BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024081
(272 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|F4IEY4|TRB5_ARATH Telomere repeat-binding factor 5 OS=Arabidopsis thaliana
GN=At1g72740 PE=2 SV=1
Length = 287
Score = 231 bits (588), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 143/291 (49%), Positives = 186/291 (63%), Gaps = 23/291 (7%)
Query: 1 MGNPKQKWTAEEEEALRAGVAKHGTGKWKNIQRDPEFNPFLFSRSNIDLKDKWRNMSV-- 58
MGN K KWTAEEEEAL AG+ KHG GKWKNI RDPEF L RSNIDLKDKWRN+SV
Sbjct: 1 MGNQKLKWTAEEEEALLAGIRKHGPGKWKNILRDPEFADQLIHRSNIDLKDKWRNLSVPP 60
Query: 59 --SAPREKSRTLKPKAGSDAP------AVPLSTPQTSALPAAVPIDASADPITDESARSS 110
+ K+R K K D P AV + P + P ++ I DE+ + +
Sbjct: 61 GTQSLTNKARPAKVKEEGDTPAADANDAVTIPRPIPTIPPPPGRRTLPSELIPDENTK-N 119
Query: 111 APKYNALIFEAISALKEPNGSDVSAILSYIEQRLEVPPNFRRLLSSRLRRLVAQEKLEKV 170
AP+Y+ +IFEA+SAL + NGSDVS+I +IE R EVPPNFRR+LS+RLRRL AQ KLEKV
Sbjct: 120 APRYDGVIFEALSALADGNGSDVSSIYHFIEPRHEVPPNFRRILSTRLRRLAAQSKLEKV 179
Query: 171 ------QNCFKVKEDASLGTKTPNPKQKDTRPKLLHSTNDVSPADT---VQEAAAAAAGQ 221
QN +K+ + + GTK PK K+T KL + N S AD+ ++EAA AA +
Sbjct: 180 STFKSIQNFYKIPDPS--GTKIGVPKPKETHTKLRQANNQTS-ADSQQMIEEAAITAACK 236
Query: 222 VADAENKSFVAAEAVKEAERVSRMAEDTDSLLQLAKEIFERCSRGEIVVVA 272
V +AENK VA A +E E+++++AE+ LL +A E+ E CS GE +++A
Sbjct: 237 VVEAENKIDVAKLAAEEFEKMTKIAEENRKLLVIATEMHELCSCGETMLLA 287
>sp|F4I7L1|TRB4_ARATH Telomere repeat-binding factor 4 OS=Arabidopsis thaliana
GN=At1g17520 PE=2 SV=2
Length = 296
Score = 207 bits (527), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 141/296 (47%), Positives = 189/296 (63%), Gaps = 26/296 (8%)
Query: 1 MGNPKQKWTAEEEEALRAGVAKHGTGKWKNIQRDPEFNPFLFSRSNIDLKDKWRNMSVS- 59
MGN K KWTAEEEEAL AGV KHG GKWKNI RDPE L SRSNIDLKDKWRN+SV+
Sbjct: 1 MGNQKLKWTAEEEEALLAGVRKHGPGKWKNILRDPELAEQLSSRSNIDLKDKWRNLSVAP 60
Query: 60 ---APREKSRTLKPK----AGSDAPAVPLSTPQTSALP---AAVPIDASADPITDESAR- 108
++K RT K K + A A + TP S A +P S+D D+S
Sbjct: 61 GIQGSKDKIRTPKIKAAAFHLAAAAAAAIVTPTHSGHSSPVATLPRSGSSDLSIDDSFNI 120
Query: 109 ----SSAPKYNALIFEAISALKEPNGSDVSAILSYIEQRLEVPPNFRRLLSSRLRRLVAQ 164
+AP+Y+ +IFEA+S L + NGSDVSAI ++IEQR EVPPNFRR+LSSRLRRL AQ
Sbjct: 121 VADPKNAPRYDGMIFEALSNLTDANGSDVSAIFNFIEQRQEVPPNFRRMLSSRLRRLAAQ 180
Query: 165 EKLEKV------QNCFKVKEDASLGTKTPN---PKQKDTRPKLLHSTNDVSPADTVQEAA 215
KLEKV QN +K+ D SL +TP+ PK+ +T+ + ++ S + + EA+
Sbjct: 181 GKLEKVSHLKSTQNFYKMN-DNSLVQRTPHVARPKESNTKSRQQTNSQGPSISQQIVEAS 239
Query: 216 AAAAGQVADAENKSFVAAEAVKEAERVSRMAEDTDSLLQLAKEIFERCSRGEIVVV 271
AA ++ + ENK V+ A +E ER+ ++AE+ D +L +A+E+ E CS+G+I+ +
Sbjct: 240 ITAAYKLVEVENKLDVSKGAAEEIERLMKLAEEADEMLVIAREMHEECSQGKIMYL 295
>sp|Q8VWK4|TRB1_ARATH Telomere repeat-binding factor 1 OS=Arabidopsis thaliana GN=TRB1
PE=1 SV=1
Length = 300
Score = 146 bits (369), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/187 (44%), Positives = 113/187 (60%), Gaps = 15/187 (8%)
Query: 1 MGNPKQKWTAEEEEALRAGVAKHGTGKWKNIQRDPEFNPFLFSRSNIDLKDKWRNMSVSA 60
MG PKQKWT EEE AL++GV KHG GKW+ I +DPEF+ L+ RSN+DLKDKWRNMSV A
Sbjct: 1 MGAPKQKWTQEEESALKSGVIKHGPGKWRTILKDPEFSGVLYLRSNVDLKDKWRNMSVMA 60
Query: 61 ----PREKSRTLKPKAGSDAPAVPLSTPQTSALPAAVPIDASADPITDESARSSAP---- 112
REKSR + S +P + AL ++ D T SS P
Sbjct: 61 NGWGSREKSRLAVKRTFS----LPKQEENSLALTNSLQSDEENVDATSGLQVSSNPPPRR 116
Query: 113 ---KYNALIFEAISALKEPNGSDVSAILSYIEQRLEVPPNFRRLLSSRLRRLVAQEKLEK 169
+ ++LI EAI+ LKEP G + + I +YIE + PP+F+RLLS++L+ L + KL K
Sbjct: 117 PNVRLDSLIMEAIATLKEPGGCNKTTIGAYIEDQYHAPPDFKRLLSTKLKYLTSCGKLVK 176
Query: 170 VQNCFKV 176
V+ +++
Sbjct: 177 VKRKYRI 183
>sp|Q9M2X3|TRB3_ARATH Telomere repeat-binding factor 3 OS=Arabidopsis thaliana GN=TRB3
PE=1 SV=1
Length = 295
Score = 130 bits (327), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 115/189 (60%), Gaps = 11/189 (5%)
Query: 1 MGNPKQKWTAEEEEALRAGVAKHGTGKWKNIQRDPEFNPFLFSRSNIDLKDKWRNMSVSA 60
MG PK KWT EEE AL+AGV KHGTGKW+ I DP ++ L SRSN+DLKDKWRN+SV+A
Sbjct: 1 MGAPKLKWTPEEETALKAGVLKHGTGKWRTILSDPVYSTILKSRSNVDLKDKWRNISVTA 60
Query: 61 ---PREKSR-TLK--PKAGS----DAPAVPLSTPQTSALPAAVPIDASADPITDESARSS 110
R+K++ LK P +GS +A A+ + + + IDA + P
Sbjct: 61 LWGSRKKAKLALKRTPLSGSRQDDNATAITIVSLANGDV-GGQQIDAPSPPAGSCEPPRP 119
Query: 111 APKYNALIFEAISALKEPNGSDVSAILSYIEQRLEVPPNFRRLLSSRLRRLVAQEKLEKV 170
+ + +I EAI++LK P G D +IL YIE+ ++ P+ +RL++SRL+ L L K
Sbjct: 120 STSVDKIILEAITSLKRPFGPDGKSILMYIEENFKMQPDMKRLVTSRLKYLTNVGTLVKK 179
Query: 171 QNCFKVKED 179
++ +++ ++
Sbjct: 180 KHKYRISQN 188
>sp|Q9FJW5|TRB2_ARATH Telomere repeat-binding factor 2 OS=Arabidopsis thaliana GN=TRB2
PE=1 SV=1
Length = 299
Score = 129 bits (325), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 104/187 (55%), Gaps = 11/187 (5%)
Query: 1 MGNPKQKWTAEEEEALRAGVAKHGTGKWKNIQRDPEFNPFLFSRSNIDLKDKWRNMSVSA 60
MG PKQKWT EEE AL+AGV KHGTGKW+ I D EF+ L SRSN+DLKDKWRN+SV+A
Sbjct: 1 MGAPKQKWTPEEEAALKAGVLKHGTGKWRTILSDTEFSLILKSRSNVDLKDKWRNISVTA 60
Query: 61 PREKSRTLKPKAGSDAPAVPLSTPQTSALPAAVPID------ASADPITDESARSSAPK- 113
+ K P T+ A+ D S S R+ A K
Sbjct: 61 LWGSRKKAKLALKRTPPGTKQDDNNTALTIVALTNDDERAKPTSPGGSGGGSPRTCASKR 120
Query: 114 ----YNALIFEAISALKEPNGSDVSAILSYIEQRLEVPPNFRRLLSSRLRRLVAQEKLEK 169
+ +IFEAI+ L+E GSD ++I YIE+ + PPN +R ++ RL+ L + L K
Sbjct: 121 SITSLDKIIFEAITNLRELRGSDRTSIFLYIEENFKTPPNMKRHVAVRLKHLSSNGTLVK 180
Query: 170 VQNCFKV 176
+++ ++
Sbjct: 181 IKHKYRF 187
>sp|P26569|H12_ARATH Histone H1.2 OS=Arabidopsis thaliana GN=At2g30620 PE=1 SV=1
Length = 273
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 94 PIDASADPITDESARSSAPKYNALIFEAISALKEPNGSDVSAILSYIEQRLE-VPPNFRR 152
P+ A+A T + SS P Y +I +AI LKE GS AI +IE++ + +PP FR+
Sbjct: 47 PVKAAAP--TKKKTTSSHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRK 104
Query: 153 LLSSRLRRLVAQEKLEKVQNCFKVKEDASLGTKTP 187
LL L+RLVA EKL KV+ FK+ S T P
Sbjct: 105 LLLVNLKRLVASEKLVKVKASFKIPSARSAATPKP 139
>sp|P23444|H1_MAIZE Histone H1 OS=Zea mays PE=2 SV=2
Length = 246
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
Query: 114 YNALIFEAISALKEPNGSDVSAILSYIE--QRLEVPPNFRRLLSSRLRRLVAQEKLEKVQ 171
Y ++ EAI++LKE GS AI ++E + ++PPNFR+LL+ +L++LVA KL KV+
Sbjct: 53 YAEMVSEAITSLKERTGSSSYAIAKFVEDKHKAKLPPNFRKLLNVQLKKLVAGGKLTKVK 112
Query: 172 NCFKV 176
N +K+
Sbjct: 113 NSYKL 117
>sp|P27806|H1_WHEAT Histone H1 OS=Triticum aestivum PE=2 SV=2
Length = 238
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 112 PKYNALIFEAISALKEPNGSDVSAILSYIE--QRLEVPPNFRRLLSSRLRRLVAQEKLEK 169
P Y ++ EAI+ALKE +GS AI +IE + +P NFR++L +++++LVA KL K
Sbjct: 56 PSYAEMVSEAIAALKERSGSSTIAIGKFIEDKHKAHLPANFRKILLTQIKKLVAAGKLTK 115
Query: 170 VQNCFKV 176
V+ +K+
Sbjct: 116 VKGSYKL 122
>sp|Q9PU53|TERF2_CHICK Telomeric repeat-binding factor 2 OS=Gallus gallus GN=TERF2 PE=1
SV=2
Length = 718
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 4/56 (7%)
Query: 1 MGNPKQKWTAEEEEALRAGVAKHGTGKWKNIQRDPEFNPFLFSRSNIDLKDKWRNM 56
G+ KQKWT +E E ++ GV K+G G+WK I E PF +R+++ +KD++R M
Sbjct: 661 YGSKKQKWTVQESEWIKDGVRKYGEGRWKTIS---EKYPFQ-NRTSVQIKDRYRTM 712
>sp|Q15554|TERF2_HUMAN Telomeric repeat-binding factor 2 OS=Homo sapiens GN=TERF2 PE=1
SV=2
Length = 500
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 4/52 (7%)
Query: 5 KQKWTAEEEEALRAGVAKHGTGKWKNIQRDPEFNPFLFSRSNIDLKDKWRNM 56
KQKWT EE E ++AGV K+G G W I ++ PF+ +R+ + +KD+WR M
Sbjct: 447 KQKWTVEESEWVKAGVQKYGEGNWAAISKN---YPFV-NRTAVMIKDRWRTM 494
>sp|O55036|TERF1_CRIGR Telomeric repeat-binding factor 1 (Fragment) OS=Cricetulus griseus
GN=TERF1 PE=2 SV=1
Length = 438
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 4/52 (7%)
Query: 5 KQKWTAEEEEALRAGVAKHGTGKWKNIQRDPEFNPFLFSRSNIDLKDKWRNM 56
+Q W EE++ LR+GV K+G G W I +FN +R+++ LKD+WR M
Sbjct: 380 RQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFN----NRTSVMLKDRWRTM 427
>sp|P54274|TERF1_HUMAN Telomeric repeat-binding factor 1 OS=Homo sapiens GN=TERF1 PE=1
SV=3
Length = 439
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 4/52 (7%)
Query: 5 KQKWTAEEEEALRAGVAKHGTGKWKNIQRDPEFNPFLFSRSNIDLKDKWRNM 56
+Q W EE++ LR+GV K+G G W I +FN +R+++ LKD+WR M
Sbjct: 380 RQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFN----NRTSVMLKDRWRTM 427
>sp|P70371|TERF1_MOUSE Telomeric repeat-binding factor 1 OS=Mus musculus GN=Terf1 PE=1
SV=1
Length = 421
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 5 KQKWTAEEEEALRAGVAKHGTGKWKNIQRDPEFNPFLFSRSNIDLKDKWRNM 56
+Q W EE+ L+ GV K+G G W I +FN +R+++ LKD+WR M
Sbjct: 367 RQTWLWEEDRILKCGVKKYGEGNWAKILSHYKFN----NRTSVMLKDRWRTM 414
>sp|P40267|H1_SOLPN Histone H1 OS=Solanum pennellii PE=2 SV=1
Length = 202
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 112 PKYNALIFEAISALKEPNGSDVSAILSYIEQRL--EVPPNFRRLLSSRLRRLVAQEKLEK 169
P Y +I EA+ AL E GS A+ Y+E + E+P NFR++L +L+ A+ KL K
Sbjct: 50 PPYFQMIKEALLALNEKGGSSPYAVAKYMEDKHKDELPANFRKILGLQLKNSAAKGKLIK 109
Query: 170 VQNCFKVKE 178
++ +K+ E
Sbjct: 110 IKASYKLSE 118
>sp|O35144|TERF2_MOUSE Telomeric repeat-binding factor 2 OS=Mus musculus GN=Terf2 PE=1
SV=3
Length = 541
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 4/52 (7%)
Query: 5 KQKWTAEEEEALRAGVAKHGTGKWKNIQRDPEFNPFLFSRSNIDLKDKWRNM 56
KQKWT EE E ++ GV K+G G W I + PF+ +R+ + +KD+WR M
Sbjct: 488 KQKWTIEESEWVKDGVRKYGEGNWAAISKS---YPFV-NRTAVMIKDRWRTM 535
>sp|P54671|H1_DICDI Histone H1 OS=Dictyostelium discoideum GN=H1 PE=1 SV=3
Length = 180
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 112 PKYNALIFEAISALKEPNGSDVSAILSYIEQRLEVPPN-FRRLLSSRLRRLVAQEKLEKV 170
P Y +I AI+ K+ GS AI+ YIE V P+ F+ L L+RLVA+ L V
Sbjct: 25 PTYQVMISTAIAHYKDRTGSSQPAIIKYIEANYNVAPDTFKTQLKLALKRLVAKGTLTMV 84
Query: 171 QNCFKVKED------ASLG 183
+ +K+ E+ A+LG
Sbjct: 85 KASYKLSEEGKKEHQATLG 103
>sp|P37218|H1_SOLLC Histone H1 OS=Solanum lycopersicum PE=3 SV=1
Length = 287
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 106 SARSSAPKYNALIFEAISALKEPNGSDVSAILSYIEQRLE-VPPNFRRLLSSRLRRLVAQ 164
SA + P Y +I +AI LKE GS AI +IE++ + +P NF++LL ++L++ VA
Sbjct: 51 SATPTHPPYFEMIKDAIVTLKERTGSSQHAITKFIEEKQKSLPSNFKKLLLTQLKKFVAS 110
Query: 165 EKLEKVQNCFKV 176
EKL KV+N +K+
Sbjct: 111 EKLVKVKNSYKL 122
>sp|P26568|H11_ARATH Histone H1.1 OS=Arabidopsis thaliana GN=At1g06760 PE=2 SV=1
Length = 274
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 109 SSAPKYNALIFEAISALKEPNGSDVSAILSYIEQ-RLEVPPNFRRLLSSRLRRLVAQEKL 167
SS P Y +I +AI LKE GS AI +IE+ R E+PP FR+LL L+RLVA KL
Sbjct: 60 SSHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKRKELPPTFRKLLLLNLKRLVASGKL 119
Query: 168 EKVQNCFKV 176
KV+ FK+
Sbjct: 120 VKVKASFKL 128
>sp|Q9M5W4|H1_EUPES Histone H1 OS=Euphorbia esula PE=2 SV=1
Length = 229
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 109 SSAPKYNALIFEAISALKEPNGSDVSAILSYIEQRL-EVPPNFRRLLSSRLRRLVAQEKL 167
SS P + +I +AIS LKE GS AI ++E + ++P NFR+LL L++LVA KL
Sbjct: 49 SSHPSFFEMISDAISTLKERTGSSQYAINKFVEDKHKQLPSNFRKLLLFHLKKLVASGKL 108
Query: 168 EKVQNCFK 175
KV+N FK
Sbjct: 109 VKVKNSFK 116
>sp|P08283|H1_PEA Histone H1 OS=Pisum sativum PE=2 SV=1
Length = 265
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 109 SSAPKYNALIFEAISALKEPNGSDVSAILSYIEQRL-EVPPNFRRLLSSRLRRLVAQEKL 167
+S P Y +I +AI +LKE NGS AI +IE++ ++P NF++LL L++ VA KL
Sbjct: 60 ASHPTYEEMIKDAIVSLKEKNGSSQYAIAKFIEEKQKQLPANFKKLLLQNLKKNVASGKL 119
Query: 168 EKVQNCFKV 176
KV+ FK+
Sbjct: 120 IKVKGSFKL 128
>sp|Q08864|H11_VOLCA Histone H1-I OS=Volvox carteri GN=H1-I PE=2 SV=3
Length = 261
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 112 PKYNALIFEAISALKEPNGSDVSAILSYIEQRLEV---PPNFRRLLSSRLRRLVAQEKLE 168
P Y ++ +AI+ LKE NGS + A+ +IE + NF + LS ++ V KL
Sbjct: 60 PPYIEMVKDAITTLKERNGSSLPALKKFIENKYGKDIHDKNFAKTLSQVVKTFVKGGKLV 119
Query: 169 KVQNCFKVKEDASLGTKTPNPKQ 191
KV+ FK+ E K PK+
Sbjct: 120 KVKGSFKLSEALKAKAKKSTPKK 142
>sp|Q10274|MU152_SCHPO Meiotically up-regulated gene 152 protein OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mug152 PE=1 SV=1
Length = 390
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 4 PKQKWTAEEEEALRAGVAKHGTGKWKNIQRDPEFNPFLFSRSNIDLKDKWRNM 56
P+ KWT +E L G HG G WK I D F+ +RS DLKD++R +
Sbjct: 54 PRVKWTEKETNDLLRGCQIHGVGNWKKILLDERFH--FTNRSPNDLKDRFRTI 104
>sp|Q9UV33|H1_ASCIM Histone H1 OS=Ascobolus immersus PE=3 SV=1
Length = 213
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 112 PKYNALIFEAISALKEPNGSDVSAILSYIEQRLEVPPNFRRLLSSRLRRLVAQEKLEKVQ 171
P Y ++ +AI+ LKE NGS AI +I+ +V NF + LRR V EK E VQ
Sbjct: 28 PSYKEMLTKAITELKERNGSSRQAIKKFIQSNFKVKDNFDVQFNQALRRGV--EKGEFVQ 85
>sp|Q9M347|TRP6_ARATH Telomere repeat-binding protein 6 OS=Arabidopsis thaliana GN=TRP6
PE=1 SV=1
Length = 400
Score = 40.8 bits (94), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 8 WTAEEEEALRAGVAKHGTGKWKNIQRDPEFNPFLFSRSNIDLKDKWRNMSVSA 60
+T E EAL V + GTG+W+++ + FN + R+ +DLKDKW+ + +A
Sbjct: 318 FTVSEVEALVQAVERLGTGRWRDV-KSHAFN-HVNHRTYVDLKDKWKTLVHTA 368
>sp|P52551|MYBB_XENLA Myb-related protein B OS=Xenopus laevis GN=mybl2 PE=2 SV=2
Length = 743
Score = 40.8 bits (94), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 5 KQKWTAEEEEALRAGVAKHGTGKWKNI 31
K KWT EE+E L+A V KHG G+WK I
Sbjct: 31 KVKWTPEEDETLKALVKKHGQGEWKTI 57
>sp|Q9LL45|TBP1_ORYSJ Telomere-binding protein 1 OS=Oryza sativa subsp. japonica GN=TBP1
PE=1 SV=2
Length = 633
Score = 40.0 bits (92), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 5 KQKWTAEEEEALRAGVAKHGTGKWKNIQRDPEFNPF--LFSRSNIDLKDKWRNMSVSA 60
++ +T E E L V GTG+W RD +F F + R+ +DLKDKW+ + +A
Sbjct: 534 RRPFTVAEVELLVEAVEHLGTGRW----RDVKFRAFENVHHRTYVDLKDKWKTLVHTA 587
>sp|P15870|H1D_STRPU Histone H1-delta OS=Strongylocentrotus purpuratus PE=3 SV=1
Length = 185
Score = 39.3 bits (90), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 109 SSAPKYNALIFEAISALKEPNGSDVSAILSYIEQRLEVPPNFRRLLSSRLRRLVAQEKLE 168
+S PKY+ +I A+ +LKE GS AIL Y++ V N + L+R V +L
Sbjct: 31 ASHPKYSDMIASALESLKEKKGSSRQAILKYVKANFTVGDNANVHIKQALKRGVTSGQLR 90
Query: 169 KVQN 172
V+
Sbjct: 91 HVKG 94
>sp|Q00423|HMGYA_SOYBN HMG-Y-related protein A OS=Glycine max PE=2 SV=1
Length = 176
Score = 39.3 bits (90), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 110 SAPKYNALIFEAISALKEPNGSDVSAILSYIEQRLEVPPNFRRLLSSRLRRLVAQEKLEK 169
S P Y +I + + AL EPNGS+ SAI YIE P+ +L S L ++ +L
Sbjct: 11 SLPPYPEMIVKTLEALNEPNGSNKSAISKYIETTYGELPDA-TVLGSHLNKMKDSGELSF 69
Query: 170 VQNCF 174
QN +
Sbjct: 70 KQNNY 74
>sp|Q08865|H12_VOLCA Histone H1-II OS=Volvox carteri GN=H1-II PE=2 SV=3
Length = 241
Score = 38.9 bits (89), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Query: 73 GSDAPAVPLSTPQTSALPAAVPIDASADPITDESARSSAPKYNALIFEAISALKEPNGSD 132
SDAP V +T P P + P Y ++ +AI +LKE +GS
Sbjct: 2 ASDAPEVKAPKAKTQKKPKTAP---------------THPPYIQMVTDAILSLKERDGSS 46
Query: 133 VSAILSYIEQRLEVPPN---FRRLLSSRLRRLVAQEKLEKVQNCFKV 176
+ A+ +IE + + F + LS L+ V KL KV+N +K+
Sbjct: 47 LPALKKFIEAKYGKDIHDKKFPKTLSLALKTFVKNGKLVKVKNSYKL 93
>sp|P32657|CHD1_YEAST Chromo domain-containing protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CHD1 PE=1 SV=1
Length = 1468
Score = 38.5 bits (88), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 3 NPKQKWTAEEEEALRAGVAKHGTGKWKNIQRDP 35
N WT EE+E L GV K+G G W I+ DP
Sbjct: 1170 NWSSNWTKEEDEKLLIGVFKYGYGSWTQIRDDP 1202
>sp|Q9US25|HRP1_SCHPO Chromodomain helicase hrp1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=hrp1 PE=1 SV=1
Length = 1373
Score = 36.6 bits (83), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 8 WTAEEEEALRAGVAKHGTGKWKNIQRDPEF 37
W +E+ L AG+ KHG G W+ I+ DP+
Sbjct: 1132 WGIKEDSMLLAGINKHGFGCWQAIKNDPDL 1161
>sp|Q9FFY9|TRP4_ARATH Telomere repeat-binding protein 4 OS=Arabidopsis thaliana GN=TRP4
PE=1 SV=1
Length = 640
Score = 36.6 bits (83), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 5 KQKWTAEEEEALRAGVAKHGTGKWKNIQRDPEFNPFLFSRSNIDLKDKWRNMSVSA 60
++ ++ E EAL + V + GTG+W++++ N R+ +DLKDKW+ + +A
Sbjct: 535 RRPFSVTEVEALVSAVEEVGTGRWRDVKLRSFENA--SHRTYVDLKDKWKTLVHTA 588
>sp|O14139|HRP3_SCHPO Chromodomain helicase hrp3 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=hrp3 PE=1 SV=1
Length = 1388
Score = 36.2 bits (82), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 7 KWTAEEEEALRAGVAKHGTGKWKNIQRDPEF 37
+W E+ L +G+ KHG G W I+ DPE
Sbjct: 1122 QWGPREDSMLLSGICKHGFGAWLEIRDDPEL 1152
>sp|Q99284|H1S_SPHGR Histone H1, sperm (Fragments) OS=Sphaerechinus granularis PE=1 SV=1
Length = 91
Score = 36.2 bits (82), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 105 ESARSSAPKYNALIFEAISALKEPNGSDVSAILSYIEQRLEV-----PPNFRRLLSS 156
+S R +PK + +I AI+A++E GS V+ I SYI V P+ RR L S
Sbjct: 13 KSPRKGSPKKSPMIRAAITAMRERKGSSVAKIKSYIAANYRVNMTNLQPHIRRALRS 69
>sp|Q9SNB9|TRP2_ARATH Telomere repeat-binding protein 2 OS=Arabidopsis thaliana GN=TRP2
PE=1 SV=1
Length = 553
Score = 36.2 bits (82), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 10/60 (16%)
Query: 5 KQKWTAEEEEALRAGVAKHGTGKWKNIQ----RDPEFNPFLFSRSNIDLKDKWRNMSVSA 60
++ ++ E EAL V K GTG+W++++ D + R+ +DLKDKW+ + +A
Sbjct: 453 RRPFSVTEVEALVQAVEKLGTGRWRDVKVRAFEDADH------RTYVDLKDKWKTLVHTA 506
>sp|Q8L7L8|TRP1_ARATH Telomere repeat-binding protein 1 OS=Arabidopsis thaliana GN=TRP1
PE=1 SV=2
Length = 578
Score = 36.2 bits (82), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 8 WTAEEEEALRAGVAKHGTGKWKNIQRDPEFNPF--LFSRSNIDLKDKWRNMSVSA 60
++ E EAL V K GTG+W RD + F R+ +DLKDKW+ + +A
Sbjct: 471 FSVAEVEALVQAVEKLGTGRW----RDVKLCAFEDADHRTYVDLKDKWKTLVHTA 521
>sp|Q0IIJ2|H10_BOVIN Histone H1.0 OS=Bos taurus GN=H1F0 PE=2 SV=3
Length = 194
Score = 35.8 bits (81), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 83 TPQTSALPAAVPIDASADPITDESARSSAPKYNALIFEAISALKEPNGSDVSAILSYIEQ 142
T +++ PAA P A A + + PKY+ +I AI A K GS +I YI+
Sbjct: 2 TENSTSTPAAKPKRAKASKKSTDH-----PKYSDMIVAAIQAEKNRAGSSRQSIQKYIKS 56
Query: 143 RLEVPPNFRRLLSSRLRRLVAQEKLEKVQNC 173
+V N + ++RLV L++ +
Sbjct: 57 HYKVGENADSQIKLSIKRLVTTGVLKQTKGV 87
>sp|Q6NVM0|H10_XENTR Histone H1.0 OS=Xenopus tropicalis GN=h1f0 PE=2 SV=1
Length = 196
Score = 35.8 bits (81), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Query: 83 TPQTSALPAAVPIDASADP-ITDESARSSAPKYNALIFEAISALKEPNGSDVSAILSYIE 141
T ++A PA P + A TD PKY+ +I A+ A K +GS +I YI+
Sbjct: 2 TENSAAAPAGKPKRSKASKKATDH------PKYSDMILAAVQAEKSRSGSSRQSIQKYIK 55
Query: 142 QRLEVPPNFRRLLSSRLRRLVAQEKLEKVQNC 173
+V N + ++RLV L++ +
Sbjct: 56 NHYKVGENADSQIKLSIKRLVTSGTLKQTKGV 87
>sp|P10922|H10_MOUSE Histone H1.0 OS=Mus musculus GN=H1f0 PE=2 SV=4
Length = 194
Score = 35.8 bits (81), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 83 TPQTSALPAAVPIDASADPITDESARSSAPKYNALIFEAISALKEPNGSDVSAILSYIEQ 142
T +++ PAA P A A + + PKY+ +I AI A K GS +I YI+
Sbjct: 2 TENSTSAPAAKPKRAKASKKSTDH-----PKYSDMIVAAIQAEKNRAGSSRQSIQKYIKS 56
Query: 143 RLEVPPNFRRLLSSRLRRLVAQEKLEKVQNC 173
+V N + ++RLV L++ +
Sbjct: 57 HYKVGENADSQIKLSIKRLVTTGVLKQTKGV 87
>sp|P07305|H10_HUMAN Histone H1.0 OS=Homo sapiens GN=H1F0 PE=1 SV=3
Length = 194
Score = 35.8 bits (81), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 83 TPQTSALPAAVPIDASADPITDESARSSAPKYNALIFEAISALKEPNGSDVSAILSYIEQ 142
T +++ PAA P A A + + PKY+ +I AI A K GS +I YI+
Sbjct: 2 TENSTSAPAAKPKRAKASKKSTDH-----PKYSDMIVAAIQAEKNRAGSSRQSIQKYIKS 56
Query: 143 RLEVPPNFRRLLSSRLRRLVAQEKLEKVQNC 173
+V N + ++RLV L++ +
Sbjct: 57 HYKVGENADSQIKLSIKRLVTTGVLKQTKGV 87
>sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein Mi-2 homolog OS=Drosophila
melanogaster GN=Mi-2 PE=1 SV=2
Length = 1982
Score = 35.4 bits (80), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 2 GNPKQKWTAEEEEALRAGVAKHGTGKWKNIQRDPEF 37
G + W + L AG+ HG G+W++IQ D F
Sbjct: 1753 GREYEIWHRRHDYWLLAGIVTHGYGRWQDIQNDIRF 1788
>sp|P35060|H1_TIGCA Histone H1 OS=Tigriopus californicus PE=3 SV=1
Length = 181
Score = 35.4 bits (80), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 98 SADP--ITDESARSSAPKYNALIFEAISALKEPNGSDVSAILSYI--EQRLEVPPNFRRL 153
SA P ++ A+ + P + ++ AI ALKE NGS + AI YI +++V N
Sbjct: 6 SAKPKKVSKPKAKPTHPPTSVMVMAAIKALKERNGSSLPAIKKYIAANYKVDVVKN-AHF 64
Query: 154 LSSRLRRLVAQEKL 167
+ L+ LV ++KL
Sbjct: 65 IKKALKSLVEKKKL 78
>sp|P22845|H10A_XENLA Histone H1.0-A OS=Xenopus laevis GN=h1f0-a PE=2 SV=3
Length = 194
Score = 35.4 bits (80), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 112 PKYNALIFEAISALKEPNGSDVSAILSYIEQRLEVPPNFRRLLSSRLRRLVAQEKLEKVQ 171
PKY+ +I +A+ A K +GS +I YI+ V N + ++RLV L++ +
Sbjct: 24 PKYSDMILDAVQAEKSRSGSSRQSIQKYIKNNYTVGENADSQIKLSIKRLVTSGTLKQTK 83
Query: 172 NC 173
Sbjct: 84 GV 85
>sp|Q08759|MYB_XENLA Transcriptional activator Myb OS=Xenopus laevis GN=myb PE=2 SV=1
Length = 624
Score = 35.4 bits (80), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 6/50 (12%)
Query: 5 KQKWTAEEEEALRAGVAKHGTGKWKNIQRDPEFNPFLFSRSNIDLKDKWR 54
K +WT EE+E L+ V ++GT +WK I FL +R+++ + +W+
Sbjct: 37 KTRWTREEDEKLKKLVEQNGTEEWKVIA------SFLPNRTDVQCQHRWQ 80
>sp|Q6R0E3|TRP5_ARATH Telomere repeat-binding protein 5 OS=Arabidopsis thaliana GN=TRP5
PE=1 SV=2
Length = 630
Score = 35.4 bits (80), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 8 WTAEEEEALRAGVAKHGTGKWKNIQRDPEFNPFLFSRSNIDLKDKWRNMSVSA 60
++ E EAL V + GTG+W++++ N R+ +DLKDKW+ + +A
Sbjct: 531 FSVAEVEALVQAVERLGTGRWRDVKLRAFDNA--KHRTYVDLKDKWKTLVHTA 581
>sp|Q8I8V0|TAD2B_DROME Transcriptional adapter 2B OS=Drosophila melanogaster GN=Ada2b PE=1
SV=1
Length = 555
Score = 35.4 bits (80), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 62/153 (40%), Gaps = 26/153 (16%)
Query: 5 KQKWTAEEEEALRAGVAKHGTGKWKNIQRDPEFNPFLFSRSNIDLKDKWRNMSVSA---- 60
K WTA EE L + ++G G W++I + E ++S D K+++ N V+
Sbjct: 71 KGAWTAREEIRLLDAIEQYGFGNWEDISKHIE------TKSAEDAKEEYVNKFVNGTIGR 124
Query: 61 ----PREKSRTLKPKAGSDAPAVPLSTPQTSALPAAVPIDASAD--------PITDESAR 108
P + R D A PL T S LP P++ ++D P D R
Sbjct: 125 ATWTPAQSQRPRLIDHTGDDDAGPLGTNALSTLP---PLEINSDEAMQLGYMPNRDSFER 181
Query: 109 SSAPKYNALIFEAISALKEPNGSDVSAILSYIE 141
P LI IS E DV L++++
Sbjct: 182 EYDPTAEQLI-SNISLSSEDTEVDVMLKLAHVD 213
>sp|P22844|H10B_XENLA Histone H1.0-B OS=Xenopus laevis GN=h1f0-b PE=1 SV=1
Length = 196
Score = 35.0 bits (79), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Query: 86 TSALPAAVPIDASA-DPITDESARSSAPKYNALIFEAISALKEPNGSDVSAILSYIEQRL 144
++A PAA P + A TD PKY+ +I A+ A K +GS +I YI+
Sbjct: 5 SAATPAAKPKRSKALKKSTDH------PKYSDMILAAVQAEKSRSGSSRQSIQKYIKNHY 58
Query: 145 EVPPNFRRLLSSRLRRLVAQEKLEKVQNC 173
+V N + ++RLV L++ +
Sbjct: 59 KVGENADSQIKLSIKRLVTSGALKQTKGV 87
>sp|P06876|MYB_MOUSE Transcriptional activator Myb OS=Mus musculus GN=Myb PE=1 SV=2
Length = 636
Score = 35.0 bits (79), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Query: 5 KQKWTAEEEEALRAGVAKHGTGKWKNIQRDPEFNPFLFSRSNIDLKDKWRNM 56
K +WT EE+E L+ V ++GT WK I +L +R+++ + +W+ +
Sbjct: 40 KTRWTREEDEKLKKLVEQNGTDDWKVIAN------YLPNRTDVQCQHRWQKV 85
>sp|P01103|MYB_CHICK Transcriptional activator Myb OS=Gallus gallus GN=MYB PE=2 SV=1
Length = 641
Score = 35.0 bits (79), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Query: 5 KQKWTAEEEEALRAGVAKHGTGKWKNIQRDPEFNPFLFSRSNIDLKDKWR 54
K +WT EE+E L+ V ++GT WK I FL +R+++ + +W+
Sbjct: 40 KTRWTREEDEKLKKLVEQNGTEDWKVIAS------FLPNRTDVQCQHRWQ 83
>sp|P10242|MYB_HUMAN Transcriptional activator Myb OS=Homo sapiens GN=MYB PE=1 SV=2
Length = 640
Score = 35.0 bits (79), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Query: 5 KQKWTAEEEEALRAGVAKHGTGKWKNIQRDPEFNPFLFSRSNIDLKDKWRNM 56
K +WT EE+E L+ V ++GT WK I +L +R+++ + +W+ +
Sbjct: 40 KTRWTREEDEKLKKLVEQNGTDDWKVIAN------YLPNRTDVQCQHRWQKV 85
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.125 0.346
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,591,029
Number of Sequences: 539616
Number of extensions: 3904164
Number of successful extensions: 14212
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 137
Number of HSP's that attempted gapping in prelim test: 13998
Number of HSP's gapped (non-prelim): 306
length of query: 272
length of database: 191,569,459
effective HSP length: 116
effective length of query: 156
effective length of database: 128,974,003
effective search space: 20119944468
effective search space used: 20119944468
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 60 (27.7 bits)