BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024076
(273 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M2S6|SDIR1_ARATH E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana GN=SDIR1
PE=1 SV=1
Length = 273
Score = 392 bits (1006), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 222/275 (80%), Gaps = 4/275 (1%)
Query: 1 MSFVFRGSRADLETGFPG-FIPERRTVRIHAGRPVNSNSLAFLVTVLLLFMILNSHQMSS 59
MSFVFRGSR DLE+GF G F+PERR +R+H RPVNSNSLAFLVTVLLLFMILNSHQM
Sbjct: 1 MSFVFRGSRGDLESGFSGGFLPERRAMRVHGARPVNSNSLAFLVTVLLLFMILNSHQMPP 60
Query: 60 NFLLWIVLGIFLLATSLRMYATC-QQLHAQAQAHAVASGLLGHTELRLQMPPAIAFASRG 118
NFLLW+VLG+FL+AT+LRMYATC Q A ASGL HTELRL +PP+IA A+RG
Sbjct: 61 NFLLWLVLGVFLMATTLRMYATCQQLQAHAQAQAAAASGLFSHTELRLHVPPSIALATRG 120
Query: 119 RLQGLRLQLALLDREFDELDYETLRALDADNVPTAASMSEEEINTLPVHKYKVSGSQSGA 178
RLQGLRLQLALLDREFD+LDYETLRALD+DNV T SMSEEEIN LPVHKYKV ++G
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNVST-TSMSEEEINALPVHKYKVLDPENGC 179
Query: 179 SSMQLGSSSSPAEKKLETSISVGNLKTEDELTCTVCLEQVNVGEIVRSLPCLHQFHANCI 238
S + S+SS AEK L+ S + TEDELTC+VCLEQV VGEIVR+LPCLHQFHA CI
Sbjct: 180 SLAKQASTSSSAEKMLD-SANESKKGTEDELTCSVCLEQVTVGEIVRTLPCLHQFHAGCI 238
Query: 239 DPWLRQQGTCPVCKLRAGSGWHETRQVEMDASYMV 273
DPWLRQQGTCPVCK RA SGW E +++ DAS MV
Sbjct: 239 DPWLRQQGTCPVCKFRAHSGWQEQDEIDDDASDMV 273
>sp|Q8VEM1|GOLI_MOUSE E3 ubiquitin-protein ligase RNF130 OS=Mus musculus GN=Rnf130 PE=2
SV=1
Length = 419
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 182 QLGSSSSPAEKKLET-SISVGNLKTEDELT-CTVCLEQVNVGEIVRSLPCLHQFHANCID 239
+LG ++ A KL T ++ G+ +T+ + C VC+E ++VR LPC H FH +C+D
Sbjct: 233 RLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLPCKHVFHKSCVD 292
Query: 240 PWLRQQGTCPVCKL 253
PWL + TCP+CKL
Sbjct: 293 PWLSEHCTCPMCKL 306
>sp|Q6Y290|GOLI_RAT E3 ubiquitin-protein ligase RNF130 OS=Rattus norvegicus GN=Rnf130
PE=1 SV=1
Length = 419
Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 182 QLGSSSSPAEKKLET-SISVGNLKTEDELT-CTVCLEQVNVGEIVRSLPCLHQFHANCID 239
+LG ++ A KL T ++ G+ +T+ + C VC+E ++VR LPC H FH +C+D
Sbjct: 233 RLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLPCKHVFHKSCVD 292
Query: 240 PWLRQQGTCPVCKL 253
PWL + TCP+CKL
Sbjct: 293 PWLSEHCTCPMCKL 306
>sp|Q86XS8|GOLI_HUMAN E3 ubiquitin-protein ligase RNF130 OS=Homo sapiens GN=RNF130 PE=1
SV=1
Length = 419
Score = 71.2 bits (173), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 182 QLGSSSSPAEKKLET-SISVGNLKTEDELT-CTVCLEQVNVGEIVRSLPCLHQFHANCID 239
+LG ++ A KL T ++ G+ +T+ + C VC+E ++VR LPC H FH +C+D
Sbjct: 233 RLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFHKSCVD 292
Query: 240 PWLRQQGTCPVCKL 253
PWL + TCP+CKL
Sbjct: 293 PWLSEHCTCPMCKL 306
>sp|Q5DTZ6|RN150_MOUSE RING finger protein 150 OS=Mus musculus GN=Rnf150 PE=2 SV=2
Length = 437
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 182 QLGSSSSPAEKKLET-SISVGNLKTEDEL-TCTVCLEQVNVGEIVRSLPCLHQFHANCID 239
+LG ++ A KL+ +I G+ +TE + C VC+E ++VR LPC H FH +C+D
Sbjct: 246 RLGDAAKKAISKLQVRTIRKGDKETESDFDNCAVCIEGYKPNDVVRILPCRHLFHKSCVD 305
Query: 240 PWLRQQGTCPVCKL 253
PWL TCP+CK+
Sbjct: 306 PWLLDHRTCPMCKM 319
>sp|Q9ULK6|RN150_HUMAN RING finger protein 150 OS=Homo sapiens GN=RNF150 PE=2 SV=2
Length = 438
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 182 QLGSSSSPAEKKLET-SISVGNLKTEDEL-TCTVCLEQVNVGEIVRSLPCLHQFHANCID 239
+LG ++ A KL+ +I G+ +TE + C VC+E ++VR LPC H FH +C+D
Sbjct: 247 RLGDAAKKAISKLQIRTIKKGDKETESDFDNCAVCIEGYKPNDVVRILPCRHLFHKSCVD 306
Query: 240 PWLRQQGTCPVCKL 253
PWL TCP+CK+
Sbjct: 307 PWLLDHRTCPMCKM 320
>sp|Q06003|GOLI_DROME Protein goliath OS=Drosophila melanogaster GN=gol PE=2 SV=3
Length = 461
Score = 67.8 bits (164), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 180 SMQLGSSSSPAEKKLETSISVGNLKTEDELT---CTVCLEQVNVGEIVRSLPCLHQFHAN 236
S L S + A K+ T G E +L C +C+E + +R LPC H+FH N
Sbjct: 271 SRNLCSVTKKAIMKIPTK--TGKFSDEKDLDSDCCAICIEAYKPTDTIRILPCKHEFHKN 328
Query: 237 CIDPWLRQQGTCPVCKL 253
CIDPWL + TCP+CKL
Sbjct: 329 CIDPWLIEHRTCPMCKL 345
>sp|Q8NC42|RN149_HUMAN E3 ubiquitin-protein ligase RNF149 OS=Homo sapiens GN=RNF149 PE=2
SV=2
Length = 400
Score = 67.8 bits (164), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 166 VHKYKVSGSQSGASSMQLGSSSSPAEKKLETSISVGNLKTEDELTCTVCLEQVNVGEIVR 225
+ ++ +GSQ G+ S + + + L T D C VC+E V +I+R
Sbjct: 224 IQRFLYTGSQIGSQSHRKETKKVIGQLLLHTVKHGEKGIDVDAENCAVCIENFKVKDIIR 283
Query: 226 SLPCLHQFHANCIDPWLRQQGTCPVCKL---RAGSGWHETRQVE 266
LPC H FH CIDPWL TCP+CKL +A W E V+
Sbjct: 284 ILPCKHIFHRICIDPWLLDHRTCPMCKLDVIKALGYWGEPGDVQ 327
>sp|Q566M8|RN150_DANRE RING finger protein 150 OS=Danio rerio GN=rnf150 PE=2 SV=1
Length = 419
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 182 QLGSSSSPAEKKLET-SISVGNLKTEDEL-TCTVCLEQVNVGEIVRSLPCLHQFHANCID 239
+LG ++ A +L+ +I G+ +TE + C VC+E ++VR LPC H FH C+D
Sbjct: 236 RLGDAAKKAISQLQVRTIRKGDQETESDFDNCAVCIEGYKPNDVVRILPCRHLFHKCCVD 295
Query: 240 PWLRQQGTCPVCKL 253
PWL TCP+CK+
Sbjct: 296 PWLVDHRTCPMCKM 309
>sp|Q7TPV2|DZIP3_MOUSE E3 ubiquitin-protein ligase DZIP3 OS=Mus musculus GN=Dzip3 PE=2 SV=2
Length = 1204
Score = 66.2 bits (160), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 9/120 (7%)
Query: 134 FDELDYETLRALDADNVPTAASMSEEEINTLPVHKYKVSGSQSGASSMQLGSSSSPAEKK 193
FDE+ Y+ + ++ + +++ N P H + S Q GS++ +K
Sbjct: 1075 FDEIVYKISQMIEPKKSESEEKSAQDGNNASPSHTASQPNAPQDPKSAQ-GSATWEGDKD 1133
Query: 194 LETSISVGNLKTEDELTCTVCLEQVNVGEIVRSLPCLHQFHANCIDPWLRQQGTCPVCKL 253
++ E+E C +C E ++ E + LPC H+FH+ CI PWL QQGTCP C+L
Sbjct: 1134 MDNE-------EEEEEPCVICHENLS-PENLSVLPCAHKFHSQCIRPWLMQQGTCPTCRL 1185
>sp|Q7T0Q3|R126A_XENLA RING finger protein 126-A OS=Xenopus laevis GN=rnf126-a PE=2 SV=1
Length = 312
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 29/44 (65%)
Query: 209 LTCTVCLEQVNVGEIVRSLPCLHQFHANCIDPWLRQQGTCPVCK 252
L C VC E VGE VR LPC H FH +CI PWL Q TCPVC+
Sbjct: 226 LECPVCKEDYTVGECVRQLPCNHLFHNDCIIPWLEQHDTCPVCR 269
>sp|Q3U2C5|RN149_MOUSE E3 ubiquitin-protein ligase RNF149 OS=Mus musculus GN=Rnf149 PE=2
SV=3
Length = 394
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%)
Query: 166 VHKYKVSGSQSGASSMQLGSSSSPAEKKLETSISVGNLKTEDELTCTVCLEQVNVGEIVR 225
+ ++ +GSQ G+ + + + + L T D C VC+E V +++R
Sbjct: 220 IQRFLYTGSQFGSQNHRKETKKVIGQLPLHTVKHGEKGIDVDAENCAVCIENFKVKDVIR 279
Query: 226 SLPCLHQFHANCIDPWLRQQGTCPVCKL 253
LPC H FH CIDPWL TCP+CKL
Sbjct: 280 ILPCKHIFHRICIDPWLLDHRTCPMCKL 307
>sp|Q6DIP3|RN126_XENTR RING finger protein 126 OS=Xenopus tropicalis GN=rnf126 PE=2 SV=1
Length = 311
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 29/44 (65%)
Query: 209 LTCTVCLEQVNVGEIVRSLPCLHQFHANCIDPWLRQQGTCPVCK 252
L C VC E VGE VR LPC H FH +CI PWL Q TCPVC+
Sbjct: 225 LECPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCR 268
>sp|Q6ZSG1|RN165_HUMAN RING finger protein 165 OS=Homo sapiens GN=RNF165 PE=1 SV=1
Length = 346
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 50/117 (42%), Gaps = 21/117 (17%)
Query: 139 YETLRALDA--DNVPTAASMSEEEINTLPVHKYKVSGSQSGASSMQLGSSSSPAEKKLET 196
YE L L+ NV A + E T P HKYK Q G G S EK
Sbjct: 239 YEELLQLEDRLGNVTRGAVQNTIERFTFP-HKYKKRRPQDGKGKKDEGEESDTDEK---- 293
Query: 197 SISVGNLKTEDELTCTVCLEQVNVGEIVRSLPCLHQFHANCIDPWLRQQGTCPVCKL 253
CT+CL + GE VR LPC+H FH C+D WL CP+C++
Sbjct: 294 --------------CTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRV 336
>sp|Q6IRP0|R126B_XENLA RING finger protein 126-B OS=Xenopus laevis GN=rnf126-b PE=2 SV=1
Length = 312
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 29/44 (65%)
Query: 209 LTCTVCLEQVNVGEIVRSLPCLHQFHANCIDPWLRQQGTCPVCK 252
L C VC E VGE VR LPC H FH +CI PWL Q TCPVC+
Sbjct: 226 LECPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCR 269
>sp|Q6NRX0|RN149_XENLA E3 ubiquitin-protein ligase RNF149 OS=Xenopus laevis GN=rnf149 PE=2
SV=1
Length = 397
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 12/94 (12%)
Query: 166 VHKYKVSGSQSGASSMQLGSSSSPAE------KKLETSISVGNLKTEDELTCTVCLEQVN 219
+ ++ +G+Q G S + + + ++ KK E I + D C VC+E
Sbjct: 219 IQRFLYTGAQCGNQSNRKETKKAISQLQLHRVKKGEKGIDI------DAENCAVCIENYK 272
Query: 220 VGEIVRSLPCLHQFHANCIDPWLRQQGTCPVCKL 253
++VR LPC H FH CIDPWL + TCP+CKL
Sbjct: 273 TKDLVRILPCKHIFHRLCIDPWLIEHRTCPMCKL 306
>sp|Q9D0C1|RN115_MOUSE E3 ubiquitin-protein ligase RNF115 OS=Mus musculus GN=Rnf115 PE=1
SV=1
Length = 305
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 189 PAEKKLETS---ISVGNLKTEDELTCTVCLEQVNVGEIVRSLPCLHQFHANCIDPWLRQQ 245
PA+K+ TS ++V + L C VC E V E VR LPC H FH++CI PWL
Sbjct: 204 PADKEKITSLPTVTVTQEQVNTGLECPVCKEDYTVEEKVRQLPCNHFFHSSCIVPWLELH 263
Query: 246 GTCPVCKLRAGSGWHETRQVE 266
TCPVC+ ++ +G TRQ +
Sbjct: 264 DTCPVCR-KSLNGEDSTRQTQ 283
>sp|Q9C1X4|YKW3_SCHPO Uncharacterized RING finger protein P32A8.03c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAP32A8.03c PE=4 SV=1
Length = 513
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 206 EDELTCTVCLEQVNVGEIVRSLPCLHQFHANCIDPWLRQQGTCPVCKLRAGSGWHETRQV 265
++E CT+C+E + + V LPC H FH NCI PWLR GTC +C+ +
Sbjct: 391 DEEGECTICMEMFKINDDVIQLPCKHYFHENCIKPWLRVNGTCAICRAPVDPNSQQRNNT 450
Query: 266 EMDAS 270
D++
Sbjct: 451 STDSA 455
>sp|Q9FKX5|NIPL1_ARATH NEP1-interacting protein-like 1 OS=Arabidopsis thaliana GN=ATL27
PE=2 SV=1
Length = 221
Score = 64.3 bits (155), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 209 LTCTVCLEQVNVGEIVRSLP-CLHQFHANCIDPWLRQQGTCPVCK 252
++C+VCL+ VGE VRSLP C H FH CID WLR+ +CP+C+
Sbjct: 174 VSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCPLCR 218
>sp|Q14B02|RN133_MOUSE E3 ubiquitin-protein ligase RNF133 OS=Mus musculus GN=Rnf133 PE=1
SV=1
Length = 382
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 192 KKLETSISVGNLKTEDEL------TCTVCLEQVNVGEIVRSLPCLHQFHANCIDPWLRQQ 245
KK + V LK DE +C +C E EIVR L C H FH NCIDPW+
Sbjct: 231 KKAFGQLQVRVLKEGDEEVNPNADSCVICFEAYKPNEIVRILTCKHFFHKNCIDPWILAH 290
Query: 246 GTCPVCK 252
GTCP+CK
Sbjct: 291 GTCPMCK 297
>sp|Q07G42|RNF12_XENTR E3 ubiquitin-protein ligase RNF12 OS=Xenopus tropicalis GN=rnf12
PE=2 SV=1
Length = 639
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 197 SISVGNLKTEDEL-TCTVCLEQVNVGEIVRSLPCLHQFHANCIDPWLRQQGTCPVCK 252
++S N D L TC+VC+ + G +R LPC H++H +CID WL + TCP+C+
Sbjct: 570 NLSTRNFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICR 626
>sp|Q6AY01|RN133_RAT E3 ubiquitin-protein ligase RNF133 OS=Rattus norvegicus GN=Rnf133
PE=2 SV=1
Length = 381
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 192 KKLETSISVGNLKTEDEL------TCTVCLEQVNVGEIVRSLPCLHQFHANCIDPWLRQQ 245
KK + V LK DE +C +C E EIVR L C H FH NCIDPW+
Sbjct: 231 KKAFGQLQVRILKEGDEEVSPNADSCVICFEAYKPNEIVRILTCKHFFHKNCIDPWILAH 290
Query: 246 GTCPVCK 252
GTCP+CK
Sbjct: 291 GTCPMCK 297
>sp|Q9Y4L5|RN115_HUMAN E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens GN=RNF115 PE=1
SV=2
Length = 304
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 189 PAEKKLETS---ISVGNLKTEDELTCTVCLEQVNVGEIVRSLPCLHQFHANCIDPWLRQQ 245
PA+K+ TS ++V + + L C VC E V E VR LPC H FH++CI PWL
Sbjct: 203 PADKEKITSLPTVTVTQEQVDMGLECPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELH 262
Query: 246 GTCPVCKLRAGSGWHETRQVE 266
TCPVC+ ++ +G TRQ +
Sbjct: 263 DTCPVCR-KSLNGEDSTRQSQ 282
>sp|Q95K04|RN133_MACFA E3 ubiquitin-protein ligase RNF133 OS=Macaca fascicularis GN=RNF133
PE=2 SV=1
Length = 376
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 28/43 (65%)
Query: 210 TCTVCLEQVNVGEIVRSLPCLHQFHANCIDPWLRQQGTCPVCK 252
+C +C E +IVR L C H FH NCIDPW+ GTCP+CK
Sbjct: 255 SCVICFEHYKPNDIVRILTCKHFFHKNCIDPWILSHGTCPICK 297
>sp|Q641J8|RF12A_XENLA E3 ubiquitin-protein ligase RNF12-A OS=Xenopus laevis GN=rnf12-a
PE=1 SV=1
Length = 622
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 197 SISVGNLKTEDEL-TCTVCLEQVNVGEIVRSLPCLHQFHANCIDPWLRQQGTCPVCK 252
++S N D L TC+VC+ + G +R LPC H++H +CID WL + TCP+C+
Sbjct: 553 NLSTRNFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICR 609
>sp|Q8LBA0|NIPL2_ARATH NEP1-interacting protein-like 2 OS=Arabidopsis thaliana GN=ATL24
PE=1 SV=2
Length = 223
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Query: 211 CTVCLEQVNVGEIVRSLP-CLHQFHANCIDPWLRQQGTCPVCK 252
CT+CL+ + GEI RSLP C H FH C+D WL + G+CP+C+
Sbjct: 176 CTICLQDIKTGEITRSLPKCDHTFHLVCVDKWLIRHGSCPICR 218
>sp|Q8WVZ7|RN133_HUMAN E3 ubiquitin-protein ligase RNF133 OS=Homo sapiens GN=RNF133 PE=2
SV=1
Length = 376
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 29/43 (67%)
Query: 210 TCTVCLEQVNVGEIVRSLPCLHQFHANCIDPWLRQQGTCPVCK 252
+C +C E+ +IVR L C H FH NCIDPW+ GTCP+CK
Sbjct: 255 SCVICFERYKPNDIVRILTCKHFFHKNCIDPWILPHGTCPICK 297
>sp|Q9NVW2|RNF12_HUMAN E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3
Length = 624
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 210 TCTVCLEQVNVGEIVRSLPCLHQFHANCIDPWLRQQGTCPVCK 252
TC+VC+ + G +R LPC H++H +CID WL + TCP+C+
Sbjct: 569 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICR 611
>sp|Q9WTV7|RNF12_MOUSE E3 ubiquitin-protein ligase RLIM OS=Mus musculus GN=Rlim PE=1 SV=2
Length = 600
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 210 TCTVCLEQVNVGEIVRSLPCLHQFHANCIDPWLRQQGTCPVCK 252
TC+VC+ + G +R LPC H++H +CID WL + TCP+C+
Sbjct: 545 TCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICR 587
>sp|E9QAU8|RN165_MOUSE RING finger protein 165 OS=Mus musculus GN=Rnf165 PE=2 SV=1
Length = 347
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 49/117 (41%), Gaps = 21/117 (17%)
Query: 139 YETLRALDA--DNVPTAASMSEEEINTLPVHKYKVSGSQSGASSMQLGSSSSPAEKKLET 196
YE L L+ NV A + E T P HKYK Q G S EK
Sbjct: 240 YEELLQLEDRLGNVTRGAVQNTIERFTFP-HKYKKRRPQDSKGKKDEGEESDTDEK---- 294
Query: 197 SISVGNLKTEDELTCTVCLEQVNVGEIVRSLPCLHQFHANCIDPWLRQQGTCPVCKL 253
CT+CL + GE VR LPC+H FH C+D WL CP+C++
Sbjct: 295 --------------CTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRV 337
>sp|Q7T037|RF12B_XENLA E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis GN=rnf12-b
PE=2 SV=1
Length = 757
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 197 SISVGNLKTEDEL-TCTVCLEQVNVGEIVRSLPCLHQFHANCIDPWLRQQGTCPVCK 252
++S N D L TC+VC+ + G +R LPC H++H +CID WL + TCP+C+
Sbjct: 688 NLSTRNYGENDALKTCSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICR 744
>sp|Q68DV7|RNF43_HUMAN E3 ubiquitin-protein ligase RNF43 OS=Homo sapiens GN=RNF43 PE=1
SV=1
Length = 783
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%)
Query: 211 CTVCLEQVNVGEIVRSLPCLHQFHANCIDPWLRQQGTCPVC 251
C +CLE+ + G+ +R + CLH+FH NC+DPWL Q TCP+C
Sbjct: 272 CAICLEEFSEGQELRVISCLHEFHRNCVDPWLHQHRTCPLC 312
>sp|Q66HG0|RNF13_RAT E3 ubiquitin-protein ligase RNF13 OS=Rattus norvegicus GN=Rnf13
PE=2 SV=1
Length = 380
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 198 ISVGNLKTEDEL-TCTVCLEQVNVGEIVRSLPCLHQFHANCIDPWL-RQQGTCPVCKLRA 255
+ V K DE C +CLE+ G+ +R LPC H +H C+DPWL + + TCPVCK +
Sbjct: 226 LPVHKFKKGDEYDVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKV 285
>sp|Q8GT74|NIP2_ARATH NEP1-interacting protein 2 OS=Arabidopsis thaliana GN=NIP2 PE=1
SV=1
Length = 241
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
Query: 184 GSSSSPAEKKLETSISVGNLKT---EDELTCTVCLEQVNVGEIVRSLP-CLHQFHANCID 239
G + EK + +I+ GN T E+ +C+VCL+ +GE VRSLP C H FH CID
Sbjct: 167 GLTGDLVEKIPKMTIT-GNNNTDASENTDSCSVCLQDFQLGETVRSLPHCHHMFHLPCID 225
Query: 240 PWLRQQGTCPVCK 252
WL + G+CP+C+
Sbjct: 226 NWLLRHGSCPMCR 238
>sp|O54965|RNF13_MOUSE E3 ubiquitin-protein ligase RNF13 OS=Mus musculus GN=Rnf13 PE=1
SV=2
Length = 381
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 198 ISVGNLKTEDEL-TCTVCLEQVNVGEIVRSLPCLHQFHANCIDPWL-RQQGTCPVCKLRA 255
+ V K DE C +CLE+ G+ +R LPC H +H C+DPWL + + TCPVCK +
Sbjct: 226 LPVHKFKKGDEYDVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKV 285
>sp|Q9DBU5|RNF6_MOUSE E3 ubiquitin-protein ligase RNF6 OS=Mus musculus GN=Rnf6 PE=1 SV=1
Length = 667
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 211 CTVCLEQVNVGEIVRSLPCLHQFHANCIDPWLRQQGTCPVCK 252
C+VC+ G +R LPCLH+FH +CID WL + TCPVC+
Sbjct: 614 CSVCISDYVAGNKLRQLPCLHEFHIHCIDRWLSENCTCPVCR 655
>sp|Q4KLR8|ZNRF3_XENLA E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus laevis GN=znrf3 PE=2
SV=1
Length = 784
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 190 AEKKLETSISVGNLKTEDELT---CTVCLEQVNVGEIVRSLPCLHQFHANCIDPWLRQQG 246
A+ K+ S G L T + C +CLE+ GE +R +PC H+FH C+DPWL Q
Sbjct: 178 AKGKVSREGSCGGLDTLSSSSISDCAICLEKYIDGEELRVIPCTHRFHKRCVDPWLLQNH 237
Query: 247 TCPVCK 252
TCP C+
Sbjct: 238 TCPHCR 243
>sp|Q8AWW4|RN128_XENLA E3 ubiquitin-protein ligase RNF128 OS=Xenopus laevis GN=rnf128 PE=2
SV=2
Length = 404
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 30/46 (65%)
Query: 207 DELTCTVCLEQVNVGEIVRSLPCLHQFHANCIDPWLRQQGTCPVCK 252
D +C VC+E ++VR L C H FH NCIDPWL + TCP+CK
Sbjct: 256 DGDSCAVCIEPYKPSDVVRILTCNHFFHKNCIDPWLLEHRTCPMCK 301
>sp|Q0VD51|RNF13_BOVIN E3 ubiquitin-protein ligase RNF13 OS=Bos taurus GN=RNF13 PE=2 SV=1
Length = 380
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 198 ISVGNLKTEDEL-TCTVCLEQVNVGEIVRSLPCLHQFHANCIDPWL-RQQGTCPVCKLRA 255
+ V K DE C +CL++ G+ +R LPC H +H C+DPWL + + TCPVCK +
Sbjct: 226 LPVHKFKKGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKV 285
>sp|Q91YL2|RN126_MOUSE RING finger protein 126 OS=Mus musculus GN=Rnf126 PE=1 SV=1
Length = 313
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 29/44 (65%)
Query: 209 LTCTVCLEQVNVGEIVRSLPCLHQFHANCIDPWLRQQGTCPVCK 252
L C VC E +GE VR LPC H FH +CI PWL Q +CPVC+
Sbjct: 229 LECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCR 272
>sp|Q90972|RNF13_CHICK E3 ubiquitin-protein ligase RNF13 OS=Gallus gallus GN=RNF13 PE=1
SV=1
Length = 381
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 198 ISVGNLKTEDEL-TCTVCLEQVNVGEIVRSLPCLHQFHANCIDPWL-RQQGTCPVCKLRA 255
+ V K DE C +CL++ G+ +R LPC H +H C+DPWL + + TCPVCK +
Sbjct: 226 LPVHKFKKGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKV 285
>sp|Q5RCV8|RNF13_PONAB E3 ubiquitin-protein ligase RNF13 OS=Pongo abelii GN=RNF13 PE=2
SV=1
Length = 381
Score = 61.2 bits (147), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 198 ISVGNLKTEDEL-TCTVCLEQVNVGEIVRSLPCLHQFHANCIDPWL-RQQGTCPVCKLRA 255
+ V K DE C +CL++ G+ +R LPC H +H C+DPWL + + TCPVCK +
Sbjct: 226 LPVHKFKKGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKV 285
>sp|O43567|RNF13_HUMAN E3 ubiquitin-protein ligase RNF13 OS=Homo sapiens GN=RNF13 PE=1
SV=1
Length = 381
Score = 61.2 bits (147), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 198 ISVGNLKTEDEL-TCTVCLEQVNVGEIVRSLPCLHQFHANCIDPWL-RQQGTCPVCKLRA 255
+ V K DE C +CL++ G+ +R LPC H +H C+DPWL + + TCPVCK +
Sbjct: 226 LPVHKFKKGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKV 285
>sp|Q5SPX3|RN215_MOUSE RING finger protein 215 OS=Mus musculus GN=Rnf215 PE=2 SV=1
Length = 379
Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 30/44 (68%)
Query: 210 TCTVCLEQVNVGEIVRSLPCLHQFHANCIDPWLRQQGTCPVCKL 253
TC VCL+ + +R LPC H+FH +C+DPWL Q TCP+CK
Sbjct: 326 TCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCKF 369
>sp|Q9Y6U7|RN215_HUMAN RING finger protein 215 OS=Homo sapiens GN=RNF215 PE=2 SV=2
Length = 377
Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 30/44 (68%)
Query: 210 TCTVCLEQVNVGEIVRSLPCLHQFHANCIDPWLRQQGTCPVCKL 253
TC VCL+ + +R LPC H+FH +C+DPWL Q TCP+CK
Sbjct: 324 TCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWLMLQQTCPLCKF 367
>sp|Q9Y252|RNF6_HUMAN E3 ubiquitin-protein ligase RNF6 OS=Homo sapiens GN=RNF6 PE=1 SV=1
Length = 685
Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 211 CTVCLEQVNVGEIVRSLPCLHQFHANCIDPWLRQQGTCPVCK 252
C+VC+ G +R LPC+H+FH +CID WL + TCP+C+
Sbjct: 632 CSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICR 673
>sp|Q5SSZ7|ZNRF3_MOUSE E3 ubiquitin-protein ligase ZNRF3 OS=Mus musculus GN=Znrf3 PE=2
SV=1
Length = 913
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 211 CTVCLEQVNVGEIVRSLPCLHQFHANCIDPWLRQQGTCPVCK 252
C +CLE+ GE +R +PC H+FH C+DPWL Q TCP C+
Sbjct: 290 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCR 331
>sp|Q8GT75|NIP1_ARATH NEP1-interacting protein 1 OS=Arabidopsis thaliana GN=NIP1 PE=1
SV=2
Length = 236
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 210 TCTVCLEQVNVGEIVRSLP-CLHQFHANCIDPWLRQQGTCPVCK 252
+C+VCL+ +GE VRSLP C H FH CID WL + G+CP+C+
Sbjct: 190 SCSVCLQDFQLGETVRSLPHCHHMFHLPCIDNWLFRHGSCPMCR 233
>sp|Q9ULT6|ZNRF3_HUMAN E3 ubiquitin-protein ligase ZNRF3 OS=Homo sapiens GN=ZNRF3 PE=1
SV=3
Length = 936
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 211 CTVCLEQVNVGEIVRSLPCLHQFHANCIDPWLRQQGTCPVCK 252
C +CLE+ GE +R +PC H+FH C+DPWL Q TCP C+
Sbjct: 293 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCR 334
>sp|Q0II22|RN126_BOVIN RING finger protein 126 OS=Bos taurus GN=RNF126 PE=2 SV=1
Length = 313
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 28/44 (63%)
Query: 209 LTCTVCLEQVNVGEIVRSLPCLHQFHANCIDPWLRQQGTCPVCK 252
L C VC + +GE VR LPC H FH CI PWL Q +CPVC+
Sbjct: 230 LECPVCKDDYGLGEHVRQLPCNHLFHDGCIVPWLEQHDSCPVCR 273
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.133 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,112,271
Number of Sequences: 539616
Number of extensions: 3519429
Number of successful extensions: 10543
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 327
Number of HSP's successfully gapped in prelim test: 206
Number of HSP's that attempted gapping in prelim test: 10072
Number of HSP's gapped (non-prelim): 577
length of query: 273
length of database: 191,569,459
effective HSP length: 116
effective length of query: 157
effective length of database: 128,974,003
effective search space: 20248918471
effective search space used: 20248918471
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)