p~e~lLVvda~tgq~~~~~a~~f~~~v~i~g 243 (428)
T TIGR00959 174 ALEYAKENGFDVVIVDTAGRLQI---------DEELMEELAAIKEIL-NPDEILLVVDAMTGQDAVNTAKTFNERLGLTG 243 (428)
T ss_pred HHHHHHhcCCCEEEEeCCCcccc---------CHHHHHHHHHHHHhh-CCceEEEEEeccchHHHHHHHHHHHhhCCCCE
Confidence 33444456799999999885322 133445555555555 44566666555555555555554432 4666
Q ss_pred eEEe
Q 024065 106 AVFV 109 (273)
Q Consensus 106 lil~ 109 (273)
+|+.
T Consensus 244 iIlT 247 (428)
T TIGR00959 244 VVLT 247 (428)
T ss_pred EEEe
Confidence 6644
No 413
>KOG0736 consensus Peroxisome assembly factor 2 containing the AAA+-type ATPase domain [Posttranslational modification, protein turnover, chaperones]
Probab=34.77 E-value=2.8e+02 Score=25.42 Aligned_cols=72 Identities=17% Similarity=0.110 Sum_probs=46.0
Q ss_pred cEEEEec-----cCCCCCCCCCcCCCcchhhchHHHHHHHHhCC--CCCcEEEEEechhHHHHHHHHHHCCCccceeEEe
Q 024065 37 HRVTAVD-----LAASGINMKRIEDVHTFHAYSEPLMEVLASLP--AEEKVILVGHSLGGVTLALAADKFPHKISVAVFV 109 (273)
Q Consensus 37 ~~vi~~d-----~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~ 109 (273)
=.||.+| -|..|.|...- --++..+..+.+-++.+. ..++++++|-+-=--+ +.=|..+|.|+++++.+
T Consensus 765 PCVIFFDELDSlAP~RG~sGDSG---GVMDRVVSQLLAELDgls~~~s~~VFViGATNRPDL-LDpALLRPGRFDKLvyv 840 (953)
T KOG0736|consen 765 PCVIFFDELDSLAPNRGRSGDSG---GVMDRVVSQLLAELDGLSDSSSQDVFVIGATNRPDL-LDPALLRPGRFDKLVYV 840 (953)
T ss_pred CeEEEeccccccCccCCCCCCcc---ccHHHHHHHHHHHhhcccCCCCCceEEEecCCCccc-cChhhcCCCccceeEEe
Confidence 4677777 33444443221 257788888888888882 4567888885432211 22244678899999999
Q ss_pred ecc
Q 024065 110 TAF 112 (273)
Q Consensus 110 ~~~ 112 (273)
++.
T Consensus 841 G~~ 843 (953)
T KOG0736|consen 841 GPN 843 (953)
T ss_pred cCC
Confidence 874
No 414
>PRK14483 DhaKLM operon coactivator DhaQ; Provisional
Probab=34.64 E-value=1.1e+02 Score=24.25 Aligned_cols=35 Identities=17% Similarity=0.295 Sum_probs=27.4
Q ss_pred CCceEEEEccCCCchhh-----HHHHHHHHhhCCcEEEEe
Q 024065 8 EEKHFVLVHGVNHGAWC-----WYKLKARLVAGGHRVTAV 42 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~-----~~~~~~~l~~~g~~vi~~ 42 (273)
+...+|++.|+|+++.. ++.+.+.|.++|..|...
T Consensus 251 gd~v~vlVN~LG~ts~~El~i~~~~v~~~L~~~gi~v~r~ 290 (329)
T PRK14483 251 GDNFILLINGLGATTLMEQYIFANDIRRLLELEGLQITFV 290 (329)
T ss_pred CCeEEEEEeCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEe
Confidence 46799999999988865 577888898888775543
No 415
>TIGR02362 dhaK1b probable dihydroxyacetone kinase DhaK1b subunit. Two types of dihydroxyacetone kinase (glycerone kinase) are described. In yeast and a few bacteria, e.g. Citrobacter freundii, the enzyme is a single chain that uses ATP as phosphoryl donor and is designated EC 2.7.1.29. By contract, E. coli and many other bacterial species have a multisubunit form with a phosphoprotein donor related to PTS transport proteins. This family represents a protein, unique to the Firmicutes (low GC Gram-positives), that appears to be a divergent second copy of the K subunit of that complex; its gene is always found in operons with the other three proteins of the complex.
Probab=34.62 E-value=1.1e+02 Score=24.25 Aligned_cols=35 Identities=11% Similarity=0.042 Sum_probs=27.4
Q ss_pred CCCceEEEEccCCCchhh-----HHHHHHHHhhCCcEEEE
Q 024065 7 MEEKHFVLVHGVNHGAWC-----WYKLKARLVAGGHRVTA 41 (273)
Q Consensus 7 ~~~~~vv~lhG~~~~~~~-----~~~~~~~l~~~g~~vi~ 41 (273)
.+...+|++.|+|+++.. ++.+.+.|.++|..|..
T Consensus 247 ~gd~v~vlvN~LG~t~~lEl~i~~~~v~~~L~~~gi~v~r 286 (326)
T TIGR02362 247 ADDHYAVLVNNLGGTTPMEQMVFNNDVHELLALEALHLPF 286 (326)
T ss_pred CCCEEEEEecCCCCCCHHHHHHHHHHHHHHHHHCCCEEEE
Confidence 346799999999988865 57888889888876543
No 416
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=34.38 E-value=72 Score=25.04 Aligned_cols=30 Identities=17% Similarity=0.194 Sum_probs=21.1
Q ss_pred CCCceEEEEccCCCchhhH--HHHHHHHhhCC
Q 024065 7 MEEKHFVLVHGVNHGAWCW--YKLKARLVAGG 36 (273)
Q Consensus 7 ~~~~~vv~lhG~~~~~~~~--~~~~~~l~~~g 36 (273)
..+|.++=+||+.+++..| +-+++.+-..|
T Consensus 107 p~KPLvLSfHG~tGTGKN~Va~iiA~n~~~~G 138 (344)
T KOG2170|consen 107 PRKPLVLSFHGWTGTGKNYVAEIIAENLYRGG 138 (344)
T ss_pred CCCCeEEEecCCCCCchhHHHHHHHHHHHhcc
Confidence 4588899999999998877 34455554433
No 417
>PRK13529 malate dehydrogenase; Provisional
Probab=33.97 E-value=2e+02 Score=24.97 Aligned_cols=80 Identities=19% Similarity=0.125 Sum_probs=45.2
Q ss_pred EEEEccCCCchhh-HHHHHHHHhhCCc-------EEEEeccCCCCCCCCCcCCCcchhhc---------------hHHHH
Q 024065 12 FVLVHGVNHGAWC-WYKLKARLVAGGH-------RVTAVDLAASGINMKRIEDVHTFHAY---------------SEPLM 68 (273)
Q Consensus 12 vv~lhG~~~~~~~-~~~~~~~l~~~g~-------~vi~~d~~G~G~s~~~~~~~~~~~~~---------------~~~l~ 68 (273)
-+++.|.|+..-. -+.+...+.+.|. +++.+|..|-=..+...-. ..-..+ ..++.
T Consensus 297 riv~~GAGsAgiGia~ll~~~~~~~Gl~~eeA~~~i~~vD~~GLl~~~r~~l~-~~k~~fa~~~~~~~~~~~~~~~~~L~ 375 (563)
T PRK13529 297 RIVFLGAGSAGCGIADQIVAAMVREGLSEEEARKRFFMVDRQGLLTDDMPDLL-DFQKPYARKREELADWDTEGDVISLL 375 (563)
T ss_pred EEEEECCCHHHHHHHHHHHHHHHHcCCChhHhcCeEEEEcCCCeEeCCCCcch-HHHHHHhhhcccccccccccCCCCHH
Confidence 3455566654433 4555666666676 8999999884333322100 000111 12466
Q ss_pred HHHHhCCCCCcEEEEEech-hHHHHHHH
Q 024065 69 EVLASLPAEEKVILVGHSL-GGVTLALA 95 (273)
Q Consensus 69 ~~l~~~~~~~~~~lvG~S~-Gg~~a~~~ 95 (273)
++++.. ++-+|+|-|- ||.+.-..
T Consensus 376 e~v~~~---kPtvLIG~S~~~g~Ft~ev 400 (563)
T PRK13529 376 EVVRNV---KPTVLIGVSGQPGAFTEEI 400 (563)
T ss_pred HHHhcc---CCCEEEEecCCCCCCCHHH
Confidence 666655 8899999998 66544433
No 418
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=33.44 E-value=2.9e+02 Score=23.11 Aligned_cols=76 Identities=13% Similarity=0.149 Sum_probs=43.9
Q ss_pred hHHHHHHHHhh-CCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEE-EechhHHHHHHHHHHCC-
Q 024065 24 CWYKLKARLVA-GGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILV-GHSLGGVTLALAADKFP- 100 (273)
Q Consensus 24 ~~~~~~~~l~~-~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lv-G~S~Gg~~a~~~a~~~p- 100 (273)
.+...+..+.+ +++.++.+|-+|... .-....+.+.++++.. ....++|| .-++++.-+...+..+.
T Consensus 307 ~L~~aL~~lk~~~~~DvVLIDTaGRs~---------kd~~lm~EL~~~lk~~-~PdevlLVLsATtk~~d~~~i~~~F~~ 376 (436)
T PRK11889 307 AMTRALTYFKEEARVDYILIDTAGKNY---------RASETVEEMIETMGQV-EPDYICLTLSASMKSKDMIEIITNFKD 376 (436)
T ss_pred HHHHHHHHHHhccCCCEEEEeCccccC---------cCHHHHHHHHHHHhhc-CCCeEEEEECCccChHHHHHHHHHhcC
Confidence 34444445543 368999999887522 1134455566777665 44455555 33456666666666654
Q ss_pred CccceeEEe
Q 024065 101 HKISVAVFV 109 (273)
Q Consensus 101 ~~v~~lil~ 109 (273)
-.++++|+-
T Consensus 377 ~~idglI~T 385 (436)
T PRK11889 377 IHIDGIVFT 385 (436)
T ss_pred CCCCEEEEE
Confidence 356777754
No 419
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=33.43 E-value=67 Score=25.47 Aligned_cols=32 Identities=25% Similarity=0.289 Sum_probs=24.6
Q ss_pred CceEEEEccCCCchhhHHHHHHHHhhCCcEEEEe
Q 024065 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAV 42 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~ 42 (273)
+...||+-|..+-...| ++..|.++||.|.+-
T Consensus 5 ~~~~VcVTGAsGfIgsw--ivk~LL~rGY~V~gt 36 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSW--IVKLLLSRGYTVRGT 36 (327)
T ss_pred CCcEEEEeCCchHHHHH--HHHHHHhCCCEEEEE
Confidence 34578888887766666 788888999998764
No 420
>TIGR00176 mobB molybdopterin-guanine dinucleotide biosynthesis protein MobB. This molybdenum cofactor biosynthesis enzyme is similar to the urease accessory protein UreG and to the hydrogenase accessory protein HypB, both GTP hydrolases involved in loading nickel into the metallocenters of their respective target enzymes.
Probab=33.35 E-value=1.1e+02 Score=21.16 Aligned_cols=36 Identities=19% Similarity=0.209 Sum_probs=25.6
Q ss_pred EEEccCCCchhh--HHHHHHHHhhCCcEEEEeccCCCC
Q 024065 13 VLVHGVNHGAWC--WYKLKARLVAGGHRVTAVDLAASG 48 (273)
Q Consensus 13 v~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~d~~G~G 48 (273)
+.+-|..++... -..++..|.++|++|.++..-+|+
T Consensus 2 i~i~G~~gsGKTtl~~~l~~~l~~~G~~V~viK~~~~~ 39 (155)
T TIGR00176 2 LQIVGPKNSGKTTLIERLVKALKARGYRVATIKHDHHD 39 (155)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEeccccc
Confidence 445566555544 368888888889999999876554
No 421
>TIGR02113 coaC_strep phosphopantothenoylcysteine decarboxylase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the N-terminal region of TIGR00521, corresponding to phosphopantothenoylcysteine decarboxylase activity.
Probab=33.09 E-value=1.6e+02 Score=20.99 Aligned_cols=34 Identities=9% Similarity=-0.043 Sum_probs=23.4
Q ss_pred CceEEEEccCCCchhhH-----HHHHHHHhhCCcEEEEecc
Q 024065 9 EKHFVLVHGVNHGAWCW-----YKLKARLVAGGHRVTAVDL 44 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~-----~~~~~~l~~~g~~vi~~d~ 44 (273)
+.+|++.+.. +..+| +.-.+.|.+.|+.|+-++.
T Consensus 112 ~~pv~i~PaM--n~~M~~~p~~~~nl~~L~~~G~~vi~P~~ 150 (177)
T TIGR02113 112 ETPKLIAPAM--NTKMYQNPITQRNIKILKKIGYQEIQPKE 150 (177)
T ss_pred CCCEEEEeCC--CHHHhCCHHHHHHHHHHHHCCCEEECCCc
Confidence 5577777753 34444 5667788888998887764
No 422
>COG3621 Patatin [General function prediction only]
Probab=33.02 E-value=91 Score=24.76 Aligned_cols=52 Identities=19% Similarity=0.163 Sum_probs=33.0
Q ss_pred cEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCC---CCcEEEE-EechhHHHHHHHHHHCC
Q 024065 37 HRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPA---EEKVILV-GHSLGGVTLALAADKFP 100 (273)
Q Consensus 37 ~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~~~lv-G~S~Gg~~a~~~a~~~p 100 (273)
|++..+|=-| ....+...+...++++.+ .+.+.++ |.|.||.+++.+|...+
T Consensus 9 ~rIlsldGGG------------vrG~i~lE~lr~ieqiqGkkl~e~FDl~~GTSiGgilal~La~~ks 64 (394)
T COG3621 9 YRILSLDGGG------------VRGAILLEKLRIIEQIQGKKLCEYFDLIGGTSIGGILALGLALGKS 64 (394)
T ss_pred eeEEEecCCc------------cccHHHHHHHHHHHHHhCCcceeeEeeecCccHHHHHHHHHhcCCC
Confidence 7888888433 112445556666666512 1234555 89999999999886544
No 423
>PF01012 ETF: Electron transfer flavoprotein domain; InterPro: IPR014730 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems. They can be functionally classified into constitutive, "housekeeping" ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II) []. ETFs are heterodimeric proteins composed of an alpha and beta subunit, and contain an FAD cofactor and AMP [, , , , ]. ETF consists of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain III is formed by the beta subunit. Domains I and III share an almost identical alpha-beta-alpha sandwich fold, while domain II forms an alpha-beta-alpha sandwich similar to that of bacterial flavodoxins. FAD is bound in a cleft between domains II and III, while domain III binds the AMP molecule. Interactions between domains I and III stabilise the protein, forming a shallow bowl where domain II resides. This entry represents the N-terminal domain of both the alpha and beta subunits from Group I and Group II ETFs.; PDB: 1EFP_B 3FET_B 3IH5_B 2A1T_S 1EFV_B 1T9G_S 2A1U_B 1O96_E 1O94_C 3CLU_C ....
Probab=32.88 E-value=1.7e+02 Score=20.25 Aligned_cols=62 Identities=23% Similarity=0.310 Sum_probs=39.9
Q ss_pred HHHHHhhCCc-EEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEec-hhHHHHHHHHHHC
Q 024065 28 LKARLVAGGH-RVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHS-LGGVTLALAADKF 99 (273)
Q Consensus 28 ~~~~l~~~g~-~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S-~Gg~~a~~~a~~~ 99 (273)
+...+...|. +|+.++.+.. ..++.+.+++-+.+++++. + ..++++|++ .|.-++-.+|.+.
T Consensus 50 l~~~l~~~G~d~v~~~~~~~~--------~~~~~~~~a~~l~~~~~~~-~-~~lVl~~~t~~g~~la~~lA~~L 113 (164)
T PF01012_consen 50 LRKALAKYGADKVYHIDDPAL--------AEYDPEAYADALAELIKEE-G-PDLVLFGSTSFGRDLAPRLAARL 113 (164)
T ss_dssp HHHHHHSTTESEEEEEE-GGG--------TTC-HHHHHHHHHHHHHHH-T--SEEEEESSHHHHHHHHHHHHHH
T ss_pred HhhhhhhcCCcEEEEecCccc--------cccCHHHHHHHHHHHHHhc-C-CCEEEEcCcCCCCcHHHHHHHHh
Confidence 3344555676 6888876532 2257788999999999986 4 357788765 4555777777664
No 424
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=32.69 E-value=67 Score=23.62 Aligned_cols=15 Identities=53% Similarity=0.753 Sum_probs=12.4
Q ss_pred HHHhhCCcEEEEecc
Q 024065 30 ARLVAGGHRVTAVDL 44 (273)
Q Consensus 30 ~~l~~~g~~vi~~d~ 44 (273)
..|+++|+.|+++|.
T Consensus 50 ~~LA~~G~~V~gvD~ 64 (213)
T TIGR03840 50 AWLAEQGHRVLGVEL 64 (213)
T ss_pred HHHHhCCCeEEEEeC
Confidence 446788999999996
No 425
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=32.52 E-value=1.3e+02 Score=23.41 Aligned_cols=47 Identities=17% Similarity=0.255 Sum_probs=30.9
Q ss_pred chHHHHHHHHhC--CCCCcEEEEEechhHHHHHHHHHHCCCccceeEEee
Q 024065 63 YSEPLMEVLASL--PAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVT 110 (273)
Q Consensus 63 ~~~~l~~~l~~~--~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lil~~ 110 (273)
...-+..+++.+ .+...+-=+|..||++ +..+|.++..+|.++-+..
T Consensus 57 Q~~k~~~~~~kl~L~~G~~lLDiGCGWG~l-~~~aA~~y~v~V~GvTlS~ 105 (283)
T COG2230 57 QRAKLDLILEKLGLKPGMTLLDIGCGWGGL-AIYAAEEYGVTVVGVTLSE 105 (283)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEeCCChhHH-HHHHHHHcCCEEEEeeCCH
Confidence 344456666666 3445677789999996 5666767766776666433
No 426
>PRK00771 signal recognition particle protein Srp54; Provisional
Probab=32.43 E-value=3e+02 Score=23.10 Aligned_cols=36 Identities=17% Similarity=0.166 Sum_probs=27.8
Q ss_pred CceEEEEccCCCchhh--HHHHHHHHhhCCcEEEEecc
Q 024065 9 EKHFVLVHGVNHGAWC--WYKLKARLVAGGHRVTAVDL 44 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~d~ 44 (273)
+|.++++-|..+++.. -..++..|.++|++|..++.
T Consensus 94 ~p~vI~lvG~~GsGKTTtaakLA~~L~~~g~kV~lV~~ 131 (437)
T PRK00771 94 KPQTIMLVGLQGSGKTTTAAKLARYFKKKGLKVGLVAA 131 (437)
T ss_pred CCeEEEEECCCCCcHHHHHHHHHHHHHHcCCeEEEecC
Confidence 5778888888777655 35778888888999888875
No 427
>PLN02840 tRNA dimethylallyltransferase
Probab=32.36 E-value=1.9e+02 Score=24.05 Aligned_cols=30 Identities=13% Similarity=0.131 Sum_probs=21.4
Q ss_pred CCcchhhchHHHHHHHHhC-CCCCcEEEEEe
Q 024065 56 DVHTFHAYSEPLMEVLASL-PAEEKVILVGH 85 (273)
Q Consensus 56 ~~~~~~~~~~~l~~~l~~~-~~~~~~~lvG~ 85 (273)
..|+..++.++..+.++.+ ...+..+|||-
T Consensus 88 e~ySv~~F~~~A~~~I~~i~~rgkiPIvVGG 118 (421)
T PLN02840 88 DDYSVGAFFDDARRATQDILNRGRVPIVAGG 118 (421)
T ss_pred CceeHHHHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 4578999999999888876 23344566663
No 428
>PRK00865 glutamate racemase; Provisional
Probab=32.30 E-value=1.2e+02 Score=23.09 Aligned_cols=56 Identities=4% Similarity=-0.086 Sum_probs=39.0
Q ss_pred cceEEEEeecCCCCCCHHHHHHHHHhCCCceEEEEecCCccccccCh-HhHHHHHHHHHh
Q 024065 206 SVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDHMAMLSDP-QKLCDCLSQISL 264 (273)
Q Consensus 206 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~-~~~~~~i~~fl~ 264 (273)
+.|+.++=.. +=.....+.+.+.+|+.+++.+-+..|+|+-++. +++.+.+.+-++
T Consensus 5 ~~~IgvfDSG---iGGLtvl~~i~~~lp~~~~iY~~D~~~~PYG~ks~~~i~~~~~~~~~ 61 (261)
T PRK00865 5 NAPIGVFDSG---VGGLTVLREIRRLLPDEHIIYVGDTARFPYGEKSEEEIRERTLEIVE 61 (261)
T ss_pred CCeEEEEECC---ccHHHHHHHHHHHCCCCCEEEEecCCCCCCCCCCHHHHHHHHHHHHH
Confidence 3466555332 2245678889999999999999999999998876 555554444433
No 429
>cd00281 DAP_dppA Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacterized
Probab=32.14 E-value=2.1e+02 Score=22.08 Aligned_cols=52 Identities=15% Similarity=0.138 Sum_probs=34.0
Q ss_pred cceEEEEeecCCCCCCHHHHHHHHHhCCCceEEEEe-cCCccccc-cChHhHHHHHHHHH
Q 024065 206 SVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIK-GGDHMAML-SDPQKLCDCLSQIS 263 (273)
Q Consensus 206 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~-~~gH~~~~-~~~~~~~~~i~~fl 263 (273)
.+||+++.|++- ..++..+.+|+++.+.++ +.|++.-. -.|.+..+.|.+=.
T Consensus 146 gVPV~lvsGDd~------~~~ea~~~~P~~~tv~vK~~~gr~aa~~~~p~~a~~~I~~~a 199 (265)
T cd00281 146 GVPVVMVAGDAE------VCKEAKAYDAQVETVVTKKGMGRFSVKAPSPQKVLRAIREGT 199 (265)
T ss_pred CCCEEEEecCHH------HHHHHHHhCCCceEEEEeeeeCCCccccCCHHHHHHHHHHHH
Confidence 899999999652 334445567999888777 34544333 35666666666555
No 430
>TIGR03702 lip_kinase_YegS lipid kinase YegS. Members of this protein family are designated YegS, an apparent lipid kinase family in the Proteobacteria. Bakali, et al. report phosphatidylglycerol kinase activity for the member from Escherichia coli, but refrain from calling that activity synonymous with its biological role. Note that a broader, subfamily-type model (TIGR00147), includes this family but also multiple paralogs in some species and varied functions.
Probab=32.13 E-value=2.4e+02 Score=21.89 Aligned_cols=31 Identities=10% Similarity=0.093 Sum_probs=23.1
Q ss_pred eEEEEccCCCchhhHHHHHHHHhhCCcEEEE
Q 024065 11 HFVLVHGVNHGAWCWYKLKARLVAGGHRVTA 41 (273)
Q Consensus 11 ~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~ 41 (273)
.+++++|-++....|..+.+.|.++|+.+..
T Consensus 2 ~~~I~N~~~~~~~~~~~~~~~l~~~g~~~~v 32 (293)
T TIGR03702 2 ALLILNGKQADNEDVREAVGDLRDEGIQLHV 32 (293)
T ss_pred EEEEEeCCccchhHHHHHHHHHHHCCCeEEE
Confidence 4677888766667788888889888876433
No 431
>COG0324 MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis]
Probab=31.79 E-value=1.9e+02 Score=22.92 Aligned_cols=77 Identities=10% Similarity=0.146 Sum_probs=45.7
Q ss_pred CceEEEEccCCCchhhHHHHHHHHhh-CCcEEEEecc----CCC----CCCC--------------CCcCCCcchhhchH
Q 024065 9 EKHFVLVHGVNHGAWCWYKLKARLVA-GGHRVTAVDL----AAS----GINM--------------KRIEDVHTFHAYSE 65 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~~~~~~~l~~-~g~~vi~~d~----~G~----G~s~--------------~~~~~~~~~~~~~~ 65 (273)
.+.++++-|-.+++..-. +-.|++ .|-.||..|- +|. ++-+ .++...++..++.+
T Consensus 2 ~~~~i~I~GPTAsGKT~l--ai~LAk~~~~eIIs~DSmQvYr~mdIGTAKps~~e~~~vpHhliDi~~p~e~ysa~~f~~ 79 (308)
T COG0324 2 KPKLIVIAGPTASGKTAL--AIALAKRLGGEIISLDSMQVYRGLDIGTAKPSLEELAGVPHHLIDIRDPTESYSAAEFQR 79 (308)
T ss_pred CccEEEEECCCCcCHHHH--HHHHHHHcCCcEEecchhhhcCCCcccCCCCCHHHHcCCCEEEecccCccccccHHHHHH
Confidence 456777777766665432 222333 2467898883 332 2211 12334678889999
Q ss_pred HHHHHHHhC-CCCCcEEEEEech
Q 024065 66 PLMEVLASL-PAEEKVILVGHSL 87 (273)
Q Consensus 66 ~l~~~l~~~-~~~~~~~lvG~S~ 87 (273)
+....++.+ ...+-.++||-|+
T Consensus 80 ~a~~~i~~i~~rgk~pIlVGGTg 102 (308)
T COG0324 80 DALAAIDDILARGKLPILVGGTG 102 (308)
T ss_pred HHHHHHHHHHhCCCCcEEEccHH
Confidence 998888887 2335677777443
No 432
>TIGR00421 ubiX_pad polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases. In E.coli, the protein UbiX (3-octaprenyl-4-hydroxybenzoate carboxy-lyase) has been shown to be involved in the third step of ubiquinone biosynthesis. It catalyzes the reaction [3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2]. The knockout of the homologous protein in yeast confers sensitivity to phenylacrylic acid. Members are not restricted to ubiquinone-synthesizing species. This family represents a distinct clade within the flavoprotein family of Pfam model pfam02441.
Probab=31.75 E-value=1.9e+02 Score=20.64 Aligned_cols=59 Identities=17% Similarity=0.049 Sum_probs=32.2
Q ss_pred CceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHH-HHHHhC
Q 024065 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLM-EVLASL 74 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~-~~l~~~ 74 (273)
+.++++++--.-....-..-+..|.+.|+.++-+.. |+- ....+++++++.+. .+++.+
T Consensus 112 ~~pv~i~P~~m~~~~~~~~Nl~~L~~~G~~ii~P~~-g~~------~~p~~~~~~~~~i~~~~l~~l 171 (181)
T TIGR00421 112 RRKLVLVPRETPLNSIHLENMLRLSRMGAIILPPMP-AFY------TRPKSVEDMIDFIVGRVLDQL 171 (181)
T ss_pred CCCEEEEeCCCcCCHHHHHHHHHHHHCCCEEECCCC-ccc------CCCCCHHHHHHHHHHHHHHHc
Confidence 456666662111111124455678888998876653 431 12247788777664 455666
No 433
>PRK11320 prpB 2-methylisocitrate lyase; Provisional
Probab=31.74 E-value=2.5e+02 Score=21.99 Aligned_cols=65 Identities=9% Similarity=0.273 Sum_probs=43.0
Q ss_pred ccCCCchhhHHHHHHHHhhCCcEEEEe-ccCC---CCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEE
Q 024065 16 HGVNHGAWCWYKLKARLVAGGHRVTAV-DLAA---SGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVG 84 (273)
Q Consensus 16 hG~~~~~~~~~~~~~~l~~~g~~vi~~-d~~G---~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG 84 (273)
.|+| +.....+.++.+.+.|..-+.+ |..+ +|..... ...+.+++++-|.+.++.. ...+++|++
T Consensus 87 ~GyG-~~~~v~r~V~~~~~aGaagi~IEDq~~pK~cg~~~~~--~lv~~ee~~~kI~Aa~~a~-~~~d~~IiA 155 (292)
T PRK11320 87 TGFG-GAFNIARTVKSMIKAGAAAVHIEDQVGAKRCGHRPNK--EIVSQEEMVDRIKAAVDAR-TDPDFVIMA 155 (292)
T ss_pred CCCC-CHHHHHHHHHHHHHcCCeEEEEecCCCccccCCCCCC--cccCHHHHHHHHHHHHHhc-cCCCeEEEE
Confidence 6777 6666667788888888877777 5542 2322211 2357888888888888876 445666665
No 434
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=31.71 E-value=79 Score=24.88 Aligned_cols=13 Identities=8% Similarity=0.179 Sum_probs=8.8
Q ss_pred ChHhHHHHHHHHH
Q 024065 251 DPQKLCDCLSQIS 263 (273)
Q Consensus 251 ~~~~~~~~i~~fl 263 (273)
.|+++.+.+.++|
T Consensus 308 ~~e~V~~~~~~~l 320 (322)
T PRK10964 308 SAETVFQKLETLI 320 (322)
T ss_pred CHHHHHHHHHHHh
Confidence 4677777776665
No 435
>COG2326 Uncharacterized conserved protein [Function unknown]
Probab=31.20 E-value=2.4e+02 Score=21.60 Aligned_cols=68 Identities=16% Similarity=0.224 Sum_probs=45.8
Q ss_pred CCceEEEEccCCCc--hhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEe
Q 024065 8 EEKHFVLVHGVNHG--AWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGH 85 (273)
Q Consensus 8 ~~~~vv~lhG~~~~--~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~ 85 (273)
+...|+++-|.-.. ...-..+.+.|..+|++|+++--|. .-+.--.-+...+.+++..+.++++--
T Consensus 72 ~~~vvivfEGrDAAGKgG~Ikri~~~lNPR~~rvval~aPt------------~~E~~qwY~qRy~~~lPa~GeiviFdR 139 (270)
T COG2326 72 GQRVVIVFEGRDAAGKGGAIKRITEALNPRGARVVALPAPT------------DRERGQWYFQRYVAHLPAAGEIVIFDR 139 (270)
T ss_pred CCeEEEEEecccccCCCchhHHHhhhcCCceeEEeecCCCC------------hHhhccHHHHHHHHhCCCCCeEEEech
Confidence 35677888887433 3446788899999999999987651 112222345677888865667777777
Q ss_pred ch
Q 024065 86 SL 87 (273)
Q Consensus 86 S~ 87 (273)
|+
T Consensus 140 Sw 141 (270)
T COG2326 140 SW 141 (270)
T ss_pred hh
Confidence 76
No 436
>TIGR00682 lpxK tetraacyldisaccharide 4'-kinase. Also called lipid-A 4'-kinase. This essential gene encodes an enzyme in the pathway of lipid A biosynthesis in Gram-negative organisms. A single copy of this protein is found in Gram-negative bacteria. PSI-BLAST converges on this set of apparent orthologs without identifying any other homologs.
Probab=31.03 E-value=1.7e+02 Score=23.17 Aligned_cols=43 Identities=21% Similarity=0.135 Sum_probs=28.4
Q ss_pred CceEEEEccC--CCchhh--HHHHHHHHhhCCcEEEEeccCCCCCCCC
Q 024065 9 EKHFVLVHGV--NHGAWC--WYKLKARLVAGGHRVTAVDLAASGINMK 52 (273)
Q Consensus 9 ~~~vv~lhG~--~~~~~~--~~~~~~~l~~~g~~vi~~d~~G~G~s~~ 52 (273)
.-|||.+-.+ |+++.. -..+++.|.++|+++..+- ||||.+..
T Consensus 27 ~vPVIsVGNitvGGTGKTP~v~~La~~l~~~G~~~~IlS-RGYg~~~~ 73 (311)
T TIGR00682 27 PVPVVIVGNLSVGGTGKTPVVVWLAELLKDRGLRVGVLS-RGYGSKTK 73 (311)
T ss_pred CCCEEEEeccccCCcChHHHHHHHHHHHHHCCCEEEEEC-CCCCCCCC
Confidence 3467777544 333332 3567888889999877665 79998654
No 437
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=31.02 E-value=79 Score=28.40 Aligned_cols=33 Identities=30% Similarity=0.390 Sum_probs=23.0
Q ss_pred hHHHHHHHH---hCCCCCcEEEEEechhHHHHHHHHH
Q 024065 64 SEPLMEVLA---SLPAEEKVILVGHSLGGVTLALAAD 97 (273)
Q Consensus 64 ~~~l~~~l~---~~~~~~~~~lvG~S~Gg~~a~~~a~ 97 (273)
-.++.+.+. .. +..--++.|.|.||.++..+|.
T Consensus 50 Y~~l~~~l~~~~~~-~~~~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 50 YGALLELLGAHLRL-RVRVDVISGTSAGGINGVLLAY 85 (739)
T ss_pred HHHHHHHhhhhhcc-CCCCceEEeeCHHHHHHHHHHc
Confidence 334445554 33 4556678899999999988886
No 438
>PRK10867 signal recognition particle protein; Provisional
Probab=30.90 E-value=3.2e+02 Score=22.92 Aligned_cols=70 Identities=17% Similarity=0.193 Sum_probs=39.7
Q ss_pred HHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEechhHHHHHHHHHHCCC--cccee
Q 024065 29 KARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPH--KISVA 106 (273)
Q Consensus 29 ~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~--~v~~l 106 (273)
.......+|.++.+|-+|.... -+.+.+.+..+.+.. ....+++|.-++-|.-+...+..+-+ .+.++
T Consensus 176 ~~~a~~~~~DvVIIDTaGrl~~---------d~~lm~eL~~i~~~v-~p~evllVlda~~gq~av~~a~~F~~~~~i~gi 245 (433)
T PRK10867 176 LEEAKENGYDVVIVDTAGRLHI---------DEELMDELKAIKAAV-NPDEILLVVDAMTGQDAVNTAKAFNEALGLTGV 245 (433)
T ss_pred HHHHHhcCCCEEEEeCCCCccc---------CHHHHHHHHHHHHhh-CCCeEEEEEecccHHHHHHHHHHHHhhCCCCEE
Confidence 3344455799999999885322 133444455555545 44556666555555556565555432 35666
Q ss_pred EE
Q 024065 107 VF 108 (273)
Q Consensus 107 il 108 (273)
|+
T Consensus 246 Il 247 (433)
T PRK10867 246 IL 247 (433)
T ss_pred EE
Confidence 65
No 439
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=30.40 E-value=2e+02 Score=20.45 Aligned_cols=31 Identities=6% Similarity=-0.148 Sum_probs=18.1
Q ss_pred EEEEccCCCchhhHHHHHHHHhhCCcEEEEeccC
Q 024065 12 FVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLA 45 (273)
Q Consensus 12 vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~ 45 (273)
-.|-..++... ....+.+.+.||.++.++.-
T Consensus 99 ~~fr~P~G~~~---~~~~~~l~~~G~~~v~w~~~ 129 (191)
T TIGR02764 99 TLFRPPSGAFN---KAVLKAAESLGYTVVHWSVD 129 (191)
T ss_pred CEEECCCcCCC---HHHHHHHHHcCCeEEEecCC
Confidence 34444444332 23445566778998888864
No 440
>PF08496 Peptidase_S49_N: Peptidase family S49 N-terminal; InterPro: IPR013703 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain is found to the N terminus of bacterial signal peptidases that belong to the MEROPS peptidase family S49 (protease IV family, clan SK) (see also IPR002142 from INTERPRO) [, ]. ; GO: 0004252 serine-type endopeptidase activity, 0005886 plasma membrane
Probab=30.40 E-value=92 Score=21.63 Aligned_cols=48 Identities=21% Similarity=0.371 Sum_probs=34.4
Q ss_pred cEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEechhHHH
Q 024065 37 HRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVT 91 (273)
Q Consensus 37 ~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg~~ 91 (273)
-+++++|+-|- . ....++.+.+.|.+++......+.+.+-=-|-||++
T Consensus 98 ~r~~VldF~Gd------i-~A~~v~~LReeisail~~a~~~DeV~~rLES~GG~V 145 (155)
T PF08496_consen 98 PRLFVLDFKGD------I-KASEVESLREEISAILSVATPEDEVLVRLESPGGMV 145 (155)
T ss_pred CeEEEEecCCC------c-cHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCcee
Confidence 68999999761 1 113567777788888877745577888888888874
No 441
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=30.38 E-value=2.4e+02 Score=22.88 Aligned_cols=59 Identities=14% Similarity=-0.052 Sum_probs=32.1
Q ss_pred CceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhC
Q 024065 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL 74 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~ 74 (273)
...||.+-|.-.|+- -+..|.++||.|+.+-+.-+..+.. ...+.++...|...+.+.+
T Consensus 4 ~kV~v~mSGGVDSSV----aA~lLk~QGyeViGl~m~~~~~~~~---~~C~s~~d~~da~~va~~L 62 (356)
T COG0482 4 KKVLVGMSGGVDSSV----AAYLLKEQGYEVIGLFMKNWDEDGG---GGCCSEEDLRDAERVADQL 62 (356)
T ss_pred cEEEEEccCCHHHHH----HHHHHHHcCCeEEEEEEEeeccCCC---CcCCchhHHHHHHHHHHHh
Confidence 345555555443332 2335667899999998887664111 1123344444555555555
No 442
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=30.36 E-value=62 Score=24.77 Aligned_cols=30 Identities=20% Similarity=0.202 Sum_probs=23.9
Q ss_pred CcEE-EEEechhHHHHHHHHHHCCCccceeE
Q 024065 78 EKVI-LVGHSLGGVTLALAADKFPHKISVAV 107 (273)
Q Consensus 78 ~~~~-lvG~S~Gg~~a~~~a~~~p~~v~~li 107 (273)
.++. ++|.|+|+.-+..+.++.+.+-.+++
T Consensus 39 ~~f~~~~GvSAGA~n~~aYls~Q~gra~~~~ 69 (292)
T COG4667 39 NPFDLVVGVSAGALNLVAYLSKQRGRARRVI 69 (292)
T ss_pred CCcCeeeeecHhHHhHHHHhhcCCchHHHHH
Confidence 4555 66999999999999988887766655
No 443
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=29.97 E-value=38 Score=26.58 Aligned_cols=17 Identities=24% Similarity=0.466 Sum_probs=14.6
Q ss_pred EEEEechhHHHHHHHHH
Q 024065 81 ILVGHSLGGVTLALAAD 97 (273)
Q Consensus 81 ~lvG~S~Gg~~a~~~a~ 97 (273)
.++|.|.||.+|+.++.
T Consensus 45 li~GTStGgiiA~~l~~ 61 (309)
T cd07216 45 LIGGTSTGGLIAIMLGR 61 (309)
T ss_pred eeeeccHHHHHHHHhcc
Confidence 57799999999998873
No 444
>PRK14569 D-alanyl-alanine synthetase A; Provisional
Probab=29.95 E-value=1.4e+02 Score=23.34 Aligned_cols=36 Identities=17% Similarity=0.207 Sum_probs=26.3
Q ss_pred CceEEEEccCCCchh-----hHHHHHHHHhhCCcEEEEecc
Q 024065 9 EKHFVLVHGVNHGAW-----CWYKLKARLVAGGHRVTAVDL 44 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~-----~~~~~~~~l~~~g~~vi~~d~ 44 (273)
+..|.+++|..++-+ ....+.+.|.+.||+|+.+|.
T Consensus 3 ~~~i~vl~gg~s~e~~vsl~s~~~v~~aL~~~g~~~~~~~~ 43 (296)
T PRK14569 3 NEKIVVLYGGDSPEREVSLKSGKAVLDSLISQGYDAVGVDA 43 (296)
T ss_pred CcEEEEEeCCCCCchHhHHHHHHHHHHHHHHcCCEEEEEcC
Confidence 446777777554432 356788899999999999885
No 445
>cd01715 ETF_alpha The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin.
Probab=29.85 E-value=2e+02 Score=20.09 Aligned_cols=61 Identities=23% Similarity=0.201 Sum_probs=39.1
Q ss_pred HHHhhCCc-EEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEec-hhHHHHHHHHHHCC
Q 024065 30 ARLVAGGH-RVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHS-LGGVTLALAADKFP 100 (273)
Q Consensus 30 ~~l~~~g~-~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S-~Gg~~a~~~a~~~p 100 (273)
..+...|. +|+.++.+.. ..++.+.+++-+.++++.. + ..++|+|+| .|..++-.+|.+..
T Consensus 45 ~~~~~~Gad~v~~~~~~~~--------~~~~~~~~a~al~~~i~~~-~-p~~Vl~~~t~~g~~la~rlAa~L~ 107 (168)
T cd01715 45 AALKAYGADKVLVAEDPAL--------AHYLAEPYAPALVALAKKE-K-PSHILAGATSFGKDLAPRVAAKLD 107 (168)
T ss_pred HHHHhcCCCEEEEecChhh--------cccChHHHHHHHHHHHHhc-C-CCEEEECCCccccchHHHHHHHhC
Confidence 34444455 5666654321 2257788888899999887 5 477777654 55567777777654
No 446
>TIGR03569 NeuB_NnaB N-acetylneuraminate synthase. This family is a subset of the Pfam model pfam03102 and is believed to include only authentic NeuB N-acetylneuraminate (sialic acid) synthase enzymes. The majority of the genes identified by this model are observed adjacent to both the NeuA and NeuC genes which together effect the biosynthesis of CMP-N-acetylneuraminate from UDP-N-acetylglucosamine.
Probab=29.82 E-value=2.9e+02 Score=22.11 Aligned_cols=91 Identities=15% Similarity=0.035 Sum_probs=51.7
Q ss_pred CceEEEEccCCCchhhHHHHHHHHhhCCcE---EEEeccCCCCCCCCCcCCCcchhhc-hHHHHHHHHhCCCCCcEEEEE
Q 024065 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHR---VTAVDLAASGINMKRIEDVHTFHAY-SEPLMEVLASLPAEEKVILVG 84 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~---vi~~d~~G~G~s~~~~~~~~~~~~~-~~~l~~~l~~~~~~~~~~lvG 84 (273)
+.||++--|. ++...|...++.+.+.|.. ++.+-- .|..|. ..++. ...+ ..++...+ -++.+-+
T Consensus 133 gkPvilStGm-atl~Ei~~Av~~i~~~G~~~~~i~llhC----~s~YP~----~~~~~nL~~I-~~Lk~~f~-~pVG~Sd 201 (329)
T TIGR03569 133 GKPVILSTGM-ATLEEIEAAVGVLRDAGTPDSNITLLHC----TTEYPA----PFEDVNLNAM-DTLKEAFD-LPVGYSD 201 (329)
T ss_pred CCcEEEECCC-CCHHHHHHHHHHHHHcCCCcCcEEEEEE----CCCCCC----CcccCCHHHH-HHHHHHhC-CCEEECC
Confidence 6688888888 5888899999999877754 444431 122221 11111 1222 23333313 5777889
Q ss_pred echhHHHHHHHHHHCCCccceeEEee
Q 024065 85 HSLGGVTLALAADKFPHKISVAVFVT 110 (273)
Q Consensus 85 ~S~Gg~~a~~~a~~~p~~v~~lil~~ 110 (273)
|+.|-.++..+.+.-..-|.+-+..+
T Consensus 202 Ht~G~~~~~aAvalGA~iIEkH~tld 227 (329)
T TIGR03569 202 HTLGIEAPIAAVALGATVIEKHFTLD 227 (329)
T ss_pred CCccHHHHHHHHHcCCCEEEeCCChh
Confidence 99997766555544333344433333
No 447
>PRK14582 pgaB outer membrane N-deacetylase; Provisional
Probab=29.73 E-value=69 Score=28.37 Aligned_cols=76 Identities=16% Similarity=0.090 Sum_probs=45.1
Q ss_pred CCceEEEEccCCCc----------hhhHHHHHHHHhhCCcEEEEeccCC---CCCCCCCcC-CCcch----hhchHHHHH
Q 024065 8 EEKHFVLVHGVNHG----------AWCWYKLKARLVAGGHRVTAVDLAA---SGINMKRIE-DVHTF----HAYSEPLME 69 (273)
Q Consensus 8 ~~~~vv~lhG~~~~----------~~~~~~~~~~l~~~g~~vi~~d~~G---~G~s~~~~~-~~~~~----~~~~~~l~~ 69 (273)
++-+|++-|..... ...|+..++.|.++||+++.+|--- .|....+.. -..|+ .+....+.-
T Consensus 47 ~~~~VL~YH~V~d~~~~~~~~~Vspe~Fe~qL~~Lk~nGY~~ISl~el~~~~~g~~~LP~K~VaLTFDDGy~s~yt~A~P 126 (671)
T PRK14582 47 NGFVAIAYHDVEDEAADQRFMSVRTSALREQFAWLRENGYQPVSVAQILEAHRGGKPLPEKAVLLTFDDGYSSFYTRVFP 126 (671)
T ss_pred CceEEEEeCcccCCcccccccccCHHHHHHHHHHHHHCcCEEccHHHHHHHHhcCCCCCCCeEEEEEEcCCCchHHHHHH
Confidence 46789999998532 3458889999999999999987321 121111111 11222 233455677
Q ss_pred HHHhCCCCCc-EEEEE
Q 024065 70 VLASLPAEEK-VILVG 84 (273)
Q Consensus 70 ~l~~~~~~~~-~~lvG 84 (273)
+|++. +..- +.++|
T Consensus 127 ILkky-gvpATfFlvg 141 (671)
T PRK14582 127 ILQAF-QWPAVWAPVG 141 (671)
T ss_pred HHHHc-CCCEEEEEec
Confidence 78887 5543 33444
No 448
>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily. This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.
Probab=29.71 E-value=1.2e+02 Score=18.60 Aligned_cols=27 Identities=11% Similarity=0.090 Sum_probs=13.9
Q ss_pred CCceEEEEccCCCchhhHHHHHHHHhhCCcE
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHR 38 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~ 38 (273)
+++.||+++... .+ ...+..|.+.||.
T Consensus 61 ~~~ivv~C~~G~-rs---~~aa~~L~~~G~~ 87 (100)
T cd01523 61 DQEVTVICAKEG-SS---QFVAELLAERGYD 87 (100)
T ss_pred CCeEEEEcCCCC-cH---HHHHHHHHHcCce
Confidence 345555554322 22 2344566677887
No 449
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=29.71 E-value=1.6e+02 Score=24.32 Aligned_cols=43 Identities=19% Similarity=0.234 Sum_probs=37.0
Q ss_pred CCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCC
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGIN 50 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s 50 (273)
.+.+.|-+-=||.+.-.-....+.|.++||.|+++.--|.|..
T Consensus 183 ~~kp~I~iTmfGvTTp~V~~~~~~Le~~G~Ev~VFHAtG~GG~ 225 (403)
T PF06792_consen 183 EDKPLIGITMFGVTTPCVDAIRERLEEEGYEVLVFHATGTGGR 225 (403)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHHhcCCeEEEEcCCCCchH
Confidence 3567888888888888888999999999999999999998854
No 450
>PRK13938 phosphoheptose isomerase; Provisional
Probab=29.69 E-value=1.4e+02 Score=21.63 Aligned_cols=25 Identities=16% Similarity=0.217 Sum_probs=22.0
Q ss_pred CCCcEEEEEechhHHHHHHHHHHCC
Q 024065 76 AEEKVILVGHSLGGVTLALAADKFP 100 (273)
Q Consensus 76 ~~~~~~lvG~S~Gg~~a~~~a~~~p 100 (273)
..++++++|..-.|.+|..++.+..
T Consensus 44 ~g~rI~i~G~G~S~~~A~~fa~~L~ 68 (196)
T PRK13938 44 AGARVFMCGNGGSAADAQHFAAELT 68 (196)
T ss_pred CCCEEEEEeCcHHHHHHHHHHHHcC
Confidence 5589999999999999999998764
No 451
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=29.49 E-value=2e+02 Score=20.08 Aligned_cols=61 Identities=10% Similarity=0.027 Sum_probs=45.5
Q ss_pred cceEEEEeecCCCCCCHHHHHHHHHhCCCceEEEEecCCccccccChHhHHHHHHHHHhcc
Q 024065 206 SVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDHMAMLSDPQKLCDCLSQISLNR 266 (273)
Q Consensus 206 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 266 (273)
+..++++..--|.-.+.+..+++.+.+.+.++.++--+|..+.-++...+.+.+..++.+.
T Consensus 39 ~yD~i~lG~w~d~G~~d~~~~~fl~~l~~KkV~lF~T~G~~~~s~~~~~~~~~~~~~~~~~ 99 (160)
T PF12641_consen 39 DYDLIFLGFWIDKGTPDKDMKEFLKKLKGKKVALFGTAGAGPDSEYAKKILKNVEALLPKG 99 (160)
T ss_pred CCCEEEEEcCccCCCCCHHHHHHHHHccCCeEEEEEecCCCCchHHHHHHHHHHHHhhccC
Confidence 4567888777788777777888888888888888887777666666677777777777644
No 452
>cd05007 SIS_Etherase N-acetylmuramic acid 6-phosphate etherase. Members of this family contain the SIS (Sugar ISomerase) domain. The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. The bacterial cell wall sugar N-acetylmuramic acid carries a unique D-lactyl ether substituent at the C3 position. The etherase catalyzes the cleavage of the lactyl ether bond of N-acetylmuramic acid 6-phosphate.
Probab=29.45 E-value=1e+02 Score=23.44 Aligned_cols=32 Identities=28% Similarity=0.367 Sum_probs=22.9
Q ss_pred HHHhCCCCCcEEEEEechhHHHHHHHHHHCCC
Q 024065 70 VLASLPAEEKVILVGHSLGGVTLALAADKFPH 101 (273)
Q Consensus 70 ~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~ 101 (273)
+.+.+...++++++|..-.|.++...|...+.
T Consensus 42 ~~~~l~~ggrl~~~GaGtSg~la~~da~e~~~ 73 (257)
T cd05007 42 AAERLRAGGRLIYVGAGTSGRLGVLDASELPP 73 (257)
T ss_pred HHHHHHcCCEEEEEcCcHHHHHHHHHHHhccc
Confidence 33333345799999999999999777666543
No 453
>PRK09273 hypothetical protein; Provisional
Probab=29.31 E-value=2.4e+02 Score=20.86 Aligned_cols=76 Identities=21% Similarity=0.187 Sum_probs=40.5
Q ss_pred hHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCc-EEEEEechhHHHHHHHHHHCCCc
Q 024065 24 CWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEK-VILVGHSLGGVTLALAADKFPHK 102 (273)
Q Consensus 24 ~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~lvG~S~Gg~~a~~~a~~~p~~ 102 (273)
.+..+...|.+.||.|+=+-. .+... ...++.+++.-+...+..- ..+. +.++|.-.|.. ..|.++|.
T Consensus 18 i~~~L~~~L~~~G~eV~D~G~-----~~~~~-~s~dYpd~a~~vA~~V~~g-~~d~GIliCGTGiG~s---iAANK~pG- 86 (211)
T PRK09273 18 IYEALKKVADPKGHEVFNYGM-----YDEED-HQLTYVQNGIMASILLNSK-AVDFVVTGCGTGQGAM---LALNSFPG- 86 (211)
T ss_pred HHHHHHHHHHHCCCEEEEeCC-----CCCCC-CCCChHHHHHHHHHHHHcC-CCCEEEEEcCcHHHHH---HHHhcCCC-
Confidence 478888999999998743321 11111 1146677777777666543 2233 23334444433 33556775
Q ss_pred cceeEEee
Q 024065 103 ISVAVFVT 110 (273)
Q Consensus 103 v~~lil~~ 110 (273)
|......+
T Consensus 87 Iraalc~d 94 (211)
T PRK09273 87 VVCGYCID 94 (211)
T ss_pred eEEEEeCC
Confidence 43333344
No 454
>PF15566 Imm18: Immunity protein 18
Probab=29.22 E-value=59 Score=17.63 Aligned_cols=30 Identities=13% Similarity=0.162 Sum_probs=23.4
Q ss_pred hhhchHHHHHHHHhCCCCCcEEEEEechhHH
Q 024065 60 FHAYSEPLMEVLASLPAEEKVILVGHSLGGV 90 (273)
Q Consensus 60 ~~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg~ 90 (273)
+..+.++|..+.... ..+.++++--||||.
T Consensus 4 L~~L~~~l~~L~~~~-~~~H~Hlmtp~WgG~ 33 (52)
T PF15566_consen 4 LELLQDQLENLQEKE-PFDHEHLMTPDWGGE 33 (52)
T ss_pred HHHHHHHHHHHHhcc-CCCCceecccccccc
Confidence 445667777777776 678899999999996
No 455
>PF13709 DUF4159: Domain of unknown function (DUF4159)
Probab=29.10 E-value=2.3e+02 Score=20.76 Aligned_cols=38 Identities=8% Similarity=-0.036 Sum_probs=32.4
Q ss_pred cceEEEEeecCCCCCCHHHHHHHHHhCCCceEEEEecC
Q 024065 206 SVKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGG 243 (273)
Q Consensus 206 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (273)
..|++++.|..+...+.+..+.+.+.+.+-=+..++.+
T Consensus 53 ~yP~ly~~g~~~~~~s~~e~~~Lr~Yl~~GGfl~~D~~ 90 (207)
T PF13709_consen 53 FYPFLYWPGHGDFPLSDEEIANLRRYLENGGFLLFDDR 90 (207)
T ss_pred hCCEEEEeCCCCCCCCHHHHHHHHHHHHcCCEEEEECC
Confidence 77999999999998888888888888877677778755
No 456
>PRK06696 uridine kinase; Validated
Probab=28.85 E-value=1.7e+02 Score=21.64 Aligned_cols=36 Identities=14% Similarity=0.135 Sum_probs=26.6
Q ss_pred CCceEEEEccCCCchhhH--HHHHHHHhhCCcEEEEec
Q 024065 8 EEKHFVLVHGVNHGAWCW--YKLKARLVAGGHRVTAVD 43 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~--~~~~~~l~~~g~~vi~~d 43 (273)
++|.||.+-|.++++... ..+++.|.+.|..|+.+.
T Consensus 20 ~~~~iI~I~G~sgsGKSTlA~~L~~~l~~~g~~v~~~~ 57 (223)
T PRK06696 20 TRPLRVAIDGITASGKTTFADELAEEIKKRGRPVIRAS 57 (223)
T ss_pred CCceEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEec
Confidence 478999999997777653 567778877777777643
No 457
>PF06289 FlbD: Flagellar protein (FlbD); InterPro: IPR009384 This family consists of several bacterial FlbD flagellar proteins. The exact function of this family is unknown [].
Probab=28.74 E-value=1.2e+02 Score=17.15 Aligned_cols=34 Identities=9% Similarity=0.191 Sum_probs=26.2
Q ss_pred CCCceEEEEecCCccccccChHhHHHHHHHHHhcc
Q 024065 232 YPVNEVMEIKGGDHMAMLSDPQKLCDCLSQISLNR 266 (273)
Q Consensus 232 ~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 266 (273)
.|+ +...+-++.++.-.|.++++.+.+.+|-++.
T Consensus 25 ~PD-TvItL~~G~k~vV~Es~~eVi~ki~~y~~~i 58 (60)
T PF06289_consen 25 TPD-TVITLTNGKKYVVKESVEEVIEKIIEYRRKI 58 (60)
T ss_pred cCC-eEEEEeCCCEEEEECCHHHHHHHHHHHHHhc
Confidence 466 5566666778888889999999999987653
No 458
>PRK14479 dihydroxyacetone kinase; Provisional
Probab=28.70 E-value=2.1e+02 Score=24.98 Aligned_cols=34 Identities=26% Similarity=0.318 Sum_probs=26.6
Q ss_pred CCceEEEEccCCCchhh-----HHHHHHHHhhCCcEEEE
Q 024065 8 EEKHFVLVHGVNHGAWC-----WYKLKARLVAGGHRVTA 41 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~-----~~~~~~~l~~~g~~vi~ 41 (273)
+...+|++.|+|+.+.. ++.+.+.|.++|..|..
T Consensus 250 ~d~v~~lvN~lG~t~~~El~i~~~~~~~~l~~~~i~v~~ 288 (568)
T PRK14479 250 GERVAVLVNGLGATPYEELFVVYGAVARLLAARGITVVR 288 (568)
T ss_pred CCeEEEEecCCCCCcHHHHHHHHHHHHHHHHHCCCEEEE
Confidence 46799999999988865 56788888888876543
No 459
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=28.59 E-value=43 Score=27.76 Aligned_cols=40 Identities=18% Similarity=0.076 Sum_probs=24.1
Q ss_pred ceEEEEeecCCCCCCHHHHHHHHHhCCCceEEEEecCCccccc
Q 024065 207 VKRVYLVCEEDIGLPKQFQHWMIQNYPVNEVMEIKGGDHMAML 249 (273)
Q Consensus 207 ~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 249 (273)
..|++..|+.|+......... .-......+++|++|..-+
T Consensus 377 tnviFtNG~~DPW~~lgv~~~---~~~~~~~~~I~g~~Hc~Dl 416 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALGVTSD---SSDSVPAIVIPGGAHCSDL 416 (434)
T ss_dssp -SEEEEEETT-CCGGGS--S----SSSSEEEEEETT--TTGGG
T ss_pred CeEEeeCCCCCCcccccCCCC---CCCCcccEEECCCeeeccc
Confidence 469999999999876552221 2234566789999997654
No 460
>PLN02735 carbamoyl-phosphate synthase
Probab=28.56 E-value=2.5e+02 Score=27.00 Aligned_cols=86 Identities=13% Similarity=0.114 Sum_probs=48.1
Q ss_pred CCceEEEEccCCCch---hh--H--HHHHHHHhhCCcEEEEeccCCCCCCCCC--cCCCcchhhchHHHHHHHHhCCCCC
Q 024065 8 EEKHFVLVHGVNHGA---WC--W--YKLKARLVAGGHRVTAVDLAASGINMKR--IEDVHTFHAYSEPLMEVLASLPAEE 78 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~---~~--~--~~~~~~l~~~g~~vi~~d~~G~G~s~~~--~~~~~~~~~~~~~l~~~l~~~~~~~ 78 (273)
+++.|+++-+.+... -. | -..+..|.+.|+.++++|.-..--|... .+..+-..-..+++.++++.. +.+
T Consensus 573 ~~kkvlilG~G~~~igq~iefd~~~v~~~~alr~~G~~tI~v~~npetvstd~~~aD~~y~~pl~~e~vl~i~~~e-~~d 651 (1102)
T PLN02735 573 NKKKVLILGGGPNRIGQGIEFDYCCCHASFALQDAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLE-RPD 651 (1102)
T ss_pred CCceEEEeCccccccCcccccceeHHHHHHHHHHcCCeEEEEeCCCccccCCcccCCeEEEEeCCHHHHHHHHHHh-CCC
Confidence 456677775543211 12 2 2567788899999999987543333111 111222333477788888777 443
Q ss_pred cEEEEEechhHHHHHHHHH
Q 024065 79 KVILVGHSLGGVTLALAAD 97 (273)
Q Consensus 79 ~~~lvG~S~Gg~~a~~~a~ 97 (273)
- ++ -++||..++.++.
T Consensus 652 ~-Vi--~~~Ggq~~l~la~ 667 (1102)
T PLN02735 652 G-II--VQFGGQTPLKLAL 667 (1102)
T ss_pred E-EE--ECCCchHHHHHHH
Confidence 2 22 3577766665544
No 461
>KOG0854 consensus Alkyl hydroperoxide reductase, thiol specific antioxidant and related enzymes [Posttranslational modification, protein turnover, chaperones]
Probab=28.52 E-value=1.9e+02 Score=20.65 Aligned_cols=56 Identities=13% Similarity=0.221 Sum_probs=38.8
Q ss_pred CceEEEEccCCCchhh------HHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhC
Q 024065 9 EKHFVLVHGVNHGAWC------WYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL 74 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~------~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~ 74 (273)
.=.|+|-|..-.+.-+ +..+++++.++|..+++...- ...+-.+|++||.++....
T Consensus 33 SW~vLFSHPaDFTPVCTTElgr~Akl~pEF~KRnvKlialS~d----------~vesH~~Wi~DIks~~~~~ 94 (224)
T KOG0854|consen 33 SWGVLFSHPADFTPVCTTELGRFAKLAPEFDKRNVKLIALSVD----------DVESHKDWIKDIKSYAKVK 94 (224)
T ss_pred ceEEEecCcccCCcchhHHHHHHHhhChhhhhcCceEEEeehh----------hHHHHHHHHHHHHHHHhcc
Confidence 4468888887655543 456677888888777776431 2347788889998887766
No 462
>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=28.50 E-value=32 Score=28.78 Aligned_cols=32 Identities=16% Similarity=0.199 Sum_probs=26.8
Q ss_pred CCCcEEEEEechhHHHHHHHHHHCCCccceeE
Q 024065 76 AEEKVILVGHSLGGVTLALAADKFPHKISVAV 107 (273)
Q Consensus 76 ~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~li 107 (273)
+.-|=++.|.|+||.+|..++.+.-+.++.+.
T Consensus 200 dLlP~IIsGsS~GaivAsl~~v~~~eEl~~Ll 231 (543)
T KOG2214|consen 200 DLLPNIISGSSAGAIVASLVGVRSNEELKQLL 231 (543)
T ss_pred cccchhhcCCchhHHHHHHHhhcchHHHHHHh
Confidence 55678899999999999999988877776665
No 463
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=28.50 E-value=1.9e+02 Score=24.57 Aligned_cols=45 Identities=20% Similarity=0.183 Sum_probs=32.4
Q ss_pred CccccCCCCceEEEEccCCCch-hhHHHHHHHHhhCCcEEEEeccC
Q 024065 1 MEEVVGMEEKHFVLVHGVNHGA-WCWYKLKARLVAGGHRVTAVDLA 45 (273)
Q Consensus 1 ~~~~~g~~~~~vv~lhG~~~~~-~~~~~~~~~l~~~g~~vi~~d~~ 45 (273)
|++....+++.||+++=.+.+. .-+-.++..|+.+|++|..+.-+
T Consensus 1 ~~~~~~~~~~HVvl~PfpaqGHi~P~l~LAk~La~~G~~VTfv~T~ 46 (477)
T PLN02863 1 MTELNKPAGTHVLVFPFPAQGHMIPLLDLTHRLALRGLTITVLVTP 46 (477)
T ss_pred CcccccCCCCEEEEecCcccchHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 4555566688899987665443 44788999999889988766544
No 464
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=28.47 E-value=1e+02 Score=24.85 Aligned_cols=32 Identities=19% Similarity=0.171 Sum_probs=23.2
Q ss_pred EEEEccC---CCchhhHHHHHHHHhhCCcEEEEec
Q 024065 12 FVLVHGV---NHGAWCWYKLKARLVAGGHRVTAVD 43 (273)
Q Consensus 12 vv~lhG~---~~~~~~~~~~~~~l~~~g~~vi~~d 43 (273)
|+++|.. |+.......++..|.++|++|..+-
T Consensus 3 Il~~~~~~~~gG~e~~~~~la~~L~~~G~~V~v~~ 37 (392)
T cd03805 3 VAFIHPDLGIGGAERLVVDAALALQSRGHEVTIYT 37 (392)
T ss_pred EEEECCCCCCchHHHHHHHHHHHHHhCCCeEEEEc
Confidence 5666643 4444567789999999999987774
No 465
>CHL00175 minD septum-site determining protein; Validated
Probab=28.45 E-value=1.6e+02 Score=22.61 Aligned_cols=37 Identities=19% Similarity=0.164 Sum_probs=26.8
Q ss_pred CceEEEEccCCCchhhH--HHHHHHHhhCCcEEEEeccC
Q 024065 9 EKHFVLVHGVNHGAWCW--YKLKARLVAGGHRVTAVDLA 45 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~--~~~~~~l~~~g~~vi~~d~~ 45 (273)
...|.+..|-|+.+... ..++..|++.|++|+.+|.=
T Consensus 15 ~~vi~v~s~KGGvGKTt~a~nLA~~La~~g~~vlliD~D 53 (281)
T CHL00175 15 SRIIVITSGKGGVGKTTTTANLGMSIARLGYRVALIDAD 53 (281)
T ss_pred ceEEEEEcCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 44666666666655553 47788899999999999863
No 466
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=28.40 E-value=45 Score=17.38 Aligned_cols=33 Identities=24% Similarity=0.133 Sum_probs=21.6
Q ss_pred hCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHH
Q 024065 34 AGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLA 72 (273)
Q Consensus 34 ~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~ 72 (273)
+.+|.+.++|+||+-. ...|.++..+.+.+.+.
T Consensus 11 ~~~y~~~~pdlpg~~t------~G~t~eea~~~~~eal~ 43 (48)
T PF03681_consen 11 DGGYVAYFPDLPGCFT------QGDTLEEALENAKEALE 43 (48)
T ss_dssp SSSEEEEETTCCTCEE------EESSHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCccChhh------cCCCHHHHHHHHHHHHH
Confidence 3578999999997531 12366666666666554
No 467
>PRK14494 putative molybdopterin-guanine dinucleotide biosynthesis protein MobB/FeS domain-containing protein protein; Provisional
Probab=28.39 E-value=2.2e+02 Score=21.39 Aligned_cols=40 Identities=18% Similarity=0.152 Sum_probs=29.2
Q ss_pred eEEEEccCCCchhh--HHHHHHHHhhCCcEEEEeccCCCCCC
Q 024065 11 HFVLVHGVNHGAWC--WYKLKARLVAGGHRVTAVDLAASGIN 50 (273)
Q Consensus 11 ~vv~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~d~~G~G~s 50 (273)
.++.+=|..++... -..+++.|.++|++|.++..-+|+..
T Consensus 2 ~vi~ivG~~gsGKTtl~~~l~~~L~~~G~~V~viK~~~~~~d 43 (229)
T PRK14494 2 RAIGVIGFKDSGKTTLIEKILKNLKERGYRVATAKHTHHEFD 43 (229)
T ss_pred eEEEEECCCCChHHHHHHHHHHHHHhCCCeEEEEEecccCCC
Confidence 35666676555544 36889999999999999988776443
No 468
>PRK07053 glutamine amidotransferase; Provisional
Probab=28.33 E-value=2.6e+02 Score=20.99 Aligned_cols=83 Identities=19% Similarity=0.134 Sum_probs=44.5
Q ss_pred CceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCC-CC------------CcCCCcc--hhhchHHHHHHHHh
Q 024065 9 EKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGIN-MK------------RIEDVHT--FHAYSEPLMEVLAS 73 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s-~~------------~~~~~~~--~~~~~~~l~~~l~~ 73 (273)
++.+|+-|--..+... +.+.|.+.|+.+-.+... .+.. .. .+...++ ...+.....++++.
T Consensus 3 ~~ilviqh~~~e~~g~---i~~~L~~~g~~~~v~~~~-~~~~~~~~~~~~d~lii~Ggp~~~~d~~~~p~~~~~~~~i~~ 78 (234)
T PRK07053 3 KTAVAIRHVAFEDLGS---FEQVLGARGYRVRYVDVG-VDDLETLDALEPDLLVVLGGPIGVYDDELYPFLAPEIALLRQ 78 (234)
T ss_pred ceEEEEECCCCCCChH---HHHHHHHCCCeEEEEecC-CCccCCCCccCCCEEEECCCCCCCCCCCcCCcHHHHHHHHHH
Confidence 4567777876666655 455566667666555331 1110 00 0001111 12345566666665
Q ss_pred CCCCCcEEEEEechhHHHHHHHH
Q 024065 74 LPAEEKVILVGHSLGGVTLALAA 96 (273)
Q Consensus 74 ~~~~~~~~lvG~S~Gg~~a~~~a 96 (273)
. -....-++|.++|..+...+.
T Consensus 79 ~-~~~~~PvlGIC~G~Qlla~al 100 (234)
T PRK07053 79 R-LAAGLPTLGICLGAQLIARAL 100 (234)
T ss_pred H-HHCCCCEEEECccHHHHHHHc
Confidence 5 233456899999998766554
No 469
>TIGR02883 spore_cwlD N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect.
Probab=28.31 E-value=90 Score=22.37 Aligned_cols=15 Identities=13% Similarity=0.100 Sum_probs=11.1
Q ss_pred EEEeccCCCCCCCCCc
Q 024065 39 VTAVDLAASGINMKRI 54 (273)
Q Consensus 39 vi~~d~~G~G~s~~~~ 54 (273)
+|++| ||||.+++..
T Consensus 2 ~I~iD-pGHGg~d~GA 16 (189)
T TIGR02883 2 IIVID-PGHGGIDGGA 16 (189)
T ss_pred EEEEe-CCCCCCCCCC
Confidence 67888 7999876543
No 470
>PLN02924 thymidylate kinase
Probab=28.23 E-value=1.9e+02 Score=21.46 Aligned_cols=39 Identities=13% Similarity=0.147 Sum_probs=28.6
Q ss_pred CCceEEEEccCCCchhh--HHHHHHHHhhCCcEEEEeccCC
Q 024065 8 EEKHFVLVHGVNHGAWC--WYKLKARLVAGGHRVTAVDLAA 46 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~d~~G 46 (273)
....+|.+=|..+++.. -..+.+.|..+|+.|+....|+
T Consensus 14 ~~g~~IviEGiDGsGKsTq~~~L~~~l~~~g~~v~~~~ep~ 54 (220)
T PLN02924 14 SRGALIVLEGLDRSGKSTQCAKLVSFLKGLGVAAELWRFPD 54 (220)
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHHhcCCCceeeeCCC
Confidence 34567777888666544 5678889988899988776664
No 471
>CHL00194 ycf39 Ycf39; Provisional
Probab=28.23 E-value=1.9e+02 Score=22.68 Aligned_cols=23 Identities=9% Similarity=-0.024 Sum_probs=17.8
Q ss_pred hhHHHHHHHHhhCCcEEEEeccC
Q 024065 23 WCWYKLKARLVAGGHRVTAVDLA 45 (273)
Q Consensus 23 ~~~~~~~~~l~~~g~~vi~~d~~ 45 (273)
..=..+++.|.++|++|.+++..
T Consensus 11 ~iG~~lv~~Ll~~g~~V~~l~R~ 33 (317)
T CHL00194 11 TLGRQIVRQALDEGYQVRCLVRN 33 (317)
T ss_pred HHHHHHHHHHHHCCCeEEEEEcC
Confidence 34456888888899999999754
No 472
>PRK00431 RNase III inhibitor; Provisional
Probab=28.16 E-value=2.2e+02 Score=20.10 Aligned_cols=62 Identities=16% Similarity=0.077 Sum_probs=36.4
Q ss_pred HHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEechhH
Q 024065 26 YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGG 89 (273)
Q Consensus 26 ~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg 89 (273)
+.......+.+.+.+++-..|.|.-..+.. .....+.+.+.++++.....+.++++-++---
T Consensus 102 ~~~L~~a~~~~~~sIa~P~lgtG~~g~p~~--~~A~~~~~~i~~f~~~~~~l~~I~~v~~~~~~ 163 (177)
T PRK00431 102 RNSLRLAAELGLRSIAFPAISTGVYGYPLE--DAARIAVKTVREFLTRHKSPEEVYFVCYDEEA 163 (177)
T ss_pred HHHHHHHHHcCCceEEECccccCccCCCHH--HHHHHHHHHHHHHHhcCCCcCEEEEEECCHHH
Confidence 333444445667888888888776654443 24555555555555444345677777776443
No 473
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=28.15 E-value=1.4e+02 Score=23.42 Aligned_cols=32 Identities=19% Similarity=0.191 Sum_probs=16.8
Q ss_pred eEEEEccCCCchhhHHHHHHHHhhCCcEEEEec
Q 024065 11 HFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVD 43 (273)
Q Consensus 11 ~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d 43 (273)
-||+.||..-+-..|...+..-. +.|+|++.+
T Consensus 164 EviLT~g~SrTV~~FL~~A~kk~-Rkf~viVaE 195 (353)
T KOG1465|consen 164 EVILTLGSSRTVENFLKHAAKKG-RKFRVIVAE 195 (353)
T ss_pred ceEEecCccHHHHHHHHHHHhcc-CceEEEEee
Confidence 47888993332233322222221 458888766
No 474
>TIGR00174 miaA tRNA isopentenyltransferase (miaA). Catalyzes the first step in the modification of an adenosine near the anticodon to 2-methylthio-N6-isopentyladenosine.
Probab=28.14 E-value=1.3e+02 Score=23.37 Aligned_cols=31 Identities=13% Similarity=0.267 Sum_probs=20.5
Q ss_pred CCcchhhchHHHHHHHHhC-CCCCcEEEEEec
Q 024065 56 DVHTFHAYSEPLMEVLASL-PAEEKVILVGHS 86 (273)
Q Consensus 56 ~~~~~~~~~~~l~~~l~~~-~~~~~~~lvG~S 86 (273)
..++..++..+..+.++.+ ...+..++||-|
T Consensus 66 ~~~~v~~f~~~a~~~i~~~~~~g~~pi~vGGT 97 (287)
T TIGR00174 66 ESYSAADFQTLALNAIADITARGKIPLLVGGT 97 (287)
T ss_pred heEcHHHHHHHHHHHHHHHHhCCCCEEEEcCc
Confidence 3467788888888888776 223456677644
No 475
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=28.12 E-value=1.1e+02 Score=21.47 Aligned_cols=33 Identities=12% Similarity=0.213 Sum_probs=22.1
Q ss_pred HHHHHHhCCCCCcEEEEEechhHHHHHHHHHHC
Q 024065 67 LMEVLASLPAEEKVILVGHSLGGVTLALAADKF 99 (273)
Q Consensus 67 l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~ 99 (273)
+.++++.+...++++++|....+.+|..++.+.
T Consensus 20 ~~~~~~~l~~a~~I~i~G~G~S~~~A~~~~~~l 52 (179)
T TIGR03127 20 LDKLADKIIKAKRIFVAGAGRSGLVGKAFAMRL 52 (179)
T ss_pred HHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHH
Confidence 444444443447899999888888887776553
No 476
>KOG1511 consensus Mevalonate kinase MVK/ERG12 [Lipid transport and metabolism]
Probab=28.10 E-value=1.5e+02 Score=23.87 Aligned_cols=44 Identities=18% Similarity=0.166 Sum_probs=32.8
Q ss_pred CCceEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCC
Q 024065 8 EEKHFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMK 52 (273)
Q Consensus 8 ~~~~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~ 52 (273)
++-.|.++...... +.+..+-+.|.++||.|+..++-|-|-+-.
T Consensus 337 GGc~itlL~~~~~q-e~i~~~ke~L~s~gf~v~~t~lGG~G~~v~ 380 (397)
T KOG1511|consen 337 GGCVITLLKPGTEQ-EQIDKWKEELESHGFEVFETELGGPGVSVH 380 (397)
T ss_pred CceEEEEECCCCch-HHHHHHHHHHHhcCcceeeccCCCCceEEE
Confidence 36666666543322 667788888999999999999999887643
No 477
>PRK06029 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Provisional
Probab=28.10 E-value=2.3e+02 Score=20.38 Aligned_cols=54 Identities=15% Similarity=0.051 Sum_probs=34.1
Q ss_pred CceEEEEccCCCchhhH-----HHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHH-HHHHhC
Q 024065 9 EKHFVLVHGVNHGAWCW-----YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLM-EVLASL 74 (273)
Q Consensus 9 ~~~vv~lhG~~~~~~~~-----~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~-~~l~~~ 74 (273)
+.++++++- .+| ..-+..|.+.|+.|+-+.. |+-. ...+++++++.+. .+++.+
T Consensus 115 ~~pvii~P~-----~M~~~p~~~~Nl~~L~~~G~~vi~P~~-g~~a------~p~~~~~~~~~~v~~~~~~l 174 (185)
T PRK06029 115 RRRLVLCVR-----ETPLHLGHLRNMTKLAEMGAIIMPPVP-AFYH------RPQTLEDMVDQTVGRVLDLF 174 (185)
T ss_pred CCCEEEEec-----cccCCHHHHHHHHHHHHCcCEEECCCc-cccc------CCCCHHHHHHHHHHHHHHhc
Confidence 456666662 455 4556678888888777664 3321 1248888887764 666777
No 478
>KOG2004 consensus Mitochondrial ATP-dependent protease PIM1/LON [Posttranslational modification, protein turnover, chaperones]
Probab=27.80 E-value=2.7e+02 Score=25.29 Aligned_cols=99 Identities=14% Similarity=0.120 Sum_probs=57.6
Q ss_pred cCCCCceEEEEccCCCchhh--HHHHHHHHhhCCcEEEEe-------ccCCCCCCCCCcCCCcchhhchHHHHHHHHhCC
Q 024065 5 VGMEEKHFVLVHGVNHGAWC--WYKLKARLVAGGHRVTAV-------DLAASGINMKRIEDVHTFHAYSEPLMEVLASLP 75 (273)
Q Consensus 5 ~g~~~~~vv~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~-------d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~ 75 (273)
.|+.+..|+|++|-++-+.. -+.++..|.+. |.-+++ |.+||-++ .+..+---+.+.++...
T Consensus 433 rgs~qGkIlCf~GPPGVGKTSI~kSIA~ALnRk-FfRfSvGG~tDvAeIkGHRRT--------YVGAMPGkiIq~LK~v~ 503 (906)
T KOG2004|consen 433 RGSVQGKILCFVGPPGVGKTSIAKSIARALNRK-FFRFSVGGMTDVAEIKGHRRT--------YVGAMPGKIIQCLKKVK 503 (906)
T ss_pred cccCCCcEEEEeCCCCCCcccHHHHHHHHhCCc-eEEEeccccccHHhhccccee--------eeccCChHHHHHHHhhC
Confidence 35556789999998765544 46788888765 544433 56666544 34445455666677663
Q ss_pred CCCcEEEE------EechhHHHHHHHH-HHCCC--------------ccceeEEeecc
Q 024065 76 AEEKVILV------GHSLGGVTLALAA-DKFPH--------------KISVAVFVTAF 112 (273)
Q Consensus 76 ~~~~~~lv------G~S~Gg~~a~~~a-~~~p~--------------~v~~lil~~~~ 112 (273)
-..|++|+ |-+.=|--|..+. ...|+ .+.+++++|++
T Consensus 504 t~NPliLiDEvDKlG~g~qGDPasALLElLDPEQNanFlDHYLdVp~DLSkVLFicTA 561 (906)
T KOG2004|consen 504 TENPLILIDEVDKLGSGHQGDPASALLELLDPEQNANFLDHYLDVPVDLSKVLFICTA 561 (906)
T ss_pred CCCceEEeehhhhhCCCCCCChHHHHHHhcChhhccchhhhccccccchhheEEEEec
Confidence 33455554 5334343333332 22333 37788888865
No 479
>PF02502 LacAB_rpiB: Ribose/Galactose Isomerase; InterPro: IPR003500 This entry represents the sugar isomerase enzymes ribose 5-phosphate isomerase B (rpiB), galactose isomerase subunit A (LacA) and galactose isomerase subunit B (LacB). Galactose-6-phosphate isomerase (5.3.1.26 from EC) is a heteromultimeric protein consisting of subunits LacA and LacB, and catalyses the conversion of D-galactose 6-phosphate to D-tagatose and 6-phosphate in the tagatose 6-phosphate pathway of lactose catabolism []. Galactose-6-phosphate isomerase is induced by galactose or lactose. This entry represents the LacB subunit. Ribose 5-phosphate isomerase (5.3.1.6 from EC) forms a homodimer and catalyses the interconversion of D-ribose 5-phosphate and D-ribulose 5-phosphate in the non-oxidative branch of the pentose phosphate pathway. This reaction permits the synthesis of ribose from other sugars, as well as the recycling of sugars from nucleotide breakdown. Two unrelated enzymes can catalyse this reaction: RpiA (found in most organisms) and RpiB (found in some bacteria and eukaryotes). RpiB is also involved in metabolism of the rare sugar, allose, in addition to ribose sugars. The structures of RpiA and RpiB are distinct, RpiB having a Rossmann-type alpha/beta/alpha sandwich topology [].; GO: 0005975 carbohydrate metabolic process; PDB: 3HEE_A 3HE8_A 3PH3_B 3PH4_B 3ONO_A 4EM8_B 3S5P_B 1O1X_A 2BES_D 2VVP_D ....
Probab=27.79 E-value=2e+02 Score=19.57 Aligned_cols=73 Identities=22% Similarity=0.323 Sum_probs=40.0
Q ss_pred HHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCc-EEEEEechhHHHHHHHHHHCCCccc
Q 024065 26 YKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEK-VILVGHSLGGVTLALAADKFPHKIS 104 (273)
Q Consensus 26 ~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~lvG~S~Gg~~a~~~a~~~p~~v~ 104 (273)
..+.++|.+.||.|+=+-.- +.. ..++.+++..+...+..- ..+. +.+.|...|-.+ .|.++|. |.
T Consensus 15 ~~i~~~L~~~g~eV~D~G~~-----~~~---~~dy~~~a~~va~~V~~~-~~d~GIliCgtGiG~~i---aANK~~G-Ir 81 (140)
T PF02502_consen 15 EAIKEYLEEKGYEVIDFGTY-----SED---SVDYPDFAEKVAEAVASG-EADRGILICGTGIGMSI---AANKVPG-IR 81 (140)
T ss_dssp HHHHHHHHHTTEEEEEESES-----STS---T--HHHHHHHHHHHHHTT-SSSEEEEEESSSHHHHH---HHHTSTT---
T ss_pred HHHHHHHHHCCCEEEEeCCC-----CCC---CCCHHHHHHHHHHHHHcc-cCCeEEEEcCCChhhhh---HhhcCCC-EE
Confidence 46788899999977655432 111 247778888777777654 3333 444455555443 3556764 44
Q ss_pred eeEEeec
Q 024065 105 VAVFVTA 111 (273)
Q Consensus 105 ~lil~~~ 111 (273)
+.+..++
T Consensus 82 Aa~~~d~ 88 (140)
T PF02502_consen 82 AALCSDP 88 (140)
T ss_dssp EEE-SSH
T ss_pred EEeeCCH
Confidence 4444443
No 480
>PF03698 UPF0180: Uncharacterised protein family (UPF0180); InterPro: IPR005370 The members of this family are small uncharacterised proteins.
Probab=27.77 E-value=68 Score=19.32 Aligned_cols=20 Identities=20% Similarity=0.217 Sum_probs=16.4
Q ss_pred HHHHHHHHhhCCcEEEEecc
Q 024065 25 WYKLKARLVAGGHRVTAVDL 44 (273)
Q Consensus 25 ~~~~~~~l~~~g~~vi~~d~ 44 (273)
...+.+.|.++||.|+-++-
T Consensus 10 Ls~v~~~L~~~GyeVv~l~~ 29 (80)
T PF03698_consen 10 LSNVKEALREKGYEVVDLEN 29 (80)
T ss_pred chHHHHHHHHCCCEEEecCC
Confidence 45678899999999998873
No 481
>COG0426 FpaA Uncharacterized flavoproteins [Energy production and conversion]
Probab=27.73 E-value=3.5e+02 Score=22.30 Aligned_cols=81 Identities=14% Similarity=0.133 Sum_probs=46.6
Q ss_pred eEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEEec----
Q 024065 11 HFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHS---- 86 (273)
Q Consensus 11 ~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG~S---- 86 (273)
.|+..--++.+...-+.+++.|.+.|..|..+++.- . +..++++.+ ...+-+++|.+
T Consensus 250 ~l~Y~smyg~T~~ma~aiaegl~~~gv~v~~~~~~~--------------~----~~~eI~~~i-~~a~~~vvGsPT~~~ 310 (388)
T COG0426 250 DLIYDSMYGNTEKMAQAIAEGLMKEGVDVEVINLED--------------A----DPSEIVEEI-LDAKGLVVGSPTING 310 (388)
T ss_pred EEEEecccCCHHHHHHHHHHHhhhcCCceEEEEccc--------------C----CHHHHHHHH-hhcceEEEecCcccC
Confidence 344444455555556667777777777777776520 1 344444444 45677788877
Q ss_pred -----hhHHHHHHHHHHCCCccceeEEeecc
Q 024065 87 -----LGGVTLALAADKFPHKISVAVFVTAF 112 (273)
Q Consensus 87 -----~Gg~~a~~~a~~~p~~v~~lil~~~~ 112 (273)
++..+....+...+++. +.++++.
T Consensus 311 ~~~p~i~~~l~~v~~~~~~~k~--~~vfgS~ 339 (388)
T COG0426 311 GAHPPIQTALGYVLALAPKNKL--AGVFGSY 339 (388)
T ss_pred CCCchHHHHHHHHHhccCcCce--EEEEecc
Confidence 45556666666666554 4444543
No 482
>PRK06193 hypothetical protein; Provisional
Probab=27.66 E-value=92 Score=22.85 Aligned_cols=29 Identities=21% Similarity=0.228 Sum_probs=22.0
Q ss_pred chhhchHHHHHHHHhC-CCCCcEEEEEech
Q 024065 59 TFHAYSEPLMEVLASL-PAEEKVILVGHSL 87 (273)
Q Consensus 59 ~~~~~~~~l~~~l~~~-~~~~~~~lvG~S~ 87 (273)
+.+.+.+++..+++.+ ...+++.+|||..
T Consensus 136 ~~~~y~~~l~~~I~~l~~~~~~vLlVgHnp 165 (206)
T PRK06193 136 RNALLKAGLRPLLTTPPDPGTNTVLVGHDD 165 (206)
T ss_pred hHHHHHHHHHHHHhhCCCCCCeEEEEeCch
Confidence 4555668888888887 3456799999995
No 483
>PF11009 DUF2847: Protein of unknown function (DUF2847); InterPro: IPR022551 Members of this protein family, including YtxJ from Bacillus subtilis, occur in species that encode proteins for synthesizing bacillithiol. The protein is described as thioredoxin-like, while another bacillithiol-associated protein, YpdA (TIGR04018 from TIGRFAMS), is described as thioredoxin reductase-like. ; PDB: 3IV4_A.
Probab=27.65 E-value=1.6e+02 Score=18.85 Aligned_cols=34 Identities=29% Similarity=0.324 Sum_probs=23.1
Q ss_pred hHHHHHHHHhCCCCCcEEEEEechhHHHHHHHHHH
Q 024065 64 SEPLMEVLASLPAEEKVILVGHSLGGVTLALAADK 98 (273)
Q Consensus 64 ~~~l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~ 98 (273)
.+++.++++.- ..+++.|+=||.-+.+...+-.+
T Consensus 7 ~eql~~i~~~S-~~~~~~iFKHSt~C~IS~~a~~~ 40 (105)
T PF11009_consen 7 EEQLEEILEES-KEKPVLIFKHSTRCPISAMALRE 40 (105)
T ss_dssp HHHHHHHHHH----SEEEEEEE-TT-HHHHHHHHH
T ss_pred HHHHHHHHHhc-ccCcEEEEEeCCCChhhHHHHHH
Confidence 45677888876 67899999999999988776544
No 484
>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut
Probab=27.65 E-value=1.9e+02 Score=22.14 Aligned_cols=81 Identities=20% Similarity=0.149 Sum_probs=45.0
Q ss_pred EEEccCCCchhh-HHHHHHHHhhCC-------cEEEEeccCCCCCCCCCcCC----C---c-chhhchHHHHHHHHhCCC
Q 024065 13 VLVHGVNHGAWC-WYKLKARLVAGG-------HRVTAVDLAASGINMKRIED----V---H-TFHAYSEPLMEVLASLPA 76 (273)
Q Consensus 13 v~lhG~~~~~~~-~~~~~~~l~~~g-------~~vi~~d~~G~G~s~~~~~~----~---~-~~~~~~~~l~~~l~~~~~ 76 (273)
+++.|.|+..-. -+.+...+.+.| -+++.+|..|-=..+++... . + ....-..++.++++..
T Consensus 28 iv~~GAGsAg~gia~ll~~~~~~~Gls~e~A~~~i~~vD~~Gll~~~r~~l~~~~~~~~~~~~~~~~~~~L~eav~~~-- 105 (254)
T cd00762 28 VLFNGAGAAALGIANLIVXLXVKEGISKEEACKRIWXVDRKGLLVKNRKETCPNEYHLARFANPERESGDLEDAVEAA-- 105 (254)
T ss_pred EEEECcCHHHHHHHHHHHHHHHhcCCCHHHHhccEEEECCCCeEeCCCCccCHHHHHHHHHcCcccccCCHHHHHHhh--
Confidence 455566654433 334444444322 37999999884333222110 0 0 1111224677777766
Q ss_pred CCcEEEEEech-hHHHHHHHH
Q 024065 77 EEKVILVGHSL-GGVTLALAA 96 (273)
Q Consensus 77 ~~~~~lvG~S~-Gg~~a~~~a 96 (273)
++-+|+|-|- ||.+.-...
T Consensus 106 -kptvlIG~S~~~g~ft~evv 125 (254)
T cd00762 106 -KPDFLIGVSRVGGAFTPEVI 125 (254)
T ss_pred -CCCEEEEeCCCCCCCCHHHH
Confidence 7889999998 887655543
No 485
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=27.62 E-value=52 Score=24.95 Aligned_cols=18 Identities=28% Similarity=0.333 Sum_probs=15.7
Q ss_pred EEEEechhHHHHHHHHHH
Q 024065 81 ILVGHSLGGVTLALAADK 98 (273)
Q Consensus 81 ~lvG~S~Gg~~a~~~a~~ 98 (273)
.++|.|.||.+|+.++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 477999999999999876
No 486
>COG1485 Predicted ATPase [General function prediction only]
Probab=27.58 E-value=96 Score=24.94 Aligned_cols=12 Identities=8% Similarity=-0.053 Sum_probs=5.9
Q ss_pred EEEccCCCchhh
Q 024065 13 VLVHGVNHGAWC 24 (273)
Q Consensus 13 v~lhG~~~~~~~ 24 (273)
|+++|.-+.+..
T Consensus 68 lYl~GgVGrGKT 79 (367)
T COG1485 68 LYLWGGVGRGKT 79 (367)
T ss_pred EEEECCCCccHH
Confidence 556655444433
No 487
>COG1341 Predicted GTPase or GTP-binding protein [General function prediction only]
Probab=27.46 E-value=2.4e+02 Score=23.21 Aligned_cols=46 Identities=24% Similarity=0.286 Sum_probs=30.1
Q ss_pred CceEEEEccC-CCchhhH-HHHHHHHhhCCcEEEEeccCCCCCCCCCcC
Q 024065 9 EKHFVLVHGV-NHGAWCW-YKLKARLVAGGHRVTAVDLAASGINMKRIE 55 (273)
Q Consensus 9 ~~~vv~lhG~-~~~~~~~-~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~ 55 (273)
.++++++=|- .++...+ ..++..+.++|++|..+|. .-|.|+--++
T Consensus 72 ~~~~vmvvG~vDSGKSTLt~~LaN~~l~rG~~v~iiDa-DvGQ~ei~pP 119 (398)
T COG1341 72 KVGVVMVVGPVDSGKSTLTTYLANKLLARGRKVAIIDA-DVGQSEIGPP 119 (398)
T ss_pred CCcEEEEECCcCcCHHHHHHHHHHHHhhcCceEEEEeC-CCCCcccCCC
Confidence 4555666555 4444455 4677888888999999995 4666664433
No 488
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=27.43 E-value=1.6e+02 Score=19.40 Aligned_cols=14 Identities=43% Similarity=0.480 Sum_probs=10.6
Q ss_pred HHHHhhCCcEEEEe
Q 024065 29 KARLVAGGHRVTAV 42 (273)
Q Consensus 29 ~~~l~~~g~~vi~~ 42 (273)
...|.+.|++|+.+
T Consensus 100 ~~~L~~~Gw~Vlr~ 113 (117)
T TIGR00632 100 NSRLQELGWRVLRV 113 (117)
T ss_pred HHHHHHCcCEEEEE
Confidence 34677889999876
No 489
>PRK13230 nitrogenase reductase-like protein; Reviewed
Probab=27.38 E-value=1.4e+02 Score=22.94 Aligned_cols=40 Identities=18% Similarity=0.168 Sum_probs=27.6
Q ss_pred eEEEEccCCCchhh--HHHHHHHHhhCCcEEEEeccCCCCCCC
Q 024065 11 HFVLVHGVNHGAWC--WYKLKARLVAGGHRVTAVDLAASGINM 51 (273)
Q Consensus 11 ~vv~lhG~~~~~~~--~~~~~~~l~~~g~~vi~~d~~G~G~s~ 51 (273)
+|.+. |=|+.+.. --.++..|+++|++|+.+|+=-.|.+.
T Consensus 3 ~i~~~-gKGGVGKTT~a~nLA~~La~~G~rVLliD~Dpq~n~t 44 (279)
T PRK13230 3 KFCFY-GKGGIGKSTTVCNIAAALAESGKKVLVVGCDPKADCT 44 (279)
T ss_pred EEEEE-CCCCCcHHHHHHHHHHHHHhCCCEEEEEeeCCccccc
Confidence 45555 55544444 347888999999999999976555443
No 490
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=27.38 E-value=2.4e+02 Score=20.32 Aligned_cols=87 Identities=14% Similarity=0.130 Sum_probs=48.2
Q ss_pred ceEEEEccCCCchhhHHHHHH----HHhhCCcEEEEeccCC-CCCCCCC----------cCCCcchhhchHHHHHHHHhC
Q 024065 10 KHFVLVHGVNHGAWCWYKLKA----RLVAGGHRVTAVDLAA-SGINMKR----------IEDVHTFHAYSEPLMEVLASL 74 (273)
Q Consensus 10 ~~vv~lhG~~~~~~~~~~~~~----~l~~~g~~vi~~d~~G-~G~s~~~----------~~~~~~~~~~~~~l~~~l~~~ 74 (273)
-.||=..|.+..-.-|+.+++ .|.++|+.|.++=... ++..... ....-+.+.+.-|+..++..+
T Consensus 4 IaIiGtrGIPa~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~~~~~~~y~gv~l~~i~~~~~g~~~si~yd~~sl~~al 83 (185)
T PF09314_consen 4 IAIIGTRGIPARYGGFETFVEELAPRLVSKGIDVTVYCRSDYYPYKEFEYNGVRLVYIPAPKNGSAESIIYDFLSLLHAL 83 (185)
T ss_pred EEEEeCCCCCcccCcHHHHHHHHHHHHhcCCceEEEEEccCCCCCCCcccCCeEEEEeCCCCCCchHHHHHHHHHHHHHH
Confidence 345556777766666655544 5556677766654332 2222110 111124566777777766665
Q ss_pred C-------CCCcEEEEEechhHHHHHHHH
Q 024065 75 P-------AEEKVILVGHSLGGVTLALAA 96 (273)
Q Consensus 75 ~-------~~~~~~lvG~S~Gg~~a~~~a 96 (273)
. ..+-++++|.+.|+.+...+-
T Consensus 84 ~~~~~~~~~~~ii~ilg~~~g~~~~~~~r 112 (185)
T PF09314_consen 84 RFIKQDKIKYDIILILGYGIGPFFLPFLR 112 (185)
T ss_pred HHHhhccccCCEEEEEcCCccHHHHHHHH
Confidence 0 122466789998887766554
No 491
>PRK01906 tetraacyldisaccharide 4'-kinase; Provisional
Probab=27.00 E-value=1.9e+02 Score=23.20 Aligned_cols=43 Identities=23% Similarity=0.174 Sum_probs=28.1
Q ss_pred CceEEEEccC--CCchhh--HHHHHHHHhhCCcEEEEeccCCCCCCCC
Q 024065 9 EKHFVLVHGV--NHGAWC--WYKLKARLVAGGHRVTAVDLAASGINMK 52 (273)
Q Consensus 9 ~~~vv~lhG~--~~~~~~--~~~~~~~l~~~g~~vi~~d~~G~G~s~~ 52 (273)
.-|||.+-.+ |+++.. -..+++.|.++|+++..+- ||+|.+..
T Consensus 55 pvPVIsVGNitvGGTGKTP~v~~La~~l~~~G~~~~IlS-RGYg~~~~ 101 (338)
T PRK01906 55 GVPVVVVGNVTVGGTGKTPTVIALVDALRAAGFTPGVVS-RGYGAKIK 101 (338)
T ss_pred CCCEEEECCccCCCCChHHHHHHHHHHHHHcCCceEEEe-cCCCCCCC
Confidence 3467777554 333333 3567788888999876555 89998654
No 492
>PRK08105 flavodoxin; Provisional
Probab=26.99 E-value=2.1e+02 Score=19.62 Aligned_cols=6 Identities=0% Similarity=0.141 Sum_probs=2.7
Q ss_pred cEEEEE
Q 024065 79 KVILVG 84 (273)
Q Consensus 79 ~~~lvG 84 (273)
++.++|
T Consensus 86 ~~avfG 91 (149)
T PRK08105 86 RYGVIA 91 (149)
T ss_pred EEEEEe
Confidence 444443
No 493
>PRK05441 murQ N-acetylmuramic acid-6-phosphate etherase; Reviewed
Probab=26.83 E-value=1.2e+02 Score=23.72 Aligned_cols=34 Identities=24% Similarity=0.325 Sum_probs=23.2
Q ss_pred HHHHHHhCCCCCcEEEEEechhHHHHHHHHHHCC
Q 024065 67 LMEVLASLPAEEKVILVGHSLGGVTLALAADKFP 100 (273)
Q Consensus 67 l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p 100 (273)
+..+.+.+...++++++|....|.++...+...+
T Consensus 52 v~~~~~~l~~ggrI~~~GaGtSg~la~~da~e~~ 85 (299)
T PRK05441 52 VDAAAAALRQGGRLIYIGAGTSGRLGVLDASECP 85 (299)
T ss_pred HHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhCc
Confidence 3333444435578999999999999966665544
No 494
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=26.82 E-value=1.2e+02 Score=21.62 Aligned_cols=28 Identities=36% Similarity=0.476 Sum_probs=18.1
Q ss_pred EEccCCCchhhHHHHHHHHhhCCcEEEEecc
Q 024065 14 LVHGVNHGAWCWYKLKARLVAGGHRVTAVDL 44 (273)
Q Consensus 14 ~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~ 44 (273)
.+.|.|--+ ..++..|+++|++|+.+|.
T Consensus 4 ~ViGlGyvG---l~~A~~lA~~G~~V~g~D~ 31 (185)
T PF03721_consen 4 AVIGLGYVG---LPLAAALAEKGHQVIGVDI 31 (185)
T ss_dssp EEE--STTH---HHHHHHHHHTTSEEEEE-S
T ss_pred EEECCCcch---HHHHHHHHhCCCEEEEEeC
Confidence 344555333 4667788999999999995
No 495
>COG1832 Predicted CoA-binding protein [General function prediction only]
Probab=26.77 E-value=1.5e+02 Score=20.18 Aligned_cols=31 Identities=26% Similarity=0.232 Sum_probs=22.8
Q ss_pred EEccCCCchhhH-HHHHHHHhhCCcEEEEecc
Q 024065 14 LVHGVNHGAWCW-YKLKARLVAGGHRVTAVDL 44 (273)
Q Consensus 14 ~lhG~~~~~~~~-~~~~~~l~~~g~~vi~~d~ 44 (273)
-+=|+..+..-+ ......|.++||+|+-++.
T Consensus 20 AvVG~S~~P~r~sy~V~kyL~~~GY~ViPVNP 51 (140)
T COG1832 20 AVVGASDKPDRPSYRVAKYLQQKGYRVIPVNP 51 (140)
T ss_pred EEEecCCCCCccHHHHHHHHHHCCCEEEeeCc
Confidence 334666666555 4677889999999998886
No 496
>PRK05665 amidotransferase; Provisional
Probab=26.72 E-value=1e+02 Score=23.24 Aligned_cols=37 Identities=27% Similarity=0.257 Sum_probs=25.2
Q ss_pred chhhchHHHHHHHHhCCCCCcEEEEEechhHHHHHHHH
Q 024065 59 TFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAA 96 (273)
Q Consensus 59 ~~~~~~~~l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~a 96 (273)
.-..|...+.++++.. -....-++|.++|..+...+.
T Consensus 72 ~~~pwi~~l~~~i~~~-~~~~~PilGIC~GhQlla~Al 108 (240)
T PRK05665 72 GTDPWIQTLKTYLLKL-YERGDKLLGVCFGHQLLALLL 108 (240)
T ss_pred ccchHHHHHHHHHHHH-HhcCCCEEEEeHHHHHHHHHh
Confidence 3456667777777765 333455899999998765554
No 497
>COG0337 AroB 3-dehydroquinate synthetase [Amino acid transport and metabolism]
Probab=26.70 E-value=3.5e+02 Score=22.01 Aligned_cols=66 Identities=20% Similarity=0.223 Sum_probs=37.0
Q ss_pred eEEEEccCCCchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhCCCCCcEEEEE
Q 024065 11 HFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVG 84 (273)
Q Consensus 11 ~vv~lhG~~~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG 84 (273)
.+++++--.-.......+...|.+.|+.+..+..|. |++ .-+++.+.+-...+++.- -.++-.++|
T Consensus 35 k~~ivtd~~v~~~y~~~~~~~l~~~g~~v~~~~lp~-GE~------~Ksl~~~~~i~~~ll~~~-~~R~s~iia 100 (360)
T COG0337 35 KVAIVTDETVAPLYLEKLLATLEAAGVEVDSIVLPD-GEE------YKSLETLEKIYDALLEAG-LDRKSTLIA 100 (360)
T ss_pred eEEEEECchhHHHHHHHHHHHHHhcCCeeeEEEeCC-Ccc------cccHHHHHHHHHHHHHcC-CCCCcEEEE
Confidence 455555544444445677788888899887777763 221 125544444444444443 445555554
No 498
>cd06292 PBP1_LacI_like_10 Ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. This group includes the ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.
Probab=26.68 E-value=2.8e+02 Score=20.81 Aligned_cols=18 Identities=22% Similarity=0.102 Sum_probs=8.9
Q ss_pred HHHHHHHHhhCCcEEEEe
Q 024065 25 WYKLKARLVAGGHRVTAV 42 (273)
Q Consensus 25 ~~~~~~~l~~~g~~vi~~ 42 (273)
.....+.|..++..-+.+
T Consensus 44 ~~~~i~~l~~~~vdgiIi 61 (273)
T cd06292 44 EADYVEDLLARGVRGVVF 61 (273)
T ss_pred HHHHHHHHHHcCCCEEEE
Confidence 334455555555554444
No 499
>cd01406 SIR2-like Sir2-like: Prokaryotic group of uncharacterized Sir2-like proteins which lack certain key catalytic residues and conserved zinc binding cysteines; and are members of the SIR2 superfamily of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation.
Probab=26.56 E-value=62 Score=24.24 Aligned_cols=29 Identities=21% Similarity=0.211 Sum_probs=18.0
Q ss_pred HHHHHHhCCCCCcEEEEEechhHHHHHHH
Q 024065 67 LMEVLASLPAEEKVILVGHSLGGVTLALA 95 (273)
Q Consensus 67 l~~~l~~~~~~~~~~lvG~S~Gg~~a~~~ 95 (273)
+..+++.+-....+.++|+|+.=.-...+
T Consensus 169 ~~~~l~~ll~~~~~LFiG~S~~D~~i~~l 197 (242)
T cd01406 169 ATKFLKSDLEKYTVLFIGYSLTDPNIRYL 197 (242)
T ss_pred HHHHHHHHHhcCcEEEEEcCCCCCcHHHH
Confidence 34445554245789999999885543333
No 500
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=26.55 E-value=1.4e+02 Score=23.38 Aligned_cols=55 Identities=15% Similarity=0.079 Sum_probs=0.0
Q ss_pred CchhhHHHHHHHHhhCCcEEEEeccCCCCCCCCCcCCCcchhhchHHHHHHHHhC
Q 024065 20 HGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASL 74 (273)
Q Consensus 20 ~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~~ 74 (273)
++.+.-...+++|.++|+.|+.+.+|-.........-..+...-.+|+..+++.+
T Consensus 352 Gda~lA~~~ad~lLk~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af 406 (417)
T KOG1359|consen 352 GDARLASKMADELLKRGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAF 406 (417)
T ss_pred ccHHHHHHHHHHHHhcCceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHH
Done!