Query 024080
Match_columns 272
No_of_seqs 226 out of 1873
Neff 8.0
Searched_HMMs 46136
Date Fri Mar 29 08:48:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024080.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024080hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372 Serine/threonine speci 100.0 1.7E-70 3.7E-75 462.2 18.1 257 6-262 2-258 (303)
2 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 1.3E-63 2.8E-68 444.7 27.1 257 7-263 2-258 (285)
3 cd07420 MPP_RdgC Drosophila me 100.0 1.7E-63 3.7E-68 448.5 28.0 259 3-262 3-296 (321)
4 PTZ00239 serine/threonine prot 100.0 7.7E-63 1.7E-67 442.2 27.5 257 6-262 2-259 (303)
5 KOG0373 Serine/threonine speci 100.0 2.3E-64 4.9E-69 419.3 15.7 257 6-262 5-262 (306)
6 PTZ00480 serine/threonine-prot 100.0 7.9E-62 1.7E-66 437.1 26.5 256 6-262 10-274 (320)
7 PTZ00244 serine/threonine-prot 100.0 3.6E-61 7.9E-66 430.0 26.5 256 7-263 4-268 (294)
8 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 3.2E-61 6.9E-66 430.9 25.1 256 7-263 2-266 (293)
9 cd07416 MPP_PP2B PP2B, metallo 100.0 1E-60 2.2E-65 430.1 28.2 256 6-262 2-271 (305)
10 cd07417 MPP_PP5_C PP5, C-termi 100.0 2E-60 4.4E-65 429.2 25.5 259 4-263 13-277 (316)
11 smart00156 PP2Ac Protein phosp 100.0 1.6E-59 3.4E-64 416.6 26.3 242 20-262 1-243 (271)
12 KOG0374 Serine/threonine speci 100.0 3.4E-60 7.4E-65 427.8 22.2 244 19-262 31-276 (331)
13 cd07418 MPP_PP7 PP7, metalloph 100.0 2.9E-58 6.3E-63 420.4 28.5 269 3-271 8-343 (377)
14 cd07419 MPP_Bsu1_C Arabidopsis 100.0 7.3E-57 1.6E-61 406.6 25.7 245 18-262 19-285 (311)
15 KOG0371 Serine/threonine prote 100.0 2.3E-56 5E-61 378.9 14.5 259 4-262 17-275 (319)
16 KOG0375 Serine-threonine phosp 100.0 4.5E-54 9.7E-59 379.2 15.5 255 7-262 48-316 (517)
17 KOG0377 Protein serine/threoni 100.0 1.1E-46 2.3E-51 339.5 14.6 257 5-262 119-405 (631)
18 KOG0376 Serine-threonine phosp 100.0 3.8E-38 8.3E-43 289.4 10.5 261 3-264 166-432 (476)
19 cd00144 MPP_PPP_family phospho 100.0 4.8E-35 1E-39 252.9 21.2 202 50-262 1-212 (225)
20 PRK13625 bis(5'-nucleosyl)-tet 100.0 7.7E-30 1.7E-34 223.9 17.6 180 47-263 1-214 (245)
21 cd07425 MPP_Shelphs Shewanella 100.0 1.3E-28 2.8E-33 211.0 15.1 177 50-260 1-197 (208)
22 PRK00166 apaH diadenosine tetr 100.0 2.4E-28 5.2E-33 217.0 16.5 207 47-264 1-251 (275)
23 TIGR00668 apaH bis(5'-nucleosy 100.0 1.1E-28 2.5E-33 217.6 13.2 197 47-251 1-213 (279)
24 cd07413 MPP_PA3087 Pseudomonas 100.0 6.8E-28 1.5E-32 208.6 16.8 117 49-168 1-143 (222)
25 PHA02239 putative protein phos 100.0 1.2E-27 2.7E-32 208.2 17.5 177 47-264 1-223 (235)
26 cd07423 MPP_PrpE Bacillus subt 100.0 1.9E-27 4.1E-32 207.5 17.3 123 47-171 1-143 (234)
27 cd07422 MPP_ApaH Escherichia c 100.0 1.5E-27 3.2E-32 209.9 14.2 123 49-175 1-129 (257)
28 cd07421 MPP_Rhilphs Rhilph pho 99.9 5.2E-27 1.1E-31 207.3 16.8 189 47-263 2-282 (304)
29 PRK11439 pphA serine/threonine 99.9 4.9E-27 1.1E-31 202.7 15.6 179 47-263 17-209 (218)
30 cd07424 MPP_PrpA_PrpB PrpA and 99.9 9.9E-25 2.2E-29 186.9 18.2 183 47-262 1-197 (207)
31 PRK09968 serine/threonine-spec 99.9 1.2E-23 2.6E-28 181.6 15.3 116 47-168 15-144 (218)
32 PF00149 Metallophos: Calcineu 99.5 3.6E-13 7.8E-18 107.9 12.7 160 47-241 1-199 (200)
33 cd00841 MPP_YfcE Escherichia c 99.3 5.2E-11 1.1E-15 96.9 12.0 83 48-168 1-86 (155)
34 TIGR00040 yfcE phosphoesterase 99.3 5.7E-11 1.2E-15 97.3 11.8 63 47-118 1-64 (158)
35 PF12850 Metallophos_2: Calcin 99.3 5.8E-11 1.3E-15 96.0 11.4 140 47-263 1-141 (156)
36 cd07397 MPP_DevT Myxococcus xa 99.3 7E-11 1.5E-15 102.7 12.4 156 48-240 2-206 (238)
37 PRK09453 phosphodiesterase; Pr 99.2 2.6E-11 5.7E-16 101.6 7.1 69 47-119 1-77 (182)
38 cd07379 MPP_239FB Homo sapiens 99.2 1.3E-10 2.9E-15 92.6 9.9 119 48-247 1-121 (135)
39 cd00838 MPP_superfamily metall 98.9 1.6E-08 3.5E-13 78.0 11.8 118 50-247 1-120 (131)
40 cd07388 MPP_Tt1561 Thermus the 98.9 3.1E-09 6.8E-14 92.0 7.2 71 47-118 5-75 (224)
41 cd07392 MPP_PAE1087 Pyrobaculu 98.9 1.6E-07 3.5E-12 78.1 16.5 65 49-119 1-66 (188)
42 cd07394 MPP_Vps29 Homo sapiens 98.9 3.8E-08 8.3E-13 82.4 11.8 62 48-118 1-65 (178)
43 PRK05340 UDP-2,3-diacylglucosa 98.8 3.7E-08 7.9E-13 86.3 9.9 71 47-119 1-84 (241)
44 cd07403 MPP_TTHA0053 Thermus t 98.7 3.9E-07 8.5E-12 72.2 11.8 107 50-246 1-107 (129)
45 cd07404 MPP_MS158 Microscilla 98.6 4E-07 8.7E-12 74.8 10.9 67 49-118 1-68 (166)
46 cd07400 MPP_YydB Bacillus subt 98.6 9.4E-07 2E-11 70.7 12.5 117 49-246 1-129 (144)
47 TIGR01854 lipid_A_lpxH UDP-2,3 98.5 5.4E-07 1.2E-11 78.4 9.9 68 49-118 1-81 (231)
48 PRK11340 phosphodiesterase Yae 98.5 2.2E-07 4.8E-12 82.8 6.9 71 46-118 49-125 (271)
49 cd07385 MPP_YkuE_C Bacillus su 98.5 1.9E-07 4.1E-12 80.2 6.0 71 47-119 2-77 (223)
50 cd07396 MPP_Nbla03831 Homo sap 98.5 2.6E-06 5.5E-11 75.7 13.3 72 48-119 2-87 (267)
51 COG0639 ApaH Diadenosine tetra 98.4 4.5E-07 9.7E-12 71.8 5.9 139 121-260 4-151 (155)
52 TIGR03729 acc_ester putative p 98.3 1.4E-06 3.1E-11 76.0 6.6 68 48-118 1-74 (239)
53 cd07383 MPP_Dcr2 Saccharomyces 98.3 1.3E-05 2.8E-10 68.0 12.3 70 47-116 3-87 (199)
54 COG0622 Predicted phosphoester 98.3 8.5E-06 1.8E-10 67.7 10.0 66 47-120 2-67 (172)
55 cd07399 MPP_YvnB Bacillus subt 98.2 8.6E-06 1.9E-10 70.1 9.8 147 48-241 2-160 (214)
56 cd07395 MPP_CSTP1 Homo sapiens 98.2 8.2E-05 1.8E-09 65.6 16.2 71 48-118 6-99 (262)
57 TIGR00619 sbcd exonuclease Sbc 98.2 4.4E-06 9.5E-11 73.8 7.0 72 47-118 1-88 (253)
58 PHA02546 47 endonuclease subun 98.1 9.8E-06 2.1E-10 74.6 6.9 72 47-118 1-89 (340)
59 cd07390 MPP_AQ1575 Aquifex aeo 98.0 1.3E-05 2.9E-10 66.2 7.0 67 49-120 1-84 (168)
60 cd07402 MPP_GpdQ Enterobacter 98.0 1.6E-05 3.4E-10 69.0 7.7 67 48-118 1-83 (240)
61 COG2908 Uncharacterized protei 98.0 1.7E-05 3.8E-10 68.4 7.4 172 50-246 1-203 (237)
62 PRK04036 DNA polymerase II sma 98.0 1.5E-05 3.3E-10 77.1 7.9 72 46-119 243-344 (504)
63 PF06874 FBPase_2: Firmicute f 98.0 7.1E-05 1.5E-09 72.5 11.8 44 72-120 183-226 (640)
64 cd08165 MPP_MPPE1 human MPPE1 98.0 5.4E-05 1.2E-09 61.9 9.7 50 70-119 35-90 (156)
65 cd00840 MPP_Mre11_N Mre11 nucl 98.0 1.6E-05 3.5E-10 67.8 6.8 73 48-120 1-91 (223)
66 PRK11148 cyclic 3',5'-adenosin 98.0 1.9E-05 4E-10 70.5 6.7 71 46-118 14-98 (275)
67 COG2129 Predicted phosphoester 97.9 0.00028 6.2E-09 60.4 13.3 75 46-121 3-80 (226)
68 cd07401 MPP_TMEM62_N Homo sapi 97.9 0.00023 4.9E-09 62.9 12.7 70 49-118 2-89 (256)
69 cd07393 MPP_DR1119 Deinococcus 97.9 3.5E-05 7.6E-10 67.1 6.7 66 49-118 1-84 (232)
70 TIGR00024 SbcD_rel_arch putati 97.8 7.4E-05 1.6E-09 64.9 7.5 69 47-119 15-103 (225)
71 COG1409 Icc Predicted phosphoh 97.8 0.0001 2.2E-09 65.3 8.1 73 47-121 1-81 (301)
72 TIGR00583 mre11 DNA repair pro 97.7 0.00011 2.3E-09 69.2 7.5 74 46-119 3-124 (405)
73 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.7 0.00012 2.6E-09 64.9 7.4 70 49-118 1-86 (262)
74 cd07391 MPP_PF1019 Pyrococcus 97.7 9.3E-05 2E-09 61.3 6.2 57 62-119 30-89 (172)
75 PRK10966 exonuclease subunit S 97.6 0.00013 2.7E-09 68.9 6.7 72 47-119 1-88 (407)
76 cd08163 MPP_Cdc1 Saccharomyces 97.6 0.0052 1.1E-07 54.4 16.5 43 217-261 203-254 (257)
77 cd07398 MPP_YbbF-LpxH Escheric 97.6 0.00017 3.6E-09 61.6 6.5 69 50-119 1-83 (217)
78 COG1408 Predicted phosphohydro 97.5 0.00018 4E-09 64.5 5.9 71 47-119 45-119 (284)
79 cd07386 MPP_DNA_pol_II_small_a 97.5 0.00019 4.1E-09 62.8 5.5 68 50-119 2-95 (243)
80 COG4186 Predicted phosphoester 97.5 0.00039 8.4E-09 56.3 6.6 67 49-119 6-87 (186)
81 cd00839 MPP_PAPs purple acid p 97.4 0.00023 4.9E-09 63.7 4.6 72 47-120 5-83 (294)
82 cd08166 MPP_Cdc1_like_1 unchar 97.2 0.00078 1.7E-08 57.1 6.1 49 70-118 39-93 (195)
83 cd07384 MPP_Cdc1_like Saccharo 97.2 0.0011 2.4E-08 55.1 6.4 51 69-119 41-101 (171)
84 cd00845 MPP_UshA_N_like Escher 97.1 0.00092 2E-08 58.5 6.1 66 48-118 2-82 (252)
85 PF14582 Metallophos_3: Metall 97.0 0.00059 1.3E-08 58.7 3.6 74 46-119 5-103 (255)
86 COG0420 SbcD DNA repair exonuc 96.9 0.0025 5.5E-08 59.6 7.4 73 47-119 1-89 (390)
87 cd07380 MPP_CWF19_N Schizosacc 96.9 0.0024 5.3E-08 51.9 6.3 66 50-116 1-68 (150)
88 PLN02533 probable purple acid 96.5 0.0035 7.5E-08 59.6 5.1 71 46-119 139-212 (427)
89 cd07410 MPP_CpdB_N Escherichia 96.4 0.0045 9.8E-08 55.1 4.9 66 48-118 2-95 (277)
90 PF08321 PPP5: PPP5 TPR repeat 96.4 0.0059 1.3E-07 45.7 4.4 43 3-45 53-95 (95)
91 cd08164 MPP_Ted1 Saccharomyces 96.3 0.013 2.8E-07 49.6 6.5 66 53-118 23-111 (193)
92 COG1768 Predicted phosphohydro 96.0 0.013 2.9E-07 48.7 5.0 45 72-120 42-88 (230)
93 cd07408 MPP_SA0022_N Staphyloc 95.8 0.018 3.9E-07 50.8 5.6 66 48-118 2-82 (257)
94 COG1407 Predicted ICC-like pho 95.7 0.032 6.8E-07 48.5 6.5 104 45-172 18-143 (235)
95 cd07378 MPP_ACP5 Homo sapiens 95.6 0.027 5.8E-07 49.9 5.9 69 48-118 2-83 (277)
96 cd07412 MPP_YhcR_N Bacillus su 95.5 0.021 4.6E-07 51.3 4.9 66 48-118 2-88 (288)
97 KOG0376 Serine-threonine phosp 95.5 0.0053 1.1E-07 58.0 1.1 114 19-134 14-132 (476)
98 KOG3325 Membrane coat complex 95.1 0.23 4.9E-06 40.1 9.0 61 49-118 3-66 (183)
99 cd07411 MPP_SoxB_N Thermus the 94.9 0.051 1.1E-06 48.1 5.4 65 48-118 2-95 (264)
100 KOG2863 RNA lariat debranching 94.7 0.088 1.9E-06 48.3 6.5 74 47-120 1-90 (456)
101 cd07409 MPP_CD73_N CD73 ecto-5 94.4 0.1 2.3E-06 46.6 6.3 66 48-118 2-94 (281)
102 cd00842 MPP_ASMase acid sphing 94.4 0.091 2E-06 47.1 5.9 72 49-120 40-124 (296)
103 COG1311 HYS2 Archaeal DNA poly 94.2 1.4 3.1E-05 42.0 13.6 191 48-266 227-453 (481)
104 KOG3662 Cell division control 94.1 0.13 2.7E-06 48.3 6.2 47 72-118 92-144 (410)
105 PRK09419 bifunctional 2',3'-cy 93.6 0.092 2E-06 56.1 4.9 67 47-118 661-736 (1163)
106 cd07406 MPP_CG11883_N Drosophi 93.5 0.15 3.3E-06 44.9 5.5 64 49-117 3-82 (257)
107 TIGR00282 metallophosphoestera 93.4 0.21 4.5E-06 44.5 6.2 67 47-118 1-71 (266)
108 KOG1432 Predicted DNA repair e 93.0 0.31 6.8E-06 44.5 6.6 71 48-119 55-148 (379)
109 PTZ00422 glideosome-associated 92.3 0.87 1.9E-05 42.8 8.9 73 46-118 26-109 (394)
110 cd07405 MPP_UshA_N Escherichia 91.2 0.32 7E-06 43.6 4.6 66 48-118 2-87 (285)
111 PF04042 DNA_pol_E_B: DNA poly 90.7 0.6 1.3E-05 39.5 5.7 72 49-120 1-93 (209)
112 KOG1378 Purple acid phosphatas 90.3 0.53 1.1E-05 44.7 5.3 34 220-253 322-355 (452)
113 cd07382 MPP_DR1281 Deinococcus 89.0 1.1 2.3E-05 39.7 6.1 66 48-118 1-70 (255)
114 COG3855 Fbp Uncharacterized pr 88.7 0.31 6.7E-06 46.2 2.4 42 74-120 191-232 (648)
115 COG3855 Fbp Uncharacterized pr 88.6 2.7 5.8E-05 40.1 8.4 39 218-256 514-559 (648)
116 COG0737 UshA 5'-nucleotidase/2 88.6 0.63 1.4E-05 45.3 4.7 69 46-119 26-116 (517)
117 cd08162 MPP_PhoA_N Synechococc 88.4 0.82 1.8E-05 41.6 5.0 66 48-118 2-91 (313)
118 KOG2476 Uncharacterized conser 88.2 1.2 2.5E-05 42.4 5.9 69 46-115 5-75 (528)
119 cd07407 MPP_YHR202W_N Saccharo 87.7 0.77 1.7E-05 41.2 4.4 66 48-118 7-97 (282)
120 PRK09419 bifunctional 2',3'-cy 86.2 0.98 2.1E-05 48.4 4.8 67 47-118 42-139 (1163)
121 PRK09420 cpdB bifunctional 2', 86.0 1.2 2.5E-05 44.8 4.9 69 45-118 24-122 (649)
122 TIGR01390 CycNucDiestase 2',3' 85.8 1.1 2.5E-05 44.7 4.8 66 48-118 4-99 (626)
123 PTZ00235 DNA polymerase epsilo 83.7 3.5 7.6E-05 37.1 6.4 73 47-119 28-123 (291)
124 PRK11907 bifunctional 2',3'-cy 80.5 2.6 5.5E-05 43.4 4.9 67 47-118 116-213 (814)
125 cd07387 MPP_PolD2_C PolD2 (DNA 80.2 7.1 0.00015 34.6 7.1 47 75-121 44-110 (257)
126 TIGR01530 nadN NAD pyrophospha 79.4 3.6 7.8E-05 40.5 5.4 65 49-118 3-94 (550)
127 PRK09558 ushA bifunctional UDP 78.6 2.7 5.9E-05 41.3 4.3 68 46-118 34-121 (551)
128 KOG2679 Purple (tartrate-resis 73.7 3.8 8.2E-05 36.6 3.4 68 47-118 44-126 (336)
129 PF02875 Mur_ligase_C: Mur lig 72.0 10 0.00022 27.3 5.0 68 47-114 12-81 (91)
130 PRK09418 bifunctional 2',3'-cy 70.9 6 0.00013 40.6 4.6 68 46-118 39-142 (780)
131 KOG2310 DNA repair exonuclease 70.5 15 0.00032 35.9 6.8 56 46-101 13-80 (646)
132 KOG3339 Predicted glycosyltran 68.8 71 0.0015 27.0 10.0 85 75-165 40-140 (211)
133 KOG3947 Phosphoesterases [Gene 60.5 12 0.00027 33.4 3.9 64 47-120 62-128 (305)
134 PF12641 Flavodoxin_3: Flavodo 60.4 54 0.0012 26.8 7.5 58 50-110 2-72 (160)
135 PF06874 FBPase_2: Firmicute f 57.7 9.6 0.00021 37.8 3.0 40 218-257 507-553 (640)
136 KOG3770 Acid sphingomyelinase 52.9 35 0.00075 33.7 5.9 62 61-122 196-267 (577)
137 PRK10773 murF UDP-N-acetylmura 52.1 64 0.0014 30.7 7.7 67 46-113 324-392 (453)
138 PF13258 DUF4049: Domain of un 51.4 56 0.0012 28.7 6.4 87 75-169 86-186 (318)
139 TIGR00282 metallophosphoestera 46.3 17 0.00036 32.4 2.5 39 76-118 2-41 (266)
140 PF12085 DUF3562: Protein of u 44.3 54 0.0012 22.7 4.2 42 2-43 1-42 (66)
141 cd07382 MPP_DR1281 Deinococcus 43.7 23 0.00049 31.3 3.0 40 76-118 1-40 (255)
142 COG2204 AtoC Response regulato 40.5 97 0.0021 30.0 6.8 83 1-83 82-173 (464)
143 COG1692 Calcineurin-like phosp 36.9 55 0.0012 28.9 4.2 67 47-118 1-71 (266)
144 KOG3425 Uncharacterized conser 36.0 1.6E+02 0.0035 23.1 6.1 60 59-118 12-79 (128)
145 PLN02965 Probable pheophorbida 33.2 2.1E+02 0.0045 24.3 7.4 21 220-240 59-81 (255)
146 TIGR01143 murF UDP-N-acetylmur 33.1 2.2E+02 0.0049 26.6 8.1 71 46-116 295-366 (417)
147 COG4320 Uncharacterized protei 32.8 25 0.00055 32.2 1.5 58 36-102 46-108 (410)
148 PRK11929 putative bifunctional 32.4 2.3E+02 0.005 29.8 8.8 72 46-117 833-906 (958)
149 PF06490 FleQ: Flagellar regul 32.2 97 0.0021 23.3 4.5 64 48-118 1-81 (109)
150 TIGR01143 murF UDP-N-acetylmur 32.1 1.9E+02 0.004 27.1 7.4 68 47-119 325-410 (417)
151 KOG0966 ATP-dependent DNA liga 32.1 27 0.00058 35.7 1.7 86 20-108 394-480 (881)
152 PF06861 BALF1: BALF1 protein; 31.6 66 0.0014 26.6 3.6 81 21-119 54-134 (182)
153 TIGR01428 HAD_type_II 2-haloal 30.6 3E+02 0.0064 22.4 8.9 67 47-116 109-175 (198)
154 PRK14093 UDP-N-acetylmuramoyla 27.8 2.2E+02 0.0049 27.3 7.3 66 47-113 337-408 (479)
155 PRK12359 flavodoxin FldB; Prov 27.3 70 0.0015 26.4 3.2 55 46-100 52-107 (172)
156 PF09949 DUF2183: Uncharacteri 25.8 2.5E+02 0.0054 20.9 5.7 42 64-111 54-95 (100)
157 COG3207 DIT1 Pyoverdine/dityro 25.8 1.1E+02 0.0024 27.4 4.2 42 42-83 101-156 (330)
158 KOG3040 Predicted sugar phosph 25.6 4.2E+02 0.0091 23.1 7.5 37 4-40 50-87 (262)
159 KOG1602 Cis-prenyltransferase 25.6 1.1E+02 0.0023 27.2 4.1 49 21-69 97-149 (271)
160 COG0634 Hpt Hypoxanthine-guani 25.6 4E+02 0.0087 22.3 9.0 77 18-98 10-117 (178)
161 COG3365 Uncharacterized protei 25.2 1.1E+02 0.0024 23.4 3.5 40 1-40 17-62 (118)
162 TIGR00550 nadA quinolinate syn 25.1 1.5E+02 0.0033 27.0 5.2 36 46-84 28-63 (310)
163 TIGR00006 S-adenosyl-methyltra 24.8 86 0.0019 28.5 3.5 46 27-81 55-101 (305)
164 PF02885 Glycos_trans_3N: Glyc 24.2 1.2E+02 0.0026 20.5 3.4 27 7-33 2-28 (66)
165 COG0770 MurF UDP-N-acetylmuram 24.0 4.9E+02 0.011 25.1 8.6 74 46-120 325-400 (451)
166 PF09846 DUF2073: Uncharacteri 23.8 98 0.0021 23.4 3.0 37 1-37 4-46 (104)
167 PRK15455 PrkA family serine pr 23.5 7.8E+02 0.017 24.9 9.9 67 48-119 71-149 (644)
168 cd07381 MPP_CapA CapA and rela 23.3 1.6E+02 0.0035 25.2 4.9 30 224-254 201-230 (239)
169 PF02609 Exonuc_VII_S: Exonucl 23.0 2E+02 0.0044 18.5 4.2 36 5-41 6-41 (53)
170 TIGR03729 acc_ester putative p 22.2 1.7E+02 0.0037 25.0 4.8 29 216-244 195-223 (239)
171 PRK11475 DNA-binding transcrip 21.8 1.8E+02 0.0038 24.6 4.8 51 63-118 27-81 (207)
172 smart00411 BHL bacterial (prok 21.6 1.6E+02 0.0035 20.8 3.9 31 7-37 3-33 (90)
173 TIGR00024 SbcD_rel_arch putati 21.5 2.7E+02 0.0058 23.9 5.8 62 16-86 34-101 (225)
No 1
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-70 Score=462.18 Aligned_cols=257 Identities=70% Similarity=1.231 Sum_probs=253.2
Q ss_pred hHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhccCcceecCCCceeeeCCCCCHHHHHHHHHHcCCCCCCeEEEecCccC
Q 024080 6 DLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVD 85 (272)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~e~~~~~~~~~i~viGDIHG~~~~l~~~l~~~~~~~~~~~vflGD~vD 85 (272)
++++.|+++++.+.+++.++..||.+++++|.+|+++.+++.|+.|+|||||++.+|..+++..|.++..+++|||||||
T Consensus 2 dldr~ie~L~~~~li~E~eV~~LC~~~~eiL~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t~YLFLGDyVD 81 (303)
T KOG0372|consen 2 DLDRQIEQLRRCELIAESEVKALCAKVREILVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDVPETNYLFLGDYVD 81 (303)
T ss_pred cHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCCCCCceEeecchhc
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHhhHhcCCcEEEEccCcchhhhhhhhCChHHHHHHhCChhHHHHHHHHhhccCceEEEcCcEEEecC
Q 024080 86 RGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQIFCLHG 165 (272)
Q Consensus 86 rG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~l~vHa 165 (272)
||.+|+|++.+|+.||.+||+++.+||||||.+.+...|||++||.++||+..+|..+.+.|+.||++|++++++|||||
T Consensus 82 RG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~~vWr~c~eiFdyL~l~aiid~kifCVHG 161 (303)
T KOG0372|consen 82 RGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSANVWRYCTEIFDYLSLAAIIDGKIFCVHG 161 (303)
T ss_pred cccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCChHHHHHHHHHHHhhhHhheecCcEEEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcHHHHhhccccccCCCCCccccccccCCCCCCCCccCCCCCccccCHHHHHHHHHHcCCcEEEEcCCCCccCe
Q 024080 166 GLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGY 245 (272)
Q Consensus 166 Gi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~~~~~~~~~~g~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~ 245 (272)
|++|++..++||+.+.|..++|..++++|++||||.+..+|..+|||.|+.||.+++++|++.||+.+|+|+||.+.+||
T Consensus 162 GlSP~i~~lDqIr~lDR~~Eiph~g~m~DllWSDPee~~g~~~SPRGaGylFG~dvv~~F~~~N~~~~I~RaHQLv~eGy 241 (303)
T KOG0372|consen 162 GLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLWSDPEEGPGWGLSPRGAGYLFGEDVVESFLEANGLSLICRAHQLVMEGY 241 (303)
T ss_pred CCCcchhhHHHHHHhhccccCCCCCcchheeccCcccCCCcccCCCCccccccHHHHHHHHHhCChHHHHHHHHHHHhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEeCCCeEEEEeccccc
Q 024080 246 NWCQVWNLKDHASFCFF 262 (272)
Q Consensus 246 ~~~~~~~li~i~s~~~~ 262 (272)
.+.|+++++|+||++=|
T Consensus 242 k~~F~~~v~TVWSAPNY 258 (303)
T KOG0372|consen 242 KWHFDEKVVTVWSAPNY 258 (303)
T ss_pred HHhcCCceEEEecCCch
Confidence 99999999999999755
No 2
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=1.3e-63 Score=444.65 Aligned_cols=257 Identities=76% Similarity=1.305 Sum_probs=248.4
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhccCcceecCCCceeeeCCCCCHHHHHHHHHHcCCCCCCeEEEecCccCC
Q 024080 7 LDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDR 86 (272)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~e~~~~~~~~~i~viGDIHG~~~~l~~~l~~~~~~~~~~~vflGD~vDr 86 (272)
++++++++.++..++++++.+||++|++++++||++++++.+++||||||||+.+|.++|+..+.++.+++|||||||||
T Consensus 2 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~lfLGDyVDR 81 (285)
T cd07415 2 LDKWIEQLKKCELLPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELFRVGGDPPDTNYLFLGDYVDR 81 (285)
T ss_pred HHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCEEecCCCEEEEEeCCCCHHHHHHHHHHcCCCCCCeEEEEeEECCC
Confidence 78899999999999999999999999999999999999999999999999999999999999999889999999999999
Q ss_pred CCCcHHHHHHHHHhhHhcCCcEEEEccCcchhhhhhhhCChHHHHHHhCChhHHHHHHHHhhccCceEEEcCcEEEecCC
Q 024080 87 GYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQIFCLHGG 166 (272)
Q Consensus 87 G~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~l~vHaG 166 (272)
|++|+|++.+++++|..+|.+++++|||||.+.++..+||..|+..+|+...+|..+.++|++||++++++++++|||||
T Consensus 82 G~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~~~l~~~~~~~f~~lPlaaii~~~i~cvHgG 161 (285)
T cd07415 82 GYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGNANVWKYCTDLFDYLPLAALIDNQIFCVHGG 161 (285)
T ss_pred CcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCchHHHHHHHHHHHHhHHHhEeCCeEEEEcCC
Confidence 99999999999999999999999999999999999999999999999987789999999999999999999999999999
Q ss_pred CCCCCCcHHHHhhccccccCCCCCccccccccCCCCCCCCccCCCCCccccCHHHHHHHHHHcCCcEEEEcCCCCccCee
Q 024080 167 LSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYN 246 (272)
Q Consensus 167 i~p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~~~~~~~~~~g~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~ 246 (272)
++|....+++++.++|+.+.+..+.+.|++||||.+..+|.+++||.|+.||++++++||+++++++||||||++++||+
T Consensus 162 i~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~ 241 (285)
T cd07415 162 LSPSIDTLDQIRAIDRFQEVPHEGPMCDLLWSDPDDIEGWGISPRGAGYLFGQDVVEEFNHNNGLTLICRAHQLVMEGYQ 241 (285)
T ss_pred CCCCcccHHHhhcccCCCCCCCCCCccceEecCCCccCCCCcCCCCCccccCHHHHHHHHHHCCCeEEEEcCccccceEE
Confidence 99999999999999999999989999999999999888999999999999999999999999999999999999999999
Q ss_pred EeCCCeEEEEecccccc
Q 024080 247 WCQVWNLKDHASFCFFS 263 (272)
Q Consensus 247 ~~~~~~li~i~s~~~~~ 263 (272)
+.++++++|+||++-|.
T Consensus 242 ~~~~~~~~TvfSa~~y~ 258 (285)
T cd07415 242 WMFDDKLVTVWSAPNYC 258 (285)
T ss_pred EecCCcEEEEecCCccc
Confidence 99999999999987663
No 3
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=1.7e-63 Score=448.47 Aligned_cols=259 Identities=34% Similarity=0.595 Sum_probs=236.5
Q ss_pred CcchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhccCcceecCC----CceeeeCCCCCHHHHHHHHHHcCCCC-CCeE
Q 024080 3 SHGDLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVKC----PVTVCGDIHGQFYDLIELFRIGGNAP-DTNY 77 (272)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~e~~~~~~~~----~i~viGDIHG~~~~l~~~l~~~~~~~-~~~~ 77 (272)
|.+.++++|+++.+++.++++++.+||++|++++++||++++++. |++|||||||++.+|.++++..+.++ .+++
T Consensus 3 ~~~~~~~~i~~~~~~~~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~g~~~~~~~~ 82 (321)
T cd07420 3 TKDHIDALIEAFKEKQLLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNGLPSPENPY 82 (321)
T ss_pred CHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHcCCCCccceE
Confidence 456799999999999999999999999999999999999999875 89999999999999999999999875 4689
Q ss_pred EEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccCcchhhhhhhhCChHHHHHHhCC--hhHHHHHHHHhhccCceEE
Q 024080 78 LFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGN--ANVWKYFTDLFDYLPLTAL 155 (272)
Q Consensus 78 vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~g~~~e~~~~~~~--~~~~~~~~~~~~~lPl~~~ 155 (272)
||||||||||++|+||+.+|++||..+|+++++||||||.+.++..+||..|+..+|+. ..+|..+.++|++||++|+
T Consensus 83 lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~~~~F~~LPlaai 162 (321)
T cd07420 83 VFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLLEDVFSWLPLATI 162 (321)
T ss_pred EEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHHHHHHHhCCceEE
Confidence 99999999999999999999999999999999999999999999999999999999984 6799999999999999999
Q ss_pred EcCcEEEecCCCCCCCCcHHHHhhcccccc-----CCC----------------------CCccccccccCCCCCCC-Cc
Q 024080 156 IESQIFCLHGGLSPSLDTLDNIRALDRIQE-----VPH----------------------EGPMCDLLWSDPDDRCG-WG 207 (272)
Q Consensus 156 ~~~~~l~vHaGi~p~~~~~~~i~~i~r~~~-----~~~----------------------~~~~~~llW~dp~~~~~-~~ 207 (272)
++++++||||||+| ...+++++.++|+.. .|. ...+.|+|||||.+..+ |.
T Consensus 163 i~~~i~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlLWSDP~~~~~~~~ 241 (321)
T cd07420 163 IDNKILVVHGGISD-STDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILDILWSDPKAQKGCKP 241 (321)
T ss_pred EcCCEEEEeCCCCC-ccCHHHHHhhhccccccccCCCccccccccccccccccccccccccchhheeeecCCccCCCCCc
Confidence 99999999999987 457889998887421 111 03567999999987544 67
Q ss_pred cCCCCCccccCHHHHHHHHHHcCCcEEEEcCCCCccCeeEeCCCeEEEEeccccc
Q 024080 208 ISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQVWNLKDHASFCFF 262 (272)
Q Consensus 208 ~~~~g~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~li~i~s~~~~ 262 (272)
+++||.|+.||++++++||+++++++||||||++++||++.++++++|+||++-|
T Consensus 242 ~~~RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~~~~~~~iTvFSa~nY 296 (321)
T cd07420 242 NTFRGGGCYFGPDVTSKVLQKHGLSLLIRSHECKPEGYEFCHNNKVITIFSASNY 296 (321)
T ss_pred cCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhhcceEEecCCeEEEEecCCcc
Confidence 7789999999999999999999999999999999999999999999999999877
No 4
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=7.7e-63 Score=442.20 Aligned_cols=257 Identities=58% Similarity=1.057 Sum_probs=246.8
Q ss_pred hHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhccCcceecCCCceeeeCCCCCHHHHHHHHHHcCCCCCCeEEEecCccC
Q 024080 6 DLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVD 85 (272)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~e~~~~~~~~~i~viGDIHG~~~~l~~~l~~~~~~~~~~~vflGD~vD 85 (272)
+++++++.+.++..++++++.+||++|++++++||++++++.+++|+||||||+.+|.++++..+..+.++++|||||||
T Consensus 2 ~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVD 81 (303)
T PTZ00239 2 DIDRHIATLLNGGCLPERDLKLICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKEGGDIPNANYIFIGDFVD 81 (303)
T ss_pred CHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEeeeEcC
Confidence 38899999999999999999999999999999999999999999999999999999999999999888999999999999
Q ss_pred CCCCcHHHHHHHHHhhHhcCCcEEEEccCcchhhhhhhhCChHHHHHHhCChhHHHHHHHHhhccCceEEEcCcEEEecC
Q 024080 86 RGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQIFCLHG 165 (272)
Q Consensus 86 rG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~l~vHa 165 (272)
||++|+|++.+++++|..+|.+++++|||||.+.++..+||..|+..+|+...+|..+.++|++||++++++++++||||
T Consensus 82 RG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~~~~~~~~~~f~~LPlaaii~~~i~cvHg 161 (303)
T PTZ00239 82 RGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSNPWRLFMDVFDCLPLAALIEGQILCVHG 161 (303)
T ss_pred CCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcChhHHHHHHHHHHhCchheEEcCeEEEEcC
Confidence 99999999999999999999999999999999999999999999999998778899999999999999999999999999
Q ss_pred CCCCCCCcHHHHhhccccccCCCCCccccccccCCCCCCCCccCCCCCccccCHHHHHHHHHHcCCcEEEEcCCCCccCe
Q 024080 166 GLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGY 245 (272)
Q Consensus 166 Gi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~~~~~~~~~~g~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~ 245 (272)
|++|....+++++.++|+.+.|..+++.|++||||.+..+|.+++||.|+.||++++++||+++++++||||||++++||
T Consensus 162 Gi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~ 241 (303)
T PTZ00239 162 GLSPDMRTIDQIRTIDRKIEIPHEGPFCDLMWSDPEEVEYWAVNSRGAGYLFGAKVTKEFCRLNDLTLICRAHQLVMEGY 241 (303)
T ss_pred ccCcccccHhhhccccCCCCCCCCCCceeeEecCccccCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhccce
Confidence 99999999999999999999999999999999999988899999999999999999999999999999999999999999
Q ss_pred eEeCCCe-EEEEeccccc
Q 024080 246 NWCQVWN-LKDHASFCFF 262 (272)
Q Consensus 246 ~~~~~~~-li~i~s~~~~ 262 (272)
+++++++ ++|+||+.-|
T Consensus 242 ~~~~~~~~~iTvfSa~~Y 259 (303)
T PTZ00239 242 KYWFPDQNLVTVWSAPNY 259 (303)
T ss_pred EEEeCCCeEEEEECCCcc
Confidence 9887665 9999998766
No 5
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-64 Score=419.25 Aligned_cols=257 Identities=63% Similarity=1.135 Sum_probs=252.9
Q ss_pred hHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhccCcceecCCCceeeeCCCCCHHHHHHHHHHcCCCCCCeEEEecCccC
Q 024080 6 DLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVD 85 (272)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~e~~~~~~~~~i~viGDIHG~~~~l~~~l~~~~~~~~~~~vflGD~vD 85 (272)
+++++|+.+++++.+++++++.||+.++++|..|.++.+++.|+.|+|||||++.+|..+++..|..|+..+||+||+||
T Consensus 5 d~d~wi~~vk~ckyLpE~elk~LCe~v~d~L~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~vP~tnYiFmGDfVD 84 (306)
T KOG0373|consen 5 DLDQWIETVKKCKYLPENELKRLCEMVKDILMEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQVPDTNYIFMGDFVD 84 (306)
T ss_pred CHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhhcCccccCCCeeEeeccchhHHHHHHHHHhcCCCCCcceEEeccccc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHhhHhcCCcEEEEccCcchhhhhhhhCChHHHHHHhCChhHHHHHHHHhhccCceEEEcCcEEEecC
Q 024080 86 RGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQIFCLHG 165 (272)
Q Consensus 86 rG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~l~vHa 165 (272)
||..|+|++.+++.||.+||.++.+||||||.+.+...|||++||..+||....|+.+.+.|+.|+++|+++++++||||
T Consensus 85 RGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGnan~wkycckVFD~LtlaAiID~~vLCVHG 164 (306)
T KOG0373|consen 85 RGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNANVWKYCCKVFDFLTLAAIIDEKVLCVHG 164 (306)
T ss_pred cccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCchHHHHHHHHHhhhhHHHHhcCcEEEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcHHHHhhccccccCCCCCccccccccCCCCCCCCccCCCCCccccCHHHHHHHHHHcCCcEEEEcCCCCccCe
Q 024080 166 GLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGY 245 (272)
Q Consensus 166 Gi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~~~~~~~~~~g~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~ 245 (272)
|++|+...++||+.+.|-+++|..++++|++||||++.+.|..++||.|+.||++.+.+|...|++++|.|+||.+.+||
T Consensus 165 GLSPdirtlDqir~i~R~qEiPh~G~fcDlmWSDPedve~W~vSpRGAGwlFGskVt~eF~~iN~L~LicRaHQLV~EG~ 244 (306)
T KOG0373|consen 165 GLSPDIRTLDQIRLIERNQEIPHEGPFCDLMWSDPEDVETWAVSPRGAGWLFGSKVTTEFNHINNLNLICRAHQLVQEGF 244 (306)
T ss_pred CCCccceeHHHHHhHHhhccCCCCCCccceeccChhhhhhheeCCCCcceeechhhhHHHHhccchHHHHhHHHHHHhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEeCCCe-EEEEeccccc
Q 024080 246 NWCQVWN-LKDHASFCFF 262 (272)
Q Consensus 246 ~~~~~~~-li~i~s~~~~ 262 (272)
...|++| ++|+||++-|
T Consensus 245 KymF~eK~lvTVWSAPNY 262 (306)
T KOG0373|consen 245 KYMFDEKGLVTVWSAPNY 262 (306)
T ss_pred HhccCCCCEEEEecCCch
Confidence 9999998 9999998765
No 6
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=7.9e-62 Score=437.08 Aligned_cols=256 Identities=47% Similarity=0.923 Sum_probs=244.6
Q ss_pred hHHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhccCcceecCCCceeeeCCCCCHHHHHHHHHHcCCCCCCeE
Q 024080 6 DLDRQIEHLMECK--------PLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNY 77 (272)
Q Consensus 6 ~~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~l~~e~~~~~~~~~i~viGDIHG~~~~l~~~l~~~~~~~~~~~ 77 (272)
+++++|+++.+.. .++++++.+||+++++++++||++++++.+++|||||||++.+|.++++..++++.+++
T Consensus 10 ~~~~~i~~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~~~g~~~~~~y 89 (320)
T PTZ00480 10 DVDNIIERLLSVRGSKPGKNVNLTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQYFDLLRLFEYGGYPPESNY 89 (320)
T ss_pred CHHHHHHHHHhccccCccccCCCCHHHHHHHHHHHHHHHHhCCceEecCCCeEEEeecccCHHHHHHHHHhcCCCCcceE
Confidence 3888999998654 58999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccCcchhhhhhhhCChHHHHHHhCChhHHHHHHHHhhccCceEEEc
Q 024080 78 LFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIE 157 (272)
Q Consensus 78 vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~lPl~~~~~ 157 (272)
||||||||||++|+|++.+++++|..+|.++++||||||...++..+||..|+..+|+ ..+|..+.+.|+.||++|+++
T Consensus 90 lfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~-~~l~~~~~~~F~~LPlaAiI~ 168 (320)
T PTZ00480 90 LFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYT-IKLWKTFTDCFNCLPVAALID 168 (320)
T ss_pred EEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcC-HHHHHHHHHHHHhccHhheec
Confidence 9999999999999999999999999999999999999999999999999999999995 679999999999999999999
Q ss_pred CcEEEecCCCCCCCCcHHHHhhccccccCCCCCccccccccCCCC-CCCCccCCCCCccccCHHHHHHHHHHcCCcEEEE
Q 024080 158 SQIFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDIASQFNHTNGLSLISR 236 (272)
Q Consensus 158 ~~~l~vHaGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~-~~~~~~~~~g~~~~fg~~~~~~fl~~~~~~~iir 236 (272)
++++||||||+|....+++++.+.|+.+.|..+.+.+++||||.. ..+|.+++||.|++||++++++||+++++++|||
T Consensus 169 ~~i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n~l~~IiR 248 (320)
T PTZ00480 169 EKILCMHGGLSPELSNLEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFLKKHELDLICR 248 (320)
T ss_pred CcEEEEcCCcCcccCCHHHHhcccCCCCCCccchhhheeecCcccccCCCccCCCCCccccCHHHHHHHHHhCCCcEEEE
Confidence 999999999999999999999999999999999999999999985 6789999999999999999999999999999999
Q ss_pred cCCCCccCeeEeCCCeEEEEeccccc
Q 024080 237 AHQLVMEGYNWCQVWNLKDHASFCFF 262 (272)
Q Consensus 237 gH~~~~~G~~~~~~~~li~i~s~~~~ 262 (272)
|||++++||++.++++++|+||++-|
T Consensus 249 ~Hq~v~~G~~~~~~~~~iTvFSa~~Y 274 (320)
T PTZ00480 249 AHQVVEDGYEFFSKRQLVTLFSAPNY 274 (320)
T ss_pred cCccccCceEEeCCCcEEEEeCCccc
Confidence 99999999999999999999998777
No 7
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=3.6e-61 Score=430.05 Aligned_cols=256 Identities=40% Similarity=0.783 Sum_probs=241.3
Q ss_pred HHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhccCcceecCCCceeeeCCCCCHHHHHHHHHHcCCCCCCeEE
Q 024080 7 LDRQIEHLMECK--------PLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYL 78 (272)
Q Consensus 7 ~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~l~~e~~~~~~~~~i~viGDIHG~~~~l~~~l~~~~~~~~~~~v 78 (272)
++++|+++.+.. .++.+++.+||+++++++++||++++++.+++||||||||+.+|.++++.++.++.++++
T Consensus 4 ~~~~i~~~~~~~~~~~~~~~~i~~~~i~~l~~~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~~~~l 83 (294)
T PTZ00244 4 VQTLIEKMLTVKGNRTQRQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPYSNYL 83 (294)
T ss_pred HHHHHHHHHhcccCCCccccCCCHHHHHHHHHHHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCCCcccEE
Confidence 566777776543 688999999999999999999999999999999999999999999999999998888999
Q ss_pred EecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccCcchhhhhhhhCChHHHHHHhCChhHHHHHHHHhhccCceEEEcC
Q 024080 79 FMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIES 158 (272)
Q Consensus 79 flGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~lPl~~~~~~ 158 (272)
|||||||||++|.||+.+++.+|..+|.+++++|||||.+.++..+||..++..+|+ ..+|+.+.++|+.||+++++++
T Consensus 84 fLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~-~~l~~~~~~~f~~lPlaaii~~ 162 (294)
T PTZ00244 84 FLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYN-IKLFKAFTDVFNTMPVCCVISE 162 (294)
T ss_pred EeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhh-HHHHHHHHHHHHhCchheEecC
Confidence 999999999999999999999999999999999999999999999999999999995 6789999999999999999999
Q ss_pred cEEEecCCCCCCCCcHHHHhhccccccCCCCCccccccccCCCC-CCCCccCCCCCccccCHHHHHHHHHHcCCcEEEEc
Q 024080 159 QIFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRA 237 (272)
Q Consensus 159 ~~l~vHaGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~-~~~~~~~~~g~~~~fg~~~~~~fl~~~~~~~iirg 237 (272)
+++|||||++|.+..+++++.++|+.+.+..+.+.|++||||.+ ..+|.+++||.|+.||++++++||+++++++||||
T Consensus 163 ~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~ 242 (294)
T PTZ00244 163 KIICMHGGLSPDLTSLASVNEIERPCDVPDRGILCDLLWADPEDEVRGFLESDRGVSYLFGEDIVNDFLDMVDMDLIVRA 242 (294)
T ss_pred eeEEEcCCCCchhhHHHHhhhhccccCCCccchhheeeecCcccccCCCCcCCCCCccccCHHHHHHHHHHcCCcEEEEc
Confidence 99999999999999999999999999988888999999999985 67899999999999999999999999999999999
Q ss_pred CCCCccCeeEeCCCeEEEEecccccc
Q 024080 238 HQLVMEGYNWCQVWNLKDHASFCFFS 263 (272)
Q Consensus 238 H~~~~~G~~~~~~~~li~i~s~~~~~ 263 (272)
||++++||++.++++++|+||++-|.
T Consensus 243 Hq~~~~G~~~~~~~~~iTvfSa~~Y~ 268 (294)
T PTZ00244 243 HQVMERGYGFFASRQLVTVFSAPNYC 268 (294)
T ss_pred CccccCceEEcCCCeEEEEeCCcccc
Confidence 99999999999999999999997763
No 8
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=3.2e-61 Score=430.86 Aligned_cols=256 Identities=47% Similarity=0.955 Sum_probs=242.8
Q ss_pred HHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhccCcceecCCCceeeeCCCCCHHHHHHHHHHcCCCCCCeEE
Q 024080 7 LDRQIEHLMECK--------PLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYL 78 (272)
Q Consensus 7 ~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~l~~e~~~~~~~~~i~viGDIHG~~~~l~~~l~~~~~~~~~~~v 78 (272)
++++|+++.+.. .++++++.+||+++++++++||++++++.+++||||||||+.+|.++++..+.++.+++|
T Consensus 2 ~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~~~l 81 (293)
T cd07414 2 IDSIIERLLEVRGSRPGKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 81 (293)
T ss_pred HHHHHHHHHhccccCCcccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCCCcceEE
Confidence 677888887654 689999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccCcchhhhhhhhCChHHHHHHhCChhHHHHHHHHhhccCceEEEcC
Q 024080 79 FMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIES 158 (272)
Q Consensus 79 flGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~lPl~~~~~~ 158 (272)
|||||||||++|+|++.+++++|..+|.++++||||||.+.++..+||..++..+|+ ..+|..+.++|++||+++++++
T Consensus 82 fLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~-~~l~~~~~~~f~~lPlaa~i~~ 160 (293)
T cd07414 82 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN-IKLWKTFTDCFNCLPVAAIIDE 160 (293)
T ss_pred EEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhh-HHHHHHHHHHHHHhHHHHhhCC
Confidence 999999999999999999999999999999999999999999999999999999985 6789999999999999999999
Q ss_pred cEEEecCCCCCCCCcHHHHhhccccccCCCCCccccccccCCCC-CCCCccCCCCCccccCHHHHHHHHHHcCCcEEEEc
Q 024080 159 QIFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRA 237 (272)
Q Consensus 159 ~~l~vHaGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~-~~~~~~~~~g~~~~fg~~~~~~fl~~~~~~~iirg 237 (272)
+++|||||++|...++++++.++|+.+.|..+.+.+++||||.. ..+|.+++||.++.||.+++++||+++|+++||||
T Consensus 161 ~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~ 240 (293)
T cd07414 161 KIFCMHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKFLNKHDLDLICRA 240 (293)
T ss_pred cEEEEccCCCcccCcHHHHhcccCCCCCCchhhHhhhhccCcccccCCCccCCCCcceecCHHHHHHHHHHcCCeEEEEC
Confidence 99999999999999999999999999988889999999999975 67899999999999999999999999999999999
Q ss_pred CCCCccCeeEeCCCeEEEEecccccc
Q 024080 238 HQLVMEGYNWCQVWNLKDHASFCFFS 263 (272)
Q Consensus 238 H~~~~~G~~~~~~~~li~i~s~~~~~ 263 (272)
||++++||++.++++++|+||++-|.
T Consensus 241 He~~~~G~~~~~~~~~iTvfSa~~Y~ 266 (293)
T cd07414 241 HQVVEDGYEFFAKRQLVTLFSAPNYC 266 (293)
T ss_pred CccccCeEEEeCCCcEEEEecCCccc
Confidence 99999999999999999999987763
No 9
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=1e-60 Score=430.09 Aligned_cols=256 Identities=44% Similarity=0.771 Sum_probs=241.1
Q ss_pred hHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhccCcceecCCCceeeeCCCCCHHHHHHHHHHcCCCCCCeEEEecCccC
Q 024080 6 DLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVD 85 (272)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~e~~~~~~~~~i~viGDIHG~~~~l~~~l~~~~~~~~~~~vflGD~vD 85 (272)
.++-+++++++++.++++++.+||++|++++++||++++++.+++||||||||+.+|.++|+..+.++.+++||||||||
T Consensus 2 ~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~e~~l~~i~~~i~ViGDIHG~~~dL~~l~~~~g~~~~~~ylFLGDyVD 81 (305)
T cd07416 2 RIDVLKAHFMREGRLSEEDALRIITEGAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANTRYLFLGDYVD 81 (305)
T ss_pred CHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCeEccCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEECCccC
Confidence 47889999999999999999999999999999999999999999999999999999999999999988999999999999
Q ss_pred CCCCcHHHHHHHHHhhHhcCCcEEEEccCcchhhhhhhhCChHHHHHHhCChhHHHHHHHHhhccCceEEEcCcEEEecC
Q 024080 86 RGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQIFCLHG 165 (272)
Q Consensus 86 rG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~l~vHa 165 (272)
||++|+||+.+++++|..+|.++++||||||.+.++..++|..++..+| ...+|..+.++|+.||++++++++++||||
T Consensus 82 RG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y-~~~l~~~~~~~f~~LPlaaii~~~i~~vHG 160 (305)
T cd07416 82 RGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMEAFDCLPLAALMNQQFLCVHG 160 (305)
T ss_pred CCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhc-cHHHHHHHHHHHhhccceeEEcCCEEEEcC
Confidence 9999999999999999999999999999999999999999999999888 467889999999999999999999999999
Q ss_pred CCCCCCCcHHHHhhccccccCCCCCccccccccCCCCCC-------CCccC-CCCCccccCHHHHHHHHHHcCCcEEEEc
Q 024080 166 GLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRC-------GWGIS-PRGAGYTFGQDIASQFNHTNGLSLISRA 237 (272)
Q Consensus 166 Gi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~~~-------~~~~~-~~g~~~~fg~~~~~~fl~~~~~~~iirg 237 (272)
|++|.+.++++++.++|+.+.|..+.+.|++||||.... .|..+ +||.++.||++++++||+++|+++||||
T Consensus 161 Gi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~l~~iiR~ 240 (305)
T cd07416 161 GLSPELKTLDDIRKLDRFREPPAFGPMCDLLWSDPLEDFGNEKTQEHFVHNTVRGCSYFYSYRAVCEFLQKNNLLSIIRA 240 (305)
T ss_pred CCCcccccHHHhcccCCCCCCCCCCcceeeeecCcccccccccccccccccCCCCCceecCHHHHHHHHHHcCCeEEEEe
Confidence 999999999999999999988888999999999997422 36554 8999999999999999999999999999
Q ss_pred CCCCccCeeEeCCC------eEEEEeccccc
Q 024080 238 HQLVMEGYNWCQVW------NLKDHASFCFF 262 (272)
Q Consensus 238 H~~~~~G~~~~~~~------~li~i~s~~~~ 262 (272)
||++++||++.+++ +++|+||++-|
T Consensus 241 He~~~~G~~~~~~~~~~~~~~~iTvFSa~~Y 271 (305)
T cd07416 241 HEAQDAGYRMYRKSQTTGFPSLITIFSAPNY 271 (305)
T ss_pred ccccccceEEecCCCcCCCCcEEEEeCCccc
Confidence 99999999998887 89999998766
No 10
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=2e-60 Score=429.18 Aligned_cols=259 Identities=37% Similarity=0.661 Sum_probs=242.3
Q ss_pred cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhccCcceecCCC----ceeeeCCCCCHHHHHHHHHHcCCCC-CCeEE
Q 024080 4 HGDLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVKCP----VTVCGDIHGQFYDLIELFRIGGNAP-DTNYL 78 (272)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~e~~~~~~~~~----i~viGDIHG~~~~l~~~l~~~~~~~-~~~~v 78 (272)
-+-+++++++++++..++++++.+||++|++++++||++++++.+ ++||||||||+.+|.++|+..++++ .+++|
T Consensus 13 ~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~~dL~~ll~~~g~~~~~~~yl 92 (316)
T cd07417 13 LEFVKEMIEWFKDQKKLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFELNGLPSETNPYL 92 (316)
T ss_pred HHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecccCCHHHHHHHHHhcCCCCccCeEE
Confidence 345899999999999999999999999999999999999998754 9999999999999999999999765 45799
Q ss_pred EecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccCcchhhhhhhhCChHHHHHHhCChhHHHHHHHHhhccCceEEEcC
Q 024080 79 FMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIES 158 (272)
Q Consensus 79 flGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~lPl~~~~~~ 158 (272)
|||||||||++|+||+.+++++|..+|+++++||||||.+.++..+||..++..+|+ ..++..+.++|++||+++++++
T Consensus 93 FLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~~-~~l~~~~~~~f~~LPlaaii~~ 171 (316)
T cd07417 93 FNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYN-EQMFDLFSEVFNWLPLAHLING 171 (316)
T ss_pred EEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhccc-HHHHHHHHHHHHhchHhheeCC
Confidence 999999999999999999999999999999999999999999999999999999985 6788999999999999999999
Q ss_pred cEEEecCCC-CCCCCcHHHHhhccccccCCCCCccccccccCCCCCCCCccCCCCCccccCHHHHHHHHHHcCCcEEEEc
Q 024080 159 QIFCLHGGL-SPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRA 237 (272)
Q Consensus 159 ~~l~vHaGi-~p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~~~~~~~~~~g~~~~fg~~~~~~fl~~~~~~~iirg 237 (272)
+++|||||+ ++....+++++.++|+.+.+..+.+.++|||||.+..+|.+++||.|+.||++++++||+++|+++||||
T Consensus 172 ~~~~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~s~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~ 251 (316)
T cd07417 172 KVLVVHGGLFSDDGVTLDDIRKIDRFRQPPDSGLMCELLWSDPQPQPGRSPSKRGVGCQFGPDVTKRFLEENNLEYIIRS 251 (316)
T ss_pred eEEEEccccccCCCccHHHhhcccCCCCCCccccceeeeecCCCCCCCCCccCCCCceEeCHHHHHHHHHHcCCcEEEEC
Confidence 999999999 4567889999999999888888889999999999888899999999999999999999999999999999
Q ss_pred CCCCccCeeEeCCCeEEEEecccccc
Q 024080 238 HQLVMEGYNWCQVWNLKDHASFCFFS 263 (272)
Q Consensus 238 H~~~~~G~~~~~~~~li~i~s~~~~~ 263 (272)
||++++||++.++++++|+||++-|.
T Consensus 252 He~~~~G~~~~~~~~~~TvfSa~~Y~ 277 (316)
T cd07417 252 HEVKDEGYEVEHDGKCITVFSAPNYC 277 (316)
T ss_pred CcccceeEEEecCCeEEEEeCCcccc
Confidence 99999999999999999999998773
No 11
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=1.6e-59 Score=416.63 Aligned_cols=242 Identities=52% Similarity=0.915 Sum_probs=231.8
Q ss_pred CCHHHHHHHHHHHHHHHhccCcceecCCCceeeeCCCCCHHHHHHHHHHcCCCCCCeEEEecCccCCCCCcHHHHHHHHH
Q 024080 20 LPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVA 99 (272)
Q Consensus 20 ~~~~~~~~l~~~~~~~l~~e~~~~~~~~~i~viGDIHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~ 99 (272)
++++++.+||+++++++++||++++++++++||||||||+.+|.++|+..+.++.+++||||||||||++|+|++.++++
T Consensus 1 ~~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~ 80 (271)
T smart00156 1 LYAEEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLFA 80 (271)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999998999999999999999999999999999
Q ss_pred hhHhcCCcEEEEccCcchhhhhhhhCChHHHHHHhCChhHHHHHHHHhhccCceEEEcCcEEEecCCCCCCCCcHHHHhh
Q 024080 100 LKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQIFCLHGGLSPSLDTLDNIRA 179 (272)
Q Consensus 100 l~~~~p~~v~~lrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~l~vHaGi~p~~~~~~~i~~ 179 (272)
+|..+|.+++++|||||.+.++..+||..++..+|+ ..+|+.+.++|+.||++++++++++|||||++|...++++++.
T Consensus 81 lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~-~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~~~~l~~i~~ 159 (271)
T smart00156 81 LKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYG-EEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPDLTTLDDIRK 159 (271)
T ss_pred HHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcC-HHHHHHHHHHHhhChhheEEcCeEEEEecCCCCccCCHHHHhc
Confidence 999999999999999999999999999999999995 6899999999999999999988999999999999999999999
Q ss_pred ccccccCCCCCccccccccCCC-CCCCCccCCCCCccccCHHHHHHHHHHcCCcEEEEcCCCCccCeeEeCCCeEEEEec
Q 024080 180 LDRIQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQVWNLKDHAS 258 (272)
Q Consensus 180 i~r~~~~~~~~~~~~llW~dp~-~~~~~~~~~~g~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~li~i~s 258 (272)
++|+.+.+..+.+.+++||||. ...+|.+++||.++.||++++++||+++|+++||||||++++||+..++++++|+||
T Consensus 160 i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfS 239 (271)
T smart00156 160 LKRPQEPPDEGLLIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEFFHDRKLVTIFS 239 (271)
T ss_pred ccCCCCCCchhhhhheeecCCCcccCCCccCCCCCccccCHHHHHHHHHHCCCeEEEecCcccCCcEEEecCCcEEEEEC
Confidence 9999888888999999999995 477899999999999999999999999999999999999999999999999999999
Q ss_pred cccc
Q 024080 259 FCFF 262 (272)
Q Consensus 259 ~~~~ 262 (272)
+.-|
T Consensus 240 a~~y 243 (271)
T smart00156 240 APNY 243 (271)
T ss_pred Cccc
Confidence 8766
No 12
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=3.4e-60 Score=427.84 Aligned_cols=244 Identities=49% Similarity=0.932 Sum_probs=237.9
Q ss_pred CCCHHHHHHHHHHHHHHHhccCcceecCCCceeeeCCCCCHHHHHHHHHHcC-CCCCCeEEEecCccCCCCCcHHHHHHH
Q 024080 19 PLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGG-NAPDTNYLFMGDYVDRGYYSVETVTLL 97 (272)
Q Consensus 19 ~~~~~~~~~l~~~~~~~l~~e~~~~~~~~~i~viGDIHG~~~~l~~~l~~~~-~~~~~~~vflGD~vDrG~~s~evl~~l 97 (272)
.++++++.+||..+.+++.++|+++++++||.|+|||||+|.+|.+++...+ +++..++||||||||||++|+|++.++
T Consensus 31 ~l~~~ei~~l~~~~~~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g~~pp~~~ylFLGDYVDRG~~slE~i~LL 110 (331)
T KOG0374|consen 31 PLSKSEIIKLCDKAREIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLGSFPPDQNYVFLGDYVDRGKQSLETICLL 110 (331)
T ss_pred eccHHHHHHHHHHHHHHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcCCCCCcccEEEecccccCCccceEEeehh
Confidence 4889999999999999999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHhhHhcCCcEEEEccCcchhhhhhhhCChHHHHHHhCChhHHHHHHHHhhccCceEEEcCcEEEecCCCCCCCCcHHHH
Q 024080 98 VALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQIFCLHGGLSPSLDTLDNI 177 (272)
Q Consensus 98 ~~l~~~~p~~v~~lrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~l~vHaGi~p~~~~~~~i 177 (272)
+++|++||++++++|||||.+.++..|||++||.++|+...+|..+.+.|+.||++++++++++|+|||++|.+..++++
T Consensus 111 ~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~~~~w~~F~~~f~~mp~~a~i~~kI~CmhGGlsp~l~~~~~i 190 (331)
T KOG0374|consen 111 FALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGEIKLWKAFNDAFNCLPLAALIDGKILCMHGGLSPHLKSLDQI 190 (331)
T ss_pred hhhhhhCCceEEEeccccccccccceeeeHHHHHHhcchHHHHHHHHHHHhhCchhheecceEEEecCCCChhhcChHHH
Confidence 99999999999999999999999999999999999997778999999999999999999999999999999999999999
Q ss_pred hhccccccCCCCCccccccccCCCC-CCCCccCCCCCccccCHHHHHHHHHHcCCcEEEEcCCCCccCeeEeCCCeEEEE
Q 024080 178 RALDRIQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQVWNLKDH 256 (272)
Q Consensus 178 ~~i~r~~~~~~~~~~~~llW~dp~~-~~~~~~~~~g~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~li~i 256 (272)
+.+.||.+.|..+.++|++|+||+. ..+|..+.||.++.||++++++||+++++++||||||++++||+++.+.+++||
T Consensus 191 ~~i~rp~~~~~~gll~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~f~~~~~ldlivRaHqvv~dGyeffa~r~lvTI 270 (331)
T KOG0374|consen 191 RAIPRPTDSPDKGLLCDLLWSDPDDDVPGWEENDRGVSFTFGPAVVEDFCKKLDLDLIVRAHQVVEDGYEFFAGRKLVTI 270 (331)
T ss_pred hhccCCcCCCccceeeeeeecCCCCCCCCcccCCCceeeEecHHHHHHHHHHhCcceEEEcCccccccceEecCceEEEE
Confidence 9999999999999999999999986 689999999999999999999999999999999999999999999999999999
Q ss_pred eccccc
Q 024080 257 ASFCFF 262 (272)
Q Consensus 257 ~s~~~~ 262 (272)
||++.|
T Consensus 271 FSAP~Y 276 (331)
T KOG0374|consen 271 FSAPNY 276 (331)
T ss_pred ecCchh
Confidence 999988
No 13
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=2.9e-58 Score=420.43 Aligned_cols=269 Identities=35% Similarity=0.540 Sum_probs=238.4
Q ss_pred CcchHHHHHHHHhcC----------CCCCHHHHHHHHHHHHHHHhccCcceecC----CCceeeeCCCCCHHHHHHHHHH
Q 024080 3 SHGDLDRQIEHLMEC----------KPLPEAEVKTLCDQARAILVEEWNVQPVK----CPVTVCGDIHGQFYDLIELFRI 68 (272)
Q Consensus 3 ~~~~~~~~~~~~~~~----------~~~~~~~~~~l~~~~~~~l~~e~~~~~~~----~~i~viGDIHG~~~~l~~~l~~ 68 (272)
|.+.++.+|+.++.. ..++.+++.+||++|++++++||++++++ .+++|||||||++.+|.++|+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~ll~~ 87 (377)
T cd07418 8 TNEWVHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLLED 87 (377)
T ss_pred CHHHHHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHHHHHH
Confidence 456688999999654 34789999999999999999999999997 7999999999999999999999
Q ss_pred cCCCCC-CeEEEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccCcchhhhhhhhCChHHHHHHhCC--hhHHHHHHH
Q 024080 69 GGNAPD-TNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGN--ANVWKYFTD 145 (272)
Q Consensus 69 ~~~~~~-~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~g~~~e~~~~~~~--~~~~~~~~~ 145 (272)
.+.++. +++||||||||||++|+||+.+++.++..+|+++++||||||.+.++..+||..++..+|+. ..+++.+.+
T Consensus 88 ~g~~~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~~l~~~~~~ 167 (377)
T cd07418 88 AGFPDQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGKHVYRKCLG 167 (377)
T ss_pred hCCCCCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCchHHHHHHHHHH
Confidence 998764 56999999999999999999999999999999999999999999999999999999999975 478999999
Q ss_pred HhhccCceEEEcCcEEEecCCCCC---------------------------CCCcHHHHhhccccc-cCCCCC---cccc
Q 024080 146 LFDYLPLTALIESQIFCLHGGLSP---------------------------SLDTLDNIRALDRIQ-EVPHEG---PMCD 194 (272)
Q Consensus 146 ~~~~lPl~~~~~~~~l~vHaGi~p---------------------------~~~~~~~i~~i~r~~-~~~~~~---~~~~ 194 (272)
+|++||++++++++++||||||++ ...++++++.++|+. +.|..+ .+.|
T Consensus 168 ~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~~~i~~d 247 (377)
T cd07418 168 CFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNLIPGD 247 (377)
T ss_pred HHHhCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCcccccee
Confidence 999999999998899999999943 456788899888863 444444 3689
Q ss_pred ccccCCCCCCCCccC-CCCCccccCHHHHHHHHHHcCCcEEEEcCCC------------CccCeeEeCC---CeEEEEec
Q 024080 195 LLWSDPDDRCGWGIS-PRGAGYTFGQDIASQFNHTNGLSLISRAHQL------------VMEGYNWCQV---WNLKDHAS 258 (272)
Q Consensus 195 llW~dp~~~~~~~~~-~~g~~~~fg~~~~~~fl~~~~~~~iirgH~~------------~~~G~~~~~~---~~li~i~s 258 (272)
+|||||....+|..+ .||.|+.||.+++++||+++++++||||||+ +.+||++.++ ++++|+||
T Consensus 248 lLWSDP~~~~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~~~~~~~liTvFS 327 (377)
T cd07418 248 VLWSDPSLTPGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHDVESGKLITLFS 327 (377)
T ss_pred eEeeCCccCCCCCccCCCCCccccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEeccCCCCcEEEEec
Confidence 999999987777765 7999999999999999999999999999996 6799999887 99999999
Q ss_pred ccccc---cccccccC
Q 024080 259 FCFFS---HFHLLFNN 271 (272)
Q Consensus 259 ~~~~~---~~~~~~~~ 271 (272)
+.-|. +|...++|
T Consensus 328 a~nY~~~~~~~~~~~N 343 (377)
T cd07418 328 APDYPQFQATEERYNN 343 (377)
T ss_pred CCccccccccccccCc
Confidence 99886 34445555
No 14
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=7.3e-57 Score=406.59 Aligned_cols=245 Identities=41% Similarity=0.732 Sum_probs=224.9
Q ss_pred CCCCHHHHHHHHHHHHHHHhccCcceecCCCceeeeCCCCCHHHHHHHHHHcCCCCC--------CeEEEecCccCCCCC
Q 024080 18 KPLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPD--------TNYLFMGDYVDRGYY 89 (272)
Q Consensus 18 ~~~~~~~~~~l~~~~~~~l~~e~~~~~~~~~i~viGDIHG~~~~l~~~l~~~~~~~~--------~~~vflGD~vDrG~~ 89 (272)
..++++++.+||++|++++++||++++++.+++||||||||+.+|.++|+.++.++. .++|||||||||||+
T Consensus 19 ~~~~~~~i~~l~~~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~~~~~~vfLGDyVDRGp~ 98 (311)
T cd07419 19 FFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYVDRGSN 98 (311)
T ss_pred cCCCHHHHHHHHHHHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCCCcCceEEEECCccCCCCC
Confidence 458899999999999999999999999999999999999999999999999987643 579999999999999
Q ss_pred cHHHHHHHHHhhHhcCCcEEEEccCcchhhhhhhhCChHHHHHHhCC-----hhHHHHHHHHhhccCceEEEcCcEEEec
Q 024080 90 SVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGN-----ANVWKYFTDLFDYLPLTALIESQIFCLH 164 (272)
Q Consensus 90 s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~g~~~e~~~~~~~-----~~~~~~~~~~~~~lPl~~~~~~~~l~vH 164 (272)
|+||+.++++++..+|.++++||||||.+.++..+||..++..+|+. ..++..+.++|++||++++++++++|||
T Consensus 99 s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~f~~LPl~avi~~~~l~vH 178 (311)
T cd07419 99 SLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLFEWLPLAAIIEDKILCMH 178 (311)
T ss_pred hHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHHHHhCchhheecccEEEEc
Confidence 99999999999999999999999999999999999999999888875 3688999999999999999889999999
Q ss_pred CCCCCCCCcHHHHhhccccc-cCCCCCccccccccCCCCC---CCCccCC---CCCc--cccCHHHHHHHHHHcCCcEEE
Q 024080 165 GGLSPSLDTLDNIRALDRIQ-EVPHEGPMCDLLWSDPDDR---CGWGISP---RGAG--YTFGQDIASQFNHTNGLSLIS 235 (272)
Q Consensus 165 aGi~p~~~~~~~i~~i~r~~-~~~~~~~~~~llW~dp~~~---~~~~~~~---~g~~--~~fg~~~~~~fl~~~~~~~ii 235 (272)
||++|....+++++.+.|+. ..+..+.+.+++||||.+. .+|.+++ ||.| +.||++++++||+++|+++||
T Consensus 179 gGi~p~~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~fg~~~~~~Fl~~n~l~~ii 258 (311)
T cd07419 179 GGIGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKFGPDRVHRFLEENDLQMII 258 (311)
T ss_pred cCCCCCCCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeECHHHHHHHHHHCCCeEEE
Confidence 99999999999999999986 4455677899999999853 4566655 8888 689999999999999999999
Q ss_pred EcCCCCccCeeEeCCCeEEEEeccccc
Q 024080 236 RAHQLVMEGYNWCQVWNLKDHASFCFF 262 (272)
Q Consensus 236 rgH~~~~~G~~~~~~~~li~i~s~~~~ 262 (272)
||||++++||++.++++++|+||+.-|
T Consensus 259 RgHe~~~~G~~~~~~~~~iTvfSa~~y 285 (311)
T cd07419 259 RAHECVMDGFERFAQGKLITLFSATNY 285 (311)
T ss_pred EechhhhCCeEEeCCCeEEEEecCCcc
Confidence 999999999999999999999998765
No 15
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-56 Score=378.89 Aligned_cols=259 Identities=82% Similarity=1.376 Sum_probs=251.9
Q ss_pred cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhccCcceecCCCceeeeCCCCCHHHHHHHHHHcCCCCCCeEEEecCc
Q 024080 4 HGDLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDY 83 (272)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~e~~~~~~~~~i~viGDIHG~~~~l~~~l~~~~~~~~~~~vflGD~ 83 (272)
+..++.+|+++.+++++++.++..+|+.|+++|.++.++.+++.+++|+||+||+|++|.++++..|..++..++|+|||
T Consensus 17 i~~vd~~ie~L~~ck~lse~~v~~lc~~a~~~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~pdtnylfmGDy 96 (319)
T KOG0371|consen 17 ILDVDPWIEQLYKCKPLSEVDVSSLCLLAKEILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLAPDTNYLFMGDY 96 (319)
T ss_pred ccccccchHHHHhcCCCccccchhHHHHHHHHHhccccccccccceEEecCcchhHHHHHHHHHccCCCCCcceeeeeee
Confidence 45688999999999999999999999999999999999999999999999999999999999988889999999999999
Q ss_pred cCCCCCcHHHHHHHHHhhHhcCCcEEEEccCcchhhhhhhhCChHHHHHHhCChhHHHHHHHHhhccCceEEEcCcEEEe
Q 024080 84 VDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQIFCL 163 (272)
Q Consensus 84 vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~l~v 163 (272)
||||++|.|++.++.++|.+||++|.+||||||...+...|||++||.++||....|..+.+.|+.+|+.+.++++++|.
T Consensus 97 vdrGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~anvw~~Ftdlfdy~P~tali~~~ifc~ 176 (319)
T KOG0371|consen 97 VDRGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESKIFCL 176 (319)
T ss_pred cccccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccccchHHhhhhhhccchHhhhccceeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCcHHHHhhccccccCCCCCccccccccCCCCCCCCccCCCCCccccCHHHHHHHHHHcCCcEEEEcCCCCcc
Q 024080 164 HGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVME 243 (272)
Q Consensus 164 HaGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~~~~~~~~~~g~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~ 243 (272)
|||++|.+..++.++.+.|..++|.+++++|+||+||+++.+|..++||.++.||.+..++|-.++|++++-|.||-+.+
T Consensus 177 HGgLspsi~tld~~r~~dr~~evphegpmcDlLwsdpddr~gwg~sprgag~tfg~di~~~fn~~n~lslisRahqlvm~ 256 (319)
T KOG0371|consen 177 HGGLSPSIDTLDLIRLLDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHKNGLSLISRAHQLVME 256 (319)
T ss_pred cCCcCcccchHHHHHHHHHhhcccCCCChhheeccCcccCCCCCCCCCCCCcccchhhHHHhhccCCchHhHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeEeCCCeEEEEeccccc
Q 024080 244 GYNWCQVWNLKDHASFCFF 262 (272)
Q Consensus 244 G~~~~~~~~li~i~s~~~~ 262 (272)
||.+.+++.++++||++=|
T Consensus 257 g~nW~~~~~~vtiFSapny 275 (319)
T KOG0371|consen 257 GYNWYHLWNVVTIFSAPNY 275 (319)
T ss_pred ccceeeecceeEEccCCch
Confidence 9999999999999998644
No 16
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=4.5e-54 Score=379.24 Aligned_cols=255 Identities=43% Similarity=0.767 Sum_probs=238.2
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhccCcceecCCCceeeeCCCCCHHHHHHHHHHcCCCCCCeEEEecCccCC
Q 024080 7 LDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDR 86 (272)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~e~~~~~~~~~i~viGDIHG~~~~l~~~l~~~~~~~~~~~vflGD~vDr 86 (272)
.+-+-+++.+...++++..+.++.++..+|++|+++++++.||.|+|||||+|.+|.++++..|.+...+|+||||||||
T Consensus 48 ~~~Lr~Hf~~EGrl~ee~alrIi~~~a~llr~Eknmi~v~APiTVCGDIHGQf~DLmKLFEVGG~PA~t~YLFLGDYVDR 127 (517)
T KOG0375|consen 48 HDVLRNHFIKEGRLEEEQALRIINEGAALLRQEKNMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDR 127 (517)
T ss_pred hHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCCceEeccCCeeEecccchHHHHHHHHHHccCCcccceeEeecccccc
Confidence 56678888888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHhhHhcCCcEEEEccCcchhhhhhhhCChHHHHHHhCChhHHHHHHHHhhccCceEEEcCcEEEecCC
Q 024080 87 GYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQIFCLHGG 166 (272)
Q Consensus 87 G~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~l~vHaG 166 (272)
|..|+||+.+|.+||+.||...++||||||++.+...+.|..||..+| +..+++...+.|+.||++|..++.++|||||
T Consensus 128 GyFSiECvlYLwsLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKY-se~vYdaCmesFd~LPLAAlmNqQflCVHGG 206 (517)
T KOG0375|consen 128 GYFSIECVLYLWSLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMESFDCLPLAALMNQQFLCVHGG 206 (517)
T ss_pred ceeeeehHHHHHHHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhc-cHHHHHHHHHHhccchHHHHhcCceEEecCC
Confidence 999999999999999999999999999999999999999999999999 6899999999999999999999999999999
Q ss_pred CCCCCCcHHHHhhccccccCCCCCccccccccCCCC-------CCCCc-cCCCCCccccCHHHHHHHHHHcCCcEEEEcC
Q 024080 167 LSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDD-------RCGWG-ISPRGAGYTFGQDIASQFNHTNGLSLISRAH 238 (272)
Q Consensus 167 i~p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~-------~~~~~-~~~~g~~~~fg~~~~~~fl~~~~~~~iirgH 238 (272)
++|.+.++++|+.++|..+.|..+++||+||+||.+ .+.|. ++-||.+|.|...++.+||+.||+--|||+|
T Consensus 207 lSPEi~tl~DIr~l~RF~EpPa~GpmCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy~A~C~FLq~nnLLSIiRAH 286 (517)
T KOG0375|consen 207 LSPEIHTLDDIRKLDRFKEPPAFGPMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSYPAVCEFLQNNNLLSIIRAH 286 (517)
T ss_pred CCcccccHHHHHhhhhccCCCccCcchhhhccChhhhccccccccccccCccccccceechHHHHHHHHhCCchhhhhhh
Confidence 999999999999999999999999999999999964 22233 4579999999999999999999999999999
Q ss_pred CCCccCeeEeCCCe------EEEEeccccc
Q 024080 239 QLVMEGYNWCQVWN------LKDHASFCFF 262 (272)
Q Consensus 239 ~~~~~G~~~~~~~~------li~i~s~~~~ 262 (272)
+.++.||+..-..+ +|||+|++-|
T Consensus 287 EAQDaGYRMYrksqttGFPSLiTiFSAPNY 316 (517)
T KOG0375|consen 287 EAQDAGYRMYRKSQTTGFPSLITIFSAPNY 316 (517)
T ss_pred hhhhhhhhhhhcccccCCchheeeecCCch
Confidence 99999998877666 4666666544
No 17
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-46 Score=339.53 Aligned_cols=257 Identities=31% Similarity=0.575 Sum_probs=226.0
Q ss_pred chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhccCcceecC----CCceeeeCCCCCHHHHHHHHHHcCCCCCC-eEEE
Q 024080 5 GDLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVK----CPVTVCGDIHGQFYDLIELFRIGGNAPDT-NYLF 79 (272)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~e~~~~~~~----~~i~viGDIHG~~~~l~~~l~~~~~~~~~-~~vf 79 (272)
-+++.+|+.++..+++++..++.++.+|+++|++.|++-+++ ..+.|+||+||.+++|.-+|-+-|.|..+ -|||
T Consensus 119 ~~i~~lieaFk~kq~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qVTiCGDLHGklDDL~~I~yKNGlPS~~npYvF 198 (631)
T KOG0377|consen 119 NHIDLLIEAFKKKQRLHPKYVLLILREAKKSLKQMPNISRISTSVSQQVTICGDLHGKLDDLLVILYKNGLPSSSNPYVF 198 (631)
T ss_pred hHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHhCCCCCccccccccceEEeccccccccceEEEEecCCCCCCCCCeee
Confidence 358999999999999999999999999999999999998874 57999999999999999999999987654 5999
Q ss_pred ecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccCcchhhhhhhhCChHHHHHHhCC--hhHHHHHHHHhhccCceEEEc
Q 024080 80 MGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGN--ANVWKYFTDLFDYLPLTALIE 157 (272)
Q Consensus 80 lGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~g~~~e~~~~~~~--~~~~~~~~~~~~~lPl~~~~~ 157 (272)
-||+||||.+|+|||..|+++...||..+++-|||||..+++-.|||..|...+|.. ..+...+.+++++||++.+++
T Consensus 199 NGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~~k~Ilr~leevy~WLPi~tiid 278 (631)
T KOG0377|consen 199 NGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRHGKRILRFLEEVYRWLPIGTIID 278 (631)
T ss_pred cCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhcccHHHHHHHHHHHhcchhhhcc
Confidence 999999999999999999999999999999999999999999999999999999964 567788899999999999999
Q ss_pred CcEEEecCCCCCCCCcHHHHhhcccccc-----CC-----------------CCCccccccccCCCCCCC-CccCCCCCc
Q 024080 158 SQIFCLHGGLSPSLDTLDNIRALDRIQE-----VP-----------------HEGPMCDLLWSDPDDRCG-WGISPRGAG 214 (272)
Q Consensus 158 ~~~l~vHaGi~p~~~~~~~i~~i~r~~~-----~~-----------------~~~~~~~llW~dp~~~~~-~~~~~~g~~ 214 (272)
.++++||||++.. +.++-+..+.|-.- .| .+..+.|+|||||....+ |.+.-||.|
T Consensus 279 ~~ilvvHGGiSd~-Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~~~~GC~pNt~RGgG 357 (631)
T KOG0377|consen 279 SRILVVHGGISDS-TDLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQATMGCVPNTLRGGG 357 (631)
T ss_pred cceEEEecCcccc-hhHHHHhhhhccceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcccccCCCcccccCCc
Confidence 9999999999743 34444444443210 11 112357899999987665 555679999
Q ss_pred cccCHHHHHHHHHHcCCcEEEEcCCCCccCeeEeCCCeEEEEeccccc
Q 024080 215 YTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQVWNLKDHASFCFF 262 (272)
Q Consensus 215 ~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~li~i~s~~~~ 262 (272)
++||++++.+||++.+++++||+|+|.|+||++++|++++||||+--|
T Consensus 358 ~yFGpDvT~~~Lqk~~l~~liRSHECKpeGyEf~Hd~kvlTiFSASNY 405 (631)
T KOG0377|consen 358 CYFGPDVTDNFLQKHRLSYLIRSHECKPEGYEFCHDNKVLTIFSASNY 405 (631)
T ss_pred ceeCchHHHHHHHHhCceeeeeecccCCCcceeeeCCeEEEEEeccch
Confidence 999999999999999999999999999999999999999999998655
No 18
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=100.00 E-value=3.8e-38 Score=289.37 Aligned_cols=261 Identities=37% Similarity=0.676 Sum_probs=237.5
Q ss_pred CcchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhccCcceecC----CCceeeeCCCCCHHHHHHHHHHcCCCC-CCeE
Q 024080 3 SHGDLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVK----CPVTVCGDIHGQFYDLIELFRIGGNAP-DTNY 77 (272)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~e~~~~~~~----~~i~viGDIHG~~~~l~~~l~~~~~~~-~~~~ 77 (272)
|.+.++.+.+.+.+...++...+-+|++.+..+++++|++++++ ..+.++||.||++.++..+++..+.++ ...+
T Consensus 166 t~e~vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~y 245 (476)
T KOG0376|consen 166 TLEFVKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPY 245 (476)
T ss_pred hHHHHHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcccc
Confidence 34556677777778888999999999999999999999998874 468999999999999999999998765 4679
Q ss_pred EEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccCcchhhhhhhhCChHHHHHHhCChhHHHHHHHHhhccCceEEEc
Q 024080 78 LFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIE 157 (272)
Q Consensus 78 vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~lPl~~~~~ 157 (272)
+|-||++|||..|.|+...+...+..+|++++++|||||...++..|||..++..+|. ...+.-+.+.|..||++..++
T Consensus 246 lfngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyt-e~~~~~f~~~f~~LPl~~~i~ 324 (476)
T KOG0376|consen 246 LFNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYT-EEMFNLFSEVFIWLPLAHLIN 324 (476)
T ss_pred cccCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhH-HHHHHhhhhhhccccchhhhc
Confidence 9999999999999999999999999999999999999999999999999999999995 444445558999999999999
Q ss_pred CcEEEecCCCC-CCCCcHHHHhhccccccCCCCCccccccccCCCCCCCCccCCCCCccccCHHHHHHHHHHcCCcEEEE
Q 024080 158 SQIFCLHGGLS-PSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISR 236 (272)
Q Consensus 158 ~~~l~vHaGi~-p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~~~~~~~~~~g~~~~fg~~~~~~fl~~~~~~~iir 236 (272)
++++.+|||+. +....+++++.|.|+...|..+..++++|+||....+..++.||.|..||.+++..||+.++++.|||
T Consensus 325 ~~~~~~hgglf~~~~v~l~d~r~i~r~~~~~~~~~~~~~lws~pq~~~g~s~S~r~~g~~fG~d~t~~f~~~n~l~~i~r 404 (476)
T KOG0376|consen 325 NKVLVMHGGLFSPDGVTLEDFRNIDRFEQPPEEGLMCELLWSDPQPANGRSPSKRGVGLQFGPDVTERFLQDNNLDKIIR 404 (476)
T ss_pred CceEEEecCcCCCCCccHHHHHhhhhccCCcccccccccccCCCccccCCCccccCceeeeCCCchhhHHhhcchHHHhh
Confidence 99999999984 45567999999999988888999999999999999999999999999999999999999999999999
Q ss_pred cCCCCccCeeEeCCCeEEEEeccccccc
Q 024080 237 AHQLVMEGYNWCQVWNLKDHASFCFFSH 264 (272)
Q Consensus 237 gH~~~~~G~~~~~~~~li~i~s~~~~~~ 264 (272)
||+....||+..++|+++|++|+..|..
T Consensus 405 she~~d~gy~~eh~g~l~tvfsapnycd 432 (476)
T KOG0376|consen 405 SHEVKDEGYEVEHSGKLITVFSAPNYCD 432 (476)
T ss_pred ccccCCCceeeecCCcEEEEecCcchhh
Confidence 9999999999999999999999998854
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=100.00 E-value=4.8e-35 Score=252.88 Aligned_cols=202 Identities=47% Similarity=0.751 Sum_probs=165.7
Q ss_pred eeeeCCCCCHHHHHHHHHHcCCCCCCeEEEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccCcchhhhhhhhCChHH
Q 024080 50 TVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDE 129 (272)
Q Consensus 50 ~viGDIHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~g~~~e 129 (272)
+|||||||++++|.++++.++..+.+++||+||+||||+++.+++.++++++.. |.++++|+||||.+.++...++..+
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~~ 79 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYDE 79 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcch
Confidence 589999999999999999999888999999999999999999999999998776 7789999999999988766554432
Q ss_pred H--------HHHhCChhHHHHHHHHhhccCceEEEcC-cEEEecCCCCCCCCcHHHHhhccccccCCCCCccccccccCC
Q 024080 130 C--------LRKYGNANVWKYFTDLFDYLPLTALIES-QIFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDP 200 (272)
Q Consensus 130 ~--------~~~~~~~~~~~~~~~~~~~lPl~~~~~~-~~l~vHaGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp 200 (272)
. ...+.....+..+.+++..||+++.++. +++|||||++|......+.. ..+......+++|++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~~~~~~~~~lw~r~ 153 (225)
T cd00144 80 DEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EEPEDQLPEDLLWSDP 153 (225)
T ss_pred hhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cCcccccceeeeecCC
Confidence 2 2233345677888899999999988865 99999999999887655443 2233445689999998
Q ss_pred CCCCCCc-cCCCCCccccCHHHHHHHHHHcCCcEEEEcCCCCccCeeEeCCCeEEEEeccccc
Q 024080 201 DDRCGWG-ISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQVWNLKDHASFCFF 262 (272)
Q Consensus 201 ~~~~~~~-~~~~g~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~li~i~s~~~~ 262 (272)
.....+. .+.++. |++....+++.++.++||+||+++..|+.+..++++++|+|.|.|
T Consensus 154 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~~~~~~~~~~~~~~i~IDtg~~~ 212 (225)
T cd00144 154 LELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTPVEEGYEFGHDGNLITIDSGCNY 212 (225)
T ss_pred CCCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCccccCccEEcCCCCEEEEecCCcc
Confidence 6533322 222222 899999999999999999999999999877789999999999998
No 20
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.97 E-value=7.7e-30 Score=223.89 Aligned_cols=180 Identities=22% Similarity=0.348 Sum_probs=127.3
Q ss_pred CCceeeeCCCCCHHHHHHHHHHcCCC---------CCCeEEEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccCcch
Q 024080 47 CPVTVCGDIHGQFYDLIELFRIGGNA---------PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHES 117 (272)
Q Consensus 47 ~~i~viGDIHG~~~~l~~~l~~~~~~---------~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~ 117 (272)
++++||||||||++.|.++|+++++. +.+++|||||||||||+|.+|+++++++.. +.++++|+||||.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~~--~~~~~~l~GNHE~ 78 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELVE--KKAAYYVPGNHCN 78 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHhh--CCCEEEEeCccHH
Confidence 57899999999999999999998863 467899999999999999999999998853 5589999999999
Q ss_pred hhhhhhhC-------ChHHHHHHhCC------hhHHHHHHHHhhccCceEEE-cCcEEEecCCCCCCCCc--HHHHhhcc
Q 024080 118 RQITQVYG-------FYDECLRKYGN------ANVWKYFTDLFDYLPLTALI-ESQIFCLHGGLSPSLDT--LDNIRALD 181 (272)
Q Consensus 118 ~~~~~~~g-------~~~e~~~~~~~------~~~~~~~~~~~~~lPl~~~~-~~~~l~vHaGi~p~~~~--~~~i~~i~ 181 (272)
++++...+ ...++...|.. ..+.+.+.+|++.+|+...+ .++++|||||++|.... ..++.
T Consensus 79 ~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~~~~~~~~~~~--- 155 (245)
T PRK13625 79 KLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQDYIGRQDKKVQ--- 155 (245)
T ss_pred HHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChHhcccchhhhh---
Confidence 98875432 12334444431 23567788999999998765 36899999999876311 11111
Q ss_pred ccccCCCCCccccccccC--------CCC-CCCCccCCCCCccccCHHHHHHHHHHcCCcEEEEcCCCCccCeeEeCCCe
Q 024080 182 RIQEVPHEGPMCDLLWSD--------PDD-RCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQVWN 252 (272)
Q Consensus 182 r~~~~~~~~~~~~llW~d--------p~~-~~~~~~~~~g~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~ 252 (272)
..++|++ +.. +..|.... .|.+.+|.||+++.... ..++
T Consensus 156 -----------~~~l~~~~~~~~~~~~~~~~~~~~~~~------------------~g~~~vV~GHtp~~~~~---~~~~ 203 (245)
T PRK13625 156 -----------TFVLYGDITGEKHPDGSPVRRDWAKEY------------------KGTAWIVYGHTPVKEPR---FVNH 203 (245)
T ss_pred -----------hHHhhccccCCcCCCCCeeeeccchhc------------------CCCcEEEECCCCCccce---ecCC
Confidence 2334432 110 11222211 24457899999987543 2355
Q ss_pred EEEEecccccc
Q 024080 253 LKDHASFCFFS 263 (272)
Q Consensus 253 li~i~s~~~~~ 263 (272)
.+.|+..|.||
T Consensus 204 ~i~IDtGa~~g 214 (245)
T PRK13625 204 TVNIDTGCVFG 214 (245)
T ss_pred eEEEECcCccC
Confidence 78888888875
No 21
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.96 E-value=1.3e-28 Score=211.01 Aligned_cols=177 Identities=19% Similarity=0.253 Sum_probs=129.4
Q ss_pred eeeeCCCCCHHHHHHHHHHcCC--------CCCCeEEEecCccCCCCCcHHHHHHHHHhhHh---cCCcEEEEccCcchh
Q 024080 50 TVCGDIHGQFYDLIELFRIGGN--------APDTNYLFMGDYVDRGYYSVETVTLLVALKVR---YRDRITILRGNHESR 118 (272)
Q Consensus 50 ~viGDIHG~~~~l~~~l~~~~~--------~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~---~p~~v~~lrGNHE~~ 118 (272)
+||||||||+++|.++|+.++. .+.+.+|++||+|||||++.+|++++++++.+ .+.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 5899999999999999999874 35788999999999999999999999999754 346799999999999
Q ss_pred hhhhhhCChH-HHHHHhCC-----h---hHHHHHHHHhhccCceEEEcCcEEEecCCCCCCCCcHHHHhhccccccCCCC
Q 024080 119 QITQVYGFYD-ECLRKYGN-----A---NVWKYFTDLFDYLPLTALIESQIFCLHGGLSPSLDTLDNIRALDRIQEVPHE 189 (272)
Q Consensus 119 ~~~~~~g~~~-e~~~~~~~-----~---~~~~~~~~~~~~lPl~~~~~~~~l~vHaGi~p~~~~~~~i~~i~r~~~~~~~ 189 (272)
.++..+.+.. ........ . .....+.+|++.+|+...+ ++++|||||++|
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~-~~~~fvHag~~~-------------------- 139 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKV-NDTLFVHGGLGP-------------------- 139 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEE-CCEEEEeCCcHH--------------------
Confidence 9864433211 11111100 0 1123568999999998776 579999999933
Q ss_pred CccccccccCCCCCCCCccCCCCCccccCHHHHHHHHHHcCCcEEEEcCCCCccCeeEeCCCeEEEEeccc
Q 024080 190 GPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQVWNLKDHASFC 260 (272)
Q Consensus 190 ~~~~~llW~dp~~~~~~~~~~~g~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~li~i~s~~ 260 (272)
+|++. .+.... ....+...+.++++.++.+++|+|||+++.|....++|++++|+...
T Consensus 140 ------~w~r~----y~~~~~---~~~~~~~~~~~~l~~~~~~~iv~GHTh~~~~~~~~~~g~~i~ID~g~ 197 (208)
T cd07425 140 ------LWYRG----YSKETS---DKECAAAHLDKVLERLGAKRMVVGHTPQEGGIVTFCGGKVIRIDVGM 197 (208)
T ss_pred ------HHhhH----hhhhhh---hccchHHHHHHHHHHcCCCeEEEcCeeeecCceEEECCEEEEEeCCc
Confidence 23210 000000 00012246778899999999999999999988778999999997643
No 22
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.96 E-value=2.4e-28 Score=216.99 Aligned_cols=207 Identities=19% Similarity=0.257 Sum_probs=141.8
Q ss_pred CCceeeeCCCCCHHHHHHHHHHcCCC-CCCeEEEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccCcchhhhhhhhC
Q 024080 47 CPVTVCGDIHGQFYDLIELFRIGGNA-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYG 125 (272)
Q Consensus 47 ~~i~viGDIHG~~~~l~~~l~~~~~~-~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~g 125 (272)
|+++||||||||+++|.++|+++++. ..+.+||+||+|||||+|.+|++++.++ +.++++|+||||.++++..++
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l----~~~~~~VlGNHD~~ll~~~~g 76 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSL----GDSAVTVLGNHDLHLLAVAAG 76 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhc----CCCeEEEecChhHHHHHhhcC
Confidence 57999999999999999999999864 5688999999999999999999999987 457999999999998876555
Q ss_pred Ch----HHHHHHhCChhHHHHHHHHhhccCceEEE-cCcEEEecCCCCCCCCcHHHHhhcccc---ccCCCCC-cccccc
Q 024080 126 FY----DECLRKYGNANVWKYFTDLFDYLPLTALI-ESQIFCLHGGLSPSLDTLDNIRALDRI---QEVPHEG-PMCDLL 196 (272)
Q Consensus 126 ~~----~e~~~~~~~~~~~~~~~~~~~~lPl~~~~-~~~~l~vHaGi~p~~~~~~~i~~i~r~---~~~~~~~-~~~~ll 196 (272)
.. .....++......+...+|++.+|+...+ .+++++||||++|.++..+.....++. ...+... .+..+.
T Consensus 77 ~~~~~~~~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~~~~~~~~~a~eve~~l~~~~~~~~~~~my 156 (275)
T PRK00166 77 IKRNKKKDTLDPILEAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQWDLATALALAREVEAVLRSDDYRDFLANMY 156 (275)
T ss_pred CccccchhHHHHHHccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCCCHHHHHHHHHHHHHHhcCCcHHHHHHHhc
Confidence 32 12223332333456688999999998665 568999999999998653322222221 1111111 223344
Q ss_pred ccCCCCCCCCccCCCCCccccCHHHHHH-----HHHHc-----------------------------CCcEEEEcCCCCc
Q 024080 197 WSDPDDRCGWGISPRGAGYTFGQDIASQ-----FNHTN-----------------------------GLSLISRAHQLVM 242 (272)
Q Consensus 197 W~dp~~~~~~~~~~~g~~~~fg~~~~~~-----fl~~~-----------------------------~~~~iirgH~~~~ 242 (272)
|+.| ..|.....|.... ...++. ||... .-..||-||....
T Consensus 157 ~~~p---~~W~~~l~~~~r~--r~~~n~~trmR~~~~~g~l~~~~k~~~~~~~~~~~pWf~~~~~~~~~~~i~fGHwa~l 231 (275)
T PRK00166 157 GNEP---DRWSPDLTGLERL--RYIINAFTRMRFCTPDGRLDFKCKGPPDEAPAGLKPWFEVPGRKTRDYTIVFGHWAAL 231 (275)
T ss_pred CCCc---CccCcccCchHHH--HHHHHHHhhhhcccCCCceeecccCCcccCCcCCCCCccCcCccCCCCeEEEecCccc
Confidence 4433 2455444444322 112222 22221 2347999999887
Q ss_pred cCeeEeCCCeEEEEeccccccc
Q 024080 243 EGYNWCQVWNLKDHASFCFFSH 264 (272)
Q Consensus 243 ~G~~~~~~~~li~i~s~~~~~~ 264 (272)
.|... ...++.+++.|.+|-
T Consensus 232 ~G~~~--~~~~~~LDtGcvwgg 251 (275)
T PRK00166 232 EGLTT--PPNIIALDTGCVWGG 251 (275)
T ss_pred CCccC--CCCeEEeecccccCC
Confidence 78875 677999999998864
No 23
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.96 E-value=1.1e-28 Score=217.56 Aligned_cols=197 Identities=19% Similarity=0.245 Sum_probs=131.3
Q ss_pred CCceeeeCCCCCHHHHHHHHHHcCCC-CCCeEEEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccCcchhhhhhhhC
Q 024080 47 CPVTVCGDIHGQFYDLIELFRIGGNA-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYG 125 (272)
Q Consensus 47 ~~i~viGDIHG~~~~l~~~l~~~~~~-~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~g 125 (272)
|++|||||||||+++|+++|+++++. +.++++|+||+|||||+|++|++++.++ ++++++|+||||.++++...|
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l----~~~~~~VlGNHD~~lL~~~~g 76 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSL----GDAVRLVLGNHDLHLLAVFAG 76 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhc----CCCeEEEEChhHHHHHHHhcC
Confidence 57899999999999999999999865 5788999999999999999999999988 456889999999999987766
Q ss_pred Ch----HHHHHHhCChhHHHHHHHHhhccCceEEEc-CcEEEecCCCCCCCCcHHHHhhccccccC---CCCCccccccc
Q 024080 126 FY----DECLRKYGNANVWKYFTDLFDYLPLTALIE-SQIFCLHGGLSPSLDTLDNIRALDRIQEV---PHEGPMCDLLW 197 (272)
Q Consensus 126 ~~----~e~~~~~~~~~~~~~~~~~~~~lPl~~~~~-~~~l~vHaGi~p~~~~~~~i~~i~r~~~~---~~~~~~~~llW 197 (272)
+. .+....+-.....++..+|++.+|+..... .++++||||++|.|+.........+.+.. +....+..-++
T Consensus 77 ~~~~~~~d~l~~~l~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w~l~~a~~~a~eve~~L~~~~~~~fl~~my 156 (279)
T TIGR00668 77 ISRNKPKDRLDPLLEAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQWDLQTAKECARDVEAVLSSDSYPFFLDAMY 156 (279)
T ss_pred CCccCchHHHHHHHHccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCCcHHHHHHHHHHHHHHHcCCCHHHHHHHhh
Confidence 42 122222223345678899999999986543 47999999999999653333322222222 21112333344
Q ss_pred cCCCCCCCCccCCCCCccccCHHHHHH-----HHHHc-CCcEEEEcC-CCCccCeeEeCCC
Q 024080 198 SDPDDRCGWGISPRGAGYTFGQDIASQ-----FNHTN-GLSLISRAH-QLVMEGYNWCQVW 251 (272)
Q Consensus 198 ~dp~~~~~~~~~~~g~~~~fg~~~~~~-----fl~~~-~~~~iirgH-~~~~~G~~~~~~~ 251 (272)
.+ ....|.+...|..+. +-.++. ||... .+++-.++. +..+.|+.+||+-
T Consensus 157 gn--~p~~W~~~l~g~~r~--r~i~n~~TRmR~c~~~g~ld~~~k~~~~~~p~~~~PWf~~ 213 (279)
T TIGR00668 157 GD--MPNRWSPELQGLARL--RFIINAFTRMRFCFPNGQLDMYSKESPEDAPAPLKPWFAI 213 (279)
T ss_pred CC--CCccCCCCCchHHHH--HHHHHHHhhheeeCCCCCCcccccCCcccCCCCCCCcccC
Confidence 32 123465555554433 222322 33333 344444443 3456777777753
No 24
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.96 E-value=6.8e-28 Score=208.62 Aligned_cols=117 Identities=24% Similarity=0.359 Sum_probs=93.0
Q ss_pred ceeeeCCCCCHHHHHHHHHHcCCC--------CCCeEEEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccCcchhhh
Q 024080 49 VTVCGDIHGQFYDLIELFRIGGNA--------PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQI 120 (272)
Q Consensus 49 i~viGDIHG~~~~l~~~l~~~~~~--------~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~ 120 (272)
.+||||||||+++|.++|+++++. +.+++|||||||||||+|.+|+++++++.. +.++++|+||||.+++
T Consensus 1 ~~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~~--~~~~~~l~GNHE~~ll 78 (222)
T cd07413 1 YDFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVD--AGHALAVMGNHEFNAI 78 (222)
T ss_pred CEEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhhc--CCCEEEEEccCcHHHH
Confidence 379999999999999999999764 467899999999999999999999999864 3479999999999988
Q ss_pred hhhhCC------h-----------HHHHHHhC-ChhHHHHHHHHhhccCceEEEcCcEEEecCCCC
Q 024080 121 TQVYGF------Y-----------DECLRKYG-NANVWKYFTDLFDYLPLTALIESQIFCLHGGLS 168 (272)
Q Consensus 121 ~~~~g~------~-----------~e~~~~~~-~~~~~~~~~~~~~~lPl~~~~~~~~l~vHaGi~ 168 (272)
....+. . .+..+.++ .....+...+||+.||+.... ++++|||||+.
T Consensus 79 ~~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~lP~~~~~-~~~~~VHAg~~ 143 (222)
T cd07413 79 AWHTKDPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHKDWLEWFKTLPLFLDL-GGVRVVHACWD 143 (222)
T ss_pred HhhhCCcccchhhhcCCCcccccHHHHHHHHhccchhHHHHHHHHhcCCcEEEE-CCEEEEECCcC
Confidence 643221 0 12233332 234457789999999998764 78999999985
No 25
>PHA02239 putative protein phosphatase
Probab=99.96 E-value=1.2e-27 Score=208.25 Aligned_cols=177 Identities=23% Similarity=0.320 Sum_probs=129.9
Q ss_pred CCceeeeCCCCCHHHHHHHHHHcCCC--CCCeEEEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccCcchhhhhhhh
Q 024080 47 CPVTVCGDIHGQFYDLIELFRIGGNA--PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVY 124 (272)
Q Consensus 47 ~~i~viGDIHG~~~~l~~~l~~~~~~--~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~ 124 (272)
|++++|||||||++.|.++++.+... +.+.+||+|||||||++|.++++.++++.. .+.++++|+||||.++++...
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~~-~~~~~~~l~GNHE~~~l~~~~ 79 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLMS-NDDNVVTLLGNHDDEFYNIME 79 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHhh-cCCCeEEEECCcHHHHHHHHh
Confidence 57899999999999999999998532 468899999999999999999999998754 345799999999999775431
Q ss_pred C--------------ChHHHHHHhCCh------------------------------hHHHHHHHHhhccCceEEEcCcE
Q 024080 125 G--------------FYDECLRKYGNA------------------------------NVWKYFTDLFDYLPLTALIESQI 160 (272)
Q Consensus 125 g--------------~~~e~~~~~~~~------------------------------~~~~~~~~~~~~lPl~~~~~~~~ 160 (272)
+ ...+++.+|+.. ..+..+..|+++||+... .+++
T Consensus 80 ~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~-~~~~ 158 (235)
T PHA02239 80 NVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYK-EDKY 158 (235)
T ss_pred CchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEE-ECCE
Confidence 1 112444566421 122455669999999866 4789
Q ss_pred EEecCCCCCCCCcHHHHhhccccccCCCCCccccccccCCCCCCCCccCCCCCccccCHHHHHHHHHHcCCcEEEEcCCC
Q 024080 161 FCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQL 240 (272)
Q Consensus 161 l~vHaGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~~~~~~~~~~g~~~~fg~~~~~~fl~~~~~~~iirgH~~ 240 (272)
+|||||+.|..+..+|. ..+++|.++ | .++. .-+.||.||||
T Consensus 159 ifVHAGi~p~~~~~~q~--------------~~~llWiR~-----f--~~~~-----------------~g~~vV~GHTp 200 (235)
T PHA02239 159 IFSHSGGVSWKPVEEQT--------------IDQLIWSRD-----F--QPRK-----------------DGFTYVCGHTP 200 (235)
T ss_pred EEEeCCCCCCCChhhCC--------------HhHeEEecc-----c--CCCC-----------------CCcEEEECCCC
Confidence 99999999886533332 268999952 3 1111 12478999999
Q ss_pred CccCeeEeCCCeEEEEeccccccc
Q 024080 241 VMEGYNWCQVWNLKDHASFCFFSH 264 (272)
Q Consensus 241 ~~~G~~~~~~~~li~i~s~~~~~~ 264 (272)
+.++.... .++.|.|+..|+||.
T Consensus 201 ~~~~~~~~-~~~~I~IDtGa~~g~ 223 (235)
T PHA02239 201 TDSGEVEI-NGDMLMCDVGAVFRN 223 (235)
T ss_pred CCCCcccc-cCCEEEeecCccccC
Confidence 97665433 355689999999873
No 26
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.95 E-value=1.9e-27 Score=207.46 Aligned_cols=123 Identities=23% Similarity=0.452 Sum_probs=98.1
Q ss_pred CCceeeeCCCCCHHHHHHHHHHcCCCC----------CCeEEEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccCcc
Q 024080 47 CPVTVCGDIHGQFYDLIELFRIGGNAP----------DTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHE 116 (272)
Q Consensus 47 ~~i~viGDIHG~~~~l~~~l~~~~~~~----------~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE 116 (272)
||++||||||||+.+|+++|+++++.+ .+++|||||||||||+|.+|++++++++. +.++++|+||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~--~~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVA--AGAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhh--CCcEEEEECCcH
Confidence 589999999999999999999997642 46899999999999999999999998865 347999999999
Q ss_pred hhhhhhhhCC-------hHHHHHHhC--ChhHHHHHHHHhhccCceEEEc-CcEEEecCCCCCCC
Q 024080 117 SRQITQVYGF-------YDECLRKYG--NANVWKYFTDLFDYLPLTALIE-SQIFCLHGGLSPSL 171 (272)
Q Consensus 117 ~~~~~~~~g~-------~~e~~~~~~--~~~~~~~~~~~~~~lPl~~~~~-~~~l~vHaGi~p~~ 171 (272)
.++++...+. ..++...+. ...+.+...+||+.||+...++ ++++|||||+++..
T Consensus 79 ~~l~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~~ 143 (234)
T cd07423 79 NKLYRKLQGRNVKITHGLEETVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEEM 143 (234)
T ss_pred HHHHHHhcCCCccccCcccchHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChHh
Confidence 9988754321 122233332 2356678889999999987664 57999999987643
No 27
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.95 E-value=1.5e-27 Score=209.91 Aligned_cols=123 Identities=24% Similarity=0.337 Sum_probs=100.3
Q ss_pred ceeeeCCCCCHHHHHHHHHHcCCC-CCCeEEEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccCcchhhhhhhhCCh
Q 024080 49 VTVCGDIHGQFYDLIELFRIGGNA-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFY 127 (272)
Q Consensus 49 i~viGDIHG~~~~l~~~l~~~~~~-~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~g~~ 127 (272)
++||||||||+++|+++|+++++. +.+++||+||+|||||+|.||++++++++ .++++|+||||.++++..++..
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~ 76 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIK 76 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCcc
Confidence 589999999999999999999865 57899999999999999999999999984 4799999999999887655532
Q ss_pred H----HHHHHhCChhHHHHHHHHhhccCceEEEcC-cEEEecCCCCCCCCcHH
Q 024080 128 D----ECLRKYGNANVWKYFTDLFDYLPLTALIES-QIFCLHGGLSPSLDTLD 175 (272)
Q Consensus 128 ~----e~~~~~~~~~~~~~~~~~~~~lPl~~~~~~-~~l~vHaGi~p~~~~~~ 175 (272)
. +...++-.....++..+|++++|+....++ ++++||||++|.|+..+
T Consensus 77 ~~~~~~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w~~~~ 129 (257)
T cd07422 77 KPKKKDTLDDILNAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQWSIEQ 129 (257)
T ss_pred ccccHhHHHHHHhccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCCCHHH
Confidence 1 222222223344678899999999887754 89999999999986533
No 28
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.95 E-value=5.2e-27 Score=207.34 Aligned_cols=189 Identities=20% Similarity=0.203 Sum_probs=132.2
Q ss_pred CCceeeeCCCCCHHHHHHHHHHcCCC------CCCeEEEecCccCCCCCcHHHHHHHHHhhHhcCC-cEEEEccCcchhh
Q 024080 47 CPVTVCGDIHGQFYDLIELFRIGGNA------PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRD-RITILRGNHESRQ 119 (272)
Q Consensus 47 ~~i~viGDIHG~~~~l~~~l~~~~~~------~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~-~v~~lrGNHE~~~ 119 (272)
.++++||||||+++.|+++++.+... ..+.+|||||||||||+|.+|++++++++..+|. ++++|+||||.++
T Consensus 2 ~~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~ 81 (304)
T cd07421 2 RVVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAF 81 (304)
T ss_pred ceEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHH
Confidence 47999999999999999999876421 2457999999999999999999999999888875 6899999999887
Q ss_pred hhhhhC-----------------------------------------C----------------------hHHHHHHhCC
Q 024080 120 ITQVYG-----------------------------------------F----------------------YDECLRKYGN 136 (272)
Q Consensus 120 ~~~~~g-----------------------------------------~----------------------~~e~~~~~~~ 136 (272)
+..... + ..++..+||-
T Consensus 82 l~fL~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl~SYGv 161 (304)
T cd07421 82 AAFLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFENMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYGV 161 (304)
T ss_pred HhHhhcCCCccchhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccCcHHHHHHcCC
Confidence 643211 0 1244555652
Q ss_pred h--------hHHHHHHHHhhccCceEEEcCcE-------------EEecCCCCCCCCcHHHHhhcc-ccccCCCCCcccc
Q 024080 137 A--------NVWKYFTDLFDYLPLTALIESQI-------------FCLHGGLSPSLDTLDNIRALD-RIQEVPHEGPMCD 194 (272)
Q Consensus 137 ~--------~~~~~~~~~~~~lPl~~~~~~~~-------------l~vHaGi~p~~~~~~~i~~i~-r~~~~~~~~~~~~ 194 (272)
. .+.+...+|++.||..... +++ +|||||+.|+.+.-+|.+.+. +....|. .+
T Consensus 162 ~~~~~~l~~avP~~H~~fl~~l~~~~~~-~~~~~~~~~g~~~~~lifVHAGlrPg~pLe~Q~~~L~~~d~~~p~----~~ 236 (304)
T cd07421 162 PHGSSDLIKAVPEEHKKFLRNLVWVHEE-DDVCIETEEGLKHCKLIAVHAGLEKSNSVEEQLKLLRTKDTSIPK----IA 236 (304)
T ss_pred CcchHHHHHhCCHHHHHHHHhCCceEEe-CcccccccccccccceEEEEcccCCCCChHHhhhhhhcccccccc----cc
Confidence 2 2345688999999998664 556 999999999999888877643 2233332 48
Q ss_pred ccccCCCCCCCCccCCCCCccccCHHHHHHHHHHcCCcEEEEcCCCCccCeeEeCCCeEEEEecccccc
Q 024080 195 LLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQVWNLKDHASFCFFS 263 (272)
Q Consensus 195 llW~dp~~~~~~~~~~~g~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~li~i~s~~~~~ 263 (272)
++|.+ ..|...++... ..-.+||.||+.. +...+.=+.|+..++++
T Consensus 237 ~l~~R----~~f~~~~~~~~--------------~~~~~VVhGHt~~-----~~~~~~Ri~iDtGa~~~ 282 (304)
T cd07421 237 PLSGR----KNVWNIPQELA--------------DKKTIVVSGHHGK-----LHIDGLRLIIDEGGGFD 282 (304)
T ss_pred ccccc----hhhhcCccccc--------------CCCeEEEECCCCC-----ceecCCEEEEECCCCcC
Confidence 89985 32222222220 0116799999932 33444445556655553
No 29
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.95 E-value=4.9e-27 Score=202.74 Aligned_cols=179 Identities=20% Similarity=0.226 Sum_probs=120.9
Q ss_pred CCceeeeCCCCCHHHHHHHHHHcCCC-CCCeEEEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccCcchhhhhhhhC
Q 024080 47 CPVTVCGDIHGQFYDLIELFRIGGNA-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYG 125 (272)
Q Consensus 47 ~~i~viGDIHG~~~~l~~~l~~~~~~-~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~g 125 (272)
+|++||||||||+++|+++|+++++. ..++++||||+|||||+|.+|++++.+. ++++|+||||.++++...+
T Consensus 17 ~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~~------~~~~v~GNHE~~~l~~~~~ 90 (218)
T PRK11439 17 RHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEEH------WVRAVRGNHEQMALDALAS 90 (218)
T ss_pred CeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHcC------CceEeeCchHHHHHHHHHC
Confidence 58999999999999999999999876 5788999999999999999999999753 5789999999999875432
Q ss_pred ChHHHHHHhC--------C--hhHHHHHHHHhhccCceEEE---cCcEEEecCCCCCCCCcHHHHhhccccccCCCCCcc
Q 024080 126 FYDECLRKYG--------N--ANVWKYFTDLFDYLPLTALI---ESQIFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPM 192 (272)
Q Consensus 126 ~~~e~~~~~~--------~--~~~~~~~~~~~~~lPl~~~~---~~~~l~vHaGi~p~~~~~~~i~~i~r~~~~~~~~~~ 192 (272)
.....+...+ . ........+|+++||+...+ ++++++||||++... . +... +. ..
T Consensus 91 ~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p~~~-~-~~~~----~~------~~ 158 (218)
T PRK11439 91 QQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYPADV-Y-EWQK----DV------DL 158 (218)
T ss_pred CccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCCCCc-h-hhhc----cC------Cc
Confidence 1111111111 1 12345667899999998654 357999999984322 1 1110 00 12
Q ss_pred ccccccCCCCCCCCccCCCCCccccCHHHHHHHHHHcCCcEEEEcCCCCccCeeEeCCCeEEEEecccccc
Q 024080 193 CDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQVWNLKDHASFCFFS 263 (272)
Q Consensus 193 ~~llW~dp~~~~~~~~~~~g~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~li~i~s~~~~~ 263 (272)
.+++|.++.....+ .+. ...+.+.+|.|||+++.... .+..+.|+..|.||
T Consensus 159 ~~~~w~r~~~~~~~----~~~-------------~~~~~~~vv~GHT~~~~~~~---~~~~i~IDtGav~g 209 (218)
T PRK11439 159 HQVLWSRSRLGERQ----KGQ-------------GITGADHFWFGHTPLRHRVD---IGNLHYIDTGAVFG 209 (218)
T ss_pred cceEEcChhhhhcc----ccc-------------cccCCCEEEECCccCCCccc---cCCEEEEECCCCCC
Confidence 45788743211110 000 11255689999999875442 34567888777775
No 30
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.93 E-value=9.9e-25 Score=186.88 Aligned_cols=183 Identities=20% Similarity=0.268 Sum_probs=122.6
Q ss_pred CCceeeeCCCCCHHHHHHHHHHcCCC-CCCeEEEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccCcchhhhhhhhC
Q 024080 47 CPVTVCGDIHGQFYDLIELFRIGGNA-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYG 125 (272)
Q Consensus 47 ~~i~viGDIHG~~~~l~~~l~~~~~~-~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~g 125 (272)
+|+++|||||||+.+|+++++.++.. ..+.++++||+|||||++.++++++.+ .++++|+||||.+.+....+
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~~ 74 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALRA 74 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhhC
Confidence 47999999999999999999998764 578899999999999999999998875 26899999999998876543
Q ss_pred --ChHHHHHHhCC--------hhHHHHHHHHhhccCceEEEc---CcEEEecCCCCCCCCcHHHHhhccccccCCCCCcc
Q 024080 126 --FYDECLRKYGN--------ANVWKYFTDLFDYLPLTALIE---SQIFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPM 192 (272)
Q Consensus 126 --~~~e~~~~~~~--------~~~~~~~~~~~~~lPl~~~~~---~~~l~vHaGi~p~~~~~~~i~~i~r~~~~~~~~~~ 192 (272)
...+.+...+. ....+...+|++.||+...+. .++++||||+++.... .... + +.......
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~~~-~~~~---~--~~~~~~~~ 148 (207)
T cd07424 75 EPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDDWS-DGVG---A--VTLRPEDI 148 (207)
T ss_pred CCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcchhh-hhhh---c--cccCcccc
Confidence 12223233322 124556788999999987763 4799999998654321 1110 0 11112234
Q ss_pred ccccccCCCCCCCCccCCCCCccccCHHHHHHHHHHcCCcEEEEcCCCCccCeeEeCCCeEEEEeccccc
Q 024080 193 CDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQVWNLKDHASFCFF 262 (272)
Q Consensus 193 ~~llW~dp~~~~~~~~~~~g~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~li~i~s~~~~ 262 (272)
.+++|++|. |.... +....+.+.||.|||+++..+.. ++ .+.+...|.+
T Consensus 149 ~~~~w~~~~----~~~~~--------------~~~~~~~~~iV~GHTh~~~~~~~--~~-~i~ID~Gsv~ 197 (207)
T cd07424 149 EELLWSRTR----IQKAQ--------------TQPIKGVDAVVHGHTPVKRPLRL--GN-VLYIDTGAVF 197 (207)
T ss_pred eeeeeccch----hhhcC--------------ccccCCCCEEEECCCCCCcceEE--CC-EEEEECCCCC
Confidence 678888542 11100 00011447899999998765443 33 4555555554
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.91 E-value=1.2e-23 Score=181.63 Aligned_cols=116 Identities=21% Similarity=0.224 Sum_probs=87.0
Q ss_pred CCceeeeCCCCCHHHHHHHHHHcCCC-CCCeEEEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccCcchhhhhhhhC
Q 024080 47 CPVTVCGDIHGQFYDLIELFRIGGNA-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYG 125 (272)
Q Consensus 47 ~~i~viGDIHG~~~~l~~~l~~~~~~-~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~g 125 (272)
.|++||||||||+++|+++++.+.+. ..++++++||+|||||+|.+|++++.+ .++++|+||||.++++....
T Consensus 15 ~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~~~~~~ 88 (218)
T PRK09968 15 RHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMALDAFET 88 (218)
T ss_pred CeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHHHHHhc
Confidence 48999999999999999999998754 568899999999999999999998864 26899999999998865421
Q ss_pred ChH--------HHHHHhCCh--hHHHHHHHHhhccCceEEEc---CcEEEecCCCC
Q 024080 126 FYD--------ECLRKYGNA--NVWKYFTDLFDYLPLTALIE---SQIFCLHGGLS 168 (272)
Q Consensus 126 ~~~--------e~~~~~~~~--~~~~~~~~~~~~lPl~~~~~---~~~l~vHaGi~ 168 (272)
-.. +........ ........|+++||+...+. +++++||||++
T Consensus 89 ~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p 144 (218)
T PRK09968 89 GDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYP 144 (218)
T ss_pred CChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCC
Confidence 111 111111111 12234456899999887552 47999999983
No 32
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.50 E-value=3.6e-13 Score=107.90 Aligned_cols=160 Identities=19% Similarity=0.183 Sum_probs=101.7
Q ss_pred CCceeeeCCCCCHHHH----HHHHHHcCCCCCCeEEEecCccCCCCCcHHHHHHH--HHhhHhcCCcEEEEccCcchhhh
Q 024080 47 CPVTVCGDIHGQFYDL----IELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLL--VALKVRYRDRITILRGNHESRQI 120 (272)
Q Consensus 47 ~~i~viGDIHG~~~~l----~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l--~~l~~~~p~~v~~lrGNHE~~~~ 120 (272)
+||++|||+|+..... ..+.+.....+.+.+|++||++++|..+.+..... .......+..+++++||||....
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~ 80 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSG 80 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhcccccccccccccccee
Confidence 4789999999999987 44444445567788999999999999988877654 33444456689999999999976
Q ss_pred hhhhCChHHHHH---------------------------------HhCChhHHHHHHHHhhccCceEEEcCcEEEecCCC
Q 024080 121 TQVYGFYDECLR---------------------------------KYGNANVWKYFTDLFDYLPLTALIESQIFCLHGGL 167 (272)
Q Consensus 121 ~~~~g~~~e~~~---------------------------------~~~~~~~~~~~~~~~~~lPl~~~~~~~~l~vHaGi 167 (272)
............ .............+.............++++|.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~H~p~ 160 (200)
T PF00149_consen 81 NSFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVFTHHPP 160 (200)
T ss_dssp HHHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEEESSSS
T ss_pred ccccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcccccccccccccccceeEEEecCC
Confidence 432211111100 00001111222222322333333456899999998
Q ss_pred CCCCCcHHHHhhccccccCCCCCccccccccCCCCCCCCccCCCCCccccCHHHHHHHHHHcCCcEEEEcCCCC
Q 024080 168 SPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLV 241 (272)
Q Consensus 168 ~p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~~~~~~~~~~g~~~~fg~~~~~~fl~~~~~~~iirgH~~~ 241 (272)
.+........ .....+...+..+++..++++++.||+..
T Consensus 161 ~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~v~~~~~GH~H~ 199 (200)
T PF00149_consen 161 YSSSSDSSSY-----------------------------------GNESKGREALEELLKKYNVDLVLSGHTHR 199 (200)
T ss_dssp STTSSSTHHH-----------------------------------SSEEEHHHHHHHHHHHTTCSEEEEESSSS
T ss_pred CCcccccccc-----------------------------------chhhccHHHHHHHHhhCCCCEEEeCceec
Confidence 7654332111 12234577888999999999999999864
No 33
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.28 E-value=5.2e-11 Score=96.87 Aligned_cols=83 Identities=27% Similarity=0.404 Sum_probs=63.0
Q ss_pred CceeeeCCCCCHHHHHHHHHHcCCCCCCeEEEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccCcchhhhhhhhCCh
Q 024080 48 PVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFY 127 (272)
Q Consensus 48 ~i~viGDIHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~g~~ 127 (272)
|+.++||+||+...+.++++.+.. .+.++++||++++++.+. ++. ...+++++||||....
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~--------~~~--~~~~~~V~GNhD~~~~------- 61 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE--------LEL--KAPVIAVRGNCDGEVD------- 61 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch--------hhc--CCcEEEEeCCCCCcCC-------
Confidence 578999999999999999998755 688999999999998765 111 3369999999998632
Q ss_pred HHHHHHhCChhHHHHHHHHhhccCceEEE--c-CcEEEecCCCC
Q 024080 128 DECLRKYGNANVWKYFTDLFDYLPLTALI--E-SQIFCLHGGLS 168 (272)
Q Consensus 128 ~e~~~~~~~~~~~~~~~~~~~~lPl~~~~--~-~~~l~vHaGi~ 168 (272)
+..+|....+ + .+++++||...
T Consensus 62 -------------------~~~~p~~~~~~~~g~~i~v~Hg~~~ 86 (155)
T cd00841 62 -------------------FPILPEEAVLEIGGKRIFLTHGHLY 86 (155)
T ss_pred -------------------cccCCceEEEEECCEEEEEECCccc
Confidence 3445543332 2 37999999864
No 34
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.27 E-value=5.7e-11 Score=97.26 Aligned_cols=63 Identities=17% Similarity=0.191 Sum_probs=51.1
Q ss_pred CCceeeeCCCCCHHHHHHHHHHcCCC-CCCeEEEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccCcchh
Q 024080 47 CPVTVCGDIHGQFYDLIELFRIGGNA-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESR 118 (272)
Q Consensus 47 ~~i~viGDIHG~~~~l~~~l~~~~~~-~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 118 (272)
|++.+|||+||++.++..+++.+... +.+.++++||++ +.++++.+.++ ...++.++||||..
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~----~~~~~~V~GN~D~~ 64 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT-----SPFVLKEFEDL----AAKVIAVRGNNDGE 64 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC-----CHHHHHHHHHh----CCceEEEccCCCch
Confidence 58999999999998888777776655 678899999998 46777777655 22599999999984
No 35
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.26 E-value=5.8e-11 Score=96.01 Aligned_cols=140 Identities=19% Similarity=0.228 Sum_probs=87.6
Q ss_pred CCceeeeCCCCCHHHHHHHHHHcCCCCCCeEEEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccCcchhhhhhhhCC
Q 024080 47 CPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGF 126 (272)
Q Consensus 47 ~~i~viGDIHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~g~ 126 (272)
||++++||+|++..++.++++.+ .+.+.++++||++++ .++++.+... .+++++||||..........
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~~~~~~~~ 68 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP----EEVLELLRDI------PVYVVRGNHDNWAFPNENDE 68 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH----HHHHHHHHHH------EEEEE--CCHSTHHHSEECT
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH----HHHHHHHhcC------CEEEEeCCcccccchhhhhc
Confidence 68999999999999999999998 347788999999993 7777777555 59999999997653322110
Q ss_pred hHHHHHHhCChhHHHHHHHHhhccCceEEEcCcEEEecCCCCCCCCcHHHHhhccccccCCCCCccccccccCCCCCCCC
Q 024080 127 YDECLRKYGNANVWKYFTDLFDYLPLTALIESQIFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGW 206 (272)
Q Consensus 127 ~~e~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~l~vHaGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~~~~~ 206 (272)
.. +....... ....+++++||.+..-
T Consensus 69 -----------~~------~~~~~~~~-~~~~~i~~~H~~~~~~------------------------------------ 94 (156)
T PF12850_consen 69 -----------EY------LLDALRLT-IDGFKILLSHGHPYDV------------------------------------ 94 (156)
T ss_dssp -----------CS------SHSEEEEE-ETTEEEEEESSTSSSS------------------------------------
T ss_pred -----------cc------cccceeee-ecCCeEEEECCCCccc------------------------------------
Confidence 00 11222211 1145899999976430
Q ss_pred ccCCCCCccccCHHHHHHHHHHcCCcEEEEcCCCCccCeeEeCCC-eEEEEecccccc
Q 024080 207 GISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQVW-NLKDHASFCFFS 263 (272)
Q Consensus 207 ~~~~~g~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~-~li~i~s~~~~~ 263 (272)
..+.+.+.+.+...++++++.||+-.+.-.+ .++ .++..-|.+...
T Consensus 95 ---------~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~--~~~~~~~~~Gs~~~~~ 141 (156)
T PF12850_consen 95 ---------QWDPAELREILSRENVDLVLHGHTHRPQVFK--IGGIHVINPGSIGGPR 141 (156)
T ss_dssp ---------TTTHHHHHHHHHHTTSSEEEESSSSSEEEEE--ETTEEEEEE-GSSS-S
T ss_pred ---------ccChhhhhhhhcccCCCEEEcCCcccceEEE--ECCEEEEECCcCCCCC
Confidence 0224455667778899999999987644333 344 445555555443
No 36
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=99.26 E-value=7e-11 Score=102.73 Aligned_cols=156 Identities=18% Similarity=0.194 Sum_probs=97.8
Q ss_pred CceeeeCCCCCHHHHHHHHHHcCCCCCCeEEEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccCcchhhhhh----h
Q 024080 48 PVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQ----V 123 (272)
Q Consensus 48 ~i~viGDIHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~----~ 123 (272)
+|+++|||||++.... .+.+...+.|.++++||+++ .+.++++.+.++ +..+++++||||.+.... .
T Consensus 2 rIa~isDiHg~~~~~~--~~~l~~~~pD~Vl~~GDi~~---~~~~~~~~l~~l----~~p~~~V~GNHD~~~~~~~~~k~ 72 (238)
T cd07397 2 RIAIVGDVHGQWDLED--IKALHLLQPDLVLFVGDFGN---ESVQLVRAISSL----PLPKAVILGNHDAWYDATFRKKG 72 (238)
T ss_pred EEEEEecCCCCchHHH--HHHHhccCCCEEEECCCCCc---ChHHHHHHHHhC----CCCeEEEcCCCcccccccccchH
Confidence 6899999999987642 22333345688999999976 456777777665 345899999999865320 0
Q ss_pred ----------------h----------------C--------ChH-HHHHHhCChhHHHHHHHHhhccCceEEEcCcEEE
Q 024080 124 ----------------Y----------------G--------FYD-ECLRKYGNANVWKYFTDLFDYLPLTALIESQIFC 162 (272)
Q Consensus 124 ----------------~----------------g--------~~~-e~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~l~ 162 (272)
+ + +.. ++...|+..+..+.+...++.++.......++++
T Consensus 73 ~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~~~~~~~Vli 152 (238)
T cd07397 73 DRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKAPPDLPLILL 152 (238)
T ss_pred HHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhcCCCCCeEEE
Confidence 0 0 011 4555666666777888888888633333458999
Q ss_pred ecCCCCCCCCcHHHHhhccccccCCCCCccccccccCCCCCCCCccCCCCCccccCHHHHHHHHHHcC----CcEEEEcC
Q 024080 163 LHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNG----LSLISRAH 238 (272)
Q Consensus 163 vHaGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~~~~~~~~~~g~~~~fg~~~~~~fl~~~~----~~~iirgH 238 (272)
.|+++.-..+..+.+ | ...|... +.-+|...+++.+.... .++++-||
T Consensus 153 aH~~~~G~g~~~~~~---------------c---------g~d~~~~----~~~~G~~~l~~ai~~~~~~~~~~l~~fGH 204 (238)
T cd07397 153 AHNGPSGLGSDAEDP---------------C---------GRDWKPP----GGDWGDPDLALAISQIQQGRQVPLVVFGH 204 (238)
T ss_pred eCcCCcCCCcccccc---------------c---------ccccCCc----CCCCCCHHHHHHHHHHhccCCCCEEEeCC
Confidence 999986443221110 1 1123221 12356677766665543 79999999
Q ss_pred CC
Q 024080 239 QL 240 (272)
Q Consensus 239 ~~ 240 (272)
--
T Consensus 205 ~H 206 (238)
T cd07397 205 MH 206 (238)
T ss_pred cc
Confidence 43
No 37
>PRK09453 phosphodiesterase; Provisional
Probab=99.21 E-value=2.6e-11 Score=101.63 Aligned_cols=69 Identities=22% Similarity=0.301 Sum_probs=57.6
Q ss_pred CCceeeeCCCCCHHHHHHHHHHcCCCCCCeEEEecCccCCCCC--------cHHHHHHHHHhhHhcCCcEEEEccCcchh
Q 024080 47 CPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYY--------SVETVTLLVALKVRYRDRITILRGNHESR 118 (272)
Q Consensus 47 ~~i~viGDIHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~--------s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 118 (272)
||+.+|||+||++.+++++++.+...+.+.++++||++|+|+. +.++++.+.++ ...+++++||||..
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~----~~~v~~V~GNhD~~ 76 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY----ADKIIAVRGNCDSE 76 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc----CCceEEEccCCcch
Confidence 6899999999999999999998866677899999999999874 45677766654 34699999999975
Q ss_pred h
Q 024080 119 Q 119 (272)
Q Consensus 119 ~ 119 (272)
.
T Consensus 77 ~ 77 (182)
T PRK09453 77 V 77 (182)
T ss_pred h
Confidence 4
No 38
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.19 E-value=1.3e-10 Score=92.57 Aligned_cols=119 Identities=18% Similarity=0.140 Sum_probs=80.4
Q ss_pred CceeeeCCCCCHHHHHHHHHHcCCCCCCeEEEecCccCCCCCcH--HHHHHHHHhhHhcCCcEEEEccCcchhhhhhhhC
Q 024080 48 PVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSV--ETVTLLVALKVRYRDRITILRGNHESRQITQVYG 125 (272)
Q Consensus 48 ~i~viGDIHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~--evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~g 125 (272)
+++++||+||++. .+...+.+.+|++||+++++..+. +.++++.++. .| .+++++||||....
T Consensus 1 ~i~~isD~H~~~~-------~~~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~~-~~~~v~GNHD~~~~----- 65 (135)
T cd07379 1 RFVCISDTHSRHR-------TISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLP--HP-HKIVIAGNHDLTLD----- 65 (135)
T ss_pred CEEEEeCCCCCCC-------cCcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhCC--CC-eEEEEECCCCCcCC-----
Confidence 5789999999987 123355678899999999886532 3455555442 12 36789999996421
Q ss_pred ChHHHHHHhCChhHHHHHHHHhhccCceEEEcCcEEEecCCCCCCCCcHHHHhhccccccCCCCCccccccccCCCCCCC
Q 024080 126 FYDECLRKYGNANVWKYFTDLFDYLPLTALIESQIFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCG 205 (272)
Q Consensus 126 ~~~e~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~l~vHaGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~~~~ 205 (272)
.-+.+++++||.+.+.... .+ .
T Consensus 66 -----------------------------~~~~~ilv~H~~p~~~~~~----------------------~~-------~ 87 (135)
T cd07379 66 -----------------------------PEDTDILVTHGPPYGHLDL----------------------VS-------S 87 (135)
T ss_pred -----------------------------CCCCEEEEECCCCCcCccc----------------------cc-------c
Confidence 1145789999965321100 00 0
Q ss_pred CccCCCCCccccCHHHHHHHHHHcCCcEEEEcCCCCccCeeE
Q 024080 206 WGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNW 247 (272)
Q Consensus 206 ~~~~~~g~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~ 247 (272)
....|...+.+++++.+.++++.||+-.+.|++.
T Consensus 88 --------~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~~ 121 (135)
T cd07379 88 --------GQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAER 121 (135)
T ss_pred --------CcccCCHHHHHHHHHHCCcEEEEcCcCCcCceeE
Confidence 1134567788888899999999999999888873
No 39
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.94 E-value=1.6e-08 Score=78.03 Aligned_cols=118 Identities=25% Similarity=0.322 Sum_probs=83.7
Q ss_pred eeeeCCCCCHHHHHHHH--HHcCCCCCCeEEEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccCcchhhhhhhhCCh
Q 024080 50 TVCGDIHGQFYDLIELF--RIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFY 127 (272)
Q Consensus 50 ~viGDIHG~~~~l~~~l--~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~g~~ 127 (272)
+++||+|+......... ......+.+.+|++||+++.+....+...............++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD----------- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD----------- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce-----------
Confidence 47999999999988765 44445666888999999999888777554422222333457999999999
Q ss_pred HHHHHHhCChhHHHHHHHHhhccCceEEEcCcEEEecCCCCCCCCcHHHHhhccccccCCCCCccccccccCCCCCCCCc
Q 024080 128 DECLRKYGNANVWKYFTDLFDYLPLTALIESQIFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWG 207 (272)
Q Consensus 128 ~e~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~l~vHaGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~~~~~~ 207 (272)
++++|+.+.+.........
T Consensus 70 --------------------------------i~~~H~~~~~~~~~~~~~~----------------------------- 88 (131)
T cd00838 70 --------------------------------ILLTHGPPYDPLDELSPDE----------------------------- 88 (131)
T ss_pred --------------------------------EEEeccCCCCCchhhcccc-----------------------------
Confidence 8999999854432110000
Q ss_pred cCCCCCccccCHHHHHHHHHHcCCcEEEEcCCCCccCeeE
Q 024080 208 ISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNW 247 (272)
Q Consensus 208 ~~~~g~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~ 247 (272)
..........+...+.+.++.||+.....+..
T Consensus 89 --------~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~~ 120 (131)
T cd00838 89 --------DPGSEALLELLEKYGVDLVLSGHTHVYERREP 120 (131)
T ss_pred --------hhhHHHHHHHHHHhCCCEEEeCCeeccccccC
Confidence 00466777788889999999999887666553
No 40
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=98.91 E-value=3.1e-09 Score=91.99 Aligned_cols=71 Identities=11% Similarity=0.147 Sum_probs=59.2
Q ss_pred CCceeeeCCCCCHHHHHHHHHHcCCCCCCeEEEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccCcchh
Q 024080 47 CPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESR 118 (272)
Q Consensus 47 ~~i~viGDIHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 118 (272)
+++.++||+||++..++++++.+...+.+.+|++||++++|+...++..++..+... +..+++++||||..
T Consensus 5 ~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~l-~~pv~~V~GNhD~~ 75 (224)
T cd07388 5 RYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGEA-HLPTFYVPGPQDAP 75 (224)
T ss_pred eEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc-CCceEEEcCCCChH
Confidence 579999999999999999999876667788999999999998777777766666432 23599999999986
No 41
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.88 E-value=1.6e-07 Score=78.10 Aligned_cols=65 Identities=22% Similarity=0.292 Sum_probs=48.0
Q ss_pred ceeeeCCCCCHHHHHHHHHHcCCCCCCeEEEecCccCCCCCc-HHHHHHHHHhhHhcCCcEEEEccCcchhh
Q 024080 49 VTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYS-VETVTLLVALKVRYRDRITILRGNHESRQ 119 (272)
Q Consensus 49 i~viGDIHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s-~evl~~l~~l~~~~p~~v~~lrGNHE~~~ 119 (272)
|+++||+||++..+.. ..+...+.+.+|++||++++|... .+.++.+.++ +..++++.||||...
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~l~~~----~~p~~~v~GNHD~~~ 66 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEADAVIVAGDITNFGGKEAAVEINLLLAI----GVPVLAVPGNCDTPE 66 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCCEEEECCCccCcCCHHHHHHHHHHHhc----CCCEEEEcCCCCCHH
Confidence 5789999999999877 334445668899999999998763 3333444333 446999999999754
No 42
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.85 E-value=3.8e-08 Score=82.36 Aligned_cols=62 Identities=24% Similarity=0.325 Sum_probs=42.9
Q ss_pred CceeeeCCC-CCHH-HHH-HHHHHcCCCCCCeEEEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccCcchh
Q 024080 48 PVTVCGDIH-GQFY-DLI-ELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESR 118 (272)
Q Consensus 48 ~i~viGDIH-G~~~-~l~-~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 118 (272)
+|.||||.| |.-. .+. .+++.+...+.+.++.+||+++ .++++++..+. ..++.++||||..
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~~~~d~iih~GDi~~-----~~~~~~l~~~~----~~~~~V~GN~D~~ 65 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVPGKIQHVLCTGNLCS-----KETYDYLKTIA----PDVHIVRGDFDEN 65 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhccCCCCEEEECCCCCC-----HHHHHHHHhhC----CceEEEECCCCcc
Confidence 478999999 6533 111 2333333345678999999987 67888776652 2589999999974
No 43
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.78 E-value=3.7e-08 Score=86.27 Aligned_cols=71 Identities=18% Similarity=0.244 Sum_probs=48.6
Q ss_pred CCceeeeCCCCCH------HHHHHHHHHcCCCCCCeEEEecCccCC--C-----CCcHHHHHHHHHhhHhcCCcEEEEcc
Q 024080 47 CPVTVCGDIHGQF------YDLIELFRIGGNAPDTNYLFMGDYVDR--G-----YYSVETVTLLVALKVRYRDRITILRG 113 (272)
Q Consensus 47 ~~i~viGDIHG~~------~~l~~~l~~~~~~~~~~~vflGD~vDr--G-----~~s~evl~~l~~l~~~~p~~v~~lrG 113 (272)
|++++|||+|... ..+.+.++.. ..+.+.++++||++|. | +...++++.+..++.. +..++++.|
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~-~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~-g~~v~~v~G 78 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGE-ARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDS-GVPCYFMHG 78 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhh-hccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHc-CCeEEEEeC
Confidence 6899999999543 2344444332 2356789999999985 2 2345677777777542 236999999
Q ss_pred Ccchhh
Q 024080 114 NHESRQ 119 (272)
Q Consensus 114 NHE~~~ 119 (272)
|||...
T Consensus 79 NHD~~~ 84 (241)
T PRK05340 79 NRDFLL 84 (241)
T ss_pred CCchhh
Confidence 999753
No 44
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.68 E-value=3.9e-07 Score=72.20 Aligned_cols=107 Identities=20% Similarity=0.121 Sum_probs=73.8
Q ss_pred eeeeCCCCCHHHHHHHHHHcCCCCCCeEEEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccCcchhhhhhhhCChHH
Q 024080 50 TVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDE 129 (272)
Q Consensus 50 ~viGDIHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~g~~~e 129 (272)
.||||.||..+.+.++... ..+.+.++++||+. .++++.+.+++ +..++.++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~--~~~~d~ii~~GD~~------~~~~~~~~~~~---~~~~~~V~GN~D------------- 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVR--LEGVDLILSAGDLP------KEYLEYLVTML---NVPVYYVHGNHD------------- 56 (129)
T ss_pred CeeccccCccccchHHHhh--CCCCCEEEECCCCC------hHHHHHHHHHc---CCCEEEEeCCCc-------------
Confidence 4899999998877776664 45678899999983 34556655541 224899999999
Q ss_pred HHHHhCChhHHHHHHHHhhccCceEEEcCcEEEecCCCCCCCCcHHHHhhccccccCCCCCccccccccCCCCCCCCccC
Q 024080 130 CLRKYGNANVWKYFTDLFDYLPLTALIESQIFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGIS 209 (272)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~l~vHaGi~p~~~~~~~i~~i~r~~~~~~~~~~~~llW~dp~~~~~~~~~ 209 (272)
-+++++|+-+.+ .... .+
T Consensus 57 ----------------------------~~Ilv~H~pp~~-~~~~------------------~~--------------- 74 (129)
T cd07403 57 ----------------------------VDILLTHAPPAG-IGDG------------------ED--------------- 74 (129)
T ss_pred ----------------------------cCEEEECCCCCc-CcCc------------------cc---------------
Confidence 468999974321 1000 00
Q ss_pred CCCCccccCHHHHHHHHHHcCCcEEEEcCCCCccCee
Q 024080 210 PRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYN 246 (272)
Q Consensus 210 ~~g~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~ 246 (272)
...-|...+.+++++.+.+.++.||+-.+..+.
T Consensus 75 ----~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 75 ----FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred ----ccccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 011245677788888899999999988776665
No 45
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.63 E-value=4e-07 Score=74.84 Aligned_cols=67 Identities=21% Similarity=0.172 Sum_probs=47.9
Q ss_pred ceeeeCCCCCHHHHHHHH-HHcCCCCCCeEEEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccCcchh
Q 024080 49 VTVCGDIHGQFYDLIELF-RIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESR 118 (272)
Q Consensus 49 i~viGDIHG~~~~l~~~l-~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 118 (272)
+.++||+|++.......+ +.....+.+.++++||+++++..+..+. ++... ..+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~~~~~-~~~~~--~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAPRFAP-LLLAL--KGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcchHHHHH-HHHhh--cCCccEEEeCCCcceE
Confidence 578999999988776655 3334456678889999999887665543 22222 2244699999999986
No 46
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.61 E-value=9.4e-07 Score=70.73 Aligned_cols=117 Identities=22% Similarity=0.195 Sum_probs=75.9
Q ss_pred ceeeeCCCCCHHH----------HHHHHHHcCCCCCCeEEEecCccCCCCCc--HHHHHHHHHhhHhcCCcEEEEccCcc
Q 024080 49 VTVCGDIHGQFYD----------LIELFRIGGNAPDTNYLFMGDYVDRGYYS--VETVTLLVALKVRYRDRITILRGNHE 116 (272)
Q Consensus 49 i~viGDIHG~~~~----------l~~~l~~~~~~~~~~~vflGD~vDrG~~s--~evl~~l~~l~~~~p~~v~~lrGNHE 116 (272)
++.|+|+|=.... |.++++.+...+.+.++++||+++.|... .+..+++..++... ..++.++||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHD 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCe
Confidence 4688999942221 12245555556678899999999988742 12344455553221 26999999999
Q ss_pred hhhhhhhhCChHHHHHHhCChhHHHHHHHHhhccCceEEEcCcEEEecCCCCCCCCcHHHHhhccccccCCCCCcccccc
Q 024080 117 SRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQIFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLL 196 (272)
Q Consensus 117 ~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~l~vHaGi~p~~~~~~~i~~i~r~~~~~~~~~~~~ll 196 (272)
. ++++|..+.+....
T Consensus 80 ~------------------------------------------iv~~Hhp~~~~~~~----------------------- 94 (144)
T cd07400 80 V------------------------------------------IVVLHHPLVPPPGS----------------------- 94 (144)
T ss_pred E------------------------------------------EEEecCCCCCCCcc-----------------------
Confidence 8 78899776432111
Q ss_pred ccCCCCCCCCccCCCCCccccCHHHHHHHHHHcCCcEEEEcCCCCccCee
Q 024080 197 WSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYN 246 (272)
Q Consensus 197 W~dp~~~~~~~~~~~g~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~ 246 (272)
+.... . +.+.+.+++++.++++++.||+-.+..+.
T Consensus 95 ---------~~~~~-----~-~~~~~~~~l~~~~~~~~l~GH~H~~~~~~ 129 (144)
T cd07400 95 ---------GRERL-----L-DAGDALKLLAEAGVDLVLHGHKHVPYVGN 129 (144)
T ss_pred ---------ccccC-----C-CHHHHHHHHHHcCCCEEEECCCCCcCeee
Confidence 00000 0 46678888899999999999988765554
No 47
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.54 E-value=5.4e-07 Score=78.41 Aligned_cols=68 Identities=12% Similarity=0.161 Sum_probs=43.6
Q ss_pred ceeeeCCCCCHH------HHHHHHHHcCCCCCCeEEEecCccCC--CC---Cc--HHHHHHHHHhhHhcCCcEEEEccCc
Q 024080 49 VTVCGDIHGQFY------DLIELFRIGGNAPDTNYLFMGDYVDR--GY---YS--VETVTLLVALKVRYRDRITILRGNH 115 (272)
Q Consensus 49 i~viGDIHG~~~------~l~~~l~~~~~~~~~~~vflGD~vDr--G~---~s--~evl~~l~~l~~~~p~~v~~lrGNH 115 (272)
+++|||+|.... .+.+.+.... .+.+.++++||++|. |. .+ .++.+.+..++.. +..++++.|||
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~-~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~-~~~v~~v~GNH 78 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEA-RKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQ-GVPCYFMHGNR 78 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhh-ccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHC-CCeEEEEcCCC
Confidence 478999996432 2333333322 256789999999995 21 11 3455666666432 34799999999
Q ss_pred chh
Q 024080 116 ESR 118 (272)
Q Consensus 116 E~~ 118 (272)
|..
T Consensus 79 D~~ 81 (231)
T TIGR01854 79 DFL 81 (231)
T ss_pred chh
Confidence 975
No 48
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.51 E-value=2.2e-07 Score=82.84 Aligned_cols=71 Identities=18% Similarity=0.138 Sum_probs=54.0
Q ss_pred CCCceeeeCCCCC----HHHHHHHHHHcCCCCCCeEEEecCccCCC--CCcHHHHHHHHHhhHhcCCcEEEEccCcchh
Q 024080 46 KCPVTVCGDIHGQ----FYDLIELFRIGGNAPDTNYLFMGDYVDRG--YYSVETVTLLVALKVRYRDRITILRGNHESR 118 (272)
Q Consensus 46 ~~~i~viGDIHG~----~~~l~~~l~~~~~~~~~~~vflGD~vDrG--~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 118 (272)
+.++++++|+|.. ...+.++++.+...+.+-++++||++|++ .+..++.+.+..++... .++.+.||||..
T Consensus 49 ~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~~~--pv~~V~GNHD~~ 125 (271)
T PRK11340 49 PFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAECA--PTFACFGNHDRP 125 (271)
T ss_pred CcEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCccccHHHHHHHHHHHhhcC--CEEEecCCCCcc
Confidence 3689999999976 55677888877666778889999999953 23345666677776544 499999999974
No 49
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.50 E-value=1.9e-07 Score=80.18 Aligned_cols=71 Identities=21% Similarity=0.189 Sum_probs=54.4
Q ss_pred CCceeeeCCCCCHH----HHHHHHHHcCCCCCCeEEEecCccCCCCCcH-HHHHHHHHhhHhcCCcEEEEccCcchhh
Q 024080 47 CPVTVCGDIHGQFY----DLIELFRIGGNAPDTNYLFMGDYVDRGYYSV-ETVTLLVALKVRYRDRITILRGNHESRQ 119 (272)
Q Consensus 47 ~~i~viGDIHG~~~----~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~-evl~~l~~l~~~~p~~v~~lrGNHE~~~ 119 (272)
+++++++|+|+... .+.++++.+.....+.++++||++|.+.... ++.+++..+.. +..++++.||||...
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~l~~l~~--~~~v~~v~GNHD~~~ 77 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKLKA--PLGVYAVLGNHDYYS 77 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhhHHHHHHHhccCC--CCCEEEECCCccccc
Confidence 58999999998754 6777777776566778889999999987765 55666655533 335999999999864
No 50
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.50 E-value=2.6e-06 Score=75.73 Aligned_cols=72 Identities=18% Similarity=0.221 Sum_probs=50.8
Q ss_pred CceeeeCCC--C-----------CHHHHHHHHHHcCCCCCCeEEEecCccCCCCC-cHHHHHHHHHhhHhcCCcEEEEcc
Q 024080 48 PVTVCGDIH--G-----------QFYDLIELFRIGGNAPDTNYLFMGDYVDRGYY-SVETVTLLVALKVRYRDRITILRG 113 (272)
Q Consensus 48 ~i~viGDIH--G-----------~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~-s~evl~~l~~l~~~~p~~v~~lrG 113 (272)
|+++|||+| . ....+.++++.+.....+-+|++||+++.|.. +.+-++.+.+.....+-.++.+.|
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~G 81 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVLG 81 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEecC
Confidence 688999999 2 24567788888865567788999999998863 333444444333333346999999
Q ss_pred Ccchhh
Q 024080 114 NHESRQ 119 (272)
Q Consensus 114 NHE~~~ 119 (272)
|||...
T Consensus 82 NHD~~~ 87 (267)
T cd07396 82 NHDLYN 87 (267)
T ss_pred cccccc
Confidence 999864
No 51
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=98.42 E-value=4.5e-07 Score=71.81 Aligned_cols=139 Identities=45% Similarity=0.669 Sum_probs=105.2
Q ss_pred hhhhCChHHHHHHhCChhHHHH---HHHHhhccCceEEEcC-cEEEecCCCCCCC-CcHHHHhhccccc--cCCCCCccc
Q 024080 121 TQVYGFYDECLRKYGNANVWKY---FTDLFDYLPLTALIES-QIFCLHGGLSPSL-DTLDNIRALDRIQ--EVPHEGPMC 193 (272)
Q Consensus 121 ~~~~g~~~e~~~~~~~~~~~~~---~~~~~~~lPl~~~~~~-~~l~vHaGi~p~~-~~~~~i~~i~r~~--~~~~~~~~~ 193 (272)
...+++..++...++....|.. ..++++.+|+.+...+ .++|.|++++|.. ....+++...|.. .....+...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~ 83 (155)
T COG0639 4 TALYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPHAGHTH 83 (155)
T ss_pred hhhhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCCccccc
Confidence 3445566665556554334555 8999999999888777 8999999999875 6677777777765 666667777
Q ss_pred cccccCCCC--CCCCccCCCCCccccCHHHHHHHHHHcCCcEEEEcCCCCccCeeEeCCCeEEEEeccc
Q 024080 194 DLLWSDPDD--RCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQVWNLKDHASFC 260 (272)
Q Consensus 194 ~llW~dp~~--~~~~~~~~~g~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~li~i~s~~ 260 (272)
..+|++|.. ...|...++|.+..+ .+.+..|......+.+.++|.....++...+....++.+++.
T Consensus 84 ~~~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~~~~~lt~~~~~ 151 (155)
T COG0639 84 DLLWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHVLYDIDTGAVFGGGLLTAFSAP 151 (155)
T ss_pred cccCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeEEEecCceEEeCCCeeeEEecc
Confidence 779998874 677988899988776 677888887777777999999999999887775556666553
No 52
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=98.30 E-value=1.4e-06 Score=76.01 Aligned_cols=68 Identities=19% Similarity=0.148 Sum_probs=50.2
Q ss_pred CceeeeCCCCCH------HHHHHHHHHcCCCCCCeEEEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccCcchh
Q 024080 48 PVTVCGDIHGQF------YDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESR 118 (272)
Q Consensus 48 ~i~viGDIHG~~------~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 118 (272)
++.+++|+|+++ ..+.++++.+...+.+-+|++||++++.+.+.+.++.+.++ .+..++++.||||..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 578999999763 23566777776566788999999999876666665555543 234699999999975
No 53
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=98.30 E-value=1.3e-05 Score=67.95 Aligned_cols=70 Identities=13% Similarity=0.083 Sum_probs=44.9
Q ss_pred CCceeeeCCCCCHH------------HHHHHHHHcCCCCCCeEEEecCccCCCCCc---HHHHHHHHHhhHhcCCcEEEE
Q 024080 47 CPVTVCGDIHGQFY------------DLIELFRIGGNAPDTNYLFMGDYVDRGYYS---VETVTLLVALKVRYRDRITIL 111 (272)
Q Consensus 47 ~~i~viGDIHG~~~------------~l~~~l~~~~~~~~~~~vflGD~vDrG~~s---~evl~~l~~l~~~~p~~v~~l 111 (272)
.++++++|+|-... .+..+.+.+.....+.+|++||+++.+... .+.+..+++......-.++++
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~ 82 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAAT 82 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEE
Confidence 47899999996332 122222233344567899999999976653 455555444333333458999
Q ss_pred ccCcc
Q 024080 112 RGNHE 116 (272)
Q Consensus 112 rGNHE 116 (272)
.||||
T Consensus 83 ~GNHD 87 (199)
T cd07383 83 FGNHD 87 (199)
T ss_pred CccCC
Confidence 99999
No 54
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.26 E-value=8.5e-06 Score=67.75 Aligned_cols=66 Identities=17% Similarity=0.190 Sum_probs=47.3
Q ss_pred CCceeeeCCCCCHHHHHHHHHHcCCCCCCeEEEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccCcchhhh
Q 024080 47 CPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQI 120 (272)
Q Consensus 47 ~~i~viGDIHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~ 120 (272)
|++.|+||.||...+.....+.....+.+.+|.+||++...+.. .+.. ....+++.++||.|....
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~~-----~l~~---~~~~~i~~V~GN~D~~~~ 67 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTLD-----ALEG---GLAAKLIAVRGNCDGEVD 67 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccchH-----Hhhc---ccccceEEEEccCCCccc
Confidence 68999999999997655566655566778888999999764321 1111 013479999999998743
No 55
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.23 E-value=8.6e-06 Score=70.06 Aligned_cols=147 Identities=16% Similarity=0.126 Sum_probs=80.2
Q ss_pred CceeeeCCCCCH----HHH----HHHHHHcCCCCCCeEEEecCccCCCCCcH---HHHHHHHHhhHhcCCcEEEEccCcc
Q 024080 48 PVTVCGDIHGQF----YDL----IELFRIGGNAPDTNYLFMGDYVDRGYYSV---ETVTLLVALKVRYRDRITILRGNHE 116 (272)
Q Consensus 48 ~i~viGDIHG~~----~~l----~~~l~~~~~~~~~~~vflGD~vDrG~~s~---evl~~l~~l~~~~p~~v~~lrGNHE 116 (272)
+++++||+|--. ..+ ..+++.+.....+-+|++||+++.+.... ...+.+..+.. .+-.+++++||||
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~-~~~p~~~~~GNHD 80 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDK-AGIPYSVLAGNHD 80 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHH-cCCcEEEECCCCc
Confidence 578999999522 223 33444444445677889999999988433 22333334321 1234889999999
Q ss_pred hhhhhhhhCChHHHHHHhCChhHHHHHHHHhhccCceEEEcCcEEEecCCCCCCCCcHHHHhhccccccCCCCCcccccc
Q 024080 117 SRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQIFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLL 196 (272)
Q Consensus 117 ~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~l~vHaGi~p~~~~~~~i~~i~r~~~~~~~~~~~~ll 196 (272)
..... ... ......+.+.+.++..|- ..-++++|-=+.+..... ....
T Consensus 81 ~~~~l-d~~---------~~~~ql~WL~~~L~~~~~----~~~iv~~H~p~~~~~~~~------------------~~~~ 128 (214)
T cd07399 81 LVLAL-EFG---------PRDEVLQWANEVLKKHPD----RPAILTTHAYLNCDDSRP------------------DSID 128 (214)
T ss_pred chhhC-CCC---------CCHHHHHHHHHHHHHCCC----CCEEEEecccccCCCCcC------------------cccc
Confidence 43211 111 012233344455554331 134788887553221100 0000
Q ss_pred ccCCCCCCCCccCCCCCccccCHHHHHHHHHHc-CCcEEEEcCCCC
Q 024080 197 WSDPDDRCGWGISPRGAGYTFGQDIASQFNHTN-GLSLISRAHQLV 241 (272)
Q Consensus 197 W~dp~~~~~~~~~~~g~~~~fg~~~~~~fl~~~-~~~~iirgH~~~ 241 (272)
| | .....+...+.++++++ ++++++.||.-.
T Consensus 129 ~--------~------~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~ 160 (214)
T cd07399 129 Y--------D------SDVNDGQQIWDKLVKKNDNVFMVLSGHVHG 160 (214)
T ss_pred c--------c------cccccHHHHHHHHHhCCCCEEEEEccccCC
Confidence 0 1 01123456777888887 899999999654
No 56
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=98.22 E-value=8.2e-05 Score=65.65 Aligned_cols=71 Identities=13% Similarity=-0.030 Sum_probs=44.5
Q ss_pred CceeeeCCCCCH----------------HHHHHHHHHcCCC--CCCeEEEecCccCCCCCcH---HHHHHHHHhhHhc--
Q 024080 48 PVTVCGDIHGQF----------------YDLIELFRIGGNA--PDTNYLFMGDYVDRGYYSV---ETVTLLVALKVRY-- 104 (272)
Q Consensus 48 ~i~viGDIHG~~----------------~~l~~~l~~~~~~--~~~~~vflGD~vDrG~~s~---evl~~l~~l~~~~-- 104 (272)
+++++||+|-.. ..++++++.+... ..+-++++||+++.|.... +....+.+.....
T Consensus 6 ~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (262)
T cd07395 6 YFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSLLDP 85 (262)
T ss_pred EEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhhccC
Confidence 577888888663 1355666666432 5677889999999887542 1122222221111
Q ss_pred CCcEEEEccCcchh
Q 024080 105 RDRITILRGNHESR 118 (272)
Q Consensus 105 p~~v~~lrGNHE~~ 118 (272)
+-.++.++||||..
T Consensus 86 ~vp~~~i~GNHD~~ 99 (262)
T cd07395 86 DIPLVCVCGNHDVG 99 (262)
T ss_pred CCcEEEeCCCCCCC
Confidence 23599999999974
No 57
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.17 E-value=4.4e-06 Score=73.77 Aligned_cols=72 Identities=21% Similarity=0.200 Sum_probs=49.9
Q ss_pred CCceeeeCCCC-C-----------HHHHHHHHHHcCCCCCCeEEEecCccCCCCCcHHHH----HHHHHhhHhcCCcEEE
Q 024080 47 CPVTVCGDIHG-Q-----------FYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETV----TLLVALKVRYRDRITI 110 (272)
Q Consensus 47 ~~i~viGDIHG-~-----------~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl----~~l~~l~~~~p~~v~~ 110 (272)
|+++.++|+|- . +..|..+++.+.....+.+++.||++|+...+.+.. +++.+|+...|-.+++
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~ 80 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVV 80 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEE
Confidence 57899999993 2 234555666555556788999999999876554433 4444554433246999
Q ss_pred EccCcchh
Q 024080 111 LRGNHESR 118 (272)
Q Consensus 111 lrGNHE~~ 118 (272)
+.||||..
T Consensus 81 i~GNHD~~ 88 (253)
T TIGR00619 81 ISGNHDSA 88 (253)
T ss_pred EccCCCCh
Confidence 99999985
No 58
>PHA02546 47 endonuclease subunit; Provisional
Probab=98.05 E-value=9.8e-06 Score=74.61 Aligned_cols=72 Identities=21% Similarity=0.272 Sum_probs=49.2
Q ss_pred CCceeeeCCC-C-----------CHHHHHHHHHHcCCCCCCeEEEecCccCCC-CCcHHHHHHHHH----hhHhcCCcEE
Q 024080 47 CPVTVCGDIH-G-----------QFYDLIELFRIGGNAPDTNYLFMGDYVDRG-YYSVETVTLLVA----LKVRYRDRIT 109 (272)
Q Consensus 47 ~~i~viGDIH-G-----------~~~~l~~~l~~~~~~~~~~~vflGD~vDrG-~~s~evl~~l~~----l~~~~p~~v~ 109 (272)
||++.+||+| | ....|..+++.+...+.+.++++||++|+. +.+.+++.++.. .....+-.++
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~ 80 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLH 80 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 6889999999 4 123455565555556678899999999985 455555555433 2122334699
Q ss_pred EEccCcchh
Q 024080 110 ILRGNHESR 118 (272)
Q Consensus 110 ~lrGNHE~~ 118 (272)
+|.||||..
T Consensus 81 ~I~GNHD~~ 89 (340)
T PHA02546 81 VLVGNHDMY 89 (340)
T ss_pred EEccCCCcc
Confidence 999999974
No 59
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=98.04 E-value=1.3e-05 Score=66.23 Aligned_cols=67 Identities=27% Similarity=0.385 Sum_probs=46.6
Q ss_pred ceeeeCCCCCHHHH---------------HHHHHHcC--CCCCCeEEEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEE
Q 024080 49 VTVCGDIHGQFYDL---------------IELFRIGG--NAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITIL 111 (272)
Q Consensus 49 i~viGDIHG~~~~l---------------~~~l~~~~--~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l 111 (272)
+++|+|+|=..... .++++.+. ..+.+.+|++||++++|..+.. ++++.++ +..++++
T Consensus 1 ~~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~-~~~l~~~----~~~~~~v 75 (168)
T cd07390 1 IYFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTE-LELLSRL----NGRKHLI 75 (168)
T ss_pred CeEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHH-HHHHHhC----CCCeEEE
Confidence 47899999765532 23444443 2356889999999999987644 5555544 4469999
Q ss_pred ccCcchhhh
Q 024080 112 RGNHESRQI 120 (272)
Q Consensus 112 rGNHE~~~~ 120 (272)
+||||....
T Consensus 76 ~GNHD~~~~ 84 (168)
T cd07390 76 KGNHDSSLE 84 (168)
T ss_pred eCCCCchhh
Confidence 999997653
No 60
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=98.04 E-value=1.6e-05 Score=69.03 Aligned_cols=67 Identities=25% Similarity=0.264 Sum_probs=47.0
Q ss_pred CceeeeCCCCC------------HHHHHHHHHHcCCC--CCCeEEEecCccCCCCCc-H-HHHHHHHHhhHhcCCcEEEE
Q 024080 48 PVTVCGDIHGQ------------FYDLIELFRIGGNA--PDTNYLFMGDYVDRGYYS-V-ETVTLLVALKVRYRDRITIL 111 (272)
Q Consensus 48 ~i~viGDIHG~------------~~~l~~~l~~~~~~--~~~~~vflGD~vDrG~~s-~-evl~~l~~l~~~~p~~v~~l 111 (272)
|++++||+|=. ...++++++.+... +.+-+|++||+++.|... . .+++.+.++ +-.++.+
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~~----~~p~~~v 76 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSPESYERLRELLAAL----PIPVYLL 76 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCHHHHHHHHHHHhhc----CCCEEEe
Confidence 57899999955 34577788776544 667888999999987532 1 233333333 4468999
Q ss_pred ccCcchh
Q 024080 112 RGNHESR 118 (272)
Q Consensus 112 rGNHE~~ 118 (272)
+||||..
T Consensus 77 ~GNHD~~ 83 (240)
T cd07402 77 PGNHDDR 83 (240)
T ss_pred CCCCCCH
Confidence 9999974
No 61
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.02 E-value=1.7e-05 Score=68.40 Aligned_cols=172 Identities=17% Similarity=0.186 Sum_probs=89.6
Q ss_pred eeeeCCCCC------HHHHHHHHHHcCCCCCCeEEEecCccCC--CCC-c----HHHHHHHHHhhHhcCCcEEEEccCcc
Q 024080 50 TVCGDIHGQ------FYDLIELFRIGGNAPDTNYLFMGDYVDR--GYY-S----VETVTLLVALKVRYRDRITILRGNHE 116 (272)
Q Consensus 50 ~viGDIHG~------~~~l~~~l~~~~~~~~~~~vflGD~vDr--G~~-s----~evl~~l~~l~~~~p~~v~~lrGNHE 116 (272)
++|||+|=. .+.|.+.|+... +..+.++++||++|- |.+ . .+|...|..+.. ...+++++.||||
T Consensus 1 lFISDlHL~~~~p~~t~~fl~Fl~~~a-~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a~-~G~~v~~i~GN~D 78 (237)
T COG2908 1 LFISDLHLGPKRPALTAFFLDFLREEA-AQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLAR-KGTRVYYIHGNHD 78 (237)
T ss_pred CeeeccccCCCCcHHHHHHHHHHHhcc-ccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHHh-cCCeEEEecCchH
Confidence 478999955 223445555432 355889999999973 443 2 334555554433 3458999999999
Q ss_pred hhhhhhhhCChHHHHHHhCChhHHHHHHHHhhccCceE---EEcCcEEEecCCCCCCCCc------------HHHHhhcc
Q 024080 117 SRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTA---LIESQIFCLHGGLSPSLDT------------LDNIRALD 181 (272)
Q Consensus 117 ~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~lPl~~---~~~~~~l~vHaGi~p~~~~------------~~~i~~i~ 181 (272)
..+ ...++ ...|. +.-+|-.. ..+.+++++||..--.... +.+..-++
T Consensus 79 fll-~~~f~------~~~g~----------~~l~~~~~~~~l~g~~~Ll~HGD~f~t~~~~y~~~r~~~~~~~~~~lfln 141 (237)
T COG2908 79 FLL-GKRFA------QEAGG----------MTLLPDPIVLDLYGKRILLAHGDTFCTDDRAYQWFRYKVHWAWLQLLFLN 141 (237)
T ss_pred HHH-HHHHH------hhcCc----------eEEcCcceeeeecCcEEEEEeCCcccchHHHHHHHHHHcccHHHHHHHHH
Confidence 543 32211 11111 11223221 2257999999986311100 11111111
Q ss_pred ccccCCCCCccccccccCCCCCCCCccCCCCCc---cccCHHHHHHHHHHcCCcEEEEcCCCCccCee
Q 024080 182 RIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAG---YTFGQDIASQFNHTNGLSLISRAHQLVMEGYN 246 (272)
Q Consensus 182 r~~~~~~~~~~~~llW~dp~~~~~~~~~~~g~~---~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~ 246 (272)
.+... ...+..-+|+. ..|........ .....+.+.+-+++.|++.+|.||+-.+..-.
T Consensus 142 l~l~~--R~ri~~k~r~~----s~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~ 203 (237)
T COG2908 142 LPLRV--RRRIAYKIRSL----SSWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIHN 203 (237)
T ss_pred hHHHH--HHHHHHHHHHh----hHHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhcc
Confidence 11100 00112335553 12322211111 12457777888999999999999988765443
No 62
>PRK04036 DNA polymerase II small subunit; Validated
Probab=98.02 E-value=1.5e-05 Score=77.07 Aligned_cols=72 Identities=22% Similarity=0.308 Sum_probs=45.8
Q ss_pred CCCceeeeCCC-CCH----HHHHHHHHHcC---------CCCCCeEEEecCccCC-CCCc---------------HHHHH
Q 024080 46 KCPVTVCGDIH-GQF----YDLIELFRIGG---------NAPDTNYLFMGDYVDR-GYYS---------------VETVT 95 (272)
Q Consensus 46 ~~~i~viGDIH-G~~----~~l~~~l~~~~---------~~~~~~~vflGD~vDr-G~~s---------------~evl~ 95 (272)
+.++++|+|+| |.. ..+..+++.+. ....+.+|++||++|. |+.+ .++.+
T Consensus 243 ~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~ 322 (504)
T PRK04036 243 KVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAE 322 (504)
T ss_pred ccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHH
Confidence 45799999999 542 23444544443 2234689999999994 3221 13445
Q ss_pred HHHHhhHhcCCcEEEEccCcchhh
Q 024080 96 LLVALKVRYRDRITILRGNHESRQ 119 (272)
Q Consensus 96 ~l~~l~~~~p~~v~~lrGNHE~~~ 119 (272)
++.++.. .-.+++++||||...
T Consensus 323 ~L~~L~~--~i~V~~ipGNHD~~~ 344 (504)
T PRK04036 323 YLKQIPE--DIKIIISPGNHDAVR 344 (504)
T ss_pred HHHhhhc--CCeEEEecCCCcchh
Confidence 5555532 225999999999764
No 63
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=98.00 E-value=7.1e-05 Score=72.49 Aligned_cols=44 Identities=23% Similarity=0.310 Sum_probs=37.8
Q ss_pred CCCCeEEEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccCcchhhh
Q 024080 72 APDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQI 120 (272)
Q Consensus 72 ~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~ 120 (272)
...|++-.+||+.||||.+-.+++.|+.. + +|=+-.||||...+
T Consensus 183 L~VDhLHIvGDIyDRGp~pd~ImD~Lm~~----h-svDIQWGNHDIlWM 226 (640)
T PF06874_consen 183 LAVDHLHIVGDIYDRGPRPDKIMDRLMNY----H-SVDIQWGNHDILWM 226 (640)
T ss_pred HhhhheeecccccCCCCChhHHHHHHhcC----C-CccccccchHHHHH
Confidence 34577889999999999999999999966 3 68899999998754
No 64
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=98.00 E-value=5.4e-05 Score=61.92 Aligned_cols=50 Identities=20% Similarity=0.200 Sum_probs=31.6
Q ss_pred CCCCCCeEEEecCccCCCCCc-HHHH-HHHHHhhHh---c-CCcEEEEccCcchhh
Q 024080 70 GNAPDTNYLFMGDYVDRGYYS-VETV-TLLVALKVR---Y-RDRITILRGNHESRQ 119 (272)
Q Consensus 70 ~~~~~~~~vflGD~vDrG~~s-~evl-~~l~~l~~~---~-p~~v~~lrGNHE~~~ 119 (272)
.....+.+|++||+++.+..+ .+.. ..+.+++.. . +-.++++.||||...
T Consensus 35 ~~~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~~ 90 (156)
T cd08165 35 WLLQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIGF 90 (156)
T ss_pred HhcCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcCC
Confidence 345678899999999987643 2222 223333222 1 236999999999853
No 65
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.99 E-value=1.6e-05 Score=67.83 Aligned_cols=73 Identities=25% Similarity=0.261 Sum_probs=49.9
Q ss_pred CceeeeCCC-CCH--------------HHHHHHHHHcCCCCCCeEEEecCccCCCCCcHHHHHHHHHhhHhc---CCcEE
Q 024080 48 PVTVCGDIH-GQF--------------YDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRY---RDRIT 109 (272)
Q Consensus 48 ~i~viGDIH-G~~--------------~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~---p~~v~ 109 (272)
|++.++|+| |.. ..|.++++.+...+.+.+|++||+++....+.+.+..+.+..... .-.++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 578999999 321 236667776666667789999999998766555444433332222 34699
Q ss_pred EEccCcchhhh
Q 024080 110 ILRGNHESRQI 120 (272)
Q Consensus 110 ~lrGNHE~~~~ 120 (272)
++.||||....
T Consensus 81 ~~~GNHD~~~~ 91 (223)
T cd00840 81 IIAGNHDSPSR 91 (223)
T ss_pred EecCCCCCccc
Confidence 99999998754
No 66
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=97.96 E-value=1.9e-05 Score=70.47 Aligned_cols=71 Identities=14% Similarity=0.087 Sum_probs=49.0
Q ss_pred CCCceeeeCCCC------------CHHHHHHHHHHcCC--CCCCeEEEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEE
Q 024080 46 KCPVTVCGDIHG------------QFYDLIELFRIGGN--APDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITIL 111 (272)
Q Consensus 46 ~~~i~viGDIHG------------~~~~l~~~l~~~~~--~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l 111 (272)
+++++.|+|+|= ....|.++++.+.. ++.+-+|+.||+++.|. .+-+..+.+...+.+..++.+
T Consensus 14 ~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~--~~~~~~~~~~l~~l~~Pv~~v 91 (275)
T PRK11148 14 RVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS--SEAYQHFAEGIAPLRKPCVWL 91 (275)
T ss_pred CEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC--HHHHHHHHHHHhhcCCcEEEe
Confidence 468999999991 24567788887643 34577889999999874 333333333323334569999
Q ss_pred ccCcchh
Q 024080 112 RGNHESR 118 (272)
Q Consensus 112 rGNHE~~ 118 (272)
.||||..
T Consensus 92 ~GNHD~~ 98 (275)
T PRK11148 92 PGNHDFQ 98 (275)
T ss_pred CCCCCCh
Confidence 9999974
No 67
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=97.94 E-value=0.00028 Score=60.44 Aligned_cols=75 Identities=21% Similarity=0.237 Sum_probs=57.7
Q ss_pred CCCceeeeCCCCCHHHHHHHHHHcCCCCCCeEEEecCcc--CCCCCcHHHHH-HHHHhhHhcCCcEEEEccCcchhhhh
Q 024080 46 KCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYV--DRGYYSVETVT-LLVALKVRYRDRITILRGNHESRQIT 121 (272)
Q Consensus 46 ~~~i~viGDIHG~~~~l~~~l~~~~~~~~~~~vflGD~v--DrG~~s~evl~-~l~~l~~~~p~~v~~lrGNHE~~~~~ 121 (272)
++++.++.|+||.++.+.+++..+.....+-+++.||+. +.|+.-...-+ .+..++.. ...++.++||.|...+.
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~~~~~~~e~l~~~-~~~v~avpGNcD~~~v~ 80 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVAEELNKLEALKEL-GIPVLAVPGNCDPPEVI 80 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchHHHHhhhHHHHHHhc-CCeEEEEcCCCChHHHH
Confidence 578999999999999999999998878888899999999 88775433322 13333322 34799999999987653
No 68
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.91 E-value=0.00023 Score=62.94 Aligned_cols=70 Identities=19% Similarity=0.104 Sum_probs=43.2
Q ss_pred ceeeeCCCCCHH------HH-HHHHHHcCCCCCCeEEEecCccCCCCCc-------H----HHHHHHHHhhHhcCCcEEE
Q 024080 49 VTVCGDIHGQFY------DL-IELFRIGGNAPDTNYLFMGDYVDRGYYS-------V----ETVTLLVALKVRYRDRITI 110 (272)
Q Consensus 49 i~viGDIHG~~~------~l-~~~l~~~~~~~~~~~vflGD~vDrG~~s-------~----evl~~l~~l~~~~p~~v~~ 110 (272)
++.++|+|-... .. ..+++.+...+.+-+|++||++|++... . +.++.+..+....+..++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 467999996322 12 3345556556677889999999986531 1 1222222222222456899
Q ss_pred EccCcchh
Q 024080 111 LRGNHESR 118 (272)
Q Consensus 111 lrGNHE~~ 118 (272)
++||||..
T Consensus 82 v~GNHD~~ 89 (256)
T cd07401 82 IRGNHDLF 89 (256)
T ss_pred eCCCCCcC
Confidence 99999995
No 69
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=97.87 E-value=3.5e-05 Score=67.06 Aligned_cols=66 Identities=20% Similarity=0.177 Sum_probs=42.2
Q ss_pred ceeeeCCCCCH--------------HHHHHHHHHcC--CCCCCeEEEecCccCCCCCc--HHHHHHHHHhhHhcCCcEEE
Q 024080 49 VTVCGDIHGQF--------------YDLIELFRIGG--NAPDTNYLFMGDYVDRGYYS--VETVTLLVALKVRYRDRITI 110 (272)
Q Consensus 49 i~viGDIHG~~--------------~~l~~~l~~~~--~~~~~~~vflGD~vDrG~~s--~evl~~l~~l~~~~p~~v~~ 110 (272)
+++++|+|-.. +.+.++.+.+. .++.|-+|+.||++++++.. .+.+.++.++ |..+++
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~~~~~~~l~~l~~l----~~~v~~ 76 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKLEEAKLDLAWIDAL----PGTKVL 76 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCChHHHHHHHHHHHhC----CCCeEE
Confidence 57899999652 22333333332 23678888999999877532 2344444443 345899
Q ss_pred EccCcchh
Q 024080 111 LRGNHESR 118 (272)
Q Consensus 111 lrGNHE~~ 118 (272)
+.||||..
T Consensus 77 V~GNHD~~ 84 (232)
T cd07393 77 LKGNHDYW 84 (232)
T ss_pred EeCCcccc
Confidence 99999973
No 70
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.79 E-value=7.4e-05 Score=64.87 Aligned_cols=69 Identities=17% Similarity=0.138 Sum_probs=45.0
Q ss_pred CCceeeeCCC-CCHHHH----------------HHHHHHcCCCCCCeEEEecCccCCCCC---cHHHHHHHHHhhHhcCC
Q 024080 47 CPVTVCGDIH-GQFYDL----------------IELFRIGGNAPDTNYLFMGDYVDRGYY---SVETVTLLVALKVRYRD 106 (272)
Q Consensus 47 ~~i~viGDIH-G~~~~l----------------~~~l~~~~~~~~~~~vflGD~vDrG~~---s~evl~~l~~l~~~~p~ 106 (272)
.++.+|+|+| |--..+ .++.+.+...+.+.+|++||+.+.... ..++.+++.++ ..
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~----~~ 90 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVT----FR 90 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhc----CC
Confidence 5789999999 533322 223333344557889999999975544 22333444443 34
Q ss_pred cEEEEccCcchhh
Q 024080 107 RITILRGNHESRQ 119 (272)
Q Consensus 107 ~v~~lrGNHE~~~ 119 (272)
.+++++||||...
T Consensus 91 ~v~~V~GNHD~~~ 103 (225)
T TIGR00024 91 DLILIRGNHDALI 103 (225)
T ss_pred cEEEECCCCCCcc
Confidence 7999999999764
No 71
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=97.76 E-value=0.0001 Score=65.28 Aligned_cols=73 Identities=19% Similarity=0.208 Sum_probs=53.2
Q ss_pred CCceeeeCCCCC------HHHHHHHHHHcCCCCCCeEEEecCccCCCCCcHHHHHHHHHhhH--hcCCcEEEEccCcchh
Q 024080 47 CPVTVCGDIHGQ------FYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKV--RYRDRITILRGNHESR 118 (272)
Q Consensus 47 ~~i~viGDIHG~------~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~--~~p~~v~~lrGNHE~~ 118 (272)
++++.|+|+|-. ...+.++++.+...+.|-+|+.||+.+.|. .+-++.+..+.. ..+..++.++||||..
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~--~~~~~~~~~~l~~~~~~~~~~~vpGNHD~~ 78 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGE--PEEYRRLKELLARLELPAPVIVVPGNHDAR 78 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCC--HHHHHHHHHHHhhccCCCceEeeCCCCcCC
Confidence 478999999987 345667778887777789999999999953 333333333322 4466799999999998
Q ss_pred hhh
Q 024080 119 QIT 121 (272)
Q Consensus 119 ~~~ 121 (272)
...
T Consensus 79 ~~~ 81 (301)
T COG1409 79 VVN 81 (301)
T ss_pred chH
Confidence 755
No 72
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=97.70 E-value=0.00011 Score=69.20 Aligned_cols=74 Identities=16% Similarity=0.158 Sum_probs=57.2
Q ss_pred CCCceeeeCCCCC------------HHHHHHHHHHcCCCCCCeEEEecCccCCCCCcHHHHHHHHHhhHh----------
Q 024080 46 KCPVTVCGDIHGQ------------FYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVR---------- 103 (272)
Q Consensus 46 ~~~i~viGDIHG~------------~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~---------- 103 (272)
.+|+++++|+|-- +.+|.++++.+.....|-+|+.||+.|++.-|.+++..++++..+
T Consensus 3 ~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p~~~ 82 (405)
T TIGR00583 3 TIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKPCEL 82 (405)
T ss_pred ceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCccch
Confidence 4689999999943 457778888887677788999999999999898877665544332
Q ss_pred --------------------------cCCcEEEEccCcchhh
Q 024080 104 --------------------------YRDRITILRGNHESRQ 119 (272)
Q Consensus 104 --------------------------~p~~v~~lrGNHE~~~ 119 (272)
..-.|+++-||||...
T Consensus 83 ~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~ 124 (405)
T TIGR00583 83 EFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPS 124 (405)
T ss_pred hhccchhhhcccccccccccccccccCCCCEEEEcCCCCCcc
Confidence 1226999999999974
No 73
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.69 E-value=0.00012 Score=64.92 Aligned_cols=70 Identities=16% Similarity=0.201 Sum_probs=45.3
Q ss_pred ceeeeCCCCCHHHHHHHHHHc---CCCCCCeEEEecCccCCCCCc-HHHH----------HHHHHh--hHhcCCcEEEEc
Q 024080 49 VTVCGDIHGQFYDLIELFRIG---GNAPDTNYLFMGDYVDRGYYS-VETV----------TLLVAL--KVRYRDRITILR 112 (272)
Q Consensus 49 i~viGDIHG~~~~l~~~l~~~---~~~~~~~~vflGD~vDrG~~s-~evl----------~~l~~l--~~~~p~~v~~lr 112 (272)
|+|+||+||+++.+.+.++.. ...+.+-+|++||+-..+..+ .+.+ ++..-+ ....|--+++|.
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 689999999999987655543 235667888999997554433 2221 121111 122455579999
Q ss_pred cCcchh
Q 024080 113 GNHESR 118 (272)
Q Consensus 113 GNHE~~ 118 (272)
||||..
T Consensus 81 GNHE~~ 86 (262)
T cd00844 81 GNHEAS 86 (262)
T ss_pred CCCCCH
Confidence 999974
No 74
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.69 E-value=9.3e-05 Score=61.35 Aligned_cols=57 Identities=18% Similarity=0.184 Sum_probs=35.3
Q ss_pred HHHHHHHcCCCCCCeEEEecCccCCCCCcH-HHHHHH--HHhhHhcCCcEEEEccCcchhh
Q 024080 62 LIELFRIGGNAPDTNYLFMGDYVDRGYYSV-ETVTLL--VALKVRYRDRITILRGNHESRQ 119 (272)
Q Consensus 62 l~~~l~~~~~~~~~~~vflGD~vDrG~~s~-evl~~l--~~l~~~~p~~v~~lrGNHE~~~ 119 (272)
+.++.+.+...+.+.+|++||+++....+. +....+ ..+ ...+..+++++||||...
T Consensus 30 ~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~i~GNHD~~~ 89 (172)
T cd07391 30 LERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRL-LAKDVDVILIRGNHDGGL 89 (172)
T ss_pred HHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHh-ccCCCeEEEEcccCccch
Confidence 445555555566789999999998654332 222221 111 123447999999999864
No 75
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.62 E-value=0.00013 Score=68.88 Aligned_cols=72 Identities=22% Similarity=0.240 Sum_probs=48.1
Q ss_pred CCceeeeCCCCC--H------HH----HHHHHHHcCCCCCCeEEEecCccCCCCCcHHHH----HHHHHhhHhcCCcEEE
Q 024080 47 CPVTVCGDIHGQ--F------YD----LIELFRIGGNAPDTNYLFMGDYVDRGYYSVETV----TLLVALKVRYRDRITI 110 (272)
Q Consensus 47 ~~i~viGDIHG~--~------~~----l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl----~~l~~l~~~~p~~v~~ 110 (272)
|+++.++|+|-. + .+ +..+++.+.....+.+|+.||++|++..+.... .++..++.. +-.+++
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~-~~~v~~ 79 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQT-GCQLVV 79 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHhc-CCcEEE
Confidence 578999999942 1 11 334555555567788999999999986554332 334444432 336999
Q ss_pred EccCcchhh
Q 024080 111 LRGNHESRQ 119 (272)
Q Consensus 111 lrGNHE~~~ 119 (272)
+.||||...
T Consensus 80 I~GNHD~~~ 88 (407)
T PRK10966 80 LAGNHDSVA 88 (407)
T ss_pred EcCCCCChh
Confidence 999999753
No 76
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=97.61 E-value=0.0052 Score=54.44 Aligned_cols=43 Identities=2% Similarity=-0.110 Sum_probs=30.5
Q ss_pred cCHHHHHHHHHHcCCcEEEEcCCCCccCeeEeCC-------C--eEEEEecccc
Q 024080 217 FGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQV-------W--NLKDHASFCF 261 (272)
Q Consensus 217 fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~-------~--~li~i~s~~~ 261 (272)
-..+..+.+|++.+-.+|.-||+- ++.+..+. + +=+|+.|+.+
T Consensus 203 l~~~~s~~il~~~~P~~vfsGhdH--~~C~~~h~~~~~~~~~~~~E~tv~S~s~ 254 (257)
T cd08163 203 LEPSLSEVILKAVQPVIAFSGDDH--DYCEVVHEYQFNGKSGSTREITVKSISM 254 (257)
T ss_pred cCHHHHHHHHHhhCCcEEEecCCC--ccceeEcccccCCCCCCceEEEeccccc
Confidence 468889999999999999999973 44455444 2 2357766543
No 77
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=97.59 E-value=0.00017 Score=61.57 Aligned_cols=69 Identities=22% Similarity=0.229 Sum_probs=39.1
Q ss_pred eeeeCCCC---CHHH---HHHHHHHcCCCCCCeEEEecCccCC--CCC-----c-HHHHHHHHHhhHhcCCcEEEEccCc
Q 024080 50 TVCGDIHG---QFYD---LIELFRIGGNAPDTNYLFMGDYVDR--GYY-----S-VETVTLLVALKVRYRDRITILRGNH 115 (272)
Q Consensus 50 ~viGDIHG---~~~~---l~~~l~~~~~~~~~~~vflGD~vDr--G~~-----s-~evl~~l~~l~~~~p~~v~~lrGNH 115 (272)
++|||+|- .... +...++.....+.+.+|++||++|. ++. . .+.+..+.++. .....++.+.|||
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~~v~GNH 79 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLA-DRGTRVYYVPGNH 79 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHH-HCCCeEEEECCCc
Confidence 58999992 2222 2222222112467889999999984 111 1 12223333332 2345799999999
Q ss_pred chhh
Q 024080 116 ESRQ 119 (272)
Q Consensus 116 E~~~ 119 (272)
|...
T Consensus 80 D~~~ 83 (217)
T cd07398 80 DFLL 83 (217)
T ss_pred hHHH
Confidence 9865
No 78
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=97.51 E-value=0.00018 Score=64.52 Aligned_cols=71 Identities=21% Similarity=0.242 Sum_probs=51.6
Q ss_pred CCceeeeCCCCCHHH--HHHHHHHcCCCCCCeEEEecCccCC--CCCcHHHHHHHHHhhHhcCCcEEEEccCcchhh
Q 024080 47 CPVTVCGDIHGQFYD--LIELFRIGGNAPDTNYLFMGDYVDR--GYYSVETVTLLVALKVRYRDRITILRGNHESRQ 119 (272)
Q Consensus 47 ~~i~viGDIHG~~~~--l~~~l~~~~~~~~~~~vflGD~vDr--G~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~ 119 (272)
.+|+.++|+|-.... ..+.+..+....+|-+++.||++|+ -+....+...+..|+..+ .++++.||||...
T Consensus 45 ~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~~~~~~~~~~~L~~L~~~~--gv~av~GNHd~~~ 119 (284)
T COG1408 45 LKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDRPPGVAALALFLAKLKAPL--GVFAVLGNHDYGV 119 (284)
T ss_pred eEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCCCCCHHHHHHHHHhhhccC--CEEEEeccccccc
Confidence 469999999988666 2344444443344788899999995 445555777788887644 6999999998764
No 79
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=97.47 E-value=0.00019 Score=62.82 Aligned_cols=68 Identities=21% Similarity=0.249 Sum_probs=40.6
Q ss_pred eeeeCCC--CCH---HHHHHHHHHcCCC-----CCCeEEEecCccCCCCC------------c----HHHHHHHHHhhHh
Q 024080 50 TVCGDIH--GQF---YDLIELFRIGGNA-----PDTNYLFMGDYVDRGYY------------S----VETVTLLVALKVR 103 (272)
Q Consensus 50 ~viGDIH--G~~---~~l~~~l~~~~~~-----~~~~~vflGD~vDrG~~------------s----~evl~~l~~l~~~ 103 (272)
++|||+| +.. ..+..+++.+... ..+.+|++||++|+... . ..+.+++.++..
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~- 80 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPS- 80 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhccc-
Confidence 6899999 331 2334444444322 34789999999997310 0 123334444432
Q ss_pred cCCcEEEEccCcchhh
Q 024080 104 YRDRITILRGNHESRQ 119 (272)
Q Consensus 104 ~p~~v~~lrGNHE~~~ 119 (272)
.-.|+++.||||...
T Consensus 81 -~~~v~~ipGNHD~~~ 95 (243)
T cd07386 81 -HIKIIIIPGNHDAVR 95 (243)
T ss_pred -CCeEEEeCCCCCccc
Confidence 236999999999853
No 80
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=97.46 E-value=0.00039 Score=56.26 Aligned_cols=67 Identities=19% Similarity=0.208 Sum_probs=47.1
Q ss_pred ceeeeCCCC------------CHHHHHH-HHHHcC--CCCCCeEEEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEcc
Q 024080 49 VTVCGDIHG------------QFYDLIE-LFRIGG--NAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRG 113 (272)
Q Consensus 49 i~viGDIHG------------~~~~l~~-~l~~~~--~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrG 113 (272)
++++||.|= +.+.... +|.-.. ..++|.+++|||+.-.-.+..+..+.+.+| ++++++++|
T Consensus 6 myfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~~a~~IlerL----nGrkhlv~G 81 (186)
T COG4186 6 MYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRERAAGLILERL----NGRKHLVPG 81 (186)
T ss_pred EEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchhhHHHHHHHHc----CCcEEEeeC
Confidence 688899884 3344433 233222 346778889999987655566666767777 889999999
Q ss_pred Ccchhh
Q 024080 114 NHESRQ 119 (272)
Q Consensus 114 NHE~~~ 119 (272)
|||---
T Consensus 82 NhDk~~ 87 (186)
T COG4186 82 NHDKCH 87 (186)
T ss_pred CCCCCc
Confidence 999864
No 81
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=97.35 E-value=0.00023 Score=63.73 Aligned_cols=72 Identities=17% Similarity=0.132 Sum_probs=42.0
Q ss_pred CCceeeeCCCCCHHHHHHHHHHcC--CCCCCeEEEecCccCCC-CCc----HHHHHHHHHhhHhcCCcEEEEccCcchhh
Q 024080 47 CPVTVCGDIHGQFYDLIELFRIGG--NAPDTNYLFMGDYVDRG-YYS----VETVTLLVALKVRYRDRITILRGNHESRQ 119 (272)
Q Consensus 47 ~~i~viGDIHG~~~~l~~~l~~~~--~~~~~~~vflGD~vDrG-~~s----~evl~~l~~l~~~~p~~v~~lrGNHE~~~ 119 (272)
-+++++||.|.....-...++.+. ..+.+-+|++||+++.+ ..+ -.....+..+.... .++.++||||...
T Consensus 5 ~~f~v~gD~~~~~~~~~~~~~~l~~~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~--P~~~~~GNHD~~~ 82 (294)
T cd00839 5 FKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYV--PYMVTPGNHEADY 82 (294)
T ss_pred EEEEEEEECCCCCCCcHHHHHHHHhccCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcC--CcEEcCccccccc
Confidence 478999999963222223333322 24556788999999544 322 12233333333333 4899999999864
Q ss_pred h
Q 024080 120 I 120 (272)
Q Consensus 120 ~ 120 (272)
.
T Consensus 83 ~ 83 (294)
T cd00839 83 N 83 (294)
T ss_pred C
Confidence 3
No 82
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=97.21 E-value=0.00078 Score=57.06 Aligned_cols=49 Identities=18% Similarity=0.317 Sum_probs=36.3
Q ss_pred CCCCCCeEEEecCccCCCCCc--HHHHHHHHHhhHhcC----CcEEEEccCcchh
Q 024080 70 GNAPDTNYLFMGDYVDRGYYS--VETVTLLVALKVRYR----DRITILRGNHESR 118 (272)
Q Consensus 70 ~~~~~~~~vflGD~vDrG~~s--~evl~~l~~l~~~~p----~~v~~lrGNHE~~ 118 (272)
.....+-++|+||++|.|+.+ .+..+.+.+++..++ -.+++|.||||.-
T Consensus 39 ~~l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 39 NFVQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred hccCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 344678899999999999964 346777777665422 2688999999975
No 83
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=97.17 E-value=0.0011 Score=55.06 Aligned_cols=51 Identities=22% Similarity=0.188 Sum_probs=33.1
Q ss_pred cCCCCCCeEEEecCccCCCCCcH--H---HHHHHHHhhHhc-----CCcEEEEccCcchhh
Q 024080 69 GGNAPDTNYLFMGDYVDRGYYSV--E---TVTLLVALKVRY-----RDRITILRGNHESRQ 119 (272)
Q Consensus 69 ~~~~~~~~~vflGD~vDrG~~s~--e---vl~~l~~l~~~~-----p~~v~~lrGNHE~~~ 119 (272)
+...+.+.+|++||++|.+.... + .+..+.++.... +-.++++.||||...
T Consensus 41 i~~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 41 LQRLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred HHhcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 34556788999999999887532 2 233333322111 346999999999974
No 84
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=97.14 E-value=0.00092 Score=58.51 Aligned_cols=66 Identities=27% Similarity=0.340 Sum_probs=44.9
Q ss_pred CceeeeCCCCCH---------HHHHHHHHHcCCCCCC-eEEEecCccCCCCCcH-----HHHHHHHHhhHhcCCcEEEEc
Q 024080 48 PVTVCGDIHGQF---------YDLIELFRIGGNAPDT-NYLFMGDYVDRGYYSV-----ETVTLLVALKVRYRDRITILR 112 (272)
Q Consensus 48 ~i~viGDIHG~~---------~~l~~~l~~~~~~~~~-~~vflGD~vDrG~~s~-----evl~~l~~l~~~~p~~v~~lr 112 (272)
+++.++|+||.+ ..+..+++++.....+ -++..||+++..+.+. .+++.+..+ +-. ++..
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~----g~d-~~~~ 76 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNAL----GYD-AVTI 76 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhc----CCC-EEee
Confidence 578999999887 5667777776544444 4567999999877643 455555444 223 3556
Q ss_pred cCcchh
Q 024080 113 GNHESR 118 (272)
Q Consensus 113 GNHE~~ 118 (272)
||||..
T Consensus 77 GNHe~d 82 (252)
T cd00845 77 GNHEFD 82 (252)
T ss_pred cccccc
Confidence 999964
No 85
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=97.03 E-value=0.00059 Score=58.68 Aligned_cols=74 Identities=15% Similarity=0.185 Sum_probs=45.5
Q ss_pred CCCceeeeCCCCCHHHHHHHHHHcCCCCCCeEEEecCccCCCCCcHHH-------------------------HHHHHHh
Q 024080 46 KCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVET-------------------------VTLLVAL 100 (272)
Q Consensus 46 ~~~i~viGDIHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~ev-------------------------l~~l~~l 100 (272)
..++.+++|.||+++.+.++.+.+.....|-++|+||++-....+.|- ++-++..
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~ 84 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRI 84 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHH
T ss_pred chhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHH
Confidence 457899999999999999999988877889999999998554433332 2233322
Q ss_pred hHhcCCcEEEEccCcchhh
Q 024080 101 KVRYRDRITILRGNHESRQ 119 (272)
Q Consensus 101 ~~~~p~~v~~lrGNHE~~~ 119 (272)
....+-.+++|+||||...
T Consensus 85 L~~~~~p~~~vPG~~Dap~ 103 (255)
T PF14582_consen 85 LGELGVPVFVVPGNMDAPE 103 (255)
T ss_dssp HHCC-SEEEEE--TTS-SH
T ss_pred HHhcCCcEEEecCCCCchH
Confidence 2334447999999999964
No 86
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=96.95 E-value=0.0025 Score=59.63 Aligned_cols=73 Identities=22% Similarity=0.250 Sum_probs=52.6
Q ss_pred CCceeeeCCCCC-------------HHHHHHHHHHcCCCCCCeEEEecCccCCCCCcHHHHHHHHHhhHhcC---CcEEE
Q 024080 47 CPVTVCGDIHGQ-------------FYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYR---DRITI 110 (272)
Q Consensus 47 ~~i~viGDIHG~-------------~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p---~~v~~ 110 (272)
||+..++|.|=- +.+|..+++.+.....|-+|+.||+.|++.-|.+++..+.+...+.. -.|++
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~ 80 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVV 80 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEE
Confidence 578889999955 34455666666666668889999999998877776655443322211 25999
Q ss_pred EccCcchhh
Q 024080 111 LRGNHESRQ 119 (272)
Q Consensus 111 lrGNHE~~~ 119 (272)
+.||||..-
T Consensus 81 I~GNHD~~~ 89 (390)
T COG0420 81 IAGNHDSPS 89 (390)
T ss_pred ecCCCCchh
Confidence 999999974
No 87
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=96.94 E-value=0.0024 Score=51.90 Aligned_cols=66 Identities=23% Similarity=0.298 Sum_probs=47.7
Q ss_pred eeeeCCCCCHHHHHHHHHHcC--CCCCCeEEEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccCcc
Q 024080 50 TVCGDIHGQFYDLIELFRIGG--NAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHE 116 (272)
Q Consensus 50 ~viGDIHG~~~~l~~~l~~~~--~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE 116 (272)
.|+||+||+++.+.+-++.+. ..+-+-++++||+..-..++-+.-.+. .=....|--.+++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~~~~y~-~g~~~~pipTyf~ggn~~ 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEELEAYK-DGSKKVPIPTYFLGGNNP 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccchhhHHHHh-cCCccCCCCEEEECCCCC
Confidence 489999999999987777643 234577889999997666553333333 333455767999999998
No 88
>PLN02533 probable purple acid phosphatase
Probab=96.53 E-value=0.0035 Score=59.58 Aligned_cols=71 Identities=17% Similarity=0.185 Sum_probs=43.3
Q ss_pred CCCceeeeCCCCCHHHHHHHHHHcCCCCCCeEEEecCccCCCCCcH--H-HHHHHHHhhHhcCCcEEEEccCcchhh
Q 024080 46 KCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSV--E-TVTLLVALKVRYRDRITILRGNHESRQ 119 (272)
Q Consensus 46 ~~~i~viGDIHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~--e-vl~~l~~l~~~~p~~v~~lrGNHE~~~ 119 (272)
.-+++++||+|-. ......++.+.....+-++++||+++-+.... + -.+++..+....| ++.+.||||...
T Consensus 139 ~~~f~v~GDlG~~-~~~~~tl~~i~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P--~m~~~GNHE~~~ 212 (427)
T PLN02533 139 PIKFAVSGDLGTS-EWTKSTLEHVSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQRP--WMVTHGNHELEK 212 (427)
T ss_pred CeEEEEEEeCCCC-cccHHHHHHHHhcCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcCc--eEEeCccccccc
Confidence 3479999999632 22334555555456677889999997543321 1 2233333333334 889999999863
No 89
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=96.42 E-value=0.0045 Score=55.13 Aligned_cols=66 Identities=20% Similarity=0.270 Sum_probs=41.4
Q ss_pred CceeeeCCCCCH----------------HHHHHHHHHcCCCCCCeEEE-ecCccCCCCCc-----------HHHHHHHHH
Q 024080 48 PVTVCGDIHGQF----------------YDLIELFRIGGNAPDTNYLF-MGDYVDRGYYS-----------VETVTLLVA 99 (272)
Q Consensus 48 ~i~viGDIHG~~----------------~~l~~~l~~~~~~~~~~~vf-lGD~vDrG~~s-----------~evl~~l~~ 99 (272)
+|+.++|+||++ ..+..+++++.....+.+++ .||+++..+.+ ..+++.+..
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln~ 81 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMNA 81 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHHh
Confidence 578899999986 33566676665444444544 89999865522 234555554
Q ss_pred hhHhcCCcEEEEccCcchh
Q 024080 100 LKVRYRDRITILRGNHESR 118 (272)
Q Consensus 100 l~~~~p~~v~~lrGNHE~~ 118 (272)
+. . . ++..||||..
T Consensus 82 ~g---~-d-~~~lGNHe~d 95 (277)
T cd07410 82 LG---Y-D-AGTLGNHEFN 95 (277)
T ss_pred cC---C-C-EEeecccCcc
Confidence 42 1 2 5556999964
No 90
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=96.37 E-value=0.0059 Score=45.71 Aligned_cols=43 Identities=16% Similarity=0.098 Sum_probs=34.7
Q ss_pred CcchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhccCcceec
Q 024080 3 SHGDLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPV 45 (272)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~e~~~~~~ 45 (272)
|.+-++++++.++++..++...+.+|+.++.++|+++|+++++
T Consensus 53 t~efv~~mie~FK~~K~Lhkkyv~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 53 TLEFVKAMIEWFKNQKKLHKKYVYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp -HHHHHHHHHHHHCT----HHHHHHHHHHHHHHHHTS-SEEEE
T ss_pred CHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhCcCccCC
Confidence 5667999999999999999999999999999999999999874
No 91
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=96.26 E-value=0.013 Score=49.57 Aligned_cols=66 Identities=17% Similarity=0.225 Sum_probs=41.8
Q ss_pred eCCCCCHHHHHHHHHHcC-CCCCCeEEEecCccCCCCCcHH-HHHHHHHhhHhc---------------------CCcEE
Q 024080 53 GDIHGQFYDLIELFRIGG-NAPDTNYLFMGDYVDRGYYSVE-TVTLLVALKVRY---------------------RDRIT 109 (272)
Q Consensus 53 GDIHG~~~~l~~~l~~~~-~~~~~~~vflGD~vDrG~~s~e-vl~~l~~l~~~~---------------------p~~v~ 109 (272)
=|++|+=.=|....+.+. ...++.++||||++|.|--+-+ -.+...+.+..+ .-.++
T Consensus 23 ld~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i 102 (193)
T cd08164 23 LDLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLI 102 (193)
T ss_pred ehhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEE
Confidence 355666444566666553 4567889999999998754332 233444444432 13568
Q ss_pred EEccCcchh
Q 024080 110 ILRGNHESR 118 (272)
Q Consensus 110 ~lrGNHE~~ 118 (272)
.|.||||.-
T Consensus 103 ~V~GNHDIG 111 (193)
T cd08164 103 NIAGNHDVG 111 (193)
T ss_pred EECCcccCC
Confidence 999999984
No 92
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=95.98 E-value=0.013 Score=48.66 Aligned_cols=45 Identities=24% Similarity=0.285 Sum_probs=35.4
Q ss_pred CCCCeEEEecCcc--CCCCCcHHHHHHHHHhhHhcCCcEEEEccCcchhhh
Q 024080 72 APDTNYLFMGDYV--DRGYYSVETVTLLVALKVRYRDRITILRGNHESRQI 120 (272)
Q Consensus 72 ~~~~~~vflGD~v--DrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~ 120 (272)
.+.|.++.-||+- -|=++..+-+.++-+| |+.-+++|||||.+.-
T Consensus 42 ~~eDiVllpGDiSWaM~l~ea~~Dl~~i~~L----PG~K~m~rGNHDYWw~ 88 (230)
T COG1768 42 SPEDIVLLPGDISWAMRLEEAEEDLRFIGDL----PGTKYMIRGNHDYWWS 88 (230)
T ss_pred ChhhEEEecccchhheechhhhhhhhhhhcC----CCcEEEEecCCccccc
Confidence 3456667799985 4566777788888888 9999999999999753
No 93
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=95.81 E-value=0.018 Score=50.75 Aligned_cols=66 Identities=20% Similarity=0.206 Sum_probs=41.7
Q ss_pred CceeeeCCCCCH----------HHHHHHHHHcCCCCCCeEEEecCccCCCCCc-----HHHHHHHHHhhHhcCCcEEEEc
Q 024080 48 PVTVCGDIHGQF----------YDLIELFRIGGNAPDTNYLFMGDYVDRGYYS-----VETVTLLVALKVRYRDRITILR 112 (272)
Q Consensus 48 ~i~viGDIHG~~----------~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s-----~evl~~l~~l~~~~p~~v~~lr 112 (272)
+++.++|+||++ ..+..++++....+..-++..||.++..+.+ ..+++.+..+ .-.+ ...
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~----g~d~-~~~ 76 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIMNAV----GYDA-VTP 76 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhc----CCcE-Ecc
Confidence 577899999974 4456666666433445566799999876533 2344444443 2134 456
Q ss_pred cCcchh
Q 024080 113 GNHESR 118 (272)
Q Consensus 113 GNHE~~ 118 (272)
||||..
T Consensus 77 GNHefd 82 (257)
T cd07408 77 GNHEFD 82 (257)
T ss_pred cccccc
Confidence 999964
No 94
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=95.70 E-value=0.032 Score=48.54 Aligned_cols=104 Identities=18% Similarity=0.207 Sum_probs=61.9
Q ss_pred cCCCceeeeCCCCCHHHHH----------------HHHH-HcCCCCCCeEEEecCccCCCCC----c-HHHHHHHHHhhH
Q 024080 45 VKCPVTVCGDIHGQFYDLI----------------ELFR-IGGNAPDTNYLFMGDYVDRGYY----S-VETVTLLVALKV 102 (272)
Q Consensus 45 ~~~~i~viGDIHG~~~~l~----------------~~l~-~~~~~~~~~~vflGD~vDrG~~----s-~evl~~l~~l~~ 102 (272)
...++.||+|+|=-|.... +.+. .+...+.+++|++||+-.-.+. . .++-.++..+..
T Consensus 18 ~~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~ 97 (235)
T COG1407 18 PLGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDE 97 (235)
T ss_pred ccCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhcc
Confidence 3578999999996555433 2332 2334567889999999854333 2 333333333322
Q ss_pred hcCCcEEEEccCcchhhhhhhhCChHHHHHHhCChhHHHHHHHHhhccCceEEEcCcEEEecCCCCCCCC
Q 024080 103 RYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQIFCLHGGLSPSLD 172 (272)
Q Consensus 103 ~~p~~v~~lrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~l~vHaGi~p~~~ 172 (272)
. .++.++||||...-....++.- +. ++.. . .++++++||=-.+...
T Consensus 98 -~--evi~i~GNHD~~i~~~~~~~~v----------------~v---~~~~-~-i~~~~~~HGh~~~~~~ 143 (235)
T COG1407 98 -R--EVIIIRGNHDNGIEEILPGFNV----------------EV---VDEL-E-IGGLLFRHGHKEPEPE 143 (235)
T ss_pred -C--cEEEEeccCCCccccccccCCc----------------ee---eeeE-E-ecCEEEEeCCCCCccc
Confidence 2 5999999999986443333210 11 1222 2 3789999997655443
No 95
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=95.58 E-value=0.027 Score=49.88 Aligned_cols=69 Identities=20% Similarity=0.202 Sum_probs=39.9
Q ss_pred CceeeeCCCCC--H--HHHHHH-HHHcCCCCCCeEEEecCcc-CCCCCcH------HHHHHHHH-hhHhcCCcEEEEccC
Q 024080 48 PVTVCGDIHGQ--F--YDLIEL-FRIGGNAPDTNYLFMGDYV-DRGYYSV------ETVTLLVA-LKVRYRDRITILRGN 114 (272)
Q Consensus 48 ~i~viGDIHG~--~--~~l~~~-l~~~~~~~~~~~vflGD~v-DrG~~s~------evl~~l~~-l~~~~p~~v~~lrGN 114 (272)
+++++||.=.. . .++... .+.+...+.+-+|++||++ +-|..+. +.+..++. +. ..-.++.+.||
T Consensus 2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~--~~~P~~~v~GN 79 (277)
T cd07378 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPS--LQVPWYLVLGN 79 (277)
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchh--hcCCeEEecCC
Confidence 57899998764 1 223333 3333334567788999987 5554221 22222222 21 12359999999
Q ss_pred cchh
Q 024080 115 HESR 118 (272)
Q Consensus 115 HE~~ 118 (272)
||..
T Consensus 80 HD~~ 83 (277)
T cd07378 80 HDYS 83 (277)
T ss_pred cccC
Confidence 9986
No 96
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=95.50 E-value=0.021 Score=51.31 Aligned_cols=66 Identities=24% Similarity=0.365 Sum_probs=42.5
Q ss_pred CceeeeCCCCCHH--------------HHHHHHHHcCCC-CCCeEEEecCccCCCCC-c-----HHHHHHHHHhhHhcCC
Q 024080 48 PVTVCGDIHGQFY--------------DLIELFRIGGNA-PDTNYLFMGDYVDRGYY-S-----VETVTLLVALKVRYRD 106 (272)
Q Consensus 48 ~i~viGDIHG~~~--------------~l~~~l~~~~~~-~~~~~vflGD~vDrG~~-s-----~evl~~l~~l~~~~p~ 106 (272)
+++.++|+||++. .+..++++.... +..-++..||++...+. + ..+++.+.++..
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g~---- 77 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMGV---- 77 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhCC----
Confidence 5788999999854 366667666433 33445679999986654 2 245666555521
Q ss_pred cEEEEccCcchh
Q 024080 107 RITILRGNHESR 118 (272)
Q Consensus 107 ~v~~lrGNHE~~ 118 (272)
. .+..||||.-
T Consensus 78 D-a~t~GNHefd 88 (288)
T cd07412 78 D-ASAVGNHEFD 88 (288)
T ss_pred e-eeeecccccc
Confidence 3 4556999964
No 97
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=95.50 E-value=0.0053 Score=57.98 Aligned_cols=114 Identities=13% Similarity=0.004 Sum_probs=93.0
Q ss_pred CCCHHHHHHHHHHHHHHHhccCcceecC----CCceeeeCCCCCHHHHHHHHHHcCCCCC-CeEEEecCccCCCCCcHHH
Q 024080 19 PLPEAEVKTLCDQARAILVEEWNVQPVK----CPVTVCGDIHGQFYDLIELFRIGGNAPD-TNYLFMGDYVDRGYYSVET 93 (272)
Q Consensus 19 ~~~~~~~~~l~~~~~~~l~~e~~~~~~~----~~i~viGDIHG~~~~l~~~l~~~~~~~~-~~~vflGD~vDrG~~s~ev 93 (272)
.+....+..+++.+.+++..+|+..... --.+.++|.||...++..+++.- +.. .-|++-|++++++....+.
T Consensus 14 ~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d--P~~~K~Y~rrg~a~m~l~~~~~A 91 (476)
T KOG0376|consen 14 ALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD--PTYIKAYVRRGTAVMALGEFKKA 91 (476)
T ss_pred hcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC--chhhheeeeccHHHHhHHHHHHH
Confidence 4677888899999999999999865542 24789999999999998888753 332 4488999999999999999
Q ss_pred HHHHHHhhHhcCCcEEEEccCcchhhhhhhhCChHHHHHHh
Q 024080 94 VTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKY 134 (272)
Q Consensus 94 l~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~g~~~e~~~~~ 134 (272)
+..+...+...|++..+.|++||+..+-..++|..+....+
T Consensus 92 ~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~ 132 (476)
T KOG0376|consen 92 LLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPE 132 (476)
T ss_pred HHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCc
Confidence 99999999999999999999999998877777665444444
No 98
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.11 E-value=0.23 Score=40.12 Aligned_cols=61 Identities=28% Similarity=0.353 Sum_probs=46.0
Q ss_pred ceeeeCCCC--CHHHHHHHHHHcCCCCC-CeEEEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccCcchh
Q 024080 49 VTVCGDIHG--QFYDLIELFRIGGNAPD-TNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESR 118 (272)
Q Consensus 49 i~viGDIHG--~~~~l~~~l~~~~~~~~-~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 118 (272)
+.++||+|= +..+|-.-++++-.++. .+++++|++. |.|+++++..+ .++++++||-.|.-
T Consensus 3 vL~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNlc-----s~e~~dylk~l----~~dvhiVrGeFD~~ 66 (183)
T KOG3325|consen 3 VLVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNLC-----SKESYDYLKTL----SSDVHIVRGEFDEN 66 (183)
T ss_pred EEEeccccCCccccccCHHHHhccCCCceeEEEEeCCcc-----hHHHHHHHHhh----CCCcEEEecccCcc
Confidence 578999994 44556566666555554 5688999975 56999999988 46899999987765
No 99
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=94.87 E-value=0.051 Score=48.10 Aligned_cols=65 Identities=22% Similarity=0.186 Sum_probs=38.8
Q ss_pred CceeeeCCCCCH----------------------HHHHHHHHHcCCC-CCCeE-EEecCccCCCCCc-----HHHHHHHH
Q 024080 48 PVTVCGDIHGQF----------------------YDLIELFRIGGNA-PDTNY-LFMGDYVDRGYYS-----VETVTLLV 98 (272)
Q Consensus 48 ~i~viGDIHG~~----------------------~~l~~~l~~~~~~-~~~~~-vflGD~vDrG~~s-----~evl~~l~ 98 (272)
.++.++|+||++ ..+..+++++... ..+.+ +..||+++..+.+ ..+++.+.
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~ 81 (264)
T cd07411 2 TLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALN 81 (264)
T ss_pred EEEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHH
Confidence 356778888874 3345566665433 34444 4599999876643 23455555
Q ss_pred HhhHhcCCcEEEEccCcchh
Q 024080 99 ALKVRYRDRITILRGNHESR 118 (272)
Q Consensus 99 ~l~~~~p~~v~~lrGNHE~~ 118 (272)
.+ +-. .+. ||||..
T Consensus 82 ~~----g~d-a~~-GNHefd 95 (264)
T cd07411 82 AL----GVD-AMV-GHWEFT 95 (264)
T ss_pred hh----CCe-EEe-cccccc
Confidence 44 223 333 999964
No 100
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=94.74 E-value=0.088 Score=48.28 Aligned_cols=74 Identities=22% Similarity=0.328 Sum_probs=48.7
Q ss_pred CCceeeeCCCCCHHHHHH---HHHHcCCCCCCeEEEecCccC-CCC---CcHHH---HHHHHHh------hHhcCCcEEE
Q 024080 47 CPVTVCGDIHGQFYDLIE---LFRIGGNAPDTNYLFMGDYVD-RGY---YSVET---VTLLVAL------KVRYRDRITI 110 (272)
Q Consensus 47 ~~i~viGDIHG~~~~l~~---~l~~~~~~~~~~~vflGD~vD-rG~---~s~ev---l~~l~~l------~~~~p~~v~~ 110 (272)
|||.|=|--||.++.+-+ ..++.|..+.|.+++.||+=. |.. +++.| +..+... ...+|--.++
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 689999999999999874 445566678888999999853 221 12222 1111111 1235555678
Q ss_pred EccCcchhhh
Q 024080 111 LRGNHESRQI 120 (272)
Q Consensus 111 lrGNHE~~~~ 120 (272)
+-||||.+..
T Consensus 81 IGGNHEAsny 90 (456)
T KOG2863|consen 81 IGGNHEASNY 90 (456)
T ss_pred ecCchHHHHH
Confidence 9999999853
No 101
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=94.43 E-value=0.1 Score=46.62 Aligned_cols=66 Identities=18% Similarity=0.191 Sum_probs=39.6
Q ss_pred CceeeeCCCCCH---------------------HHHHHHHHHcCCCCCCeE-EEecCccCCCCC-----cHHHHHHHHHh
Q 024080 48 PVTVCGDIHGQF---------------------YDLIELFRIGGNAPDTNY-LFMGDYVDRGYY-----SVETVTLLVAL 100 (272)
Q Consensus 48 ~i~viGDIHG~~---------------------~~l~~~l~~~~~~~~~~~-vflGD~vDrG~~-----s~evl~~l~~l 100 (272)
+++.++|+||++ ..+..++++........+ +-.||++...+. ...+++.+..+
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~~ 81 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNLL 81 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHhc
Confidence 467789999874 445566666543333434 458999987653 23344544444
Q ss_pred hHhcCCcEEEEccCcchh
Q 024080 101 KVRYRDRITILRGNHESR 118 (272)
Q Consensus 101 ~~~~p~~v~~lrGNHE~~ 118 (272)
. -.+ +..||||..
T Consensus 82 g----~D~-~~lGNHefd 94 (281)
T cd07409 82 G----YDA-MTLGNHEFD 94 (281)
T ss_pred C----CCE-EEecccccc
Confidence 2 134 445999974
No 102
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=94.41 E-value=0.091 Score=47.09 Aligned_cols=72 Identities=21% Similarity=0.230 Sum_probs=43.6
Q ss_pred ceeeeCCCCC--HHHHHHHHHHcCCC--CCCeEEEecCccCCCCCcH--H-----HHH-HHHHhhHhcCC-cEEEEccCc
Q 024080 49 VTVCGDIHGQ--FYDLIELFRIGGNA--PDTNYLFMGDYVDRGYYSV--E-----TVT-LLVALKVRYRD-RITILRGNH 115 (272)
Q Consensus 49 i~viGDIHG~--~~~l~~~l~~~~~~--~~~~~vflGD~vDrG~~s~--e-----vl~-~l~~l~~~~p~-~v~~lrGNH 115 (272)
.--.|+-.-+ ...+..+++.+... +.+-+|++||+++.+.... + ... +...++..+|+ .++.+.|||
T Consensus 40 ~~~~G~~~CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNH 119 (296)
T cd00842 40 AGPWGDYGCDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNH 119 (296)
T ss_pred CCCCcCcCCCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCC
Confidence 4445666422 24456677766533 6677889999998876431 1 122 22234433343 699999999
Q ss_pred chhhh
Q 024080 116 ESRQI 120 (272)
Q Consensus 116 E~~~~ 120 (272)
|..-.
T Consensus 120 D~~p~ 124 (296)
T cd00842 120 DSYPV 124 (296)
T ss_pred CCCcc
Confidence 98754
No 103
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=94.25 E-value=1.4 Score=42.04 Aligned_cols=191 Identities=18% Similarity=0.200 Sum_probs=94.4
Q ss_pred CceeeeCCCC-C----HHHHHHHHHHcCCC----CCCeE-EEecCccCC-CC-----------CcHHHHHHHHHhhHhcC
Q 024080 48 PVTVCGDIHG-Q----FYDLIELFRIGGNA----PDTNY-LFMGDYVDR-GY-----------YSVETVTLLVALKVRYR 105 (272)
Q Consensus 48 ~i~viGDIHG-~----~~~l~~~l~~~~~~----~~~~~-vflGD~vDr-G~-----------~s~evl~~l~~l~~~~p 105 (272)
.+++++|+|= . -+.+...++-++-+ +..+| +..||.||. |- +..+-++.+..+..+-|
T Consensus 227 ~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~vp 306 (481)
T COG1311 227 YVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQVP 306 (481)
T ss_pred EEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhhCC
Confidence 5889999995 2 22333444433322 22355 468999994 21 23344555555555556
Q ss_pred C--cEEEEccCcchhhhhhhhCChHH-HHHHhCChhHHHHHHHHhhccCceEEEc-CcEEEecCCC-------CCCCCc-
Q 024080 106 D--RITILRGNHESRQITQVYGFYDE-CLRKYGNANVWKYFTDLFDYLPLTALIE-SQIFCLHGGL-------SPSLDT- 173 (272)
Q Consensus 106 ~--~v~~lrGNHE~~~~~~~~g~~~e-~~~~~~~~~~~~~~~~~~~~lPl~~~~~-~~~l~vHaGi-------~p~~~~- 173 (272)
. .+++.+||||..-.........+ ....|. ...-.+=.=|...-++ .+++..||=- -|..+.
T Consensus 307 ~~I~v~i~PGnhDa~r~a~PQp~~~~~~kslf~------~~n~~~v~NP~~~~l~G~~vL~~hG~sidDii~~vP~~~~~ 380 (481)
T COG1311 307 EHIKVFIMPGNHDAVRQALPQPHFPELIKSLFS------LNNLLFVSNPALVSLHGVDVLIYHGRSIDDIIKLVPGADYD 380 (481)
T ss_pred CCceEEEecCCCCccccccCCCCcchhhccccc------ccceEecCCCcEEEECCEEEEEecCCCHHHHHhhCCCCCcc
Confidence 6 57899999999754322211111 111111 1100111113333333 3688888741 111100
Q ss_pred --HHHHhhccccccCCCCCccccccccCCCCCCCCccCCCCCccccCHHHHHHHHHHcCCcEEEEcCCCCccCeeEeCCC
Q 024080 174 --LDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQVW 251 (272)
Q Consensus 174 --~~~i~~i~r~~~~~~~~~~~~llW~dp~~~~~~~~~~~g~~~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~ 251 (272)
..-++++-+.... ..+..+-+|.-|...+.+-.. ---+.+..||+.. .|+..+.+.
T Consensus 381 ~~~~ame~lLk~rHl--aPtygg~~p~aP~~kD~lVIe-------------------evPDv~~~Ghvh~-~g~~~y~gv 438 (481)
T COG1311 381 SPLKAMEELLKRRHL--APTYGGTLPIAPETKDYLVIE-------------------EVPDVFHTGHVHK-FGTGVYEGV 438 (481)
T ss_pred chHHHHHHHHHhccc--CCCCCCccccccCCcCceeec-------------------cCCcEEEEccccc-cceeEEecc
Confidence 1111111111110 112234455554432221100 0126789999986 788888788
Q ss_pred eEEEEeccccccccc
Q 024080 252 NLKDHASFCFFSHFH 266 (272)
Q Consensus 252 ~li~i~s~~~~~~~~ 266 (272)
+++...+|.-+..|.
T Consensus 439 ~~vns~T~q~qTefq 453 (481)
T COG1311 439 NLVNSGTWQEQTEFQ 453 (481)
T ss_pred ceEEeeeecchhccc
Confidence 888888887776654
No 104
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=94.10 E-value=0.13 Score=48.31 Aligned_cols=47 Identities=21% Similarity=0.382 Sum_probs=35.1
Q ss_pred CCCCeEEEecCccCCCCCc--HHHHHHHHHhhHhcCC----cEEEEccCcchh
Q 024080 72 APDTNYLFMGDYVDRGYYS--VETVTLLVALKVRYRD----RITILRGNHESR 118 (272)
Q Consensus 72 ~~~~~~vflGD~vDrG~~s--~evl~~l~~l~~~~p~----~v~~lrGNHE~~ 118 (272)
..++-++||||++|-|... -|=-+...+++..++. .+..+.||||.=
T Consensus 92 lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDIG 144 (410)
T KOG3662|consen 92 LKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGRKGNIKVIYIAGNHDIG 144 (410)
T ss_pred cCCCEEEEeccccccCccCChHHHHHHHHHHHHhhCCCCCCeeEEeCCccccc
Confidence 4566778999999988753 4455666677766665 688999999974
No 105
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=93.58 E-value=0.092 Score=56.07 Aligned_cols=67 Identities=18% Similarity=0.251 Sum_probs=43.7
Q ss_pred CCceeeeCCCCCH---HHHHHHHHHcCCCCCCeEEE-ecCccCCCCCc-----HHHHHHHHHhhHhcCCcEEEEccCcch
Q 024080 47 CPVTVCGDIHGQF---YDLIELFRIGGNAPDTNYLF-MGDYVDRGYYS-----VETVTLLVALKVRYRDRITILRGNHES 117 (272)
Q Consensus 47 ~~i~viGDIHG~~---~~l~~~l~~~~~~~~~~~vf-lGD~vDrG~~s-----~evl~~l~~l~~~~p~~v~~lrGNHE~ 117 (272)
-+++.++|+||.+ ..+..+++++.....+.+++ .||++++.+.+ ..+++.+..+. --+...||||.
T Consensus 661 l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg-----~d~~~~GNHEf 735 (1163)
T PRK09419 661 LTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMG-----YDASTFGNHEF 735 (1163)
T ss_pred EEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCcC-----CCEEEeccccc
Confidence 3689999999885 44555666554333444544 89999877644 24555555442 23569999997
Q ss_pred h
Q 024080 118 R 118 (272)
Q Consensus 118 ~ 118 (272)
.
T Consensus 736 d 736 (1163)
T PRK09419 736 D 736 (1163)
T ss_pred c
Confidence 4
No 106
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=93.50 E-value=0.15 Score=44.94 Aligned_cols=64 Identities=23% Similarity=0.195 Sum_probs=41.3
Q ss_pred ceeeeCCC----------CCHHHHHHHHHHcCCCCCC-eEEEecCccCCCCC-----cHHHHHHHHHhhHhcCCcEEEEc
Q 024080 49 VTVCGDIH----------GQFYDLIELFRIGGNAPDT-NYLFMGDYVDRGYY-----SVETVTLLVALKVRYRDRITILR 112 (272)
Q Consensus 49 i~viGDIH----------G~~~~l~~~l~~~~~~~~~-~~vflGD~vDrG~~-----s~evl~~l~~l~~~~p~~v~~lr 112 (272)
+.-+.|+| |-+..+..++++......+ -++..||+++..+. ...+++.+..+. -.+...
T Consensus 3 il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~-----~d~~~~ 77 (257)
T cd07406 3 ILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALG-----VDLACF 77 (257)
T ss_pred EEEEccceeecccCCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcC-----CcEEee
Confidence 44556666 4467777888776543344 45579999987753 245666666552 235678
Q ss_pred cCcch
Q 024080 113 GNHES 117 (272)
Q Consensus 113 GNHE~ 117 (272)
||||.
T Consensus 78 GNHef 82 (257)
T cd07406 78 GNHEF 82 (257)
T ss_pred ccccc
Confidence 99996
No 107
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=93.42 E-value=0.21 Score=44.48 Aligned_cols=67 Identities=13% Similarity=0.080 Sum_probs=49.5
Q ss_pred CCceeeeCCCCC--HHHHHHHHHHcCCC-CCCeEEEecCccCCC-CCcHHHHHHHHHhhHhcCCcEEEEccCcchh
Q 024080 47 CPVTVCGDIHGQ--FYDLIELFRIGGNA-PDTNYLFMGDYVDRG-YYSVETVTLLVALKVRYRDRITILRGNHESR 118 (272)
Q Consensus 47 ~~i~viGDIHG~--~~~l~~~l~~~~~~-~~~~~vflGD~vDrG-~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 118 (272)
||+.+||||=|. ...+...|..+... +.+-+|.-||....| .-+.++.+.|.+. .-+++.+ |||+.-
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~----GvDviT~-GNH~~D 71 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQS----GVNYITM-GNHTWF 71 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhc----CCCEEEc-cchhcc
Confidence 689999999999 56677777776533 345555689998766 4577888888877 3356666 999986
No 108
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=92.97 E-value=0.31 Score=44.53 Aligned_cols=71 Identities=18% Similarity=0.225 Sum_probs=43.6
Q ss_pred CceeeeCCCCCHH-----------------HHH--HHHH-HcCCCCCCeEEEecCccCCCCCcHH---HHHHHHHhhHhc
Q 024080 48 PVTVCGDIHGQFY-----------------DLI--ELFR-IGGNAPDTNYLFMGDYVDRGYYSVE---TVTLLVALKVRY 104 (272)
Q Consensus 48 ~i~viGDIHG~~~-----------------~l~--~~l~-~~~~~~~~~~vflGD~vDrG~~s~e---vl~~l~~l~~~~ 104 (272)
+|+.+.|+|=... ++. ..++ .+.....|-+||+||.|+. ..... ++....+-.+.+
T Consensus 55 KIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g-~~t~Da~~sl~kAvaP~I~~ 133 (379)
T KOG1432|consen 55 KILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFG-HSTQDAATSLMKAVAPAIDR 133 (379)
T ss_pred EEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCcccc-cccHhHHHHHHHHhhhHhhc
Confidence 6899999996554 221 1222 2234556888999999985 44433 333333333333
Q ss_pred CCcEEEEccCcchhh
Q 024080 105 RDRITILRGNHESRQ 119 (272)
Q Consensus 105 p~~v~~lrGNHE~~~ 119 (272)
.=-...+.||||..-
T Consensus 134 ~IPwA~~lGNHDdes 148 (379)
T KOG1432|consen 134 KIPWAAVLGNHDDES 148 (379)
T ss_pred CCCeEEEeccccccc
Confidence 334678999999974
No 109
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=92.34 E-value=0.87 Score=42.76 Aligned_cols=73 Identities=10% Similarity=0.035 Sum_probs=41.8
Q ss_pred CCCceeeeCCC-CCHHHHH--HHHHHcC-CCCCCeEEEecCccCCCCCcHH------HHHHHHHhhH-hcCCcEEEEccC
Q 024080 46 KCPVTVCGDIH-GQFYDLI--ELFRIGG-NAPDTNYLFMGDYVDRGYYSVE------TVTLLVALKV-RYRDRITILRGN 114 (272)
Q Consensus 46 ~~~i~viGDIH-G~~~~l~--~~l~~~~-~~~~~~~vflGD~vDrG~~s~e------vl~~l~~l~~-~~p~~v~~lrGN 114 (272)
+-+.+++||-= |.+.... +.+.... ..+.+-+|-+||-++.|..++. ..+-+..-.. .-.-..++++||
T Consensus 26 ~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~vLGN 105 (394)
T PTZ00422 26 QLRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVLGQ 105 (394)
T ss_pred eEEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeEEeCCc
Confidence 34799999953 3333222 2233222 3445566779998888877543 3444442211 001258999999
Q ss_pred cchh
Q 024080 115 HESR 118 (272)
Q Consensus 115 HE~~ 118 (272)
||..
T Consensus 106 HDy~ 109 (394)
T PTZ00422 106 ADWD 109 (394)
T ss_pred cccc
Confidence 9974
No 110
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=91.19 E-value=0.32 Score=43.59 Aligned_cols=66 Identities=18% Similarity=0.080 Sum_probs=37.2
Q ss_pred CceeeeCCCCCHHH----------HHHHHHHcCC-----CCCCeEEEecCccCCCCC-----cHHHHHHHHHhhHhcCCc
Q 024080 48 PVTVCGDIHGQFYD----------LIELFRIGGN-----APDTNYLFMGDYVDRGYY-----SVETVTLLVALKVRYRDR 107 (272)
Q Consensus 48 ~i~viGDIHG~~~~----------l~~~l~~~~~-----~~~~~~vflGD~vDrG~~-----s~evl~~l~~l~~~~p~~ 107 (272)
.|+.+.|+||++.. +..+++++.. .+..-++-.||.+...+. ...+++.+-.+.. .
T Consensus 2 tIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g~----D 77 (285)
T cd07405 2 TILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGY----D 77 (285)
T ss_pred EEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhCC----c
Confidence 46788999998533 4455554422 233334459999844332 2334555555421 3
Q ss_pred EEEEccCcchh
Q 024080 108 ITILRGNHESR 118 (272)
Q Consensus 108 v~~lrGNHE~~ 118 (272)
+ ...||||.-
T Consensus 78 a-~~~GNHEfD 87 (285)
T cd07405 78 A-MAVGNHEFD 87 (285)
T ss_pred E-Eeecccccc
Confidence 4 444999965
No 111
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=90.75 E-value=0.6 Score=39.48 Aligned_cols=72 Identities=11% Similarity=0.152 Sum_probs=40.9
Q ss_pred ceeeeCCCCC-----HHHHHHHHHHcC-CCCCCeEEEecCccCCCCCcH----------HHHHHHHHhhHhc-----CCc
Q 024080 49 VTVCGDIHGQ-----FYDLIELFRIGG-NAPDTNYLFMGDYVDRGYYSV----------ETVTLLVALKVRY-----RDR 107 (272)
Q Consensus 49 i~viGDIHG~-----~~~l~~~l~~~~-~~~~~~~vflGD~vDrG~~s~----------evl~~l~~l~~~~-----p~~ 107 (272)
|++++|+|-. ++.|.++|+.+. ....+.+|++|+++|.-.... .....+..+.... .-+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 4677888765 556677777777 666788999999999632221 1122222222211 237
Q ss_pred EEEEccCcchhhh
Q 024080 108 ITILRGNHESRQI 120 (272)
Q Consensus 108 v~~lrGNHE~~~~ 120 (272)
|+++.|+||-...
T Consensus 81 vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 81 VVLVPGPNDPTSS 93 (209)
T ss_dssp EEEE--TTCTT-S
T ss_pred EEEeCCCcccccc
Confidence 9999999998754
No 112
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=90.35 E-value=0.53 Score=44.71 Aligned_cols=34 Identities=6% Similarity=-0.129 Sum_probs=28.2
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCccCeeEeCCCeE
Q 024080 220 DIASQFNHTNGLSLISRAHQLVMEGYNWCQVWNL 253 (272)
Q Consensus 220 ~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~l 253 (272)
..++..+.++++++++-||.-.-+.+.+..+.++
T Consensus 322 ~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~ 355 (452)
T KOG1378|consen 322 EGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTC 355 (452)
T ss_pred HHHHHHHHHhceeEEEeccceehhccchhhccee
Confidence 3688999999999999999877777777667665
No 113
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=89.02 E-value=1.1 Score=39.69 Aligned_cols=66 Identities=17% Similarity=0.123 Sum_probs=45.6
Q ss_pred CceeeeCCCCCHHH--HHHHHHHcCCC-CCCeEEEecCccCCC-CCcHHHHHHHHHhhHhcCCcEEEEccCcchh
Q 024080 48 PVTVCGDIHGQFYD--LIELFRIGGNA-PDTNYLFMGDYVDRG-YYSVETVTLLVALKVRYRDRITILRGNHESR 118 (272)
Q Consensus 48 ~i~viGDIHG~~~~--l~~~l~~~~~~-~~~~~vflGD~vDrG-~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 118 (272)
|+.+||||=|.... +...|..+... +.+-+|--||..-.| .-+.++.+.+..+- -.+..+ ||||.-
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G----~D~iTl-GNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAG----VDVITM-GNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcC----CCEEEe-cccccC
Confidence 57899999998664 45666655432 334455589998766 46778888888773 355555 999865
No 114
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=88.66 E-value=0.31 Score=46.19 Aligned_cols=42 Identities=26% Similarity=0.427 Sum_probs=35.1
Q ss_pred CCeEEEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccCcchhhh
Q 024080 74 DTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQI 120 (272)
Q Consensus 74 ~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~ 120 (272)
.|++-.+||+-||||.+-.+++-|... + .+-+=.||||...+
T Consensus 191 VDhLHiVGDIyDRGP~pd~Imd~L~~y----h-svDiQWGNHDilWm 232 (648)
T COG3855 191 VDHLHIVGDIYDRGPYPDKIMDTLINY----H-SVDIQWGNHDILWM 232 (648)
T ss_pred hhheeeecccccCCCCchHHHHHHhhc----c-cccccccCcceEEe
Confidence 466778999999999999999988866 3 57788999998644
No 115
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=88.58 E-value=2.7 Score=40.11 Aligned_cols=39 Identities=21% Similarity=0.078 Sum_probs=29.2
Q ss_pred CHHHHHHHHHHcCCc----EEEEcCCCCccC--e-eEeCCCeEEEE
Q 024080 218 GQDIASQFNHTNGLS----LISRAHQLVMEG--Y-NWCQVWNLKDH 256 (272)
Q Consensus 218 g~~~~~~fl~~~~~~----~iirgH~~~~~G--~-~~~~~~~li~i 256 (272)
.++...++|+..|++ .||.||+|+.++ = ..-.+|+++.|
T Consensus 514 de~ic~kil~eFGLdpe~ghiINGHtPVke~~GE~PIKAngKliVI 559 (648)
T COG3855 514 DEEICRKILEEFGLDPEGGHIINGHTPVKEKNGENPIKANGKLIVI 559 (648)
T ss_pred hHHHHHHHHHHhCCCcccCceecCCCcccccCCCCCccCCCeEEEE
Confidence 355666788888887 899999999753 2 33468898877
No 116
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=88.58 E-value=0.63 Score=45.31 Aligned_cols=69 Identities=26% Similarity=0.259 Sum_probs=44.9
Q ss_pred CCCceeeeCCCCCHH---------------HHHHHHHHcCCCCCCe-EEEecCccCCCC------CcHHHHHHHHHhhHh
Q 024080 46 KCPVTVCGDIHGQFY---------------DLIELFRIGGNAPDTN-YLFMGDYVDRGY------YSVETVTLLVALKVR 103 (272)
Q Consensus 46 ~~~i~viGDIHG~~~---------------~l~~~l~~~~~~~~~~-~vflGD~vDrG~------~s~evl~~l~~l~~~ 103 (272)
+-+|+-..|+||++. ....++++........ +|=.||++++.+ .....++.+-.+.
T Consensus 26 ~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~-- 103 (517)
T COG0737 26 KLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALG-- 103 (517)
T ss_pred eEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcC--
Confidence 447899999999998 3334444443222233 445999999843 3345666666663
Q ss_pred cCCcEEEEccCcchhh
Q 024080 104 YRDRITILRGNHESRQ 119 (272)
Q Consensus 104 ~p~~v~~lrGNHE~~~ 119 (272)
-=..-.||||.-.
T Consensus 104 ---yDa~tiGNHEFd~ 116 (517)
T COG0737 104 ---YDAMTLGNHEFDY 116 (517)
T ss_pred ---CcEEeeccccccc
Confidence 2367889999874
No 117
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=88.37 E-value=0.82 Score=41.64 Aligned_cols=66 Identities=23% Similarity=0.193 Sum_probs=40.7
Q ss_pred CceeeeCCCCCHH------HHHHHHHHcCC-----CCCCeEEEecCccCCCCC-------------cHHHHHHHHHhhHh
Q 024080 48 PVTVCGDIHGQFY------DLIELFRIGGN-----APDTNYLFMGDYVDRGYY-------------SVETVTLLVALKVR 103 (272)
Q Consensus 48 ~i~viGDIHG~~~------~l~~~l~~~~~-----~~~~~~vflGD~vDrG~~-------------s~evl~~l~~l~~~ 103 (272)
.|+-..|+||++. .+..++++... .+..-++..||.+..++. ...+++++-.+.
T Consensus 2 ~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g-- 79 (313)
T cd08162 2 QLLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALG-- 79 (313)
T ss_pred eEEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccC--
Confidence 3567889999964 34444554422 233445569999876543 344556665553
Q ss_pred cCCcEEEEccCcchh
Q 024080 104 YRDRITILRGNHESR 118 (272)
Q Consensus 104 ~p~~v~~lrGNHE~~ 118 (272)
--.+..||||.-
T Consensus 80 ---~Da~tlGNHEFD 91 (313)
T cd08162 80 ---VQAIALGNHEFD 91 (313)
T ss_pred ---CcEEeccccccc
Confidence 236789999964
No 118
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=88.21 E-value=1.2 Score=42.35 Aligned_cols=69 Identities=20% Similarity=0.335 Sum_probs=52.0
Q ss_pred CCCceeeeCCCCCHHHHHHHHHHcCC--CCCCeEEEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccCc
Q 024080 46 KCPVTVCGDIHGQFYDLIELFRIGGN--APDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNH 115 (272)
Q Consensus 46 ~~~i~viGDIHG~~~~l~~~l~~~~~--~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNH 115 (272)
+.+|.|+||.-|+++.|.+-++++.. .+-+-++++|++.+--.++.|++.+.-.-+ .-|-.++++-+|.
T Consensus 5 ~~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~~-~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 5 DAKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGTK-KVPIPTYFLGDNA 75 (528)
T ss_pred CceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCCc-cCceeEEEecCCC
Confidence 46899999999999999887777653 345778899999987667778877765442 3465677777665
No 119
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=87.74 E-value=0.77 Score=41.19 Aligned_cols=66 Identities=17% Similarity=0.073 Sum_probs=38.5
Q ss_pred CceeeeCCCCCHHH-------------HHHHHHHc----CCCCCC-eEEEecCccCCCCCc-------HHHHHHHHHhhH
Q 024080 48 PVTVCGDIHGQFYD-------------LIELFRIG----GNAPDT-NYLFMGDYVDRGYYS-------VETVTLLVALKV 102 (272)
Q Consensus 48 ~i~viGDIHG~~~~-------------l~~~l~~~----~~~~~~-~~vflGD~vDrG~~s-------~evl~~l~~l~~ 102 (272)
+|+-+.|+||++.. +.++.+.+ ...... -++-.||.+..-+.+ ..+++++-.+.
T Consensus 7 tILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~mg- 85 (282)
T cd07407 7 NFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMMP- 85 (282)
T ss_pred EEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhcC-
Confidence 68889999998641 22222222 222223 344599999865432 23455555552
Q ss_pred hcCCcEEEEccCcchh
Q 024080 103 RYRDRITILRGNHESR 118 (272)
Q Consensus 103 ~~p~~v~~lrGNHE~~ 118 (272)
--.+..||||..
T Consensus 86 ----yDa~tlGNHEFd 97 (282)
T cd07407 86 ----YDLLTIGNHELY 97 (282)
T ss_pred ----CcEEeecccccC
Confidence 346889999995
No 120
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=86.21 E-value=0.98 Score=48.43 Aligned_cols=67 Identities=21% Similarity=0.275 Sum_probs=41.1
Q ss_pred CCceeeeCCCCCHH----------------HHHHHHHHcCCCCCCeEEE-ecCccCCCCC--------------cHHHHH
Q 024080 47 CPVTVCGDIHGQFY----------------DLIELFRIGGNAPDTNYLF-MGDYVDRGYY--------------SVETVT 95 (272)
Q Consensus 47 ~~i~viGDIHG~~~----------------~l~~~l~~~~~~~~~~~vf-lGD~vDrG~~--------------s~evl~ 95 (272)
-+|+..+|+||++. .+..+++++.......+++ .||.+...|- ...+++
T Consensus 42 l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~i~ 121 (1163)
T PRK09419 42 IQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPMIK 121 (1163)
T ss_pred EEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCCcCHHHH
Confidence 37999999999863 3344555543222334544 9999986651 123455
Q ss_pred HHHHhhHhcCCcEEEEccCcchh
Q 024080 96 LLVALKVRYRDRITILRGNHESR 118 (272)
Q Consensus 96 ~l~~l~~~~p~~v~~lrGNHE~~ 118 (272)
.+-.+. --....||||.-
T Consensus 122 ~mN~lg-----yDa~~lGNHEFd 139 (1163)
T PRK09419 122 AMNALG-----YDAGTLGNHEFN 139 (1163)
T ss_pred HHhhcC-----ccEEeecccccc
Confidence 444442 235679999974
No 121
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=85.98 E-value=1.2 Score=44.84 Aligned_cols=69 Identities=19% Similarity=0.186 Sum_probs=43.7
Q ss_pred cCCCceeeeCCCCCHHH----------------HHHHHHHcCC-CCCCeEEEecCccCCCCCcH-------------HHH
Q 024080 45 VKCPVTVCGDIHGQFYD----------------LIELFRIGGN-APDTNYLFMGDYVDRGYYSV-------------ETV 94 (272)
Q Consensus 45 ~~~~i~viGDIHG~~~~----------------l~~~l~~~~~-~~~~~~vflGD~vDrG~~s~-------------evl 94 (272)
.+-+|+-..|+||++.. +..+++++.. .++.-+|-.||.+...|.+- .++
T Consensus 24 ~~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i 103 (649)
T PRK09420 24 VDLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVY 103 (649)
T ss_pred ceEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHH
Confidence 34588999999998642 3445555432 23344556999998665431 255
Q ss_pred HHHHHhhHhcCCcEEEEccCcchh
Q 024080 95 TLLVALKVRYRDRITILRGNHESR 118 (272)
Q Consensus 95 ~~l~~l~~~~p~~v~~lrGNHE~~ 118 (272)
+.+-.+. --....||||.-
T Consensus 104 ~amN~lg-----yDa~tlGNHEFd 122 (649)
T PRK09420 104 KAMNTLD-----YDVGNLGNHEFN 122 (649)
T ss_pred HHHHhcC-----CcEEeccchhhh
Confidence 6555552 346788999964
No 122
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=85.77 E-value=1.1 Score=44.67 Aligned_cols=66 Identities=18% Similarity=0.170 Sum_probs=41.0
Q ss_pred CceeeeCCCCCHHH----------------HHHHHHHcCC-CCCCeEEEecCccCCCCCc-------------HHHHHHH
Q 024080 48 PVTVCGDIHGQFYD----------------LIELFRIGGN-APDTNYLFMGDYVDRGYYS-------------VETVTLL 97 (272)
Q Consensus 48 ~i~viGDIHG~~~~----------------l~~~l~~~~~-~~~~~~vflGD~vDrG~~s-------------~evl~~l 97 (272)
+|+-..|+||++.. +..++++... .++.-+|-.||.+...|.+ ..+++.+
T Consensus 4 ~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~m 83 (626)
T TIGR01390 4 RIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKAM 83 (626)
T ss_pred EEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHHH
Confidence 67889999999643 3445555432 2334455699999865433 2345555
Q ss_pred HHhhHhcCCcEEEEccCcchh
Q 024080 98 VALKVRYRDRITILRGNHESR 118 (272)
Q Consensus 98 ~~l~~~~p~~v~~lrGNHE~~ 118 (272)
-.+. --....||||.-
T Consensus 84 N~lg-----yDa~tlGNHEFd 99 (626)
T TIGR01390 84 NLLK-----YDVGNLGNHEFN 99 (626)
T ss_pred hhcC-----ccEEeccccccc
Confidence 5552 235788999964
No 123
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=83.66 E-value=3.5 Score=37.07 Aligned_cols=73 Identities=14% Similarity=0.254 Sum_probs=47.6
Q ss_pred CCceeeeCCCC----CHHHHHHHHHHcC-CCC----CCeEEEecCccCCC----CCc----HHHHHHHHHh-hHhcC---
Q 024080 47 CPVTVCGDIHG----QFYDLIELFRIGG-NAP----DTNYLFMGDYVDRG----YYS----VETVTLLVAL-KVRYR--- 105 (272)
Q Consensus 47 ~~i~viGDIHG----~~~~l~~~l~~~~-~~~----~~~~vflGD~vDrG----~~s----~evl~~l~~l-~~~~p--- 105 (272)
.+++|+||+|= .+++|.++|+... ..+ ...+|+.|+++-+. ..+ .+-.+-+..+ ..++|
T Consensus 28 ~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~L~ 107 (291)
T PTZ00235 28 HNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKLIL 107 (291)
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChHHH
Confidence 46999999995 4566777777662 222 55689999998663 222 2334444432 33444
Q ss_pred --CcEEEEccCcchhh
Q 024080 106 --DRITILRGNHESRQ 119 (272)
Q Consensus 106 --~~v~~lrGNHE~~~ 119 (272)
.++++|+|-+|-+.
T Consensus 108 ~~s~fVFVPGpnDPw~ 123 (291)
T PTZ00235 108 EHCYLIFIPGINDPCA 123 (291)
T ss_pred hcCeEEEECCCCCCCc
Confidence 48999999999753
No 124
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=80.51 E-value=2.6 Score=43.45 Aligned_cols=67 Identities=19% Similarity=0.152 Sum_probs=41.5
Q ss_pred CCceeeeCCCCCHHH----------------HHHHHHHcCC-CCCCeEEEecCccCCCCCc--------------HHHHH
Q 024080 47 CPVTVCGDIHGQFYD----------------LIELFRIGGN-APDTNYLFMGDYVDRGYYS--------------VETVT 95 (272)
Q Consensus 47 ~~i~viGDIHG~~~~----------------l~~~l~~~~~-~~~~~~vflGD~vDrG~~s--------------~evl~ 95 (272)
-+|+-..|+||++.. +..+++++.. .++.-+|-.||.+..-|.+ ..+++
T Consensus 116 LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i~ 195 (814)
T PRK11907 116 VRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMYA 195 (814)
T ss_pred EEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHHH
Confidence 478899999999642 2334444432 2334455699999764432 13566
Q ss_pred HHHHhhHhcCCcEEEEccCcchh
Q 024080 96 LLVALKVRYRDRITILRGNHESR 118 (272)
Q Consensus 96 ~l~~l~~~~p~~v~~lrGNHE~~ 118 (272)
.+-.|. --....||||.-
T Consensus 196 amN~LG-----yDA~tLGNHEFD 213 (814)
T PRK11907 196 ALEALG-----FDAGTLGNHEFN 213 (814)
T ss_pred HHhccC-----CCEEEechhhcc
Confidence 655552 246788999964
No 125
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=80.22 E-value=7.1 Score=34.57 Aligned_cols=47 Identities=15% Similarity=0.289 Sum_probs=28.4
Q ss_pred CeEEEecCccCCCCC------------------cHHHHHHHHHhhHhcCC--cEEEEccCcchhhhh
Q 024080 75 TNYLFMGDYVDRGYY------------------SVETVTLLVALKVRYRD--RITILRGNHESRQIT 121 (272)
Q Consensus 75 ~~~vflGD~vDrG~~------------------s~evl~~l~~l~~~~p~--~v~~lrGNHE~~~~~ 121 (272)
.++|+.||.|+.-.. ..+-+..+-.+..+-+. .|.+++||||-....
T Consensus 44 ~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~l~~l~~~i~V~imPG~~Dp~~~~ 110 (257)
T cd07387 44 VRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAVKELDNFLSQLASSVPVDLMPGEFDPANHS 110 (257)
T ss_pred EEEEEECCcccccccccchhhhhhccccccchhhHHHHHHHHHHHHhhhcCCeEEECCCCCCccccc
Confidence 368899999996432 12223333333222232 588999999987543
No 126
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=79.38 E-value=3.6 Score=40.47 Aligned_cols=65 Identities=20% Similarity=0.125 Sum_probs=38.5
Q ss_pred ceeeeCCCCCHHH---------------------HHHHHHHcC-CCCCCeEEEecCccCCCCCc-----HHHHHHHHHhh
Q 024080 49 VTVCGDIHGQFYD---------------------LIELFRIGG-NAPDTNYLFMGDYVDRGYYS-----VETVTLLVALK 101 (272)
Q Consensus 49 i~viGDIHG~~~~---------------------l~~~l~~~~-~~~~~~~vflGD~vDrG~~s-----~evl~~l~~l~ 101 (272)
|+-+.|+||++.. +..++++.. ..++.-++..||.+...+.+ ...++++-.+.
T Consensus 3 ILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~g 82 (550)
T TIGR01530 3 IIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLYFTLFGGRADAALMNAAG 82 (550)
T ss_pred EEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccchhhcCCHHHHHHHhccC
Confidence 5567788877533 344555443 23344555799999765433 33455444442
Q ss_pred HhcCCcEEEEccCcchh
Q 024080 102 VRYRDRITILRGNHESR 118 (272)
Q Consensus 102 ~~~p~~v~~lrGNHE~~ 118 (272)
--....||||.-
T Consensus 83 -----~Da~~lGNHEFd 94 (550)
T TIGR01530 83 -----FDFFTLGNHEFD 94 (550)
T ss_pred -----CCEEEecccccc
Confidence 346889999964
No 127
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=78.55 E-value=2.7 Score=41.26 Aligned_cols=68 Identities=21% Similarity=0.118 Sum_probs=38.7
Q ss_pred CCCceeeeCCCCCHH----------HHHHHHHHcC-----CCCCCeEEEecCccCCCCCc-----HHHHHHHHHhhHhcC
Q 024080 46 KCPVTVCGDIHGQFY----------DLIELFRIGG-----NAPDTNYLFMGDYVDRGYYS-----VETVTLLVALKVRYR 105 (272)
Q Consensus 46 ~~~i~viGDIHG~~~----------~l~~~l~~~~-----~~~~~~~vflGD~vDrG~~s-----~evl~~l~~l~~~~p 105 (272)
+-.|+-+.|+||++. .+..++++.. ..++.-++..||.+...+.+ ..+++++-.+.
T Consensus 34 ~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~g---- 109 (551)
T PRK09558 34 KITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIG---- 109 (551)
T ss_pred EEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcCC----
Confidence 346889999999874 2234444332 12334455699998643322 23444454442
Q ss_pred CcEEEEccCcchh
Q 024080 106 DRITILRGNHESR 118 (272)
Q Consensus 106 ~~v~~lrGNHE~~ 118 (272)
-.+ ...||||.-
T Consensus 110 ~Da-~tlGNHEFD 121 (551)
T PRK09558 110 YDA-MAVGNHEFD 121 (551)
T ss_pred CCE-EcccccccC
Confidence 234 445999975
No 128
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=73.75 E-value=3.8 Score=36.59 Aligned_cols=68 Identities=25% Similarity=0.282 Sum_probs=42.6
Q ss_pred CCceeeeC--CCCCHHHHHHHHHH--cCC-CCCCeEEEecCcc-CCCCCcHH------HHHHHH---HhhHhcCCcEEEE
Q 024080 47 CPVTVCGD--IHGQFYDLIELFRI--GGN-APDTNYLFMGDYV-DRGYYSVE------TVTLLV---ALKVRYRDRITIL 111 (272)
Q Consensus 47 ~~i~viGD--IHG~~~~l~~~l~~--~~~-~~~~~~vflGD~v-DrG~~s~e------vl~~l~---~l~~~~p~~v~~l 111 (272)
-+++|||| .+|.+..-+..++. ++. .+.+-++-+||=+ |-|..+.- ..+-+. +|+. ..+.|
T Consensus 44 lsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSLQk----pWy~v 119 (336)
T KOG2679|consen 44 LSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSLQK----PWYSV 119 (336)
T ss_pred eEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhhhcccCccccc----chhhh
Confidence 37999999 48888877666554 332 3344566799944 67765422 222222 2322 46899
Q ss_pred ccCcchh
Q 024080 112 RGNHESR 118 (272)
Q Consensus 112 rGNHE~~ 118 (272)
.||||..
T Consensus 120 lGNHDyr 126 (336)
T KOG2679|consen 120 LGNHDYR 126 (336)
T ss_pred ccCcccc
Confidence 9999986
No 129
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=71.98 E-value=10 Score=27.33 Aligned_cols=68 Identities=15% Similarity=0.052 Sum_probs=46.4
Q ss_pred CCceeeeCCCCCHHHHHHHHHHcCC--CCCCeEEEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccC
Q 024080 47 CPVTVCGDIHGQFYDLIELFRIGGN--APDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGN 114 (272)
Q Consensus 47 ~~i~viGDIHG~~~~l~~~l~~~~~--~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGN 114 (272)
..+.||=|---|.+.+.++++.+.. +....++.+|+.-|+|..+.+....+.++...+.+.+++...|
T Consensus 12 ~~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~ 81 (91)
T PF02875_consen 12 NGPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDN 81 (91)
T ss_dssp TTEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSB
T ss_pred CCcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCC
Confidence 4567777877788889888887752 3455566899999989888887777777766666564444443
No 130
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=70.92 E-value=6 Score=40.64 Aligned_cols=68 Identities=21% Similarity=0.176 Sum_probs=40.7
Q ss_pred CCCceeeeCCCCCHHH----------------HHHHHHHcC-CCCCCeEEEecCccCCCCCc------------------
Q 024080 46 KCPVTVCGDIHGQFYD----------------LIELFRIGG-NAPDTNYLFMGDYVDRGYYS------------------ 90 (272)
Q Consensus 46 ~~~i~viGDIHG~~~~----------------l~~~l~~~~-~~~~~~~vflGD~vDrG~~s------------------ 90 (272)
.-+|+-..|+||++.. +..+++++. ..++.-+|-.||.+-.-|-+
T Consensus 39 ~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~~ 118 (780)
T PRK09418 39 NLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPSY 118 (780)
T ss_pred EEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchHHHHHhhccccccccccccc
Confidence 3479999999999632 334444443 22344455699988543321
Q ss_pred -HHHHHHHHHhhHhcCCcEEEEccCcchh
Q 024080 91 -VETVTLLVALKVRYRDRITILRGNHESR 118 (272)
Q Consensus 91 -~evl~~l~~l~~~~p~~v~~lrGNHE~~ 118 (272)
..+++.+-.+. --....||||.-
T Consensus 119 ~~p~i~~mN~lg-----yDa~tlGNHEFd 142 (780)
T PRK09418 119 THPLYRLMNLMK-----YDVISLGNHEFN 142 (780)
T ss_pred chHHHHHHhccC-----CCEEeccccccc
Confidence 23555555552 236789999953
No 131
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=70.54 E-value=15 Score=35.93 Aligned_cols=56 Identities=21% Similarity=0.200 Sum_probs=43.0
Q ss_pred CCCceeeeCCCC------------CHHHHHHHHHHcCCCCCCeEEEecCccCCCCCcHHHHHHHHHhh
Q 024080 46 KCPVTVCGDIHG------------QFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALK 101 (272)
Q Consensus 46 ~~~i~viGDIHG------------~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~ 101 (272)
..||.|-.|+|= .+.+|+.+|+.+.....|-++.-||++.-..-|..+|-.+..+.
T Consensus 13 tirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkPSr~~L~~~i~lL 80 (646)
T KOG2310|consen 13 TIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKPSRKTLHRCLELL 80 (646)
T ss_pred ceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCccHHHHHHHHHHH
Confidence 358899999994 45678899998877777888899999987777777665555443
No 132
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=68.79 E-value=71 Score=27.00 Aligned_cols=85 Identities=19% Similarity=0.243 Sum_probs=59.9
Q ss_pred CeEEEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccCcchhhhhhhhCChH----------------HHHHHhCChh
Q 024080 75 TNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYD----------------ECLRKYGNAN 138 (272)
Q Consensus 75 ~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~~~~~g~~~----------------e~~~~~~~~~ 138 (272)
..+|++| .|-..-|.++++..++..|..+- ++.|+-|.|-.+....|.. |....| -..
T Consensus 40 ~~lVvlG----SGGHT~EMlrLl~~l~~~y~~r~-yI~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~-ltS 113 (211)
T KOG3339|consen 40 STLVVLG----SGGHTGEMLRLLEALQDLYSPRS-YIAADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSW-LTS 113 (211)
T ss_pred eEEEEEc----CCCcHHHHHHHHHHHHhhcCceE-EEEecCchhhHHHHHhhhccccccchhheecchhhhhhhhh-hhh
Confidence 4578887 48889999999999998887664 4589999998776544321 111112 134
Q ss_pred HHHHHHHHhhccCceEEEcCcEEEecC
Q 024080 139 VWKYFTDLFDYLPLTALIESQIFCLHG 165 (272)
Q Consensus 139 ~~~~~~~~~~~lPl~~~~~~~~l~vHa 165 (272)
.+..+...+-++++...+..+++.+-|
T Consensus 114 v~Tti~all~s~~lv~RirPdlil~NG 140 (211)
T KOG3339|consen 114 VFTTIWALLQSFVLVWRIRPDLILCNG 140 (211)
T ss_pred HHHHHHHHHHHheEEEecCCCEEEECC
Confidence 566777778888888777667777766
No 133
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=60.47 E-value=12 Score=33.41 Aligned_cols=64 Identities=20% Similarity=0.299 Sum_probs=41.5
Q ss_pred CCceeeeCCCCCHHHHHHHHHHcCCCCCCeEEEecCccCCCCCcHHHHHH---HHHhhHhcCCcEEEEccCcchhhh
Q 024080 47 CPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTL---LVALKVRYRDRITILRGNHESRQI 120 (272)
Q Consensus 47 ~~i~viGDIHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~---l~~l~~~~p~~v~~lrGNHE~~~~ 120 (272)
.+.+.|+|-|+...... ..++.|-++-+||.-.-|. +-||..+ +-+|.-+ .=+.|+||||...-
T Consensus 62 ~r~VcisdtH~~~~~i~------~~p~gDvlihagdfT~~g~-~~ev~~fn~~~gslph~---yKIVIaGNHELtFd 128 (305)
T KOG3947|consen 62 ARFVCISDTHELTFDIN------DIPDGDVLIHAGDFTNLGL-PEEVIKFNEWLGSLPHE---YKIVIAGNHELTFD 128 (305)
T ss_pred eEEEEecCcccccCccc------cCCCCceEEeccCCccccC-HHHHHhhhHHhccCcce---eeEEEeeccceeec
Confidence 47999999997654432 2455666788999976553 3445443 3344222 34789999998753
No 134
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=60.41 E-value=54 Score=26.75 Aligned_cols=58 Identities=21% Similarity=0.363 Sum_probs=41.1
Q ss_pred eeeeCCCCCHHHHHHHH-HHcCC------------CCCCeEEEecCccCCCCCcHHHHHHHHHhhHhcCCcEEE
Q 024080 50 TVCGDIHGQFYDLIELF-RIGGN------------APDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITI 110 (272)
Q Consensus 50 ~viGDIHG~~~~l~~~l-~~~~~------------~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~ 110 (272)
++.+=.+||-..+-..+ +.++. .+..++||+|=-+|+|.-+.++.++|..|+ +.+|.+
T Consensus 2 IvYsS~TGNTkkvA~aI~~~l~~~~~~~~~~~~~~~~~yD~i~lG~w~d~G~~d~~~~~fl~~l~---~KkV~l 72 (160)
T PF12641_consen 2 IVYSSRTGNTKKVAEAIAEALGAKDIVSVEEPPEDLEDYDLIFLGFWIDKGTPDKDMKEFLKKLK---GKKVAL 72 (160)
T ss_pred EEEECCCChHHHHHHHHHHHCCCceeEeccccccCCCCCCEEEEEcCccCCCCCHHHHHHHHHcc---CCeEEE
Confidence 45556677777775443 33332 244679999999999999999999999885 345544
No 135
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=57.66 E-value=9.6 Score=37.81 Aligned_cols=40 Identities=20% Similarity=0.126 Sum_probs=31.9
Q ss_pred CHHHHHHHHHHcCCc----EEEEcCCCCc--cCee-EeCCCeEEEEe
Q 024080 218 GQDIASQFNHTNGLS----LISRAHQLVM--EGYN-WCQVWNLKDHA 257 (272)
Q Consensus 218 g~~~~~~fl~~~~~~----~iirgH~~~~--~G~~-~~~~~~li~i~ 257 (272)
.++....+|+..|++ .||-||+||. .|=. ..++||++.|+
T Consensus 507 ~e~~c~~IL~EFgl~~~~~hIINGHvPVk~k~GEsPIKa~Gkl~VID 553 (640)
T PF06874_consen 507 DEEICDKILEEFGLDPERGHIINGHVPVKVKKGESPIKANGKLIVID 553 (640)
T ss_pred CHHHHHHHHHHhCCCCCCCeEECCccccccCCCCCCccCCCEEEEEc
Confidence 566777899999998 9999999997 5553 35688988873
No 136
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=52.87 E-value=35 Score=33.72 Aligned_cols=62 Identities=19% Similarity=0.161 Sum_probs=39.3
Q ss_pred HHHHHHHHcCCCC--CCeEEEecCcc--CCCCCcHH----HHHHHHHh-hHhcCC-cEEEEccCcchhhhhh
Q 024080 61 DLIELFRIGGNAP--DTNYLFMGDYV--DRGYYSVE----TVTLLVAL-KVRYRD-RITILRGNHESRQITQ 122 (272)
Q Consensus 61 ~l~~~l~~~~~~~--~~~~vflGD~v--DrG~~s~e----vl~~l~~l-~~~~p~-~v~~lrGNHE~~~~~~ 122 (272)
.+..+|+.++... -|-++-.||++ |+++.+.+ ++..+.++ ..-+|+ .|+...||||..-.+.
T Consensus 196 lies~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~ 267 (577)
T KOG3770|consen 196 LIESALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNL 267 (577)
T ss_pred HHHHHHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhh
Confidence 4556777765433 34456799999 56666544 33333333 233665 5899999999987664
No 137
>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed
Probab=52.08 E-value=64 Score=30.74 Aligned_cols=67 Identities=12% Similarity=0.058 Sum_probs=48.8
Q ss_pred CCCceeeeCCCC-CHHHHHHHHHHcCCCCCCeEEEecCccCCCCCcHHHHHHHHHhhHhc-CCcEEEEcc
Q 024080 46 KCPVTVCGDIHG-QFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRY-RDRITILRG 113 (272)
Q Consensus 46 ~~~i~viGDIHG-~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~-p~~v~~lrG 113 (272)
...+.||=|-++ +.+.+.+.|+.+...+..+++.+||+...|+.+.+.-.-+.+..... .+.++ +-|
T Consensus 324 ~~g~~iIDDsYn~nP~s~~aaL~~l~~~~~r~i~VlG~m~elG~~~~~~h~~~~~~~~~~~~d~v~-~~G 392 (453)
T PRK10773 324 AEGQLLLDDSYNANVGSMTAAAQVLAEMPGYRVMVVGDMAELGAESEACHRQVGEAAKAAGIDKVL-SVG 392 (453)
T ss_pred CCCeEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEECChhhcchHHHHHHHHHHHHHHHcCCCEEE-EEC
Confidence 345788989555 68888888887764445678899999999999999887776655443 34444 446
No 138
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=51.38 E-value=56 Score=28.67 Aligned_cols=87 Identities=24% Similarity=0.309 Sum_probs=46.1
Q ss_pred CeEEEecCcc-CCCCC---cHHHHHHHHHhhHh-------cCCcEEEEccCcchhhhhhhhCChHHHHH--HhCChhHHH
Q 024080 75 TNYLFMGDYV-DRGYY---SVETVTLLVALKVR-------YRDRITILRGNHESRQITQVYGFYDECLR--KYGNANVWK 141 (272)
Q Consensus 75 ~~~vflGD~v-DrG~~---s~evl~~l~~l~~~-------~p~~v~~lrGNHE~~~~~~~~g~~~e~~~--~~~~~~~~~ 141 (272)
.-.+||||-. ||-.. ..-++.+|.++... -..+|++|-||||.-.-. . +..... +...++
T Consensus 86 tpciflgdhtgdrfsti~gd~yiltllnsm~nme~nkdsrinknvvvlagnhein~ng-n---y~arlanhkls~gD--- 158 (318)
T PF13258_consen 86 TPCIFLGDHTGDRFSTIFGDQYILTLLNSMRNMEGNKDSRINKNVVVLAGNHEINFNG-N---YMARLANHKLSAGD--- 158 (318)
T ss_pred ccceeecCcccchhhhhcchHHHHHHHHHHHhcccccccccccceEEEecCceeccCc-h---HHHHHhhCCCCccc---
Confidence 3468888865 34221 12345555555431 234899999999986421 1 111111 111122
Q ss_pred HHHHHhhccCceEEEc-CcEEEecCCCCC
Q 024080 142 YFTDLFDYLPLTALIE-SQIFCLHGGLSP 169 (272)
Q Consensus 142 ~~~~~~~~lPl~~~~~-~~~l~vHaGi~p 169 (272)
--..++.+|++-... .+++-.|-||-.
T Consensus 159 -TYnlIKtldVC~YD~erkvltsHHGIir 186 (318)
T PF13258_consen 159 -TYNLIKTLDVCNYDPERKVLTSHHGIIR 186 (318)
T ss_pred -hhhccccccccccCcchhhhhcccCcee
Confidence 224566777654322 378888888854
No 139
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=46.26 E-value=17 Score=32.43 Aligned_cols=39 Identities=28% Similarity=0.497 Sum_probs=26.2
Q ss_pred eEEEecCccCCCCCcHH-HHHHHHHhhHhcCCcEEEEccCcchh
Q 024080 76 NYLFMGDYVDRGYYSVE-TVTLLVALKVRYRDRITILRGNHESR 118 (272)
Q Consensus 76 ~~vflGD~vDrG~~s~e-vl~~l~~l~~~~p~~v~~lrGNHE~~ 118 (272)
+++|+||+|.+ ...+ +-..|-+++.+++..+++ .|=|..
T Consensus 2 ~ilfiGDi~G~--~Gr~~l~~~L~~lk~~~~~D~vI--aNgEn~ 41 (266)
T TIGR00282 2 KFLFIGDVYGK--AGRKIVKNNLPQLKSKYQADLVI--ANGENT 41 (266)
T ss_pred eEEEEEecCCH--HHHHHHHHHHHHHHHhCCCCEEE--EcCccc
Confidence 68999999954 3333 346677888888755444 466665
No 140
>PF12085 DUF3562: Protein of unknown function (DUF3562); InterPro: IPR021945 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 62 to 84 amino acids in length. This protein has two completely conserved residues (A and Y) that may be functionally important.
Probab=44.29 E-value=54 Score=22.70 Aligned_cols=42 Identities=19% Similarity=0.258 Sum_probs=37.3
Q ss_pred CCcchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhccCcce
Q 024080 2 PSHGDLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQ 43 (272)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~e~~~~ 43 (272)
|++.+.+++|+.+-.....|.+.+..++++...-++.+-.|.
T Consensus 1 M~~~~~~e~i~~iA~~t~~P~e~V~~my~dt~~~l~~~ARV~ 42 (66)
T PF12085_consen 1 MAQDNVDEVIRSIAEETGTPAETVRRMYDDTMRELSSGARVH 42 (66)
T ss_pred CCcccHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHcCCchh
Confidence 568889999999998888999999999999999999887764
No 141
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=43.68 E-value=23 Score=31.32 Aligned_cols=40 Identities=30% Similarity=0.363 Sum_probs=27.4
Q ss_pred eEEEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccCcchh
Q 024080 76 NYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESR 118 (272)
Q Consensus 76 ~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 118 (272)
+++|+||+|.+.- -..+-..|.+++.+++..+++. |=|..
T Consensus 1 ~ilfigdi~g~~G-~~~~~~~l~~lk~~~~~D~vi~--NgEn~ 40 (255)
T cd07382 1 KILFIGDIVGKPG-RKAVKEHLPKLKKEYKIDFVIA--NGENA 40 (255)
T ss_pred CEEEEEeCCCHHH-HHHHHHHHHHHHHHCCCCEEEE--CCccc
Confidence 4789999998632 2356677888888887665554 55554
No 142
>COG2204 AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]
Probab=40.48 E-value=97 Score=29.96 Aligned_cols=83 Identities=22% Similarity=0.348 Sum_probs=57.1
Q ss_pred CCCcchHHHHHHHHhcC------CCCCHHHHHHHHHHHHHHHhccCcce-ecCCCceeeeCCCCCHHHHHHHHHHcCC--
Q 024080 1 MPSHGDLDRQIEHLMEC------KPLPEAEVKTLCDQARAILVEEWNVQ-PVKCPVTVCGDIHGQFYDLIELFRIGGN-- 71 (272)
Q Consensus 1 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~~~~~l~~e~~~~-~~~~~i~viGDIHG~~~~l~~~l~~~~~-- 71 (272)
||.+++++..++.++.+ ++++.+.+..+++.|.+.-+.....- .....-.--.++=|.-.++..+.+.++.
T Consensus 82 ~Tg~g~i~~AV~A~k~GA~Dfl~KP~~~~~L~~~v~ral~~~~~~~e~~~~~~~~~~~~~~liG~S~am~~l~~~i~kvA 161 (464)
T COG2204 82 MTGHGDIDTAVEALRLGAFDFLEKPFDLDRLLAIVERALELRELQRENRRSLKRAKSLGGELVGESPAMQQLRRLIAKVA 161 (464)
T ss_pred EeCCCCHHHHHHHHhcCcceeeeCCCCHHHHHHHHHHHHHHhhhhhhhhhhhhccccccCCceecCHHHHHHHHHHHHHh
Confidence 78999999999999877 57999999999999988744322211 1222223445666787888777776642
Q ss_pred CCCCeEEEecCc
Q 024080 72 APDTNYLFMGDY 83 (272)
Q Consensus 72 ~~~~~~vflGD~ 83 (272)
..+..+++.|.-
T Consensus 162 ~s~a~VLI~GES 173 (464)
T COG2204 162 PSDASVLITGES 173 (464)
T ss_pred CCCCCEEEECCC
Confidence 344567788864
No 143
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=36.94 E-value=55 Score=28.88 Aligned_cols=67 Identities=16% Similarity=0.113 Sum_probs=29.9
Q ss_pred CCceeeeCCCCCHH--HHHHHHHHcCCC-CCCeEEEecCccCCCCC-cHHHHHHHHHhhHhcCCcEEEEccCcchh
Q 024080 47 CPVTVCGDIHGQFY--DLIELFRIGGNA-PDTNYLFMGDYVDRGYY-SVETVTLLVALKVRYRDRITILRGNHESR 118 (272)
Q Consensus 47 ~~i~viGDIHG~~~--~l~~~l~~~~~~-~~~~~vflGD~vDrG~~-s~evl~~l~~l~~~~p~~v~~lrGNHE~~ 118 (272)
||+.++||+-|... .+..-|..+... ..+-+|.-|.-...|.. +.+....+.+. . --++=+|||-..
T Consensus 1 mriLfiGDvvGk~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENaa~G~Git~k~y~~l~~~----G-~dviT~GNH~wd 71 (266)
T COG1692 1 MRILFIGDVVGKPGRKAVKEHLPQLKSKYKIDFVIVNGENAAGGFGITEKIYKELLEA----G-ADVITLGNHTWD 71 (266)
T ss_pred CeEEEEecccCcchHHHHHHHhHHHHHhhcCcEEEEcCccccCCcCCCHHHHHHHHHh----C-CCEEeccccccc
Confidence 46667777766533 233333333211 12333344544443332 33444444443 1 224556777554
No 144
>KOG3425 consensus Uncharacterized conserved protein [Function unknown]
Probab=35.97 E-value=1.6e+02 Score=23.08 Aligned_cols=60 Identities=17% Similarity=0.153 Sum_probs=38.8
Q ss_pred HHHHHHHHHHcCCCCCCeEEEecCccCCCCCc-----HHHHHHHHHhhHhcCCcEEEE---ccCcchh
Q 024080 59 FYDLIELFRIGGNAPDTNYLFMGDYVDRGYYS-----VETVTLLVALKVRYRDRITIL---RGNHESR 118 (272)
Q Consensus 59 ~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s-----~evl~~l~~l~~~~p~~v~~l---rGNHE~~ 118 (272)
++.|+..++.......--++|+|+-.|++-+| +...-.+..-...+|..+++| -||-+.+
T Consensus 12 ~e~~~~~~~~~~n~~~ifvlF~gskd~~tGqSWCPdCV~AEPvi~~alk~ap~~~~~v~v~VG~rp~W 79 (128)
T KOG3425|consen 12 YESFEETLKNVENGKTIFVLFLGSKDDTTGQSWCPDCVAAEPVINEALKHAPEDVHFVHVYVGNRPYW 79 (128)
T ss_pred HHHHHHHHHHHhCCceEEEEEecccCCCCCCcCCchHHHhhHHHHHHHHhCCCceEEEEEEecCCCcc
Confidence 57788888887655554456999999987554 444444443333567766554 5777765
No 145
>PLN02965 Probable pheophorbidase
Probab=33.16 E-value=2.1e+02 Score=24.29 Aligned_cols=21 Identities=10% Similarity=-0.059 Sum_probs=16.2
Q ss_pred HHHHHHHHHcCC--cEEEEcCCC
Q 024080 220 DIASQFNHTNGL--SLISRAHQL 240 (272)
Q Consensus 220 ~~~~~fl~~~~~--~~iirgH~~ 240 (272)
+.+.++++..+. +.++.||+.
T Consensus 59 ~dl~~~l~~l~~~~~~~lvGhSm 81 (255)
T PLN02965 59 RPLFALLSDLPPDHKVILVGHSI 81 (255)
T ss_pred HHHHHHHHhcCCCCCEEEEecCc
Confidence 446778888764 799999974
No 146
>TIGR01143 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase. This family consists of the strictly bacterial MurF gene of peptidoglycan biosynthesis. This enzyme is almost always UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase, but in a few species, MurE adds lysine rather than diaminopimelate. This enzyme acts on the product from MurE activity, and so is also subfamily rather than equivalog. Staphylococcus aureus is an example of species in this MurF protein would differ.
Probab=33.06 E-value=2.2e+02 Score=26.60 Aligned_cols=71 Identities=18% Similarity=0.173 Sum_probs=47.8
Q ss_pred CCCceeeeCCC-CCHHHHHHHHHHcCCCCCCeEEEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccCcc
Q 024080 46 KCPVTVCGDIH-GQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHE 116 (272)
Q Consensus 46 ~~~i~viGDIH-G~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE 116 (272)
...+.+|=|-+ .+.+.+.++|+.+...+...++.+|+.-.-|+.+.+.-..+.+....+.-..+++-|.+.
T Consensus 295 ~~~~~vidDsya~np~s~~~al~~l~~~~~r~i~VlG~~~e~G~~~~~~~~~l~~~~~~~~~d~vi~~g~~~ 366 (417)
T TIGR01143 295 KNGLTLIDDTYNANPDSMRAALDALARFPGKKILVLGDMAELGEYSEELHAEVGRYANSLGIDLVFLVGEEA 366 (417)
T ss_pred CCCcEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEEcCchhcChHHHHHHHHHHHHHHHcCCCEEEEECHHH
Confidence 34578888855 488999999988764334567789999888888877666655554444323444456443
No 147
>COG4320 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=32.85 E-value=25 Score=32.18 Aligned_cols=58 Identities=29% Similarity=0.413 Sum_probs=37.8
Q ss_pred HhccCcceecCCCceeeeCCC-CCHHHHHHHHHHcCCCCCCeEEE-ecCccCC---CCCcHHHHHHHHHhhH
Q 024080 36 LVEEWNVQPVKCPVTVCGDIH-GQFYDLIELFRIGGNAPDTNYLF-MGDYVDR---GYYSVETVTLLVALKV 102 (272)
Q Consensus 36 l~~e~~~~~~~~~i~viGDIH-G~~~~l~~~l~~~~~~~~~~~vf-lGD~vDr---G~~s~evl~~l~~l~~ 102 (272)
++.-|-.++-.+.+.++||.| |||.++.. .+..++| .-|+ |- |+....++.+..+|..
T Consensus 46 ~~~~p~~lp~~p~tw~cGD~HLgN~ga~~~--------~~G~V~f~i~DF-De~~~g~~~~DlvRl~~Sl~~ 108 (410)
T COG4320 46 MKTWPWSLPKTPFTWLCGDAHLGNFGAARN--------SKGNVVFKIADF-DEGHLGQYIWDLVRLAVSLVL 108 (410)
T ss_pred HhcCccccCCCCceEEecccccccchhhcc--------CCCceEEEeccc-chhhccchHHHHHHHHHHHHH
Confidence 444565677778899999999 77777641 1223444 6665 33 6677777777777754
No 148
>PRK11929 putative bifunctional UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase/UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase; Provisional
Probab=32.37 E-value=2.3e+02 Score=29.82 Aligned_cols=72 Identities=13% Similarity=0.124 Sum_probs=48.1
Q ss_pred CCCceeeeCCC-CCHHHHHHHHHHcCCCC-CCeEEEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccCcch
Q 024080 46 KCPVTVCGDIH-GQFYDLIELFRIGGNAP-DTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHES 117 (272)
Q Consensus 46 ~~~i~viGDIH-G~~~~l~~~l~~~~~~~-~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~ 117 (272)
...+.+|=|-+ -+.+.+.++|+.+...+ ..+++.+|++-+.|+.+.+.-..+...........+++-|..-.
T Consensus 833 ~~~~~iidDsya~np~s~~aaL~~l~~~~~~~~i~VlG~~~e~g~~~~~~h~~~g~~~~~~~~~~vi~~Ge~~~ 906 (958)
T PRK11929 833 SCGTRIIDDTYNANPDSMRAAIDVLAELPNGPRALVLGDMLELGDNGPAMHREVGKYARQLGIDALITLGEAAR 906 (958)
T ss_pred CCCcEEEEcCCCCCHHHHHHHHHHHHhccCCCEEEEECCchhcCcHHHHHHHHHHHHHHHcCCCEEEEECcCHH
Confidence 34678888966 47888999888876433 45678899999989988776555544433323345555575543
No 149
>PF06490 FleQ: Flagellar regulatory protein FleQ; InterPro: IPR010518 This domain is found at the N terminus of a subset of sigma54-dependent transcriptional activators that are involved in regulation of flagellar motility e.g. FleQ in Pseudomonas aeruginosa. It is clearly related to IPR001789 from INTERPRO, but lacks the conserved aspartate residue that undergoes phosphorylation in the classic two-component system response regulator (IPR001789 from INTERPRO).
Probab=32.16 E-value=97 Score=23.34 Aligned_cols=64 Identities=19% Similarity=0.195 Sum_probs=41.5
Q ss_pred CceeeeCCCCCHHHHHHHHHHcCCCC-----------------CCeEEEecCccCCCCCcHHHHHHHHHhhHhcCCcEEE
Q 024080 48 PVTVCGDIHGQFYDLIELFRIGGNAP-----------------DTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITI 110 (272)
Q Consensus 48 ~i~viGDIHG~~~~l~~~l~~~~~~~-----------------~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~ 110 (272)
||.||.|=-.+...|..+|+-+|... ...+|.+|+.- .....+..+...+|.-=++
T Consensus 1 kILvIddd~~R~~~L~~ILeFlGe~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~-------~~~~~l~~l~~~~~~~Pvl 73 (109)
T PF06490_consen 1 KILVIDDDAERRQRLSTILEFLGEQCEAVSSSDWSQADWSSPWEACAVILGSCS-------KLAELLKELLKWAPHIPVL 73 (109)
T ss_pred CEEEECCcHHHHHhhhhhhhhcCCCeEEecHHHHHHhhhhcCCcEEEEEecCch-------hHHHHHHHHHhhCCCCCEE
Confidence 45666666666667777777666421 12244566553 5566666777777776688
Q ss_pred EccCcchh
Q 024080 111 LRGNHESR 118 (272)
Q Consensus 111 lrGNHE~~ 118 (272)
+.|.++..
T Consensus 74 llg~~~~~ 81 (109)
T PF06490_consen 74 LLGEHDSP 81 (109)
T ss_pred EECCCCcc
Confidence 88998887
No 150
>TIGR01143 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase. This family consists of the strictly bacterial MurF gene of peptidoglycan biosynthesis. This enzyme is almost always UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase, but in a few species, MurE adds lysine rather than diaminopimelate. This enzyme acts on the product from MurE activity, and so is also subfamily rather than equivalog. Staphylococcus aureus is an example of species in this MurF protein would differ.
Probab=32.13 E-value=1.9e+02 Score=27.15 Aligned_cols=68 Identities=15% Similarity=0.208 Sum_probs=40.6
Q ss_pred CCceeeeCCC--CCHHH-----HHHHHHHcCCCCCCeEEEecCcc----C---C-C---CCcHHHHHHHHHhhHhcCCcE
Q 024080 47 CPVTVCGDIH--GQFYD-----LIELFRIGGNAPDTNYLFMGDYV----D---R-G---YYSVETVTLLVALKVRYRDRI 108 (272)
Q Consensus 47 ~~i~viGDIH--G~~~~-----l~~~l~~~~~~~~~~~vflGD~v----D---r-G---~~s~evl~~l~~l~~~~p~~v 108 (272)
.+++|+|+.- |+++. +-+.+.. ...+.+++.||-- + . . ++..++++.+... ..|+.+
T Consensus 325 r~i~VlG~~~e~G~~~~~~~~~l~~~~~~---~~~d~vi~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~d~ 399 (417)
T TIGR01143 325 KKILVLGDMAELGEYSEELHAEVGRYANS---LGIDLVFLVGEEAAVIYDSLGCKGFHFADKDELLAFLKLE--LGEGDV 399 (417)
T ss_pred CEEEEEcCchhcChHHHHHHHHHHHHHHH---cCCCEEEEECHHHHHHHHhcccCcEEECCHHHHHHHHHHh--cCCCCE
Confidence 5689999995 77776 3333332 2347788899832 1 1 1 1233344544432 346778
Q ss_pred EEEccCcchhh
Q 024080 109 TILRGNHESRQ 119 (272)
Q Consensus 109 ~~lrGNHE~~~ 119 (272)
+++.|.+-..+
T Consensus 400 VLlkGSr~~~l 410 (417)
T TIGR01143 400 VLVKGSRSVKL 410 (417)
T ss_pred EEEEeCCcCcH
Confidence 99999887654
No 151
>KOG0966 consensus ATP-dependent DNA ligase IV [Replication, recombination and repair]
Probab=32.05 E-value=27 Score=35.69 Aligned_cols=86 Identities=21% Similarity=0.246 Sum_probs=67.5
Q ss_pred CCHHHHHHHHHHHHHHHhccCcceecCCCceeeeCCCCCHHHHH-HHHHHcCCCCCCeEEEecCccCCCCCcHHHHHHHH
Q 024080 20 LPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLI-ELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLV 98 (272)
Q Consensus 20 ~~~~~~~~l~~~~~~~l~~e~~~~~~~~~i~viGDIHG~~~~l~-~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~ 98 (272)
-..+++.+.+++|.+. ..|..++.-....|..|+=-|..-.+. ..++ |+..+-+++.+|-|-+||..+-.+..++.
T Consensus 394 ~~~edi~~~f~~ai~~-~~EGIVlK~~~S~Y~pg~R~~gW~K~KPeYlk--g~g~dLD~lIiGgy~G~g~rgg~~~~fl~ 470 (881)
T KOG0966|consen 394 STKEDIEQFFEEAIDN-GEEGIVLKKPDSSYVPGQRSNGWIKLKPEYLK--GFGEDLDLLIIGGYYGRGDRGGKVLSFLC 470 (881)
T ss_pred ccHHHHHHHHHHHHhc-CCCceEEeccCcccCccccCCCcEeecHHHHh--hcCccccEEEEecccCCCCCCCeeeeeee
Confidence 4688899999988876 558888888888999999877766665 3334 34455668888888899999999999999
Q ss_pred HhhHhcCCcE
Q 024080 99 ALKVRYRDRI 108 (272)
Q Consensus 99 ~l~~~~p~~v 108 (272)
++...+|.+.
T Consensus 471 a~~ek~~p~~ 480 (881)
T KOG0966|consen 471 ALAEKAPPNS 480 (881)
T ss_pred hhcccCCCCC
Confidence 9988877644
No 152
>PF06861 BALF1: BALF1 protein; InterPro: IPR010677 Epstein-Barr virus (strain GD1) (HHV-4), a human tumour DNA virus and a prominent member of gamma-herpesviruses, encodes homologues of cellular antiapoptotic viral Bcl-2 proteins BALF1 and BHRF1. They protect the virus from apoptosis in its host cell during virus synthesis [, ]. The virus infects B lymphocytes to establish a latent infection and yield proliferating, growth-transformed B cells in vitro. Bcl-2 genes are essential for the initial evasion of apoptosis which allows it to establish a latent infection or cause cellular transformation, or both []. Bcl-2 family proteins can inhibit or induce programmed cell death in part by counteracting the activity of other BCL-2 family members. BALF1, inhibits the antiapoptotic activity of EBV BHRF1 and of KSBcl-2 in several transfected cell lines. BALF1 fails, however, to inhibit the cellular BCL-2 family member, BCL-x(L). Thus, BALF1 acts as a negative regulator of the survival function of BHRF1, similar to the counterbalance observed between cellular BCL-2 family members [].
Probab=31.62 E-value=66 Score=26.65 Aligned_cols=81 Identities=20% Similarity=0.166 Sum_probs=54.1
Q ss_pred CHHHHHHHHHHHHHHHhccCcceecCCCceeeeCCCCCHHHHHHHHHHcCCCCCCeEEEecCccCCCCCcHHHHHHHHHh
Q 024080 21 PEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVAL 100 (272)
Q Consensus 21 ~~~~~~~l~~~~~~~l~~e~~~~~~~~~i~viGDIHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l 100 (272)
++.-+..|+.+.++. .....+++-+.....||-|+....+..+++..- +-|.++.+=+.-..++
T Consensus 54 ~E~lL~~LVk~~iKk--~~~~~~elv~~~~~~~~~h~~iq~l~~iir~~Y--------------~D~~D~~~rL~~tLa~ 117 (182)
T PF06861_consen 54 EEALLCWLVKQSIKK--NFKQLAELVCQPSHNADKHAHIQWLMSIIRAVY--------------RDHYDSWSRLCATLAY 117 (182)
T ss_pred HHHHHHHHHHHHHHH--HHHHHHHHHhccCCCCchhHHHHHHHHHHHHHH--------------hchhhHHHHHHHHHHH
Confidence 344455666666554 233455566677999999999999999998763 2366676666655555
Q ss_pred hHhcCCcEEEEccCcchhh
Q 024080 101 KVRYRDRITILRGNHESRQ 119 (272)
Q Consensus 101 ~~~~p~~v~~lrGNHE~~~ 119 (272)
...| -++.+.+.||...
T Consensus 118 a~~y--~~~~l~~d~e~~s 134 (182)
T PF06861_consen 118 ASMY--AMRNLLNDHENAS 134 (182)
T ss_pred HHHH--HHHHhcCchHHHH
Confidence 5544 3456778888764
No 153
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=30.61 E-value=3e+02 Score=22.39 Aligned_cols=67 Identities=12% Similarity=0.045 Sum_probs=42.0
Q ss_pred CCceeeeCCCCCHHHHHHHHHHcCCCCCCeEEEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccCcc
Q 024080 47 CPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHE 116 (272)
Q Consensus 47 ~~i~viGDIHG~~~~l~~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE 116 (272)
-+++|++. |....+...++..+....-..++..|-+..+.-..+++..+.+.....|+++.+ -|.+.
T Consensus 109 ~~~~i~Sn--~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~~-vgD~~ 175 (198)
T TIGR01428 109 YRLAILSN--GSPAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVLF-VASNP 175 (198)
T ss_pred CeEEEEeC--CCHHHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEEE-EeCCH
Confidence 46888887 566677788888886544455666666666555566666665443334656544 45544
No 154
>PRK14093 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase; Provisional
Probab=27.82 E-value=2.2e+02 Score=27.27 Aligned_cols=66 Identities=15% Similarity=0.108 Sum_probs=46.9
Q ss_pred CCceeeeC-CCCCHHHHHHHHHHcCCC----CCCeEEEecCccCCCCCcHHHHHHHHHhhHh-cCCcEEEEcc
Q 024080 47 CPVTVCGD-IHGQFYDLIELFRIGGNA----PDTNYLFMGDYVDRGYYSVETVTLLVALKVR-YRDRITILRG 113 (272)
Q Consensus 47 ~~i~viGD-IHG~~~~l~~~l~~~~~~----~~~~~vflGD~vDrG~~s~evl~~l~~l~~~-~p~~v~~lrG 113 (272)
..+++|=| --.+.+.+.+.|+.+... +...++.+||+..+|+.+.+....+...... ..+.++++ |
T Consensus 337 ~~~~iIDDsYahnP~s~~aaL~~l~~~~~~~~~r~i~V~G~m~elg~~~~~~h~~~~~~~~~~~~d~v~~~-G 408 (479)
T PRK14093 337 GEATLIDESYNANPASMAAALGVLGRAPVGPQGRRIAVLGDMLELGPRGPELHRGLAEAIRANAIDLVFCC-G 408 (479)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHhhhccCCCCEEEEECChHHcCcHHHHHHHHHHHHHHHcCCCEEEEE-c
Confidence 45788888 455889999999887643 3456778999999999998877666655432 34455444 6
No 155
>PRK12359 flavodoxin FldB; Provisional
Probab=27.27 E-value=70 Score=26.43 Aligned_cols=55 Identities=16% Similarity=0.219 Sum_probs=30.3
Q ss_pred CCCceeeeCCCCCHHHHHHHHHHcCCCCCCeEEE-ecCccCCCCCcHHHHHHHHHh
Q 024080 46 KCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLF-MGDYVDRGYYSVETVTLLVAL 100 (272)
Q Consensus 46 ~~~i~viGDIHG~~~~l~~~l~~~~~~~~~~~vf-lGD~vDrG~~s~evl~~l~~l 100 (272)
..+++-.|++--++..+..-|....+.+..-.+| +||-...++.=...+..+...
T Consensus 52 G~pTw~~Gel~~d~~~~~~~l~~~dl~gK~vAlFG~Gd~~~y~~~f~~a~~~l~~~ 107 (172)
T PRK12359 52 GIPTWDFGEIQEDWEAVWDQLDDLNLEGKIVALYGMGDQLGYGEWFLDALGMLHDK 107 (172)
T ss_pred EecccCCCcCcHHHHHHHHHHhhCCCCCCEEEEEeCCCCccchHHHHHHHHHHHHH
Confidence 3455555666555555555556555555555566 788655555434444444433
No 156
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=25.83 E-value=2.5e+02 Score=20.95 Aligned_cols=42 Identities=24% Similarity=0.446 Sum_probs=28.1
Q ss_pred HHHHHcCCCCCCeEEEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEE
Q 024080 64 ELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITIL 111 (272)
Q Consensus 64 ~~l~~~~~~~~~~~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~l 111 (272)
.+-+.+..-+..++|++||= |..-.|++..+. .++|++|..+
T Consensus 54 ~i~~i~~~fP~~kfiLIGDs---gq~DpeiY~~ia---~~~P~~i~ai 95 (100)
T PF09949_consen 54 NIERILRDFPERKFILIGDS---GQHDPEIYAEIA---RRFPGRILAI 95 (100)
T ss_pred HHHHHHHHCCCCcEEEEeeC---CCcCHHHHHHHH---HHCCCCEEEE
Confidence 33334445677889999985 666688887654 4579887543
No 157
>COG3207 DIT1 Pyoverdine/dityrosine biosynthesis protein [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=25.80 E-value=1.1e+02 Score=27.40 Aligned_cols=42 Identities=17% Similarity=0.188 Sum_probs=30.3
Q ss_pred ceecCCCceeeeCCCC-------------CHH-HHHHHHHHcCCCCCCeEEEecCc
Q 024080 42 VQPVKCPVTVCGDIHG-------------QFY-DLIELFRIGGNAPDTNYLFMGDY 83 (272)
Q Consensus 42 ~~~~~~~i~viGDIHG-------------~~~-~l~~~l~~~~~~~~~~~vflGD~ 83 (272)
+.+..++++|++|=|= .|. +|..+.+.++.+...+++++||.
T Consensus 101 ~Y~PG~ki~I~SDghvFsD~I~Vdddh~s~Y~d~Lr~m~~~i~~~~i~kI~n~e~~ 156 (330)
T COG3207 101 FYAPGAKITICSDGHVFSDLIRVDDDHISAYQDALRLMIEEIGATHIGKIFNLEDV 156 (330)
T ss_pred hcCCCCEEEEEeCCceehhhccccchhHHHHHHHHHHHHHHcCCCCccceeecchh
Confidence 3445678888888662 332 45667788888888889999885
No 158
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=25.64 E-value=4.2e+02 Score=23.07 Aligned_cols=37 Identities=24% Similarity=0.093 Sum_probs=26.2
Q ss_pred cchHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHhccC
Q 024080 4 HGDLDRQIEHLM-ECKPLPEAEVKTLCDQARAILVEEW 40 (272)
Q Consensus 4 ~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~l~~e~ 40 (272)
.+.=..+.+++. -+..++++|+..=+..|.++++++.
T Consensus 50 k~Sk~~l~~rL~rlgf~v~eeei~tsl~aa~~~~~~~~ 87 (262)
T KOG3040|consen 50 KESKRNLHERLQRLGFDVSEEEIFTSLPAARQYLEENQ 87 (262)
T ss_pred chhHHHHHHHHHHhCCCccHHHhcCccHHHHHHHHhcC
Confidence 333445666665 3457899999988888888887653
No 159
>KOG1602 consensus Cis-prenyltransferase [Lipid transport and metabolism]
Probab=25.61 E-value=1.1e+02 Score=27.22 Aligned_cols=49 Identities=18% Similarity=0.106 Sum_probs=32.6
Q ss_pred CHHHHHHHHHHHHHHHhc---cC-cceecCCCceeeeCCCCCHHHHHHHHHHc
Q 024080 21 PEAEVKTLCDQARAILVE---EW-NVQPVKCPVTVCGDIHGQFYDLIELFRIG 69 (272)
Q Consensus 21 ~~~~~~~l~~~~~~~l~~---e~-~~~~~~~~i~viGDIHG~~~~l~~~l~~~ 69 (272)
+++|+..|.+-+++.+++ +. .+-....||.|+||++==-.+|.+.+.++
T Consensus 97 s~eEVd~LM~L~~~k~~~~~~~~~~~~~~gvririiGdlslL~~~l~k~i~~i 149 (271)
T KOG1602|consen 97 SPEEVDGLMDLALEKIERLLEQGEKLDKYGVRIRVIGDLSLLPESLRKAIKKI 149 (271)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhhhhhcCeEEEEEcchhhCCHHHHHHHHHH
Confidence 566777666666555543 22 23345679999999998777777666654
No 160
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=25.55 E-value=4e+02 Score=22.26 Aligned_cols=77 Identities=21% Similarity=0.264 Sum_probs=54.5
Q ss_pred CCCCHHHHHHHHHHHHHHHhccCcceecCCCceeeeCCCCCHHHHHHHHHHcCCC-------------------------
Q 024080 18 KPLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNA------------------------- 72 (272)
Q Consensus 18 ~~~~~~~~~~l~~~~~~~l~~e~~~~~~~~~i~viGDIHG~~~~l~~~l~~~~~~------------------------- 72 (272)
..++++++.+=+.+..+.+.++..= ...++||=++|++-=+-.+++.+..+
T Consensus 10 vLisee~I~~ri~ela~~I~~~y~g----~~~~vv~iLkGs~~F~~dL~r~i~~~~e~dFm~vSSYg~~t~ssg~v~i~k 85 (178)
T COG0634 10 VLISEEQIKARIKELAAQITEDYGG----KDPLVVGVLKGSFPFMADLIRAIDFPLEVDFMHVSSYGGGTSSSGEVKILK 85 (178)
T ss_pred EeeCHHHHHHHHHHHHHHHHHhhCC----CceEEEEEcccchhhHHHHHHhcCCCceeEEEEEeccCCCcccCCceEEec
Confidence 3578889888777777666654432 56788999999988777777765432
Q ss_pred ------CCCeEEEecCccCCCCCcHHHHHHHH
Q 024080 73 ------PDTNYLFMGDYVDRGYYSVETVTLLV 98 (272)
Q Consensus 73 ------~~~~~vflGD~vDrG~~s~evl~~l~ 98 (272)
...+++++=|++|-|--=..+.+++.
T Consensus 86 Dld~di~grdVLiVeDIiDsG~TLs~i~~~l~ 117 (178)
T COG0634 86 DLDEDIKGRDVLIVEDIIDSGLTLSKVRDLLK 117 (178)
T ss_pred ccccCCCCCeEEEEecccccChhHHHHHHHHH
Confidence 13568889999999865555555554
No 161
>COG3365 Uncharacterized protein conserved in archaea [Function unknown]
Probab=25.19 E-value=1.1e+02 Score=23.38 Aligned_cols=40 Identities=20% Similarity=0.146 Sum_probs=33.3
Q ss_pred CCCcchHHHHHHHHhcCC------CCCHHHHHHHHHHHHHHHhccC
Q 024080 1 MPSHGDLDRQIEHLMECK------PLPEAEVKTLCDQARAILVEEW 40 (272)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~~~~~~l~~e~ 40 (272)
|+|-|++.-+|..++.+. .+++++..+|++.+.+.+.-|.
T Consensus 17 msSmEkvr~Iid~vr~G~IlVLE~gL~P~eeaklIe~TM~eId~e~ 62 (118)
T COG3365 17 MSSMEKVRYIIDKVREGDILVLEGGLTPEEEAKLIEMTMSEIDPEN 62 (118)
T ss_pred cchHHHHHHHHHhccCCcEEEEeCCCChHHHHHHHHHHHHhcCccc
Confidence 788899999999999885 5789999999998877765443
No 162
>TIGR00550 nadA quinolinate synthetase complex, A subunit. This protein, termed NadA, plays a role in the synthesis of pyridine, a precursor to NAD. The quinolinate synthetase complex consists of A protein (this protein) and B protein. B protein converts L-aspartate to iminoaspartate, an unstable reaction product which in the absence of A protein is spontaneously hydrolyzed to form oxaloacetate. The A protein, NadA, converts iminoaspartate to quinolate.
Probab=25.08 E-value=1.5e+02 Score=27.00 Aligned_cols=36 Identities=17% Similarity=0.170 Sum_probs=28.5
Q ss_pred CCCceeeeCCCCCHHHHHHHHHHcCCCCCCeEEEecCcc
Q 024080 46 KCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYV 84 (272)
Q Consensus 46 ~~~i~viGDIHG~~~~l~~~l~~~~~~~~~~~vflGD~v 84 (272)
+..+..++|+=|+-..|.++.+.. +.+.+||.||..
T Consensus 28 ~~Evk~~aD~~gdS~~l~~~a~~~---~~~~IvF~gv~f 63 (310)
T TIGR00550 28 KDEIQQIADYTGDSLELAQIAAKT---DADIIVFCGVHF 63 (310)
T ss_pred CHHHHHhhcceeeHHHHHHHHHhC---CCCEEEEeCCch
Confidence 456888999999888888777765 567799999974
No 163
>TIGR00006 S-adenosyl-methyltransferase MraW. Genetics paper in 1972 links mra cluster to peptidoglycan biosynthesis in E. coli. Seems to be common in proteobacteria.wn.
Probab=24.77 E-value=86 Score=28.52 Aligned_cols=46 Identities=20% Similarity=0.166 Sum_probs=29.2
Q ss_pred HHHHHHHHHHhccCcceecCCCceeeeCCCCCHHHHHHHHHHcCCCCCCeEEE-ec
Q 024080 27 TLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLF-MG 81 (272)
Q Consensus 27 ~l~~~~~~~l~~e~~~~~~~~~i~viGDIHG~~~~l~~~l~~~~~~~~~~~vf-lG 81 (272)
..++.+++.+... ..|+.+ +||++..+...+...+...-+-++| ||
T Consensus 55 ~Al~~ak~~L~~~------~~R~~~---i~~nF~~l~~~l~~~~~~~vDgIl~DLG 101 (305)
T TIGR00006 55 QAIAFAKERLSDF------EGRVVL---IHDNFANFFEHLDELLVTKIDGILVDLG 101 (305)
T ss_pred HHHHHHHHHHhhc------CCcEEE---EeCCHHHHHHHHHhcCCCcccEEEEecc
Confidence 3444555555422 235544 8999999999998877655555555 55
No 164
>PF02885 Glycos_trans_3N: Glycosyl transferase family, helical bundle domain Prosite entry for Thymidine and pyrimidine-nucleoside phosphorylases; InterPro: IPR017459 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. The glycosyl transferase family includes anthranilate phosphoribosyltransferase (TrpD, 2.4.2.18 from EC) and thymidine phosphorylase (2.4.2.2 from EC). All these proteins can transfer a phosphorylated ribose substrate. Thymidine phosphorylase (2.4.2.2 from EC) catalyses the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate. This enzyme regulates the availability of thymidine and is therefore essential to nucleic acid metabolism. This N-terminal domain is found in various family 3 glycosyl transferases, including anthranilate phosphoribosyltransferase (TrpD, 2.4.2.18 from EC) and thymidine phosphorylase (2.4.2.2 from EC). All these proteins can transfer a phosphorylated ribose substrate. Thymidine phosphorylase catalyses the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate. This enzyme regulates the availability of thymidine and is therefore essential to nucleic acid metabolism.; PDB: 2DSJ_B 2ELC_B 2BPQ_A 1ZVW_B 3QR9_B 1V8G_B 2WK5_C 2J0F_C 2WK6_B 1UOU_A ....
Probab=24.21 E-value=1.2e+02 Score=20.53 Aligned_cols=27 Identities=19% Similarity=0.270 Sum_probs=19.0
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHH
Q 024080 7 LDRQIEHLMECKPLPEAEVKTLCDQAR 33 (272)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~l~~~~~ 33 (272)
+..+++++.++..++.+++.++++...
T Consensus 2 ~~~~l~~l~~g~~Ls~~e~~~~~~~i~ 28 (66)
T PF02885_consen 2 IKEILKKLRDGEDLSREEAKAAFDAIL 28 (66)
T ss_dssp HHHHHHHHHTT----HHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCHHHHHHHHHHHH
Confidence 678899999999999999998887543
No 165
>COG0770 MurF UDP-N-acetylmuramyl pentapeptide synthase [Cell envelope biogenesis, outer membrane]
Probab=23.96 E-value=4.9e+02 Score=25.08 Aligned_cols=74 Identities=18% Similarity=0.145 Sum_probs=52.7
Q ss_pred CCCceeeeC-CCCCHHHHHHHHHHcCCCCCCe-EEEecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEccCcchhhh
Q 024080 46 KCPVTVCGD-IHGQFYDLIELFRIGGNAPDTN-YLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQI 120 (272)
Q Consensus 46 ~~~i~viGD-IHG~~~~l~~~l~~~~~~~~~~-~vflGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrGNHE~~~~ 120 (272)
.....+|-| ..++.+.+.+.++.+...+..+ ++.|||+.--|.+|.++=+.+-+......-...++-|. +...+
T Consensus 325 ~~g~~iIdD~YNAnp~sm~aai~~l~~~~~~~~i~VlGdM~ELG~~s~~~H~~v~~~~~~~~~d~v~~~G~-~~~~i 400 (451)
T COG0770 325 ANGKTLIDDSYNANPDSMRAALDLLAALPGRKGIAVLGDMLELGEESEELHEEVGEYAVEAGIDLVFLVGE-LSKAI 400 (451)
T ss_pred CCCcEEEEcCCCCCHHHHHHHHHHHhhCccCCcEEEeCChhhhCccHHHHHHHHHHHHHhcCceEEEEEcc-chHHH
Confidence 344455555 5788999999988887655555 78999999999999988777776655432256777888 44333
No 166
>PF09846 DUF2073: Uncharacterized protein conserved in archaea (DUF2073); InterPro: IPR012017 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=23.76 E-value=98 Score=23.39 Aligned_cols=37 Identities=14% Similarity=0.154 Sum_probs=32.2
Q ss_pred CCCcchHHHHHHHHhcCC------CCCHHHHHHHHHHHHHHHh
Q 024080 1 MPSHGDLDRQIEHLMECK------PLPEAEVKTLCDQARAILV 37 (272)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~~~~~~l~ 37 (272)
|+|-|++.-+++.++.+. .++++|-.+|++.+...+.
T Consensus 4 mssmEKir~ILd~Vk~G~IvVLE~GLtPeEe~~LIE~TM~eI~ 46 (104)
T PF09846_consen 4 MSSMEKIRLILDKVKDGNIVVLEEGLTPEEESKLIEMTMTEID 46 (104)
T ss_pred cchHHHHHHHHhhcccCcEEEEcCCCChHHHHHHHHHHHHhcC
Confidence 889999999999999885 4789999999998877766
No 167
>PRK15455 PrkA family serine protein kinase; Provisional
Probab=23.45 E-value=7.8e+02 Score=24.92 Aligned_cols=67 Identities=19% Similarity=0.174 Sum_probs=42.9
Q ss_pred CceeeeCCCCCHHHHHHHHHHc-----CCCCCCeEE-EecCccCCCCCcHHHHHHHHHhhHhcCCcEEEEcc------Cc
Q 024080 48 PVTVCGDIHGQFYDLIELFRIG-----GNAPDTNYL-FMGDYVDRGYYSVETVTLLVALKVRYRDRITILRG------NH 115 (272)
Q Consensus 48 ~i~viGDIHG~~~~l~~~l~~~-----~~~~~~~~v-flGD~vDrG~~s~evl~~l~~l~~~~p~~v~~lrG------NH 115 (272)
+.-++.|++|.-+...++++-+ +.....+++ ++|=- +-|.-| +.+.|......+| ++.+.| -|
T Consensus 71 ry~fF~d~yGlee~ieriv~~l~~Aa~gl~~~~~IL~LvGPp-G~GKSs--La~~la~~le~~~--~Y~~kg~~~~sP~~ 145 (644)
T PRK15455 71 RYPAFEEFYGMEEAIEQIVSYFRHAAQGLEEKKQILYLLGPV-GGGKSS--LAERLKSLMERVP--IYVLKANGERSPVN 145 (644)
T ss_pred cccchhcccCcHHHHHHHHHHHHHHHHhcCCCCceEEEecCC-CCCchH--HHHHHHHHHHhCc--ceeecCCCCCCCCC
Confidence 5667889999999998887654 333344444 56654 334443 4455555556665 889988 56
Q ss_pred chhh
Q 024080 116 ESRQ 119 (272)
Q Consensus 116 E~~~ 119 (272)
|..+
T Consensus 146 e~PL 149 (644)
T PRK15455 146 ESPL 149 (644)
T ss_pred CCCC
Confidence 6654
No 168
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=23.31 E-value=1.6e+02 Score=25.15 Aligned_cols=30 Identities=20% Similarity=0.171 Sum_probs=23.3
Q ss_pred HHHHHcCCcEEEEcCCCCccCeeEeCCCeEE
Q 024080 224 QFNHTNGLSLISRAHQLVMEGYNWCQVWNLK 254 (272)
Q Consensus 224 ~fl~~~~~~~iirgH~~~~~G~~~~~~~~li 254 (272)
+.+-..|+++||-||+-+..+++. +++++|
T Consensus 201 ~~l~~~G~D~IiG~H~Hv~q~~E~-~~~~~I 230 (239)
T cd07381 201 RALIDAGADLVIGHHPHVLQGIEI-YKGKLI 230 (239)
T ss_pred HHHHHCCCCEEEcCCCCcCCCeEE-ECCEEE
Confidence 334446999999999999999987 566664
No 169
>PF02609 Exonuc_VII_S: Exonuclease VII small subunit; InterPro: IPR003761 Exonuclease VII is composed of two non-identical subunits; one large subunit and 4 small ones []. This enzyme catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield nucleoside 5'-phosphates.; GO: 0008855 exodeoxyribonuclease VII activity, 0006308 DNA catabolic process, 0009318 exodeoxyribonuclease VII complex; PDB: 1VP7_F.
Probab=23.02 E-value=2e+02 Score=18.53 Aligned_cols=36 Identities=17% Similarity=0.187 Sum_probs=27.0
Q ss_pred chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhccCc
Q 024080 5 GDLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWN 41 (272)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~e~~ 41 (272)
+.++.+++++.++ .++-++...+.+++.+.++....
T Consensus 6 ~~Le~Iv~~Le~~-~~sLdes~~lyeeg~~l~~~c~~ 41 (53)
T PF02609_consen 6 ERLEEIVEKLESG-ELSLDESLKLYEEGMELIKKCQE 41 (53)
T ss_dssp HHHHHHHHHHHTT--S-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 4578888888875 56999999999999988776443
No 170
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=22.18 E-value=1.7e+02 Score=25.00 Aligned_cols=29 Identities=14% Similarity=0.003 Sum_probs=24.3
Q ss_pred ccCHHHHHHHHHHcCCcEEEEcCCCCccC
Q 024080 216 TFGQDIASQFNHTNGLSLISRAHQLVMEG 244 (272)
Q Consensus 216 ~fg~~~~~~fl~~~~~~~iirgH~~~~~G 244 (272)
.+|...+.+++++.+++.+|.||.-...+
T Consensus 195 ~~~s~~l~~li~~~~v~~~i~GH~H~~~~ 223 (239)
T TIGR03729 195 FLGSQHFGQLLVKYEIKDVIFGHLHRRFG 223 (239)
T ss_pred ccChHHHHHHHHHhCCCEEEECCccCCCC
Confidence 46788899999999999999999776543
No 171
>PRK11475 DNA-binding transcriptional activator BglJ; Provisional
Probab=21.83 E-value=1.8e+02 Score=24.60 Aligned_cols=51 Identities=6% Similarity=0.050 Sum_probs=27.3
Q ss_pred HHHHHHcCCCCCCeEEEecCccCC---CCCcHHHHHHHHHhhHhcCC-cEEEEccCcchh
Q 024080 63 IELFRIGGNAPDTNYLFMGDYVDR---GYYSVETVTLLVALKVRYRD-RITILRGNHESR 118 (272)
Q Consensus 63 ~~~l~~~~~~~~~~~vflGD~vDr---G~~s~evl~~l~~l~~~~p~-~v~~lrGNHE~~ 118 (272)
..+++.....+.+ ++.+ |+.|- |.+.++++..+ +..+|+ +++++-|..+..
T Consensus 27 ~~~l~~~~~~~pd-~vl~-dl~d~~mp~~~Gl~~~~~l---~~~~p~~~iIvlt~~~~~~ 81 (207)
T PRK11475 27 SSFQDAMSRISFS-AVIF-SLSAMRSERREGLSCLTEL---AIKFPRMRRLVIADDDIEA 81 (207)
T ss_pred HHHHHHhccCCCC-EEEe-eccccCCCCCCHHHHHHHH---HHHCCCCCEEEEeCCCCHH
Confidence 3444444333333 4544 77774 44556655555 445565 677787765443
No 172
>smart00411 BHL bacterial (prokaryotic) histone like domain.
Probab=21.62 E-value=1.6e+02 Score=20.84 Aligned_cols=31 Identities=19% Similarity=0.232 Sum_probs=22.7
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHh
Q 024080 7 LDRQIEHLMECKPLPEAEVKTLCDQARAILV 37 (272)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 37 (272)
-.++++.+.....++..++..+++...+.+.
T Consensus 3 k~eli~~ia~~~~~~~~~v~~vl~~l~~~i~ 33 (90)
T smart00411 3 KSELIDAIAEKAGLSKKDAKAAVDAFLEIIT 33 (90)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Confidence 5667777776667888888888877666654
No 173
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=21.49 E-value=2.7e+02 Score=23.93 Aligned_cols=62 Identities=15% Similarity=0.158 Sum_probs=41.7
Q ss_pred cCCCCCHHHHHHHHHHHHHHHhccCcceecCCCceeeeCCC------CCHHHHHHHHHHcCCCCCCeEEEecCccCC
Q 024080 16 ECKPLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIH------GQFYDLIELFRIGGNAPDTNYLFMGDYVDR 86 (272)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~~~l~~e~~~~~~~~~i~viGDIH------G~~~~l~~~l~~~~~~~~~~~vflGD~vDr 86 (272)
++..++..+..+.++++.+++.+.. ...+++.||+- ..+..+.++++.+. ..-++.-|+- |.
T Consensus 34 ~Gi~~P~~~~~~~l~rl~~li~~~~-----~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~~---~~v~~V~GNH-D~ 101 (225)
T TIGR00024 34 QGVMVPGFQFREIIERALSIADKYG-----IEALIINGDLKHEFKKGLEWRFIREFIEVTF---RDLILIRGNH-DA 101 (225)
T ss_pred cCCcCChhHHHHHHHHHHHHHhhcC-----CCEEEEcCccccccCChHHHHHHHHHHHhcC---CcEEEECCCC-CC
Confidence 4556788788888888888876543 23688999986 23555666676543 3456667876 44
Done!