Query 024084
Match_columns 272
No_of_seqs 391 out of 2446
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 17:56:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024084.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024084hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qup_A Superoxide dismutase 1 100.0 2.9E-39 9.9E-44 284.4 14.1 163 94-270 6-181 (222)
2 1jk9_B CCS, copper chaperone f 100.0 3.2E-38 1.1E-42 282.1 13.8 163 94-270 7-182 (249)
3 3pu7_A Superoxide dismutase [C 100.0 3.5E-29 1.2E-33 208.2 10.3 98 169-270 3-106 (154)
4 3f7l_A Copper,zinc superoxide 100.0 4.8E-29 1.7E-33 207.0 10.6 96 170-270 3-104 (152)
5 3kbe_A Superoxide dismutase [C 100.0 3.3E-29 1.1E-33 208.9 9.6 98 169-270 2-105 (157)
6 4a7u_A Superoxide dismutase [C 100.0 6.4E-29 2.2E-33 206.5 10.6 97 170-270 3-106 (153)
7 3l9y_A Cu-znsod1, superoxide d 100.0 7.2E-29 2.5E-33 206.4 9.9 99 168-270 2-106 (154)
8 2q2l_A Superoxide dismutase; S 100.0 1.2E-28 4.3E-33 204.5 10.0 98 169-270 2-105 (152)
9 1do5_A Human copper chaperone 100.0 1.4E-28 4.9E-33 204.5 10.1 99 168-270 3-107 (154)
10 1to4_A Superoxide dismutase; b 99.9 5E-28 1.7E-32 201.7 10.7 98 169-270 4-108 (156)
11 2e47_A EA4, TIME interVal meas 99.9 3.8E-28 1.3E-32 202.3 10.0 98 168-270 7-110 (156)
12 1f1g_A Cuznsod, copper-zinc su 99.9 5E-28 1.7E-32 201.3 10.6 98 169-270 2-107 (154)
13 2wyt_A Superoxide dismutase [C 99.9 5.1E-28 1.8E-32 201.0 10.4 97 170-270 3-106 (153)
14 3ce1_A Superoxide dismutase [C 99.9 1.3E-27 4.5E-32 201.2 10.4 99 168-270 4-110 (168)
15 1xso_A Copper,zinc superoxide 99.9 1.3E-27 4.5E-32 198.0 10.2 96 170-270 2-103 (150)
16 1ej8_A Lys7; beta barrel, copp 99.9 6.6E-28 2.2E-32 197.2 5.4 91 170-270 2-105 (140)
17 1oal_A Superoxide dismutase; o 99.9 9.2E-26 3.2E-30 187.0 9.6 89 177-270 12-114 (151)
18 1xtm_B Hypothetical superoxide 99.9 1.8E-25 6.3E-30 189.3 9.9 97 169-271 20-127 (175)
19 2aqm_A Superoxide dismutase [C 99.9 1.8E-25 6E-30 185.9 9.1 87 178-269 16-115 (154)
20 1eqw_A Cu,Zn superoxide dismut 99.9 4.3E-25 1.5E-29 184.0 9.6 87 178-269 16-116 (156)
21 2aqp_A Superoxide dismutase [C 99.9 4.6E-25 1.6E-29 185.1 9.5 87 178-269 25-125 (164)
22 1eso_A SOD, Cu, Zn superoxide 99.9 6.7E-25 2.3E-29 182.4 9.9 86 179-269 17-115 (154)
23 1z9n_A Superoxide dismutase [C 99.9 1.5E-24 5.1E-29 183.9 10.8 87 178-269 38-138 (177)
24 2jlp_A Extracellular superoxid 99.9 1.1E-24 3.7E-29 190.2 10.1 89 169-260 41-142 (222)
25 1pzs_A Superoxide dismutase [C 99.9 5.8E-24 2E-28 184.4 11.0 97 168-270 37-149 (208)
26 3iwl_A Copper transport protei 99.4 1.5E-12 5.2E-17 92.1 8.1 65 95-160 3-67 (68)
27 4a4j_A Pacszia, cation-transpo 99.3 6.8E-12 2.3E-16 88.1 9.3 65 94-158 2-69 (69)
28 3dxs_X Copper-transporting ATP 99.3 9E-12 3.1E-16 88.8 8.9 66 94-159 2-71 (74)
29 3fry_A Probable copper-exporti 99.3 8.1E-12 2.8E-16 89.4 7.6 65 94-160 5-70 (73)
30 2crl_A Copper chaperone for su 99.2 1.4E-10 4.7E-15 88.4 11.4 74 91-164 16-89 (98)
31 1cc8_A Protein (metallochapero 99.2 1.1E-10 3.7E-15 83.1 9.8 65 94-158 5-70 (73)
32 2xmm_A SSR2857 protein, ATX1; 99.1 7.8E-11 2.7E-15 80.2 6.4 61 95-155 2-63 (64)
33 1aw0_A Menkes copper-transport 99.1 2E-10 6.7E-15 80.1 8.1 64 94-157 3-70 (72)
34 2roe_A Heavy metal binding pro 99.1 6.8E-11 2.3E-15 82.0 5.6 62 97-158 3-65 (66)
35 2xmw_A PACS-N, cation-transpor 99.1 4.4E-10 1.5E-14 78.0 9.4 64 95-158 4-70 (71)
36 1osd_A MERP, hypothetical prot 99.1 4.1E-10 1.4E-14 78.5 9.2 65 94-158 3-71 (72)
37 2k2p_A Uncharacterized protein 99.1 1.1E-10 3.8E-15 86.6 6.4 62 94-155 22-84 (85)
38 1mwy_A ZNTA; open-faced beta-s 99.1 5.1E-10 1.8E-14 78.8 9.4 65 94-158 3-69 (73)
39 3cjk_B Copper-transporting ATP 99.1 6E-10 2E-14 78.7 9.7 65 95-159 3-71 (75)
40 1q8l_A Copper-transporting ATP 99.1 4.2E-10 1.4E-14 82.1 8.9 68 94-161 9-80 (84)
41 2kt2_A Mercuric reductase; nme 99.1 2.7E-10 9.1E-15 79.1 7.2 62 97-158 3-67 (69)
42 2l3m_A Copper-ION-binding prot 99.1 6.7E-10 2.3E-14 77.3 9.1 62 94-155 5-70 (71)
43 1cpz_A Protein (COPZ); copper 99.1 5E-10 1.7E-14 77.0 8.3 61 97-157 3-67 (68)
44 1kvi_A Copper-transporting ATP 99.1 4.7E-10 1.6E-14 80.1 8.3 67 93-159 7-77 (79)
45 2g9o_A Copper-transporting ATP 99.1 7.2E-10 2.5E-14 82.5 9.1 68 94-161 3-77 (90)
46 1yg0_A COP associated protein; 99.1 5.8E-10 2E-14 76.2 7.9 61 95-155 2-65 (66)
47 1yjr_A Copper-transporting ATP 99.0 6E-10 2.1E-14 78.2 8.0 64 95-158 5-72 (75)
48 1fvq_A Copper-transporting ATP 99.0 8.2E-10 2.8E-14 76.9 8.1 65 95-159 3-70 (72)
49 2ldi_A Zinc-transporting ATPas 99.0 8.6E-10 2.9E-14 76.0 7.9 63 94-156 3-69 (71)
50 1opz_A Potential copper-transp 99.0 1.4E-09 4.6E-14 76.3 8.9 65 94-158 6-74 (76)
51 2qif_A Copper chaperone COPZ; 99.0 1.8E-09 6.1E-14 73.6 9.3 61 95-155 3-67 (69)
52 2kyz_A Heavy metal binding pro 99.0 4.4E-10 1.5E-14 78.1 6.2 62 95-158 2-64 (67)
53 2kkh_A Putative heavy metal tr 99.0 2.6E-09 8.8E-14 79.8 10.0 72 93-164 15-90 (95)
54 1y3j_A Copper-transporting ATP 99.0 7.5E-10 2.6E-14 78.8 6.5 65 95-159 4-72 (77)
55 2ofg_X Zinc-transporting ATPas 98.9 4.4E-09 1.5E-13 81.4 9.1 64 94-157 8-75 (111)
56 1jww_A Potential copper-transp 98.9 3.2E-09 1.1E-13 75.5 7.7 65 95-159 4-72 (80)
57 2ew9_A Copper-transporting ATP 98.9 3.2E-09 1.1E-13 84.8 8.0 63 95-157 81-147 (149)
58 1p6t_A Potential copper-transp 98.9 4.6E-09 1.6E-13 84.3 8.4 67 94-160 74-144 (151)
59 2aj0_A Probable cadmium-transp 98.8 9.3E-09 3.2E-13 72.0 7.2 61 95-159 4-65 (71)
60 2rop_A Copper-transporting ATP 98.8 1.7E-08 5.7E-13 85.7 9.1 67 94-160 122-192 (202)
61 2ew9_A Copper-transporting ATP 98.7 2.9E-08 1E-12 79.0 8.3 66 93-158 3-72 (149)
62 3j09_A COPA, copper-exporting 98.4 5E-07 1.7E-11 91.3 8.5 64 95-158 3-70 (723)
63 1p6t_A Potential copper-transp 98.4 1E-06 3.5E-11 70.3 8.6 62 94-155 6-71 (151)
64 2rop_A Copper-transporting ATP 98.4 7.4E-07 2.5E-11 75.4 7.5 63 94-156 20-89 (202)
65 3lvj_C Sulfurtransferase TUSA; 74.6 9.5 0.00032 27.0 6.5 56 95-159 10-68 (82)
66 1jdq_A TM006 protein, hypothet 68.2 13 0.00046 27.4 6.2 55 96-159 27-84 (98)
67 3bpd_A Uncharacterized protein 63.5 11 0.00037 28.2 4.7 61 95-156 8-77 (100)
68 3cq1_A Putative uncharacterize 62.5 11 0.00037 27.9 4.7 35 96-130 43-83 (103)
69 2x3d_A SSO6206; unknown functi 60.3 17 0.0006 26.9 5.3 63 94-157 5-77 (96)
70 3hz7_A Uncharacterized protein 60.1 11 0.00039 27.1 4.3 54 97-159 3-60 (87)
71 1je3_A EC005, hypothetical 8.6 58.1 18 0.00063 26.6 5.3 54 96-158 28-84 (97)
72 2raq_A Conserved protein MTH88 56.9 18 0.00062 26.9 4.9 63 94-157 7-78 (97)
73 1uwd_A Hypothetical protein TM 55.1 16 0.00056 26.8 4.6 35 96-130 44-84 (103)
74 2j89_A Methionine sulfoxide re 48.3 73 0.0025 27.8 8.2 46 105-150 101-168 (261)
75 3lno_A Putative uncharacterize 42.8 20 0.00069 26.7 3.4 35 96-130 46-87 (108)
76 1pav_A Hypothetical protein TA 38.2 15 0.00051 25.5 1.9 52 97-157 8-62 (78)
77 4gwb_A Peptide methionine sulf 35.6 66 0.0023 26.2 5.6 47 105-151 9-73 (168)
78 2w7v_A General secretion pathw 35.0 1.2E+02 0.0042 22.2 6.5 66 110-189 16-87 (95)
79 1nwa_A Peptide methionine sulf 27.8 1.1E+02 0.0036 25.8 5.7 46 105-150 32-95 (203)
80 1ff3_A Peptide methionine sulf 27.0 93 0.0032 26.3 5.3 46 105-150 49-116 (211)
81 1fvg_A Peptide methionine sulf 26.5 2.8E+02 0.0095 23.1 9.6 46 105-150 50-117 (199)
82 2jsx_A Protein NAPD; TAT, proo 24.2 2E+02 0.007 20.7 6.4 46 105-150 16-62 (95)
83 1owx_A Lupus LA protein, SS-B, 23.9 1.8E+02 0.006 22.1 6.0 56 96-151 19-76 (121)
84 3bqh_A PILB, peptide methionin 21.0 1.8E+02 0.0061 24.1 5.8 47 105-151 9-77 (193)
No 1
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=100.00 E-value=2.9e-39 Score=284.44 Aligned_cols=163 Identities=28% Similarity=0.394 Sum_probs=146.4
Q ss_pred eEEEEEecCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeCCChhhhHHHHHhccccceeecCCCccchhhcceee
Q 024084 94 LLTEYMVDMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGSSPLKTMTEALEQTGRKARLVGQGVPEDFLVSAAVA 173 (272)
Q Consensus 94 ~~v~~~VGM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~~~~~~I~~aI~~~Gy~a~~~~~g~~~~~~~~~AvA 173 (272)
.+++|.|.|+|.+|+.+|+++|++++||.+++||+..++++|.....+++|.++|+++||++.++..+.++ .+|+|
T Consensus 6 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aI~~~Gy~a~~~~~~~~~----~~av~ 81 (222)
T 1qup_A 6 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAGKPN----SSAVA 81 (222)
T ss_dssp EEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCCCEEECCSCTT----CEEEE
T ss_pred eEEEEEEccccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEeccCCHHHHHHHHHHcCCccccccCCCcc----ceeeE
Confidence 35678888999999999999999999999999999999999998888999999999999999998887765 57999
Q ss_pred eecCC-----------eeeeEEEEeeecCcceEEEEEecCCC-CCccceeecccCCCCCCCcccCCCcCCCCCCCCCCCC
Q 024084 174 EFKGP-----------DVFGVVRLAQVNMELARIEANFSGLS-PGKHGWSINEFGDLTKGAVSTGRVYNPKIEGSAKEAV 241 (272)
Q Consensus 174 ~lkg~-----------~v~G~v~f~q~~~~~~~v~~~~~GL~-~G~hg~HIHe~Gd~~~g~~saG~h~np~~~~h~~~h~ 241 (272)
+|++. ++.|+|+|.|..+++++|+++|+||+ ||+|||||||+|||++||.|+|+||||++++|
T Consensus 82 ~l~~~~~~~~~~~~~~~v~G~v~~~q~~~~~~~v~~~i~GL~~~g~hg~hiHe~Gd~~~g~~saG~h~np~~~~h----- 156 (222)
T 1qup_A 82 ILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVNGVPEAGNYHASIHEKGDVSKGVESTGKVWHKFDEPI----- 156 (222)
T ss_dssp EEECCSCCSSCCCCSCCEEEEEEEEECSSSCEEEEEEEEEESSCEEEEEEEESCCCCTTGGGGGCSEEEECCSCE-----
T ss_pred EeccccccccccccCCCceEEEEEEEecCCCEEEEEEEeCCCCCCcEeEEEcCCCCCCCCcccccCCcCCCCCcc-----
Confidence 99763 58999999997556799999999999 99999999999999999999999999999876
Q ss_pred CCcCceEeecC-CceEecceeeeeecCcee
Q 024084 242 LSLVYIFPMIL-QWHFLTGLLDFISHLVTW 270 (272)
Q Consensus 242 GDLgni~~~~~-~G~~~~~~~~~~~~~~~~ 270 (272)
||||||++ ++ ||.+. + ++...++|
T Consensus 157 GDlgni~~-~~~~G~a~---~-~~~~~~~l 181 (222)
T 1qup_A 157 ECFNESDL-GKNLYSGK---T-FLSAPLPT 181 (222)
T ss_dssp EECEEETT-EEEEEEEE---E-EEEESCCH
T ss_pred CccCCEEe-cCCCcEEE---E-EECCCcCc
Confidence 99999999 88 99974 3 55555554
No 2
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=100.00 E-value=3.2e-38 Score=282.06 Aligned_cols=163 Identities=28% Similarity=0.402 Sum_probs=145.8
Q ss_pred eEEEEEecCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeCCChhhhHHHHHhccccceeecCCCccchhhcceee
Q 024084 94 LLTEYMVDMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGSSPLKTMTEALEQTGRKARLVGQGVPEDFLVSAAVA 173 (272)
Q Consensus 94 ~~v~~~VGM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~~~~~~I~~aI~~~Gy~a~~~~~g~~~~~~~~~AvA 173 (272)
.+++|.|.|+|.+|+.+|+++|++++||..++||+..++++|.....+++|.++|+++||++.+...+.++ .+|+|
T Consensus 7 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aIe~~Gy~a~~~~~~~~~----~~Av~ 82 (249)
T 1jk9_B 7 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAGKPN----SSAVA 82 (249)
T ss_dssp EEEEEECCCCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHTTTCCCEEEEESSTT----SEEEE
T ss_pred eeEEEEEeeccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecCCCHHHHHHHHHHhCCCcccccCCccc----ceeEE
Confidence 35678888999999999999999999999999999999999998888999999999999999998877665 57899
Q ss_pred eecC-----------CeeeeEEEEeeecCcceEEEEEecCCC-CCccceeecccCCCCCCCcccCCCcCCCCCCCCCCCC
Q 024084 174 EFKG-----------PDVFGVVRLAQVNMELARIEANFSGLS-PGKHGWSINEFGDLTKGAVSTGRVYNPKIEGSAKEAV 241 (272)
Q Consensus 174 ~lkg-----------~~v~G~v~f~q~~~~~~~v~~~~~GL~-~G~hg~HIHe~Gd~~~g~~saG~h~np~~~~h~~~h~ 241 (272)
+|++ +++.|+|+|.|..++.++|+++|+||+ ||.|||||||+|||++||.|||+||||++++|
T Consensus 83 ~l~~~~~~~~~~~~~~~v~G~v~f~q~~~~~~~v~~~~~GL~~~g~hg~hiHe~Gd~~~g~~saG~h~np~~~~h----- 157 (249)
T 1jk9_B 83 ILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVNGVPEAGNYHASIHEKGDVSKGVESTGKVWHKFDEPI----- 157 (249)
T ss_dssp EEEESSCCTTSCTTCCSEEEEEEEEEEETTEEEEEEEEEEESSCEEEEEEEESCCCCTTGGGGGCSEEEECCSCE-----
T ss_pred EeccccccccccccCCCcEEEEEEEEcCCCCEEEEEEEeCCCCCCcEeEEEEeCCCCCCCcccccCCcCCCCCCc-----
Confidence 9875 358999999997556799999999999 99999999999999999999999999999876
Q ss_pred CCcCceEeecC-CceEecceeeeeecCcee
Q 024084 242 LSLVYIFPMIL-QWHFLTGLLDFISHLVTW 270 (272)
Q Consensus 242 GDLgni~~~~~-~G~~~~~~~~~~~~~~~~ 270 (272)
||||||++ +. ||.+. + ++...++|
T Consensus 158 GDlgni~~-~~~~G~a~---~-~~~~~~~l 182 (249)
T 1jk9_B 158 ECFNESDL-GKNLYSGK---T-FLSAPLPT 182 (249)
T ss_dssp EECEECSS-CTTCEEEE---E-EEEESCCH
T ss_pred cccCCEEe-cCCCceEE---E-EECCCCCc
Confidence 99999999 99 99974 3 56665554
No 3
>3pu7_A Superoxide dismutase [CU-ZN], chloroplastic; oxidoreductase, antioxidant, metal-binding, DIS bond, transit peptide; 1.80A {Solanum lycopersicum} PDB: 3km1_A 3km2_A 3mkg_A 3hog_A 3s0p_A 1srd_A
Probab=99.96 E-value=3.5e-29 Score=208.20 Aligned_cols=98 Identities=30% Similarity=0.433 Sum_probs=88.8
Q ss_pred cceeeeecCC-eeeeEEEEeeecCcceEEEEEecCCCCCccceeecccCCCCCCCcccCCCcCCCCCCC-----CCCCCC
Q 024084 169 SAAVAEFKGP-DVFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNPKIEGS-----AKEAVL 242 (272)
Q Consensus 169 ~~AvA~lkg~-~v~G~v~f~q~~~~~~~v~~~~~GL~~G~hg~HIHe~Gd~~~g~~saG~h~np~~~~h-----~~~h~G 242 (272)
.+|+|+|++. +|+|+|+|+|..++.++|+++|+||+||+|||||||+|||++||.|+|+||||+++.| ..+|.|
T Consensus 3 ~~Avavl~g~~~V~G~v~f~q~~~g~v~v~~~i~GL~pG~hgfHIHe~Gd~s~gc~SaGgHfnP~~~~Hg~p~~~~~h~G 82 (154)
T 3pu7_A 3 KKAVAVLKGNSNVEGVVTLSQDDDGPTTVNVRITGLAPGLHGFHLHEYGDTTNGCMSTGAHFNPNKLTHGAPGDEIRHAG 82 (154)
T ss_dssp EEEEEEEBCSSSCEEEEEEEEETTSCEEEEEEEESCCSEEEEEEEESCCCCTTGGGGGCSBCCTTCCCCCCTTCSSCCTT
T ss_pred ceEEEEECCCCCCEEEEEEEEeCCCcEEEEEEEECCCCCcccEEEeecCCCCCCccccccccCCccCcCCCCCccCCcCC
Confidence 5789999986 6999999999986679999999999999999999999999999999999999999999 368999
Q ss_pred CcCceEeecCCceEecceeeeeecCcee
Q 024084 243 SLVYIFPMILQWHFLTGLLDFISHLVTW 270 (272)
Q Consensus 243 DLgni~~~~~~G~~~~~~~~~~~~~~~~ 270 (272)
|||||++ +.+|.+ .++++...++|
T Consensus 83 DLgni~~-~~~G~a---~~~~~d~~l~L 106 (154)
T 3pu7_A 83 DLGNIVA-NADGVA---EVTLVDNQIPL 106 (154)
T ss_dssp EEEEEEE-CTTSCE---EEEEEESSCCS
T ss_pred cccCEEe-CCCCcE---EEEEEeCCeee
Confidence 9999999 999987 46666777765
No 4
>3f7l_A Copper,zinc superoxide dismutase; oxidoreductase (superoxide acceptor), greek KEY beta-barrel, amyloid filaments, ALS, FALS; 0.99A {Alvinella pompejana} SCOP: b.1.8.1 PDB: 3f7k_A
Probab=99.96 E-value=4.8e-29 Score=207.00 Aligned_cols=96 Identities=28% Similarity=0.478 Sum_probs=87.2
Q ss_pred ceeeeecCC-eeeeEEEEeeecCcceEEEEEecCCCCCccceeecccCCCCCCCcccCCCcCCCCCCC-----CCCCCCC
Q 024084 170 AAVAEFKGP-DVFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNPKIEGS-----AKEAVLS 243 (272)
Q Consensus 170 ~AvA~lkg~-~v~G~v~f~q~~~~~~~v~~~~~GL~~G~hg~HIHe~Gd~~~g~~saG~h~np~~~~h-----~~~h~GD 243 (272)
+|+|+|++. +|.|+|+|+|. ++.++|+++|+||+||+|||||||+|||++||.|||+||||+++.| ..||.||
T Consensus 3 ~Avavl~g~~~v~G~v~f~q~-~~~v~v~~~l~GL~pG~hgfHIHe~Gd~s~gc~SaGgHfnP~~~~Hg~p~~~~~H~GD 81 (152)
T 3f7l_A 3 HAVCVLKGDSPVTGTIHLKEE-GDMVTVTGEITGLTPGKHGFHVHEFGDNTNGCTSAGGHFNPHGKEHGAPEDENRHAGD 81 (152)
T ss_dssp EEEEEEBCSSSCEEEEEEEEE-TTEEEEEEEEESCCSEEEEEEEESCCCCTTTTGGGCSBCCTTCCCCCCTTCSSSCTTE
T ss_pred EEEEEEcCCCCcEEEEEEEEc-CCcEEEEEEEECCCCCcccEEEeecCcCCCCcccccccccccCCcCCCCCCCCCcccc
Confidence 689999986 69999999999 4679999999999999999999999999999999999999999999 3689999
Q ss_pred cCceEeecCCceEecceeeeeecCcee
Q 024084 244 LVYIFPMILQWHFLTGLLDFISHLVTW 270 (272)
Q Consensus 244 Lgni~~~~~~G~~~~~~~~~~~~~~~~ 270 (272)
||||++ +.+|.+ .++++...++|
T Consensus 82 Lgni~~-~~~G~a---~~~~~d~~i~L 104 (152)
T 3f7l_A 82 LGNVVA-GEDGKA---VINMKDKLVKL 104 (152)
T ss_dssp EEEEEE-CTTSCE---EEEEEESSCBS
T ss_pred ccCeEE-CCCCeE---EEEEECcceec
Confidence 999999 999997 46666677665
No 5
>3kbe_A Superoxide dismutase [CU-ZN]; Cu-Zn superoxide dismutase, antioxidant, oxidoreductase, NEM disulfide bond, metal-binding; 1.10A {Caenorhabditis elegans} SCOP: b.1.8.1 PDB: 3kbf_A
Probab=99.96 E-value=3.3e-29 Score=208.93 Aligned_cols=98 Identities=30% Similarity=0.428 Sum_probs=88.5
Q ss_pred cceeeeecCCeeeeEEEEeeecC-cceEEEEEecCCCCCccceeecccCCCCCCCcccCCCcCCCCCCC-----CCCCCC
Q 024084 169 SAAVAEFKGPDVFGVVRLAQVNM-ELARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNPKIEGS-----AKEAVL 242 (272)
Q Consensus 169 ~~AvA~lkg~~v~G~v~f~q~~~-~~~~v~~~~~GL~~G~hg~HIHe~Gd~~~g~~saG~h~np~~~~h-----~~~h~G 242 (272)
.+|+|+|+|..|+|+|+|+|..+ +.++|+++|+||+||+|||||||+|||++||.|||+||||+++.| ..||.|
T Consensus 2 ~~Avavl~g~~V~G~v~f~q~~~g~~v~v~~~l~GL~pG~hgfHIHe~Gd~s~gc~SaGgHfnP~~~~Hg~p~~~~~h~G 81 (157)
T 3kbe_A 2 NRAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISAGPHFNPFGKTHGGPKSEIRHVG 81 (157)
T ss_dssp CEEEEEEBCSSCEEEEEEECSSTTSCCEEEEEEESCCSSCEEEEEESCCCCTTTTGGGCSBCCTTCCCSSSGGGGSCCTT
T ss_pred eEEEEEEeCCCEEEEEEEEEeCCCCeEEEEEEEECCCCCcccEEEeecCccCcccccccccccccCCcCCCCCcCCCccC
Confidence 47899999988999999999874 469999999999999999999999999999999999999999999 368999
Q ss_pred CcCceEeecCCceEecceeeeeecCcee
Q 024084 243 SLVYIFPMILQWHFLTGLLDFISHLVTW 270 (272)
Q Consensus 243 DLgni~~~~~~G~~~~~~~~~~~~~~~~ 270 (272)
|||||++ +.+|.+ .++++...++|
T Consensus 82 DLgni~~-~~~G~a---~~~~~d~~i~L 105 (157)
T 3kbe_A 82 DLGNVEA-GADGVA---KIKLTDTLVTL 105 (157)
T ss_dssp EEEEECC-CTTSEE---EEEECSCCCCS
T ss_pred cccCEEe-CCCCeE---EEEEEecceee
Confidence 9999999 999997 46666666665
No 6
>4a7u_A Superoxide dismutase [CU-ZN]; oxidoreductase, amyotrophic lateral sclerosis, antioxidant, mutation, metal-binding, Zn superoxide dismutase; HET: ALE; 0.98A {Homo sapiens} PDB: 3ecv_A 1uxl_A* 4a7g_F* 4a7q_A* 4a7t_A* 4a7s_A* 4a7v_A* 4b3e_A 4a7g_A* 1hl4_A 1spd_A 2c9v_A* 1hl5_A 1pu0_A 2c9u_A 2c9s_A* 2v0a_A* 3ecu_A 3kh3_A 3kh4_A ...
Probab=99.96 E-value=6.4e-29 Score=206.53 Aligned_cols=97 Identities=25% Similarity=0.361 Sum_probs=87.7
Q ss_pred ceeeeecCC-eeeeEEEEeeecC-cceEEEEEecCCCCCccceeecccCCCCCCCcccCCCcCCCCCCC-----CCCCCC
Q 024084 170 AAVAEFKGP-DVFGVVRLAQVNM-ELARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNPKIEGS-----AKEAVL 242 (272)
Q Consensus 170 ~AvA~lkg~-~v~G~v~f~q~~~-~~~~v~~~~~GL~~G~hg~HIHe~Gd~~~g~~saG~h~np~~~~h-----~~~h~G 242 (272)
+|||+|+|. +|+|+|+|+|..+ +.++|+++|+||+||+|||||||+|||++||.|||+||||+++.| ..+|.|
T Consensus 3 ~Avavl~g~~~v~G~v~f~q~~~~~~v~v~~~i~GL~pG~hg~HIHe~Gd~s~gc~SaGgHfnP~~~~Hg~p~~~~~h~G 82 (153)
T 4a7u_A 3 KAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVG 82 (153)
T ss_dssp EEEEEEBCSSSCEEEEEEEESSTTCCEEEEEEEESCCSEEEEEEEESCCCCTTSGGGGCSBCCTTCCCCCCTTCSSCCTT
T ss_pred EEEEEEcCCCccEEEEEEEEeCCCCcEEEEEEEECCCCCcccEEEeecCccccccccccCeecccCCcCCCCCcCCCccC
Confidence 689999986 6999999999875 579999999999999999999999999999999999999999998 358999
Q ss_pred CcCceEeecCCceEecceeeeeecCcee
Q 024084 243 SLVYIFPMILQWHFLTGLLDFISHLVTW 270 (272)
Q Consensus 243 DLgni~~~~~~G~~~~~~~~~~~~~~~~ 270 (272)
|||||++ +.+|.+ .++++...++|
T Consensus 83 DLgni~~-~~~G~a---~~~~~d~~isL 106 (153)
T 4a7u_A 83 DLGNVTA-DKDGVA---DVSIEDSVISL 106 (153)
T ss_dssp EEEEEEE-CTTSCE---EEEEEESSCBS
T ss_pred cccCeEe-CCCceE---EEEEEcCceEe
Confidence 9999999 999997 46666677766
No 7
>3l9y_A Cu-znsod1, superoxide dismutase [CU-ZN]; greek-KEY-barrel, antioxidant, copper, cytoplasm, metal- binding, oxidoreductase; 1.80A {Bombyx mori} SCOP: b.1.8.1 PDB: 3l9e_A
Probab=99.95 E-value=7.2e-29 Score=206.44 Aligned_cols=99 Identities=27% Similarity=0.369 Sum_probs=88.4
Q ss_pred hcceeeeecCCeeeeEEEEeeecC-cceEEEEEecCCCCCccceeecccCCCCCCCcccCCCcCCCCCCC-----CCCCC
Q 024084 168 VSAAVAEFKGPDVFGVVRLAQVNM-ELARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNPKIEGS-----AKEAV 241 (272)
Q Consensus 168 ~~~AvA~lkg~~v~G~v~f~q~~~-~~~~v~~~~~GL~~G~hg~HIHe~Gd~~~g~~saG~h~np~~~~h-----~~~h~ 241 (272)
+.+|+|+|+|+ ++|+|+|+|..+ +.++|+++|+||+||+|||||||+|||++||.|||+||||+++.| ..||.
T Consensus 2 ~~~Ava~l~G~-v~G~v~f~q~~~~~~v~v~~~l~GL~pG~hg~HIHe~Gd~s~gc~SaGgHfnP~~~~Hg~p~~~~~h~ 80 (154)
T 3l9y_A 2 PAKAVCVLRGD-VSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPSSAVRHV 80 (154)
T ss_dssp CEEEEEEEEES-SEEEEEEEESSTTSCEEEEEEEESCCSEEEEEEEESCCCCTTGGGGGCSBCCTTCCCCCCTTCSSCCT
T ss_pred CeEEEEEEcCC-CEEEEEEEEeCCCCcEEEEEEEECCCCCCccEEEEecCcCCCCcccccccccccCCcCCCCCcccccc
Confidence 46899999996 999999999873 579999999999999999999999999999999999999999998 36899
Q ss_pred CCcCceEeecCCceEecceeeeeecCcee
Q 024084 242 LSLVYIFPMILQWHFLTGLLDFISHLVTW 270 (272)
Q Consensus 242 GDLgni~~~~~~G~~~~~~~~~~~~~~~~ 270 (272)
||||||++.+++|.+ .++++...++|
T Consensus 81 GDLgni~~~~~~G~a---~~~~~d~~~sL 106 (154)
T 3l9y_A 81 GDLGNIEAIEDAGVT---KVSIQDSQISL 106 (154)
T ss_dssp TEEEEEEESSTTSEE---EEEEEESSCBS
T ss_pred cccCCEEEeCCCCeE---EEEEEcCceEe
Confidence 999999986788987 46666676666
No 8
>2q2l_A Superoxide dismutase; SOD, SAD, antioxidant, oxidoreductase, metal-binding; 2.37A {Potentilla atrosanguinea}
Probab=99.95 E-value=1.2e-28 Score=204.52 Aligned_cols=98 Identities=24% Similarity=0.342 Sum_probs=87.4
Q ss_pred cceeeeecCC-eeeeEEEEeeecCcceEEEEEecCCCCCccceeecccCCCCCCCcccCCCcCCCCCCC-----CCCCCC
Q 024084 169 SAAVAEFKGP-DVFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNPKIEGS-----AKEAVL 242 (272)
Q Consensus 169 ~~AvA~lkg~-~v~G~v~f~q~~~~~~~v~~~~~GL~~G~hg~HIHe~Gd~~~g~~saG~h~np~~~~h-----~~~h~G 242 (272)
.+|+|+|++. +++|+|+|+|..++.++|+++|+||+||+|||||||+|||+++|.|+|+||||+++.| ..||.|
T Consensus 2 ~~Ava~l~g~~~v~G~v~f~q~~~g~v~v~~~i~GL~pG~hg~HIHe~Gd~~~gc~SaG~HfnP~~~~hg~p~~~~~h~G 81 (152)
T 2q2l_A 2 AKGVAVLSSSEGVAGTILFTQEGDGPTTVTGNISGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGSPEDETRHAG 81 (152)
T ss_dssp EEEEEECBCSSSCEEEEEEEESTTSCEEEEEEEESCCSEEEEEEEESCCCCTTGGGGGCSBCCTTCCCCCCTTSSSCCTT
T ss_pred ceEEEEEeCCCccEEEEEEEEcCCCcEEEEEEECCCCCcceeEEEeecCccCCCcccccCccCCCCCCCCCCCcCCCcCC
Confidence 4689999875 6999999999766569999999999999999999999999999999999999999999 479999
Q ss_pred CcCceEeecCCceEecceeeeeecCcee
Q 024084 243 SLVYIFPMILQWHFLTGLLDFISHLVTW 270 (272)
Q Consensus 243 DLgni~~~~~~G~~~~~~~~~~~~~~~~ 270 (272)
|||||++ +.+|.+ .++++...++|
T Consensus 82 DLgni~~-~~~G~a---~~~~~d~~i~l 105 (152)
T 2q2l_A 82 DLGNITV-GDDGTA---CFTIVDKQIPL 105 (152)
T ss_dssp EEEEEEE-CTTSCE---EEEEEESSCCS
T ss_pred cccCeEE-CCCCcE---EEEEEccceec
Confidence 9999999 999997 45666666665
No 9
>1do5_A Human copper chaperone for superoxide dismutase domain II; beta-barrel; 2.75A {Homo sapiens} SCOP: b.1.8.1
Probab=99.95 E-value=1.4e-28 Score=204.49 Aligned_cols=99 Identities=30% Similarity=0.427 Sum_probs=88.2
Q ss_pred hcceeeeecCC-eeeeEEEEeeecCcceEEEEEecCCCCCccceeecccCCCCCCCcccCCCcCCCCCCC-----CCCCC
Q 024084 168 VSAAVAEFKGP-DVFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNPKIEGS-----AKEAV 241 (272)
Q Consensus 168 ~~~AvA~lkg~-~v~G~v~f~q~~~~~~~v~~~~~GL~~G~hg~HIHe~Gd~~~g~~saG~h~np~~~~h-----~~~h~ 241 (272)
+.+|+|++++. .++|+|+|+|..++.++|+++|+||+||.|||||||+|||+++|.|+|+||||++++| ..||.
T Consensus 3 ~~~ava~l~~~~~v~G~v~f~q~~~~~v~v~~~i~GL~pG~hg~HIHe~Gd~s~~c~SaG~HfnP~~~~hg~p~~~~~h~ 82 (154)
T 1do5_A 3 LGAAVAILGGPGTVQGVVRFLQLTPERCLIEGTIDGLEPGLHGLHVHQYGDLTNNCNSCGNHFNPDGASHGGPQDSDRHR 82 (154)
T ss_dssp CEEEEEEEBCSSSCEEEEEEEEEETTEEEEEEEEESCCSEEEEEEEESCCCCTTGGGTTCSBCCTTCCCCCCTTCSSSCT
T ss_pred cceEEEEEcCCCCcEEEEEEEEecCCCEEEEEEEECCCCCceeEEEeecCCCCCCcccCcCccCCCCCCCCCCCcccCcc
Confidence 35789999986 5999999999655679999999999999999999999999999999999999999999 47899
Q ss_pred CCcCceEeecCCceEecceeeeeecCcee
Q 024084 242 LSLVYIFPMILQWHFLTGLLDFISHLVTW 270 (272)
Q Consensus 242 GDLgni~~~~~~G~~~~~~~~~~~~~~~~ 270 (272)
||||||++ +.+|.+ .++++...++|
T Consensus 83 GDLgni~~-~~~G~a---~~~~~d~~~~l 107 (154)
T 1do5_A 83 GDLGNVRA-DADGRA---IFRMEDEQLKV 107 (154)
T ss_dssp TEEEEEEE-CTTSEE---EEEEEESSCCH
T ss_pred ccccCeEe-cCCceE---EEEEEcccccc
Confidence 99999999 999997 45666666665
No 10
>1to4_A Superoxide dismutase; beta-barrel, oxidoreductase; 1.55A {Schistosoma mansoni} SCOP: b.1.8.1 PDB: 1to5_A 3mnd_A
Probab=99.95 E-value=5e-28 Score=201.69 Aligned_cols=98 Identities=31% Similarity=0.470 Sum_probs=86.8
Q ss_pred cceeeeecCC-eeeeEEEEeeec-CcceEEEEEecCCCCCccceeecccCCCCCCCcccCCCcCCCCCCC-----CCCCC
Q 024084 169 SAAVAEFKGP-DVFGVVRLAQVN-MELARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNPKIEGS-----AKEAV 241 (272)
Q Consensus 169 ~~AvA~lkg~-~v~G~v~f~q~~-~~~~~v~~~~~GL~~G~hg~HIHe~Gd~~~g~~saG~h~np~~~~h-----~~~h~ 241 (272)
.+|+|+|++. +++|+|+|+|.. .+.++|+++|+||+||+|||||||+|||++||.|+|+||||++++| ..||.
T Consensus 4 ~~Ava~l~~~~~v~G~v~f~q~~~~~~v~v~~~l~GL~pG~hg~HIHe~Gd~s~gc~SaG~HfnP~~~~hg~p~~~~~h~ 83 (156)
T 1to4_A 4 MKAVCVMTGTAGVKGVVKFTQETDNGPVHVHAEFSGLKAGKHGFHVHEFGDTTNGCTSAGAHFNPTKQEHGAPEDSIRHV 83 (156)
T ss_dssp CEEEEEEBCSSSCEEEEEEEESSTTSCEEEEEEEESCCSEEEEEEEESCCCCTTTTGGGCSBCCTTCCCCCCTTCSSCCT
T ss_pred eEEEEEEeCCCccEEEEEEEEeCCCCCEEEEEEECCCCCCcEeEEEecCCCCCCChhhccCcCCCCCCCcCCcccCCCcc
Confidence 5689999875 699999999975 3469999999999999999999999999999999999999999998 46899
Q ss_pred CCcCceEeecCCceEecceeeeeecCcee
Q 024084 242 LSLVYIFPMILQWHFLTGLLDFISHLVTW 270 (272)
Q Consensus 242 GDLgni~~~~~~G~~~~~~~~~~~~~~~~ 270 (272)
||||||++ +.+|.+. ++++...++|
T Consensus 84 GDLgni~~-~~~G~a~---~~~~d~~~~l 108 (156)
T 1to4_A 84 GDLGNVVA-GADGNAV---YNATDKLISL 108 (156)
T ss_dssp TEEEEEEE-CTTSCEE---EEEEESSCBS
T ss_pred ccccCeEE-CCCceEE---EEEEecceec
Confidence 99999999 9999974 5566666654
No 11
>2e47_A EA4, TIME interVal measuring enzyme TIME; motalloprotein, glycoprotein, metal binding protein; HET: NAG MAN; 2.11A {Bombyx mori} PDB: 2e46_A
Probab=99.95 E-value=3.8e-28 Score=202.32 Aligned_cols=98 Identities=22% Similarity=0.364 Sum_probs=87.2
Q ss_pred hcceeeeecCCeeeeEEEEeeecC-cceEEEEEecCCCCCccceeecccCCCCCCCcccCCCcCCCCCCC-----CCCCC
Q 024084 168 VSAAVAEFKGPDVFGVVRLAQVNM-ELARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNPKIEGS-----AKEAV 241 (272)
Q Consensus 168 ~~~AvA~lkg~~v~G~v~f~q~~~-~~~~v~~~~~GL~~G~hg~HIHe~Gd~~~g~~saG~h~np~~~~h-----~~~h~ 241 (272)
+.+|+|+|++.+++|+|+| |..+ +.++|+++|+||+||+|||||||+|||+++|.|+|+||||+++.| ..||.
T Consensus 7 ~~~Ava~l~~~~v~G~v~f-q~~~g~~v~v~~~i~GL~pG~hg~HIHe~Gd~s~~c~SaGgHfnP~~~~Hg~p~~~~~h~ 85 (156)
T 2e47_A 7 PSRAIAVLSTETIRGNITF-TQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTGSHFNPEHKDHGHPNDVNRHV 85 (156)
T ss_dssp CCEEEEEEECSSCEEEEEE-EECGGGCEEEEEEEESSCSEEEEEEEESCCCCTTGGGGGCSBCCTTCCCCCCTTSSSSCT
T ss_pred ccEEEEEEeCCCeEEEEEE-EeCCCCcEEEEEEEEeCCCCcEEEEEeCCCcCCCChhhccCccCCCCCCCCCCCcCCCcc
Confidence 3578999998789999999 8764 359999999999999999999999999999999999999999998 46899
Q ss_pred CCcCceEeecCCceEecceeeeeecCcee
Q 024084 242 LSLVYIFPMILQWHFLTGLLDFISHLVTW 270 (272)
Q Consensus 242 GDLgni~~~~~~G~~~~~~~~~~~~~~~~ 270 (272)
||||||++ +++|.+ .++++...++|
T Consensus 86 GDLgni~~-~~~G~a---~~~~~d~~~~l 110 (156)
T 2e47_A 86 GDLGNVVF-DENHYS---RIDLVDDQISL 110 (156)
T ss_dssp TEEEEEEE-CTTSEE---EEEEEESSCBS
T ss_pred ccccCeEE-CCCceE---EEEEEccceec
Confidence 99999999 999997 45666666665
No 12
>1f1g_A Cuznsod, copper-zinc superoxide dismutase; nitric oxide, oxidoreductase; 1.35A {Saccharomyces cerevisiae} SCOP: b.1.8.1 PDB: 1f1a_A 1f18_A 1jcv_A 1b4l_A 1sdy_A 1yaz_A 1yso_A 2jcw_A 1f1d_A 1jk9_A 1b4t_A
Probab=99.95 E-value=5e-28 Score=201.33 Aligned_cols=98 Identities=31% Similarity=0.385 Sum_probs=87.0
Q ss_pred cceeeeecCC-eeeeEEEEeeec-CcceEEEEEecCCCC-CccceeecccCCCCCCCcccCCCcCCCCCCC-----CCCC
Q 024084 169 SAAVAEFKGP-DVFGVVRLAQVN-MELARIEANFSGLSP-GKHGWSINEFGDLTKGAVSTGRVYNPKIEGS-----AKEA 240 (272)
Q Consensus 169 ~~AvA~lkg~-~v~G~v~f~q~~-~~~~~v~~~~~GL~~-G~hg~HIHe~Gd~~~g~~saG~h~np~~~~h-----~~~h 240 (272)
.+|+|+|++. +++|+|+|+|.. .+.++|+++|+||+| |.|||||||+|||++||.|+|+||||++++| ..||
T Consensus 2 ~~Ava~l~g~~~v~G~v~f~q~~~~~~v~v~~~i~GL~p~G~hg~HIHe~Gd~s~gc~SaG~HfnP~~~~hg~p~~~~~h 81 (154)
T 1f1g_A 2 VQAVAVLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIHEFGDATNGCVSAGPHFNPFKKTHGAPTDEVRH 81 (154)
T ss_dssp CEEEEEEBCSSSCEEEEEEECSSTTSCEEEEEEEESCCSSCEEEEEEESCCCCTTTTGGGCSBCCTTCCCCCCTTSSSSC
T ss_pred eEEEEEEcCCCccEEEEEEEEeCCCCCEEEEEEEeeCCCCCeEeEEEecCCCCCCChhhccCccCCCCCCCCCCCcCCcc
Confidence 4689999875 699999999974 456999999999999 9999999999999999999999999999999 4789
Q ss_pred CCCcCceEeecCCceEecceeeeeecCcee
Q 024084 241 VLSLVYIFPMILQWHFLTGLLDFISHLVTW 270 (272)
Q Consensus 241 ~GDLgni~~~~~~G~~~~~~~~~~~~~~~~ 270 (272)
.||||||++ +.+|.+. ++++...++|
T Consensus 82 ~GDLgni~~-~~~G~a~---~~~~d~~~~l 107 (154)
T 1f1g_A 82 VGDMGNVKT-DENGVAK---GSFKDSLIKL 107 (154)
T ss_dssp TTEEEEEEC-CTTSCEE---EEEEESSCCS
T ss_pred cCcccCeEE-CCCceEE---EEEEccceEc
Confidence 999999999 9999974 5666666665
No 13
>2wyt_A Superoxide dismutase [CU-ZN]; oxidoreductase, disease mutation, amyotrophic lateral sclero antioxidant; HET: SO4; 1.00A {Homo sapiens} PDB: 2wyz_A* 2wz0_A* 2wz5_A* 1hl4_A 1spd_A 2c9v_A* 1hl5_A 1pu0_A 2c9u_A 2c9s_A* 2v0a_A* 3ecu_A 3kh3_A 3kh4_A 3re0_A 2wko_A 3gzo_A 2wz6_A* 3gzp_A 1uxl_A ...
Probab=99.95 E-value=5.1e-28 Score=201.02 Aligned_cols=97 Identities=24% Similarity=0.353 Sum_probs=86.5
Q ss_pred ceeeeecCC-eeeeEEEEeeecC-cceEEEEEecCCCCCccceeecccCCCCCCCcccCCCcCCCCCCC-----CCCCCC
Q 024084 170 AAVAEFKGP-DVFGVVRLAQVNM-ELARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNPKIEGS-----AKEAVL 242 (272)
Q Consensus 170 ~AvA~lkg~-~v~G~v~f~q~~~-~~~~v~~~~~GL~~G~hg~HIHe~Gd~~~g~~saG~h~np~~~~h-----~~~h~G 242 (272)
+|+|+|++. +++|+|+|+|..+ ..++|+++|+||+||+|||||||+|||+++|.|+|+||||+++.| ..||.|
T Consensus 3 ~Ava~l~~~~~v~G~v~f~q~~~g~~v~v~~~i~GL~pG~hg~HIHe~gd~~~~c~SaG~HfnP~~~~hg~p~~~~~h~G 82 (153)
T 2wyt_A 3 KAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGVTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVG 82 (153)
T ss_dssp EEEEEEBCSSSCEEEEEEEECSTTCCEEEEEEEESCCSEEEEEEEESCCCCTTGGGGGCSBCCTTCCCCCCTTCSSCCTT
T ss_pred EEEEEEcCCCceEEEEEEEEcCCCCcEEEEEEECCCCCcceeEEEecCCcCCCCcccccCccCCCCCCCCCCccCCCccC
Confidence 578999874 6999999999875 459999999999999999999999999999999999999999999 468999
Q ss_pred CcCceEeecCCceEecceeeeeecCcee
Q 024084 243 SLVYIFPMILQWHFLTGLLDFISHLVTW 270 (272)
Q Consensus 243 DLgni~~~~~~G~~~~~~~~~~~~~~~~ 270 (272)
|||||++ +.+|.+ .++++...++|
T Consensus 83 DLgni~~-~~~G~a---~~~~~d~~~~l 106 (153)
T 2wyt_A 83 DLGNVTA-DKDGVA---DVSIEDSVISL 106 (153)
T ss_dssp EEEEEEE-CTTSCE---EEEEEESSSBS
T ss_pred cccCeEE-CCCceE---EEEEEcceEec
Confidence 9999999 999997 46666666665
No 14
>3ce1_A Superoxide dismutase [CU-ZN]; greek-KEY beta barrel, antioxidant, copper, metal-binding, oxidoreductase, zinc; 1.20A {Cryptococcus liquefaciens}
Probab=99.94 E-value=1.3e-27 Score=201.17 Aligned_cols=99 Identities=19% Similarity=0.277 Sum_probs=86.5
Q ss_pred hcceeeeecCC-eeeeEEEEeeec-CcceEEEEEecCCCC-CccceeecccCCCCCCCcccCCCcCCCCCCC-----CCC
Q 024084 168 VSAAVAEFKGP-DVFGVVRLAQVN-MELARIEANFSGLSP-GKHGWSINEFGDLTKGAVSTGRVYNPKIEGS-----AKE 239 (272)
Q Consensus 168 ~~~AvA~lkg~-~v~G~v~f~q~~-~~~~~v~~~~~GL~~-G~hg~HIHe~Gd~~~g~~saG~h~np~~~~h-----~~~ 239 (272)
+.+|+|+|++. +++|+|+|+|.. .+.++|+++|+||+| |.|||||||+|||++||.|||+||||+++.| ..|
T Consensus 4 ~~~Ava~l~g~~~v~G~v~f~q~~~~~~v~v~~~i~GL~p~G~hg~HIHe~Gd~s~gc~SaGgHfnP~~~~Hg~p~~~~~ 83 (168)
T 3ce1_A 4 TIKAIAVLKGDSPVQGVITFTQESSGGPVTVSGEIKNMDANAQRGFHVHQFGDNSNGCTSAGPHFNPTGTNHGDRTAEVR 83 (168)
T ss_dssp -CEEEEEEBCSSSCEEEEEEEEC---CCEEEEEEEESCCTTCEEEEEEESCCCCTTGGGGGCSBCCTTCCCCCCTTSSSC
T ss_pred ccEEEEEEcCCCccEEEEEEEEeCCCCCEEEEEEEeeCCCCCeeeEEEecCCcCCCChhhccCccCCCCCCCCCCCcCCC
Confidence 46789999985 799999999974 456999999999999 9999999999999999999999999999999 479
Q ss_pred CCCCcCceEeecCCceEecceeeeeecCcee
Q 024084 240 AVLSLVYIFPMILQWHFLTGLLDFISHLVTW 270 (272)
Q Consensus 240 h~GDLgni~~~~~~G~~~~~~~~~~~~~~~~ 270 (272)
|.||||||++ +.+|.+ .++++...++|
T Consensus 84 h~GDLgni~~-~~~G~a---~~~~~d~~i~L 110 (168)
T 3ce1_A 84 HVGDLGNVKT-DASGVA---KVQISDSQLSL 110 (168)
T ss_dssp CTTEEEEEEB-CTTSCE---EEEEEESSCBS
T ss_pred cCCcccCeEE-CCCCcE---EEEecccceEe
Confidence 9999999999 999997 45666666665
No 15
>1xso_A Copper,zinc superoxide dismutase; oxidoreductase (superoxide acceptor); 1.49A {Xenopus laevis} SCOP: b.1.8.1
Probab=99.94 E-value=1.3e-27 Score=198.00 Aligned_cols=96 Identities=29% Similarity=0.439 Sum_probs=85.4
Q ss_pred ceeeeecCC-eeeeEEEEeeecCcceEEEEEecCCCCCccceeecccCCCCCCCcccCCCcCCCCCCC-----CCCCCCC
Q 024084 170 AAVAEFKGP-DVFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTKGAVSTGRVYNPKIEGS-----AKEAVLS 243 (272)
Q Consensus 170 ~AvA~lkg~-~v~G~v~f~q~~~~~~~v~~~~~GL~~G~hg~HIHe~Gd~~~g~~saG~h~np~~~~h-----~~~h~GD 243 (272)
+|+|+|++. +++|+|+|+|..++.++|+++|+||+||+|||||||+|||+++|.|+|+||||+++.| ..||.||
T Consensus 2 ~Ava~l~~~~~v~G~v~f~q~~~~~v~v~~~i~GL~pG~hg~HIHe~Gd~s~gc~saG~HfnP~~~~hg~p~~~~~h~GD 81 (150)
T 1xso_A 2 KAVCVLAGSGDVKGVVHFEQQDEGAVSVEGKIEGLTDGLHGFHIHVFGDNTNGCMSAGSHFNPENKNHGAPGDTDRHVGD 81 (150)
T ss_dssp EEEEEEBCSSSCEEEEEEEESTTSCEEEEEEEESCCSEEEEEEEESCCCCTTGGGGGCSBCCTTCCCCCCTTCSSSCTTE
T ss_pred EEEEEEcCCCccEEEEEEEEcCCCcEEEEEEECCCCCCceeEEEecCCCCCCCcccccCccCCCCCCCCCCccccccccc
Confidence 578999875 6999999999865579999999999999999999999999999999999999999999 4799999
Q ss_pred cCceEeecCCceEecceeeeeecCcee
Q 024084 244 LVYIFPMILQWHFLTGLLDFISHLVTW 270 (272)
Q Consensus 244 Lgni~~~~~~G~~~~~~~~~~~~~~~~ 270 (272)
||||++ .+|.+ .++++...++|
T Consensus 82 Lgni~~--~~G~a---~~~~~d~~~~l 103 (150)
T 1xso_A 82 LGNVTA--EGGVA---QFKITDSLISL 103 (150)
T ss_dssp EEEEEE--BTTEE---EEEEEESSCBS
T ss_pred ccCEEe--cCCeE---EEEeeccceee
Confidence 999999 78887 45666666665
No 16
>1ej8_A Lys7; beta barrel, copper chaperone for SOD, domain 2; 1.55A {Saccharomyces cerevisiae} SCOP: b.1.8.1
Probab=99.94 E-value=6.6e-28 Score=197.19 Aligned_cols=91 Identities=26% Similarity=0.229 Sum_probs=79.9
Q ss_pred ceeeeecCC-----------eeeeEEEEeeecCcceEEEEEecCCC-CCccceeecccCCCCCCCcccCCCcCCCCCCCC
Q 024084 170 AAVAEFKGP-----------DVFGVVRLAQVNMELARIEANFSGLS-PGKHGWSINEFGDLTKGAVSTGRVYNPKIEGSA 237 (272)
Q Consensus 170 ~AvA~lkg~-----------~v~G~v~f~q~~~~~~~v~~~~~GL~-~G~hg~HIHe~Gd~~~g~~saG~h~np~~~~h~ 237 (272)
+|||+|++. +++|+|+|+|..++.++|+++|+||+ ||+|||||||+|||++||.|||+||||++++|
T Consensus 2 aAV~vl~~~~~~~~~~~~~~~v~G~v~f~q~~~~~v~i~~~l~GL~~pG~HGfHIHe~Gd~s~g~~SaG~HfnP~~~~h- 80 (140)
T 1ej8_A 2 SAVAILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVNGVPEAGNYHASIHEKGDVSKGVESTGKVWHKFDEPI- 80 (140)
T ss_dssp EEEEEEECCSCCTTCCCCSCCEEEEEEEEEEETTEEEEEEEEEEESSCEEEEEEEESCCCCTTGGGGSCSEEEECCSCE-
T ss_pred cEEEEEccCCcccccccCCCCcEEEEEEEEeCCCCEEEEEEEECCCCCCeeEEEEcCCCCCCCCcccccCccCCCCCcc-
Confidence 578888763 58999999997556799999999999 99999999999999999999999999999876
Q ss_pred CCCCCCcCceEeecC-CceEecceeeeeecCcee
Q 024084 238 KEAVLSLVYIFPMIL-QWHFLTGLLDFISHLVTW 270 (272)
Q Consensus 238 ~~h~GDLgni~~~~~-~G~~~~~~~~~~~~~~~~ 270 (272)
||||||++ ++ +|.+. + ++...++|
T Consensus 81 ----GDLgni~~-~~~~G~a~---~-~~~~~i~l 105 (140)
T 1ej8_A 81 ----ECFNESDL-GKNLYSGK---T-FLSAPLPT 105 (140)
T ss_dssp ----EECEEEET-TTTEEEEE---E-EEEESCCG
T ss_pred ----cccCCEEE-ecCCcEEE---E-EECCCcCc
Confidence 99999999 99 99974 3 55665655
No 17
>1oal_A Superoxide dismutase; oxidoreductase, prokaryotic Cu, protein-subunit interaction recognition, protein electrostatic; 1.5A {Photobacterium leiognathi} SCOP: b.1.8.1 PDB: 1bzo_A 1ibh_A 1ibd_A 1yai_A 1ib5_A 1oaj_A 1ibb_A 1ibf_A
Probab=99.92 E-value=9.2e-26 Score=186.99 Aligned_cols=89 Identities=18% Similarity=0.250 Sum_probs=77.8
Q ss_pred CCeeeeEEEEeeecCcceEEEEEecCCCCCccceeecccCCCCCC--------CcccCCCcCCCC-CCC-----CCCCCC
Q 024084 177 GPDVFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTKG--------AVSTGRVYNPKI-EGS-----AKEAVL 242 (272)
Q Consensus 177 g~~v~G~v~f~q~~~~~~~v~~~~~GL~~G~hg~HIHe~Gd~~~g--------~~saG~h~np~~-~~h-----~~~h~G 242 (272)
..+++|+|+|+|... .++|+++|+||+||+|||||||+|||+++ |.|||+||||++ +.| ..||.|
T Consensus 12 ~~~v~G~v~f~q~~~-gv~v~~~l~GL~pG~hGfHIHe~Gd~~~g~~~G~~~~~~SaGgHfnP~~~~~Hg~p~~~~~h~G 90 (151)
T 1oal_A 12 TGKPVGTIELSQNKY-GVVFIPELADLTPGEHGFHIHQNGSCASSEKDGKVVLGGAAGGHYDPEHTNKHGFPWTDDNHKG 90 (151)
T ss_dssp TCCEEEEEEEEEETT-EEEEEEEECSCCSEEECEEEESSSCCCCEEETTEEETTGGGCSBCCTTCCCCCCCTTCSSSCTT
T ss_pred CCCeEEEEEEEEcCC-cEEEEEEEECCCCCcceEEEccCCcCCCccccCcccccccccCCcCCCCCCCCCCCCccccccc
Confidence 447899999999865 59999999999999999999999999974 679999999998 677 369999
Q ss_pred CcCceEeecCCceEecceeeeeecCcee
Q 024084 243 SLVYIFPMILQWHFLTGLLDFISHLVTW 270 (272)
Q Consensus 243 DLgni~~~~~~G~~~~~~~~~~~~~~~~ 270 (272)
|||||++ +++|.+ .++++...++|
T Consensus 91 DLgni~~-~~~G~a---~~~~~~~~i~l 114 (151)
T 1oal_A 91 DLPALFV-SANGLA---TNPVLAPRLTL 114 (151)
T ss_dssp BCCCEEE-CTTSCB---CCCEEETTCCH
T ss_pred cccCeEE-CCCCeE---EEEEEcCcCCh
Confidence 9999999 999997 46677766665
No 18
>1xtm_B Hypothetical superoxide dismutase-like protein YO; SOD, Cu-Zn SOD, SOD-like, superoxide dismutase mutants, STRU genomics, unknown function; 1.60A {Bacillus subtilis} PDB: 1xtl_B 1s4i_B 1u3n_A
Probab=99.92 E-value=1.8e-25 Score=189.31 Aligned_cols=97 Identities=12% Similarity=0.106 Sum_probs=82.1
Q ss_pred cceeeeecCC--eeeeEEEEeeecCcceEEEEEec--CC-CCCccceeecccCCCC-CCCcccCCCcCCCCCCC-----C
Q 024084 169 SAAVAEFKGP--DVFGVVRLAQVNMELARIEANFS--GL-SPGKHGWSINEFGDLT-KGAVSTGRVYNPKIEGS-----A 237 (272)
Q Consensus 169 ~~AvA~lkg~--~v~G~v~f~q~~~~~~~v~~~~~--GL-~~G~hg~HIHe~Gd~~-~g~~saG~h~np~~~~h-----~ 237 (272)
..|+|.|++. .+.|+|+|+| . +.++|+++|+ || +||+|||||||+|||+ ++|.|+|+||||+++.| .
T Consensus 20 ~~a~a~l~~~~g~~vG~v~f~q-~-~~v~v~~~i~~~GL~~pG~hg~HIHe~Gd~s~~~c~SaGgHfnP~~~~Hg~p~~~ 97 (175)
T 1xtm_B 20 FGHHVQLVNREGKAVGFIEIKE-S-DDEGLDIHISANSLRPGASLGFHIHEKGSCVRPDFESAGGHFNPLNKEHGFNNPM 97 (175)
T ss_dssp CEEEEEEEETTCCEEEEEEEEE-C-SSSSEEEEEEECSCCTTCEECEEEESSCCCCTTTCGGGCSBCCTTCCBSCTTCTT
T ss_pred ceEEEEEeCCCCCcEEEEEEEe-C-CCEEEEEEEEcCCCCCCCcceEEEecCCccCCCChhhccCccCCCcCCCCCCCcc
Confidence 3567777532 3449999999 5 4699999999 99 9999999999999999 59999999999999988 4
Q ss_pred CCCCCCcCceEeecCCceEecceeeeeecCceec
Q 024084 238 KEAVLSLVYIFPMILQWHFLTGLLDFISHLVTWE 271 (272)
Q Consensus 238 ~~h~GDLgni~~~~~~G~~~~~~~~~~~~~~~~~ 271 (272)
.+|.||||||++ +.+|.+ .++++...++|.
T Consensus 98 ~~h~GDLgni~~-~~~G~a---~~~~~d~~i~l~ 127 (175)
T 1xtm_B 98 GHHAGDLPNLEV-GADGKV---DVIMNAPDTSLK 127 (175)
T ss_dssp BCCTTBCCCEEC-CTTSCE---EEEEEETTCBCC
T ss_pred ccccccccCeEe-CCCCeE---EEEEEecceeec
Confidence 689999999999 999997 466666666653
No 19
>2aqm_A Superoxide dismutase [CU-ZN]; oxidoreductase; 1.10A {Brucella abortus}
Probab=99.92 E-value=1.8e-25 Score=185.86 Aligned_cols=87 Identities=16% Similarity=0.216 Sum_probs=76.8
Q ss_pred CeeeeEEEEeeecCcceEEEEEecCCCCCccceeecccCCCCCCCc--------ccCCCcCCCCC-CC----CCCCCCCc
Q 024084 178 PDVFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTKGAV--------STGRVYNPKIE-GS----AKEAVLSL 244 (272)
Q Consensus 178 ~~v~G~v~f~q~~~~~~~v~~~~~GL~~G~hg~HIHe~Gd~~~g~~--------saG~h~np~~~-~h----~~~h~GDL 244 (272)
.+++|+|+|+|..+ .++|+++|+||+||+|||||||+|||+++|+ |+|+||||+++ .| ..||.|||
T Consensus 16 ~~v~G~v~f~q~~~-gv~v~~~l~GL~pG~hGfHIHe~Gdc~~gc~~g~~~~~~SaGgHfnP~~~~~hg~p~~~~h~GDL 94 (154)
T 2aqm_A 16 GKEVGTVVISEAPG-GLHFKVNMEKLTPGYHGFHVHENPSCAPGEKDGKIVPALAAGGHYDPGNTHHHLGPEGDGHMGDL 94 (154)
T ss_dssp EEEEEEEEEECCTT-SEEEEEEECSCCSEEECEEEESSSCCCCEEETTEEETTGGGCSBCCTTCCCSCCCTTSSSCTTBC
T ss_pred CceEEEEEEEEcCC-CEEEEEEEECCCCCcceEEEccCCccCCccccccccccccccCCCCCcccccCCCCCccCccccc
Confidence 36999999999865 5999999999999999999999999999887 99999999996 56 26899999
Q ss_pred CceEeecCCceEecceeeeeecCce
Q 024084 245 VYIFPMILQWHFLTGLLDFISHLVT 269 (272)
Q Consensus 245 gni~~~~~~G~~~~~~~~~~~~~~~ 269 (272)
|||++ +.+|.+ .++++...++
T Consensus 95 gni~~-~~~G~a---~~~~~~~~~~ 115 (154)
T 2aqm_A 95 PRLSA-NADGKV---SETVVAPHLK 115 (154)
T ss_dssp CCEEE-CTTSCE---EEEEEETTCC
T ss_pred cCeEE-CCCceE---EEEEEcCCcc
Confidence 99999 999997 4566666665
No 20
>1eqw_A Cu,Zn superoxide dismutase; greek KEY B-barrel, oxidoreductase; 2.30A {Salmonella typhimurium} SCOP: b.1.8.1 PDB: 2wn0_A* 2wn1_A* 2wwn_A* 2wwo_A*
Probab=99.92 E-value=4.3e-25 Score=183.96 Aligned_cols=87 Identities=15% Similarity=0.223 Sum_probs=76.0
Q ss_pred CeeeeEEEEeeecCcceEEEEEecCCCCCccceeecccCCCCCC--------CcccCCCcCCCC-CCC-----CCCCCCC
Q 024084 178 PDVFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTKG--------AVSTGRVYNPKI-EGS-----AKEAVLS 243 (272)
Q Consensus 178 ~~v~G~v~f~q~~~~~~~v~~~~~GL~~G~hg~HIHe~Gd~~~g--------~~saG~h~np~~-~~h-----~~~h~GD 243 (272)
.+++|+|+|+|... .++|+++|+||+||+|||||||+|||+++ |.|+|+||||++ +.| ..||.||
T Consensus 16 ~~v~G~v~f~q~~~-gv~v~~~l~GL~pG~hGfHIHe~Gd~~~g~~~G~~~~~~SaGgHfnP~~~~~Hg~p~~~~~h~GD 94 (156)
T 1eqw_A 16 GENIGEITVSETPY-GLLFTPHLNGLTPGIHGFHVHTNPSCMPGMKDGKEVPALMAGGHLDPEKTGKHLGPYNDKGHLGD 94 (156)
T ss_dssp EEEEEEEEEEEETT-EEEEEEEECSCCSEEECEEEESSSCCCCEEETTEEETTGGGCSBCCTTCCCCCCCTTCTTSCTTB
T ss_pred CceEEEEEEEEcCC-cEEEEEEEeCCCCCceeEEECCCCcCCCcccCCcccccccccCccCCCCCCcCCCCCcccccccc
Confidence 36899999999865 59999999999999999999999999964 789999999998 667 3699999
Q ss_pred cCceEeecCCceEecceeeeeecCce
Q 024084 244 LVYIFPMILQWHFLTGLLDFISHLVT 269 (272)
Q Consensus 244 Lgni~~~~~~G~~~~~~~~~~~~~~~ 269 (272)
||||++ +.+|.+ .++++...++
T Consensus 95 Lgni~~-~~~G~a---~~~~~~~~~~ 116 (156)
T 1eqw_A 95 LPGLVV-NADGTA---TYPLLAPRLK 116 (156)
T ss_dssp CCCEEE-CTTSCB---CCCEEETTCC
T ss_pred ccCeEE-CCCCeE---EEEEEcCccc
Confidence 999999 999997 4566666665
No 21
>2aqp_A Superoxide dismutase [CU-ZN]; electrostatic guidance, neisseria MENI oxidoreductase; 1.30A {Neisseria meningitidis} PDB: 2aqn_A 2aqr_A 2aqq_A 2aqt_C 2aqs_A 2aps_A 1z9p_A
Probab=99.92 E-value=4.6e-25 Score=185.15 Aligned_cols=87 Identities=17% Similarity=0.215 Sum_probs=76.1
Q ss_pred CeeeeEEEEeeecCcceEEEEEecCCCCCccceeecccCCCCCC--------CcccCCCcCCCC-CCC-----CCCCCCC
Q 024084 178 PDVFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTKG--------AVSTGRVYNPKI-EGS-----AKEAVLS 243 (272)
Q Consensus 178 ~~v~G~v~f~q~~~~~~~v~~~~~GL~~G~hg~HIHe~Gd~~~g--------~~saG~h~np~~-~~h-----~~~h~GD 243 (272)
.+++|+|+|+|... .++|+++|+||+||+|||||||+|||+++ |.|+|+||||++ +.| ..||.||
T Consensus 25 ~~v~G~v~f~q~~~-gv~v~~~l~GL~pG~HGfHIHe~Gdc~~g~~~G~~~~~~SaGgHfnP~~~~~Hg~p~~~~~H~GD 103 (164)
T 2aqp_A 25 NKDVGTVTITESNY-GLVFTPDLQGLSAGLHGFHIHENPSCEPKEKEGKLTAGLGAGGHWDPKGAKQHGYPWQDDAHLGD 103 (164)
T ss_dssp CEEEEEEEEEEETT-EEEEEEEECSCCSEEECEEEESSSCCCCEEETTEEETTGGGCSBCCTTCCCSCCCTTCTTSCTTB
T ss_pred CceEEEEEEEEcCC-cEEEEEEEeCCCCCceeEEEecCCcccCcccCCcccccccccCccCCcCCCcCCCCCccccccCc
Confidence 37999999999865 59999999999999999999999999963 789999999998 677 3699999
Q ss_pred cCceEeecCCceEecceeeeeecCce
Q 024084 244 LVYIFPMILQWHFLTGLLDFISHLVT 269 (272)
Q Consensus 244 Lgni~~~~~~G~~~~~~~~~~~~~~~ 269 (272)
||||++ +.+|.+ .++++...++
T Consensus 104 Lgni~~-~~~G~a---~~~~~d~~~~ 125 (164)
T 2aqp_A 104 LPALTV-LHDGTA---TNPVLAPRLK 125 (164)
T ss_dssp CCCEEE-CTTSCB---CCCEEETTCC
T ss_pred ccCeEE-CCCceE---EEEEECCCcc
Confidence 999999 999997 4566666665
No 22
>1eso_A SOD, Cu, Zn superoxide dismutase; oxidoreductase, monomeric superoxide dismutase, copper enzymes, enzyme evolution, X- RAY; 2.00A {Escherichia coli} SCOP: b.1.8.1 PDB: 2k4w_A
Probab=99.91 E-value=6.7e-25 Score=182.41 Aligned_cols=86 Identities=17% Similarity=0.228 Sum_probs=75.7
Q ss_pred eeeeEEEEeeecCcceEEEEEecCCCCCccceeecccCCCCCC--------CcccCCCcCCCC-CCC----CCCCCCCcC
Q 024084 179 DVFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTKG--------AVSTGRVYNPKI-EGS----AKEAVLSLV 245 (272)
Q Consensus 179 ~v~G~v~f~q~~~~~~~v~~~~~GL~~G~hg~HIHe~Gd~~~g--------~~saG~h~np~~-~~h----~~~h~GDLg 245 (272)
+++|+|+|+|..+ .++|+++|+||+||+|||||||+|||+++ |.|+|+||||++ +.| ..||.||||
T Consensus 17 ~v~G~v~f~q~~~-gv~v~~~l~GL~pG~hGfHIHe~Gd~~~g~~~G~~~~~~SaGgHfnP~~~~~Hg~p~~~~h~GDLg 95 (154)
T 1eso_A 17 QSIGSVTITETDK-GLEFSPDLKALPPGEHGFHIHAKGSCQPATKDGKASAAESAGGHLDPQNTGKHEGPEGAGHLGDLP 95 (154)
T ss_dssp EEEEEEEEEEETT-EEEEEEEECSCCSEEECEEEESSSCCCCBCCSSSCBTTGGGCSBCCTTCCCCCCCTTSSSCTTBCC
T ss_pred ccEEEEEEEEcCC-CEEEEEEEECCCCCcccEEEcCCCccCCcccCCccccccccccccCCcCCCcCCCCCCCCcccccc
Confidence 6899999999865 59999999999999999999999999975 569999999998 677 368999999
Q ss_pred ceEeecCCceEecceeeeeecCce
Q 024084 246 YIFPMILQWHFLTGLLDFISHLVT 269 (272)
Q Consensus 246 ni~~~~~~G~~~~~~~~~~~~~~~ 269 (272)
||++ +.+|.+ .++++...++
T Consensus 96 ni~~-~~~G~a---~~~~~~~~~~ 115 (154)
T 1eso_A 96 ALVV-NNDGKA---TDAVIAPRLK 115 (154)
T ss_dssp CEEE-CTTSCB---CCCEEETTCC
T ss_pred CeEE-CCCCeE---EEEEEccccc
Confidence 9999 999997 4566666665
No 23
>1z9n_A Superoxide dismutase [CU-ZN]; Cu-Zn SOD, SOD, oxidoreductase; HET: HEM; 1.50A {Haemophilus ducreyi}
Probab=99.91 E-value=1.5e-24 Score=183.89 Aligned_cols=87 Identities=15% Similarity=0.211 Sum_probs=76.1
Q ss_pred CeeeeEEEEeeecCcceEEEEEecCCCCCccceeecccCCCCCC--------CcccCCCcCCCC-CCC-----CCCCCCC
Q 024084 178 PDVFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTKG--------AVSTGRVYNPKI-EGS-----AKEAVLS 243 (272)
Q Consensus 178 ~~v~G~v~f~q~~~~~~~v~~~~~GL~~G~hg~HIHe~Gd~~~g--------~~saG~h~np~~-~~h-----~~~h~GD 243 (272)
.+++|+|+|+|..+ +++|+++|+||+||+|||||||+|||+++ |.|+|+||||++ +.| ..||.||
T Consensus 38 ~~v~G~v~f~q~~~-gv~v~~~l~GL~pG~HGfHIHe~Gdcs~g~~dG~~~~c~SaGgHfnP~~~~~Hg~P~~~~~H~GD 116 (177)
T 1z9n_A 38 NKDVGTVEITESAY-GLVFTPKLHDLAHGLHGFHIHEKPSCEPKEKDGKLVAGLGAGGHWDPKQTQKHGYPWSDDAHMGD 116 (177)
T ss_dssp CEEEEEEEEEEETT-EEEEEEEECSCCSEEECEEEESSSCCCCEECSSSEETTGGGCSBCCTTCCCCCCCTTCTTSCTTB
T ss_pred CccEEEEEEEEcCC-cEEEEEEEeCCCCCceeEEEecCCccccccccCcccccccccCccCCCCCCCCCCCCCCCCcccc
Confidence 37999999999865 59999999999999999999999999964 679999999998 667 3689999
Q ss_pred cCceEeecCCceEecceeeeeecCce
Q 024084 244 LVYIFPMILQWHFLTGLLDFISHLVT 269 (272)
Q Consensus 244 Lgni~~~~~~G~~~~~~~~~~~~~~~ 269 (272)
||||++ +.+|.+ .++++...++
T Consensus 117 Lgni~~-~~~G~a---~~~~~d~~l~ 138 (177)
T 1z9n_A 117 LPALFV-MHDGSA---TTPVLAPRLK 138 (177)
T ss_dssp CCCEEE-CTTSCB---CCCEEETTCC
T ss_pred ccCeEE-CCCceE---EEEEEecCcc
Confidence 999999 999997 4566666665
No 24
>2jlp_A Extracellular superoxide dismutase (Cu-Zn); glycolisation, oxidoreductase, heparin binding, heparin-BIND oxidative stress, antioxidant; 1.70A {Homo sapiens}
Probab=99.91 E-value=1.1e-24 Score=190.16 Aligned_cols=89 Identities=21% Similarity=0.226 Sum_probs=77.3
Q ss_pred cceeeeecC--------CeeeeEEEEeeecC-cceEEEEEecCCCCC----ccceeecccCCCCCCCcccCCCcCCCCCC
Q 024084 169 SAAVAEFKG--------PDVFGVVRLAQVNM-ELARIEANFSGLSPG----KHGWSINEFGDLTKGAVSTGRVYNPKIEG 235 (272)
Q Consensus 169 ~~AvA~lkg--------~~v~G~v~f~q~~~-~~~~v~~~~~GL~~G----~hg~HIHe~Gd~~~g~~saG~h~np~~~~ 235 (272)
..|+|.+++ ++|.|+|+|+|..+ +.+.|+++|+||+|| .|||||||+|||++||.|+|+||||+++.
T Consensus 41 ~~Avc~l~~~a~~~~~~~~v~G~V~f~q~~~~~~v~v~~~l~GL~pG~~~g~HGfHIHe~Gd~s~gc~SAGgHfNP~~~~ 120 (222)
T 2jlp_A 41 LHAACQVQPSATLDAAQPRVTGVVLFRQLAPRAKLDAFFALEGFPTEPNSSSRAIHVHQFGDLSQGCESTGPHYNPLAVP 120 (222)
T ss_dssp EEEEEEEEECTTCCTTSCCCEEEEEEEESSTTSCEEEEEEEECSCSSSSEEEEEEEEESCCCCTTGGGGGCSBCCTTCCC
T ss_pred eEEEEEeeccccccCCCCCcEEEEEEEEeCCCCeEEEEEEEeCCCCCCCCCceeEEEECCCCCCCCcccccCCCCCCCCC
Confidence 467777752 36999999999874 359999999999998 89999999999999999999999999999
Q ss_pred CCCCCCCCcCceEeecCCceEecce
Q 024084 236 SAKEAVLSLVYIFPMILQWHFLTGL 260 (272)
Q Consensus 236 h~~~h~GDLgni~~~~~~G~~~~~~ 260 (272)
|. +|.||||||++ + +|.+...+
T Consensus 121 H~-~H~GDLgni~~-~-~G~a~~~~ 142 (222)
T 2jlp_A 121 HP-QHPGDFGNFAV-R-DGSLWRYR 142 (222)
T ss_dssp TT-CSTTEEEEEEE-E-TTBEEEEE
T ss_pred Cc-ccccccccEEe-c-CCcEEEEE
Confidence 85 89999999999 7 88874333
No 25
>1pzs_A Superoxide dismutase [CU-ZN]; Cu-protein, beta core, antioxidant, metal binding, greek KEY barrel, oxidoreductase; 1.63A {Mycobacterium tuberculosis} SCOP: b.1.8.1
Probab=99.90 E-value=5.8e-24 Score=184.38 Aligned_cols=97 Identities=19% Similarity=0.217 Sum_probs=83.6
Q ss_pred hcceeeeecCC--eeeeEEEEeeecCcceEEEEEecC---CCCCccceeecccCCCCC-----------CCcccCCCcCC
Q 024084 168 VSAAVAEFKGP--DVFGVVRLAQVNMELARIEANFSG---LSPGKHGWSINEFGDLTK-----------GAVSTGRVYNP 231 (272)
Q Consensus 168 ~~~AvA~lkg~--~v~G~v~f~q~~~~~~~v~~~~~G---L~~G~hg~HIHe~Gd~~~-----------g~~saG~h~np 231 (272)
..+|+|.|++. +++|+|+|+|.. +.++|+++|+| |+||+|||||||+|||++ +|.|+|+||||
T Consensus 37 ~~~ava~L~~~~g~v~G~V~f~q~~-~gv~v~~~l~G~~~L~pG~HGfHIHe~Gdcs~~~~~~~~G~~~~c~SAGgHfNP 115 (208)
T 1pzs_A 37 AQSLTSTLTAPDGTKVATAKFEFAN-GYATVTIATTGVGKLTPGFHGLHIHQVGKCEPNSVAPTGGAPGNFLSAGGHYHV 115 (208)
T ss_dssp -CEEEEEEECTTSCEEEEEEEEEET-TEEEEEEEESSSSSSCSEEECEEEESSCCCCSSBCCTTCCSCBTTGGGCSBCCC
T ss_pred CceEEEEEeCCCCceEEEEEEEEcC-CcEEEEEEEeCCccCCCCceeEEEecCCcccCcccccccCcccCcccccCcCCC
Confidence 35678888643 699999999986 47999999999 999999999999999987 79999999999
Q ss_pred CCCCCCCCCCCCcCceEeecCCceEecceeeeeecCcee
Q 024084 232 KIEGSAKEAVLSLVYIFPMILQWHFLTGLLDFISHLVTW 270 (272)
Q Consensus 232 ~~~~h~~~h~GDLgni~~~~~~G~~~~~~~~~~~~~~~~ 270 (272)
+++. ..+|.||||||++ +.||.+ .++|+...++|
T Consensus 116 ~~~~-g~P~~GDLgni~v-~~dG~a---~~~~~d~~l~L 149 (208)
T 1pzs_A 116 PGHT-GTPASGDLASLQV-RGDGSA---MLVTTTDAFTM 149 (208)
T ss_dssp TTCC-SSSCTTBCCCEEE-CTTSCC---EEEEEESSCCH
T ss_pred CCCC-CCCccccCcCcEe-CCCceE---EEEEEeCCccc
Confidence 9864 5679999999999 999997 46677776665
No 26
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=99.37 E-value=1.5e-12 Score=92.12 Aligned_cols=65 Identities=34% Similarity=0.640 Sum_probs=60.7
Q ss_pred EEEEEecCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeCCChhhhHHHHHhccccceeecC
Q 024084 95 LTEYMVDMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGSSPLKTMTEALEQTGRKARLVGQ 160 (272)
Q Consensus 95 ~v~~~VGM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~~~~~~I~~aI~~~Gy~a~~~~~ 160 (272)
+.+|.|||+|.+|+.+|+++|++++|| .+++|+..++++|.++.++++|.++|++.||++.+++.
T Consensus 3 ~~~~~vgm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~~ 67 (68)
T 3iwl_A 3 KHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLGL 67 (68)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHHTTCSCEEEEEC
T ss_pred eEEEEECcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecCCHHHHHHHHHHcCCceEecCC
Confidence 467888999999999999999999999 99999999999999989999999999999999988763
No 27
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=99.33 E-value=6.8e-12 Score=88.14 Aligned_cols=65 Identities=20% Similarity=0.458 Sum_probs=59.5
Q ss_pred eEEEEEe-cCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEe--CCChhhhHHHHHhccccceee
Q 024084 94 LLTEYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILG--SSPLKTMTEALEQTGRKARLV 158 (272)
Q Consensus 94 ~~v~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~--~~~~~~I~~aI~~~Gy~a~~~ 158 (272)
+++.|.| ||+|.+|+.+|+++|++++||..+++|+..++++|.+ ..++++|.++|++.||++.++
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~~ 69 (69)
T 4a4j_A 2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARVL 69 (69)
T ss_dssp EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHTTCEEEEC
T ss_pred CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHcCCceEeC
Confidence 3578999 9999999999999999999999999999999999985 368899999999999998753
No 28
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=99.31 E-value=9e-12 Score=88.84 Aligned_cols=66 Identities=23% Similarity=0.369 Sum_probs=60.7
Q ss_pred eEEEEEe-cCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeC---CChhhhHHHHHhccccceeec
Q 024084 94 LLTEYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGS---SPLKTMTEALEQTGRKARLVG 159 (272)
Q Consensus 94 ~~v~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~---~~~~~I~~aI~~~Gy~a~~~~ 159 (272)
.+++|.| ||+|.+|+.+|+++|++++||..+++|+..++++|.++ .++++|.++|++.||++.++.
T Consensus 2 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (74)
T 3dxs_X 2 RKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAGFEAEILA 71 (74)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEEEE
T ss_pred cEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceEEcc
Confidence 3578999 99999999999999999999999999999999999865 478899999999999988765
No 29
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=99.28 E-value=8.1e-12 Score=89.41 Aligned_cols=65 Identities=28% Similarity=0.394 Sum_probs=61.0
Q ss_pred eEEEEEe-cCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeCCChhhhHHHHHhccccceeecC
Q 024084 94 LLTEYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGSSPLKTMTEALEQTGRKARLVGQ 160 (272)
Q Consensus 94 ~~v~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~~~~~~I~~aI~~~Gy~a~~~~~ 160 (272)
.+++|.| ||+|.+|+.+|+++|++ +||..++||+..++++|.++ ++++|.++|+++||++.++..
T Consensus 5 ~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~-~~~~i~~~i~~~Gy~~~~~~~ 70 (73)
T 3fry_A 5 EKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE-DVDKYIKAVEAAGYQAKLRSS 70 (73)
T ss_dssp EEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG-GHHHHHHHHHHTTCEEEECCS
T ss_pred EEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC-CHHHHHHHHHHcCCceEecCc
Confidence 4578999 99999999999999999 99999999999999999988 899999999999999988764
No 30
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.21 E-value=1.4e-10 Score=88.41 Aligned_cols=74 Identities=41% Similarity=0.620 Sum_probs=66.7
Q ss_pred CCceEEEEEecCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeCCChhhhHHHHHhccccceeecCCCcc
Q 024084 91 LPELLTEYMVDMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGSSPLKTMTEALEQTGRKARLVGQGVPE 164 (272)
Q Consensus 91 ~~~~~v~~~VGM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~~~~~~I~~aI~~~Gy~a~~~~~g~~~ 164 (272)
+...+++|.|.|+|..|+.+|+++|++++||..++||+..++++|.+...+++|.++|+++||++.++..+.+.
T Consensus 16 ~~~~~~~l~V~m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~~~~~~i~~~i~~~Gy~~~~~~~~~~~ 89 (98)
T 2crl_A 16 GTLCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVLKGMGSGQ 89 (98)
T ss_dssp CCCEEEEEEECCCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEEEESCCCC
T ss_pred ccceEEEEEEeeECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCceEEccCCCCc
Confidence 34456778889999999999999999999999999999999999998888999999999999999988776554
No 31
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=99.20 E-value=1.1e-10 Score=83.12 Aligned_cols=65 Identities=26% Similarity=0.517 Sum_probs=60.0
Q ss_pred eEEEEEecCcChhhHHHHHHHHhCCC-CeeEEEEEcCCcEEEEEeCCChhhhHHHHHhccccceee
Q 024084 94 LLTEYMVDMKCEGCVDAVKQKLQTVT-GVKNVEVDLSNQVVRILGSSPLKTMTEALEQTGRKARLV 158 (272)
Q Consensus 94 ~~v~~~VGM~C~~C~~~VekaL~~l~-GV~~v~Vdl~~~~v~V~~~~~~~~I~~aI~~~Gy~a~~~ 158 (272)
.++.|.|.|+|.+|+.+|+++|++++ ||.++++|+..++++|.+..++++|.++|++.||++.++
T Consensus 5 ~~~~~~v~m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~ 70 (73)
T 1cc8_A 5 KHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVRSG 70 (73)
T ss_dssp EEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSSCEEEE
T ss_pred eEEEEEEeeECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCCceee
Confidence 35678888999999999999999999 999999999999999998888999999999999998765
No 32
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=99.14 E-value=7.8e-11 Score=80.17 Aligned_cols=61 Identities=25% Similarity=0.438 Sum_probs=56.8
Q ss_pred EEEEEe-cCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeCCChhhhHHHHHhccccc
Q 024084 95 LTEYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGSSPLKTMTEALEQTGRKA 155 (272)
Q Consensus 95 ~v~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~~~~~~I~~aI~~~Gy~a 155 (272)
++.|.| ||+|.+|+.+|++.|.+++||..+++|+..+++.|......+.|.++|++.||++
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~G~~~ 63 (64)
T 2xmm_A 2 TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGYEV 63 (64)
T ss_dssp CEEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECSSCHHHHHHHHHHTTCCC
T ss_pred eEEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence 357999 9999999999999999999999999999999999997778899999999999975
No 33
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=99.13 E-value=2e-10 Score=80.14 Aligned_cols=64 Identities=27% Similarity=0.416 Sum_probs=57.9
Q ss_pred eEEEEEe-cCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeC---CChhhhHHHHHhcccccee
Q 024084 94 LLTEYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGS---SPLKTMTEALEQTGRKARL 157 (272)
Q Consensus 94 ~~v~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~---~~~~~I~~aI~~~Gy~a~~ 157 (272)
.+..|.| ||+|.+|+.+|++.|++++||..+++|+..+++.|.++ ...++|.+.|++.||.+.+
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 70 (72)
T 1aw0_A 3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATL 70 (72)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEE
T ss_pred eEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHHHCCCCcEe
Confidence 4578999 99999999999999999999999999999999999875 4678899999999998754
No 34
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=99.12 E-value=6.8e-11 Score=81.95 Aligned_cols=62 Identities=35% Similarity=0.582 Sum_probs=56.5
Q ss_pred EEEe-cCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeCCChhhhHHHHHhccccceee
Q 024084 97 EYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGSSPLKTMTEALEQTGRKARLV 158 (272)
Q Consensus 97 ~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~~~~~~I~~aI~~~Gy~a~~~ 158 (272)
.|.| ||+|.+|+.+|+++|++++||..+++|+..+++.|.....+++|.++|++.||++..+
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~ 65 (66)
T 2roe_A 3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVEEEGYKAEVL 65 (66)
T ss_dssp CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEECSCCCHHHHHHHHHTTTCEEEEC
T ss_pred EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEECCCCCHHHHHHHHHHcCCCcEec
Confidence 5889 9999999999999999999999999999999999965567889999999999987653
No 35
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=99.11 E-value=4.4e-10 Score=77.95 Aligned_cols=64 Identities=20% Similarity=0.484 Sum_probs=57.3
Q ss_pred EEEEEe-cCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeC--CChhhhHHHHHhccccceee
Q 024084 95 LTEYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGS--SPLKTMTEALEQTGRKARLV 158 (272)
Q Consensus 95 ~v~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~--~~~~~I~~aI~~~Gy~a~~~ 158 (272)
++.|.| ||+|..|+..|++.|.+++||..+++|+..+++.|.++ ...++|.+.|++.||++.+.
T Consensus 4 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~ 70 (71)
T 2xmw_A 4 TINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARVL 70 (71)
T ss_dssp EEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC---CHHHHHHHHHHHTCEEEEE
T ss_pred EEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCHHHHHHHHHHcCCCceeC
Confidence 577999 99999999999999999999999999999999999865 46788999999999987653
No 36
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=99.11 E-value=4.1e-10 Score=78.45 Aligned_cols=65 Identities=22% Similarity=0.382 Sum_probs=58.1
Q ss_pred eEEEEEe-cCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeC---CChhhhHHHHHhccccceee
Q 024084 94 LLTEYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGS---SPLKTMTEALEQTGRKARLV 158 (272)
Q Consensus 94 ~~v~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~---~~~~~I~~aI~~~Gy~a~~~ 158 (272)
.++.|.| ||+|..|+.+|++.|.+++||..+++|+..+++.|.++ ...+.|.+.|++.||++.+.
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 71 (72)
T 1osd_A 3 QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSVK 71 (72)
T ss_dssp EEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEEC
T ss_pred eEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeEec
Confidence 3578999 99999999999999999999999999999999999864 46788999999999987653
No 37
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=99.11 E-value=1.1e-10 Score=86.58 Aligned_cols=62 Identities=21% Similarity=0.345 Sum_probs=58.3
Q ss_pred eEEEEEe-cCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeCCChhhhHHHHHhccccc
Q 024084 94 LLTEYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGSSPLKTMTEALEQTGRKA 155 (272)
Q Consensus 94 ~~v~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~~~~~~I~~aI~~~Gy~a 155 (272)
.++.|.| ||+|..|+.+|+++|++++||..+++|+..+++.|.++..+++|.++|+++||++
T Consensus 22 ~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~~~~~~i~~~i~~~Gy~~ 84 (85)
T 2k2p_A 22 AGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIITAAGYTP 84 (85)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESCCCHHHHHHHHHHTTCCC
T ss_pred cEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence 4578999 9999999999999999999999999999999999998888999999999999975
No 38
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=99.10 E-value=5.1e-10 Score=78.85 Aligned_cols=65 Identities=20% Similarity=0.355 Sum_probs=57.7
Q ss_pred eEEEEEe-cCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeCC-ChhhhHHHHHhccccceee
Q 024084 94 LLTEYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGSS-PLKTMTEALEQTGRKARLV 158 (272)
Q Consensus 94 ~~v~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~~-~~~~I~~aI~~~Gy~a~~~ 158 (272)
.++.|.| ||+|.+|+.+|++.|.+++||..+++|+..+++.|.++. ..+.|.+.|++.||++...
T Consensus 3 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~i~~~i~~~Gy~~~~~ 69 (73)
T 1mwy_A 3 TRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLRDE 69 (73)
T ss_dssp EEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTCEEEEC
T ss_pred eEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCHHHHHHHHHHcCCccccc
Confidence 3578999 999999999999999999999999999999999998763 3567889999999987654
No 39
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=99.10 E-value=6e-10 Score=78.66 Aligned_cols=65 Identities=28% Similarity=0.475 Sum_probs=58.5
Q ss_pred EEEEEe-cCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeC---CChhhhHHHHHhccccceeec
Q 024084 95 LTEYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGS---SPLKTMTEALEQTGRKARLVG 159 (272)
Q Consensus 95 ~v~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~---~~~~~I~~aI~~~Gy~a~~~~ 159 (272)
++.|.| ||+|..|+.+|++.|.+++||..+++|+..+++.|.++ ...++|.+.|++.||++.+..
T Consensus 3 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (75)
T 3cjk_B 3 SVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN 71 (75)
T ss_dssp EEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEeec
Confidence 467999 99999999999999999999999999999999999865 467889999999999876643
No 40
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=99.09 E-value=4.2e-10 Score=82.09 Aligned_cols=68 Identities=25% Similarity=0.445 Sum_probs=61.1
Q ss_pred eEEEEEe-cCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeC---CChhhhHHHHHhccccceeecCC
Q 024084 94 LLTEYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGS---SPLKTMTEALEQTGRKARLVGQG 161 (272)
Q Consensus 94 ~~v~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~---~~~~~I~~aI~~~Gy~a~~~~~g 161 (272)
.++.|.| ||+|.+|+.+|++.|.+++||..+++|+..+++.|.++ ...++|.+.|++.||++.+....
T Consensus 9 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~ 80 (84)
T 1q8l_A 9 VVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKKQP 80 (84)
T ss_dssp EEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSCCT
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEecCCc
Confidence 4688999 99999999999999999999999999999999999875 46788999999999998776643
No 41
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=99.08 E-value=2.7e-10 Score=79.07 Aligned_cols=62 Identities=26% Similarity=0.445 Sum_probs=56.2
Q ss_pred EEEe-cCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeC--CChhhhHHHHHhccccceee
Q 024084 97 EYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGS--SPLKTMTEALEQTGRKARLV 158 (272)
Q Consensus 97 ~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~--~~~~~I~~aI~~~Gy~a~~~ 158 (272)
.|.| ||+|..|+.+|+++|++++||..+++|+..+++.|.++ ...++|.+.|+++||++.+.
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~~ 67 (69)
T 2kt2_A 3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVAGLGYKATLA 67 (69)
T ss_dssp CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTTSCHHHHHHHHHTTTSEEECC
T ss_pred EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCHHHHHHHHHHCCCceEeC
Confidence 4889 99999999999999999999999999999999999865 46788999999999987654
No 42
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=99.07 E-value=6.7e-10 Score=77.28 Aligned_cols=62 Identities=26% Similarity=0.479 Sum_probs=56.2
Q ss_pred eEEEEEe-cCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeC---CChhhhHHHHHhccccc
Q 024084 94 LLTEYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGS---SPLKTMTEALEQTGRKA 155 (272)
Q Consensus 94 ~~v~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~---~~~~~I~~aI~~~Gy~a 155 (272)
.++.|.| ||+|..|+..|++.|.+++||..+.+|+..+++.|.++ ...++|.+.|++.||++
T Consensus 5 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 70 (71)
T 2l3m_A 5 EQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGYDV 70 (71)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHHHTTCEE
T ss_pred EEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 3578999 99999999999999999999999999999999999864 46788999999999975
No 43
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=99.07 E-value=5e-10 Score=76.99 Aligned_cols=61 Identities=25% Similarity=0.503 Sum_probs=55.8
Q ss_pred EEEe-cCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeC---CChhhhHHHHHhcccccee
Q 024084 97 EYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGS---SPLKTMTEALEQTGRKARL 157 (272)
Q Consensus 97 ~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~---~~~~~I~~aI~~~Gy~a~~ 157 (272)
.|.| ||+|..|+..|++.|++++||..+++|+..+++.|.++ ...++|.+.|++.||++.+
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 67 (68)
T 1cpz_A 3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEV 67 (68)
T ss_dssp EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEE
T ss_pred EEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCccc
Confidence 5899 99999999999999999999999999999999999865 4678899999999998764
No 44
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=99.07 E-value=4.7e-10 Score=80.13 Aligned_cols=67 Identities=27% Similarity=0.436 Sum_probs=59.8
Q ss_pred ceEEEEEe-cCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeC---CChhhhHHHHHhccccceeec
Q 024084 93 ELLTEYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGS---SPLKTMTEALEQTGRKARLVG 159 (272)
Q Consensus 93 ~~~v~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~---~~~~~I~~aI~~~Gy~a~~~~ 159 (272)
..++.|.| ||+|.+|+.+|+++|.+++||..+++|+..+++.|.++ ...++|.++|+++||.+.+..
T Consensus 7 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 77 (79)
T 1kvi_A 7 VNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN 77 (79)
T ss_dssp CEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHCCCEEECC
T ss_pred cEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHCCCceEecC
Confidence 35678999 99999999999999999999999999999999999865 467889999999999877654
No 45
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=99.06 E-value=7.2e-10 Score=82.48 Aligned_cols=68 Identities=16% Similarity=0.372 Sum_probs=60.1
Q ss_pred eEEEEEe-cCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeC---CChhhhHHHHHhc---cccceeecCC
Q 024084 94 LLTEYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGS---SPLKTMTEALEQT---GRKARLVGQG 161 (272)
Q Consensus 94 ~~v~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~---~~~~~I~~aI~~~---Gy~a~~~~~g 161 (272)
.++.|.| ||+|..|+.+|+++|.+++||..++||+..+++.|.++ ...++|.++|+++ ||++.+...+
T Consensus 3 ~~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~~~g~Ggy~~~~~~~~ 77 (90)
T 2g9o_A 3 STATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVSPGLYRVSITSEV 77 (90)
T ss_dssp EEEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHHTTSTTTCEEECCCCC
T ss_pred cEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHhccCCCeEEEEeCCC
Confidence 3578999 99999999999999999999999999999999999864 4678899999999 5988776643
No 46
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=99.06 E-value=5.8e-10 Score=76.22 Aligned_cols=61 Identities=21% Similarity=0.449 Sum_probs=55.4
Q ss_pred EEEEEe-cCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeC--CChhhhHHHHHhccccc
Q 024084 95 LTEYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGS--SPLKTMTEALEQTGRKA 155 (272)
Q Consensus 95 ~v~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~--~~~~~I~~aI~~~Gy~a 155 (272)
+..|.| ||+|..|+.+|++.|++++||..+++|+..+++.|.++ ...++|.+.|++.||.+
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~ 65 (66)
T 1yg0_A 2 KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLDAGQEV 65 (66)
T ss_dssp EEEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHHTCCC
T ss_pred eEEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCCCHHHHHHHHHHcCCCc
Confidence 467999 99999999999999999999999999999999999865 36788999999999974
No 47
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=99.05 E-value=6e-10 Score=78.23 Aligned_cols=64 Identities=23% Similarity=0.404 Sum_probs=57.1
Q ss_pred EEEEEe-cCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeC---CChhhhHHHHHhccccceee
Q 024084 95 LTEYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGS---SPLKTMTEALEQTGRKARLV 158 (272)
Q Consensus 95 ~v~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~---~~~~~I~~aI~~~Gy~a~~~ 158 (272)
++.|.| ||+|..|+.+|++.|.+++||..+++|+..+++.|.++ ..++.|.+.|++.||.+.+.
T Consensus 5 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 72 (75)
T 1yjr_A 5 VLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGFEPSLV 72 (75)
T ss_dssp CEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHHHHHCEEEES
T ss_pred EEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCceee
Confidence 467999 99999999999999999999999999999999999875 34578899999999987653
No 48
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=99.03 E-value=8.2e-10 Score=76.90 Aligned_cols=65 Identities=17% Similarity=0.419 Sum_probs=58.5
Q ss_pred EEEEEe-cCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeC--CChhhhHHHHHhccccceeec
Q 024084 95 LTEYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGS--SPLKTMTEALEQTGRKARLVG 159 (272)
Q Consensus 95 ~v~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~--~~~~~I~~aI~~~Gy~a~~~~ 159 (272)
++.|.| ||+|..|+.+|++.|.+++||..+++|+..+++.|.++ ...+.|.+.|++.||++.++.
T Consensus 3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~~ 70 (72)
T 1fvq_A 3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDCEILR 70 (72)
T ss_dssp EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEECTTSCHHHHHHHHHHHTCCEEEEE
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHCCCceEEcc
Confidence 567999 99999999999999999999999999999999999865 457789999999999887653
No 49
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=99.03 E-value=8.6e-10 Score=75.99 Aligned_cols=63 Identities=17% Similarity=0.356 Sum_probs=56.6
Q ss_pred eEEEEEe-cCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeC---CChhhhHHHHHhccccce
Q 024084 94 LLTEYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGS---SPLKTMTEALEQTGRKAR 156 (272)
Q Consensus 94 ~~v~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~---~~~~~I~~aI~~~Gy~a~ 156 (272)
.+..|.| ||+|.+|+.+|++.|.+++||..+++|+..+++.|.++ ...++|.+.|++.||++.
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~ 69 (71)
T 2ldi_A 3 KTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLA 69 (71)
T ss_dssp EEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHHTTTCEEE
T ss_pred EEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcc
Confidence 3567999 99999999999999999999999999999999999865 467789999999999764
No 50
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=99.02 E-value=1.4e-09 Score=76.29 Aligned_cols=65 Identities=20% Similarity=0.429 Sum_probs=58.1
Q ss_pred eEEEEEe-cCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeC---CChhhhHHHHHhccccceee
Q 024084 94 LLTEYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGS---SPLKTMTEALEQTGRKARLV 158 (272)
Q Consensus 94 ~~v~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~---~~~~~I~~aI~~~Gy~a~~~ 158 (272)
.+..|.| ||+|.+|+..|++.|.+++||..+.+|+..+++.|.++ ...+.|.+.|++.||++.++
T Consensus 6 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 74 (76)
T 1opz_A 6 KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVVIE 74 (76)
T ss_dssp EEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEECC
T ss_pred eEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceecC
Confidence 3578999 99999999999999999999999999999999999864 46788999999999987654
No 51
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=99.02 E-value=1.8e-09 Score=73.64 Aligned_cols=61 Identities=28% Similarity=0.477 Sum_probs=55.4
Q ss_pred EEEEEe-cCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeC---CChhhhHHHHHhccccc
Q 024084 95 LTEYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGS---SPLKTMTEALEQTGRKA 155 (272)
Q Consensus 95 ~v~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~---~~~~~I~~aI~~~Gy~a 155 (272)
+..|.| ||+|.+|+..|++.|..++||..+.+|+..+++.|.++ ...+.|.+.|++.||++
T Consensus 3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 67 (69)
T 2qif_A 3 QKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV 67 (69)
T ss_dssp EEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred EEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence 467999 99999999999999999999999999999999999865 46778999999999975
No 52
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=99.02 E-value=4.4e-10 Score=78.13 Aligned_cols=62 Identities=23% Similarity=0.355 Sum_probs=56.1
Q ss_pred EEEEEe-cCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeCCChhhhHHHHHhccccceee
Q 024084 95 LTEYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGSSPLKTMTEALEQTGRKARLV 158 (272)
Q Consensus 95 ~v~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~~~~~~I~~aI~~~Gy~a~~~ 158 (272)
+..|.| ||+|.+|+.+|+++|+++ ||..+.+|+..+++.|.++.. ++|.++|++.||++.++
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~-~~i~~~i~~~Gy~~~~~ 64 (67)
T 2kyz_A 2 RYVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL-DSVLKKLEEIDYPVESY 64 (67)
T ss_dssp EEEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH-HHHHHHHHTTTCCCCBC
T ss_pred eEEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH-HHHHHHHHHcCCceeeE
Confidence 357999 999999999999999999 999999999999999987755 88999999999987653
No 53
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=98.99 E-value=2.6e-09 Score=79.84 Aligned_cols=72 Identities=18% Similarity=0.243 Sum_probs=63.8
Q ss_pred ceEEEEEe-cCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeC---CChhhhHHHHHhccccceeecCCCcc
Q 024084 93 ELLTEYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGS---SPLKTMTEALEQTGRKARLVGQGVPE 164 (272)
Q Consensus 93 ~~~v~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~---~~~~~I~~aI~~~Gy~a~~~~~g~~~ 164 (272)
..++.|.| ||+|.+|+..|++.|..++||..+.+|+..+.+.|.++ ...+.|.++|+.+||.+.+...|.++
T Consensus 15 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~~~ 90 (95)
T 2kkh_A 15 LQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALNEARLEANVRVNGETS 90 (95)
T ss_dssp SEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCCCCCC
T ss_pred eEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEecCCCcc
Confidence 34578999 99999999999999999999999999999999999865 36788999999999999888777654
No 54
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=98.99 E-value=7.5e-10 Score=78.80 Aligned_cols=65 Identities=18% Similarity=0.298 Sum_probs=58.6
Q ss_pred EEEEEe-cCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeC---CChhhhHHHHHhccccceeec
Q 024084 95 LTEYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGS---SPLKTMTEALEQTGRKARLVG 159 (272)
Q Consensus 95 ~v~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~---~~~~~I~~aI~~~Gy~a~~~~ 159 (272)
++.|.| ||+|..|+.+|+++|.+++||..+++|+..+++.|.++ ...++|.++|+++||.+.+..
T Consensus 4 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 72 (77)
T 1y3j_A 4 KCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGATVIE 72 (77)
T ss_dssp EEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHHHHTSCEEEES
T ss_pred EEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEECC
Confidence 478999 99999999999999999999999999999999999865 467789999999999887654
No 55
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=98.92 E-value=4.4e-09 Score=81.43 Aligned_cols=64 Identities=17% Similarity=0.272 Sum_probs=57.4
Q ss_pred eEEEEEe-cCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeC---CChhhhHHHHHhcccccee
Q 024084 94 LLTEYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGS---SPLKTMTEALEQTGRKARL 157 (272)
Q Consensus 94 ~~v~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~---~~~~~I~~aI~~~Gy~a~~ 157 (272)
.++.|.| ||+|..|+.+|+++|++++||..++||+..+++.|.++ ...++|.++|+++||++..
T Consensus 8 ~~~~l~v~Gm~C~~Ca~~Ie~~L~~~~GV~~v~v~~~~~~~~V~~~~~~~~~~~i~~~i~~~Gy~~~~ 75 (111)
T 2ofg_X 8 KTQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLAE 75 (111)
T ss_dssp EEEEEEESCCCGGGTHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTTCSHHHHHHHHHTTTCCEEC
T ss_pred eEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEECCCCEEEEEECCCCCCHHHHHHHHHHcCCeeee
Confidence 4578999 99999999999999999999999999999999999875 4668899999999997543
No 56
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=98.92 E-value=3.2e-09 Score=75.47 Aligned_cols=65 Identities=25% Similarity=0.562 Sum_probs=58.3
Q ss_pred EEEEEe-cCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeC---CChhhhHHHHHhccccceeec
Q 024084 95 LTEYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGS---SPLKTMTEALEQTGRKARLVG 159 (272)
Q Consensus 95 ~v~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~---~~~~~I~~aI~~~Gy~a~~~~ 159 (272)
+..|.| ||+|.+|+..|++.|.+++||..+.+|+..+++.|.++ ...+.|.+.|++.||++.+..
T Consensus 4 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~ 72 (80)
T 1jww_A 4 KAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKG 72 (80)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHHHHTSEEEECC
T ss_pred EEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCeEEecC
Confidence 467999 99999999999999999999999999999999999864 467789999999999877654
No 57
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=98.91 E-value=3.2e-09 Score=84.75 Aligned_cols=63 Identities=22% Similarity=0.387 Sum_probs=58.0
Q ss_pred EEEEEe-cCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeC---CChhhhHHHHHhcccccee
Q 024084 95 LTEYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGS---SPLKTMTEALEQTGRKARL 157 (272)
Q Consensus 95 ~v~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~---~~~~~I~~aI~~~Gy~a~~ 157 (272)
++.|.| ||+|.+|+.+|+++|++++||..+++|+..+++.|.++ ..+++|.++|+++||++.+
T Consensus 81 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 147 (149)
T 2ew9_A 81 NIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIGFHASL 147 (149)
T ss_dssp EEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHHHHTCEEEC
T ss_pred eeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhCCCceEe
Confidence 578999 99999999999999999999999999999999999875 4678899999999998765
No 58
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.89 E-value=4.6e-09 Score=84.25 Aligned_cols=67 Identities=24% Similarity=0.540 Sum_probs=60.7
Q ss_pred eEEEEEe-cCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeC---CChhhhHHHHHhccccceeecC
Q 024084 94 LLTEYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGS---SPLKTMTEALEQTGRKARLVGQ 160 (272)
Q Consensus 94 ~~v~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~---~~~~~I~~aI~~~Gy~a~~~~~ 160 (272)
.++.|.| ||+|.+|+.+|+++|.+++||..+++|+..+++.|.++ ..+++|.++|+++||++.+...
T Consensus 74 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 144 (151)
T 1p6t_A 74 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGE 144 (151)
T ss_dssp EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCS
T ss_pred cccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCCeEEcCc
Confidence 4578999 99999999999999999999999999999999999865 4788999999999999877554
No 59
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=98.82 E-value=9.3e-09 Score=71.96 Aligned_cols=61 Identities=21% Similarity=0.448 Sum_probs=53.7
Q ss_pred EEEEEe-cCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeCCChhhhHHHHHhccccceeec
Q 024084 95 LTEYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGSSPLKTMTEALEQTGRKARLVG 159 (272)
Q Consensus 95 ~v~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~~~~~~I~~aI~~~Gy~a~~~~ 159 (272)
+..|.| ||+|..|+..|+++|.+++||..+++|+..+++.|.++.. .+.|+++||.+.+..
T Consensus 4 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~----~~~i~~~Gy~~~~~~ 65 (71)
T 2aj0_A 4 KTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS----IQQVEQAGAFEHLKI 65 (71)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC----HHHHHHHHTTTTCEE
T ss_pred EEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc----HHHHHHhCCCccccc
Confidence 467999 9999999999999999999999999999999999987653 567889999876544
No 60
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.79 E-value=1.7e-08 Score=85.74 Aligned_cols=67 Identities=22% Similarity=0.443 Sum_probs=59.6
Q ss_pred eEEEEEe-cCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeC---CChhhhHHHHHhccccceeecC
Q 024084 94 LLTEYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGS---SPLKTMTEALEQTGRKARLVGQ 160 (272)
Q Consensus 94 ~~v~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~---~~~~~I~~aI~~~Gy~a~~~~~ 160 (272)
.++.|.| ||+|.+|+.+|+++|.+++||..+.||+..+++.|.++ ..+++|.++|+++||++.++..
T Consensus 122 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 192 (202)
T 2rop_A 122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIEDMGFEASVVSE 192 (202)
T ss_dssp EEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSCEEEC--
T ss_pred eEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEcCC
Confidence 4678999 99999999999999999999999999999999999865 4678899999999999877654
No 61
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=98.73 E-value=2.9e-08 Score=79.02 Aligned_cols=66 Identities=21% Similarity=0.294 Sum_probs=58.8
Q ss_pred ceEEEEEe-cCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeC---CChhhhHHHHHhccccceee
Q 024084 93 ELLTEYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGS---SPLKTMTEALEQTGRKARLV 158 (272)
Q Consensus 93 ~~~v~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~---~~~~~I~~aI~~~Gy~a~~~ 158 (272)
..++.|.| ||+|.+|+.+|++.|++++||..+.+|+..+++.|.++ ..+++|.+.|++.||++.+.
T Consensus 3 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 72 (149)
T 2ew9_A 3 PQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAVM 72 (149)
T ss_dssp CEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEEC
T ss_pred cEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHhcCCCceEee
Confidence 45688999 99999999999999999999999999999999999864 45678999999999987654
No 62
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=98.40 E-value=5e-07 Score=91.26 Aligned_cols=64 Identities=22% Similarity=0.342 Sum_probs=58.8
Q ss_pred EEEEEe-cCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeC---CChhhhHHHHHhccccceee
Q 024084 95 LTEYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGS---SPLKTMTEALEQTGRKARLV 158 (272)
Q Consensus 95 ~v~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~---~~~~~I~~aI~~~Gy~a~~~ 158 (272)
+++|.| ||+|.+|+.+||+.|++++||.+++||+..+++.|.++ .++++|.++|++.||++...
T Consensus 3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~~~Gy~~~~~ 70 (723)
T 3j09_A 3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGYGVVDE 70 (723)
T ss_dssp CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHCCEESSC
T ss_pred eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHHhcCCccccc
Confidence 478999 99999999999999999999999999999999999875 47889999999999998654
No 63
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.39 E-value=1e-06 Score=70.29 Aligned_cols=62 Identities=21% Similarity=0.455 Sum_probs=55.1
Q ss_pred eEEEEEe-cCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeC---CChhhhHHHHHhccccc
Q 024084 94 LLTEYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGS---SPLKTMTEALEQTGRKA 155 (272)
Q Consensus 94 ~~v~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~---~~~~~I~~aI~~~Gy~a 155 (272)
.+..|.| ||+|.+|+.+|++.|.+++||..+.+++..+++.+.++ ...+.+.+.+++.||++
T Consensus 6 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 71 (151)
T 1p6t_A 6 KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHV 71 (151)
T ss_dssp EEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEE
T ss_pred eEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHHHcCCcc
Confidence 3567999 99999999999999999999999999999999988754 35678889999999965
No 64
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.37 E-value=7.4e-07 Score=75.42 Aligned_cols=63 Identities=19% Similarity=0.409 Sum_probs=55.1
Q ss_pred eEEEEEe-cCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeC---CChhhhHHHHHhcc---ccce
Q 024084 94 LLTEYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGS---SPLKTMTEALEQTG---RKAR 156 (272)
Q Consensus 94 ~~v~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~---~~~~~I~~aI~~~G---y~a~ 156 (272)
.++.|.| ||+|.+|+.+|+++|.+++||..+.|++..+++.|.++ ..++.|.++|++.| |.+.
T Consensus 20 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~~~gg~~v~ 89 (202)
T 2rop_A 20 VTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIEALPPGNFKVS 89 (202)
T ss_dssp CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHTTSSSSCSEEE
T ss_pred EEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHhccCCeEEE
Confidence 3577999 99999999999999999999999999999999999865 46788999999883 6553
No 65
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=74.64 E-value=9.5 Score=27.05 Aligned_cols=56 Identities=7% Similarity=0.106 Sum_probs=41.4
Q ss_pred EEEEEe-cCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeC--CChhhhHHHHHhccccceeec
Q 024084 95 LTEYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGS--SPLKTMTEALEQTGRKARLVG 159 (272)
Q Consensus 95 ~v~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~--~~~~~I~~aI~~~Gy~a~~~~ 159 (272)
..++.. |+.|+.-.-+++++|++++. .+.+.|..+ ...+.|....+..||.+....
T Consensus 10 ~~~lD~rGl~CP~Pvl~~kkal~~l~~---------G~~l~V~~dd~~a~~di~~~~~~~G~~~~~~~ 68 (82)
T 3lvj_C 10 DHTLDALGLRCPEPVMMVRKTVRNMQP---------GETLLIIADDPATTRDIPGFCTFMEHELVAKE 68 (82)
T ss_dssp SEEEECTTCCTTHHHHHHHHHHHTSCT---------TCEEEEEECCTTHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEECCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEECCccHHHHHHHHHHHCCCEEEEEE
Confidence 367899 99999999999999998842 223344333 345678888899999876543
No 66
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=68.24 E-value=13 Score=27.40 Aligned_cols=55 Identities=13% Similarity=0.164 Sum_probs=41.5
Q ss_pred EEEEe-cCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeC--CChhhhHHHHHhccccceeec
Q 024084 96 TEYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGS--SPLKTMTEALEQTGRKARLVG 159 (272)
Q Consensus 96 v~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~--~~~~~I~~aI~~~Gy~a~~~~ 159 (272)
.++.. |+.|+.-+-+++++|++++. .+.+.|..+ ...+.|...++..||.+....
T Consensus 27 ~~LD~rGl~CP~Pvl~tkkaL~~l~~---------Ge~L~Vl~dd~~a~~dI~~~~~~~G~~v~~~e 84 (98)
T 1jdq_A 27 KTLDVRGEVCPVPDVETKRALQNMKP---------GEILEVWIDYPMSKERIPETVKKLGHEVLEIE 84 (98)
T ss_dssp EEEECSSCCSSHHHHHHHHHHHTCCT---------TCEEEEEESSCTHHHHHHHHHHHSSCCEEEEE
T ss_pred EEEeCCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEECCccHHHHHHHHHHHCCCEEEEEE
Confidence 56899 99999999999999999743 233444433 345788888999999876543
No 67
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=63.47 E-value=11 Score=28.23 Aligned_cols=61 Identities=18% Similarity=0.216 Sum_probs=41.2
Q ss_pred EEEEEe-cCcChhhHHHHHHHHhCCCCeeEEEEEc-----CCcEE--EEEeC-CChhhhHHHHHhccccce
Q 024084 95 LTEYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVDL-----SNQVV--RILGS-SPLKTMTEALEQTGRKAR 156 (272)
Q Consensus 95 ~v~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vdl-----~~~~v--~V~~~-~~~~~I~~aI~~~Gy~a~ 156 (272)
++.+.| -.+-+. .-.+-+.|.+++||..|++.+ ..+.+ +|+++ ++.++|.++|++.|--+.
T Consensus 8 RlVLDVlKPh~P~-ivdlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE~~GgvIH 77 (100)
T 3bpd_A 8 RLVLDVLKPHEPK-TIVFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDMGGVIH 77 (100)
T ss_dssp EEEEEEEEESCSC-HHHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTTCEEE
T ss_pred EEEEEecCCCCCC-HHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEE
Confidence 455666 333333 346677899999999887643 33433 44444 899999999999986544
No 68
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=62.48 E-value=11 Score=27.86 Aligned_cols=35 Identities=31% Similarity=0.555 Sum_probs=26.3
Q ss_pred EEEEecCcChhh------HHHHHHHHhCCCCeeEEEEEcCC
Q 024084 96 TEYMVDMKCEGC------VDAVKQKLQTVTGVKNVEVDLSN 130 (272)
Q Consensus 96 v~~~VGM~C~~C------~~~VekaL~~l~GV~~v~Vdl~~ 130 (272)
+.+.+-+++++| ...|+.+|.+++||.+++|++..
T Consensus 43 V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~V~V~l~~ 83 (103)
T 3cq1_A 43 AYVRMTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEVTF 83 (103)
T ss_dssp EEEEECCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEECC
T ss_pred EEEEEEECCCCCcHHHHHHHHHHHHHHhCCCceeEEEEEec
Confidence 455556667666 56789999999999998887543
No 69
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=60.34 E-value=17 Score=26.92 Aligned_cols=63 Identities=14% Similarity=0.229 Sum_probs=42.5
Q ss_pred eEEEEEe--cCcChhhHHHHHHHHhCCCCeeEEEEEc-----CCcE--EEEEeC-CChhhhHHHHHhcccccee
Q 024084 94 LLTEYMV--DMKCEGCVDAVKQKLQTVTGVKNVEVDL-----SNQV--VRILGS-SPLKTMTEALEQTGRKARL 157 (272)
Q Consensus 94 ~~v~~~V--GM~C~~C~~~VekaL~~l~GV~~v~Vdl-----~~~~--v~V~~~-~~~~~I~~aI~~~Gy~a~~ 157 (272)
.++.+.| .++-+.- -.+-+.|.+++||..+++.+ ..+. ++|+++ ++.++|.++|++.|--.+-
T Consensus 5 rRlVLDVlKP~h~P~i-vd~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE~~Gg~IHS 77 (96)
T 2x3d_A 5 RRLVLDVLKPIRGTSI-VDLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLEEEGCAIHS 77 (96)
T ss_dssp EEEEEEEEEESSSSCH-HHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHHHTTCEEEE
T ss_pred EEEEEEcccCCCCCCH-HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEe
Confidence 3455666 3344443 35677899999999887643 3333 344554 8999999999999965543
No 70
>3hz7_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Desulfitobacterium hafniense}
Probab=60.11 E-value=11 Score=27.10 Aligned_cols=54 Identities=17% Similarity=0.169 Sum_probs=40.0
Q ss_pred EEEe-cCcChhhHHHHHHHHhCCC-CeeEEEEEcCCcEEEEEeC--CChhhhHHHHHhccccceeec
Q 024084 97 EYMV-DMKCEGCVDAVKQKLQTVT-GVKNVEVDLSNQVVRILGS--SPLKTMTEALEQTGRKARLVG 159 (272)
Q Consensus 97 ~~~V-GM~C~~C~~~VekaL~~l~-GV~~v~Vdl~~~~v~V~~~--~~~~~I~~aI~~~Gy~a~~~~ 159 (272)
++.. |+.|+.-.-+++++|++++ . .+.+.|..+ ...+.|....+..||.+....
T Consensus 3 ~lD~rGl~CP~Pvl~~kkal~~l~~~---------G~~L~V~~dd~~a~~dI~~~~~~~G~~v~~~~ 60 (87)
T 3hz7_A 3 TIDALGQVCPIPVIRAKKALAELGEA---------GGVVTVLVDNDISRQNLQKMAEGMGYQSEYLE 60 (87)
T ss_dssp EEECTTCCTTHHHHHHHHHHHTTGGG---------CCEEEEEESSHHHHHHHHHHHHHHTCEEEEEE
T ss_pred EEEcCCCCCCHHHHHHHHHHHhccCC---------CCEEEEEECCccHHHHHHHHHHHCCCEEEEEE
Confidence 5788 9999999999999999983 2 123344433 356678888899999876544
No 71
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=58.06 E-value=18 Score=26.62 Aligned_cols=54 Identities=6% Similarity=0.123 Sum_probs=40.3
Q ss_pred EEEEe-cCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeC--CChhhhHHHHHhccccceee
Q 024084 96 TEYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGS--SPLKTMTEALEQTGRKARLV 158 (272)
Q Consensus 96 v~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~--~~~~~I~~aI~~~Gy~a~~~ 158 (272)
.++.. |+.|+.-.-+++++|++++. .+.+.|..+ ...+.|...++..||.+...
T Consensus 28 ~~LD~rGl~CP~PvlktkkaL~~l~~---------Ge~L~Vl~dd~~a~~dIp~~~~~~G~~v~~~ 84 (97)
T 1je3_A 28 YRLDMVGEPCPYPAVATLEAMPQLKK---------GEILEVVSDCPQSINNIPLDARNHGYTVLDI 84 (97)
T ss_dssp EEECSBCCSSSSSTHHHHHHTTTCCS---------SCEEEEEEBCSSSSCHHHHHHHHHTCSEEEE
T ss_pred eEEeCCCCCCCHHHHHHHHHHHcCCC---------CCEEEEEECCcchHHHHHHHHHHCCCEEEEE
Confidence 56888 99999999999999998843 223333322 45678888899999987653
No 72
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=56.90 E-value=18 Score=26.88 Aligned_cols=63 Identities=16% Similarity=0.215 Sum_probs=42.2
Q ss_pred eEEEEEe-cCcChhhHHHHHHHHhCCCCeeEEEEE-----cCCcEE--EEEeC-CChhhhHHHHHhcccccee
Q 024084 94 LLTEYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVD-----LSNQVV--RILGS-SPLKTMTEALEQTGRKARL 157 (272)
Q Consensus 94 ~~v~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vd-----l~~~~v--~V~~~-~~~~~I~~aI~~~Gy~a~~ 157 (272)
.++.+.| -.+-+. .-.+-+.|.+++||..+++. ...+.+ +|+++ ++.++|.++|++.|--.+-
T Consensus 7 rRlVLDVlKPh~p~-i~d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE~~Gg~IHS 78 (97)
T 2raq_A 7 IRIVLDILKPHEPI-IPEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYGGSIHS 78 (97)
T ss_dssp EEEEEEEECCSCSC-HHHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHTTCEEEE
T ss_pred eEEEEEecCCCCCC-HHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEe
Confidence 3456666 443333 33566778899998887754 444444 44554 8999999999999965543
No 73
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=55.13 E-value=16 Score=26.78 Aligned_cols=35 Identities=26% Similarity=0.553 Sum_probs=24.7
Q ss_pred EEEEecCcChhh------HHHHHHHHhCCCCeeEEEEEcCC
Q 024084 96 TEYMVDMKCEGC------VDAVKQKLQTVTGVKNVEVDLSN 130 (272)
Q Consensus 96 v~~~VGM~C~~C------~~~VekaL~~l~GV~~v~Vdl~~ 130 (272)
+.+.+-+++.+| ...|+++|.+++||.+++|++..
T Consensus 44 V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~v~V~l~~ 84 (103)
T 1uwd_A 44 VKVLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVELTF 84 (103)
T ss_dssp EEEEECCSSSCCSSHHHHHHHHHHHHHTSSSCCEEEEEECC
T ss_pred EEEEEEECCCCCcHHHHHHHHHHHHHHhCCCcceEEEEEec
Confidence 445555555555 45688999999999998887443
No 74
>2j89_A Methionine sulfoxide reductase A; MSRA, poplar, oxidoreductase; 1.7A {Populus trichocarpa}
Probab=48.27 E-value=73 Score=27.83 Aligned_cols=46 Identities=30% Similarity=0.456 Sum_probs=33.0
Q ss_pred hhhHHHHHHHHhCCCCeeEEEEEcCCc-------------------EEEEEeC---CChhhhHHHHHh
Q 024084 105 EGCVDAVKQKLQTVTGVKNVEVDLSNQ-------------------VVRILGS---SPLKTMTEALEQ 150 (272)
Q Consensus 105 ~~C~~~VekaL~~l~GV~~v~Vdl~~~-------------------~v~V~~~---~~~~~I~~aI~~ 150 (272)
.+|-+-+|..+.+++||.++.+-...+ .|.|.+| ++.++|++..=+
T Consensus 101 gGCFWgvE~~F~~l~GV~~t~vGYaGG~t~nPTYeeVcsG~TGHaEaV~V~YDP~~ISy~~LL~~Fw~ 168 (261)
T 2j89_A 101 AGCFWGVELAFQRVPGVTKTEVGYTQGLLHNPTYEDVCTGTTNHNEVVRVQYDPKECSFDTLIDVLWA 168 (261)
T ss_dssp ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHTTCSCCEEEEEEEECTTTSCHHHHHHHHHH
T ss_pred cCCeeeeHHHHhhCCCeEEEEeeecCCCCCCCChhhcccCCCCCeEEEEEEECCCcCCHHHHHHHHHH
Confidence 456666777899999999999876543 3667766 577777776543
No 75
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=42.82 E-value=20 Score=26.67 Aligned_cols=35 Identities=31% Similarity=0.484 Sum_probs=24.8
Q ss_pred EEEEecCcChhh------HHHHHHHH-hCCCCeeEEEEEcCC
Q 024084 96 TEYMVDMKCEGC------VDAVKQKL-QTVTGVKNVEVDLSN 130 (272)
Q Consensus 96 v~~~VGM~C~~C------~~~VekaL-~~l~GV~~v~Vdl~~ 130 (272)
+.+.+-+++.+| ...|+.+| .+++||.+++|++.-
T Consensus 46 V~V~ltlt~p~cp~~~~i~~~i~~al~~~l~Gv~~V~V~l~~ 87 (108)
T 3lno_A 46 AVITMTMTSIGCPMAGQIVSDVKKVLSTNVPEVNEIEVNVVW 87 (108)
T ss_dssp EEEEECCSCTTCTTHHHHHHHHHHHHHHHCTTCCCEEEEECC
T ss_pred EEEEEEECCCCCcHHHHHHHHHHHHHHHhCCCCceEEEEEEe
Confidence 445555555555 56788889 899999988887544
No 76
>1pav_A Hypothetical protein TA1170/TA1414; structural genomics, structure, fast NMR, semiautomated analysis; NMR {Thermoplasma acidophilum} SCOP: d.68.3.3
Probab=38.25 E-value=15 Score=25.51 Aligned_cols=52 Identities=10% Similarity=0.153 Sum_probs=38.6
Q ss_pred EEEe-cCcChhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeC--CChhhhHHHHHhcccccee
Q 024084 97 EYMV-DMKCEGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGS--SPLKTMTEALEQTGRKARL 157 (272)
Q Consensus 97 ~~~V-GM~C~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~--~~~~~I~~aI~~~Gy~a~~ 157 (272)
++.. |+.|+.-.-+++++|++++. .+.+.|..+ ...+.|...++..||....
T Consensus 8 ~lD~rGl~CP~Pvl~~k~al~~l~~---------G~~L~V~~dd~~a~~di~~~~~~~G~~~~~ 62 (78)
T 1pav_A 8 VIDARGSYCPGPLMELIKAYKQAKV---------GEVISVYSTDAGTKKDAPAWIQKSGQELVG 62 (78)
T ss_dssp CCCBSSCSSCTTHHHHHHHHTTSCT---------TCCEECCBSSSCHHHHHHHHHHHHTEEECC
T ss_pred EEECCCCCCCHHHHHHHHHHHcCCC---------CCEEEEEECCccHHHHHHHHHHHCCCEEEE
Confidence 4778 99999999999999998843 223344333 3456788889999998765
No 77
>4gwb_A Peptide methionine sulfoxide reductase MSRA 3; structural genomics, protein structure initiative, nysgrc, R PSI-biology; 1.20A {Sinorhizobium meliloti}
Probab=35.63 E-value=66 Score=26.19 Aligned_cols=47 Identities=17% Similarity=0.297 Sum_probs=35.3
Q ss_pred hhhHHHHHHHHhCCCCeeEEEEEcCCc---------------EEEEEeC---CChhhhHHHHHhc
Q 024084 105 EGCVDAVKQKLQTVTGVKNVEVDLSNQ---------------VVRILGS---SPLKTMTEALEQT 151 (272)
Q Consensus 105 ~~C~~~VekaL~~l~GV~~v~Vdl~~~---------------~v~V~~~---~~~~~I~~aI~~~ 151 (272)
.+|-+-+|..+.+++||.++.+-..++ .|.|.++ ++.++|++..=+.
T Consensus 9 gGCFWg~E~~f~~l~GV~~t~~GYagG~~~nPtY~~v~~HaE~V~V~yDp~~isy~~LL~~F~~~ 73 (168)
T 4gwb_A 9 GGCFWGMQDLIRKLPGVIETRVGYTGGDVPNATYRNHGTHAEGIEIIFDPERISYRRILELFFQI 73 (168)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCTTCBTTBCTTCEEEEEEEECTTTCCHHHHHHHHHHH
T ss_pred ccCccchHHHHhcCCCeEEEEEEcCCCcCCCCcccccCceEEEEEEEECCCCCCHHHHHHHHHhh
Confidence 466777788899999999999977653 5667765 5778888766443
No 78
>2w7v_A General secretion pathway protein L; transport, type II secretion, transport protein; 2.30A {Vibrio parahaemolyticus}
Probab=35.02 E-value=1.2e+02 Score=22.16 Aligned_cols=66 Identities=20% Similarity=0.173 Sum_probs=42.6
Q ss_pred HHHHHHhCCCCee--EEEEEcCCcEEEEEe--C--CChhhhHHHHHhccccceeecCCCccchhhcceeeeecCCeeeeE
Q 024084 110 AVKQKLQTVTGVK--NVEVDLSNQVVRILG--S--SPLKTMTEALEQTGRKARLVGQGVPEDFLVSAAVAEFKGPDVFGV 183 (272)
Q Consensus 110 ~VekaL~~l~GV~--~v~Vdl~~~~v~V~~--~--~~~~~I~~aI~~~Gy~a~~~~~g~~~~~~~~~AvA~lkg~~v~G~ 183 (272)
.+..+|.+.|+++ .++.|-..+.+++.- . ...|.+.+.+.+ ||.++.-... -.++.|.|+
T Consensus 16 ~L~~~l~~vp~l~~~sLryD~~R~ELrlq~~A~dF~~~E~lr~~l~~-gf~Ve~Gs~~-------------~~~d~V~g~ 81 (95)
T 2w7v_A 16 ALPATLGQVKDLEITSFKYDGQRGEVRIHARSSDFQPFEQARVKLAE-KFNVEQGQLN-------------RSDNVVMGS 81 (95)
T ss_dssp GHHHHHHTSTTCEEEEEEEETTTTEEEEEEEESSSHHHHHHHHHHHT-TEEEEECCCE-------------EC-CCEEEE
T ss_pred HHHHHhccCCCceEEEEeecCCCCeEEEEEecCCHHHHHHHHHHhhc-CcEEehhhhc-------------cCCCeEEEE
Confidence 3556788888876 455555777777762 2 257788888866 9987753321 124468888
Q ss_pred EEEeee
Q 024084 184 VRLAQV 189 (272)
Q Consensus 184 v~f~q~ 189 (272)
+++...
T Consensus 82 l~lr~~ 87 (95)
T 2w7v_A 82 FVLKRQ 87 (95)
T ss_dssp EEEEEC
T ss_pred EEEchh
Confidence 887653
No 79
>1nwa_A Peptide methionine sulfoxide reductase MSRA; oxidoreductase, product complex, structural genomics, PSI, protein structure initiative; 1.50A {Mycobacterium tuberculosis} SCOP: d.58.28.1
Probab=27.84 E-value=1.1e+02 Score=25.78 Aligned_cols=46 Identities=24% Similarity=0.372 Sum_probs=33.7
Q ss_pred hhhHHHHHHHHhCCCCeeEEEEEcCC---------------cEEEEEeC---CChhhhHHHHHh
Q 024084 105 EGCVDAVKQKLQTVTGVKNVEVDLSN---------------QVVRILGS---SPLKTMTEALEQ 150 (272)
Q Consensus 105 ~~C~~~VekaL~~l~GV~~v~Vdl~~---------------~~v~V~~~---~~~~~I~~aI~~ 150 (272)
.+|-+-+|..+.+++||.++.+-... +.|.|.++ ++.++|++..=+
T Consensus 32 gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtYe~~G~HaEaV~V~yDp~~iSy~~LL~~Ff~ 95 (203)
T 1nwa_A 32 GGCFWGLQDLIRNQPGVVSTRVGYSGGNIPNATYRNHGTHAEAVEIIFDPTVTDYRTLLEFFFQ 95 (203)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCSSCCSSCCTTCEEEEEEEECTTTCCHHHHHHHHHH
T ss_pred cCCeeeeHHHHhcCCCeEEEEeeecCCCCCCCChhhcCCceEEEEEEECCCcCCHHHHHHHHHH
Confidence 45666677889999999999987654 45667766 577788776543
No 80
>1ff3_A Peptide methionine sulfoxide reductase; alpha beta roll, PMSR, MSRA, oxidoreductase; 1.90A {Escherichia coli} SCOP: d.58.28.1 PDB: 2gt3_A 2iem_A
Probab=27.00 E-value=93 Score=26.27 Aligned_cols=46 Identities=15% Similarity=0.224 Sum_probs=33.0
Q ss_pred hhhHHHHHHHHhCCCCeeEEEEEcCC-------------------cEEEEEeC---CChhhhHHHHHh
Q 024084 105 EGCVDAVKQKLQTVTGVKNVEVDLSN-------------------QVVRILGS---SPLKTMTEALEQ 150 (272)
Q Consensus 105 ~~C~~~VekaL~~l~GV~~v~Vdl~~-------------------~~v~V~~~---~~~~~I~~aI~~ 150 (272)
.+|-+-+|..+.+++||.++.+-... +.|.|.++ ++.++|++..=+
T Consensus 49 gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtY~~VcsG~TGHaEaV~V~yDp~~isy~~LL~~F~~ 116 (211)
T 1ff3_A 49 MGXFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWE 116 (211)
T ss_dssp CSSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHHH
T ss_pred cCCeEEehhhHhcCCCeEEEEeeecCCCCCCCChhhccCCCCCceEEEEEEECCCcCCHHHHHHHHHH
Confidence 34555667778999999999987663 34667766 577788776644
No 81
>1fvg_A Peptide methionine sulfoxide reductase; oxidoreductase; 1.60A {Bos taurus} SCOP: d.58.28.1 PDB: 1fva_A 2l90_A*
Probab=26.48 E-value=2.8e+02 Score=23.06 Aligned_cols=46 Identities=22% Similarity=0.385 Sum_probs=33.0
Q ss_pred hhhHHHHHHHHhCCCCeeEEEEEcCCc-------------------EEEEEeC---CChhhhHHHHHh
Q 024084 105 EGCVDAVKQKLQTVTGVKNVEVDLSNQ-------------------VVRILGS---SPLKTMTEALEQ 150 (272)
Q Consensus 105 ~~C~~~VekaL~~l~GV~~v~Vdl~~~-------------------~v~V~~~---~~~~~I~~aI~~ 150 (272)
.+|-+-+|..+.+++||.++.+-...+ .|.|.++ ++.++|++..=+
T Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~nPtY~~Vcsg~TGHaEaV~V~yDp~~isy~~LL~~F~~ 117 (199)
T 1fvg_A 50 MGCFWGAERKFWTLKGVYSTQVGFAGGYTPNPTYKEVCSGKTGHAEVVRVVFQPEHISFEELLKVFWE 117 (199)
T ss_dssp ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHHH
T ss_pred cCCeeeeHHHHhhCCCeEEEEeeccCCCCCCCChhheecCCCCCeEEEEEEECCCcCCHHHHHHHHHH
Confidence 456666677799999999999876543 3666665 577788776644
No 82
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=24.22 E-value=2e+02 Score=20.72 Aligned_cols=46 Identities=11% Similarity=0.220 Sum_probs=30.0
Q ss_pred hhhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEe-CCChhhhHHHHHh
Q 024084 105 EGCVDAVKQKLQTVTGVKNVEVDLSNQVVRILG-SSPLKTMTEALEQ 150 (272)
Q Consensus 105 ~~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~-~~~~~~I~~aI~~ 150 (272)
+.=...|.+.|.+++|+.-..++-..+++.|.- ..+.+++.+.|++
T Consensus 16 p~~~~~V~~~L~~ipgvEi~~~~~~~GkiVV~iEa~~~~~l~~~i~~ 62 (95)
T 2jsx_A 16 SERISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIES 62 (95)
T ss_dssp TTSHHHHHHHHTTSTTEEEEEEETTTTEEEEEEEESSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHCCCCeEEEEecCCCCCEEEEEEeCCHHHHHHHHHH
Confidence 344778999999999995444555556666553 3456666665543
No 83
>1owx_A Lupus LA protein, SS-B, LA; RRM, transcription; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=23.93 E-value=1.8e+02 Score=22.08 Aligned_cols=56 Identities=9% Similarity=-0.009 Sum_probs=44.4
Q ss_pred EEEEe-cCcCh-hhHHHHHHHHhCCCCeeEEEEEcCCcEEEEEeCCChhhhHHHHHhc
Q 024084 96 TEYMV-DMKCE-GCVDAVKQKLQTVTGVKNVEVDLSNQVVRILGSSPLKTMTEALEQT 151 (272)
Q Consensus 96 v~~~V-GM~C~-~C~~~VekaL~~l~GV~~v~Vdl~~~~v~V~~~~~~~~I~~aI~~~ 151 (272)
..+.| |.... .+...|+..+++...|..|++.....+..|....++++-.++++++
T Consensus 19 ~il~v~~l~~~~~sredLke~F~~~G~V~~Vd~~~g~~tgfVrf~~~~~~A~~av~~l 76 (121)
T 1owx_A 19 CLLKFSGDLDDQTCREDLHILFSNHGEIKWIDFVRGAKEGIILFKEKAKEALGKAKDA 76 (121)
T ss_dssp CEEEEEESCCSSCCHHHHHHHTCSSCCEEEEECCTTCSEEEEEESSCHHHHHHHHHHT
T ss_pred eEEEEecCCCCcCCHHHHHHHHHhcCCEEEEEEecCCCEEEEEECCChHHHHHHHHHh
Confidence 45777 77777 7899999999999889999998888889999875455666666653
No 84
>3bqh_A PILB, peptide methionine sulfoxide reductase MSRA/MSRB; methionine sulfoxide reductase A, oxidized form, elect transport; 1.95A {Neisseria meningitidis} PDB: 3bqe_A 3bqf_A* 3bqg_A
Probab=21.01 E-value=1.8e+02 Score=24.14 Aligned_cols=47 Identities=17% Similarity=0.287 Sum_probs=33.3
Q ss_pred hhhHHHHHHHHhCCCCeeEEEEEcCCc-------------------EEEEEeC---CChhhhHHHHHhc
Q 024084 105 EGCVDAVKQKLQTVTGVKNVEVDLSNQ-------------------VVRILGS---SPLKTMTEALEQT 151 (272)
Q Consensus 105 ~~C~~~VekaL~~l~GV~~v~Vdl~~~-------------------~v~V~~~---~~~~~I~~aI~~~ 151 (272)
.+|-+-+|..+.+++||.++.+-...+ .|.|.++ ++.++|++..=+.
T Consensus 9 gGCFWg~E~~F~~~~GV~~t~vGYagG~~~nPtY~~Vc~g~tGHaEaV~V~yDp~~isy~~LL~~f~~~ 77 (193)
T 3bqh_A 9 GGCFWGLEAYFQRIDGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYFFRV 77 (193)
T ss_dssp ESCHHHHHHHHHTSTTEEEEEEEEESCSSSSCCHHHHHHSCCCCEEEEEEEEETTTCCHHHHHHHHHHH
T ss_pred cCCeeehHHHHhcCCCEEEEEEeccCCcCCCCChheeecCCCCCeEEEEEEECCCcCCHHHHHHHHHHh
Confidence 356666777899999999999876543 3566665 5777887765443
Done!