Query 024071
Match_columns 273
No_of_seqs 187 out of 1173
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 08:44:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024071.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024071hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03156 GDSL esterase/lipase; 100.0 5.1E-61 1.1E-65 439.5 25.7 242 32-273 24-265 (351)
2 cd01837 SGNH_plant_lipase_like 100.0 1.4E-55 3E-60 399.4 23.1 234 36-273 1-234 (315)
3 PRK15381 pathogenicity island 100.0 2E-43 4.3E-48 326.1 19.5 185 31-273 138-325 (408)
4 cd01847 Triacylglycerol_lipase 100.0 9E-43 2E-47 310.8 17.6 200 35-270 1-204 (281)
5 cd01846 fatty_acyltransferase_ 100.0 2.2E-37 4.8E-42 274.0 18.3 195 37-273 1-197 (270)
6 COG3240 Phospholipase/lecithin 99.8 3.5E-20 7.7E-25 166.2 11.6 220 30-268 24-254 (370)
7 PF00657 Lipase_GDSL: GDSL-lik 99.8 5.9E-18 1.3E-22 144.8 12.8 179 38-271 1-185 (234)
8 cd01839 SGNH_arylesterase_like 98.4 9.7E-06 2.1E-10 68.7 12.9 143 77-267 20-168 (208)
9 cd01832 SGNH_hydrolase_like_1 98.3 1.1E-05 2.4E-10 66.8 11.8 143 37-267 1-144 (185)
10 cd01836 FeeA_FeeB_like SGNH_hy 98.1 4.9E-05 1.1E-09 63.3 12.1 82 165-267 67-149 (191)
11 cd01823 SEST_like SEST_like. A 97.9 0.00027 5.9E-09 61.8 13.3 153 81-268 31-202 (259)
12 cd04501 SGNH_hydrolase_like_4 97.9 0.00049 1.1E-08 56.8 13.6 78 165-266 59-136 (183)
13 PF13472 Lipase_GDSL_2: GDSL-l 97.8 0.00058 1.3E-08 55.0 12.8 81 165-266 61-141 (179)
14 cd01827 sialate_O-acetylestera 97.7 0.0012 2.6E-08 54.6 12.9 53 165-229 67-120 (188)
15 cd01830 XynE_like SGNH_hydrola 97.6 0.0015 3.2E-08 55.2 13.2 56 167-229 76-131 (204)
16 cd01844 SGNH_hydrolase_like_6 97.6 0.0012 2.5E-08 54.5 12.2 84 82-228 20-104 (177)
17 PRK10528 multifunctional acyl- 97.6 0.0017 3.7E-08 54.5 13.1 45 165-223 71-115 (191)
18 cd01824 Phospholipase_B_like P 97.6 0.0047 1E-07 55.4 16.6 205 31-266 6-227 (288)
19 cd01838 Isoamyl_acetate_hydrol 97.6 0.0016 3.5E-08 54.0 12.2 91 165-267 63-155 (199)
20 cd01822 Lysophospholipase_L1_l 97.5 0.0038 8.1E-08 51.0 13.3 46 165-225 64-109 (177)
21 cd01821 Rhamnogalacturan_acety 97.4 0.0031 6.7E-08 52.8 11.9 53 165-227 65-117 (198)
22 cd01825 SGNH_hydrolase_peri1 S 97.4 0.00083 1.8E-08 55.5 8.0 51 166-229 57-108 (189)
23 cd01835 SGNH_hydrolase_like_3 97.2 0.018 3.9E-07 47.8 14.2 80 165-267 69-148 (193)
24 cd01831 Endoglucanase_E_like E 96.3 0.054 1.2E-06 44.1 10.6 46 167-224 57-103 (169)
25 cd01841 NnaC_like NnaC (CMP-Ne 96.0 0.098 2.1E-06 42.6 10.3 77 165-266 51-128 (174)
26 KOG3670 Phospholipase [Lipid t 95.8 0.15 3.3E-06 47.1 11.7 74 136-223 161-236 (397)
27 cd04506 SGNH_hydrolase_YpmR_li 95.3 0.14 3.1E-06 42.7 9.1 92 165-267 68-161 (204)
28 COG2755 TesA Lysophospholipase 95.0 0.27 5.9E-06 41.4 10.2 14 166-179 78-91 (216)
29 cd01834 SGNH_hydrolase_like_2 94.9 0.22 4.9E-06 40.7 9.0 83 166-266 62-145 (191)
30 cd00229 SGNH_hydrolase SGNH_hy 94.8 0.19 4.1E-06 39.7 8.1 78 164-267 64-142 (187)
31 cd01829 SGNH_hydrolase_peri2 S 94.6 0.29 6.3E-06 40.6 9.2 82 166-266 60-141 (200)
32 PF14606 Lipase_GDSL_3: GDSL-l 94.6 0.86 1.9E-05 37.9 11.5 113 81-270 21-134 (178)
33 cd01828 sialate_O-acetylestera 94.1 0.24 5.1E-06 40.1 7.3 73 165-266 48-122 (169)
34 cd01833 XynB_like SGNH_hydrola 93.6 0.58 1.3E-05 37.2 8.8 74 165-268 40-114 (157)
35 cd04502 SGNH_hydrolase_like_7 92.3 1.8 3.9E-05 35.0 10.0 49 165-227 50-99 (171)
36 cd01820 PAF_acetylesterase_lik 91.9 0.81 1.8E-05 38.7 7.7 72 165-264 89-161 (214)
37 cd01826 acyloxyacyl_hydrolase_ 87.7 3.5 7.6E-05 37.2 8.4 55 167-228 124-180 (305)
38 KOG3035 Isoamyl acetate-hydrol 73.7 23 0.0005 30.5 7.9 93 165-268 68-165 (245)
39 COG2845 Uncharacterized protei 66.6 44 0.00095 30.5 8.6 84 165-270 177-263 (354)
40 PLN02757 sirohydrochlorine fer 65.0 15 0.00032 29.7 5.0 18 205-222 60-77 (154)
41 cd01840 SGNH_hydrolase_yrhL_li 61.2 36 0.00078 26.8 6.6 14 165-178 50-63 (150)
42 COG3240 Phospholipase/lecithin 57.6 4.7 0.0001 37.2 0.9 70 164-237 97-166 (370)
43 PRK13384 delta-aminolevulinic 54.1 26 0.00057 31.8 5.0 56 201-273 59-114 (322)
44 PRK09283 delta-aminolevulinic 53.7 22 0.00047 32.3 4.4 56 201-273 57-112 (323)
45 PF07172 GRP: Glycine rich pro 53.2 12 0.00027 27.7 2.4 10 5-15 1-10 (95)
46 cd00384 ALAD_PBGS Porphobilino 50.4 60 0.0013 29.5 6.6 56 201-273 49-104 (314)
47 PRK06520 5-methyltetrahydropte 47.4 63 0.0014 30.0 6.7 31 193-223 160-190 (368)
48 cd04823 ALAD_PBGS_aspartate_ri 46.2 39 0.00085 30.7 4.8 26 201-226 52-77 (320)
49 PF08029 HisG_C: HisG, C-termi 45.0 21 0.00046 25.2 2.4 21 205-225 52-72 (75)
50 COG0113 HemB Delta-aminolevuli 44.7 36 0.00078 30.8 4.3 27 201-227 59-85 (330)
51 cd03416 CbiX_SirB_N Sirohydroc 43.9 41 0.00089 24.5 4.0 25 205-237 46-70 (101)
52 PF00490 ALAD: Delta-aminolevu 41.1 74 0.0016 29.0 5.8 24 202-225 56-79 (324)
53 PRK13717 conjugal transfer pro 40.2 49 0.0011 25.9 3.9 26 246-271 70-95 (128)
54 PRK09121 5-methyltetrahydropte 39.9 1E+02 0.0023 28.2 6.8 30 193-222 146-175 (339)
55 PF01903 CbiX: CbiX; InterPro 39.9 17 0.00036 26.8 1.3 23 206-236 40-62 (105)
56 TIGR03455 HisG_C-term ATP phos 39.1 37 0.00081 25.3 3.1 23 203-225 74-96 (100)
57 KOG4079 Putative mitochondrial 35.6 18 0.00039 28.7 0.9 16 214-229 42-57 (169)
58 cd03414 CbiX_SirB_C Sirohydroc 34.3 86 0.0019 23.4 4.6 18 205-222 47-64 (117)
59 cd04236 AAK_NAGS-Urea AAK_NAGS 33.7 1.3E+02 0.0028 26.8 6.2 45 165-227 34-78 (271)
60 TIGR02744 TrbI_Ftype type-F co 33.5 73 0.0016 24.4 3.9 27 245-271 56-82 (112)
61 cd00419 Ferrochelatase_C Ferro 33.5 1.2E+02 0.0027 23.7 5.4 40 205-258 79-118 (135)
62 cd03411 Ferrochelatase_N Ferro 32.9 48 0.001 26.7 3.1 24 205-228 101-124 (159)
63 cd03412 CbiK_N Anaerobic cobal 28.7 51 0.0011 25.5 2.5 22 203-224 56-77 (127)
64 cd03311 CIMS_C_terminal_like C 28.4 2.2E+02 0.0047 25.7 6.9 38 193-231 145-182 (332)
65 PRK06233 hypothetical protein; 28.2 95 0.0021 28.9 4.6 32 193-224 161-192 (372)
66 smart00340 HALZ homeobox assoc 27.2 63 0.0014 20.2 2.1 16 255-270 19-34 (44)
67 KOG2794 Delta-aminolevulinic a 26.6 77 0.0017 28.3 3.4 55 165-227 39-93 (340)
68 cd04824 eu_ALAD_PBGS_cysteine_ 26.0 90 0.002 28.4 3.8 27 201-227 49-75 (320)
69 PF08331 DUF1730: Domain of un 26.0 1.2E+02 0.0026 21.2 3.8 16 214-229 8-23 (78)
70 cd03413 CbiK_C Anaerobic cobal 25.8 64 0.0014 24.1 2.5 17 206-222 45-61 (103)
71 cd03415 CbiX_CbiC Archaeal sir 25.7 62 0.0013 25.1 2.5 19 205-223 46-64 (125)
72 cd03409 Chelatase_Class_II Cla 24.5 1E+02 0.0022 22.1 3.3 23 205-227 47-69 (101)
73 CHL00202 argB acetylglutamate 24.4 2.9E+02 0.0064 24.5 6.9 63 139-229 6-68 (284)
74 PF08282 Hydrolase_3: haloacid 23.9 32 0.0007 28.7 0.6 15 35-49 202-216 (254)
75 PF02633 Creatininase: Creatin 23.2 95 0.0021 26.7 3.4 47 170-224 61-107 (237)
76 PRK03669 mannosyl-3-phosphogly 23.1 43 0.00092 29.3 1.2 16 34-49 205-220 (271)
77 PF09677 TrbI_Ftype: Type-F co 21.7 1.5E+02 0.0032 22.6 3.8 26 246-271 56-81 (111)
78 TIGR01486 HAD-SF-IIB-MPGP mann 21.5 51 0.0011 28.5 1.4 17 35-51 194-210 (256)
79 PRK00035 hemH ferrochelatase; 20.3 1.8E+02 0.0039 26.3 4.8 45 204-262 249-293 (333)
80 TIGR02463 MPGP_rel mannosyl-3- 20.1 48 0.001 27.8 0.9 16 34-49 194-209 (221)
No 1
>PLN03156 GDSL esterase/lipase; Provisional
Probab=100.00 E-value=5.1e-61 Score=439.53 Aligned_cols=242 Identities=45% Similarity=0.772 Sum_probs=206.2
Q ss_pred CCCCCEEEEeCCccccCCCCCCccccccCCCCCCccCCCCCCCccccCCCccHHHHHHHhcCCCCCCCCCCCCCcCCCCC
Q 024071 32 APLVPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNL 111 (273)
Q Consensus 32 ~~~~~~l~vFGDSlsD~Gn~~~~~~~~~~~~~PyG~~~~~~~~tGRfSnG~~~~d~la~~lgl~~~~ppyl~~~~~~~~~ 111 (273)
.+.+++|||||||++|+||++++.+..++++||||++||+++|+||||||++|+||||+.||+++++|||+++..++.++
T Consensus 24 ~~~~~aifvFGDSl~D~GN~~~l~~~~~~~~~pyG~~f~~~~ptGRfSnGr~~~D~iA~~lGl~p~~ppyl~~~~~~~~~ 103 (351)
T PLN03156 24 CAKVPAIIVFGDSSVDAGNNNQISTVAKSNFEPYGRDFPGGRPTGRFCNGRIAPDFISEAFGLKPAIPAYLDPSYNISDF 103 (351)
T ss_pred cCCCCEEEEecCcCccCCCccccccccccCCCCCCCCCCCCCCCccccCCChhhhhHHHHhCCCCCCCCCcCcccCchhh
Confidence 45699999999999999999877665678899999999987799999999999999999999944899999876556789
Q ss_pred cCCcceeccCccccCCCCCcccccChHHHHHHHHHHHHHHHHHhCchhhhhhhcCcEEEEEeCcchhhhhhhcCCccCCC
Q 024071 112 LIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKV 191 (273)
Q Consensus 112 ~~G~NfA~gGA~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~G~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~ 191 (273)
.+|+|||+||+++++.++.....++|.+||++|++++++++...|...+++.++++||+||||+|||+.+|+..+.....
T Consensus 104 ~~GvNFA~agag~~~~~~~~~~~~~l~~Qv~~F~~~~~~l~~~~g~~~~~~~~~~sL~~i~iG~NDy~~~~~~~~~~~~~ 183 (351)
T PLN03156 104 ATGVCFASAGTGYDNATSDVLSVIPLWKELEYYKEYQTKLRAYLGEEKANEIISEALYLISIGTNDFLENYYTFPGRRSQ 183 (351)
T ss_pred cccceeecCCccccCCCccccCccCHHHHHHHHHHHHHHHHHhhChHHHHHHHhcCeEEEEecchhHHHHhhcccccccc
Confidence 99999999999998765432245789999999999998888777765666778999999999999998655432211223
Q ss_pred CChHHHHHHHHHHHHHHHHHHhhcCccEEEEeCCCCCCCCCchhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhC
Q 024071 192 YTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKASWRQQEVAVEQ 271 (273)
Q Consensus 192 ~~~~~~v~~vv~~i~~~i~~L~~~GAR~~vV~~lpplGc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~L~~~~ 271 (273)
.+++++++.+++.+.+.|++||++|||||+|+|+||+||+|..+.....+..+|.+.+|++++.||++|+++|++|++++
T Consensus 184 ~~~~~~~~~lv~~~~~~i~~Ly~~GAR~~~V~~lpplGc~P~~~~~~~~~~~~C~~~~n~~~~~~N~~L~~~l~~L~~~~ 263 (351)
T PLN03156 184 YTVSQYQDFLIGIAENFVKKLYRLGARKISLGGLPPMGCLPLERTTNLMGGSECVEEYNDVALEFNGKLEKLVTKLNKEL 263 (351)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 45788999999999999999999999999999999999999976543223468999999999999999999999999999
Q ss_pred CC
Q 024071 272 EL 273 (273)
Q Consensus 272 p~ 273 (273)
||
T Consensus 264 pg 265 (351)
T PLN03156 264 PG 265 (351)
T ss_pred CC
Confidence 86
No 2
>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=100.00 E-value=1.4e-55 Score=399.36 Aligned_cols=234 Identities=48% Similarity=0.841 Sum_probs=198.7
Q ss_pred CEEEEeCCccccCCCCCCccccccCCCCCCccCCCCCCCccccCCCccHHHHHHHhcCCCCCCCCCCCCCcCCCCCcCCc
Q 024071 36 PAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGA 115 (273)
Q Consensus 36 ~~l~vFGDSlsD~Gn~~~~~~~~~~~~~PyG~~~~~~~~tGRfSnG~~~~d~la~~lgl~~~~ppyl~~~~~~~~~~~G~ 115 (273)
++||+||||++|+||+.++.+..+++.||||++||++ |+||||||++|+||||+.+|++..+|||+.+.. +.++.+|+
T Consensus 1 ~al~vFGDS~sD~Gn~~~~~~~~~~~~~PyG~~~~~~-p~GRfSnG~~~~d~la~~lgl~~~~p~~~~~~~-~~~~~~G~ 78 (315)
T cd01837 1 PALFVFGDSLVDTGNNNYLPTLAKANFPPYGIDFPGR-PTGRFSNGRLIIDFIAEALGLPLLPPPYLSPNG-SSDFLTGV 78 (315)
T ss_pred CcEEEecCccccCCCccccccccccCCCCCcCcCCCC-CCccccCCchhhhhhhhhccCCCCCCCccCccc-cchhhccc
Confidence 4799999999999998776544457899999999985 999999999999999999999944677876532 25688999
Q ss_pred ceeccCccccCCCCCcccccChHHHHHHHHHHHHHHHHHhCchhhhhhhcCcEEEEEeCcchhhhhhhcCCccCCCCChH
Q 024071 116 NFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPE 195 (273)
Q Consensus 116 NfA~gGA~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~G~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~ 195 (273)
|||+|||++.+.+.....+++|.+||++|++++++++...|+..+.+..+++||+||||+|||+..+...... ..+..
T Consensus 79 NfA~gGA~~~~~~~~~~~~~~l~~Qv~~F~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~--~~~~~ 156 (315)
T cd01837 79 NFASGGAGILDSTGFLGSVISLSVQLEYFKEYKERLRALVGEEAAADILSKSLFLISIGSNDYLNNYFANPTR--QYEVE 156 (315)
T ss_pred eecccCCccccCCcceeeeecHHHHHHHHHHHHHHHHHhhCHHHHHHHHhCCEEEEEecccccHHHHhcCccc--cCCHH
Confidence 9999999998765422346899999999999998887777776677888999999999999998765432210 23567
Q ss_pred HHHHHHHHHHHHHHHHHhhcCccEEEEeCCCCCCCCCchhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 024071 196 QYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKASWRQQEVAVEQEL 273 (273)
Q Consensus 196 ~~v~~vv~~i~~~i~~L~~~GAR~~vV~~lpplGc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~L~~~~p~ 273 (273)
++++.++++|.++|++||++|||||+|+|+||+||+|.++.....+..+|.+.+|++++.||++|+++|++|++++|+
T Consensus 157 ~~~~~~v~~i~~~v~~L~~~GAr~~~v~~lpplgc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~ 234 (315)
T cd01837 157 AYVPFLVSNISSAIKRLYDLGARKFVVPGLGPLGCLPSQRTLFGGDGGGCLEELNELARLFNAKLKKLLAELRRELPG 234 (315)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcEEEecCCCCcCccHHHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 899999999999999999999999999999999999999876433356899999999999999999999999999885
No 3
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional
Probab=100.00 E-value=2e-43 Score=326.08 Aligned_cols=185 Identities=21% Similarity=0.288 Sum_probs=151.5
Q ss_pred CCCCCCEEEEeCCccccCCCCCCccccccCCCCCCccCCCCCCCccccCCCccHHHHHHHhcCCCCCCCCCCCCCcCCCC
Q 024071 31 AAPLVPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKN 110 (273)
Q Consensus 31 ~~~~~~~l~vFGDSlsD~Gn~~~~~~~~~~~~~PyG~~~~~~~~tGRfSnG~~~~d~la~~lgl~~~~ppyl~~~~~~~~ 110 (273)
....|++||+|||||+|+||+.+..+. ...||||++| +||||||++|+|||| .|||+.
T Consensus 138 ~~~~~~ai~vFGDSlsDtGnn~y~~t~--~~~PPyG~~f-----tGRFSNG~v~~DfLA--------~~pyl~------- 195 (408)
T PRK15381 138 SLGDITRLVFFGDSLSDSLGRMFEKTH--HILPSYGQYF-----GGRFTNGFTWTEFLS--------SPHFLG------- 195 (408)
T ss_pred ccCCCCeEEEeCCccccCCCccccccc--cCCCCCCCCC-----CcccCCCchhhheec--------cccccC-------
Confidence 346799999999999999887665432 4689999876 799999999999998 245764
Q ss_pred CcCCcceeccCccccCCCC-C-c-ccccChHHHHHHHHHHHHHHHHHhCchhhhhhhcCcEEEEEeCcchhhhhhhcCCc
Q 024071 111 LLIGANFASAGSGYDDRTS-Y-L-NHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPL 187 (273)
Q Consensus 111 ~~~G~NfA~gGA~~~~~~~-~-~-~~~~~l~~Qv~~f~~~~~~~~~~~G~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~ 187 (273)
.+|+|||+|||++..... . . ...++|.+||++|.. .+++||+||+|+|||+ ++
T Consensus 196 -~~G~NFA~GGA~~~t~~~~~~~~~~~~~L~~Qv~~~~~-----------------~~~aL~lV~iG~NDy~-~~----- 251 (408)
T PRK15381 196 -KEMLNFAEGGSTSASYSCFNCIGDFVSNTDRQVASYTP-----------------SHQDLAIFLLGANDYM-TL----- 251 (408)
T ss_pred -CCCceEeecccccccccccccccCccCCHHHHHHHHHh-----------------cCCcEEEEEeccchHH-Hh-----
Confidence 168999999999873211 0 0 124689999998642 1689999999999997 33
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHHhhcCccEEEEeCCCCCCCCCchhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Q 024071 188 LNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKASWRQQEV 267 (273)
Q Consensus 188 ~~~~~~~~~~v~~vv~~i~~~i~~L~~~GAR~~vV~~lpplGc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~L 267 (273)
..++++.+++++.+.|++||++|||||+|+|+||+||+|..+.. ...+.+|++++.||++|+++|++|
T Consensus 252 ------~~~~v~~vV~~~~~~l~~Ly~lGARk~vV~nlpPlGC~P~~~~~------~~~~~~N~~a~~fN~~L~~~L~~L 319 (408)
T PRK15381 252 ------HKDNVIMVVEQQIDDIEKIISGGVNNVLVMGIPDLSLTPYGKHS------DEKRKLKDESIAHNALLKTNVEEL 319 (408)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCcchhhcc------CchHHHHHHHHHHHHHHHHHHHHH
Confidence 12467889999999999999999999999999999999998632 235899999999999999999999
Q ss_pred HHhCCC
Q 024071 268 AVEQEL 273 (273)
Q Consensus 268 ~~~~p~ 273 (273)
++++||
T Consensus 320 ~~~~pg 325 (408)
T PRK15381 320 KEKYPQ 325 (408)
T ss_pred HHhCCC
Confidence 999986
No 4
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Members of this subfamily might hydrolyze triacylglycerol into diacylglycerol and fatty acid anions.
Probab=100.00 E-value=9e-43 Score=310.75 Aligned_cols=200 Identities=20% Similarity=0.205 Sum_probs=161.1
Q ss_pred CCEEEEeCCccccCCCCCCccccccCCCCCCccCCCCCCCccccCCCccHHHHHHHhcCCCCCCCCCCCCCcCCCCCcCC
Q 024071 35 VPAIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIG 114 (273)
Q Consensus 35 ~~~l~vFGDSlsD~Gn~~~~~~~~~~~~~PyG~~~~~~~~tGRfSnG~~~~d~la~~lgl~~~~ppyl~~~~~~~~~~~G 114 (273)
|++||||||||+|+||++++. ++ ++|+||||||++++|++++.+|++ ++ +.+ ...+..+|
T Consensus 1 ~~~i~vFGDSl~D~Gn~~~~~--------~~------~~~~gRFsnG~~~~d~~~~~~~~~-~~---~~~--~~~~~~~G 60 (281)
T cd01847 1 FSRVVVFGDSLSDVGTYNRAG--------VG------AAGGGRFTVNDGSIWSLGVAEGYG-LT---TGT--ATPTTPGG 60 (281)
T ss_pred CCceEEecCcccccCCCCccc--------cC------CCCCcceecCCcchHHHHHHHHcC-CC---cCc--CcccCCCC
Confidence 579999999999999987652 11 138999999999999999999987 32 221 24567889
Q ss_pred cceeccCccccCCCCCc---ccccChHHHHHHHHHHHHHHHHHhCchhhhhhhcCcEEEEEeCcchhhhhhhcCCc-cCC
Q 024071 115 ANFASAGSGYDDRTSYL---NHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPL-LNK 190 (273)
Q Consensus 115 ~NfA~gGA~~~~~~~~~---~~~~~l~~Qv~~f~~~~~~~~~~~G~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~-~~~ 190 (273)
+|||+|||++.+.+... ...++|.+||++|++.+. ...+++||+||||+|||+..+..... ..+
T Consensus 61 ~NfA~gGa~~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~------------~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~ 128 (281)
T cd01847 61 TNYAQGGARVGDTNNGNGAGAVLPSVTTQIANYLAAGG------------GFDPNALYTVWIGGNDLIAALAALTTATTT 128 (281)
T ss_pred ceeeccCccccCCCCccccccCCCCHHHHHHHHHHhcC------------CCCCCeEEEEecChhHHHHHHhhccccccc
Confidence 99999999998754311 235789999999987542 24699999999999999976543221 011
Q ss_pred CCChHHHHHHHHHHHHHHHHHHhhcCccEEEEeCCCCCCCCCchhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHh
Q 024071 191 VYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKASWRQQEVAVE 270 (273)
Q Consensus 191 ~~~~~~~v~~vv~~i~~~i~~L~~~GAR~~vV~~lpplGc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~L~~~ 270 (273)
..+..++++.+++++...|++||++|||+|+|+|+||+||+|.++... ..|.+.+|++++.||++|+++|++|+++
T Consensus 129 ~~~~~~~~~~~~~~~~~~v~~L~~~GAr~ilv~~lpplgc~P~~~~~~----~~~~~~~n~~~~~~N~~L~~~l~~l~~~ 204 (281)
T cd01847 129 QAAAVAAAATAAADLASQVKNLLDAGARYILVPNLPDVSYTPEAAGTP----AAAAALASALSQTYNQTLQSGLNQLGAN 204 (281)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHCCCCEEEEeCCCCcccCcchhhcc----chhHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 134678999999999999999999999999999999999999987652 3699999999999999999999998763
No 5
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols.
Probab=100.00 E-value=2.2e-37 Score=274.02 Aligned_cols=195 Identities=25% Similarity=0.355 Sum_probs=155.0
Q ss_pred EEEEeCCccccCCCCCCccccccCCCCCCccCCCCCCCccccCCCccHHHHHHHhcCCCCCCCCCCCCCcCCCCCcCCcc
Q 024071 37 AIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGAN 116 (273)
Q Consensus 37 ~l~vFGDSlsD~Gn~~~~~~~~~~~~~PyG~~~~~~~~tGRfSnG~~~~d~la~~lgl~~~~ppyl~~~~~~~~~~~G~N 116 (273)
++|+|||||+|+||..++... ..+|.+..| |+||||||++|+|+||+.+|++ . ..+|+|
T Consensus 1 ~l~vFGDS~sD~Gn~~~~~~~---~~~~~~~~~----~~grfsnG~~w~d~la~~lg~~-~-------------~~~~~N 59 (270)
T cd01846 1 RLVVFGDSLSDTGNIFKLTGG---SNPPPSPPY----FGGRFSNGPVWVEYLAATLGLS-G-------------LKQGYN 59 (270)
T ss_pred CeEEeeCccccCCcchhhcCC---CCCCCCCCC----CCCccCCchhHHHHHHHHhCCC-c-------------cCCcce
Confidence 589999999999998654321 123333323 7899999999999999999986 2 246899
Q ss_pred eeccCccccCCCC--CcccccChHHHHHHHHHHHHHHHHHhCchhhhhhhcCcEEEEEeCcchhhhhhhcCCccCCCCCh
Q 024071 117 FASAGSGYDDRTS--YLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTP 194 (273)
Q Consensus 117 fA~gGA~~~~~~~--~~~~~~~l~~Qv~~f~~~~~~~~~~~G~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~ 194 (273)
||+|||++.+... ......+|..||++|++..+. +..+++|++||+|+||+...+.. ....
T Consensus 60 ~A~~Ga~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~-----------~~~~~~l~~i~~G~ND~~~~~~~------~~~~ 122 (270)
T cd01846 60 YAVGGATAGAYNVPPYPPTLPGLSDQVAAFLAAHKL-----------RLPPDTLVAIWIGANDLLNALDL------PQNP 122 (270)
T ss_pred eEecccccCCcccCCCCCCCCCHHHHHHHHHHhccC-----------CCCCCcEEEEEeccchhhhhccc------cccc
Confidence 9999999876542 112357899999999876431 34688999999999999864422 1234
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCccEEEEeCCCCCCCCCchhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 024071 195 EQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKASWRQQEVAVEQEL 273 (273)
Q Consensus 195 ~~~v~~vv~~i~~~i~~L~~~GAR~~vV~~lpplGc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~L~~~~p~ 273 (273)
..+++++++++.+.|++|+++|+|+|+|+++||+||+|.++..... ..+.+|.+++.||++|++++++|++++|+
T Consensus 123 ~~~~~~~~~~~~~~i~~l~~~g~~~i~v~~~p~~~~~P~~~~~~~~----~~~~~~~~~~~~N~~L~~~l~~l~~~~~~ 197 (270)
T cd01846 123 DTLVTRAVDNLFQALQRLYAAGARNFLVLNLPDLGLTPAFQAQGDA----VAARATALTAAYNAKLAEKLAELKAQHPG 197 (270)
T ss_pred cccHHHHHHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccCCcc----cHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4678899999999999999999999999999999999999865431 12689999999999999999999998875
No 6
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=99.83 E-value=3.5e-20 Score=166.17 Aligned_cols=220 Identities=20% Similarity=0.233 Sum_probs=143.9
Q ss_pred cCCCCCCEEEEeCCccccCCCCCCccccccCCCC-CCccCCCCCCCccccC--CCccHHHHHHHhcCCCCCCCCC----C
Q 024071 30 DAAPLVPAIITFGDSAVDVGNNNYLATLFKANYP-PYGRDFINHQPTGRFC--NGKLATDFTADTLGFKTYAPAY----L 102 (273)
Q Consensus 30 ~~~~~~~~l~vFGDSlsD~Gn~~~~~~~~~~~~~-PyG~~~~~~~~tGRfS--nG~~~~d~la~~lgl~~~~ppy----l 102 (273)
...++|..++||||||||+|+...... ....+ =||. ++..++. +|..|.++.++.+|.-...+.+ .
T Consensus 24 ~~~~~~~~l~vfGDSlSDsg~~~~~a~--~~~~~~~~~~-----~~gp~~~~G~~~~~~~~~p~~lg~l~~~~~~~~~~~ 96 (370)
T COG3240 24 PSLAPFQRLVVFGDSLSDSGNYYRPAG--HHGDPGSYGT-----IPGPSYQNGNGYTYVTVVPETLGQLGVNHDFTYAAA 96 (370)
T ss_pred ccccccceEEEeccchhhcccccCccc--ccCCcccccc-----ccCCcccCCCceeeeccchhhhcccccccccccccc
Confidence 355789999999999999999753321 11111 1221 1333444 4677888888888711000111 1
Q ss_pred CCCcCCCCCcCCcceeccCccccCCC--C-CcccccChHHHHHHHHHHHHHHHHHhCc-hhhhhhhcCcEEEEEeCcchh
Q 024071 103 SPQATGKNLLIGANFASAGSGYDDRT--S-YLNHAISLTQQLQYYREYQSKLAKVAGS-KQSASIIKDAIYIVGSGSGDF 178 (273)
Q Consensus 103 ~~~~~~~~~~~G~NfA~gGA~~~~~~--~-~~~~~~~l~~Qv~~f~~~~~~~~~~~G~-~~~~~~~~~sL~~i~iG~ND~ 178 (273)
+++...--...|.|||+|||++.... . ......++.+|+.+|.......- .++ ...-......|+.+|.|+|||
T Consensus 97 ~~~~~~~~~a~gnd~A~gga~~~~~~~~~~i~~~~~~~~~Qv~~~l~a~~~~~--v~~~~~~~~l~p~~l~~~~ggand~ 174 (370)
T COG3240 97 DPNGLYIHWAGGNDLAVGGARSTEPNTGNSIGASATSLAQQVGAFLAAGQGGF--VWPNYPAQGLDPSALYFLWGGANDY 174 (370)
T ss_pred CcccccCcccccccHhhhccccccccccccccccccchHHHHHHHHHhcCCcc--ccccccccccCHHHHHHHhhcchhh
Confidence 22111112257999999999986544 1 22457889999999988654310 001 111234577889999999999
Q ss_pred hhhhhcCCccCCCCChHHHHHHHHHHHHHHHHHHhhcCccEEEEeCCCCCCCCCchhhccCCCCCCchHHHHHHHHHHHH
Q 024071 179 LQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNK 258 (273)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~GAR~~vV~~lpplGc~P~~~~~~~~~~~~c~~~~n~~~~~~N~ 258 (273)
+..-..+ ....+.+.....+.++..|++|.+.|||+++|+++|+++.+|...... .-.+.+.+.+..||.
T Consensus 175 ~~~~~~~-----a~~~q~~~~~~~~~~~~~Vq~L~~AGA~~i~v~~lpDl~l~P~~~~~~-----~~~~~a~~~t~~~Na 244 (370)
T COG3240 175 LALPMLK-----AAAYQQLEGSTKADQSSAVQRLIAAGARNILVMTLPDLSLTPAGKAYG-----TEAIQASQATIAFNA 244 (370)
T ss_pred hcccccc-----hhhhHHHhcchhhHHHHHHHHHHHhhccEEEEeecccccccccccccc-----chHHHHHHHHHHHHH
Confidence 7531111 111223334445679999999999999999999999999999986532 123378899999999
Q ss_pred HHHHHHHHHH
Q 024071 259 KASWRQQEVA 268 (273)
Q Consensus 259 ~L~~~l~~L~ 268 (273)
.|+..|++++
T Consensus 245 ~L~~~L~~~g 254 (370)
T COG3240 245 SLTSQLEQLG 254 (370)
T ss_pred HHHHHHHHhc
Confidence 9999999987
No 7
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified []. Members of this entry include; Aeromonas hydrophila lipase, Vibrio mimicus arylesterase, Vibrio parahaemolyticus thermolabile haemolysin, rabbit phospholipase (AdRab-B), and Brassica napus anter-specific proline-rich protein.; GO: 0016788 hydrolase activity, acting on ester bonds, 0006629 lipid metabolic process; PDB: 2WAO_A 2WAB_A 1V2G_A 1U8U_A 1JRL_A 1IVN_A 1J00_A 1DEO_A 1K7C_A 1PP4_A ....
Probab=99.76 E-value=5.9e-18 Score=144.76 Aligned_cols=179 Identities=23% Similarity=0.317 Sum_probs=120.8
Q ss_pred EEEeCCccccCCCCCCccccccCCCCCCccCCCCCCCccccCCCccHHHHHHHhcCCCCCCCCCCCCCcCCCCCcCCcce
Q 024071 38 IITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANF 117 (273)
Q Consensus 38 l~vFGDSlsD~Gn~~~~~~~~~~~~~PyG~~~~~~~~tGRfSnG~~~~d~la~~lgl~~~~ppyl~~~~~~~~~~~G~Nf 117 (273)
|++||||++|. +|+++|.+|.+.+++.+.-. .. . + ....-..+.|+
T Consensus 1 i~~fGDS~td~---------------------------~~~~~~~~~~~~~~~~l~~~-~~--~-~---~~~~~~~~~n~ 46 (234)
T PF00657_consen 1 IVVFGDSLTDG---------------------------GGDSNGGGWPEGLANNLSSC-LG--A-N---QRNSGVDVSNY 46 (234)
T ss_dssp EEEEESHHHHT---------------------------TTSSTTCTHHHHHHHHCHHC-CH--H-H---HHCTTEEEEEE
T ss_pred CEEEeehhccc---------------------------CCCCCCcchhhhHHHHHhhc-cc--c-c---cCCCCCCeecc
Confidence 68999999999 25678899999999887221 00 0 0 00111346899
Q ss_pred eccCccccCCCCCc-ccccChHHHHHHHHHHHHHHHHHhCchhhhhhhcCcEEEEEeCcchhhhhhhcCCccCCCCChHH
Q 024071 118 ASAGSGYDDRTSYL-NHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQ 196 (273)
Q Consensus 118 A~gGA~~~~~~~~~-~~~~~l~~Qv~~f~~~~~~~~~~~G~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~ 196 (273)
|.+|+++....... .....+..|+...... ....+.+|++||+|+||++.. . .......
T Consensus 47 a~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~lv~i~~G~ND~~~~--~-----~~~~~~~ 106 (234)
T PF00657_consen 47 AISGATSDGDLYNLWAQVQNISQQISRLLDS-------------KSFYDPDLVVIWIGTNDYFNN--R-----DSSDNNT 106 (234)
T ss_dssp E-TT--CC-HGGCCCCTCHHHHHHHHHHHHH-------------HHHHTTSEEEEE-SHHHHSSC--C-----SCSTTHH
T ss_pred ccCCCccccccchhhHHHHHHHHHhhccccc-------------cccCCcceEEEecccCcchhh--c-----ccchhhh
Confidence 99999875321000 0011122223222111 134578899999999999641 1 1224567
Q ss_pred HHHHHHHHHHHHHHHHhhcCcc-----EEEEeCCCCCCCCCchhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhC
Q 024071 197 YSSMLVNIFSSFIKNMYGLGAR-----KFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKASWRQQEVAVEQ 271 (273)
Q Consensus 197 ~v~~vv~~i~~~i~~L~~~GAR-----~~vV~~lpplGc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~L~~~~ 271 (273)
.++.+++.+.+.|++|++.|+| ++++.++||++|.|....... ....|.+.+++.++.||++|++.+++|++++
T Consensus 107 ~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~n~~l~~~~~~l~~~~ 185 (234)
T PF00657_consen 107 SVEEFVENLRNAIKRLRSNGARLIIVANIVVINLPPIGCLPAWSSNNK-DSASCIERLNAIVAAFNSALREVAAQLRKDY 185 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTEEEEEEEEEEEHHC-GGGSTTHHHTHT-TTCTTHHHHHHHHHHHHHHHHHHHHHHHHCH
T ss_pred hHhhHhhhhhhhhhHHhccCCccccccccccccccccccccccccccc-cccccchhhHHHHHHHHHHHHHHhhhccccc
Confidence 7889999999999999999999 999999999999998766532 2468999999999999999999999887653
No 8
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A. tumefaciens. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.36 E-value=9.7e-06 Score=68.73 Aligned_cols=143 Identities=11% Similarity=0.074 Sum_probs=78.9
Q ss_pred ccCCCccHHHHHHHhcCCCCCCCCCCCCCcCCCCCcCCcceeccCccccCCCCCcccccChHHHHHHHHHHHHHHHHHhC
Q 024071 77 RFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAG 156 (273)
Q Consensus 77 RfSnG~~~~d~la~~lgl~~~~ppyl~~~~~~~~~~~G~NfA~gGA~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~G 156 (273)
|++.+..|+..|++.|+-. . +. ..-+|.+++|.++..... .......++.+.+...
T Consensus 20 ~~~~~~~w~~~L~~~l~~~-~-~~-----------~~viN~Gv~G~tt~~~~~----~~~~~~~l~~l~~~l~------- 75 (208)
T cd01839 20 RYPFEDRWPGVLEKALGAN-G-EN-----------VRVIEDGLPGRTTVLDDP----FFPGRNGLTYLPQALE------- 75 (208)
T ss_pred cCCcCCCCHHHHHHHHccC-C-CC-----------eEEEecCcCCcceeccCc----cccCcchHHHHHHHHH-------
Confidence 4556778999999987643 1 11 123789999988642210 0011112222322221
Q ss_pred chhhhhhhcCcEEEEEeCcchhhhhhhcCCccCCCCChHHHHHHHHHHHHHHHHHHhhc------CccEEEEeCCCCCCC
Q 024071 157 SKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGL------GARKFGVTSLPPLGC 230 (273)
Q Consensus 157 ~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~------GAR~~vV~~lpplGc 230 (273)
....-++++|++|.||+...+. .+. +...+++.+.++.+.+. +..++++...||+-.
T Consensus 76 -----~~~~pd~vii~lGtND~~~~~~--------~~~----~~~~~~l~~lv~~i~~~~~~~~~~~~~iil~~pp~~~~ 138 (208)
T cd01839 76 -----SHSPLDLVIIMLGTNDLKSYFN--------LSA----AEIAQGLGALVDIIRTAPIEPGMPAPKILIVAPPPIRT 138 (208)
T ss_pred -----hCCCCCEEEEeccccccccccC--------CCH----HHHHHHHHHHHHHHHhccccccCCCCCEEEEeCCccCc
Confidence 1124578999999999863211 122 23344444555555443 467788888887722
Q ss_pred CCchhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Q 024071 231 LPAARTLFGYHESGCVSRINTDAQQFNKKASWRQQEV 267 (273)
Q Consensus 231 ~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~L 267 (273)
.+.. ...+....|...+.||+.+++..++.
T Consensus 139 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~a~~~ 168 (208)
T cd01839 139 PKGS-------LAGKFAGAEEKSKGLADAYRALAEEL 168 (208)
T ss_pred cccc-------hhhhhccHHHHHHHHHHHHHHHHHHh
Confidence 2111 11233445777888888888776654
No 9
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=98.30 E-value=1.1e-05 Score=66.82 Aligned_cols=143 Identities=19% Similarity=0.189 Sum_probs=83.6
Q ss_pred EEEEeCCccccCCCCCCccccccCCCCCCccCCCCCCCccccCCCccHHHHHHHhcCCCCCCCCCCCCCcCCCCCcCCcc
Q 024071 37 AIITFGDSAVDVGNNNYLATLFKANYPPYGRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGAN 116 (273)
Q Consensus 37 ~l~vFGDSlsD~Gn~~~~~~~~~~~~~PyG~~~~~~~~tGRfSnG~~~~d~la~~lgl~~~~ppyl~~~~~~~~~~~G~N 116 (273)
+|++||||++. |... ++....+..|++.+++.+.-+ . +. ..-.|
T Consensus 1 ~i~~~GDSit~-G~~~----------------------~~~~~~~~~~~~~l~~~l~~~-~-~~-----------~~~~N 44 (185)
T cd01832 1 RYVALGDSITE-GVGD----------------------PVPDGGYRGWADRLAAALAAA-D-PG-----------IEYAN 44 (185)
T ss_pred CeeEecchhhc-ccCC----------------------CCCCCccccHHHHHHHHhccc-C-CC-----------ceEee
Confidence 47899999887 3321 001123578999999987532 0 00 12369
Q ss_pred eeccCccccCCCCCcccccChHHHHHHHHHHHHHHHHHhCchhhhhhhcCcEEEEEeCcchhhhhhhcCCccCCCCChHH
Q 024071 117 FASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQ 196 (273)
Q Consensus 117 fA~gGA~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~G~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~ 196 (273)
++.+|+++.. .+..|++. .. . ..-.+++|.+|.||... . ..++
T Consensus 45 ~g~~G~~~~~---------~~~~~~~~---~~-------------~-~~~d~vii~~G~ND~~~---~------~~~~-- 87 (185)
T cd01832 45 LAVRGRRTAQ---------ILAEQLPA---AL-------------A-LRPDLVTLLAGGNDILR---P------GTDP-- 87 (185)
T ss_pred ccCCcchHHH---------HHHHHHHH---HH-------------h-cCCCEEEEecccccccc---C------CCCH--
Confidence 9999997521 01122211 10 0 14468899999999853 0 1122
Q ss_pred HHHHHHHHHHHHHHHHhhcCccEEEEeCCCCC-CCCCchhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Q 024071 197 YSSMLVNIFSSFIKNMYGLGARKFGVTSLPPL-GCLPAARTLFGYHESGCVSRINTDAQQFNKKASWRQQEV 267 (273)
Q Consensus 197 ~v~~vv~~i~~~i~~L~~~GAR~~vV~~lppl-Gc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~L 267 (273)
.+..+++...|+++...+++ +++.++||. +..|.. ...+...+.+|+.|++..++.
T Consensus 88 --~~~~~~~~~~i~~i~~~~~~-vil~~~~~~~~~~~~~------------~~~~~~~~~~n~~l~~~a~~~ 144 (185)
T cd01832 88 --DTYRADLEEAVRRLRAAGAR-VVVFTIPDPAVLEPFR------------RRVRARLAAYNAVIRAVAARY 144 (185)
T ss_pred --HHHHHHHHHHHHHHHhCCCE-EEEecCCCccccchhH------------HHHHHHHHHHHHHHHHHHHHc
Confidence 34555666677777666775 777788887 322221 123456778888888776654
No 10
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.13 E-value=4.9e-05 Score=63.35 Aligned_cols=82 Identities=16% Similarity=0.239 Sum_probs=54.0
Q ss_pred cCcEEEEEeCcchhhhhhhcCCccCCCCChHHHHHHHHHHHHHHHHHHhh-cCccEEEEeCCCCCCCCCchhhccCCCCC
Q 024071 165 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYG-LGARKFGVTSLPPLGCLPAARTLFGYHES 243 (273)
Q Consensus 165 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~-~GAR~~vV~~lpplGc~P~~~~~~~~~~~ 243 (273)
.-.+++|.+|+||+... .+ .++..+++.+.++++.+ ....+|+|.++||.++.|....
T Consensus 67 ~pd~Vii~~G~ND~~~~----------~~----~~~~~~~l~~li~~i~~~~~~~~iiv~~~p~~~~~~~~~~------- 125 (191)
T cd01836 67 RFDVAVISIGVNDVTHL----------TS----IARWRKQLAELVDALRAKFPGARVVVTAVPPLGRFPALPQ------- 125 (191)
T ss_pred CCCEEEEEecccCcCCC----------CC----HHHHHHHHHHHHHHHHhhCCCCEEEEECCCCcccCCCCcH-------
Confidence 44788999999998531 12 23455666666676665 3556889999999987764321
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHH
Q 024071 244 GCVSRINTDAQQFNKKASWRQQEV 267 (273)
Q Consensus 244 ~c~~~~n~~~~~~N~~L~~~l~~L 267 (273)
.....+++..+.+|+.+++..++.
T Consensus 126 ~~~~~~~~~~~~~n~~~~~~a~~~ 149 (191)
T cd01836 126 PLRWLLGRRARLLNRALERLASEA 149 (191)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC
Confidence 123345666778888887766553
No 11
>cd01823 SEST_like SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.
Probab=97.91 E-value=0.00027 Score=61.85 Aligned_cols=153 Identities=10% Similarity=-0.035 Sum_probs=80.7
Q ss_pred CccHHHHHHHhcCCCCCCCCCCCCCcCCCCCcCCcceeccCccccCCCCCcccccChHHHHHHHHHHHHHHHHHhCchhh
Q 024071 81 GKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQS 160 (273)
Q Consensus 81 G~~~~d~la~~lgl~~~~ppyl~~~~~~~~~~~G~NfA~gGA~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~G~~~~ 160 (273)
.+.|++++++.|+.. + ..-.|+|.+|+++.+.... .......|.+.
T Consensus 31 ~~~y~~~la~~l~~~---~------------~~~~n~a~sGa~~~~~~~~--~~~~~~~~~~~----------------- 76 (259)
T cd01823 31 SNSYPTLLARALGDE---T------------LSFTDVACSGATTTDGIEP--QQGGIAPQAGA----------------- 76 (259)
T ss_pred CccHHHHHHHHcCCC---C------------ceeeeeeecCccccccccc--ccCCCchhhcc-----------------
Confidence 468999999998743 0 1236999999998654311 00111111110
Q ss_pred hhhhcCcEEEEEeCcchhhhhhhc-----CCcc--------CCCCChHHHHHHHHHHHHHHHHHHhhc-CccEEEEeCCC
Q 024071 161 ASIIKDAIYIVGSGSGDFLQNYYV-----NPLL--------NKVYTPEQYSSMLVNIFSSFIKNMYGL-GARKFGVTSLP 226 (273)
Q Consensus 161 ~~~~~~sL~~i~iG~ND~~~~~~~-----~~~~--------~~~~~~~~~v~~vv~~i~~~i~~L~~~-GAR~~vV~~lp 226 (273)
-...-.+++|.||+||+...... .... ..........+...+++...|++|.+. .--+|++.+.|
T Consensus 77 -l~~~~dlV~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~i~~~~p~a~I~~~gyp 155 (259)
T cd01823 77 -LDPDTDLVTITIGGNDLGFADVVKACILTGGGSSLAQEKGAADGARDAALDEVGARLKAVLDRIRERAPNARVVVVGYP 155 (259)
T ss_pred -cCCCCCEEEEEECccccchHHHHHHHhhccCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEeccc
Confidence 01235789999999998542211 0000 000011233445566677777777653 33468888877
Q ss_pred CCCCC----Cchh-hccCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 024071 227 PLGCL----PAAR-TLFGYHESGCVSRINTDAQQFNKKASWRQQEVA 268 (273)
Q Consensus 227 plGc~----P~~~-~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~L~ 268 (273)
++--. |... .....-.....+.+++....+|+.+++..++..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~i~~~a~~~~ 202 (259)
T cd01823 156 RLFPPDGGDCDKSCSPGTPLTPADRPELNQLVDKLNALIRRAAADAG 202 (259)
T ss_pred ccccCCCCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 65210 0000 000000012345677888888888887766543
No 12
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=97.88 E-value=0.00049 Score=56.84 Aligned_cols=78 Identities=19% Similarity=0.185 Sum_probs=47.1
Q ss_pred cCcEEEEEeCcchhhhhhhcCCccCCCCChHHHHHHHHHHHHHHHHHHhhcCccEEEEeCCCCCCCCCchhhccCCCCCC
Q 024071 165 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESG 244 (273)
Q Consensus 165 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~GAR~~vV~~lpplGc~P~~~~~~~~~~~~ 244 (273)
.-++++|.+|.||.... ... ++..+.+++.|+.+.+.|++ +++...+|....+.. .
T Consensus 59 ~~d~v~i~~G~ND~~~~----------~~~----~~~~~~~~~li~~~~~~~~~-~il~~~~p~~~~~~~---------~ 114 (183)
T cd04501 59 KPAVVIIMGGTNDIIVN----------TSL----EMIKDNIRSMVELAEANGIK-VILASPLPVDDYPWK---------P 114 (183)
T ss_pred CCCEEEEEeccCccccC----------CCH----HHHHHHHHHHHHHHHHCCCc-EEEEeCCCcCccccc---------h
Confidence 34688899999998531 122 34456666777777777876 444555665433221 1
Q ss_pred chHHHHHHHHHHHHHHHHHHHH
Q 024071 245 CVSRINTDAQQFNKKASWRQQE 266 (273)
Q Consensus 245 c~~~~n~~~~~~N~~L~~~l~~ 266 (273)
+....+.....||+.+++..++
T Consensus 115 ~~~~~~~~~~~~n~~~~~~a~~ 136 (183)
T cd04501 115 QWLRPANKLKSLNRWLKDYARE 136 (183)
T ss_pred hhcchHHHHHHHHHHHHHHHHH
Confidence 1123456677888888777655
No 13
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A ....
Probab=97.82 E-value=0.00058 Score=54.98 Aligned_cols=81 Identities=16% Similarity=0.222 Sum_probs=52.7
Q ss_pred cCcEEEEEeCcchhhhhhhcCCccCCCCChHHHHHHHHHHHHHHHHHHhhcCccEEEEeCCCCCCCCCchhhccCCCCCC
Q 024071 165 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESG 244 (273)
Q Consensus 165 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~GAR~~vV~~lpplGc~P~~~~~~~~~~~~ 244 (273)
.-.+++|.+|+||.... .......++....+.+.|+++...+ +++++.++|..-.+...
T Consensus 61 ~~d~vvi~~G~ND~~~~----------~~~~~~~~~~~~~l~~~i~~~~~~~--~vi~~~~~~~~~~~~~~--------- 119 (179)
T PF13472_consen 61 KPDLVVISFGTNDVLNG----------DENDTSPEQYEQNLRRIIEQLRPHG--PVILVSPPPRGPDPRDP--------- 119 (179)
T ss_dssp TCSEEEEE--HHHHCTC----------TTCHHHHHHHHHHHHHHHHHHHTTS--EEEEEE-SCSSSSTTTT---------
T ss_pred CCCEEEEEccccccccc----------ccccccHHHHHHHHHHHHHhhcccC--cEEEecCCCcccccccc---------
Confidence 44588999999999641 0223456677888888888888878 88888887766443321
Q ss_pred chHHHHHHHHHHHHHHHHHHHH
Q 024071 245 CVSRINTDAQQFNKKASWRQQE 266 (273)
Q Consensus 245 c~~~~n~~~~~~N~~L~~~l~~ 266 (273)
+..........+|+.+++..++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~a~~ 141 (179)
T PF13472_consen 120 KQDYLNRRIDRYNQAIRELAKK 141 (179)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHH
T ss_pred cchhhhhhHHHHHHHHHHHHHH
Confidence 2334556677888888776554
No 14
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.67 E-value=0.0012 Score=54.63 Aligned_cols=53 Identities=15% Similarity=0.096 Sum_probs=31.8
Q ss_pred cCcEEEEEeCcchhhhhhhcCCccCCCCChHHHHHHHHHHHHHHHHHHhhcCc-cEEEEeCCCCCC
Q 024071 165 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGA-RKFGVTSLPPLG 229 (273)
Q Consensus 165 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~GA-R~~vV~~lpplG 229 (273)
.-++++|.+|.||..... . ... ++..+++...|+++.+.+. .++++.+.+|..
T Consensus 67 ~pd~Vii~~G~ND~~~~~---~-----~~~----~~~~~~l~~li~~i~~~~~~~~iil~t~~p~~ 120 (188)
T cd01827 67 NPNIVIIKLGTNDAKPQN---W-----KYK----DDFKKDYETMIDSFQALPSKPKIYICYPIPAY 120 (188)
T ss_pred CCCEEEEEcccCCCCCCC---C-----ccH----HHHHHHHHHHHHHHHHHCCCCeEEEEeCCccc
Confidence 346899999999985311 0 112 2334556666666665543 467777666643
No 15
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.65 E-value=0.0015 Score=55.22 Aligned_cols=56 Identities=14% Similarity=0.122 Sum_probs=35.9
Q ss_pred cEEEEEeCcchhhhhhhcCCccCCCCChHHHHHHHHHHHHHHHHHHhhcCccEEEEeCCCCCC
Q 024071 167 AIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLG 229 (273)
Q Consensus 167 sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~GAR~~vV~~lpplG 229 (273)
.+++|.+|.||......... .....++...+++...++++.+.|+ ++++.+++|..
T Consensus 76 ~~vii~~G~ND~~~~~~~~~------~~~~~~~~~~~~l~~ii~~~~~~~~-~vil~t~~P~~ 131 (204)
T cd01830 76 RTVIILEGVNDIGASGTDFA------AAPVTAEELIAGYRQLIRRAHARGI-KVIGATITPFE 131 (204)
T ss_pred CEEEEecccccccccccccc------cCCCCHHHHHHHHHHHHHHHHHCCC-eEEEecCCCCC
Confidence 47888999999863211100 0111234566778888888888887 57777777754
No 16
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.64 E-value=0.0012 Score=54.53 Aligned_cols=84 Identities=15% Similarity=0.154 Sum_probs=53.4
Q ss_pred ccHHHHHHHhcCCCCCCCCCCCCCcCCCCCcCCcceeccCccccCCCCCcccccChHHHHHHHHHHHHHHHHHhCchhhh
Q 024071 82 KLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSA 161 (273)
Q Consensus 82 ~~~~d~la~~lgl~~~~ppyl~~~~~~~~~~~G~NfA~gGA~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~G~~~~~ 161 (273)
..|+..+++.+++. -+|.+++|++... .. +.+...
T Consensus 20 ~~~~~~~~~~~~~~------------------v~N~g~~G~~~~~------------~~---~~~~~~------------ 54 (177)
T cd01844 20 MAWTAILARRLGLE------------------VINLGFSGNARLE------------PE---VAELLR------------ 54 (177)
T ss_pred CcHHHHHHHHhCCC------------------eEEeeecccccch------------HH---HHHHHH------------
Confidence 47889999887755 2699999986321 01 111111
Q ss_pred hhhcCcEEEEEeCcchhhhhhhcCCccCCCCChHHHHHHHHHHHHHHHHHHhhcCc-cEEEEeCCCCC
Q 024071 162 SIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGA-RKFGVTSLPPL 228 (273)
Q Consensus 162 ~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~GA-R~~vV~~lppl 228 (273)
...-.+++|.+|.||... . .+..+++...+++|.+..- .+|++.+.+|.
T Consensus 55 -~~~pd~vii~~G~ND~~~------------~-----~~~~~~~~~~i~~i~~~~p~~~iil~~~~~~ 104 (177)
T cd01844 55 -DVPADLYIIDCGPNIVGA------------E-----AMVRERLGPLVKGLRETHPDTPILLVSPRYC 104 (177)
T ss_pred -hcCCCEEEEEeccCCCcc------------H-----HHHHHHHHHHHHHHHHHCcCCCEEEEecCCC
Confidence 124468899999999731 0 0556777778888877653 45777776664
No 17
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=97.63 E-value=0.0017 Score=54.46 Aligned_cols=45 Identities=13% Similarity=0.205 Sum_probs=31.3
Q ss_pred cCcEEEEEeCcchhhhhhhcCCccCCCCChHHHHHHHHHHHHHHHHHHhhcCccEEEEe
Q 024071 165 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVT 223 (273)
Q Consensus 165 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~GAR~~vV~ 223 (273)
+-++++|.+|.||.... .+ .+++.++++.-++++.+.|++.+++.
T Consensus 71 ~pd~Vii~~GtND~~~~----------~~----~~~~~~~l~~li~~~~~~~~~~ill~ 115 (191)
T PRK10528 71 QPRWVLVELGGNDGLRG----------FP----PQQTEQTLRQIIQDVKAANAQPLLMQ 115 (191)
T ss_pred CCCEEEEEeccCcCccC----------CC----HHHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 33788999999997421 12 23456677777777778898877763
No 18
>cd01824 Phospholipase_B_like Phospholipase-B_like. This subgroup of the SGNH-family of lipolytic enzymes may have both esterase and phospholipase-A/lysophospholipase activity. It's members may be involved in the conversion of phosphatidylcholine to fatty acids and glycerophosphocholine, perhaps in the context of dietary lipid uptake. Members may be membrane proteins. The tertiary fold of the SGNH-hydrolases is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; Its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases.
Probab=97.62 E-value=0.0047 Score=55.43 Aligned_cols=205 Identities=13% Similarity=0.068 Sum_probs=104.3
Q ss_pred CCCCCCEEEEeCCccccCCCCCCccccccCCCCCC-ccCCCCCCCccccCCCccHHHHHHHhcCCCCCCCCCCCCCcCCC
Q 024071 31 AAPLVPAIITFGDSAVDVGNNNYLATLFKANYPPY-GRDFINHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPQATGK 109 (273)
Q Consensus 31 ~~~~~~~l~vFGDSlsD~Gn~~~~~~~~~~~~~Py-G~~~~~~~~tGRfSnG~~~~d~la~~lgl~~~~ppyl~~~~~~~ 109 (273)
.+..++-|-.+|||++ .||...-.... .-.-.| |.+|..+ -.+.+.+=.+.+.+|-+. +-. + .-|-.......
T Consensus 6 rp~DI~viaA~GDSlt-ag~ga~~~~~~-~~~~e~rG~s~~~G-g~~~~~~~~Tlpnil~~f-np~-l-~G~s~~~~~~~ 79 (288)
T cd01824 6 RPGDIKVIAALGDSLT-AGNGAGSANNL-DLLTEYRGLSWSIG-GDSTLRGLTTLPNILREF-NPS-L-YGYSVGTGDET 79 (288)
T ss_pred ccccCeEEeecccccc-ccCCCCCCCcc-ccccccCCceEecC-CcccccccccHHHHHHHh-CCC-c-ccccCCCCCCC
Confidence 3456889999999997 34432100000 000112 4455322 122233345667766543 211 1 11111000011
Q ss_pred CCcCCcceeccCccccCCCCCcccccChHHHHHHHHHHHHHHHHHhCchhhhhhh-cCcEEEEEeCcchhhhhhhcCCcc
Q 024071 110 NLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASII-KDAIYIVGSGSGDFLQNYYVNPLL 188 (273)
Q Consensus 110 ~~~~G~NfA~gGA~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~G~~~~~~~~-~~sL~~i~iG~ND~~~~~~~~~~~ 188 (273)
.-....|+|+.|+++. .|..|++...+..++ .+ .-..- .=.|++|.||+||....... +
T Consensus 80 ~~~~~~N~av~Ga~s~----------dL~~qa~~lv~r~~~-----~~--~i~~~~dwklVtI~IG~ND~c~~~~~-~-- 139 (288)
T cd01824 80 LPDSGFNVAEPGAKSE----------DLPQQARLLVRRMKK-----DP--RVDFKNDWKLITIFIGGNDLCSLCED-A-- 139 (288)
T ss_pred CcccceeecccCcchh----------hHHHHHHHHHHHHhh-----cc--ccccccCCcEEEEEecchhHhhhccc-c--
Confidence 1235679999999863 456787765443221 00 00111 22378899999999752211 1
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHhhcCcc-EEEEeCCCCCCCCCchhhccC------CCCCCch--------HHHHHHH
Q 024071 189 NKVYTPEQYSSMLVNIFSSFIKNMYGLGAR-KFGVTSLPPLGCLPAARTLFG------YHESGCV--------SRINTDA 253 (273)
Q Consensus 189 ~~~~~~~~~v~~vv~~i~~~i~~L~~~GAR-~~vV~~lpplGc~P~~~~~~~------~~~~~c~--------~~~n~~~ 253 (273)
.. .......+++.+.++.|.+..-| .|++.++|++..++....... .....|. +.+.++.
T Consensus 140 -~~----~~~~~~~~nL~~~L~~Lr~~~P~~~V~lv~~~~~~~l~~~~~~p~~c~~~~~~~C~c~~~~~~~~~~~~~~~~ 214 (288)
T cd01824 140 -NP----GSPQTFVKNLRKALDILRDEVPRAFVNLVGLLNVASLRSLTKKPLQCETLLAPECPCLLGPTENSYQDLKKFY 214 (288)
T ss_pred -cC----cCHHHHHHHHHHHHHHHHHhCCCcEEEEEcCCCcHHHHHhccCCccccccCCCcCCCcCCCCcchHHHHHHHH
Confidence 01 22445567778888888877655 467777776654333221000 0012232 3667778
Q ss_pred HHHHHHHHHHHHH
Q 024071 254 QQFNKKASWRQQE 266 (273)
Q Consensus 254 ~~~N~~L~~~l~~ 266 (273)
..|++.+++..++
T Consensus 215 ~~y~~~~~eia~~ 227 (288)
T cd01824 215 KEYQNEVEEIVES 227 (288)
T ss_pred HHHHHHHHHHHhc
Confidence 8888888776654
No 19
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=97.57 E-value=0.0016 Score=54.01 Aligned_cols=91 Identities=12% Similarity=0.085 Sum_probs=48.8
Q ss_pred cCcEEEEEeCcchhhhhhhcCCccCCCCChHHHHHHHHHHHHHHHHHHhh--cCccEEEEeCCCCCCCCCchhhccCCCC
Q 024071 165 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYG--LGARKFGVTSLPPLGCLPAARTLFGYHE 242 (273)
Q Consensus 165 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~--~GAR~~vV~~lpplGc~P~~~~~~~~~~ 242 (273)
+-.+++|++|.||...... + ...+. +...++++..|+++-+ .|+ ++++++.||.+-........ ..
T Consensus 63 ~pd~vii~~G~ND~~~~~~--~---~~~~~----~~~~~~~~~~i~~~~~~~~~~-~ii~~t~~~~~~~~~~~~~~--~~ 130 (199)
T cd01838 63 QPDLVTIFFGANDAALPGQ--P---QHVPL----DEYKENLRKIVSHLKSLSPKT-KVILITPPPVDEEAWEKSLE--DG 130 (199)
T ss_pred CceEEEEEecCccccCCCC--C---CcccH----HHHHHHHHHHHHHHHhhCCCC-eEEEeCCCCCCHHHHhhhhc--cc
Confidence 5678999999999863211 0 00122 3344455555555555 455 57777777765322111000 00
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHH
Q 024071 243 SGCVSRINTDAQQFNKKASWRQQEV 267 (273)
Q Consensus 243 ~~c~~~~n~~~~~~N~~L~~~l~~L 267 (273)
.......|+..+.||+.+++..++.
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~a~~~ 155 (199)
T cd01838 131 GSQPGRTNELLKQYAEACVEVAEEL 155 (199)
T ss_pred cCCccccHHHHHHHHHHHHHHHHHh
Confidence 1123445677788888877765544
No 20
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=97.50 E-value=0.0038 Score=50.95 Aligned_cols=46 Identities=20% Similarity=0.279 Sum_probs=29.6
Q ss_pred cCcEEEEEeCcchhhhhhhcCCccCCCCChHHHHHHHHHHHHHHHHHHhhcCccEEEEeCC
Q 024071 165 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSL 225 (273)
Q Consensus 165 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~GAR~~vV~~l 225 (273)
.-.+++|.+|.||.... .+. .+..+++.+.++++.+.|++-+ +.+.
T Consensus 64 ~pd~v~i~~G~ND~~~~----------~~~----~~~~~~l~~li~~~~~~~~~vi-l~~~ 109 (177)
T cd01822 64 KPDLVILELGGNDGLRG----------IPP----DQTRANLRQMIETAQARGAPVL-LVGM 109 (177)
T ss_pred CCCEEEEeccCcccccC----------CCH----HHHHHHHHHHHHHHHHCCCeEE-EEec
Confidence 34688999999997421 122 3455667777777777787644 4443
No 21
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=97.40 E-value=0.0031 Score=52.85 Aligned_cols=53 Identities=9% Similarity=0.011 Sum_probs=32.3
Q ss_pred cCcEEEEEeCcchhhhhhhcCCccCCCCChHHHHHHHHHHHHHHHHHHhhcCccEEEEeCCCC
Q 024071 165 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPP 227 (273)
Q Consensus 165 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~GAR~~vV~~lpp 227 (273)
+-++++|.+|.||....... .... ++...+++.+.|+++-+.|++-++ +..+|
T Consensus 65 ~pdlVii~~G~ND~~~~~~~-----~~~~----~~~~~~nl~~ii~~~~~~~~~~il-~tp~~ 117 (198)
T cd01821 65 PGDYVLIQFGHNDQKPKDPE-----YTEP----YTTYKEYLRRYIAEARAKGATPIL-VTPVT 117 (198)
T ss_pred CCCEEEEECCCCCCCCCCCC-----CCCc----HHHHHHHHHHHHHHHHHCCCeEEE-ECCcc
Confidence 34789999999998532100 0112 344556677777777788886544 44444
No 22
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.38 E-value=0.00083 Score=55.49 Aligned_cols=51 Identities=14% Similarity=0.187 Sum_probs=31.9
Q ss_pred CcEEEEEeCcchhhhhhhcCCccCCCCChHHHHHHHHHHHHHHHHHHhhc-CccEEEEeCCCCCC
Q 024071 166 DAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGL-GARKFGVTSLPPLG 229 (273)
Q Consensus 166 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~-GAR~~vV~~lpplG 229 (273)
-.+++|.+|.||.... ..+ .+...+++...|+++.+. .-.+|++.+.||..
T Consensus 57 pd~Vii~~G~ND~~~~---------~~~----~~~~~~~~~~li~~i~~~~~~~~iv~~~~~~~~ 108 (189)
T cd01825 57 PDLVILSYGTNEAFNK---------QLN----ASEYRQQLREFIKRLRQILPNASILLVGPPDSL 108 (189)
T ss_pred CCEEEEECCCcccccC---------CCC----HHHHHHHHHHHHHHHHHHCCCCeEEEEcCCchh
Confidence 3688899999997421 012 234556667777777663 45567777766643
No 23
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.19 E-value=0.018 Score=47.83 Aligned_cols=80 Identities=8% Similarity=-0.004 Sum_probs=41.2
Q ss_pred cCcEEEEEeCcchhhhhhhcCCccCCCCChHHHHHHHHHHHHHHHHHHhhcCccEEEEeCCCCCCCCCchhhccCCCCCC
Q 024071 165 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESG 244 (273)
Q Consensus 165 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~GAR~~vV~~lpplGc~P~~~~~~~~~~~~ 244 (273)
+-.+++|.+|.||........+ ....+++. +.+...++++ +.++ ++++++++|..-..
T Consensus 69 ~pd~V~i~~G~ND~~~~~~~~~----~~~~~~~~----~~~~~ii~~~-~~~~-~vi~~~~~p~~~~~------------ 126 (193)
T cd01835 69 VPNRLVLSVGLNDTARGGRKRP----QLSARAFL----FGLNQLLEEA-KRLV-PVLVVGPTPVDEAK------------ 126 (193)
T ss_pred CCCEEEEEecCcccccccCccc----ccCHHHHH----HHHHHHHHHH-hcCC-cEEEEeCCCccccc------------
Confidence 4578999999999964311000 11222222 2222222222 2344 47777777654211
Q ss_pred chHHHHHHHHHHHHHHHHHHHHH
Q 024071 245 CVSRINTDAQQFNKKASWRQQEV 267 (273)
Q Consensus 245 c~~~~n~~~~~~N~~L~~~l~~L 267 (273)
....+.....+|+.+++..++.
T Consensus 127 -~~~~~~~~~~~n~~~~~~a~~~ 148 (193)
T cd01835 127 -MPYSNRRIARLETAFAEVCLRR 148 (193)
T ss_pred -cchhhHHHHHHHHHHHHHHHHc
Confidence 0123456677787777766543
No 24
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=96.35 E-value=0.054 Score=44.13 Aligned_cols=46 Identities=13% Similarity=0.200 Sum_probs=27.0
Q ss_pred cEEEEEeCcchhhhhhhcCCccCCCCChHHHHHHHHHHHHHHHHHHhhcCc-cEEEEeC
Q 024071 167 AIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGA-RKFGVTS 224 (273)
Q Consensus 167 sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~GA-R~~vV~~ 224 (273)
.+++|.+|.||..... ..+ ..+...++.+.|+++.+..- .++++..
T Consensus 57 d~vii~~G~ND~~~~~--------~~~----~~~~~~~~~~li~~i~~~~p~~~i~~~~ 103 (169)
T cd01831 57 DLVVINLGTNDFSTGN--------NPP----GEDFTNAYVEFIEELRKRYPDAPIVLML 103 (169)
T ss_pred CEEEEECCcCCCCCCC--------CCC----HHHHHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 4678899999985211 012 23455666677777766543 3455543
No 25
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=95.96 E-value=0.098 Score=42.55 Aligned_cols=77 Identities=17% Similarity=0.147 Sum_probs=48.6
Q ss_pred cCcEEEEEeCcchhhhhhhcCCccCCCCChHHHHHHHHHHHHHHHHHHhhc-CccEEEEeCCCCCCCCCchhhccCCCCC
Q 024071 165 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGL-GARKFGVTSLPPLGCLPAARTLFGYHES 243 (273)
Q Consensus 165 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~-GAR~~vV~~lpplGc~P~~~~~~~~~~~ 243 (273)
.-.+++|++|+||.... .+ .++..+++++.++++.+. ...+++++++||..-.+.
T Consensus 51 ~pd~v~i~~G~ND~~~~----------~~----~~~~~~~~~~l~~~~~~~~p~~~vi~~~~~p~~~~~~---------- 106 (174)
T cd01841 51 NPSKVFLFLGTNDIGKE----------VS----SNQFIKWYRDIIEQIREEFPNTKIYLLSVLPVLEEDE---------- 106 (174)
T ss_pred CCCEEEEEeccccCCCC----------CC----HHHHHHHHHHHHHHHHHHCCCCEEEEEeeCCcCcccc----------
Confidence 44678899999998531 12 234556677777777654 456788888887643222
Q ss_pred CchHHHHHHHHHHHHHHHHHHHH
Q 024071 244 GCVSRINTDAQQFNKKASWRQQE 266 (273)
Q Consensus 244 ~c~~~~n~~~~~~N~~L~~~l~~ 266 (273)
+....+.-...||+.+++..++
T Consensus 107 -~~~~~~~~~~~~n~~l~~~a~~ 128 (174)
T cd01841 107 -IKTRSNTRIQRLNDAIKELAPE 128 (174)
T ss_pred -cccCCHHHHHHHHHHHHHHHHH
Confidence 1122345577888888876554
No 26
>KOG3670 consensus Phospholipase [Lipid transport and metabolism]
Probab=95.81 E-value=0.15 Score=47.10 Aligned_cols=74 Identities=15% Similarity=0.080 Sum_probs=45.8
Q ss_pred ChHHHHHHHHHHHHHHHHHhCchhhhhhhcCc--EEEEEeCcchhhhhhhcCCccCCCCChHHHHHHHHHHHHHHHHHHh
Q 024071 136 SLTQQLQYYREYQSKLAKVAGSKQSASIIKDA--IYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMY 213 (273)
Q Consensus 136 ~l~~Qv~~f~~~~~~~~~~~G~~~~~~~~~~s--L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~ 213 (273)
+|..|-+...+..++.. + -..++. |+.||||+||+-. +-..+. +....+++--..|.++++.|.
T Consensus 161 Dlp~QAr~Lv~rik~~~---~-----i~~~~dWKLi~IfIG~ND~c~-~c~~~~-----~~~~~~~~~~~~i~~Al~~L~ 226 (397)
T KOG3670|consen 161 DLPDQARDLVSRIKKDK---E-----INMKNDWKLITIFIGTNDLCA-YCEGPE-----TPPSPVDQHKRNIRKALEILR 226 (397)
T ss_pred hhHHHHHHHHHHHHhcc---C-----cccccceEEEEEEeccchhhh-hccCCC-----CCCCchhHHHHHHHHHHHHHH
Confidence 56678777665544321 1 122333 8899999999975 322211 222334445567889999999
Q ss_pred hcCccEEEEe
Q 024071 214 GLGARKFGVT 223 (273)
Q Consensus 214 ~~GAR~~vV~ 223 (273)
+.==|.+|++
T Consensus 227 ~nvPR~iV~l 236 (397)
T KOG3670|consen 227 DNVPRTIVSL 236 (397)
T ss_pred hcCCceEEEE
Confidence 8877877554
No 27
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=95.29 E-value=0.14 Score=42.75 Aligned_cols=92 Identities=16% Similarity=0.160 Sum_probs=51.3
Q ss_pred cCcEEEEEeCcchhhhhhhcCCccCCCCChHHHHHHHHHHHHHHHHHHhhcCcc-EEEEeCCC-CCCCCCchhhccCCCC
Q 024071 165 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGAR-KFGVTSLP-PLGCLPAARTLFGYHE 242 (273)
Q Consensus 165 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~GAR-~~vV~~lp-plGc~P~~~~~~~~~~ 242 (273)
.-.+++|.+|+||+..................-......++...|+++-+.+.+ +|+|.+++ |.... .
T Consensus 68 ~~d~V~i~~G~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ir~~~p~~~Ivv~~~~~p~~~~-----~----- 137 (204)
T cd04506 68 KADVITITIGGNDLMQVLEKNFLSLDVEDFKKAEETYQNNLKKIFKEIRKLNPDAPIFLVGLYNPFYVY-----F----- 137 (204)
T ss_pred cCCEEEEEecchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEEEecCCccccc-----c-----
Confidence 456889999999997543211000000111223445666777777777765433 56666652 32111 0
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHH
Q 024071 243 SGCVSRINTDAQQFNKKASWRQQEV 267 (273)
Q Consensus 243 ~~c~~~~n~~~~~~N~~L~~~l~~L 267 (273)
.-....++.+..||+.+++..++.
T Consensus 138 -~~~~~~~~~~~~~n~~~~~~a~~~ 161 (204)
T cd04506 138 -PNITEINDIVNDWNEASQKLASQY 161 (204)
T ss_pred -chHHHHHHHHHHHHHHHHHHHHhC
Confidence 012346788889998888776543
No 28
>COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism]
Probab=95.05 E-value=0.27 Score=41.43 Aligned_cols=14 Identities=21% Similarity=0.261 Sum_probs=12.6
Q ss_pred CcEEEEEeCcchhh
Q 024071 166 DAIYIVGSGSGDFL 179 (273)
Q Consensus 166 ~sL~~i~iG~ND~~ 179 (273)
-++++|.+|+||..
T Consensus 78 ~d~v~i~lG~ND~~ 91 (216)
T COG2755 78 PDLVIIMLGGNDIG 91 (216)
T ss_pred CCEEEEEeeccccc
Confidence 68899999999985
No 29
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=94.86 E-value=0.22 Score=40.66 Aligned_cols=83 Identities=8% Similarity=-0.008 Sum_probs=49.0
Q ss_pred CcEEEEEeCcchhhhhhhcCCccCCCCChHHHHHHHHHHHHHHHHHHh-hcCccEEEEeCCCCCCCCCchhhccCCCCCC
Q 024071 166 DAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMY-GLGARKFGVTSLPPLGCLPAARTLFGYHESG 244 (273)
Q Consensus 166 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~-~~GAR~~vV~~lpplGc~P~~~~~~~~~~~~ 244 (273)
-.+++|++|.||....+.. ... .++..+++.+.|+.+. .....+|++.+.+|....+.. ..
T Consensus 62 ~d~v~l~~G~ND~~~~~~~------~~~----~~~~~~~l~~~v~~~~~~~~~~~ii~~~p~~~~~~~~~--------~~ 123 (191)
T cd01834 62 PDVVSIMFGINDSFRGFDD------PVG----LEKFKTNLRRLIDRLKNKESAPRIVLVSPIAYEANEDP--------LP 123 (191)
T ss_pred CCEEEEEeecchHhhcccc------ccc----HHHHHHHHHHHHHHHHcccCCCcEEEECCcccCCCCCC--------CC
Confidence 4689999999999753210 112 2345566777777774 334456777665554332110 00
Q ss_pred chHHHHHHHHHHHHHHHHHHHH
Q 024071 245 CVSRINTDAQQFNKKASWRQQE 266 (273)
Q Consensus 245 c~~~~n~~~~~~N~~L~~~l~~ 266 (273)
-....+.....||+.+++..++
T Consensus 124 ~~~~~~~~~~~~n~~l~~~a~~ 145 (191)
T cd01834 124 DGAEYNANLAAYADAVRELAAE 145 (191)
T ss_pred ChHHHHHHHHHHHHHHHHHHHH
Confidence 1345677788888888776554
No 30
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=94.79 E-value=0.19 Score=39.71 Aligned_cols=78 Identities=12% Similarity=0.081 Sum_probs=47.3
Q ss_pred hcCcEEEEEeCcchhhhhhhcCCccCCCCChHHHHHHHHHHHHHHHHHHhh-cCccEEEEeCCCCCCCCCchhhccCCCC
Q 024071 164 IKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYG-LGARKFGVTSLPPLGCLPAARTLFGYHE 242 (273)
Q Consensus 164 ~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~-~GAR~~vV~~lpplGc~P~~~~~~~~~~ 242 (273)
.+-.++++.+|+||+.... . .. .....+.+.+.++.+.+ ....+|++.+.||.++.|.
T Consensus 64 ~~~d~vil~~G~ND~~~~~-~-------~~----~~~~~~~~~~~i~~~~~~~~~~~vv~~~~~~~~~~~~--------- 122 (187)
T cd00229 64 DKPDLVIIELGTNDLGRGG-D-------TS----IDEFKANLEELLDALRERAPGAKVILITPPPPPPREG--------- 122 (187)
T ss_pred CCCCEEEEEeccccccccc-c-------cC----HHHHHHHHHHHHHHHHHHCCCCcEEEEeCCCCCCCch---------
Confidence 4777899999999996421 0 01 12334455555555554 5667888888888887765
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHH
Q 024071 243 SGCVSRINTDAQQFNKKASWRQQEV 267 (273)
Q Consensus 243 ~~c~~~~n~~~~~~N~~L~~~l~~L 267 (273)
..+.....+|+.+++..++.
T Consensus 123 -----~~~~~~~~~~~~~~~~~~~~ 142 (187)
T cd00229 123 -----LLGRALPRYNEAIKAVAAEN 142 (187)
T ss_pred -----hhHHHHHHHHHHHHHHHHHc
Confidence 12234556666665555443
No 31
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=94.65 E-value=0.29 Score=40.64 Aligned_cols=82 Identities=10% Similarity=0.079 Sum_probs=47.5
Q ss_pred CcEEEEEeCcchhhhhhhcCCccCCCCChHHHHHHHHHHHHHHHHHHhhcCccEEEEeCCCCCCCCCchhhccCCCCCCc
Q 024071 166 DAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGC 245 (273)
Q Consensus 166 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~GAR~~vV~~lpplGc~P~~~~~~~~~~~~c 245 (273)
=++++|.+|+||......... . .......+.+...+++...++++-+.|++ +++++.||+.-
T Consensus 60 pd~vii~~G~ND~~~~~~~~~-~-~~~~~~~~~~~~~~~l~~lv~~~~~~~~~-vili~~pp~~~--------------- 121 (200)
T cd01829 60 PDVVVVFLGANDRQDIRDGDG-Y-LKFGSPEWEEEYRQRIDELLNVARAKGVP-VIWVGLPAMRS--------------- 121 (200)
T ss_pred CCEEEEEecCCCCccccCCCc-e-eecCChhHHHHHHHHHHHHHHHHHhCCCc-EEEEcCCCCCC---------------
Confidence 367888899999863221110 0 00112345556667777777777766776 67777777541
Q ss_pred hHHHHHHHHHHHHHHHHHHHH
Q 024071 246 VSRINTDAQQFNKKASWRQQE 266 (273)
Q Consensus 246 ~~~~n~~~~~~N~~L~~~l~~ 266 (273)
...+.....+|..+++..++
T Consensus 122 -~~~~~~~~~~~~~~~~~a~~ 141 (200)
T cd01829 122 -PKLSADMVYLNSLYREEVAK 141 (200)
T ss_pred -hhHhHHHHHHHHHHHHHHHH
Confidence 11234456677777666554
No 32
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=94.55 E-value=0.86 Score=37.94 Aligned_cols=113 Identities=15% Similarity=0.199 Sum_probs=62.5
Q ss_pred CccHHHHHHHhcCCCCCCCCCCCCCcCCCCCcCCcceeccCccccCCCCCcccccChHHHHHHHHHHHHHHHHHhCchhh
Q 024071 81 GKLATDFTADTLGFKTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQS 160 (273)
Q Consensus 81 G~~~~d~la~~lgl~~~~ppyl~~~~~~~~~~~G~NfA~gGA~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~G~~~~ 160 (273)
|..|+-.++..+|++ . +|.+++|.+- ++..+-.+..
T Consensus 21 g~~~~~~~aR~l~~~-~-----------------iNLGfsG~~~------------le~~~a~~ia-------------- 56 (178)
T PF14606_consen 21 GMAYPAILARRLGLD-V-----------------INLGFSGNGK------------LEPEVADLIA-------------- 56 (178)
T ss_dssp GGSHHHHHHHHHT-E-E-----------------EEEE-TCCCS--------------HHHHHHHH--------------
T ss_pred cccHHHHHHHHcCCC-e-----------------EeeeecCccc------------cCHHHHHHHh--------------
Confidence 578999999999987 2 7999999773 2334433322
Q ss_pred hhhhcCcEEEEEeCcchhhhhhhcCCccCCCCChHHHHHHHHHHHHHHHHHHhhc-CccEEEEeCCCCCCCCCchhhccC
Q 024071 161 ASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGL-GARKFGVTSLPPLGCLPAARTLFG 239 (273)
Q Consensus 161 ~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~-GAR~~vV~~lpplGc~P~~~~~~~ 239 (273)
. .+.++|++..|.| + . . . .+...+...|++|-+. --.-|++..-.+ +...
T Consensus 57 -~-~~a~~~~ld~~~N-----~-~-~-----~-------~~~~~~~~fv~~iR~~hP~tPIllv~~~~--~~~~------ 107 (178)
T PF14606_consen 57 -E-IDADLIVLDCGPN-----M-S-P-----E-------EFRERLDGFVKTIREAHPDTPILLVSPIP--YPAG------ 107 (178)
T ss_dssp -H-S--SEEEEEESHH-----C-C-T-----T-------THHHHHHHHHHHHHTT-SSS-EEEEE------TTT------
T ss_pred -c-CCCCEEEEEeecC-----C-C-H-----H-------HHHHHHHHHHHHHHHhCCCCCEEEEecCC--cccc------
Confidence 1 2458999999999 1 1 1 1 2334455555666544 245566644221 1111
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHHHHh
Q 024071 240 YHESGCVSRINTDAQQFNKKASWRQQEVAVE 270 (273)
Q Consensus 240 ~~~~~c~~~~n~~~~~~N~~L~~~l~~L~~~ 270 (273)
........-.+.+|+.+++.+++|+++
T Consensus 108 ----~~~~~~~~~~~~~~~~~r~~v~~l~~~ 134 (178)
T PF14606_consen 108 ----YFDNSRGETVEEFREALREAVEQLRKE 134 (178)
T ss_dssp ----TS--TTS--HHHHHHHHHHHHHHHHHT
T ss_pred ----ccCchHHHHHHHHHHHHHHHHHHHHHc
Confidence 122223345788999999999999753
No 33
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=94.08 E-value=0.24 Score=40.09 Aligned_cols=73 Identities=18% Similarity=0.245 Sum_probs=45.1
Q ss_pred cCcEEEEEeCcchhhhhhhcCCccCCCCChHHHHHHHHHHHHHHHHHHhh--cCccEEEEeCCCCCCCCCchhhccCCCC
Q 024071 165 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYG--LGARKFGVTSLPPLGCLPAARTLFGYHE 242 (273)
Q Consensus 165 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~--~GAR~~vV~~lpplGc~P~~~~~~~~~~ 242 (273)
.-.++++.+|.||.... .++ ++..+++.+.|+++.+ .++ +|++.++||.+ +.
T Consensus 48 ~pd~vvl~~G~ND~~~~----------~~~----~~~~~~l~~li~~~~~~~~~~-~vi~~~~~p~~--~~--------- 101 (169)
T cd01828 48 QPKAIFIMIGINDLAQG----------TSD----EDIVANYRTILEKLRKHFPNI-KIVVQSILPVG--EL--------- 101 (169)
T ss_pred CCCEEEEEeeccCCCCC----------CCH----HHHHHHHHHHHHHHHHHCCCC-eEEEEecCCcC--cc---------
Confidence 34789999999998521 122 3444556666666665 454 57888888765 10
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHH
Q 024071 243 SGCVSRINTDAQQFNKKASWRQQE 266 (273)
Q Consensus 243 ~~c~~~~n~~~~~~N~~L~~~l~~ 266 (273)
....+.....+|+.+++..++
T Consensus 102 ---~~~~~~~~~~~n~~l~~~a~~ 122 (169)
T cd01828 102 ---KSIPNEQIEELNRQLAQLAQQ 122 (169)
T ss_pred ---CcCCHHHHHHHHHHHHHHHHH
Confidence 012234567888888776553
No 34
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=93.65 E-value=0.58 Score=37.20 Aligned_cols=74 Identities=18% Similarity=0.225 Sum_probs=47.2
Q ss_pred cCcEEEEEeCcchhhhhhhcCCccCCCCChHHHHHHHHHHHHHHHHHHhhcCc-cEEEEeCCCCCCCCCchhhccCCCCC
Q 024071 165 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGA-RKFGVTSLPPLGCLPAARTLFGYHES 243 (273)
Q Consensus 165 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~GA-R~~vV~~lpplGc~P~~~~~~~~~~~ 243 (273)
+-++++|.+|+||.... .+. +...+++++.|+++.+..- -++++.+++|..-.+
T Consensus 40 ~pd~vvi~~G~ND~~~~----------~~~----~~~~~~~~~~i~~i~~~~p~~~ii~~~~~p~~~~~----------- 94 (157)
T cd01833 40 KPDVVLLHLGTNDLVLN----------RDP----DTAPDRLRALIDQMRAANPDVKIIVATLIPTTDAS----------- 94 (157)
T ss_pred CCCEEEEeccCcccccC----------CCH----HHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCCcc-----------
Confidence 45788999999998642 122 3455666666777766532 235556655532211
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHH
Q 024071 244 GCVSRINTDAQQFNKKASWRQQEVA 268 (273)
Q Consensus 244 ~c~~~~n~~~~~~N~~L~~~l~~L~ 268 (273)
.+.....||+.+++.+++.+
T Consensus 95 -----~~~~~~~~n~~l~~~~~~~~ 114 (157)
T cd01833 95 -----GNARIAEYNAAIPGVVADLR 114 (157)
T ss_pred -----hhHHHHHHHHHHHHHHHHHh
Confidence 15668899999999888765
No 35
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=92.33 E-value=1.8 Score=34.97 Aligned_cols=49 Identities=12% Similarity=0.240 Sum_probs=31.2
Q ss_pred cCcEEEEEeCcchhhhhhhcCCccCCCCChHHHHHHHHHHHHHHHHHHhhcCc-cEEEEeCCCC
Q 024071 165 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGA-RKFGVTSLPP 227 (273)
Q Consensus 165 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~GA-R~~vV~~lpp 227 (273)
.-.+++|.+|.||+... .+ .+...+++.+.++++.+.+. .++++..+||
T Consensus 50 ~p~~vvi~~G~ND~~~~----------~~----~~~~~~~~~~lv~~i~~~~~~~~iil~~~~p 99 (171)
T cd04502 50 QPRRVVLYAGDNDLASG----------RT----PEEVLRDFRELVNRIRAKLPDTPIAIISIKP 99 (171)
T ss_pred CCCEEEEEEecCcccCC----------CC----HHHHHHHHHHHHHHHHHHCCCCcEEEEEecC
Confidence 34588999999997421 12 34456677777777776643 3566666554
No 36
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=91.95 E-value=0.81 Score=38.72 Aligned_cols=72 Identities=14% Similarity=0.158 Sum_probs=43.9
Q ss_pred cCcEEEEEeCcchhhhhhhcCCccCCCCChHHHHHHHHHHHHHHHHHHhhcC-ccEEEEeCCCCCCCCCchhhccCCCCC
Q 024071 165 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLG-ARKFGVTSLPPLGCLPAARTLFGYHES 243 (273)
Q Consensus 165 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~G-AR~~vV~~lpplGc~P~~~~~~~~~~~ 243 (273)
.-.+++|++|+||+.... + .+++.+++...|+++.+.. -.+|++.+++|.+..|
T Consensus 89 ~pd~VvI~~G~ND~~~~~----------~----~~~~~~~l~~ii~~l~~~~P~~~Iil~~~~p~~~~~----------- 143 (214)
T cd01820 89 NPKVVVLLIGTNNIGHTT----------T----AEEIAEGILAIVEEIREKLPNAKILLLGLLPRGQNP----------- 143 (214)
T ss_pred CCCEEEEEecccccCCCC----------C----HHHHHHHHHHHHHHHHHHCCCCeEEEEeccCCCCCc-----------
Confidence 347889999999985311 2 2344566667777776552 3468888887765421
Q ss_pred CchHHHHHHHHHHHHHHHHHH
Q 024071 244 GCVSRINTDAQQFNKKASWRQ 264 (273)
Q Consensus 244 ~c~~~~n~~~~~~N~~L~~~l 264 (273)
..+++....+|+.+++..
T Consensus 144 ---~~~~~~~~~~n~~l~~~~ 161 (214)
T cd01820 144 ---NPLRERNAQVNRLLAVRY 161 (214)
T ss_pred ---hhHHHHHHHHHHHHHHHh
Confidence 122344567777776554
No 37
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family. Acyloxyacyl-hydrolase is a leukocyte-secreted enzyme that deacetylates bacterial lipopolysaccharides.
Probab=87.73 E-value=3.5 Score=37.24 Aligned_cols=55 Identities=11% Similarity=-0.098 Sum_probs=35.8
Q ss_pred cEEEEEeCcchhhhhhhcCCccCCCCChHHHHHHHHHHHHHHHHHHhhcCcc--EEEEeCCCCC
Q 024071 167 AIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGAR--KFGVTSLPPL 228 (273)
Q Consensus 167 sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~GAR--~~vV~~lppl 228 (273)
.+++|++|+||..... . . .....+ +++--+++.+.++.|.+..-+ +|++.++|++
T Consensus 124 ~lVtI~lGgND~C~g~-~-d-~~~~tp----~eefr~NL~~~L~~Lr~~lP~~s~ViLvgmpd~ 180 (305)
T cd01826 124 ALVIYSMIGNDVCNGP-N-D-TINHTT----PEEFYENVMEALKYLDTKLPNGSHVILVGLVDG 180 (305)
T ss_pred eEEEEEeccchhhcCC-C-c-cccCcC----HHHHHHHHHHHHHHHHhcCCCCCEEEEEeccch
Confidence 7788889999996421 1 1 111123 344456777788888887654 8888888873
No 38
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism]
Probab=73.73 E-value=23 Score=30.53 Aligned_cols=93 Identities=16% Similarity=0.185 Sum_probs=56.7
Q ss_pred cCcEEEEEeCcchhhhhhhcCCcc-CCCCChHHHHHHHHHHHHHHHHHHhhcC-ccEEEEeCCCCCCCCCchhhccCCCC
Q 024071 165 KDAIYIVGSGSGDFLQNYYVNPLL-NKVYTPEQYSSMLVNIFSSFIKNMYGLG-ARKFGVTSLPPLGCLPAARTLFGYHE 242 (273)
Q Consensus 165 ~~sL~~i~iG~ND~~~~~~~~~~~-~~~~~~~~~v~~vv~~i~~~i~~L~~~G-AR~~vV~~lpplGc~P~~~~~~~~~~ 242 (273)
.-.+.+|..|+||-.. ..+.. ..-....+| ++++++.++-|-..- -.+|++++=||+...-......
T Consensus 68 ~p~lvtVffGaNDs~l---~~~~~~~~hvPl~Ey----~dNlr~iv~~lks~~~~~riIlitPpp~de~~~~~~~~---- 136 (245)
T KOG3035|consen 68 QPVLVTVFFGANDSCL---PEPSSLGQHVPLEEY----KDNLRKIVSHLKSLSPETRIILITPPPVDEEAWEKQEQ---- 136 (245)
T ss_pred CceEEEEEecCccccC---CCCCCCCCccCHHHH----HHHHHHHHHHhhccCCcceEEEecCCCcCHHHHHHHhc----
Confidence 4478899999999753 11111 001233444 456666666665553 3567777767766543333221
Q ss_pred CCchH---HHHHHHHHHHHHHHHHHHHHH
Q 024071 243 SGCVS---RINTDAQQFNKKASWRQQEVA 268 (273)
Q Consensus 243 ~~c~~---~~n~~~~~~N~~L~~~l~~L~ 268 (273)
..|.. ..|+.+..|++.+.+..++++
T Consensus 137 e~~~~~~~RtNe~~~~Ya~ac~~la~e~~ 165 (245)
T KOG3035|consen 137 EPYVLGPERTNETVGTYAKACANLAQEIG 165 (245)
T ss_pred cchhccchhhhhHHHHHHHHHHHHHHHhC
Confidence 23433 489999999999988887765
No 39
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=66.64 E-value=44 Score=30.53 Aligned_cols=84 Identities=17% Similarity=0.177 Sum_probs=49.7
Q ss_pred cCcEEEEEeCcchhhhhhhcCCccCCCCChHHHHHHHHHHHHHHHHHHhhcCc---cEEEEeCCCCCCCCCchhhccCCC
Q 024071 165 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGA---RKFGVTSLPPLGCLPAARTLFGYH 241 (273)
Q Consensus 165 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~GA---R~~vV~~lpplGc~P~~~~~~~~~ 241 (273)
+=+..+|.+|.||.-... .+.......+ +.=...+.+.+.++.+.-. =+++.+++|+.-.
T Consensus 177 ~~a~vVV~lGaND~q~~~-~gd~~~kf~S-----~~W~~eY~kRvd~~l~ia~~~~~~V~WvGmP~~r~----------- 239 (354)
T COG2845 177 KPAAVVVMLGANDRQDFK-VGDVYEKFRS-----DEWTKEYEKRVDAILKIAHTHKVPVLWVGMPPFRK----------- 239 (354)
T ss_pred CccEEEEEecCCCHHhcc-cCCeeeecCc-----hHHHHHHHHHHHHHHHHhcccCCcEEEeeCCCccc-----------
Confidence 445667789999996533 2221110111 1223445555555554433 3667778776432
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHh
Q 024071 242 ESGCVSRINTDAQQFNKKASWRQQEVAVE 270 (273)
Q Consensus 242 ~~~c~~~~n~~~~~~N~~L~~~l~~L~~~ 270 (273)
+.+|+-...+|...++.++.+..+
T Consensus 240 -----~~l~~dm~~ln~iy~~~vE~~~gk 263 (354)
T COG2845 240 -----KKLNADMVYLNKIYSKAVEKLGGK 263 (354)
T ss_pred -----cccchHHHHHHHHHHHHHHHhCCe
Confidence 356677789999999998888654
No 40
>PLN02757 sirohydrochlorine ferrochelatase
Probab=64.98 E-value=15 Score=29.74 Aligned_cols=18 Identities=17% Similarity=0.106 Sum_probs=14.7
Q ss_pred HHHHHHHHhhcCccEEEE
Q 024071 205 FSSFIKNMYGLGARKFGV 222 (273)
Q Consensus 205 i~~~i~~L~~~GAR~~vV 222 (273)
+.+.|++|.+.|+|+|+|
T Consensus 60 l~eal~~l~~~g~~~vvV 77 (154)
T PLN02757 60 IKDAFGRCVEQGASRVIV 77 (154)
T ss_pred HHHHHHHHHHCCCCEEEE
Confidence 455668888899999988
No 41
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=61.16 E-value=36 Score=26.78 Aligned_cols=14 Identities=14% Similarity=0.264 Sum_probs=11.7
Q ss_pred cCcEEEEEeCcchh
Q 024071 165 KDAIYIVGSGSGDF 178 (273)
Q Consensus 165 ~~sL~~i~iG~ND~ 178 (273)
...+++|.+|+||.
T Consensus 50 ~~d~vvi~lGtNd~ 63 (150)
T cd01840 50 LRKTVVIGLGTNGP 63 (150)
T ss_pred CCCeEEEEecCCCC
Confidence 34678999999997
No 42
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=57.62 E-value=4.7 Score=37.24 Aligned_cols=70 Identities=14% Similarity=0.130 Sum_probs=50.9
Q ss_pred hcCcEEEEEeCcchhhhhhhcCCccCCCCChHHHHHHHHHHHHHHHHHHhhcCccEEEEeCCCCCCCCCchhhc
Q 024071 164 IKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTL 237 (273)
Q Consensus 164 ~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~GAR~~vV~~lpplGc~P~~~~~ 237 (273)
..+.++..|+|+||+...-.... .......+......+.+++..++..+.-+||..+.|.++-.|..+..
T Consensus 97 ~~~~~~~~~a~gnd~A~gga~~~----~~~~~~~i~~~~~~~~~Qv~~~l~a~~~~~v~~~~~~~~l~p~~l~~ 166 (370)
T COG3240 97 DPNGLYIHWAGGNDLAVGGARST----EPNTGNSIGASATSLAQQVGAFLAAGQGGFVWPNYPAQGLDPSALYF 166 (370)
T ss_pred CcccccCcccccccHhhhccccc----cccccccccccccchHHHHHHHHHhcCCccccccccccccCHHHHHH
Confidence 46778899999999976432211 00111233445566778888999999999999999999999998764
No 43
>PRK13384 delta-aminolevulinic acid dehydratase; Provisional
Probab=54.12 E-value=26 Score=31.77 Aligned_cols=56 Identities=13% Similarity=0.073 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHhhcCccEEEEeCCCCCCCCCchhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 024071 201 LVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKASWRQQEVAVEQEL 273 (273)
Q Consensus 201 vv~~i~~~i~~L~~~GAR~~vV~~lpplGc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~L~~~~p~ 273 (273)
-++.+.+.++++.++|.+.|+++++|+. . ...+ .+..|. |..+++.+..+++++|+
T Consensus 59 sid~l~~~~~~~~~~Gi~~v~lFgv~~~-K-----d~~g------s~A~~~-----~g~v~~air~iK~~~pd 114 (322)
T PRK13384 59 PESALADEIERLYALGIRYVMPFGISHH-K-----DAKG------SDTWDD-----NGLLARMVRTIKAAVPE 114 (322)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCCC-C-----CCCc------ccccCC-----CChHHHHHHHHHHHCCC
Confidence 4577788889999999999999998542 2 2111 111111 45566777778888775
No 44
>PRK09283 delta-aminolevulinic acid dehydratase; Validated
Probab=53.73 E-value=22 Score=32.34 Aligned_cols=56 Identities=9% Similarity=0.087 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHhhcCccEEEEeCCCCCCCCCchhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 024071 201 LVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKASWRQQEVAVEQEL 273 (273)
Q Consensus 201 vv~~i~~~i~~L~~~GAR~~vV~~lpplGc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~L~~~~p~ 273 (273)
-++.+.+.++++.++|.+.|+++++|. .+...+ .+..|. |..+.+.+..+++++|+
T Consensus 57 s~d~l~~~v~~~~~~Gi~av~LFgv~~------~Kd~~g------s~A~~~-----~g~v~rair~iK~~~p~ 112 (323)
T PRK09283 57 SIDLLVKEAEEAVELGIPAVALFGVPE------LKDEDG------SEAYNP-----DGLVQRAIRAIKKAFPE 112 (323)
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCcCC------CCCccc------ccccCC-----CCHHHHHHHHHHHhCCC
Confidence 457777888999999999999999832 222221 111111 34456677777777764
No 45
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=53.20 E-value=12 Score=27.71 Aligned_cols=10 Identities=30% Similarity=0.454 Sum_probs=5.8
Q ss_pred ccchhhHHHHH
Q 024071 5 MCCGKTVLFVV 15 (273)
Q Consensus 5 ~~~~~~~~~~~ 15 (273)
|+ ||+++++.
T Consensus 1 Ma-SK~~llL~ 10 (95)
T PF07172_consen 1 MA-SKAFLLLG 10 (95)
T ss_pred Cc-hhHHHHHH
Confidence 77 66555443
No 46
>cd00384 ALAD_PBGS Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. They either contain a cysteine-rich zinc binding site (consensus DXCXCX(Y/F)X3G(H/Q)CG) or an aspartate-rich magnesium binding site (consensus DXALDX(Y/F)X3G(H/Q)DG). The cyste
Probab=50.45 E-value=60 Score=29.45 Aligned_cols=56 Identities=11% Similarity=0.073 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHhhcCccEEEEeCCCCCCCCCchhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 024071 201 LVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKASWRQQEVAVEQEL 273 (273)
Q Consensus 201 vv~~i~~~i~~L~~~GAR~~vV~~lpplGc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~L~~~~p~ 273 (273)
-++.+.+.++++.++|.+.|+++++|.. .-+ .+ .+..|. |..+++.+..+++++|+
T Consensus 49 s~d~l~~~~~~~~~~Gi~~v~LFgv~~~-Kd~-----~g------s~A~~~-----~g~v~~air~iK~~~p~ 104 (314)
T cd00384 49 SVDSLVEEAEELADLGIRAVILFGIPEH-KDE-----IG------SEAYDP-----DGIVQRAIRAIKEAVPE 104 (314)
T ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCCC-CCC-----Cc------ccccCC-----CChHHHHHHHHHHhCCC
Confidence 4577888899999999999999998642 221 11 111111 34456677777777764
No 47
>PRK06520 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Provisional
Probab=47.41 E-value=63 Score=30.00 Aligned_cols=31 Identities=23% Similarity=0.403 Sum_probs=27.5
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhcCccEEEEe
Q 024071 193 TPEQYSSMLVNIFSSFIKNMYGLGARKFGVT 223 (273)
Q Consensus 193 ~~~~~v~~vv~~i~~~i~~L~~~GAR~~vV~ 223 (273)
+.++++.+++..+.+.++.|+++|+|.|-+=
T Consensus 160 ~~~~~~~dlA~al~~Ei~~L~~aG~~~IQiD 190 (368)
T PRK06520 160 DLDDYFDDLAKTWRDAIKAFYDAGCRYLQLD 190 (368)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCEEEec
Confidence 4578999999999999999999999997663
No 48
>cd04823 ALAD_PBGS_aspartate_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. All of PBGS_aspartate_rich contain an aspartate rich metal binding site with the general sequence DXALDX(Y/F)X3G(H/Q)DG. They also contain an allosteric magnesiu
Probab=46.19 E-value=39 Score=30.69 Aligned_cols=26 Identities=8% Similarity=0.094 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHhhcCccEEEEeCCC
Q 024071 201 LVNIFSSFIKNMYGLGARKFGVTSLP 226 (273)
Q Consensus 201 vv~~i~~~i~~L~~~GAR~~vV~~lp 226 (273)
-++.+.+.++++.++|.+.|++++++
T Consensus 52 s~d~l~~~v~~~~~~Gi~~v~lFgv~ 77 (320)
T cd04823 52 SIDELLKEAEEAVDLGIPAVALFPVT 77 (320)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCC
Confidence 46778888999999999999999984
No 49
>PF08029 HisG_C: HisG, C-terminal domain; InterPro: IPR013115 ATP phosphoribosyltransferase (2.4.2.17 from EC) is the enzyme that catalyzes the first step in the biosynthesis of histidine in bacteria, fungi and plants as shown below. It is a member of the larger phosphoribosyltransferase superfamily of enzymes which catalyse the condensation of 5-phospho-alpha-D-ribose 1-diphosphate with nitrogenous bases in the presence of divalent metal ions []. ATP + 5-phospho-alpha-D-ribose 1-diphosphate = 1-(5-phospho-D-ribosyl)-ATP + diphosphate Histidine biosynthesis is an energetically expensive process and ATP phosphoribosyltransferase activity is subject to control at several levels. Transcriptional regulation is based primarily on nutrient conditions and determines the amount of enzyme present in the cell, while feedback inihibition rapidly modulates activity in response to cellular conditions. The enzyme has been shown to be inhibited by 1-(5-phospho-D-ribosyl)-ATP, histidine, ppGpp (a signal associated with adverse environmental conditions) and ADP and AMP (which reflect the overall energy status of the cell). As this pathway of histidine biosynthesis is present only in prokayrotes, plants and fungi, this enzyme is a promising target for the development of novel antimicrobial compounds and herbicides. This entry represents the C-terminal portion of ATP phosphoribosyltransferase. The enzyme itself exists in equilibrium between an active dimeric form, an inactive hexameric form and higher aggregates [, ]. Interconversion between the various forms is largely reversible and is influenced by the binding of the natural substrates and inhibitors of the enzyme. This domain is not directly involved in catalysis but appears to be responsible for the formation of hexamers induced by the binding of inhibitors to the enzyme, thus regulating activity.; GO: 0000287 magnesium ion binding, 0003879 ATP phosphoribosyltransferase activity, 0000105 histidine biosynthetic process, 0005737 cytoplasm; PDB: 1Q1K_A 1H3D_A 2VD3_B 1NH7_A 1NH8_A.
Probab=44.99 E-value=21 Score=25.23 Aligned_cols=21 Identities=14% Similarity=0.229 Sum_probs=15.6
Q ss_pred HHHHHHHHhhcCccEEEEeCC
Q 024071 205 FSSFIKNMYGLGARKFGVTSL 225 (273)
Q Consensus 205 i~~~i~~L~~~GAR~~vV~~l 225 (273)
+.+.+.+|.++||+-|+|..+
T Consensus 52 ~~~~~~~Lk~~GA~~Ilv~pi 72 (75)
T PF08029_consen 52 VWDLMDKLKAAGASDILVLPI 72 (75)
T ss_dssp HHHHHHHHHCTT-EEEEEEE-
T ss_pred HHHHHHHHHHcCCCEEEEEec
Confidence 445578999999999999764
No 50
>COG0113 HemB Delta-aminolevulinic acid dehydratase [Coenzyme metabolism]
Probab=44.73 E-value=36 Score=30.80 Aligned_cols=27 Identities=11% Similarity=0.159 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHhhcCccEEEEeCCCC
Q 024071 201 LVNIFSSFIKNMYGLGARKFGVTSLPP 227 (273)
Q Consensus 201 vv~~i~~~i~~L~~~GAR~~vV~~lpp 227 (273)
-++.+.+.++++.++|.+-|+++++|+
T Consensus 59 s~d~l~~~~~~~~~lGi~av~LFgvp~ 85 (330)
T COG0113 59 SLDRLVEEAEELVDLGIPAVILFGVPD 85 (330)
T ss_pred cHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 467788888999999999999999886
No 51
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.
Probab=43.93 E-value=41 Score=24.52 Aligned_cols=25 Identities=16% Similarity=0.248 Sum_probs=18.2
Q ss_pred HHHHHHHHhhcCccEEEEeCCCCCCCCCchhhc
Q 024071 205 FSSFIKNMYGLGARKFGVTSLPPLGCLPAARTL 237 (273)
Q Consensus 205 i~~~i~~L~~~GAR~~vV~~lpplGc~P~~~~~ 237 (273)
+.+.+++|.+.|+++++| .|.++..
T Consensus 46 ~~~~l~~l~~~g~~~v~v--------vPlfl~~ 70 (101)
T cd03416 46 LAEALDELAAQGATRIVV--------VPLFLLA 70 (101)
T ss_pred HHHHHHHHHHcCCCEEEE--------EeeEeCC
Confidence 334577888899999998 5666543
No 52
>PF00490 ALAD: Delta-aminolevulinic acid dehydratase; InterPro: IPR001731 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway []. The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin []. The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) []. This entry represents porphobilinogen (PBG) synthase (PBGS, or 5-aminoaevulinic acid dehydratase, or ALAD, 4.2.1.24 from EC), which functions during the second stage of tetrapyrrole biosynthesis. This enzyme catalyses a Knorr-type condensation reaction between two molecules of ALA to generate porphobilinogen, the pyrrolic building block used in later steps []. The structure of the enzyme is based on a TIM barrel topology made up of eight identical subunits, where each subunit binds to a metal ion that is essential for activity, usually zinc (in yeast, mammals and certain bacteria) or magnesium (in plants and other bacteria). A lysine has been implicated in the catalytic mechanism []. The lack of PBGS enzyme causes a rare porphyric disorder known as ALAD porphyria, which appears to involve conformational changes in the enzyme [.; GO: 0004655 porphobilinogen synthase activity, 0046872 metal ion binding, 0033014 tetrapyrrole biosynthetic process; PDB: 2C1H_A 1W1Z_A 1GZG_B 1W5O_B 1W5Q_B 2C18_A 1B4K_A 2C19_B 1W56_B 2C13_B ....
Probab=41.05 E-value=74 Score=29.02 Aligned_cols=24 Identities=13% Similarity=0.220 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHhhcCccEEEEeCC
Q 024071 202 VNIFSSFIKNMYGLGARKFGVTSL 225 (273)
Q Consensus 202 v~~i~~~i~~L~~~GAR~~vV~~l 225 (273)
++.+.+.++++.++|.+.|+++++
T Consensus 56 id~l~~~v~~~~~~GI~~v~lFgv 79 (324)
T PF00490_consen 56 IDSLVKEVEEAVDLGIRAVILFGV 79 (324)
T ss_dssp HHHHHHHHHHHHHTT--EEEEEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEEEee
Confidence 577778889999999999999887
No 53
>PRK13717 conjugal transfer protein TrbI; Provisional
Probab=40.17 E-value=49 Score=25.89 Aligned_cols=26 Identities=12% Similarity=0.049 Sum_probs=23.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhC
Q 024071 246 VSRINTDAQQFNKKASWRQQEVAVEQ 271 (273)
Q Consensus 246 ~~~~n~~~~~~N~~L~~~l~~L~~~~ 271 (273)
.++.+.++..||+.|.+.|++..+++
T Consensus 70 e~q~e~lt~rF~~aL~~~L~~yq~~H 95 (128)
T PRK13717 70 EAQSKALSARFNTALEASLQAWQQKH 95 (128)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 56788999999999999999998775
No 54
>PRK09121 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Provisional
Probab=39.94 E-value=1e+02 Score=28.19 Aligned_cols=30 Identities=13% Similarity=0.165 Sum_probs=27.1
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhcCccEEEE
Q 024071 193 TPEQYSSMLVNIFSSFIKNMYGLGARKFGV 222 (273)
Q Consensus 193 ~~~~~v~~vv~~i~~~i~~L~~~GAR~~vV 222 (273)
+.++++..++..+.+.++.|+++|+|.|-+
T Consensus 146 ~~~el~~dlA~al~~Ei~~L~~aG~~~IQi 175 (339)
T PRK09121 146 SREKLAWEFAKILNQEAKELEAAGVDIIQF 175 (339)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCEEEe
Confidence 457899999999999999999999999866
No 55
>PF01903 CbiX: CbiX; InterPro: IPR002762 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents the CbiX protein, which functions as a cobalt-chelatase in the anaerobic biosynthesis of cobalamin. It catalyses the insertion of cobalt into sirohydrochlorin. The structure of CbiX from Archaeoglobus fulgidus consists of a central mixed beta-sheet flanked by four alpha-helices, although it is about half the size of other Class II tetrapyrrole chelatases []. The CbiX proteins found in archaea appear to be shorter than those found in eubacteria [].; GO: 0016829 lyase activity, 0046872 metal ion binding, 0009236 cobalamin biosynthetic process; PDB: 2XWQ_C 2DJ5_A 1TJN_A 2XWS_A 3LYH_B 2JH3_D.
Probab=39.87 E-value=17 Score=26.80 Aligned_cols=23 Identities=22% Similarity=0.306 Sum_probs=17.6
Q ss_pred HHHHHHHhhcCccEEEEeCCCCCCCCCchhh
Q 024071 206 SSFIKNMYGLGARKFGVTSLPPLGCLPAART 236 (273)
Q Consensus 206 ~~~i~~L~~~GAR~~vV~~lpplGc~P~~~~ 236 (273)
.+.+++|.+.|+++|+| +|.++.
T Consensus 40 ~~~l~~l~~~g~~~ivv--------vP~fL~ 62 (105)
T PF01903_consen 40 EEALERLVAQGARRIVV--------VPYFLF 62 (105)
T ss_dssp HHCCHHHHCCTCSEEEE--------EEESSS
T ss_pred HHHHHHHHHcCCCeEEE--------Eeeeec
Confidence 34458888999999988 577664
No 56
>TIGR03455 HisG_C-term ATP phosphoribosyltransferase, C-terminal domain. This domain corresponds to the C-terminal third of the HisG protein. It is absent in many lineages.
Probab=39.15 E-value=37 Score=25.33 Aligned_cols=23 Identities=22% Similarity=0.414 Sum_probs=18.9
Q ss_pred HHHHHHHHHHhhcCccEEEEeCC
Q 024071 203 NIFSSFIKNMYGLGARKFGVTSL 225 (273)
Q Consensus 203 ~~i~~~i~~L~~~GAR~~vV~~l 225 (273)
+.+.+.+.+|.++||+.|+|..+
T Consensus 74 ~~v~~~~~~Lk~~GA~~Ilv~~i 96 (100)
T TIGR03455 74 KVVNELIDKLKAAGARDILVLPI 96 (100)
T ss_pred HHHHHHHHHHHHcCCCeEEEech
Confidence 45677789999999999999653
No 57
>KOG4079 consensus Putative mitochondrial ribosomal protein mRpS25 [Translation, ribosomal structure and biogenesis]
Probab=35.58 E-value=18 Score=28.68 Aligned_cols=16 Identities=31% Similarity=0.507 Sum_probs=13.9
Q ss_pred hcCccEEEEeCCCCCC
Q 024071 214 GLGARKFGVTSLPPLG 229 (273)
Q Consensus 214 ~~GAR~~vV~~lpplG 229 (273)
..|||+||++|+|.+.
T Consensus 42 ~~GARdFVfwNipQiQ 57 (169)
T KOG4079|consen 42 QSGARDFVFWNIPQIQ 57 (169)
T ss_pred ccCccceEEecchhhc
Confidence 5799999999998764
No 58
>cd03414 CbiX_SirB_C Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), C-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both CbiX and SirB are found in a wide range of bacteria.
Probab=34.31 E-value=86 Score=23.43 Aligned_cols=18 Identities=28% Similarity=0.495 Sum_probs=14.6
Q ss_pred HHHHHHHHhhcCccEEEE
Q 024071 205 FSSFIKNMYGLGARKFGV 222 (273)
Q Consensus 205 i~~~i~~L~~~GAR~~vV 222 (273)
+.+.+++|.+.|+++++|
T Consensus 47 ~~~~l~~l~~~g~~~i~v 64 (117)
T cd03414 47 LPEALERLRALGARRVVV 64 (117)
T ss_pred HHHHHHHHHHcCCCEEEE
Confidence 456678888899999988
No 59
>cd04236 AAK_NAGS-Urea AAK_NAGS-Urea: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the urea cycle found in animals. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate; NAG is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Ureogenic NAGS activity is dependent on the concentration of glutamate (substrate) and arginine (activator). Domain architecture of ureogenic NAGS consists of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal DUF619 domain. Members of this CD belong to the protein superfamily, the Amino Acid Kinase Family (AAKF).
Probab=33.66 E-value=1.3e+02 Score=26.76 Aligned_cols=45 Identities=13% Similarity=0.065 Sum_probs=34.6
Q ss_pred cCcEEEEEeCcchhhhhhhcCCccCCCCChHHHHHHHHHHHHHHHHHHhhcCccEEEEeCCCC
Q 024071 165 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPP 227 (273)
Q Consensus 165 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~GAR~~vV~~lpp 227 (273)
++..++|-+|+|=+-. ++..+++.+.|..|+.+|.|-|+|.|-+|
T Consensus 34 ~~~f~VIK~GG~~~~~------------------~~~~~~l~~dla~L~~lGl~~VlVHGggp 78 (271)
T cd04236 34 WPAFAVLEVDHSVFRS------------------LEMVQSLSFGLAFLQRMDMKLLVVMGLSA 78 (271)
T ss_pred CCCEEEEEEChhhhcC------------------chhHHHHHHHHHHHHHCCCeEEEEeCCCh
Confidence 5677888899886521 13456677888999999999999998866
No 60
>TIGR02744 TrbI_Ftype type-F conjugative transfer system protein TrbI. This protein is an essential component of the F-type conjugative transfer sytem for plasmid DNA transfer and has been shown to be localized to the periplasm.
Probab=33.55 E-value=73 Score=24.41 Aligned_cols=27 Identities=11% Similarity=0.015 Sum_probs=23.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhC
Q 024071 245 CVSRINTDAQQFNKKASWRQQEVAVEQ 271 (273)
Q Consensus 245 c~~~~n~~~~~~N~~L~~~l~~L~~~~ 271 (273)
-.++.++....||+.|.+.|++..+++
T Consensus 56 te~q~~~~~~rF~~~L~~~L~~yq~~H 82 (112)
T TIGR02744 56 SEAQQKALLGRFNALLEAELQAWQAQH 82 (112)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 356788999999999999999998875
No 61
>cd00419 Ferrochelatase_C Ferrochelatase, C-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway. It catalyzes the insertion of ferrous iron into the protoporphyrin IX ring yielding protoheme. This enzyme is ubiquitous in nature and widely distributed in bacteria and eukaryotes. Recently, some archaeal members have been identified. The oligomeric state of these enzymes varies depending on the presence of a dimerization motif at the C-terminus.
Probab=33.48 E-value=1.2e+02 Score=23.70 Aligned_cols=40 Identities=5% Similarity=0.047 Sum_probs=27.0
Q ss_pred HHHHHHHHhhcCccEEEEeCCCCCCCCCchhhccCCCCCCchHHHHHHHHHHHH
Q 024071 205 FSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNK 258 (273)
Q Consensus 205 i~~~i~~L~~~GAR~~vV~~lpplGc~P~~~~~~~~~~~~c~~~~n~~~~~~N~ 258 (273)
+.+.+++|.+.|+|+|+|. -|.+.. .|.+.+-++-..+-+
T Consensus 79 ~~~~l~~l~~~G~~~i~v~-------p~gF~~-------D~~Etl~di~~e~~~ 118 (135)
T cd00419 79 TDDALEELAKEGVKNVVVV-------PIGFVS-------DHLETLYELDIEYRE 118 (135)
T ss_pred HHHHHHHHHHcCCCeEEEE-------CCcccc-------ccHHHHHHHHHHHHH
Confidence 3456788999999999994 222432 588888777655444
No 62
>cd03411 Ferrochelatase_N Ferrochelatase, N-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway. It catalyzes the insertion of ferrous iron into the protoporphyrin IX ring yielding protoheme. This enzyme is ubiquitous in nature and widely distributed in bacteria and eukaryotes. Recently, some archaeal members have been identified. The oligomeric state of these enzymes varies depending on the presence of a dimerization motif at the C-terminus.
Probab=32.89 E-value=48 Score=26.68 Aligned_cols=24 Identities=17% Similarity=0.243 Sum_probs=19.3
Q ss_pred HHHHHHHHhhcCccEEEEeCCCCC
Q 024071 205 FSSFIKNMYGLGARKFGVTSLPPL 228 (273)
Q Consensus 205 i~~~i~~L~~~GAR~~vV~~lppl 228 (273)
+.+.|++|.+.|+++++|+-+-|.
T Consensus 101 i~~~l~~l~~~g~~~iivlPl~P~ 124 (159)
T cd03411 101 IEEALEELKADGVDRIVVLPLYPQ 124 (159)
T ss_pred HHHHHHHHHHcCCCEEEEEECCcc
Confidence 456679999999999999776553
No 63
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=28.70 E-value=51 Score=25.52 Aligned_cols=22 Identities=14% Similarity=0.045 Sum_probs=18.5
Q ss_pred HHHHHHHHHHhhcCccEEEEeC
Q 024071 203 NIFSSFIKNMYGLGARKFGVTS 224 (273)
Q Consensus 203 ~~i~~~i~~L~~~GAR~~vV~~ 224 (273)
.++.+.+++|.+.|+|+|+|..
T Consensus 56 p~~~eaL~~l~~~G~~~V~V~P 77 (127)
T cd03412 56 DTPEEALAKLAADGYTEVIVQS 77 (127)
T ss_pred CCHHHHHHHHHHCCCCEEEEEe
Confidence 4567888999999999999943
No 64
>cd03311 CIMS_C_terminal_like CIMS - Cobalamine-independent methonine synthase, or MetE, C-terminal domain_like. Many members have been characterized as 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferases, EC:2.1.1.14, mostly from bacteria and plants. This enzyme catalyses the last step in the production of methionine by transferring a methyl group from 5-methyltetrahydrofolate to L-homocysteine without using an intermediate methyl carrier. The active enzyme has a dual (beta-alpha)8-barrel structure, and this model covers the C-terminal barrel, and a few single-barrel sequences most similar to the C-terminal barrel. It is assumed that the homologous N-terminal barrel has evolved from the C-terminus via gene duplication and has subsequently lost binding sites, and it seems as if the two barrels forming the active enzyme may sometimes reside on different polypeptides. The C-terminal domain incorporates the Zinc ion, which binds and activates homocysteine. Sidechains from
Probab=28.37 E-value=2.2e+02 Score=25.70 Aligned_cols=38 Identities=21% Similarity=0.286 Sum_probs=29.0
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhcCccEEEEeCCCCCCCC
Q 024071 193 TPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCL 231 (273)
Q Consensus 193 ~~~~~v~~vv~~i~~~i~~L~~~GAR~~vV~~lpplGc~ 231 (273)
+..+++..++..+...++.|+++|++ ++.+.=|.+...
T Consensus 145 ~~~el~~~la~~~~~e~~~l~~aG~~-~iQiDEP~l~~~ 182 (332)
T cd03311 145 SREELAMDLALALREEIRDLYDAGCR-YIQIDEPALAEG 182 (332)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCC-EEEeecchhhcc
Confidence 45679999999999999999999996 444444444443
No 65
>PRK06233 hypothetical protein; Provisional
Probab=28.24 E-value=95 Score=28.86 Aligned_cols=32 Identities=25% Similarity=0.465 Sum_probs=28.0
Q ss_pred ChHHHHHHHHHHHHHHHHHHhhcCccEEEEeC
Q 024071 193 TPEQYSSMLVNIFSSFIKNMYGLGARKFGVTS 224 (273)
Q Consensus 193 ~~~~~v~~vv~~i~~~i~~L~~~GAR~~vV~~ 224 (273)
+.++++..++..+.+.++.|+++|+|.|-+=.
T Consensus 161 ~~eel~~dlA~a~~~Ei~~L~~aG~~~IQiDe 192 (372)
T PRK06233 161 SWDDYLDDLAQAYHDTIQHFYDLGARYIQLDD 192 (372)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEcC
Confidence 45789999999999999999999999987643
No 66
>smart00340 HALZ homeobox associated leucin zipper.
Probab=27.25 E-value=63 Score=20.17 Aligned_cols=16 Identities=19% Similarity=0.131 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHHHHh
Q 024071 255 QFNKKASWRQQEVAVE 270 (273)
Q Consensus 255 ~~N~~L~~~l~~L~~~ 270 (273)
.-|.+|+..|++||+.
T Consensus 19 eeNrRL~ke~~eLral 34 (44)
T smart00340 19 EENRRLQKEVQELRAL 34 (44)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 4699999999999863
No 67
>KOG2794 consensus Delta-aminolevulinic acid dehydratase [Coenzyme transport and metabolism]
Probab=26.64 E-value=77 Score=28.26 Aligned_cols=55 Identities=16% Similarity=0.132 Sum_probs=35.7
Q ss_pred cCcEEEEEeCcchhhhhhhcCCccCCCCChHHHHHHHHHHHHHHHHHHhhcCccEEEEeCCCC
Q 024071 165 KDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPP 227 (273)
Q Consensus 165 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~GAR~~vV~~lpp 227 (273)
++-+|-++|--||-... + ..+......--++.+++.+..|.+.|.|-+++++++|
T Consensus 39 ~nliyPlFI~e~~dd~~----p----I~SmPg~~r~G~~rL~e~l~plv~~Gl~sViLfgvv~ 93 (340)
T KOG2794|consen 39 ANLIYPLFIHEGEDDFT----P----IDSMPGIYRLGVNRLKEELAPLVAKGLRSVILFGVVP 93 (340)
T ss_pred hheeeeEEEecCccccc----c----cccCCchhHHHHHHHHHHHHHHHHhccceEEEecCCC
Confidence 55567667666654311 0 1122222234567789999999999999999999864
No 68
>cd04824 eu_ALAD_PBGS_cysteine_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. The eukaryotic PBGSs represented by this model, which contain a cysteine-rich zinc binding motif (DXCXCX(Y/F)X3G(H/Q)CG), require zinc for their activity, they
Probab=25.98 E-value=90 Score=28.39 Aligned_cols=27 Identities=22% Similarity=0.340 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHhhcCccEEEEeCCCC
Q 024071 201 LVNIFSSFIKNMYGLGARKFGVTSLPP 227 (273)
Q Consensus 201 vv~~i~~~i~~L~~~GAR~~vV~~lpp 227 (273)
-++.+.+.++++.++|.+.|+++++|+
T Consensus 49 s~d~l~~~~~~~~~~Gi~~v~LFgv~~ 75 (320)
T cd04824 49 GVNRLEEFLRPLVAKGLRSVILFGVPL 75 (320)
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCCc
Confidence 356778888999999999999999964
No 69
>PF08331 DUF1730: Domain of unknown function (DUF1730); InterPro: IPR013542 This domain of unknown function occurs in iron-sulphur cluster-binding proteins together with the 4Fe-4S binding domain (IPR001450 from INTERPRO).
Probab=25.97 E-value=1.2e+02 Score=21.23 Aligned_cols=16 Identities=31% Similarity=0.227 Sum_probs=11.7
Q ss_pred hcCccEEEEeCCCCCC
Q 024071 214 GLGARKFGVTSLPPLG 229 (273)
Q Consensus 214 ~~GAR~~vV~~lpplG 229 (273)
=.|||.|+|..++=..
T Consensus 8 ~p~arSvIv~a~~Y~~ 23 (78)
T PF08331_consen 8 LPGARSVIVLAFPYYP 23 (78)
T ss_pred CCCCcEEEEEEccCCC
Confidence 3589999998876433
No 70
>cd03413 CbiK_C Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), C-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases, and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=25.80 E-value=64 Score=24.08 Aligned_cols=17 Identities=12% Similarity=0.300 Sum_probs=14.3
Q ss_pred HHHHHHHhhcCccEEEE
Q 024071 206 SSFIKNMYGLGARKFGV 222 (273)
Q Consensus 206 ~~~i~~L~~~GAR~~vV 222 (273)
.+.+++|.+.|+|+|++
T Consensus 45 ~~~l~~l~~~G~~~i~l 61 (103)
T cd03413 45 DDVLAKLKKAGIKKVTL 61 (103)
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 55578889999999988
No 71
>cd03415 CbiX_CbiC Archaeal sirohydrochlorin cobalt chelatase (CbiX) single domain. Proteins in this subgroup contain a single CbiX domain N-terminal to a precorrin-8X methylmutase (CbiC) domain. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, while CbiC catalyzes the conversion of cobalt-precorrin 8 to cobyrinic acid by methyl rearrangement. Both CbiX and CbiC are involved in vitamin B12 biosynthesis.
Probab=25.75 E-value=62 Score=25.15 Aligned_cols=19 Identities=5% Similarity=0.265 Sum_probs=16.4
Q ss_pred HHHHHHHHhhcCccEEEEe
Q 024071 205 FSSFIKNMYGLGARKFGVT 223 (273)
Q Consensus 205 i~~~i~~L~~~GAR~~vV~ 223 (273)
+.+.+++|.+.|+++|+|.
T Consensus 46 l~~~l~~l~~~G~~~ivVv 64 (125)
T cd03415 46 WRDLLNELLSEGYGHIIIA 64 (125)
T ss_pred HHHHHHHHHHCCCCEEEEe
Confidence 6677899999999999885
No 72
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings. This family includes protoporphyrin IX ferrochelatase (HemH), sirohydrochlorin ferrochelatase (SirB) and the cobaltochelatases, CbiK and CbiX. HemH and SirB are involved in heme and siroheme biosynthesis, respectively, while the cobaltochelatases are associated with cobalamin biosynthesis. Excluded from this family are the ATP-dependent heterotrimeric chelatases (class I) and the multifunctional homodimeric enzymes with dehydrogenase and chelatase activities (class III).
Probab=24.55 E-value=1e+02 Score=22.14 Aligned_cols=23 Identities=17% Similarity=0.310 Sum_probs=17.3
Q ss_pred HHHHHHHHhhcCccEEEEeCCCC
Q 024071 205 FSSFIKNMYGLGARKFGVTSLPP 227 (273)
Q Consensus 205 i~~~i~~L~~~GAR~~vV~~lpp 227 (273)
+.+.+++|.+.|.++++|.-+.+
T Consensus 47 i~~~l~~l~~~g~~~vvvvPl~~ 69 (101)
T cd03409 47 TEEAIRELAEEGYQRVVIVPLAP 69 (101)
T ss_pred HHHHHHHHHHcCCCeEEEEeCcc
Confidence 34567889899999999955444
No 73
>CHL00202 argB acetylglutamate kinase; Provisional
Probab=24.39 E-value=2.9e+02 Score=24.46 Aligned_cols=63 Identities=14% Similarity=0.093 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHHHhCchhhhhhhcCcEEEEEeCcchhhhhhhcCCccCCCCChHHHHHHHHHHHHHHHHHHhhcCcc
Q 024071 139 QQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGAR 218 (273)
Q Consensus 139 ~Qv~~f~~~~~~~~~~~G~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~GAR 218 (273)
+++++|.+..+.+. .+++..++|-+|++=... +.+.+.+.+.|..|...|.+
T Consensus 6 ~~~~~~~~~~pyi~----------~~~~~~~VIk~gG~~~~~------------------~~l~~~~~~di~~l~~~g~~ 57 (284)
T CHL00202 6 ERVQVLSEALPYIQ----------KFRGRIMVIKYGGAAMKN------------------LILKADIIKDILFLSCIGLK 57 (284)
T ss_pred HHHHHHHHHHHHHH----------HHcCCeEEEEEChHHhcC------------------cchHHHHHHHHHHHHHCCCc
Confidence 56778877655443 246678999999865421 01234455667888999999
Q ss_pred EEEEeCCCCCC
Q 024071 219 KFGVTSLPPLG 229 (273)
Q Consensus 219 ~~vV~~lpplG 229 (273)
-++|.|-+|.+
T Consensus 58 ~VlVHGgg~~i 68 (284)
T CHL00202 58 IVVVHGGGPEI 68 (284)
T ss_pred EEEEeCCcHHH
Confidence 99999887743
No 74
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=23.91 E-value=32 Score=28.75 Aligned_cols=15 Identities=47% Similarity=0.696 Sum_probs=12.6
Q ss_pred CCEEEEeCCccccCC
Q 024071 35 VPAIITFGDSAVDVG 49 (273)
Q Consensus 35 ~~~l~vFGDSlsD~G 49 (273)
.+.+++||||.+|.-
T Consensus 202 ~~~~~~~GD~~ND~~ 216 (254)
T PF08282_consen 202 PEDIIAFGDSENDIE 216 (254)
T ss_dssp GGGEEEEESSGGGHH
T ss_pred cceeEEeecccccHh
Confidence 457999999999973
No 75
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=23.21 E-value=95 Score=26.65 Aligned_cols=47 Identities=11% Similarity=0.315 Sum_probs=23.8
Q ss_pred EEEeCcchhhhhhhcCCccCCCCChHHHHHHHHHHHHHHHHHHhhcCccEEEEeC
Q 024071 170 IVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTS 224 (273)
Q Consensus 170 ~i~iG~ND~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~i~~L~~~GAR~~vV~~ 224 (273)
.++.|.+.+...|- .. . .... +....-+.+.++.|...|.|+|+++|
T Consensus 61 ~i~yG~s~~h~~fp-GT-i--sl~~----~t~~~~l~di~~sl~~~Gf~~ivivn 107 (237)
T PF02633_consen 61 PIPYGCSPHHMGFP-GT-I--SLSP----ETLIALLRDILRSLARHGFRRIVIVN 107 (237)
T ss_dssp -B--BB-GCCTTST-T--B--BB-H----HHHHHHHHHHHHHHHHHT--EEEEEE
T ss_pred CCccccCcccCCCC-Ce-E--EeCH----HHHHHHHHHHHHHHHHcCCCEEEEEE
Confidence 35788888765431 11 0 1122 22334455667888899999999987
No 76
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=23.11 E-value=43 Score=29.31 Aligned_cols=16 Identities=25% Similarity=0.439 Sum_probs=13.4
Q ss_pred CCCEEEEeCCccccCC
Q 024071 34 LVPAIITFGDSAVDVG 49 (273)
Q Consensus 34 ~~~~l~vFGDSlsD~G 49 (273)
..+.+++||||..|.-
T Consensus 205 ~~~~viafGDs~NDi~ 220 (271)
T PRK03669 205 TRPTTLGLGDGPNDAP 220 (271)
T ss_pred CCceEEEEcCCHHHHH
Confidence 3568999999999974
No 77
>PF09677 TrbI_Ftype: Type-F conjugative transfer system protein (TrbI_Ftype); InterPro: IPR014115 This entry represents TrbI, an essential component of the F-type conjugative transfer system for plasmid DNA transfer that has been shown to be localized to the periplasm [, ].
Probab=21.68 E-value=1.5e+02 Score=22.60 Aligned_cols=26 Identities=15% Similarity=0.153 Sum_probs=22.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhC
Q 024071 246 VSRINTDAQQFNKKASWRQQEVAVEQ 271 (273)
Q Consensus 246 ~~~~n~~~~~~N~~L~~~l~~L~~~~ 271 (273)
.++....+..||+.|.+.|+++.+++
T Consensus 56 ~~q~~a~t~~F~~aL~~~L~~~~~~h 81 (111)
T PF09677_consen 56 PEQVEALTQRFMQALEASLAEYQAEH 81 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 45677889999999999999998764
No 78
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=21.49 E-value=51 Score=28.45 Aligned_cols=17 Identities=24% Similarity=0.290 Sum_probs=14.2
Q ss_pred CCEEEEeCCccccCCCC
Q 024071 35 VPAIITFGDSAVDVGNN 51 (273)
Q Consensus 35 ~~~l~vFGDSlsD~Gn~ 51 (273)
.+.+++||||.+|..=.
T Consensus 194 ~~~~~a~GD~~ND~~Ml 210 (256)
T TIGR01486 194 AIKVVGLGDSPNDLPLL 210 (256)
T ss_pred CceEEEEcCCHhhHHHH
Confidence 66899999999997643
No 79
>PRK00035 hemH ferrochelatase; Reviewed
Probab=20.29 E-value=1.8e+02 Score=26.34 Aligned_cols=45 Identities=11% Similarity=0.142 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhcCccEEEEeCCCCCCCCCchhhccCCCCCCchHHHHHHHHHHHHHHHH
Q 024071 204 IFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKASW 262 (273)
Q Consensus 204 ~i~~~i~~L~~~GAR~~vV~~lpplGc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~ 262 (273)
.+.+.+++|.+.|.|+|+| .|..... .|++.+.++...+-+.+.+
T Consensus 249 ~~~~~l~~l~~~g~k~V~v--------~P~~Fv~------D~lEtl~ei~~e~~~~~~~ 293 (333)
T PRK00035 249 YTDDTLEELAEKGVKKVVV--------VPPGFVS------DHLETLEEIDIEYREIAEE 293 (333)
T ss_pred CHHHHHHHHHHcCCCeEEE--------ECCeeec------cchhHHHHHHHHHHHHHHH
No 80
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=20.10 E-value=48 Score=27.79 Aligned_cols=16 Identities=19% Similarity=0.218 Sum_probs=12.9
Q ss_pred CCCEEEEeCCccccCC
Q 024071 34 LVPAIITFGDSAVDVG 49 (273)
Q Consensus 34 ~~~~l~vFGDSlsD~G 49 (273)
....+++||||..|.-
T Consensus 194 ~~~~vi~~GD~~NDi~ 209 (221)
T TIGR02463 194 PDVKTLGLGDGPNDLP 209 (221)
T ss_pred CCCcEEEECCCHHHHH
Confidence 4557999999999864
Done!