Query 024069
Match_columns 273
No_of_seqs 108 out of 1127
Neff 7.9
Searched_HMMs 13730
Date Mon Mar 25 17:41:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024069.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/024069hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2jfga1 c.5.1.1 (A:1-93) UDP-N 19.9 19 0.0014 23.3 1.4 13 6-18 1-13 (93)
2 d1pjqa1 c.2.1.11 (A:1-113) Sir 8.6 61 0.0044 21.3 1.4 13 6-18 8-20 (113)
3 d1ciya3 f.1.3.1 (A:33-255) del 8.3 1.3E+02 0.0095 22.6 3.5 27 181-207 6-32 (223)
4 d1cyda_ c.2.1.2 (A:) Carbonyl 7.8 69 0.005 24.3 1.5 12 7-18 2-13 (242)
5 d1zp6a1 c.37.1.25 (A:6-181) Hy 7.8 1.4E+02 0.0099 20.2 3.2 24 7-36 1-24 (176)
6 d1q7ba_ c.2.1.2 (A:) beta-keto 7.5 59 0.0043 24.7 0.9 12 7-18 1-12 (243)
7 d1yb1a_ c.2.1.2 (A:) 17-beta-h 7.3 72 0.0052 24.3 1.4 14 5-18 2-15 (244)
8 d1ulua_ c.2.1.2 (A:) Enoyl-ACP 7.0 79 0.0057 23.9 1.5 14 5-18 3-16 (256)
9 d1d7oa_ c.2.1.2 (A:) Enoyl-ACP 6.7 85 0.0062 24.0 1.6 14 5-18 3-16 (297)
10 d1pzma_ c.61.1.1 (A:) Hypoxant 6.4 1.3E+02 0.0097 21.6 2.5 21 4-24 93-113 (183)
No 1
>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}
Probab=19.95 E-value=19 Score=23.32 Aligned_cols=13 Identities=46% Similarity=0.800 Sum_probs=11.9
Q ss_pred ccCCCceEEEEee
Q 024069 6 ANLGGKKVIFCGL 18 (273)
Q Consensus 6 ~~~~~~~~~~~~~ 18 (273)
||+.||+|.+.|+
T Consensus 1 ~~~~~K~v~ViGl 13 (93)
T d2jfga1 1 ADYQGKNVVIIGL 13 (93)
T ss_dssp CCCTTCCEEEECC
T ss_pred CCcCCCEEEEEeE
Confidence 6899999999998
No 2
>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}
Probab=8.64 E-value=61 Score=21.32 Aligned_cols=13 Identities=15% Similarity=0.348 Sum_probs=11.2
Q ss_pred ccCCCceEEEEee
Q 024069 6 ANLGGKKVIFCGL 18 (273)
Q Consensus 6 ~~~~~~~~~~~~~ 18 (273)
-||.||+|++.|-
T Consensus 8 l~l~~k~vlVvG~ 20 (113)
T d1pjqa1 8 CQLRDRDCLIVGG 20 (113)
T ss_dssp ECCBTCEEEEECC
T ss_pred EEeCCCEEEEECC
Confidence 4889999999987
No 3
>d1ciya3 f.1.3.1 (A:33-255) delta-Endotoxin (insectocide), N-terminal domain {Bacillus thuringiensis, CRYIA (A) [TaxId: 1428]}
Probab=8.34 E-value=1.3e+02 Score=22.55 Aligned_cols=27 Identities=19% Similarity=0.268 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHhhccchHHHHHHhhhh
Q 024069 181 TLFVVLTTLISMLLPFFNDVVGILGAM 207 (273)
Q Consensus 181 ~~~v~~~~~iAi~iP~f~~ll~lvGa~ 207 (273)
+.+-+++++++.++|..+.++|+++-+
T Consensus 6 i~~~~~~~ll~~~iP~~g~~~~li~~l 32 (223)
T d1ciya3 6 ISLSLTQFLLSEFVPGAGFVLGLVDII 32 (223)
T ss_dssp HHHHHHHHHHHCCSSSHHHHHHHHHHT
T ss_pred hHHHHHHHHhhhcCCchHHHHHHHHHH
Confidence 455678888898999999998887655
No 4
>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=7.79 E-value=69 Score=24.30 Aligned_cols=12 Identities=25% Similarity=0.592 Sum_probs=10.6
Q ss_pred cCCCceEEEEee
Q 024069 7 NLGGKKVIFCGL 18 (273)
Q Consensus 7 ~~~~~~~~~~~~ 18 (273)
||+||++++-|-
T Consensus 2 dl~GK~alITGa 13 (242)
T d1cyda_ 2 NFSGLRALVTGA 13 (242)
T ss_dssp CCTTCEEEEEST
T ss_pred CCCCCEEEEeCC
Confidence 699999999885
No 5
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=7.78 E-value=1.4e+02 Score=20.20 Aligned_cols=24 Identities=25% Similarity=0.495 Sum_probs=17.0
Q ss_pred cCCCceEEEEeeeeecccccCchhHHHHHH
Q 024069 7 NLGGKKVIFCGLIQYLNLFVTGTQKLWRSL 36 (273)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 36 (273)
|++||.+++.|. +.++++++-..+
T Consensus 1 ~~~g~iI~l~G~------~GsGKSTia~~L 24 (176)
T d1zp6a1 1 DLGGNILLLSGH------PGSGKSTIAEAL 24 (176)
T ss_dssp CCTTEEEEEEEC------TTSCHHHHHHHH
T ss_pred CCCCeEEEEECC------CCCCHHHHHHHH
Confidence 689999999988 444556655444
No 6
>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}
Probab=7.49 E-value=59 Score=24.75 Aligned_cols=12 Identities=33% Similarity=0.573 Sum_probs=10.7
Q ss_pred cCCCceEEEEee
Q 024069 7 NLGGKKVIFCGL 18 (273)
Q Consensus 7 ~~~~~~~~~~~~ 18 (273)
||+||.+++-|-
T Consensus 1 dl~gK~alITGa 12 (243)
T d1q7ba_ 1 NFEGKIALVTGA 12 (243)
T ss_dssp CCTTCEEEESSC
T ss_pred CCCCCEEEEeCC
Confidence 899999999885
No 7
>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.34 E-value=72 Score=24.32 Aligned_cols=14 Identities=21% Similarity=0.517 Sum_probs=12.2
Q ss_pred hccCCCceEEEEee
Q 024069 5 KANLGGKKVIFCGL 18 (273)
Q Consensus 5 ~~~~~~~~~~~~~~ 18 (273)
+.||+||.+++-|-
T Consensus 2 ~~~l~Gkv~lITGa 15 (244)
T d1yb1a_ 2 RKSVTGEIVLITGA 15 (244)
T ss_dssp CCCCTTCEEEEETT
T ss_pred CCCCCCCEEEEeCC
Confidence 56899999999886
No 8
>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}
Probab=7.03 E-value=79 Score=23.89 Aligned_cols=14 Identities=36% Similarity=0.721 Sum_probs=12.1
Q ss_pred hccCCCceEEEEee
Q 024069 5 KANLGGKKVIFCGL 18 (273)
Q Consensus 5 ~~~~~~~~~~~~~~ 18 (273)
+-||+||.+++-|-
T Consensus 3 ~~~L~gK~alITGa 16 (256)
T d1ulua_ 3 TVDLSGKKALVMGV 16 (256)
T ss_dssp EECCTTCEEEEESC
T ss_pred CcCCCCCEEEEECC
Confidence 45899999999886
No 9
>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}
Probab=6.73 E-value=85 Score=24.03 Aligned_cols=14 Identities=29% Similarity=0.674 Sum_probs=12.1
Q ss_pred hccCCCceEEEEee
Q 024069 5 KANLGGKKVIFCGL 18 (273)
Q Consensus 5 ~~~~~~~~~~~~~~ 18 (273)
.-||+||++++-|-
T Consensus 3 ~~~L~gK~alVTGa 16 (297)
T d1d7oa_ 3 PIDLRGKRAFIAGI 16 (297)
T ss_dssp CCCCTTCEEEEECC
T ss_pred CcCCCCCEEEEECC
Confidence 45899999999985
No 10
>d1pzma_ c.61.1.1 (A:) Hypoxanthine-guanine-xanthine PRTase {Leishmania tarentolae [TaxId: 5689]}
Probab=6.43 E-value=1.3e+02 Score=21.63 Aligned_cols=21 Identities=10% Similarity=0.229 Sum_probs=17.5
Q ss_pred hhccCCCceEEEEeeeeeccc
Q 024069 4 VKANLGGKKVIFCGLIQYLNL 24 (273)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~ 24 (273)
.+.|+.||.|+++.++-+.+.
T Consensus 93 ~~~~~~gk~VLlVDDI~DTG~ 113 (183)
T d1pzma_ 93 VRDSVENRHIMLVEDIVDSAI 113 (183)
T ss_dssp CSSCCTTCEEEEEEEEESSCH
T ss_pred CcchhccccEEEEeeeecccH
Confidence 456899999999999877765
Done!