BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024066
(273 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SUC0|3HIDH_ARATH Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial
OS=Arabidopsis thaliana GN=At4g20930 PE=2 SV=3
Length = 347
Score = 448 bits (1152), Expect = e-125, Method: Compositional matrix adjust.
Identities = 209/273 (76%), Positives = 242/273 (88%)
Query: 1 MFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSST 60
MF++MGV ++ETP+EVA+ S+VVITMLPSSSHV+DVY G NGLL G N +RP L IDSST
Sbjct: 75 MFTEMGVSSRETPYEVAQDSEVVITMLPSSSHVMDVYTGTNGLLLGENDIRPALFIDSST 134
Query: 61 IDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQA 120
IDPQT+R IS AVSNC LKEK+D+WE PVMLDAPVSGGVLAAEAGTLTFMVGG EDAY A
Sbjct: 135 IDPQTTRKISLAVSNCNLKEKRDNWEKPVMLDAPVSGGVLAAEAGTLTFMVGGPEDAYLA 194
Query: 121 AKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKIL 180
A+P+ SMG+ +IYCGG+GNG+AAKICNNL MAVSMLG SEAL LGQSLGISASTLT++L
Sbjct: 195 ARPILQSMGRTSIYCGGSGNGSAAKICNNLAMAVSMLGTSEALALGQSLGISASTLTEVL 254
Query: 181 NSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTS 240
N+SS RCWSSD+YNPVPGVM+GVP+SR+Y GGFASKLMAKDLNLA ASA+EVG PL S
Sbjct: 255 NTSSGRCWSSDAYNPVPGVMKGVPSSRDYNGGFASKLMAKDLNLAAASAEEVGHKSPLIS 314
Query: 241 QAQDIYAKLCENGHDSKDFSCVFQHYYGGKDEV 273
+AQ+IY K+CE GH++KDFSCVF+H+Y GKDEV
Sbjct: 315 KAQEIYKKMCEEGHETKDFSCVFRHFYNGKDEV 347
>sp|Q99L13|3HIDH_MOUSE 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Mus musculus
GN=Hibadh PE=2 SV=1
Length = 335
Score = 257 bits (657), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 136/264 (51%), Positives = 170/264 (64%), Gaps = 12/264 (4%)
Query: 2 FSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTI 61
F + G +P EVAE +D +ITMLPSS + ++VY+G NG+L+ + LLIDSSTI
Sbjct: 77 FKEAGEQVASSPAEVAEKADRIITMLPSSMNAVEVYSGANGILK--KVKKGSLLIDSSTI 134
Query: 62 DPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAA 121
DP S+ ++ V EK + V +DAPVSGGV AA +G LTFMVGG ED + AA
Sbjct: 135 DPSVSKELAKEV------EKMGA----VFMDAPVSGGVGAARSGNLTFMVGGVEDEFAAA 184
Query: 122 KPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILN 181
+ L MG N +YCG G G +AKICNN+ +A+SM+G +EA+ LG G+ L KILN
Sbjct: 185 QELLECMGSNVVYCGAVGTGQSAKICNNMLLAISMIGTAEAMNLGIRSGLDPKLLAKILN 244
Query: 182 SSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQ 241
SS RCWSSD+YNPVPGVM GVP+S NY GGF + LMAKDL LA SA L S
Sbjct: 245 MSSGRCWSSDTYNPVPGVMHGVPSSNNYQGGFGTTLMAKDLGLAQDSATSTKTPILLGSL 304
Query: 242 AQDIYAKLCENGHDSKDFSCVFQH 265
A IY +C G+ KDFS VFQ+
Sbjct: 305 AHQIYRMMCSKGYSKKDFSSVFQY 328
>sp|Q2HJD7|3HIDH_BOVIN 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Bos taurus
GN=HIBADH PE=2 SV=1
Length = 336
Score = 256 bits (655), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 136/264 (51%), Positives = 171/264 (64%), Gaps = 12/264 (4%)
Query: 2 FSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTI 61
F D G +P +VAE +D +ITMLP+S + ++ Y+G NG+L+ + LLIDSSTI
Sbjct: 78 FLDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGILK--KVKKGSLLIDSSTI 135
Query: 62 DPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAA 121
DP S+ ++ V EK + V +DAPVSGGV AA +G LTFMVGG E+ + AA
Sbjct: 136 DPMVSKELAKEV------EKMGA----VFMDAPVSGGVGAARSGNLTFMVGGVEEEFAAA 185
Query: 122 KPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILN 181
+ L MG N +YCG G G AAKICNNL +A+SM+G +EA+ LG LG+ L KILN
Sbjct: 186 QELLGCMGSNVVYCGAVGTGQAAKICNNLLLAISMIGTAEAMNLGIRLGLDPKLLAKILN 245
Query: 182 SSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQ 241
SS RCWSSD+YNPVPGVM+GVP++ NY GGF + LMAKDL LA SA L SQ
Sbjct: 246 MSSGRCWSSDTYNPVPGVMDGVPSANNYQGGFGTTLMAKDLGLAQDSATSTKSPILLGSQ 305
Query: 242 AQDIYAKLCENGHDSKDFSCVFQH 265
A IY +C G+ KDFS VFQ
Sbjct: 306 AHQIYRMMCAKGYSKKDFSSVFQF 329
>sp|Q5R5E7|3HIDH_PONAB 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Pongo abelii
GN=HIBADH PE=2 SV=1
Length = 336
Score = 255 bits (651), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 135/264 (51%), Positives = 170/264 (64%), Gaps = 12/264 (4%)
Query: 2 FSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTI 61
F D G +P +VAE +D +ITMLP+S + ++ Y+G NG+L+ + LLIDSSTI
Sbjct: 78 FQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGILK--KVKKGSLLIDSSTI 135
Query: 62 DPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAA 121
DP S+ ++ V EK + V +DAPVSGGV AA +G LTFMVGG ED + AA
Sbjct: 136 DPAVSKELAKEV------EKMGA----VFMDAPVSGGVGAARSGNLTFMVGGVEDEFAAA 185
Query: 122 KPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILN 181
+ L MG N +YCG G G AAKICNN+ +A+SM+G +EA+ LG LG+ L KILN
Sbjct: 186 QELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLDPKLLAKILN 245
Query: 182 SSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQ 241
SS RCWSSD+YNPVPGVM+GVP++ NY GGF + LMAKDL LA SA L S
Sbjct: 246 MSSGRCWSSDTYNPVPGVMDGVPSANNYQGGFGATLMAKDLGLAQDSATSTKSPILLGSL 305
Query: 242 AQDIYAKLCENGHDSKDFSCVFQH 265
A IY +C G+ KDFS VFQ
Sbjct: 306 AHQIYRMMCAKGYSKKDFSSVFQF 329
>sp|P31937|3HIDH_HUMAN 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Homo sapiens
GN=HIBADH PE=1 SV=2
Length = 336
Score = 254 bits (650), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 135/264 (51%), Positives = 170/264 (64%), Gaps = 12/264 (4%)
Query: 2 FSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTI 61
F D G +P +VAE +D +ITMLP+S + ++ Y+G NG+L+ + LLIDSSTI
Sbjct: 78 FQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGILK--KVKKGSLLIDSSTI 135
Query: 62 DPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAA 121
DP S+ ++ V EK + V +DAPVSGGV AA +G LTFMVGG ED + AA
Sbjct: 136 DPAVSKELAKEV------EKMGA----VFMDAPVSGGVGAARSGNLTFMVGGVEDEFAAA 185
Query: 122 KPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILN 181
+ L MG N +YCG G G AAKICNN+ +A+SM+G +EA+ LG LG+ L KILN
Sbjct: 186 QELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLDPKLLAKILN 245
Query: 182 SSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQ 241
SS RCWSSD+YNPVPGVM+GVP++ NY GGF + LMAKDL LA SA L S
Sbjct: 246 MSSGRCWSSDTYNPVPGVMDGVPSANNYQGGFGTTLMAKDLGLAQDSATSTKSPILLGSL 305
Query: 242 AQDIYAKLCENGHDSKDFSCVFQH 265
A IY +C G+ KDFS VFQ
Sbjct: 306 AHQIYRMMCAKGYSKKDFSSVFQF 329
>sp|P29266|3HIDH_RAT 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Rattus
norvegicus GN=Hibadh PE=1 SV=3
Length = 335
Score = 253 bits (646), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 134/264 (50%), Positives = 172/264 (65%), Gaps = 12/264 (4%)
Query: 2 FSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTI 61
F + G +P +VAE +D +ITMLPSS + ++VY+G NG+L+ + LLIDSSTI
Sbjct: 77 FKEAGEQVASSPADVAEKADRIITMLPSSMNSIEVYSGANGILK--KVKKGSLLIDSSTI 134
Query: 62 DPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAA 121
DP S+ ++ V EK + V +DAPVSGGV AA +G LTFMVGG E+ + AA
Sbjct: 135 DPSVSKELAKEV------EKMGA----VFMDAPVSGGVGAARSGNLTFMVGGVENEFAAA 184
Query: 122 KPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILN 181
+ L MG N +YCG G+G +AKICNN+ +A+SM+G +EA+ LG G+ L KILN
Sbjct: 185 QELLGCMGSNVLYCGAVGSGQSAKICNNMLLAISMIGTAEAMNLGIRSGLDPKLLAKILN 244
Query: 182 SSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQ 241
SS RCWSSD+YNPVPGVM+GVP+S NY GGF + LMAKDL LA SA L S
Sbjct: 245 MSSGRCWSSDTYNPVPGVMDGVPSSNNYQGGFGTTLMAKDLGLAQDSATSTKTPILLGSV 304
Query: 242 AQDIYAKLCENGHDSKDFSCVFQH 265
A IY +C G+ KDFS VFQ+
Sbjct: 305 AHQIYRMMCSKGYSKKDFSSVFQY 328
>sp|Q54CX6|3HIDH_DICDI Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial
OS=Dictyostelium discoideum GN=hibA PE=3 SV=1
Length = 321
Score = 230 bits (587), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 130/263 (49%), Positives = 167/263 (63%), Gaps = 14/263 (5%)
Query: 2 FSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRP-QLLIDSST 60
+ G +P EVA+ +DV++TMLP+S+HV +VY G NG+ Q +VRP LL+DSST
Sbjct: 61 LKEKGAKIANSPAEVAKEADVIVTMLPASAHVKNVYCGENGIFQ---TVRPGTLLLDSST 117
Query: 61 IDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQA 120
IDP T+R +++ I K+ + + MLD PVSGG AEAGTLTFMVGGSE +
Sbjct: 118 IDPATAREVAS-----IAKKHQST-----MLDCPVSGGTGGAEAGTLTFMVGGSEQDFNT 167
Query: 121 AKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKIL 180
AK MGKN ++CG G G AK+CNNL + +SM+ VSEA+ LG G+ L I
Sbjct: 168 AKTYLECMGKNIVHCGDVGTGQVAKVCNNLVLGISMIAVSEAMNLGVKQGMDPKKLAGIF 227
Query: 181 NSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTS 240
N+SSARCW+S+ YNP PGV+E PASR Y GGF S LM KDL LA+ SAK +G L +
Sbjct: 228 NTSSARCWTSELYNPCPGVIETSPASRGYTGGFGSALMTKDLGLAVDSAKSIGEPLLLGN 287
Query: 241 QAQDIYAKLCENGHDSKDFSCVF 263
A +Y L G KDFS V+
Sbjct: 288 SAHQLYTLLVAKGDGQKDFSVVY 310
>sp|Q9V8M5|3HIDH_DROME Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial
OS=Drosophila melanogaster GN=CG15093 PE=2 SV=2
Length = 324
Score = 202 bits (515), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/249 (45%), Positives = 151/249 (60%), Gaps = 14/249 (5%)
Query: 15 EVAEASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVS 74
E+A+ SD VITMLP+++ V Y+ G N + + IDSSTI P +++
Sbjct: 80 ELAKNSDFVITMLPNNAIVDASYDEMTA--DGVN--KDTIFIDSSTISPDLVKSL----- 130
Query: 75 NCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPLFLSMGKNTIY 134
+KK S + +DAPVSGGV AE TLTFMVGG+E Y A K + MGK +
Sbjct: 131 -----QKKISAKGARFIDAPVSGGVPGAEQATLTFMVGGTEAEYNAVKAVLECMGKKITH 185
Query: 135 CGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYN 194
CG G G AAK+CNN+ +A+SM+GVSEA+ L G+ A+ +I+NSS+ RCW+S+ YN
Sbjct: 186 CGVYGMGQAAKLCNNMMLAISMIGVSEAMNLAVRQGLDANVFAEIINSSTGRCWASEIYN 245
Query: 195 PVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGH 254
PVPGV PA+R+Y GGF+S L+ KDL LA A PL S A +Y LC+ G
Sbjct: 246 PVPGVCPSAPANRDYAGGFSSALITKDLGLASGVANASNSPIPLGSLAHKVYQSLCDKGL 305
Query: 255 DSKDFSCVF 263
+KDFS V+
Sbjct: 306 GNKDFSVVY 314
>sp|Q9XTI0|3HIDH_CAEEL Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial
OS=Caenorhabditis elegans GN=B0250.5 PE=3 SV=1
Length = 299
Score = 201 bits (510), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 110/248 (44%), Positives = 154/248 (62%), Gaps = 16/248 (6%)
Query: 20 SDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRP-QLLIDSSTIDPQTSRNISAAVSNCIL 78
S +IT+LPSS HV VY G G+ + +++P L +DSSTID S ++ A + +L
Sbjct: 58 SKEIITVLPSSPHVKAVYQGEAGIFK---TIQPGTLCMDSSTIDQIVSLEVAQAAA--LL 112
Query: 79 KEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDA-YQAAKPLFLSMGKNTIYCGG 137
K + +DAP+SGGV A+ TLTFMVG DA ++ A+ + MGKN + G
Sbjct: 113 KAE--------YIDAPISGGVTGAQQATLTFMVGAGNDATFKRAEAVLSLMGKNIVNLGA 164
Query: 138 AGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYNPVP 197
GNG AAKICNN+ + + M+ V+E + LG S+G+ A L I+N+SS RCWSSD+YNPVP
Sbjct: 165 VGNGTAAKICNNMLLGIQMVAVAETMNLGISMGLDAKALAGIVNTSSGRCWSSDTYNPVP 224
Query: 198 GVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCEN-GHDS 256
GV+E +P+ R Y GGF + LMAKDL+LA ++ P+ S A IY L + + +
Sbjct: 225 GVIENIPSCRGYAGGFGTTLMAKDLSLAQNASTNTQAPTPMGSLAHQIYRILARDPQYQA 284
Query: 257 KDFSCVFQ 264
KDF V+Q
Sbjct: 285 KDFGVVYQ 292
>sp|P28811|MMSB_PSEAE 3-hydroxyisobutyrate dehydrogenase OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=mmsB PE=2 SV=1
Length = 298
Score = 189 bits (479), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 108/270 (40%), Positives = 157/270 (58%), Gaps = 15/270 (5%)
Query: 4 DMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDP 63
+ G ++ + E ++VVI+MLP+ HV +Y G +GLL LLID STI P
Sbjct: 42 EQGAQGADSALQCCEGAEVVISMLPAGQHVESLYLGDDGLL--ARVAGKPLLIDCSTIAP 99
Query: 64 QTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKP 123
+T+R ++ A + L +LDAPVSGGV A AGTL+F+VGG + + A+P
Sbjct: 100 ETARKVAEAAAAKGL----------TLLDAPVSGGVGGARAGTLSFIVGGPAEGFARARP 149
Query: 124 LFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSS 183
+ +MG+N + G G G AKICNN+ + + M G +EAL LG G+ + L++++ S
Sbjct: 150 VLENMGRNIFHAGDHGAGQVAKICNNMLLGILMAGTAEALALGVKNGLDPAVLSEVMKQS 209
Query: 184 SARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQ 243
S W+ + YNP PGVM PAS Y GGF +LM KDL LALA+A+ V PL + A+
Sbjct: 210 SGGNWALNLYNPWPGVMPQAPASNGYAGGFQVRLMNKDLGLALANAQAVQASTPLGALAR 269
Query: 244 DIYA--KLCENGHDSKDFSCVFQHYYGGKD 271
++++ + H+ DFS + Q Y GKD
Sbjct: 270 NLFSLHAQADAEHEGLDFSSI-QKLYRGKD 298
>sp|P63935|MMSB_MYCTU Probable 3-hydroxyisobutyrate dehydrogenase OS=Mycobacterium
tuberculosis GN=mmsB PE=3 SV=1
Length = 294
Score = 161 bits (408), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/263 (40%), Positives = 141/263 (53%), Gaps = 19/263 (7%)
Query: 10 KETPFEVAEASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRP-QLLIDSSTIDPQTSRN 68
+ P VAEA DVVITMLP+ V Y +L + RP L IDSSTI +R
Sbjct: 49 RSAPEAVAEA-DVVITMLPTGEVVRRCYTD---VLA---AARPATLFIDSSTISVTDARE 101
Query: 69 ISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPLFLSM 128
+ A L E + LDAPVSGGV A A TL FMVGG E + A+P+ M
Sbjct: 102 VHA------LAESHGMLQ----LDAPVSGGVKGAAAATLAFMVGGDESTLRRARPVLEPM 151
Query: 129 GKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCW 188
I+CG AG G AAK+CNN+ +AV + ++EA L + LG+SA +L ++ ++ CW
Sbjct: 152 AGKIIHCGAAGAGQAAKVCNNMVLAVQQIAIAEAFVLAEKLGLSAQSLFDVITGATGNCW 211
Query: 189 SSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAK 248
+ + PVPG + PA+ ++ GF++ LM KDL LA+ + G PL S A DIYAK
Sbjct: 212 AVHTNCPVPGPVPTSPANNDFKPGFSTALMNKDLGLAMDAVAATGATAPLGSHAADIYAK 271
Query: 249 LCENGHDSKDFSCVFQHYYGGKD 271
+ H DFS V D
Sbjct: 272 FAAD-HADLDFSAVIHTLRARAD 293
>sp|P63936|MMSB_MYCBO Probable 3-hydroxyisobutyrate dehydrogenase OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=mmsB PE=3 SV=1
Length = 294
Score = 161 bits (408), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/263 (40%), Positives = 141/263 (53%), Gaps = 19/263 (7%)
Query: 10 KETPFEVAEASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRP-QLLIDSSTIDPQTSRN 68
+ P VAEA DVVITMLP+ V Y +L + RP L IDSSTI +R
Sbjct: 49 RSAPEAVAEA-DVVITMLPTGEVVRRCYTD---VLA---AARPATLFIDSSTISVTDARE 101
Query: 69 ISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPLFLSM 128
+ A L E + LDAPVSGGV A A TL FMVGG E + A+P+ M
Sbjct: 102 VHA------LAESHGMLQ----LDAPVSGGVKGAAAATLAFMVGGDESTLRRARPVLEPM 151
Query: 129 GKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCW 188
I+CG AG G AAK+CNN+ +AV + ++EA L + LG+SA +L ++ ++ CW
Sbjct: 152 AGKIIHCGAAGAGQAAKVCNNMVLAVQQIAIAEAFVLAEKLGLSAQSLFDVITGATGNCW 211
Query: 189 SSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAK 248
+ + PVPG + PA+ ++ GF++ LM KDL LA+ + G PL S A DIYAK
Sbjct: 212 AVHTNCPVPGPVPTSPANNDFKPGFSTALMNKDLGLAMDAVAATGATAPLGSHAADIYAK 271
Query: 249 LCENGHDSKDFSCVFQHYYGGKD 271
+ H DFS V D
Sbjct: 272 FAAD-HADLDFSAVIHTLRARAD 293
>sp|O34948|YKWC_BACSU Uncharacterized oxidoreductase YkwC OS=Bacillus subtilis (strain
168) GN=ykwC PE=3 SV=1
Length = 288
Score = 142 bits (359), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/261 (33%), Positives = 141/261 (54%), Gaps = 19/261 (7%)
Query: 6 GVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQT 65
G K+T ++++ +DV+ITM+ S V +VY G NG+++ N+ LID +T P
Sbjct: 45 GAIWKDTVKDLSKEADVIITMVGYPSDVEEVYFGSNGIIE--NAKEGAYLIDMTTSKPSL 102
Query: 66 SRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPLF 125
++ I+ A L LDAPVSGG + A+ GTL MVGG ++A++A P+F
Sbjct: 103 AKKIAEAAKEKAL----------FALDAPVSGGDIGAQNGTLAIMVGGEKEAFEACMPIF 152
Query: 126 LSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSA 185
MG+N Y G AG+G K+CN + +A M+GV+EA+ Q G+ + K + + +A
Sbjct: 153 SLMGENIQYQGPAGSGQHTKMCNQIAIAAGMIGVAEAMAYAQKSGLEPENVLKSITTGAA 212
Query: 186 RCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDI 245
WS N P +++G N+ GF K KD+ +AL A+ +G + P S A+ +
Sbjct: 213 GSWSLS--NLAPRMLQG-----NFEPGFYVKHFIKDMGIALEEAELMGEEMPGLSLAKSL 265
Query: 246 YAKLCENGHDSKDFSCVFQHY 266
Y KL G ++ +++ +
Sbjct: 266 YDKLAAQGEENSGTQSIYKLW 286
>sp|Q0QLF5|HMGD_EUBBA 2-(hydroxymethyl)glutarate dehydrogenase OS=Eubacterium barkeri
GN=Hgd PE=1 SV=1
Length = 301
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/253 (35%), Positives = 135/253 (53%), Gaps = 20/253 (7%)
Query: 15 EVAEASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVS 74
+VA ASD++ T LP++ V V NGP G+L + +++D S++ P ++
Sbjct: 56 KVAAASDIIFTSLPNAGIVETVMNGPGGVLSACKA--GTVIVDMSSVSPSST-------- 105
Query: 75 NCILKEKKDSWENPV-MLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPLFLSMGKNTI 133
LK K + E + +DAPVSGG AEAGTLT MVG SE ++ +P+ +GK+
Sbjct: 106 ---LKMAKVAAEKGIDYVDAPVSGGTKGAEAGTLTIMVGASEAVFEKIQPVLSVIGKDIY 162
Query: 134 YCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSY 193
+ G G G A KI NNL + +M ++EAL LG G+ T+ +I+ SS R ++ ++
Sbjct: 163 HVGDTGAGDAVKIVNNLLLGCNMASLAEALVLGVKCGLKPETMQEIIGKSSGRSYAMEAK 222
Query: 194 NPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENG 253
ME S ++ GGFA L KDL LAL + KE V P+T+ A I+ G
Sbjct: 223 ------MEKFIMSGDFAGGFAMDLQHKDLGLALEAGKEGNVPLPMTAMATQIFEGGRAMG 276
Query: 254 HDSKDFSCVFQHY 266
+D S V + +
Sbjct: 277 LGREDMSAVIKVW 289
>sp|P77161|GLXR_ECOLI 2-hydroxy-3-oxopropionate reductase OS=Escherichia coli (strain
K12) GN=glxR PE=2 SV=1
Length = 292
Score = 127 bits (320), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 130/262 (49%), Gaps = 23/262 (8%)
Query: 5 MGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQ 64
+G + ET +V EASD++ M+P + V +V G NG + S++ + ++D S+I P
Sbjct: 41 LGAVSVETARQVTEASDIIFIMVPDTPQVEEVLFGENGCTKA--SLKGKTIVDMSSISPI 98
Query: 65 TSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPL 124
++ + V+ E + LDAPVSGG + A GTL+ MVGG E ++ KPL
Sbjct: 99 ETKRFARQVN-----ELGGDY-----LDAPVSGGEIGAREGTLSIMVGGDEAVFERVKPL 148
Query: 125 FLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKIL--NS 182
F +GKN GG G+G K+ N + +A+++ VSEAL G + + L
Sbjct: 149 FELLGKNITLVGGNGDGQTCKVANQIIVALNIEAVSEALLFASKAGADPVRVRQALMGGF 208
Query: 183 SSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQA 242
+S+R + R + GF L KDLNLAL SAK + ++ P T+
Sbjct: 209 ASSRILEVHGERMI---------KRTFNPGFKIALHQKDLNLALQSAKALALNLPNTATC 259
Query: 243 QDIYAKLCENGHDSKDFSCVFQ 264
Q+++ NG D S + Q
Sbjct: 260 QELFNTCAANGGSQLDHSALVQ 281
>sp|P0ABQ2|GARR_ECOLI 2-hydroxy-3-oxopropionate reductase OS=Escherichia coli (strain
K12) GN=garR PE=1 SV=1
Length = 294
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 134/262 (51%), Gaps = 21/262 (8%)
Query: 6 GVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRP-QLLIDSSTIDPQ 64
G T T +AE DV+ITMLP+S HV +V G NG+++G +P +LID S+I P
Sbjct: 43 GAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGIIEGA---KPGTVLIDMSSIAPL 99
Query: 65 TSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPL 124
SR IS A LK K MLDAPVSGG A GTL+ MVGG + + L
Sbjct: 100 ASREISEA-----LKAKGID-----MLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDL 149
Query: 125 FLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSS 184
+M + ++ G G G K+ N + +A+++ +SEALTL G++ + + +
Sbjct: 150 MKAMAGSVVHTGEIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRGGL 209
Query: 185 ARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQD 244
A D+ P+ VM+ RN+ GF L KDL AL ++ VG PLT+ +
Sbjct: 210 AGSTVLDAKAPM--VMD-----RNFKPGFRIDLHIKDLANALDTSHGVGAQLPLTAAVME 262
Query: 245 IYAKLCENGHDSKDFSCVFQHY 266
+ L +G + D S + +Y
Sbjct: 263 MMQALRADGLGTADHSALACYY 284
>sp|P0ABQ3|GARR_ECOL6 2-hydroxy-3-oxopropionate reductase OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=garR PE=3 SV=1
Length = 294
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 134/262 (51%), Gaps = 21/262 (8%)
Query: 6 GVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRP-QLLIDSSTIDPQ 64
G T T +AE DV+ITMLP+S HV +V G NG+++G +P +LID S+I P
Sbjct: 43 GAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGIIEGA---KPGTVLIDMSSIAPL 99
Query: 65 TSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPL 124
SR IS A LK K MLDAPVSGG A GTL+ MVGG + + L
Sbjct: 100 ASREISEA-----LKAKGID-----MLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDL 149
Query: 125 FLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSS 184
+M + ++ G G G K+ N + +A+++ +SEALTL G++ + + +
Sbjct: 150 MKAMAGSVVHTGEIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRGGL 209
Query: 185 ARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQD 244
A D+ P+ VM+ RN+ GF L KDL AL ++ VG PLT+ +
Sbjct: 210 AGSTVLDAKAPM--VMD-----RNFKPGFRIDLHIKDLANALDTSHGVGAQLPLTAAVME 262
Query: 245 IYAKLCENGHDSKDFSCVFQHY 266
+ L +G + D S + +Y
Sbjct: 263 MMQALRADGLGTADHSALACYY 284
>sp|Q9SZE1|3HID1_ARATH Probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial
OS=Arabidopsis thaliana GN=At4g29120 PE=2 SV=1
Length = 334
Score = 107 bits (268), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 120/256 (46%), Gaps = 29/256 (11%)
Query: 4 DMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGP-----NGLLQGGNSVRPQLLIDS 58
DMG ++P VAE SDVV T++ S V V P +GL QGG +L+D
Sbjct: 78 DMGANVADSPNSVAEQSDVVFTIVGYPSDVRHVLLDPKSGALSGLRQGG------VLVDM 131
Query: 59 STIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAY 118
+T +P + I+ A S ++N +DAPVSGG L A+ G L+ GG E
Sbjct: 132 TTSEPSLAEEIAKAAS----------FKNCFSIDAPVSGGDLGAKNGKLSIFAGGDETTV 181
Query: 119 QAAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTK 178
+ PLF MGK + G +G G AK+ N +T+A +MLG+ E L G+ +
Sbjct: 182 KRLDPLFSLMGKVN-FMGTSGKGQFAKLANQITIASTMLGLVEGLIYAHKAGLDVKKFLE 240
Query: 179 ILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPL 238
+++ +A S D Y R++ GF KDL + L + +G+ P
Sbjct: 241 AISTGAAGSKSIDLYGD-------RILKRDFDPGFYVNHFVKDLGICLNECQRMGLALPG 293
Query: 239 TSQAQDIYAKLCENGH 254
+ AQ +Y L +G
Sbjct: 294 LALAQQLYLSLKAHGE 309
>sp|F4I907|GLYR2_ARATH Glyoxylate/succinic semialdehyde reductase 2, chloroplastic
OS=Arabidopsis thaliana GN=GLYR2 PE=1 SV=1
Length = 358
Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 122/270 (45%), Gaps = 23/270 (8%)
Query: 5 MGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQ 64
+G K +P EV D+ ML +DV G NG + G +S + +D ST+D
Sbjct: 108 LGAKYKSSPEEVTATCDLTFAMLADPESAIDVACGKNGAIFGISSGKG--YVDVSTVD-- 163
Query: 65 TSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPL 124
V++ IL K+ + L+APVSG AE G L F+ G + Y+ A P
Sbjct: 164 --------VASSILISKQIKDTGALFLEAPVSGSKKPAEDGQLIFLTAGDKPLYEKAAPF 215
Query: 125 FLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSS 184
MGK+ Y G GNGAA K+ N+ M M +E + L Q +G+ + L ++++ +
Sbjct: 216 LDIMGKSKFYLGEVGNGAAMKLVVNMIMGSMMASFAEGILLSQKVGLDPNVLVEVVSQGA 275
Query: 185 --ARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQA 242
A +S P +++ V Y F K KD+ LAL A+ V P+ + A
Sbjct: 276 INAPMYSLKG----PSMIKSV-----YPTAFPLKHQQKDMRLALGLAESVSQSTPIAAAA 326
Query: 243 QDIYAKLCENGHDSKDFSCVFQHYYGGKDE 272
++Y G +DFS V + K
Sbjct: 327 NELYKVAKSYGLSDEDFSAVIEALKAAKSR 356
>sp|Q562D5|GLYR1_XENTR Putative oxidoreductase GLYR1 OS=Xenopus tropicalis GN=glyr1 PE=2
SV=1
Length = 534
Score = 102 bits (253), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 114/267 (42%), Gaps = 21/267 (7%)
Query: 1 MFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRP-QLLIDSS 59
+F G TP EV D+ + D+ GP+G+LQG +RP + +D S
Sbjct: 286 LFIQEGAHMGRTPAEVVSTCDITFACVADPKAAKDLVLGPSGVLQG---IRPGKCYVDMS 342
Query: 60 TIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQ 119
T+DP+T ++ + + L+APVSG + G L + G + Y+
Sbjct: 343 TVDPETVAELAQVIVS----------RGGRFLEAPVSGNQQLSNDGMLVILAAGDQGVYE 392
Query: 120 AAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKI 179
FL+MGK + + G GN A + N+ M ++E +TL Q G S TL I
Sbjct: 393 DCSSCFLAMGKTSFFLGEVGNAARMMLILNMVQGSFMATIAEGMTLAQVTGQSQQTLLDI 452
Query: 180 LNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLT 239
LN D +++G N+ F K + KDL LA+A V P+
Sbjct: 453 LNQGQLASIFLD--QKCQNILQG-----NFKPDFYLKYIQKDLRLAIALGDSVNHPTPMA 505
Query: 240 SQAQDIYAKLCENGHDSKDFSCVFQHY 266
+ A ++Y + D S V++ Y
Sbjct: 506 AAANEVYKRAKALDQSDNDMSAVYRAY 532
>sp|O33730|Y1503_SHEFN Uncharacterized oxidoreductase Sfri_1503 OS=Shewanella
frigidimarina (strain NCIMB 400) GN=Sfri_1503 PE=3 SV=2
Length = 291
Score = 97.1 bits (240), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 113/239 (47%), Gaps = 19/239 (7%)
Query: 11 ETPFEVAEASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNIS 70
+TP + A+ D+V T + + + V G +G++ G ++ +L+D +T +R I+
Sbjct: 50 DTPKDAAQGQDIVFTCVGNDDDLRQVVLGEHGIVHGMHA--GAILVDHTTASADVAREIA 107
Query: 71 AAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPLFLSMGK 130
A + N LDAPVSGG AE G LT M+GG + + KP+ + +
Sbjct: 108 AYIEPL----------NIAFLDAPVSGGQAGAENGALTVMMGGDQAHFDTVKPVISAYSR 157
Query: 131 NTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSS 190
G G G K+ N + +A + G++E L +S G+ + ++++ +A+ W
Sbjct: 158 CAELLGPVGAGQLTKMVNQICIAGVVQGLAEGLHFAKSAGLDGLKVIEVISKGAAQSWQM 217
Query: 191 DSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKL 249
+ N + +G Y GFA M KDL +AL A+ G P+ + Y+++
Sbjct: 218 E--NRYKTMWQG-----QYDFGFAIDWMRKDLGIALDEARRNGSHLPVAALVDQFYSEV 269
>sp|Q5RKH0|GLYR1_RAT Putative oxidoreductase GLYR1 OS=Rattus norvegicus GN=Glyr1 PE=2
SV=1
Length = 552
Score = 95.5 bits (236), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 110/267 (41%), Gaps = 21/267 (7%)
Query: 1 MFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRP-QLLIDSS 59
+F G TP EV D+ + D+ GP+G+LQG +RP + +D S
Sbjct: 304 LFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGVLQG---IRPGKCYVDMS 360
Query: 60 TIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQ 119
T+D T ++ + + L+APVSG + G L + G Y+
Sbjct: 361 TVDADTVTELAQVIVS----------RGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYE 410
Query: 120 AAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKI 179
F +MGK + + G GN A + N+ M ++E LTL Q G S TL I
Sbjct: 411 DCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDI 470
Query: 180 LNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLT 239
LN D +++G N+ F K + KDL LA+A V P+
Sbjct: 471 LNQGQLASIFLD--QKCQNILQG-----NFKPDFYLKYIQKDLRLAIALGDAVNHPTPMA 523
Query: 240 SQAQDIYAKLCENGHDSKDFSCVFQHY 266
+ A ++Y + D S V++ Y
Sbjct: 524 AAANEVYKRAKALDQSDNDMSAVYRAY 550
>sp|Q5ZLS7|GLYR1_CHICK Putative oxidoreductase GLYR1 OS=Gallus gallus GN=GLYR1 PE=2 SV=1
Length = 553
Score = 95.1 bits (235), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 110/267 (41%), Gaps = 21/267 (7%)
Query: 1 MFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRP-QLLIDSS 59
+F G TP EV D+ + D+ GP+G+LQG +RP + +D S
Sbjct: 305 LFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGVLQG---IRPGKCYVDMS 361
Query: 60 TIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQ 119
T+D T ++ + + L+APVSG + G L + G Y+
Sbjct: 362 TVDADTVTELAQVIVS----------RGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYE 411
Query: 120 AAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKI 179
F +MGK + + G GN A + N+ M ++E LTL Q G S TL I
Sbjct: 412 DCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDI 471
Query: 180 LNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLT 239
LN D +++G N+ F K + KDL LA+A V P+
Sbjct: 472 LNQGQLASIFLD--QKCQNILQG-----NFKPDFYLKYIQKDLRLAIALGDSVNHPTPMA 524
Query: 240 SQAQDIYAKLCENGHDSKDFSCVFQHY 266
+ A ++Y + D S V++ Y
Sbjct: 525 AAANEVYKRAKALDQSDNDMSAVYRAY 551
>sp|Q5R7T2|GLYR1_PONAB Putative oxidoreductase GLYR1 OS=Pongo abelii GN=GLYR1 PE=2 SV=2
Length = 553
Score = 95.1 bits (235), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 110/267 (41%), Gaps = 21/267 (7%)
Query: 1 MFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRPQ-LLIDSS 59
+F G TP EV D+ + D+ GP+G+LQG +RP+ +D S
Sbjct: 305 LFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGVLQG---IRPRKCYVDMS 361
Query: 60 TIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQ 119
T+D T ++ + + L+APVSG + G L + G Y+
Sbjct: 362 TVDADTVTELAQVIVS----------RGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYE 411
Query: 120 AAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKI 179
F +MGK + + G GN A + N+ M ++E LTL Q G S TL I
Sbjct: 412 DCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDI 471
Query: 180 LNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLT 239
LN D +++G N+ F K + KDL LA+A V P+
Sbjct: 472 LNQGQLASIFLD--QKCQNILQG-----NFKPDFYLKYIQKDLRLAIALGDAVNHPTPMA 524
Query: 240 SQAQDIYAKLCENGHDSKDFSCVFQHY 266
+ A ++Y + D S V++ Y
Sbjct: 525 AAANEVYKRAKALDQSDNDMSAVYRAY 551
>sp|A4FUF0|GLYR1_BOVIN Putative oxidoreductase GLYR1 OS=Bos taurus GN=GLYR1 PE=2 SV=1
Length = 553
Score = 95.1 bits (235), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 110/267 (41%), Gaps = 21/267 (7%)
Query: 1 MFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRP-QLLIDSS 59
+F G TP EV D+ + D+ GP+G+LQG +RP + +D S
Sbjct: 305 LFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGVLQG---IRPGKCYVDMS 361
Query: 60 TIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQ 119
T+D T ++ + + L+APVSG + G L + G Y+
Sbjct: 362 TVDADTVTELAQVIVS----------RGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYE 411
Query: 120 AAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKI 179
F +MGK + + G GN A + N+ M ++E LTL Q G S TL I
Sbjct: 412 DCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDI 471
Query: 180 LNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLT 239
LN D +++G N+ F K + KDL LA+A V P+
Sbjct: 472 LNQGQLASIFLD--QKCQNILQG-----NFKPDFYLKYIQKDLRLAIALGDAVNHPTPMA 524
Query: 240 SQAQDIYAKLCENGHDSKDFSCVFQHY 266
+ A ++Y + D S V++ Y
Sbjct: 525 AAANEVYKRAKALDQSDNDMSAVYRAY 551
>sp|Q29NG1|GLYR1_DROPS Putative oxidoreductase GLYR1 homolog OS=Drosophila pseudoobscura
pseudoobscura GN=GA18401 PE=3 SV=2
Length = 612
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 114/262 (43%), Gaps = 18/262 (6%)
Query: 2 FSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTI 61
F + G K+TP +V EA+D++ + D+ G G+LQ + +R + ++ ST+
Sbjct: 364 FVEAGAEVKDTPMDVVEAADIIFCCVSDPKGAKDLVFGNCGVLQLKD-LRNKAYVEMSTV 422
Query: 62 DPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAA 121
DP TS +I + C N L+A + G A G L + GG ++
Sbjct: 423 DPDTSLDIGEGIKQC----------NGRYLEAQIHGSRQEAADGMLIILAGGDRTVFEEC 472
Query: 122 KPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILN 181
F ++ KNT + G GN + AVS++G++EAL L IS + + I +
Sbjct: 473 HSCFKTIAKNTFFLGNVGNACKVNLILQTIQAVSLVGLAEALALADRFSISLNDIIDIFD 532
Query: 182 SSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQ 241
+S + +P+ A ++ M +DL L L A+ + P+TS
Sbjct: 533 LTSMK-------SPLLLAKGKEMAKGDFNPQQPLSHMQRDLRLVLNMAENLDQSMPVTSI 585
Query: 242 AQDIYAKLCENGHDSKDFSCVF 263
+++ G+ D S VF
Sbjct: 586 TNEVFKHTKRLGYSEHDSSAVF 607
>sp|Q922P9|GLYR1_MOUSE Putative oxidoreductase GLYR1 OS=Mus musculus GN=Glyr1 PE=2 SV=1
Length = 546
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 107/257 (41%), Gaps = 21/257 (8%)
Query: 11 ETPFEVAEASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRP-QLLIDSSTIDPQTSRNI 69
TP EV D+ + D+ GP+G+LQG +RP + +D ST+D T +
Sbjct: 308 RTPAEVVSTCDITFACVSDPKAAKDLVLGPSGVLQG---IRPGKCYVDMSTVDADTVTEL 364
Query: 70 SAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPLFLSMG 129
+ + + L+APVSG + G L + G Y+ F +MG
Sbjct: 365 AQVIVS----------RGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMG 414
Query: 130 KNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWS 189
K + + G GN A + N+ M ++E LTL Q G S TL ILN
Sbjct: 415 KTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDILNQGQLASIF 474
Query: 190 SDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKL 249
D +++G N+ F K + KDL LA+A V P+ + A ++Y +
Sbjct: 475 LD--QKCQNILQG-----NFKPDFYLKYIQKDLRLAIALGDAVNHPTPMAAAANEVYKRA 527
Query: 250 CENGHDSKDFSCVFQHY 266
D S V++ Y
Sbjct: 528 KALDQSDNDMSAVYRAY 544
>sp|Q49A26|GLYR1_HUMAN Putative oxidoreductase GLYR1 OS=Homo sapiens GN=GLYR1 PE=1 SV=3
Length = 553
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 109/267 (40%), Gaps = 21/267 (7%)
Query: 1 MFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRP-QLLIDSS 59
+F G TP EV D+ + D+ GP+G+LQG +RP + +D S
Sbjct: 305 LFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGVLQG---IRPGKCYVDMS 361
Query: 60 TIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQ 119
T+D T ++ + + L+APVSG + G L + G Y+
Sbjct: 362 TVDADTVTELAQVIVS----------RGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYE 411
Query: 120 AAKPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKI 179
F +MGK + + G GN A + N+ M ++E LTL G S TL I
Sbjct: 412 DCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAHVTGQSQQTLLDI 471
Query: 180 LNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLT 239
LN D +++G N+ F K + KDL LA+A V P+
Sbjct: 472 LNQGQLASIFLD--QKCQNILQG-----NFKPDFYLKYIQKDLRLAIALGDAVNHPTPMA 524
Query: 240 SQAQDIYAKLCENGHDSKDFSCVFQHY 266
+ A ++Y + D S V++ Y
Sbjct: 525 AAANEVYKRAKALDQSDNDMSAVYRAY 551
>sp|Q5RKN4|GLYR1_DANRE Putative oxidoreductase GLYR1 OS=Danio rerio GN=glyr1 PE=2 SV=1
Length = 462
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 116/268 (43%), Gaps = 22/268 (8%)
Query: 1 MFSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRP-QLLIDSS 59
+F G TP EV D+ + + D+ GP+G+LQG +RP + ++ S
Sbjct: 213 LFIQEGARLGRTPAEVVSMCDITFSCVSDPKAARDLVLGPSGVLQG---IRPGKCYVEMS 269
Query: 60 TIDPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQ 119
T+DP+T +S +++ L+APVSG + G L + G Y+
Sbjct: 270 TVDPETITELSQVITS----------RGGRFLEAPVSGSQQLSNDGMLVIVAAGDRSVYE 319
Query: 120 AAKPLFLSMGKNTIYCGG-AGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTK 178
F +MGK + + G AGN A + N+ M ++E LTL Q+ G S T
Sbjct: 320 DCSSCFQAMGKTSFFIAGEAGNAARMMLILNMVQGSFMATIAEGLTLAQATGQSQQTFLD 379
Query: 179 ILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPL 238
IL + S+ +++G N+ + K + KDL LA++ V P+
Sbjct: 380 IL--CQGQMASTFVDQKCQNILQG-----NFKPDYYLKHIQKDLRLAISMGDSVNHPTPM 432
Query: 239 TSQAQDIYAKLCENGHDSKDFSCVFQHY 266
+ A ++Y + D S V++ Y
Sbjct: 433 AAAANEVYKRAKALDQSDNDMSAVYRAY 460
>sp|Q8T079|GLYR1_DROME Putative oxidoreductase GLYR1 homolog OS=Drosophila melanogaster
GN=CG4747 PE=1 SV=1
Length = 602
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 114/262 (43%), Gaps = 18/262 (6%)
Query: 2 FSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTI 61
F++ G K+TP +V EA+DV+ + D+ G G+LQ + + + ++ STI
Sbjct: 354 FAEAGAEVKDTPMDVVEAADVIFCCVSDPKGAKDLVFGNCGVLQLKD-LNNKAYVEMSTI 412
Query: 62 DPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAA 121
DP TS +I + C N L+A + G A G L + GG ++
Sbjct: 413 DPDTSLDIGEGIKQC----------NGRYLEAQIHGSRQEAAEGMLIILAGGDRSVFEEC 462
Query: 122 KPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILN 181
F ++ KNT + G GN + + VS++G++EAL L IS + + I +
Sbjct: 463 HSCFKTIAKNTFFLGNIGNACKVNLILQTILGVSLVGLAEALALADRFSISLNDIIDIFD 522
Query: 182 SSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQ 241
+S + +P+ A ++ M +DL L L A+ + P+TS
Sbjct: 523 LTSMK-------SPMLLAKGKEMAKGDFNPQQPLSHMQRDLRLVLNMAENLDQSMPVTSI 575
Query: 242 AQDIYAKLCENGHDSKDFSCVF 263
+++ G+ D S VF
Sbjct: 576 TNEVFKHTKRLGYSEHDSSAVF 597
>sp|Q9LSV0|GLYR1_ARATH Glyoxylate/succinic semialdehyde reductase 1 OS=Arabidopsis
thaliana GN=GLYR1 PE=1 SV=1
Length = 289
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 111/257 (43%), Gaps = 25/257 (9%)
Query: 11 ETPFEVAEASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNIS 70
E+P EV + I ML L V G+L+ + ID ST+D +TS I+
Sbjct: 48 ESPAEVIKKCKYTIAMLSDPCAALSVVFDKGGVLE--QICEGKGYIDMSTVDAETSLKIN 105
Query: 71 AAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPLFLSMGK 130
A++ + ++ PVSG AE G L + G + ++ + P F +GK
Sbjct: 106 EAITG----------KGGRFVEGPVSGSKKPAEDGQLIILAAGDKALFEESIPAFDVLGK 155
Query: 131 NTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSS 190
+ Y G GNGA K+ N+ M M SE L L G+S+ TL IL+ +
Sbjct: 156 RSFYLGQVGNGAKMKLIVNMIMGSMMNAFSEGLVLADKSGLSSDTLLDILDLGAMT---- 211
Query: 191 DSYNPVPGVMEGVPASRN---YGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYA 247
NP + +G S N Y F K KD+ LALA E V P+ + A + +
Sbjct: 212 ---NP---MFKGKGPSMNKSSYPPAFPLKHQQKDMRLALALGDENAVSMPVAAAANEAFK 265
Query: 248 KLCENGHDSKDFSCVFQ 264
K G DFS V +
Sbjct: 266 KARSLGLGDLDFSAVIE 282
>sp|P0A9V9|YIHU_SHIFL Uncharacterized oxidoreductase YihU OS=Shigella flexneri GN=yihU
PE=3 SV=1
Length = 298
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 131/264 (49%), Gaps = 22/264 (8%)
Query: 4 DMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDP 63
D G P + A+ ++ +ITMLP+ V +V G NG+ +G ++ L+ID STI P
Sbjct: 42 DKGATPAANPAQAAKDAEFIITMLPNGDLVRNVLFGENGVCEGLST--DALVIDMSTIHP 99
Query: 64 -QTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAK 122
QT + I+ ++ K S M+D PV A GTL + GG+ + + A
Sbjct: 100 LQTDKLIAD------MQAKGFS-----MMDVPVGRTSANAITGTLLLLAGGTAEQVERAT 148
Query: 123 PLFLSMGKNTIYCGGAGNGAAAKICNN-LTMAVSMLGVSEALTLGQSLGISASTLTKILN 181
P+ ++MG I GG G G K+ NN +++A++ L +EA L ++L + K+++
Sbjct: 149 PILMAMGSELINAGGPGMGIRVKLINNYMSIALNALS-AEAAVLCEALNLPFDVAVKVMS 207
Query: 182 SSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQ 241
++A + P V+ G + F L KDL +AL A ++ V PL +
Sbjct: 208 GTAAGKGHFTTSWP-NKVLSG-----DLSPAFMIDLAHKDLGIALDVANQLHVPMPLGAA 261
Query: 242 AQDIYAKLCENGHDSKDFSCVFQH 265
++++Y++ G +D+S + +
Sbjct: 262 SREVYSQARAAGRGRQDWSAILEQ 285
>sp|P0A9V8|YIHU_ECOLI Uncharacterized oxidoreductase YihU OS=Escherichia coli (strain
K12) GN=yihU PE=3 SV=1
Length = 298
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 131/264 (49%), Gaps = 22/264 (8%)
Query: 4 DMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDP 63
D G P + A+ ++ +ITMLP+ V +V G NG+ +G ++ L+ID STI P
Sbjct: 42 DKGATPAANPAQAAKDAEFIITMLPNGDLVRNVLFGENGVCEGLST--DALVIDMSTIHP 99
Query: 64 -QTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAK 122
QT + I+ ++ K S M+D PV A GTL + GG+ + + A
Sbjct: 100 LQTDKLIAD------MQAKGFS-----MMDVPVGRTSANAITGTLLLLAGGTAEQVERAT 148
Query: 123 PLFLSMGKNTIYCGGAGNGAAAKICNN-LTMAVSMLGVSEALTLGQSLGISASTLTKILN 181
P+ ++MG I GG G G K+ NN +++A++ L +EA L ++L + K+++
Sbjct: 149 PILMAMGSELINAGGPGMGIRVKLINNYMSIALNALS-AEAAVLCEALNLPFDVAVKVMS 207
Query: 182 SSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQ 241
++A + P V+ G + F L KDL +AL A ++ V PL +
Sbjct: 208 GTAAGKGHFTTSWP-NKVLSG-----DLSPAFMIDLAHKDLGIALDVANQLHVPMPLGAA 261
Query: 242 AQDIYAKLCENGHDSKDFSCVFQH 265
++++Y++ G +D+S + +
Sbjct: 262 SREVYSQARAAGRGRQDWSAILEQ 285
>sp|Q9L7S0|YIHU_SALTY Uncharacterized oxidoreductase YihU OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=yihU PE=3 SV=1
Length = 298
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 126/263 (47%), Gaps = 20/263 (7%)
Query: 4 DMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDP 63
D G +P + ++ VITMLP+ V V G G+ + R L+ID STI P
Sbjct: 42 DKGAQPASSPAQATIGAEFVITMLPNGDLVRSVLFGEQGVCE--TLSREALVIDMSTIHP 99
Query: 64 QTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKP 123
+ N+ A ++ K S M+D P+ A GTL + GG+ + + A P
Sbjct: 100 LQTDNLIAD-----MQSKGFS-----MMDVPIGRTSDNAITGTLLLLAGGTAEQVERATP 149
Query: 124 LFLSMGKNTIYCGGAGNGAAAKICNN-LTMAVSMLGVSEALTLGQSLGISASTLTKILNS 182
+ ++MG + GG G G K+ NN +++A++ L +EA L ++LG+S K+++
Sbjct: 150 VLMAMGNELVNTGGPGMGIRVKLINNYMSIALNALS-AEAAVLCEALGLSFDVALKVMSG 208
Query: 183 SSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQA 242
++A + P VM+G + F L KDL +AL A ++ V PL + +
Sbjct: 209 TAAGKGHFTTTWP-NKVMKG-----DLSPAFMIDLAHKDLGIALDVANQLHVPMPLGAAS 262
Query: 243 QDIYAKLCENGHDSKDFSCVFQH 265
+++Y G +D+S + +
Sbjct: 263 REVYNLARAAGRGREDWSAILEQ 285
>sp|O34969|YFJR_BACSU Uncharacterized oxidoreductase YfjR OS=Bacillus subtilis (strain
168) GN=yfjR PE=3 SV=2
Length = 286
Score = 82.0 bits (201), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 117/273 (42%), Gaps = 46/273 (16%)
Query: 6 GVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPNGLLQG--GNSVRPQLLIDSSTIDP 63
G +TP A+++D+VITML V V G +GLL+G N + I STI
Sbjct: 43 GAQAADTPRLAAKSADIVITMLADDDSVSTVTFGEDGLLEGLAENGIH----ISMSTISV 98
Query: 64 QTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKP 123
+ S ++AA + + L APV G AA L + G +A QAAKP
Sbjct: 99 EFSEKLAAA----------HAEKGQFFLAAPVLGRPDAAAKAALRIITAGPAEAKQAAKP 148
Query: 124 LFLSMGKNTIYCGGAGNGA-AAKICNNLTMAVSML-GVSEALTLGQSLGISASTLTKILN 181
L S+ + G A AAKI N + VSML +SE+ + + G+ +I +
Sbjct: 149 LLDSLSQQIFDVGEESKTANAAKISINFLL-VSMLEALSESFLMMEKYGLEQKQFLEIAS 207
Query: 182 SSSARCWSSDSYNPVPGVMEGVPASRNYG----------GGFASKLMAKDLNLALASAKE 231
+ + G P +NYG GF L KD NLALA+AK
Sbjct: 208 A-----------------LFGSPVYQNYGTIMAEQKFEPAGFKMSLGLKDTNLALAAAKR 250
Query: 232 VGVDCPLTSQAQDIYAKLCENGHDSKDFSCVFQ 264
V + PL A+ + E G D++ + +
Sbjct: 251 VSANLPLAELAKSHFESGIEKGFGDLDWAALIK 283
>sp|Q55702|Y229_SYNY3 Uncharacterized oxidoreductase slr0229 OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=slr0229 PE=3 SV=1
Length = 290
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 111/221 (50%), Gaps = 22/221 (9%)
Query: 12 TPFEVAEA-SDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRPQ-LLIDSSTIDPQTSRNI 69
T VA A +D+++T + V + G G+ + +PQ L+ID STI + +
Sbjct: 53 TSIAVAAANADIILTCVGDEKDVQQLILGSGGIAE---YAKPQALIIDCSTIGKTAAYEL 109
Query: 70 SAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPLFLSMG 129
+ +N L+ + LDAPV+GG + A GTLT MVGG ++ A P+ S+G
Sbjct: 110 A---TNLKLQGLR-------FLDAPVTGGDVGAINGTLTIMVGGDISDFEEALPVLKSIG 159
Query: 130 KNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWS 189
+ ++CG +G+G A K+CN + + + +EA+ L + LGI+ + S +A W+
Sbjct: 160 EKIVHCGPSGSGQAVKLCNQVLCGIHAIAAAEAIQLSEQLGIAPELVIDTCGSGAAGSWA 219
Query: 190 SDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAK 230
N P + E ++ GF K + KDL L +A+
Sbjct: 220 LT--NLAPKMSEA-----DFAPGFMVKHLLKDLRLVREAAE 253
>sp|Q9C991|3HID2_ARATH Probable 3-hydroxyisobutyrate dehydrogenase-like 2, mitochondrial
OS=Arabidopsis thaliana GN=At1g71170 PE=2 SV=1
Length = 299
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 120/258 (46%), Gaps = 26/258 (10%)
Query: 6 GVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRPQ-LLIDSSTIDPQ 64
G T +P E+ E SDVV T++ +S+ V + G +G+L G ++P + +D ++ P
Sbjct: 56 GGRTANSPKELGEMSDVVFTIVGNSNDVRSLLLGDDGVLSG---LKPGGVTVDMTSSKPG 112
Query: 65 TSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPL 124
+R I A ++D W +DAPVSGG A G LT GG + + P+
Sbjct: 113 LAREIYAEA------RRRDCWA----VDAPVSGGDAGAREGKLTIFAGGDSEIVEWLAPV 162
Query: 125 FLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSS 184
+MG + GGAG+G + KI N + + +M+G++E + + G+ + + +
Sbjct: 163 MKTMGI-VRFMGGAGSGQSCKIGNQICVGSNMIGLAEGIVFAEKAGLDPVKWLEAVKDGA 221
Query: 185 ARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQD 244
A + V + + A R+Y ++ M KDL +A +A P T+ +
Sbjct: 222 AG-------SAVMRLFGEMMAVRDYKATGFAEYMVKDLGMAAEAAMA----MPGTALNKQ 270
Query: 245 IYAKLCENGHDSKDFSCV 262
++ + NG F V
Sbjct: 271 LFTVMVANGDGKLGFQGV 288
>sp|Q7Q161|GLYR1_ANOGA Putative oxidoreductase GLYR1 homolog OS=Anopheles gambiae
GN=AGAP009949 PE=3 SV=5
Length = 566
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 120/265 (45%), Gaps = 25/265 (9%)
Query: 2 FSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTI 61
F ++G +TP +V E +DV + + D+ G G++ ++ + ++ + +
Sbjct: 319 FQEVGAEVADTPSDVVEMTDVTYSCVSDPQVAKDMVFGNCGVMSA--NLAGKGYVEMTGV 376
Query: 62 DPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAA 121
DP+TS +I+ A+ I K + L+A + G AE GTL + G ++
Sbjct: 377 DPETSNDINEAI---ISKGGR-------YLEAQIQGSKNQAEEGTLIILASGDRLLFEEC 426
Query: 122 KPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKIL- 180
+ F ++ +N+ Y G GN + + +++ GV+EA+ L G+ + ++L
Sbjct: 427 QSCFEAISRNSFYLGDVGNATKMNLILQMISGITLAGVAEAMALADRAGLQQKDVLEVLE 486
Query: 181 --NSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPL 238
N SS + +++G + A K M KDL LAL+ A + P+
Sbjct: 487 LTNMSSEMMLQKGN-----AIIKG-----EFPTHHALKHMQKDLKLALSLADGLEQSLPI 536
Query: 239 TSQAQDIYAKLCENGHDSKDFSCVF 263
T+ + ++Y G+ S D S V+
Sbjct: 537 TAASNEVYKHAKRLGYGSHDASAVY 561
>sp|Q949M8|3HID3_ARATH Probable 3-hydroxyisobutyrate dehydrogenase-like 3, mitochondrial
OS=Arabidopsis thaliana GN=At1g71180 PE=2 SV=1
Length = 318
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 85/167 (50%), Gaps = 15/167 (8%)
Query: 6 GVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRPQ-LLIDSSTIDPQ 64
G +P E+AE SDVV T++ + + V + G +G+L G + P + +D ++ P
Sbjct: 77 GARIANSPKELAEMSDVVFTIVGNFNDVRSLLLGDDGVLSG---LTPGGVTVDMTSSKPG 133
Query: 65 TSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPL 124
+R I A +++ W +DAPVSGG A GTL GG + + P+
Sbjct: 134 LAREIHAEA------RRRNCWA----VDAPVSGGDAGAREGTLGIFAGGDSEIVEWLSPV 183
Query: 125 FLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGI 171
++G T Y G AG+G + KI N + A +++G++E + + G+
Sbjct: 184 MKNIGTVT-YMGEAGSGQSCKIGNQIAGASNLVGLAEGIVFAEKAGL 229
>sp|Q175F8|GLYR1_AEDAE Putative oxidoreductase GLYR1 homolog OS=Aedes aegypti
GN=AAEL006684 PE=3 SV=1
Length = 559
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 115/262 (43%), Gaps = 19/262 (7%)
Query: 2 FSDMGVPTKETPFEVAEASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTI 61
F + G +TP +V E +DV + + ++ G G++ ++ + ++ + +
Sbjct: 312 FQEAGAEVADTPSDVIEMTDVTFSCVADPQVAKELVFGNCGVMSA--NLVGKGYVEMTGV 369
Query: 62 DPQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAA 121
DP+TS +I+ + I K + L+A + G AE GTL + G ++
Sbjct: 370 DPETSHDIAEQI---IAKGGR-------YLEAQIQGSKNQAEEGTLIILAAGERLLFEEC 419
Query: 122 KPLFLSMGKNTIYCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILN 181
+ F ++ +N+ Y G GN + + V + G++E L L G+ + ++L
Sbjct: 420 QTCFEAISRNSFYMGDVGNATKMNLVLQMISGVMLAGIAEGLALADRAGLQQKDVLEVLE 479
Query: 182 SSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQ 241
+S S +++G + A K M KDL LAL A+ + P+T+
Sbjct: 480 LTSMS--SELVMQKGNAIIKG-----EFPPQQALKHMQKDLKLALNMAEGLEQPLPITAA 532
Query: 242 AQDIYAKLCENGHDSKDFSCVF 263
+ ++Y G+ S D S V+
Sbjct: 533 SNEVYKHAKRLGYGSHDSSAVY 554
>sp|Q46888|YGBJ_ECOLI Uncharacterized oxidoreductase YgbJ OS=Escherichia coli (strain
K12) GN=ygbJ PE=3 SV=1
Length = 302
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 118/254 (46%), Gaps = 22/254 (8%)
Query: 17 AEASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRP-QLLIDSSTIDPQTSRNISAAVSN 75
AE D ++ ++ +++ V V G G+ Q ++P ++ SSTI ++ I+ A++
Sbjct: 61 AEKLDALLVLVVNAAQVKQVLFGETGVAQ---HLKPGTAVMVSSTIASADAQEIATALAG 117
Query: 76 CILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPLFLSMGKNTIYC 135
L+ MLDAPVSGG + A G +T M GS+ A++ P+ ++
Sbjct: 118 FDLE----------MLDAPVSGGAVKAANGEMTVMASGSDIAFERLAPVLEAVAGKVYRI 167
Query: 136 GGA-GNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSSDSYN 194
G G G+ KI + L V + +EA+ L GI + ++ +++ W + N
Sbjct: 168 GAEPGLGSTVKIIHQLLAGVHIAAGAEAMALAARAGIPLDVMYDVVTNAAGNSWMFE--N 225
Query: 195 PVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGH 254
+ V++G +Y A + KDL L +AK + PL S A +++ G+
Sbjct: 226 RMRHVVDG-----DYTPHSAVDIFVKDLGLVADTAKALHFPLPLASTALNMFTSASNAGY 280
Query: 255 DSKDFSCVFQHYYG 268
+D S V + + G
Sbjct: 281 GKEDDSAVIKIFSG 294
>sp|P44979|Y1010_HAEIN Uncharacterized oxidoreductase HI_1010 OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_1010
PE=3 SV=1
Length = 301
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 26/259 (10%)
Query: 14 FEVAEASDVVITMLPSSSHVLDVYNGPNGL---LQGGNSVRPQLLIDSSTIDPQTSRNIS 70
++ A D V+ ++ +++ V G NG+ L+ G +V SST+ Q ++ IS
Sbjct: 57 YDFAHELDAVVILVVNAAQANAVLFGENGIAKKLKAGTAVMV-----SSTMAAQDAQIIS 111
Query: 71 AAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPLFLSMGK 130
++ L +MLDAPVSGG A G +T M GS+ A++ +P+ +
Sbjct: 112 QKLTELGL----------IMLDAPVSGGAAKALKGEMTVMASGSKQAFELLQPVLDATAA 161
Query: 131 NTIYCGGA-GNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWS 189
G G GA KI + L V + +EA+ L GI + ++ +++ W
Sbjct: 162 KVYNIGEEIGLGATVKIVHQLLAGVHIAAGAEAMALASKAGIPLDVMYDVVTNAAGNSWM 221
Query: 190 SDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKL 249
+ N + V+EG +Y + KDL L +AK + L S A ++ +
Sbjct: 222 FE--NRMKHVVEG-----DYTPLSMVDIFVKDLGLVNDTAKSLHFPLHLASTAYSMFTEA 274
Query: 250 CENGHDSKDFSCVFQHYYG 268
G+ +D S V + + G
Sbjct: 275 SNAGYGKEDDSAVIKIFSG 293
>sp|P86199|3HIDH_MESAU 3-hydroxyisobutyrate dehydrogenase, mitochondrial (Fragments)
OS=Mesocricetus auratus GN=HIBADH PE=1 SV=1
Length = 130
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 67/177 (37%), Gaps = 83/177 (46%)
Query: 20 SDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRPQLLIDSSTIDPQTSRNISAAVSNCILK 79
+D +ITMLPSS + ++VY+G NG+L
Sbjct: 18 ADRIITMLPSSMNSIEVYSGANGIL----------------------------------- 42
Query: 80 EKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPLFLSMGKNTIYCGGAG 139
K+ V +DAPVSGGV
Sbjct: 43 -KEVEKMGAVFMDAPVSGGV---------------------------------------- 61
Query: 140 NGAAAKICNNLTMAVSMLGVSEALTLG-QSLGI----SASTLTKILNSSSARCWSSD 191
AA+ICNN+ +A+SM+G +EA+ LG + LG+ + ST T IL S A D
Sbjct: 62 --GAARICNNMLLAISMIGTAEAMNLGIRDLGLAQDSATSTKTPILLGSVAHQIYRD 116
>sp|P71825|Y770_MYCTU Uncharacterized oxidoreductase Rv0770/MT0794 OS=Mycobacterium
tuberculosis GN=Rv0770 PE=3 SV=1
Length = 295
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 104/241 (43%), Gaps = 38/241 (15%)
Query: 15 EVAEASDVVITMLPSSSHVLDVYNGPNGLLQGGNSVRPQLLID-SSTIDPQTSRNISAAV 73
+VAEA + IT+ + V V NGL +P ++ STI T+ +++
Sbjct: 59 DVAEADIISITVF-DDAQVSSVITADNGL---ATHAKPGTIVAIHSTIADTTAVDLA--- 111
Query: 74 SNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPLFLSMGKNTI 133
+K + ++DAPVSGG AA G L MVG ++A+Q K F I
Sbjct: 112 -------EKLKPQGIHIVDAPVSGGAAAAAKGELAVMVGADDEAFQRIKEPFSRWASLLI 164
Query: 134 YCGGAGNGAAAKICNNLTMAVSMLGVSEALTLGQSLGISASTLTKILNSSSARCWSS--- 190
+ G G G K+ N+ VS +EA L ++ G+ L K++ S + +
Sbjct: 165 HAGEPGAGTRMKLARNMLTFVSYAAAAEAQRLAEACGLDLVALGKVVRHSDSFTGGAGAI 224
Query: 191 ---------DSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQ 241
+ +P+ ++E +R G KDL+LALA + V VD PL
Sbjct: 225 MFRNTTAPMEPADPLRPLLE---HTRGLG--------EKDLSLALALGEVVSVDLPLAQL 273
Query: 242 A 242
A
Sbjct: 274 A 274
>sp|P54448|YQEC_BACSU Putative 6-phosphogluconate dehydrogenase YqeC OS=Bacillus subtilis
(strain 168) GN=yqeC PE=3 SV=1
Length = 297
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
Query: 91 LDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAKPLF--LSMGKNTIYCGGAGNGAAAKICN 148
LDA SGG+ A G FMVGG +A++ +PLF ++ +Y G AG+G K+ +
Sbjct: 115 LDAGTSGGMEGARHGA-CFMVGGDHEAWEIVEPLFRDTAVENGYLYAGEAGSGHFLKMIH 173
Query: 149 NLTMAVSMLGVSEALTLGQS--LGISASTLTKILNSSSA-RCW 188
N M + E + ++ + ++ N S R W
Sbjct: 174 NGIEYGMMAAIGEGFEVLENSQFDFDYEKVARVWNHGSVIRSW 216
>sp|P21577|6PGD_SYNE7 6-phosphogluconate dehydrogenase, decarboxylating OS=Synechococcus
elongatus (strain PCC 7942) GN=gnd PE=1 SV=4
Length = 471
Score = 34.7 bits (78), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 10/93 (10%)
Query: 98 GVLAAEAGTL---TFMVGGSEDAYQAAKPLFLSM------GKNTIYCGGAGNGAAAKICN 148
GV E G L + M GG++ AY+A +P+ S+ G Y G G+G K+ +
Sbjct: 127 GVSGGEEGALNGPSLMPGGTQAAYEAVEPIVRSIAAQVDDGPCVTYIGPGGSGHYVKMVH 186
Query: 149 NLTMAVSMLGVSEALTLGQSL-GISASTLTKIL 180
N M ++EA L +S+ G++AS L +
Sbjct: 187 NGIEYGDMQLIAEAYDLLKSVAGLNASELHDVF 219
>sp|P70718|6PGD_AGGAC 6-phosphogluconate dehydrogenase, decarboxylating
OS=Aggregatibacter actinomycetemcomitans GN=gnd PE=3
SV=1
Length = 484
Score = 34.7 bits (78), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 90/225 (40%), Gaps = 34/225 (15%)
Query: 63 PQTSRNISAAVSNCILKEKKDSWENPVMLDAPVSGGVLAAEAGTLTFMVGGSEDAYQAAK 122
P T+R ++A L+EK + VSGG A G + M GG+E+A+Q K
Sbjct: 108 PDTNRRVAA------LREK-----GIRFIGTGVSGGEEGARHGP-SIMPGGNEEAWQFVK 155
Query: 123 PLFLSMGKNTI-------YCGGAGNGAAAKICNNLTMAVSMLGVSEALT-LGQSLGISAS 174
P+ ++ T + G G G K+ +N M + EA L + +G+S
Sbjct: 156 PVLQAISAKTEQGEPCCDWVGKDGAGHFVKMVHNGIEYGDMQLICEAYQFLKEGVGLSDD 215
Query: 175 TLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLA--LASAKEV 232
L N R DSY +++ Y S+L+ K L+ A + K
Sbjct: 216 ELQATFN--EWRNTELDSY-----LIDITADILGYKDADGSRLVDKVLDTAGQKGTGKWT 268
Query: 233 GVDC-----PLTSQAQDIYAKLCENGHDSKDFSCVFQHYYGGKDE 272
G++ PLT + ++A+ D + + H GK E
Sbjct: 269 GINALDFGIPLTLITESVFARCVSAFKDQRVAASKLFHKTIGKVE 313
>sp|P12013|6PGD_BACSU 6-phosphogluconate dehydrogenase, decarboxylating OS=Bacillus
subtilis (strain 168) GN=gntZ PE=3 SV=1
Length = 468
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 10/95 (10%)
Query: 98 GVLAAEAGTLT---FMVGGSEDAYQAAKPLFLSMGKNT------IYCGGAGNGAAAKICN 148
G+ E G LT M GG D Y+ A P+ + +Y G G G K+ +
Sbjct: 125 GISGGEVGALTGPSIMPGGDRDVYEKAAPILTKIAAQVGDDPCCVYIGPKGAGHFTKMVH 184
Query: 149 NLTMAVSMLGVSEALT-LGQSLGISASTLTKILNS 182
N M ++EA T L ++L + + I +
Sbjct: 185 NGIEYADMQLIAEAYTFLRETLRLPLDEIASIFET 219
>sp|P43774|6PGD_HAEIN 6-phosphogluconate dehydrogenase, decarboxylating OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=gnd PE=3 SV=1
Length = 484
Score = 33.1 bits (74), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Query: 108 TFMVGGSEDAYQAAKPLFLSMGKNTI-------YCGGAGNGAAAKICNNLTMAVSMLGVS 160
+ M GG+++A+Q KP+F ++ T + GG G G K+ +N M +
Sbjct: 141 SIMPGGNQEAWQYVKPIFQAISAKTEQGEPCCDWVGGEGAGHFVKMVHNGIEYGDMQLIC 200
Query: 161 EALT-LGQSLGISASTLTKIL 180
EA L + LG+S + I
Sbjct: 201 EAYQFLKEGLGLSYEEMQAIF 221
>sp|P52207|6PGD_BACLI 6-phosphogluconate dehydrogenase, decarboxylating OS=Bacillus
licheniformis GN=gntZ PE=3 SV=1
Length = 467
Score = 32.7 bits (73), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 95 VSGGVLAAEAGTLTFMVGGSEDAYQAAKPLFLSMGKNT------IYCGGAGNGAAAKICN 148
+SGG + A G + M GG D Y+ A P+ + +Y G G G K+ +
Sbjct: 126 ISGGEVGALKGP-SIMPGGDRDVYEKAAPILTKIAAQVEGDPCCVYIGPKGAGHFVKMVH 184
Query: 149 NLTMAVSMLGVSEALT-LGQSLGISASTLTKILNS 182
N M ++EA T L + L + + I ++
Sbjct: 185 NGIEYADMQLIAEAYTFLREKLLLPIDEIADIFDT 219
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.130 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,293,178
Number of Sequences: 539616
Number of extensions: 4171945
Number of successful extensions: 8646
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 8511
Number of HSP's gapped (non-prelim): 85
length of query: 273
length of database: 191,569,459
effective HSP length: 116
effective length of query: 157
effective length of database: 128,974,003
effective search space: 20248918471
effective search space used: 20248918471
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)