BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024087
(272 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255543679|ref|XP_002512902.1| amino acid binding protein, putative [Ricinus communis]
gi|223547913|gb|EEF49405.1| amino acid binding protein, putative [Ricinus communis]
Length = 443
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/270 (75%), Positives = 229/270 (84%), Gaps = 2/270 (0%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEYAKLIRRMNPPRVVIDN+ C DATVI+VDSVNKHGILLQV+QVL D+NLVIKKAYI
Sbjct: 1 MDDEYAKLIRRMNPPRVVIDNDVCEDATVIQVDSVNKHGILLQVVQVLTDMNLVIKKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNVID DG KIRDKEVI YIQ+RLE++ASFAPSLR SVGVMP+E+HTSIE
Sbjct: 61 SSDGGWFMDVFNVIDQDGNKIRDKEVIGYIQRRLESNASFAPSLRGSVGVMPSEDHTSIE 120
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
+G DRPGL SEVCAVLADL CNVVNAEIWTHN RAAAVVHVTD STG A+KDPKRLSTI
Sbjct: 121 LSGNDRPGLLSEVCAVLADLRCNVVNAEIWTHNARAAAVVHVTDDSTGCAVKDPKRLSTI 180
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEK-AVGRVEDKSSR 239
KELL NVL+G +D + AK +LSPPGI +RERRLHQIMF DRDYERV++ +GR+EDKSSR
Sbjct: 181 KELLCNVLKGNNDLKAAKMTLSPPGITSRERRLHQIMFADRDYERVDRVGLGRLEDKSSR 240
Query: 240 PQTCSMLCFMEWSTQEGRKLIR-NFIFDML 268
P + ++S R R +FD++
Sbjct: 241 PHVTVLNIEKDYSVITMRSKDRPKLLFDIV 270
>gi|224143611|ref|XP_002336061.1| predicted protein [Populus trichocarpa]
gi|222869846|gb|EEF06977.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/242 (80%), Positives = 218/242 (90%), Gaps = 1/242 (0%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MD+EYAKLIRR+NPPRVVIDN+ C +ATVI+VDSVNKHGILL+V+QVL D+NLVI KAYI
Sbjct: 1 MDEEYAKLIRRLNPPRVVIDNDACEEATVIQVDSVNKHGILLKVVQVLTDMNLVITKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDG WFMDVFNV+D DGKKIRDKEV+DYIQ+RLE++ASFAPSLR SVGVMP+EEHT+IE
Sbjct: 61 SSDGDWFMDVFNVVDQDGKKIRDKEVMDYIQRRLESNASFAPSLRGSVGVMPSEEHTAIE 120
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TGTDRPGL SEVCAVL DLHCNVVNAEIWTHN RAAAVVHVTD STG AIKDPKRLSTI
Sbjct: 121 LTGTDRPGLLSEVCAVLTDLHCNVVNAEIWTHNTRAAAVVHVTDDSTGCAIKDPKRLSTI 180
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA-VGRVEDKSSR 239
+ELL NVL+G DD + A T+LSPPG+ +RERRLHQIMF DRDYERVE+A + R EDKSSR
Sbjct: 181 RELLCNVLKGNDDSKTATTTLSPPGVTSRERRLHQIMFADRDYERVERAGLARFEDKSSR 240
Query: 240 PQ 241
P
Sbjct: 241 PH 242
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 13/155 (8%)
Query: 26 DATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKE 85
D TV+ + S ++ +L ++ L D+ V+ +S+ F + DG +
Sbjct: 251 DYTVVSMRSKDRPKLLFDIVCTLTDMEYVVFHGMVSTGRMEAYQEFYIRHVDGLPVSSDA 310
Query: 86 VIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVV 145
+ + Q LE A R+S G+ +E DR GL S++ + + +
Sbjct: 311 ERERVVQCLEA----AIERRASEGL-------ELELCTEDRVGLLSDITRIFRENSLCIK 359
Query: 146 NAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
AEI T +A +VTD TG + DPK + +I
Sbjct: 360 RAEILTKGGKAKDTFYVTD-VTGNPV-DPKIIDSI 392
>gi|224055763|ref|XP_002298641.1| predicted protein [Populus trichocarpa]
gi|222845899|gb|EEE83446.1| predicted protein [Populus trichocarpa]
Length = 441
Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/244 (79%), Positives = 218/244 (89%), Gaps = 3/244 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MD+EYAKLIRR+NPPRVVIDN+ C +ATVI+VDSVNKHGILL+V+QVL D+NLVI KAYI
Sbjct: 1 MDEEYAKLIRRLNPPRVVIDNDACEEATVIQVDSVNKHGILLKVVQVLTDMNLVITKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ--RLETDASFAPSLRSSVGVMPTEEHTS 118
SSDG WFMDVFNV+D DGKKIRDKEV+DYIQ+ RLE++ASFAPSLR SVGVMP+EEHT+
Sbjct: 61 SSDGDWFMDVFNVVDQDGKKIRDKEVMDYIQRVRRLESNASFAPSLRGSVGVMPSEEHTA 120
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
IE TGTDRPGL SEVCAVL DLHCNVVNAEIWTHN RAAAVVHVTD STG AIKDPKRLS
Sbjct: 121 IELTGTDRPGLLSEVCAVLTDLHCNVVNAEIWTHNTRAAAVVHVTDDSTGCAIKDPKRLS 180
Query: 179 TIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA-VGRVEDKS 237
TI+ELL NVL+G DD + A T+LSPPG+ +RERRLHQIMF DRDYERVE+A + R EDKS
Sbjct: 181 TIRELLCNVLKGNDDSKTATTTLSPPGVTSRERRLHQIMFADRDYERVERAGLARFEDKS 240
Query: 238 SRPQ 241
SRP
Sbjct: 241 SRPH 244
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 13/155 (8%)
Query: 26 DATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKE 85
D TV+ + S ++ +L ++ L D+ V+ +S+ F + DG +
Sbjct: 253 DYTVVSMRSKDRPKLLFDIVCTLTDMEYVVFHGMVSTGRMEAYQEFYIRHVDGLPVSSDA 312
Query: 86 VIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVV 145
+ + Q LE A R+S G+ +E DR GL S++ + + +
Sbjct: 313 ERERVVQCLEA----AIERRASEGL-------ELELCTEDRVGLLSDITRIFRENSLCIK 361
Query: 146 NAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
AEI T +A +VTD TG + DPK + +I
Sbjct: 362 RAEILTKGGKAKDTFYVTD-VTGNPV-DPKIIDSI 394
>gi|356561659|ref|XP_003549097.1| PREDICTED: uncharacterized protein LOC100818506 [Glycine max]
Length = 445
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/241 (76%), Positives = 209/241 (86%), Gaps = 1/241 (0%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEYAKLIRRMNPPRVVIDNN C +ATVI+VDSVNKHGILL V+QV++D+NLVI KAYI
Sbjct: 1 MDDEYAKLIRRMNPPRVVIDNNACENATVIQVDSVNKHGILLDVVQVISDMNLVITKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSD WFMDVFNVID +G KIRDKEVIDYIQ+RLE + SFAPSLR SVGV+PTEEHT IE
Sbjct: 61 SSDAVWFMDVFNVIDHNGNKIRDKEVIDYIQRRLENNPSFAPSLRESVGVVPTEEHTVIE 120
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TGTDRPGL SE+CAVL DLHCNVV AEIWTHN RAAAVVHVTD S+G AIKDP RLSTI
Sbjct: 121 LTGTDRPGLLSEICAVLTDLHCNVVTAEIWTHNTRAAAVVHVTDDSSGCAIKDPSRLSTI 180
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA-VGRVEDKSSR 239
++LL NVLRG +D + A+T+LSPPG+ NR+RRLHQIMF DRDYER+E+A G + D+ R
Sbjct: 181 RDLLSNVLRGSNDPKTARTTLSPPGVTNRDRRLHQIMFADRDYERIERAGRGGLRDRDKR 240
Query: 240 P 240
P
Sbjct: 241 P 241
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 13/167 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + + D TV+ + + ++ +L ++ L D+ V+ + + F +
Sbjct: 243 PHVTVVDCVEKDYTVVTMRAQDRPKLLFDIVCTLTDMQYVVFHGVVKTLRTEAFQEFYIR 302
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG I + + + Q LE A R+S G+ +E DR GL S++
Sbjct: 303 HVDGFPISSEAERERLVQCLEA----AIERRASEGM-------ELELCTEDRVGLLSDIT 351
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
+ + + AEI T +A +VTD TG + DPK + +I+
Sbjct: 352 RIFRENSLCIKRAEISTEEGKARDTFYVTD-VTGNPV-DPKIIDSIR 396
>gi|225451503|ref|XP_002272024.1| PREDICTED: uncharacterized protein LOC100248040 [Vitis vinifera]
gi|296082319|emb|CBI21324.3| unnamed protein product [Vitis vinifera]
Length = 440
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/249 (74%), Positives = 211/249 (84%), Gaps = 3/249 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEYAKLIRRMNPPRVVIDN+ +ATVI+VDSVNKHGILL+V+QVL D+NLVI KAYI
Sbjct: 1 MDDEYAKLIRRMNPPRVVIDNDASEEATVIQVDSVNKHGILLEVVQVLTDMNLVITKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV+D DG KIRDK VI+YI + LE DASF P +R +VGVMP+E+HTSIE
Sbjct: 61 SSDGGWFMDVFNVVDGDGNKIRDKGVINYITKTLERDASFVPPMRGTVGVMPSEDHTSIE 120
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
+GTDRPGL SEVCAVLADLHCNVVNAEIWTHN RAAAVVHVTD STG AI+DP RLS I
Sbjct: 121 LSGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTDDSTGCAIEDPNRLSKI 180
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA-VGRVEDKSSR 239
KELL NVL+G +D + AK +LSPPG +RERRLHQIMF DRDY+RVE+A +G+ DKSSR
Sbjct: 181 KELLCNVLKGNNDLKTAKMTLSPPGFTHRERRLHQIMFADRDYQRVERAELGK--DKSSR 238
Query: 240 PQTCSMLCF 248
P + C
Sbjct: 239 PHVTVLDCI 247
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 30 IKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDY 89
+++ + ++ G+L + +V + +L IK+A IS++GG D F V D G + + ++ID
Sbjct: 332 LELRTEDRFGLLSDITRVFRENSLCIKRAEISTEGGKAKDTFYVTDVTGNPV-NPQIIDS 390
Query: 90 IQQRL 94
I+Q++
Sbjct: 391 IRQQI 395
>gi|356571573|ref|XP_003553951.1| PREDICTED: uncharacterized protein LOC100801859 [Glycine max]
Length = 445
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/242 (76%), Positives = 208/242 (85%), Gaps = 3/242 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEYAKLIRRMNPPRVVIDNN C +ATVI+VDSVNKHGILL V+QV++D+NLVI KAYI
Sbjct: 1 MDDEYAKLIRRMNPPRVVIDNNACENATVIQVDSVNKHGILLDVVQVISDMNLVITKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDG WFMDVFNVID G KIRDKEVIDYIQ+RLE + SF PSLR SVGV+PTEEHT IE
Sbjct: 61 SSDGVWFMDVFNVIDHKGNKIRDKEVIDYIQRRLENNPSFVPSLRESVGVVPTEEHTVIE 120
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TGTDRPGL SE+CAVL DLHCNVV AEIWTHN RAAAVVHVTD S+G AIKDP RLSTI
Sbjct: 121 LTGTDRPGLLSEICAVLTDLHCNVVTAEIWTHNTRAAAVVHVTDDSSGCAIKDPSRLSTI 180
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVE--DKSS 238
++LL NVLRG +D + A+T+LSP G+ NR+RRLHQIMF DRDYER+E+A G+ E D+
Sbjct: 181 RDLLSNVLRGSNDPKTARTTLSPHGVTNRDRRLHQIMFADRDYERIERA-GQEELRDRDK 239
Query: 239 RP 240
RP
Sbjct: 240 RP 241
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 71/167 (42%), Gaps = 13/167 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + + D TV+ + + ++ +L ++ L D+ V+ + + F +
Sbjct: 243 PHVTVGDCVEKDYTVVTMRAQDRPKLLFDIVCTLTDMQYVVFHGVVKTLRMEAFQEFYIR 302
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG I + + + Q LE A R+S G+ +E DR GL S++
Sbjct: 303 HVDGFPISSEAERERLMQCLEA----AIERRASEGM-------GLELCTEDRVGLLSDIT 351
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
+ + AEI T +A +VTD TG + DPK + +I+
Sbjct: 352 RTFRENSLCIKRAEISTEEGKARDTFYVTD-VTGNPV-DPKIIDSIR 396
>gi|357503685|ref|XP_003622131.1| Amino acid binding protein, putative [Medicago truncatula]
gi|355497146|gb|AES78349.1| Amino acid binding protein, putative [Medicago truncatula]
Length = 442
Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/247 (74%), Positives = 205/247 (82%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEYAKLIRRMNPPRVVIDNN C +ATVI+VDSVNKHGILL V+QV++D+NLVIKKAYI
Sbjct: 1 MDDEYAKLIRRMNPPRVVIDNNACENATVIQVDSVNKHGILLDVVQVISDMNLVIKKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDG WFMDVFNV D +G KI+DKEVIDYIQ+RLE + SF S+R SVGV+PTEEHT IE
Sbjct: 61 SSDGVWFMDVFNVTDRNGNKIKDKEVIDYIQRRLEKNPSFETSMRESVGVVPTEEHTVIE 120
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TGTDRPGL SE+CAVLADL CNVV AEIWTHN RAAAVVHVTD S+G AI+DP RLSTI
Sbjct: 121 LTGTDRPGLLSEICAVLADLRCNVVTAEIWTHNTRAAAVVHVTDDSSGCAIEDPSRLSTI 180
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
++LL NVLRG DD + AKT+LS PG+ R+RRLHQIMF DRDYERVE+A R DK P
Sbjct: 181 RDLLCNVLRGSDDPKTAKTALSHPGVTYRDRRLHQIMFADRDYERVERAGLRERDKGPFP 240
Query: 241 QTCSMLC 247
C
Sbjct: 241 HVTVSDC 247
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 17/189 (8%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + + T D TV+ + + ++ +L ++ L D+ V+ + ++ F +
Sbjct: 240 PHVTVSDCTERDYTVVIMRAKDRPKLLFDIVCTLTDMQYVVFHGVVQTERTGAYQEFYIR 299
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG I + + + Q LE A R+S G+ +E DR GL S++
Sbjct: 300 HVDGFPISSEAERERLIQCLEA----AIERRASEGM-------ELELCTEDRVGLLSDIT 348
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDF 194
+ + + AEI T N +A +VTD TG + DPK + +I+ + + +
Sbjct: 349 RIFRENSLCIKRAEISTENGKAKDTFYVTD-VTGNPV-DPKSIDSIRRQIGDTVLQV--- 403
Query: 195 RKAKTSLSP 203
K +SLSP
Sbjct: 404 -KHNSSLSP 411
>gi|449490057|ref|XP_004158495.1| PREDICTED: uncharacterized protein LOC101225681 [Cucumis sativus]
Length = 440
Score = 369 bits (946), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 178/247 (72%), Positives = 205/247 (82%), Gaps = 2/247 (0%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MD+EY KLIRR+NPPRVVIDNN C DATVI+VDS+NKHGILL+V+QVL D+NL+I KAYI
Sbjct: 1 MDNEYDKLIRRLNPPRVVIDNNACKDATVIQVDSMNKHGILLKVVQVLMDMNLIITKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNVI +G KIRD+EVI+ IQ RLE ASF PSLR SVGVMP+E+HTSIE
Sbjct: 61 SSDGGWFMDVFNVITYEGNKIRDQEVINAIQMRLE--ASFVPSLRESVGVMPSEDHTSIE 118
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
+GTDRPGL SEVCAVLADLHCNVVNA++WTHN+RAAAVVHVTD +TG AI DP+RL TI
Sbjct: 119 LSGTDRPGLLSEVCAVLADLHCNVVNADVWTHNNRAAAVVHVTDDATGRAINDPQRLLTI 178
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
KELL NVLRG + ++AK +LSPPG+ + +RRLHQIM DRDYER K VEDK+ RP
Sbjct: 179 KELLCNVLRGNGELKEAKMTLSPPGVTSTDRRLHQIMLADRDYERAVKTKLEVEDKNLRP 238
Query: 241 QTCSMLC 247
C
Sbjct: 239 HVTVFDC 245
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 13/168 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + + T D T+I + ++ +L V+ L D+ V+ + + F +
Sbjct: 238 PHVTVFDCTEKDYTLITTRTRDRPKLLFDVLCTLTDMEYVVFHGMVETGRMEAFLEFYIR 297
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG I K D + LE A R S G+ +E DR GL S++
Sbjct: 298 HKDGLPISSKAERDRVLHCLEA----AIERRESEGL-------KLELCAEDRVGLLSDIT 346
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
+ + + AEI T +A + +VTD TG I D K + +I++
Sbjct: 347 RIFRENSLCIRRAEIATKRGKAKDIFYVTD-MTGTTI-DAKVVESIRK 392
>gi|449441712|ref|XP_004138626.1| PREDICTED: uncharacterized protein LOC101213097 [Cucumis sativus]
Length = 445
Score = 369 bits (946), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 178/247 (72%), Positives = 205/247 (82%), Gaps = 2/247 (0%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MD+EY KLIRR+NPPRVVIDNN C DATVI+VDS+NKHGILL+V+QVL D+NL+I KAYI
Sbjct: 1 MDNEYDKLIRRLNPPRVVIDNNACKDATVIQVDSMNKHGILLKVVQVLMDMNLIITKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNVI +G KIRD+EVI+ IQ RLE ASF PSLR SVGVMP+E+HTSIE
Sbjct: 61 SSDGGWFMDVFNVITYEGNKIRDQEVINAIQMRLE--ASFVPSLRESVGVMPSEDHTSIE 118
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
+GTDRPGL SEVCAVLADLHCNVVNA++WTHN+RAAAVVHVTD +TG AI DP+RL TI
Sbjct: 119 LSGTDRPGLLSEVCAVLADLHCNVVNADVWTHNNRAAAVVHVTDDATGRAINDPQRLLTI 178
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
KELL NVLRG + ++AK +LSPPG+ + +RRLHQIM DRDYER K VEDK+ RP
Sbjct: 179 KELLCNVLRGNGELKEAKMTLSPPGVTSTDRRLHQIMLADRDYERAVKTKLEVEDKNLRP 238
Query: 241 QTCSMLC 247
C
Sbjct: 239 HVTVFDC 245
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 18/173 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS---DGGWFMDV- 70
P V + + T D T+I + ++ +L V+ L D+ V+ + + + W
Sbjct: 238 PHVTVFDCTEKDYTLITTRTRDRPKLLFDVLCTLTDMEYVVFHGMVETGRMEENWSFSFQ 297
Query: 71 -FNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGL 129
F + DG I K D + LE A R S G+ +E DR GL
Sbjct: 298 EFYIRHKDGLPISSKAERDRVLHCLEA----AIERRESEGL-------KLELCAEDRVGL 346
Query: 130 FSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
S++ + + + AEI T +A + +VTD TG I D K + +I++
Sbjct: 347 LSDITRIFRENSLCIRRAEIATKRGKAKDIFYVTD-MTGTTI-DAKVVESIRK 397
>gi|357503687|ref|XP_003622132.1| Amino acid binding protein, putative [Medicago truncatula]
gi|355497147|gb|AES78350.1| Amino acid binding protein, putative [Medicago truncatula]
Length = 475
Score = 355 bits (910), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 183/280 (65%), Positives = 205/280 (73%), Gaps = 33/280 (11%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEYAKLIRRMNPPRVVIDNN C +ATVI+VDSVNKHGILL V+QV++D+NLVIKKAYI
Sbjct: 1 MDDEYAKLIRRMNPPRVVIDNNACENATVIQVDSVNKHGILLDVVQVISDMNLVIKKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ---------------------------- 92
SSDG WFMDVFNV D +G KI+DKEVIDYIQ+
Sbjct: 61 SSDGVWFMDVFNVTDRNGNKIKDKEVIDYIQRVGSCLFAISRMLQLTLIYVARSLWKGDF 120
Query: 93 -----RLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNA 147
RLE + SF S+R SVGV+PTEEHT IE TGTDRPGL SE+CAVLADL CNVV A
Sbjct: 121 TVLYHRLEKNPSFETSMRESVGVVPTEEHTVIELTGTDRPGLLSEICAVLADLRCNVVTA 180
Query: 148 EIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
EIWTHN RAAAVVHVTD S+G AI+DP RLSTI++LL NVLRG DD + AKT+LS PG+
Sbjct: 181 EIWTHNTRAAAVVHVTDDSSGCAIEDPSRLSTIRDLLCNVLRGSDDPKTAKTALSHPGVT 240
Query: 208 NRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQTCSMLC 247
R+RRLHQIMF DRDYERVE+A R DK P C
Sbjct: 241 YRDRRLHQIMFADRDYERVERAGLRERDKGPFPHVTVSDC 280
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 17/189 (8%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + + T D TV+ + + ++ +L ++ L D+ V+ + ++ F +
Sbjct: 273 PHVTVSDCTERDYTVVIMRAKDRPKLLFDIVCTLTDMQYVVFHGVVQTERTGAYQEFYIR 332
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG I + + + Q LE A R+S G+ +E DR GL S++
Sbjct: 333 HVDGFPISSEAERERLIQCLEA----AIERRASEGM-------ELELCTEDRVGLLSDIT 381
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDF 194
+ + + AEI T N +A +VTD TG + DPK + +I+ + + +
Sbjct: 382 RIFRENSLCIKRAEISTENGKAKDTFYVTD-VTGNPV-DPKSIDSIRRQIGDTVLQV--- 436
Query: 195 RKAKTSLSP 203
K +SLSP
Sbjct: 437 -KHNSSLSP 444
>gi|225456388|ref|XP_002280377.1| PREDICTED: uncharacterized protein LOC100256112 [Vitis vinifera]
gi|297734456|emb|CBI15703.3| unnamed protein product [Vitis vinifera]
Length = 440
Score = 350 bits (898), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 169/249 (67%), Positives = 201/249 (80%), Gaps = 6/249 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEYAKLIRRMNPPRVVIDN++C ATVI+VDS N+HGILLQV+QVL D+NL+I KAYI
Sbjct: 1 MDDEYAKLIRRMNPPRVVIDNDSCGHATVIEVDSANRHGILLQVVQVLTDLNLIITKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG K+RD+E+++Y+Q+ LET+A F SLR SVGVMP++E TSIE
Sbjct: 61 SSDGGWFMDVFNVTDHDGNKLRDEEILNYLQKTLETEAGFLNSLRGSVGVMPSKEDTSIE 120
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG+DRPGL SEV AVL DL CNVVNAEIWTHN RAAAV+HVTD +TG AI+DPKRLS I
Sbjct: 121 LTGSDRPGLLSEVSAVLTDLRCNVVNAEIWTHNARAAAVIHVTDQATGCAIEDPKRLSMI 180
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPG--IMNRERRLHQIMFDDRDYERVEKAVGRVEDKSS 238
K+ L NV +G FR K ++S PG MNR+RRLHQ+MF RD+ER+E V+DK+S
Sbjct: 181 KKRLGNVFKGNSSFRTPKMTISSPGPVAMNRDRRLHQMMFAARDFERLEY----VQDKNS 236
Query: 239 RPQTCSMLC 247
RP + C
Sbjct: 237 RPHVTVLDC 245
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 26 DATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKE 85
+ V+++ + ++ G+L V +V + L IK+A I++ G D F V D G + D +
Sbjct: 327 EGLVLELSTEDRFGLLSDVTRVFRENGLCIKRAVITTKCGKAKDTFFVTDVSGNTV-DSK 385
Query: 86 VIDYIQQ-------RLETDASFAPSL 104
++ I+Q R++ + +F+P L
Sbjct: 386 TVEMIRQQIGQTILRVKGNLNFSPKL 411
>gi|147858899|emb|CAN80840.1| hypothetical protein VITISV_043834 [Vitis vinifera]
Length = 440
Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 168/249 (67%), Positives = 200/249 (80%), Gaps = 6/249 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEYAKLIRRMNPPRVVIDN++C ATVI+VDS N+HGILLQV+QVL D+NL+I KAYI
Sbjct: 1 MDDEYAKLIRRMNPPRVVIDNDSCGHATVIEVDSANRHGILLQVVQVLTDLNLIITKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG K+RD+E+++Y+Q+ LET+A F SLR SVGVMP++E TSIE
Sbjct: 61 SSDGGWFMDVFNVTDHDGNKLRDEEILNYLQKTLETEAGFLNSLRGSVGVMPSKEDTSIE 120
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG+DRPGL SEV AVL DL CNVVNAEIWTHN RAAAV+HVTD +TG AI+DPKRLS I
Sbjct: 121 LTGSDRPGLLSEVSAVLTDLRCNVVNAEIWTHNXRAAAVIHVTDQATGCAIEDPKRLSMI 180
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPG--IMNRERRLHQIMFDDRDYERVEKAVGRVEDKSS 238
K+ L NV +G FR K ++S PG MNR+RRLHQ+MF RD+ER+E A +D +S
Sbjct: 181 KKRLGNVFKGNSSFRTPKMTISSPGPVAMNRDRRLHQMMFAARDFERLEYA----QDTNS 236
Query: 239 RPQTCSMLC 247
RP + C
Sbjct: 237 RPHVTVLDC 245
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 26 DATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKE 85
+ V+++ + ++ G+L V +V + L IK+A I++ G D F V D G + D +
Sbjct: 327 EGLVLELSTEDRFGLLSDVTRVFRENGLCIKRAVITTKCGKAKDTFFVTDVSGNXV-DSK 385
Query: 86 VIDYIQQ-------RLETDASFAPSL 104
++ I+Q R++ + +F+P L
Sbjct: 386 TVEMIRQQIGQTILRVKGNLNFSPKL 411
>gi|15232835|ref|NP_186848.1| ACT domain-containing protein 6 [Arabidopsis thaliana]
gi|6513932|gb|AAF14836.1|AC011664_18 unknown protein [Arabidopsis thaliana]
gi|22138102|gb|AAM93431.1| ACR6 [Arabidopsis thaliana]
gi|26451489|dbj|BAC42843.1| unknown protein [Arabidopsis thaliana]
gi|28973303|gb|AAO63976.1| unknown protein [Arabidopsis thaliana]
gi|332640226|gb|AEE73747.1| ACT domain-containing protein 6 [Arabidopsis thaliana]
Length = 433
Score = 347 bits (889), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 181/269 (67%), Positives = 206/269 (76%), Gaps = 7/269 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEYAKLIRRMNPPRVVIDNN DATVI+VDSVNKHG LL+V+QVL D+NLVIKKAYIS
Sbjct: 3 DDEYAKLIRRMNPPRVVIDNNASDDATVIQVDSVNKHGTLLEVVQVLTDMNLVIKKAYIS 62
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDAS-FAPSLRSSVGVMPTEEHTSIE 120
SDGGWFMDVF VID DG KIRD +V+DYIQ+R+E++A F P LRSSVGVMPT+E+TSIE
Sbjct: 63 SDGGWFMDVFKVIDQDGNKIRDTQVLDYIQKRIESNAGWFIPPLRSSVGVMPTDEYTSIE 122
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
GTDRPGL SEV AVL DLHCNVVNAEIWTHN RAAAV+HVTD+ST AI DP RLSTI
Sbjct: 123 LAGTDRPGLLSEVSAVLTDLHCNVVNAEIWTHNTRAAAVIHVTDNSTHSAITDPIRLSTI 182
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
KELL NV+R R AKT S +RERRLHQIMFDDRDYE V++A +SRP
Sbjct: 183 KELLCNVVRTNSGSRAAKTVFSCSD-THRERRLHQIMFDDRDYEGVKRA----RTSASRP 237
Query: 241 QTCSMLCFMEWSTQEGRKLIR-NFIFDML 268
M +++ R R +FD++
Sbjct: 238 SVTLMNIEKDYTVVTMRSKDRPKLVFDVV 266
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 11/143 (7%)
Query: 22 NTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKI 81
N D TV+ + S ++ ++ V+ L D+ V+ +S++ F + DG I
Sbjct: 243 NIEKDYTVVTMRSKDRPKLVFDVVCTLTDMQYVVFHGMVSTEPVEAYQEFYIRHVDGLPI 302
Query: 82 RDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLH 141
+ + + Q LE A R+S G+ +E + DR GL S++ +
Sbjct: 303 NSEAEQERVIQCLEA----AIERRASEGL-------ELELSAEDRVGLLSDITRTFRENS 351
Query: 142 CNVVNAEIWTHNDRAAAVVHVTD 164
+V AEI T +A +VTD
Sbjct: 352 LTIVRAEISTREGKAKDTFYVTD 374
>gi|297832736|ref|XP_002884250.1| hypothetical protein ARALYDRAFT_477311 [Arabidopsis lyrata subsp.
lyrata]
gi|297330090|gb|EFH60509.1| hypothetical protein ARALYDRAFT_477311 [Arabidopsis lyrata subsp.
lyrata]
Length = 442
Score = 344 bits (883), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 179/269 (66%), Positives = 204/269 (75%), Gaps = 7/269 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEYAKLIRRMNPPRVVIDNN DATVI+VDSVNKHG LL+V+QVL D+NLVIKKAYIS
Sbjct: 3 DDEYAKLIRRMNPPRVVIDNNASDDATVIQVDSVNKHGTLLEVVQVLTDMNLVIKKAYIS 62
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDAS-FAPSLRSSVGVMPTEEHTSIE 120
SDGGWFMDVF VID DG KIRD +V+DYIQ+R+E++A F P LRSSVGVMPT+E+T+IE
Sbjct: 63 SDGGWFMDVFKVIDQDGNKIRDTQVLDYIQRRIESNAGWFIPPLRSSVGVMPTDEYTAIE 122
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
GTDRPGL SEV AVL DLHCNVVNAEIWTHN RAAAV+HVTD+ T AI DP RLSTI
Sbjct: 123 LAGTDRPGLLSEVSAVLTDLHCNVVNAEIWTHNTRAAAVIHVTDNLTNSAITDPIRLSTI 182
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
KELL NV+R R AKT S +RERRLHQIMFDDRDYE V R + +SRP
Sbjct: 183 KELLCNVVRTNSGSRAAKTVFSCSD-THRERRLHQIMFDDRDYE----GVKRAKTSASRP 237
Query: 241 QTCSMLCFMEWSTQEGRKLIR-NFIFDML 268
M +++ R R +FD++
Sbjct: 238 SVTLMNIEKDYTVVTMRSKDRPKLVFDVV 266
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 11/143 (7%)
Query: 22 NTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKI 81
N D TV+ + S ++ ++ V+ L D+ V+ +S++ F + DG I
Sbjct: 243 NIEKDYTVVTMRSKDRPKLVFDVVCTLTDMQYVVFHGMVSTEPVEAYQEFYIRHVDGLPI 302
Query: 82 RDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLH 141
+ + + Q LE A R+S G+ +E + DR GL S++ +
Sbjct: 303 NSEAEQERVIQCLEA----AIERRASEGL-------ELELSAEDRVGLLSDITRTFRENS 351
Query: 142 CNVVNAEIWTHNDRAAAVVHVTD 164
+V AEI T +A +VTD
Sbjct: 352 LTIVRAEISTREGKAKDTFYVTD 374
>gi|6091737|gb|AAF03449.1|AC010797_25 unknown protein [Arabidopsis thaliana]
Length = 462
Score = 332 bits (852), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 182/298 (61%), Positives = 206/298 (69%), Gaps = 36/298 (12%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEYAKLIRRMNPPRVVIDNN DATVI+VDSVNKHG LL+V+QVL D+NLVIKKAYIS
Sbjct: 3 DDEYAKLIRRMNPPRVVIDNNASDDATVIQVDSVNKHGTLLEVVQVLTDMNLVIKKAYIS 62
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ-----------------------------Q 92
SDGGWFMDVF VID DG KIRD +V+DYIQ Q
Sbjct: 63 SDGGWFMDVFKVIDQDGNKIRDTQVLDYIQKVSNVFHHFFSFIFNRFFSLCKTFVEFIAQ 122
Query: 93 RLETDAS-FAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 151
R+E++A F P LRSSVGVMPT+E+TSIE GTDRPGL SEV AVL DLHCNVVNAEIWT
Sbjct: 123 RIESNAGWFIPPLRSSVGVMPTDEYTSIELAGTDRPGLLSEVSAVLTDLHCNVVNAEIWT 182
Query: 152 HNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRER 211
HN RAAAV+HVTD+ST AI DP RLSTIKELL NV+R R AKT S +RER
Sbjct: 183 HNTRAAAVIHVTDNSTHSAITDPIRLSTIKELLCNVVRTNSGSRAAKTVFSCSD-THRER 241
Query: 212 RLHQIMFDDRDYERVEKAVGRVEDKSSRPQTCSMLCFMEWSTQEGRKLIR-NFIFDML 268
RLHQIMFDDRDYE V++A +SRP M +++ R R +FD++
Sbjct: 242 RLHQIMFDDRDYEGVKRA----RTSASRPSVTLMNIEKDYTVVTMRSKDRPKLVFDVV 295
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 11/143 (7%)
Query: 22 NTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKI 81
N D TV+ + S ++ ++ V+ L D+ V+ +S++ F + DG I
Sbjct: 272 NIEKDYTVVTMRSKDRPKLVFDVVCTLTDMQYVVFHGMVSTEPVEAYQEFYIRHVDGLPI 331
Query: 82 RDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLH 141
+ + + Q LE A R+S G+ +E + DR GL S++ +
Sbjct: 332 NSEAEQERVIQCLEA----AIERRASEGL-------ELELSAEDRVGLLSDITRTFRENS 380
Query: 142 CNVVNAEIWTHNDRAAAVVHVTD 164
+V AEI T +A +VTD
Sbjct: 381 LTIVRAEISTREGKAKDTFYVTD 403
>gi|255541934|ref|XP_002512031.1| amino acid binding protein, putative [Ricinus communis]
gi|223549211|gb|EEF50700.1| amino acid binding protein, putative [Ricinus communis]
Length = 443
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 155/240 (64%), Positives = 188/240 (78%), Gaps = 5/240 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEY KL RR+NPPRVVIDN +C +ATVI+VDS NKHGILL+V+QVL D+NL+I KAYI
Sbjct: 7 MDDEYEKLFRRLNPPRVVIDNESCKNATVIRVDSANKHGILLEVVQVLTDLNLIITKAYI 66
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG KI D+ ++DYI++ L ++ F S+R SVGV+P+ +HTSIE
Sbjct: 67 SSDGGWFMDVFNVRDQDGNKITDEAILDYIRKSLGPESRFTSSMR-SVGVIPSMDHTSIE 125
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG+DRPGL SE+ AVL L CNVV+AE+WTHN RAAAV+ VTD TG AI DP+RLS I
Sbjct: 126 LTGSDRPGLLSELSAVLTHLKCNVVSAEVWTHNMRAAAVMQVTDEETGSAIIDPERLSRI 185
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
KELL NVL+G + FR AKT +S G+ + ERRLHQ+MF DRDYER + V D+ RP
Sbjct: 186 KELLCNVLKGSNKFRGAKTVVS-HGVTHTERRLHQMMFADRDYERADD---EVLDEKQRP 241
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 15/171 (8%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + N D +V+ + S ++ +L + L D+ V+ A I ++G + +
Sbjct: 241 PNVSVVNWYDKDYSVVTIRSKDRPKLLFDTVCTLTDMEYVVFHANIDAEGPEAYQEYYIR 300
Query: 75 DCDGKKIR-DKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEV 133
DG ++ D E + IQ LE A R S G+ +E TDR GL S+V
Sbjct: 301 HIDGSPVKSDAERMRVIQC-LEA----AIERRVSEGL-------KLELCTTDRVGLLSDV 348
Query: 134 CAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
+ + V AE+ T + +A +V D S GY + D K + +I++++
Sbjct: 349 TRIFRENSLTVTRAEVTTRDGKAINTFYVRDAS-GYLV-DGKTIESIRQVI 397
>gi|147858719|emb|CAN83103.1| hypothetical protein VITISV_015490 [Vitis vinifera]
Length = 416
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 151/226 (66%), Positives = 179/226 (79%), Gaps = 11/226 (4%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEY KLIRRMNPPRVVIDN TC +A+VI+VDS NKHGILL+V+QVL D+NL+I KAYI
Sbjct: 1 MDDEYEKLIRRMNPPRVVIDNETCKNASVIRVDSANKHGILLEVVQVLIDLNLIITKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG KI D+E++DYIQ+ L +DA F S+R SVGV+P+ +HTSIE
Sbjct: 61 SSDGGWFMDVFNVTDQDGNKITDEEILDYIQKSLGSDACFISSMRRSVGVIPSTDHTSIE 120
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG+DRPGL SEV AVL L C+VVNAE+WTHN RAAAV+HVTD TG AI DP+RLS +
Sbjct: 121 LTGSDRPGLLSEVSAVLTHLKCSVVNAEVWTHNTRAAAVMHVTDEETGCAITDPERLSKV 180
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERV 226
K+LL N LR + S G+ + ERRLHQ+MF DRDYER+
Sbjct: 181 KQLLCN-LRLW----------SLHGVTHTERRLHQMMFADRDYERI 215
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 13/170 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + N D +V+ + S ++ +L + L D+ V+ A + ++G + +
Sbjct: 226 PNVNVVNWYDKDYSVVTIRSKDRPKLLFDTVCTLTDMQYVVFHANVDAEGPEAYQEYYIR 285
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG ++ D +QR+ A R S G+ +E TDR GL S+V
Sbjct: 286 HIDGSPVKS----DAERQRVIQCLEAAIERRVSEGL-------KLELCTTDRVGLLSDVT 334
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
+ + +V AE+ T +A HV D S GY + D K + +I+E +
Sbjct: 335 RIFRENSLSVTRAEVTTRAGKAVNTFHVRDAS-GYPV-DAKTIDSIREAI 382
>gi|224108635|ref|XP_002314917.1| predicted protein [Populus trichocarpa]
gi|222863957|gb|EEF01088.1| predicted protein [Populus trichocarpa]
Length = 443
Score = 303 bits (776), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 148/225 (65%), Positives = 177/225 (78%), Gaps = 2/225 (0%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEY KL RR+NPPRVVIDN C +ATVI+VDS NKHGILL+V+QVL D+NL+I KAYI
Sbjct: 7 MDDEYEKLFRRLNPPRVVIDNEACKNATVIRVDSANKHGILLEVVQVLTDLNLIITKAYI 66
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG K+ D+ ++DYI + L ++ F S+R SVGV + +HT+IE
Sbjct: 67 SSDGGWFMDVFNVTDPDGNKVTDEAILDYITKSLGPESCFTSSMR-SVGVKQSMDHTAIE 125
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG+DRPGL SEV AVL L CNVVNAE+WTHN RAAAV+ VTD TG AI DP++LS I
Sbjct: 126 LTGSDRPGLLSEVSAVLTHLKCNVVNAEVWTHNMRAAAVMQVTDEETGSAIIDPEKLSRI 185
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYER 225
KELL NVL+G + R AKT +S G+ + ERRLHQ+MF DRDYER
Sbjct: 186 KELLCNVLKGSNKSRGAKTVVS-HGVTHTERRLHQMMFADRDYER 229
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 13/170 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + N D +V+ + S ++ +L + L D+ V+ A I ++G + +
Sbjct: 241 PNVSVVNWCEKDYSVVTITSKDRPKLLFDTVCTLTDMEYVVFHANIDAEGPEAHQEYYIK 300
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG ++ + I Q LE A R S G+ +E TDR GL S+V
Sbjct: 301 HIDGSPVKSEAERQRIIQCLEA----AIERRVSEGL-------KLELCTTDRVGLLSDVT 349
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
+ + V AE+ T +A +V+D S GY + D K + +I++ +
Sbjct: 350 RIFRENSLTVTRAEVTTRAGKAVNTFYVSDAS-GYPV-DAKTIDSIRQAI 397
>gi|312281803|dbj|BAJ33767.1| unnamed protein product [Thellungiella halophila]
Length = 451
Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 150/244 (61%), Positives = 190/244 (77%), Gaps = 3/244 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+DDEY KLIRRMNPPRVVIDN++C +ATVI+VDS N++GILL+V+Q+L D+NL I KAYI
Sbjct: 7 VDDEYEKLIRRMNPPRVVIDNDSCKNATVIRVDSANEYGILLEVVQILTDLNLTITKAYI 66
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG K+ D+ V+DYIQ+ L +A F+ S+R +VGV+P+ + T IE
Sbjct: 67 SSDGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSSSMR-TVGVIPSTDSTVIE 125
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SE+ AVL L C+V+NAE+WTHN RAAAV+ VTD STG AI DP+RLS I
Sbjct: 126 LTGCDRPGLLSELTAVLTHLKCSVLNAEVWTHNTRAAAVMQVTDDSTGCAISDPERLSRI 185
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE-RVEKAVGRVEDKSSR 239
K LL NVL+G + R+AKT +S G ++ +RRLHQ+MF+DRDYE RV ++D+ R
Sbjct: 186 KNLLRNVLKGSNTPREAKTVVS-QGEVHTDRRLHQMMFEDRDYEHRVVDDDSSIQDERQR 244
Query: 240 PQTC 243
P C
Sbjct: 245 PDVC 248
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 75/170 (44%), Gaps = 13/170 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V +DN D +V+ V ++ +L + L D+ V+ + +DG + V
Sbjct: 245 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTDGTEAYQEYYVR 304
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG ++ + + Q LE A R S G+ +E TDR GL S V
Sbjct: 305 HIDGSPVKSEAEKQRVIQCLEA----AIKRRVSEGL-------KLELCTTDRVGLLSNVT 353
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
+ + V AE+ T +A +V+D S GY+I D K L +I++ +
Sbjct: 354 RIFRENSLTVTRAEVKTKGGKALNTFYVSDAS-GYSI-DAKTLDSIRQTI 401
>gi|224101597|ref|XP_002312346.1| predicted protein [Populus trichocarpa]
gi|222852166|gb|EEE89713.1| predicted protein [Populus trichocarpa]
Length = 443
Score = 300 bits (767), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 147/240 (61%), Positives = 183/240 (76%), Gaps = 5/240 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+DDEY KL RR+NPPRVVIDN C +ATVI+VDS NKHG LL+V+QVL D+NL+I KAY+
Sbjct: 7 LDDEYEKLFRRLNPPRVVIDNEACKNATVIRVDSANKHGKLLEVVQVLTDLNLIITKAYV 66
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG K+ D+ ++DYI + L T++ F S+ S GV + +HT+IE
Sbjct: 67 SSDGGWFMDVFNVTDQDGNKVTDEAILDYITKSLGTESCFTSSM-GSFGVKQSIDHTAIE 125
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG+DRPGL SEV AVLA L CNV+NAE+WTHN RAAAV+ VTD TG AI DP++LS +
Sbjct: 126 LTGSDRPGLLSEVSAVLAHLKCNVLNAEVWTHNMRAAAVMQVTDDETGSAITDPEKLSRV 185
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
KELL NVL+G + +R A+T +S G+ + ERRLHQ+MF DRDYER A V D+ RP
Sbjct: 186 KELLCNVLKGSNKYRGARTVVS-HGVTHTERRLHQMMFADRDYER---ANNDVLDEKQRP 241
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 74/168 (44%), Gaps = 13/168 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + N D +VI + S ++ +L + L D+ V+ A I ++G + +
Sbjct: 241 PNVSVVNWYEKDYSVITIRSKDRPKLLFDTVCTLTDMEYVVFHANIDAEGPEAHQEYYIK 300
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG ++ + I Q LE A R S G+ +E DR GL S+V
Sbjct: 301 HVDGSPVKSEAERQRIIQCLEA----AIERRVSEGL-------KLELCTKDRIGLLSDVT 349
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
+ + V AE+ T +A +V+D S GY + D K + +I++
Sbjct: 350 RIFRENSLTVTRAEVTTRAGKAVNTFYVSDAS-GYPV-DAKTIDSIRQ 395
>gi|195970393|gb|ACG60681.1| unknown protein [Brassica oleracea var. alboglabra]
Length = 446
Score = 298 bits (764), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 150/247 (60%), Positives = 189/247 (76%), Gaps = 8/247 (3%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEY KLIRRMNPPRVVIDN++C +ATVI+VDS N++GILL+V+Q+L D+NL I KAYI
Sbjct: 1 MDDEYEKLIRRMNPPRVVIDNDSCKNATVIRVDSANEYGILLEVVQILTDLNLTITKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG K+ D+ V+DYIQ+ L +A F+ +R ++GV P+ + T IE
Sbjct: 61 SSDGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSTPMR-TIGVTPSTDSTVIE 119
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SE+ AVL L C+V+NAE+WTHN RAAAV+ VTD STG AI DP+RLS I
Sbjct: 120 LTGCDRPGLLSELTAVLTHLRCSVLNAEVWTHNTRAAAVMQVTDDSTGCAISDPERLSRI 179
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV----GRVEDK 236
K LL NVL+G + R+AKT LS G ++ +RRLHQ+MF+DRDYE +AV ++D+
Sbjct: 180 KNLLRNVLKGSNTPREAKTVLS-HGEVHTDRRLHQMMFEDRDYE--HRAVVDDDSSIQDE 236
Query: 237 SSRPQTC 243
RP C
Sbjct: 237 RQRPDVC 243
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 14/210 (6%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V +DN D +V+ V ++ +L + L D+ V+ + ++G + V
Sbjct: 240 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAYQEYYVR 299
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG ++ + + Q LE A + R S G+ +E TDR GL S V
Sbjct: 300 HIDGSPVKSEAEKQRVIQCLEA----AINRRVSEGL-------KLELCTTDRVGLLSNVT 348
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFN-VLRGYDD 193
+ + V AE+ T +A +V+D S GY+I D K + +I++ + +L+ ++
Sbjct: 349 RIFRENSLTVTRAEVKTKGGKALNTFYVSDAS-GYSI-DAKTIDSIRQTIGQTILKVKNN 406
Query: 194 FRKAKTSLSPPGIMNRERRLHQIMFDDRDY 223
+ + PP + R L +F + +
Sbjct: 407 PEEQQQRQKPPSQDSPTRFLFGGLFKSKSF 436
>gi|297838675|ref|XP_002887219.1| hypothetical protein ARALYDRAFT_476032 [Arabidopsis lyrata subsp.
lyrata]
gi|297333060|gb|EFH63478.1| hypothetical protein ARALYDRAFT_476032 [Arabidopsis lyrata subsp.
lyrata]
Length = 455
Score = 298 bits (764), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 149/244 (61%), Positives = 188/244 (77%), Gaps = 3/244 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MD+EY KLIRRMNPPRVVIDN++C ATVI+VDS N++GILL+V+Q+L D+NL I KAYI
Sbjct: 11 MDNEYEKLIRRMNPPRVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYI 70
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG K+ D+ V+DYIQ+ L +A F+ S+R SVGV+P+ + T IE
Sbjct: 71 SSDGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSTSMR-SVGVIPSTDSTVIE 129
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SE+ AVL L C+V+NAE+WTHN RAAAV+ VTD STG I DP+RLS I
Sbjct: 130 LTGCDRPGLLSELSAVLTHLKCSVLNAEVWTHNTRAAAVMQVTDDSTGCGISDPERLSRI 189
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE-RVEKAVGRVEDKSSR 239
K LL NVL+G + R+AKT +S G ++ +RRLHQ+MF+DRDYE R+ ++D+ R
Sbjct: 190 KNLLRNVLKGSNTPREAKTVVS-HGEVHTDRRLHQMMFEDRDYEHRLVDDDSSIQDERQR 248
Query: 240 PQTC 243
P C
Sbjct: 249 PDVC 252
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 13/170 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V +DN D +V+ V ++ +L + L D+ V+ + ++G + V
Sbjct: 249 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAYQEYYVR 308
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG ++ + + Q LE A R S G+ +E +DR GL S V
Sbjct: 309 HIDGSPVKSEAEKQRVIQCLEA----AIKRRVSEGL-------KLELCTSDRVGLLSNVT 357
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
+ + V AE+ T +A +V+D S GY+I D K + +I++ +
Sbjct: 358 RIFRENSLTVTRAEVKTKGGKALNTFYVSDAS-GYSI-DAKTIDSIRQTI 405
>gi|255540149|ref|XP_002511139.1| amino acid binding protein, putative [Ricinus communis]
gi|223550254|gb|EEF51741.1| amino acid binding protein, putative [Ricinus communis]
Length = 452
Score = 298 bits (764), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 139/227 (61%), Positives = 178/227 (78%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEYAKLIRRMN PRVVIDN+ C AT+++VD++N++G LLQV+QVL D+NL+I KAYISS
Sbjct: 6 DEYAKLIRRMNSPRVVIDNDACEHATIVQVDTLNRYGTLLQVVQVLTDLNLIITKAYISS 65
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF V DG K+ D+ +++YI++ LE D S+RSS+ ++P++EHTSIE +
Sbjct: 66 DGVWFMDVFYVTGNDGNKVEDESILNYIKKALERDGHVVNSIRSSIAMLPSKEHTSIELS 125
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDRPGL SEV AVL DL C+VVNAEIWTHN R AA++H+T+ STG A+++PKRLS IKE
Sbjct: 126 GTDRPGLLSEVSAVLTDLGCSVVNAEIWTHNFRVAAIMHITEQSTGCAVEEPKRLSLIKE 185
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA 229
LL NVL+G FR K S+S P + RRLHQ+MF RD+ER+E A
Sbjct: 186 LLRNVLKGNSTFRSPKVSISSPEETHIGRRLHQMMFAARDFERLESA 232
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 71/168 (42%), Gaps = 2/168 (1%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V++ + D TV+ V +++ +L + L D+ V+ + + G + +
Sbjct: 239 PCVIVSDCADKDYTVVTVRCIDRPKLLFDTVFALTDMQYVVFHGTVITGGKEAYQEYYIR 298
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG I + + + LE S R + + + +E DR GL S++
Sbjct: 299 HVDGLPISSEAERQRVTECLEAAIERRASERYTHRNVTLSQGLELELCTDDRFGLLSDIT 358
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
+ + ++ AEI T N +A VTD G ++ DP + I+E
Sbjct: 359 RIFRENGLSIQRAEISTKNGKAKDTFFVTD-VAGNSV-DPTTVRMIRE 404
>gi|297738125|emb|CBI27326.3| unnamed protein product [Vitis vinifera]
Length = 400
Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 141/201 (70%), Positives = 167/201 (83%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEY KLIRRMNPPRVVIDN TC +A+VI+VDS NKHGILL+V+QVL D+NL+I KAYI
Sbjct: 7 MDDEYEKLIRRMNPPRVVIDNETCKNASVIRVDSANKHGILLEVVQVLIDLNLIITKAYI 66
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG KI D+E++DYIQ+ L +DA F S+R SVGV+P+ +HTSIE
Sbjct: 67 SSDGGWFMDVFNVTDQDGNKITDEEILDYIQKSLGSDACFISSMRRSVGVIPSTDHTSIE 126
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG+DRPGL SEV AVL L C+VVNAE+WTHN RAAAV+HVTD TG AI DP+RLS +
Sbjct: 127 LTGSDRPGLLSEVSAVLTHLKCSVVNAEVWTHNTRAAAVMHVTDEETGCAITDPERLSKV 186
Query: 181 KELLFNVLRGYDDFRKAKTSL 201
K+LL NVL+G + R+AKT L
Sbjct: 187 KQLLCNVLKGSNKSREAKTLL 207
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 13/145 (8%)
Query: 40 ILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDAS 99
+L + L D+ V+ A + ++G + + DG ++ D +QR+
Sbjct: 206 LLFDTVCTLTDMQYVVFHANVDAEGPEAYQEYYIRHIDGSPVKS----DAERQRVIQCLE 261
Query: 100 FAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAV 159
A R S G+ +E TDR GL S+V + + +V AE+ T +A
Sbjct: 262 AAIERRVSEGL-------KLELCTTDRVGLLSDVTRIFRENSLSVTRAEVTTRAGKAVNT 314
Query: 160 VHVTDHSTGYAIKDPKRLSTIKELL 184
HV D S GY + D K + +I+E +
Sbjct: 315 FHVRDAS-GYPV-DAKTIDSIREAI 337
>gi|356499934|ref|XP_003518790.1| PREDICTED: uncharacterized protein LOC100813551 isoform 1 [Glycine
max]
Length = 449
Score = 297 bits (761), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 145/226 (64%), Positives = 174/226 (76%), Gaps = 2/226 (0%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEY KL RRMNPPRVVIDN C +ATVI+VDS NKHGILL+V+Q+L D+NL+I KAYI
Sbjct: 12 MDDEYEKLFRRMNPPRVVIDNEACKNATVIRVDSANKHGILLEVVQILTDLNLIITKAYI 71
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV DG K+ D+ ++DYI++ L ++ +R SVGV T +HT+IE
Sbjct: 72 SSDGGWFMDVFNVTGQDGNKVTDEAILDYIRKSLGPESCVTSPMR-SVGVKQTMDHTAIE 130
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
GTDRPGL SEV AVL +L CN++NAE+WTHN RAAAV+HVTD TG AI DP+RLS I
Sbjct: 131 LMGTDRPGLLSEVSAVLTNLKCNILNAEVWTHNTRAAAVMHVTDEETGSAISDPQRLSII 190
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERV 226
KELL NVL G + R AKT ++ + ERRLHQ+MF DRDYERV
Sbjct: 191 KELLCNVLGGGNKKRGAKTVVTDEA-THTERRLHQMMFADRDYERV 235
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 97/225 (43%), Gaps = 26/225 (11%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DD++A+ R P V + N + D +V+ + ++ +L + L D+ V+ A I
Sbjct: 238 DDDFAEKQR----PNVNVVNWSDKDYSVVTIQCKDRPKLLFDTVCTLTDMQYVVFHANID 293
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEF 121
++G + + DG ++ D +QR+ + A R S G+ +E
Sbjct: 294 AEGPEAYQEYYIKHIDGSPVKS----DAERQRVIQCLAAAIERRVSEGL-------KLEL 342
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
TDR GL S+V + + V AE+ T +A +V S G+ + D K + +I+
Sbjct: 343 CTTDRVGLLSDVTRIFRENSLTVTRAEVATKGGKAVNTFYVRGAS-GFPV-DSKTIESIR 400
Query: 182 ELLFNVL---RGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDY 223
+ + N + +G + K+ SP R L +F R +
Sbjct: 401 QTIGNTILKVKGSPEEMKSVPQDSPT------RSLFSGLFKSRSF 439
>gi|42572033|ref|NP_974107.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|332196758|gb|AEE34879.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 455
Score = 297 bits (760), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 149/244 (61%), Positives = 187/244 (76%), Gaps = 3/244 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MD+EY KLIRRMNPPRVVIDN++C ATVI+VDS N++GILL+V+Q+L D+NL I KAYI
Sbjct: 11 MDNEYEKLIRRMNPPRVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYI 70
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG K+ D+ V+DYIQ+ L +A F+ S+R SVGV+P+ + T IE
Sbjct: 71 SSDGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSTSMR-SVGVIPSTDSTVIE 129
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SE+ AVL L C+V+NAEIWTHN RAAAV+ VTD TG I DP+RLS I
Sbjct: 130 LTGCDRPGLLSELSAVLTHLKCSVLNAEIWTHNTRAAAVMQVTDDLTGCGISDPERLSRI 189
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE-RVEKAVGRVEDKSSR 239
K LL NVL+G + R+AKT +S G ++ +RRLHQ+MF+DRDYE R+ ++D+ R
Sbjct: 190 KNLLRNVLKGSNTPREAKTVVS-HGEVHTDRRLHQMMFEDRDYEHRLVDDDSSIQDERQR 248
Query: 240 PQTC 243
P C
Sbjct: 249 PDVC 252
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 13/170 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V +DN D +V+ V ++ +L + L D+ V+ + ++G + V
Sbjct: 249 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVR 308
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG ++ + + Q LE A R S G+ +E TDR GL S V
Sbjct: 309 HIDGSPVKSEAEKQRVIQCLEA----AIKRRVSEGL-------KLELCTTDRVGLLSNVT 357
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
+ + V AE+ T +A +V+D S GY+I D K + +I++ +
Sbjct: 358 RIFRENSLTVTRAEVKTKGGKALNTFYVSDAS-GYSI-DAKTIDSIRQTI 405
>gi|195970384|gb|ACG60673.1| hypothetical protein BoB028L01.070 [Brassica oleracea var.
alboglabra]
Length = 425
Score = 297 bits (760), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 148/246 (60%), Positives = 188/246 (76%), Gaps = 5/246 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEY KLIRRMNPPRVVIDN++C +ATVI+VDS N++GILL+V+Q+L D++L I KAYI
Sbjct: 12 MDDEYEKLIRRMNPPRVVIDNDSCKEATVIRVDSANEYGILLEVVQILTDLDLTITKAYI 71
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV DG K+ D+ V+DYIQ+ L +A F+ SLR SVGV+P+ + T IE
Sbjct: 72 SSDGGWFMDVFNVTHQDGNKVTDEVVLDYIQKSLGPEACFSTSLR-SVGVIPSTDSTVIE 130
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SE+ AVL L C+V+NAE+WTHN RAAAV+ VTD TG A+ DP+RLS I
Sbjct: 131 LTGCDRPGLLSELTAVLTHLKCSVLNAEVWTHNTRAAAVMEVTDDLTGSAVSDPERLSLI 190
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYER---VEKAVGRVEDKS 237
K LL NVL+G + ++AKT +S G ++ +RRLHQ+MF+DRDYE V+ V+D+
Sbjct: 191 KSLLRNVLKGSNTPKEAKTVVS-QGEVHTDRRLHQMMFEDRDYENGVMVDDDSSNVQDER 249
Query: 238 SRPQTC 243
RP C
Sbjct: 250 QRPDVC 255
>gi|15221589|ref|NP_177067.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|22138098|gb|AAM93429.1| ACR4 [Arabidopsis thaliana]
gi|115646770|gb|ABJ17112.1| At1g69040 [Arabidopsis thaliana]
gi|332196757|gb|AEE34878.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 451
Score = 296 bits (759), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 149/244 (61%), Positives = 187/244 (76%), Gaps = 3/244 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MD+EY KLIRRMNPPRVVIDN++C ATVI+VDS N++GILL+V+Q+L D+NL I KAYI
Sbjct: 7 MDNEYEKLIRRMNPPRVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYI 66
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG K+ D+ V+DYIQ+ L +A F+ S+R SVGV+P+ + T IE
Sbjct: 67 SSDGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSTSMR-SVGVIPSTDSTVIE 125
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SE+ AVL L C+V+NAEIWTHN RAAAV+ VTD TG I DP+RLS I
Sbjct: 126 LTGCDRPGLLSELSAVLTHLKCSVLNAEIWTHNTRAAAVMQVTDDLTGCGISDPERLSRI 185
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE-RVEKAVGRVEDKSSR 239
K LL NVL+G + R+AKT +S G ++ +RRLHQ+MF+DRDYE R+ ++D+ R
Sbjct: 186 KNLLRNVLKGSNTPREAKTVVS-HGEVHTDRRLHQMMFEDRDYEHRLVDDDSSIQDERQR 244
Query: 240 PQTC 243
P C
Sbjct: 245 PDVC 248
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 13/170 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V +DN D +V+ V ++ +L + L D+ V+ + ++G + V
Sbjct: 245 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVR 304
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG ++ + + Q LE A R S G+ +E TDR GL S V
Sbjct: 305 HIDGSPVKSEAEKQRVIQCLEA----AIKRRVSEGL-------KLELCTTDRVGLLSNVT 353
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
+ + V AE+ T +A +V+D S GY+I D K + +I++ +
Sbjct: 354 RIFRENSLTVTRAEVKTKGGKALNTFYVSDAS-GYSI-DAKTIDSIRQTI 401
>gi|6730631|gb|AAF27052.1|AC008262_1 F4N2.2 [Arabidopsis thaliana]
Length = 445
Score = 296 bits (759), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 149/244 (61%), Positives = 187/244 (76%), Gaps = 3/244 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MD+EY KLIRRMNPPRVVIDN++C ATVI+VDS N++GILL+V+Q+L D+NL I KAYI
Sbjct: 1 MDNEYEKLIRRMNPPRVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG K+ D+ V+DYIQ+ L +A F+ S+R SVGV+P+ + T IE
Sbjct: 61 SSDGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSTSMR-SVGVIPSTDSTVIE 119
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SE+ AVL L C+V+NAEIWTHN RAAAV+ VTD TG I DP+RLS I
Sbjct: 120 LTGCDRPGLLSELSAVLTHLKCSVLNAEIWTHNTRAAAVMQVTDDLTGCGISDPERLSRI 179
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE-RVEKAVGRVEDKSSR 239
K LL NVL+G + R+AKT +S G ++ +RRLHQ+MF+DRDYE R+ ++D+ R
Sbjct: 180 KNLLRNVLKGSNTPREAKTVVS-HGEVHTDRRLHQMMFEDRDYEHRLVDDDSSIQDERQR 238
Query: 240 PQTC 243
P C
Sbjct: 239 PDVC 242
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 13/170 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V +DN D +V+ V ++ +L + L D+ V+ + ++G + V
Sbjct: 239 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVR 298
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG ++ + + Q LE A R S G+ +E TDR GL S V
Sbjct: 299 HIDGSPVKSEAEKQRVIQCLEA----AIKRRVSEGL-------KLELCTTDRVGLLSNVT 347
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
+ + V AE+ T +A +V+D S GY+I D K + +I++ +
Sbjct: 348 RIFRENSLTVTRAEVKTKGGKALNTFYVSDAS-GYSI-DAKTIDSIRQTI 395
>gi|356495189|ref|XP_003516462.1| PREDICTED: uncharacterized protein LOC100787134 [Glycine max]
Length = 449
Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 144/226 (63%), Positives = 173/226 (76%), Gaps = 2/226 (0%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEY KL RRMNPPRVVIDN C +ATVI+VDS NKHGILL+V+Q+L D+NL+I KAYI
Sbjct: 12 MDDEYEKLFRRMNPPRVVIDNEACKNATVIRVDSANKHGILLEVVQILTDLNLIITKAYI 71
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV DG K+ D+ ++DYI++ L ++ +R SVGV T +H +IE
Sbjct: 72 SSDGGWFMDVFNVTGQDGNKVTDEAILDYIRKSLGPESCVTSPMR-SVGVKQTTDHIAIE 130
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
GTDRPGL SEV AVL +L CN+VNAE+WTHN RAAAV+HVTD +G AI DP+RLS I
Sbjct: 131 LMGTDRPGLLSEVSAVLTNLKCNIVNAEVWTHNTRAAAVMHVTDEESGSAITDPQRLSII 190
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERV 226
KELL NVL G + R AKT ++ + ERRLHQ+MF DRDYERV
Sbjct: 191 KELLCNVLGGGNKKRGAKTVVTDEA-THTERRLHQMMFADRDYERV 235
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 90/212 (42%), Gaps = 22/212 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + N + D +V+ + ++ +L + L D+ V+ A I ++G + +
Sbjct: 247 PNVNVVNWSDKDYSVVTIQCKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPEAYQEYYIK 306
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG ++ D +QR+ + A R S G+ +E TDR GL S+V
Sbjct: 307 HIDGSPVKS----DAERQRVIQCLAAAIQRRVSEGL-------KLELCTTDRVGLLSDVT 355
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL---RGY 191
+ + V AE+ T +A +V S G+ + D K + +I++ + N + +G
Sbjct: 356 RIFRENSLTVTRAEVATKGGKAVNTFYVRGAS-GFPV-DSKTIESIRQTIGNTILKVKGS 413
Query: 192 DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDY 223
+ K+ SP R L +F R +
Sbjct: 414 PEEMKSVPQDSPT------RSLFSGLFKSRSF 439
>gi|357487953|ref|XP_003614264.1| ACR4 [Medicago truncatula]
gi|355515599|gb|AES97222.1| ACR4 [Medicago truncatula]
Length = 451
Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 145/227 (63%), Positives = 177/227 (77%), Gaps = 2/227 (0%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEY KL RRMNPPRVVIDN +ATVI+VDS NK GILL+V+Q+L D+NL+I KAYI
Sbjct: 17 MDDEYEKLFRRMNPPRVVIDNGASQNATVIRVDSANKQGILLEVVQILTDLNLIITKAYI 76
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG K+ D+ ++DYI++ L ++ FA ++R SVGV T +HT+IE
Sbjct: 77 SSDGGWFMDVFNVTDQDGNKVTDEVILDYIRKSLGPESCFATTMR-SVGVKQTPDHTAIE 135
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
G+DRPGL SEV AVL +L CN+VNAE+WTHN RAAAV+HVTD TG AI D +RLS I
Sbjct: 136 LMGSDRPGLLSEVSAVLTNLKCNIVNAEVWTHNMRAAAVMHVTDEETGSAITDSQRLSLI 195
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVE 227
KELL NVL G + R AKT ++ + +RRLHQ+MFDDRDYERV+
Sbjct: 196 KELLCNVLGGGNRKRGAKTVVTDDS-THTDRRLHQMMFDDRDYERVD 241
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 74/174 (42%), Gaps = 13/174 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + N + D +V+ ++ ++ ++ + L D+ V+ A I ++G + +
Sbjct: 251 PNVDVVNWSDKDYSVVTIECRDRPKLVFDTVCTLTDMQYVVFHANIDAEGPQAYQEYYIK 310
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG ++ D +QR+ A R S G+ +E TDR GL S V
Sbjct: 311 HIDGSPVKS----DAERQRVIHCLEAAIERRVSEGL-------KLELCTTDRVGLLSNVT 359
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+ + V AE+ T +A +V S I D K + +I++ + N +
Sbjct: 360 RIFRENSLTVTRAEVTTKGGKAVNTFYVRGASG--CIVDSKTIESIRQTIGNTI 411
>gi|449452827|ref|XP_004144160.1| PREDICTED: uncharacterized protein LOC101218703 [Cucumis sativus]
gi|449524655|ref|XP_004169337.1| PREDICTED: uncharacterized protein LOC101228960 [Cucumis sativus]
Length = 444
Score = 294 bits (752), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 145/230 (63%), Positives = 177/230 (76%), Gaps = 1/230 (0%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+DDEY KLIRRMNPPRVVIDN+ C DATVI+VDS NKHGILL+V+QVL D+NL++ KAYI
Sbjct: 7 IDDEYVKLIRRMNPPRVVIDNDACKDATVIRVDSANKHGILLEVVQVLTDLNLIVTKAYI 66
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
S DG WFMDVFNV D DG K+ D+ V+DYI++ LE+D+ FA S+R SVGV P+ ++T IE
Sbjct: 67 SCDGCWFMDVFNVTDQDGNKVTDEGVLDYIKRSLESDSCFASSMR-SVGVKPSVDYTVIE 125
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
G DR GL SEV AVL L CNVV+AE+WTHN RAAAV+HVTD TG AI D +RLS I
Sbjct: 126 LIGNDRQGLLSEVSAVLTHLKCNVVHAEVWTHNTRAAAVMHVTDDETGSAITDLERLSRI 185
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
K LL NVLRG + K ++ G+ + ERRLHQ+MF DRDYE +++ V
Sbjct: 186 KGLLSNVLRGSNSRSKGAKTVVSHGVTHIERRLHQMMFADRDYELLDEDV 235
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 82/189 (43%), Gaps = 19/189 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + N D +V+ + S ++ +L + L D+ V+ A + ++G + +
Sbjct: 242 PNVKVVNWCDIDYSVVTIRSKDRPKLLFDTVCTLTDMQYVVFHANVVAEGTEAYQEYYIR 301
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG ++ D +QR+ A R S G+ +E TDR GL S+V
Sbjct: 302 HIDGSPVKS----DAERQRVIHCLEAAIRRRVSEGL-------KLELCTTDRVGLLSDVT 350
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDF 194
+ + V AE+ T +A +V D S GY + D K + +I+EL+ +
Sbjct: 351 RIFRENSLTVTRAEVTTKAGKAINTFYVRDPS-GYPV-DSKTIDSIRELIGQTI------ 402
Query: 195 RKAKTSLSP 203
K K S SP
Sbjct: 403 LKVKGSSSP 411
>gi|357487955|ref|XP_003614265.1| ACR4 [Medicago truncatula]
gi|355515600|gb|AES97223.1| ACR4 [Medicago truncatula]
Length = 362
Score = 293 bits (749), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 145/227 (63%), Positives = 177/227 (77%), Gaps = 2/227 (0%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEY KL RRMNPPRVVIDN +ATVI+VDS NK GILL+V+Q+L D+NL+I KAYI
Sbjct: 17 MDDEYEKLFRRMNPPRVVIDNGASQNATVIRVDSANKQGILLEVVQILTDLNLIITKAYI 76
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG K+ D+ ++DYI++ L ++ FA ++R SVGV T +HT+IE
Sbjct: 77 SSDGGWFMDVFNVTDQDGNKVTDEVILDYIRKSLGPESCFATTMR-SVGVKQTPDHTAIE 135
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
G+DRPGL SEV AVL +L CN+VNAE+WTHN RAAAV+HVTD TG AI D +RLS I
Sbjct: 136 LMGSDRPGLLSEVSAVLTNLKCNIVNAEVWTHNMRAAAVMHVTDEETGSAITDSQRLSLI 195
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVE 227
KELL NVL G + R AKT ++ + +RRLHQ+MFDDRDYERV+
Sbjct: 196 KELLCNVLGGGNRKRGAKTVVTDDS-THTDRRLHQMMFDDRDYERVD 241
>gi|357487957|ref|XP_003614266.1| ACR4 [Medicago truncatula]
gi|355515601|gb|AES97224.1| ACR4 [Medicago truncatula]
Length = 312
Score = 293 bits (749), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 145/227 (63%), Positives = 177/227 (77%), Gaps = 2/227 (0%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEY KL RRMNPPRVVIDN +ATVI+VDS NK GILL+V+Q+L D+NL+I KAYI
Sbjct: 17 MDDEYEKLFRRMNPPRVVIDNGASQNATVIRVDSANKQGILLEVVQILTDLNLIITKAYI 76
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVFNV D DG K+ D+ ++DYI++ L ++ FA ++R SVGV T +HT+IE
Sbjct: 77 SSDGGWFMDVFNVTDQDGNKVTDEVILDYIRKSLGPESCFATTMR-SVGVKQTPDHTAIE 135
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
G+DRPGL SEV AVL +L CN+VNAE+WTHN RAAAV+HVTD TG AI D +RLS I
Sbjct: 136 LMGSDRPGLLSEVSAVLTNLKCNIVNAEVWTHNMRAAAVMHVTDEETGSAITDSQRLSLI 195
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVE 227
KELL NVL G + R AKT ++ + +RRLHQ+MFDDRDYERV+
Sbjct: 196 KELLCNVLGGGNRKRGAKTVVTDDST-HTDRRLHQMMFDDRDYERVD 241
>gi|224134040|ref|XP_002321721.1| predicted protein [Populus trichocarpa]
gi|222868717|gb|EEF05848.1| predicted protein [Populus trichocarpa]
Length = 397
Score = 292 bits (748), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 143/246 (58%), Positives = 183/246 (74%), Gaps = 7/246 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DD YAKL+RR+N PRVV+DN+ C ATVI+VD+V + G LL+V+QVL D+NLV+ KAY+S
Sbjct: 2 DDAYAKLLRRVNSPRVVVDNDACEHATVIQVDTVKRQGALLEVVQVLTDLNLVMTKAYMS 61
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEF 121
SDG WFM+VF V D G KIRD+++++ I++ LETDA ++S+ ++P++EHT IE
Sbjct: 62 SDGVWFMNVFYVTDDHGNKIRDEDIVNCIEKALETDACM---VKSTGKMLPSKEHTLIEL 118
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
TGTDRPGL SEVCAVL DL CNVVNAEIW HN RAAAV+H+ D STG AI+DP++LS IK
Sbjct: 119 TGTDRPGLLSEVCAVLTDLRCNVVNAEIWAHNGRAAAVIHIADQSTGTAIEDPRKLSLIK 178
Query: 182 ELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQ 241
ELL+NVL+G+ DFR S+S PG ++ RRLHQ+MF RD+ER G D S RP
Sbjct: 179 ELLYNVLKGHGDFRTPIVSISSPGEIHIGRRLHQMMFAARDFER----PGSENDNSVRPY 234
Query: 242 TCSMLC 247
C
Sbjct: 235 VTVFDC 240
>gi|224119390|ref|XP_002318060.1| predicted protein [Populus trichocarpa]
gi|222858733|gb|EEE96280.1| predicted protein [Populus trichocarpa]
Length = 441
Score = 287 bits (735), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 136/221 (61%), Positives = 174/221 (78%), Gaps = 3/221 (1%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG 64
YAKL+RRMN PRVVI+N+ C ATVI++D+V + G LL+V+QVL D+NLVI KAY+SSDG
Sbjct: 11 YAKLVRRMNSPRVVIENDACEHATVIQLDTVYRQGTLLEVVQVLTDLNLVITKAYMSSDG 70
Query: 65 GWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGT 124
GWFM+VF+V D DG KIRD+ +++ I++ LETDA S+ ++ ++EHT IE TGT
Sbjct: 71 GWFMNVFHVTDDDGNKIRDEGILNCIKKALETDAYMVKSMGK---MLLSKEHTLIELTGT 127
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
DRPGL SEVCAVL DL CNVVNAE+W HN RAAAV+H+TD STG AI+DP++LS IKELL
Sbjct: 128 DRPGLLSEVCAVLTDLSCNVVNAEVWAHNARAAAVIHITDQSTGTAIEDPRQLSLIKELL 187
Query: 185 FNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYER 225
+NVL+G D+R S+S PG ++ RRLHQ+MF RD+ER
Sbjct: 188 YNVLKGLGDYRTPTVSISSPGEIHIGRRLHQMMFAARDFER 228
>gi|297818020|ref|XP_002876893.1| hypothetical protein ARALYDRAFT_904656 [Arabidopsis lyrata subsp.
lyrata]
gi|297322731|gb|EFH53152.1| hypothetical protein ARALYDRAFT_904656 [Arabidopsis lyrata subsp.
lyrata]
Length = 456
Score = 286 bits (732), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 150/245 (61%), Positives = 180/245 (73%), Gaps = 7/245 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDE AK IRR+NPPRVVIDN C D TVIKVDS NKHGILL+V+QVL ++NL IKKAYI
Sbjct: 11 MDDEIAKFIRRVNPPRVVIDNEVCKDVTVIKVDSANKHGILLEVVQVLTELNLTIKKAYI 70
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDAS--FAPSLRSSVGVMPTEEHTS 118
SSDGGWFMDVFNV D DG K+ D+ V+DYI++ L D S F+PS+RS++GV + ++T
Sbjct: 71 SSDGGWFMDVFNVTDQDGNKVTDEIVLDYIRKSLGPDESTCFSPSMRSTIGVKQSVDYTV 130
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
IE TGTDRPGL SE+CAVL DL CNVVNAEIWTH +AAAV+ VTD T AI DP+RLS
Sbjct: 131 IELTGTDRPGLLSELCAVLMDLQCNVVNAEIWTHRAKAAAVLQVTDEETCSAITDPERLS 190
Query: 179 TIKELLFNVLRGYDD---FRKAKTSLSPP-GIMNRERRLHQIMFDDRDYERVEKAVGRVE 234
I++LL VL G FR+ KT +S + +R+LHQ+MF DRDY+ E V E
Sbjct: 191 KIRKLLGYVLTGGSSGRRFREPKTMVSSALDDTHTDRKLHQLMFADRDYDEWENNVDD-E 249
Query: 235 DKSSR 239
DK R
Sbjct: 250 DKCGR 254
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 86/196 (43%), Gaps = 16/196 (8%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + N D +++ + ++ +L + L D+N V+ A I ++G + +
Sbjct: 257 PDVDVSNLHDLDYSIVMIKCKDRPKLLFDTVFTLTDMNYVVSHASIDAEGPEAYQEYYIR 316
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG ++ + +QR+ A R S G+ +E +DR GL S+V
Sbjct: 317 HTDGSPVKSEAE----RQRVIKCLKAAIQRRVSEGL-------KLELCTSDRVGLLSDVT 365
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL---RGY 191
+ + V AE+ T D+A +V D S GY + D K + +I++++ + +G
Sbjct: 366 RIFRENSLTVTRAEVKTKGDKALNTFYVRDAS-GYQV-DAKTIESIRQVIGQTILQVKGG 423
Query: 192 DDFRKAKTSLSPPGIM 207
+ K SP G +
Sbjct: 424 NTDAKTSPQDSPTGFL 439
>gi|22138100|gb|AAM93430.1| ACR5 [Arabidopsis thaliana]
Length = 446
Score = 286 bits (731), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 148/245 (60%), Positives = 181/245 (73%), Gaps = 7/245 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDE AK IRR+NPPRVVIDN C D TVIKVDS NKHGILL+V+QVL ++NL IKKAYI
Sbjct: 1 MDDEIAKFIRRVNPPRVVIDNEVCKDVTVIKVDSANKHGILLEVVQVLTELNLTIKKAYI 60
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDAS--FAPSLRSSVGVMPTEEHTS 118
SSDGGWFMDVFNV D DG K+ D+ V++YI++ L D S F+PS+RS++GV + ++T
Sbjct: 61 SSDGGWFMDVFNVTDQDGNKVTDEIVLEYIRKSLGPDESSCFSPSMRSTIGVKQSVDYTV 120
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
+E TGTDRPGL SE+CAVL DL CNVVNAEIWTH +AAAV+ VTD T AI DP+RLS
Sbjct: 121 VELTGTDRPGLLSELCAVLMDLQCNVVNAEIWTHRAKAAAVLQVTDEETCSAITDPERLS 180
Query: 179 TIKELLFNVLRGYDD---FRKAKTSLSPP-GIMNRERRLHQIMFDDRDYERVEKAVGRVE 234
I++LL VL G FR+ KT++S + +R+LHQ+MF DRDY+ E V E
Sbjct: 181 KIRKLLGYVLTGGSSGRRFREPKTTVSSALNETHTDRKLHQLMFADRDYDEWENNVDD-E 239
Query: 235 DKSSR 239
DK R
Sbjct: 240 DKCGR 244
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 86/196 (43%), Gaps = 16/196 (8%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + N D +++ + ++ +L + L D+N V+ A I ++G + +
Sbjct: 247 PDVDVSNLHDLDYSIVMIKCKDRPKLLFDTVFTLTDMNYVVSHASIDAEGPQAYQEYYIR 306
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG ++ + +QR+ A R S G+ +E +DR GL S+V
Sbjct: 307 HTDGSPVKSEAE----RQRVIKCLKAAIQRRVSEGL-------KLELCTSDRVGLLSDVT 355
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL---RGY 191
+ + V AE+ T D+A +V D S GY + D K + +I++++ + +G
Sbjct: 356 RIFRENSLTVTRAEVKTKGDKALNTFYVRDAS-GYQV-DTKTIESIRQVIGQTILQVKGG 413
Query: 192 DDFRKAKTSLSPPGIM 207
+ K SP G +
Sbjct: 414 NTDAKPSPQDSPTGFL 429
>gi|18395601|ref|NP_565304.1| ACT domain-containing protein 5 [Arabidopsis thaliana]
gi|79316674|ref|NP_001030965.1| ACT domain-containing protein 5 [Arabidopsis thaliana]
gi|20197900|gb|AAD20075.2| putative uridylyl transferase [Arabidopsis thaliana]
gi|24030269|gb|AAN41308.1| putative uridylyl transferase [Arabidopsis thaliana]
gi|222424419|dbj|BAH20165.1| AT2G03730 [Arabidopsis thaliana]
gi|330250648|gb|AEC05742.1| ACT domain-containing protein 5 [Arabidopsis thaliana]
gi|330250649|gb|AEC05743.1| ACT domain-containing protein 5 [Arabidopsis thaliana]
Length = 456
Score = 286 bits (731), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 148/245 (60%), Positives = 181/245 (73%), Gaps = 7/245 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDE AK IRR+NPPRVVIDN C D TVIKVDS NKHGILL+V+QVL ++NL IKKAYI
Sbjct: 11 MDDEIAKFIRRVNPPRVVIDNEVCKDVTVIKVDSANKHGILLEVVQVLTELNLTIKKAYI 70
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDAS--FAPSLRSSVGVMPTEEHTS 118
SSDGGWFMDVFNV D DG K+ D+ V++YI++ L D S F+PS+RS++GV + ++T
Sbjct: 71 SSDGGWFMDVFNVTDQDGNKVTDEIVLEYIRKSLGPDESSCFSPSMRSTIGVKQSVDYTV 130
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
+E TGTDRPGL SE+CAVL DL CNVVNAEIWTH +AAAV+ VTD T AI DP+RLS
Sbjct: 131 VELTGTDRPGLLSELCAVLMDLQCNVVNAEIWTHRAKAAAVLQVTDEETCSAITDPERLS 190
Query: 179 TIKELLFNVLRGYDD---FRKAKTSLSPP-GIMNRERRLHQIMFDDRDYERVEKAVGRVE 234
I++LL VL G FR+ KT++S + +R+LHQ+MF DRDY+ E V E
Sbjct: 191 KIRKLLGYVLTGGSSGRRFREPKTTVSSALNETHTDRKLHQLMFADRDYDEWENNVDD-E 249
Query: 235 DKSSR 239
DK R
Sbjct: 250 DKCGR 254
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 86/196 (43%), Gaps = 16/196 (8%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + N D +++ + ++ +L + L D+N V+ A I ++G + +
Sbjct: 257 PDVDVSNLHDLDYSIVMIKCKDRPKLLFDTVFTLTDMNYVVSHASIDAEGPQAYQEYYIR 316
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG ++ + +QR+ A R S G+ +E +DR GL S+V
Sbjct: 317 HTDGSPVKSEAE----RQRVIKCLKAAIQRRVSEGL-------KLELCTSDRVGLLSDVT 365
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL---RGY 191
+ + V AE+ T D+A +V D S GY + D K + +I++++ + +G
Sbjct: 366 RIFRENSLTVTRAEVKTKGDKALNTFYVRDAS-GYQV-DTKTIESIRQVIGQTILQVKGG 423
Query: 192 DDFRKAKTSLSPPGIM 207
+ K SP G +
Sbjct: 424 NTDAKPSPQDSPTGFL 439
>gi|356499936|ref|XP_003518791.1| PREDICTED: uncharacterized protein LOC100813551 isoform 2 [Glycine
max]
Length = 433
Score = 286 bits (731), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 143/229 (62%), Positives = 169/229 (73%), Gaps = 19/229 (8%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDEY KL RRMNPPRVVIDN C +ATVI+VDS NKHGILL+V+Q+L D+NL+I KAYI
Sbjct: 7 MDDEYEKLFRRMNPPRVVIDNEACKNATVIRVDSANKHGILLEVVQILTDLNLIITKAYI 66
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMP---TEEHT 117
SSDGGWFMDVFNV DG K+ D+ ++DYI++ VGV P T +HT
Sbjct: 67 SSDGGWFMDVFNVTGQDGNKVTDEAILDYIRK---------------VGVSPFGQTMDHT 111
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
+IE GTDRPGL SEV AVL +L CN++NAE+WTHN RAAAV+HVTD TG AI DP+RL
Sbjct: 112 AIELMGTDRPGLLSEVSAVLTNLKCNILNAEVWTHNTRAAAVMHVTDEETGSAISDPQRL 171
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERV 226
S IKELL NVL G + R AKT ++ + ERRLHQ+MF DRDYERV
Sbjct: 172 SIIKELLCNVLGGGNKKRGAKTVVTDEA-THTERRLHQMMFADRDYERV 219
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 97/225 (43%), Gaps = 26/225 (11%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DD++A+ R P V + N + D +V+ + ++ +L + L D+ V+ A I
Sbjct: 222 DDDFAEKQR----PNVNVVNWSDKDYSVVTIQCKDRPKLLFDTVCTLTDMQYVVFHANID 277
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEF 121
++G + + DG ++ D +QR+ + A R S G+ +E
Sbjct: 278 AEGPEAYQEYYIKHIDGSPVKS----DAERQRVIQCLAAAIERRVSEGL-------KLEL 326
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
TDR GL S+V + + V AE+ T +A +V S G+ + D K + +I+
Sbjct: 327 CTTDRVGLLSDVTRIFRENSLTVTRAEVATKGGKAVNTFYVRGAS-GFPV-DSKTIESIR 384
Query: 182 ELLFNVL---RGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDY 223
+ + N + +G + K+ SP R L +F R +
Sbjct: 385 QTIGNTILKVKGSPEEMKSVPQDSPT------RSLFSGLFKSRSF 423
>gi|195607434|gb|ACG25547.1| ACR4 [Zea mays]
Length = 458
Score = 285 bits (729), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 141/243 (58%), Positives = 173/243 (71%), Gaps = 6/243 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEY K I+ MNPPRV IDN +C +ATVI VDS NK+GILL+V+QVL D+ L++KKAYIS
Sbjct: 16 DDEYQKFIQNMNPPRVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVKKAYIS 75
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVI----DYIQQRLETDASFAPSLRSSVGVMPTEEHT 117
SDGGWFMDVF V + G KI D+ V+ DYI + + D+ F PS R +VGV P+ +HT
Sbjct: 76 SDGGWFMDVFTVTNQSGHKITDESVLQGIKDYIYKSIGPDSCFLPSRRXAVGVEPSSDHT 135
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
IE TGTDRPGL SEV AVL L CNVV+AE+WTHN RAAAV+ VTD +G A+ D +R+
Sbjct: 136 LIELTGTDRPGLLSEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTDRESGLAVSDAERV 195
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKS 237
IK L+NV RG R AKT+++ G + ERRLHQ+MF+DRDYER K GR
Sbjct: 196 GRIKGRLYNVFRGRS--RDAKTAVATTGATHPERRLHQMMFEDRDYERRGKDDGRAAASG 253
Query: 238 SRP 240
S P
Sbjct: 254 SNP 256
>gi|226492720|ref|NP_001142223.1| uncharacterized protein LOC100274391 [Zea mays]
gi|194707686|gb|ACF87927.1| unknown [Zea mays]
gi|223947587|gb|ACN27877.1| unknown [Zea mays]
gi|414867235|tpg|DAA45792.1| TPA: ACR4 [Zea mays]
Length = 458
Score = 285 bits (729), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 141/243 (58%), Positives = 173/243 (71%), Gaps = 6/243 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEY K I+ MNPPRV IDN +C +ATVI VDS NK+GILL+V+QVL D+ L++KKAYIS
Sbjct: 16 DDEYQKFIQNMNPPRVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVKKAYIS 75
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVI----DYIQQRLETDASFAPSLRSSVGVMPTEEHT 117
SDGGWFMDVF V + G KI D+ V+ DYI + + D+ F PS R +VGV P+ +HT
Sbjct: 76 SDGGWFMDVFTVTNQSGHKITDESVLQGIKDYIYKSIGPDSCFLPSRRRAVGVEPSSDHT 135
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
IE TGTDRPGL SEV AVL L CNVV+AE+WTHN RAAAV+ VTD +G A+ D +R+
Sbjct: 136 LIELTGTDRPGLLSEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTDRESGLAVSDAERV 195
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKS 237
IK L+NV RG R AKT+++ G + ERRLHQ+MF+DRDYER K GR
Sbjct: 196 GRIKGRLYNVFRGRS--RDAKTAVATTGATHPERRLHQMMFEDRDYERRGKDDGRAAASG 253
Query: 238 SRP 240
S P
Sbjct: 254 SNP 256
>gi|414867234|tpg|DAA45791.1| TPA: hypothetical protein ZEAMMB73_762765 [Zea mays]
Length = 459
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 141/243 (58%), Positives = 173/243 (71%), Gaps = 6/243 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEY K I+ MNPPRV IDN +C +ATVI VDS NK+GILL+V+QVL D+ L++KKAYIS
Sbjct: 17 DDEYQKFIQNMNPPRVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVKKAYIS 76
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVI----DYIQQRLETDASFAPSLRSSVGVMPTEEHT 117
SDGGWFMDVF V + G KI D+ V+ DYI + + D+ F PS R +VGV P+ +HT
Sbjct: 77 SDGGWFMDVFTVTNQSGHKITDESVLQGIKDYIYKSIGPDSCFLPSRRRAVGVEPSSDHT 136
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
IE TGTDRPGL SEV AVL L CNVV+AE+WTHN RAAAV+ VTD +G A+ D +R+
Sbjct: 137 LIELTGTDRPGLLSEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTDRESGLAVSDAERV 196
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKS 237
IK L+NV RG R AKT+++ G + ERRLHQ+MF+DRDYER K GR
Sbjct: 197 GRIKGRLYNVFRGRS--RDAKTAVATTGATHPERRLHQMMFEDRDYERRGKDDGRAAASG 254
Query: 238 SRP 240
S P
Sbjct: 255 SNP 257
>gi|125544303|gb|EAY90442.1| hypothetical protein OsI_12028 [Oryza sativa Indica Group]
Length = 455
Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 139/231 (60%), Positives = 175/231 (75%), Gaps = 5/231 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEY K I++MNPPRVVIDN +C +ATV+ VDS NK+GILL+V+QVL ++ L++KKAYIS
Sbjct: 16 DDEYQKFIQKMNPPRVVIDNTSCKNATVVHVDSANKYGILLEVVQVLTELQLIVKKAYIS 75
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVID----YIQQRLETDASFAPSLRSSVGVMPTEEHT 117
SDGGWFMDVFNV D +G+KI D+ V+D YI + L D+ F PS R SVGV P+ ++T
Sbjct: 76 SDGGWFMDVFNVTDQNGQKIMDESVLDEIVKYIHKCLGADSCFLPSRRRSVGVEPSSDYT 135
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
IE TGTDRPGL SEV AVL +L CNVVNAE+WTHN RAAAV+ V D TG AI D +RL
Sbjct: 136 LIELTGTDRPGLLSEVSAVLTNLECNVVNAEVWTHNKRAAAVMQVMDRETGLAISDTQRL 195
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEK 228
+ IKE L V +G + + KT+++ GI + ERRLHQ+M +DRDYER +K
Sbjct: 196 ARIKERLSYVFKGSNRSQDTKTTVT-MGITHTERRLHQLMLEDRDYERYDK 245
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 87/205 (42%), Gaps = 16/205 (7%)
Query: 3 DEYAKLIRRMNP-PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
+ Y K +NP P V + N D +V+ + ++ +L + L D+ V+ +
Sbjct: 241 ERYDKDRTNVNPTPVVSVVNWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVD 300
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEF 121
S+G + + DG + + + Q LE A R S G+ +E
Sbjct: 301 SEGPEAYQEYYIRHIDGSPVNSEAERQRVIQCLEA----AIERRVSEGL-------KLEL 349
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
+ DR GL S+V + + V AE+ T D+A +V D + A+ D K L I+
Sbjct: 350 STGDRVGLLSDVTRIFRENGLTVTRAEVSTRGDKAVNTFYVRDAAGSSAV-DLKTLEAIR 408
Query: 182 ELLFNV---LRGYDDFRKAKTSLSP 203
+ + ++G+ D RK+ SP
Sbjct: 409 QEIGQTVLQVKGHPDHRKSPPQESP 433
>gi|125586650|gb|EAZ27314.1| hypothetical protein OsJ_11253 [Oryza sativa Japonica Group]
Length = 455
Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 139/231 (60%), Positives = 175/231 (75%), Gaps = 5/231 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEY K I++MNPPRVVIDN +C +ATV+ VDS NK+GILL+V+QVL ++ L++KKAYIS
Sbjct: 16 DDEYQKFIQKMNPPRVVIDNTSCKNATVVHVDSANKYGILLEVVQVLTELQLIVKKAYIS 75
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVID----YIQQRLETDASFAPSLRSSVGVMPTEEHT 117
SDGGWFMDVFNV D +G+KI D+ V+D YI + L D+ F PS R SVGV P+ ++T
Sbjct: 76 SDGGWFMDVFNVTDQNGQKIMDESVLDEIVKYIHKCLGADSCFLPSRRRSVGVEPSSDYT 135
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
IE TGTDRPGL SEV AVL +L CNVVNAE+WTHN RAAAV+ V D TG AI D +RL
Sbjct: 136 LIELTGTDRPGLLSEVSAVLTNLECNVVNAEVWTHNKRAAAVMQVMDRKTGLAISDTQRL 195
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEK 228
+ IKE L V +G + + KT+++ GI + ERRLHQ+M +DRDYER +K
Sbjct: 196 ARIKERLSYVFKGSNRSQDTKTTVT-MGITHTERRLHQLMLEDRDYERYDK 245
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 87/205 (42%), Gaps = 16/205 (7%)
Query: 3 DEYAKLIRRMNP-PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
+ Y K +NP P V + N D +V+ + ++ +L + L D+ V+ +
Sbjct: 241 ERYDKDRTNVNPTPVVSVVNWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVD 300
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEF 121
S+G + + DG + + + Q LE A R S G+ +E
Sbjct: 301 SEGPEAYQEYYIRHIDGSPVNSEAERQRVIQCLEA----AIERRVSEGL-------KLEL 349
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
+ DR GL S+V + + V AE+ T D+A +V D + A+ D K L I+
Sbjct: 350 STGDRVGLLSDVTRIFRENGLTVTRAEVSTRGDKAVNTFYVRDAAGSSAV-DLKTLEAIR 408
Query: 182 ELLFNV---LRGYDDFRKAKTSLSP 203
+ + ++G+ D RK+ SP
Sbjct: 409 QEIGQTVLQVKGHPDHRKSPPQESP 433
>gi|115453517|ref|NP_001050359.1| Os03g0413100 [Oryza sativa Japonica Group]
gi|41469089|gb|AAS07063.1| putative ACT domain containing protein, ACR4, with alternative
splicing forms [Oryza sativa Japonica Group]
gi|108708791|gb|ABF96586.1| ACT domain containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113548830|dbj|BAF12273.1| Os03g0413100 [Oryza sativa Japonica Group]
gi|125860400|dbj|BAF46923.1| ACT-domain repeat protein 7 [Oryza sativa Japonica Group]
gi|215693262|dbj|BAG88644.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 452
Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 139/231 (60%), Positives = 175/231 (75%), Gaps = 5/231 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEY K I++MNPPRVVIDN +C +ATV+ VDS NK+GILL+V+QVL ++ L++KKAYIS
Sbjct: 13 DDEYQKFIQKMNPPRVVIDNTSCKNATVVHVDSANKYGILLEVVQVLTELQLIVKKAYIS 72
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVID----YIQQRLETDASFAPSLRSSVGVMPTEEHT 117
SDGGWFMDVFNV D +G+KI D+ V+D YI + L D+ F PS R SVGV P+ ++T
Sbjct: 73 SDGGWFMDVFNVTDQNGQKIMDESVLDEIVKYIHKCLGADSCFLPSRRRSVGVEPSSDYT 132
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
IE TGTDRPGL SEV AVL +L CNVVNAE+WTHN RAAAV+ V D TG AI D +RL
Sbjct: 133 LIELTGTDRPGLLSEVSAVLTNLECNVVNAEVWTHNKRAAAVMQVMDRKTGLAISDTQRL 192
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEK 228
+ IKE L V +G + + KT+++ GI + ERRLHQ+M +DRDYER +K
Sbjct: 193 ARIKERLSYVFKGSNRSQDTKTTVT-MGITHTERRLHQLMLEDRDYERYDK 242
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 87/205 (42%), Gaps = 16/205 (7%)
Query: 3 DEYAKLIRRMNP-PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
+ Y K +NP P V + N D +V+ + ++ +L + L D+ V+ +
Sbjct: 238 ERYDKDRTNVNPTPVVSVVNWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVD 297
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEF 121
S+G + + DG + + + Q LE A R S G+ +E
Sbjct: 298 SEGPEAYQEYYIRHIDGSPVNSEAERQRVIQCLEA----AIERRVSEGL-------KLEL 346
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
+ DR GL S+V + + V AE+ T D+A +V D + A+ D K L I+
Sbjct: 347 STGDRVGLLSDVTRIFRENGLTVTRAEVSTRGDKAVNTFYVRDAAGSSAV-DLKTLEAIR 405
Query: 182 ELLFNV---LRGYDDFRKAKTSLSP 203
+ + ++G+ D RK+ SP
Sbjct: 406 QEIGQTVLQVKGHPDHRKSPPQESP 430
>gi|224119726|ref|XP_002318147.1| predicted protein [Populus trichocarpa]
gi|222858820|gb|EEE96367.1| predicted protein [Populus trichocarpa]
Length = 459
Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 141/243 (58%), Positives = 178/243 (73%), Gaps = 7/243 (2%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG 64
YAKL+RRMN PRVVI+N+ C ATVI+VD+V + G LL+V+Q L D+NLVI KAY+SSDG
Sbjct: 11 YAKLVRRMNSPRVVIENDVCEHATVIQVDTVYRQGTLLEVVQALADLNLVITKAYMSSDG 70
Query: 65 GWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGT 124
GWFM+VF+V D G KIRD+ +++ I++ LETDA S+ ++ ++EHT +E TGT
Sbjct: 71 GWFMNVFHVTDDGGNKIRDEGILNCIEKALETDAYMVKSMGK---MLLSKEHTLVELTGT 127
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
DRPGL SEVCAVL DL CNVVNAEIW HN RAAAV+HVTD STG AI+DP++LS IKELL
Sbjct: 128 DRPGLLSEVCAVLTDLSCNVVNAEIWAHNARAAAVIHVTDQSTGTAIEDPRQLSLIKELL 187
Query: 185 FNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQTCS 244
+NVL+G D+R S+S PG ++ RRLHQ+MF RD+ER +D S RP
Sbjct: 188 YNVLKGLGDYRTPTVSISSPGEIHIGRRLHQMMFAARDFERPLSE----DDNSVRPSVTV 243
Query: 245 MLC 247
C
Sbjct: 244 SDC 246
>gi|414867236|tpg|DAA45793.1| TPA: hypothetical protein ZEAMMB73_762765 [Zea mays]
Length = 433
Score = 272 bits (696), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 135/233 (57%), Positives = 166/233 (71%), Gaps = 6/233 (2%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVF 71
MNPPRV IDN +C +ATVI VDS NK+GILL+V+QVL D+ L++KKAYISSDGGWFMDVF
Sbjct: 1 MNPPRVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVKKAYISSDGGWFMDVF 60
Query: 72 NVIDCDGKKIRDKEVI----DYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 127
V + G KI D+ V+ DYI + + D+ F PS R +VGV P+ +HT IE TGTDRP
Sbjct: 61 TVTNQSGHKITDESVLQGIKDYIYKSIGPDSCFLPSRRRAVGVEPSSDHTLIELTGTDRP 120
Query: 128 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 187
GL SEV AVL L CNVV+AE+WTHN RAAAV+ VTD +G A+ D +R+ IK L+NV
Sbjct: 121 GLLSEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTDRESGLAVSDAERVGRIKGRLYNV 180
Query: 188 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
RG R AKT+++ G + ERRLHQ+MF+DRDYER K GR S P
Sbjct: 181 FRGRS--RDAKTAVATTGATHPERRLHQMMFEDRDYERRGKDDGRAAASGSNP 231
>gi|326500948|dbj|BAJ95140.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 443
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 132/223 (59%), Positives = 166/223 (74%), Gaps = 6/223 (2%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEYAKL+R MNPPRVVIDN+ DATVI+VDSVN HG LL V+QV+ D+NLVI+KAY SS
Sbjct: 8 DEYAKLVRGMNPPRVVIDNDASDDATVIRVDSVNSHGTLLAVVQVIADLNLVIRKAYFSS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVFNV D DG K+ D I YIQ+ LE + + P +R++VG++P+E++TSIE T
Sbjct: 68 DGSWFMDVFNVTDRDGNKVLDTPTISYIQKTLEAEDCYYPEVRNTVGIVPSEDYTSIELT 127
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD--HSTGYAIKDPKRLSTI 180
GTDRPGL SEVCAVLA + C V +AE+WTHN R AAVV VTD + G AI+D R++ I
Sbjct: 128 GTDRPGLLSEVCAVLAGMQCAVRSAELWTHNTRVAAVVQVTDAAKAAGGAIEDDARIADI 187
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDY 223
L N+LRG + R A + + ++ERRLHQ+MF+DRDY
Sbjct: 188 SRRLDNLLRGQNGVRAAAAA----SLTHKERRLHQMMFEDRDY 226
>gi|125562330|gb|EAZ07778.1| hypothetical protein OsI_30031 [Oryza sativa Indica Group]
Length = 463
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 139/235 (59%), Positives = 171/235 (72%), Gaps = 6/235 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEYAKL+RRMNPP VVIDN++C ATVI+VD V KHGILL+ +QVL D+NLVI KAYIS
Sbjct: 14 DDEYAKLVRRMNPPSVVIDNDSCDSATVIRVDRVKKHGILLEAVQVLVDLNLVITKAYIS 73
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSV-GVMPTEEHTSIE 120
SDG WFMDVFNV D DG K+++KEV D I++ LE++ P S G P+EE T IE
Sbjct: 74 SDGNWFMDVFNVTDQDGNKVQNKEVTDCIKKCLESEDYLVPPASSPAGGAAPSEETTCIE 133
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TGTDRPGL SEVCAVLA L CN+VNAE+WTH+ RAAAV+ +TD +TG ++D RLS +
Sbjct: 134 LTGTDRPGLLSEVCAVLASLRCNIVNAEVWTHDRRAAAVIQITDEATGLPVRDGGRLSQL 193
Query: 181 KELLFNVLRGYDDF----RKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVG 231
+ELL NV++G D RK T++S G N ERRLH++M DD D R + G
Sbjct: 194 QELLGNVMQGDGDGGGDSRKGSTAVS-LGAANAERRLHRLMLDDGDAGRCGEERG 247
>gi|125604137|gb|EAZ43462.1| hypothetical protein OsJ_28068 [Oryza sativa Japonica Group]
Length = 415
Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 139/235 (59%), Positives = 172/235 (73%), Gaps = 6/235 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEYAKL+RRMNPP VVIDN++C ATVI+VD V KHGILL+ +QVL D+NLVI KAYIS
Sbjct: 14 DDEYAKLVRRMNPPSVVIDNDSCDSATVIRVDRVKKHGILLEAVQVLVDLNLVITKAYIS 73
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLET-DASFAPSLRSSVGVMPTEEHTSIE 120
SDG WFMDVFNV D DG K+++KEV D I++ LE+ D P+ + G P+EE T IE
Sbjct: 74 SDGNWFMDVFNVTDQDGNKVQNKEVTDCIKKCLESEDYLVLPASSPAGGAAPSEETTCIE 133
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TGTDRPGL SEVCAVLA L CN+VNAE+WTH+ RAAAV+ +TD +TG ++D RLS +
Sbjct: 134 LTGTDRPGLLSEVCAVLASLRCNIVNAEVWTHDRRAAAVIQITDEATGLPVRDGGRLSQL 193
Query: 181 KELLFNVLRGYDDF----RKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVG 231
+ELL NV++G D RK T++S G N ERRLH++M DD D R + G
Sbjct: 194 QELLGNVMQGDGDGGGDSRKGSTAVS-LGAANAERRLHRLMLDDGDAGRCGEERG 247
>gi|414587548|tpg|DAA38119.1| TPA: ACR4 [Zea mays]
Length = 451
Score = 270 bits (691), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 133/222 (59%), Positives = 161/222 (72%), Gaps = 2/222 (0%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEYAKL+RRMNPPRVVIDN DATVIKVDSVN HG LL V+QV+ D+NLVI+KAY SS
Sbjct: 12 DEYAKLVRRMNPPRVVIDNEASDDATVIKVDSVNSHGTLLAVVQVIADLNLVIRKAYFSS 71
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMD FNV D DG K+ D I YIQ+ LE D + P ++VG++P+ ++TSIE T
Sbjct: 72 DGNWFMDAFNVTDRDGNKVLDASTISYIQKTLEVDDWYYPGAHNTVGIVPSGDYTSIELT 131
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDRPGL SEVCAVLA + V +AE+WTHN R AAVVHVTD TG AI+D R++ I
Sbjct: 132 GTDRPGLLSEVCAVLAAMGYAVQSAELWTHNTRVAAVVHVTDAETGGAIEDSARIADISA 191
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
L N+LR + D R + S +++ERRLHQ+MFDDR E
Sbjct: 192 RLGNLLREHSDVRAGGGAGSLA--LHKERRLHQMMFDDRGVE 231
>gi|115477501|ref|NP_001062346.1| Os08g0533600 [Oryza sativa Japonica Group]
gi|42761394|dbj|BAD11662.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|45735790|dbj|BAD13153.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|113624315|dbj|BAF24260.1| Os08g0533600 [Oryza sativa Japonica Group]
gi|125860404|dbj|BAF46925.1| ACT-domain repeat protein 8 [Oryza sativa Japonica Group]
gi|215692655|dbj|BAG88075.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215741115|dbj|BAG97610.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 463
Score = 270 bits (691), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 139/235 (59%), Positives = 172/235 (73%), Gaps = 6/235 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEYAKL+RRMNPP VVIDN++C ATVI+VD V KHGILL+ +QVL D+NLVI KAYIS
Sbjct: 14 DDEYAKLVRRMNPPSVVIDNDSCDSATVIRVDRVKKHGILLEAVQVLVDLNLVITKAYIS 73
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLET-DASFAPSLRSSVGVMPTEEHTSIE 120
SDG WFMDVFNV D DG K+++KEV D I++ LE+ D P+ + G P+EE T IE
Sbjct: 74 SDGNWFMDVFNVTDQDGNKVQNKEVTDCIKKCLESEDYLVLPASSPAGGAAPSEETTCIE 133
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TGTDRPGL SEVCAVLA L CN+VNAE+WTH+ RAAAV+ +TD +TG ++D RLS +
Sbjct: 134 LTGTDRPGLLSEVCAVLASLRCNIVNAEVWTHDRRAAAVIQITDEATGLPVRDGGRLSQL 193
Query: 181 KELLFNVLRGYDDF----RKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVG 231
+ELL NV++G D RK T++S G N ERRLH++M DD D R + G
Sbjct: 194 QELLGNVMQGDGDGGGDSRKGSTAVS-LGAANAERRLHRLMLDDGDAGRCGEERG 247
>gi|226498746|ref|NP_001152134.1| ACR4 [Zea mays]
gi|195653115|gb|ACG46025.1| ACR4 [Zea mays]
Length = 451
Score = 270 bits (691), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 133/222 (59%), Positives = 161/222 (72%), Gaps = 2/222 (0%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEYAKL+RRMNPPRVVIDN DATVIKVDSVN HG LL V+QV+ D+NLVI+KAY SS
Sbjct: 12 DEYAKLVRRMNPPRVVIDNEASDDATVIKVDSVNSHGTLLAVVQVIADLNLVIRKAYFSS 71
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMD FNV D DG K+ D I YIQ+ LE D + P ++VG++P+ ++TSIE T
Sbjct: 72 DGNWFMDAFNVTDRDGNKVLDASTISYIQKTLEVDDWYYPGAHNTVGIVPSGDYTSIELT 131
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDRPGL SEVCAVLA + V +AE+WTHN R AAVVHVTD TG AI+D R++ I
Sbjct: 132 GTDRPGLLSEVCAVLAAMGYAVQSAELWTHNTRVAAVVHVTDAETGGAIEDSARIADISA 191
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
L N+LR + D R + S +++ERRLHQ+MFDDR E
Sbjct: 192 RLGNLLREHSDVRAGGGAGSLA--LHKERRLHQMMFDDRGVE 231
>gi|357121213|ref|XP_003562315.1| PREDICTED: uncharacterized protein LOC100840593 [Brachypodium
distachyon]
Length = 453
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 134/244 (54%), Positives = 176/244 (72%), Gaps = 8/244 (3%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEY IR+MNPP +V+DN++C DAT+++VDS N++GILL+VIQVL D+NLVI KAYI+
Sbjct: 14 DDEYDNFIRKMNPPSIVVDNDSCNDATIVRVDSANEYGILLEVIQVLIDLNLVISKAYIT 73
Query: 62 SDGGWFMDVFNVIDCDGKKIRDK----EVIDYIQQRLETDASFAPSLRSSVGVMPTEEHT 117
SDGGWFMDVFN+ D +GKK++DK ++ DYI++ L D+ + P+ R SV V + H
Sbjct: 74 SDGGWFMDVFNITDKEGKKLKDKATLAQIEDYIRKSLGADSRYLPARRRSVDVAASANHN 133
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
IE TGTDRPGL SEV AVLA+L CNVV+AEIWTHN RAAAV+ VTD TG A+ D +RL
Sbjct: 134 VIELTGTDRPGLLSEVSAVLANLKCNVVSAEIWTHNTRAAAVMQVTDQDTGLAVTDTERL 193
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSP-PGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
IKE L +LRG + R A ++S + ERRLHQ+M DD D E++++ ++
Sbjct: 194 ERIKERLSYLLRGGNLSRGAAMAVSSGTSTTHTERRLHQMMLDDGDCEQLQR---HASNQ 250
Query: 237 SSRP 240
S RP
Sbjct: 251 SQRP 254
>gi|212274877|ref|NP_001130980.1| uncharacterized protein LOC100192085 [Zea mays]
gi|194689578|gb|ACF78873.1| unknown [Zea mays]
gi|194690618|gb|ACF79393.1| unknown [Zea mays]
gi|194701104|gb|ACF84636.1| unknown [Zea mays]
gi|195614180|gb|ACG28920.1| ACR4 [Zea mays]
gi|223949731|gb|ACN28949.1| unknown [Zea mays]
gi|414871683|tpg|DAA50240.1| TPA: ACR4 [Zea mays]
Length = 451
Score = 266 bits (681), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 135/243 (55%), Positives = 173/243 (71%), Gaps = 8/243 (3%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEY IR+MNPPR+VIDN + A+AT+++VDS N++GILL+VIQV+ D+NLVI KAYI+
Sbjct: 15 DDEYDNFIRKMNPPRIVIDNESSAEATIVRVDSANEYGILLEVIQVMIDLNLVIGKAYIT 74
Query: 62 SDGGWFMDVFNVIDCDGKKIRDK----EVIDYIQQRLETDASFAPSLRSSVGVMPTEEHT 117
SDGGWFMDVFNV D +GKKI+D+ ++ DYI++ L D+ + PS R SV V +H
Sbjct: 75 SDGGWFMDVFNVTDKEGKKIKDEATLTQIEDYIRKSLGADSRYIPSRRRSVDVAAAADHN 134
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
IE TGTDRPGL SEV AVL L CNVV+AEIWTHN RAAAV+ VTD TG A+ D +RL
Sbjct: 135 IIELTGTDRPGLLSEVSAVLTSLKCNVVSAEIWTHNTRAAAVMRVTDEDTGLAVTDAERL 194
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKS 237
I+E L + RG + R A S S + ERRLHQ+M DD DYE++++ + +S
Sbjct: 195 ERIREKLSYLFRGGNLSRGATVS-SRTATTHTERRLHQMMLDDGDYEQLQR---QAPGQS 250
Query: 238 SRP 240
RP
Sbjct: 251 QRP 253
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 83/213 (38%), Gaps = 24/213 (11%)
Query: 2 DDEYAKLIRRM----NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKK 57
D +Y +L R+ P V + N D +V+ + ++ +L + L D+ V+
Sbjct: 236 DGDYEQLQRQAPGQSQRPNVTVRNWNDKDYSVVTIRCKDRSKLLFDTVCTLTDLQYVVFH 295
Query: 58 AYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHT 117
A I + F V +G + + + Q LE A R S GV
Sbjct: 296 ANIDAKDNQAYQEFYVRHVNGSPMNTETERLRVIQCLEA----AIERRVSEGV------- 344
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
+E D+ GL SEV + + V AE+ T A +V S G A+ D K +
Sbjct: 345 KLELCTNDKVGLLSEVTRIFRENSLTVTRAEVTTRGRMAVNTFYVRG-SAGEAV-DQKAI 402
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE 210
+I+E + + L + K PP +E
Sbjct: 403 DSIREAIGHSL-------QVKGQAEPPEPQKKE 428
>gi|115458090|ref|NP_001052645.1| Os04g0391500 [Oryza sativa Japonica Group]
gi|38347211|emb|CAD40537.2| OSJNBa0055C08.5 [Oryza sativa Japonica Group]
gi|113564216|dbj|BAF14559.1| Os04g0391500 [Oryza sativa Japonica Group]
gi|116309365|emb|CAH66445.1| OSIGBa0145N07.1 [Oryza sativa Indica Group]
gi|125548085|gb|EAY93907.1| hypothetical protein OsI_15680 [Oryza sativa Indica Group]
gi|125860408|dbj|BAF46927.1| ACT-domain repeat protein 6 [Oryza sativa Japonica Group]
gi|215695164|dbj|BAG90355.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 470
Score = 266 bits (681), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 130/218 (59%), Positives = 162/218 (74%), Gaps = 2/218 (0%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEYAKL+R MNPPRVV+DN C +ATVI+VDSV+ HG LL V+QV+ D+ LVI+KAY S
Sbjct: 15 DDEYAKLVRGMNPPRVVVDNEACDEATVIRVDSVSSHGTLLAVVQVIADLGLVIRKAYFS 74
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEF 121
SDG WFMDVFNV D DG K+ D + I YIQ LE D + P +R++VG++P EE+T IE
Sbjct: 75 SDGSWFMDVFNVTDRDGNKVLDDQTISYIQTTLEADDWYYPEVRNTVGIVPAEEYTVIEL 134
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT-DHSTGYAIKDPKRLSTI 180
TGTDRPGL SEVCAVLA + C V +AE+WTHN R AAVVHVT D +G AI+D R++ I
Sbjct: 135 TGTDRPGLLSEVCAVLAGMRCAVRSAELWTHNTRVAAVVHVTDDGGSGGAIEDEARIADI 194
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMF 218
L N+LRG R A + +P G+ ++ERRLHQ+MF
Sbjct: 195 STRLGNLLRGQSGVRAAAAA-APGGLTHKERRLHQMMF 231
>gi|242038905|ref|XP_002466847.1| hypothetical protein SORBIDRAFT_01g015160 [Sorghum bicolor]
gi|241920701|gb|EER93845.1| hypothetical protein SORBIDRAFT_01g015160 [Sorghum bicolor]
Length = 453
Score = 263 bits (673), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 135/244 (55%), Positives = 174/244 (71%), Gaps = 8/244 (3%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEY IR+MNPPR+VIDN + A+AT+++VDS N++GILL+VIQV+ D+NLVI KAYI+
Sbjct: 15 DDEYDNFIRKMNPPRIVIDNESSAEATIVRVDSANEYGILLEVIQVMIDLNLVISKAYIT 74
Query: 62 SDGGWFMDVFNVIDCDGKKIRDK----EVIDYIQQRLETDASFAPSLRSSVGVMPTEEHT 117
SDGGWFMDVFNV D +GKKI+D+ ++ DYI++ L D+ + PS R SV V +H
Sbjct: 75 SDGGWFMDVFNVTDKEGKKIKDEATLTQIEDYIRKSLGADSRYIPSRRRSVDVAAAADHN 134
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
IE TGTDRPGL SEV AVLA L CNVV+AEIWTHN RAAAV+ VTD T A+ D +RL
Sbjct: 135 VIELTGTDRPGLLSEVSAVLASLKCNVVSAEIWTHNARAAAVMRVTDEDTRLAVTDTERL 194
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSP-PGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
I+E L +LRG + R A ++S + ERRLHQ+M DD DYE++++ +
Sbjct: 195 ERIREKLSYLLRGGNLSRGAAMAVSSGTATTHTERRLHQMMLDDCDYEQLQQL---APGQ 251
Query: 237 SSRP 240
S RP
Sbjct: 252 SQRP 255
Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 85/210 (40%), Gaps = 19/210 (9%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + N D +V+ + ++ +L + L D+ V+ A I + F V
Sbjct: 255 PNVTVRNWNDKDYSVVTIRCKDRPKLLFDTVCTLTDLQYVVFHANIDAKDNQAYQEFYVR 314
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
+G + + + Q LE A R S GV +E D+ GL SEV
Sbjct: 315 HVNGSPMNTETERLRVIQCLEA----AIERRVSEGV-------KLELCTNDKVGLLSEVT 363
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL--RGYD 192
+ + V AE+ T A +V STG + D K + +I++ + + L +G
Sbjct: 364 RIFRENSLTVTRAEVTTRGRMAVNTFYVRG-STGEDV-DQKAIDSIRQAIGHSLQVKGQP 421
Query: 193 DFRKAKTSLSPPGI----MNRERRLHQIMF 218
+ ++A+ SP + R R L+ F
Sbjct: 422 EPQEAQKKESPTWFLFANLFRPRSLYSFGF 451
>gi|449445562|ref|XP_004140541.1| PREDICTED: uncharacterized protein LOC101218687 [Cucumis sativus]
gi|449526489|ref|XP_004170246.1| PREDICTED: uncharacterized LOC101218687 [Cucumis sativus]
Length = 451
Score = 263 bits (672), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 129/218 (59%), Positives = 162/218 (74%), Gaps = 1/218 (0%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+DDE+ KL+ RMNPPRV +DN++ AT+IKVDS NK G LL+V+QVLND+NL+I++AYI
Sbjct: 10 LDDEFEKLVNRMNPPRVTVDNDSSRKATLIKVDSANKRGSLLEVVQVLNDLNLIIRRAYI 69
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDG WFMDVF+V D G K+ + +V + IQQ L SLR SVGV EEHT+IE
Sbjct: 70 SSDGEWFMDVFHVTDQRGNKLSENDVAERIQQSLGPRGRSFRSLRRSVGVQAAEEHTTIE 129
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SEV AVLADL CNVV AE+WTHN R A+VV++TD +TG+ I DP RL I
Sbjct: 130 LTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDEATGFPIDDPDRLGKI 189
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMF 218
K+LL VL+G D R A T++S G ++ERRLHQ+M+
Sbjct: 190 KQLLLFVLKGDRDKRSANTAVS-VGSTHKERRLHQMMY 226
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 16/181 (8%)
Query: 15 PRVVIDNNTCADA--TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
P V ++ +CAD TV+ + S ++ +L + L D+ V+ A + ++G +
Sbjct: 247 PLVTVE--SCADKGYTVVNLRSPDRPKLLFDTVCTLTDMQYVVYHATVIAEGPEATQEYY 304
Query: 73 VIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSE 132
+ DG I + + LE A R+S G+ +E DR GL S+
Sbjct: 305 IRHMDGSPISSEAERQRVIHCLEA----AIRRRTSEGI-------RLELCSDDRAGLLSD 353
Query: 133 VCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYD 192
V + + +V AE+ T +A V +VTD S G +K + KE+ VL D
Sbjct: 354 VTRIFRENGLSVTRAEVTTRGTQAVNVFYVTDAS-GNPVKSEMIEAVRKEIGLTVLCVKD 412
Query: 193 D 193
D
Sbjct: 413 D 413
>gi|147855097|emb|CAN83845.1| hypothetical protein VITISV_001862 [Vitis vinifera]
Length = 465
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 131/224 (58%), Positives = 163/224 (72%), Gaps = 1/224 (0%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+DDE+ KL+ RMNPPRV +DN + AT+IKVDS N+ G LL+V+QVLND++L+I++AYI
Sbjct: 10 VDDEFEKLVIRMNPPRVTVDNASSRTATLIKVDSANRRGSLLEVVQVLNDMDLIIRRAYI 69
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDG WFMDVF+V D G K+ + +V + IQQ L A SLR SVGV EHT+IE
Sbjct: 70 SSDGEWFMDVFHVTDQKGNKLSEDDVAERIQQSLGPRARSFRSLRRSVGVQAANEHTTIE 129
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SEV AVLADL CNVV AE+WTHN R A+VV++TD TG I DP RL I
Sbjct: 130 LTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDDETGLPIDDPDRLVKI 189
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
K+LL VL+G D R A T++S G N +RRLHQ+M+ DRDY+
Sbjct: 190 KQLLLYVLKGDRDKRSANTAVS-VGSTNTQRRLHQMMYADRDYD 232
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 81/190 (42%), Gaps = 16/190 (8%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ++N TV+ + ++ +L + L D+ V+ A + ++G + +
Sbjct: 244 PLVTVENFADKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVFHATVIAEGPEAYQEYYIR 303
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG I + QQR+ A R+S G+ +E DR GL S+V
Sbjct: 304 HVDGCPISSEAE----QQRVILCLEAAIRRRTSEGI-------RLELCSEDRVGLLSDVT 352
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDF 194
+ + +V AE+ T +A +VTD S+G +K + KE+ +LR DD
Sbjct: 353 RIFRENGLSVTRAEVTTRGSQAVNAFYVTD-SSGNPVKSETIEAVRKEIGLTILRVKDD- 410
Query: 195 RKAKTSLSPP 204
S SPP
Sbjct: 411 ---AYSKSPP 417
>gi|219885449|gb|ACL53099.1| unknown [Zea mays]
gi|414867237|tpg|DAA45794.1| TPA: hypothetical protein ZEAMMB73_762765 [Zea mays]
Length = 440
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 131/229 (57%), Positives = 162/229 (70%), Gaps = 6/229 (2%)
Query: 16 RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVID 75
RV IDN +C +ATVI VDS NK+GILL+V+QVL D+ L++KKAYISSDGGWFMDVF V +
Sbjct: 12 RVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVKKAYISSDGGWFMDVFTVTN 71
Query: 76 CDGKKIRDKEVI----DYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFS 131
G KI D+ V+ DYI + + D+ F PS R +VGV P+ +HT IE TGTDRPGL S
Sbjct: 72 QSGHKITDESVLQGIKDYIYKSIGPDSCFLPSRRRAVGVEPSSDHTLIELTGTDRPGLLS 131
Query: 132 EVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGY 191
EV AVL L CNVV+AE+WTHN RAAAV+ VTD +G A+ D +R+ IK L+NV RG
Sbjct: 132 EVSAVLTSLECNVVSAELWTHNGRAAAVMQVTDRESGLAVSDAERVGRIKGRLYNVFRGR 191
Query: 192 DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 240
R AKT+++ G + ERRLHQ+MF+DRDYER K GR S P
Sbjct: 192 S--RDAKTAVATTGATHPERRLHQMMFEDRDYERRGKDDGRAAASGSNP 238
>gi|225425204|ref|XP_002266641.1| PREDICTED: uncharacterized protein LOC100250497 [Vitis vinifera]
gi|296088702|emb|CBI38152.3| unnamed protein product [Vitis vinifera]
Length = 447
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 131/224 (58%), Positives = 163/224 (72%), Gaps = 1/224 (0%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+DDE+ KL+ RMNPPRV +DN + AT+IKVDS N+ G LL+V+QVLND++L+I++AYI
Sbjct: 10 VDDEFEKLVIRMNPPRVTVDNASSRTATLIKVDSANRRGSLLEVVQVLNDMDLIIRRAYI 69
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDG WFMDVF+V D G K+ + +V + IQQ L A SLR SVGV EHT+IE
Sbjct: 70 SSDGEWFMDVFHVTDQKGNKLSEDDVAERIQQSLGPRARSFRSLRRSVGVQAANEHTTIE 129
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SEV AVLADL CNVV AE+WTHN R A+VV++TD TG I DP RL I
Sbjct: 130 LTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDDETGLPIDDPDRLVKI 189
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
K+LL VL+G D R A T++S G N +RRLHQ+M+ DRDY+
Sbjct: 190 KQLLLYVLKGDRDKRSANTAVS-VGSTNTQRRLHQMMYADRDYD 232
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 81/190 (42%), Gaps = 16/190 (8%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ++N TV+ + ++ +L + L D+ V+ A + ++G + +
Sbjct: 244 PLVTVENFADKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVFHATVIAEGPEAYQEYYIR 303
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG I + QQR+ A R+S G+ +E DR GL S+V
Sbjct: 304 HVDGCPISSEAE----QQRVILCLEAAIRRRTSEGI-------RLELCSEDRVGLLSDVT 352
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDF 194
+ + +V AE+ T +A +VTD S+G +K + KE+ +LR DD
Sbjct: 353 RIFRENGLSVTRAEVTTRGSQAVNAFYVTD-SSGNPVKSETIEAVRKEIGLTILRVKDD- 410
Query: 195 RKAKTSLSPP 204
S SPP
Sbjct: 411 ---AYSKSPP 417
>gi|242040599|ref|XP_002467694.1| hypothetical protein SORBIDRAFT_01g032575 [Sorghum bicolor]
gi|241921548|gb|EER94692.1| hypothetical protein SORBIDRAFT_01g032575 [Sorghum bicolor]
Length = 427
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 135/244 (55%), Positives = 174/244 (71%), Gaps = 14/244 (5%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVF 71
MNPPRV IDN +C +ATVI VDS NK+G+LL+V+QVL D+ L++KKAYISSDGGWFMDVF
Sbjct: 1 MNPPRVTIDNTSCPNATVIHVDSANKYGVLLEVVQVLTDLKLIVKKAYISSDGGWFMDVF 60
Query: 72 NVIDCDGKKIRDKEVI----DYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 127
NV + G KI D+ V+ D I + + D+ PS R ++GV P+ ++T IE TGTDRP
Sbjct: 61 NVTNQGGHKIMDESVLEGIKDCIYKSIGPDSCLLPSRRRAIGVEPSSDYTLIELTGTDRP 120
Query: 128 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 187
GL SEV AVL +L CNVVNAE+WTHN+RAAAV+ VTD +G AI D +RL IKE L NV
Sbjct: 121 GLLSEVSAVLTNLECNVVNAELWTHNERAAAVMQVTDRKSGLAISDAERLGRIKERLCNV 180
Query: 188 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQTCSMLC 247
+G R AKT+++ GI + ERRLHQ+M +DRDY+R +K D++S T SM+
Sbjct: 181 FKGRS--RDAKTTVA-MGITHTERRLHQMMLEDRDYDRHDK------DRASGSPT-SMVS 230
Query: 248 FMEW 251
+ W
Sbjct: 231 VVNW 234
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 77/185 (41%), Gaps = 24/185 (12%)
Query: 26 DATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRD-- 83
D +V+ + ++ +L + L D+ V+ + ++G + + DG +
Sbjct: 238 DYSVVTIRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPDAYQDYYIRHIDGSPVNSEA 297
Query: 84 --KEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLH 141
K +I ++ +E S E +E + DR GL S+V + +
Sbjct: 298 ERKRIIHCLEAAIERRVS---------------EGLKLELSTGDRVGLLSDVTRIFRENG 342
Query: 142 CNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV---LRGYDDFRKAK 198
V AE+ T D+A +V D + G ++ + K L I++ + ++G+ D K+
Sbjct: 343 LTVTRAEVSTKGDKAINTFYVRD-AAGSSV-ELKTLEAIRQEIGQTVLQVKGHPDQPKSL 400
Query: 199 TSLSP 203
T SP
Sbjct: 401 TQESP 405
>gi|242082075|ref|XP_002445806.1| hypothetical protein SORBIDRAFT_07g026090 [Sorghum bicolor]
gi|241942156|gb|EES15301.1| hypothetical protein SORBIDRAFT_07g026090 [Sorghum bicolor]
Length = 461
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 129/217 (59%), Positives = 159/217 (73%), Gaps = 2/217 (0%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG 64
YAKL+RRMNPPRVVIDN+ C +ATVI+VD V KHGILL+ +QVL D+NLVI KAYISSDG
Sbjct: 16 YAKLVRRMNPPRVVIDNDACDNATVIRVDRVKKHGILLEAVQVLVDLNLVITKAYISSDG 75
Query: 65 GWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGT 124
WFMDVFNV D DG K++++EVID+IQ+ LE+D P V P ++ TSIE TG
Sbjct: 76 NWFMDVFNVTDQDGSKLQNREVIDHIQKCLESDGYLPPPANGGF-VPPEDQFTSIELTGA 134
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
DRPGL SEVCAVLA L CN+V AE+WTH+ RAAAV+ +TD +TG AI D RLS +ELL
Sbjct: 135 DRPGLLSEVCAVLAALSCNIVKAEVWTHDRRAAAVIQITDEATGLAIHDVGRLSRAQELL 194
Query: 185 FNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDR 221
N+++ + T +S G ERRLH++M DDR
Sbjct: 195 SNLMQSDGRCNRGATGVS-VGTARTERRLHKMMLDDR 230
>gi|255547636|ref|XP_002514875.1| amino acid binding protein, putative [Ricinus communis]
gi|223545926|gb|EEF47429.1| amino acid binding protein, putative [Ricinus communis]
Length = 450
Score = 260 bits (664), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 131/224 (58%), Positives = 164/224 (73%), Gaps = 1/224 (0%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDE+ KL+ RMNPPRV +DN T AT+IKVDS NK G LL+V+QVL D++L+I++AYI
Sbjct: 10 MDDEFEKLVIRMNPPRVTVDNATSRKATLIKVDSANKRGSLLEVVQVLTDLDLLIRRAYI 69
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDG WFMDVF+V D G K+ + +V + IQQ L A SLR SVGV E+T+IE
Sbjct: 70 SSDGEWFMDVFHVTDQHGNKLSEDDVAERIQQSLGPRACSFRSLRRSVGVQTASENTTIE 129
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SEV AVLADL CNVV AE+WTHN R A+VV++TD TG I +P RL+ I
Sbjct: 130 LTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDEVTGSPINEPDRLTKI 189
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
K+LL VL+G D R A T++S G ++ERRLHQ+M+ DRDY+
Sbjct: 190 KQLLLYVLKGDRDKRSANTAVS-VGSTHKERRLHQMMYADRDYD 232
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 86/199 (43%), Gaps = 22/199 (11%)
Query: 15 PRVVIDNNTCADA--TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
P V ++N CAD TV+ + ++ +L + L D+ V+ A I ++G +
Sbjct: 247 PLVTVEN--CADKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHATIIAEGPEAYQEYY 304
Query: 73 VIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSE 132
+ DG I + +QR+ A R+ G+ +E DR GL SE
Sbjct: 305 IRHMDGSPISSEAE----RQRVINCLEAAIRRRNPEGI-------RLELCSEDRIGLLSE 353
Query: 133 VCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYD 192
V + + +V AE+ T + +A +VTD S GY +K + KE+ +LR D
Sbjct: 354 VTRIFRENGLSVTRAEVTTRDSQAVNAFYVTDAS-GYPVKSETIEAVRKEIGLTILRVKD 412
Query: 193 DFRKAKTSLSPPGIMNRER 211
D S SPP R R
Sbjct: 413 D------SNSPPPQEERGR 425
>gi|302818108|ref|XP_002990728.1| hypothetical protein SELMODRAFT_132226 [Selaginella moellendorffii]
gi|300141466|gb|EFJ08177.1| hypothetical protein SELMODRAFT_132226 [Selaginella moellendorffii]
Length = 466
Score = 259 bits (663), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 129/228 (56%), Positives = 162/228 (71%), Gaps = 5/228 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D +Y LI R+N P VVIDN++C DAT++KVDS NKHGILL+V+QVL D++L I KAYI
Sbjct: 9 FDPDYDTLISRLNAPSVVIDNSSCDDATLVKVDSANKHGILLEVVQVLTDLDLTISKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL----ETDASFAPSLRSSVGVMPTEEH 116
SSDGGWFMDVF+V D G K+RD+ +IDYIQQ L T + SL +VG + H
Sbjct: 69 SSDGGWFMDVFHVTDKLGHKLRDQGIIDYIQQSLGDAQATTSQVKTSLAPTVGTQSSGGH 128
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T+IE +G DRPGL SE+ VL + CNVV AE+WTHN R A VV+VTD +TG IKDP++
Sbjct: 129 TAIELSGRDRPGLLSEISGVLTGMTCNVVAAEVWTHNKRVACVVYVTDEATGCPIKDPEK 188
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
L+ +KE L VLRG D+ R A T S G+ + ERRLHQ+M DRDY+
Sbjct: 189 LARMKEQLSQVLRGDDENRLATTDFS-SGLTHTERRLHQMMLADRDYD 235
Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 13/153 (8%)
Query: 16 RVVIDNNTCADA--TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
R VI C + +V+ V ++ +L + L D+ V+ A +DG + + +
Sbjct: 252 RPVISLRNCLEKGYSVVSVQCKDRPKLLFDTVCTLTDMEYVVFHASARADGPYAYQEYYI 311
Query: 74 IDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEV 133
DG + +D Q+R+ A R S G+ +E DR GL S+V
Sbjct: 312 RHMDGCTLD----LDAEQERVVKCLEAAIERRVSEGL-------RLELCTRDRVGLLSDV 360
Query: 134 CAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
V + +V A++ T DRA V +VTD S
Sbjct: 361 TRVFREKGLSVTRADVSTRGDRAVNVFYVTDTS 393
>gi|294464028|gb|ADE77534.1| unknown [Picea sitchensis]
Length = 439
Score = 259 bits (663), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 128/222 (57%), Positives = 164/222 (73%), Gaps = 2/222 (0%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVF 71
MN PRVVIDN C +AT++KVDS NKHGILL+ +QVL D+ L I KA +SSDG WFMDVF
Sbjct: 1 MNSPRVVIDNAVCGNATLVKVDSANKHGILLEAVQVLTDLKLNINKANVSSDGRWFMDVF 60
Query: 72 NVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGV-MPTEEHTSIEFTGTDRPGLF 130
V D +GKK+ D+ VI YI++ LET+ PS SVGV + ++HT+IE TGTDRPGL
Sbjct: 61 YVTDENGKKLTDEGVIGYIEKTLETNPCILPSFGKSVGVEVAADQHTAIELTGTDRPGLL 120
Query: 131 SEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRG 190
SE+ AVL+DL CNVV AE+WTHN R A +V+VTD TG I D +++ I+ELL NV+RG
Sbjct: 121 SEIFAVLSDLKCNVVEAEVWTHNRRVACLVYVTDEETGAPIDDGQKICKIEELLRNVMRG 180
Query: 191 YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGR 232
+ R AKT ++ G+ + ERRLHQ+MF DRDYE+++ VGR
Sbjct: 181 NSNIRGAKT-VASMGLTHTERRLHQLMFADRDYEKLDGTVGR 221
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 85/193 (44%), Gaps = 14/193 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ++N +V+ V ++ +L V+ L D+ V+ A I S G + +
Sbjct: 234 PHVTVENCLERGYSVVNVQCKDRPKLLFDVVCTLTDMEYVVFHATIDSQGPQTHQEYYIR 293
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG + + + Q LE A R+S GV +E DR GL S+V
Sbjct: 294 HTDGCPVNSEAERQRVIQCLEA----AIRRRASEGV-------RLELCTNDRVGLLSDVT 342
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI-KELLFNVLRGYDD 193
+ + +V AE+ T D+A V +VTD + G + DPK + + +E+ +L+ D+
Sbjct: 343 RIFRENGMSVTRAEVSTRGDKAVNVFYVTD-AAGNPV-DPKTVEAVRREIGLTILQVKDN 400
Query: 194 FRKAKTSLSPPGI 206
K+ P I
Sbjct: 401 CMDTKSPRREPAI 413
>gi|302810022|ref|XP_002986703.1| hypothetical protein SELMODRAFT_124581 [Selaginella moellendorffii]
gi|300145591|gb|EFJ12266.1| hypothetical protein SELMODRAFT_124581 [Selaginella moellendorffii]
Length = 466
Score = 259 bits (662), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 129/228 (56%), Positives = 162/228 (71%), Gaps = 5/228 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D +Y LI R+N P VVIDN++C DAT++KVDS NKHGILL+V+QVL D++L I KAYI
Sbjct: 9 FDPDYDTLISRLNAPSVVIDNSSCDDATLVKVDSANKHGILLEVVQVLTDLDLTISKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL----ETDASFAPSLRSSVGVMPTEEH 116
SSDGGWFMDVF+V D G K+RD+ +IDYIQQ L T + SL +VG + H
Sbjct: 69 SSDGGWFMDVFHVTDKLGHKLRDQGIIDYIQQSLGDAQATTSQVKTSLAPTVGTQSSGGH 128
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T+IE +G DRPGL SE+ VL + CNVV AE+WTHN R A VV+VTD +TG IKDP++
Sbjct: 129 TAIELSGRDRPGLLSEISGVLTGMTCNVVAAEVWTHNKRVACVVYVTDEATGCPIKDPEK 188
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
L+ +KE L VLRG D+ R A T S G+ + ERRLHQ+M DRDY+
Sbjct: 189 LARMKERLSQVLRGDDENRLATTDFS-SGLTHTERRLHQMMLADRDYD 235
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 13/153 (8%)
Query: 16 RVVIDNNTCADA--TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
R VI C + +V+ V ++ +L + L D+ V+ A +DG + + +
Sbjct: 252 RPVISLRNCLEKGYSVVSVQCKDRPKLLFDTVCTLTDMEYVVFHASARADGPYAYQEYYI 311
Query: 74 IDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEV 133
DG + +D Q+R+ A R S G+ +E DR GL S+V
Sbjct: 312 RHMDGCTLD----LDAEQERVVKCLEAAIERRVSEGL-------RLELCTRDRVGLLSDV 360
Query: 134 CAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
V + +V A++ T DRA V +VTD S
Sbjct: 361 TRVFREKGLSVTRADVSTRGDRAVNVFYVTDTS 393
>gi|414869679|tpg|DAA48236.1| TPA: ACR4 [Zea mays]
Length = 453
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 126/215 (58%), Positives = 156/215 (72%), Gaps = 8/215 (3%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG 64
YAKL+RRMNPPRVVIDN++C +ATVI+VD VNKHGILL+ +QVL D+NLVI KAYISSDG
Sbjct: 16 YAKLVRRMNPPRVVIDNDSCGNATVIRVDRVNKHGILLEAVQVLVDLNLVITKAYISSDG 75
Query: 65 GWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGT 124
WFM VFNV D DG K+ ++EVID+IQ+ LE+D P +P ++ TSIE TG
Sbjct: 76 NWFMHVFNVTDQDGSKLHNREVIDHIQKCLESDGYLVPPANGY--ALPEDQFTSIELTGA 133
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
DRPGL SEVCAVLA L CN+V AE+WTH+ R AAV+ VTD +TG A+ D RLS ++ELL
Sbjct: 134 DRPGLLSEVCAVLATLSCNIVKAEVWTHDGRTAAVIQVTDEATGRAVHDAGRLSRVQELL 193
Query: 185 FNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFD 219
+V+RG + T +S ERRLH +M D
Sbjct: 194 RDVMRGDGTCNRGGTGISA------ERRLHTLMLD 222
>gi|115454015|ref|NP_001050608.1| Os03g0598100 [Oryza sativa Japonica Group]
gi|28875985|gb|AAO59994.1| putative ACT domain repeat protein [Oryza sativa Japonica Group]
gi|108709666|gb|ABF97461.1| ACT domain containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113549079|dbj|BAF12522.1| Os03g0598100 [Oryza sativa Japonica Group]
gi|125860402|dbj|BAF46924.1| ACT-domain repeat protein 5 [Oryza sativa Japonica Group]
gi|222625325|gb|EEE59457.1| hypothetical protein OsJ_11646 [Oryza sativa Japonica Group]
Length = 453
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 133/244 (54%), Positives = 172/244 (70%), Gaps = 8/244 (3%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEY IR+MNPPR+ IDN++C DAT+++VDS N++GILL+VIQVL D+NLVI KAYI+
Sbjct: 14 DDEYDNFIRKMNPPRIEIDNDSCNDATIVRVDSANEYGILLEVIQVLIDLNLVISKAYIT 73
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVI----DYIQQRLETDASFAPSLRSSVGVMPTEEHT 117
SDGGW MDVFN+ D +G+K++DK I DYI + L D+ + PS R SV V + +H
Sbjct: 74 SDGGWVMDVFNITDKEGQKLKDKATIARIEDYICKSLGADSRYIPSRRRSVDVAASSDHN 133
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
IE TGTDRPGL SEV AVLA L CNVV+AEIWTHN RAAAV+ VTD TG A+ D RL
Sbjct: 134 VIELTGTDRPGLLSEVSAVLASLKCNVVSAEIWTHNTRAAAVMRVTDEGTGSAVTDADRL 193
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGI-MNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
I++ L +LRG + R A ++S + ERRLHQ+M DD D+E++ + ++
Sbjct: 194 ERIRDRLSYLLRGGNLSRGAAMAVSTGTCSTHTERRLHQMMLDDGDHEQLHR---HPPNQ 250
Query: 237 SSRP 240
S RP
Sbjct: 251 SQRP 254
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 77/189 (40%), Gaps = 18/189 (9%)
Query: 1 MDDEYAKLIRRMNP-----PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVI 55
+DD + + R P P V + N D +V+ + ++ +L + L D++ V+
Sbjct: 235 LDDGDHEQLHRHPPNQSQRPNVTVSNWNDKDYSVVTIRCKDRPKLLFDTVCTLTDLHYVV 294
Query: 56 KKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE 115
A I + F V +G + + + Q LE A R S GV
Sbjct: 295 FHANIDAKDNQAYQEFYVRHVNGSPMHTEADRLRVIQCLEA----AIERRVSEGV----- 345
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
+E D+ GL SEV + + V AE+ T A +V D STG + D K
Sbjct: 346 --KLELCTNDKVGLLSEVTRIFRENSLTVTRAEVSTRGRMAVNTFYVRD-STGGTV-DQK 401
Query: 176 RLSTIKELL 184
+ +I++ +
Sbjct: 402 TIDSIRQAI 410
>gi|26452308|dbj|BAC43240.1| unknown protein [Arabidopsis thaliana]
Length = 425
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 131/223 (58%), Positives = 167/223 (74%), Gaps = 3/223 (1%)
Query: 22 NTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKI 81
N+C ATVI+VDS N++GILL+V+Q+L D+NL I KAYISSDGGWFMDVFNV D DG K+
Sbjct: 2 NSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYISSDGGWFMDVFNVTDQDGNKV 61
Query: 82 RDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLH 141
D+ V+DYIQ+ L +A F+ S+RS VGV+P+ + T IE TG DRPGL SE+ AVL L
Sbjct: 62 TDEVVLDYIQKSLGPEACFSTSMRS-VGVIPSTDSTVIELTGCDRPGLLSELSAVLTHLK 120
Query: 142 CNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
C+V+NAEIWTHN RAAAV+ VTD TG I DP+RLS IK LL NVL+G + R+AKT +
Sbjct: 121 CSVLNAEIWTHNTRAAAVMQVTDDLTGCGISDPERLSRIKNLLRNVLKGSNTPREAKTVV 180
Query: 202 SPPGIMNRERRLHQIMFDDRDYE-RVEKAVGRVEDKSSRPQTC 243
S G ++ +RRLHQ+MF+DRDYE R+ ++D+ RP C
Sbjct: 181 S-HGEVHTDRRLHQMMFEDRDYEHRLVDDDSSIQDERQRPDVC 222
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 13/170 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V +DN D +V+ V ++ +L + L D+ V+ + ++G + V
Sbjct: 219 PDVCVDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVR 278
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG ++ + + Q LE A R S G+ +E TDR GL S V
Sbjct: 279 HIDGSPVKSEAEKQRVIQCLEA----AIKRRVSEGL-------KLELCTTDRVGLLSNVT 327
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
+ + V AE+ T +A +V+D S GY+I D K + +I++ +
Sbjct: 328 RIFRENSLTVTRAEVKTKGGKALNTFYVSDAS-GYSI-DAKTIDSIRQTI 375
>gi|226501350|ref|NP_001147811.1| ACR4 [Zea mays]
gi|195613876|gb|ACG28768.1| ACR4 [Zea mays]
Length = 453
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 126/215 (58%), Positives = 155/215 (72%), Gaps = 8/215 (3%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG 64
YAKL+RRMNPPRVVIDN++C +ATVI+VD VNKHGILL+ +QVL D+NLVI KAYISSDG
Sbjct: 16 YAKLVRRMNPPRVVIDNDSCGNATVIRVDRVNKHGILLEAVQVLVDLNLVITKAYISSDG 75
Query: 65 GWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGT 124
WFM VFNV D DG K+ ++EVID+IQ+ LE+D P +P ++ TSIE TG
Sbjct: 76 NWFMHVFNVTDQDGSKLHNREVIDHIQKCLESDGYLVPPANGY--ALPEDQFTSIELTGA 133
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
DRPGL SEVCAVLA L CN+V AE+WTH+ R AAV+ VTD +TG A+ D RLS ++ELL
Sbjct: 134 DRPGLLSEVCAVLATLSCNIVKAEVWTHDGRTAAVIQVTDEATGRAVHDAGRLSRVQELL 193
Query: 185 FNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFD 219
+V+RG T +S ERRLH +M D
Sbjct: 194 RDVMRGDGTCNHGGTGISA------ERRLHTLMLD 222
>gi|218193266|gb|EEC75693.1| hypothetical protein OsI_12504 [Oryza sativa Indica Group]
Length = 453
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 132/244 (54%), Positives = 171/244 (70%), Gaps = 8/244 (3%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEY IR+MNPPR+ IDN++C DAT+++VDS N++GILL+VIQVL D+NLVI KAYI+
Sbjct: 14 DDEYDNFIRKMNPPRIEIDNDSCNDATIVRVDSANEYGILLEVIQVLIDLNLVISKAYIT 73
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVI----DYIQQRLETDASFAPSLRSSVGVMPTEEHT 117
SDGGW MDVFN+ D +G+K++DK I DYI + L D+ + PS R SV V + +H
Sbjct: 74 SDGGWVMDVFNITDKEGQKLKDKATIARIEDYICKSLGADSRYIPSRRRSVDVAASSDHN 133
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
IE TGTDRPGL SEV AVLA L CNVV+AEIWTHN RAAAV+ VTD TG A+ D RL
Sbjct: 134 VIELTGTDRPGLLSEVSAVLASLKCNVVSAEIWTHNTRAAAVMRVTDEGTGSAVTDADRL 193
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGI-MNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
I++ L +LRG + R ++S + ERRLHQ+M DD D+E++ + ++
Sbjct: 194 ERIRDRLSYLLRGGNLSRGTAMAVSTGTCSTHTERRLHQMMLDDGDHEQLHR---HPPNQ 250
Query: 237 SSRP 240
S RP
Sbjct: 251 SQRP 254
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 77/189 (40%), Gaps = 18/189 (9%)
Query: 1 MDDEYAKLIRRMNP-----PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVI 55
+DD + + R P P V + N D +V+ + ++ +L + L D++ V+
Sbjct: 235 LDDGDHEQLHRHPPNQSQRPNVTVSNWNDKDYSVVTIRCKDRPKLLFDTVCTLTDLHYVV 294
Query: 56 KKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE 115
A I + F V +G + + + Q LE A R S GV
Sbjct: 295 FHANIDAKDNQAYQEFYVRHVNGSPMHTEADRLRVIQCLEA----AIERRVSEGV----- 345
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
+E D+ GL SEV + + V AE+ T A +V D STG + D K
Sbjct: 346 --KLELCTNDKVGLLSEVTRIFRENSLTVTRAEVSTRGRMAVNTFYVRD-STGGTV-DQK 401
Query: 176 RLSTIKELL 184
+ +I++ +
Sbjct: 402 TIDSIRQAI 410
>gi|294460934|gb|ADE76039.1| unknown [Picea sitchensis]
Length = 454
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 127/229 (55%), Positives = 164/229 (71%), Gaps = 6/229 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D ++ L +R++PP V IDN+TC D +++KV+S N+HGILL+V+QVL D++L+I KAYI
Sbjct: 9 FDPDFESLNQRIHPPMVCIDNDTCEDCSLVKVESANRHGILLEVVQVLTDLDLIISKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPS-----LRSSVGVMPTEE 115
SSDG WFMDVF+V D G K+ D+ +IDYIQQ L + + L +VGV E
Sbjct: 69 SSDGRWFMDVFHVTDQLGNKLTDQRIIDYIQQALGAKQGGSTTEVKTCLGRTVGVQSIGE 128
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
HT+IE TGTDRPGL SE+ AVL +L CNVV AE+WTHN R A VV+VTD ST I++P+
Sbjct: 129 HTAIELTGTDRPGLLSEISAVLTNLKCNVVAAEVWTHNMRVACVVYVTDESTSRPIEEPE 188
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
+L+ IKE L NVL+G DD R KT S G+ + ERRLHQ+MF DRDYE
Sbjct: 189 QLAAIKEQLSNVLKGNDDRRGVKTDFS-MGLTHTERRLHQMMFADRDYE 236
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 25/159 (15%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV- 73
P + I+N +V+ V ++ +L + L D+ V+ A I+S G + + + +
Sbjct: 249 PIIKIENCNEKGYSVVTVHCKDRPKLLFDTVCTLTDMQYVVLHATITSSGTYALQEYYIR 308
Query: 74 ------IDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 127
+D +G+K R VI ++ +E S E +E +DR
Sbjct: 309 HMDGCTLDTEGEKQR---VIKCLEAAIERRVS---------------EGVRLELCTSDRV 350
Query: 128 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
GL S++ + + +V A++ T D+A V +VTD S
Sbjct: 351 GLLSDITRIFRENGLSVTRADVTTRADKAVNVFYVTDTS 389
>gi|116781547|gb|ABK22147.1| unknown [Picea sitchensis]
Length = 466
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 131/229 (57%), Positives = 157/229 (68%), Gaps = 5/229 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY L RR+NPP V IDN+TC D T+IKVDS NKHGILL+V+Q+L D++L I KAYI
Sbjct: 9 FDPEYENLERRINPPSVSIDNDTCPDCTLIKVDSANKHGILLEVVQLLTDLDLTISKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ-----RLETDASFAPSLRSSVGVMPTEE 115
SSDGGWFMDVF+V D G K+ D+ +I+YIQQ R+ + L VGV E
Sbjct: 69 SSDGGWFMDVFHVTDQLGDKLTDESIIEYIQQSLGAKRVISSREVKTCLGRIVGVQSIGE 128
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
+T+IE TGTDRPGL SE+ AVL CNVV AE WTHN R A VV+VTD S+ I+D
Sbjct: 129 YTAIELTGTDRPGLLSEISAVLTSFSCNVVAAESWTHNMRVACVVYVTDESSNRPIEDEV 188
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
RLSTIK L NVL+G DD K + G+ +RERRLHQ+MF DRDYE
Sbjct: 189 RLSTIKGQLSNVLKGNDDSTKGVKTDFSMGLTHRERRLHQLMFADRDYE 237
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 71/154 (46%), Gaps = 11/154 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P + ++N +V+ + ++ +L + L D+ V+ A I+ + + + + +
Sbjct: 254 PVITVENCNEKGYSVVNIQCRDRPKLLFDTVCTLTDMQYVVFHASITCNLPYALQEYYIR 313
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG + + + + LE A R+S G+ S+E + +DR GL S+V
Sbjct: 314 HMDGCTLDTEGEKHRVIKCLEA----AIGRRASEGL-------SLELSASDRIGLLSDVT 362
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ + +V A++ T D+A V +V D S+G
Sbjct: 363 RMFRENGLSVTRADVTTRGDKAINVFYVRDASSG 396
>gi|449468820|ref|XP_004152119.1| PREDICTED: uncharacterized protein LOC101215960 [Cucumis sativus]
Length = 449
Score = 253 bits (645), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 128/222 (57%), Positives = 161/222 (72%), Gaps = 1/222 (0%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMNPPRV IDN + AT+IKVDS N+HG LL+V+QVL D+NL+I++AYISS
Sbjct: 11 DEYQKLVIRMNPPRVSIDNTSSRKATLIKVDSSNRHGSLLEVVQVLTDLNLIIRRAYISS 70
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D +GKK+ D V + IQQ L A SLR SVGV EHT+IE +
Sbjct: 71 DGEWFMDVFHVTDQNGKKLCDDGVGERIQQSLGPRARSFRSLRRSVGVQAAAEHTTIELS 130
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
G DRPGL SEV AVL DL CNVV AE+WTHN R A+VV++TD ++G I DP L+ IK+
Sbjct: 131 GRDRPGLLSEVFAVLTDLKCNVVAAEVWTHNSRMASVVYITDDTSGMPIDDPDWLAKIKQ 190
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
LL VL+G D A T++S ++ERRLHQ+M+ DRD++
Sbjct: 191 LLLYVLKGDRDKHSANTAVSMNS-THKERRLHQMMYADRDFD 231
Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 81/190 (42%), Gaps = 15/190 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ++N TV+ + ++ +L + L D+ V+ A I ++ + +
Sbjct: 245 PLVTVENCVEKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHATIIAEEPEAYQEYFIR 304
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG I + + LE A R++ G+ +E DR GL ++V
Sbjct: 305 HVDGSPISSEAERQRVIHCLEA----AIRRRTTEGI-------KLELCSEDRVGLLTDVT 353
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDF 194
+ + +V AE+ T +A V +VTD ++G +++ + + + +L DD
Sbjct: 354 RIFRENGLSVTRAEVTTRGTQAVNVFYVTD-ASGNSVRSETIKAVREAIGLTILHVKDDE 412
Query: 195 RKAKTSLSPP 204
+++K PP
Sbjct: 413 QQSKC---PP 419
>gi|357502937|ref|XP_003621757.1| hypothetical protein MTR_7g022470 [Medicago truncatula]
gi|355496772|gb|AES77975.1| hypothetical protein MTR_7g022470 [Medicago truncatula]
Length = 451
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 128/224 (57%), Positives = 164/224 (73%), Gaps = 1/224 (0%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+DDE+ KL+ RMNPPRV +DN + T+IKVDS NK G LL+V+QVL D+NL++++AYI
Sbjct: 10 LDDEFEKLVIRMNPPRVTVDNTSSRTTTLIKVDSANKRGSLLEVVQVLTDMNLIVRRAYI 69
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVF+V D +GKKI ++V D IQQ L S+R SVGV EHT+IE
Sbjct: 70 SSDGGWFMDVFHVTDQNGKKILQEDVADRIQQSLGPRVRSFRSVRRSVGVQAAAEHTTIE 129
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SEV A+LADL CNVV AE+WTHN R A+VV++TD +TG I +P RL+ I
Sbjct: 130 LTGRDRPGLLSEVFAILADLKCNVVAAEVWTHNSRMASVVYITDDTTGLPIDNPDRLAKI 189
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
K LL VLRG D + A T++S +++RRLHQ+M+ DRDY+
Sbjct: 190 KHLLLYVLRGDIDKKNANTAVSFCS-THKDRRLHQLMYADRDYD 232
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 12/192 (6%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
D +Y+ N V +D+ TV+ + ++ +L + + D+ V+ ++
Sbjct: 235 DGDYSCSTNDRNKLNVTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTITDMQYVVYHGTVN 294
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEF 121
++G + + DG I + +QR+ A R+S GV +E
Sbjct: 295 AEGPEAYQEYYIRHVDGYPISSEAE----RQRVIHCLEAAVRRRTSEGV-------KLEL 343
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
+G DR GL S+V + + +V AE+ T +A V +VTD S G +K + K
Sbjct: 344 SGEDRVGLLSDVTRIFRENGLSVCRAEVTTRGSQAMNVFYVTDVS-GNPVKSETIEAVRK 402
Query: 182 ELLFNVLRGYDD 193
E+ +LR DD
Sbjct: 403 EIGLTILRVKDD 414
>gi|356568931|ref|XP_003552661.1| PREDICTED: uncharacterized protein LOC100816426 [Glycine max]
Length = 450
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 127/218 (58%), Positives = 159/218 (72%), Gaps = 1/218 (0%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+ DE+ KL+ RMNPPRV +DN + TVIKVDS NK G LL+V+QVL D+NL +++AYI
Sbjct: 10 LHDEFEKLVIRMNPPRVAVDNISSGTDTVIKVDSANKRGSLLEVVQVLTDMNLSVRRAYI 69
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDG WFMDVF+V D +GKK +V D IQQ L AS SLR SVGV EHT+IE
Sbjct: 70 SSDGEWFMDVFHVTDQNGKKFMQDDVADRIQQSLGPRASSFRSLRRSVGVQAEAEHTTIE 129
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SEV AVLADL CNVV AE+WTHN R A+VV++TD +TG +I DP RL+ I
Sbjct: 130 LTGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDEATGLSIDDPDRLAKI 189
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMF 218
K+LL VL+G D + A T++S G +++RRLHQ+M+
Sbjct: 190 KQLLLYVLKGDIDKKSANTAVS-VGSTHKDRRLHQLMY 226
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 74/177 (41%), Gaps = 12/177 (6%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDC 76
V +D+ TV+ + ++ +L + L D+ V+ + ++G + +
Sbjct: 249 VTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHGTVIAEGPEAYQEYYIRHV 308
Query: 77 DGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAV 136
DG I + + LE A R+S G+ +E G DR GL S+V +
Sbjct: 309 DGSPISSEAERQRVIHCLEA----AVRRRTSEGI-------KLELCGEDRVGLLSDVTRI 357
Query: 137 LADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDD 193
+ +V AE+ T +A V +VTD S G +K + KE+ +L DD
Sbjct: 358 FRENGLSVNRAEVTTRGSQAMNVFYVTDVS-GNPVKSETIETVRKEIGLTILHVKDD 413
>gi|217073154|gb|ACJ84936.1| unknown [Medicago truncatula]
Length = 387
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 128/224 (57%), Positives = 164/224 (73%), Gaps = 1/224 (0%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+DDE+ KL+ RMNPPRV +DN + T+IKVDS NK G LL+V+QVL D+NL++++AYI
Sbjct: 10 LDDEFEKLVIRMNPPRVTVDNTSSRTTTLIKVDSANKRGSLLEVVQVLTDMNLIVRRAYI 69
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVF+V D +GKKI ++V D IQQ L S+R SVGV EHT+IE
Sbjct: 70 SSDGGWFMDVFHVTDQNGKKILQEDVADRIQQSLGPRVRSFRSVRRSVGVQAAAEHTTIE 129
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SEV A+LADL CNVV AE+WTHN R A+VV++TD +TG I +P RL+ I
Sbjct: 130 LTGRDRPGLLSEVFAILADLKCNVVAAEVWTHNSRMASVVYITDDTTGLPIDNPDRLTKI 189
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
K LL VLRG D + A T++S +++RRLHQ+M+ DRDY+
Sbjct: 190 KHLLLYVLRGDIDKKNANTAVSFCS-THKDRRLHQLMYADRDYD 232
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 70/163 (42%), Gaps = 11/163 (6%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
D +Y+ N V +D+ TV+ + ++ +L + + D+ V+ ++
Sbjct: 235 DGDYSCSTNDRNKLNVTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTITDMQYVVYHGTVN 294
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEF 121
++G + + DG I + +QR+ A R+S GV +E
Sbjct: 295 AEGPEAYQEYYIRHVDGYPISSEAE----RQRVIHCLEAAVRRRTSEGV-------KLEL 343
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+G DR GL S+V + + +V AE+ T +A V +VTD
Sbjct: 344 SGEDRVGLLSDVTRIFRENGLSVCRAEVTTRGSQAMNVFYVTD 386
>gi|449484676|ref|XP_004156949.1| PREDICTED: uncharacterized LOC101215960 [Cucumis sativus]
Length = 449
Score = 250 bits (639), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 127/222 (57%), Positives = 160/222 (72%), Gaps = 1/222 (0%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMNPPRV IDN + AT+IKVDS N+HG LL+V+QVL D+NL+I++AYISS
Sbjct: 11 DEYQKLVIRMNPPRVSIDNTSSRKATLIKVDSSNRHGSLLEVVQVLTDLNLIIRRAYISS 70
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDV +V D +GKK+ D V + IQQ L A SLR SVGV EHT+IE +
Sbjct: 71 DGEWFMDVLHVTDQNGKKLCDDGVGERIQQSLGPRARSFRSLRRSVGVQAAAEHTTIELS 130
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
G DRPGL SEV AVL DL CNVV AE+WTHN R A+VV++TD ++G I DP L+ IK+
Sbjct: 131 GRDRPGLLSEVFAVLTDLKCNVVAAEVWTHNSRMASVVYITDDTSGMPIDDPDWLAKIKQ 190
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
LL VL+G D A T++S ++ERRLHQ+M+ DRD++
Sbjct: 191 LLLYVLKGDRDKHSANTAVSMNS-THKERRLHQMMYADRDFD 231
Score = 40.4 bits (93), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 81/190 (42%), Gaps = 15/190 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ++N TV+ + ++ +L + L D+ V+ A I ++ + +
Sbjct: 245 PLVTVENCVEKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHATIIAEEPEAYQEYFIR 304
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG I + + LE A R++ G+ +E DR GL ++V
Sbjct: 305 HVDGSPISSEAERQRVIHCLEA----AIRRRTTEGI-------KLELCSEDRVGLLTDVT 353
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDF 194
+ + +V AE+ T +A V +VTD ++G +++ + + + +L DD
Sbjct: 354 RIFRENGLSVTRAEVTTRGTQAVNVFYVTD-ASGNSVRSETIKAVREAIGLTILHVKDDE 412
Query: 195 RKAKTSLSPP 204
+++K PP
Sbjct: 413 QQSKC---PP 419
>gi|125590195|gb|EAZ30545.1| hypothetical protein OsJ_14593 [Oryza sativa Japonica Group]
Length = 397
Score = 246 bits (629), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 118/190 (62%), Positives = 144/190 (75%), Gaps = 1/190 (0%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEYAKL+R MNPPRVV+DN C +ATVI+VDSV+ HG LL V+QV+ D+ LVI+KAY S
Sbjct: 15 DDEYAKLVRGMNPPRVVVDNEACDEATVIRVDSVSSHGTLLAVVQVIADLGLVIRKAYFS 74
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEF 121
SDG WFMDVFNV D DG K+ D + I YIQ LE D + P +R++VG++P EE+T IE
Sbjct: 75 SDGSWFMDVFNVTDRDGNKVLDDQTISYIQTTLEADDWYYPEVRNTVGIVPAEEYTVIEL 134
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT-DHSTGYAIKDPKRLSTI 180
TGTDRPGL SEVCAVLA + C V +AE+WTHN R AAVVHVT D +G AI+D R++ I
Sbjct: 135 TGTDRPGLLSEVCAVLAGMRCAVRSAELWTHNTRVAAVVHVTDDGGSGGAIEDEARIADI 194
Query: 181 KELLFNVLRG 190
L N+LRG
Sbjct: 195 STRLGNLLRG 204
>gi|224082380|ref|XP_002306671.1| predicted protein [Populus trichocarpa]
gi|222856120|gb|EEE93667.1| predicted protein [Populus trichocarpa]
Length = 445
Score = 246 bits (628), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 127/227 (55%), Positives = 162/227 (71%), Gaps = 4/227 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY L R+NPPRV +DN +C+D+T+IKVDS+NK GILL+V+Q+L D++L+I KAYI
Sbjct: 9 FDPEYENLSTRINPPRVSVDNTSCSDSTLIKVDSMNKPGILLEVVQILTDLDLIITKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSS--VGVMPTEEHTS 118
SSDGGWFMDVF+V D GKKI D + IDYI++ L + S VGV +HT+
Sbjct: 69 SSDGGWFMDVFHVTDQQGKKIADLKTIDYIEKALGPKGQEEVTTWSGKPVGVHSVGDHTA 128
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
IE TG DRPGL SE+ AVLA+LH NVV AE+WTHN R A VV+V D +T A+ DP RLS
Sbjct: 129 IELTGRDRPGLLSEISAVLANLHFNVVAAEVWTHNRRIACVVYVNDDTTSRAVDDPTRLS 188
Query: 179 TIKELLFNVLRGYDDFRK-AKTSLSPPGIMNRERRLHQIMFDDRDYE 224
+++ L N+LRG DD K +TS S G + +RRLHQ++F DRDYE
Sbjct: 189 AMEDQLKNILRGCDDDEKEGRTSFS-MGFTHVDRRLHQMLFADRDYE 234
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P++ +++ +V+ V ++ ++ ++ L D+ V+ A ISSD + +
Sbjct: 250 PKITVEHCEEKGYSVVTVRCKDRAKLMFDIVCTLTDMQYVVFHATISSDAPHASQEYYIR 309
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG + + D + + LE ++R V E S+E DR GL SEV
Sbjct: 310 HMDGCVLDTEGEKDRVIKCLEA------AIRRRVS-----EGLSLELCAKDRVGLLSEVT 358
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
+L + +V A + T ++A V +V D S
Sbjct: 359 RILRENGLSVSRAGVMTIGEQAMNVFYVRDAS 390
>gi|302142726|emb|CBI19929.3| unnamed protein product [Vitis vinifera]
Length = 466
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 127/229 (55%), Positives = 162/229 (70%), Gaps = 6/229 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY L R+NPPRV +DN +C+D T+IKVDS+NK GILL+V+Q+L D++L+I KAYI
Sbjct: 28 FDPEYENLSMRINPPRVSVDNLSCSDCTLIKVDSMNKPGILLEVVQILTDIDLLITKAYI 87
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPTEEH 116
SSDGGWFMDVF+V D G KI D ++IDYI++ L +++ VGV +H
Sbjct: 88 SSDGGWFMDVFHVTDQQGNKITDGKIIDYIEKALGPKGDTIDGVKTWPGKRVGVHSVGDH 147
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T+IE G DRPGL SE+ AVLADLH NVV AE+WTHN R A VV+V D +T A+ DP R
Sbjct: 148 TAIELIGKDRPGLLSEISAVLADLHFNVVGAEVWTHNRRIACVVYVNDDATCRAVDDPTR 207
Query: 177 LSTIKELLFNVLRGY-DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
LS ++E L NVLRG DD + A+TS S G + +RRLHQ++F DRDYE
Sbjct: 208 LSVMEEQLKNVLRGCEDDDKVARTSFS-MGFTHVDRRLHQMLFADRDYE 255
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 16/169 (9%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P++ ID + + V ++ ++ ++ L D+ V+ A ISSDG + + +
Sbjct: 271 PKITIDRCEDKGYSAVSVMCKDRPKLMFDIVCTLTDMQYVVFHASISSDGPYASQEYFIR 330
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG + ++ + + + LE ++R V E S+E DR GL SEV
Sbjct: 331 HMDGCTLDNEGEKERVIKCLEA------AIRRRV-----SEGLSLELCAKDRVGLLSEVT 379
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 183
VL + +V A + T ++A V +V D S P + TI+ L
Sbjct: 380 RVLREHGLSVTRAGVSTVGEQAMNVFYVRDAS-----GKPVDMKTIEAL 423
>gi|359492290|ref|XP_003634395.1| PREDICTED: uncharacterized protein LOC100250578 isoform 2 [Vitis
vinifera]
Length = 465
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 127/229 (55%), Positives = 162/229 (70%), Gaps = 6/229 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY L R+NPPRV +DN +C+D T+IKVDS+NK GILL+V+Q+L D++L+I KAYI
Sbjct: 27 FDPEYENLSMRINPPRVSVDNLSCSDCTLIKVDSMNKPGILLEVVQILTDIDLLITKAYI 86
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPTEEH 116
SSDGGWFMDVF+V D G KI D ++IDYI++ L +++ VGV +H
Sbjct: 87 SSDGGWFMDVFHVTDQQGNKITDGKIIDYIEKALGPKGDTIDGVKTWPGKRVGVHSVGDH 146
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T+IE G DRPGL SE+ AVLADLH NVV AE+WTHN R A VV+V D +T A+ DP R
Sbjct: 147 TAIELIGKDRPGLLSEISAVLADLHFNVVGAEVWTHNRRIACVVYVNDDATCRAVDDPTR 206
Query: 177 LSTIKELLFNVLRGY-DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
LS ++E L NVLRG DD + A+TS S G + +RRLHQ++F DRDYE
Sbjct: 207 LSVMEEQLKNVLRGCEDDDKVARTSFS-MGFTHVDRRLHQMLFADRDYE 254
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 16/169 (9%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P++ ID + + V ++ ++ ++ L D+ V+ A ISSDG + + +
Sbjct: 270 PKITIDRCEDKGYSAVSVMCKDRPKLMFDIVCTLTDMQYVVFHASISSDGPYASQEYFIR 329
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG + ++ + + + LE ++R V E S+E DR GL SEV
Sbjct: 330 HMDGCTLDNEGEKERVIKCLEA------AIRRRV-----SEGLSLELCAKDRVGLLSEVT 378
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 183
VL + +V A + T ++A V +V D S P + TI+ L
Sbjct: 379 RVLREHGLSVTRAGVSTVGEQAMNVFYVRDAS-----GKPVDMKTIEAL 422
>gi|225457853|ref|XP_002268570.1| PREDICTED: uncharacterized protein LOC100250578 isoform 1 [Vitis
vinifera]
gi|147789965|emb|CAN73861.1| hypothetical protein VITISV_007291 [Vitis vinifera]
Length = 447
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 127/229 (55%), Positives = 162/229 (70%), Gaps = 6/229 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY L R+NPPRV +DN +C+D T+IKVDS+NK GILL+V+Q+L D++L+I KAYI
Sbjct: 9 FDPEYENLSMRINPPRVSVDNLSCSDCTLIKVDSMNKPGILLEVVQILTDIDLLITKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPTEEH 116
SSDGGWFMDVF+V D G KI D ++IDYI++ L +++ VGV +H
Sbjct: 69 SSDGGWFMDVFHVTDQQGNKITDGKIIDYIEKALGPKGDTIDGVKTWPGKRVGVHSVGDH 128
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T+IE G DRPGL SE+ AVLADLH NVV AE+WTHN R A VV+V D +T A+ DP R
Sbjct: 129 TAIELIGKDRPGLLSEISAVLADLHFNVVGAEVWTHNRRIACVVYVNDDATCRAVDDPTR 188
Query: 177 LSTIKELLFNVLRGY-DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
LS ++E L NVLRG DD + A+TS S G + +RRLHQ++F DRDYE
Sbjct: 189 LSVMEEQLKNVLRGCEDDDKVARTSFS-MGFTHVDRRLHQMLFADRDYE 236
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 16/169 (9%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P++ ID + + V ++ ++ ++ L D+ V+ A ISSDG + + +
Sbjct: 252 PKITIDRCEDKGYSAVSVMCKDRPKLMFDIVCTLTDMQYVVFHASISSDGPYASQEYFIR 311
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG + ++ + + + LE ++R V E S+E DR GL SEV
Sbjct: 312 HMDGCTLDNEGEKERVIKCLEA------AIRRRV-----SEGLSLELCAKDRVGLLSEVT 360
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 183
VL + +V A + T ++A V +V D S P + TI+ L
Sbjct: 361 RVLREHGLSVTRAGVSTVGEQAMNVFYVRDAS-----GKPVDMKTIEAL 404
>gi|414871684|tpg|DAA50241.1| TPA: hypothetical protein ZEAMMB73_737306 [Zea mays]
Length = 442
Score = 243 bits (621), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 128/241 (53%), Positives = 168/241 (69%), Gaps = 12/241 (4%)
Query: 4 EYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD 63
++ +LI R R+VIDN + A+AT+++VDS N++GILL+VIQV+ D+NLVI KAYI+SD
Sbjct: 12 QFWRLIGR----RIVIDNESSAEATIVRVDSANEYGILLEVIQVMIDLNLVIGKAYITSD 67
Query: 64 GGWFMDVFNVIDCDGKKIRDK----EVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSI 119
GGWFMDVFNV D +GKKI+D+ ++ DYI++ L D+ + PS R SV V +H I
Sbjct: 68 GGWFMDVFNVTDKEGKKIKDEATLTQIEDYIRKSLGADSRYIPSRRRSVDVAAAADHNII 127
Query: 120 EFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLST 179
E TGTDRPGL SEV AVL L CNVV+AEIWTHN RAAAV+ VTD TG A+ D +RL
Sbjct: 128 ELTGTDRPGLLSEVSAVLTSLKCNVVSAEIWTHNTRAAAVMRVTDEDTGLAVTDAERLER 187
Query: 180 IKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSR 239
I+E L + RG + R A S S + ERRLHQ+M DD DYE++++ + +S R
Sbjct: 188 IREKLSYLFRGGNLSRGATVS-SRTATTHTERRLHQMMLDDGDYEQLQR---QAPGQSQR 243
Query: 240 P 240
P
Sbjct: 244 P 244
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 83/213 (38%), Gaps = 24/213 (11%)
Query: 2 DDEYAKLIRRM----NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKK 57
D +Y +L R+ P V + N D +V+ + ++ +L + L D+ V+
Sbjct: 227 DGDYEQLQRQAPGQSQRPNVTVRNWNDKDYSVVTIRCKDRSKLLFDTVCTLTDLQYVVFH 286
Query: 58 AYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHT 117
A I + F V +G + + + Q LE A R S GV
Sbjct: 287 ANIDAKDNQAYQEFYVRHVNGSPMNTETERLRVIQCLEA----AIERRVSEGV------- 335
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
+E D+ GL SEV + + V AE+ T A +V S G A+ D K +
Sbjct: 336 KLELCTNDKVGLLSEVTRIFRENSLTVTRAEVTTRGRMAVNTFYVRG-SAGEAV-DQKAI 393
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE 210
+I+E + + L + K PP +E
Sbjct: 394 DSIREAIGHSL-------QVKGQAEPPEPQKKE 419
>gi|224053525|ref|XP_002297856.1| predicted protein [Populus trichocarpa]
gi|118487724|gb|ABK95686.1| unknown [Populus trichocarpa]
gi|222845114|gb|EEE82661.1| predicted protein [Populus trichocarpa]
Length = 448
Score = 243 bits (619), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 121/216 (56%), Positives = 154/216 (71%), Gaps = 1/216 (0%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDE+ KL+ RMNPPRV +DN + AT+IKVDS NK G LL+V+QVL D+NL+I++AYIS
Sbjct: 10 DDEFEKLVIRMNPPRVTVDNASSRKATLIKVDSANKRGSLLEVVQVLTDLNLIIRRAYIS 69
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEF 121
SDG WFMDVF V D G K+ + +V + IQQ L SLR SVGV E+T+IE
Sbjct: 70 SDGEWFMDVFYVTDQHGNKLSEDDVAERIQQSLGPRGRSFRSLRRSVGVQAAAENTTIEL 129
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
TG DRPGL SE+ A+L DL CNVV +E+WTHN R A+VV++TD +TG I DP RL+ IK
Sbjct: 130 TGRDRPGLLSEIFAILTDLKCNVVASEVWTHNSRMASVVYITDEATGLPIDDPDRLTKIK 189
Query: 182 ELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIM 217
+LL VL+G D R A T++S ++ERRLHQ+M
Sbjct: 190 QLLLYVLKGDRDKRSANTAVSVDS-THKERRLHQMM 224
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 16/190 (8%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ++N T++ + ++ +L + L D+ V+ I ++G + +
Sbjct: 245 PFVTLENCVDKGYTIVNLRCPDRPKLLFDTVCTLTDMQYVVYHGTIIAEGPEACQEYFIR 304
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG + + +QR+ A R+S GV +E DR GL S+V
Sbjct: 305 HMDGSPVSSEAE----RQRVINCLEAAIRRRTSEGV-------RLELCSEDRVGLLSDVT 353
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDF 194
+ + +V AE+ T +A V +VTD S+GY +K+ + KE+ +L DD
Sbjct: 354 RIFRENGLSVTRAEVTTRGSQAVNVFYVTD-SSGYPVKNETIEAVRKEIGLTILHVNDDA 412
Query: 195 RKAKTSLSPP 204
S SPP
Sbjct: 413 H----SKSPP 418
>gi|224075527|ref|XP_002304667.1| predicted protein [Populus trichocarpa]
gi|222842099|gb|EEE79646.1| predicted protein [Populus trichocarpa]
Length = 448
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 123/217 (56%), Positives = 155/217 (71%), Gaps = 1/217 (0%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MDDE+ KL+ RMNPPRV +DN + AT+I+VDS NK G LL+V+QVL D+NL+I++AYI
Sbjct: 9 MDDEFEKLVIRMNPPRVTVDNASSRTATLIEVDSANKRGSLLEVVQVLTDLNLLIRRAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDG WFMDVF+V D G K+ + +V + IQQ L SLR SV V EHT+IE
Sbjct: 69 SSDGEWFMDVFHVTDQHGNKLSEDDVAERIQQSLGPRGPSFRSLRRSVDVQGAAEHTTIE 128
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
TG DRPGL SE+ AVLA L CNVV +EIWTHN R A+VV++TD +TG I DP RL+ I
Sbjct: 129 LTGRDRPGLLSEIFAVLAGLKCNVVASEIWTHNSRMASVVYITDEATGLPIDDPDRLTKI 188
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIM 217
K+LL +L G D R A T++S G ++ERRLHQ+M
Sbjct: 189 KQLLLCILIGDRDKRSANTAVS-VGSTHKERRLHQMM 224
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 80/188 (42%), Gaps = 16/188 (8%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDC 76
V ++N TV+ + ++ ++ + L D+ V+ A I ++G + +
Sbjct: 247 VTVENCVDKGYTVVNLRCPDRPKLIFDTVCTLTDMQYVVYHAIIIAEGPEACQEYFIRHM 306
Query: 77 DGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAV 136
DG I + +QRL A R+S GV +E DR GL S+V +
Sbjct: 307 DGSPINSEAE----RQRLINCLEAAIRRRTSEGV-------RLELCSEDRVGLLSDVTRI 355
Query: 137 LADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRK 196
+ +V AE+ T +A V VTD S+G+ +K + KE+ +L DD
Sbjct: 356 FRENGLSVTRAEVTTRGSQAVNVFFVTD-SSGHPVKSETIEAVRKEIGLTILNVNDD--- 411
Query: 197 AKTSLSPP 204
S SPP
Sbjct: 412 -AYSKSPP 418
>gi|224066763|ref|XP_002302203.1| predicted protein [Populus trichocarpa]
gi|222843929|gb|EEE81476.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 122/226 (53%), Positives = 158/226 (69%), Gaps = 3/226 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY L R+NPPRV +DN +C D+T++KVDS+NK GILL+V+QVL D++L+I KAYI
Sbjct: 9 FDPEYENLSTRINPPRVSVDNTSCNDSTLVKVDSMNKPGILLEVVQVLTDLDLIITKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL--ETDASFAPSLRSSVGVMPTEEHTS 118
SSDGGWFMDVF+V D GKKI D + IDYI++ L ++ VGV HT+
Sbjct: 69 SSDGGWFMDVFHVTDQQGKKITDIKTIDYIEKALGPKSQEEVTTWADKRVGVHSVGGHTA 128
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
IE G DRPGL SE+ AVLA+LH NVV AE+WTHN R A VV+V D +T A+ DP RLS
Sbjct: 129 IELIGKDRPGLLSEISAVLANLHFNVVAAEVWTHNSRIACVVYVNDDTTSRAVADPTRLS 188
Query: 179 TIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
+++ L N+LRG ++ +TS S G + +RRLHQ++F DRDYE
Sbjct: 189 IMEDQLKNILRGCENDEAGRTSFS-MGFTHVDRRLHQMLFADRDYE 233
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 11/152 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P++ ++ +V+ V ++ ++ ++ L D+ V+ A ISSDG + +
Sbjct: 249 PKITVERCEDKGYSVVTVRCKDRAKLMFDIVCTLTDMQYVVFHATISSDGPHASQEYYIR 308
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG V+D ++ ++R V E S+E DR GL SEV
Sbjct: 309 HMDGC------VLDTEGEKERVIKCLEAAIRRRV-----SEGLSLELCAKDRVGLLSEVT 357
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
+L + V A + T ++A V +V D S
Sbjct: 358 RILRENGLAVSRAGVMTIGEQATNVFYVRDAS 389
>gi|449459664|ref|XP_004147566.1| PREDICTED: uncharacterized protein LOC101209959 [Cucumis sativus]
gi|449520363|ref|XP_004167203.1| PREDICTED: uncharacterized LOC101209959 [Cucumis sativus]
Length = 448
Score = 241 bits (614), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 122/223 (54%), Positives = 159/223 (71%), Gaps = 9/223 (4%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY+KLI RMN PRVVIDN C AT++KVDS +HGILL+ +QVL D+NL I+KAYISS
Sbjct: 15 DEYSKLINRMNTPRVVIDNAVCETATLVKVDSARRHGILLEAVQVLTDLNLSIQKAYISS 74
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D +G K+ D+ VI Y++Q L T P+ + + T++E T
Sbjct: 75 DGIWFMDVFHVTDLEGNKLTDEGVISYLEQSLATIHCGKPA--------TSNDLTALELT 126
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SEV AVLA+L C+VV A++WTHN R A++++V D ++G IK+ +R+ TI
Sbjct: 127 GTDRVGLLSEVFAVLAELQCDVVEAKVWTHNGRIASLIYVKDCNSGSPIKESERIDTIVG 186
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYER 225
L NVL+G DD AKTS+S + + ERRLHQ+MF DRDYER
Sbjct: 187 RLRNVLKGDDDILYAKTSVSMT-VTHTERRLHQMMFADRDYER 228
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 73/174 (41%), Gaps = 21/174 (12%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
+ P V + N +V+ + ++ +L VI + D++ V+ I++ F
Sbjct: 237 DSPVVTVQNLVERGYSVVNIQCKDRMKLLFDVICTMTDMDYVVFHGTITTSRHRAYLEFY 296
Query: 73 VIDCDGKKIRD----KEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPG 128
+ DG I + VI +Q +E R+S GV +E TDRP
Sbjct: 297 IRHTDGTPISSEAERQRVIQCLQASIER--------RTSRGV-------RLELCTTDRPC 341
Query: 129 LFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
L ++V + NV AE+ T + A + +VTD A D K + +++E
Sbjct: 342 LLADVTRTFRENGLNVTRAEVSTSQEVALNLFYVTDGHGSAA--DTKMIDSVRE 393
>gi|224074729|ref|XP_002304443.1| predicted protein [Populus trichocarpa]
gi|222841875|gb|EEE79422.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 126/223 (56%), Positives = 158/223 (70%), Gaps = 9/223 (4%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RM PRVVIDN C ATV+KVDS KHGILL+ +QVL D+NL IKKAYISS
Sbjct: 8 DEYEKLVIRMTTPRVVIDNAVCPKATVVKVDSARKHGILLEAVQVLTDLNLSIKKAYISS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D +G K+ DK VI+YI+Q L T + S G+ T++E T
Sbjct: 68 DGRWFMDVFHVTDLNGNKLTDKSVINYIEQSLVTIHYGRKT--GSNGL------TALELT 119
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SEV AVLADL CNVV+A++WTHN R AA++ V D ++G I+D +++ I+
Sbjct: 120 GTDRVGLLSEVFAVLADLQCNVVDAKVWTHNGRIAALMFVKDCNSGSPIEDTQQIDRIEA 179
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYER 225
L NVL+G +D R AKT +S + + ERRLHQ+MF DRDYER
Sbjct: 180 RLRNVLKGDNDIRSAKTMVS-MAVTHTERRLHQMMFADRDYER 221
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 71/174 (40%), Gaps = 21/174 (12%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
+ P V + N +V+ V ++ +L V+ L D+ ++ A I + G F
Sbjct: 230 DSPVVTVQNWVERGYSVVNVQCRDRTKLLFDVVCTLTDMEYIVFHATIKTSGDRAYLEFY 289
Query: 73 VIDCDGKKIRD----KEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPG 128
+ DG I + VI +Q +E S E +E DR
Sbjct: 290 IRHTDGTPISSEPERQRVIQCLQAAVERRVS---------------EGVRLELCTLDRQC 334
Query: 129 LFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
L ++V + NV AEI T D A V +VTD + G A DPK + ++++
Sbjct: 335 LLADVTRTFRENGLNVTRAEISTTRDMALNVFYVTD-AIGNA-ADPKLIESVRQ 386
>gi|356540171|ref|XP_003538563.1| PREDICTED: Protein-PII uridylyltransferase [Glycine max]
Length = 441
Score = 237 bits (605), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 122/223 (54%), Positives = 165/223 (73%), Gaps = 9/223 (4%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KLI RM+ PRVVIDN+ C+ AT++KVDS +HGILL +QVL D+NL IKKAYIS+
Sbjct: 8 DEYEKLIIRMSTPRVVIDNSVCSSATLVKVDSARRHGILLDAVQVLTDLNLSIKKAYISA 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D +G KI D+ V+ YI+Q L + + + RS+ G+ T++E T
Sbjct: 68 DGKWFMDVFHVTDQNGNKIMDESVLKYIEQSL-GNIHYGRTNRSN-GL------TALELT 119
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
G+DR GL SEV AVLADL C+V +A++WTHN R A++++V D S+G AI+D ++++ I+
Sbjct: 120 GSDRVGLLSEVFAVLADLQCDVADAKVWTHNGRIASLIYVKDCSSGSAIEDSQKINKIEL 179
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYER 225
L NVL+G +D R AK S+S +M+ ERRLHQ+MF DRDYER
Sbjct: 180 RLRNVLKGDNDIRSAKMSVS-MAVMHTERRLHQLMFVDRDYER 221
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 63/150 (42%), Gaps = 11/150 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + N +V+ V ++ +L ++ L D+ V+ A I++ G F +
Sbjct: 232 PLVTVQNWEGRGYSVVNVQCKDRTKLLFDIVCNLTDMEYVVFHATINTSGDRAYLEFYIR 291
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG I + +QR+ A R+S GV +E DR GL +EV
Sbjct: 292 HKDGTPISSEPE----RQRVIQCLKAAVERRASEGV-------RLELCTEDRQGLLAEVM 340
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ NV AEI T + A + +VTD
Sbjct: 341 RTFRENGLNVTRAEISTIGNMATNIFYVTD 370
>gi|18411317|ref|NP_565146.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|30699222|ref|NP_849896.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|30699224|ref|NP_849897.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|79321337|ref|NP_001031289.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|186495930|ref|NP_001117608.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|13430820|gb|AAK26032.1|AF360322_1 unknown protein [Arabidopsis thaliana]
gi|2829923|gb|AAC00631.1| Similar to uridylyl transferases [Arabidopsis thaliana]
gi|21280959|gb|AAM44939.1| unknown protein [Arabidopsis thaliana]
gi|22138096|gb|AAM93428.1| ACR3 [Arabidopsis thaliana]
gi|222424164|dbj|BAH20041.1| AT1G76990 [Arabidopsis thaliana]
gi|332197796|gb|AEE35917.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|332197797|gb|AEE35918.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|332197798|gb|AEE35919.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|332197799|gb|AEE35920.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|332197800|gb|AEE35921.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
Length = 453
Score = 236 bits (603), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 127/234 (54%), Positives = 161/234 (68%), Gaps = 7/234 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY L R+NPP V IDN +C + T++KVDS+NK GILL+V+QVL D++L I KAYI
Sbjct: 9 FDPEYENLSSRINPPSVSIDNTSCKECTLVKVDSMNKPGILLEVVQVLTDLDLTITKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPTEEH 116
SSDGGWFMDVF+V D G K+ D + IDYI++ L + S + VGV +H
Sbjct: 69 SSDGGWFMDVFHVTDQQGNKVTDSKTIDYIEKVLGPKGHASASQNTWPGKRVGVHSLGDH 128
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
TSIE DRPGL SEV AVLADL+ NVV AE WTHN R A V++V D++T A+ DP+R
Sbjct: 129 TSIEIIARDRPGLLSEVSAVLADLNINVVAAEAWTHNRRIACVLYVNDNATSRAVDDPER 188
Query: 177 LSTIKELLFNVLRGYD--DFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEK 228
LS+++E L NVLRG + D + A+TSLS G + +RRLHQ+ F DRDYE V K
Sbjct: 189 LSSMEEQLNNVLRGCEEQDEKFARTSLS-IGSTHVDRRLHQMFFADRDYEAVTK 241
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 16/169 (9%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P++ +++ +VI V ++ ++ ++ L D+ ++ A ISS G + +
Sbjct: 252 PKITVEHCEEKGYSVINVSCEDRPKLMFDIVCTLTDMQYIVFHATISSSGSHASQEYFIR 311
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG + + + + + LE A R S G S+E DR GL SEV
Sbjct: 312 HKDGCTLDTEGEKERVVKCLEA----AIHRRVSEG-------WSLELCAKDRVGLLSEVT 360
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 183
+L + +V A + T ++A V +V D S +P + TI+ L
Sbjct: 361 RILREHGLSVSRAGVTTVGEQAVNVFYVKDAS-----GNPVDVKTIEAL 404
>gi|21593552|gb|AAM65519.1| unknown [Arabidopsis thaliana]
Length = 453
Score = 236 bits (603), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 127/234 (54%), Positives = 161/234 (68%), Gaps = 7/234 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY L R+NPP V IDN +C + T++KVDS+NK GILL+V+QVL D++L I KAYI
Sbjct: 9 FDPEYENLSSRINPPSVSIDNTSCKECTLVKVDSMNKPGILLEVVQVLTDLDLTITKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPTEEH 116
SSDGGWFMDVF+V D G K+ D + IDYI++ L + S + VGV +H
Sbjct: 69 SSDGGWFMDVFHVTDQQGNKVTDSKTIDYIEKVLGPKGHASASQNTWPGKRVGVHSLGDH 128
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
TSIE DRPGL SEV AVLADL+ NVV AE WTHN R A V++V D++T A+ DP+R
Sbjct: 129 TSIEIIARDRPGLLSEVSAVLADLNINVVAAEAWTHNRRIACVLYVNDNATSRAVDDPER 188
Query: 177 LSTIKELLFNVLRGYD--DFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEK 228
LS+++E L NVLRG + D + A+TSLS G + +RRLHQ+ F DRDYE V K
Sbjct: 189 LSSMEEQLNNVLRGCEEQDEKFARTSLS-IGSTHVDRRLHQMFFADRDYEAVTK 241
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 73/176 (41%), Gaps = 30/176 (17%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV- 73
P++ +++ +VI V ++ ++ ++ L D+ ++ A ISS G + +
Sbjct: 252 PKITVEHCEEKGYSVINVSCEDRPKLMFDIVCTLTDMQYIVFHATISSSGSHASQEYFIR 311
Query: 74 ------IDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 127
+D +G+K R + ++ R E S+E DR
Sbjct: 312 HKDGCTLDTEGEKERXVKCLEAAIHR------------------RVSEGWSLELCAKDRV 353
Query: 128 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 183
GL SEV +L + +V A + T ++A V +V D S +P + TI+ L
Sbjct: 354 GLLSEVTRILREHGLSVSRAGVTTVGEQAVNVFYVKDAS-----GNPVDVKTIEAL 404
>gi|255558468|ref|XP_002520259.1| amino acid binding protein, putative [Ricinus communis]
gi|223540478|gb|EEF42045.1| amino acid binding protein, putative [Ricinus communis]
Length = 447
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 118/228 (51%), Positives = 155/228 (67%), Gaps = 4/228 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY L R+NPPRV +DN +C + T+IKVDS+NK GILL+V+Q+L D++ +I KAYI
Sbjct: 9 FDPEYENLSTRINPPRVSVDNTSCNECTLIKVDSMNKPGILLEVVQILTDLDFIITKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPTEEH 116
SSDGGWFMD+F+V D GKKI D + IDYI++ L L++ VGV ++
Sbjct: 69 SSDGGWFMDIFHVTDQQGKKIIDSKTIDYIEKALGPKEYNKDELKTWPGKRVGVHSVGDY 128
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T+IE G DRPGL SE+ AVLA+LH NV AE+WTHN R A VV+V D++T + DP R
Sbjct: 129 TAIELIGRDRPGLLSEITAVLANLHFNVAAAEVWTHNRRIACVVYVNDYTTCRPVDDPTR 188
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
LS ++E L N+LRG +D KA + G + +RRLHQ+ F DRDYE
Sbjct: 189 LSVMEEQLKNILRGCEDDEKASRTSFSMGFTHIDRRLHQMFFADRDYE 236
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 16/169 (9%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P++ ++ +V+ V ++ +L ++ L D+ V+ A ISSDG + + +
Sbjct: 252 PKITVERCGEKGYSVVSVCCKDRAKLLFDIVCTLTDMQYVVFHATISSDGPYASQEYYIR 311
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG + + + + + LE ++R V E S+E DR GL SEV
Sbjct: 312 HMDGCTLDTEGEKERVIKCLEA------AIRRRVC-----EGLSLELCAKDRVGLLSEVT 360
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 183
VL + +V A + T ++A V +V D S +P + TI+ L
Sbjct: 361 RVLRENGLSVTRAGVTTVGEQAMNVFYVRDSS-----GNPVDMKTIEAL 404
>gi|225426651|ref|XP_002281251.1| PREDICTED: uncharacterized protein LOC100242743 [Vitis vinifera]
gi|147794108|emb|CAN62364.1| hypothetical protein VITISV_031924 [Vitis vinifera]
Length = 444
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/223 (54%), Positives = 158/223 (70%), Gaps = 9/223 (4%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMN PRVV+DN CA T++KVDS KHGILL+ +QVL D+NL IKKAYISS
Sbjct: 11 DEYEKLVIRMNTPRVVVDNAVCATTTLVKVDSARKHGILLEAVQVLTDLNLSIKKAYISS 70
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D +G K+ D+ VI+YI+Q L +RS+ T++E T
Sbjct: 71 DGRWFMDVFHVTDLNGNKLTDESVINYIEQSL----GCIHHVRSN----SFNGLTALELT 122
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SEV AVLADL CNVV +++WTHN R A++++V D +G I+D +++ I+
Sbjct: 123 GTDRLGLLSEVFAVLADLECNVVESKMWTHNGRIASLIYVKDCDSGNPIEDSQKIDRIEG 182
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYER 225
L NVL+G +D R AKTS+S + + ERRLHQ+MF DRDYER
Sbjct: 183 RLRNVLKGDNDIRSAKTSVS-LAVTHTERRLHQMMFADRDYER 224
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 22/186 (11%)
Query: 2 DDEYAKLIRRMN-PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D E +IR + P V + N +V+ V ++ +L V+ L D+ V+ A I
Sbjct: 221 DYEREPIIRSASESPAVTVQNWVERGYSVVNVQCKDRRKLLFDVVCTLTDMQYVVFHATI 280
Query: 61 SSDGGWFMDVFNVIDCDGKKIRD----KEVIDYIQQRLETDASFAPSLRSSVGVMPTEEH 116
++ G F + DG I + VI +Q +E AS E
Sbjct: 281 NTAGDKAYLEFYIRHTDGSPISSEAERQRVIQCLQAAIERRAS---------------EG 325
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
+E DR GL ++V + NV AEI T ++ A V +VTD A DPK
Sbjct: 326 VRLELCTEDRRGLLADVTRTFRENGLNVTRAEISTTSEIALNVFYVTDAMGNPA--DPKI 383
Query: 177 LSTIKE 182
+ +++
Sbjct: 384 IEAVRQ 389
>gi|255537131|ref|XP_002509632.1| amino acid binding protein, putative [Ricinus communis]
gi|223549531|gb|EEF51019.1| amino acid binding protein, putative [Ricinus communis]
Length = 442
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 123/228 (53%), Positives = 156/228 (68%), Gaps = 19/228 (8%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RM PRVVIDN C ATV+KVDS KHGILL+ +QVL D+NL IKKAYISS
Sbjct: 8 DEYEKLVIRMTTPRVVIDNGVCPTATVVKVDSARKHGILLEAVQVLTDLNLSIKKAYISS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEH-----T 117
DG WFMDVF+V D +G K+ D+ VI+YI+Q L T + H T
Sbjct: 68 DGRWFMDVFHVTDINGNKLTDESVINYIEQSLGT-------------IHYGRTHDFNGLT 114
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
++E TGTDR GL SEV AVLADL C+VV A++WTHN R A++++V D ++G I+D + +
Sbjct: 115 ALELTGTDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQHI 174
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYER 225
I+ L NVL+G +D R AKTS+S + + ERRLHQ+MF DRDYER
Sbjct: 175 DRIEARLRNVLKGDNDIRSAKTSVS-MAVTHTERRLHQMMFADRDYER 221
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 66/166 (39%), Gaps = 24/166 (14%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
+ P V + N +V+ V ++ +L V+ L D+ V+ A I++ G F
Sbjct: 230 DSPVVTVQNWVERGYSVVNVQCKDRMKLLFDVVCTLTDMEYVVFHATINTAGDKAYLEFY 289
Query: 73 VIDCDGKKIRD----KEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPG 128
+ DG I + VI +Q +E AS E +E DR G
Sbjct: 290 IKHTDGTPISSEPERQRVIQCLQAAVERRAS---------------EGVRLELCTPDRQG 334
Query: 129 LFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
L ++V + NV AEI T A V +VTD AI +P
Sbjct: 335 LLADVTRTFRENGLNVTRAEISTSTKTATNVFYVTD-----AIGNP 375
>gi|297742666|emb|CBI34815.3| unnamed protein product [Vitis vinifera]
Length = 440
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/223 (54%), Positives = 158/223 (70%), Gaps = 9/223 (4%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMN PRVV+DN CA T++KVDS KHGILL+ +QVL D+NL IKKAYISS
Sbjct: 7 DEYEKLVIRMNTPRVVVDNAVCATTTLVKVDSARKHGILLEAVQVLTDLNLSIKKAYISS 66
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D +G K+ D+ VI+YI+Q L +RS+ T++E T
Sbjct: 67 DGRWFMDVFHVTDLNGNKLTDESVINYIEQSL----GCIHHVRSN----SFNGLTALELT 118
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SEV AVLADL CNVV +++WTHN R A++++V D +G I+D +++ I+
Sbjct: 119 GTDRLGLLSEVFAVLADLECNVVESKMWTHNGRIASLIYVKDCDSGNPIEDSQKIDRIEG 178
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYER 225
L NVL+G +D R AKTS+S + + ERRLHQ+MF DRDYER
Sbjct: 179 RLRNVLKGDNDIRSAKTSVS-LAVTHTERRLHQMMFADRDYER 220
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 22/186 (11%)
Query: 2 DDEYAKLIRRMN-PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D E +IR + P V + N +V+ V ++ +L V+ L D+ V+ A I
Sbjct: 217 DYEREPIIRSASESPAVTVQNWVERGYSVVNVQCKDRRKLLFDVVCTLTDMQYVVFHATI 276
Query: 61 SSDGGWFMDVFNVIDCDGKKIRD----KEVIDYIQQRLETDASFAPSLRSSVGVMPTEEH 116
++ G F + DG I + VI +Q +E AS E
Sbjct: 277 NTAGDKAYLEFYIRHTDGSPISSEAERQRVIQCLQAAIERRAS---------------EG 321
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
+E DR GL ++V + NV AEI T ++ A V +VTD A DPK
Sbjct: 322 VRLELCTEDRRGLLADVTRTFRENGLNVTRAEISTTSEIALNVFYVTDAMGNPA--DPKI 379
Query: 177 LSTIKE 182
+ +++
Sbjct: 380 IEAVRQ 385
>gi|297839565|ref|XP_002887664.1| hypothetical protein ARALYDRAFT_476859 [Arabidopsis lyrata subsp.
lyrata]
gi|297333505|gb|EFH63923.1| hypothetical protein ARALYDRAFT_476859 [Arabidopsis lyrata subsp.
lyrata]
Length = 452
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 128/245 (52%), Positives = 167/245 (68%), Gaps = 11/245 (4%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY L R+NPP V IDN +C + T++KVDS+NK GILL+V+QVL D++L I KAYI
Sbjct: 9 FDPEYENLSTRINPPSVSIDNTSCKECTLVKVDSMNKPGILLEVVQVLTDLDLTITKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPTEEH 116
SSDGGWFMDVF+V D G K+ D + IDYI++ L + S + VGV +H
Sbjct: 69 SSDGGWFMDVFHVTDQQGNKVTDSKTIDYIEKVLGPKGHASASQNTWPGKRVGVHSLGDH 128
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
TSIE DRPGL SEV A+LADL+ NVV AE WTHN R A V++V D++T A+ DP+R
Sbjct: 129 TSIEIIARDRPGLLSEVSAILADLNINVVAAEAWTHNRRIACVLYVNDNATSRAVDDPER 188
Query: 177 LSTIKELLFNVLRG--YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVE 234
LS ++E L NVLRG +D + A+TSLS G + +RRLHQ+ F D+DYE AV +++
Sbjct: 189 LSAMEEQLNNVLRGCEQEDEKFARTSLS-IGSTHVDRRLHQMFFADKDYE----AVTKLD 243
Query: 235 DKSSR 239
D +SR
Sbjct: 244 DFASR 248
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 17/169 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P++ +++ +VI V ++ ++ ++ L D+ ++ A ISS G + +
Sbjct: 252 PKITVEHCEEKGYSVINVSCEDRPKLMFDIVCTLTDMQYIVFHATISSSGSHASQEYFIR 311
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG + E ++R+ A R S G S+E DR GL SEV
Sbjct: 312 HKDGCTLDTGE-----KERVVKCLEAAIHRRVSEG-------WSLELCAKDRVGLLSEVT 359
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 183
+L + +V A + T ++A V +V D S +P + TI+ L
Sbjct: 360 RILREHGLSVSRAGVTTVGEQAVNVFYVKDAS-----GNPVDVKTIEAL 403
>gi|224030455|gb|ACN34303.1| unknown [Zea mays]
Length = 437
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 116/204 (56%), Positives = 145/204 (71%), Gaps = 8/204 (3%)
Query: 16 RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVID 75
RVVIDN++C +ATVI+VD VNKHGILL+ +QVL D+NLVI KAYISSDG WFM VFNV D
Sbjct: 11 RVVIDNDSCGNATVIRVDRVNKHGILLEAVQVLVDLNLVITKAYISSDGNWFMHVFNVTD 70
Query: 76 CDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCA 135
DG K+ ++EVID+IQ+ LE+D P +P ++ TSIE TG DRPGL SEVCA
Sbjct: 71 QDGSKLHNREVIDHIQKCLESDGYLVPPANGY--ALPEDQFTSIELTGADRPGLLSEVCA 128
Query: 136 VLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFR 195
VLA L CN+V AE+WTH+ R AAV+ VTD +TG A+ D RLS ++ELL +V+RG
Sbjct: 129 VLATLSCNIVKAEVWTHDGRTAAVIQVTDEATGRAVHDAGRLSRVQELLRDVMRGDGTCN 188
Query: 196 KAKTSLSPPGIMNRERRLHQIMFD 219
+ T +S ERRLH +M D
Sbjct: 189 RGGTGISA------ERRLHTLMLD 206
>gi|356509344|ref|XP_003523410.1| PREDICTED: uncharacterized protein LOC100789173 [Glycine max]
Length = 445
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 127/247 (51%), Positives = 165/247 (66%), Gaps = 10/247 (4%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY RMNPPRV +DN +C D T+IKVDSVNK GILL+V+Q+L D++ +I KAYI
Sbjct: 9 FDPEYENFSNRMNPPRVSMDNASCHDCTLIKVDSVNKPGILLEVVQILTDLDFIITKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPTEEH 116
SSDGGWFMDVF+V D GKKI D + ID+I++ L + +++ VGV +H
Sbjct: 69 SSDGGWFMDVFHVTDQQGKKITDSKTIDFIEKALGPKSQSTEGVKNWPSKRVGVHSVGDH 128
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T+IE G DRPGL SE+ AVLA+LH NV AE+WTHN R A V++V D +T A+ + R
Sbjct: 129 TAIELIGRDRPGLLSEISAVLANLHFNVFAAEVWTHNRRIACVLYVND-ATNQAVDEANR 187
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
LS ++E L N+LRG D + A+TS S G + +RRLHQ++F DRDYE AV R D
Sbjct: 188 LSLMEEQLNNILRGCDGEKVARTSFS-MGSTHMDRRLHQMLFADRDYE--SYAVAREVDS 244
Query: 237 --SSRPQ 241
S RP+
Sbjct: 245 PPSLRPK 251
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 11/152 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P++ I+ +V+ V ++ ++ ++ L D+ V+ A +SSDG + + + +
Sbjct: 250 PKITIERCEEKGYSVVSVKCKDRAKLMFDIVCTLTDMQYVVFHATVSSDGPYALQEYFIR 309
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG + + + + Q +E A R S GV S+E DR GL SEV
Sbjct: 310 HMDGCTLDTQGEKERVIQCIEA----AIRRRVSEGV-------SLELCAKDRVGLLSEVT 358
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
+L + V A + T ++A V +V D S
Sbjct: 359 RILRENGLTVCRAGVSTRGEQALNVFYVRDAS 390
>gi|356515959|ref|XP_003526664.1| PREDICTED: uncharacterized protein LOC100797293 [Glycine max]
Length = 445
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 128/247 (51%), Positives = 164/247 (66%), Gaps = 10/247 (4%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY RMNPPRV +DN +C D T+IK+DSVNK GILL+V+Q+L D++ VI KAYI
Sbjct: 9 FDPEYENFSNRMNPPRVSVDNASCHDCTLIKIDSVNKPGILLEVVQILTDLDFVITKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPTEEH 116
SSDGGWFMDVF+V D GKKI D + ID I++ L + +++ VGV ++
Sbjct: 69 SSDGGWFMDVFHVTDQQGKKITDSKTIDLIEKALGPKSKSTEGVKNWPSKHVGVHSVGDY 128
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T+IE G DRPGL SE+ AVLA+LH NV AE+WTHN R A V++V D +T DPKR
Sbjct: 129 TAIELIGRDRPGLLSEISAVLANLHFNVFAAEVWTHNRRIACVLYVND-ATNQVADDPKR 187
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 236
LS ++E L N+LRG D + A+TS S G + +RRLHQ++F DRDYE AV R D
Sbjct: 188 LSLMEEQLNNILRGCDGEKVARTSFS-MGSTHMDRRLHQMLFADRDYE--SYAVAREVDS 244
Query: 237 --SSRPQ 241
S RP+
Sbjct: 245 PPSLRPR 251
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PR+ I+ +V+ V ++ ++ ++ L D+ V+ A +SSDG + + + +
Sbjct: 250 PRITIERCEEKGYSVVSVKCKDRAKLMFDIVCTLTDMQYVVFHATVSSDGPYALQEYFIR 309
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG + + + + Q +E A R S GV S+E DR GL SEV
Sbjct: 310 HMDGCTLDTQGEKERVIQCIEA----AIRRRVSEGV-------SLELCAKDRVGLLSEVT 358
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
+L + +V A + T ++A V +V D S
Sbjct: 359 RILRENGLSVCRAGVSTRGEQALNVFYVRDAS 390
>gi|356497179|ref|XP_003517440.1| PREDICTED: uncharacterized protein LOC100780903 [Glycine max]
Length = 441
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 120/223 (53%), Positives = 159/223 (71%), Gaps = 9/223 (4%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KLI RMN PRVVIDN+ + AT++KVDS +HGILL ++VL D+NL IKKAYIS+
Sbjct: 8 DEYEKLIIRMNTPRVVIDNSVFSSATLVKVDSARRHGILLDAVEVLADLNLSIKKAYISA 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D +G KI D+ V+ YI+Q L +L + + T++E T
Sbjct: 68 DGKWFMDVFHVTDQNGNKIIDESVLKYIEQSLGNIHYGRTNLSNGL--------TALELT 119
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SEV AVLADL C+VV +++WTHN R A++++V D S+G AI+D ++++ I+
Sbjct: 120 GTDRVGLLSEVFAVLADLQCDVVESKVWTHNGRIASLIYVKDSSSGSAIEDSQKINKIEL 179
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYER 225
L NVL+G +D R AK S S +M+ ERRLHQ+MF DRDYER
Sbjct: 180 RLRNVLKGDNDIRSAKISFS-MAVMHTERRLHQLMFVDRDYER 221
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 67/158 (42%), Gaps = 16/158 (10%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDC 76
V + N +V+ V ++ +L ++ L D+ V+ A I++DG F +
Sbjct: 234 VTVQNWEGRGYSVVNVQCKDRTKLLFDIVCNLTDMEYVVFHATINTDGDRAYLEFYIRHK 293
Query: 77 DGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAV 136
DG I + +QR+ A R+S GV +E DR GL +EV
Sbjct: 294 DGTPISSEPE----RQRVIQCLKAAVERRASEGV-------RLELCTEDRQGLLAEVVRT 342
Query: 137 LADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+ NV AEI T + A + +VTD AI +P
Sbjct: 343 FRENGLNVTRAEISTIGNMAKNIFYVTD-----AIGNP 375
>gi|356514172|ref|XP_003525780.1| PREDICTED: uncharacterized protein LOC100802262 [Glycine max]
Length = 441
Score = 233 bits (595), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 117/223 (52%), Positives = 162/223 (72%), Gaps = 9/223 (4%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RM+ PRVVIDN C+ AT++KVDS KHGIL+ +QVL+D+NL IKKAYISS
Sbjct: 8 DEYEKLVIRMSTPRVVIDNAVCSTATIVKVDSARKHGILIDAVQVLSDLNLSIKKAYISS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D +G K+ DK V+ YI+Q L + + + + + T +E T
Sbjct: 68 DGRWFMDVFHVTDENGDKLTDKSVLSYIEQSLGSIHNAKTNHSNGL--------TILELT 119
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SEV AVLA+ C+VV+A++WTHN R A++++V D ++G I+D +R+STI+
Sbjct: 120 GTDRVGLLSEVFAVLAEQQCDVVDAKVWTHNGRIASLIYVKDSNSGTLIEDSQRISTIEA 179
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYER 225
L NVL+G +D R AKTS++ +++ ERRLHQ+M+ DRDY+R
Sbjct: 180 RLRNVLKGDNDIRNAKTSVT-NAVLHAERRLHQMMYTDRDYQR 221
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 21/172 (12%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + N +V+ + ++ +L V+ L D+ V+ A I + F +
Sbjct: 232 PIVTVQNWAERGYSVVNIQCKDRVKLLFDVVCNLTDMEYVVFHATIKTTIDQAYLEFYIR 291
Query: 75 DCDGKKIRDK----EVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLF 130
DG I + VI +Q +E A E +E DR GL
Sbjct: 292 HRDGTPISSEPERHRVIQCLQAAVERRAY---------------EGVRLELCTEDRQGLL 336
Query: 131 SEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
+EV + NV AEI T + A+ V +VTD + GY + DPK + ++++
Sbjct: 337 AEVMRTFRENGMNVTRAEISTIGNMASNVFYVTD-AVGYPV-DPKIVESVRQ 386
>gi|356546978|ref|XP_003541896.1| PREDICTED: uncharacterized protein LOC100797658 [Glycine max]
Length = 449
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 121/229 (52%), Positives = 157/229 (68%), Gaps = 7/229 (3%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY R+NPPRV +DN++C D T+IK DS+NK GILL+V+Q+L D++ +I KAYI
Sbjct: 9 FDPEYENFSNRINPPRVSVDNDSCHDCTLIKFDSINKPGILLEVVQILTDLDFIITKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPTEEH 116
SSDGGWFMDVF+V D GKKI D + ID+I++ L ++S VGV +H
Sbjct: 69 SSDGGWFMDVFHVTDQQGKKITDSKTIDFIEKTLGPKGQSTEGVKSWKGKRVGVHSIGDH 128
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE G DRPGL SE+ AVLA L NV+ AE+WTHN R A V++V D +T A+ D KR
Sbjct: 129 TVIELIGRDRPGLLSEISAVLASLQFNVIAAEVWTHNRRIACVLYVND-ATNQAMDDSKR 187
Query: 177 LSTIKELLFNVLRGY-DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
LS I+E L ++LRG DD + A+TS S GI + +RRLHQ++F DRDYE
Sbjct: 188 LSIIEEQLNHILRGCEDDEKVARTSFS-MGITHMDRRLHQMLFADRDYE 235
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 68/159 (42%), Gaps = 25/159 (15%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV- 73
P + I+ +V+ V ++ ++ ++ L D+ V+ A ISS+G + + +
Sbjct: 252 PNIRIERIVEKGYSVVSVKCKDRAKLMFDIVCTLTDMEYVVFHATISSEGQYASQEYFIR 311
Query: 74 ------IDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 127
+D +G+K R + I+ QR R S GV S+E DR
Sbjct: 312 HMDGCTLDTEGEKERAIKCIEAAIQR-----------RVSEGV-------SLELCAKDRV 353
Query: 128 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
GL SEV +L + V A + T ++ V +V D S
Sbjct: 354 GLLSEVTRILRENGLTVSRAGVSTVGEKGLNVFYVRDAS 392
>gi|297849610|ref|XP_002892686.1| hypothetical protein ARALYDRAFT_471392 [Arabidopsis lyrata subsp.
lyrata]
gi|297338528|gb|EFH68945.1| hypothetical protein ARALYDRAFT_471392 [Arabidopsis lyrata subsp.
lyrata]
Length = 440
Score = 231 bits (588), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 118/224 (52%), Positives = 163/224 (72%), Gaps = 9/224 (4%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMN PRVVIDN C+ AT++KVDS ++GILL+ +Q+L D+NL IKKAYISS
Sbjct: 8 DEYEKLVIRMNTPRVVIDNGVCSSATIVKVDSSRRNGILLEAVQILTDLNLSIKKAYISS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG W MDVF+V D +G K+ D+ V+ YI+Q +ET + ++ + G+ T++E T
Sbjct: 68 DGRWNMDVFHVTDLNGNKLNDQSVLRYIEQSIET-VYYGENIEVN-GL------TALELT 119
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SE+ AVL+DL+C+VV+A++WTHN R A+V+++ D S+G I D +R+S I+
Sbjct: 120 GTDRIGLLSEMFAVLSDLNCDVVDAKLWTHNGRVASVIYLRDGSSGAPILDSQRISKIEG 179
Query: 183 LLFNVLRGYDDFRK-AKTSLSPPGIMNRERRLHQIMFDDRDYER 225
L NVL G +D AKT +S +M+ ERRLHQ+MF+DRDYER
Sbjct: 180 RLKNVLNGDNDVNSAAKTCVSVDSMMHIERRLHQLMFEDRDYER 223
>gi|242082077|ref|XP_002445807.1| hypothetical protein SORBIDRAFT_07g026100 [Sorghum bicolor]
gi|241942157|gb|EES15302.1| hypothetical protein SORBIDRAFT_07g026100 [Sorghum bicolor]
Length = 476
Score = 231 bits (588), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 122/226 (53%), Positives = 155/226 (68%), Gaps = 3/226 (1%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMNPPRV +DN++ AT++KVDSVNK+G LL+V+QVL D+ L I +AYISS
Sbjct: 18 DEYQKLVLRMNPPRVTVDNDSDMTATLVKVDSVNKYGTLLEVVQVLTDLKLTINRAYISS 77
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDA-SF--APSLRSSVGVMPTEEHTSI 119
DG WFMDVF+V+D DG K+ D +VID I+Q L + SF P +V E T+I
Sbjct: 78 DGEWFMDVFHVVDQDGNKLYDGQVIDRIEQSLGAGSLSFRGPPERLVAVEAEAEEAQTTI 137
Query: 120 EFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLST 179
E G DRPGL SEV AVL DL CN+V +E+WTH+ R AA+V+VTD T AI+DP RL T
Sbjct: 138 ELVGRDRPGLLSEVFAVLTDLKCNIVASEVWTHDGRVAALVYVTDADTLGAIEDPARLDT 197
Query: 180 IKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYER 225
+K LL +VLRG +KA + PG+ + RRLHQ+M DR R
Sbjct: 198 VKRLLRHVLRGSSRDKKASRAAISPGVEHAPRRLHQMMQADRTARR 243
>gi|356563282|ref|XP_003549893.1| PREDICTED: uncharacterized protein LOC100794729 [Glycine max]
Length = 441
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 116/223 (52%), Positives = 161/223 (72%), Gaps = 9/223 (4%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RM+ PRVVIDN C+ AT++KVDS KHGIL+ +QVL+D+NL IKKAYISS
Sbjct: 8 DEYEKLVIRMSTPRVVIDNAVCSTATIVKVDSARKHGILIDAVQVLSDLNLSIKKAYISS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D +G K+ D+ V+ YI+Q L + + S + + T +E T
Sbjct: 68 DGRWFMDVFHVTDQNGNKLTDESVLSYIEQSLGSIHNGKTSHSNGL--------TILELT 119
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SEV AVLA+ C+VV+A++WTHN R A++++V D ++ I+D +R+STI+
Sbjct: 120 GTDRVGLLSEVFAVLAEQQCDVVDAKVWTHNGRIASLIYVKDSNSETPIEDSQRISTIEA 179
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYER 225
L NVL+G +D R AKTS++ +++ ERRLHQ+M+ DRDY+R
Sbjct: 180 RLRNVLKGDNDIRNAKTSVT-NAVLHAERRLHQMMYTDRDYQR 221
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 72/174 (41%), Gaps = 21/174 (12%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
+ P V + N +V+ V ++ +L V+ L ++ V+ A I + F
Sbjct: 230 DTPIVTVQNWAERGYSVVNVQCKDRVKLLFDVVCNLTEMEYVVFHATIKTTIDQAYLEFY 289
Query: 73 VIDCDGKKIRDK----EVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPG 128
+ DG I + VI +Q +E A E +E DR G
Sbjct: 290 IRHKDGTPISSEPERHRVIQCLQAAVERRAF---------------EGVRLELCTEDRQG 334
Query: 129 LFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
L +EV + NV AEI T D A+ V +VTD + GY DPK + ++++
Sbjct: 335 LLAEVMRTFRENGLNVTRAEISTIGDMASNVFYVTD-AIGYP-ADPKIVESVRQ 386
>gi|449528978|ref|XP_004171478.1| PREDICTED: uncharacterized LOC101205369 [Cucumis sativus]
Length = 450
Score = 229 bits (585), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 119/223 (53%), Positives = 158/223 (70%), Gaps = 8/223 (3%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMN PRVVIDN C+ AT++KVDS + G LL+ +QVL D+NL IKKAY+SS
Sbjct: 8 DEYEKLVIRMNTPRVVIDNGACSTATLVKVDSARRFGNLLEAVQVLTDLNLSIKKAYVSS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D +G+K+ D+ VI Y++Q L T R + T T++E T
Sbjct: 68 DGRWFMDVFHVTDQNGEKLTDESVISYLEQSLGT-----THYRRNEEFNGTT--TALELT 120
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SEV AVLADL C+VV A++WTHN R A++++V D ++G I+D +++ TI
Sbjct: 121 GTDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCNSGSPIEDRQKIDTIVA 180
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYER 225
L +VL+G +D R AKTS+S + + ERRLHQ+MF DRDYER
Sbjct: 181 RLRSVLKGDNDIRSAKTSVS-MAVTHTERRLHQMMFADRDYER 222
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 72/177 (40%), Gaps = 20/177 (11%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
N P V + N +V+ V ++ +L VI L D+ V+ A I++ F
Sbjct: 232 NSPAVTVQNCAERGYSVVCVQCKDRTKLLFDVIFTLTDMQYVVFHANINTAQERAYLEFY 291
Query: 73 VIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSE 132
+ DG I + + Q L+ A R+S GV +E DRPGL ++
Sbjct: 292 IRHSDGTPISSEAERQRVIQCLQA----AIQRRASEGV-------RLELCTEDRPGLLAD 340
Query: 133 VCAVLADLHCNV-------VNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
V + NV AEI T D A V +VTD A D K + ++++
Sbjct: 341 VMRTFRENGLNVTRAEISTTRAEISTTRDMALNVFYVTDVVGNVA--DQKTIESVRQ 395
>gi|449460443|ref|XP_004147955.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101205369 [Cucumis sativus]
Length = 449
Score = 229 bits (584), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 119/223 (53%), Positives = 158/223 (70%), Gaps = 8/223 (3%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMN PRVVIDN C+ AT++KVDS + G LL+ +QVL D+NL IKKAY+SS
Sbjct: 8 DEYEKLVIRMNTPRVVIDNGACSTATLVKVDSARRFGNLLEAVQVLTDLNLSIKKAYVSS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D +G+K+ D+ VI Y++Q L T R + T T++E T
Sbjct: 68 DGRWFMDVFHVTDQNGEKLTDESVISYLEQSLGT-----THYRRNEEFNGTT--TALELT 120
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SEV AVLADL C+VV A++WTHN R A++++V D ++G I+D +++ TI
Sbjct: 121 GTDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCNSGSPIEDRQKIDTIVA 180
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYER 225
L +VL+G +D R AKTS+S + + ERRLHQ+MF DRDYER
Sbjct: 181 RLRSVLKGDNDIRSAKTSVS-MAVTHTERRLHQMMFADRDYER 222
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 71/176 (40%), Gaps = 19/176 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
N P V + N +V+ V ++ +L VI L D+ V+ A I++ F
Sbjct: 232 NSPAVTVQNCAERGYSVVCVQCKDRTKLLFDVIFTLTDMQYVVFHANINTAQERAYLEFY 291
Query: 73 VIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSE 132
+ DG I + + Q L+ A R+S GV +E DRPGL ++
Sbjct: 292 IRHSDGTPISSEAERQRVIQCLQA----AIQRRASEGV-------RLELCTEDRPGLLAD 340
Query: 133 VCAVLADLHC------NVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
V + NV AEI T A V +VTD A D K + ++++
Sbjct: 341 VMRTFDVMRTFRENGLNVTRAEISTTRHMALNVFYVTDVVGNVA--DQKTIESVRQ 394
>gi|302784474|ref|XP_002974009.1| hypothetical protein SELMODRAFT_100599 [Selaginella moellendorffii]
gi|302803458|ref|XP_002983482.1| hypothetical protein SELMODRAFT_180275 [Selaginella moellendorffii]
gi|300148725|gb|EFJ15383.1| hypothetical protein SELMODRAFT_180275 [Selaginella moellendorffii]
gi|300158341|gb|EFJ24964.1| hypothetical protein SELMODRAFT_100599 [Selaginella moellendorffii]
Length = 477
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 118/223 (52%), Positives = 153/223 (68%), Gaps = 3/223 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY L R+NPPRVVIDN AT+IK+DS N+HGILL V+QVL D++L I KA+I
Sbjct: 14 FDPEYETLAARINPPRVVIDNKVSEHATIIKLDSSNRHGILLDVVQVLTDLDLSILKAFI 73
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDGGWFMDVF+V D DG K+ D++VI +I+ + A S ++GV EHT+IE
Sbjct: 74 SSDGGWFMDVFHVTDRDGNKLSDEKVIAHIEHKGVCQAYRTCSGARTIGVQSLAEHTAIE 133
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST-GYAIKDPKRLST 179
TG DRPGL SE+ AVLA L CNVV AE+WTHN R A +V+VTDH G +KDP +L
Sbjct: 134 LTGNDRPGLLSEISAVLASLGCNVVAAEVWTHNTRVACMVYVTDHEGHGGPVKDPTKLCH 193
Query: 180 IKELLFNVLRGYD-DFRKAKTSLSPPGIMNRERRLHQIMFDDR 221
IK++L V++G D + A+T + G+ + ERRLHQ+M D+
Sbjct: 194 IKQMLGQVMKGDSLDGKTARTDFA-MGLTHTERRLHQMMSADK 235
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 11/154 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + N +V+ V ++ +L + L D+ V+ A I S+G + +
Sbjct: 265 PTVTVKNCVEKGYSVVTVQCADRPKLLFDTVCTLTDMEYVVFHATIDSEGPNAFQEYYIR 324
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG + + + + LE A R+S GV +E + DR GL S+V
Sbjct: 325 HLDGYTLNTETERQRVVRCLEA----AILRRASQGV-------RLELSTQDRIGLLSDVT 373
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ + +V AE+ T +D A V +VTD + G
Sbjct: 374 RIFRENGLSVARAEVTTRDDMAVNVFYVTDANGG 407
>gi|224124920|ref|XP_002329846.1| predicted protein [Populus trichocarpa]
gi|222871083|gb|EEF08214.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 120/223 (53%), Positives = 156/223 (69%), Gaps = 9/223 (4%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RM PRVVIDN + ATV+KVDS KH ILL+ +QVL D+NL IKKAYISS
Sbjct: 8 DEYEKLVIRMTTPRVVIDNAVSSKATVVKVDSARKHRILLEAVQVLTDLNLSIKKAYISS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D +G K+ D+ VI+YI+Q L T P + + T++E T
Sbjct: 68 DGRWFMDVFHVTDLNGNKLTDESVINYIEQSLGT---IHPGKTTGSNGL-----TALELT 119
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SEV AVLADL C+VV+A++WTHN R A++++V D ++G I+D + + I+
Sbjct: 120 GTDRIGLLSEVFAVLADLQCSVVDAKVWTHNGRIASLMYVKDCNSGSPIEDTQHIDRIEA 179
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYER 225
L NVL+G +D R AKT +S + + ERRLHQ+MF DRDYER
Sbjct: 180 RLRNVLKGDNDIRSAKTMVS-MAVTHTERRLHQVMFADRDYER 221
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 72/174 (41%), Gaps = 21/174 (12%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
+ P V + N +V+ V ++ +L V+ L D+ ++ A I++ G F
Sbjct: 230 DSPVVTVQNWVERGYSVVNVQCKDRTKLLFDVVCTLTDMEYIVFHATINTAGDRAYLEFY 289
Query: 73 VIDCDGKKIRD----KEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPG 128
+ DG I + VI +Q +E AS E +E DR G
Sbjct: 290 IRHTDGTPISSEPERQRVIQCLQAAVERRAS---------------EGVRLELCTPDRQG 334
Query: 129 LFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
L ++V + NV AEI T D A V +VTD A DPK + ++++
Sbjct: 335 LLADVTRTFRENGLNVTRAEISTAGDMALNVFYVTDAVGNPA--DPKLIESVRQ 386
>gi|356502450|ref|XP_003520032.1| PREDICTED: uncharacterized protein LOC100798999 [Glycine max]
Length = 556
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 118/206 (57%), Positives = 148/206 (71%), Gaps = 1/206 (0%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
+P V +DN + TVIKVDS NK G LL+V+QVL D+NL +++AYISSDG WFMDVF+
Sbjct: 128 DPVLVAVDNISSRTDTVIKVDSANKRGSLLEVVQVLTDMNLSVRRAYISSDGEWFMDVFH 187
Query: 73 VIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSE 132
V D +GKK +V D IQQ L AS SLR SVGV EHT+IE TG DRPGL SE
Sbjct: 188 VTDPNGKKFMQDDVADRIQQSLGPRASSFRSLRRSVGVQAEAEHTTIELTGRDRPGLLSE 247
Query: 133 VCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYD 192
V AVLADL CNVV AE+WTHN R A+VV++TD +TG +I DP RL+ IK+LL VL+G
Sbjct: 248 VFAVLADLKCNVVAAEVWTHNSRMASVVYITDEATGLSIDDPDRLAKIKQLLLYVLKGDI 307
Query: 193 DFRKAKTSLSPPGIMNRERRLHQIMF 218
D + A T++S G +++RRLHQ+M+
Sbjct: 308 DKKSANTAVS-VGSTHKDRRLHQLMY 332
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 12/177 (6%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDC 76
V +D+ TV+ + ++ +L + L D+ V+ + ++G + +
Sbjct: 355 VTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHGTVIAEGPEAYQEYYIRHV 414
Query: 77 DGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAV 136
DG I + + LE A R+S G+ +E G DR GL S+V +
Sbjct: 415 DGSPISSEAERQRVIHCLEA----AIRRRTSEGI-------KLELCGEDRVGLLSDVTRI 463
Query: 137 LADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDD 193
+ +V AE+ T +A V +VTD S G + + KE+ +L DD
Sbjct: 464 FRENGLSVNRAEVTTRGTQAMNVFYVTDVS-GNPVNSETIEAVRKEIGLTILHVKDD 519
>gi|356552731|ref|XP_003544716.1| PREDICTED: uncharacterized protein LOC100789044 [Glycine max]
Length = 448
Score = 226 bits (577), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 115/230 (50%), Positives = 152/230 (66%), Gaps = 5/230 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY R+NPPRV +DN++C D T+IK DS+NK GILL+V+Q+L D++ +I KAYI
Sbjct: 9 FDPEYENFSNRINPPRVSVDNDSCHDCTLIKFDSINKPGILLEVVQILTDLDFIITKAYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLR----SSVGVMPTEEH 116
SSDGGWFMDVF+V D GKKI D + ID+I++ L + VGV +H
Sbjct: 69 SSDGGWFMDVFHVTDQQGKKITDSKTIDFIEKTLGPKGQSTEGVNCWQGKRVGVHSIGDH 128
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T+IE G DRPGL SE+ AVLA L NV+ AE+WTHN R A V++V D +T A+ D KR
Sbjct: 129 TAIELIGRDRPGLLSEISAVLASLQFNVIAAEVWTHNRRIACVLYVND-ATNQAMDDSKR 187
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERV 226
LS ++E L ++LRG +D K + G + +RRLHQ++F DRDYE V
Sbjct: 188 LSIMEEQLNHILRGCEDDEKVARTSFTMGFTHMDRRLHQMLFADRDYESV 237
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 25/159 (15%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV- 73
P++ I+ +V+ V ++ ++ ++ L D+ V+ A ISS+G + + +
Sbjct: 252 PKIRIERIVEKGYSVVSVRCKDRAKLMFDIVCTLTDMEYVVFHATISSEGQYASQEYFIR 311
Query: 74 ------IDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 127
+D +G+K R + I+ QR R S GV S+E DR
Sbjct: 312 HMDGCTLDTEGEKERVIKCIEAAIQR-----------RVSEGV-------SLELCAKDRV 353
Query: 128 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
GL SEV +L + V A + T ++ V +V D S
Sbjct: 354 GLLSEVTRILRENGLRVSRAGVSTVGEKGLNVFYVRDAS 392
>gi|15221327|ref|NP_172704.1| ACT domain repeat 8 protein [Arabidopsis thaliana]
gi|8778647|gb|AAF79655.1|AC025416_29 F5O11.14 [Arabidopsis thaliana]
gi|22138106|gb|AAM93433.1| ACR8 [Arabidopsis thaliana]
gi|110737291|dbj|BAF00592.1| hypothetical protein [Arabidopsis thaliana]
gi|111074504|gb|ABH04625.1| At1g12420 [Arabidopsis thaliana]
gi|332190757|gb|AEE28878.1| ACT domain repeat 8 protein [Arabidopsis thaliana]
Length = 441
Score = 226 bits (577), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 117/227 (51%), Positives = 162/227 (71%), Gaps = 9/227 (3%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMN PRVVIDN C+ AT++KVDS ++GILL+ +Q+L D+NL IKKAYISS
Sbjct: 8 DEYEKLVIRMNTPRVVIDNGVCSSATIVKVDSSRRNGILLEAVQILTDLNLSIKKAYISS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG W MDVF+V D +G K+ D+ V+ YI+Q +ET + ++ + G+ T++E T
Sbjct: 68 DGTWNMDVFHVTDLNGNKLNDQSVLRYIEQSIET-VYYGENIEVN-GL------TALELT 119
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SE+ AVL+DL+C+VV+A++WTHN R A+V+++ D +G I D R+S I+
Sbjct: 120 GTDRIGLLSEMFAVLSDLNCDVVDAKLWTHNGRVASVIYLKDCISGAPILDSHRISKIEG 179
Query: 183 LLFNVLRGYDDFRK-AKTSLSPPGIMNRERRLHQIMFDDRDYERVEK 228
L NVL G +D AKT ++ +M+ ERRLHQ+MF+DRDYER K
Sbjct: 180 RLKNVLNGDNDVNSAAKTCVTVDSMMHIERRLHQLMFEDRDYERRSK 226
>gi|357477003|ref|XP_003608787.1| hypothetical protein MTR_4g101950 [Medicago truncatula]
gi|355509842|gb|AES90984.1| hypothetical protein MTR_4g101950 [Medicago truncatula]
Length = 441
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 110/222 (49%), Positives = 159/222 (71%), Gaps = 9/222 (4%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RM+ PRVVIDN C+++T++K DS KHGILL+ +Q+L+D+NL IKKAY+SS
Sbjct: 8 DEYEKLVFRMSTPRVVIDNAVCSNSTIVKFDSARKHGILLEAVQILSDLNLFIKKAYVSS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D +G K+ D+ V+ YI+Q L + + + R+ + T++E
Sbjct: 68 DGRWFMDVFHVTDQNGNKLTDESVLKYIEQSLSSIYNGKTNHRNGL--------TALELK 119
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SEV AVLA+L C+VV A++WTHN R A++++V D TG +I+D ++++ ++
Sbjct: 120 GTDRVGLLSEVFAVLAELQCDVVEAKVWTHNGRTASLIYVKDSITGTSIEDSQKINRLEA 179
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
L VL+G D R A TS+S +++ ERRLHQ+MF DRDY+
Sbjct: 180 RLRYVLQGDSDIRSATTSIS-DAVIHPERRLHQMMFADRDYQ 220
>gi|357481871|ref|XP_003611221.1| hypothetical protein MTR_5g011580 [Medicago truncatula]
gi|355512556|gb|AES94179.1| hypothetical protein MTR_5g011580 [Medicago truncatula]
Length = 441
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 115/223 (51%), Positives = 156/223 (69%), Gaps = 9/223 (4%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RM+ PRVVIDN C+ AT++KV S ++G LL IQVL D+NL+IKKAYISS
Sbjct: 8 DEYEKLLIRMSTPRVVIDNAVCSTATLVKVISARRNGSLLNAIQVLIDLNLLIKKAYISS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V +G KI D+ ++ YI+Q L + + + + + V+ E +
Sbjct: 68 DGKWFMDVFHVTHQNGSKIIDENILKYIEQSLGSTHNVRTNCSNGLTVL--------ELS 119
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
GTDR GL SEV AVLADL C+VV A++WTHN R A++++V D +G I+D +++ I+
Sbjct: 120 GTDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCDSGSTIEDSQKIKKIEV 179
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYER 225
L NVL+G +D R AKTS+S +M+ ERRLHQ+MF DRDYER
Sbjct: 180 RLRNVLKGDNDIRSAKTSVSMS-VMHSERRLHQMMFADRDYER 221
>gi|359496882|ref|XP_002265013.2| PREDICTED: uncharacterized protein LOC100264704 [Vitis vinifera]
gi|296085715|emb|CBI29515.3| unnamed protein product [Vitis vinifera]
Length = 468
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 115/235 (48%), Positives = 157/235 (66%), Gaps = 10/235 (4%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D +Y LI R++PPRV IDN+ C D T++KVDS NKHGILL+++QVL D+ LVI K+YI
Sbjct: 9 FDPDYESLIERIHPPRVCIDNDACQDCTLVKVDSANKHGILLEMVQVLTDLELVISKSYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETD--ASFAPSLRSSVG--VMP---T 113
SDGGWFMDVF+V D G K+ D+ +I YIQQ L + + L++ +G + P +
Sbjct: 69 CSDGGWFMDVFHVTDQLGNKLTDESLILYIQQALCANRKQGISKELQARLGREMNPRHVS 128
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
EHT+ E TGTDRPGL SE+ AVLA+L C+V A WTHN R A ++ + D G I+D
Sbjct: 129 TEHTAFEITGTDRPGLMSEISAVLAELSCHVTAAVAWTHNSRVACIICLEDELKGGPIRD 188
Query: 174 PKRLSTIKELLFNVLRG-YDDFRKAKTSLSPP--GIMNRERRLHQIMFDDRDYER 225
P+RL+ ++E L NV+ + + K L+ P G + +RRLHQ+MF D+DYER
Sbjct: 189 PERLAHVEEQLENVVEARHQSGERRKVRLTAPVAGRTHTDRRLHQLMFADKDYER 243
Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 67/151 (44%), Gaps = 11/151 (7%)
Query: 16 RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVID 75
+V I+N +V+ V S ++ +L + L D+ V+ A +SS G + + +
Sbjct: 256 QVSIENCKEKGYSVVNVKSRDRPKLLFDTVCTLTDMQYVVFHAAVSSKGSIAVQEYFIRQ 315
Query: 76 CDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCA 135
DG + + + + Q L A R + G+ ++ +R GL S++
Sbjct: 316 MDGCTLGTQSERNRVAQCLIA----AIERRVTHGL-------RLDIRIKNRLGLLSDITR 364
Query: 136 VLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
V + ++ AEI H +RA+ +VTD S
Sbjct: 365 VFRENGLSIRMAEIGIHGERASGSFYVTDVS 395
>gi|302794344|ref|XP_002978936.1| hypothetical protein SELMODRAFT_109915 [Selaginella moellendorffii]
gi|300153254|gb|EFJ19893.1| hypothetical protein SELMODRAFT_109915 [Selaginella moellendorffii]
Length = 452
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/230 (51%), Positives = 148/230 (64%), Gaps = 11/230 (4%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIK-----VDSVNKHGILLQVIQVLNDVNLVI 55
D EY L R++PP VVIDN +C DAT+IK VDS NKHGILL+V+QVL D++L I
Sbjct: 3 FDPEYDTLSLRLDPPSVVIDNTSCPDATLIKATPLPVDSKNKHGILLEVVQVLTDLDLAI 62
Query: 56 KKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL-----ETDASFAPSLRSSVGV 110
KAYISSDGGWFMDVF+V D G K+ D+ +IDYIQQ L L V +
Sbjct: 63 SKAYISSDGGWFMDVFHVTDQLGNKLTDEGIIDYIQQSLGAKQDSQTTEVQTCLGRRVSL 122
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
E T+IE G DRPGL S++ VL D+ CNVV AE+WTHN R A VV+VTD TG
Sbjct: 123 RSNTEQTAIELCGRDRPGLLSDISGVLKDMMCNVVAAEVWTHNLRVACVVYVTDEVTGGP 182
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDD 220
I+D K+L+ IK L L+G + + +KT + P +++ ERRLHQIM D
Sbjct: 183 IEDEKKLAVIKARLSQALQGDESGKGSKTDI-PMAVLHTERRLHQIMSAD 231
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P + + N +V+ V ++ +L + L D+ V+ A I S+G + + +
Sbjct: 252 PAISVQNCAEKGYSVVNVRCNDRPKLLFDTVCTLTDMKYVVFHAAIRSEGSFAYQEYYIR 311
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG ++ + +Y+ + LE A R+ G+ +E DR GL S+V
Sbjct: 312 LMDGCTLKSEAEQEYVVKCLEA----AIERRTGGGI-------RLELCTKDRVGLLSDVT 360
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
+ + +V A++ T D+A V +VTD S
Sbjct: 361 RIFRENGLSVTRADVSTQGDKAVNVFYVTDAS 392
>gi|302809521|ref|XP_002986453.1| hypothetical protein SELMODRAFT_124305 [Selaginella moellendorffii]
gi|300145636|gb|EFJ12310.1| hypothetical protein SELMODRAFT_124305 [Selaginella moellendorffii]
Length = 452
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 118/230 (51%), Positives = 152/230 (66%), Gaps = 11/230 (4%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIK-----VDSVNKHGILLQVIQVLNDVNLVI 55
D EY L R++PP VVIDN +C DAT+IK VDS NKHGILL+V+QVL D++L I
Sbjct: 3 FDPEYDTLSLRLDPPSVVIDNTSCPDATLIKATPLPVDSKNKHGILLEVVQVLTDLDLAI 62
Query: 56 KKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDA-SFAPSLRSSVG----V 110
KAYISSDGGWFMDVF+V D G K+ D+ +IDYIQQ L S +++ +G +
Sbjct: 63 SKAYISSDGGWFMDVFHVTDQLGNKLIDEGIIDYIQQSLGAKQDSQTTEVQTCLGRRFSL 122
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
E T+IE G DRPGL S++ VL D+ CNVV AE+WTHN R A VV+VTD TG
Sbjct: 123 RSNTEQTAIELCGRDRPGLLSDISGVLKDMMCNVVAAEVWTHNLRVACVVYVTDEVTGGP 182
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDD 220
I+D K+L+ IK L L+G + + +KT + P +++ ERRLHQIM D
Sbjct: 183 IEDEKKLAVIKARLSQALQGDESGKGSKTDI-PMAVLHTERRLHQIMSAD 231
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 11/152 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P + + N +V+ V ++ +L + L D+ V+ A I S+G + + +
Sbjct: 252 PAISVQNCAEKGYSVVNVRCKDRPKLLFDTVCTLTDMKYVVFHAAIRSEGSFAYQEYYIR 311
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG ++ + +Y+ + LE A R+ G+ +E DR GL S+V
Sbjct: 312 LMDGCTLKSEAEQEYVVKCLEA----AIERRTGGGI-------RLELCTKDRVGLLSDVT 360
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
+ + +V A++ T D+A V +VTD S
Sbjct: 361 RIFRENGLSVTRADVSTQGDKAVNVFYVTDAS 392
>gi|226506214|ref|NP_001148163.1| LOC100281771 [Zea mays]
gi|195616314|gb|ACG29987.1| ACR5 [Zea mays]
gi|414869678|tpg|DAA48235.1| TPA: ACR5 [Zea mays]
Length = 471
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 123/225 (54%), Positives = 156/225 (69%), Gaps = 4/225 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
M DEY KL+ RMNPPRV +DN++ AT++KVDS NK+G LL+V+QVL D+ L IK+AYI
Sbjct: 12 MVDEYEKLVLRMNPPRVTVDNDSDMTATLLKVDSANKYGTLLEVVQVLTDLKLTIKRAYI 71
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDA-SF--APSLRSSVGVMPTEEHT 117
SSDG WFMDVF+V+D DG K+ D +VID I+Q L + SF P +V E T
Sbjct: 72 SSDGEWFMDVFHVVDQDGNKLYDCQVIDRIEQSLGAGSLSFRGPPERAVAVEAEAEEAQT 131
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
+IE G DRPGL SEV AVLADL CNVV +E+WTH+ R AA+VHVTD T AI+DP RL
Sbjct: 132 TIELVGRDRPGLLSEVFAVLADLRCNVVASEVWTHDGRVAALVHVTDADTLGAIEDPARL 191
Query: 178 STIKELLFNVLRGYD-DFRKAKTSLSPPGIMNRERRLHQIMFDDR 221
T + LL +VLRG D + A+ ++S + + RRLHQ+M DR
Sbjct: 192 DTARRLLRHVLRGSSRDKKAARAAVSARVVEHAPRRLHQMMRADR 236
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 11/154 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V +++ T++ V ++ +L + L D+ V+ + ++G + +
Sbjct: 260 PVVAVEDCAERGYTLVNVRCRDRAKLLFDTVCTLTDMQYVVFHGTVIAEGSEAYQEYYIR 319
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
D + E + +++ LE A R + G+ +E DR GL S+V
Sbjct: 320 HLDDRAASSGEERERLRRGLEA----AIQRRYTEGL-------RLELCCEDRVGLLSDVT 368
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
V + +V +AE+ T RAA V +V D S+G
Sbjct: 369 RVFREHGLSVTHAEVGTRGARAANVFYVVDASSG 402
>gi|219886627|gb|ACL53688.1| unknown [Zea mays]
Length = 471
Score = 219 bits (559), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 122/225 (54%), Positives = 153/225 (68%), Gaps = 4/225 (1%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
M DEY KL+ RMNPPRV +DN++ AT++KVDS NK+G LL+V+QVL D+ L IK+AYI
Sbjct: 12 MVDEYEKLVLRMNPPRVTVDNDSDMTATLLKVDSANKYGTLLEVVQVLTDLKLTIKRAYI 71
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDA-SF--APSLRSSVGVMPTEEHT 117
SSDG WFMDVF+V+D DG K+ D +VID I+Q L + SF P +V E T
Sbjct: 72 SSDGEWFMDVFHVVDQDGNKLYDCQVIDRIEQSLGAGSLSFRGPPERAVAVEAEAEEAQT 131
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
+IE G DRPGL SEV AVLADL CNVV +E+WTH+ R AA+VHVTD T AI+DP RL
Sbjct: 132 TIELVGRDRPGLLSEVFAVLADLRCNVVASEVWTHDGRVAALVHVTDADTLGAIEDPARL 191
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE-RRLHQIMFDDR 221
T + LL +VLRG +KA + ++ RRLHQ+M DR
Sbjct: 192 DTARRLLRHVLRGSSRDKKAARAAVSARVVEYAPRRLHQMMRADR 236
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 11/154 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V +++ T++ V ++ +L + L D+ V+ + ++G + +
Sbjct: 260 PVVAVEDCAERGYTLVNVRCRDRAKLLFDTVCTLTDMQYVVFHGTVIAEGSEAYQEYYIR 319
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
D + E + +++ LE A R + G+ +E DR GL S+V
Sbjct: 320 HLDDRAASSGEERERLRRGLEA----AIQRRYTEGL-------RLELCCEDRVGLLSDVT 368
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
V + +V +AE+ T RAA V +V D S+G
Sbjct: 369 RVFREHGLSVTHAEVGTRGARAANVFYVVDASSG 402
>gi|293332811|ref|NP_001169709.1| hypothetical protein [Zea mays]
gi|224031079|gb|ACN34615.1| unknown [Zea mays]
gi|413921674|gb|AFW61606.1| hypothetical protein ZEAMMB73_976911 [Zea mays]
Length = 473
Score = 219 bits (558), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 122/223 (54%), Positives = 154/223 (69%), Gaps = 4/223 (1%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMNPPRV +DN++ AT++KVDS NK+G LL+V+QVL D+ L I +AYISS
Sbjct: 15 DEYEKLVLRMNPPRVTVDNDSDMTATLVKVDSANKYGTLLEVVQVLTDLKLTINRAYISS 74
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDA-SF--APSLRSSVGVMPTEEHTSI 119
DG WFMDVF+V+D DG K+ D +VID I+Q L + SF P +V E T+I
Sbjct: 75 DGEWFMDVFHVVDQDGNKLYDGQVIDRIEQSLGAGSLSFRGPPERLVAVEAEAEEAQTTI 134
Query: 120 EFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLST 179
E G DRPGL SEV AVLADL CNVV +E+WTH+ R AA+VHVTD T AI DP RL T
Sbjct: 135 ELVGRDRPGLLSEVFAVLADLRCNVVASEVWTHDGRVAALVHVTDADTLGAIDDPARLDT 194
Query: 180 IKELLFNVLRGYD-DFRKAKTSLSPPGIMNRERRLHQIMFDDR 221
+K LL +VLRG D + A+ ++S + + RRLHQ+M DR
Sbjct: 195 VKRLLRHVLRGSSRDKKAARAAVSSARVEHAPRRLHQMMQADR 237
>gi|255568655|ref|XP_002525301.1| amino acid binding protein, putative [Ricinus communis]
gi|223535459|gb|EEF37129.1| amino acid binding protein, putative [Ricinus communis]
Length = 477
Score = 213 bits (542), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 111/234 (47%), Positives = 153/234 (65%), Gaps = 10/234 (4%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+D E+ LI R+ PPRV IDN C D TV+KVDS NKHGILL+++QVL D++LVI K+YI
Sbjct: 9 IDPEFESLIERIYPPRVCIDNEACQDCTVVKVDSANKHGILLEMVQVLTDLDLVISKSYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETD--ASFAPSLRSSVG--VMP---T 113
SDGGWFMDVF+V D G K+ D+ +I YIQQ L T+ A + L++ + V P +
Sbjct: 69 CSDGGWFMDVFHVTDQLGNKLTDESLILYIQQALCTNRRAGASQELQNCLKREVRPRHVS 128
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
+HT++E TG DRPG+ SE+ AVLA+L C+V A WTHN RAA ++++ D +G I D
Sbjct: 129 TDHTAMEMTGIDRPGMLSEISAVLAELQCHVTAAVAWTHNSRAACIIYMEDGLSGGPITD 188
Query: 174 PKRLSTIKELLFNVL---RGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
+L+ ++E L NV+ G + R + + G + ERRLHQ+M DYE
Sbjct: 189 SNKLAHVEEQLQNVVEAHHGIGEMRSVRLASPVTGQTHTERRLHQLMSATLDYE 242
>gi|224129764|ref|XP_002320665.1| predicted protein [Populus trichocarpa]
gi|222861438|gb|EEE98980.1| predicted protein [Populus trichocarpa]
Length = 482
Score = 213 bits (542), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 110/242 (45%), Positives = 153/242 (63%), Gaps = 11/242 (4%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+D E+ L+ R+ PPRV +DN T D T+IKVDS NK GILL+++QVL D++LVI K+YI
Sbjct: 10 IDAEFESLMERIYPPRVCVDNETYQDCTLIKVDSANKQGILLEMVQVLTDLDLVISKSYI 69
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGV-------MPT 113
SSDGGWFM+VF+V D G K+ D +I YIQQ L D S S + +
Sbjct: 70 SSDGGWFMEVFHVTDQLGSKLTDDSLILYIQQALCVDRRRGVSKESQTSLHREVRPPYAS 129
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
+HT++E TGTDRPGL SE+ AVL+ L C+V + +WTHN+RAA+++++ D G I D
Sbjct: 130 TDHTAMEITGTDRPGLLSEISAVLSKLECHVTASAVWTHNNRAASIIYMEDGFQGGPITD 189
Query: 174 PKRLSTIKELLFNVL---RGYDDFRKAKTSLSPPGIMNRE-RRLHQIMFDDRDYERVEKA 229
PKRL+ ++E L NV+ G + R + + PG RRLHQ+M+ + DYE +
Sbjct: 190 PKRLAHVQEQLENVVEAHHGVGERRSVRLTAPAPGQKTHTGRRLHQLMYANMDYEPCQGC 249
Query: 230 VG 231
G
Sbjct: 250 NG 251
Score = 37.0 bits (84), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 76/177 (42%), Gaps = 15/177 (8%)
Query: 8 LIRRMNPPRVVIDNNTCADA--TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
L R N ++ + ++C + +V+ V S ++ +L + L D+ V+ A +S+ G
Sbjct: 254 LAHRNNCTKIHVSIDSCKEKGYSVVNVRSRDRPKLLFDTLCALTDMQYVVFHAAVSAKGT 313
Query: 66 WFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTD 125
+ + DG +D +R + ++ V ++ +
Sbjct: 314 MADQEYFIRQQDGC------TLDTESERHKLTQCLIAAIERRV-----SHGARLDICTHN 362
Query: 126 RPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
R GL S V + ++ AEI T+ DRA +VTD ++GY +P+ + +K+
Sbjct: 363 RMGLLSNVTRAFRENGLSISRAEIGTNGDRAVGSFYVTD-ASGYE-ANPQAIDEVKK 417
>gi|115446687|ref|NP_001047123.1| Os02g0555600 [Oryza sativa Japonica Group]
gi|46389854|dbj|BAD15455.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|50725785|dbj|BAD33316.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|113536654|dbj|BAF09037.1| Os02g0555600 [Oryza sativa Japonica Group]
gi|215701465|dbj|BAG92889.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 481
Score = 213 bits (541), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 110/234 (47%), Positives = 151/234 (64%), Gaps = 17/234 (7%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY +R+NPPRV IDN+TC+D T++KVDS+NK+GILL+V+QVL+D++L I KAYI
Sbjct: 5 FDPEYENFSQRINPPRVCIDNSTCSDCTLVKVDSMNKNGILLEVVQVLSDLDLAISKAYI 64
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS------SVGVMPTE 114
+SDGGWFMDVF+V+D G+K+ D++ I +I++ L D++ + SVG+
Sbjct: 65 TSDGGWFMDVFHVVDKQGQKVTDEKTIKHIEKALGPDSNLLGGAKGGSSPVRSVGMHSIG 124
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+HT+IE G DR GL SEV AVLA+L CNV+ AE+WTH R A VV+V D ++G A+ DP
Sbjct: 125 DHTAIELKGPDRTGLLSEVFAVLAELGCNVLAAEVWTHRARVACVVYVNDVASGQAVGDP 184
Query: 175 KRLSTIKELLFNVLRGYDDFRKAKTSLSPPGI-----------MNRERRLHQIM 217
RLS I+ L VLRG+ P + +RRLHQ+M
Sbjct: 185 CRLSRIEHRLRLVLRGHAGGDDGDGDDGPAHANFFSSGGAGSNTHVDRRLHQLM 238
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 17/173 (9%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V +++ D +V+ V ++ +L ++ L D++ V+ A +SSDG + + +
Sbjct: 270 PVVTVEHCEEKDYSVVNVKCRDRSKLLFDIVCTLTDMHYVVSHASVSSDGIYGIQELYIR 329
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG+ ++ E I+ LE A S R S G ++E G DR GL S+V
Sbjct: 330 RKDGRTLQKDEAGRVIKC-LEA----AISRRVSEGF-------TLELCGRDRVGLLSDVT 377
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 187
VL + V A++ T +A V +V D S +P + TI+ L V
Sbjct: 378 RVLREHGLTVTRADVTTVGGQAINVFYVRDAS-----GEPVDMKTIEGLRVQV 425
>gi|218201514|gb|EEC83941.1| hypothetical protein OsI_30028 [Oryza sativa Indica Group]
Length = 467
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/231 (51%), Positives = 151/231 (65%), Gaps = 12/231 (5%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DE+ KL+ RMNPPRV +DN + AT++KVDS NK+G LL+V+QVL ++ L IK+AYISS
Sbjct: 12 DEFEKLVIRMNPPRVTVDNTSDMTATLVKVDSANKYGTLLEVVQVLTELKLTIKRAYISS 71
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDA-SF-APSLRS-SVGVMPTEEHTSI 119
DG WFMDVF+V+D DG K+ D +VID I+ L + SF AP RS V T+I
Sbjct: 72 DGEWFMDVFHVVDQDGNKLYDGQVIDRIELSLGAGSLSFRAPPERSVEVEAEAAAAQTAI 131
Query: 120 EFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLST 179
E G DRPGL SEV AVL DL CN+V++E+WTH+ R AA+VHVTD T AI D RL T
Sbjct: 132 ELIGKDRPGLLSEVFAVLTDLKCNIVSSEVWTHDARMAALVHVTDADTLGAIDDQDRLDT 191
Query: 180 IKELLFNVLRG-----YDDFRKAKTSLSPP----GIMNRERRLHQIMFDDR 221
+K LL ++LRG D A+ + P + RRLHQ+M DDR
Sbjct: 192 VKRLLRHLLRGGGAGARDRKDTARADIPAPRRDGAAAHAPRRLHQMMHDDR 242
>gi|224095019|ref|XP_002310330.1| predicted protein [Populus trichocarpa]
gi|222853233|gb|EEE90780.1| predicted protein [Populus trichocarpa]
Length = 482
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 114/247 (46%), Positives = 151/247 (61%), Gaps = 21/247 (8%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+D E+ LI R+ PPRV IDN D T++K DS NKHGILL+++QVL D++LVI K+YI
Sbjct: 9 IDPEFESLIERIYPPRVCIDNEAYQDCTLVKADSANKHGILLEMVQVLTDLDLVISKSYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPT------- 113
SSDGGWFMDVF+V D G K+ D+ +I YIQQ L A R +PT
Sbjct: 69 SSDGGWFMDVFHVTDQLGNKLTDESLILYIQQAL-----CANRRRGVSKELPTCLNREVR 123
Query: 114 -----EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
EHT++E GTDRPGL SE+ AVL +L C+V A WTHN RAA+++++ D G
Sbjct: 124 PRHVSTEHTTLEMAGTDRPGLLSEISAVLFELECHVTAALAWTHNTRAASIIYMEDGFRG 183
Query: 169 YAIKDPKRLSTIKELLFNVL---RGYDDFRKAKTSLSPPGIMNR-ERRLHQIMFDDRDYE 224
I DPKRL+ ++E L NV+ G + R + + PG ERRLHQ+M+ + DYE
Sbjct: 184 GPITDPKRLAHVQEQLENVVEARHGMGERRSVRLTAPAPGQQTHTERRLHQLMYANIDYE 243
Query: 225 RVEKAVG 231
+ G
Sbjct: 244 PCQGCNG 250
>gi|413937243|gb|AFW71794.1| hypothetical protein ZEAMMB73_478784 [Zea mays]
gi|413937244|gb|AFW71795.1| hypothetical protein ZEAMMB73_478784 [Zea mays]
gi|413937245|gb|AFW71796.1| hypothetical protein ZEAMMB73_478784 [Zea mays]
Length = 460
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 115/243 (47%), Positives = 158/243 (65%), Gaps = 26/243 (10%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY +R+NPPRV IDN TC+D T++KVDS+NK+GILL+V+QVL+D++L I KAYI
Sbjct: 5 FDPEYENFNQRINPPRVCIDNTTCSDCTLVKVDSMNKNGILLEVLQVLSDLDLHIFKAYI 64
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASF-----APSLRSSVGVMPTEE 115
+SDGGWFMDVF+V+D G+KI D + I YI++ L +++ + S SVG+ +
Sbjct: 65 TSDGGWFMDVFHVVDKQGQKITDDKTIKYIEKALGPESNLLGAKGSNSAGRSVGLHSIGD 124
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
HT+IE G DR GL SE+ AVLADL CNV+ AE+WTH R A VV+V D +TG AI DP
Sbjct: 125 HTAIELKGPDRRGLLSEIFAVLADLQCNVLAAEVWTHRMRVACVVYVNDVATGQAIDDPD 184
Query: 176 RLSTIKELLFNVLR----------------GYDDFRKAKTSLSPPGIMNRERRLHQIMFD 219
R++ +++ L +VLR + +F A S +P + +RRLHQ+M
Sbjct: 185 RVARVEDRLRHVLRGYGGGGGAGDDDDGSGAHANF--AAASSTPHHV---DRRLHQLMHA 239
Query: 220 DRD 222
D D
Sbjct: 240 DVD 242
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 12/152 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V +++ +V+ V ++ +L ++ L D+ V+ A +SS+ + + +
Sbjct: 260 PAVTVEHCEEKSYSVVNVKCKDRSKLLFDIVCTLTDMEYVVFHAAVSSEANYGIQELYIR 319
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DGK + E I+ LE A S R S G ++E G DR GL S+V
Sbjct: 320 RKDGKTLLKDEAEKVIRC-LEA----AISRRVSEGF-------TLEVCGRDRVGLLSDVT 367
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
VL + V A++ T +A V +V + S
Sbjct: 368 RVLREHGLTVSRADVTTAGGQATNVFYVRNPS 399
>gi|224141917|ref|XP_002324307.1| predicted protein [Populus trichocarpa]
gi|222865741|gb|EEF02872.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 115/243 (47%), Positives = 154/243 (63%), Gaps = 19/243 (7%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D ++ L R+ P V IDN + D TV+KVDSVNK G+LL+V+QVL D+NL I K YI
Sbjct: 9 FDPDFDSLPERIFGPTVCIDNESMEDCTVVKVDSVNKQGLLLEVVQVLTDLNLTIAKGYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETD--ASFAPSLRSSVGVM----PTE 114
SSD GWFMDVF+V D GKK+RD+ VI+YIQQ + D S+ P+ R+ + +
Sbjct: 69 SSDAGWFMDVFHVKDEHGKKLRDQNVINYIQQVINCDLSPSYPPNARAYTNNIFEADHSS 128
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
EHT+IE +GTDRPGLFSE+ A LADL CN+V W+HN R A V +++D S+ I+DP
Sbjct: 129 EHTAIEMSGTDRPGLFSEISAALADLQCNIVEVHAWSHNARLACVAYISDPSSHTPIEDP 188
Query: 175 KRLSTIKELLFNVLRGYD----------DFRKAKTS--LSPPG-IMNRERRLHQIMFDDR 221
RL++I++ L VLR + R+ KT L G + N ERRLHQ+M R
Sbjct: 189 HRLASIEDHLTTVLRANTVRSAGEPSQINNREVKTGGFLGGEGTVSNVERRLHQLMLSVR 248
Query: 222 DYE 224
D++
Sbjct: 249 DFD 251
Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 14/152 (9%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS--DGGWFMDVFNVI 74
V I+N + +++ ++ ++ ++ I LND+ VI A +SS DG F + F +
Sbjct: 274 VSIENCDQKEYSIVNIECKDRRRLMFDTICTLNDMQYVIFHASVSSDHDGRAFQEYF-IR 332
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG + + + + LE A R S GV+ ++ +R GL S++
Sbjct: 333 HKDGYARNTESEKERVIKCLEA----AIERRVSEGVL-------LKLRAENRLGLLSDIT 381
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
VL + VV A++ T ++A +V D S
Sbjct: 382 RVLRENGLAVVRADVATEGEKAVNAFYVRDIS 413
>gi|326515010|dbj|BAJ99866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 458
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 114/228 (50%), Positives = 152/228 (66%), Gaps = 6/228 (2%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DE+ KL+ MNPPRV +DN + AT++KVDS NK+G LL+V+QVL D+ L I +AYISS
Sbjct: 13 DEFQKLVINMNPPRVTVDNTSDMTATLVKVDSANKYGTLLEVVQVLTDLKLAINRAYISS 72
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDA-SFAPSLRSSVGVMPTEE--HTSI 119
DG WFMDVF+V+D +G K+ D +VID I+Q L + SF + R VGV E T I
Sbjct: 73 DGEWFMDVFHVVDEEGNKLYDGQVIDRIEQSLGAGSLSFRGTDR-CVGVEAEAEAAQTVI 131
Query: 120 EFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLST 179
E G DRPGL SEV AVL +L CN+ +E+WTH+ R AA+++VTD TG +I++P+RL T
Sbjct: 132 ELIGRDRPGLLSEVFAVLTNLKCNIAASEVWTHDGRMAALMYVTDAETGGSIEEPERLDT 191
Query: 180 IKELLFNVLRGYDDFRKAKTSLSPPGIM--NRERRLHQIMFDDRDYER 225
+K LL +VLRG +KA + + +RRLHQ+M DR R
Sbjct: 192 VKRLLRHVLRGSSRDKKAARAAISARAAAPHAQRRLHQMMHADRGVHR 239
>gi|357148614|ref|XP_003574833.1| PREDICTED: uncharacterized protein LOC100821029 [Brachypodium
distachyon]
Length = 472
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 112/223 (50%), Positives = 148/223 (66%), Gaps = 10/223 (4%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DE+ KL+ RMNPPRV +DN + AT++KVDS NK+G LL+V+QVL D+ L I +AYISS
Sbjct: 15 DEFEKLVIRMNPPRVTVDNESDITATLVKVDSANKYGTLLEVVQVLTDLKLTINRAYISS 74
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDA-SF-APSLRSSVGVMPTEEHTSIE 120
DG WFMDVF+V+D +G K+ D +VID I+Q L + SF A + + T+IE
Sbjct: 75 DGEWFMDVFHVVDEEGNKLYDGQVIDRIEQSLGAGSLSFRATDAETETAAAAMAQATAIE 134
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK---DPKRL 177
G DRPGL SEV AVL +L CN+ ++E+WTH+ R AA+V VTD TG I+ DP+RL
Sbjct: 135 LVGRDRPGLLSEVFAVLTNLRCNIASSEVWTHDGRMAALVRVTDADTGAGIEEDDDPERL 194
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDD 220
T+K LL +VLRG +A P G ++ RRLHQ+M D
Sbjct: 195 DTVKRLLRHVLRG-----RAAVQARPGGALHAHRRLHQMMSAD 232
>gi|449508537|ref|XP_004163340.1| PREDICTED: uncharacterized protein LOC101229243 [Cucumis sativus]
Length = 476
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 113/254 (44%), Positives = 161/254 (63%), Gaps = 15/254 (5%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+D + LI R+ PPRV IDN+T D T++KVDS NKHGILL+++QVL D++LVI K+YI
Sbjct: 11 VDPQLELLIERIYPPRVCIDNDTFQDCTLVKVDSANKHGILLEMVQVLTDLDLVISKSYI 70
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL-ETDASFAP---SLRSSVGVMPTEEH 116
SSDGGWFMDVF+V D G K+ D+ +I YI+Q L + +P + ++ + + EH
Sbjct: 71 SSDGGWFMDVFHVTDQFGNKLTDESLIHYIKQALCASRKEGSPRKVRMCNTGKELLSPEH 130
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T+ E TG DRPGL SE+ AVL +L CNV A WTH+ +AA+++++ + G IKD KR
Sbjct: 131 TAAEITGIDRPGLLSEIFAVLVELGCNVTAAVAWTHHKKAASIIYIEEGWNGGMIKDSKR 190
Query: 177 LSTIKELLFNVL---RGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRV 233
L+ ++E L NV+ G + K + G + ERRLHQ+M+ + DYE+ R
Sbjct: 191 LAHVQEQLENVVDAHNGQGETSSVKLTAPSAGWTHPERRLHQLMYANGDYEQC-----RC 245
Query: 234 EDKSSRPQTCSMLC 247
D S ++C M C
Sbjct: 246 HDDS---KSCKMSC 256
>gi|449451315|ref|XP_004143407.1| PREDICTED: uncharacterized protein LOC101215529 [Cucumis sativus]
Length = 476
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 112/254 (44%), Positives = 161/254 (63%), Gaps = 15/254 (5%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+D + LI R+ PPRV IDN+T D T++KVDS NKHGILL+++QVL D++LVI K+YI
Sbjct: 11 VDPQLELLIERIYPPRVCIDNDTFQDCTLVKVDSANKHGILLEMVQVLTDLDLVISKSYI 70
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL-ETDASFAP---SLRSSVGVMPTEEH 116
SSDGGWFMDVF+V D G K+ D+ +I YI+Q L + +P + ++ + + EH
Sbjct: 71 SSDGGWFMDVFHVTDQFGNKLTDESLIHYIKQALCASRKEGSPRKVRMCNTGKELLSPEH 130
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T+ E TG DRPGL SE+ AVL +L CN+ A WTH+ +AA+++++ + G IKD KR
Sbjct: 131 TAAEITGIDRPGLLSEIFAVLVELGCNITAAVAWTHHKKAASIIYIEEGWNGGMIKDSKR 190
Query: 177 LSTIKELLFNVL---RGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRV 233
L+ ++E L NV+ G + K + G + ERRLHQ+M+ + DYE+ R
Sbjct: 191 LAHVQEQLENVVDAHNGQGETSSVKLTAPSAGWTHPERRLHQLMYANGDYEQC-----RC 245
Query: 234 EDKSSRPQTCSMLC 247
D S ++C M C
Sbjct: 246 HDDS---KSCKMSC 256
>gi|357149509|ref|XP_003575136.1| PREDICTED: uncharacterized protein LOC100839017 [Brachypodium
distachyon]
Length = 450
Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 112/232 (48%), Positives = 157/232 (67%), Gaps = 14/232 (6%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY +R+NPPRV IDN+T ++ TV+KVDS+NK+GILL+V+QVL+D++L I KAYI
Sbjct: 5 FDPEYENFNQRINPPRVCIDNDTMSECTVVKVDSMNKNGILLEVVQVLSDLDLTILKAYI 64
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS-------SVGVMPT 113
+SDGGWFMDVF+V++ G+K+ D + I YI++ L ++ PS + SVG+
Sbjct: 65 TSDGGWFMDVFHVLNKQGQKVTDDKTIKYIEKALGPGSNL-PSAKKGGGSPGRSVGMHSI 123
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK- 172
+HT+IE G DR GL SE+ AVLA+L CNV+ AE+WTH R A VV+V D +TG I
Sbjct: 124 GDHTAIELKGPDRTGLLSEIFAVLAELQCNVLAAEVWTHRARVACVVYVNDVATGKPIDV 183
Query: 173 DPKRLSTIKELLFNVLRGY----DDFRKAKTSLSPPGIMNRERRLHQIMFDD 220
D +R+++I+ L NVLRG+ +D A T + G + +RRLHQ+M D
Sbjct: 184 DTRRMTSIEHRLRNVLRGHGGDDEDGTGAHTEFA-VGSTHVDRRLHQLMNAD 234
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 14/142 (9%)
Query: 26 DATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKI-RDK 84
D +V+ V ++ +L ++ L D+ V+ A +SSDG + + + DG+ + +D+
Sbjct: 263 DYSVVNVRCRDRSKLLFDIVCTLTDMQYVVSHAAVSSDGLYGVQELFIRRKDGRTLLKDE 322
Query: 85 EVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNV 144
E D + + L+ A S R S G ++E G DR GL SEV VL + V
Sbjct: 323 E--DKVVKCLQA----AISRRVSEGF-------TLEVCGRDRVGLLSEVTRVLREHGLTV 369
Query: 145 VNAEIWTHNDRAAAVVHVTDHS 166
A++ T ++A V +V D S
Sbjct: 370 TRADVATVGEQAMNVFYVRDAS 391
>gi|109676322|gb|ABG37643.1| unknown [Populus trichocarpa]
Length = 2224
Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 115/246 (46%), Positives = 152/246 (61%), Gaps = 22/246 (8%)
Query: 1 MDDEYAKLIRRMNPP--RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA 58
D ++ L R+ P RV IDN + D TV+KVDSVNK G+LL+V+QVL D+NL I K
Sbjct: 1747 FDPDFDSLPERIFGPTCRVCIDNESMEDCTVVKVDSVNKQGLLLEVVQVLTDLNLTIAKG 1806
Query: 59 YISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMP------ 112
YISSD GWFMDVF+V D GKK+RD+ VI+YIQQ + T PS ++
Sbjct: 1807 YISSDAGWFMDVFHVKDEHGKKLRDQNVINYIQQAIGTTRESTPSPPNARAYTNNIFEAD 1866
Query: 113 -TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 171
+ EHT+IE +GTDRPGLFSE+ A LADL CN+V W+HN R A V +++D S+ I
Sbjct: 1867 HSSEHTAIEMSGTDRPGLFSEISAALADLQCNIVEVHAWSHNARLACVAYISDPSSHTPI 1926
Query: 172 KDPKRLSTIKELLFNVLRGYD----------DFRKAKTS--LSPPG-IMNRERRLHQIMF 218
+DP RL++I++ L VLR + R+ KT L G + N ERRLHQ+M
Sbjct: 1927 EDPHRLASIEDHLTTVLRANTVRSAGEPSQINNREVKTGGFLGGEGTVSNVERRLHQLML 1986
Query: 219 DDRDYE 224
RD++
Sbjct: 1987 SVRDFD 1992
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 14/152 (9%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS--DGGWFMDVFNVI 74
V I+N + +++ ++ ++ ++ I LND+ VI A +SS DG F + F +
Sbjct: 2015 VSIENCDQKEYSIVNIECKDRRRLMFDTICTLNDMQYVIFHASVSSDHDGRAFQEYF-IR 2073
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG + + + + LE A R S GV+ ++ +R GL S++
Sbjct: 2074 HKDGYARNTESEKERVIKCLEA----AIERRVSEGVL-------LKLRAENRLGLLSDIT 2122
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
VL + VV A++ T ++A +V D S
Sbjct: 2123 RVLRENGLAVVRADVATEGEKAVNAFYVRDIS 2154
>gi|42761392|dbj|BAD11660.1| uridylyl transferase-like [Oryza sativa Japonica Group]
Length = 475
Score = 206 bits (525), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 118/239 (49%), Positives = 151/239 (63%), Gaps = 20/239 (8%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIK--------VDSVNKHGILLQVIQVLNDVNLV 54
DE+ KL+ RMNPPRV +DN + AT++K VDS NK+G LL+V+QVL ++ L
Sbjct: 12 DEFEKLVIRMNPPRVTVDNTSDMTATLVKASNTSLFLVDSANKYGTLLEVVQVLTELKLT 71
Query: 55 IKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDA-SF-APSLRSSVGVMP 112
IK+AYISSDG WFMDVF+V+D DG K+ D +VID I+ L + SF AP RS
Sbjct: 72 IKRAYISSDGEWFMDVFHVVDQDGNKLYDGQVIDRIELSLGAGSLSFRAPPERSVEVEAE 131
Query: 113 TEE-HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 171
T+IE G DRPGL SEV AVL DL CN+V++E+WTH+ R AA+VHVTD T AI
Sbjct: 132 AAAAQTAIELIGKDRPGLLSEVFAVLTDLKCNIVSSEVWTHDARMAALVHVTDADTLGAI 191
Query: 172 KDPKRLSTIKELLFNVLRG-----YDDFRKAKTSLSPP----GIMNRERRLHQIMFDDR 221
D RL T+K LL ++LRG D A+ ++ P + RRLHQ+M DDR
Sbjct: 192 DDQDRLDTVKRLLRHLLRGGGAGARDRKATARAAIPAPRRDGAAAHAPRRLHQMMHDDR 250
>gi|356541590|ref|XP_003539257.1| PREDICTED: uncharacterized protein LOC100811109 [Glycine max]
Length = 459
Score = 206 bits (524), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 112/255 (43%), Positives = 160/255 (62%), Gaps = 19/255 (7%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+D E L+ R++PPRV IDN++C D TV+KVDS N+ GILL+++QVL D++L+I K+YI
Sbjct: 9 IDREIESLLERIHPPRVCIDNDSCRDCTVVKVDSANRKGILLEMVQVLTDLDLIISKSYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL-----ETDASFAPSLRSSVGVMPTE- 114
SSDGGW MDVF+V D GKK+ D+ ++ +IQQ L + + S L S G +
Sbjct: 69 SSDGGWCMDVFHVTDEAGKKLTDETLMLHIQQELCATRSKGEISRDTELASQKGAQAQQQ 128
Query: 115 ----EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
E+T++E + TDR GL SE+ AVL +L +V +A WTHNDR A ++ + D S+
Sbjct: 129 NVAMENTALEMSVTDRAGLLSELSAVLVELGYSVTSATAWTHNDRVACIIFLEDASSPGP 188
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRK---AKTSLSPPGIMNRERRLHQIMFDDRDYE--- 224
I DPKRL ++E L NV+ + + + + + G + ERRLHQ+M+ DRDYE
Sbjct: 189 ISDPKRLGLVEEQLENVVAAHGETGQKNSVRVTTLGTGRTHTERRLHQLMYADRDYESCR 248
Query: 225 ---RVEKAVGRVEDK 236
R +VGR EDK
Sbjct: 249 ACDRTHVSVGRCEDK 263
>gi|168034813|ref|XP_001769906.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678812|gb|EDQ65266.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 449
Score = 206 bits (524), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 110/227 (48%), Positives = 148/227 (65%), Gaps = 6/227 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY + ++PP+V+IDN++ +AT++KV S NKHG LL+V+Q L D++L I KAYI
Sbjct: 10 FDPEYDTMSSIIDPPKVMIDNDSEKNATLVKVSSQNKHGTLLEVVQELMDMDLTISKAYI 69
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETD-----ASFAPSLRSSVGVMPTEE 115
+SDGGWFMDVF+V D G KIRD+++I IQ+ L A F SVG E
Sbjct: 70 TSDGGWFMDVFHVTDQKGLKIRDEKLIGNIQKALSLQKKKWTAEFQKCPGRSVGTQTISE 129
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
HT+IE TGTDRPGL SEV AVLA++ C V AE+WTHN R A V++VTD T I++ +
Sbjct: 130 HTAIELTGTDRPGLLSEVTAVLAEMSCRVNAAEVWTHNRRVACVMYVTDEDTLGPIENVR 189
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRD 222
+L I E L +++G DD + A+ S+ + ERRLHQ+M D D
Sbjct: 190 KLERILEKLNPIMQGCDDEKVAR-SVVAESFTHVERRLHQLMLADHD 235
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 71/155 (45%), Gaps = 12/155 (7%)
Query: 10 RRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMD 69
R+ P + ++ + + +V+KV +++ +L + L D+ V+ A I G + +
Sbjct: 248 RKQKNPNITVEIGSEKNYSVVKVQCLDRPKLLFDTVCTLTDLKYVVSHATIYPSGSYAVQ 307
Query: 70 VFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGL 129
+++ DG+ + D + +++ A RSS G+ + TDRPGL
Sbjct: 308 EYHIRSMDGRTLDDP-----AKAKVKRCLEAAIERRSSEGL-------RLYLCTTDRPGL 355
Query: 130 FSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+EV + +V AE+ T D+A +VTD
Sbjct: 356 LTEVTRTFRENGLSVTRAEVSTQGDKAVNTFYVTD 390
>gi|302812986|ref|XP_002988179.1| hypothetical protein SELMODRAFT_269367 [Selaginella moellendorffii]
gi|300143911|gb|EFJ10598.1| hypothetical protein SELMODRAFT_269367 [Selaginella moellendorffii]
Length = 482
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 112/244 (45%), Positives = 158/244 (64%), Gaps = 8/244 (3%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY L +NPPRVVI+N DATVIK+DSVN+HGILL+V+QVL D++L I KAY+
Sbjct: 13 FDPEYESLNASLNPPRVVIENAAFTDATVIKLDSVNRHGILLEVVQVLTDLDLFISKAYV 72
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSD GWFMDVF+V D DG KI D+EV+ +IQ+ + R S+G P +HT+IE
Sbjct: 73 SSDAGWFMDVFHVTDIDGNKITDEEVLKFIQEVCSAEG--GEITRVSLGTGP-HQHTAIE 129
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH-STGYAIKDPKRLST 179
+G +RPGL SEV + L+ ++CNV +A +WTHN R A ++ V + S+G I+D +L
Sbjct: 130 LSGPNRPGLLSEVFSTLSSMNCNVRSAAVWTHNLRVAGMIFVDNACSSGGPIEDCDKLKD 189
Query: 180 IKELLFNVLRGYDDFR---KAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV-GRVED 235
IK+ L V+R D R +T+ G+ + ERRLHQ+M D D+ + + GR+ D
Sbjct: 190 IKDRLCRVIRANDGERGGGAGRTADFFSGLTHMERRLHQMMSADEDHSGESRELEGRLGD 249
Query: 236 KSSR 239
++ +
Sbjct: 250 ETEQ 253
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 99/258 (38%), Gaps = 47/258 (18%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
D+ + + P V + N +V+ + ++ +L + L D++ +I A I
Sbjct: 249 DETEQRTVNGKGRPAVTVRNCVERGYSVVNIHCRDRSKLLFDTVCTLTDMDYMIFHATIL 308
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL--ETDASFAPSLRSSVGVMPTEEHTSI 119
S+G + F + DG + E + +RL F LR +
Sbjct: 309 SEGYFAYQEFYIRHTDGCTLETDEERQRLIKRLVAAIQRRFPEGLR-------------L 355
Query: 120 EFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVV---HVTDHSTGYAIKDPKR 176
E DR GL S+V V V A + T RA V +VTD ++G A+ D +
Sbjct: 356 ELCTYDRVGLLSDVTKVFHRHGLCVTRAHVST--TRAGTVANTFYVTDAASGDAV-DMRT 412
Query: 177 LSTIKELL----FNV--------LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
+ I+E L NV L G DD S SP + +LH E
Sbjct: 413 VEAIREELGQAMLNVRSAPVCPQLLGLDD------SPSPRFSLAAFFKLHS--------E 458
Query: 225 RVEKAVGRVEDKSSRPQT 242
R+ ++G + K S P T
Sbjct: 459 RILYSLGLITSKDSAPST 476
>gi|255548868|ref|XP_002515490.1| amino acid binding protein, putative [Ricinus communis]
gi|223545434|gb|EEF46939.1| amino acid binding protein, putative [Ricinus communis]
Length = 478
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/240 (47%), Positives = 150/240 (62%), Gaps = 18/240 (7%)
Query: 1 MDDEYAKLIRRMNPP--RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA 58
D ++ +L R+ P RV IDN + D +V+KVDSVNK G+LL+V+QVL D+NL I K+
Sbjct: 9 FDPDFDRLPERIYGPTCRVCIDNESMEDCSVVKVDSVNKQGLLLEVVQVLTDLNLTISKS 68
Query: 59 YISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL----ETDASFAPSLRSSVG-VMPT 113
YISSD GWFMDVF+V D GKK+ D+ VIDYI Q + ET + P +S V V
Sbjct: 69 YISSDAGWFMDVFHVKDERGKKLTDQHVIDYIHQAIGTTRETQSPATP--KSYVNDVFEG 126
Query: 114 E---EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
E EHT+IE +GTDRPGLFSE+ A L DLHCN+V A W+HN R A V +++D ST
Sbjct: 127 EHSSEHTAIEMSGTDRPGLFSEISAALVDLHCNIVEAHAWSHNARLACVAYISDQSTDTP 186
Query: 171 IKDPKRLSTIKELLFNVLRGY------DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
I DP RL+TI++ L V+R + + + N ERRLHQ+M RD++
Sbjct: 187 IDDPHRLATIEDHLTTVIRATGPQPNSQEVKTGGVVGGEGTVTNVERRLHQLMLSARDFD 246
>gi|449437402|ref|XP_004136481.1| PREDICTED: uncharacterized protein LOC101219701 [Cucumis sativus]
gi|449525060|ref|XP_004169538.1| PREDICTED: uncharacterized LOC101219701 [Cucumis sativus]
Length = 469
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 109/248 (43%), Positives = 153/248 (61%), Gaps = 16/248 (6%)
Query: 1 MDDEYAKLIRRMNPP--RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA 58
D ++ L R+N P RV IDN + D T++KVDS+NK G+LL+V+Q+L D+NL I K+
Sbjct: 9 FDPDFDTLPERINGPTCRVCIDNESMEDCTIVKVDSLNKQGLLLEVVQILTDLNLSISKS 68
Query: 59 YISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMP------ 112
YIS D GWFMDVF+V D + K+ D++VI+ IQQ + T S ++ V
Sbjct: 69 YISCDAGWFMDVFHVKDENSHKLTDQKVINSIQQAIGTTKGPDNSAKTRRYVNKLLNSDN 128
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ EHT+IE TGTDRPGLFSE+ A LADLHCNVV A W+HN R A + +++D ST I+
Sbjct: 129 SGEHTAIEMTGTDRPGLFSEISAALADLHCNVVEAHAWSHNARLACIAYISDQSTDSPIE 188
Query: 173 DPKRLSTIKELLFNVLRG--------YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
DP RL+ I+E L VLR + + + +S N ERRLHQ++ +DY+
Sbjct: 189 DPHRLANIEEHLSTVLRAATAPPIASWTHTLQQEVKISATITTNVERRLHQLLVSVKDYD 248
Query: 225 RVEKAVGR 232
+++ R
Sbjct: 249 WTSESISR 256
>gi|357163126|ref|XP_003579632.1| PREDICTED: uncharacterized protein LOC100841900 [Brachypodium
distachyon]
Length = 474
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 115/230 (50%), Positives = 155/230 (67%), Gaps = 12/230 (5%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEYAKL+R MNPPRV IDN T I+VDSVN HG LL ++QV+ D+NLV++KAY ++
Sbjct: 8 DEYAKLVRGMNPPRVEIDNEISKIGTFIQVDSVNTHGTLLALVQVITDLNLVVRKAYFTA 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLR-SSVGVMPTE------E 115
DG WFMDVF V D DG+K+ D+ ++YIQ LE+D + R +S ++P+E +
Sbjct: 68 DGDWFMDVFYVTDRDGEKVTDEATLNYIQTTLESDDCYYTEARDNSADIVPSESEEDSHQ 127
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK-DP 174
++SIE TGTDRPGL SEVCAVL+D+ C VV+A++WT N R AAVV V D +TG AI DP
Sbjct: 128 YSSIELTGTDRPGLLSEVCAVLSDVRCAVVSADLWTCNTRVAAVVQVADAATGVAISADP 187
Query: 175 KRLSTIKELLFNVL--RGYDDFRKAKTSLSPPGI--MNRERRLHQIMFDD 220
R++ I L ++L R + A + P + M++ERRLHQ+M D
Sbjct: 188 ARVAEISRRLAHLLRSRSWCHATVAASVAEEPSLVAMHKERRLHQLMAAD 237
>gi|302760087|ref|XP_002963466.1| hypothetical protein SELMODRAFT_405352 [Selaginella moellendorffii]
gi|300168734|gb|EFJ35337.1| hypothetical protein SELMODRAFT_405352 [Selaginella moellendorffii]
Length = 503
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 112/246 (45%), Positives = 153/246 (62%), Gaps = 24/246 (9%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D EY L +NPPRVVI+N ATVIK+DSVN+HGILL+V+QVL D++L I KAY+
Sbjct: 13 FDPEYESLNASLNPPRVVIENAAFTGATVIKLDSVNRHGILLEVVQVLTDLDLFISKAYV 72
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSL---------------- 104
SSD GWFMDVF+V D DG KI D+EV+ +IQ+ LE A+ P +
Sbjct: 73 SSDAGWFMDVFHVTDIDGNKITDEEVLKFIQESLEKKAAEMPWIGSKCSNPSKVCSAEGG 132
Query: 105 ---RSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH 161
R S+G P +HT+IE +G +RPGL SEV + L+ ++CNV +A +WTHN R A ++
Sbjct: 133 EITRVSLGTGP-HQHTAIELSGPNRPGLLSEVFSTLSSMNCNVRSAAVWTHNLRVAGMIF 191
Query: 162 VTDH-STGYAIKDPKRLSTIKELLFNVLRGYDDFR---KAKTSLSPPGIMNRERRLHQIM 217
V + S+G I+D +L IK+ L V+R D R +T+ G+ + ERRLHQ+M
Sbjct: 192 VDNACSSGGPIEDCDKLKDIKDRLCRVIRANDGERGGGAGRTAEFFSGLTHMERRLHQMM 251
Query: 218 FDDRDY 223
D D+
Sbjct: 252 SADEDH 257
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 101/264 (38%), Gaps = 59/264 (22%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
D+ + + P V I N +V+ + ++ +L + L D++ +I A I
Sbjct: 270 DETEQRTVNGKGRPTVTIRNCVERGYSVVNIHCQDRSKLLFDTVCTLTDMDYMIFHATIL 329
Query: 62 SDGGWFMDVFNVIDCDGKKIRD--------KEVIDYIQQRLETDASFAPSLRSSVGVMPT 113
S+G + F + DG + K ++ IQ+R F LR
Sbjct: 330 SEGYFAYQEFYIRHTDGCTLETDDERQRLIKRLVAAIQRR------FPEGLR-------- 375
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVV---HVTDHSTGYA 170
+E DR GL S+V V V A I T RA V +VTD ++G A
Sbjct: 376 -----LELCTYDRVGLLSDVTKVFHRHGLCVTRAYIST--TRAGTVANTFYVTDAASGDA 428
Query: 171 IKDPKRLSTIKELL----FNV--------LRGYDDFRKAKTSLSPPGIMNRERRLHQIMF 218
+ D + + I+E L NV L G DD S SP + +LH
Sbjct: 429 V-DMRTVEAIREELGQAMLNVRSAPVCPQLLGLDD------SPSPRFSLAAFFKLHS--- 478
Query: 219 DDRDYERVEKAVGRVEDKSSRPQT 242
ER+ ++G + K S P T
Sbjct: 479 -----ERILYSLGLITSKDSAPST 497
>gi|168045560|ref|XP_001775245.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673458|gb|EDQ59981.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 454
Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 146/229 (63%), Gaps = 9/229 (3%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D +Y NPPRV I+N +ATV++V S N+HGILL V+QVL D++LVI K+ +
Sbjct: 9 FDPDYETTSSSFNPPRVTIENEAYENATVVQVHSANRHGILLNVVQVLTDLDLVITKSDM 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ-------RLETDASFAPSLRSSVGVMPT 113
SDGGWF+DVF+V+D G K+RD+ V+DYIQ+ + + S A LR S G + T
Sbjct: 69 FSDGGWFLDVFHVVDDSGNKVRDQSVLDYIQKVCGGHSIPTQLEQSSADLLRRSSG-LTT 127
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
+HT +E TG DRPGL SE+ AVL + CNV AE+WTHN R A V++ T+ +TG I+
Sbjct: 128 ADHTVVELTGPDRPGLLSEISAVLTSMECNVNAAEVWTHNHRVACVIYFTNTNTGGPIES 187
Query: 174 PKRLSTIKELLFNVLRGYDDFRKAKTSLS-PPGIMNRERRLHQIMFDDR 221
L IKE L VL+G D + A+ + I + ERRLHQ+M++DR
Sbjct: 188 QSLLELIKEQLSRVLKGDHDEQHARCKIEYASEITHVERRLHQLMYEDR 236
>gi|357482521|ref|XP_003611547.1| ACT domain-containing protein [Medicago truncatula]
gi|355512882|gb|AES94505.1| ACT domain-containing protein [Medicago truncatula]
Length = 486
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/241 (43%), Positives = 153/241 (63%), Gaps = 19/241 (7%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+D E L R++P RV IDNNTC D TV+KVDS NK+GILL+++QVL D++L+I K+YI
Sbjct: 9 VDREIETLTERLHPARVCIDNNTCKDCTVVKVDSANKYGILLEMVQVLTDLDLIISKSYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ--------------QRLETDASFAPSLRS 106
SSDGGWFMDVF+V D GKK+ D+ ++ I+ + L+ A ++ S S
Sbjct: 69 SSDGGWFMDVFHVTDQAGKKLTDRNLMHQIEKELCATRAKEDIDDEELQGCAEYSQSKYS 128
Query: 107 SVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
V + E+T++E +G DRPGL SE+ AVL ++ CNV +A WTHN R A +++V + S
Sbjct: 129 KQIV--STENTALEMSGMDRPGLLSEISAVLVNMSCNVTSATAWTHNGRVACILYVEEAS 186
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGY---DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDY 223
I+DP+RL+ +KE L +V+ + + + G + ERRLHQ+M+ DRDY
Sbjct: 187 KPGPIRDPRRLAQVKEQLESVVVAHCEKGERNNVRLRNFAAGRTHTERRLHQLMYADRDY 246
Query: 224 E 224
E
Sbjct: 247 E 247
>gi|297799732|ref|XP_002867750.1| hypothetical protein ARALYDRAFT_492590 [Arabidopsis lyrata subsp.
lyrata]
gi|297313586|gb|EFH44009.1| hypothetical protein ARALYDRAFT_492590 [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 110/225 (48%), Positives = 150/225 (66%), Gaps = 10/225 (4%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
+EY KL+ RMN PRVVIDN C ++TV+K+DS GILL+ +Q+L D+NL IKKAYISS
Sbjct: 8 NEYEKLVVRMNMPRVVIDNGVCPNSTVVKIDSARSPGILLESVQLLTDMNLWIKKAYISS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG W MDVF+V D +G K+ D+ +I YI++ +ET S G+ T++E T
Sbjct: 68 DGKWNMDVFHVSDLNGNKLTDENLIRYIEKSIET--SHYCKTEGYTGL------TALELT 119
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI-KDPKRLSTIK 181
GTDR GL SEV AVLADL C+VV A+ WTHN R A++++V D ++G I D R+ ++
Sbjct: 120 GTDRVGLLSEVFAVLADLECDVVEAKAWTHNGRIASMIYVKDGNSGTPIDGDSDRVQRVE 179
Query: 182 ELLFNVLRGYDDFRK-AKTSLSPPGIMNRERRLHQIMFDDRDYER 225
L N+L+ D ++ +T +S G + ERRLHQ MF DRDYE+
Sbjct: 180 GQLRNLLKADDGYQNDTRTCVSYGGNTHMERRLHQRMFMDRDYEK 224
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 84/194 (43%), Gaps = 18/194 (9%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MD +Y K P V + N +V+ + ++ +L V+ L D+ ++ A I
Sbjct: 218 MDRDYEKKFDIEKSPIVSVQNLPKRGYSVVNLQCKDRLKLLFDVVCTLTDMAYIVFHAAI 277
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
+ G F V DG + + +QRL A R+ GV +E
Sbjct: 278 RTVGETAFLEFYVRHSDGHPVSSEPE----RQRLIQCLQAAIERRTVKGV-------RLE 326
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
DRPGL +EV VL + N+ AEI T + A V +VTD + G I DP+ + +I
Sbjct: 327 LCTADRPGLLAEVTRVLRENGLNIARAEISTKDGVARNVFYVTD-ANGNLI-DPEIIQSI 384
Query: 181 KELLFNVLRGYDDF 194
+E + G DD
Sbjct: 385 REKI-----GIDDL 393
>gi|356497013|ref|XP_003517359.1| PREDICTED: uncharacterized protein LOC100781435 [Glycine max]
Length = 477
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/236 (44%), Positives = 158/236 (66%), Gaps = 14/236 (5%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+D E LI R++PPRV I+N++C D TV+KVDS N+ GILL+++QVL D++L+I K+YI
Sbjct: 9 IDREIESLIERIHPPRVCIENDSCPDCTVVKVDSANRKGILLEMVQVLTDLDLIISKSYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL--------ETDASFAPSLRSSVGVMP 112
SSDGGW MDVF+V D GKK+ D+ ++ +IQQ + +T+ + ++ +P
Sbjct: 69 SSDGGWCMDVFHVTDEAGKKLTDETLMLHIQQVIVSKREISRDTEMVSQKAPQAQQQNVP 128
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+E+T++E + TDRPGL SE+ AVL +L C+V +A WTHNDR A ++ + D S+ I
Sbjct: 129 -KENTALEMSVTDRPGLLSELSAVLVELGCSVTSAMAWTHNDRVACIIFLEDASSPGPIS 187
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAK----TSLSPPGIMNRERRLHQIMFDDRDYE 224
DP+RL ++E L NV+ + + + K T+L G + ERRLHQ+M+ DRDYE
Sbjct: 188 DPERLGLVEEQLENVVAAHGETGQKKSVRVTTLG-TGRTHTERRLHQLMYADRDYE 242
>gi|356554239|ref|XP_003545456.1| PREDICTED: uncharacterized protein LOC100820595 [Glycine max]
Length = 483
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/261 (44%), Positives = 154/261 (59%), Gaps = 37/261 (14%)
Query: 1 MDDEYAKLIRRMNPP--RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA 58
D E+ L R++ P RV +DN + TV+KVDSVNK G+LL+V+Q+L D+NL I K+
Sbjct: 9 FDPEFDTLPERIHGPPCRVCVDNESMEGCTVVKVDSVNKQGLLLEVVQILTDMNLQICKS 68
Query: 59 YISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVM------- 111
+ISSD GWFMDVF+V D +G K+ D++VI+ IQQ + + +PS + S
Sbjct: 69 FISSDAGWFMDVFHVRDENGNKLTDQKVINDIQQAIGRSRASSPSQQHSNNNNNNSVFTT 128
Query: 112 -----------------PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND 154
P ++HT+IE TG DRPGLFSE+ A LADLHCN+V A W+HN
Sbjct: 129 MTNYKTYSKRLLPLLPNPNDQHTAIEMTGADRPGLFSEISAALADLHCNIVEAHAWSHNA 188
Query: 155 RAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLR--------GYDDFRKAKTS--LSPP 204
R A V +++D ST AI DP RL++I++ L VLR G + KTS L
Sbjct: 189 RLACVAYISDQSTDTAIDDPSRLASIEDHLTTVLRATTNPNGGGGANHPDVKTSELLGGE 248
Query: 205 GIMNR-ERRLHQIMFDDRDYE 224
G M ERRLHQ+M RD+E
Sbjct: 249 GQMTTVERRLHQLMLSVRDFE 269
>gi|20466646|gb|AAM20640.1| translation factor EF-1 alpha-like protein [Arabidopsis thaliana]
Length = 449
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 110/225 (48%), Positives = 150/225 (66%), Gaps = 10/225 (4%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
+EY KL+ RMN PRVVIDN C ++TV+K+DS GILL+ +Q+L D+NL IKKAYISS
Sbjct: 8 NEYEKLVVRMNMPRVVIDNGVCPNSTVVKIDSARSPGILLESVQLLTDMNLWIKKAYISS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG W MDVF+V D +G K+ D+ +I YI++ +ET S G+ T++E T
Sbjct: 68 DGKWNMDVFHVSDLNGDKLTDENLIRYIEKSIET--SHYCKTEGYTGL------TALELT 119
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI-KDPKRLSTIK 181
GTDR GL SEV AVLADL C+VV A+ WTHN R A++++V D ++G I D R+ ++
Sbjct: 120 GTDRVGLLSEVFAVLADLECDVVEAKAWTHNGRIASMIYVKDGNSGTPIDGDSDRVQRVE 179
Query: 182 ELLFNVLRGYDDFRK-AKTSLSPPGIMNRERRLHQIMFDDRDYER 225
L N+L+ D ++ +T +S G + ERRLHQ MF DRDYE+
Sbjct: 180 GQLRNLLKADDGYQNDTRTCVSYGGNTHMERRLHQRMFMDRDYEK 224
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 84/194 (43%), Gaps = 18/194 (9%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MD +Y K P V + N +V+ + ++ +L V+ L D+ ++ A I
Sbjct: 218 MDRDYEKKFDIEKSPIVSVQNLPKRGYSVVNLQCKDRMKLLFDVVCTLTDMAYIVFHAAI 277
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
+ G F V DG + + +QRL A R+ GV +E
Sbjct: 278 RTVGETAFLEFYVRHSDGHPVSSEPE----RQRLIQCLQAAIERRTVKGV-------RLE 326
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
DRPGL +EV +L + N+ AEI T + A V +VTD + G I DP+ + +I
Sbjct: 327 LCTADRPGLLAEVTRILRENGLNIARAEISTKDSIARNVFYVTD-ANGNLI-DPEIIKSI 384
Query: 181 KELLFNVLRGYDDF 194
+E + G DD
Sbjct: 385 REKI-----GIDDL 393
>gi|168024574|ref|XP_001764811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684105|gb|EDQ70510.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 448
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 110/235 (46%), Positives = 147/235 (62%), Gaps = 11/235 (4%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D +Y +PPRV I+N+T + TV++V S ++HGILL V+QVL D++LVI K+ +
Sbjct: 9 FDPDYETASSSFDPPRVTIENDTSDNVTVVQVHSADRHGILLNVVQVLTDLDLVIVKSDM 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ----RLETDASFAPSLRSSVGVMPTEEH 116
SD GWF DVF+V+D G K+RD+ V+D+IQ R + S A LR S G + +H
Sbjct: 69 FSDKGWFFDVFHVVDHSGNKVRDRSVLDHIQNSLGYRTRREQSSADLLRRSSG-LSVSDH 127
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +E TG DRPGL SE+ A+L L CNV AE+WTHN R A V+++TD +TG I+ R
Sbjct: 128 TVVELTGPDRPGLLSEISAILTQLDCNVNAAEVWTHNLRVACVIYLTDTTTGGPIQTQSR 187
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLS-PPGIMNRERRLHQIMFDDR-----DYER 225
L IKE L VLRG D A+ + I + ERRLHQ+M+DDR DY R
Sbjct: 188 LELIKEQLSKVLRGAHDENLARWKIEYATEITHVERRLHQLMYDDRRHAGQDYSR 242
>gi|22328873|ref|NP_194009.2| ACT domain repeat 7 protein [Arabidopsis thaliana]
gi|22138104|gb|AAM93432.1| ACR7 [Arabidopsis thaliana]
gi|115646767|gb|ABJ17111.1| At4g22780 [Arabidopsis thaliana]
gi|332659257|gb|AEE84657.1| ACT domain repeat 7 protein [Arabidopsis thaliana]
Length = 449
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 110/225 (48%), Positives = 150/225 (66%), Gaps = 10/225 (4%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
+EY KL+ RMN PRVVIDN C ++TV+K+DS GILL+ +Q+L D+NL IKKAYISS
Sbjct: 8 NEYEKLVVRMNMPRVVIDNGVCPNSTVVKIDSARSPGILLESVQLLTDMNLWIKKAYISS 67
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG W MDVF+V D +G K+ D+ +I YI++ +ET S G+ T++E T
Sbjct: 68 DGKWNMDVFHVSDLNGDKLTDENLIRYIEKSIET--SHYCKTEGYTGL------TALELT 119
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI-KDPKRLSTIK 181
GTDR GL SEV AVLADL C+VV A+ WTHN R A++++V D ++G I D R+ ++
Sbjct: 120 GTDRVGLLSEVFAVLADLECDVVEAKAWTHNGRIASMIYVKDGNSGTPIDGDSDRVQRVE 179
Query: 182 ELLFNVLRGYDDFRK-AKTSLSPPGIMNRERRLHQIMFDDRDYER 225
L N+L+ D ++ +T +S G + ERRLHQ MF DRDYE+
Sbjct: 180 GQLRNLLKADDGYQNDTRTCVSYGGNTHMERRLHQRMFMDRDYEK 224
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 84/194 (43%), Gaps = 18/194 (9%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MD +Y K P V + N +V+ + ++ +L V+ L D+ ++ A I
Sbjct: 218 MDRDYEKKFDIEKSPIVSVQNLPKRGYSVVNLQCKDRMKLLFDVVCTLTDMAYIVFHAAI 277
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
+ G F V DG + + +QRL A R+ GV +E
Sbjct: 278 RTVGETAFLEFYVRHSDGHPVSSEPE----RQRLIQCLQAAIERRTVKGV-------RLE 326
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
DRPGL +EV +L + N+ AEI T + A V +VTD + G I DP+ + +I
Sbjct: 327 LCTADRPGLLAEVTRILRENGLNIARAEISTKDSIARNVFYVTD-ANGNLI-DPEIIKSI 384
Query: 181 KELLFNVLRGYDDF 194
+E + G DD
Sbjct: 385 REKI-----GIDDL 393
>gi|296082058|emb|CBI21063.3| unnamed protein product [Vitis vinifera]
Length = 495
Score = 199 bits (506), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 108/236 (45%), Positives = 143/236 (60%), Gaps = 12/236 (5%)
Query: 1 MDDEYAKLIRRMNPP--RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA 58
D E+ +L R+ P RV IDN + D T++KV+S+NK GILL+V++VL D+NL I K+
Sbjct: 12 FDPEFDELPERIFGPTCRVCIDNESLEDCTLVKVNSINKQGILLEVVKVLTDMNLTISKS 71
Query: 59 YISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVM---PTEE 115
YISSD GWFM VF+V D G K+ D+ VI+YIQQ + T SL V+ P E
Sbjct: 72 YISSDAGWFMFVFHVRDEHGNKLTDQRVINYIQQAIGTTREIPNSLTYVNNVIESEPASE 131
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
HT+IE +G DRPGLFSE+ A LADL N+V A WTHN+R A V ++TD ST I+DP
Sbjct: 132 HTAIEMSGADRPGLFSEISAALADLQVNIVEAHAWTHNERLACVAYITDQSTDSRIEDPH 191
Query: 176 RLSTIKELLFNVLRG-------YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
RL+ I+ L VL + + + A + ERRLHQ+M D+E
Sbjct: 192 RLAKIENHLATVLGAANISRANHQEVKGADLHVGEATTTCAERRLHQLMLSVEDFE 247
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 81/200 (40%), Gaps = 27/200 (13%)
Query: 28 TVIKVDSVNKHG-------------ILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
T++ ++S N+ G ++ V+ + D+ +I +S GG+ M + +
Sbjct: 273 TIVSIESCNERGYSIVSIECKDRLRLMFDVVCTITDMQYLIFHGSTASHGGYAMQEYFIR 332
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG + + +++ + LE A R GV +E +R GL S++
Sbjct: 333 HIDGCTVNSEGEKEHVVKCLEA----AIERRVCEGV-------RLELCANNRLGLLSDIT 381
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG---YAIKDPKRLSTIKELLFNVLRGY 191
VL + VV A++ T ++A +V D S +PK+ E + +
Sbjct: 382 RVLRENGLAVVRADVETQGEKAVNAFYVKDLSGNDVDTEFTEPKKKEKFIESVKKEMGPI 441
Query: 192 DDFRKAKTSLSPPGIMNRER 211
D K + + SP +R R
Sbjct: 442 DLAVKKEITSSPSSPDHRPR 461
>gi|359476144|ref|XP_003631797.1| PREDICTED: uncharacterized protein LOC100852414 [Vitis vinifera]
Length = 481
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 108/236 (45%), Positives = 143/236 (60%), Gaps = 12/236 (5%)
Query: 1 MDDEYAKLIRRMNPP--RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA 58
D E+ +L R+ P RV IDN + D T++KV+S+NK GILL+V++VL D+NL I K+
Sbjct: 9 FDPEFDELPERIFGPTCRVCIDNESLEDCTLVKVNSINKQGILLEVVKVLTDMNLTISKS 68
Query: 59 YISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVM---PTEE 115
YISSD GWFM VF+V D G K+ D+ VI+YIQQ + T SL V+ P E
Sbjct: 69 YISSDAGWFMFVFHVRDEHGNKLTDQRVINYIQQAIGTTREIPNSLTYVNNVIESEPASE 128
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
HT+IE +G DRPGLFSE+ A LADL N+V A WTHN+R A V ++TD ST I+DP
Sbjct: 129 HTAIEMSGADRPGLFSEISAALADLQVNIVEAHAWTHNERLACVAYITDQSTDSRIEDPH 188
Query: 176 RLSTIKELLFNVLRG-------YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
RL+ I+ L VL + + + A + ERRLHQ+M D+E
Sbjct: 189 RLAKIENHLATVLGAANISRANHQEVKGADLHVGEATTTCAERRLHQLMLSVEDFE 244
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 81/200 (40%), Gaps = 27/200 (13%)
Query: 28 TVIKVDSVNKHG-------------ILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
T++ ++S N+ G ++ V+ + D+ +I +S GG+ M + +
Sbjct: 270 TIVSIESCNERGYSIVSIECKDRLRLMFDVVCTITDMQYLIFHGSTASHGGYAMQEYFIR 329
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG + + +++ + LE A R GV +E +R GL S++
Sbjct: 330 HIDGCTVNSEGEKEHVVKCLEA----AIERRVCEGV-------RLELCANNRLGLLSDIT 378
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG---YAIKDPKRLSTIKELLFNVLRGY 191
VL + VV A++ T ++A +V D S +PK+ E + +
Sbjct: 379 RVLRENGLAVVRADVETQGEKAVNAFYVKDLSGNDVDTEFTEPKKKEKFIESVKKEMGPI 438
Query: 192 DDFRKAKTSLSPPGIMNRER 211
D K + + SP +R R
Sbjct: 439 DLAVKKEITSSPSSPDHRPR 458
>gi|125582506|gb|EAZ23437.1| hypothetical protein OsJ_07127 [Oryza sativa Japonica Group]
Length = 610
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 104/227 (45%), Positives = 146/227 (64%), Gaps = 17/227 (7%)
Query: 8 LIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF 67
L++ + RV IDN+TC+D T++KVDS+NK+GILL+V+QVL+D++L I KAYI+SDGGWF
Sbjct: 141 LLKEESTERVCIDNSTCSDCTLVKVDSMNKNGILLEVVQVLSDLDLAISKAYITSDGGWF 200
Query: 68 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS------SVGVMPTEEHTSIEF 121
MDVF+V+D G+K+ D++ I +I++ L D++ + SVG+ +HT+IE
Sbjct: 201 MDVFHVVDKQGQKVTDEKTIKHIEKALGPDSNLLGGAKGGSSPVRSVGMHSIGDHTAIEL 260
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
G DR GL SEV AVLA+L CNV+ AE+WTH R A VV+V D ++G A+ DP RLS I+
Sbjct: 261 KGPDRTGLLSEVFAVLAELGCNVLAAEVWTHRARVACVVYVNDVASGQAVGDPCRLSRIE 320
Query: 182 ELLFNVLRGYDDFRKAKTSLSPPGI-----------MNRERRLHQIM 217
L VLRG+ P + +RRLHQ+M
Sbjct: 321 HRLRLVLRGHAGGDDGDGDDGPAHANFFSSGGAGSNTHVDRRLHQLM 367
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 17/173 (9%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V +++ D +V+ V ++ +L ++ L D++ V+ A +SSDG + + +
Sbjct: 399 PVVTVEHCEEKDYSVVNVKCRDRSKLLFDIVCTLTDMHYVVSHASVSSDGIYGIQELYIR 458
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG+ ++ E I+ LE A S R S G ++E G DR GL S+V
Sbjct: 459 RKDGRTLQKDEAGRVIKC-LEA----AISRRVSEGF-------TLELCGRDRVGLLSDVT 506
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 187
VL + V A++ T +A V +V D S +P + TI+ L V
Sbjct: 507 RVLREHGLTVTRADVTTVGGQAINVFYVRDAS-----GEPVDMKTIEGLRVQV 554
>gi|125539879|gb|EAY86274.1| hypothetical protein OsI_07644 [Oryza sativa Indica Group]
Length = 608
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 104/227 (45%), Positives = 146/227 (64%), Gaps = 17/227 (7%)
Query: 8 LIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF 67
L++ + RV IDN+TC+D T++KVDS+NK+GILL+V+QVL+D++L I KAYI+SDGGWF
Sbjct: 141 LLKEESTERVCIDNSTCSDFTLVKVDSMNKNGILLEVVQVLSDLDLAISKAYITSDGGWF 200
Query: 68 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS------SVGVMPTEEHTSIEF 121
MDVF+V+D G+K+ D++ I +I++ L D++ + SVG+ +HT+IE
Sbjct: 201 MDVFHVVDKQGQKVTDEKTIKHIEKALGPDSNLLGGAKGGSSPVRSVGMHSIGDHTAIEL 260
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
G DR GL SEV AVLA+L CNV+ AE+WTH R A VV+V D ++G A+ DP RLS I+
Sbjct: 261 KGPDRTGLLSEVFAVLAELGCNVLAAEVWTHRARVACVVYVNDVASGQAVGDPCRLSRIE 320
Query: 182 ELLFNVLRGYDDFRKAKTSLSPPGI-----------MNRERRLHQIM 217
L VLRG+ P + +RRLHQ+M
Sbjct: 321 HRLRLVLRGHAGGDDGDGDDGPAHANFFSSGGAGSNTHVDRRLHQLM 367
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 17/173 (9%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V +++ D +V+ V ++ +L ++ L D++ V+ A +SSDG + + +
Sbjct: 399 PVVTVEHCEEKDYSVVNVKCRDRSKLLFDIVCTLTDMHYVVSHASVSSDGIYGIQELYIR 458
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG+ ++ E I+ LE A S R S G ++E G DR GL S+V
Sbjct: 459 RKDGRTLQKDEAGRVIKC-LEA----AISRRVSEGF-------TLELCGRDRVGLLSDVT 506
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 187
VL + V A++ T +A V +V D S +P + TI+ L V
Sbjct: 507 RVLREHGLTVTRADVTTVGGQAINVFYVRDAS-----GEPVDMKTIEGLRVQV 554
>gi|115477499|ref|NP_001062345.1| Os08g0533300 [Oryza sativa Japonica Group]
gi|113624314|dbj|BAF24259.1| Os08g0533300 [Oryza sativa Japonica Group]
Length = 498
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 118/262 (45%), Positives = 151/262 (57%), Gaps = 43/262 (16%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIK------------------------------- 31
DE+ KL+ RMNPPRV +DN + AT++K
Sbjct: 12 DEFEKLVIRMNPPRVTVDNTSDMTATLVKASNTSLFLVLDNSCRLIQSISWEEFFSQTGE 71
Query: 32 VDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
VDS NK+G LL+V+QVL ++ L IK+AYISSDG WFMDVF+V+D DG K+ D +VID I+
Sbjct: 72 VDSANKYGTLLEVVQVLTELKLTIKRAYISSDGEWFMDVFHVVDQDGNKLYDGQVIDRIE 131
Query: 92 QRLETDA-SF-APSLRSSVGVMPTEE-HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAE 148
L + SF AP RS T+IE G DRPGL SEV AVL DL CN+V++E
Sbjct: 132 LSLGAGSLSFRAPPERSVEVEAEAAAAQTAIELIGKDRPGLLSEVFAVLTDLKCNIVSSE 191
Query: 149 IWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRG-----YDDFRKAKTSLSP 203
+WTH+ R AA+VHVTD T AI D RL T+K LL ++LRG D A+ ++
Sbjct: 192 VWTHDARMAALVHVTDADTLGAIDDQDRLDTVKRLLRHLLRGGGAGARDRKATARAAIPA 251
Query: 204 P----GIMNRERRLHQIMFDDR 221
P + RRLHQ+M DDR
Sbjct: 252 PRRDGAAAHAPRRLHQMMHDDR 273
>gi|15239390|ref|NP_197914.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|332006043|gb|AED93426.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 500
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 109/234 (46%), Positives = 145/234 (61%), Gaps = 23/234 (9%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P RV IDN++ D TV+KV+S NK G+LL+V+Q+L D+NL+I K+YISSDGGWFMDVF+V
Sbjct: 24 PCRVYIDNDSIQDCTVVKVNSENKQGLLLEVVQILTDMNLIITKSYISSDGGWFMDVFHV 83
Query: 74 IDCDGKKIRDKEVIDYIQQ-----RLETD---ASFAPSLRSSVGVMPTEEHTSIEFTGTD 125
D G K+ DK VI++I+ R E+D AS A + + EHT+IE TGTD
Sbjct: 84 KDEHGNKLTDKSVINHIKHAIGTSRRESDFIKASEANNNSLEPQLADHGEHTAIEMTGTD 143
Query: 126 RPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLF 185
RPGLFSE+ A ADLHCNV+ A W+HN R A + +V+D +T I DP RL++I++ L
Sbjct: 144 RPGLFSEIFAAFADLHCNVMEAHAWSHNARLACIAYVSDDNTHTPIDDPSRLASIEDHLS 203
Query: 186 NVLRGYDDFRKAKTSLS-------------PPGIMNR--ERRLHQIMFDDRDYE 224
V+R D T + G MN ERRLHQ+M RD++
Sbjct: 204 TVIRATADPASNSTHVGHKENETDGFLAGQGKGCMNSNMERRLHQLMLSVRDFD 257
>gi|168033466|ref|XP_001769236.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679501|gb|EDQ65948.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 446
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 106/229 (46%), Positives = 140/229 (61%), Gaps = 6/229 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D +Y N PRV ++ +AT++KV+S N+HGILL V+QVL D++L I K+ I
Sbjct: 9 FDPDYETTCSSFNSPRVTVETEASENATIVKVNSANRHGILLNVVQVLTDLDLTITKSDI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ----RLETDASFAPSLRSSVGVMPTEEH 116
D GWFMDVF+V+D +G K DK+ D+I R + A SLR S G + +H
Sbjct: 69 FHDLGWFMDVFHVVDSNGNKALDKQTCDHIMNSLGYRTRREQFSADSLRRSTG-LTVADH 127
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE TG DRPGL SE+ AVL L CNV AE+WTHN RAA++V+ TD STG I + +
Sbjct: 128 TVIELTGPDRPGLLSELSAVLTRLECNVNAAEVWTHNLRAASIVYFTDSSTGRPITNQSK 187
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLS-PPGIMNRERRLHQIMFDDRDYE 224
L IKE L V++G D A+ + I + ERRLHQ+M+DDR E
Sbjct: 188 LDYIKEQLSRVMKGDHDEEVARCKIEYATEITHVERRLHQLMYDDRANE 236
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 12/139 (8%)
Query: 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVI 87
+V+ + ++ +L ++ L D+ VI A I+ G F + +G +
Sbjct: 260 SVVSIHCKDRPKLLFDIVCTLTDMQYVIYHALINFPGSETSQEFFIRHVNGCTLDTAA-- 317
Query: 88 DYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNA 147
+Q L+ A S R+S G+ +E DR GL S+V + + +V A
Sbjct: 318 ---EQHLKACLEAAISRRTSEGL-------RLELCMNDRVGLLSDVTRIFRENGLSVARA 367
Query: 148 EIWTHNDRAAAVVHVTDHS 166
+I T +D+A V +V D S
Sbjct: 368 DITTRHDKAINVFYVVDAS 386
>gi|2827555|emb|CAA16563.1| Translation factor EF-1 alpha - like protein [Arabidopsis thaliana]
gi|7269125|emb|CAB79233.1| Translation factor EF-1 alpha-like protein [Arabidopsis thaliana]
Length = 458
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 111/234 (47%), Positives = 150/234 (64%), Gaps = 19/234 (8%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKV---------DSVNKHGILLQVIQVLNDVNL 53
+EY KL+ RMN PRVVIDN C ++TV+KV DS GILL+ +Q+L D+NL
Sbjct: 8 NEYEKLVVRMNMPRVVIDNGVCPNSTVVKVFTLTQPSSIDSARSPGILLESVQLLTDMNL 67
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPT 113
IKKAYISSDG W MDVF+V D +G K+ D+ +I YI++ +ET S G+
Sbjct: 68 WIKKAYISSDGKWNMDVFHVSDLNGDKLTDENLIRYIEKSIET--SHYCKTEGYTGL--- 122
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI-K 172
T++E TGTDR GL SEV AVLADL C+VV A+ WTHN R A++++V D ++G I
Sbjct: 123 ---TALELTGTDRVGLLSEVFAVLADLECDVVEAKAWTHNGRIASMIYVKDGNSGTPIDG 179
Query: 173 DPKRLSTIKELLFNVLRGYDDFRK-AKTSLSPPGIMNRERRLHQIMFDDRDYER 225
D R+ ++ L N+L+ D ++ +T +S G + ERRLHQ MF DRDYE+
Sbjct: 180 DSDRVQRVEGQLRNLLKADDGYQNDTRTCVSYGGNTHMERRLHQRMFMDRDYEK 233
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 84/194 (43%), Gaps = 18/194 (9%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MD +Y K P V + N +V+ + ++ +L V+ L D+ ++ A I
Sbjct: 227 MDRDYEKKFDIEKSPIVSVQNLPKRGYSVVNLQCKDRMKLLFDVVCTLTDMAYIVFHAAI 286
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
+ G F V DG + + +QRL A R+ GV +E
Sbjct: 287 RTVGETAFLEFYVRHSDGHPVSSEPE----RQRLIQCLQAAIERRTVKGV-------RLE 335
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
DRPGL +EV +L + N+ AEI T + A V +VTD + G I DP+ + +I
Sbjct: 336 LCTADRPGLLAEVTRILRENGLNIARAEISTKDSIARNVFYVTD-ANGNLI-DPEIIKSI 393
Query: 181 KELLFNVLRGYDDF 194
+E + G DD
Sbjct: 394 REKI-----GIDDL 402
>gi|297812735|ref|XP_002874251.1| ACT domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297320088|gb|EFH50510.1| ACT domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 502
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/253 (43%), Positives = 151/253 (59%), Gaps = 29/253 (11%)
Query: 1 MDDEYAKLIRRM-NPP-RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA 58
D ++ L R+ PP RV IDN++ D TV+KV+S NK G+LL+V+Q+L D+NL+I K+
Sbjct: 9 FDPDFDNLGERIYGPPCRVYIDNDSIIDCTVVKVNSENKQGLLLEVVQILTDMNLIITKS 68
Query: 59 YISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVG--------- 109
YISSDGGWFMDVF+V D G K+ DK VI++I+ + T + +++S
Sbjct: 69 YISSDGGWFMDVFHVKDEYGNKLTDKSVINHIKHAIGTSRRESDFIKASEAHNNPNNNSL 128
Query: 110 ---VMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
+ EHT+IE TGTDRPGLFSE+ A ADLHCNV+ A W+HN R A + +V+D +
Sbjct: 129 ESPLSDHGEHTAIEMTGTDRPGLFSEIFAAFADLHCNVMEAHAWSHNARLACIAYVSDDN 188
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLS-------------PPGIMNR--ER 211
T I DP RL++I++ L V+R D T + G MN ER
Sbjct: 189 THTPIDDPSRLASIEDHLSTVIRATSDPASNSTHVGHKENETDGFLAGQGKGCMNSNVER 248
Query: 212 RLHQIMFDDRDYE 224
RLHQ+M RD++
Sbjct: 249 RLHQLMLSVRDFD 261
>gi|357476531|ref|XP_003608551.1| hypothetical protein MTR_4g097380 [Medicago truncatula]
gi|355509606|gb|AES90748.1| hypothetical protein MTR_4g097380 [Medicago truncatula]
Length = 375
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/249 (40%), Positives = 150/249 (60%), Gaps = 10/249 (4%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+D E L R++PPRV IDN++C + TV+K+D NKHGILL+++Q L D++L+I K+YI
Sbjct: 28 IDREIESLKERIHPPRVCIDNDSCRNCTVVKIDRANKHGILLEMVQALTDLDLIISKSYI 87
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVM-----PTEE 115
SSDGGW MDVF+V D G K+ DK ++++I+Q L + + SS V P E
Sbjct: 88 SSDGGWLMDVFHVKDQIGNKLTDKSLVNHIEQILCECTAKSNGETSSETVQHCCKGPQEA 147
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
+ +IE GTDRPGLFSE+ VL DL N+++A+ WTHND+ +++ D S I + +
Sbjct: 148 NVAIEVIGTDRPGLFSEISVVLMDLGFNIISAKAWTHNDKVVCIIYPEDASRPGPINERE 207
Query: 176 RLSTIKELLFNVL-----RGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 230
RL+ + + + NV+ +G D R S G + ERRLHQ+M+ DYE
Sbjct: 208 RLAQVVDQIRNVIEANEGKGDKDMRSVVLKSSTTGHSHTERRLHQMMYAASDYESCHACH 267
Query: 231 GRVEDKSSR 239
G + + R
Sbjct: 268 GDNDSEHKR 276
>gi|356565477|ref|XP_003550966.1| PREDICTED: uncharacterized protein LOC100797191 [Glycine max]
Length = 440
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/239 (43%), Positives = 146/239 (61%), Gaps = 12/239 (5%)
Query: 4 EYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD 63
E LI R+ PPRV IDN++ + TV+K+DS N+HGILL++ QVL D++LVI K+YISSD
Sbjct: 12 EIESLIERIYPPRVCIDNDSSRECTVVKIDSANRHGILLEMAQVLTDLDLVISKSYISSD 71
Query: 64 GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE-----HTS 118
GGW MDVF+V D DG K+ D ++ YIQQ L S + S + + E + +
Sbjct: 72 GGWLMDVFHVTDQDGNKLTDVGLVHYIQQALCESRSSNKEISSDIELTSCNEPPRVVNLA 131
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
IE T TD+ G+FSE+ AVL L NV +A WTHNDR A ++H+ D + I + +RL+
Sbjct: 132 IELTTTDKHGMFSEISAVLLGLGFNVTSATAWTHNDRVACIIHLEDANKLGPI-NAERLA 190
Query: 179 TIKELLFNVLR------GYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVG 231
++ L NV++ G DD + + G + ERRLHQ+M+ D DYER+ G
Sbjct: 191 QVQAQLQNVVKARDGKNGEDDRVRLRLRSFGGGRNHTERRLHQMMYADGDYERLRACHG 249
>gi|297794201|ref|XP_002864985.1| hypothetical protein ARALYDRAFT_919932 [Arabidopsis lyrata subsp.
lyrata]
gi|297310820|gb|EFH41244.1| hypothetical protein ARALYDRAFT_919932 [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/239 (42%), Positives = 148/239 (61%), Gaps = 15/239 (6%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+D E L+ R+NPPRV +DN++ + T+IKVDS NK+GILL ++QVL D++LVI K YI
Sbjct: 10 IDSEIESLVERINPPRVCVDNDSDPECTLIKVDSANKYGILLDMVQVLADLDLVISKCYI 69
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETD--ASFAPSLRSSVGVMPTE---- 114
SSDG WFMDVF+V D G K+ D+ +I YIQQ + + ++S++ +
Sbjct: 70 SSDGEWFMDVFHVTDQLGNKLTDRSLILYIQQAICSSRTGGITKEMQSNLKREVQQRHVS 129
Query: 115 -EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
EHT+ E TG +RPGL SE+ AVL+D+ C+V A WTH++RAA V+++ D G I D
Sbjct: 130 TEHTAFEITGINRPGLLSEISAVLSDIGCHVTAAVAWTHHERAAMVIYLEDGFNGGPIID 189
Query: 174 PKRLSTIKELLFNVLRGYDDF--------RKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
P R + +K+ L V+ + R + +P G + ERRLH++M+ + DYE
Sbjct: 190 PIRKAQVKDHLDTVMEAHHRVGDVSHVVVRVVEAKGAPVGWAHTERRLHELMYGEGDYE 248
>gi|15239186|ref|NP_201390.1| ACT domain repeat 1 [Arabidopsis thaliana]
gi|13430688|gb|AAK25966.1|AF360256_1 putative uridylyl transferases [Arabidopsis thaliana]
gi|9759573|dbj|BAB11136.1| uridylyl transferases-like [Arabidopsis thaliana]
gi|14532892|gb|AAK64128.1| putative uridylyl transferases [Arabidopsis thaliana]
gi|22138094|gb|AAM93427.1| ACR1 [Arabidopsis thaliana]
gi|332010736|gb|AED98119.1| ACT domain repeat 1 [Arabidopsis thaliana]
Length = 477
Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 101/239 (42%), Positives = 147/239 (61%), Gaps = 15/239 (6%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+D E L+ R+NPPRV +DN++ + T+IKVDS NK+GILL ++QVL D++LVI K YI
Sbjct: 10 IDSEIESLVERINPPRVCVDNDSDPECTLIKVDSANKYGILLDMVQVLADLDLVISKCYI 69
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETD--ASFAPSLRSSVGVMPTE---- 114
SSDG WFMDVF+V D G K+ D+ +I YIQQ + + ++S++ +
Sbjct: 70 SSDGEWFMDVFHVTDQLGNKLTDRSLILYIQQAICSSRTGGITKEMQSNLKREVQQRHVS 129
Query: 115 -EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
EHT+ E TG +RPGL SE+ AVL+D+ C+V A WTH++RAA V+++ D G I D
Sbjct: 130 TEHTAFEITGINRPGLLSEISAVLSDIGCHVTAAVAWTHHERAAMVIYLEDGFNGGPIID 189
Query: 174 PKRLSTIKELLFNVLRGYD--------DFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
P R + +K+ L V+ + R + P G + ERRLH++M+ + DYE
Sbjct: 190 PIRKAQVKDHLDTVMEAHHIVGDVSHVVVRVVEAKGVPVGWAHTERRLHELMYGEGDYE 248
>gi|356514354|ref|XP_003525871.1| PREDICTED: uncharacterized protein LOC100783892 [Glycine max]
Length = 481
Score = 186 bits (472), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 101/235 (42%), Positives = 147/235 (62%), Gaps = 11/235 (4%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+D E LI R++PPRV IDN++ D TV+K+DS N+HGILL+++QVL D++ VI K+YI
Sbjct: 9 IDREIESLIERIHPPRVCIDNDSSRDCTVVKIDSANRHGILLEMVQVLTDLDPVISKSYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE----- 115
SSDGGW MDVF+V D DG K+ D+ ++ YIQQ L S + + S + + E
Sbjct: 69 SSDGGWLMDVFHVTDHDGNKLTDRGLVHYIQQTLCEARSNSKEISSDIELTSCNEPPRLV 128
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
+ +IE T ++ GLFSE+ AVL L NV +A WTHNDR A ++H+ D I + +
Sbjct: 129 NLAIELTTANQHGLFSEMSAVLLGLGFNVTSATAWTHNDRVACIIHLEDAKKLGPI-NAE 187
Query: 176 RLSTIKELLFNVLR-----GYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYER 225
RL+ ++ L NV++ G ++ + + G + ERRLHQ+M+ D DYER
Sbjct: 188 RLAQVQPELRNVVKARDRNGEEERVRLRLRSFGAGRNHTERRLHQMMYADGDYER 242
>gi|168012723|ref|XP_001759051.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689750|gb|EDQ76120.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 447
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 105/246 (42%), Positives = 139/246 (56%), Gaps = 14/246 (5%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D +Y NPP+V ++ +ATV+KV S N+HGILL V+QVL D++L I K+ I
Sbjct: 9 FDPDYETTFSSFNPPKVTVETEANENATVVKVYSANRHGILLNVVQVLTDLDLTITKSDI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLET----DASFAPSLRSSVGVMPTEEH 116
D GWFMDVF+V+D +G K DK D+I + T A+ LR S G + EH
Sbjct: 69 FHDLGWFMDVFHVVDSNGNKTLDKRTCDHILKVRHTLPHSSAAAIYHLRRSTG-LTCSEH 127
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE TG DRPGL SE+ AVL L CNV AE+WTHN R A++++ D +TG I +
Sbjct: 128 TVIELTGPDRPGLLSEISAVLTRLECNVNGAEVWTHNQRVASIIYFNDINTGRPITAQSK 187
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLS-PPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 235
L I+ L V++G D A+ + I + ERRLHQ+M+DDR V V
Sbjct: 188 LDHIRGQLSKVMKGDHDEEVARCKIEYATEITHVERRLHQLMYDDR--------VNEVPH 239
Query: 236 KSSRPQ 241
S PQ
Sbjct: 240 VSGNPQ 245
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 12/139 (8%)
Query: 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVI 87
+V+ + ++ +L ++ L D+ VI A I+S G F + +G + D
Sbjct: 260 SVVSIQCKDRSKLLFDIVCTLTDMQYVIYHALINSPGPETSQEFFIRHVNGCTL-DTADA 318
Query: 88 DYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNA 147
++++ LE A + R+S G+ +E +DR GL S+V + + +V A
Sbjct: 319 EHLKVCLEA----AINRRTSEGL-------RLELCMSDRIGLLSDVTRLFRENGLSVARA 367
Query: 148 EIWTHNDRAAAVVHVTDHS 166
+I T +D+A V +V D S
Sbjct: 368 DITTRDDKAVNVFYVVDAS 386
>gi|41469088|gb|AAS07062.1| putative ACT domain containing protein, ACR4, with alternative
splicing forms [Oryza sativa Japonica Group]
gi|108708792|gb|ABF96587.1| ACT domain containing protein, putative, expressed [Oryza sativa
Japonica Group]
Length = 374
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/165 (55%), Positives = 116/165 (70%), Gaps = 5/165 (3%)
Query: 68 MDVFNVIDCDGKKIRDKEVID----YIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTG 123
M VFNV D +G+KI D+ V+D YI + L D+ F PS R SVGV P+ ++T IE TG
Sbjct: 1 MSVFNVTDQNGQKIMDESVLDEIVKYIHKCLGADSCFLPSRRRSVGVEPSSDYTLIELTG 60
Query: 124 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 183
TDRPGL SEV AVL +L CNVVNAE+WTHN RAAAV+ V D TG AI D +RL+ IKE
Sbjct: 61 TDRPGLLSEVSAVLTNLECNVVNAEVWTHNKRAAAVMQVMDRKTGLAISDTQRLARIKER 120
Query: 184 LFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEK 228
L V +G + + KT+++ GI + ERRLHQ+M +DRDYER +K
Sbjct: 121 LSYVFKGSNRSQDTKTTVT-MGITHTERRLHQLMLEDRDYERYDK 164
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 87/205 (42%), Gaps = 16/205 (7%)
Query: 3 DEYAKLIRRMNP-PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
+ Y K +NP P V + N D +V+ + ++ +L + L D+ V+ +
Sbjct: 160 ERYDKDRTNVNPTPVVSVVNWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVD 219
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEF 121
S+G + + DG + + + Q LE A R S G+ +E
Sbjct: 220 SEGPEAYQEYYIRHIDGSPVNSEAERQRVIQCLEA----AIERRVSEGL-------KLEL 268
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
+ DR GL S+V + + V AE+ T D+A +V D + A+ D K L I+
Sbjct: 269 STGDRVGLLSDVTRIFRENGLTVTRAEVSTRGDKAVNTFYVRDAAGSSAV-DLKTLEAIR 327
Query: 182 ELLFNV---LRGYDDFRKAKTSLSP 203
+ + ++G+ D RK+ SP
Sbjct: 328 QEIGQTVLQVKGHPDHRKSPPQESP 352
>gi|242080357|ref|XP_002444947.1| hypothetical protein SORBIDRAFT_07g001810 [Sorghum bicolor]
gi|241941297|gb|EES14442.1| hypothetical protein SORBIDRAFT_07g001810 [Sorghum bicolor]
Length = 443
Score = 177 bits (448), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 104/222 (46%), Positives = 141/222 (63%), Gaps = 9/222 (4%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMN PRVVIDN C AT+++VDS K G+LL+ +QVL D++L I KAYISS
Sbjct: 5 DEYEKLVIRMNMPRVVIDNAICPTATLVQVDSARKRGLLLEAVQVLADLDLSINKAYISS 64
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D G+K+ D VI YIQQ L T P+ +++ E T++E T
Sbjct: 65 DGRWFMDVFHVTDRLGRKLTDDSVITYIQQSLGT--WNEPARPAAL-----EGLTALELT 117
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHV--TDHSTGYAIKDPKRLSTI 180
G DR GL SEV AVLAD+ C+VV+A WTH R A VV + + ++G + D R++ I
Sbjct: 118 GPDRTGLLSEVFAVLADMQCSVVDARAWTHRGRLACVVFLRGEELASGASADDDDRVARI 177
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRD 222
L ++LRG + A ++ G+ + +R LHQ+M D D
Sbjct: 178 LARLGHLLRGDGEAPGAVAAVPAAGVAHADRCLHQLMAADLD 219
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 13/155 (8%)
Query: 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVI 87
+V+ V ++ +L V+ L+D++ V+ + + G F + DG IR +
Sbjct: 244 SVVTVLCRDRPKLLFDVVCTLHDMDYVVFHGTVDTAGDRARQEFYIRRADGSPIRSEAER 303
Query: 88 DYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNA 147
+ + Q L+ A RS GV +E DRPGL SEV + VV A
Sbjct: 304 ERLNQCLQA----AIERRSLEGV-------RLELCTPDRPGLLSEVTRTFRENGLLVVQA 352
Query: 148 EIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
E+ T D A+ V +VTD + A D + ++E
Sbjct: 353 EVSTKGDLASNVFYVTDAAGKAA--DQSAIDAVRE 385
>gi|413941729|gb|AFW74378.1| hypothetical protein ZEAMMB73_033208 [Zea mays]
Length = 443
Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 101/219 (46%), Positives = 128/219 (58%), Gaps = 9/219 (4%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMN PRVVIDN C AT+++VDS K G+LL+ +QVL D++L I KAYISS
Sbjct: 5 DEYEKLVIRMNTPRVVIDNAVCPTATLVQVDSARKRGLLLEAVQVLADLDLSINKAYISS 64
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D G+K+ D VI YIQQ L T A + P E T++E T
Sbjct: 65 DGRWFMDVFHVTDRLGRKLTDASVIAYIQQSLGTWVEPAAA-------APPEGLTALELT 117
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
G R GL SEV AVLAD+ C V +A W H R A V H+ R+S I
Sbjct: 118 GPGRAGLLSEVFAVLADMQCGVADARAWAHRGRLACVAHLRADDP-ADGDGDGRVSRILA 176
Query: 183 LLFNVLRG-YDDFRKAKTSLSPPGIMNRERRLHQIMFDD 220
L ++LRG A ++ G+ + +RRLHQ+M D
Sbjct: 177 RLSHLLRGDGVVAPGAVAAVPASGVAHADRRLHQLMSAD 215
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 58/137 (42%), Gaps = 11/137 (8%)
Query: 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVI 87
+V+ V ++ +L V L+D++ V+ + + G F + DG IR +
Sbjct: 244 SVVTVQCGDRPKLLFDVACTLHDMDYVVFHGTVDTAAGRARQEFYIRRADGSPIRSEAER 303
Query: 88 DYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNA 147
+ + L+ A RS GV +E DR GL SEV + V A
Sbjct: 304 EMLTHHLQA----AIERRSLEGV-------RLELCAPDRAGLLSEVTRTFRENGLLVAQA 352
Query: 148 EIWTHNDRAAAVVHVTD 164
E+ T D+A V +VTD
Sbjct: 353 EVSTKGDQACNVFYVTD 369
>gi|115474541|ref|NP_001060867.1| Os08g0118100 [Oryza sativa Japonica Group]
gi|42407901|dbj|BAD09041.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|50725644|dbj|BAD33111.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|113622836|dbj|BAF22781.1| Os08g0118100 [Oryza sativa Japonica Group]
Length = 441
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/224 (46%), Positives = 135/224 (60%), Gaps = 15/224 (6%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMN PRVVIDN C+ AT+++VDS K G+LL+ +QVL D++L I KAYISS
Sbjct: 5 DEYEKLVIRMNTPRVVIDNAVCSTATLVQVDSARKTGVLLEAVQVLADLDLSINKAYISS 64
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLET-DASFAPSLRSSVGVMPTEEHTSIEF 121
DG WFMDVF+V D G K+ D VI YI+Q L T + P+ E T++E
Sbjct: 65 DGRWFMDVFHVTDRLGCKLTDDSVITYIEQSLGTWNGPARPA--------ALEGLTALEL 116
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
TG DR GL SEV AVLAD+ C VV A WTH R +V + D D +R++ I+
Sbjct: 117 TGADRTGLISEVFAVLADMDCAVVEARSWTHRGRLGCLVFLRDEEA-----DTERMARIE 171
Query: 182 ELLFNVLRG-YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
L ++LRG A ++ + + ERRLHQ+M DRD E
Sbjct: 172 ARLGHLLRGDSTGAGGAVAAVPAAAVAHAERRLHQLMSADRDQE 215
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 12/145 (8%)
Query: 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVI 87
+V+ V ++ +L V+ L D++ V+ I + G F + DG I +
Sbjct: 241 SVVTVQCRDRPKLLFDVVCTLTDMDYVVFHGTIDTTGDQAHQEFYIRHADGSPISSEAER 300
Query: 88 DYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNA 147
+ Q L+ DA SL E +E DRP L S+V + V A
Sbjct: 301 HRVSQCLQ-DAIERRSL----------EGVRLELCTPDRPALLSDVTRTFRENGLLVAQA 349
Query: 148 EIWTHNDRAAAVVHVTDHSTGYAIK 172
E+ T D A+ V +VTD + G+A++
Sbjct: 350 EVSTKGDMASNVFYVTD-AAGHAVE 373
>gi|218200397|gb|EEC82824.1| hypothetical protein OsI_27619 [Oryza sativa Indica Group]
Length = 433
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/224 (46%), Positives = 135/224 (60%), Gaps = 15/224 (6%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMN PRVVIDN C+ AT+++VDS K G+LL+ +QVL D++L I KAYISS
Sbjct: 5 DEYEKLVIRMNTPRVVIDNAVCSTATLVQVDSARKTGVLLEAVQVLADLDLSINKAYISS 64
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLET-DASFAPSLRSSVGVMPTEEHTSIEF 121
DG WFMDVF+V D G K+ D VI YI+Q L T + P+ E T++E
Sbjct: 65 DGRWFMDVFHVTDRLGCKLTDDSVITYIEQSLGTWNGPARPA--------ALEGLTALEL 116
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
TG DR GL SEV AVLAD+ C VV A WTH R +V + D D +R++ I+
Sbjct: 117 TGADRTGLISEVFAVLADMDCAVVEARSWTHRGRLGCLVFLRDEEA-----DTERMARIE 171
Query: 182 ELLFNVLRG-YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
L ++LRG A ++ + + ERRLHQ+M DRD E
Sbjct: 172 ARLGHLLRGDSTGAGGAVAAVPAAAVAHAERRLHQLMSADRDQE 215
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 12/145 (8%)
Query: 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVI 87
+V+ V ++ +L V+ L D++ V+ I + G F + DG I +
Sbjct: 241 SVVTVQCRDRPKLLFDVVCTLTDMDYVVFHGTIDTTGDQAHQEFYIRHADGSPISSEAER 300
Query: 88 DYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNA 147
+ Q L+ +A RS GV +E DRP L S+V + V A
Sbjct: 301 HRVSQCLQ----YAIERRSLEGV-------RLELCTPDRPALLSDVTRTFRENGLLVAQA 349
Query: 148 EIWTHNDRAAAVVHVTDHSTGYAIK 172
E+ T D A+ V +VTD + G+A++
Sbjct: 350 EVSTKGDMASNVFYVTD-AAGHAVE 373
>gi|222639814|gb|EEE67946.1| hypothetical protein OsJ_25838 [Oryza sativa Japonica Group]
Length = 433
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/223 (46%), Positives = 137/223 (61%), Gaps = 13/223 (5%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMN PRVVIDN C+ AT+++VDS K G+LL+ +QVL D++L I KAYISS
Sbjct: 5 DEYEKLVIRMNTPRVVIDNAVCSTATLVQVDSARKTGVLLEAVQVLADLDLSINKAYISS 64
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D G K+ D VI YI+Q L T P+ +++ E T++E T
Sbjct: 65 DGRWFMDVFHVTDRLGCKLTDDSVITYIEQSLGT--WNGPARPAAL-----EGLTALELT 117
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
G DR GL SEV AVLAD+ C VV A WTH R +V + D D +R++ I+
Sbjct: 118 GADRTGLISEVFAVLADMDCAVVEARSWTHRGRLGCLVFLRDEEA-----DTERMARIEA 172
Query: 183 LLFNVLRG-YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
L ++LRG A ++ + + ERRLHQ+M DRD E
Sbjct: 173 RLGHLLRGDSTGAGGAVAAVPAAAVAHAERRLHQLMSADRDQE 215
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 12/145 (8%)
Query: 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVI 87
+V+ V ++ +L V+ L D++ V+ I + G F + DG I +
Sbjct: 241 SVVTVQCRDRPKLLFDVVCTLTDMDYVVFHGTIDTTGDQAHQEFYIRHADGSPISSEAER 300
Query: 88 DYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNA 147
+ Q L+ A RS GV +E DRP L S+V + V A
Sbjct: 301 HRVSQCLQD----AIERRSLEGV-------RLELCTPDRPALLSDVTRTFRENGLLVAQA 349
Query: 148 EIWTHNDRAAAVVHVTDHSTGYAIK 172
E+ T D A+ V +VTD + G+A++
Sbjct: 350 EVSTKGDMASNVFYVTD-AAGHAVE 373
>gi|414872600|tpg|DAA51157.1| TPA: hypothetical protein ZEAMMB73_416104 [Zea mays]
Length = 390
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/238 (42%), Positives = 147/238 (61%), Gaps = 15/238 (6%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+ ++ L+ R P VV+DN T D T++KVDSVN+ G+LL+++Q+L D++LVI K+YI
Sbjct: 9 FEPDFDPLLDRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVISKSYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL----ETDASFAPSLRSSVG--VMPTE 114
SSDGGW MDVF+V D G+K+ D + ++IQ+ L +P + +G V P
Sbjct: 69 SSDGGWLMDVFHVTDQIGRKLTDPSLPEFIQRALVPTHRPGNGPSPRFTTCLGNVVGPGG 128
Query: 115 EHTS----IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
S +EFT DRPGL S + +VLAD C+V + + WTHN RAA V++VTD + G A
Sbjct: 129 PDVSGCAALEFTVHDRPGLLSSITSVLADNGCHVASGQAWTHNGRAAGVLYVTDTAGGAA 188
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAK--TSLSPP--GIMNRERRLHQIMFDDRDYE 224
+ P R + I+ L+ V+ ++ + +S P G ++ ERRLHQ+M DDRDYE
Sbjct: 189 LL-PGRCARIERLVNAVVDARENVTGERHWVRVSEPAQGRVHTERRLHQLMHDDRDYE 245
>gi|108707164|gb|ABF94959.1| ACT domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|125860406|dbj|BAF46926.1| ACT-domain repeat protein 9 [Oryza sativa Japonica Group]
gi|215769363|dbj|BAH01592.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 442
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/218 (45%), Positives = 131/218 (60%), Gaps = 7/218 (3%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG 64
Y +R MN PRVV+D+ CA AT+++V S KHG+LL+ + L++ + ++K YISSD
Sbjct: 10 YELFVRHMNTPRVVVDSGVCATATLVQVHSARKHGMLLEAVAALSEHGVCVRKGYISSDD 69
Query: 65 G-WFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTG 123
G WFMDVF+V D G+K+ D D + RLE+ S R++ G E T +E G
Sbjct: 70 GRWFMDVFHVTDAAGRKVADA---DALLARLESSLSAEALPRAAAGGPAAEGLTLLELVG 126
Query: 124 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 183
DRPGL SEV AVL DL CN V A WTH R AA+V V D TG I D R+ I+
Sbjct: 127 ADRPGLLSEVFAVLHDLRCNTVEARAWTHGGRVAALVFVRDEETGAPIDDAARVRRIESR 186
Query: 184 LFNVLRGYDDFRKAKTSLS-PPGIMNRERRLHQIMFDD 220
L +VLRG R A+T L+ P N +RRLHQ++ +D
Sbjct: 187 LRHVLRG--GARCARTVLADPSAAGNLDRRLHQLLKED 222
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 71/161 (44%), Gaps = 24/161 (14%)
Query: 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRD---- 83
+V+ V ++ +L V+ L D++ V+ +DG F + DG+ I
Sbjct: 247 SVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRSDGRPISSEAER 306
Query: 84 KEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCN 143
+ VI +Q +E AS E +E +DR GL + V V + +
Sbjct: 307 QHVIRCLQAAIERRAS---------------EGVRLELRISDRRGLLAYVTRVFRENGLS 351
Query: 144 VVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
V +AEI T +D A V HVTD + A DPK TI E++
Sbjct: 352 VTHAEITTRDDMAMNVFHVTDVAGRPA--DPK---TIDEVI 387
>gi|413921426|gb|AFW61358.1| ACR8 [Zea mays]
Length = 432
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 101/220 (45%), Positives = 134/220 (60%), Gaps = 13/220 (5%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMN PRVVIDN C AT+++VDS K G+LL+ +QVL D++L I KAYISS
Sbjct: 5 DEYEKLVVRMNTPRVVIDNAVCPTATLVQVDSARKRGLLLEAVQVLADLDLSINKAYISS 64
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D G+K+ D VI YIQQ L T P+ +++ E T++E T
Sbjct: 65 DGRWFMDVFHVTDRLGRKLTDDSVITYIQQSLGTWNE--PARPAAL-----EGLTALELT 117
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
G DR GL SEV AVLADL C VV+A WTH R A V + D R++ I
Sbjct: 118 GPDRTGLLSEVFAVLADLQCGVVDARAWTHRGRLACVAFLRGEG------DADRVARILA 171
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRD 222
L +++RG + A ++ + + +RRLHQ+M D +
Sbjct: 172 RLGHLVRGDGEAPGAVAAVPAAAVAHVDRRLHQLMAADHN 211
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 12/138 (8%)
Query: 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG-WFMDVFNVIDCDGKKIRDKEV 86
+V+ V ++ +L V+ L+ ++ V+ + + G F + DG IR +
Sbjct: 233 SVVTVQCRDRPKLLFDVVCALHCLDYVVFHGTVDTAAGDRARQEFYICSADGSPIRSEAE 292
Query: 87 IDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVN 146
+ + Q L+ A RS GV +E DRPGL SEV + V +
Sbjct: 293 RERLAQCLQA----AIDRRSLEGV-------RLELCTPDRPGLLSEVTRTFRENGLLVAH 341
Query: 147 AEIWTHNDRAAAVVHVTD 164
AE+ T A+ V +VTD
Sbjct: 342 AEVSTKGGLASNVFYVTD 359
>gi|108707165|gb|ABF94960.1| ACT domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 538
Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 99/218 (45%), Positives = 131/218 (60%), Gaps = 7/218 (3%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG 64
Y +R MN PRVV+D+ CA AT+++V S KHG+LL+ + L++ + ++K YISSD
Sbjct: 10 YELFVRHMNTPRVVVDSGVCATATLVQVHSARKHGMLLEAVAALSEHGVCVRKGYISSDD 69
Query: 65 G-WFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTG 123
G WFMDVF+V D G+K+ D D + RLE+ S R++ G E T +E G
Sbjct: 70 GRWFMDVFHVTDAAGRKVADA---DALLARLESSLSAEALPRAAAGGPAAEGLTLLELVG 126
Query: 124 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 183
DRPGL SEV AVL DL CN V A WTH R AA+V V D TG I D R+ I+
Sbjct: 127 ADRPGLLSEVFAVLHDLRCNTVEARAWTHGGRVAALVFVRDEETGAPIDDAARVRRIESR 186
Query: 184 LFNVLRGYDDFRKAKTSLS-PPGIMNRERRLHQIMFDD 220
L +VLRG R A+T L+ P N +RRLHQ++ +D
Sbjct: 187 LRHVLRG--GARCARTVLADPSAAGNLDRRLHQLLKED 222
>gi|1532164|gb|AAB07874.1| similar to uridylyl transferase, Swiss-Prot Accession Number
P43919; localized according to blastn similarity to EST
sequences; therefore, the coding span corresponds only
to an area of similarity since the initation codon and
stop codon could not be precisely determined, partial
[Arabidopsis thaliana]
Length = 211
Score = 170 bits (430), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 92/149 (61%), Positives = 101/149 (67%), Gaps = 30/149 (20%)
Query: 70 VFNVIDCDGKKIRDKEVIDYIQ-----------------------------QRLETDAS- 99
VF VID DG KIRD +V+DYIQ QR+E++A
Sbjct: 1 VFKVIDQDGNKIRDTQVLDYIQKVSNVFHHFFSFIFNRFFSLCKTFVEFIAQRIESNAGW 60
Query: 100 FAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAV 159
F P LRSSVGVMPT+E+TSIE GTDRPGL SEV AVL DLHCNVVNAEIWTHN RAAAV
Sbjct: 61 FIPPLRSSVGVMPTDEYTSIELAGTDRPGLLSEVSAVLTDLHCNVVNAEIWTHNTRAAAV 120
Query: 160 VHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+HVTD+ST AI DP RLSTIKELL NVL
Sbjct: 121 IHVTDNSTHSAITDPIRLSTIKELLCNVL 149
>gi|357116994|ref|XP_003560261.1| PREDICTED: uncharacterized protein LOC100826395 [Brachypodium
distachyon]
Length = 506
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/242 (40%), Positives = 141/242 (58%), Gaps = 20/242 (8%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+ ++ ++ R P VV+DN T D T++KVDSVN+ G+LL+++Q+L D++LVI K+YI
Sbjct: 9 FEPDFDPVLDRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVISKSYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL-----ETDASFAPSLRSSVG--VMP- 112
SSDGGW MDVF+V D G+K+ D + +IQQ L +P + +G V P
Sbjct: 69 SSDGGWLMDVFHVTDQIGRKLTDPSLPGFIQQALVPFQRRPGHGPSPKFTTCLGNVVGPG 128
Query: 113 ---TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
+ S+EFT DRPGL S + VL D C+V + + WTH+ RAA V++VT T
Sbjct: 129 GPDVSDCASLEFTVPDRPGLLSSITQVLVDQGCHVASGQSWTHSGRAAGVLYVT--MTAA 186
Query: 170 AIKDP---KRLSTIKELLFNVLRGYDDFRKAK----TSLSPPGIMNRERRLHQIMFDDRD 222
A P R + I+ L+ V+ + A+ S PG ++ ERRLHQ+M DDRD
Sbjct: 187 AEAQPPHQSRWAHIERLVSAVVDARESVSGARRWVCMSAPAPGRVHTERRLHQLMHDDRD 246
Query: 223 YE 224
YE
Sbjct: 247 YE 248
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 64/153 (41%), Gaps = 11/153 (7%)
Query: 16 RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVID 75
RV IDN V+K+ S ++ +L + L D+ V+ A + S G + + +
Sbjct: 289 RVTIDNWEERGYAVVKMTSRDRPKLLFDTVCGLTDMQYVVFHATVGSQGPLAIQEYYIRH 348
Query: 76 CDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCA 135
DG+ + + +Q++ A R+S GV +E DR GL S+
Sbjct: 349 KDGRTVDS----NAERQKVSRCLVAAVERRASHGV-------RVEVRAADRSGLLSDFTR 397
Query: 136 VLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+L + +++ E+ D A ++ S G
Sbjct: 398 ILREHGLSLLRVELKRQKDEAVGTFYLVTDSGG 430
>gi|226508650|ref|NP_001145757.1| uncharacterized protein LOC100279264 [Zea mays]
gi|219884321|gb|ACL52535.1| unknown [Zea mays]
gi|413933158|gb|AFW67709.1| hypothetical protein ZEAMMB73_506779 [Zea mays]
Length = 494
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/238 (40%), Positives = 143/238 (60%), Gaps = 21/238 (8%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+ ++ L+ R+ P VV+DN T D T++KVDSVN+ G+LL ++Q+L D++LVI K+YI
Sbjct: 9 FEPDFDPLLDRLGTPGVVVDNETREDCTLVKVDSVNRDGVLLDMVQLLTDLDLVISKSYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL----ETDASFAPSLRSSVG--VMPTE 114
SDGGW MDVF+V D G+K+ D + ++IQ+ L T +P + +G V P
Sbjct: 69 CSDGGWLMDVFHVTDRTGRKLTDPSLPEFIQRALVRFHRTVNCASPRFTTCLGNVVGPAG 128
Query: 115 EHTS----IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
S +EFT DRPGL S + +VLAD C+V + + WTHN RAA V++VT
Sbjct: 129 PDVSGCAALEFTVNDRPGLLSSITSVLADSGCHVASGQAWTHNGRAAGVLYVTP------ 182
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAK--TSLSPP--GIMNRERRLHQIMFDDRDYE 224
P R + ++ L+ V+ ++ + T +S P G ++ ERRLHQ+M DDRDYE
Sbjct: 183 -PLPSRWARVERLVEAVVGARENVAGERHWTRVSGPARGRVHTERRLHQLMRDDRDYE 239
>gi|226510421|ref|NP_001151985.1| ACR8 [Zea mays]
gi|195651513|gb|ACG45224.1| ACR8 [Zea mays]
Length = 433
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/220 (45%), Positives = 132/220 (60%), Gaps = 13/220 (5%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
DEY KL+ RMN PRVVIDN C AT+++VDS K G+LL+ +QVL D++L I KAYISS
Sbjct: 5 DEYEKLVIRMNTPRVVIDNAVCPTATLVQVDSARKRGLLLEAVQVLADLDLSINKAYISS 64
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT 122
DG WFMDVF+V D G+K+ D VI YIQQ L + R + E T++E T
Sbjct: 65 DGRWFMDVFHVTDRLGRKLTDDSVITYIQQSL---GXWNEPARPAA----LEGLTALELT 117
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
G DR GL SEV AVLADL C VV+A WTH R A V + G D R++ I
Sbjct: 118 GPDRTGLLSEVFAVLADLQCGVVDARAWTHRGRLACVAFL----RGEGXAD--RVARILA 171
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRD 222
L +++RG + A ++ + + +RRLH++M D +
Sbjct: 172 RLGHLVRGDGEAPGAVAAVPAAAVAHVDRRLHELMAADHN 211
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 12/138 (8%)
Query: 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG-WFMDVFNVIDCDGKKIRDKEV 86
+V+ V ++ +L V+ L+ ++ V+ + + G F + DG IR +
Sbjct: 235 SVVTVQCRDRPKLLFDVVCALHCLDYVVFHGTVDTAAGDRXXQEFYIRSADGSPIRSEAE 294
Query: 87 IDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVN 146
+ + Q L+ A RS GV +E DRPGL SEV + V +
Sbjct: 295 RERLAQCLQA----AIDRRSLEGV-------RLELCTPDRPGLLSEVTRTFRENGLLVAH 343
Query: 147 AEIWTHNDRAAAVVHVTD 164
AE+ T A+ V +VTD
Sbjct: 344 AEVSTKGGLASNVFYVTD 361
>gi|242041567|ref|XP_002468178.1| hypothetical protein SORBIDRAFT_01g041100 [Sorghum bicolor]
gi|241922032|gb|EER95176.1| hypothetical protein SORBIDRAFT_01g041100 [Sorghum bicolor]
Length = 448
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/225 (41%), Positives = 130/225 (57%), Gaps = 8/225 (3%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG 64
Y +R MN PRVV+DN CA AT+++V S KHG+LL+ + L+D + ++K YISSD
Sbjct: 10 YELFVRHMNTPRVVVDNGVCATATLVQVHSARKHGVLLEAVAALSDHGVCVRKGYISSDD 69
Query: 65 G-WFMDVFNVIDCDGKKIRDKE-VIDYIQQRLETDA---SFAPSLRSSVGVMPTEEHTSI 119
G WFMDVF+V D G+K+ D + ++ ++ L DA P+ G P T +
Sbjct: 70 GRWFMDVFHVTDASGRKVADADALLARLESSLTADALPPRTPPAAAVGNGAGPAMP-TLL 128
Query: 120 EFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLST 179
E G DRPGL SEV AVL DL C++ +A WTH R AA+V V D TG I D R+
Sbjct: 129 ELVGADRPGLLSEVFAVLHDLRCDIADARAWTHGGRVAALVFVRDVETGAPIDDAARVRR 188
Query: 180 IKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
++ L +VLRG A+ +N +RRLHQ++ +D + E
Sbjct: 189 VESRLRHVLRG--GALGARMVREDAAAVNMDRRLHQLLNEDGEAE 231
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 24/161 (14%)
Query: 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRD---- 83
+V+ V ++ +L V+ L D++ V+ +DG F + DG+ I
Sbjct: 253 SVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRLDGRPISSAAER 312
Query: 84 KEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCN 143
+ VI +Q +E AS E +E TDR GL + V V + +
Sbjct: 313 RRVIQCLQAAIERRAS---------------EGVRLELRITDRRGLLAYVTRVFRENSLS 357
Query: 144 VVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
V +AEI T D+A V HVTD + A DPK TI E++
Sbjct: 358 VTHAEITTRGDKAMNVFHVTDVAGRPA--DPK---TIDEVI 393
>gi|326518242|dbj|BAK07373.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 492
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/238 (39%), Positives = 141/238 (59%), Gaps = 14/238 (5%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+ ++ ++ R P VV+DN T D T++KVDSVN+ G+LL+++Q+L D++LVI K+YI
Sbjct: 9 FEPDFDPVLDRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVISKSYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL----ETDASFAPSLRSSVG--VMP-- 112
SSDGGW MDVF+V D G K+ D + +IQQ L + + +P + +G V P
Sbjct: 69 SSDGGWLMDVFHVTDQIGCKLTDPSLPGFIQQALLPFQRSGSGPSPKFTTCLGNVVGPGG 128
Query: 113 --TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+ S+EFT DRPGL S + VL D C+V + + WTH+ RAA V++VT A
Sbjct: 129 PDVSDCASLEFTVHDRPGLLSSITQVLVDQGCHVASGQAWTHSGRAAGVLYVTATGADSA 188
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAK--TSLSPP--GIMNRERRLHQIMFDDRDYE 224
P R + I+ L+ V+ ++ + +S P G ++ ERR+HQ+M DD DYE
Sbjct: 189 ALHPSRWARIERLVNAVVDARENMSGERRWVCMSAPVRGRVHTERRMHQLMHDDGDYE 246
>gi|357113138|ref|XP_003558361.1| PREDICTED: uncharacterized protein LOC100843093 [Brachypodium
distachyon]
Length = 454
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/255 (40%), Positives = 144/255 (56%), Gaps = 18/255 (7%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG 64
Y +R MN PRVV+DN C AT+++V S K+G+LL+ + L+D + ++K YISSD
Sbjct: 10 YEHFVRHMNTPRVVVDNGVCETATLVQVHSARKNGVLLEAVAALSDHGVCVRKGYISSDD 69
Query: 65 G-WFMDVFNVIDCDGKKIRDKE-VIDYIQQRLETDASFAPSLRSSVGV----MPTEEHTS 118
G WFMDVF+V D G+K+ D + ++ ++ L A+ A +L G E +
Sbjct: 70 GRWFMDVFHVTDAAGRKVADADKLLARLESSLAAAAATADALPRPAGCDSSPAQNEGLSL 129
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
+E G DRPGL SEV AVL DL C++V+A+ WTH R AA+V V D TG I D R
Sbjct: 130 LELIGVDRPGLLSEVFAVLHDLRCSIVDAKAWTHGGRVAALVFVRDEDTGAPIDDAARTR 189
Query: 179 TIKELLFNVLRGYDDFRKAKTSL-SPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKS 237
I+ L VLRG R A+T L + N +RRLHQ++ +DR+ A GR +
Sbjct: 190 RIESRLRYVLRG--GARGARTILVDAAAVGNLDRRLHQLLNEDRE------ADGR--PAA 239
Query: 238 SRPQTCSMLCFMEWS 252
RP T + + EW
Sbjct: 240 DRP-TTTAVAVQEWG 253
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 13/153 (8%)
Query: 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVI 87
+V+ V ++ +L V+ L D++ V+ +DG F + DG+ I
Sbjct: 258 SVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRLDGQPISSAAER 317
Query: 88 DYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNA 147
+ QRL+ A R+S GV +E + DR GL + V V + +V +A
Sbjct: 318 QRVIQRLQA----AIERRASEGV-------RLELSIKDRRGLLAYVTRVFRENSLSVTHA 366
Query: 148 EIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
EI T D+A V HVTD + A DPK + +
Sbjct: 367 EITTRGDKALNVFHVTDVAGRPA--DPKAIDEV 397
>gi|242061954|ref|XP_002452266.1| hypothetical protein SORBIDRAFT_04g022677 [Sorghum bicolor]
gi|241932097|gb|EES05242.1| hypothetical protein SORBIDRAFT_04g022677 [Sorghum bicolor]
Length = 422
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 95/204 (46%), Positives = 129/204 (63%), Gaps = 26/204 (12%)
Query: 35 VNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
+NK+GILL+V+QVL+D++L I KAYI+SDGGWFMDVF+V+D G+KI D + I YI++ L
Sbjct: 1 MNKNGILLEVLQVLSDLDLHIFKAYITSDGGWFMDVFHVVDKQGQKITDDKTIKYIEKAL 60
Query: 95 ETDASFAPSLRS-----SVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEI 149
+++ S SVG+ +HT+IE G DR GL SE+ AVLADL CNV+ AE+
Sbjct: 61 GPESNLLCPKASNKQGRSVGLHSIGDHTAIELKGPDRTGLLSEIFAVLADLQCNVLAAEV 120
Query: 150 WTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLR----------------GYDD 193
WTH R A VV+V D +TG AI DP R+S I+ L +VLR + +
Sbjct: 121 WTHRMRVACVVYVNDVATGLAIDDPGRVSRIENRLRHVLRGYGGGGGGNDDDDGSGAHAN 180
Query: 194 FRKAKTSLSPPGIMNRERRLHQIM 217
F A S +P + +RRLHQ+M
Sbjct: 181 FTDA--SSTPHHL---DRRLHQLM 199
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 12/152 (7%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V +++ +V+ V ++ +L ++ L D+ V+ A +SS+ + + +
Sbjct: 220 PEVTVEHCEEKSYSVVNVKCRDRSKLLFDIVCTLTDMEYVVFHAAVSSEANYGIQELYIR 279
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DGK + E I+ SL +++ +E T +E G DR GL S+V
Sbjct: 280 RKDGKTLLKDEAEKVIR-----------SLEAAISRRVSEGFT-LEVRGRDRVGLLSDVT 327
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
VL + V A++ T +A V +V D S
Sbjct: 328 RVLREHGLTVSRADVTTEGGQATNVFYVRDPS 359
>gi|28273389|gb|AAO38475.1| putative ACT domain containing protein [Oryza sativa Japonica
Group]
Length = 512
Score = 163 bits (413), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 97/243 (39%), Positives = 142/243 (58%), Gaps = 19/243 (7%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+ ++ L+ R P VV+DN T D T++KVDSVN+ G+LL+++Q+L D++LVI K+YI
Sbjct: 9 FEPDFDPLLYRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVISKSYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL---ETDASFAPSLRSSV--------G 109
SSDGGW MDVF+V D G+K+ D + ++IQ+ L + PS R + G
Sbjct: 69 SSDGGWLMDVFHVTDQMGRKLTDPSLPEFIQRALVPCQRPGGNGPSPRFTTCLGNVVGPG 128
Query: 110 VMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD----H 165
+ ++EFT DRPGL S + VLAD C+V + + WTH+ RAA V++VT
Sbjct: 129 GPDVSDCAALEFTVHDRPGLLSSITQVLADNGCHVASGQAWTHSGRAAGVLYVTTAGGGA 188
Query: 166 STGYAIKDPKRLSTIKELLFNVLRGYDDFRKAK--TSLSPP--GIMNRERRLHQIMFDDR 221
+ A P R I+ L+ V+ + + S+S P G ++ ERRLHQ+M DDR
Sbjct: 189 AAEAAAPAPSRWEHIEGLVDAVMGAREKLTGERHWVSMSAPVEGRVHTERRLHQLMHDDR 248
Query: 222 DYE 224
DYE
Sbjct: 249 DYE 251
>gi|357140136|ref|XP_003571626.1| PREDICTED: uncharacterized protein LOC100823992 [Brachypodium
distachyon]
Length = 470
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/234 (43%), Positives = 141/234 (60%), Gaps = 10/234 (4%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
D +Y L R+ RV +DN +C TV+KV+S NK +LL+V++VL D+ L I K Y+
Sbjct: 8 FDPDYENLNERIYGTRVHVDNESCGRCTVVKVNSRNKQDLLLEVLEVLIDLELSITKCYV 67
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSS--VGVMP--TEEH 116
SSDGGW +DVF+V D +G K+ +K+ I YI+Q + T + ++R S P +
Sbjct: 68 SSDGGWSLDVFHVKDQEGSKVYNKKAISYIEQAICTREARRFTVRGSNEFASRPDVAAHY 127
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE G +RPG+FSE+ AVLA+ CNV+ A W+H D A V V+D ST I D R
Sbjct: 128 TEIEMIGHNRPGIFSEISAVLAEEGCNVIEAHAWSHKDSLACVAFVSDESTSSPINDRNR 187
Query: 177 LSTIKELLFNVLRGY----DDFRKAKTS-LSPPGIMNR-ERRLHQIMFDDRDYE 224
L+TI++ L VLR DD R A+ L G+ + ERRLHQ+MF RD++
Sbjct: 188 LATIEDHLGTVLRSGTSMDDDQRSARAHLLGVDGLTSHPERRLHQLMFASRDFD 241
>gi|414865819|tpg|DAA44376.1| TPA: ACR8 [Zea mays]
Length = 440
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/224 (40%), Positives = 129/224 (57%), Gaps = 10/224 (4%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG 64
Y +R MN PRVV+DN CA AT+++V S KHG+LL+ + L+D + ++K YISSD
Sbjct: 10 YELFVRHMNTPRVVVDNGVCATATLVQVHSARKHGVLLEAVAALSDHGVCVRKGYISSDD 69
Query: 65 G-WFMDVFNVIDCDGKKIRDKEVIDYI---QQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
G WFMDVF+V D G+K+ D + + + L DA + ++ PT +E
Sbjct: 70 GRWFMDVFHVTDAAGRKVADADADALLARLESSLSADALPPRTPPAAAAGTPT----LLE 125
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180
G DRPGL SEV AVL DL C++ +A WTH R AA+V V D TG I D R+ +
Sbjct: 126 LVGADRPGLLSEVFAVLHDLRCDIADARAWTHGGRVAALVFVRDEDTGAPIDDAARVRRV 185
Query: 181 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
+ L +VLRG A+ + +N +RRLHQ++ +D + E
Sbjct: 186 ESRLRHVLRG--GALGARMVRADAAAVNMDRRLHQLLNEDGEAE 227
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 70/161 (43%), Gaps = 24/161 (14%)
Query: 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRD---- 83
+V+ V ++ +L V+ L D++ V+ +DG F + DG+ I
Sbjct: 247 SVLTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRLDGRPISSAAER 306
Query: 84 KEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCN 143
+ VI +Q +E AS E +E TDR GL + V V + +
Sbjct: 307 RRVIQCLQAAIERRAS---------------EGVRLELRITDRRGLLAYVTRVFRENSLS 351
Query: 144 VVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
V +AEI T D A V HVTD + A DPK TI E++
Sbjct: 352 VTHAEITTRGDMAMNVFHVTDVAGRPA--DPK---TIDEVI 387
>gi|195639256|gb|ACG39096.1| ACR8 [Zea mays]
Length = 450
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/249 (38%), Positives = 132/249 (53%), Gaps = 11/249 (4%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS-D 63
Y +R MN PRVV+DN CA AT+++V S KHG+LL + L+D + ++K YISS D
Sbjct: 10 YELFVRHMNNPRVVVDNGACATATLVQVHSARKHGVLLBAVXALSDHGVCVRKGYISSBD 69
Query: 64 GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSI-EFT 122
G WFMDVF+V+D G K+ D + RLE+ S ++ E
Sbjct: 70 GRWFMDVFHVVDAAGGKVADAGAL---LARLESSLSADALPPRPPPAAAGAGTPTLLELV 126
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
G DRPGL SEV AVL DL C V+A WTH R AA+V V D TG I D R+ ++
Sbjct: 127 GADRPGLLSEVFAVLHDLRCGTVDARAWTHAGRVAALVFVRDEETGSPIDDAARVRRVES 186
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQT 242
L +VLRG A+ + +N +RRLHQ++ +D + R E ++ P T
Sbjct: 187 RLRHVLRG--GALGARMVRADASAVNMDRRLHQLLNEDGE---AGSRADRAESEAEAP-T 240
Query: 243 CSMLCFMEW 251
+ + +W
Sbjct: 241 PTAVAVQDW 249
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 72/172 (41%), Gaps = 16/172 (9%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
P V + + +V+ V ++ +L V+ L D++ V+ +D F
Sbjct: 240 TPTAVAVQDWVERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFHTDDDHARQEFY 299
Query: 73 VIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSE 132
+ D + I + Q LE A R+S GV +E TDR GL +
Sbjct: 300 IRRLDERPISSATERRRVIQCLEA----AIERRASEGV-------RLELRITDRRGLLAY 348
Query: 133 VCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
V V + +V +AEI T D A V HVTD + A DPK TI E++
Sbjct: 349 VTRVFRENSLSVTHAEITTRGDMAMNVFHVTDVAGRPA--DPK---TIDEVI 395
>gi|413956339|gb|AFW88988.1| hypothetical protein ZEAMMB73_242006 [Zea mays]
Length = 486
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/249 (38%), Positives = 132/249 (53%), Gaps = 11/249 (4%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG 64
Y +R MN PRVV+DN CA AT+++V S KHG+LL + L+D + ++K YISSD
Sbjct: 10 YELFVRHMNNPRVVVDNGACATATLVQVHSARKHGVLLDAVAALSDHGVCVRKGYISSDD 69
Query: 65 G-WFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSI-EFT 122
G WFMDVF+V+D G K+ D + RLE+ S ++ E
Sbjct: 70 GRWFMDVFHVVDAAGGKVADAGAL---LARLESSLSADALPPRPPPAAAGAGTPTLLELV 126
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
G DRPGL SEV AVL DL C V+A WTH R AA+V V D TG I D R+ ++
Sbjct: 127 GADRPGLLSEVFAVLHDLRCGTVDARAWTHAGRVAALVFVRDEETGSPIDDAARVRRVES 186
Query: 183 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQT 242
L +VLRG A+ + +N +RRLHQ++ +D + R E ++ P T
Sbjct: 187 RLRHVLRG--GALGARMVRADASAVNMDRRLHQLLNEDGE---AGSRADRAESEAEAP-T 240
Query: 243 CSMLCFMEW 251
+ + +W
Sbjct: 241 PTAVAVQDW 249
>gi|242038257|ref|XP_002466523.1| hypothetical protein SORBIDRAFT_01g009300 [Sorghum bicolor]
gi|241920377|gb|EER93521.1| hypothetical protein SORBIDRAFT_01g009300 [Sorghum bicolor]
Length = 500
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 94/246 (38%), Positives = 142/246 (57%), Gaps = 22/246 (8%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+ ++ L+ R P VV+DN T D T++KVDSVN+ G+LL+++Q+L D++LVI K+YI
Sbjct: 9 FEPDFDPLLDRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVIYKSYI 68
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL-----ETDASFAPSLRSSVG--VMP- 112
SSDGGW MDVF+V D G+K+ D + ++IQ+ L + P + +G V P
Sbjct: 69 SSDGGWLMDVFHVTDQIGRKLTDPSLPEFIQRALVPFHRPGNGPSPPRFTTCLGNVVGPG 128
Query: 113 ---TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
+ ++EFT DR GL S + +VL D C+V + + WTHN RAA V++VT +
Sbjct: 129 GPDVSDCAALEFTVHDRAGLLSSITSVLVDNGCHVASGQAWTHNGRAAGVLYVTTTAAAT 188
Query: 170 AIKD-------PKRLSTIKELLFNVLRGYDDFRKAK--TSLSPP--GIMNRERRLHQIMF 218
P R + I+ L+ V+ ++ + +S P G ++ ERRLHQ+M
Sbjct: 189 TADGAGAAALLPSRWARIERLVNAVVDARENVTGERHWVCVSEPVQGRVHTERRLHQLMH 248
Query: 219 DDRDYE 224
DDRDYE
Sbjct: 249 DDRDYE 254
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 89/213 (41%), Gaps = 20/213 (9%)
Query: 6 AKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
A+ RR RV ID+ V+K+ S ++ +L + L D+ V+ A + S G
Sbjct: 276 ARTARRGAVTRVSIDSWEERGYAVVKMTSRDRPRLLFDTVCALTDMQYVVFHATVGSQGA 335
Query: 66 WFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTD 125
+ + + DG+ + +Q++ A R++ GV +E D
Sbjct: 336 LAIQEYYIRHKDGRTVDSSAE----RQKVSRCLVAAVERRATHGV-------RVEVRAAD 384
Query: 126 RPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK---- 181
R GL S+ VL + +++ E+ H D A + ++ + G + R +
Sbjct: 385 RSGLLSDFTRVLREHGLSLLRVELKRHKDDAFGIFYLVTDTGGEVRAEALRAVQARVAEM 444
Query: 182 ELLFNVLR---GYDDFRKAKTSLSPPGIMNRER 211
++ +V++ G+ R KTS+ P + ER
Sbjct: 445 DISLDVVKEAPGWPPVR--KTSVPAPPVAGPER 475
>gi|357139522|ref|XP_003571330.1| PREDICTED: uncharacterized protein LOC100825212 [Brachypodium
distachyon]
Length = 456
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/233 (41%), Positives = 132/233 (56%), Gaps = 30/233 (12%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKV-------DSVNKHGILLQVIQVLNDVNLVI 55
+EY KL+ RM+ P+VVIDN C AT+++V DS G+LL+ +QVL D++L I
Sbjct: 5 NEYEKLVIRMDTPKVVIDNAACPTATLVQVRLPSTSVDSARNRGVLLEAVQVLADLDLSI 64
Query: 56 KKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPT-- 113
KAYISSDG WFMDVF+V D G+K+ D VI YIQQ L + VG+ P+
Sbjct: 65 NKAYISSDGRWFMDVFHVTDRRGRKLTDHSVISYIQQSLA-------AWNGPVGIDPSAS 117
Query: 114 ----EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
E T +E TG DR GL SEV AVLAD+ C VV+A W+H R A +V++ D
Sbjct: 118 AAGMEGLTVLELTGADRTGLISEVFAVLADMGCGVVDARAWSHRGRLACLVYLRDADVAA 177
Query: 170 AIKDPKRLSTIKELLFNVLRG---YDDFRKAKTSLSPPG--IMNRERRLHQIM 217
A + I+ L +LRG + F + + P + + +RRLHQ+M
Sbjct: 178 AGA-----ARIEARLTPLLRGAAAAEPFSDSSVVAAVPACSVSHPDRRLHQLM 225
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 70/168 (41%), Gaps = 17/168 (10%)
Query: 10 RRMNP-----PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSD 63
RR +P P V +++ +V+ V ++ +L V+ L D++ V+ + +S
Sbjct: 236 RRASPSEADTPSVSVESWAERGYSVVTVQCGDRPKLLYDVVCTLTDMDYVVFHGTVDTSA 295
Query: 64 GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTG 123
G F + DG I D +R+ A RS GV +E
Sbjct: 296 SGGARQEFYIRSADGSPISS----DAEMRRVSLCLQDAIERRSFEGV-------RLELCT 344
Query: 124 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 171
DRPGL S+V + V AE+ T D A+ V +VT + G A+
Sbjct: 345 PDRPGLLSDVTRTFRENGLLVAQAEVSTKGDMASNVFYVTGTTAGQAV 392
>gi|125545602|gb|EAY91741.1| hypothetical protein OsI_13381 [Oryza sativa Indica Group]
Length = 551
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/252 (38%), Positives = 142/252 (56%), Gaps = 28/252 (11%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+ ++ L+ R P VV+DN T D T++KVDSVN+ G+LL+++Q+L D++LVI K+YI
Sbjct: 9 FEPDFDPLLYRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVISKSYI 68
Query: 61 SSDGGWFMD---------VFNVIDCDGKKIRDKEVIDYIQQRL---ETDASFAPSLRSSV 108
SSDGGW MD +F+V D G+K+ D + ++IQ+ L + PS R +
Sbjct: 69 SSDGGWLMDGKNTTSFGSLFHVTDQMGRKLTDPSLPEFIQRALVPCQRPGGNGPSPRFTT 128
Query: 109 --------GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVV 160
G + ++EFT DRPGL S + VLAD C+V + + WTH+ RAA V+
Sbjct: 129 CLGNVVGPGGPDVSDCAALEFTVHDRPGLLSSITQVLADNGCHVASGQAWTHSGRAAGVL 188
Query: 161 HVTD----HSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAK--TSLSPP--GIMNRERR 212
+VT + A P R I+ L+ V+ + + S+S P G ++ ERR
Sbjct: 189 YVTTAGGGAAAEAAAPAPSRWEHIEGLVDAVMGAREKLTGERHWVSMSAPVEGRVHTERR 248
Query: 213 LHQIMFDDRDYE 224
LHQ+M DDRDYE
Sbjct: 249 LHQLMHDDRDYE 260
>gi|115455115|ref|NP_001051158.1| Os03g0729800 [Oryza sativa Japonica Group]
gi|108710889|gb|ABF98684.1| ACT domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113549629|dbj|BAF13072.1| Os03g0729800 [Oryza sativa Japonica Group]
gi|125587799|gb|EAZ28463.1| hypothetical protein OsJ_12444 [Oryza sativa Japonica Group]
Length = 551
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/252 (38%), Positives = 142/252 (56%), Gaps = 28/252 (11%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+ ++ L+ R P VV+DN T D T++KVDSVN+ G+LL+++Q+L D++LVI K+YI
Sbjct: 9 FEPDFDPLLYRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVISKSYI 68
Query: 61 SSDGGWFMD---------VFNVIDCDGKKIRDKEVIDYIQQRL---ETDASFAPSLRSSV 108
SSDGGW MD +F+V D G+K+ D + ++IQ+ L + PS R +
Sbjct: 69 SSDGGWLMDGKNTTSFGSLFHVTDQMGRKLTDPSLPEFIQRALVPCQRPGGNGPSPRFTT 128
Query: 109 --------GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVV 160
G + ++EFT DRPGL S + VLAD C+V + + WTH+ RAA V+
Sbjct: 129 CLGNVVGPGGPDVSDCAALEFTVHDRPGLLSSITQVLADNGCHVASGQAWTHSGRAAGVL 188
Query: 161 HVTD----HSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAK--TSLSPP--GIMNRERR 212
+VT + A P R I+ L+ V+ + + S+S P G ++ ERR
Sbjct: 189 YVTTAGGGAAAEAAAPAPSRWEHIEGLVDAVMGAREKLTGERHWVSMSAPVEGRVHTERR 248
Query: 213 LHQIMFDDRDYE 224
LHQ+M DDRDYE
Sbjct: 249 LHQLMHDDRDYE 260
>gi|302841007|ref|XP_002952049.1| hypothetical protein VOLCADRAFT_121048 [Volvox carteri f.
nagariensis]
gi|300262635|gb|EFJ46840.1| hypothetical protein VOLCADRAFT_121048 [Volvox carteri f.
nagariensis]
Length = 735
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/227 (39%), Positives = 135/227 (59%), Gaps = 9/227 (3%)
Query: 4 EYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD 63
EY L R++PP V IDN T AD T+I +DS N+ G L++V+Q+L ++ L + KA ISSD
Sbjct: 45 EYETLELRVHPPNVNIDNETYADRTLITLDSANRPGTLVEVVQLLTELGLCVIKARISSD 104
Query: 64 GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTS----- 118
GGWF+D F+V D GKK+ ++ + I++ L DA P + GV E S
Sbjct: 105 GGWFVDEFSVTDA-GKKVTNERKLRAIRKVLSVDAD--PGSDNESGVDSAFEEASQCSTL 161
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
E G DR GL ++V +L C V +A +WTHN R A V+ V D STG IKD +L+
Sbjct: 162 FELAGNDRIGLLADVIELLKINGCEVRSAAVWTHNLRCAFVISVLDCSTGLPIKDNIKLA 221
Query: 179 TIKELLFNVLRGYDDFRKAKTSLS-PPGIMNRERRLHQIMFDDRDYE 224
+++LL N++ D ++ ++S G+++ ERRLHQ++ + + +
Sbjct: 222 RLRQLLLNMMHTPGDVAESVVNVSNTKGLIHYERRLHQLLLREEEAQ 268
>gi|12323212|gb|AAG51584.1|AC011665_5 unknown protein, 3' partial [Arabidopsis thaliana]
Length = 104
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/98 (69%), Positives = 83/98 (84%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
MD+EY KLIRRMNPPRVVIDN++C ATVI+VDS N++GILL+V+Q+L D+NL I KAYI
Sbjct: 7 MDNEYEKLIRRMNPPRVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYI 66
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDA 98
SSDGGWFMDVFNV D DG K+ D+ V+DYIQ+ L +A
Sbjct: 67 SSDGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLGPEA 104
>gi|222624567|gb|EEE58699.1| hypothetical protein OsJ_10135 [Oryza sativa Japonica Group]
Length = 369
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/218 (39%), Positives = 118/218 (54%), Gaps = 23/218 (10%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG 64
Y +R MN PRVV+D+ CA AT+++V S KHG+LL+ + L++ + ++K YISSD
Sbjct: 10 YELFVRHMNTPRVVVDSGVCATATLVQVHSARKHGMLLEAVAALSEHGVCVRKGYISSDD 69
Query: 65 G-WFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTG 123
G WFMDVF+V D G+K+ D D + RLE+ S R++ G E T +E G
Sbjct: 70 GRWFMDVFHVTDAAGRKVADA---DALLARLESSLSAEALPRAAAGGPAAEGLTLLELVG 126
Query: 124 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 183
DRP F WTH R AA+V V D TG I D R+ I+
Sbjct: 127 ADRPASFRRA----------------WTHGGRVAALVFVRDEETGAPIDDAARVRRIESR 170
Query: 184 LFNVLRGYDDFRKAKTSLS-PPGIMNRERRLHQIMFDD 220
L +VLRG R A+T L+ P N +RRLHQ++ +D
Sbjct: 171 LRHVLRG--GARCARTVLADPSAAGNLDRRLHQLLKED 206
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 19/133 (14%)
Query: 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRD---- 83
+V+ V ++ +L V+ L D++ V+ +DG F + DG+ I
Sbjct: 231 SVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRSDGRPISSEAER 290
Query: 84 KEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCN 143
+ VI +Q +E AS E +E +DR GL + V V + +
Sbjct: 291 QHVIRCLQAAIERRAS---------------EGVRLELRISDRRGLLAYVTRVFRENGLS 335
Query: 144 VVNAEIWTHNDRA 156
V +AEI T +D A
Sbjct: 336 VTHAEITTRDDMA 348
>gi|145334915|ref|NP_001078803.1| ACT domain repeat 1 [Arabidopsis thaliana]
gi|332010737|gb|AED98120.1| ACT domain repeat 1 [Arabidopsis thaliana]
Length = 425
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/196 (39%), Positives = 115/196 (58%), Gaps = 15/196 (7%)
Query: 44 VIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETD--ASFA 101
++QVL D++LVI K YISSDG WFMDVF+V D G K+ D+ +I YIQQ + +
Sbjct: 1 MVQVLADLDLVISKCYISSDGEWFMDVFHVTDQLGNKLTDRSLILYIQQAICSSRTGGIT 60
Query: 102 PSLRSSVGVMPTE-----EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
++S++ + EHT+ E TG +RPGL SE+ AVL+D+ C+V A WTH++RA
Sbjct: 61 KEMQSNLKREVQQRHVSTEHTAFEITGINRPGLLSEISAVLSDIGCHVTAAVAWTHHERA 120
Query: 157 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYD--------DFRKAKTSLSPPGIMN 208
A V+++ D G I DP R + +K+ L V+ + R + P G +
Sbjct: 121 AMVIYLEDGFNGGPIIDPIRKAQVKDHLDTVMEAHHIVGDVSHVVVRVVEAKGVPVGWAH 180
Query: 209 RERRLHQIMFDDRDYE 224
ERRLH++M+ + DYE
Sbjct: 181 TERRLHELMYGEGDYE 196
>gi|125543116|gb|EAY89255.1| hypothetical protein OsI_10752 [Oryza sativa Indica Group]
Length = 398
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/183 (44%), Positives = 107/183 (58%), Gaps = 7/183 (3%)
Query: 40 ILLQVIQVLNDVNLVIKKAYISSDGG-WFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDA 98
+LL+ + L++ + ++K YISSD G WFMDVF+V D G+K+ D D + RLE+
Sbjct: 1 MLLEAVAALSEHGVCVRKGYISSDDGRWFMDVFHVTDAAGRKVADA---DALLARLESSL 57
Query: 99 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 158
S R++ G E T +E G DRPGL SEV AVL DL CN V A WTH R AA
Sbjct: 58 SAEALPRAAAGGPAAEGLTLLELVGADRPGLLSEVFAVLHDLRCNTVEARAWTHGGRVAA 117
Query: 159 VVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLS-PPGIMNRERRLHQIM 217
+V V D TG I D R+ I+ L +VLRG R A+T L+ P N +RRLHQ++
Sbjct: 118 LVFVRDEETGAPIDDAARVRRIESRLRHVLRG--GARCARTVLADPSAAGNLDRRLHQLL 175
Query: 218 FDD 220
+D
Sbjct: 176 NED 178
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 71/161 (44%), Gaps = 24/161 (14%)
Query: 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRD---- 83
+V+ V ++ +L V+ L D++ V+ +DG F + DG+ I
Sbjct: 203 SVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRSDGRPISSEAER 262
Query: 84 KEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCN 143
+ VI +Q +E AS E +E +DR GL + V V + +
Sbjct: 263 QHVIRCLQAAIERRAS---------------EGVRLELRISDRRGLLAYVTRVFRENGLS 307
Query: 144 VVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
V +AEI T +D A V HVTD + A DPK TI E++
Sbjct: 308 VTHAEITTRDDMAMNVFHVTDVAGRPA--DPK---TIDEVI 343
>gi|343172210|gb|AEL98809.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 129
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 68/126 (53%), Positives = 86/126 (68%), Gaps = 11/126 (8%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+DDE+ K + RMNPPRV +DNN+ + T+IKVDS NK G LL+V+QVLND+NL I++AYI
Sbjct: 10 VDDEFQKFVLRMNPPRVTVDNNSSRNTTLIKVDSANKRGSLLEVVQVLNDMNLHIRRAYI 69
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS-----SVGVMPTEE 115
SSDG WFMDVF+V D G K+ + +V + IQQ S P RS SVGV E
Sbjct: 70 SSDGEWFMDVFHVTDQHGNKLSEDDVAERIQQ------SLGPRTRSFRSKRSVGVQSAVE 123
Query: 116 HTSIEF 121
HT+IE
Sbjct: 124 HTTIEL 129
>gi|241865260|gb|ACS68708.1| amino acid binding protein [Sonneratia alba]
gi|241865493|gb|ACS68779.1| amino acid binding protein [Sonneratia alba]
Length = 129
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/129 (51%), Positives = 90/129 (69%), Gaps = 5/129 (3%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMD-VFNVID 75
V IDN +C D T+IKVDS+NK GILL+V+Q+L D++L+I KAY+SSDGGWFMD VF+ D
Sbjct: 1 VSIDNTSCTDCTLIKVDSMNKPGILLEVVQILADLDLIITKAYVSSDGGWFMDAVFHATD 60
Query: 76 CDGKKIRDKEVIDYIQQRLETDASFAPSLR----SSVGVMPTEEHTSIEFTGTDRPGLFS 131
G KI D++ IDYI++ L + ++ VG+ ++T+IE TG DRPGL S
Sbjct: 61 QQGNKITDRKTIDYIEKVLGPNGHLTDRIKMWPGKRVGIHSIGDYTAIELTGKDRPGLLS 120
Query: 132 EVCAVLADL 140
E+ AVLA L
Sbjct: 121 EISAVLAGL 129
>gi|343172212|gb|AEL98810.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 129
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/121 (54%), Positives = 86/121 (71%), Gaps = 1/121 (0%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+DDE+ K + RMNPPRV +DNN+ + T+IKVDS NK G LL+V+QVLND+NL +++AYI
Sbjct: 10 VDDEFQKFVLRMNPPRVTVDNNSSRNTTLIKVDSANKRGSLLEVVQVLNDMNLHVRRAYI 69
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
SSDG WFMDVF+V D +G K+ + +V + IQQ L S R SVGV EHT+IE
Sbjct: 70 SSDGEWFMDVFHVTDQNGNKLSEDDVAERIQQSLGPRTCSFRSKR-SVGVQSAVEHTTIE 128
Query: 121 F 121
Sbjct: 129 L 129
>gi|159463310|ref|XP_001689885.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283873|gb|EDP09623.1| predicted protein [Chlamydomonas reinhardtii]
Length = 580
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 126/252 (50%), Gaps = 47/252 (18%)
Query: 4 EYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD 63
EY L R++PP VV+DN + +D T+I +DS N+ G L++V+Q+L ++ L + KA ISSD
Sbjct: 122 EYETLELRVHPPNVVVDNESYSDRTLITLDSANRPGTLVEVVQLLTELGLCVTKARISSD 181
Query: 64 GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVM--PTEEHTSIEF 121
GGWF+D F+V D GKK+ L D + VGV ++ T E
Sbjct: 182 GGWFVDEFHVTDA-GKKV------------LSVDTDPGSDAEADVGVFEEASQCSTVFEL 228
Query: 122 TGTDRPGLFSEVCAVLADLHC--------NVVNAEIWTHNDRAAAVVHVTD--------- 164
G DR GL +EV A+L + C V +A +WTHN R A V+ V +
Sbjct: 229 AGNDRIGLLAEVIALLKNNGCEVGPGAWGQVRSAAVWTHNHRVAFVISVLEASASATAGA 288
Query: 165 ----------HSTGYAIKDPKRLSTIKELLFNVL--RGYDDFRKAKTSLSPPGIMNRERR 212
IKD +L+ +++LL ++ G D T+ G+++ ERR
Sbjct: 289 VAAPAPGGGVGGGSCPIKDGIKLARLRQLLLGMMDPSGQDSVVNVATT---KGLIHYERR 345
Query: 213 LHQIMFDDRDYE 224
LHQ++ + + +
Sbjct: 346 LHQLLLKEEEAQ 357
>gi|222640928|gb|EEE69060.1| hypothetical protein OsJ_28067 [Oryza sativa Japonica Group]
Length = 314
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 99/159 (62%), Gaps = 18/159 (11%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIK--------VDSVNKHGILLQVIQVLNDVNLV 54
DE+ KL+ RMNPPRV +DN + AT++K VDS NK+G LL+V+QVL ++ L
Sbjct: 12 DEFEKLVIRMNPPRVTVDNTSDMTATLVKASNTSLFLVDSANKYGTLLEVVQVLTELKLT 71
Query: 55 IKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDA-SF-APSLRS-SVGVM 111
IK+AYISSDG WFMD +N K+ D VID I+ L + SF AP RS +
Sbjct: 72 IKRAYISSDGEWFMDGWN-------KLYDGLVIDRIELSLGAGSLSFRAPPERSVELEAE 124
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIW 150
T+IE G DRPGL SEV AVL DL CN+V++E +
Sbjct: 125 AAAAQTAIELIGKDRPGLLSEVFAVLTDLKCNIVSSEEY 163
>gi|159483207|ref|XP_001699652.1| hypothetical protein CHLREDRAFT_186726 [Chlamydomonas reinhardtii]
gi|158281594|gb|EDP07348.1| predicted protein [Chlamydomonas reinhardtii]
Length = 756
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 110/191 (57%), Gaps = 12/191 (6%)
Query: 4 EYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD 63
EY L R++PP VVIDN T D TVI +DS N+ G L++V+Q L ++ L I+ A ISSD
Sbjct: 45 EYETLELRIHPPNVVIDNETYEDVTVITIDSANRPGTLIEVVQCLTELGLSIRCARISSD 104
Query: 64 GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL--ETDASFAPSLRSSVGVMPTEEHTSIEF 121
GGWF+D F V + KI D+ I+ I++ L ETDA + E T E
Sbjct: 105 GGWFVDEFFVTETPKGKILDQRKINIIRKVLSIETDAERTARDK--------ELCTVFEL 156
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
G DR GL + V +L C V++A +WT +DR A V+ T+ G + DP +L ++
Sbjct: 157 AGRDRHGLLAAVLQLLVVNGCEVLSAAVWTFHDRVALVISATER--GAPVVDPPKLDRLE 214
Query: 182 ELLFNVLRGYD 192
++L+++L G D
Sbjct: 215 QILYDMLGGGD 225
>gi|384244797|gb|EIE18295.1| hypothetical protein COCSUDRAFT_10349, partial [Coccomyxa
subellipsoidea C-169]
Length = 385
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 130/230 (56%), Gaps = 14/230 (6%)
Query: 4 EYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD 63
+Y L R+NP ++ IDN++ T I++DS N G L++V+Q + +NL I++A ISSD
Sbjct: 1 DYEALELRINPTQIEIDNDSDDLVTRIELDSANYPGTLVEVVQYMLGLNLQIRRARISSD 60
Query: 64 GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTE------EHT 117
WF DVF V + +G+K+R+ +D++++ L + + S+ G M E E T
Sbjct: 61 RSWFHDVFEVTEVNGEKVRNTRKLDFLKRMLNIEEE---GIFSNAGAMGHEGASGPTEST 117
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
+E G D+ G ++V +L + CNV +A +WT+ R A V+ V + G I D +L
Sbjct: 118 VVELAGPDKAGKLAQVTRLLTNNGCNVRSAAVWTYYGRVAFVLSVLE--KGKPIADQVKL 175
Query: 178 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMF--DDRDYER 225
+++++ +++ G + + + G+++ +R LHQ+M D R +++
Sbjct: 176 QGLRQIMLDIM-GPEGEGISGVHVQHSGVVHHDRTLHQMMLAEDSRAWDQ 224
>gi|302850060|ref|XP_002956558.1| hypothetical protein VOLCADRAFT_97579 [Volvox carteri f.
nagariensis]
gi|300258085|gb|EFJ42325.1| hypothetical protein VOLCADRAFT_97579 [Volvox carteri f.
nagariensis]
Length = 763
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 109/189 (57%), Gaps = 8/189 (4%)
Query: 4 EYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD 63
EY L R++PP VVIDN+T D TVI +DS N+ G L++V+Q L ++ L I+ A ISSD
Sbjct: 45 EYETLELRIHPPNVVIDNDTYDDMTVITIDSANRPGTLIEVVQCLTELGLSIRCARISSD 104
Query: 64 GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTG 123
GGWF+D F V + K+ D I+ I++ L ++ + S + + T E G
Sbjct: 105 GGWFVDEFFVTETPKGKLLDPRKINIIRKVLSVESDSSASYKDK------DICTVFELAG 158
Query: 124 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 183
DR GL + V +L C V++A +WT +DR A V+ T+ G + DP +L ++++
Sbjct: 159 RDRHGLLAAVLQLLVVNGCEVLSAAVWTFHDRVALVISATER--GAPVVDPVKLDRLEQI 216
Query: 184 LFNVLRGYD 192
L+++L D
Sbjct: 217 LYDMLGSGD 225
>gi|307103237|gb|EFN51499.1| hypothetical protein CHLNCDRAFT_59210 [Chlorella variabilis]
Length = 997
Score = 110 bits (275), Expect = 7e-22, Method: Composition-based stats.
Identities = 61/181 (33%), Positives = 100/181 (55%), Gaps = 5/181 (2%)
Query: 11 RMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDV 70
R++PP + IDN T + +DS N+ G L+ ++Q +++L I A ISSDGGWF+DV
Sbjct: 463 RVHPPTIDIDNKAHDKWTTVTIDSANRPGSLIYIVQHFTELDLRITSARISSDGGWFVDV 522
Query: 71 FNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSL---RSSVGVMPTEEHTSIEFTGTDRP 127
F++ + +G+K+R+ + + I+Q L L M E T E G DRP
Sbjct: 523 FHLSEPNGEKVRNPKKLQSIKQMLNVYMQQEEDLVLNGDETDDMNRIETTVFELAGPDRP 582
Query: 128 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 187
GL +EV +L CNV +A +WT+ R A V+ +T+ G + D +L +++L+ +
Sbjct: 583 GLLAEVTHLLTHNGCNVRSAAVWTYRGRVAFVLSITE--KGLPVVDGIKLQRLRQLVLGI 640
Query: 188 L 188
+
Sbjct: 641 M 641
>gi|359497228|ref|XP_003635457.1| PREDICTED: uncharacterized protein LOC100854519, partial [Vitis
vinifera]
Length = 338
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 73/113 (64%), Gaps = 3/113 (2%)
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
HT+ E TGTDRPGL SE+ AVLA+L C+V A WTHN R A ++ + D G I+DP+
Sbjct: 1 HTAFEITGTDRPGLMSEISAVLAELSCHVTAAVAWTHNSRVACIICLEDELKGGPIRDPE 60
Query: 176 RLSTIKELLFNVLRG-YDDFRKAKTSLSPP--GIMNRERRLHQIMFDDRDYER 225
RL ++E L NV+ + + K L+ P G + +RRLHQ+MF D+DYER
Sbjct: 61 RLVHVEEQLENVVEARHQSGERRKVRLTAPVAGRTHTDRRLHQLMFADKDYER 113
Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 67/151 (44%), Gaps = 11/151 (7%)
Query: 16 RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVID 75
+V I+N +V+ V S ++ +L + L D+ V+ A +SS G + + +
Sbjct: 126 QVSIENCKEKGYSVVNVKSRDRPKLLFDTVCTLTDMQYVVFHAAVSSKGSIAVQEYFIRQ 185
Query: 76 CDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCA 135
DG + + + + Q L A R + G+ ++ +R GL S++
Sbjct: 186 MDGCTLGTESERNRVAQCLIA----AIERRVTHGL-------RLDIRIKNRLGLLSDITR 234
Query: 136 VLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
V + ++ AEI H +RA+ +VTD S
Sbjct: 235 VFRENGLSIRMAEIGIHGERASGSFYVTDVS 265
>gi|326507160|dbj|BAJ95657.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 267
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 96/165 (58%), Gaps = 10/165 (6%)
Query: 70 VFNVIDCDGKKIRDKEVIDYIQQRLETDAS--FAPSLRSSVGVMP--TEEHTSIEFTGTD 125
VF+V D +G K+ K+ I+YI+Q + T S F + + + P +T IE G +
Sbjct: 18 VFHVRDQEGNKVYSKKAINYIEQAICTRDSGRFTVTRSNELASKPDVATHYTGIEMIGHN 77
Query: 126 RPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLF 185
RPG+FSE+ AVLA+ CNV+ A W+H D A V V+D ST I DP RL++I++ L
Sbjct: 78 RPGIFSEISAVLAEQGCNVMEAHAWSHKDSLACVAFVSDESTSTRINDPDRLASIQDHLC 137
Query: 186 NVLRGY----DDFRKAKTS-LSPPGIMNR-ERRLHQIMFDDRDYE 224
VL +D R+A+ L G+ + ERRLHQ+MF +D++
Sbjct: 138 TVLGPGTSVDEDGRRARAHLLGVDGLTSHPERRLHQLMFASKDFD 182
>gi|226491840|ref|NP_001142557.1| uncharacterized protein LOC100274815 [Zea mays]
gi|195606406|gb|ACG25033.1| hypothetical protein [Zea mays]
Length = 372
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 89/185 (48%), Gaps = 13/185 (7%)
Query: 68 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 127
MDVF+V+D G K+ D + RLE+ S T +E G DRP
Sbjct: 1 MDVFHVVDAAGGKVADAGAL---LARLESSLSADALPPRPPPAAGAGTPTLLELVGADRP 57
Query: 128 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 187
GL SEV AVL DL C V+A WTH R AA+V V D TG I D R+ ++ L +V
Sbjct: 58 GLLSEVFAVLHDLRCGTVDARAWTHAGRVAALVFVRDEETGSPIDDAARVRRVESRLRHV 117
Query: 188 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQTCSMLC 247
LRG A+ + +N +RRLHQ++ +D + G D++ P T + +
Sbjct: 118 LRG--GALGARMVRADAAAVNMDRRLHQLLNEDGE-------AGSRADQAEAP-TPTAVA 167
Query: 248 FMEWS 252
+W
Sbjct: 168 VQDWG 172
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 66/161 (40%), Gaps = 24/161 (14%)
Query: 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRD---- 83
+V+ V ++ +L V+ L D++ V+ +D F + D + I
Sbjct: 177 SVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFHTDDDHARQEFYIRRLDERPISSATER 236
Query: 84 KEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCN 143
+ VI +Q +E AS E +E DR GL + V V + +
Sbjct: 237 RRVIQCLQAAIERRAS---------------EGVRLELRINDRRGLLAYVTRVFRENSLS 281
Query: 144 VVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
V +A I T D A V HVTD + A DPK TI E++
Sbjct: 282 VTHAVITTRGDMAMNVFHVTDVAGRPA--DPK---TIDEVI 317
>gi|343173273|gb|AEL99339.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 82
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 59/80 (73%)
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
G DRPGL SE+ AVLAD CNVV +E+WTHN R A+VV++TD +TG+ I DP RL+ I+
Sbjct: 1 GRDRPGLLSEIFAVLADHKCNVVASEVWTHNSRMASVVYITDEATGFPIDDPARLAHIEH 60
Query: 183 LLFNVLRGYDDFRKAKTSLS 202
LL +VL G D R A T++S
Sbjct: 61 LLLSVLMGDRDKRSANTAVS 80
>gi|343173271|gb|AEL99338.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 82
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 58/80 (72%)
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
G DRPGL SE+ AVL D CNVV +E+WTHN R A+VV++TD +TG+ I DP RL+ I+
Sbjct: 1 GRDRPGLLSEIFAVLTDHKCNVVASEVWTHNSRMASVVYITDEATGFPIDDPARLAHIEH 60
Query: 183 LLFNVLRGYDDFRKAKTSLS 202
LL +VL G D R A T++S
Sbjct: 61 LLLSVLMGDRDKRSANTAVS 80
>gi|294460772|gb|ADE75960.1| unknown [Picea sitchensis]
Length = 178
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 83/153 (54%), Gaps = 25/153 (16%)
Query: 30 IKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDY 89
+++ S NKHGILL ++QVL D +L+I KAYISSDG W MDVF+V D DG K+ D+ +ID+
Sbjct: 1 MQIQSANKHGILLDIVQVLVDFDLLISKAYISSDGVWVMDVFHVTDSDGNKVTDEGLIDH 60
Query: 90 IQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEI 149
IQQ T +E TD+ G S+ + + +V A+I
Sbjct: 61 IQQ-----------------------GTRLELCRTDQIGPLSDATRIFRENGLSVTRADI 97
Query: 150 WTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
+ +++ V +VTD + + D K + I++
Sbjct: 98 TSRDEKGVDVFYVTDVAGNFV--DSKTVEAIRQ 128
>gi|2827701|emb|CAA16674.1| predicted protein [Arabidopsis thaliana]
Length = 446
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 70/120 (58%), Gaps = 8/120 (6%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ EHT+ E TG +RPGL SE+ AVL+D+ C+V A WTH++RAA V+++ D G I
Sbjct: 98 STEHTAFEITGINRPGLLSEISAVLSDIGCHVTAAVAWTHHERAAMVIYLEDGFNGGPII 157
Query: 173 DPKRLSTIKELLFNVLRGYD--------DFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 224
DP R + +K+ L V+ + R + P G + ERRLH++M+ + DYE
Sbjct: 158 DPIRKAQVKDHLDTVMEAHHIVGDVSHVVVRVVEAKGVPVGWAHTERRLHELMYGEGDYE 217
>gi|297846572|ref|XP_002891167.1| hypothetical protein ARALYDRAFT_891163 [Arabidopsis lyrata subsp.
lyrata]
gi|297337009|gb|EFH67426.1| hypothetical protein ARALYDRAFT_891163 [Arabidopsis lyrata subsp.
lyrata]
Length = 113
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 73/113 (64%), Gaps = 11/113 (9%)
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDF 194
AVL+DL+C+VV+A++WTHN R A V+++ D S+G I D +R+S I+ L NVL +D
Sbjct: 3 AVLSDLNCDVVDAKLWTHNGRVAYVIYLRDGSSGAPILDSQRISKIEGWLKNVLNVDNDV 62
Query: 195 RK-AKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQTCSML 246
AKT +S +M+ E RLHQ+MF+ RDYER +S +P+ +M+
Sbjct: 63 NSAAKTCVSMDSMMHIEHRLHQLMFEVRDYER----------RSDKPERSAMV 105
>gi|297742910|emb|CBI35746.3| unnamed protein product [Vitis vinifera]
Length = 324
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 61/99 (61%), Gaps = 3/99 (3%)
Query: 130 FSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLR 189
SE+ AVLA+L C+V A WTHN R A ++ + D G I+DP+RL ++E L NV+
Sbjct: 1 MSEISAVLAELSCHVTAAVAWTHNSRVACIICLEDELKGGPIRDPERLVHVEEQLENVVE 60
Query: 190 G-YDDFRKAKTSLSPP--GIMNRERRLHQIMFDDRDYER 225
+ + K L+ P G + +RRLHQ+MF D+DYER
Sbjct: 61 ARHQSGERRKVRLTAPVAGRTHTDRRLHQLMFADKDYER 99
>gi|194695564|gb|ACF81866.1| unknown [Zea mays]
gi|413917413|gb|AFW57345.1| hypothetical protein ZEAMMB73_563855 [Zea mays]
gi|413917414|gb|AFW57346.1| hypothetical protein ZEAMMB73_563855 [Zea mays]
gi|413917415|gb|AFW57347.1| hypothetical protein ZEAMMB73_563855 [Zea mays]
Length = 158
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 42/69 (60%), Gaps = 15/69 (21%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DDEY K I+ MNPPRV IDN +C A VI VL ++ L++ KAYIS
Sbjct: 24 DDEYQKFIQNMNPPRVTIDNTSCPSAI---------------VIHVLTNLKLIVTKAYIS 68
Query: 62 SDGGWFMDV 70
SDGGWFMDV
Sbjct: 69 SDGGWFMDV 77
>gi|413941730|gb|AFW74379.1| hypothetical protein ZEAMMB73_033208, partial [Zea mays]
Length = 76
Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/83 (46%), Positives = 47/83 (56%), Gaps = 7/83 (8%)
Query: 68 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 127
MDVF+V D G+K+ D VI YIQQ L T A + P E T++E TG R
Sbjct: 1 MDVFHVTDRLGRKLTDASVIAYIQQSLGTWVEPAAA-------APPEGLTALELTGPGRA 53
Query: 128 GLFSEVCAVLADLHCNVVNAEIW 150
GL SEV AVLAD+ C V +A W
Sbjct: 54 GLLSEVFAVLADMQCGVADARAW 76
>gi|145355694|ref|XP_001422087.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582327|gb|ABP00404.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 218
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 86/182 (47%), Gaps = 29/182 (15%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG-GWFMDVFNV 73
P V+IDN + A ATV++V N G LL + L ++ L I K + G F V
Sbjct: 12 PIVIIDNKSDAFATVVEVSFGNYLGELLDTVAALKNLGLDINKGDVQMSGDSTKTSKFYV 71
Query: 74 IDCD-GKKIRDKEVIDYIQQRLETD------------ASFAPSLRSSVGVM--------- 111
ID + G+K+ E ++ I+Q + T+ + AP+ GV+
Sbjct: 72 IDRENGEKVTKSERLEEIRQTILTNMMAFHPEAAEYIQAKAPTRAGGEGVLGKVKKKVQT 131
Query: 112 -----PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
P H+ +E TDRPGL +V L DL VV+AE+ T D+A+ +++VT H
Sbjct: 132 GIKCAPERYHSKLEIETTDRPGLLVDVVRTLKDLSLCVVSAEVDTIGDKASDIIYVT-HK 190
Query: 167 TG 168
G
Sbjct: 191 GG 192
>gi|308813530|ref|XP_003084071.1| unnamed protein product [Ostreococcus tauri]
gi|116055954|emb|CAL58487.1| unnamed protein product [Ostreococcus tauri]
Length = 481
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 90/177 (50%), Gaps = 28/177 (15%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V+IDN + A ATV++V G L+ I L ++ L I + ++ G F V+
Sbjct: 275 PKVIIDNKSDAFATVLEVTFGTYLGELVDTIAALKNLGLDINRGEVTMGGDEKTSRFYVL 334
Query: 75 DCD-GKKIRDKEVIDYIQQRLETD--------ASF----APS-----------LRSSV-- 108
D D G+K+ E ++ I+Q + T+ A F AP+ +RS+V
Sbjct: 335 DRDTGEKVTKSERLEEIRQTVLTNMLAFHPESAEFIQAKAPTRAGANDSPLGKVRSTVET 394
Query: 109 GVMPTEE--HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT 163
G+ T E HT ++ TDRPGL +V L DL VV+AE+ T ++A ++++T
Sbjct: 395 GIKCTAEKYHTKLDIETTDRPGLLVDVVRTLKDLSLCVVSAEVDTIGNKAKDIIYIT 451
>gi|46390848|dbj|BAD16352.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 224
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 56/115 (48%), Gaps = 12/115 (10%)
Query: 67 FMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDR 126
FMDVF+V D G K+ + VI YI+Q L M E T++E TG R
Sbjct: 26 FMDVFHVTDRLGCKLTNDSVITYIEQSLGM-------WNGPTRPMALEGLTALELTGAGR 78
Query: 127 PGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
GL SEV AVLAD+ C VV W H ++ + + T D +R++ I+
Sbjct: 79 TGLISEVFAVLADMDCGVVEGRAWMHRVHLGCLIFLRNKET-----DTERMARIE 128
>gi|386287193|ref|ZP_10064368.1| PII uridylyl-transferase [gamma proteobacterium BDW918]
gi|385279725|gb|EIF43662.1| PII uridylyl-transferase [gamma proteobacterium BDW918]
Length = 889
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 22/177 (12%)
Query: 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG-GWFMDVFNVIDCDGKKIRDK- 84
AT I V + K G+ + + L ++L I+ A I + G G+ +D F V+ DG+ I D
Sbjct: 699 ATQIFVHTKAKLGLFALLAEALEQLDLSIQDARIYNSGTGYTLDTFYVLGADGESIGDNP 758
Query: 85 ----EVIDYIQQRLETDASFAPSL---------------RSSVGVMPTEEHTSIEFTGTD 125
+I+++Q+ LE F ++ R+S+ + HT +E D
Sbjct: 759 SRIAHIIEFMQEHLEHPERFPATIERRTPRQMRLFSIPTRTSMATDLNKGHTVLEVITPD 818
Query: 126 RPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
RPGL + + + + NA+I T +R V +TD + I DPK I++
Sbjct: 819 RPGLLARLARIFNQYDIRLQNAKIATLGERVEDVFFITDENQ-RPIDDPKLCEEIQQ 874
>gi|449446279|ref|XP_004140899.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Cucumis sativus]
Length = 287
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 105/213 (49%), Gaps = 35/213 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ ++AT+++V ++ G L+ ++ L D+ L + K +S++G F +
Sbjct: 81 PIVLIDQDSDSNATIVEVSFGDRLGALIDTMRALKDLGLDVAKGTVSTEGSVKQTKFYLT 140
Query: 75 DCD-GKKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEE--------HTS 118
D G+K+ D ++++ I+ + ++S ++ + G+ P E+ H
Sbjct: 141 RLDSGRKVEDPDLLESIRLTIINNLLKYHPESSQQLAMGEAFGIQPPEKKLDVDIATHVH 200
Query: 119 IEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
++ G DRPGL EV +LAD++ +V +AEI T A HV+ G
Sbjct: 201 VKADGPKRSLLYLETADRPGLLLEVIKMLADINIDVESAEIDTEGLVAKDKFHVS--YGG 258
Query: 169 YAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
A+ S++ +++ N LR Y R+ +T +
Sbjct: 259 AALN-----SSLSQVVVNCLRYY--LRRPETDI 284
>gi|449494163|ref|XP_004159466.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Cucumis sativus]
Length = 283
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 105/213 (49%), Gaps = 35/213 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ ++AT+++V ++ G L+ ++ L D+ L + K +S++G F +
Sbjct: 77 PIVLIDQDSDSNATIVEVSFGDRLGALIDTMRALKDLGLDVAKGTVSTEGSVKQTKFYLT 136
Query: 75 DCD-GKKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEE--------HTS 118
D G+K+ D ++++ I+ + ++S ++ + G+ P E+ H
Sbjct: 137 RLDSGRKVEDPDLLESIRLTIINNLLKYHPESSQQLAMGEAFGIQPPEKKLDVDIATHVH 196
Query: 119 IEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
++ G DRPGL EV +LAD++ +V +AEI T A HV+ G
Sbjct: 197 VKADGPKRSLLYLETADRPGLLLEVIKMLADINIDVESAEIDTEGLVAKDKFHVS--YGG 254
Query: 169 YAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
A+ S++ +++ N LR Y R+ +T +
Sbjct: 255 AALN-----SSLSQVVVNCLRYY--LRRPETDI 280
>gi|114707346|ref|ZP_01440243.1| PII uridylyl-transferase [Fulvimarina pelagi HTCC2506]
gi|114537227|gb|EAU40354.1| PII uridylyl-transferase [Fulvimarina pelagi HTCC2506]
Length = 964
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 59/100 (59%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P++ +DN+ TVI+V+ +++ G+L + ++D++L I+ A+IS+ G +D F V
Sbjct: 857 PKITVDNSLSNRVTVIEVEGLDRTGLLADITGAISDLSLDIRSAHISTYGEKIIDAFYVT 916
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTE 114
D G K+ + I I++RL++ A SSV MP++
Sbjct: 917 DLIGAKVTSEAKIARIERRLQSVLESAEGEVSSVNAMPSQ 956
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE G DR GL +++ ++DL ++ +A I T+ ++ +VTD G + +
Sbjct: 870 TVIEVEGLDRTGLLADITGAISDLSLDIRSAHISTYGEKIIDAFYVTD-LIGAKVTSEAK 928
Query: 177 LSTIKELLFNVL 188
++ I+ L +VL
Sbjct: 929 IARIERRLQSVL 940
>gi|28201273|dbj|BAC56782.1| unknown protein [Oryza sativa Japonica Group]
Length = 328
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 60/125 (48%), Gaps = 25/125 (20%)
Query: 67 FMDVFNVIDCDGKKIRDKEVIDYIQQ---------------RLETD--ASFAPSLRSSVG 109
FMDVF+V D G K+ + VI YI+Q R D ++ SL+S +G
Sbjct: 199 FMDVFHVTDRLGCKLTNDSVITYIEQVGGFSWWFLDSGTSVRRSWDFLMAYMASLQS-LG 257
Query: 110 V-------MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHV 162
+ M E T++E TG DR GL SEV VLAD+ C VV WTH ++ +
Sbjct: 258 MWNGPTRPMALEGLTALELTGADRTGLISEVFVVLADMDCGVVEGRTWTHRVHLGCLIFL 317
Query: 163 TDHST 167
D T
Sbjct: 318 RDEET 322
>gi|388515911|gb|AFK46017.1| unknown [Lotus japonicus]
Length = 290
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 37/205 (18%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ DATV+++ ++ G LL + L ++ L + KA + D + F +
Sbjct: 84 PVVIIDQDSDTDATVVEITFGDRLGALLDTMNALKNLGLNVVKANVYLDSSGKHNKFAIT 143
Query: 75 DCD-GKKIRDKEVID---------YIQQRLETDASFAPSLRSSVGVMPTEE--------H 116
D G+K+ D E+++ IQ E+ A A L ++ G++P +E H
Sbjct: 144 KADTGRKVDDSELLEAVRMTILNNMIQYHPESSAQLA--LGAAFGLVPPKEQVDVDIATH 201
Query: 117 TSIEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
+I G DRPGL ++ ++ D++ V + E T A A HV+
Sbjct: 202 LTISDDGPDRSLLYVETADRPGLLLDLVQIITDINIAVESGEFDTEGLLAKAKFHVS--Y 259
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGY 191
G AI P ++E+L N LR Y
Sbjct: 260 KGKAIIKP-----LQEVLANSLRYY 279
>gi|357160851|ref|XP_003578897.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Brachypodium distachyon]
Length = 271
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 101/210 (48%), Gaps = 35/210 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ DAT++++ ++ G LL ++ L D+ L + K +++D F+++
Sbjct: 67 PVVLIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVATDSSVTQTKFHIM 126
Query: 75 DCDGKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMPTEE--------HTSI 119
G+K+ D ++++ I+ + ++S ++ G+ P E+ H +
Sbjct: 127 RL-GRKVEDPDMLETIRLTIINNLLQYHPESSEKLAMGEFFGIKPPEKKVDVDVATHVIV 185
Query: 120 EFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
E G DRPGL EV ++AD++ +V +AEI T A HV+
Sbjct: 186 EDDGPKRSMLYIETADRPGLLLEVIKIIADVNIDVESAEIDTEGLVAKDKFHVS------ 239
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
+ K S++ ++L N LR Y R+ +T
Sbjct: 240 -YRGAKLNSSLSQVLVNCLRYY--LRRPET 266
>gi|255635655|gb|ACU18177.1| unknown [Glycine max]
Length = 245
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 157 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQI 216
A+VV++TD +TG +I DP RL+ IK+LL VL+G D + A T++S G +++RRLHQ+
Sbjct: 2 ASVVYITDEATGLSIDDPDRLAKIKQLLLYVLKGDIDKKSANTAVS-VGSTHKDRRLHQL 60
Query: 217 MF 218
M+
Sbjct: 61 MY 62
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 65/154 (42%), Gaps = 11/154 (7%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
N V +D+ TV+ + ++ +L + L D+ V+ + ++G +
Sbjct: 81 NKLLVTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHGTVIAEGPEAYQEYY 140
Query: 73 VIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSE 132
+ DG I + +QR+ A R+S G+ +E G DR GL S+
Sbjct: 141 IRHVDGSPISSEAE----RQRVIHCLEAAVRRRTSEGI-------KLELCGEDRVGLLSD 189
Query: 133 VCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
V + + +V AE+ T +A V +VTD S
Sbjct: 190 VTRIFRENGLSVNRAEVTTRGSQAMNVFYVTDVS 223
>gi|339018851|ref|ZP_08644974.1| uridylyltransferase PII [Acetobacter tropicalis NBRC 101654]
gi|338752065|dbj|GAA08278.1| uridylyltransferase PII [Acetobacter tropicalis NBRC 101654]
Length = 983
Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 50/81 (61%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRVVIDN TVI+++ ++ G+L V +++ NL I A+I++ G +DVF V
Sbjct: 882 PPRVVIDNGASNTYTVIEINGRDRPGLLHDVTAAMSEENLQIASAHITTYGVRAVDVFYV 941
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G KI DK+ +D I+ RL
Sbjct: 942 KDLFGLKITDKKRLDEIRDRL 962
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ +T IE G DRPGL +V A +++ + + +A I T+ RA V +V D G I
Sbjct: 892 SNTYTVIEINGRDRPGLLHDVTAAMSEENLQIASAHITTYGVRAVDVFYVKD-LFGLKIT 950
Query: 173 DPKRLSTIKELLFNVL 188
D KRL I++ L + +
Sbjct: 951 DKKRLDEIRDRLLSCM 966
>gi|254507884|ref|ZP_05120014.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus 16]
gi|219549257|gb|EED26252.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus 16]
Length = 711
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 18/172 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P ++I T + V S ++H + V+ L+ N + A + +S G+ +D F V
Sbjct: 517 PLILISKKATRGGTEVFVYSKDQHALFATVVAELDRRNFNVHDAQVMTSKDGYVLDTFMV 576
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE--EH 116
+D G+ + R K VI ++ L+ P ++++ V +PT+ +
Sbjct: 577 LDQHGEVVDESRHKAVIKHLTHVLQDGRPTKIKTRRVPRNLQHFTVKTQVDFLPTKSKKR 636
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +EF D PGL + V A ADLH ++ A+I T +RA + +T + G
Sbjct: 637 TLMEFVALDTPGLLATVGATFADLHVHLHAAKITTIGERAEDLFIITSENGG 688
>gi|356523245|ref|XP_003530251.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Glycine max]
Length = 291
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 37/205 (18%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ DATV+++ ++ G LL + L ++ L + KA + D + F++
Sbjct: 85 PVVIIDQDSDPDATVVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFSIT 144
Query: 75 DCD-GKKIRDKEVID---------YIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT-- 122
D G+K+ + E+++ IQ E+ + A L ++ G++P +E ++
Sbjct: 145 KADTGRKVEEPELLEAIRLTIINNLIQYHPESSSQLA--LGAAFGLLPPKEQVDVDIATH 202
Query: 123 ----------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
DRPGL ++ ++ D++ V + E T A A HV+ +
Sbjct: 203 INISDDGPDRSMLYVETADRPGLLVDLVKIITDINIAVESGEFDTEGLLAKAKFHVSYN- 261
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGY 191
G AI P ++++L N LR +
Sbjct: 262 -GKAISKP-----LQQVLANSLRYF 280
>gi|224284356|gb|ACN39913.1| unknown [Picea sitchensis]
Length = 306
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 37/205 (18%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V ID ++ +ATV++V ++ G LL ++ L D+ L + KA + D + F++
Sbjct: 100 PKVAIDQDSDPNATVVEVTFGDRLGALLDTMEALRDLGLNVVKANVFLDSSGKHNTFSIT 159
Query: 75 DCD-GKKIRDKEVIDYIQQRL---------ETDASFAPSLRSSVGVMPTEEHTSIEFT-- 122
D G+K+ D E ++ I+ + E+ A A + + G++P +E ++ +
Sbjct: 160 RADTGRKVDDPEALEQIRLTIINNLLKYHPESSAQLA--MGEAFGIVPPKEKPDVDISTR 217
Query: 123 ----------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
DRPGL E+ L+D+ V + E T A A HV+
Sbjct: 218 IHIYDDGPNRSLLSIETADRPGLLVEIVKTLSDISVAVESGEFDTEGLLAKAKFHVSYR- 276
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGY 191
G A+ P +++++ N LR +
Sbjct: 277 -GSALIKP-----LQQVVANSLRYF 295
Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +E T DR G + L DL NVV A ++ + +T TG + DP+
Sbjct: 113 TVVEVTFGDRLGALLDTMEALRDLGLNVVKANVFLDSSGKHNTFSITRADTGRKVDDPEA 172
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSL 201
L I+ + N L Y A+ ++
Sbjct: 173 LEQIRLTIINNLLKYHPESSAQLAM 197
>gi|329114652|ref|ZP_08243411.1| uridylyltransferase [Acetobacter pomorum DM001]
gi|326696132|gb|EGE47814.1| uridylyltransferase [Acetobacter pomorum DM001]
Length = 996
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRVVIDN TVI+++ ++ G+L V ++ NL I A+I++ G +DVF V
Sbjct: 895 PPRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYV 954
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G KI DK+ ++ I++RL
Sbjct: 955 KDLFGLKITDKKRLEEIRERL 975
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 87/213 (40%), Gaps = 29/213 (13%)
Query: 5 YAKLIRRMN----PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+A+LIR + P V + T + + +V+ G+ ++ L I A I
Sbjct: 769 HARLIRAADAKDAPLTVEVLPLPARGVTEVTIYTVDVPGLFSKIAGALALAGASIVDARI 828
Query: 61 SS-DGGWFMDVFNVIDCDGKKIRDKE----VIDYIQQRLETDASFAPSL-RSSVGVMP-- 112
+ G +D F + D G+ + + I+Q L + + R+ G MP
Sbjct: 829 HTMTHGMALDTFWIQDTSGQAYEETHKLARLASLIEQGLSGHIDISEEIARAGFGHMPMR 888
Query: 113 ----------------TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+ +T IE G DRPGL +V A ++ + + +A I T+ RA
Sbjct: 889 MRAIHVPPRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRA 948
Query: 157 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLR 189
V +V D G I D KRL I+E L L+
Sbjct: 949 VDVFYVKD-LFGLKITDKKRLEEIRERLLAGLK 980
>gi|421853162|ref|ZP_16285841.1| uridylyltransferase PII [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
gi|371478622|dbj|GAB31044.1| uridylyltransferase PII [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
Length = 996
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRVVIDN TVI+++ ++ G+L V ++ NL I A+I++ G +DVF V
Sbjct: 895 PPRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYV 954
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G KI DK+ ++ I++RL
Sbjct: 955 KDLFGLKITDKKRLEEIRERL 975
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 87/213 (40%), Gaps = 29/213 (13%)
Query: 5 YAKLIRRMN----PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+A+LIR + P V + T + + +V+ G+ ++ L I A I
Sbjct: 769 HARLIRAADAKDAPLTVEVLPLPARGVTEVTIYTVDVPGLFSKIAGALALAGASIVDARI 828
Query: 61 SS-DGGWFMDVFNVIDCDGKKIRDKE----VIDYIQQRLETDASFAPSL-RSSVGVMP-- 112
+ G +D F + D G+ + + I+Q L + + R+ G MP
Sbjct: 829 HTMTHGMALDTFWIQDTSGQAYEETHKLARLASLIEQGLSGHIDISEEIARAGFGHMPMR 888
Query: 113 ----------------TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+ +T IE G DRPGL +V A ++ + + +A I T+ RA
Sbjct: 889 MRAIHVPPRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRA 948
Query: 157 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLR 189
V +V D G I D KRL I+E L L+
Sbjct: 949 VDVFYVKD-LFGLKITDKKRLEEIRERLLAGLK 980
>gi|421849578|ref|ZP_16282556.1| uridylyltransferase PII [Acetobacter pasteurianus NBRC 101655]
gi|371459639|dbj|GAB27759.1| uridylyltransferase PII [Acetobacter pasteurianus NBRC 101655]
Length = 996
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRVVIDN TVI+++ ++ G+L V ++ NL I A+I++ G +DVF V
Sbjct: 895 PPRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYV 954
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G KI DK+ ++ I++RL
Sbjct: 955 KDLFGLKITDKKRLEEIRERL 975
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 87/213 (40%), Gaps = 29/213 (13%)
Query: 5 YAKLIRRMN----PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+A+LIR + P V + T + + +V+ G+ ++ L I A I
Sbjct: 769 HARLIRAADAKDAPLTVEVLPLPARGVTEVTIYTVDVPGLFSKIAGALALAGASIVDARI 828
Query: 61 SS-DGGWFMDVFNVIDCDGKKIRDKE----VIDYIQQRLETDASFAPSL-RSSVGVMP-- 112
+ G +D F + D G+ + + I+Q L + + R+ G MP
Sbjct: 829 HTMTHGMALDTFWIQDTSGQAYEETHKLARLASLIEQGLSGHIDISEEIARAGFGHMPMR 888
Query: 113 ----------------TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+ +T IE G DRPGL +V A ++ + + +A I T+ RA
Sbjct: 889 MRAIHVPPRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRA 948
Query: 157 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLR 189
V +V D G I D KRL I+E L L+
Sbjct: 949 VDVFYVKD-LFGLKITDKKRLEEIRERLLAGLK 980
>gi|340778936|ref|ZP_08698879.1| PII uridylyl-transferase [Acetobacter aceti NBRC 14818]
Length = 988
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRVVIDN TVI+++ ++ G+L V LN++ L I A+I++ G +DVF V
Sbjct: 882 PPRVVIDNRASNSHTVIEINGRDRPGLLHDVASALNEMRLQIYSAHITTYGVRAVDVFYV 941
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ D+ + I+ RL
Sbjct: 942 KDLSGMKVTDENRLKKIRDRL 962
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ HT IE G DRPGL +V + L ++ + +A I T+ RA V +V D S G +
Sbjct: 892 SNSHTVIEINGRDRPGLLHDVASALNEMRLQIYSAHITTYGVRAVDVFYVKDLS-GMKVT 950
Query: 173 DPKRLSTIKELLFNVLR 189
D RL I++ L L+
Sbjct: 951 DENRLKKIRDRLMAGLK 967
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+P T + D PGLF+++ +A ++V+A I T ++ A +TG A
Sbjct: 776 LPARGVTEVTIHTQDHPGLFAQIAGAMALAGASIVDARIHTLSNGMALDTLWIQDATGEA 835
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRK--AKTSLSPPGIMNRERRLH---QIMFDDR 221
+P RL+ + + L G D AKT+ S +++R R +H +++ D+R
Sbjct: 836 FDEPHRLTKLFSITERALSGRLDIATEIAKTNASGQ-LLSRTRAIHVPPRVVIDNR 890
>gi|258542748|ref|YP_003188181.1| PII uridylyl-transferase [Acetobacter pasteurianus IFO 3283-01]
gi|384042669|ref|YP_005481413.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-12]
gi|384051186|ref|YP_005478249.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-03]
gi|384054294|ref|YP_005487388.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-07]
gi|384057528|ref|YP_005490195.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-22]
gi|384060169|ref|YP_005499297.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-26]
gi|384063461|ref|YP_005484103.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-32]
gi|384119471|ref|YP_005502095.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256633826|dbj|BAH99801.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-01]
gi|256636885|dbj|BAI02854.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-03]
gi|256639938|dbj|BAI05900.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-07]
gi|256642994|dbj|BAI08949.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-22]
gi|256646049|dbj|BAI11997.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-26]
gi|256649102|dbj|BAI15043.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-32]
gi|256652089|dbj|BAI18023.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256655146|dbj|BAI21073.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-12]
Length = 996
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRVVIDN TVI+++ ++ G+L V ++ NL I A+I++ G +DVF V
Sbjct: 895 PPRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYV 954
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G KI DK+ ++ I++RL
Sbjct: 955 KDLFGLKITDKKRLEEIRERL 975
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 87/213 (40%), Gaps = 29/213 (13%)
Query: 5 YAKLIRRMN----PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+A+LIR + P V + T + + +V+ G+ ++ L I A I
Sbjct: 769 HARLIRAADAKDAPLTVEVLPLPARGVTEVTIYTVDVPGLFSKIAGALALAGASIVDARI 828
Query: 61 SS-DGGWFMDVFNVIDCDGKKIRDKE----VIDYIQQRLETDASFAPSL-RSSVGVMP-- 112
+ G +D F + D G+ + + I+Q L + + R+ G MP
Sbjct: 829 HTMTHGMALDTFWIQDTSGQAYEETHKLARLASLIEQGLSGHIDISEEIARAGFGHMPMR 888
Query: 113 ----------------TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+ +T IE G DRPGL +V A ++ + + +A I T+ RA
Sbjct: 889 MRAIHVPPRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRA 948
Query: 157 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLR 189
V +V D G I D KRL I+E L L+
Sbjct: 949 VDVFYVKD-LFGLKITDKKRLEEIRERLLAGLK 980
>gi|347761851|ref|YP_004869412.1| uridylyltransferase PII [Gluconacetobacter xylinus NBRC 3288]
gi|347580821|dbj|BAK85042.1| uridylyltransferase PII [Gluconacetobacter xylinus NBRC 3288]
Length = 965
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 10 RRMN----PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
RRM PPRVVIDN TV++++ ++ G+L V L++ L I A+I++ G
Sbjct: 854 RRMRAIHVPPRVVIDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGV 913
Query: 66 WFMDVFNVIDCDGKKIRDKEVIDYIQQRLET---DASFAPSLRSS 107
+DVF V D G KI DKE +D ++ L +A A RSS
Sbjct: 914 RAVDVFYVKDLFGLKITDKERLDRVRTTLLAGLQEAEAAAQRRSS 958
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +E G DRPGL +V A L++ + +A I T+ RA V +V D G I D +R
Sbjct: 876 TVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGVRAVDVFYVKD-LFGLKITDKER 934
Query: 177 LSTIKELLFNVLR 189
L ++ L L+
Sbjct: 935 LDRVRTTLLAGLQ 947
>gi|356557247|ref|XP_003546929.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Glycine max]
Length = 289
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 94/213 (44%), Gaps = 39/213 (18%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ DATV+++ ++ G LL + L ++ L + KA + D + F++
Sbjct: 83 PVVIIDQDSDPDATVVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFSIT 142
Query: 75 DCD-GKKIRDKEVID---------YIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT-- 122
D G+K+ D E+++ IQ E+ A A L ++ G++P +E +E
Sbjct: 143 KADSGRKVEDPELLEAIRLTILNNMIQYHPESSAQLA--LGAAFGLVPPKEQVDVEIATQ 200
Query: 123 ----------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
DRPGL ++ + D++ V + E T A A HV
Sbjct: 201 ITISDDGPKRSLLYVETADRPGLLVDLVKTITDINIAVESGEFDTEGLLAKAKFHVN--- 257
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
KD + ++ +L N LR + R+ +T
Sbjct: 258 ----YKDKALIKPLQLVLVNSLRYF--LRRPET 284
>gi|297844622|ref|XP_002890192.1| hypothetical protein ARALYDRAFT_471888 [Arabidopsis lyrata subsp.
lyrata]
gi|297336034|gb|EFH66451.1| hypothetical protein ARALYDRAFT_471888 [Arabidopsis lyrata subsp.
lyrata]
Length = 290
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 33/203 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ DATV++V ++ G LL + L ++ L + KA + D + F +
Sbjct: 84 PVVIIDQDSDPDATVLEVTFGDRLGALLDTMNALKNLGLNVVKANVYLDSSGKHNKFAIT 143
Query: 75 DCD-GKKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEE--------HTS 118
D G+K+ D E+++ I+ ++S ++ ++ GV+P E H +
Sbjct: 144 KADSGRKVEDPELLEAIRLTVINNLLEFHPESSSQLAMGAAFGVLPPTEPIDVDIATHIT 203
Query: 119 IEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
IE G DRPGL E+ +++D+ V + E T A HV+
Sbjct: 204 IEDDGPNRSLLYIETADRPGLLVELVKIISDISVAVESGEFDTEGLLAKVKFHVS----- 258
Query: 169 YAIKDPKRLSTIKELLFNVLRGY 191
++ + ++++L N LR +
Sbjct: 259 --YRNKALIKPLQQVLANSLRYF 279
>gi|312883806|ref|ZP_07743525.1| PII uridylyl-transferase [Vibrio caribbenthicus ATCC BAA-2122]
gi|309368555|gb|EFP96088.1| PII uridylyl-transferase [Vibrio caribbenthicus ATCC BAA-2122]
Length = 877
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 83/172 (48%), Gaps = 18/172 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ N T + V S ++ + +V+ LN NL + A + +S G+ +D F V
Sbjct: 677 PLVLVSKNATRGGTEVFVYSKDQQALFARVVAELNRRNLNVHDAQVMTSKDGFILDTFMV 736
Query: 74 IDCDGKKI---RDKEVIDYIQQRL------ETDASFAPS------LRSSVGVMPT--EEH 116
+D GK + R + ++ I + L + A AP +++ +PT ++H
Sbjct: 737 LDNKGKALEANRQQTIVKNITKALADSKPLKIKARRAPKNLQHFKVKTRAEFLPTKHQKH 796
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ +EF D PGL +++ A ++L ++ A+I T +RA + +T G
Sbjct: 797 SLLEFIALDTPGLLAKIGATFSELGIHLHAAKITTIGERAEDLFIITGEEKG 848
>gi|90420550|ref|ZP_01228457.1| protein-P-II uridylyltransferase [Aurantimonas manganoxydans
SI85-9A1]
gi|90335278|gb|EAS49031.1| protein-P-II uridylyltransferase [Aurantimonas manganoxydans
SI85-9A1]
Length = 943
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV +DN TVI+V+ +++ G+L V ++D+NL I+ A+IS+ G +DVF V
Sbjct: 836 PRVSVDNTLSNQLTVIEVEGLDRPGLLSDVTGAISDLNLDIRSAHISTYGEKVVDVFYVT 895
Query: 75 DCDGKKIRDKEVIDYIQQRLE 95
D G KI + I+ I+ RL+
Sbjct: 896 DLIGTKITSETRIERIEVRLK 916
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 7/112 (6%)
Query: 100 FAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAV 159
FA R SV + + T IE G DRPGL S+V ++DL+ ++ +A I T+ ++ V
Sbjct: 832 FAVKPRVSVDNTLSNQLTVIEVEGLDRPGLLSDVTGAISDLNLDIRSAHISTYGEKVVDV 891
Query: 160 VHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRER 211
+VTD G I R+ I+ L V F + +S P +M+ +R
Sbjct: 892 FYVTD-LIGTKITSETRIERIEVRLKRV------FESPEGEMSSPVVMSSQR 936
>gi|388516485|gb|AFK46304.1| unknown [Medicago truncatula]
Length = 293
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 37/205 (18%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID + DATV+++ ++ G LL ++ L D+ L + KA + D + F++
Sbjct: 87 PIVIIDQDLDPDATVVEITFGDRLGALLDTMRALKDLGLNVVKANVFLDSSGKHNKFSIT 146
Query: 75 DCD-GKKIRDKEVID---------YIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT-- 122
D G+K+ D E+++ IQ E+ + A + ++ G++P +E ++
Sbjct: 147 KADTGRKVEDPELLEAIRLTIINNLIQYHPESSSQLA--MGAAFGLLPPKEQVDVDIATH 204
Query: 123 ----------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
DRPGL ++ + D+ V + E T A A HV+
Sbjct: 205 INISDDGPDRSLFYVETADRPGLLVDLVKSITDIDIAVESGEFDTEGLLAKAKFHVS--Y 262
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGY 191
G AI P ++++L N LR +
Sbjct: 263 KGKAISKP-----LQQVLANSLRYF 282
>gi|357467939|ref|XP_003604254.1| hypothetical protein MTR_4g007140 [Medicago truncatula]
gi|355505309|gb|AES86451.1| hypothetical protein MTR_4g007140 [Medicago truncatula]
Length = 293
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 37/205 (18%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID + DATV+++ ++ G LL ++ L D+ L + KA + D + F++
Sbjct: 87 PIVIIDQDLDPDATVVEITFGDRLGALLDTMRALKDLGLNVVKANVFLDSSGKHNKFSIT 146
Query: 75 DCD-GKKIRDKEVID---------YIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT-- 122
D G+K+ D E+++ IQ E+ + A + ++ G++P +E ++
Sbjct: 147 KADTGRKVEDPELLEAIRLTIINNLIQYHPESSSQLA--MGAAFGLLPPKEQVDVDIATH 204
Query: 123 ----------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
DRPGL ++ + D+ V + E T A A HV+
Sbjct: 205 INISDDGPDRSLFYVETADRPGLLVDLVKSITDIDIAVESGEFDTEGLLAKAKFHVS--Y 262
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGY 191
G AI P ++++L N LR +
Sbjct: 263 KGKAISKP-----LQQVLANSLRYF 282
>gi|359780511|ref|ZP_09283737.1| PII uridylyl-transferase [Pseudomonas psychrotolerans L19]
gi|359371823|gb|EHK72388.1| PII uridylyl-transferase [Pseudomonas psychrotolerans L19]
Length = 899
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCADA---TVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T D+ T I + + ++H + V++ +NL I+ A I+S + +D
Sbjct: 689 PLVLIRETTQRDSEGGTQIFIYAADQHDFFAVTVAVMDQLNLNIQDARIITSTSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-------------------KEVIDYIQQRLETDA---SFAPSLRSSV 108
+ V+D DG I + +E I +R+ +F+P +
Sbjct: 749 YIVLDTDGGSIGNNPARIAQIRGGLIEALKHPEEYPSIINRRVTRQLKHFAFSPQVNIYT 808
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
M + + IE T DRPGL + V + D +V+NA+I T +R V +VTD + G
Sbjct: 809 DTMRSA--SLIELTAPDRPGLLARVGRIFLDFDLSVLNAKIATLGERVEDVFYVTD-ADG 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S ++ L L
Sbjct: 866 RPLADPGLCSALQHALIKQL 885
>gi|18394414|ref|NP_564010.1| uridylyltransferase-related protein [Arabidopsis thaliana]
gi|9802776|gb|AAF99845.1|AC051629_12 Unknown protein [Arabidopsis thaliana]
gi|14423502|gb|AAK62433.1|AF386988_1 Unknown protein [Arabidopsis thaliana]
gi|30023784|gb|AAP13425.1| At1g16880 [Arabidopsis thaliana]
gi|332191392|gb|AEE29513.1| uridylyltransferase-related protein [Arabidopsis thaliana]
gi|347949478|gb|AEP31952.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 290
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 33/203 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ DATV++V ++ G LL + L ++ L + KA + D + F +
Sbjct: 84 PVVIIDQDSDPDATVLEVTFGDRLGALLDTMNALKNLGLNVVKANVYLDSSGKHNKFAIT 143
Query: 75 DCD-GKKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEE--------HTS 118
D G+K+ D E+++ I+ ++S ++ ++ GV+P E H +
Sbjct: 144 RADSGRKVEDPELLEAIRLTVINNLLEFHPESSSQLAMGAAFGVLPPTEPIDVDIATHIT 203
Query: 119 IEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
IE G DRPGL E+ +++D+ V + E T A HV+
Sbjct: 204 IEDDGPDRSLLFIESADRPGLLVELVKIISDISVAVESGEFDTEGLLAKVKFHVS----- 258
Query: 169 YAIKDPKRLSTIKELLFNVLRGY 191
++ + ++++L N LR +
Sbjct: 259 --YRNKALIKPLQQVLANSLRYF 279
>gi|358249276|ref|NP_001240278.1| uncharacterized protein LOC100803191 [Glycine max]
gi|255644481|gb|ACU22744.1| unknown [Glycine max]
Length = 294
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 37/205 (18%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ DATV+++ ++ G LL + L ++ L + KA + D + F++
Sbjct: 88 PVVIIDQDSDPDATVVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFSIT 147
Query: 75 DCD-GKKIRDKEVID---------YIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT-- 122
D G+K+ + E+++ IQ E+ + A L ++ G++P +E ++
Sbjct: 148 KADTGRKVEEPELLEAIRLTIINNLIQYHPESSSRLA--LGAAFGLLPPKEQVDVDIATH 205
Query: 123 ----------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
DRPGL ++ ++ D++ V + E T A A HV+ +
Sbjct: 206 INISDDCPDRSLLYVETADRPGLLVDLVKIITDINIAVESGEFDTEGLLAKAKFHVSYN- 264
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGY 191
G AI P ++++L N LR +
Sbjct: 265 -GKAISKP-----LQQVLANSLRYF 283
>gi|343513795|ref|ZP_08750890.1| PII uridylyl-transferase [Vibrio sp. N418]
gi|342801414|gb|EGU36880.1| PII uridylyl-transferase [Vibrio sp. N418]
Length = 874
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 20/192 (10%)
Query: 6 AKLIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SS 62
+ L+R +P P V+I T + V ++H + V+ L+ N + A + +S
Sbjct: 668 SHLLRHDDPSKPLVLISEKATRGGTEVFVYHKDQHALFATVVAELDRRNFNVHDAQVMTS 727
Query: 63 DGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSS 107
G+ +D F V+D G I R K VI ++ L+ P ++++
Sbjct: 728 KDGYVLDTFMVLDQHGDAIEVGRHKAVIKHLTHVLQDGRPTKIRTRRTPRNLQHFTVKTK 787
Query: 108 VGVMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 165
V +P++ + T++EF D PGL + V A ADL+ N+ A+I T +RA + +T
Sbjct: 788 VDFLPSKSKKRTTLEFVALDTPGLLATVGATFADLNINLHAAKITTIGERAEDLFIITGT 847
Query: 166 STGYAIKDPKRL 177
G + K L
Sbjct: 848 EGGKLSEQEKSL 859
>gi|356575488|ref|XP_003555872.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Glycine max]
Length = 282
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 33/203 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID + ++AT++++ N+ G LL ++ L D+ L + K +S++G F +
Sbjct: 76 PIVLIDQESDSEATIVQLSFGNRLGALLDTMKALKDLGLDVSKGTVSTEGLVKQTKFFIT 135
Query: 75 DCD-GKKIRDKEVIDYIQ---------------QRLETDASF---APS------LRSSVG 109
D G+K+ D ++++ I+ + L F AP +++ +
Sbjct: 136 QSDTGRKVEDPDMLERIRLTIINNLLKYHPESSELLAMGEVFGIKAPKKKLDDDIKTRIQ 195
Query: 110 VMPTEEHTSIEFTGT-DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
V S+ + T DRPGL E+ V+AD++ +V +AEI T A HV+ G
Sbjct: 196 VKEDGPKRSLLYIETADRPGLLVEIIKVIADVNIDVESAEIDTEGLVAKDTFHVS--YGG 253
Query: 169 YAIKDPKRLSTIKELLFNVLRGY 191
A+ S++ ++L N LR Y
Sbjct: 254 AALN-----SSMSQVLVNCLRYY 271
>gi|330993434|ref|ZP_08317369.1| [Protein-PII] uridylyltransferase [Gluconacetobacter sp. SXCC-1]
gi|329759464|gb|EGG75973.1| [Protein-PII] uridylyltransferase [Gluconacetobacter sp. SXCC-1]
Length = 911
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 10 RRMN----PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
RRM PPRVVIDN TV++++ ++ G+L + L++ L I A+I++ G
Sbjct: 800 RRMRAIHVPPRVVIDNRASNTCTVVEINGRDRPGLLHDITAALSEQKLQIASAHITTYGV 859
Query: 66 WFMDVFNVIDCDGKKIRDKEVIDYIQQRLET---DASFAPSLRSS 107
+DVF V D G KI D+E +D I+ L +A A RSS
Sbjct: 860 RAVDVFYVKDLFGLKITDRERLDRIRTTLLAGLQEAEAAAQRRSS 904
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +E G DRPGL ++ A L++ + +A I T+ RA V +V D G I D +R
Sbjct: 822 TVVEINGRDRPGLLHDITAALSEQKLQIASAHITTYGVRAVDVFYVKD-LFGLKITDRER 880
Query: 177 LSTIKELLFNVLR 189
L I+ L L+
Sbjct: 881 LDRIRTTLLAGLQ 893
>gi|116786655|gb|ABK24191.1| unknown [Picea sitchensis]
gi|148908416|gb|ABR17321.1| unknown [Picea sitchensis]
Length = 306
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 37/205 (18%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V ID ++ +ATV++V ++ G LL + L D+ L + KA + D + F++
Sbjct: 100 PKVAIDQDSDPNATVVEVTFGDRLGALLDTMGALRDLGLNVVKANVFLDSSGKHNTFSIT 159
Query: 75 DCD-GKKIRDKEVIDYIQQRL---------ETDASFAPSLRSSVGVMPTEEHTSIEFT-- 122
D G+K+ D E ++ I+ + E+ A A + + G++P +E ++ +
Sbjct: 160 RADTGRKVDDPEALEQIRLTIINNLLKYHPESSAQLA--MGEAFGIVPPKEKPDVDISTR 217
Query: 123 ----------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
DRPGL E+ L+D+ V + E T A A HV+
Sbjct: 218 IHIYDDGPNRSLLSIETADRPGLLVEIVKTLSDISVAVESGEFDTEGLLAKAKFHVSYR- 276
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGY 191
G A+ P +++++ N LR +
Sbjct: 277 -GSALIKP-----LQQVVANSLRYF 295
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +E T DR G + L DL NVV A ++ + +T TG + DP+
Sbjct: 113 TVVEVTFGDRLGALLDTMGALRDLGLNVVKANVFLDSSGKHNTFSITRADTGRKVDDPEA 172
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSL 201
L I+ + N L Y A+ ++
Sbjct: 173 LEQIRLTIINNLLKYHPESSAQLAM 197
>gi|357503663|ref|XP_003622120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497135|gb|AES78338.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 31/39 (79%)
Query: 126 RPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+PGL E+ A L +LHCNVV AE+WTHND+A VVHVT+
Sbjct: 854 KPGLRYEIPAFLTELHCNVVAAEMWTHNDKAETVVHVTN 892
>gi|255564051|ref|XP_002523024.1| amino acid binding protein, putative [Ricinus communis]
gi|223537746|gb|EEF39366.1| amino acid binding protein, putative [Ricinus communis]
Length = 282
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 33/203 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V+ID ++ DATV+++ ++ G LL + L ++ L + KA + D + F++
Sbjct: 76 PKVIIDQDSDPDATVVEITFGDRLGALLDTMNALRNLGLNVTKANVFLDSSGKHNTFSIT 135
Query: 75 DCD-GKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMPTEE--------HTS 118
D G+K+ D E+++ I+ + ++S ++ + GV P ++ H S
Sbjct: 136 KADTGRKVEDPELLEAIRLTIINNLLQYHPESSSQLAMGVAFGVEPPKQQVDVDIATHIS 195
Query: 119 IEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ G DRPGL ++ ++ D++ V + E T A A HV+ G
Sbjct: 196 VYDDGPDRSLLFVETADRPGLLVDLVKIITDINVAVDSGEFDTEGLLAKAKFHVS--YKG 253
Query: 169 YAIKDPKRLSTIKELLFNVLRGY 191
AI P ++++L N LR +
Sbjct: 254 KAIIKP-----LQQVLANSLRYF 271
>gi|356550663|ref|XP_003543704.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Glycine max]
Length = 290
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 95/213 (44%), Gaps = 39/213 (18%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ DATV+++ ++ G LL + L ++ L + KA + D + F++
Sbjct: 84 PVVIIDQDSDPDATVVEITFGDRLGALLDTMNALRNLGLNVVKANVFLDSSGKHNKFSIT 143
Query: 75 DCD-GKKIRDKEVID---------YIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFT-- 122
D G+K+ D E+++ IQ E+ A A L ++ G++ +E +E
Sbjct: 144 KADSGRKVEDPELLEAIRLTILNNMIQYHPESSAQLA--LGAAFGLVTPKEQVDVEIATH 201
Query: 123 ----------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
DRPGL ++ ++ D++ V + E T A A HV
Sbjct: 202 ITISDDGPKRSLLYVETADRPGLLVDLVKIITDINIAVESGEFDTEGLLAKAKFHVN--- 258
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
KD + ++++L N LR + R+ +T
Sbjct: 259 ----YKDKALIKPLQQVLVNSLRYF--LRRPET 285
>gi|427431046|ref|ZP_18920742.1| [Protein-PII] uridylyltransferase [Caenispirillum salinarum AK4]
gi|425878223|gb|EKV26942.1| [Protein-PII] uridylyltransferase [Caenispirillum salinarum AK4]
Length = 926
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 28/213 (13%)
Query: 5 YAKLIRRMNPPRVVIDNNTCAD----ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+A+LIR ++ + C D T + + + + G+ ++ ++ + I A I
Sbjct: 700 HAELIRDAEAAGRLLTVDVCTDEIRGVTDVTIYTADHPGLFSKITGAMSLSGVTIVDAKI 759
Query: 61 SS-DGGWFMDVFNVIDCDGKKIRDKEVID--------------YIQQRLETDASFAPSLR 105
+ G +DVF+V D DG + D++ +D ++++ L S PS
Sbjct: 760 MTLTTGMALDVFSVQDNDGTAVTDEDKLDRLARIIENALSGKIWLEKELAAKPSGLPSRT 819
Query: 106 SSVGVMP--------TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAA 157
V P ++ +T IE G DRPG +V A L + +A++ T +R
Sbjct: 820 RVFKVPPRVVVDNTASKTYTVIEVNGRDRPGFLYDVTAALTRCGLQIHSAQVTTFGERVV 879
Query: 158 AVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRG 190
V +V D G I+ +L ++E L + L G
Sbjct: 880 DVFYVKD-VFGMKIEHEGKLKQVRETLMDTLNG 911
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T + D PGLFS++ ++ +V+A+I T A V + G A+ D +
Sbjct: 727 TDVTIYTADHPGLFSKITGAMSLSGVTIVDAKIMTLTTGMALDVFSVQDNDGTAVTDEDK 786
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRER 211
L + ++ N L G K + + P G+ +R R
Sbjct: 787 LDRLARIIENALSGKIWLEK-ELAAKPSGLPSRTR 820
>gi|67633328|gb|AAY78579.1| uridylyltransferase [uncultured bacterium MedeBAC82F10]
Length = 851
Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PR+ IDN AT ++ S ++ G+L+ ++Q+ +D N+ ++ A IS+ G D+F +
Sbjct: 767 PRITIDNQMSKLATTFQILSGDRQGLLMDILQIFHDQNMSVQSAKISTYGEKVFDIFQIT 826
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D KK++D + + ++ +L
Sbjct: 827 DLKNKKVKDTKTLKTLEDQL 846
>gi|343509231|ref|ZP_08746516.1| PII uridylyl-transferase [Vibrio scophthalmi LMG 19158]
gi|342805298|gb|EGU40574.1| PII uridylyl-transferase [Vibrio scophthalmi LMG 19158]
Length = 874
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 20/192 (10%)
Query: 6 AKLIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SS 62
+ L+R +P P V+I T + V ++H + V+ L+ N + A + +S
Sbjct: 668 SHLLRHDDPSKPLVLISEKATRGGTEVFVYHKDQHALFATVVAELDRRNFNVHDAQVMTS 727
Query: 63 DGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSS 107
G+ +D F V+D G I R K VI ++ L+ P +++
Sbjct: 728 KDGYVLDTFMVLDQHGDAIEVGRHKAVIKHLTHVLQDGRPTKIRTRRTPRNLQHFKVKTK 787
Query: 108 VGVMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 165
V +P++ + T++EF D PGL + V A ADL+ N+ A+I T +RA + +T
Sbjct: 788 VDFLPSKSKKRTTLEFVALDTPGLLATVGATFADLNINLHAAKITTIGERAEDLFIITGT 847
Query: 166 STGYAIKDPKRL 177
G + K L
Sbjct: 848 EGGKLSEQEKSL 859
>gi|242084772|ref|XP_002442811.1| hypothetical protein SORBIDRAFT_08g003250 [Sorghum bicolor]
gi|241943504|gb|EES16649.1| hypothetical protein SORBIDRAFT_08g003250 [Sorghum bicolor]
Length = 273
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 96/210 (45%), Gaps = 35/210 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ID ++ DAT++++ ++ G LL ++ L D+ L + K +++D F+++
Sbjct: 69 PVVQIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVTTDSAVTQTKFHIM 128
Query: 75 DCDGKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMPTEEHTSIEFTG---- 123
G+K+ D ++++ I+ + ++S ++ G+ P E+ ++
Sbjct: 129 RS-GRKVEDPDMLERIRLTIINNLLQYHPESSEKLAMGEFFGIKPPEKKAVVDIATRIVI 187
Query: 124 --------------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
DRPGL E+ ++AD + +V +AEI T A HV+
Sbjct: 188 EDDGPKRSMLYIETADRPGLLLEIIKIIADTNVDVESAEIDTEGLVAKDKFHVS------ 241
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
+ K S++ + L N LR Y R+ +T
Sbjct: 242 -YRGAKLNSSLSQALINCLRYY--LRRPET 268
>gi|323497974|ref|ZP_08102983.1| PII uridylyl-transferase [Vibrio sinaloensis DSM 21326]
gi|323317019|gb|EGA70021.1| PII uridylyl-transferase [Vibrio sinaloensis DSM 21326]
Length = 873
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 18/172 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P ++I T + V S ++H + V+ L+ N + A + +S G+ +D F V
Sbjct: 679 PLILISKKATRGGTEVFVYSKDQHALFASVVAELDRRNFNVHDAQVMTSKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE--EH 116
+D G+ I R K VI ++ LE P ++++ + +PT+ +
Sbjct: 739 LDQHGEVIDESRHKAVIKHLAHVLEDGRPTKIKTRRVPRNLQHFTVKTKIDFLPTKSKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +EF D PGL + V A ADL ++ A+I T +RA + +T + G
Sbjct: 799 TLMEFVALDTPGLLATVGATFADLGIHLHAAKITTIGERAEDLFIITSENGG 850
>gi|406707469|ref|YP_006757821.1| HD domain-containing protein,GlnD
PII-uridylyltransferase,nucleotidyltransferase family
protein [alpha proteobacterium HIMB59]
gi|406653245|gb|AFS48644.1| HD domain-containing protein,GlnD
PII-uridylyltransferase,nucleotidyltransferase family
protein [alpha proteobacterium HIMB59]
Length = 851
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PR+ IDN T ++ S ++ G+L+ ++Q+ +D N+ ++ A IS+ G D+F +
Sbjct: 767 PRITIDNQMSKLVTTFQILSGDRQGLLMDILQIFHDQNMSVQSAKISTYGEKVFDIFQIT 826
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D KKI+D +++ ++ +L
Sbjct: 827 DLKNKKIKDTKILKTLEDQL 846
>gi|296115100|ref|ZP_06833741.1| PII uridylyl-transferase [Gluconacetobacter hansenii ATCC 23769]
gi|295978201|gb|EFG84938.1| PII uridylyl-transferase [Gluconacetobacter hansenii ATCC 23769]
Length = 952
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRVVIDN TV++++ ++ G+L + ++D L I A+I++ G +DVF V
Sbjct: 849 PPRVVIDNRASNACTVVEINGRDRPGLLHDITATISDQKLQIASAHITTYGVRAVDVFYV 908
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G KI DK ++ I+Q L
Sbjct: 909 KDLFGLKITDKARLETIRQTL 929
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +E G DRPGL ++ A ++D + +A I T+ RA V +V D G I D R
Sbjct: 863 TVVEINGRDRPGLLHDITATISDQKLQIASAHITTYGVRAVDVFYVKD-LFGLKITDKAR 921
Query: 177 LSTIKELLFNVLR 189
L TI++ L L+
Sbjct: 922 LETIRQTLLAGLQ 934
>gi|375152168|gb|AFA36542.1| putative amino acid binding protein, partial [Lolium perenne]
Length = 202
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 97/207 (46%), Gaps = 35/207 (16%)
Query: 18 VIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCD 77
+ID ++ DAT++++ ++ G LL ++ L D+ L + K +S+D F+++
Sbjct: 1 LIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVSTDSSVTQTKFHIMRL- 59
Query: 78 GKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMPTEE--------HTSIEFT 122
G+K+ D ++++ I+ + ++S ++ G+ E H +E
Sbjct: 60 GRKVEDPDMLETIRLTIINNLLQYHPESSEKLAMGEFFGIKAPENKIDVEVATHVIVEDD 119
Query: 123 G----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
G DRPGL EV ++ D++C+V +AEI T A HV + +
Sbjct: 120 GPKRSMLYIETADRPGLLLEVIKIITDVNCDVESAEIDTEGLVAKDKFHV-------SYR 172
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKT 199
K S++ ++L N LR Y R+ +T
Sbjct: 173 GAKLNSSLSQVLVNCLRYY--LRRPET 197
>gi|323495364|ref|ZP_08100442.1| PII uridylyl-transferase [Vibrio brasiliensis LMG 20546]
gi|323310435|gb|EGA63621.1| PII uridylyl-transferase [Vibrio brasiliensis LMG 20546]
Length = 873
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 18/172 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P ++I T + V S ++H + V+ L+ N + A + +S G+ +D F V
Sbjct: 679 PLILISKKATRGGTEVFVYSKDQHALFATVVAELDRRNFNVHDAQVMTSKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLETDASFAPSLR------------SSVGVMPTE--EH 116
+D G+ I R K VI ++ LE R + V +PT+ +
Sbjct: 739 LDQHGEVIDESRHKAVIKHLAHVLEDGRQTKIKTRRIPRNLQHFKVKTKVDFLPTKSKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +EF D PGL + V A ADL ++ A+I T +RA + +T + G
Sbjct: 799 TLLEFVALDTPGLLATVGATFADLGVHLHAAKITTIGERAEDLFIITSKNGG 850
>gi|242039737|ref|XP_002467263.1| hypothetical protein SORBIDRAFT_01g022260 [Sorghum bicolor]
gi|241921117|gb|EER94261.1| hypothetical protein SORBIDRAFT_01g022260 [Sorghum bicolor]
Length = 280
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 32/202 (15%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V+ID ++ DAT++++ ++ G LL + L ++ L + KA + D + F++
Sbjct: 75 PKVIIDQDSDPDATIVEITLGDRLGELLDTMNALKNLGLNVVKASVCLDSTGKHNKFSIT 134
Query: 75 DCD-GKKIRDKEVIDYIQ---------------QRLETDASFAPS---------LRSSVG 109
G+KI D E+++ I+ +L A+F P + + +
Sbjct: 135 KASTGRKIDDPELLEAIRLTIINNMLVYHPESSSQLAMGATFGPEAPTEEVDVDIATHID 194
Query: 110 VMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
+ E + + DRPGL ++ +++D++ NV + E T A A HV+
Sbjct: 195 IYDGPERSLLVVETADRPGLLVDLVKIISDININVQSGEFDTEGLLAKAKFHVS------ 248
Query: 170 AIKDPKRLSTIKELLFNVLRGY 191
+ + +K++L N LR +
Sbjct: 249 -YRGKPLMEALKQVLSNSLRYF 269
>gi|392380967|ref|YP_005030163.1| [protein-PII] uridylyltransferase [Azospirillum brasilense Sp245]
gi|356875931|emb|CCC96679.1| [protein-PII] uridylyltransferase [Azospirillum brasilense Sp245]
Length = 935
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV+IDNN TVI+V+ ++ G+L + + L ++ L I A IS+ G +DVF V
Sbjct: 846 PPRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYV 905
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ + + I++RL
Sbjct: 906 KDVFGLKVTHESKLAQIRERL 926
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
HT IE G DRPGL ++ L +L + +A+I T+ ++A V +V D G +
Sbjct: 859 HTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYVKD-VFGLKVTHES 917
Query: 176 RLSTIKELLFNVL 188
+L+ I+E L + L
Sbjct: 918 KLAQIRERLLHAL 930
>gi|293334853|ref|NP_001169848.1| uncharacterized protein LOC100383740 [Zea mays]
gi|224031989|gb|ACN35070.1| unknown [Zea mays]
gi|414882134|tpg|DAA59265.1| TPA: hypothetical protein ZEAMMB73_925280 [Zea mays]
Length = 270
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 98/210 (46%), Gaps = 35/210 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ID ++ DAT++++ ++ G LL ++ L D+ L + K +++D F+++
Sbjct: 66 PVVQIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVTTDSAVTQTKFHIM 125
Query: 75 DCDGKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMPTEE--------HTSI 119
G+K+ D ++++ I+ + ++S ++ G+ P E+ H +
Sbjct: 126 RF-GRKVEDPDMLERIRLTIINNLLQYHPESSEKLAMGEFFGIKPPEKKVDVDIATHIVV 184
Query: 120 EFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
E G DRPGL E+ ++AD + +V +AEI T A HV+
Sbjct: 185 EDDGPKRSILYIETADRPGLLLEIIKIIADTNIDVESAEIDTEGLVAKDKFHVS------ 238
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
+ K S++ + L N LR Y R+ +T
Sbjct: 239 -YRGGKLNSSLSQALTNCLRYY--LRRPET 265
>gi|349686456|ref|ZP_08897598.1| PII uridylyl-transferase [Gluconacetobacter oboediens 174Bp2]
Length = 954
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 56/105 (53%), Gaps = 7/105 (6%)
Query: 10 RRMN----PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
RRM PPRVVIDN TV++++ ++ G+L V L++ L I A+I++ G
Sbjct: 843 RRMRAIHVPPRVVIDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGV 902
Query: 66 WFMDVFNVIDCDGKKIRDKEVIDYIQQRLET---DASFAPSLRSS 107
+DVF V D G KI DK +D I+ L +A A RSS
Sbjct: 903 RAVDVFYVKDLFGLKITDKGRLDRIRTTLLAGLQEAEAAAQRRSS 947
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +E G DRPGL +V A L++ + +A I T+ RA V +V D G I D R
Sbjct: 865 TVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGVRAVDVFYVKD-LFGLKITDKGR 923
Query: 177 LSTIKELLFNVLR 189
L I+ L L+
Sbjct: 924 LDRIRTTLLAGLQ 936
>gi|30173092|sp|Q8RQD1.1|GLND_AZOBR RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|19421768|gb|AAL87737.1|AF149716_1 uridylyltransferase [Azospirillum brasilense]
Length = 933
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV+IDNN TVI+V+ ++ G+L + + L ++ L I A IS+ G +DVF V
Sbjct: 844 PPRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYV 903
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ + + I++RL
Sbjct: 904 KDVFGLKVTHENKLAQIRERL 924
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
HT IE G DRPGL ++ L +L + +A+I T+ ++A V +V D G +
Sbjct: 857 HTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYVKD-VFGLKVTHEN 915
Query: 176 RLSTIKELLFNVL 188
+L+ I+E L + L
Sbjct: 916 KLAQIRERLLHAL 928
>gi|343505423|ref|ZP_08742995.1| PII uridylyl-transferase [Vibrio ichthyoenteri ATCC 700023]
gi|342807721|gb|EGU42901.1| PII uridylyl-transferase [Vibrio ichthyoenteri ATCC 700023]
Length = 874
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 20/183 (10%)
Query: 6 AKLIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SS 62
+ L+R +P P V+I T + V ++ + V+ L+ N + A + +S
Sbjct: 668 SHLLRHDDPTKPLVLISEKATRGGTEVFVYHKDQRALFATVVAELDRRNFNVHDAQVMTS 727
Query: 63 DGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSS 107
G+ +D F V+D G I R K VI ++ L+ P +++
Sbjct: 728 KDGYVLDTFMVLDQHGDAIEVGRHKAVIKHLTHVLQDGRPTKIRTRRTPRNLQHFKVKTK 787
Query: 108 VGVMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 165
V +P++ + T++EF D PGL + V A ADLH N+ A+I T +RA + +T
Sbjct: 788 VDFLPSKSKKRTTLEFVALDTPGLLATVGATFADLHINLHAAKITTIGERAEDLFIITGA 847
Query: 166 STG 168
G
Sbjct: 848 EGG 850
>gi|288958557|ref|YP_003448898.1| [protein-PII] uridylyltransferase [Azospirillum sp. B510]
gi|288910865|dbj|BAI72354.1| [protein-PII] uridylyltransferase [Azospirillum sp. B510]
Length = 947
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV+IDNN TVI+V+ ++ G+L + + L+++ L I A IS+ G +DVF V
Sbjct: 840 PPRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALSNLTLQISSAKISTFGEKAIDVFYV 899
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ + + I++RL
Sbjct: 900 KDVFGLKVTHEGKLAKIKERL 920
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
HT IE G DRPGL ++ L++L + +A+I T ++A V +V D G +
Sbjct: 853 HTVIEVNGRDRPGLLYDLTRALSNLTLQISSAKISTFGEKAIDVFYVKD-VFGLKVTHEG 911
Query: 176 RLSTIKELLFNVL 188
+L+ IKE L + L
Sbjct: 912 KLAKIKERLLSAL 924
>gi|163801777|ref|ZP_02195674.1| PII uridylyl-transferase [Vibrio sp. AND4]
gi|159174285|gb|EDP59089.1| PII uridylyl-transferase [Vibrio sp. AND4]
Length = 874
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 18/172 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V+I T + V S ++ + V+ L+ N + A I +S G+ +D F V
Sbjct: 679 PLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLETD------ASFAPS------LRSSVGVMPTE--EH 116
+D GK I R VI ++ LE+ A P+ +++ V +PT+ +
Sbjct: 739 LDQHGKAIEESRHSAVIKHMTHVLESGRPKKIRARRTPNKLQHFNVKTRVDFLPTKSKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +EF D PGL ++V ADL N+ A+I T +RA + +T + G
Sbjct: 799 TLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAGG 850
>gi|357386406|ref|YP_004901130.1| (protein-PII) uridylyltransferase [Pelagibacterium halotolerans B2]
gi|351595043|gb|AEQ53380.1| (protein-PII) uridylyltransferase [Pelagibacterium halotolerans B2]
Length = 929
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADA-TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAY 59
+D Y + ++ + P + +N +D TVI++ +++ G+L + + L+D+NL I A+
Sbjct: 821 VDSRYNRRLKPFSVPTEIFISNALSDKFTVIEISGLDRTGLLYHLTRALSDLNLTIGSAH 880
Query: 60 ISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLR 105
I + G +DVF V D G KI K I + LE A FAP+ R
Sbjct: 881 IGTYGEKAVDVFYVTDLTGGKITSKVRQKRIHEALE--AVFAPARR 924
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 65/156 (41%), Gaps = 22/156 (14%)
Query: 54 VIKKAYISSDGGWFMDVFNVIDC----DGKKIRDKEVIDYIQQRLETDASFAPSL----- 104
+I ++ G+ +D F + + +KIR + D ++ LE L
Sbjct: 765 IIGAQIFNTKDGYALDTFRLRRAFTSDEDEKIRASRITDMVKALLEGRKYLPADLGVDSR 824
Query: 105 ---RSSVGVMPTE---------EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTH 152
R +PTE + T IE +G DR GL + L+DL+ + +A I T+
Sbjct: 825 YNRRLKPFSVPTEIFISNALSDKFTVIEISGLDRTGLLYHLTRALSDLNLTIGSAHIGTY 884
Query: 153 NDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
++A V +VTD TG I R I E L V
Sbjct: 885 GEKAVDVFYVTD-LTGGKITSKVRQKRIHEALEAVF 919
>gi|407781039|ref|ZP_11128259.1| PII uridylyl-transferase [Oceanibaculum indicum P24]
gi|407208465|gb|EKE78383.1| PII uridylyl-transferase [Oceanibaculum indicum P24]
Length = 973
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 54/95 (56%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV+IDN A TVI+++ ++ G+L + + LN ++L + A IS+ G +DVF V
Sbjct: 863 PPRVLIDNKASATHTVIELNGRDRPGLLSDIARALNQLSLQVSSAKISTYGETAIDVFYV 922
Query: 74 IDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSV 108
D G K+ + I+++L T + S+ +S
Sbjct: 923 KDVFGLKVEHASKLAAIREKLLTALAEPGSVSASA 957
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
HT IE G DRPGL S++ L L V +A+I T+ + A V +V D G ++
Sbjct: 876 HTVIELNGRDRPGLLSDIARALNQLSLQVSSAKISTYGETAIDVFYVKD-VFGLKVEHAS 934
Query: 176 RLSTIKELLFNVL 188
+L+ I+E L L
Sbjct: 935 KLAAIREKLLTAL 947
>gi|417319179|ref|ZP_12105737.1| PII uridylyl-transferase [Vibrio parahaemolyticus 10329]
gi|328474369|gb|EGF45174.1| PII uridylyl-transferase [Vibrio parahaemolyticus 10329]
Length = 874
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 20/183 (10%)
Query: 6 AKLIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SS 62
A L+R +P P V+I T + V + ++ + V+ L+ N + A I +S
Sbjct: 668 AHLLRMDDPNKPLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNFNVHDAQIMTS 727
Query: 63 DGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLET------DASFAPS------LRSS 107
G +D F V+D G+ I R VI ++ LE P+ +++
Sbjct: 728 KDGHVIDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTK 787
Query: 108 VGVMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 165
V +PT+ +HT +EF D PGL ++V ADL+ N+ A+I T +RA + +T
Sbjct: 788 VDFLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSE 847
Query: 166 STG 168
+ G
Sbjct: 848 AGG 850
>gi|414875535|tpg|DAA52666.1| TPA: hypothetical protein ZEAMMB73_008664 [Zea mays]
Length = 270
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 98/210 (46%), Gaps = 35/210 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ID ++ DAT++++ ++ G LL ++ L D+ L + K +++D F+++
Sbjct: 66 PVVQIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVTTDSAVTQTKFHIM 125
Query: 75 DCDGKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMPTEE--------HTSI 119
G+K+ D ++++ I+ + ++S ++ G+ P E+ H +
Sbjct: 126 RF-GRKVEDPDMLERIRLTIINNLLQYHPESSEKLAMGEFFGIKPPEKKVDVDIATHIVV 184
Query: 120 EFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
E G DRPGL E+ ++AD + +V +AEI T A HV+
Sbjct: 185 EDDGPKRSILYIETADRPGLLLEIIKIIADTNIDVESAEIDTEGLVAKDKFHVS------ 238
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
+ K S++ + L N LR Y R+ +T
Sbjct: 239 -YRGGKLNSSLSQALTNCLRYY--LRRPET 265
>gi|349699981|ref|ZP_08901610.1| PII uridylyl-transferase [Gluconacetobacter europaeus LMG 18494]
Length = 969
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Query: 10 RRMN----PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
RRM PPRVVIDN TV++++ ++ G+L V L++ L I A+I++ G
Sbjct: 858 RRMRAIHVPPRVVIDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGV 917
Query: 66 WFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
+DVF V D G KI DK +D I+ L
Sbjct: 918 RAVDVFYVKDLFGLKITDKGRLDRIRTTL 946
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +E G DRPGL +V A L++ + +A I T+ RA V +V D G I D R
Sbjct: 880 TVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGVRAVDVFYVKD-LFGLKITDKGR 938
Query: 177 LSTIKELLFNVLR 189
L I+ L L+
Sbjct: 939 LDRIRTTLLAGLQ 951
>gi|296080993|emb|CBI18591.3| unnamed protein product [Vitis vinifera]
Length = 301
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 101/212 (47%), Gaps = 34/212 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ + AT++++ ++ G L+ ++ L ++L ++K ++++G F +
Sbjct: 96 PMVLIDQDSDSVATIVQLSFGDRLGALVDTMKALKGLDLDVQKGTVTTEGSVTQTKFFIT 155
Query: 75 DCDGKKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEE--------HTSI 119
DG+K+ D ++++ I+ + ++S ++ + G+ E+ H +
Sbjct: 156 RIDGRKVEDPDMLERIRLTIINNLLKYHPESSEQLAMGEAFGIKAPEKKLDVDVATHIHV 215
Query: 120 EFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
+ G DRPGL E+ ++ D++ +V +AEI T A HV+
Sbjct: 216 KDDGPKRSLLYIETADRPGLLLEIVEIITDVNVDVESAEIDTEGLVAKDKFHVSYRGAAL 275
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
+ S++ +++ N LR Y R+ +T +
Sbjct: 276 S-------SSLSQVMINSLRYY--LRRPETEV 298
>gi|28899094|ref|NP_798699.1| PII uridylyl-transferase [Vibrio parahaemolyticus RIMD 2210633]
gi|260361365|ref|ZP_05774430.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus K5030]
gi|260876824|ref|ZP_05889179.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus AN-5034]
gi|260895882|ref|ZP_05904378.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus Peru-466]
gi|260900384|ref|ZP_05908779.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus AQ4037]
gi|32363168|sp|Q87MD6.1|GLND_VIBPA RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|28807318|dbj|BAC60583.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus RIMD
2210633]
gi|308089359|gb|EFO39054.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus Peru-466]
gi|308091507|gb|EFO41202.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus AN-5034]
gi|308108580|gb|EFO46120.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus AQ4037]
gi|308113668|gb|EFO51208.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus K5030]
Length = 874
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 20/183 (10%)
Query: 6 AKLIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SS 62
A L+R +P P V+I T + V + ++ + V+ L+ N + A I +S
Sbjct: 668 AHLLRMDDPNKPLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNFNVHDAQIMTS 727
Query: 63 DGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLET------DASFAPS------LRSS 107
G +D F V+D G+ I R VI ++ LE P+ +++
Sbjct: 728 KDGHVIDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTK 787
Query: 108 VGVMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 165
V +PT+ +HT +EF D PGL ++V ADL+ N+ A+I T +RA + +T
Sbjct: 788 VDFLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSE 847
Query: 166 STG 168
+ G
Sbjct: 848 AGG 850
>gi|384260480|ref|YP_005415666.1| [protein-PII] uridylyltransferase [Rhodospirillum photometricum DSM
122]
gi|378401580|emb|CCG06696.1| [Protein-PII] uridylyltransferase [Rhodospirillum photometricum DSM
122]
Length = 917
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 45/83 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV+IDN TVI+V+ ++ G L V Q L V + I A IS+ G +DVF V
Sbjct: 825 PPRVLIDNQASKTHTVIEVNGRDRPGFLHAVTQALTRVGIQISSARISTYGERVVDVFYV 884
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G K+ K + I++ LE
Sbjct: 885 KDVFGMKVVHKTKLAQIREALEA 907
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 78/191 (40%), Gaps = 26/191 (13%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNVID 75
V+ D++ +I D + G+ ++ + + I A I++ G +D F +
Sbjct: 718 VIPDSHRSVSDVIIYTD--DHPGLFSKIAGAMALAGVTIMDARITTMVDGMALDTFTIQT 775
Query: 76 CDGKKIRDKEVID--------------YIQQRLETDASFAPSLRSSVGVMP--------T 113
DG+ I + E I+ + + L+ A P ++ V P +
Sbjct: 776 LDGRPIAEPERIERLARTVRGVLTGTIALARALQEQAPRLPERAHALTVPPRVLIDNQAS 835
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
+ HT IE G DRPG V L + + +A I T+ +R V +V D G +
Sbjct: 836 KTHTVIEVNGRDRPGFLHAVTQALTRVGIQISSARISTYGERVVDVFYVKD-VFGMKVVH 894
Query: 174 PKRLSTIKELL 184
+L+ I+E L
Sbjct: 895 KTKLAQIREAL 905
>gi|433658394|ref|YP_007275773.1| [Protein-PII] uridylyltransferase [Vibrio parahaemolyticus BB22OP]
gi|432509082|gb|AGB10599.1| [Protein-PII] uridylyltransferase [Vibrio parahaemolyticus BB22OP]
Length = 874
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 20/183 (10%)
Query: 6 AKLIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SS 62
A L+R +P P V+I T + V + ++ + V+ L+ N + A I +S
Sbjct: 668 AHLLRMDDPNKPLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNFNVHDAQIMTS 727
Query: 63 DGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLET------DASFAPS------LRSS 107
G +D F V+D G+ I R VI ++ LE P+ +++
Sbjct: 728 KDGHVIDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTK 787
Query: 108 VGVMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 165
V +PT+ +HT +EF D PGL ++V ADL+ N+ A+I T +RA + +T
Sbjct: 788 VDFLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSE 847
Query: 166 STG 168
+ G
Sbjct: 848 AGG 850
>gi|452964180|gb|EME69226.1| PII uridylyl-transferase [Magnetospirillum sp. SO-1]
Length = 926
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV++DN TV++V+ ++ G+L + + +V L I A+IS+ G +DVF V
Sbjct: 827 PPRVLVDNKPSRSHTVVEVNGRDRPGLLYDITNAMTNVGLQISSAHISTYGERVVDVFYV 886
Query: 74 IDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTE 114
D G KI ++ I+ L A P+ R++ G E
Sbjct: 887 KDVFGHKIEHGRKLEQIKAAL-LAALEDPAARTAAGTKAAE 926
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 87/212 (41%), Gaps = 30/212 (14%)
Query: 5 YAKLIRRMNPPRVVIDNNTCADA----TVIKVDSVNKHGILLQVIQVL--NDVNLVIKKA 58
+A+L+R R + D+ T I V + + G+ Q+ + + N+V K
Sbjct: 702 HARLVREAEAVRAPLTVEPRVDSHRAVTEIVVYTGDHPGLFSQIAGAMAVSGANIVDAK- 760
Query: 59 YISSDGGWFMDVFNVIDCDGKKI----RDKEVIDYIQQRLETDASFAPSLRSSVGVMPTE 114
I+ G +D F + D DG + ++ ++Q L A L + G +P+
Sbjct: 761 IITLANGMALDTFCIQDSDGGAFDSPAKLAKLSACVEQVLSGRARLDRELAARKGKLPSR 820
Query: 115 ------------------EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
HT +E G DRPGL ++ + ++ + +A I T+ +R
Sbjct: 821 AHVFKVPPRVLVDNKPSRSHTVVEVNGRDRPGLLYDITNAMTNVGLQISSAHISTYGERV 880
Query: 157 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
V +V D G+ I+ ++L IK L L
Sbjct: 881 VDVFYVKD-VFGHKIEHGRKLEQIKAALLAAL 911
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 101 APSLRSSVGVMP-TEEHTSIE----FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
A ++R+ + V P + H ++ +TG D PGLFS++ +A N+V+A+I T +
Sbjct: 709 AEAVRAPLTVEPRVDSHRAVTEIVVYTG-DHPGLFSQIAGAMAVSGANIVDAKIITLANG 767
Query: 156 AAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRG 190
A S G A P +L+ + + VL G
Sbjct: 768 MALDTFCIQDSDGGAFDSPAKLAKLSACVEQVLSG 802
>gi|153871765|ref|ZP_02000853.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Beggiatoa sp. PS]
gi|152071768|gb|EDN69146.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Beggiatoa sp. PS]
Length = 891
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 85/195 (43%), Gaps = 24/195 (12%)
Query: 17 VVIDNNTCADAT-VIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVI 74
VV++ T T +I +D+ + NL + AYI SD + + + VI
Sbjct: 694 VVLERQTTRGGTGIIVIDTRGCDYLFADTTYFFEQHNLTVVDAYIIPSDSKYTISGYTVI 753
Query: 75 DCDGKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVG----------VMPTEEH- 116
+ DG +I KE ++ I Q L ET+A F P R G V T++H
Sbjct: 754 EDDGTEITPKEQVEKILQSLTQALSRDETNAPFYPINRRIPGHLKHFPELTRVTFTQDHI 813
Query: 117 ---TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
T+++ TDRPG+ S + V A+I T R V VTD+ +A+
Sbjct: 814 NNHTTVQVITTDRPGVLSRIAQAFLTCQIRVKKAKIATFGTRVEDVFFVTDYE-NHALYS 872
Query: 174 PKRLSTIKELLFNVL 188
K+L +++ L +L
Sbjct: 873 SKQLDCLRDKLSELL 887
>gi|374292182|ref|YP_005039217.1| [protein-PII] uridylyltransferase [Azospirillum lipoferum 4B]
gi|357424121|emb|CBS86988.1| [Protein-PII] uridylyltransferase [Azospirillum lipoferum 4B]
Length = 954
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 49/81 (60%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV+IDNN TVI+V+ ++ G+L + + L+++ L I A +S+ G +DVF V
Sbjct: 841 PPRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALSNLTLQISSAKVSTFGEKAIDVFYV 900
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ + + I++RL
Sbjct: 901 KDVFGLKVTHEGKLAKIKERL 921
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
HT IE G DRPGL ++ L++L + +A++ T ++A V +V D G +
Sbjct: 854 HTVIEVNGRDRPGLLYDLTRALSNLTLQISSAKVSTFGEKAIDVFYVKD-VFGLKVTHEG 912
Query: 176 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRER 211
+L+ IKE L + L DD PP + R R
Sbjct: 913 KLAKIKERLLSAL---DD---PSGDAPPPATVKRTR 942
>gi|224110178|ref|XP_002315438.1| predicted protein [Populus trichocarpa]
gi|222864478|gb|EEF01609.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 100/213 (46%), Gaps = 35/213 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ +DAT++++ ++ G L+ + L + L + K + +DG F +
Sbjct: 11 PVVLIDQDSDSDATIVQLSFGDRLGALIDTMNALKHLGLDVAKGTVLTDGPVKQTKFFIT 70
Query: 75 DCD-GKKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEEHTSIEFT---- 122
D G+K+ D ++++ I+ + ++S ++ + G+ E+ ++ T
Sbjct: 71 RLDTGRKVEDPDMLERIRLTIINNLLKYHPESSERLAMGEAFGIKAPEKKLDVDITTHVH 130
Query: 123 --------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
DRPGL E+ ++AD++ +V +AEI T A HV+ G
Sbjct: 131 VKEDGPKRSLLCIETADRPGLLVEIIKIIADVNIDVESAEIDTEGLVAKDKFHVS--YRG 188
Query: 169 YAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
A+ S++ ++L N LR Y R+ +T +
Sbjct: 189 AALT-----SSLSQVLVNCLRYY--LRRPETDI 214
>gi|262404596|ref|ZP_06081151.1| [Protein-PII] uridylyltransferase [Vibrio sp. RC586]
gi|262349628|gb|EEY98766.1| [Protein-PII] uridylyltransferase [Vibrio sp. RC586]
Length = 876
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 90/191 (47%), Gaps = 19/191 (9%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V+I T + V + ++ + V+ L+ NL + A I +S G+ +D F V
Sbjct: 679 PLVLISKKATRGGTEVFVYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLETDASFAPSLR------------SSVGVMPTE--EH 116
+D +G+ I R + +I ++ Q LE +R + V +PT+ +
Sbjct: 739 LDQNGQAIEENRHQALIHHLVQVLEEGRPTTQKVRRIPRNLHHFKVKTQVDFLPTKSKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+ S G + D +
Sbjct: 799 TLMEFVALDTPGLLASVGATFAELNFDLHAAKITTIGERAEDLFILTN-SQGARLNDEEE 857
Query: 177 LSTIKELLFNV 187
+ L+ NV
Sbjct: 858 QLLRERLIENV 868
>gi|356536361|ref|XP_003536707.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Glycine max]
Length = 283
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 33/203 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID + ++AT++++ ++ G LL ++ L D+ L + K +S++G F +
Sbjct: 77 PIVLIDQESDSEATIVQLSFGDRLGALLDTMKALKDLGLDVSKGTVSTEGLVKQTKFFIT 136
Query: 75 DCD-GKKIRDKEVIDYIQ---------------QRLETDASF---APS------LRSSVG 109
D G+K+ D ++++ I+ + L F AP +++ +
Sbjct: 137 QSDTGRKVEDPDMLERIRLTIINNLLKYHPESSELLAMGEVFGIKAPKKKLDDDIKTRIQ 196
Query: 110 VMPTEEHTSIEFTGT-DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
V S+ + T DRPGL E+ V+AD++ +V +AEI T A HV+ G
Sbjct: 197 VKEDGPKRSLLYIETADRPGLLVEIIKVIADVNIDVESAEIDTEGLVAKDTFHVS--YGG 254
Query: 169 YAIKDPKRLSTIKELLFNVLRGY 191
A+ S++ ++L N LR Y
Sbjct: 255 AALN-----SSMAQVLVNCLRYY 272
>gi|254282307|ref|ZP_04957275.1| protein-pII uridylyltransferase [gamma proteobacterium NOR51-B]
gi|219678510|gb|EED34859.1| protein-pII uridylyltransferase [gamma proteobacterium NOR51-B]
Length = 440
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 89/191 (46%), Gaps = 24/191 (12%)
Query: 21 NNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA--YISSDGGWFMDVFNVIDCDG 78
++ A+ T I V + +K +L+++ L ++L I A Y +DG ++ F V++ DG
Sbjct: 248 DSPVANTTQIFVHAQDKPELLVRICIELELLHLSIHDARIYTGTDGA-TLNTFYVLNSDG 306
Query: 79 KKIRDKEV-IDYIQQRLETDASFAPSLRSSVG---------VMPTEEH---------TSI 119
I E +DYI+ +ET + S RSS VMPTE H T +
Sbjct: 307 SPIASDEANLDYIRSSIETGLASNKS-RSSTRRTPRQLKSFVMPTETHIRQDLDRGWTIL 365
Query: 120 EFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLST 179
E DRPGL + + A+ D + +A+I T +R V VTD G A+ + L
Sbjct: 366 EVATPDRPGLLARLGALFIDHGVALQSAKIQTLGERVEDVFFVTDMQ-GRALTNNTTLEH 424
Query: 180 IKELLFNVLRG 190
++ + L G
Sbjct: 425 LQTAIRETLDG 435
>gi|440225345|ref|YP_007332436.1| protein-P-II uridylyltransferase [Rhizobium tropici CIAT 899]
gi|440036856|gb|AGB69890.1| protein-P-II uridylyltransferase [Rhizobium tropici CIAT 899]
Length = 971
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 51/83 (61%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V+I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G+KI ++ YI RL+
Sbjct: 908 ADLVGQKISNENRRAYITARLKA 930
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE DRPGL SE+ AVL+DL ++ +A I T ++ +V D G I + R
Sbjct: 862 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVAD-LVGQKISNENR 920
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
+ I L V+ G +D + + P GI+
Sbjct: 921 RAYITARLKAVMAGEEDEMRERM---PSGII 948
>gi|1184993|gb|AAC32290.1| putative uridylyltransferase/uridylyl-removing enzyme [Rhizobium
tropici CIAT 899]
Length = 971
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 51/83 (61%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V+I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G+KI ++ YI RL+
Sbjct: 908 ADLVGQKISNENRRAYITARLKA 930
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE DRPGL SE+ AVL+DL ++ +A I T ++ +V D G I + R
Sbjct: 862 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVAD-LVGQKISNENR 920
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
+ I L V+ G +D + + P GI+
Sbjct: 921 RAYITARLKAVMAGEEDEMRERM---PSGII 948
>gi|7387711|sp|Q53245.2|GLND_RHITR RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
Length = 948
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 51/83 (61%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V+I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 825 PPSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 884
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G+KI ++ YI RL+
Sbjct: 885 ADLVGQKISNENRRAYITARLKA 907
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE DRPGL SE+ AVL+DL ++ +A I T ++ +V D G I + R
Sbjct: 839 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVAD-LVGQKISNENR 897
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
+ I L V+ G +D + + P GI+
Sbjct: 898 RAYITARLKAVMAGEEDEMRERM---PSGII 925
>gi|319779935|ref|YP_004139411.1| protein-P-II uridylyltransferase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317165823|gb|ADV09361.1| protein-P-II uridylyltransferase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 933
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
IE G DRPGL SE+ L+DL ++ +A I T ++ +VTD TG I +P R++
Sbjct: 849 IEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVTD-LTGQKIDNPARIA 907
Query: 179 TIKELLFNVLRGYDDFRKAKT 199
TI+ L L G R K+
Sbjct: 908 TIRNRLMATLEGIVPERGGKS 928
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPR I N +VI+V+ +++ G+L ++ L+D++L I A+I++ G +D F V
Sbjct: 833 PPRAEIRNTLSNRFSVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYV 892
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G+KI + I I+ RL
Sbjct: 893 TDLTGQKIDNPARIATIRNRL 913
>gi|326499446|dbj|BAJ86034.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 312
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 97/210 (46%), Gaps = 35/210 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ DAT++++ ++ G LL ++ L D+ L + K +++D F+++
Sbjct: 108 PVVLIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVATDSSVTQTKFHIM 167
Query: 75 DCDGKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMPTEEHTSIEFT----- 122
G+K+ D ++++ I+ + ++S ++ G+ E+ +E
Sbjct: 168 RL-GRKVEDPDMLETIRLTIINNLLQYHPESSEKLAMGEFFGIKAPEKKVDVEVATHVIV 226
Query: 123 -------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
DRPGL EV ++ D++ +V +AEI T A HV+
Sbjct: 227 QDDGPKRSMLYIETADRPGLLLEVIKIITDVNIDVESAEIDTEGLVAKDKFHVS------ 280
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
+ K S++ ++L N LR Y R+ +T
Sbjct: 281 -YRGAKLNSSLSQVLVNCLRYY--LRRPET 307
>gi|375266429|ref|YP_005023872.1| PII uridylyl-transferase [Vibrio sp. EJY3]
gi|369841749|gb|AEX22893.1| PII uridylyl-transferase [Vibrio sp. EJY3]
Length = 874
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 84/183 (45%), Gaps = 20/183 (10%)
Query: 6 AKLIRR--MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SS 62
A L+R + P V+I T + V S ++ + V+ L+ N + A I +S
Sbjct: 668 AHLLRMDDLTKPLVLISKKATRGGTEVFVYSKDQPALFATVVAELDRRNFNVHDAQIMTS 727
Query: 63 DGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSS 107
G +D F V+D G+ I R VI ++ LE P ++++
Sbjct: 728 KDGHVIDTFIVLDQHGEAIDESRHAAVIKHLTHVLEDGRPTKIKTRRTPHKLQHFNVKTK 787
Query: 108 VGVMPT--EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 165
V +PT ++HT +EF D PGL ++V ADL+ N+ A+I T +RA + +T
Sbjct: 788 VDFLPTRGKKHTLMEFVALDTPGLLAKVGRTFADLNINIHGAKITTIGERAEDLFILTSG 847
Query: 166 STG 168
+ G
Sbjct: 848 TGG 850
>gi|374578662|ref|ZP_09651758.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. WSM471]
gi|374426983|gb|EHR06516.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. WSM471]
Length = 929
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL E+ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 845 SDRYTVIEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIS 903
Query: 173 DPKRLSTIKELLFNVLRG 190
P R S IK L +V+ G
Sbjct: 904 APTRQSAIKSALTHVMAG 921
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI++ +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 836 PEVTINNQWSDRYTVIEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 75 DCDGKKI 81
D G +I
Sbjct: 896 DLLGAQI 902
>gi|357030239|ref|ZP_09092200.1| PII uridylyl-transferase [Mesorhizobium amorphae CCNWGS0123]
gi|355532907|gb|EHH02254.1| PII uridylyl-transferase [Mesorhizobium amorphae CCNWGS0123]
Length = 933
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
IE G DRPGL SE+ L+DL ++ +A I T ++ +VTD TG I P R++
Sbjct: 849 IEIEGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYVTD-LTGQKIDSPTRMA 907
Query: 179 TIKELLFNVLRGYDDFRKAKT 199
TI + L L G R K
Sbjct: 908 TIHKRLIETLEGTAPERNGKA 928
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPR I N +VI+++ +++ G+L ++ L+D++L I A+I++ G +D F V
Sbjct: 833 PPRAEIRNTLSNRFSVIEIEGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYV 892
Query: 74 IDCDGKKIRDKEVIDYIQQRL-ETDASFAP 102
D G+KI + I +RL ET AP
Sbjct: 893 TDLTGQKIDSPTRMATIHKRLIETLEGTAP 922
>gi|359486976|ref|XP_002268975.2| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Vitis vinifera]
Length = 280
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 100/210 (47%), Gaps = 34/210 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ + AT++++ ++ G L+ ++ L ++L ++K ++++G F +
Sbjct: 75 PMVLIDQDSDSVATIVQLSFGDRLGALVDTMKALKGLDLDVQKGTVTTEGSVTQTKFFIT 134
Query: 75 DCDGKKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEE--------HTSI 119
DG+K+ D ++++ I+ + ++S ++ + G+ E+ H +
Sbjct: 135 RIDGRKVEDPDMLERIRLTIINNLLKYHPESSEQLAMGEAFGIKAPEKKLDVDVATHIHV 194
Query: 120 EFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
+ G DRPGL E+ ++ D++ +V +AEI T A HV+
Sbjct: 195 KDDGPKRSLLYIETADRPGLLLEIVEIITDVNVDVESAEIDTEGLVAKDKFHVSYRGAAL 254
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
+ S++ +++ N LR Y R+ +T
Sbjct: 255 S-------SSLSQVMINSLRYY--LRRPET 275
>gi|347734806|ref|ZP_08867795.1| PII uridylyltransferase [Azospirillum amazonense Y2]
gi|346922124|gb|EGY02613.1| PII uridylyltransferase [Azospirillum amazonense Y2]
Length = 950
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV++DN A TVI+V+ ++ G+L + + L +NL I A IS+ G +DVF V
Sbjct: 841 PPRVLVDNKASAGYTVIEVNGRDRPGLLYDLTRALTALNLQIASAKISTYGNAAVDVFYV 900
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ + + I++ L
Sbjct: 901 KDIFGLKVAHEAKLTQIRKEL 921
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 62/151 (41%), Gaps = 31/151 (20%)
Query: 65 GWFMDVFNV---------IDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE 115
G +DVF++ D K+ R K +++ L D AP L +P+
Sbjct: 779 GMALDVFSLQGAGPSGARFDSGEKRSRLK---SSVEKALAGDIKLAPELAKRASPLPSRT 835
Query: 116 ------------------HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAA 157
+T IE G DRPGL ++ L L+ + +A+I T+ + A
Sbjct: 836 RVFRVPPRVLVDNKASAGYTVIEVNGRDRPGLLYDLTRALTALNLQIASAKISTYGNAAV 895
Query: 158 AVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
V +V D G + +L+ I++ L VL
Sbjct: 896 DVFYVKD-IFGLKVAHEAKLTQIRKELLAVL 925
>gi|119477100|ref|ZP_01617336.1| PII uridylyl-transferase [marine gamma proteobacterium HTCC2143]
gi|119449463|gb|EAW30701.1| PII uridylyl-transferase [marine gamma proteobacterium HTCC2143]
Length = 896
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 79/176 (44%), Gaps = 22/176 (12%)
Query: 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG-GWFMDVFNVIDCDGKKI-RDK 84
AT I + + K + L +NL I+ A I S G G+ +D F V+D +G+ I D
Sbjct: 709 ATQIFIHTQQKDSLFAIAASALEQLNLSIQDARIYSSGSGFTLDTFFVLDSNGEPIGNDP 768
Query: 85 EVIDYIQQRL-----ETDAS--------------FAPSLRSSVGVMPTEEHTSIEFTGTD 125
E ID IQ L TD+S F+ R+++ H+ +E D
Sbjct: 769 ERIDEIQSVLMEHLINTDSSLDIMQCRTPRQMRLFSVPTRTTLFTDVAGGHSVLEVLTPD 828
Query: 126 RPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
RPGL + + + D ++NA+I T + V +TD++ I DP +I+
Sbjct: 829 RPGLLARIGKIFLDYDIKLLNAKIATLGESVDDVFFITDNNHQ-PINDPALCESIQ 883
>gi|158421962|ref|YP_001523254.1| PII uridylyl-transferase [Azorhizobium caulinodans ORS 571]
gi|158328851|dbj|BAF86336.1| protein-P-II uridylyltransferase [Azorhizobium caulinodans ORS 571]
Length = 984
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 95 ETDASFAPSLRSSVGVMP--------TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVN 146
E A P R + V P + HT +E +G DRPGL E+ L+ L+ N+ +
Sbjct: 868 EVMAKKLPKARRTFSVEPEVTVNNTWSNRHTVVEVSGIDRPGLLFELTNTLSRLNLNIAS 927
Query: 147 AEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDD 193
A + T +RA V +VTD G I R STI+ L V G D
Sbjct: 928 AHVATFGERAVDVFYVTD-LMGAKITGAARQSTIRRALIGVFEGSFD 973
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ++N TV++V +++ G+L ++ L+ +NL I A++++ G +DVF V
Sbjct: 885 PEVTVNNTWSNRHTVVEVSGIDRPGLLFELTNTLSRLNLNIASAHVATFGERAVDVFYVT 944
Query: 75 DCDGKKI 81
D G KI
Sbjct: 945 DLMGAKI 951
>gi|91223471|ref|ZP_01258736.1| PII uridylyl-transferase [Vibrio alginolyticus 12G01]
gi|91191557|gb|EAS77821.1| PII uridylyl-transferase [Vibrio alginolyticus 12G01]
Length = 874
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 20/181 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L+R +P P V+I T + V + ++ + V+ L+ N + A I +S
Sbjct: 670 LLRMEDPTKPLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNFNVHDAQIMTSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLET------DASFAPS------LRSSVG 109
G +D F V+D G+ I R VI ++ LE P+ +++ V
Sbjct: 730 GHVIDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTKVD 789
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ +HT +EF D PGL ++V ADL+ N+ A+I T +RA + +T +
Sbjct: 790 FLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSDAG 849
Query: 168 G 168
G
Sbjct: 850 G 850
>gi|451970864|ref|ZP_21924088.1| [Protein-PII] uridylyltransferase [Vibrio alginolyticus E0666]
gi|451933281|gb|EMD80951.1| [Protein-PII] uridylyltransferase [Vibrio alginolyticus E0666]
Length = 874
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 20/181 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L+R +P P V+I T + V + ++ + V+ L+ N + A I +S
Sbjct: 670 LLRMEDPTKPLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNFNVHDAQIMTSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLET------DASFAPS------LRSSVG 109
G +D F V+D G+ I R VI ++ LE P+ +++ V
Sbjct: 730 GHVIDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTKVD 789
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ +HT +EF D PGL ++V ADL+ N+ A+I T +RA + +T +
Sbjct: 790 FLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSDAG 849
Query: 168 G 168
G
Sbjct: 850 G 850
>gi|262393517|ref|YP_003285371.1| [protein-PII] uridylyltransferase [Vibrio sp. Ex25]
gi|262337111|gb|ACY50906.1| [Protein-PII] uridylyltransferase [Vibrio sp. Ex25]
Length = 874
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 20/181 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L+R +P P V+I T + V + ++ + V+ L+ N + A I +S
Sbjct: 670 LLRMEDPTKPLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNFNVHDAQIMTSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLET------DASFAPS------LRSSVG 109
G +D F V+D G+ I R VI ++ LE P+ +++ V
Sbjct: 730 GHVIDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTKVD 789
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ +HT +EF D PGL ++V ADL+ N+ A+I T +RA + +T +
Sbjct: 790 FLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSDAG 849
Query: 168 G 168
G
Sbjct: 850 G 850
>gi|304393801|ref|ZP_07375726.1| protein-P-II uridylyltransferase [Ahrensia sp. R2A130]
gi|303294000|gb|EFL88375.1| protein-P-II uridylyltransferase [Ahrensia sp. R2A130]
Length = 967
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 60/110 (54%), Gaps = 8/110 (7%)
Query: 1 MDDEYAKLIRRMNP----PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK 56
++ + K RR P+V IDN TVI+++++++ G+L ++ L D++L I
Sbjct: 842 LESQAGKPARRQQAFTITPKVTIDNAASNKFTVIELEALDRSGVLSRITDTLADLSLDIA 901
Query: 57 KAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ----QRLETDASFAP 102
A+I++ G F+D F V D G KI ++E +D + + LE +A P
Sbjct: 902 SAHIATYGEKFVDTFYVTDLVGSKILNEERLDIARATLLEVLENNAHAKP 951
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 18/131 (13%)
Query: 75 DCDGKKIRDKEVIDYIQQ---------RLETDASFAPSLRSSVGVMP--------TEEHT 117
D D +K R + + D I++ LE+ A + + + P + + T
Sbjct: 814 DPDDEKRRARNIADTIEKVLRGEKRLSELESQAGKPARRQQAFTITPKVTIDNAASNKFT 873
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
IE DR G+ S + LADL ++ +A I T+ ++ +VTD G I + +RL
Sbjct: 874 VIELEALDRSGVLSRITDTLADLSLDIASAHIATYGEKFVDTFYVTD-LVGSKILNEERL 932
Query: 178 STIKELLFNVL 188
+ L VL
Sbjct: 933 DIARATLLEVL 943
>gi|444377211|ref|ZP_21176444.1| [Protein-PII] uridylyltransferase [Enterovibrio sp. AK16]
gi|443678676|gb|ELT85343.1| [Protein-PII] uridylyltransferase [Enterovibrio sp. AK16]
Length = 873
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 20/192 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ N T I V S ++ + +V+ L+ NL + A I +S G+ +D F V
Sbjct: 680 PLVLVSKNATRGGTEIFVYSQDRPSLFARVVAALDKKNLSVHDAQIMTSKDGFALDTFMV 739
Query: 74 IDCDGKKI---RDKEVIDYIQQRLETDAS------------FAPSLRSSVGVMPTE--EH 116
+D + I R +++ + + L D A ++++ V +PT
Sbjct: 740 LDSHNEAIQPDRHEKIREGVTLALTQDGPITIPVKRASRKLMAFNVKTQVSFLPTRTGRR 799
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +E D PGL + V AV A ++ A+I T +RA VTD A+ D +
Sbjct: 800 TLLELVALDTPGLLARVGAVFAREGVSLQAAKITTIGERAEDFFIVTD-GERQALSDEVQ 858
Query: 177 LSTIKELLFNVL 188
T+KE LF+ L
Sbjct: 859 -KTLKEALFDAL 869
>gi|21592963|gb|AAM64912.1| unknown [Arabidopsis thaliana]
Length = 301
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 101/213 (47%), Gaps = 35/213 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID + +AT++++ N+ G L+ ++ L D+ L + K +S++G F++
Sbjct: 95 PMVMIDQDADPEATIVQLSFGNRLGALIDTMRALKDLGLDVIKGTVSTEGSIKQTKFSIT 154
Query: 75 DCD-GKKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEE--------HTS 118
D G+K+ D ++++ I+ + + S ++ + G+ E+ H
Sbjct: 155 KRDTGRKVEDPDLLEQIRLTIINNLLKYHPECSEQLAMGETFGIKAPEKKIDVDIATHIH 214
Query: 119 IEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
++ G DRPGL E+ V+AD++ +V +AEI T A HV+ G
Sbjct: 215 VKEDGPKRSLLVIETADRPGLVVEMIKVMADVNIDVESAEIDTEGLVAKDKFHVSYQ--G 272
Query: 169 YAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
A+ ++ ++L N LR + R+ +T +
Sbjct: 273 QALN-----RSLSQVLVNCLRYF--LRRPETDI 298
>gi|269966249|ref|ZP_06180338.1| [Protein-PII] uridylyltransferase [Vibrio alginolyticus 40B]
gi|269829164|gb|EEZ83409.1| [Protein-PII] uridylyltransferase [Vibrio alginolyticus 40B]
Length = 877
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 20/181 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L+R +P P V+I T + V + ++ + V+ L+ N + A I +S
Sbjct: 673 LLRMEDPTKPLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNFNVHDAQIMTSKD 732
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLET------DASFAPS------LRSSVG 109
G +D F V+D G+ I R VI ++ LE P+ +++ V
Sbjct: 733 GHVIDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTKVD 792
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ +HT +EF D PGL ++V ADL+ N+ A+I T +RA + +T +
Sbjct: 793 FLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSDAG 852
Query: 168 G 168
G
Sbjct: 853 G 853
>gi|343500492|ref|ZP_08738384.1| PII uridylyl-transferase [Vibrio tubiashii ATCC 19109]
gi|418477317|ref|ZP_13046450.1| PII uridylyl-transferase [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
gi|342820208|gb|EGU55034.1| PII uridylyl-transferase [Vibrio tubiashii ATCC 19109]
gi|384575057|gb|EIF05511.1| PII uridylyl-transferase [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
Length = 873
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 18/172 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P ++I T + V S ++H + V+ L+ N + A + +S G+ +D F V
Sbjct: 679 PLILISKKATRGGTEVFVYSKDQHALFATVVAELDRRNFNVHDAQVMTSKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE--EH 116
+D +G + R K VI ++ LE P +++ V +PT+ +
Sbjct: 739 LDQNGDVVDESRHKAVIKHLAHVLEDGRPTKIKTRRVPRNLQHFKVKTQVDFLPTKSKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +EF D PGL + V A AD ++ A+I T +RA + +T S G
Sbjct: 799 TLLEFVALDTPGLLATVGATFADSGVHLHAAKITTIGERAEDLFIITSESGG 850
>gi|433771601|ref|YP_007302068.1| (protein-PII) uridylyltransferase [Mesorhizobium australicum
WSM2073]
gi|433663616|gb|AGB42692.1| (protein-PII) uridylyltransferase [Mesorhizobium australicum
WSM2073]
Length = 933
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
IE G DRPGL SE+ L+DL ++ +A I T ++ +VTD TG I +P R++
Sbjct: 849 IEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVTD-LTGQKIDNPARIA 907
Query: 179 TIKELLFNVLRG 190
TI+ L L G
Sbjct: 908 TIRNRLIATLEG 919
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPR I N +VI+V+ +++ G+L ++ L+D++L I A+I++ G +D F V
Sbjct: 833 PPRAEIRNALSNRFSVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYV 892
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G+KI + I I+ RL
Sbjct: 893 TDLTGQKIDNPARIATIRNRL 913
>gi|15238305|ref|NP_196094.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|7413536|emb|CAB86016.1| putative protein [Arabidopsis thaliana]
gi|9758449|dbj|BAB08978.1| unnamed protein product [Arabidopsis thaliana]
gi|18252933|gb|AAL62393.1| putative protein [Arabidopsis thaliana]
gi|21389645|gb|AAM48021.1| putative protein [Arabidopsis thaliana]
gi|332003394|gb|AED90777.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|347949480|gb|AEP31953.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 301
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 101/213 (47%), Gaps = 35/213 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID + +AT++++ N+ G L+ ++ L D+ L + K +S++G F++
Sbjct: 95 PMVMIDQDADPEATIVQLSFGNRLGALIDTMRALKDLGLDVIKGTVSTEGSIKQTKFSIT 154
Query: 75 DCD-GKKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEE--------HTS 118
D G+K+ D ++++ I+ + + S ++ + G+ E+ H
Sbjct: 155 KRDTGRKVEDPDLLEQIRLTIINNLLKYHPECSEQLAMGETFGIKAPEKKIDVDIATHIH 214
Query: 119 IEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
++ G DRPGL E+ V+AD++ +V +AEI T A HV+ G
Sbjct: 215 VKEDGPKRSLLVIETADRPGLVVEMIKVMADVNIDVESAEIDTEGLVAKDKFHVSYQ--G 272
Query: 169 YAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
A+ ++ ++L N LR + R+ +T +
Sbjct: 273 QALN-----RSLSQVLVNCLRYF--LRRPETDI 298
>gi|383775112|ref|YP_005454181.1| [protein-PII] uridylyltransferase [Bradyrhizobium sp. S23321]
gi|381363239|dbj|BAL80069.1| [Protein-PII] uridylyltransferase [Bradyrhizobium sp. S23321]
Length = 930
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL E+ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 845 SDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIN 903
Query: 173 DPKRLSTIKELLFNVLRG 190
P R S IK L +V+ G
Sbjct: 904 APTRQSAIKSALTHVMAG 921
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 836 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 75 DCDGKKI 81
D G +I
Sbjct: 896 DLLGAQI 902
>gi|398826993|ref|ZP_10585213.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. YR681]
gi|398219320|gb|EJN05805.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. YR681]
Length = 929
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL E+ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 845 SDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIN 903
Query: 173 DPKRLSTIKELLFNVLRG 190
P R S IK L +V+ G
Sbjct: 904 APTRQSAIKSALTHVMAG 921
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 836 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 75 DCDGKKI 81
D G +I
Sbjct: 896 DLLGAQI 902
>gi|62288144|sp|Q89VX9.2|GLND_BRAJA RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
Length = 929
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL E+ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 845 SDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIN 903
Query: 173 DPKRLSTIKELLFNVLRG 190
P R S IK L +V+ G
Sbjct: 904 APTRQSAIKSALTHVMAG 921
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 836 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 75 DCDGKKI 81
D G +I
Sbjct: 896 DLLGAQI 902
>gi|424047451|ref|ZP_17785010.1| protein-P-II uridylyltransferase [Vibrio cholerae HENC-03]
gi|408883944|gb|EKM22707.1| protein-P-II uridylyltransferase [Vibrio cholerae HENC-03]
Length = 874
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 20/181 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L+R +P P V+I T + V S ++ + V+ L+ N + A I +S
Sbjct: 670 LLRMEDPSKPLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAPS------LRSSVG 109
G+ +D F V+D GK I R V +I LE P+ +++ V
Sbjct: 730 GYVLDTFMVLDQHGKAIEEGRHSAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKVD 789
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ + T +EF D PGL ++V ADL N+ A+I T +RA + +T +
Sbjct: 790 FLPTKSKKRTLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAG 849
Query: 168 G 168
G
Sbjct: 850 G 850
>gi|388495334|gb|AFK35733.1| unknown [Lotus japonicus]
Length = 282
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 96/203 (47%), Gaps = 33/203 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ ++AT++++ ++ G L+ ++ L D+ L + K +S++G F +
Sbjct: 76 PMVLIDQDSDSEATIVQLSFGDRLGALIDTMKALKDLGLDVSKGTVSTEGSVKQTKFFIT 135
Query: 75 DCD-GKKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEEHTSIEFT---- 122
+ G+K+ D ++++ I+ + ++S ++ G+ + ++F
Sbjct: 136 QSNTGRKVEDPDMLERIRLTIISNLLKYHPESSEQLAMGEVFGIKAPVKKLDLDFATRIQ 195
Query: 123 --------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
DRPGL E+ V+AD++ +V +AEI T A HV+ G
Sbjct: 196 VKEDGPKRSLLYIETADRPGLLVEIIKVIADVNIDVESAEIDTEGLIAKDKFHVS--YGG 253
Query: 169 YAIKDPKRLSTIKELLFNVLRGY 191
A+ S++ ++L N LR Y
Sbjct: 254 AALN-----SSMSQVLVNCLRYY 271
>gi|384214647|ref|YP_005605811.1| bifunctional uridylyltransferase/uridylyl-removing enzyme
[Bradyrhizobium japonicum USDA 6]
gi|354953544|dbj|BAL06223.1| bifunctional uridylyltransferase/uridylyl-removing enzyme
[Bradyrhizobium japonicum USDA 6]
Length = 929
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL E+ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 845 SDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIN 903
Query: 173 DPKRLSTIKELLFNVLRG 190
P R S IK L +V+ G
Sbjct: 904 APTRQSAIKSALTHVMAG 921
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 836 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 75 DCDGKKI 81
D G +I
Sbjct: 896 DLLGAQI 902
>gi|13474440|ref|NP_106008.1| PII uridylyl-transferase [Mesorhizobium loti MAFF303099]
gi|22256765|sp|Q98C27.1|GLND_RHILO RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|14025193|dbj|BAB51794.1| uridylyltransferase [Mesorhizobium loti MAFF303099]
Length = 933
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
IE G DRPGL SE+ L+DL ++ +A I T ++ +VTD TG I P R++
Sbjct: 849 IEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVTD-LTGQKIDSPARIA 907
Query: 179 TIKELLFNVLRGYDDFRKAKT 199
TI+ L L G R K
Sbjct: 908 TIRNRLMATLEGIAPERGGKA 928
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPR I N +VI+V+ +++ G+L ++ L+D++L I A+I++ G +D F V
Sbjct: 833 PPRAEIRNTLSNRFSVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYV 892
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G+KI I I+ RL
Sbjct: 893 TDLTGQKIDSPARIATIRNRL 913
>gi|27376027|ref|NP_767556.1| PII uridylyl-transferase [Bradyrhizobium japonicum USDA 110]
gi|27349166|dbj|BAC46181.1| bifunctional uridylyltransferase/uridylyl-removing enzyme
[Bradyrhizobium japonicum USDA 110]
Length = 997
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL E+ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 913 SDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIN 971
Query: 173 DPKRLSTIKELLFNVLRG 190
P R S IK L +V+ G
Sbjct: 972 APTRQSAIKSALTHVMAG 989
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 904 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 963
Query: 75 DCDGKKI 81
D G +I
Sbjct: 964 DLLGAQI 970
>gi|269960589|ref|ZP_06174961.1| [Protein-PII] uridylyltransferase [Vibrio harveyi 1DA3]
gi|269834666|gb|EEZ88753.1| [Protein-PII] uridylyltransferase [Vibrio harveyi 1DA3]
Length = 874
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 20/181 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L+R +P P V+I T + V S ++ + V+ L+ N + A I +S
Sbjct: 670 LLRMEDPSKPLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAPS------LRSSVG 109
G+ +D F V+D GK I R V +I LE P+ +++ V
Sbjct: 730 GYVLDTFMVLDQHGKAIEEGRHSAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKVD 789
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ + T +EF D PGL ++V ADL N+ A+I T +RA + +T +
Sbjct: 790 FLPTKSKKRTLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAG 849
Query: 168 G 168
G
Sbjct: 850 G 850
>gi|17226253|gb|AAL37712.1|AF397025_2 uridylyltransferase [Gluconacetobacter diazotrophicus PAl 5]
Length = 990
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRVVIDN TVI+++ ++ G+L V Q ++D L I A+I++ G +DVF V
Sbjct: 886 PPRVVIDNRASNTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRAVDVFYV 945
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G KI D+ + I++ L
Sbjct: 946 KDLFGLKITDERRLGEIREAL 966
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ +T IE G DRPGL +V ++D + +A I T+ RA V +V D G I
Sbjct: 896 SNTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRAVDVFYVKD-LFGLKIT 954
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTS-LSPPG 205
D +RL I+E L + LR ++ A TS + PP
Sbjct: 955 DERRLGEIREALLHGLRQAEE---AMTSEIGPPA 985
Score = 37.0 bits (84), Expect = 10.0, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 39/90 (43%)
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+P T + D PGLFS + LA ++V+A I T + A + G A
Sbjct: 781 LPARGVTEVTIYTADHPGLFSRMAGALAIAGASIVDARIHTLINGMALDTFWIQDAGGEA 840
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTS 200
++P +L+ + L+ L G D K S
Sbjct: 841 FEEPHQLARLSALVEQALSGRVDIPKEIVS 870
>gi|367474181|ref|ZP_09473703.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
ORS 285]
gi|365273525|emb|CCD86171.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
ORS 285]
Length = 931
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Query: 80 KIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLAD 139
K+R + + R + +F+ S+ +E +T IE +G DRPGL E+ ++
Sbjct: 813 KLRLPDAVARRTTRGKQHKAFSVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISK 872
Query: 140 LHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYD 192
L+ N+ +A + T +RA V +VTD G I P R + IK L ++L D
Sbjct: 873 LNLNIASAHVATFGERARDVFYVTD-LLGAQINAPTRQAAIKSALLHLLASED 924
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 837 PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 75 DCDGKKI 81
D G +I
Sbjct: 897 DLLGAQI 903
>gi|260775287|ref|ZP_05884184.1| [Protein-PII] uridylyltransferase [Vibrio coralliilyticus ATCC
BAA-450]
gi|260608468|gb|EEX34633.1| [Protein-PII] uridylyltransferase [Vibrio coralliilyticus ATCC
BAA-450]
Length = 873
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 78/172 (45%), Gaps = 18/172 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P ++I T + V S ++H + V+ L+ N + A + +S G+ +D F V
Sbjct: 679 PLILISKKATRGGTEVFVYSRDQHALFATVVAELDRRNFNVHDAQVMTSKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE--EH 116
+D G+ + R K VI ++ L+ P +++ V +PT+ +
Sbjct: 739 LDQHGQAVHESRHKAVIKHLAHVLKDGRPTKIKTRRVPRNLQHFKVKTRVDFLPTKSKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +EF D PGL + V A ADL ++ A+I T +RA + +T G
Sbjct: 799 TLMEFVALDTPGLLATVGATFADLDLHLHAAKITTIGERAEDLFIITSEQGG 850
>gi|92115857|ref|YP_575586.1| PII uridylyl-transferase [Nitrobacter hamburgensis X14]
gi|122418861|sp|Q1QRM1.1|GLND_NITHX RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|91798751|gb|ABE61126.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Nitrobacter
hamburgensis X14]
Length = 931
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ HT IE +G DRPGL ++ A ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 846 SDRHTVIEVSGLDRPGLLFQLTAAISKLNLNIASAHVATFGERARDVFYVTD-LLGARIT 904
Query: 173 DPKRLSTIKELLFNVL 188
P R + IK L ++L
Sbjct: 905 APTRQAAIKRALIHLL 920
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 11 RMNP----PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGW 66
R+ P P+V+++N TVI+V +++ G+L Q+ ++ +NL I A++++ G
Sbjct: 829 RLRPFVVEPKVIVNNQWSDRHTVIEVSGLDRPGLLFQLTAAISKLNLNIASAHVATFGER 888
Query: 67 FMDVFNVIDCDGKKI 81
DVF V D G +I
Sbjct: 889 ARDVFYVTDLLGARI 903
>gi|162147864|ref|YP_001602325.1| PII uridylyl-transferase [Gluconacetobacter diazotrophicus PAl 5]
gi|209542483|ref|YP_002274712.1| PII uridylyl-transferase [Gluconacetobacter diazotrophicus PAl 5]
gi|161786441|emb|CAP56023.1| putative uridylyltransferase (PII uridylyl transferase)
(Uridylyl-removing enzyme) (UTase) [Gluconacetobacter
diazotrophicus PAl 5]
gi|209530160|gb|ACI50097.1| UTP-GlnB uridylyltransferase, GlnD [Gluconacetobacter
diazotrophicus PAl 5]
Length = 989
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRVVIDN TVI+++ ++ G+L V Q ++D L I A+I++ G +DVF V
Sbjct: 885 PPRVVIDNRASNTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRAVDVFYV 944
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G KI D+ + I++ L
Sbjct: 945 KDLFGLKITDERRLGEIREAL 965
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ +T IE G DRPGL +V ++D + +A I T+ RA V +V D G I
Sbjct: 895 SNTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRAVDVFYVKD-LFGLKIT 953
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTS-LSPPG 205
D +RL I+E L + LR ++ A TS + PP
Sbjct: 954 DERRLGEIREALLHGLRQAEE---AMTSEIGPPA 984
>gi|254229487|ref|ZP_04922901.1| [Protein-PII] uridylyltransferase [Vibrio sp. Ex25]
gi|151937952|gb|EDN56796.1| [Protein-PII] uridylyltransferase [Vibrio sp. Ex25]
Length = 301
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 20/181 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L+R +P P V+I T + V + ++ + V+ L+ N + A I +S
Sbjct: 97 LLRMEDPTKPLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNFNVHDAQIMTSKD 156
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLET------DASFAPS------LRSSVG 109
G +D F V+D G+ I R VI ++ LE P+ +++ V
Sbjct: 157 GHVIDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTKVD 216
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ +HT +EF D PGL ++V ADL+ N+ A+I T +RA + +T +
Sbjct: 217 FLPTKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSDAG 276
Query: 168 G 168
G
Sbjct: 277 G 277
>gi|115487380|ref|NP_001066177.1| Os12g0152700 [Oryza sativa Japonica Group]
gi|77553037|gb|ABA95833.1| ACT domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113648684|dbj|BAF29196.1| Os12g0152700 [Oryza sativa Japonica Group]
gi|215704512|dbj|BAG94145.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222616648|gb|EEE52780.1| hypothetical protein OsJ_35248 [Oryza sativa Japonica Group]
Length = 279
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 41/213 (19%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ DAT++++ ++ G LL ++ L D+ L + K +S++ F+++
Sbjct: 75 PVVLIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVTKGSVSTESAVTQTKFHIM 134
Query: 75 DCDGKKIRDKEVIDYI---------QQRLETDASF---------APSLRSSVGVMPTEEH 116
G+K+ D + ++ I Q E+ + AP + V V+ H
Sbjct: 135 RS-GRKVEDPDTLEKIRLTVINNLLQYHPESSENLAMGEFFGIKAPEKKVDVDVV---TH 190
Query: 117 TSIEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
+E G DRPGL E+ ++ D++ +V +AEI T A HV+
Sbjct: 191 VIVEDDGPKRSMLYIETADRPGLLLEIVKIITDVNVDVESAEIDTEGLVAKDKFHVS--- 247
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
+ K S++ ++L N LR Y R+ +T
Sbjct: 248 ----YRGAKLNSSLSQVLVNCLRYY--LRRPET 274
>gi|341613492|ref|ZP_08700361.1| PII uridylyl-transferase [Citromicrobium sp. JLT1363]
Length = 918
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 52/182 (28%), Positives = 83/182 (45%), Gaps = 23/182 (12%)
Query: 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVIDCDGKKIRDKE 85
AT++ V + + GI +++ ++ V I A I ++ G+ +D F V D G++ +
Sbjct: 725 ATLVTVIAADHPGIFMRIAGAIHLVGGNIIDARIHTTRTGYAVDNFLVQDPLGQRFGEDN 784
Query: 86 VIDYIQQR----LETDASFAPSL---------------RSSVGVMPTEEH--TSIEFTGT 124
++ I++ LE A P L R SV H T IE +
Sbjct: 785 QLERIERSIADALERGAQLVPKLAQRPLPRRGAGAFDVRPSVAFDNDASHRFTVIEVSAR 844
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
DRP L + + L + H + +A I + +RAA +VTD TG I DP RL TI+ L
Sbjct: 845 DRPALLNRLARALFEHHAMIRSAHITHYGERAADTFYVTD-LTGDKITDPSRLETIRAAL 903
Query: 185 FN 186
+
Sbjct: 904 VD 905
Score = 40.4 bits (93), Expect = 0.84, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 44/85 (51%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V DN+ TVI+V + ++ +L ++ + L + + +I+ A+I+ G D F V
Sbjct: 824 PSVAFDNDASHRFTVIEVSARDRPALLNRLARALFEHHAMIRSAHITHYGERAADTFYVT 883
Query: 75 DCDGKKIRDKEVIDYIQQRLETDAS 99
D G KI D ++ I+ L AS
Sbjct: 884 DLTGDKITDPSRLETIRAALVDAAS 908
>gi|326503882|dbj|BAK02727.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 425
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 89/187 (47%), Gaps = 18/187 (9%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDVFNVI 74
V +DN+ T+I++ + G+L +++ + D N+ + + Y G +D+F V
Sbjct: 246 VTMDNSLSPVHTLIQIQCGDHKGLLYDIMRTVKDCNIQVSYGRFYAGQKGRCEVDLFAV- 304
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFS 131
DGKKI D++ + RL T+ P + V P E +E +G RP +F
Sbjct: 305 QSDGKKILDQQKQRTMCSRLRTEL-LRPLHVALVNRGPDAELLVANPVEVSGKGRPLVFY 363
Query: 132 EVCAVLADLHCNVVNAEIWTH--NDRAAAV--VHVT--DHSTGYAIKDPKRLSTIKELLF 185
++ L +LH V AEI H NDR V VH+ DH +++ S I + +
Sbjct: 364 DITLALKNLHRRVFLAEIGRHMVNDREWEVYRVHLGEDDHELSCSVR-----SKIVDSVT 418
Query: 186 NVLRGYD 192
N+L G+D
Sbjct: 419 NMLMGWD 425
>gi|146337664|ref|YP_001202712.1| PII uridylyl-transferase [Bradyrhizobium sp. ORS 278]
gi|166226140|sp|A4YKP3.1|GLND_BRASO RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|146190470|emb|CAL74469.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
ORS 278]
Length = 931
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Query: 80 KIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLAD 139
K+R + + R + +F+ S+ +E +T IE +G DRPGL E+ ++
Sbjct: 813 KLRLPDAVARRTTRGKQHKAFSVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISK 872
Query: 140 LHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYD 192
L+ N+ +A + T +RA V +VTD G I P R + IK L ++L D
Sbjct: 873 LNLNIASAHVATFGERARDVFYVTD-LLGAQINAPTRQAAIKSALLHLLASED 924
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 837 PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 75 DCDGKKI 81
D G +I
Sbjct: 897 DLLGAQI 903
>gi|359788247|ref|ZP_09291225.1| PII uridylyl-transferase [Mesorhizobium alhagi CCNWXJ12-2]
gi|359255938|gb|EHK58828.1| PII uridylyl-transferase [Mesorhizobium alhagi CCNWXJ12-2]
Length = 935
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
I+ +G DRPGL SE+ L+DL ++ +A I T ++ +V+D TG I +P RL
Sbjct: 849 IDVSGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYVSD-LTGQKIDNPARLK 907
Query: 179 TIKELLFNVLRGYDDFRKAK 198
TI++ L L+G R K
Sbjct: 908 TIRDRLIATLQGEAGQRGVK 927
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I N +VI V +++ G+L ++ L+D++L I A+I++ G +D F V
Sbjct: 834 PRVDIRNTLSNRFSVIDVSGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYVS 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G+KI + + I+ RL
Sbjct: 894 DLTGQKIDNPARLKTIRDRL 913
>gi|402850071|ref|ZP_10898284.1| [Protein-PII] uridylyltransferase [Rhodovulum sp. PH10]
gi|402499632|gb|EJW11331.1| [Protein-PII] uridylyltransferase [Rhodovulum sp. PH10]
Length = 938
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 107 SVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
SV + +T +E +G DRPGL E+ + L+ L+ N+ +A + T +RA V ++TD
Sbjct: 842 SVNNQWSHRYTVVEVSGLDRPGLLYELTSTLSKLNLNITSAHVATFGERAVDVFYITD-L 900
Query: 167 TGYAIKDPKRLSTIKELLF 185
G I P R++TIK L
Sbjct: 901 MGARITSPTRIATIKRALL 919
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ++N TV++V +++ G+L ++ L+ +NL I A++++ G +DVF +
Sbjct: 839 PEVSVNNQWSHRYTVVEVSGLDRPGLLYELTSTLSKLNLNITSAHVATFGERAVDVFYIT 898
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAP 102
D G +I I I++ L FAP
Sbjct: 899 DLMGARITSPTRIATIKRALLL--PFAP 924
>gi|170740425|ref|YP_001769080.1| PII uridylyl-transferase [Methylobacterium sp. 4-46]
gi|168194699|gb|ACA16646.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium sp. 4-46]
Length = 936
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 9/105 (8%)
Query: 101 APSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVV 160
AP L S+ + T +E +G DRPGL ++ L+ L+ N+ +A + T +RA V
Sbjct: 821 APDL--SIDNALSSRETVLEISGLDRPGLLYDLTTALSRLNLNITSAHVATFGERAVDVF 878
Query: 161 HVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPG 205
+VTD TG I P R +TI+ + V G D A+ PPG
Sbjct: 879 YVTD-LTGTKITQPDRQATIRRAVMGVFEG--DAAAAR----PPG 916
Score = 42.7 bits (99), Expect = 0.18, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P + IDN + TV+++ +++ G+L + L+ +NL I A++++ G +DVF V
Sbjct: 822 PDLSIDNALSSRETVLEISGLDRPGLLYDLTTALSRLNLNITSAHVATFGERAVDVFYVT 881
Query: 75 DCDGKKI 81
D G KI
Sbjct: 882 DLTGTKI 888
>gi|262276529|ref|ZP_06054338.1| [Protein-PII] uridylyltransferase [Grimontia hollisae CIP 101886]
gi|262220337|gb|EEY71653.1| [Protein-PII] uridylyltransferase [Grimontia hollisae CIP 101886]
Length = 873
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 89/192 (46%), Gaps = 20/192 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V+I N T I V S +K + +V+ L+ NL + A I +S G+ +D F V
Sbjct: 680 PLVLISKNATRGGTEIFVYSEDKPSLFARVVAALDKRNLSVHDAQIMTSKDGFALDTFMV 739
Query: 74 IDCDGKKI---RDKEVIDYIQQRLETDASF------AP------SLRSSVGVMPTE--EH 116
+D + + I R + + + + L + + AP +++ V +PT
Sbjct: 740 LDANNEAIQPDRHDRIRESVAEALMQEGAITIPVKRAPRKLMAFKVKTQVNFLPTRIGRR 799
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +E D PGL ++V AV A ++ A+I T +RA VTD A+ D +
Sbjct: 800 TLLELIALDTPGLLAKVGAVFAREGVSLQAAKITTIGERAEDFFIVTD-GERQALTDEAQ 858
Query: 177 LSTIKELLFNVL 188
+++K LF+ L
Sbjct: 859 -TSLKNALFDAL 869
>gi|222642143|gb|EEE70275.1| hypothetical protein OsJ_30424 [Oryza sativa Japonica Group]
Length = 473
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 86/188 (45%), Gaps = 21/188 (11%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDVFNVI 74
V +DN+ T+I++ + G++ +++ L D N+ I + Y S +G +D+F +
Sbjct: 292 VAMDNSLSPAHTLIQIQCGDHKGLVYDIMRTLKDCNIQISYGRFYASQNGSCEVDLF-AV 350
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFS 131
DGKKI D+ + RL T+ P + V P E +E +G RP +F
Sbjct: 351 QSDGKKIVDQHKQRALCCRLRTEL-HRPLRVALVNRGPDTELLVANPVEVSGKGRPLVFY 409
Query: 132 EVCAVLADLHCNVVNAEIWTH--NDRAAAVVHV----TDHSTGYAIKDPKRLSTIKELLF 185
++ L LH + AEI H DR V V DHS+ S I + +
Sbjct: 410 DITLALKKLHKRIFLAEIGRHVVGDREWEVYRVHLGEGDHSS--------LRSKIVDGVT 461
Query: 186 NVLRGYDD 193
N+L G+DD
Sbjct: 462 NMLMGWDD 469
>gi|424039494|ref|ZP_17777859.1| protein-P-II uridylyltransferase [Vibrio cholerae HENC-02]
gi|408892923|gb|EKM30271.1| protein-P-II uridylyltransferase [Vibrio cholerae HENC-02]
Length = 874
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 20/181 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L+R +P P V+I T + V S ++ + V+ L+ N + A I +S
Sbjct: 670 LLRMEDPAKPLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAPS------LRSSVG 109
G+ +D F V+D GK I R V +I LE P+ +++ V
Sbjct: 730 GYVLDTFMVLDQHGKAIEEGRHGAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKVD 789
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ + T +EF D PGL ++V ADL N+ A+I T +RA + +T +
Sbjct: 790 FLPTKSKKRTLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAG 849
Query: 168 G 168
G
Sbjct: 850 G 850
>gi|224097618|ref|XP_002311013.1| predicted protein [Populus trichocarpa]
gi|222850833|gb|EEE88380.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 100/211 (47%), Gaps = 35/211 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ +++T++++ ++ G L+ + L D+ L + K + ++G F +
Sbjct: 12 PVVLIDQDSDSESTIVQLSFGDRLGALIDTMNALKDLGLDVAKGTVLTEGPVKQTKFFIT 71
Query: 75 DCD-GKKIRDKEVIDYIQQ-------RLETDASFAPSLRSSVGVMPTEEHTSIEFTG--- 123
D G+K+ D ++++ I+ + ++S ++ + G+ E+ ++ T
Sbjct: 72 RLDSGRKVEDPDMLERIRLTIINNLLKYHPESSERLAMGEAFGIKAPEKKLDVDITTHVH 131
Query: 124 ---------------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
DRPGL E+ ++AD++ +V +AEI T A HV+ G
Sbjct: 132 VKEDGPKRSLLCVETADRPGLLVEIIKIIADVNIDVESAEIDTEGLVAKDKFHVS--YGG 189
Query: 169 YAIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
A+ S++ ++L N LR Y R+ +T
Sbjct: 190 AALN-----SSLSQVLVNCLRYY--LRRPET 213
>gi|386399179|ref|ZP_10083957.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. WSM1253]
gi|385739805|gb|EIG60001.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. WSM1253]
Length = 929
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL E+ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 845 SDRYTVIEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIS 903
Query: 173 DPKRLSTIKELLFNVLRG 190
P R + IK L +V+ G
Sbjct: 904 APTRQAAIKSALTHVMAG 921
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI++ +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 836 PEVTINNQWSDRYTVIEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895
Query: 75 DCDGKKI 81
D G +I
Sbjct: 896 DLLGAQI 902
>gi|424033774|ref|ZP_17773185.1| protein-P-II uridylyltransferase [Vibrio cholerae HENC-01]
gi|408873887|gb|EKM13070.1| protein-P-II uridylyltransferase [Vibrio cholerae HENC-01]
Length = 874
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 20/181 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L+R +P P V+I T + V S ++ + V+ L+ N + A I +S
Sbjct: 670 LLRMEDPAKPLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAPS------LRSSVG 109
G+ +D F V+D GK I R V +I LE P+ +++ V
Sbjct: 730 GYVLDTFMVLDQHGKAIEEGRHGAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKVD 789
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ + T +EF D PGL ++V ADL N+ A+I T +RA + +T +
Sbjct: 790 FLPTKSKKRTLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAG 849
Query: 168 G 168
G
Sbjct: 850 G 850
>gi|148258814|ref|YP_001243399.1| PII uridylyl-transferase [Bradyrhizobium sp. BTAi1]
gi|166226139|sp|A5ETJ9.1|GLND_BRASB RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|146410987|gb|ABQ39493.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. BTAi1]
Length = 931
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 80 KIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLAD 139
K+R + + R + +F+ S+ +E +T IE +G DRPGL E+ ++
Sbjct: 813 KLRLPDAVARRTTRGKQHKAFSVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISK 872
Query: 140 LHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
L+ N+ +A + T +RA V +VTD G I P R + IK L ++L
Sbjct: 873 LNLNIASAHVATFGERARDVFYVTD-LLGAQINAPTRQAAIKSALLHLL 920
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 837 PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 75 DCDGKKI 81
D G +I
Sbjct: 897 DLLGAQI 903
>gi|83313575|ref|YP_423839.1| PII uridylyl-transferase [Magnetospirillum magneticum AMB-1]
gi|82948416|dbj|BAE53280.1| UTP:GlnB (protein PII) uridylyltransferase [Magnetospirillum
magneticum AMB-1]
Length = 929
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV++DN TV++V+ ++ G+L + + +V L I A+IS+ G +DVF V
Sbjct: 826 PPRVLVDNMPSRSHTVVEVNGRDRPGLLYDITNAMTNVGLQISSAHISTYGERVVDVFYV 885
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G KI +D I+ L
Sbjct: 886 KDVFGHKIEHGRKLDQIKAAL 906
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
MP+ HT +E G DRPGL ++ + ++ + +A I T+ +R V +V D G+
Sbjct: 834 MPSRSHTVVEVNGRDRPGLLYDITNAMTNVGLQISSAHISTYGERVVDVFYVKD-VFGHK 892
Query: 171 IKDPKRLSTIKELLFNVL 188
I+ ++L IK L L
Sbjct: 893 IEHGRKLDQIKAALLAAL 910
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 101 APSLRSSVGVMP-TEEHTSIE----FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
A ++R+ + V P + H ++ +TG D PGLFS++ +A N+V+A+I T +
Sbjct: 708 AEAVRAPLTVEPRVDSHRAVTEIIVYTG-DHPGLFSQIAGAMAVSGANIVDAKIITLANG 766
Query: 156 AAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRG 190
A S G A P +L+ + + VL G
Sbjct: 767 MALDTFCIQDSDGGAFDSPAKLAKLATCVEQVLSG 801
>gi|365884301|ref|ZP_09423359.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
ORS 375]
gi|365287146|emb|CCD95890.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
ORS 375]
Length = 931
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 80 KIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLAD 139
K+R + + R + +F+ S+ +E +T IE +G DRPGL E+ ++
Sbjct: 813 KLRLPDAVARRTTRGKQHKAFSVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISK 872
Query: 140 LHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
L+ N+ +A + T +RA V +VTD G I P R + IK L ++L
Sbjct: 873 LNLNIASAHVATFGERARDVFYVTD-LLGAQINAPTRQAAIKSALLHLL 920
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 837 PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 75 DCDGKKI 81
D G +I
Sbjct: 897 DLLGAQI 903
>gi|418055379|ref|ZP_12693434.1| UTP-GlnB uridylyltransferase, GlnD [Hyphomicrobium denitrificans
1NES1]
gi|353210961|gb|EHB76362.1| UTP-GlnB uridylyltransferase, GlnD [Hyphomicrobium denitrificans
1NES1]
Length = 932
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 55/93 (59%), Gaps = 5/93 (5%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+I+N+ TVI+V ++ G+L ++ VL+D++L I A++++ G +DVF V
Sbjct: 834 PEVIINNDLSGRLTVIEVSGRDRPGLLYELTSVLSDLSLDIASAHVTTFGEKAVDVFYVT 893
Query: 75 DCDGKKI----RDKEVIDYIQQ-RLETDASFAP 102
D GK+I R + + D +Q L+ DA AP
Sbjct: 894 DLVGKQILSEVRQRAIRDRLQSVMLDKDAPVAP 926
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE +G DRPGL E+ +VL+DL ++ +A + T ++A V +VTD G I R
Sbjct: 847 TVIEVSGRDRPGLLYELTSVLSDLSLDIASAHVTTFGEKAVDVFYVTD-LVGKQILSEVR 905
Query: 177 LSTIKELLFNVL 188
I++ L +V+
Sbjct: 906 QRAIRDRLQSVM 917
>gi|194701562|gb|ACF84865.1| unknown [Zea mays]
gi|413916121|gb|AFW56053.1| ACT domain containing protein [Zea mays]
Length = 271
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 35/210 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ID ++ DAT++++ ++ G LL ++ L D+ L + K +++D F+++
Sbjct: 67 PVVQIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVSKGSVATDSAVTQTKFHIM 126
Query: 75 DCDGKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMPT--------EEHTSI 119
G+K+ D ++++ I+ + ++S ++ G+ P H +
Sbjct: 127 RF-GRKVEDPDMLERIRLTIINNLLQYHPESSEKLAMGEFFGIKPPVKKVDIDIATHIVV 185
Query: 120 EFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
E G DRPGL E+ ++AD + +V +AEI T A HV+
Sbjct: 186 EDDGPKRSMLYIETADRPGLLLEIIKIIADTNIDVESAEIDTEGLVAKDKFHVS------ 239
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
+ K S+ ++L N LR Y R+ +T
Sbjct: 240 -YRGAKLNSSSSQVLINCLRYY--LRRPET 266
>gi|365892864|ref|ZP_09431099.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
STM 3809]
gi|365331013|emb|CCE03630.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
STM 3809]
Length = 931
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 80 KIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLAD 139
K+R + + R + +F+ S+ +E +T IE +G DRPGL E+ ++
Sbjct: 813 KLRLPDAVARRTTRGKQHKAFSVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISK 872
Query: 140 LHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
L+ N+ +A + T +RA V +VTD G I P R + IK L ++L
Sbjct: 873 LNLNIASAHVATFGERARDVFYVTD-LLGAQINAPTRQAAIKSALLHLL 920
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 837 PEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 75 DCDGKKI 81
D G +I
Sbjct: 897 DLLGAQI 903
>gi|336123498|ref|YP_004565546.1| [protein-PII] uridylyltransferase [Vibrio anguillarum 775]
gi|335341221|gb|AEH32504.1| [protein-PII] uridylyltransferase [Vibrio anguillarum 775]
Length = 874
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 92/197 (46%), Gaps = 22/197 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L++ +P P +++ T + V + ++ + V+ L+ NL + A I SS
Sbjct: 670 LLKHSDPSQPLILMSKKATRGGTELFVYTKDQPALFATVVAELDRRNLNVHDAQIMSSKD 729
Query: 65 GWFMDVFNVIDCDGKKIRDK---EVIDYIQQRLETDASFAPSLR------------SSVG 109
G+ +D F V+D +G I ++ +I ++ LET LR + V
Sbjct: 730 GYVLDTFMVLDQNGHAIDEECHPSLIKHLLSGLETGWQNKLKLRRTPRNLQHFKVKTKVD 789
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ + T +E D PGL + V A ADL+ N+ A+I T +RA + +T
Sbjct: 790 FLPTKSNKRTLMELVALDTPGLLATVGATFADLNINLHGAKITTIGERAEDLFILTGSQG 849
Query: 168 GYAIKDPKRLSTIKELL 184
G ++ + T++E+L
Sbjct: 850 GKLSEEEE--CTLREML 864
>gi|449439743|ref|XP_004137645.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Cucumis sativus]
Length = 292
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 84/177 (47%), Gaps = 30/177 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ DATV+++ ++ G LL + L ++ L + KA + D + F++
Sbjct: 86 PIVIIDQDSDQDATVVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNRFSIT 145
Query: 75 DCD-GKKIRDKEVID---------YIQQRLETDASFAPSLRSSVGVMPTEE--------H 116
D G+K+ D E+++ IQ E+ A A + ++ GV+P ++ H
Sbjct: 146 KADTGRKVDDPELLEAIRLTIINNLIQYHPESSAQLA--MGAAFGVVPPKQQVDVDIATH 203
Query: 117 TSIEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT 163
+++ G DRPGL ++ ++ D++ V + E T A A HV+
Sbjct: 204 INVQDDGPDRSLLYVETADRPGLLVDLVKIITDINVAVESGEFDTEGLLAKAKFHVS 260
>gi|357437023|ref|XP_003588787.1| Translation factor EF-1 alpha - like protein [Medicago
truncatula]
gi|355477835|gb|AES59038.1| Translation factor EF-1 alpha - like protein [Medicago
truncatula]
Length = 168
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Query: 16 RVVIDNNTCADATVIKVDSVNKH-GILLQVIQVLNDVNLVIKKAYISSD 63
+V IDN + D TV+KVDSVNKH G+LL ++ VL D+N I K+YISSD
Sbjct: 29 QVCIDNESKEDCTVVKVDSVNKHGGVLLDMLHVLTDMNFQIIKSYISSD 77
>gi|255560331|ref|XP_002521182.1| amino acid binding protein, putative [Ricinus communis]
gi|223539629|gb|EEF41213.1| amino acid binding protein, putative [Ricinus communis]
Length = 214
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 98/211 (46%), Gaps = 35/211 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P ++ID ++ +DAT ++V ++ G L+ ++ L D+ L + K + ++G F +
Sbjct: 8 PVLLIDQDSDSDATSVQVSFGDRLGALIDTMKALKDLGLDVAKGSVLTEGSVKQIKFFIT 67
Query: 75 DCD-GKKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEEHTSIEFT---- 122
D G+K+ D ++++ I+ + ++S ++ + G+ E ++
Sbjct: 68 RLDSGRKVEDPDMLERIRLTIINNLLKYHPESSEQLAMGEAFGIKAPERKLDVDIATHIH 127
Query: 123 --------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
DRPGL E+ ++AD++ +V +AEI T A HV+ G
Sbjct: 128 VKDDGPKRSLLYIETADRPGLLVEMIKIMADINVDVESAEIDTEGLVAKDKFHVS--YRG 185
Query: 169 YAIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
A+ S++ ++L N LR Y R+ +T
Sbjct: 186 AALN-----SSMSQVLVNCLRYY--LRRPET 209
>gi|220921155|ref|YP_002496456.1| PII uridylyl-transferase [Methylobacterium nodulans ORS 2060]
gi|219945761|gb|ACL56153.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium nodulans ORS
2060]
Length = 1029
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 101 APSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVV 160
AP L S+ + T +E +G DRPGL E+ L+ L+ N+ +A + T +R V
Sbjct: 919 APDL--SIDNALSSRETVLEISGLDRPGLLYELTTALSRLNLNITSAHVATFGERVVDVF 976
Query: 161 HVTDHSTGYAIKDPKRLSTIKELLFNVLRG 190
+VTD TG I P R +TI+ + V G
Sbjct: 977 YVTD-LTGTKITQPDRQATIRRAVMGVFEG 1005
Score = 44.3 bits (103), Expect = 0.057, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P + IDN + TV+++ +++ G+L ++ L+ +NL I A++++ G +DVF V
Sbjct: 920 PDLSIDNALSSRETVLEISGLDRPGLLYELTTALSRLNLNITSAHVATFGERVVDVFYVT 979
Query: 75 DCDGKKI 81
D G KI
Sbjct: 980 DLTGTKI 986
>gi|365540549|ref|ZP_09365724.1| PII uridylyl-transferase [Vibrio ordalii ATCC 33509]
Length = 874
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 92/197 (46%), Gaps = 22/197 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L++ +P P +++ T + V + ++ + V+ L+ NL + A I SS
Sbjct: 670 LLKHSDPSQPLILMSKKATRGGTELFVYTKDQPALFATVVAELDRRNLNVHDAQIMSSKD 729
Query: 65 GWFMDVFNVIDCDGKKIRDKE---VIDYIQQRLETDASFAPSLR------------SSVG 109
G+ +D F V+D +G I ++ +I ++ L T LR + V
Sbjct: 730 GYVLDTFMVLDQNGHAIDEESHPSLIKHLLNGLYTGWQNKLKLRRTPRNLQHFKVKTKVD 789
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ + T +EF D PGL + V A ADL+ N+ A+I T +RA + +T
Sbjct: 790 FLPTKSNKRTLMEFVALDTPGLLATVGATFADLNINLHGAKITTIGERAEDLFILTGSQG 849
Query: 168 GYAIKDPKRLSTIKELL 184
G ++ + T++E+L
Sbjct: 850 GKLSEEEE--CTLREIL 864
>gi|300024976|ref|YP_003757587.1| UTP-GlnB uridylyltransferase [Hyphomicrobium denitrificans ATCC
51888]
gi|299526797|gb|ADJ25266.1| UTP-GlnB uridylyltransferase, GlnD [Hyphomicrobium denitrificans
ATCC 51888]
Length = 932
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P +VI+N TVI+V ++ G+L ++ L+D++L I A++++ G +DVF V
Sbjct: 834 PEIVINNELSERLTVIEVSGRDRPGLLYELTSALSDLSLDIASAHVTTFGEKAVDVFYVT 893
Query: 75 DCDGKK----IRDKEVIDYIQQ-RLETDASFAP 102
D GK+ +R + + D +Q L+ DAS AP
Sbjct: 894 DLTGKQVVSEVRQRTIRDRLQTILLDNDASVAP 926
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+E T IE +G DRPGL E+ + L+DL ++ +A + T ++A V +VTD TG +
Sbjct: 843 SERLTVIEVSGRDRPGLLYELTSALSDLSLDIASAHVTTFGEKAVDVFYVTD-LTGKQVV 901
Query: 173 DPKRLSTIKELLFNVL 188
R TI++ L +L
Sbjct: 902 SEVRQRTIRDRLQTIL 917
>gi|226530840|ref|NP_001151043.1| ACT domain containing protein [Zea mays]
gi|195643854|gb|ACG41395.1| ACT domain containing protein [Zea mays]
Length = 273
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 35/210 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ID ++ DAT++++ ++ G LL ++ L D+ L + K +++D F+++
Sbjct: 69 PVVQIDQDSDRDATIVQLSFGDRLGALLDTMKALKDLGLDVSKGSVATDSAVTQTKFHIM 128
Query: 75 DCDGKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMP--------TEEHTSI 119
G+K+ D ++++ I+ + ++S ++ G+ P H +
Sbjct: 129 RF-GRKVEDPDMLERIRLTIINNLLQYHPESSEKLAMGEFFGIKPPVKKVDIDIATHIVV 187
Query: 120 EFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
E G DRPGL E+ ++AD + +V +AEI T A HV+
Sbjct: 188 EDDGPKRSMLYIETADRPGLLLEIIKIIADTNIDVESAEIDTEGLVAKDKFHVS------ 241
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
+ K S+ ++L N LR Y R+ +T
Sbjct: 242 -YRGAKLNSSSSQVLINCLRYY--LRRPET 268
>gi|297599874|ref|NP_001048007.2| Os02g0729500 [Oryza sativa Japonica Group]
gi|255671227|dbj|BAF09921.2| Os02g0729500 [Oryza sativa Japonica Group]
Length = 159
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 67 FMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDR 126
FMDVF+V D G K+ + VI YI+Q L M E T++E TG R
Sbjct: 87 FMDVFHVTDRLGCKLTNDSVITYIEQSLGM-------WNGPTRPMALEGLTALELTGAGR 139
Query: 127 PGLFSEVCAVLADLHCN 143
GL SEV AVLAD+ C
Sbjct: 140 TGLISEVFAVLADMDCE 156
>gi|354594396|ref|ZP_09012435.1| PII uridylyl-transferase [Commensalibacter intestini A911]
gi|353672072|gb|EHD13772.1| PII uridylyl-transferase [Commensalibacter intestini A911]
Length = 975
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 5 YAKLIRRMN-PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD 63
Y + +R ++ PPRVVIDN TVI+V+ ++ G+L V + + + L I A+I++
Sbjct: 851 YGRRMRAIHVPPRVVIDNQASNGFTVIEVNGRDRIGLLYDVTKTIKEQKLQISSAHITTY 910
Query: 64 GGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
G +DVF V D G K++D++ + +++
Sbjct: 911 GIRAVDVFYVKDVFGLKVQDRKRLSIVRE 939
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 44/106 (41%), Gaps = 3/106 (2%)
Query: 93 RLETDA--SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIW 150
RL TDA + AP L +P T + D PGLFS++ LA ++V+A I
Sbjct: 736 RLITDAHKTEAP-LTIRTYPLPDRGVTEVTVYAGDHPGLFSKISGALAVAGASIVDARIH 794
Query: 151 THNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRK 196
T + + DP RL I EL+ L G D K
Sbjct: 795 TLTNGMVLDTFWIQDAAQDVFDDPHRLERIIELINTALAGTVDIEK 840
>gi|359483143|ref|XP_003632910.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Vitis vinifera]
gi|298204773|emb|CBI25271.3| unnamed protein product [Vitis vinifera]
Length = 291
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 95/203 (46%), Gaps = 33/203 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V+ID ++ +AT++++ ++ G LL + L ++ L + KA + D + F +
Sbjct: 85 PKVIIDQDSDPNATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNTFAIT 144
Query: 75 DCD-GKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMPTEE--------HTS 118
D G+K+ D E+++ I+ + ++S ++ + G+ P ++ H S
Sbjct: 145 KADTGRKVEDPELLEAIRLTIINNMLQYHPESSEQLAMGVAFGITPPKQQVDVDIATHIS 204
Query: 119 IEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ G DRPGL ++ + D++ +V + E T A A HV+ G
Sbjct: 205 VNDDGPDRSLLYVETADRPGLLVDLVKSITDINIDVESGEFDTEGLLAKAKFHVSYR--G 262
Query: 169 YAIKDPKRLSTIKELLFNVLRGY 191
AI P ++++L N LR +
Sbjct: 263 KAIIKP-----LQQVLGNSLRYF 280
>gi|192362270|ref|YP_001981600.1| PII uridylyl-transferase [Cellvibrio japonicus Ueda107]
gi|190688435|gb|ACE86113.1| protein-P-II uridylyltransferase [Cellvibrio japonicus Ueda107]
Length = 905
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 25/194 (12%)
Query: 5 YAKLIRRMNPPRVVID---NNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI- 60
+A R + P V+I N A AT I V S ++ + + V L +NL I+ A I
Sbjct: 692 HAIAARTDDQPLVLIKKTANKELAGATQIFVYSKDQKNVFVAVATALAQLNLSIQDAKIY 751
Query: 61 SSDGGWFMDVFNVIDCDGKKI-RDKEVIDYIQQRLETDAS-------------------F 100
SS+ G +D F V++ DG+ + + ++ IQQ L + F
Sbjct: 752 SSNSGHTIDTFFVLNEDGEPLGNNPTLLKKIQQTLIDELGLVDNYRDVIGRRTPRRLKYF 811
Query: 101 APSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVV 160
A R+S+ + +E DRPGL + + + D ++NA+I T +R +
Sbjct: 812 ASPTRTSLNTDMIRNCSVLEVISPDRPGLLACIGRIFMDFDIQLLNAKIATLGERVEDIF 871
Query: 161 HVTDHSTGYAIKDP 174
+ D S G + DP
Sbjct: 872 FIVD-SQGKPLGDP 884
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 46/82 (56%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
+P R ++ + + +V++V S ++ G+L + ++ D ++ + A I++ G D+F
Sbjct: 813 SPTRTSLNTDMIRNCSVLEVISPDRPGLLACIGRIFMDFDIQLLNAKIATLGERVEDIFF 872
Query: 73 VIDCDGKKIRDKEVIDYIQQRL 94
++D GK + D + + +QQ +
Sbjct: 873 IVDSQGKPLGDPVLCEKLQQEI 894
>gi|410943919|ref|ZP_11375660.1| PII uridylyl-transferase [Gluconobacter frateurii NBRC 101659]
Length = 948
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 10 RRMN----PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
RRM PPRVV+DN TVI+++ ++ G+L + + L+ +L I A+I++ G
Sbjct: 842 RRMRAIHVPPRVVMDNTASDRHTVIEINGRDRPGLLHDITRTLSQQSLQISSAHITTYGM 901
Query: 66 WFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVG 109
+DVF V D G KI D + +I+ L + + P +S+
Sbjct: 902 RAVDVFYVRDLLGMKITDPARLAHIRDSLLSSLTPLPVKKSAAA 945
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 72/185 (38%), Gaps = 25/185 (13%)
Query: 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS-DGGWFMDVFNVIDCDGKKIRDKEV 86
T + V + G+ Q+ L I A I + G +D F V D DG D
Sbjct: 751 TELTVLCADHPGLFSQIAGALAVAGASIVDARIHTLSDGMALDTFWVQDADGCSFEDPHQ 810
Query: 87 IDYIQQRLETDASFAPSLRSSVG---------------VMP--------TEEHTSIEFTG 123
+ + +E S L + V P ++ HT IE G
Sbjct: 811 LGRLNHLVEQALSGRLDLEKGIAEARHRGASRRMRAIHVPPRVVMDNTASDRHTVIEING 870
Query: 124 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 183
DRPGL ++ L+ + +A I T+ RA V +V D G I DP RL+ I++
Sbjct: 871 RDRPGLLHDITRTLSQQSLQISSAHITTYGMRAVDVFYVRD-LLGMKITDPARLAHIRDS 929
Query: 184 LFNVL 188
L + L
Sbjct: 930 LLSSL 934
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 44/104 (42%)
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+P T + D PGLFS++ LA ++V+A I T +D A + G +
Sbjct: 745 IPDRGVTELTVLCADHPGLFSQIAGALAVAGASIVDARIHTLSDGMALDTFWVQDADGCS 804
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH 214
+DP +L + L+ L G D K G R R +H
Sbjct: 805 FEDPHQLGRLNHLVEQALSGRLDLEKGIAEARHRGASRRMRAIH 848
>gi|359787446|ref|ZP_09290493.1| PII uridylyl-transferase [Halomonas sp. GFAJ-1]
gi|359295263|gb|EHK59538.1| PII uridylyl-transferase [Halomonas sp. GFAJ-1]
Length = 891
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 69/162 (42%), Gaps = 21/162 (12%)
Query: 47 VLNDVNLVIKKAYI-SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL--ETD------ 97
+ + L I A I +S W ++ F V+D G+ IRD E I+ ++Q L E D
Sbjct: 729 AMEQLGLSIHDARIATSHNNWTLNTFIVLDNVGQPIRDLERIEEMRQHLVEELDDPDDYP 788
Query: 98 -----------ASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVN 146
F + P E T +E T DRPGL + V + + +
Sbjct: 789 DIVSRHTPRQLKHFKVPTEVLIEQDPANERTLLELTAPDRPGLLARVGRIFMEQDIALSA 848
Query: 147 AEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
A+I T +R V +T+ G + DP+R ++E L VL
Sbjct: 849 AKIATLGERVEDVFFITN-KAGEPLTDPERQQQLRERLIEVL 889
>gi|337264724|ref|YP_004608779.1| UTP-GlnB uridylyltransferase, GlnD [Mesorhizobium opportunistum
WSM2075]
gi|336025034|gb|AEH84685.1| UTP-GlnB uridylyltransferase, GlnD [Mesorhizobium opportunistum
WSM2075]
Length = 933
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
IE G DRPGL SE+ L+DL ++ +A I T ++ +VTD TG I P R++
Sbjct: 849 IEVEGLDRPGLLSEITRTLSDLSLDIASAHITTFGEKVIDTFYVTD-LTGQKIDSPARIA 907
Query: 179 TIKELLFNVLRG 190
TI+ L L G
Sbjct: 908 TIRNRLIATLEG 919
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPR I N +VI+V+ +++ G+L ++ + L+D++L I A+I++ G +D F V
Sbjct: 833 PPRAEIRNALSNRFSVIEVEGLDRPGLLSEITRTLSDLSLDIASAHITTFGEKVIDTFYV 892
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G+KI I I+ RL
Sbjct: 893 TDLTGQKIDSPARIATIRNRL 913
>gi|407777256|ref|ZP_11124526.1| PII uridylyl-transferase [Nitratireductor pacificus pht-3B]
gi|407300956|gb|EKF20078.1| PII uridylyl-transferase [Nitratireductor pacificus pht-3B]
Length = 934
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 105 RSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
R +G + + +E G DRPGL SE+ L+DL ++ +A I T ++ +VTD
Sbjct: 833 RVEIGNTLSNRFSVVEVRGLDRPGLLSELTETLSDLSLDIASAHITTFGEKVIDTFYVTD 892
Query: 165 HSTGYAIKDPKRLSTIKELLFNVLR-GYDDFRKAKT 199
TG I P RL TI++ L L G + K KT
Sbjct: 893 -LTGQKIVSPDRLETIRKTLLQTLESGVERPAKGKT 927
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I N +V++V +++ G+L ++ + L+D++L I A+I++ G +D F V
Sbjct: 832 PRVEIGNTLSNRFSVVEVRGLDRPGLLSELTETLSDLSLDIASAHITTFGEKVIDTFYVT 891
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G+KI + ++ I++ L
Sbjct: 892 DLTGQKIVSPDRLETIRKTL 911
>gi|421595977|ref|ZP_16039900.1| PII uridylyl-transferase, partial [Bradyrhizobium sp. CCGE-LA001]
gi|404271916|gb|EJZ35673.1| PII uridylyl-transferase, partial [Bradyrhizobium sp. CCGE-LA001]
Length = 534
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL E+ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 450 SDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIN 508
Query: 173 DPKRLSTIKELLFNVLRG 190
P R + IK L +V+ G
Sbjct: 509 APTRQAAIKSALTHVMAG 526
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 441 PEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 500
Query: 75 DCDGKKI 81
D G +I
Sbjct: 501 DLLGAQI 507
>gi|350532167|ref|ZP_08911108.1| PII uridylyl-transferase [Vibrio rotiferianus DAT722]
Length = 874
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 77/172 (44%), Gaps = 18/172 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V+I T + V S ++ + V+ L+ N + A I +S G+ +D F V
Sbjct: 679 PLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAPS------LRSSVGVMPTE--EH 116
+D GK I R V +I LE P+ +++ V +PT+ +
Sbjct: 739 LDQHGKAIEEGRHSAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKVDFLPTKSKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +EF D PGL ++V ADL N+ A+I T +RA + +T + G
Sbjct: 799 TLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSETGG 850
>gi|297810567|ref|XP_002873167.1| ACT domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297319004|gb|EFH49426.1| ACT domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 301
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 98/213 (46%), Gaps = 35/213 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID + +AT++++ N+ G L+ ++ L D+ L + K +S++G F++
Sbjct: 95 PMVMIDQDADPEATIVQLSFGNRLGALIDTMRSLKDLGLDVIKGTVSTEGDVKQTKFSIT 154
Query: 75 DCD-GKKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEEHTSIEFT---- 122
D G+K+ D ++++ I+ + + S ++ + G+ E ++
Sbjct: 155 KRDTGRKVEDPDLLEQIRLTIINNLLKYHPECSEQLAMGETFGIKAPENKIDVDIATHIL 214
Query: 123 --------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
DRPGL E+ V+AD++ +V +AEI T A HV+ G
Sbjct: 215 VKEDGPKRSLLVIETADRPGLVVEMIKVMADINIDVESAEIDTEGLVAKDKFHVSYQ--G 272
Query: 169 YAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
A+ ++ ++L N LR + R+ +T +
Sbjct: 273 QALN-----RSLSQVLVNCLRYF--LRRPETDI 298
>gi|58040302|ref|YP_192266.1| PII uridylyl-transferase [Gluconobacter oxydans 621H]
gi|81170616|sp|Q5FPT6.1|GLND_GLUOX RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|58002716|gb|AAW61610.1| [Protein-PII] uridylyltransferase [Gluconobacter oxydans 621H]
Length = 949
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Query: 2 DDEYAKLIRRMN----PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKK 57
D + RRM PPRVVIDN TVI+V+ ++ G+L V L+ +L I
Sbjct: 839 DASHHSTSRRMRAIHVPPRVVIDNTASDRHTVIEVNGRDRPGLLHDVTSALSSASLQISS 898
Query: 58 AYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAP 102
A+I++ G +DVF V D G KI D + +++ L + AP
Sbjct: 899 AHITTYGMRAVDVFYVRDLLGMKITDPVRLARLRETLLASLTSAP 943
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ HT IE G DRPGL +V + L+ + +A I T+ RA V +V D G I
Sbjct: 865 SDRHTVIEVNGRDRPGLLHDVTSALSSASLQISSAHITTYGMRAVDVFYVRD-LLGMKIT 923
Query: 173 DPKRLSTIKELLFNVL 188
DP RL+ ++E L L
Sbjct: 924 DPVRLARLRETLLASL 939
Score = 44.3 bits (103), Expect = 0.052, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 53/124 (42%), Gaps = 5/124 (4%)
Query: 107 SVGVMPTEEHTSIEFT--GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+V P E E T D PGLFS++ LA ++V+A I T +D A
Sbjct: 744 TVEAYPIPERGVTELTVLCADHPGLFSQIAGALAVSGASIVDARIHTLSDGMALDTFWVQ 803
Query: 165 HSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDR 221
G + ++P +L + L+ L G D RK S R R +H +++ D+
Sbjct: 804 DGEGCSFEEPHQLGRLNHLVEQALSGRLDIRKGIEDASHHSTSRRMRAIHVPPRVVIDNT 863
Query: 222 DYER 225
+R
Sbjct: 864 ASDR 867
>gi|456358634|dbj|BAM93079.1| Uridylyl-removing enzyme [Agromonas oligotrophica S58]
Length = 931
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+E +T IE +G DRPGL E+ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 846 SELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIN 904
Query: 173 DPKRLSTIKELLFNVL 188
P R + IK L ++L
Sbjct: 905 APTRQAAIKSALLHLL 920
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 837 PEVTINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 75 DCDGKKI 81
D G +I
Sbjct: 897 DLLGAQI 903
>gi|260767827|ref|ZP_05876762.1| [Protein-PII] uridylyltransferase [Vibrio furnissii CIP 102972]
gi|260617336|gb|EEX42520.1| [Protein-PII] uridylyltransferase [Vibrio furnissii CIP 102972]
Length = 874
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 20/169 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L+R +P P V++ T I V + ++ + V+ L+ NL + A I +S
Sbjct: 670 LLRHEDPTQPLVMVSKKATRGGTEIFVYTKDQPALFATVVAELDRRNLNVHDAQIMTSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDASFAPSLR------------SSVG 109
G+ +D F V+D +G+ I R K + ++ LE R + V
Sbjct: 730 GYVLDTFMVLDQNGQAIEESRHKALSKHLVHVLEDGRPTKIKTRRIPRNLQHFKVKTQVD 789
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+PT+ + T +EF D PGL + V A A+LH ++ A+I T +RA
Sbjct: 790 FLPTKSKKRTLMEFVALDTPGLLATVGATFAELHLDLHAAKITTIGERA 838
>gi|414341139|ref|YP_006982660.1| PII uridylyl-transferase [Gluconobacter oxydans H24]
gi|411026474|gb|AFV99728.1| PII uridylyl-transferase [Gluconobacter oxydans H24]
gi|453330895|dbj|GAC87222.1| PII uridylyl-transferase [Gluconobacter thailandicus NBRC 3255]
Length = 948
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Query: 10 RRMN----PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
RRM PPRVVIDN TVI+++ ++ G+L + + L+ +L I A+I++ G
Sbjct: 842 RRMRAIHVPPRVVIDNAASDRHTVIEINGRDRSGLLHDITRTLSQQSLQISSAHITTYGM 901
Query: 66 WFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
+DVF V D G KI D + +I+ L
Sbjct: 902 RAVDVFYVRDLLGMKITDAARLAHIRASL 930
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 45/104 (43%)
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+P T + D PGLFS++ LA ++V+A I T +D A + G +
Sbjct: 745 IPDRGVTELTVLCADHPGLFSQIAGALAVAGASIVDARIHTLSDGMALDTFWVQDADGCS 804
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH 214
+DP +L + L+ L G D K + G R R +H
Sbjct: 805 FEDPHQLGRLNHLVEQALSGRLDLEKGISEARHRGASRRMRAIH 848
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 69/185 (37%), Gaps = 25/185 (13%)
Query: 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS-DGGWFMDVFNVIDCDGKKIRDKEV 86
T + V + G+ Q+ L I A I + G +D F V D DG D
Sbjct: 751 TELTVLCADHPGLFSQIAGALAVAGASIVDARIHTLSDGMALDTFWVQDADGCSFEDPHQ 810
Query: 87 IDYIQQRLETDASFAPSLRSSVG---------------VMP--------TEEHTSIEFTG 123
+ + +E S L + V P ++ HT IE G
Sbjct: 811 LGRLNHLVEQALSGRLDLEKGISEARHRGASRRMRAIHVPPRVVIDNAASDRHTVIEING 870
Query: 124 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 183
DR GL ++ L+ + +A I T+ RA V +V D G I D RL+ I+
Sbjct: 871 RDRSGLLHDITRTLSQQSLQISSAHITTYGMRAVDVFYVRD-LLGMKITDAARLAHIRAS 929
Query: 184 LFNVL 188
L + L
Sbjct: 930 LLDTL 934
>gi|365895650|ref|ZP_09433753.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
STM 3843]
gi|365423576|emb|CCE06295.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
STM 3843]
Length = 930
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+E +T IE +G DRPGL E+ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 845 SELYTVIEVSGLDRPGLLYELTTAISKLNLNITSAHVATFGERARDVFYVTD-LLGAQIS 903
Query: 173 DPKRLSTIKELLFNVL 188
P R + IK L ++L
Sbjct: 904 APTRQAAIKSTLLHLL 919
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L ++ ++ +NL I A++++ G DVF V
Sbjct: 836 PEVTINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNITSAHVATFGERARDVFYVT 895
Query: 75 DCDGKKI 81
D G +I
Sbjct: 896 DLLGAQI 902
>gi|375130169|ref|YP_004992269.1| protein-P-II uridylyltransferase [Vibrio furnissii NCTC 11218]
gi|315179343|gb|ADT86257.1| protein-P-II uridylyltransferase [Vibrio furnissii NCTC 11218]
Length = 874
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 20/169 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L+R +P P V++ T I V + ++ + V+ L+ NL + A I +S
Sbjct: 670 LLRHEDPTQPLVMVSKKATRGGTEIFVYTKDQPALFATVVAELDRRNLNVHDAQIMTSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDASFAPSLR------------SSVG 109
G+ +D F V+D +G+ I R K + ++ LE R + V
Sbjct: 730 GYVLDTFMVLDQNGQAIEESRHKALSKHLVHVLEDGRPTKIKTRRIPRNLQHFKVKTQVD 789
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+PT+ + T +EF D PGL + V A A+LH ++ A+I T +RA
Sbjct: 790 FLPTKSKKRTLMEFVALDTPGLLATVGATFAELHLDLHAAKITTIGERA 838
>gi|156975508|ref|YP_001446415.1| PII uridylyl-transferase [Vibrio harveyi ATCC BAA-1116]
gi|166232255|sp|A7N1X9.1|GLND_VIBHB RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|156527102|gb|ABU72188.1| hypothetical protein VIBHAR_03239 [Vibrio harveyi ATCC BAA-1116]
Length = 874
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 18/174 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V+I T + V S ++ + V+ L+ N + A I +S G+ +D F
Sbjct: 677 SKPLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKDGYVLDTF 736
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAPS------LRSSVGVMPTE-- 114
V+D GK I R V +I LE P+ +++ V +PT+
Sbjct: 737 MVLDQHGKAIEEGRHSAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKVDFLPTKSK 796
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ T +EF D PGL ++V ADL N+ A+I T +RA + +T + G
Sbjct: 797 KRTLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAGG 850
>gi|444424960|ref|ZP_21220409.1| PII uridylyl-transferase [Vibrio campbellii CAIM 519 = NBRC 15631]
gi|444241745|gb|ELU53265.1| PII uridylyl-transferase [Vibrio campbellii CAIM 519 = NBRC 15631]
Length = 874
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 18/174 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V+I T + V S ++ + V+ L+ N + A I +S G+ +D F
Sbjct: 677 SKPLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKDGYVLDTF 736
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAPS------LRSSVGVMPTE-- 114
V+D GK I R V +I LE P+ +++ V +PT+
Sbjct: 737 MVLDQHGKAIEEGRHSAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKVDFLPTKSK 796
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ T +EF D PGL ++V ADL N+ A+I T +RA + +T + G
Sbjct: 797 KRTLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAGG 850
>gi|209965870|ref|YP_002298785.1| PII uridylyl-transferase [Rhodospirillum centenum SW]
gi|209959336|gb|ACI99972.1| protein-P-II uridylyltransferase [Rhodospirillum centenum SW]
Length = 950
Score = 54.3 bits (129), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV++DN TV++V+ ++ G+L V + L +NL I A +++ G +DVF V
Sbjct: 848 PPRVLVDNTASTAHTVVEVNGPDRPGLLYAVTRALTRLNLQIASAKVATYGNMAVDVFYV 907
Query: 74 IDCDGKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVG 109
D G K+ + + I+Q L +TDA A R G
Sbjct: 908 KDVFGLKVTHEAKLTQIRQALLDALADPDTDARTAKPPRRKAG 950
Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
HT +E G DRPGL V L L+ + +A++ T+ + A V +V D G +
Sbjct: 861 HTVVEVNGPDRPGLLYAVTRALTRLNLQIASAKVATYGNMAVDVFYVKD-VFGLKVTHEA 919
Query: 176 RLSTIKELLFNVLRGYD-DFRKAKTSLSPP 204
+L+ I++ L + L D D R AK PP
Sbjct: 920 KLTQIRQALLDALADPDTDARTAK----PP 945
>gi|388602519|ref|ZP_10160915.1| PII uridylyl-transferase [Vibrio campbellii DS40M4]
Length = 874
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 18/174 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V+I T + V S ++ + V+ L+ N + A I +S G+ +D F
Sbjct: 677 SKPLVLISKKATRGGTEVFVYSPDQPALFATVVAELDRRNFNVHDAQIMTSKDGYVLDTF 736
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAPS------LRSSVGVMPTE-- 114
V+D GK I R V +I LE P+ +++ V +PT+
Sbjct: 737 MVLDQHGKAIEEGRHSAVTKHITHVLEDGRPTKIKTRRTPNKLQHFNVKTKVDFLPTKSK 796
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ T +EF D PGL ++V ADL N+ A+I T +RA + +T + G
Sbjct: 797 KRTLMEFVALDTPGLLAKVGRTFADLGINLHAAKITTIGERAEDLFILTSEAGG 850
>gi|328545863|ref|YP_004305972.1| UTP-GlnB uridylyltransferase, GlnD [Polymorphum gilvum SL003B-26A1]
gi|326415603|gb|ADZ72666.1| UTP-GlnB uridylyltransferase, GlnD [Polymorphum gilvum SL003B-26A1]
Length = 942
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
Query: 11 RMNPPRV---VIDNNTCADA-TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGW 66
RM RV VI NN+ +D TVI+V +++ G+L + + + +NL I A+IS+ G
Sbjct: 834 RMKAFRVASDVIVNNSWSDGYTVIEVTGLDRPGLLYDLTRAIATLNLNIGSAHISTFGER 893
Query: 67 FMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPT 113
+DVF V D G+KI + D I++RL P S VM T
Sbjct: 894 VVDVFYVTDLTGQKIANVGRQDVIRERLRDAVEGRPEAGSGALVMQT 940
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE TG DRPGL ++ +A L+ N+ +A I T +R V +VTD TG I
Sbjct: 851 SDGYTVIEVTGLDRPGLLYDLTRAIATLNLNIGSAHISTFGERVVDVFYVTD-LTGQKIA 909
Query: 173 DPKRLSTIKELLFNVLRG 190
+ R I+E L + + G
Sbjct: 910 NVGRQDVIRERLRDAVEG 927
>gi|262166338|ref|ZP_06034075.1| [Protein-PII] uridylyltransferase [Vibrio mimicus VM223]
gi|262026054|gb|EEY44722.1| [Protein-PII] uridylyltransferase [Vibrio mimicus VM223]
Length = 622
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 93/193 (48%), Gaps = 19/193 (9%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ T + V + ++ + V+ L+ NL + A I +S G+ +D F V
Sbjct: 425 PLVLLSKKATRGGTEVFVYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 484
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE--EH 116
+D +G+ I R + +I ++ LE A P +++ V +PT+ +
Sbjct: 485 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLHHFKVKTQVDFLPTKSKKR 544
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+ S G + + +
Sbjct: 545 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN-SQGARLNEEEE 603
Query: 177 LSTIKELLFNVLR 189
++L+ NV R
Sbjct: 604 QLLREKLIENVAR 616
>gi|163797114|ref|ZP_02191069.1| UTP:GlnB (protein PII) uridylyltransferase [alpha proteobacterium
BAL199]
gi|159177630|gb|EDP62183.1| UTP:GlnB (protein PII) uridylyltransferase [alpha proteobacterium
BAL199]
Length = 945
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV+IDN TV++V+ ++ G+L ++ + L V + I A IS+ G F+DVF +
Sbjct: 852 PPRVLIDNKASVTHTVVEVNGRDEPGVLWRMTRALAGVGVQIHSASISTYGERFVDVFYL 911
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ K ++ I++ L
Sbjct: 912 KDVFGLKVDSKSKLEDIRRAL 932
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T + TD PGLFS + +A NVV+A I+T ++ A + A P R
Sbjct: 754 TEVTVYATDHPGLFSRISGAMAATGANVVDARIFTLSNGMALDTFLIQDEDRLAFDRPDR 813
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSP 203
++ + + L G KA + P
Sbjct: 814 IAKLVSAIERALSGALRVDKALEARKP 840
>gi|357145299|ref|XP_003573594.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Brachypodium distachyon]
Length = 281
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 91/205 (44%), Gaps = 37/205 (18%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V+ID ++ DAT+++V ++ G LL + L ++ L + KA + D + F +
Sbjct: 75 PKVIIDQDSDPDATIVEVTLGDRLGDLLDTMSALRNLGLNVVKASVCLDSSGKHNKFAIT 134
Query: 75 DCD-GKKIRDKEVIDYIQQRL---------ETDASFAPSLRSSVGVMPTEEHTSIEFT-- 122
G+KI D E+++ ++ + ET + A + ++ G+ P E ++
Sbjct: 135 KSSTGRKIDDPELLEAVRLTIINNMLEYHPETSSQLA--MGATFGIEPPTEVVDVDIATH 192
Query: 123 ----------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
DRPGL ++ ++AD++ V + E T A A HV+
Sbjct: 193 IDIYDDGPERSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS--- 249
Query: 167 TGYAIKDPKRLSTIKELLFNVLRGY 191
+ + ++++L N LR +
Sbjct: 250 ----YRGKPLIKALQQVLANSLRYF 270
>gi|27365205|ref|NP_760733.1| PII uridylyl-transferase [Vibrio vulnificus CMCP6]
gi|30173035|sp|Q8DBG3.1|GLND_VIBVU RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|27361352|gb|AAO10260.1| protein-P-II uridylyltransferase [Vibrio vulnificus CMCP6]
Length = 873
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 21/200 (10%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
++R NP P V++ T + V + ++H + V+ L+ N + A I SS
Sbjct: 670 ILRMDNPEQPLVLMSKKATRGGTEVFVYTKDQHALFATVVAELDRRNFNVHDAQIMSSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRL------ETDASFAP------SLRSSVG 109
G+ +D F V+D G+ I K VI ++ L + P +++ V
Sbjct: 730 GYVLDTFMVLDQHGQAIDVDNHKAVIKHLMHVLADGRPTKVKTRRTPYKLQHFKVKTKVD 789
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ + T +E D PGL + A AD+ N+ A+I T +RA + +T +
Sbjct: 790 FLPTKSKKRTLMELVALDTPGLLAITGATFADMGFNLHGAKITTIGERAEDLFILTSENG 849
Query: 168 GYAIKDPKRLSTIKELLFNV 187
G + + + L ++L+ N+
Sbjct: 850 G-RLSEEQELQLREKLIHNI 868
>gi|388258218|ref|ZP_10135396.1| PII uridylyl-transferase [Cellvibrio sp. BR]
gi|387938339|gb|EIK44892.1| PII uridylyl-transferase [Cellvibrio sp. BR]
Length = 928
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 24/175 (13%)
Query: 15 PRVVIDNNTC---ADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
P ++I T A AT I V S N+ + + L+ +NL I+ A I SS G+ +D
Sbjct: 725 PLILIKKTTSKELAGATQIFVYSKNQKNVFVAAATALSLLNLSIQDAKIYSSKSGYTIDT 784
Query: 71 FNVIDCDGKKI-RDKEVIDYIQQRLETDASFAPSLRSSVG----------VMPTEEHTS- 118
F V++ +G+ + ++ ++ IQQ L + S + R +G PT S
Sbjct: 785 FFVLNENGEPLGNNQTLLKKIQQGLMEELSLVDNYRDVIGRRTPRRLKYFASPTRTSLST 844
Query: 119 --------IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 165
+E DRPGL + + + D ++NA+I T +R + + D+
Sbjct: 845 DTIRNCSVLEVISPDRPGLLACIGRIFMDYDIQLLNAKIATLGERVEDIFFIADN 899
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 46/82 (56%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
+P R + +T + +V++V S ++ G+L + ++ D ++ + A I++ G D+F
Sbjct: 836 SPTRTSLSTDTIRNCSVLEVISPDRPGLLACIGRIFMDYDIQLLNAKIATLGERVEDIFF 895
Query: 73 VIDCDGKKIRDKEVIDYIQQRL 94
+ D DGK + D + + +QQ +
Sbjct: 896 IADNDGKPLGDVALCEKLQQEI 917
>gi|326503086|dbj|BAJ99168.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326505920|dbj|BAJ91199.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 278
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 92/203 (45%), Gaps = 33/203 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V+ID ++ DAT+++V ++ G LL + L ++ L + KA + D + F +
Sbjct: 72 PKVIIDQDSDPDATIVEVTLGDRLGDLLDTMSALRNLGLNVVKASVCLDSSGKHNKFAIT 131
Query: 75 DCD-GKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMPTEE------HTSIE 120
G+KI D E+++ ++ + +AS ++ ++ G+ P E T IE
Sbjct: 132 KSSTGRKIDDPELLEAVRLTIINNMLEYHPEASSQLAMGATFGLEPPTEVVDVDIATHIE 191
Query: 121 F------------TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
DRPGL ++ ++AD++ V + E T A A HV+
Sbjct: 192 IYDDGPERSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS----- 246
Query: 169 YAIKDPKRLSTIKELLFNVLRGY 191
+ + ++++L N LR +
Sbjct: 247 --YRGKPLIKALQQVLANSLRYF 267
>gi|215687047|dbj|BAG90893.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 271
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 86/188 (45%), Gaps = 21/188 (11%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDVFNVI 74
V +DN+ T+I++ + G++ +++ L D N+ I + Y S +G +D+F V
Sbjct: 90 VAMDNSLSPAHTLIQIQCGDHKGLVYDIMRTLKDCNIQISYGRFYASQNGSCEVDLFAV- 148
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFS 131
DGKKI D+ + RL T+ P + V P E +E +G RP +F
Sbjct: 149 QSDGKKIVDQHKQRALCCRLRTEL-HRPLRVALVNRGPDTELLVANPVEVSGKGRPLVFY 207
Query: 132 EVCAVLADLHCNVVNAEIWTH--NDRAAAVVHV----TDHSTGYAIKDPKRLSTIKELLF 185
++ L LH + AEI H DR V V DHS+ S I + +
Sbjct: 208 DITLALKKLHKRIFLAEIGRHVVGDREWEVYRVHLGEGDHSS--------LRSKIVDGVT 259
Query: 186 NVLRGYDD 193
N+L G+DD
Sbjct: 260 NMLMGWDD 267
>gi|372268622|ref|ZP_09504670.1| PII uridylyl-transferase [Alteromonas sp. S89]
Length = 911
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 84/177 (47%), Gaps = 22/177 (12%)
Query: 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVIDCDGKKIRDK- 84
AT + V + ++ + V+ L+ +NL I A + SS G+ +D F V+D G+ + D+
Sbjct: 719 ATEVFVYTPDRPNVFAAVVTGLDMLNLNIHDARLYSSAAGYTLDTFYVLDESGQPLLDEP 778
Query: 85 ----EVIDYIQQRLETDASFAPSLR---------------SSVGVMPTEEHTSIEFTGTD 125
++ + +Q+ L+ ++ ++ + + P + ++++E T D
Sbjct: 779 HRLEQIRNTLQEELKLVEDYSKVIKRRTPRRLKMFHLPSQAHISTEPGDTYSTLEITSAD 838
Query: 126 RPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
RPGL + + + + NA+I T +R + H+TD S + D + T+++
Sbjct: 839 RPGLLARIARIFISHDLRLHNAKISTLGERVEDIFHITD-SEDQPLADNALIETLQQ 894
>gi|320155590|ref|YP_004187969.1| (Protein-PII) uridylyltransferase [Vibrio vulnificus MO6-24/O]
gi|319930902|gb|ADV85766.1| [Protein-PII] uridylyltransferase [Vibrio vulnificus MO6-24/O]
Length = 873
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 21/200 (10%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
++R NP P V++ T + V + ++H + V+ L+ N + A I SS
Sbjct: 670 ILRMDNPEQPLVLMSKKATRGGTEVFVYTKDQHALFATVVAELDRRNFNVHDAQIMSSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRL------ETDASFAP------SLRSSVG 109
G+ +D F V+D G+ I K VI ++ L + P +++ V
Sbjct: 730 GYVLDTFMVLDQHGQAIDVDNHKAVIKHLMHVLTDGRPTKVKTRRTPYKLQHFKVKTKVD 789
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ + T +E D PGL + A AD+ N+ A+I T +RA + +T +
Sbjct: 790 FLPTKSKKRTLMELVALDTPGLLAITGATFADMGFNLHGAKITTIGERAEDLFILTSENG 849
Query: 168 GYAIKDPKRLSTIKELLFNV 187
G + + + L ++L+ N+
Sbjct: 850 G-RLSEEQELQLREKLIHNI 868
>gi|115480793|ref|NP_001063990.1| Os09g0570900 [Oryza sativa Japonica Group]
gi|52076090|dbj|BAD46603.1| unknown protein [Oryza sativa Japonica Group]
gi|113632223|dbj|BAF25904.1| Os09g0570900 [Oryza sativa Japonica Group]
gi|215700991|dbj|BAG92415.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 427
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 86/188 (45%), Gaps = 21/188 (11%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDVFNVI 74
V +DN+ T+I++ + G++ +++ L D N+ I + Y S +G +D+F V
Sbjct: 246 VAMDNSLSPAHTLIQIQCGDHKGLVYDIMRTLKDCNIQISYGRFYASQNGSCEVDLFAV- 304
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFS 131
DGKKI D+ + RL T+ P + V P E +E +G RP +F
Sbjct: 305 QSDGKKIVDQHKQRALCCRLRTEL-HRPLRVALVNRGPDTELLVANPVEVSGKGRPLVFY 363
Query: 132 EVCAVLADLHCNVVNAEIWTH--NDRAAAVVHV----TDHSTGYAIKDPKRLSTIKELLF 185
++ L LH + AEI H DR V V DHS+ S I + +
Sbjct: 364 DITLALKKLHKRIFLAEIGRHVVGDREWEVYRVHLGEGDHSS--------LRSKIVDGVT 415
Query: 186 NVLRGYDD 193
N+L G+DD
Sbjct: 416 NMLMGWDD 423
>gi|37680743|ref|NP_935352.1| PII uridylyl-transferase [Vibrio vulnificus YJ016]
gi|62288143|sp|Q7MIF8.1|GLND_VIBVY RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|37199492|dbj|BAC95323.1| protein-P-II uridylyltransferase [Vibrio vulnificus YJ016]
Length = 873
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 21/200 (10%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
++R NP P V++ T + V + ++H + V+ L+ N + A I SS
Sbjct: 670 ILRMDNPEQPLVLMSKKATRGGTEVFVYTKDQHALFATVVAELDRRNFNVHDAQIMSSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRL------ETDASFAP------SLRSSVG 109
G+ +D F V+D G+ I K VI ++ L + P +++ V
Sbjct: 730 GYVLDTFMVLDQHGQAIDVDNHKAVIKHLMHVLTDGRPTKVKTRRTPYKLQHFKVKTKVD 789
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ + T +E D PGL + A AD+ N+ A+I T +RA + +T +
Sbjct: 790 FLPTKSKKRTLMELVALDTPGLLAITGATFADMGFNLHGAKITTIGERAEDLFILTSENG 849
Query: 168 GYAIKDPKRLSTIKELLFNV 187
G + + + L ++L+ N+
Sbjct: 850 G-RLSEEQELQLREKLIHNI 868
>gi|407768112|ref|ZP_11115491.1| PII uridylyl-transferase [Thalassospira xiamenensis M-5 = DSM
17429]
gi|407288825|gb|EKF14302.1| PII uridylyl-transferase [Thalassospira xiamenensis M-5 = DSM
17429]
Length = 917
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 80/191 (41%), Gaps = 27/191 (14%)
Query: 23 TCADATVIKVDSVNKHGILLQVI--QVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKK 80
T DAT I V + + G+ Q+ L N+V K +DG +D F + D +G+
Sbjct: 726 TDIDATEIIVHTTDHPGLFSQIAGSMALCGANVVDAKILTLADG-MALDTFFIQDTNGEA 784
Query: 81 IRDKEVIDYIQQRLET--DASFAPSL------------RSSV-GVMP--------TEEHT 117
DK +D +++ LE PS R++V V P + HT
Sbjct: 785 FNDKSKLDKLRKTLEQVISGRLRPSQEIERRQIKDNKHRTAVFKVEPNVIIDNKASRTHT 844
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
IE T DR GL +V L DL + +A I T +RA V +V D G I +
Sbjct: 845 VIEITARDRQGLLYDVTRTLRDLSLQIASARISTFGERAVDVFYVKD-VFGLKIDSRTKF 903
Query: 178 STIKELLFNVL 188
+KE L L
Sbjct: 904 LQVKETLTQTL 914
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+IDN TVI++ + ++ G+L V + L D++L I A IS+ G +DVF V
Sbjct: 831 PNVIIDNKASRTHTVIEITARDRQGLLYDVTRTLRDLSLQIASARISTFGERAVDVFYVK 890
Query: 75 DCDGKKIRDK----EVIDYIQQRLE 95
D G KI + +V + + Q LE
Sbjct: 891 DVFGLKIDSRTKFLQVKETLTQTLE 915
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T I TD PGLFS++ +A NVV+A+I T D A + G A D +
Sbjct: 731 TEIIVHTTDHPGLFSQIAGSMALCGANVVDAKILTLADGMALDTFFIQDTNGEAFNDKSK 790
Query: 177 LSTIKELLFNVLRG 190
L +++ L V+ G
Sbjct: 791 LDKLRKTLEQVISG 804
>gi|75674332|ref|YP_316753.1| PII uridylyl-transferase [Nitrobacter winogradskyi Nb-255]
gi|91206747|sp|Q3SWE0.1|GLND_NITWN RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|74419202|gb|ABA03401.1| Protein-P-II uridylyltransferase [Nitrobacter winogradskyi Nb-255]
Length = 925
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ HT IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 844 SDRHTMIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGARIT 902
Query: 173 DPKRLSTIKELLFNVL 188
P R + IK L ++L
Sbjct: 903 APTRQAAIKRALVHLL 918
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 10 RRMNP----PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
+R+ P P+V I+N T+I+V +++ G+L Q+ ++ +NL I A++++ G
Sbjct: 826 KRLRPFVVEPKVTINNQWSDRHTMIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGE 885
Query: 66 WFMDVFNVIDCDGKKI 81
DVF V D G +I
Sbjct: 886 RARDVFYVTDLLGARI 901
>gi|224110036|ref|XP_002315393.1| predicted protein [Populus trichocarpa]
gi|222864433|gb|EEF01564.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 36/204 (17%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V+ID + DATV++V ++ G LL + L ++ L + KA + D + F++
Sbjct: 74 PKVIIDQDADPDATVVEVTFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNTFSIT 133
Query: 75 DCD-GKKIRDKEVIDYI---------QQRLETDASFAPSLRSSVGVMPTEE--------- 115
G+K+ D E+++ I Q E+ + A + + GV P ++
Sbjct: 134 KASTGRKVDDPELLEAIRLTIINNLLQYHPESSSQLAMGI--AFGVEPPKQVDVDIATRV 191
Query: 116 -------HTSIEFT-GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
S+ F DRPGL ++ + D++ V + E T A A HV+
Sbjct: 192 KVKEDSPDRSLLFVEAADRPGLLVDLVKAITDINIAVESGEFDTEGLLAKAKFHVS--YK 249
Query: 168 GYAIKDPKRLSTIKELLFNVLRGY 191
G AI P +L +L N LR +
Sbjct: 250 GKAISKPLQL-----VLANSLRYF 268
>gi|359394094|ref|ZP_09187147.1| uridylyltransferase [Halomonas boliviensis LC1]
gi|357971341|gb|EHJ93786.1| uridylyltransferase [Halomonas boliviensis LC1]
Length = 891
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 21/162 (12%)
Query: 47 VLNDVNLVIKKAYI-SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL--ETD------ 97
+ + L I A I +S W ++ F V+D G+ IRD I+ ++Q L E D
Sbjct: 729 AMEQLGLSIHDARIATSHNDWTLNTFIVLDSHGQPIRDPGHIEEMRQHLVEELDDPDDYP 788
Query: 98 -----------ASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVN 146
F + P E T +E T DRPGL + V + + ++
Sbjct: 789 DIVTRHTPRQLKHFKVPTEVLIEQDPANERTLLELTAPDRPGLLARVGRIFMEQDISLSA 848
Query: 147 AEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
A+I T +R V +T G + DP+R ++E L VL
Sbjct: 849 AKIATLGERVEDVFFITT-KAGEPLTDPERQQQLRERLIEVL 889
>gi|147800453|emb|CAN70848.1| hypothetical protein VITISV_038929 [Vitis vinifera]
Length = 453
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 94/207 (45%), Gaps = 33/207 (15%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V+ID ++ +AT++++ ++ G LL + L ++ L + KA + D + F +
Sbjct: 85 PKVIIDQDSDPNATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNTFAIT 144
Query: 75 DCD-GKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMPTEE--------HTS 118
D G+K+ D E+++ I+ + ++S ++ + G+ P ++ H S
Sbjct: 145 KADTGRKVEDPELLEAIRLTIINNMLQYHPESSEQLAMGVAFGITPPKQQVDVDIATHIS 204
Query: 119 IEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ G DRPGL ++ + D++ +V + E T A A HV+ G
Sbjct: 205 VNDDGPDRSLLYVETADRPGLLVDLVKSITDINIDVESGEFDTEGLLAKAKFHVS--YRG 262
Query: 169 YAIKDP--KRLSTIKELLFNVLRGYDD 193
AI P + +T K L G DD
Sbjct: 263 KAIIKPLQQNFNTTK---LGRLAGGDD 286
>gi|418470937|ref|ZP_13040863.1| protein-P-II uridylyltransferase, partial [Streptomyces
coelicoflavus ZG0656]
gi|371548442|gb|EHN76681.1| protein-P-II uridylyltransferase, partial [Streptomyces
coelicoflavus ZG0656]
Length = 146
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 49/82 (59%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V++D++ ATV++V ++ G+L + +V +D L I+ A+++S G +D F V+
Sbjct: 22 PVVMVDHHASETATVVEVSGADRPGLLAALSRVFSDEGLNIRSAHVASYGERAVDSFYVV 81
Query: 75 DCDGKKIRDKEVIDYIQQRLET 96
D G+KI ++ + ++ LE
Sbjct: 82 DRKGRKITSEQRVAELRAALEA 103
Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+E T +E +G DRPGL + + V +D N+ +A + ++ +RA +V D G I
Sbjct: 31 SETATVVEVSGADRPGLLAALSRVFSDEGLNIRSAHVASYGERAVDSFYVVDR-KGRKIT 89
Query: 173 DPKRLSTIKELLFNVL 188
+R++ ++ L VL
Sbjct: 90 SEQRVAELRAALEAVL 105
>gi|343492904|ref|ZP_08731251.1| PII uridylyl-transferase [Vibrio nigripulchritudo ATCC 27043]
gi|342826699|gb|EGU61113.1| PII uridylyl-transferase [Vibrio nigripulchritudo ATCC 27043]
Length = 873
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 17/171 (9%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ T + + S + + V L+ N I A + +S G+ +D F V
Sbjct: 679 PLVLLSKKPTRGGTEVFIYSPDLPNLFANVAGELDRRNFSIHDAQVMTSKDGYALDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLETDASFAP-----------SLRSSVGVMPTE--EHT 117
+D GK I R V+ +Q L+ +S ++++ V +PT+ + T
Sbjct: 739 LDQHGKPIEENRHATVVKQLQSVLDETSSATKVRRTPRQLMHFNVKTKVDFIPTKTKKRT 798
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+EF D PGL + V A ADL+ N+ A+I T +RA + +T + G
Sbjct: 799 LMEFVALDTPGLLANVGATFADLNINLHAAKITTIGERAEDLFILTSPNGG 849
>gi|357030935|ref|ZP_09092879.1| PII uridylyl-transferase [Gluconobacter morbifer G707]
gi|356415629|gb|EHH69272.1| PII uridylyl-transferase [Gluconobacter morbifer G707]
Length = 945
Score = 53.5 bits (127), Expect = 9e-05, Method: Composition-based stats.
Identities = 39/99 (39%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 8 LIRRMN----PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD 63
L RRM PPRVVIDN TVI+V+ ++ G+L V L+ +L I A+I++
Sbjct: 840 LSRRMRAIHVPPRVVIDNTASDRHTVIEVNGRDRPGLLHDVTSALSGQSLQISSAHITTY 899
Query: 64 GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAP 102
G +DVF V D G KI D ++ I++ L AS P
Sbjct: 900 GMRAVDVFYVRDLLGMKIVDPVRLNRIREALL--ASLTP 936
Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 14/92 (15%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ HT IE G DRPGL +V + L+ + +A I T+ RA V +V D G I
Sbjct: 860 SDRHTVIEVNGRDRPGLLHDVTSALSGQSLQISSAHITTYGMRAVDVFYVRD-LLGMKIV 918
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPP 204
DP RL+ I+E L SL+PP
Sbjct: 919 DPVRLNRIREALL-------------ASLTPP 937
Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 7/128 (5%)
Query: 105 RSSVGV----MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVV 160
RS V V +P T + D PGLFS++ LA ++V+A I T +D A
Sbjct: 735 RSPVTVEAYPIPDRGVTELTVLCADHPGLFSQIAGALAVAGASIVDARIHTLSDGMALDT 794
Query: 161 HVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIM 217
+ G + ++P +L + L+ L G D R+ S G+ R R +H +++
Sbjct: 795 FWVQDAEGCSFEEPHQLGRLNHLVEQALSGRLDIRQGIAEASHHGLSRRMRAIHVPPRVV 854
Query: 218 FDDRDYER 225
D+ +R
Sbjct: 855 IDNTASDR 862
>gi|85713993|ref|ZP_01044982.1| PII uridylyl-transferase [Nitrobacter sp. Nb-311A]
gi|85699119|gb|EAQ36987.1| PII uridylyl-transferase [Nitrobacter sp. Nb-311A]
Length = 925
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ HT IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 844 SDRHTMIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGARIT 902
Query: 173 DPKRLSTIKELLFNVL 188
P R + IK L ++L
Sbjct: 903 APTRQTAIKRALVHLL 918
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 10 RRMNP----PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
+R+ P P+V I+N T+I+V +++ G+L Q+ ++ +NL I A++++ G
Sbjct: 826 KRLRPFVVEPKVTINNQWSDRHTMIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGE 885
Query: 66 WFMDVFNVIDCDGKKI 81
DVF V D G +I
Sbjct: 886 RARDVFYVTDLLGARI 901
>gi|393765065|ref|ZP_10353658.1| PII uridylyl-transferase [Methylobacterium sp. GXF4]
gi|392729489|gb|EIZ86761.1| PII uridylyl-transferase [Methylobacterium sp. GXF4]
Length = 935
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ T +E TG DRPGL E+ L N+ +A + T +RA V +VTD TG +
Sbjct: 837 SSRETVVEVTGLDRPGLLYELTTAFGRLSLNITSAHVATFGERAVDVFYVTD-LTGTRVT 895
Query: 173 DPKRLSTIKELLFNVLRG 190
P R + I++ + +V G
Sbjct: 896 QPDRQAAIRKAMLDVFAG 913
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V IDN + TV++V +++ G+L ++ ++L I A++++ G +DVF V
Sbjct: 827 PPDVGIDNALSSRETVVEVTGLDRPGLLYELTTAFGRLSLNITSAHVATFGERAVDVFYV 886
Query: 74 IDCDGKKI 81
D G ++
Sbjct: 887 TDLTGTRV 894
>gi|90421866|ref|YP_530236.1| PII uridylyl-transferase [Rhodopseudomonas palustris BisB18]
gi|90103880|gb|ABD85917.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Rhodopseudomonas
palustris BisB18]
Length = 931
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+E +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 846 SERYTVIEVSGLDRPGLLYQLTTSISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 904
Query: 173 DPKRLSTIKELLFNVLRGYD 192
P R + IK L ++L D
Sbjct: 905 APTRQAAIKRALIHLLANGD 924
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N TVI+V +++ G+L Q+ ++ +NL I A++++ G DVF V
Sbjct: 837 PEVAINNQWSERYTVIEVSGLDRPGLLYQLTTSISKLNLNIASAHVATFGERARDVFYVT 896
Query: 75 DCDGKKI 81
D G +I
Sbjct: 897 DLLGAQI 903
>gi|402773665|ref|YP_006593202.1| UTP-GlnB uridylyltransferase, GlnD [Methylocystis sp. SC2]
gi|401775685|emb|CCJ08551.1| UTP-GlnB uridylyltransferase, GlnD [Methylocystis sp. SC2]
Length = 936
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 78 GKKIRDKEVIDYIQQRLETDA-SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAV 136
G+ + +E+ + L TDA S AP + V + +T IE +G DR GL E+
Sbjct: 812 GEVVVSEELRARAKTHLPTDAFSVAPEV--VVDNSLSNVYTVIEVSGLDREGLLFELTNA 869
Query: 137 LADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRK 196
++ L+ N+ +A I T +RA +VTD TG I P+R + IK L +V G R
Sbjct: 870 ISRLNLNIASAHIVTFGERAVDAFYVTD-LTGAKIASPQRQAAIKRQLLDVF-GGPGARG 927
Query: 197 AKT 199
AKT
Sbjct: 928 AKT 930
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P VV+DN+ TVI+V +++ G+L ++ ++ +NL I A+I + G +D F V
Sbjct: 837 PEVVVDNSLSNVYTVIEVSGLDREGLLFELTNAISRLNLNIASAHIVTFGERAVDAFYVT 896
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSS 107
D G KI + I+++L D P R +
Sbjct: 897 DLTGAKIASPQRQAAIKRQL-LDVFGGPGARGA 928
>gi|386818050|ref|ZP_10105268.1| UTP-GlnB uridylyltransferase, GlnD [Thiothrix nivea DSM 5205]
gi|386422626|gb|EIJ36461.1| UTP-GlnB uridylyltransferase, GlnD [Thiothrix nivea DSM 5205]
Length = 879
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 87/195 (44%), Gaps = 19/195 (9%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL-VIKKAYISSDGGWFMDVFN 72
P + + + V+ V S ++ + +V+ L +NL V++ +S+ G+ + +
Sbjct: 685 PTLIHLRRTVSGSSNVLFVYSKDQDDLFSRVVSTLEQLNLNVVQARIVSTTDGFDLYTLH 744
Query: 73 VIDCDGKKI---RDKE-VIDYIQQRLETDASFAPSLRS-------------SVGVMPTEE 115
++ D + I D++ +ID ++ LE D S +LR S P +
Sbjct: 745 ILGPDNQLIISDADRQYIIDTLEANLERDISRQAALRKPRILRNFDVPTRVSFNQQPDKN 804
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
T IE D PGL S + + L V NA I T ++A + +VT G I D
Sbjct: 805 LTLIEINTGDMPGLLSRLGEAMDGLGIRVHNARINTLGEQAQDIFYVTARD-GSMITDET 863
Query: 176 RLSTIKELLFNVLRG 190
+ + I+E+L L+G
Sbjct: 864 QQAHIREVLVQALKG 878
>gi|23015392|ref|ZP_00055169.1| COG2844: UTP:GlnB (protein PII) uridylyltransferase
[Magnetospirillum magnetotacticum MS-1]
Length = 924
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV++DN TV++V+ ++ G+L + + +V L I A+IS+ G +DVF V
Sbjct: 826 PPRVLVDNVPSRSHTVVEVNGRDRPGLLYDITSAMTNVGLQISSAHISTYGERVVDVFYV 885
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ ++ I+ L
Sbjct: 886 KDVFGHKVEHGRKLEQIKAAL 906
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+P+ HT +E G DRPGL ++ + + ++ + +A I T+ +R V +V D G+
Sbjct: 834 VPSRSHTVVEVNGRDRPGLLYDITSAMTNVGLQISSAHISTYGERVVDVFYVKD-VFGHK 892
Query: 171 IKDPKRLSTIKELLFNVL 188
++ ++L IK L L
Sbjct: 893 VEHGRKLEQIKAALLAAL 910
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
I +TG D PGLFS++ +A N+V+A+I T + A S G A P +L+
Sbjct: 731 IVYTG-DHPGLFSQIAGAMAVSGANIVDAKIITLANGMALDTFCIQDSDGGAFDSPAKLA 789
Query: 179 TIKELLFNVLRG 190
+ + VL G
Sbjct: 790 KLSSCVEQVLSG 801
>gi|31789388|gb|AAP58504.1| putative PII uridylyltransferase [uncultured Acidobacteria
bacterium]
Length = 938
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ +T +E TG DR GL E+ A L+ L+ N+ +A + T +R V +VTD G I
Sbjct: 852 SHRYTMVEVTGLDRAGLLYELTATLSKLNLNIASAHVATFGERVIDVFYVTD-LLGAQIT 910
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKA 197
P R + IK L + G ++ KA
Sbjct: 911 SPTRQAAIKRALIALFAGPNNESKA 935
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N T+++V +++ G+L ++ L+ +NL I A++++ G +DVF V
Sbjct: 843 PTVTINNQWSHRYTMVEVTGLDRAGLLYELTATLSKLNLNIASAHVATFGERVIDVFYVT 902
Query: 75 DCDGKKI 81
D G +I
Sbjct: 903 DLLGAQI 909
>gi|326509743|dbj|BAJ87087.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 278
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 33/203 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V+ID ++ DAT+++V ++ G LL + L ++ L + KA + D + F +
Sbjct: 72 PKVIIDQDSDPDATIVEVTLGDRLGDLLDTMSALRNLGLNVVKASVCLDSSGKHNKFAIT 131
Query: 75 DCD-GKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMPTEE------HTSIE 120
G+KI D E+++ ++ + +AS ++ ++ G+ P E T IE
Sbjct: 132 KSSTGRKIDDPELLEAVRLTIINNMLEYHPEASSQLAMGATFGLEPPTEVVDVDIATHIE 191
Query: 121 F------------TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
DRPGL + ++AD++ V + E T A A HV+
Sbjct: 192 IYDDGPERSLLVVESADRPGLLVGLVKIIADINITVQSGEFDTEGLLAKAKFHVS----- 246
Query: 169 YAIKDPKRLSTIKELLFNVLRGY 191
+ + ++++L N LR +
Sbjct: 247 --YRGKPLIKALQQVLANSLRYF 267
>gi|115522288|ref|YP_779199.1| PII uridylyl-transferase [Rhodopseudomonas palustris BisA53]
gi|115516235|gb|ABJ04219.1| UTP-GlnB uridylyltransferase, GlnD [Rhodopseudomonas palustris
BisA53]
Length = 931
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 846 SDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 904
Query: 173 DPKRLSTIKELLFNVLRGYDDFRK 196
P R + IK L ++L D +K
Sbjct: 905 APTRQAAIKRALIHLLADADAAQK 928
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N+ TVI+V +++ G+L Q+ ++ +NL I A++++ G DVF V
Sbjct: 837 PEVAINNSWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVT 896
Query: 75 DCDGKKI 81
D G +I
Sbjct: 897 DLLGAQI 903
>gi|144900389|emb|CAM77253.1| Protein-P-II uridylyltransferase [Magnetospirillum gryphiswaldense
MSR-1]
Length = 920
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV+IDN + T+I+V+ ++ G+L + + + L I A+IS+ G +DVF V
Sbjct: 824 PPRVIIDNKASSSHTLIEVNGRDRPGLLYDLTAAMTQLGLQIASAHISTYGERVVDVFYV 883
Query: 74 IDCDGKKIRDKEVIDYIQ 91
D G K++ + ++ I+
Sbjct: 884 KDIFGLKVQHERKLEQIR 901
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 88/213 (41%), Gaps = 30/213 (14%)
Query: 5 YAKLIR----RMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVL--NDVNLVIKKA 58
+A+L+R R P V ++ T I V + + G+ Q+ + + N+V K
Sbjct: 699 HARLVRDAEQRHAPLTVESRIDSFRSVTEINVYTSDHPGLFSQIAGAMAVSGANIVDAK- 757
Query: 59 YISSDGGWFMDVFNVIDCDGKKI----RDKEVIDYIQQRLETDASFAPSLRSSVGVMP-- 112
++ G +D F + + DG + ++ I+Q L L + G +P
Sbjct: 758 IVTLANGMALDSFWIQESDGAAFDTPSKLAKLSTVIEQVLSGRMRLDKELAARKGKLPAR 817
Query: 113 ----------------TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+ HT IE G DRPGL ++ A + L + +A I T+ +R
Sbjct: 818 AHVFKVPPRVIIDNKASSSHTLIEVNGRDRPGLLYDLTAAMTQLGLQIASAHISTYGERV 877
Query: 157 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLR 189
V +V D G ++ ++L I++ + LR
Sbjct: 878 VDVFYVKD-IFGLKVQHERKLEQIRDGVLKALR 909
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T I +D PGLFS++ +A N+V+A+I T + A S G A P +
Sbjct: 726 TEINVYTSDHPGLFSQIAGAMAVSGANIVDAKIVTLANGMALDSFWIQESDGAAFDTPSK 785
Query: 177 LSTIKELLFNVLRG 190
L+ + ++ VL G
Sbjct: 786 LAKLSTVIEQVLSG 799
>gi|222055851|ref|YP_002538213.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter daltonii FRC-32]
gi|221565140|gb|ACM21112.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter daltonii FRC-32]
Length = 897
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P RV IDN AD TVI + + +K G+L ++ L+++ L I + +S+ DVF V
Sbjct: 810 PTRVEIDNEVSADYTVIDIYTHDKVGLLYRITSALSELGLYIGVSKVSTKVDQVADVFYV 869
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G+KI D++ ++ I+ RL
Sbjct: 870 KDIFGQKILDQDKLEEIRGRL 890
>gi|302381407|ref|YP_003817230.1| UTP-GlnB uridylyltransferase, GlnD [Brevundimonas subvibrioides
ATCC 15264]
gi|302192035|gb|ADK99606.1| UTP-GlnB uridylyltransferase, GlnD [Brevundimonas subvibrioides
ATCC 15264]
Length = 890
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 49/88 (55%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID + ATVI+V ++ G+L ++ + L+D L I+ A+++ G +D F V
Sbjct: 769 PVVMIDPSASEGATVIEVSGADRPGLLAELSRTLSDHALSIRSAHVAGFGERAVDSFYVT 828
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAP 102
D G+KI + V+D + LE AP
Sbjct: 829 DARGRKITSEAVLDEVHAALEAVLDRAP 856
Score = 38.5 bits (88), Expect = 2.8, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+E T IE +G DRPGL +E+ L+D ++ +A + +RA +VTD
Sbjct: 778 SEGATVIEVSGADRPGLLAELSRTLSDHALSIRSAHVAGFGERAVDSFYVTD 829
>gi|352106684|ref|ZP_08961627.1| PII uridylyl-transferase [Halomonas sp. HAL1]
gi|350597727|gb|EHA13855.1| PII uridylyl-transferase [Halomonas sp. HAL1]
Length = 891
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 21/161 (13%)
Query: 48 LNDVNLVIKKAYI-SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL--ETD------- 97
+ + L I A I +S W ++ F V+D G+ IRD I+ ++Q L E D
Sbjct: 730 MEQLGLSIHDARIATSHNDWTLNTFIVLDSHGQPIRDPNHIEEMRQHLVEELDDPDDYPT 789
Query: 98 ----------ASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNA 147
F + P E T +E T DRPGL + V + + ++ A
Sbjct: 790 IVTRHTPRQLKHFKVPTEVLIEQDPANERTLLELTAPDRPGLLARVGRIFMEQDISLSAA 849
Query: 148 EIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+I T +R V +T + G + DP+R ++E L VL
Sbjct: 850 KIATLGERVEDVFFITTKA-GEPLTDPERQQQLRERLIEVL 889
>gi|381167755|ref|ZP_09876961.1| (Protein-PII) uridylyltransferase [Phaeospirillum molischianum DSM
120]
gi|380683128|emb|CCG41773.1| (Protein-PII) uridylyltransferase [Phaeospirillum molischianum DSM
120]
Length = 924
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV++DN TVI+++ ++ G+L + + + L I A+IS+ G +DVF V
Sbjct: 826 PPRVLVDNKPSRSHTVIEINGRDRPGLLYDITSAMTQLGLQISSAHISTYGERVVDVFYV 885
Query: 74 IDCDGKKIRDKEVIDYIQ 91
D G K+ + ++ I+
Sbjct: 886 KDVFGHKVEHERKLERIR 903
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 23/158 (14%)
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKI----RDKEVIDYIQQRLETDASFAPSLRSSVG 109
++ I+ G +D F V D +G + + + I+Q L A L S G
Sbjct: 755 IVDAKIITLTNGMALDTFFVQDSEGAPFDSPAKLNRLANTIEQVLSGRLRLAQELASRKG 814
Query: 110 VMPTE------------------EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 151
+P+ HT IE G DRPGL ++ + + L + +A I T
Sbjct: 815 NLPSRAHVFKVPPRVLVDNKPSRSHTVIEINGRDRPGLLYDITSAMTQLGLQISSAHIST 874
Query: 152 HNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLR 189
+ +R V +V D G+ ++ ++L I+ L L+
Sbjct: 875 YGERVVDVFYVKD-VFGHKVEHERKLERIRVTLLAALK 911
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 15/111 (13%)
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL--- 177
+TG D PGLFS++ +A N+V+A+I T + A S G P +L
Sbjct: 733 YTG-DHPGLFSQIAGAMAVSGANIVDAKIITLTNGMALDTFFVQDSEGAPFDSPAKLNRL 791
Query: 178 -STIKELLFNVLRGYDDFRKAKTSLS--------PPGIM--NRERRLHQIM 217
+TI+++L LR + K +L PP ++ N+ R H ++
Sbjct: 792 ANTIEQVLSGRLRLAQELASRKGNLPSRAHVFKVPPRVLVDNKPSRSHTVI 842
>gi|269127631|ref|YP_003301001.1| UTP-GlnB uridylyltransferase, GlnD [Thermomonospora curvata DSM
43183]
gi|268312589|gb|ACY98963.1| UTP-GlnB uridylyltransferase, GlnD [Thermomonospora curvata DSM
43183]
Length = 780
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 48/83 (57%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVF 71
+ PPRV I + ATV++V + ++ G+L ++ Q + L + KA + + G +DVF
Sbjct: 693 VPPPRVTIVEDASDTATVVEVRAHDRPGLLWRIGQAIGACGLQVDKARVDTLGAEAVDVF 752
Query: 72 NVIDCDGKKIRDKEVIDYIQQRL 94
V+D G+ +R+ + +++++
Sbjct: 753 YVVDAQGRPLREPAALSALREKV 775
>gi|188579682|ref|YP_001923127.1| PII uridylyl-transferase [Methylobacterium populi BJ001]
gi|179343180|gb|ACB78592.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium populi BJ001]
Length = 928
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ T +E TG DRPGL E+ L L N+ +A + T +RA V +VTD TG +
Sbjct: 830 SSRETVVEITGLDRPGLLYELTTALNRLSLNITSAHVATFGERAVDVFYVTD-LTGTRVM 888
Query: 173 DPKRLSTIKELLFNVL 188
P RL+ I+ + V
Sbjct: 889 QPDRLAMIRAAVMEVF 904
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V IDN + TV+++ +++ G+L ++ LN ++L I A++++ G +DVF V
Sbjct: 820 PPDVSIDNALSSRETVVEITGLDRPGLLYELTTALNRLSLNITSAHVATFGERAVDVFYV 879
Query: 74 IDCDGKKIRDKEVIDYIQQR-LETDASFAPSLRS 106
D G ++ + + I+ +E AS +LR+
Sbjct: 880 TDLTGTRVMQPDRLAMIRAAVMEVFASDVAALRA 913
>gi|258627348|ref|ZP_05722132.1| [Protein-PII] uridylyltransferase [Vibrio mimicus VM603]
gi|258580386|gb|EEW05351.1| [Protein-PII] uridylyltransferase [Vibrio mimicus VM603]
Length = 876
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 93/193 (48%), Gaps = 19/193 (9%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + V + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 677 SKPLVLLSKKATRGGTEVFVYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 736
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 737 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLHHFKVKTQVDFLPTKSK 796
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+ T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+ S G + +
Sbjct: 797 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN-SQGARLNEE 855
Query: 175 KRLSTIKELLFNV 187
+ ++L+ NV
Sbjct: 856 EEQLLREKLIENV 868
>gi|262170770|ref|ZP_06038448.1| [Protein-PII] uridylyltransferase [Vibrio mimicus MB-451]
gi|261891846|gb|EEY37832.1| [Protein-PII] uridylyltransferase [Vibrio mimicus MB-451]
Length = 876
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 93/193 (48%), Gaps = 19/193 (9%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + V + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 677 SKPLVLLSKKATRGGTEVFVYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 736
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 737 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLHHFKVKTQVDFLPTKSK 796
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+ T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+ S G + +
Sbjct: 797 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN-SQGARLNEE 855
Query: 175 KRLSTIKELLFNV 187
+ ++L+ NV
Sbjct: 856 EEQLLREKLIENV 868
>gi|254472092|ref|ZP_05085492.1| protein-P-II uridylyltransferase [Pseudovibrio sp. JE062]
gi|211958375|gb|EEA93575.1| protein-P-II uridylyltransferase [Pseudovibrio sp. JE062]
Length = 942
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Query: 99 SFAPSLRSSVGVMPT--EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
S A SL+++V V + E +T +E TG DRPGL S++ ++ L+ N+ +A + T ++A
Sbjct: 830 SKAFSLQTTVLVSNSWSENYTVLEVTGLDRPGLLSDLTTEISALNLNIASAHVGTFGEKA 889
Query: 157 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRG 190
V +VTD TG + + R +I++ L N G
Sbjct: 890 VDVFYVTD-LTGQKVHNVGRQESIRDRLKNAFDG 922
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 46/79 (58%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDC 76
V++ N+ + TV++V +++ G+L + ++ +NL I A++ + G +DVF V D
Sbjct: 839 VLVSNSWSENYTVLEVTGLDRPGLLSDLTTEISALNLNIASAHVGTFGEKAVDVFYVTDL 898
Query: 77 DGKKIRDKEVIDYIQQRLE 95
G+K+ + + I+ RL+
Sbjct: 899 TGQKVHNVGRQESIRDRLK 917
>gi|374328694|ref|YP_005078878.1| [protein-PII] uridylyltransferase [Pseudovibrio sp. FO-BEG1]
gi|359341482|gb|AEV34856.1| [Protein-PII] uridylyltransferase [Pseudovibrio sp. FO-BEG1]
Length = 942
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Query: 99 SFAPSLRSSVGVMPT--EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
S A SL+++V V + E +T +E TG DRPGL S++ ++ L+ N+ +A + T ++A
Sbjct: 830 SKAFSLQTTVLVSNSWSENYTVLEVTGLDRPGLLSDLTTEISALNLNIASAHVGTFGEKA 889
Query: 157 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRG 190
V +VTD TG + + R +I++ L N G
Sbjct: 890 VDVFYVTD-LTGQKVHNVGRQESIRDRLKNAFDG 922
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 46/79 (58%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDC 76
V++ N+ + TV++V +++ G+L + ++ +NL I A++ + G +DVF V D
Sbjct: 839 VLVSNSWSENYTVLEVTGLDRPGLLSDLTTEISALNLNIASAHVGTFGEKAVDVFYVTDL 898
Query: 77 DGKKIRDKEVIDYIQQRLE 95
G+K+ + + I+ RL+
Sbjct: 899 TGQKVHNVGRQESIRDRLK 917
>gi|359409332|ref|ZP_09201800.1| (protein-PII) uridylyltransferase [SAR116 cluster alpha
proteobacterium HIMB100]
gi|356676085|gb|EHI48438.1| (protein-PII) uridylyltransferase [SAR116 cluster alpha
proteobacterium HIMB100]
Length = 963
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV++ NN TVI+V+ ++ G+L Q+ L + L I A +S+ G +DVF V
Sbjct: 865 PPRVIVSNNRSNTHTVIEVNGADRPGLLYQITYHLVQLGLQINSATVSTYGEKVVDVFYV 924
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G KI + I+Q L
Sbjct: 925 KDVYGLKIEREASQKKIEQTL 945
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 79/186 (42%), Gaps = 24/186 (12%)
Query: 26 DATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS-DGGWFMDVFNVIDCDGKKIRDK 84
++T++ V + + G+ +++ + I A I++ G +D F + D D + + D
Sbjct: 765 ESTILVVMAADHPGLFSRIVGAVAVAGCSIMNARINTRHDGTILDQFRIQDKDRQAVIDP 824
Query: 85 EVID----YIQQRLETDASFAPSLRS----------SVGVMP--------TEEHTSIEFT 122
++ + I+Q L D S L+ ++ V P + HT IE
Sbjct: 825 QIQNRIAKIIEQSLAGDISLFRRLQERSAQITKRQKAMSVPPRVIVSNNRSNTHTVIEVN 884
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
G DRPGL ++ L L + +A + T+ ++ V +V D G I+ I++
Sbjct: 885 GADRPGLLYQITYHLVQLGLQINSATVSTYGEKVVDVFYVKD-VYGLKIEREASQKKIEQ 943
Query: 183 LLFNVL 188
L V
Sbjct: 944 TLMGVF 949
>gi|414175718|ref|ZP_11430122.1| [protein-PII] uridylyltransferase [Afipia broomeae ATCC 49717]
gi|410889547|gb|EKS37350.1| [protein-PII] uridylyltransferase [Afipia broomeae ATCC 49717]
Length = 947
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 862 SDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 920
Query: 173 DPKRLSTIKELLFNVLRGYDDFRK 196
P R + IK L ++L D K
Sbjct: 921 APTRQAAIKRALIHLLANGDAAEK 944
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 11 RMNP----PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGW 66
R+ P P V I+N TVI+V +++ G+L Q+ ++ +NL I A++++ G
Sbjct: 845 RLKPFSVEPEVSINNQWSDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGER 904
Query: 67 FMDVFNVIDCDGKKI 81
DVF V D G +I
Sbjct: 905 ARDVFYVTDLLGAQI 919
>gi|258620994|ref|ZP_05716028.1| [Protein-PII] uridylyltransferase [Vibrio mimicus VM573]
gi|424807474|ref|ZP_18232882.1| PII uridylyl-transferase [Vibrio mimicus SX-4]
gi|258586382|gb|EEW11097.1| [Protein-PII] uridylyltransferase [Vibrio mimicus VM573]
gi|342325416|gb|EGU21196.1| PII uridylyl-transferase [Vibrio mimicus SX-4]
Length = 876
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 93/193 (48%), Gaps = 19/193 (9%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + V + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 677 SKPLVLLSKKATRGGTEVFVYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 736
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 737 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLHHFKVKTQVDFLPTKSK 796
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+ T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+ S G + +
Sbjct: 797 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN-SQGARLNEE 855
Query: 175 KRLSTIKELLFNV 187
+ ++L+ NV
Sbjct: 856 EEQLLREKLIENV 868
>gi|23012593|ref|ZP_00052640.1| COG2844: UTP:GlnB (protein PII) uridylyltransferase
[Magnetospirillum magnetotacticum MS-1]
Length = 654
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ T +E TG DRPGL E+ L L N+ +A + T +RA V +VTD TG +
Sbjct: 556 SSRETVVEITGLDRPGLLYELTTALNRLSLNITSAHVATFGERAVDVFYVTD-LTGTRVM 614
Query: 173 DPKRLSTIKELLFNVL 188
P RL+ I+ + V
Sbjct: 615 QPDRLAMIRAAVMEVF 630
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V IDN + TV+++ +++ G+L ++ LN ++L I A++++ G +DVF V
Sbjct: 546 PPDVSIDNALSSRETVVEITGLDRPGLLYELTTALNRLSLNITSAHVATFGERAVDVFYV 605
Query: 74 IDCDGKKIRDKEVIDYIQQR-LETDASFAPSLRS 106
D G ++ + + I+ +E AS +LR+
Sbjct: 606 TDLTGTRVMQPDRLAMIRAAVMEVFASDVAALRA 639
>gi|389774314|ref|ZP_10192433.1| PII uridylyl-transferase [Rhodanobacter spathiphylli B39]
gi|388437913|gb|EIL94668.1| PII uridylyl-transferase [Rhodanobacter spathiphylli B39]
Length = 870
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 17/167 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V + + +T + V + ++ G+ V VL+ + + +A I SS G +D F +
Sbjct: 677 PLVAVHPLSVRGSTELFVCTPDRDGLFATVTAVLDRLRFSVMEARILSSSTGMALDTFLL 736
Query: 74 IDCDGKK----IRDKEVIDYIQQRLETDASFAPSLRS------------SVGVMPTEEHT 117
+D D ++ R +E+ +Q+ L A PS R + + T
Sbjct: 737 LDADSQQPVSAARAQELQQRLQRALAQSAGVQPSKRGMSRHQKHFQMTPRISFHAAGDRT 796
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ GTDRPGL + V V++ V +A I T +R +TD
Sbjct: 797 QLALVGTDRPGLLAAVAQVMSSTGVRVHDARIATFGERVEDFFQLTD 843
>gi|91974598|ref|YP_567257.1| PII uridylyl-transferase [Rhodopseudomonas palustris BisB5]
gi|91681054|gb|ABE37356.1| protein-P-II uridylyltransferase [Rhodopseudomonas palustris BisB5]
Length = 933
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 848 SDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 906
Query: 173 DPKRLSTIKELLFNVLRGYDDFRK 196
P R + IK L ++L D +K
Sbjct: 907 APTRQAAIKRALVHLLANGDAEQK 930
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P + I+NN TVI+V +++ G+L Q+ ++ +NL I A++++ G DVF V
Sbjct: 839 PEISINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVT 898
Query: 75 DCDGKKI 81
D G +I
Sbjct: 899 DLLGAQI 905
>gi|407772641|ref|ZP_11119943.1| PII uridylyl-transferase [Thalassospira profundimaris WP0211]
gi|407284594|gb|EKF10110.1| PII uridylyl-transferase [Thalassospira profundimaris WP0211]
Length = 913
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 80/193 (41%), Gaps = 27/193 (13%)
Query: 22 NTCADATVIKVDSVNKHGILLQVI--QVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGK 79
+T DAT I V + + G+ Q+ L N+V K +DG +D F V D +G+
Sbjct: 721 DTEIDATEITVHTTDHPGLFSQIAGAMALCGANVVDAKILTLADG-MALDTFFVQDTNGE 779
Query: 80 KIRDKEVIDYIQQRLET--DASFAPSL------------RSSV-GVMP--------TEEH 116
D +D ++ LE PS R++V V P + H
Sbjct: 780 AFNDSTKLDRLRDTLEKVISGQIRPSQEIERRQTKDNKHRTAVFKVEPNVIIDNKASRTH 839
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE T DR GL ++ L DL + +A I T +RA V +V D G I +
Sbjct: 840 TVIEITARDRLGLLYDITRALRDLSMQIASARISTFGERAVDVFYVKD-VFGLKIDSRTK 898
Query: 177 LSTIKELLFNVLR 189
+KE L +R
Sbjct: 899 FVQVKETLTQAIR 911
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+IDN TVI++ + ++ G+L + + L D+++ I A IS+ G +DVF V
Sbjct: 827 PNVIIDNKASRTHTVIEITARDRLGLLYDITRALRDLSMQIASARISTFGERAVDVFYVK 886
Query: 75 DCDGKKI 81
D G KI
Sbjct: 887 DVFGLKI 893
Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T I TD PGLFS++ +A NVV+A+I T D A + G A D +
Sbjct: 727 TEITVHTTDHPGLFSQIAGAMALCGANVVDAKILTLADGMALDTFFVQDTNGEAFNDSTK 786
Query: 177 LSTIKELLFNVLRG 190
L +++ L V+ G
Sbjct: 787 LDRLRDTLEKVISG 800
>gi|39933668|ref|NP_945944.1| PII uridylyl-transferase [Rhodopseudomonas palustris CGA009]
gi|39647514|emb|CAE26035.1| Protein PII uridylyltransferase [Rhodopseudomonas palustris CGA009]
Length = 949
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 864 SDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 922
Query: 173 DPKRLSTIKELLFNVLRGYDDFRK 196
P R + IK L ++L D K
Sbjct: 923 APTRQAAIKRALVHLLANGDAAEK 946
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 6 AKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
AKL + P V I+NN TVI+V +++ G+L Q+ ++ +NL I A++++ G
Sbjct: 846 AKLRAFVVEPEVEINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGE 905
Query: 66 WFMDVFNVIDCDGKKI 81
DVF V D G +I
Sbjct: 906 RARDVFYVTDLLGAQI 921
>gi|316932060|ref|YP_004107042.1| UTP-GlnB uridylyltransferase, GlnD [Rhodopseudomonas palustris
DX-1]
gi|315599774|gb|ADU42309.1| UTP-GlnB uridylyltransferase, GlnD [Rhodopseudomonas palustris
DX-1]
Length = 933
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 848 SDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 906
Query: 173 DPKRLSTIKELLFNVLRGYDDFRK 196
P R + IK L ++L D K
Sbjct: 907 APTRQAAIKRALVHLLANGDAAEK 930
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 6 AKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
AKL + P V I+NN TVI+V +++ G+L Q+ ++ +NL I A++++ G
Sbjct: 830 AKLRAFVVEPEVEINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGE 889
Query: 66 WFMDVFNVIDCDGKKI 81
DVF V D G +I
Sbjct: 890 RARDVFYVTDLLGAQI 905
>gi|171914691|ref|ZP_02930161.1| protein-P-II uridylyltransferase, putative [Verrucomicrobium
spinosum DSM 4136]
Length = 934
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P RV I+N+ D VI++ ++++ G+L + + + L I A I+++ G +D +
Sbjct: 834 PQRVYINNDLTTDYNVIEIQALDRIGLLYDIFMAIGQLGLNICHARINTEKGVALDAIYI 893
Query: 74 IDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVM 111
D +K+ DK+V+ +Q +LE +A F+ ++S G++
Sbjct: 894 QDKAEQKVTDKDVLKELQAQLE-EAVFSFGRQNSSGML 930
>gi|192289024|ref|YP_001989629.1| PII uridylyl-transferase [Rhodopseudomonas palustris TIE-1]
gi|192282773|gb|ACE99153.1| UTP-GlnB uridylyltransferase, GlnD [Rhodopseudomonas palustris
TIE-1]
Length = 933
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 848 SDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 906
Query: 173 DPKRLSTIKELLFNVLRGYDDFRK 196
P R + IK L ++L D K
Sbjct: 907 APTRQAAIKRALVHLLANGDAAEK 930
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 6 AKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
AKL + P V I+NN TVI+V +++ G+L Q+ ++ +NL I A++++ G
Sbjct: 830 AKLRAFVVEPEVEINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGE 889
Query: 66 WFMDVFNVIDCDGKKI 81
DVF V D G +I
Sbjct: 890 RARDVFYVTDLLGAQI 905
>gi|338972269|ref|ZP_08627644.1| uridylyltransferase [Bradyrhizobiaceae bacterium SG-6C]
gi|338234433|gb|EGP09548.1| uridylyltransferase [Bradyrhizobiaceae bacterium SG-6C]
Length = 928
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 843 SDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 901
Query: 173 DPKRLSTIKELLFNVLRGYDDFRK 196
P R + IK L ++L D K
Sbjct: 902 APTRQAAIKRALIHLLANGDASEK 925
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 11 RMNP----PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGW 66
R+ P P V I+N TVI+V +++ G+L Q+ ++ +NL I A++++ G
Sbjct: 826 RLKPFIVEPEVTINNQWSDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGER 885
Query: 67 FMDVFNVIDCDGKKI 81
DVF V D G +I
Sbjct: 886 ARDVFYVTDLLGAQI 900
>gi|414169144|ref|ZP_11424981.1| [protein-PII] uridylyltransferase [Afipia clevelandensis ATCC
49720]
gi|410885903|gb|EKS33716.1| [protein-PII] uridylyltransferase [Afipia clevelandensis ATCC
49720]
Length = 928
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 843 SDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 901
Query: 173 DPKRLSTIKELLFNVLRGYD 192
P R + IK L ++L D
Sbjct: 902 APTRQAAIKRALIHLLANGD 921
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 11 RMNP----PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGW 66
R+ P P V I+N TVI+V +++ G+L Q+ ++ +NL I A++++ G
Sbjct: 826 RLKPFIVEPEVTINNQWSDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGER 885
Query: 67 FMDVFNVIDCDGKKI 81
DVF V D G +I
Sbjct: 886 ARDVFYVTDLLGAQI 900
>gi|50402114|sp|P62223.1|GLND_RHOPA RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
Length = 929
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 844 SDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 902
Query: 173 DPKRLSTIKELLFNVLRGYDDFRK 196
P R + IK L ++L D K
Sbjct: 903 APTRQAAIKRALVHLLANGDAAEK 926
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 6 AKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
AKL + P V I+NN TVI+V +++ G+L Q+ ++ +NL I A++++ G
Sbjct: 826 AKLRAFVVEPEVEINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGE 885
Query: 66 WFMDVFNVIDCDGKKI 81
DVF V D G +I
Sbjct: 886 RARDVFYVTDLLGAQI 901
>gi|39996919|ref|NP_952870.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter sulfurreducens PCA]
gi|409912341|ref|YP_006890806.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter sulfurreducens KN400]
gi|39983807|gb|AAR35197.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter sulfurreducens PCA]
gi|298505932|gb|ADI84655.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter sulfurreducens KN400]
Length = 902
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 45/81 (55%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P RV IDN +D TVI + + +K G+L ++ L D+ L I A IS+ DVF V
Sbjct: 814 PSRVDIDNEVSSDYTVIDIYTHDKVGLLYRITSTLTDLGLYIGIAKISTKVDQVADVFYV 873
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G KI E ++ I+++L
Sbjct: 874 KDIFGHKITSVERLEEIREKL 894
>gi|333901617|ref|YP_004475490.1| UTP-GlnB uridylyltransferase, GlnD [Pseudomonas fulva 12-X]
gi|333116882|gb|AEF23396.1| UTP-GlnB uridylyltransferase, GlnD [Pseudomonas fulva 12-X]
Length = 897
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 9/106 (8%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
DEY +I+R P P+V I N+ TV+++ + ++ G+L ++ ++ D +L
Sbjct: 781 DEYPSIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVVELTAPDRPGLLAKIGRIFLDFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDAS 99
++ A I++ G DVF V D D + + D E+ +QQ + T S
Sbjct: 841 SVQNAKIATLGERVEDVFFVTDADNQPLSDPELCARLQQTIVTQLS 886
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + + +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMAQLNLNIHDARILTSTSQFTLDT 748
Query: 71 FNVIDCDGKKIRD---------KEVID----------YIQQRLETDA---SFAPSLRSSV 108
+ V++ +G I D + +ID IQ+R+ +FAP + ++
Sbjct: 749 YIVLEAEGGSIGDNPKRIQQIRQSLIDTLMHPDEYPSIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E T DRPGL +++ + D +V NA+I T +R V VTD +
Sbjct: 807 HNDAQRPVTVVELTAPDRPGLLAKIGRIFLDFDLSVQNAKIATLGERVEDVFFVTD-ADN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP+ + +++ + L
Sbjct: 866 QPLSDPELCARLQQTIVTQL 885
>gi|83594868|ref|YP_428620.1| PII uridylyl-transferase [Rhodospirillum rubrum ATCC 11170]
gi|386351633|ref|YP_006049881.1| PII uridylyl-transferase [Rhodospirillum rubrum F11]
gi|91206753|sp|Q2RNG2.1|GLND_RHORT RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|83577782|gb|ABC24333.1| GlnB (protein PII) uridylyltransferase, GlnD [Rhodospirillum rubrum
ATCC 11170]
gi|346720069|gb|AEO50084.1| PII uridylyl-transferase [Rhodospirillum rubrum F11]
Length = 936
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 45/82 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV++DN TVI+++ ++ G L V + L DV + I A +S+ G +D F V
Sbjct: 825 PPRVIVDNQASKTHTVIEINGRDRPGFLYAVTRALTDVAVQISSARVSTYGERVVDSFYV 884
Query: 74 IDCDGKKIRDKEVIDYIQQRLE 95
D G KI + + I++ LE
Sbjct: 885 KDVFGMKIVHRAKLAQIREALE 906
Score = 48.1 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 24/159 (15%)
Query: 48 LNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVI----DYIQQRLETDASFAPS 103
L VN++ K SDGG +D+F V +G I +E I ++ L D +
Sbjct: 749 LAGVNILDAKITTMSDGG-ALDIFTVQTLEGHAIEKEERIARLAKTVRDVLTGDLPLEKA 807
Query: 104 LRSSVGVMP------------------TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVV 145
LR +P ++ HT IE G DRPG V L D+ +
Sbjct: 808 LRRQPPRLPERTRHLTVPPRVIVDNQASKTHTVIEINGRDRPGFLYAVTRALTDVAVQIS 867
Query: 146 NAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
+A + T+ +R +V D G I +L+ I+E L
Sbjct: 868 SARVSTYGERVVDSFYVKD-VFGMKIVHRAKLAQIREAL 905
Score = 45.8 bits (107), Expect = 0.017, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 3/112 (2%)
Query: 104 LRSSVGVMPTEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH 161
L +V V+P E + + D PGLFS++ +A N+++A+I T +D A +
Sbjct: 712 LTVAVEVLPDPERAVSEVLVATDDHPGLFSKIAGAMALAGVNILDAKITTMSDGGALDIF 771
Query: 162 VTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRL 213
G+AI+ +R++ + + + +VL G KA PP + R R L
Sbjct: 772 TVQTLEGHAIEKEERIARLAKTVRDVLTGDLPLEKA-LRRQPPRLPERTRHL 822
>gi|86747159|ref|YP_483655.1| PII uridylyl-transferase [Rhodopseudomonas palustris HaA2]
gi|86570187|gb|ABD04744.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Rhodopseudomonas
palustris HaA2]
Length = 932
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++ +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 847 SDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 905
Query: 173 DPKRLSTIKELLFNVLRGYD 192
P R + IK L ++L D
Sbjct: 906 APTRQAAIKRALVHLLANGD 925
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 6 AKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
AKL + P V I+NN TVI+V +++ G+L Q+ ++ +NL I A++++ G
Sbjct: 829 AKLRAFVVEPEVSINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGE 888
Query: 66 WFMDVFNVIDCDGKKI 81
DVF V D G +I
Sbjct: 889 RARDVFYVTDLLGAQI 904
>gi|154244241|ref|YP_001415199.1| PII uridylyl-transferase [Xanthobacter autotrophicus Py2]
gi|154158326|gb|ABS65542.1| metal dependent phosphohydrolase [Xanthobacter autotrophicus Py2]
Length = 969
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ HT +E +G DRPGL + L+ L+ N+ +A + T +RA V +VTD G I
Sbjct: 879 SNRHTVVEVSGLDRPGLLFALTNTLSRLNLNIASAHVATFGERAVDVFYVTD-LMGAKIT 937
Query: 173 DPKRLSTIKELLFNVLRG 190
R STI+ L V G
Sbjct: 938 GAARQSTIRRALVAVFEG 955
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ++N TV++V +++ G+L + L+ +NL I A++++ G +DVF V
Sbjct: 870 PEVTVNNAWSNRHTVVEVSGLDRPGLLFALTNTLSRLNLNIASAHVATFGERAVDVFYVT 929
Query: 75 DCDGKKI 81
D G KI
Sbjct: 930 DLMGAKI 936
>gi|388512679|gb|AFK44401.1| unknown [Lotus japonicus]
Length = 224
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 22/212 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + N + D +V+ + S ++ +L + L D+ V+ A I ++G + +
Sbjct: 22 PNVTVVNWSDKDYSVVTIISKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPQAYQEYYIR 81
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVC 134
DG ++ D +QR+ A R S G+ +E TDR GL S V
Sbjct: 82 HIDGSPVKS----DAERQRVIQCLEAAIERRVSEGL-------KLELCTTDRVGLLSNVT 130
Query: 135 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL---RGY 191
+ + V AE+ T D+A +V+ S GY + D K + +I++ + N + +G
Sbjct: 131 RIFRENSLTVTRAEVTTKGDKAVNTFYVSGAS-GYLV-DSKTIESIRQAIGNTILKVKGT 188
Query: 192 DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDY 223
D K+ SP R L +F R +
Sbjct: 189 PDELKSTHQDSPT------RSLFSGLFKSRSF 214
>gi|374703800|ref|ZP_09710670.1| PII uridylyl-transferase [Pseudomonas sp. S9]
Length = 900
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 65/121 (53%), Gaps = 13/121 (10%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P PRV I N+ TVI++ + ++ G+L +V ++ D +L
Sbjct: 781 DDYPSIIQRRVPRQLKHFDFAPRVTIHNDAKRPLTVIELTAPDRPGLLARVGRIFLDFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPT 113
I+ A I++ G DVF V D + +++ D E+ +Q+ + + S A S++G P+
Sbjct: 841 SIQNAKIATLGERVEDVFFVTDANNQQLSDPELCTRLQETIVSQLSDA----STLGAEPS 896
Query: 114 E 114
+
Sbjct: 897 K 897
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T + + + ++H + + +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQLFIYAQDQHDFFAVTVAAMAQLNLNIHDARILTSTSQFTLDT 748
Query: 71 FNVIDCDGKKIRD---------KEVID----------YIQQRLETDAS---FAPSLRSSV 108
+ V++ DG I D + +ID IQ+R+ FAP R ++
Sbjct: 749 YIVLEGDGSSIGDNPARIKQIRQGLIDALINPDDYPSIIQRRVPRQLKHFDFAP--RVTI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T IE T DRPGL + V + D ++ NA+I T +R V VTD +
Sbjct: 807 HNDAKRPLTVIELTAPDRPGLLARVGRIFLDFDLSIQNAKIATLGERVEDVFFVTD-ANN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP+ + ++E + + L
Sbjct: 866 QQLSDPELCTRLQETIVSQL 885
>gi|337739621|ref|YP_004631349.1| [protein-PII] uridylyltransferase GlnD [Oligotropha carboxidovorans
OM5]
gi|386028639|ref|YP_005949414.1| [protein-PII] uridylyltransferase GlnD [Oligotropha carboxidovorans
OM4]
gi|336093707|gb|AEI01533.1| [protein-PII] uridylyltransferase GlnD [Oligotropha carboxidovorans
OM4]
gi|336097285|gb|AEI05108.1| [protein-PII] uridylyltransferase GlnD [Oligotropha carboxidovorans
OM5]
Length = 939
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+E +T IE +G DRPGL ++ ++ L N+ +A + T +R V +VTD G I
Sbjct: 855 SEVYTVIEVSGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVTD-LMGAQIT 913
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKA 197
P R + IK L ++L D R A
Sbjct: 914 APTRQAAIKRALVHLLSNADPTRGA 938
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 21 NNTCADA-TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGK 79
NN ++ TVI+V +++ G+L Q+ ++ ++L I A++++ G DVF V D G
Sbjct: 851 NNQWSEVYTVIEVSGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVTDLMGA 910
Query: 80 KI 81
+I
Sbjct: 911 QI 912
>gi|261253730|ref|ZP_05946303.1| [Protein-PII] uridylyltransferase [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|417954531|ref|ZP_12597565.1| PII uridylyl-transferase [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|260937121|gb|EEX93110.1| [Protein-PII] uridylyltransferase [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|342815251|gb|EGU50175.1| PII uridylyl-transferase [Vibrio orientalis CIP 102891 = ATCC
33934]
Length = 873
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 78/175 (44%), Gaps = 24/175 (13%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P ++I T + V ++H + V+ L+ N + A + +S G+ +D F V
Sbjct: 679 PLILISKKATRGGTEVFVYCKDQHALFASVVAELDRRNFNVHDAQVMTSKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLETDASFAPS---------------LRSSVGVMPTE- 114
+D +G I R K V ++ L A P+ ++++V +PT+
Sbjct: 739 LDQNGDAIDESRHKAVTKHLAHVL---ADGRPTKIKRRRTPRNLQHFKVKTTVDFLPTKS 795
Query: 115 -EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ T +EF D PGL + V A AD ++ A+I T +RA + +T S G
Sbjct: 796 KKRTLLEFVALDTPGLLATVGATFADQGVHLHAAKITTIGERAEDLFIITSPSGG 850
>gi|209883288|ref|YP_002287145.1| PII uridylyl-transferase [Oligotropha carboxidovorans OM5]
gi|209871484|gb|ACI91280.1| protein-P-II uridylyltransferase [Oligotropha carboxidovorans OM5]
Length = 942
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+E +T IE +G DRPGL ++ ++ L N+ +A + T +R V +VTD G I
Sbjct: 858 SEVYTVIEVSGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVTD-LMGAQIT 916
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKA 197
P R + IK L ++L D R A
Sbjct: 917 APTRQAAIKRALVHLLSNADPTRGA 941
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 21 NNTCADA-TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGK 79
NN ++ TVI+V +++ G+L Q+ ++ ++L I A++++ G DVF V D G
Sbjct: 854 NNQWSEVYTVIEVSGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVTDLMGA 913
Query: 80 KI 81
+I
Sbjct: 914 QI 915
>gi|330807779|ref|YP_004352241.1| phosphohydrolase [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|423695565|ref|ZP_17670055.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens Q8r1-96]
gi|327375887|gb|AEA67237.1| putative Phosphohydrolase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|388009553|gb|EIK70804.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens Q8r1-96]
Length = 900
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG K+IRD + DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIRDGLTEALRNPADYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRQVTVLELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFITD-AHN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP+ S ++E + L
Sbjct: 866 QPLSDPQLCSRLQEAIVQHL 885
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 4 EYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLV 54
+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 782 DYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRQVTVLELSAPDRPGLLARIGHIFLEFDLS 841
Query: 55 IKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF + D + + D ++ +Q+
Sbjct: 842 LQNAKIATLGERVEDVFFITDAHNQPLSDPQLCSRLQE 879
>gi|88812375|ref|ZP_01127625.1| Protein-P-II uridylyltransferase [Nitrococcus mobilis Nb-231]
gi|88790382|gb|EAR21499.1| Protein-P-II uridylyltransferase [Nitrococcus mobilis Nb-231]
Length = 900
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 24/174 (13%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDVFNV 73
P ++ID + T + V + ++ I + LN + L I+ A I++D G +D + V
Sbjct: 696 PLILIDPISTRGGTEVFVYTRDRDHIFALTVTALNQLGLDIQDARIITTDDGHTLDSYLV 755
Query: 74 IDCDGKKI----RDKEVIDYIQQRLETDASFA-PSLRS--------------SVGVMPTE 114
++ GK I R++E+I+++ L PS R+ P
Sbjct: 756 LEDTGKPIAAGYREREIIEHLSTMLCPGKPLPQPSTRTLPRRLRHFSTQTQIEFTAEPHN 815
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNV--VNAEIWTHNDRAAAVVHVTDHS 166
+ T++E DRPGL ++V A +HC V NA+I T +RA V +TD +
Sbjct: 816 DRTAMELITGDRPGLLAQVG--YAFVHCGVRLQNAKISTMGERAEDVFFLTDRN 867
>gi|85375192|ref|YP_459254.1| PII uridylyl-transferase [Erythrobacter litoralis HTCC2594]
gi|122543574|sp|Q2N784.1|GLND_ERYLH RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|84788275|gb|ABC64457.1| uridylyltransferase [Erythrobacter litoralis HTCC2594]
Length = 919
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 50/85 (58%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV+ DN+ TVI+V++ ++ +L ++ + L + ++++ A+I++ G D F V
Sbjct: 825 PRVLFDNDASGRFTVIEVNARDRAALLNRLGRALFENQVIVQSAHITAYGERAADTFYVT 884
Query: 75 DCDGKKIRDKEVIDYIQQRLETDAS 99
D G KI D+ +D I+Q L AS
Sbjct: 885 DLTGAKITDESRMDTIRQALLDAAS 909
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 75/183 (40%), Gaps = 23/183 (12%)
Query: 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVIDCDGKKIRDKE 85
AT++ V + + G+ ++ ++ I A I ++ GW +D + V D G+ ++
Sbjct: 726 ATLVTVIAADHPGLFYRIAGGIHLAGGNIIDARIHTTRNGWAIDNYLVQDPVGQPFAEER 785
Query: 86 VIDYIQQRLETDASFAPSLRSSVGVMPTEE---------------------HTSIEFTGT 124
+ I+Q + + L + P ++ T IE
Sbjct: 786 QLARIEQAIADAIANRGELVPKLAKRPLKQTRAGAFDVRPRVLFDNDASGRFTVIEVNAR 845
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
DR L + + L + V +A I + +RAA +VTD TG I D R+ TI++ L
Sbjct: 846 DRAALLNRLGRALFENQVIVQSAHITAYGERAADTFYVTD-LTGAKITDESRMDTIRQAL 904
Query: 185 FNV 187
+
Sbjct: 905 LDA 907
>gi|398930982|ref|ZP_10664913.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM48]
gi|398164505|gb|EJM52641.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM48]
Length = 900
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG K+IRD + DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDADGDSIGDNPARTKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ + DP S +++ + L
Sbjct: 866 HPLSDPLLCSRLQDAIVEQL 885
>gi|378949067|ref|YP_005206555.1| PII uridylyl-transferase [Pseudomonas fluorescens F113]
gi|359759081|gb|AEV61160.1| PII uridylyl-transferase [Pseudomonas fluorescens F113]
Length = 900
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 89/194 (45%), Gaps = 29/194 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG K+IRD + DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIRDGLTEALRNPADYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRQVTVLELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFITD-AHN 865
Query: 169 YAIKDPKRLSTIKE 182
+ DP+ S ++E
Sbjct: 866 QPLSDPQLCSRLQE 879
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 4 EYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLV 54
+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 782 DYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRQVTVLELSAPDRPGLLARIGHIFLEFDLS 841
Query: 55 IKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF + D + + D ++ +Q+
Sbjct: 842 LQNAKIATLGERVEDVFFITDAHNQPLSDPQLCSRLQE 879
>gi|224100729|ref|XP_002311991.1| predicted protein [Populus trichocarpa]
gi|222851811|gb|EEE89358.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 83/187 (44%), Gaps = 13/187 (6%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDV 70
NP V +DN T++K+ + G++ + + L D N+ I + S G +D+
Sbjct: 232 NPVSVTVDNAFSPSHTLVKILCKDHKGLIYDITRTLKDYNIQISYGRFLASRKGNCEVDL 291
Query: 71 FNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRP 127
F ++ DGKKI D + + RL + P + V P E +E +G RP
Sbjct: 292 F-LMQADGKKIVDPNKQNALCSRLRMEL-LCPLRLAVVSRGPDTELLVANPVELSGRGRP 349
Query: 128 GLFSEVCAVLADLHCNVVNAEIWTH--NDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLF 185
+F ++ L +L+ + + EI H +DR V + G + K I+E +
Sbjct: 350 LVFHDITLALKNLNTPIFSVEIGRHMIHDREWEVYRILLEGDGLPVSRNK----IEEGVR 405
Query: 186 NVLRGYD 192
VL G++
Sbjct: 406 KVLMGWE 412
>gi|302784983|ref|XP_002974263.1| hypothetical protein SELMODRAFT_101399 [Selaginella moellendorffii]
gi|302807877|ref|XP_002985632.1| hypothetical protein SELMODRAFT_122627 [Selaginella moellendorffii]
gi|300146541|gb|EFJ13210.1| hypothetical protein SELMODRAFT_122627 [Selaginella moellendorffii]
gi|300157861|gb|EFJ24485.1| hypothetical protein SELMODRAFT_101399 [Selaginella moellendorffii]
Length = 210
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 93/200 (46%), Gaps = 30/200 (15%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P VVID + TV++V ++ G LL ++ L D+ L + K + G + F++
Sbjct: 8 PIVVIDQDADPHTTVVEVSFGDRLGALLDTMKSLRDLGLTVVKGNVKMVGNTRRNRFSIT 67
Query: 75 DCD-GKKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEEH-----TSIEF 121
D G+K+ D E+++ I+ + ++S ++ + G+ P ++ +I+
Sbjct: 68 RADNGRKVEDPELLESIRLTIIDNLLKYHPESSARLAMGEAFGIKPPKKQEIQTFITIKE 127
Query: 122 TGT----------DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 171
G+ D+PGL E+ ++ D+ +V +AE+ T A HV+ G A+
Sbjct: 128 DGSDKSLLTIETADKPGLMIEILKIINDISVSVESAEMDTEGLIAKDKFHVS--YGGKAL 185
Query: 172 KDPKRLSTIKELLFNVLRGY 191
++ ++L N LR Y
Sbjct: 186 S-----KSLSQVLTNCLRYY 200
>gi|389879349|ref|YP_006372914.1| [protein-PII] uridylyltransferase [Tistrella mobilis KA081020-065]
gi|388530133|gb|AFK55330.1| [protein-PII] uridylyltransferase [Tistrella mobilis KA081020-065]
Length = 933
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV+IDN TVI+V + ++ G+L + VL+D+ L I A++++ G +D F V
Sbjct: 825 PRVLIDNRASNTQTVIEVTARDRPGLLFAITSVLSDLALTISSAHVATYGERAVDTFYVK 884
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + + +++ L
Sbjct: 885 DVFGLKITHQGKLTRVREEL 904
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 92/214 (42%), Gaps = 30/214 (14%)
Query: 3 DEYAKLIR---RMNPPRVVID--NNTCADATVIKVDSVNKHGILLQVI--QVLNDVNLVI 55
+ +A+L+ R P +VID + I V + + HG+ V L N+V
Sbjct: 697 ERHARLVAKADRQGPAPLVIDVAPDRFRSVAAITVYAPDHHGLFAGVAGAMALAGGNIVD 756
Query: 56 KKAYISSDGGWFMDVFNVIDCDGK----KIRDKEVIDYIQQRLETDASFAPSL------- 104
+ ++DG +D F V D D ++R + D + + L + A +L
Sbjct: 757 ARIVTTTDG-MALDTFWVQDSDRSAYDDEVRVARMRDLVGRTLSGELRPAKALAARRDGP 815
Query: 105 -RSSV-GVMP--------TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND 154
R+ V V P + T IE T DRPGL + +VL+DL + +A + T+ +
Sbjct: 816 KRTDVFQVTPRVLIDNRASNTQTVIEVTARDRPGLLFAITSVLSDLALTISSAHVATYGE 875
Query: 155 RAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
RA +V D G I +L+ ++E L L
Sbjct: 876 RAVDTFYVKD-VFGLKITHQGKLTRVREELLAAL 908
>gi|254226776|ref|ZP_04920350.1| protein-P-II uridylyltransferase [Vibrio cholerae V51]
gi|125620714|gb|EAZ49074.1| protein-P-II uridylyltransferase [Vibrio cholerae V51]
Length = 881
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 682 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 741
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 742 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSK 801
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 802 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 851
>gi|153803000|ref|ZP_01957586.1| protein-P-II uridylyltransferase [Vibrio cholerae MZO-3]
gi|124121443|gb|EAY40186.1| protein-P-II uridylyltransferase [Vibrio cholerae MZO-3]
Length = 881
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 682 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 741
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 742 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSK 801
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 802 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 851
>gi|15642260|ref|NP_231893.1| PII uridylyl-transferase [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121586159|ref|ZP_01675950.1| protein-P-II uridylyltransferase [Vibrio cholerae 2740-80]
gi|121729748|ref|ZP_01682187.1| protein-P-II uridylyltransferase [Vibrio cholerae V52]
gi|147673286|ref|YP_001217777.1| PII uridylyl-transferase [Vibrio cholerae O395]
gi|153217366|ref|ZP_01951117.1| protein-P-II uridylyltransferase [Vibrio cholerae 1587]
gi|153823644|ref|ZP_01976311.1| protein-P-II uridylyltransferase [Vibrio cholerae B33]
gi|153827573|ref|ZP_01980240.1| protein-P-II uridylyltransferase [Vibrio cholerae MZO-2]
gi|227082386|ref|YP_002810937.1| PII uridylyl-transferase [Vibrio cholerae M66-2]
gi|227118708|ref|YP_002820604.1| protein-P-II uridylyltransferase [Vibrio cholerae O395]
gi|254849392|ref|ZP_05238742.1| protein-P-II uridylyltransferase [Vibrio cholerae MO10]
gi|298500363|ref|ZP_07010168.1| protein-P-II uridylyltransferase [Vibrio cholerae MAK 757]
gi|9656824|gb|AAF95406.1| protein-P-II uridylyltransferase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121549571|gb|EAX59595.1| protein-P-II uridylyltransferase [Vibrio cholerae 2740-80]
gi|121628499|gb|EAX60985.1| protein-P-II uridylyltransferase [Vibrio cholerae V52]
gi|124113612|gb|EAY32432.1| protein-P-II uridylyltransferase [Vibrio cholerae 1587]
gi|126518839|gb|EAZ76062.1| protein-P-II uridylyltransferase [Vibrio cholerae B33]
gi|146315169|gb|ABQ19708.1| protein-P-II uridylyltransferase [Vibrio cholerae O395]
gi|149737953|gb|EDM52858.1| protein-P-II uridylyltransferase [Vibrio cholerae MZO-2]
gi|227010274|gb|ACP06486.1| protein-P-II uridylyltransferase [Vibrio cholerae M66-2]
gi|227014158|gb|ACP10368.1| protein-P-II uridylyltransferase [Vibrio cholerae O395]
gi|254845097|gb|EET23511.1| protein-P-II uridylyltransferase [Vibrio cholerae MO10]
gi|297541056|gb|EFH77110.1| protein-P-II uridylyltransferase [Vibrio cholerae MAK 757]
Length = 881
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 682 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 741
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 742 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSK 801
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 802 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 851
>gi|417825496|ref|ZP_12472084.1| protein-P-II uridylyltransferase [Vibrio cholerae HE48]
gi|340046981|gb|EGR07911.1| protein-P-II uridylyltransferase [Vibrio cholerae HE48]
Length = 876
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 677 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 736
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 737 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSK 796
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 797 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 846
>gi|153828190|ref|ZP_01980857.1| protein-P-II uridylyltransferase [Vibrio cholerae 623-39]
gi|148876279|gb|EDL74414.1| protein-P-II uridylyltransferase [Vibrio cholerae 623-39]
Length = 881
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 682 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 741
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 742 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSK 801
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 802 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 851
>gi|429212269|ref|ZP_19203434.1| PII uridylyl-transferase [Pseudomonas sp. M1]
gi|428156751|gb|EKX03299.1| PII uridylyl-transferase [Pseudomonas sp. M1]
Length = 900
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 32/194 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I+ A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAADQHDFFAVTVAAMDQLNLNIQDARIITSTSLFTLDT 748
Query: 71 FNVIDCDGKKIRD----------------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG I D K DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDADGGSIGDNPQRIAEIRQGLVDALKNPDDYPNIIQRRVPRQLKHFAFAPLV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ + + +E DRPGL + + + D +V NA+I T +R V +VTD +
Sbjct: 807 STDASRQVSVLEVIAPDRPGLLARIGGLFLDFDLSVRNAKIATLGERVEDVFYVTD-AHN 865
Query: 169 YAIKDP---KRLST 179
+ DP KRL
Sbjct: 866 QPLSDPDLCKRLQA 879
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P V I + +V++V + ++ G+L ++ + D +L
Sbjct: 781 DDYPNIIQRRVPRQLKHFAFAPLVTISTDASRQVSVLEVIAPDRPGLLARIGGLFLDFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
++ A I++ G DVF V D + + D ++ +Q L
Sbjct: 841 SVRNAKIATLGERVEDVFYVTDAHNQPLSDPDLCKRLQAAL 881
>gi|399912538|ref|ZP_10780852.1| PII uridylyl-transferase [Halomonas sp. KM-1]
Length = 893
Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 68/161 (42%), Gaps = 21/161 (13%)
Query: 48 LNDVNLVIKKAYI-SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL--ETD------- 97
+ + L I A I +S W ++ F V+D G+ IRD I+ I+ L E D
Sbjct: 730 MEQLGLSIHDARIATSSNDWTLNTFIVLDDLGRAIRDPARIEEIRAHLVEELDDPDDYPQ 789
Query: 98 ----------ASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNA 147
F + P E T +E T DRPGL + V + + ++ A
Sbjct: 790 IVTRHTPRQLRHFKVPTEVLIEQDPANERTLLELTAPDRPGLLARVGRIFMEQDISLSAA 849
Query: 148 EIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+I T +R V +TD S G + DP+R ++ L VL
Sbjct: 850 KIATLGERVEDVFFITDKS-GAPLTDPERQQRLRARLIEVL 889
>gi|421344317|ref|ZP_15794720.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-43B1]
gi|395940397|gb|EJH51078.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-43B1]
Length = 861
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 662 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 721
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 722 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSK 781
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 782 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 831
>gi|229522208|ref|ZP_04411625.1| [Protein-PII] uridylyltransferase [Vibrio cholerae TM 11079-80]
gi|419837969|ref|ZP_14361407.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-46B1]
gi|421354961|ref|ZP_15805293.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-45]
gi|423735926|ref|ZP_17709118.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-41B1]
gi|424010264|ref|ZP_17753198.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-44C1]
gi|229341133|gb|EEO06138.1| [Protein-PII] uridylyltransferase [Vibrio cholerae TM 11079-80]
gi|395954086|gb|EJH64699.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-45]
gi|408629352|gb|EKL02051.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-41B1]
gi|408856517|gb|EKL96212.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-46B1]
gi|408863294|gb|EKM02784.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-44C1]
Length = 876
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 677 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 736
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 737 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSK 796
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 797 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 846
>gi|429888049|ref|ZP_19369548.1| [Protein-PII] uridylyltransferase [Vibrio cholerae PS15]
gi|429224925|gb|EKY31233.1| [Protein-PII] uridylyltransferase [Vibrio cholerae PS15]
Length = 876
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 677 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 736
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 737 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSK 796
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 797 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 846
>gi|229513904|ref|ZP_04403366.1| [Protein-PII] uridylyltransferase [Vibrio cholerae TMA 21]
gi|229349085|gb|EEO14042.1| [Protein-PII] uridylyltransferase [Vibrio cholerae TMA 21]
Length = 876
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 677 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 736
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 737 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSK 796
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 797 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 846
>gi|254286066|ref|ZP_04961027.1| protein-P-II uridylyltransferase [Vibrio cholerae AM-19226]
gi|150423976|gb|EDN15916.1| protein-P-II uridylyltransferase [Vibrio cholerae AM-19226]
Length = 881
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F V
Sbjct: 684 PLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMV 743
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE--EH 116
+D +G+ I R + +I ++ LE A P +++ V +PT+ +
Sbjct: 744 LDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKR 803
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 804 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 851
>gi|421351981|ref|ZP_15802346.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-25]
gi|395952426|gb|EJH63040.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-25]
Length = 876
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 677 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 736
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 737 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSK 796
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 797 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 846
>gi|297580906|ref|ZP_06942831.1| protein-P-II uridylyltransferase [Vibrio cholerae RC385]
gi|297534732|gb|EFH73568.1| protein-P-II uridylyltransferase [Vibrio cholerae RC385]
Length = 881
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 682 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 741
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 742 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSK 801
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 802 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 851
>gi|404496286|ref|YP_006720392.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter metallireducens GS-15]
gi|418064989|ref|ZP_12702365.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter metallireducens RCH3]
gi|78193893|gb|ABB31660.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter metallireducens GS-15]
gi|373563262|gb|EHP89463.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter metallireducens RCH3]
Length = 899
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 45/80 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
RV IDN +D TVI + + +K GIL Q+ L ++ L I + IS+ DVF V
Sbjct: 815 ARVEIDNEVSSDYTVIDIYTHDKVGILYQITSTLTELGLYIGVSKISTKVDQVADVFYVK 874
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + E ++ I++RL
Sbjct: 875 DIFGHKITNPERLEEIRERL 894
>gi|422923565|ref|ZP_16956712.1| protein-P-II uridylyltransferase [Vibrio cholerae BJG-01]
gi|424591969|ref|ZP_18031393.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1037(10)]
gi|341643854|gb|EGS68116.1| protein-P-II uridylyltransferase [Vibrio cholerae BJG-01]
gi|408029997|gb|EKG66678.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1037(10)]
Length = 876
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 677 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 736
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 737 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSK 796
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 797 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 846
>gi|424618043|ref|ZP_18056714.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-42A1]
gi|395961418|gb|EJH71746.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-42A1]
Length = 876
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 677 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 736
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 737 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSK 796
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 797 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 846
>gi|229507664|ref|ZP_04397169.1| [Protein-PII] uridylyltransferase [Vibrio cholerae BX 330286]
gi|229512141|ref|ZP_04401620.1| [Protein-PII] uridylyltransferase [Vibrio cholerae B33]
gi|229519276|ref|ZP_04408719.1| [Protein-PII] uridylyltransferase [Vibrio cholerae RC9]
gi|229524265|ref|ZP_04413670.1| [Protein-PII] uridylyltransferase [Vibrio cholerae bv. albensis
VL426]
gi|229607168|ref|YP_002877816.1| PII uridylyl-transferase [Vibrio cholerae MJ-1236]
gi|255747043|ref|ZP_05420988.1| [Protein-PII] uridylyltransferase [Vibrio cholera CIRS 101]
gi|262161413|ref|ZP_06030523.1| [Protein-PII] uridylyltransferase [Vibrio cholerae INDRE 91/1]
gi|262168262|ref|ZP_06035959.1| [Protein-PII] uridylyltransferase [Vibrio cholerae RC27]
gi|360036138|ref|YP_004937901.1| PII uridylyl-transferase [Vibrio cholerae O1 str. 2010EL-1786]
gi|379742066|ref|YP_005334035.1| PII uridylyl-transferase [Vibrio cholerae IEC224]
gi|384425225|ref|YP_005634583.1| [protein-PII] uridylyltransferase [Vibrio cholerae LMA3984-4]
gi|417814289|ref|ZP_12460942.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-49A2]
gi|417818026|ref|ZP_12464655.1| protein-P-II uridylyltransferase [Vibrio cholerae HCUF01]
gi|418335271|ref|ZP_12944182.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-06A1]
gi|418338880|ref|ZP_12947774.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-23A1]
gi|418346804|ref|ZP_12951562.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-28A1]
gi|418350566|ref|ZP_12955297.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-43A1]
gi|418355711|ref|ZP_12958430.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-61A1]
gi|419827220|ref|ZP_14350719.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1033(6)]
gi|421317962|ref|ZP_15768530.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1032(5)]
gi|421322018|ref|ZP_15772571.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1038(11)]
gi|421325820|ref|ZP_15776344.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1041(14)]
gi|421329478|ref|ZP_15779988.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1042(15)]
gi|421333434|ref|ZP_15783911.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1046(19)]
gi|421336976|ref|ZP_15787437.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1048(21)]
gi|421340404|ref|ZP_15790836.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-20A2]
gi|421348410|ref|ZP_15798787.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-46A1]
gi|422897359|ref|ZP_16934803.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-40A1]
gi|422903557|ref|ZP_16938527.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-48A1]
gi|422907442|ref|ZP_16942240.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-70A1]
gi|422914286|ref|ZP_16948791.1| protein-P-II uridylyltransferase [Vibrio cholerae HFU-02]
gi|422926490|ref|ZP_16959503.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-38A1]
gi|423145812|ref|ZP_17133406.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-19A1]
gi|423150488|ref|ZP_17137802.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-21A1]
gi|423154307|ref|ZP_17141488.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-22A1]
gi|423157390|ref|ZP_17144483.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-32A1]
gi|423160961|ref|ZP_17147901.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-33A2]
gi|423165788|ref|ZP_17152512.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-48B2]
gi|423731810|ref|ZP_17705113.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-17A1]
gi|423769093|ref|ZP_17713231.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-50A2]
gi|423895955|ref|ZP_17727434.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-62A1]
gi|423931487|ref|ZP_17731827.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-77A1]
gi|424003240|ref|ZP_17746315.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-17A2]
gi|424007031|ref|ZP_17750001.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-37A1]
gi|424025011|ref|ZP_17764661.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-62B1]
gi|424027897|ref|ZP_17767499.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-69A1]
gi|424587177|ref|ZP_18026755.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1030(3)]
gi|424595829|ref|ZP_18035148.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1040(13)]
gi|424599742|ref|ZP_18038920.1| protein-P-II uridylyltransferase [Vibrio Cholerae CP1044(17)]
gi|424602503|ref|ZP_18041643.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1047(20)]
gi|424607436|ref|ZP_18046377.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1050(23)]
gi|424611254|ref|ZP_18050093.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-39A1]
gi|424614069|ref|ZP_18052854.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-41A1]
gi|424622827|ref|ZP_18061332.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-47A1]
gi|424645790|ref|ZP_18083525.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-56A2]
gi|424653561|ref|ZP_18090941.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-57A2]
gi|424657380|ref|ZP_18094665.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-81A2]
gi|440710501|ref|ZP_20891149.1| protein-P-II uridylyltransferase [Vibrio cholerae 4260B]
gi|443504608|ref|ZP_21071564.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-64A1]
gi|443508509|ref|ZP_21075270.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-65A1]
gi|443512353|ref|ZP_21078988.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-67A1]
gi|443515907|ref|ZP_21082417.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-68A1]
gi|443519701|ref|ZP_21086094.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-71A1]
gi|443524592|ref|ZP_21090802.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-72A2]
gi|443532186|ref|ZP_21098200.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-7A1]
gi|443535994|ref|ZP_21101865.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-80A1]
gi|443539527|ref|ZP_21105381.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-81A1]
gi|449055281|ref|ZP_21733949.1| PII-uridylyltransferase [Vibrio cholerae O1 str. Inaba G4222]
gi|50402122|sp|Q9KPV0.2|GLND_VIBCH RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|229337846|gb|EEO02863.1| [Protein-PII] uridylyltransferase [Vibrio cholerae bv. albensis
VL426]
gi|229343965|gb|EEO08940.1| [Protein-PII] uridylyltransferase [Vibrio cholerae RC9]
gi|229352106|gb|EEO17047.1| [Protein-PII] uridylyltransferase [Vibrio cholerae B33]
gi|229355169|gb|EEO20090.1| [Protein-PII] uridylyltransferase [Vibrio cholerae BX 330286]
gi|229369823|gb|ACQ60246.1| [Protein-PII] uridylyltransferase [Vibrio cholerae MJ-1236]
gi|255735445|gb|EET90845.1| [Protein-PII] uridylyltransferase [Vibrio cholera CIRS 101]
gi|262023154|gb|EEY41858.1| [Protein-PII] uridylyltransferase [Vibrio cholerae RC27]
gi|262028724|gb|EEY47378.1| [Protein-PII] uridylyltransferase [Vibrio cholerae INDRE 91/1]
gi|327484778|gb|AEA79185.1| [Protein-PII] uridylyltransferase [Vibrio cholerae LMA3984-4]
gi|340036775|gb|EGQ97751.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-49A2]
gi|340037749|gb|EGQ98724.1| protein-P-II uridylyltransferase [Vibrio cholerae HCUF01]
gi|341620497|gb|EGS46268.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-48A1]
gi|341620633|gb|EGS46400.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-70A1]
gi|341621242|gb|EGS46989.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-40A1]
gi|341636528|gb|EGS61223.1| protein-P-II uridylyltransferase [Vibrio cholerae HFU-02]
gi|341645880|gb|EGS70004.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-38A1]
gi|356416647|gb|EHH70272.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-06A1]
gi|356417810|gb|EHH71423.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-21A1]
gi|356422650|gb|EHH76124.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-19A1]
gi|356427999|gb|EHH81230.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-22A1]
gi|356430522|gb|EHH83731.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-23A1]
gi|356431788|gb|EHH84988.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-28A1]
gi|356439280|gb|EHH92267.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-32A1]
gi|356444238|gb|EHH97050.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-33A2]
gi|356445062|gb|EHH97871.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-43A1]
gi|356450289|gb|EHI03019.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-48B2]
gi|356452209|gb|EHI04888.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-61A1]
gi|356647292|gb|AET27347.1| PII uridylyl-transferase [Vibrio cholerae O1 str. 2010EL-1786]
gi|378795576|gb|AFC59047.1| PII uridylyl-transferase [Vibrio cholerae IEC224]
gi|395916220|gb|EJH27050.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1032(5)]
gi|395917658|gb|EJH28486.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1041(14)]
gi|395919012|gb|EJH29836.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1038(11)]
gi|395928012|gb|EJH38775.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1042(15)]
gi|395928836|gb|EJH39589.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1046(19)]
gi|395932075|gb|EJH42819.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1048(21)]
gi|395939687|gb|EJH50369.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-20A2]
gi|395942989|gb|EJH53665.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-46A1]
gi|395958328|gb|EJH68824.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-56A2]
gi|395958738|gb|EJH69209.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-57A2]
gi|395970366|gb|EJH80137.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-47A1]
gi|395972525|gb|EJH82115.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1030(3)]
gi|395975181|gb|EJH84678.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1047(20)]
gi|408006605|gb|EKG44743.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-39A1]
gi|408011829|gb|EKG49630.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-41A1]
gi|408031198|gb|EKG67835.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1040(13)]
gi|408041099|gb|EKG77239.1| protein-P-II uridylyltransferase [Vibrio Cholerae CP1044(17)]
gi|408042427|gb|EKG78479.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1050(23)]
gi|408052501|gb|EKG87540.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-81A2]
gi|408608010|gb|EKK81413.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1033(6)]
gi|408622742|gb|EKK95712.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-17A1]
gi|408633370|gb|EKL05731.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-50A2]
gi|408653714|gb|EKL24869.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-77A1]
gi|408654657|gb|EKL25792.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-62A1]
gi|408844885|gb|EKL85008.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-37A1]
gi|408845774|gb|EKL85889.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-17A2]
gi|408869891|gb|EKM09178.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-62B1]
gi|408878520|gb|EKM17521.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-69A1]
gi|439973830|gb|ELP50034.1| protein-P-II uridylyltransferase [Vibrio cholerae 4260B]
gi|443431079|gb|ELS73633.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-64A1]
gi|443434917|gb|ELS81063.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-65A1]
gi|443438741|gb|ELS88459.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-67A1]
gi|443442844|gb|ELS96147.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-68A1]
gi|443446700|gb|ELT03359.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-71A1]
gi|443449450|gb|ELT09744.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-72A2]
gi|443457576|gb|ELT24973.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-7A1]
gi|443460884|gb|ELT31964.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-80A1]
gi|443465627|gb|ELT40287.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-81A1]
gi|448265323|gb|EMB02558.1| PII-uridylyltransferase [Vibrio cholerae O1 str. Inaba G4222]
Length = 876
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 677 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 736
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 737 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSK 796
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 797 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 846
>gi|422308202|ref|ZP_16395355.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1035(8)]
gi|408618067|gb|EKK91156.1| protein-P-II uridylyltransferase [Vibrio cholerae CP1035(8)]
Length = 876
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 677 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 736
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 737 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSK 796
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 797 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 846
>gi|422911100|ref|ZP_16945728.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-09]
gi|424660765|ref|ZP_18098012.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-16]
gi|341632472|gb|EGS57338.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-09]
gi|408050138|gb|EKG85311.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-16]
Length = 876
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 677 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 736
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 737 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSK 796
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 797 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 846
>gi|406894154|gb|EKD39032.1| hypothetical protein ACD_75C00526G0001, partial [uncultured
bacterium]
Length = 771
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
+VVIDN + + +VI+V + + G L + Q + D L I KAYI+++ +DVF V
Sbjct: 682 ASKVVIDNKSSENYSVIEVYASDSPGQLYHITQSMADFGLNIHKAYIATELEQLIDVFYV 741
Query: 74 IDCDGKKIRDKEVIDYIQQ 92
+D G+K+ D++ + Q
Sbjct: 742 LDSRGQKLVDEDFRQEVTQ 760
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 105 RSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
RS V TE+ + DRPGL +++C V+A + VV A+I+T D VV V D
Sbjct: 571 RSLVVASETEDSWQLLIMTVDRPGLLAKICGVMALNNLTVVKAQIFTWAD--GTVVDVID 628
>gi|403057411|ref|YP_006645628.1| protein-P-II uridylyltransferase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402804737|gb|AFR02375.1| protein-P-II uridylyltransferase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 930
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 87/190 (45%), Gaps = 19/190 (10%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P V+I + T I + S ++ + V L+ NL + A I +S G MD
Sbjct: 729 VNKPLVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 788
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASF--------APSLR-----SSVGVMPT-- 113
F V++ DG + E+I + ++ T S+ +P LR + V +PT
Sbjct: 789 FIVLEPDGSPLAQDRHEMIRHALEQALTHRSYQHPRVRRPSPKLRHFSVPTEVNFLPTHT 848
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
+ + +E + D+PGL + + + ADL+ ++ A I T +R + + D S A+K
Sbjct: 849 DRRSYMELSALDQPGLLARIGEIFADLNLSLHGARISTIGERVEDLFILAD-SDRRALKP 907
Query: 174 PKRLSTIKEL 183
RL + L
Sbjct: 908 DLRLKLQERL 917
>gi|51244781|ref|YP_064665.1| [protein-PII] uridylyltransferase [Desulfotalea psychrophila LSv54]
gi|50875818|emb|CAG35658.1| probable [Protein-PII] uridylyltransferase [Desulfotalea
psychrophila LSv54]
Length = 856
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRVV+DN + +V++V +V++ +L + Q L D + I KAYI+++ +DVF V+
Sbjct: 768 PRVVVDNESSDTYSVLEVYAVDRPHLLYHLAQTLADFGVNIYKAYIATEVEQLIDVFYVL 827
Query: 75 DCDGKKI 81
D G+K+
Sbjct: 828 DSRGEKL 834
>gi|417821593|ref|ZP_12468207.1| protein-P-II uridylyltransferase [Vibrio cholerae HE39]
gi|419830711|ref|ZP_14354196.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-1A2]
gi|419834394|ref|ZP_14357849.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-61A2]
gi|422918100|ref|ZP_16952418.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-02A1]
gi|423823002|ref|ZP_17717012.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-55C2]
gi|423856967|ref|ZP_17720819.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-59A1]
gi|423883595|ref|ZP_17724406.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-60A1]
gi|423957568|ref|ZP_17735311.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-40]
gi|423985548|ref|ZP_17738862.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-46]
gi|423998525|ref|ZP_17741777.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-02C1]
gi|424017422|ref|ZP_17757251.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-55B2]
gi|424020347|ref|ZP_17760130.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-59B1]
gi|424625721|ref|ZP_18064182.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-50A1]
gi|424630209|ref|ZP_18068493.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-51A1]
gi|424634253|ref|ZP_18072353.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-52A1]
gi|424637330|ref|ZP_18075338.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-55A1]
gi|424641238|ref|ZP_18079121.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-56A1]
gi|424649306|ref|ZP_18086969.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-57A1]
gi|443528223|ref|ZP_21094267.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-78A1]
gi|340039224|gb|EGR00199.1| protein-P-II uridylyltransferase [Vibrio cholerae HE39]
gi|341636982|gb|EGS61676.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-02A1]
gi|408011662|gb|EKG49469.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-50A1]
gi|408017616|gb|EKG55107.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-52A1]
gi|408022723|gb|EKG59918.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-56A1]
gi|408023118|gb|EKG60298.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-55A1]
gi|408032022|gb|EKG68621.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-57A1]
gi|408054177|gb|EKG89163.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-51A1]
gi|408620484|gb|EKK93496.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-1A2]
gi|408634978|gb|EKL07213.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-55C2]
gi|408640314|gb|EKL12110.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-59A1]
gi|408640661|gb|EKL12449.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-60A1]
gi|408649216|gb|EKL20533.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-61A2]
gi|408656672|gb|EKL27766.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-40]
gi|408663665|gb|EKL34527.1| protein-P-II uridylyltransferase [Vibrio cholerae HE-46]
gi|408852424|gb|EKL92252.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-02C1]
gi|408859619|gb|EKL99276.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-55B2]
gi|408866924|gb|EKM06295.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-59B1]
gi|443453481|gb|ELT17304.1| protein-P-II uridylyltransferase [Vibrio cholerae HC-78A1]
Length = 876
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 677 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 736
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 737 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSK 796
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T +EF D PGL + V A A+L+ ++ A+I T +RA + +T+
Sbjct: 797 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTN 846
>gi|414164976|ref|ZP_11421223.1| [protein-PII] uridylyltransferase [Afipia felis ATCC 53690]
gi|410882756|gb|EKS30596.1| [protein-PII] uridylyltransferase [Afipia felis ATCC 53690]
Length = 943
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 1/118 (0%)
Query: 80 KIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLAD 139
KIR E + Q D F + ++ +T IE TG DRPGL ++ ++
Sbjct: 826 KIRLPETVAKRTQTRTKDKVFVVEPEVVINNQWSDVYTVIEVTGLDRPGLLYQLTTAISK 885
Query: 140 LHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKA 197
L N+ +A + T +R V +VTD G I P R + IK L ++L D R A
Sbjct: 886 LSLNIGSAHVATFGERVRDVFYVTD-LMGAQITAPTRQAAIKRALVHLLANPDVARGA 942
Score = 43.5 bits (101), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P VVI+N TVI+V +++ G+L Q+ ++ ++L I A++++ G DVF V
Sbjct: 850 PEVVINNQWSDVYTVIEVTGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVT 909
Query: 75 DCDGKKI 81
D G +I
Sbjct: 910 DLMGAQI 916
>gi|254558851|ref|YP_003065946.1| [Protein-PII] uridylyltransferase [Methylobacterium extorquens DM4]
gi|254266129|emb|CAX21881.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Methylobacterium
extorquens DM4]
Length = 928
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ T +E TG DRPGL E+ L L N+ +A + T +RA V +VTD TG +
Sbjct: 830 SSRETVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYVTD-LTGTRVV 888
Query: 173 DPKRLSTIKELLFNVL 188
P RL+ I+ + V
Sbjct: 889 QPDRLAMIRAAVMEVF 904
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V IDN + TV+++ +++ G+L ++ LN ++L I A++++ G +DVF V
Sbjct: 820 PPDVSIDNALSSRETVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYV 879
Query: 74 IDCDGKKIRDKEVIDYIQQR-LETDASFAPSLRS 106
D G ++ + + I+ +E AS +LR+
Sbjct: 880 TDLTGTRVVQPDRLAMIRAAVMEVFASDVAALRA 913
>gi|303290516|ref|XP_003064545.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454143|gb|EEH51450.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 271
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 80/184 (43%), Gaps = 35/184 (19%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+I+N ATV+ V + G LL L + L I +A +S ++ F +
Sbjct: 53 PAVIINNTEDPLATVVTVAFGDVLGQLLDTAASLKSLGLNIVRAEVSDTTESGVNKFYIT 112
Query: 75 DC-DGKKIRDKEVIDYIQ---------------------QRLET-----------DASFA 101
D +KI + ++ I+ Q +E A A
Sbjct: 113 DARTSEKITKSKTLELIRMTIINNMLQYHPEAADYLVEGQHIEMPGDRDADANPLGARVA 172
Query: 102 PSLRSSVGVMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAV 159
P++++SV V T + + T TDRPGL ++ A L DL NV++AEI T +A +
Sbjct: 173 PAVKTSVVVDNTSGARQSKLIITTTDRPGLLVDIVATLKDLSLNVISAEIDTIGPKAYDI 232
Query: 160 VHVT 163
V+VT
Sbjct: 233 VYVT 236
>gi|423097068|ref|ZP_17084864.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens Q2-87]
gi|397889129|gb|EJL05612.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens Q2-87]
Length = 777
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 83/194 (42%), Gaps = 25/194 (12%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 566 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 625
Query: 71 FNVIDCDGKKIRD-----KEVIDYIQQRLETDASF-------APSLRSSVGVMP------ 112
+ V+D DG I D K++ D + + L A + P P
Sbjct: 626 YIVLDTDGDSIGDNPARVKQIRDGLTEALRNPADYPTIIQRRVPRQLKHFAFAPLVTIHN 685
Query: 113 --TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+ T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 686 DAQRQVTVLELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFITD-AHNQP 744
Query: 171 IKDPKRLSTIKELL 184
+ DP+ S ++E +
Sbjct: 745 LSDPQLCSRLQEAI 758
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 4 EYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLV 54
+Y +I+R P P V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 659 DYPTIIQRRVPRQLKHFAFAPLVTIHNDAQRQVTVLELSAPDRPGLLARIGHIFLEFDLS 718
Query: 55 IKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF + D + + D ++ +Q+
Sbjct: 719 LQNAKIATLGERVEDVFFITDAHNQPLSDPQLCSRLQE 756
>gi|298290064|ref|YP_003692003.1| UTP-GlnB uridylyltransferase, GlnD [Starkeya novella DSM 506]
gi|296926575|gb|ADH87384.1| UTP-GlnB uridylyltransferase, GlnD [Starkeya novella DSM 506]
Length = 932
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
HT +E +G DRPGL + L+ L+ N+ +A I T +RA V +VTD G I
Sbjct: 852 HTVVEVSGLDRPGLLYGLTQTLSRLNLNIASAHIATFGERAVDVFYVTD-LMGAKIIGAA 910
Query: 176 RLSTIKELLFNVLRGYDDFRKA 197
R S I+ L VL D+ A
Sbjct: 911 RHSAIRRALLQVLDADDEANAA 932
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ++N+ TV++V +++ G+L + Q L+ +NL I A+I++ G +DVF V
Sbjct: 840 PEVTLNNSWSNRHTVVEVSGLDRPGLLYGLTQTLSRLNLNIASAHIATFGERAVDVFYVT 899
Query: 75 DCDGKKI 81
D G KI
Sbjct: 900 DLMGAKI 906
>gi|163849787|ref|YP_001637830.1| PII uridylyl-transferase [Methylobacterium extorquens PA1]
gi|240136999|ref|YP_002961468.1| [Protein-PII] uridylyltransferase [Methylobacterium extorquens AM1]
gi|418060313|ref|ZP_12698231.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium extorquens DSM
13060]
gi|163661392|gb|ABY28759.1| protein-P-II uridylyltransferase [Methylobacterium extorquens PA1]
gi|240006965|gb|ACS38191.1| [Protein-PII] uridylyltransferase (PII uridylyl- transferase)
(Uridylyl-removing enzyme) (UTase) [Methylobacterium
extorquens AM1]
gi|373566138|gb|EHP92149.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium extorquens DSM
13060]
Length = 928
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ T +E TG DRPGL E+ L L N+ +A + T +RA V +VTD TG +
Sbjct: 830 SSRETVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYVTD-LTGTRVV 888
Query: 173 DPKRLSTIKELLFNVL 188
P RL+ I+ + V
Sbjct: 889 QPDRLAMIRAAVMEVF 904
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V IDN + TV+++ +++ G+L ++ LN ++L I A++++ G +DVF V
Sbjct: 820 PPDVSIDNALSSRETVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYV 879
Query: 74 IDCDGKKIRDKEVIDYIQQR-LETDASFAPSLRS 106
D G ++ + + I+ +E AS +LR+
Sbjct: 880 TDLTGTRVVQPDRLAMIRAAVMEVFASDVAALRA 913
>gi|153820325|ref|ZP_01972992.1| [Protein-PII] uridylyltransferase, partial [Vibrio cholerae NCTC
8457]
gi|126509132|gb|EAZ71726.1| [Protein-PII] uridylyltransferase [Vibrio cholerae NCTC 8457]
Length = 334
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + + + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 135 SKPLVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 194
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 195 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSK 254
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+ T +EF D PGL + V A A+L+ ++ A+I T +RA
Sbjct: 255 KRTLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERA 296
>gi|95929135|ref|ZP_01311879.1| UTP-GlnB uridylyltransferase, GlnD [Desulfuromonas acetoxidans DSM
684]
gi|95134633|gb|EAT16288.1| UTP-GlnB uridylyltransferase, GlnD [Desulfuromonas acetoxidans DSM
684]
Length = 892
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV IDN + TV+ V ++++ G+L Q+ L + + I + IS+ G D F V
Sbjct: 806 PPRVDIDNEVSDEYTVVDVTTMDRVGLLYQIANSLKKIGIYIGVSKISTKGDRAGDTFYV 865
Query: 74 IDCDGKKIRDKEVIDYIQQRLETDAS 99
D G KI E +D +++ L D S
Sbjct: 866 QDIFGHKIVQPEKLDELRETLIKDLS 891
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 36 NKHGILLQVIQVLNDVNLV---IKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
K GI + ++QV D N+ K A I D WF+ +D +K R ++D +Q
Sbjct: 743 QKSGIAVDILQVGRDGNIYDDDRKWATIEKDLIWFLQGRGDVDEQVEK-RKSSILDLSRQ 801
Query: 93 RLETDASFAPSL--RSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIW 150
P++ R + ++E+T ++ T DR GL ++ L + + ++I
Sbjct: 802 --------VPTIPPRVDIDNEVSDEYTVVDVTTMDRVGLLYQIANSLKKIGIYIGVSKIS 853
Query: 151 THNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
T DRA +V D G+ I P++L ++E L L
Sbjct: 854 TKGDRAGDTFYVQD-IFGHKIVQPEKLDELRETLIKDL 890
>gi|226528888|ref|NP_001143395.1| uncharacterized protein LOC100276033 [Zea mays]
gi|195619682|gb|ACG31671.1| hypothetical protein [Zea mays]
Length = 277
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 40/182 (21%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V+ID ++ DAT++++ ++ G LL + L ++ L + KA + D F +
Sbjct: 71 PKVIIDQDSDPDATIVEITLGDRLGDLLDTMSALKNLGLNVVKASVCLDSTGKHIKFAIT 130
Query: 75 DC-DGKKIRDKEVIDYIQ---------------QRLETDASFAPSLRSSVGVMPTEE--- 115
G+KI D E+++ ++ +L A+F P PTEE
Sbjct: 131 RAFTGRKIDDPELLEAVRLTIINNMIQYHPESSSQLAMGATFGPE-------APTEEVDV 183
Query: 116 ----HTSIEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH 161
H I G DRPGL ++ +++D+ NV + E T A A H
Sbjct: 184 DIATHIDIYDDGPERSLLVVETADRPGLLVDLVKIISDISINVQSGEFDTEGLLAKAKFH 243
Query: 162 VT 163
V+
Sbjct: 244 VS 245
>gi|407802895|ref|ZP_11149734.1| PII uridylyl-transferase [Alcanivorax sp. W11-5]
gi|407023055|gb|EKE34803.1| PII uridylyl-transferase [Alcanivorax sp. W11-5]
Length = 902
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 51/84 (60%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P +V+I N+ D TV+ V ++++ G+L ++ ++ + +L+++ A I++ G DVF +
Sbjct: 802 PTQVIISNDIVNDRTVVDVQTLDRPGLLARIGRMFMEFDLLLQNARIATLGERVEDVFFI 861
Query: 74 IDCDGKKIRDKEVIDYIQQRLETD 97
DG + D ++ +QQRL+ +
Sbjct: 862 TQKDGGPVTDPDLCQRLQQRLKEE 885
>gi|398892828|ref|ZP_10645783.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM55]
gi|398184929|gb|EJM72355.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM55]
Length = 900
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSTSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG K+IRD + DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPARIKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ + DP S +++ + L
Sbjct: 866 HPLSDPLLCSRLQDAIVEQL 885
>gi|325294777|ref|YP_004281291.1| uridylyltransferase [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325065225|gb|ADY73232.1| UTP-GlnB uridylyltransferase, GlnD [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 874
Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 11 RMNPP----RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGW 66
R N P +V IDN T T+++V + ++ G+L + +VL ++N +++A I+++G
Sbjct: 782 RRNIPLPVNKVKIDNKTSDRYTIVEVSTYDRLGVLYAITKVLLEMNTRLRRAIIATEGNR 841
Query: 67 FMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
+D F + D + +KI D +++ I++++
Sbjct: 842 VIDSFYITDMEYRKITDAKLLKEIEEKI 869
>gi|85712036|ref|ZP_01043090.1| UTP:GlnB (protein PII) uridylyltransferase [Idiomarina baltica
OS145]
gi|85694222|gb|EAQ32166.1| UTP:GlnB (protein PII) uridylyltransferase [Idiomarina baltica
OS145]
Length = 873
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 90/188 (47%), Gaps = 20/188 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P ++I + T + V ++ + V VL+ L I A I ++ G+ MD F +
Sbjct: 681 PLILIGDENNYGTTELFVYHHDEGHLFAAVAGVLDSQQLTILDAQILATRDGFVMDTFVL 740
Query: 74 IDCDGKKIRD--------KEVIDYIQQRLETDASFAP--------SLRSSVGVMPTEEH- 116
+ +GK + + + ++D + +R + + P S+++ V +P +
Sbjct: 741 LQRNGKPLTETRRIEEVKQHLLDVLHRRRKVPKNNRPLSRRLKNFSVKTQVNFLPVKHRG 800
Query: 117 -TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
T+ E DRPGL + + A+L L +++ A+I T ++A + V+ H G A+ D +
Sbjct: 801 RTTFELVALDRPGLVARIAAILQRLDVSLLAAKITTIGEQAEDLFIVSSHR-GEALSDEQ 859
Query: 176 RLSTIKEL 183
+L+ +++
Sbjct: 860 KLALKQQI 867
>gi|92112694|ref|YP_572622.1| PII uridylyl-transferase [Chromohalobacter salexigens DSM 3043]
gi|91795784|gb|ABE57923.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Chromohalobacter
salexigens DSM 3043]
Length = 891
Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 21/161 (13%)
Query: 48 LNDVNLVIKKAYI-SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL--ETD------- 97
+ + L I A I +S W ++ F V+D DG+ IRD + ++ I+ L E D
Sbjct: 730 MEQLGLSIHDARIATSSNDWTLNTFIVLDDDGEPIRDPQRLEEIRHHLVEELDDPADYPR 789
Query: 98 ----------ASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNA 147
F R + T +E T DRPGL + V + + + A
Sbjct: 790 IVTRHTSRQLKHFKVPTRVVIEQDTANARTIVELTAPDRPGLLARVGRIFMEQDIALSAA 849
Query: 148 EIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+I T +R V +TD + G + DP+R + ++E L L
Sbjct: 850 KIATLGERVEDVFFITDKA-GEPLTDPERQARLRERLCETL 889
Score = 41.6 bits (96), Expect = 0.41, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 47/81 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P RVVI+ +T T++++ + ++ G+L +V ++ + ++ + A I++ G DVF +
Sbjct: 805 PTRVVIEQDTANARTIVELTAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFI 864
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G+ + D E +++RL
Sbjct: 865 TDKAGEPLTDPERQARLRERL 885
>gi|222147341|ref|YP_002548298.1| PII uridylyl-transferase [Agrobacterium vitis S4]
gi|254798828|sp|B9JZI2.1|GLND_AGRVS RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|221734331|gb|ACM35294.1| protein-P-II uridylyltransferase [Agrobacterium vitis S4]
Length = 941
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I N+ TVI+++ +++ G+L +V VL D++L I A I++ G +D F VI
Sbjct: 826 PHVTISNSLSNKFTVIEIECLDRIGLLAEVTAVLADLSLDIHSARITTFGEKVIDTFYVI 885
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAP 102
D G+KI ++ I RL+ S P
Sbjct: 886 DLVGQKITNENRQGSISVRLKAVMSEQP 913
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 5/130 (3%)
Query: 78 GKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVL 137
GKK R EVI + + + +F ++ + + T IE DR GL +EV AVL
Sbjct: 801 GKK-RLPEVIATRTKGRKRNKTFTVKPHVTISNSLSNKFTVIEIECLDRIGLLAEVTAVL 859
Query: 138 ADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKA 197
ADL ++ +A I T ++ +V D G I + R +I L V+ D +
Sbjct: 860 ADLSLDIHSARITTFGEKVIDTFYVID-LVGQKITNENRQGSISVRLKAVMSEQPDELRE 918
Query: 198 KTSLSPPGIM 207
+ P GI+
Sbjct: 919 QM---PSGII 925
>gi|222084682|ref|YP_002543211.1| PII uridylyl-transferase [Agrobacterium radiobacter K84]
gi|398379620|ref|ZP_10537740.1| (protein-PII) uridylyltransferase [Rhizobium sp. AP16]
gi|221722130|gb|ACM25286.1| protein-P-II uridylyltransferase [Agrobacterium radiobacter K84]
gi|397722252|gb|EJK82796.1| (protein-PII) uridylyltransferase [Rhizobium sp. AP16]
Length = 971
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I A I++ G +D F V
Sbjct: 848 PPSVTISNSLSNKFTVIEVECLDRTGLLSEITSVLSDLSLDIHSARITTFGEKVIDSFYV 907
Query: 74 IDCDGKKIRDKEVIDYIQQRLE 95
D G+KI ++ I RL+
Sbjct: 908 TDLVGQKISNENKRANITARLK 929
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE DR GL SE+ +VL+DL ++ +A I T ++ +VTD G I + +
Sbjct: 862 TVIEVECLDRTGLLSEITSVLSDLSLDIHSARITTFGEKVIDSFYVTD-LVGQKISNENK 920
Query: 177 LSTIKELLFNVLRGYDD 193
+ I L V+ G +D
Sbjct: 921 RANITARLKPVMAGEED 937
>gi|168008130|ref|XP_001756760.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691998|gb|EDQ78357.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 213
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 96/211 (45%), Gaps = 35/211 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID + ++AT++++ ++ G LL I+ L D+ L + + ++++G ++
Sbjct: 7 PIVLIDQESDSEATIVEISFGDRLGALLDTIKALKDLGLNVIRGVVTTEGSRLRRKKFLV 66
Query: 75 --DCDGKKIRDKEVIDYIQ---------------QRLETDASFAPSLRSSVGVMPTEEHT 117
+ KK+ D E+++ I+ ++L +F+ + + + H
Sbjct: 67 TRSANNKKVEDPELLEAIRLTIINNLLQYHPESSEQLAMGVAFSDTPPKNQIDVDVATHV 126
Query: 118 SIEFTGT---------DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
++ G+ DRPGL E+ V+ D+ V +AEI T A +VT H
Sbjct: 127 TVTREGSRSLLLVETADRPGLLLEILKVICDISIFVESAEIDTEGLIAKDKFYVTYHGDV 186
Query: 169 YAIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
+ +++E+L N LR Y R+ +T
Sbjct: 187 LS-------KSMEEVLTNALRYY--LRRPET 208
>gi|218528430|ref|YP_002419246.1| PII uridylyl-transferase [Methylobacterium extorquens CM4]
gi|218520733|gb|ACK81318.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium extorquens
CM4]
Length = 928
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ T +E TG DRPGL E+ L L N+ +A + T +RA V +VTD TG +
Sbjct: 830 SSRETVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYVTD-LTGTRVV 888
Query: 173 DPKRLSTIKELLFNVL 188
P RL+ I+ + V
Sbjct: 889 QPDRLAMIRAAVMEVF 904
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V IDN + TV+++ +++ G+L ++ LN ++L I A++++ G +DVF V
Sbjct: 820 PPDVSIDNALSSRETVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYV 879
Query: 74 IDCDGKKI 81
D G ++
Sbjct: 880 TDLTGTRV 887
>gi|389693889|ref|ZP_10181983.1| (protein-PII) uridylyltransferase [Microvirga sp. WSM3557]
gi|388587275|gb|EIM27568.1| (protein-PII) uridylyltransferase [Microvirga sp. WSM3557]
Length = 916
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V IDN+ + TVI++ +++ G+L + L +NL I A+I + G +DVF V
Sbjct: 819 PPEVNIDNSLSSRQTVIEISGLDRPGLLYDLTTALGKLNLNIASAHIVTFGEKAVDVFYV 878
Query: 74 IDCDGKKI 81
D G KI
Sbjct: 879 TDLTGTKI 886
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ T IE +G DRPGL ++ L L+ N+ +A I T ++A V +VTD TG I
Sbjct: 829 SSRQTVIEISGLDRPGLLYDLTTALGKLNLNIASAHIVTFGEKAVDVFYVTD-LTGTKIT 887
Query: 173 DPKRLSTIKELLFNVLRG 190
R +TI L V +
Sbjct: 888 HAGRQATITRTLLEVFKA 905
>gi|413934235|gb|AFW68786.1| hypothetical protein ZEAMMB73_680007 [Zea mays]
Length = 277
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 40/182 (21%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V+ID ++ DAT++++ ++ G LL + L ++ L + KA + D F +
Sbjct: 71 PKVIIDQDSDPDATIVEITLGDRLGDLLDTMSALKNLGLNVVKASVCLDSTGKHIKFAIT 130
Query: 75 DC-DGKKIRDKEVIDYIQ---------------QRLETDASFAPSLRSSVGVMPTEE--- 115
G+KI D E+++ ++ +L A+F P PTEE
Sbjct: 131 RAFTGRKIDDPELLEAVRLTIINNMIQYHPESSSQLAMGATFGPE-------APTEEVDV 183
Query: 116 ----HTSIEFTG----------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH 161
H I G DRPGL ++ +++D+ NV + E T A A H
Sbjct: 184 DIATHIDIYDDGPERSLLVVETADRPGLLVDLVKIISDISINVQSGEFDTEGLLAKAKFH 243
Query: 162 VT 163
V+
Sbjct: 244 VS 245
>gi|404398828|ref|ZP_10990412.1| PII uridylyl-transferase [Pseudomonas fuscovaginae UPB0736]
Length = 900
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + V++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAVMDQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG K+IRD + DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPKRVKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E + DRPGL + + + + ++ NA+I T +R V VTD +
Sbjct: 807 HNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFVTD-AQN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP+ S +++ + L
Sbjct: 866 QPLSDPQLCSRLQDAIVEQL 885
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF V D + + D ++ +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFVTDAQNQPLSDPQLCSRLQ 878
>gi|170749943|ref|YP_001756203.1| PII uridylyl-transferase [Methylobacterium radiotolerans JCM 2831]
gi|170656465|gb|ACB25520.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium radiotolerans
JCM 2831]
Length = 935
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ T +E TG DRPGL E+ + L N+ +A + T +RA V +VTD TG +
Sbjct: 837 SSRETVVEITGLDRPGLLYELTTAFSRLSLNITSAHVATFGERAVDVFYVTD-LTGTRVT 895
Query: 173 DPKRLSTIKELLFNVL 188
P R + I+ + +V
Sbjct: 896 QPDRQAAIRAAVMDVF 911
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 41/68 (60%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V+IDN + TV+++ +++ G+L ++ + ++L I A++++ G +DVF V
Sbjct: 827 PPDVIIDNALSSRETVVEITGLDRPGLLYELTTAFSRLSLNITSAHVATFGERAVDVFYV 886
Query: 74 IDCDGKKI 81
D G ++
Sbjct: 887 TDLTGTRV 894
>gi|323137182|ref|ZP_08072261.1| UTP-GlnB uridylyltransferase, GlnD [Methylocystis sp. ATCC 49242]
gi|322397540|gb|EFY00063.1| UTP-GlnB uridylyltransferase, GlnD [Methylocystis sp. ATCC 49242]
Length = 938
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
+T IE +G DR GL ++ ++ L+ N+ +A I T +RA +VTD TG I P+
Sbjct: 850 YTVIEVSGLDREGLLFDLTNAISKLNLNIASAHIVTFGERAVDAFYVTD-LTGAKIIAPQ 908
Query: 176 RLSTIKELLFNVLRGYDDFRKAK 198
R +TIK L V + + R A+
Sbjct: 909 RQATIKRQLLEVFQPSAEKRPAR 931
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P VV+DN+ TVI+V +++ G+L + ++ +NL I A+I + G +D F V
Sbjct: 838 PEVVVDNSLSNVYTVIEVSGLDREGLLFDLTNAISKLNLNIASAHIVTFGERAVDAFYVT 897
Query: 75 DCDGKKI 81
D G KI
Sbjct: 898 DLTGAKI 904
>gi|307943361|ref|ZP_07658705.1| protein-P-II uridylyltransferase [Roseibium sp. TrichSKD4]
gi|307772991|gb|EFO32208.1| protein-P-II uridylyltransferase [Roseibium sp. TrichSKD4]
Length = 945
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 50/80 (62%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDC 76
V+++N+ D TV+++ +++ G+L + + ++ +NL I A+I++ G +DVF V D
Sbjct: 846 VLVNNSISDDYTVVEITGLDRPGLLFDLTRAISTLNLNIGSAHITTFGEKVVDVFYVTDL 905
Query: 77 DGKKIRDKEVIDYIQQRLET 96
G+KI + + I++RLE
Sbjct: 906 TGQKIANIGRQEIIRERLEA 925
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++++T +E TG DRPGL ++ ++ L+ N+ +A I T ++ V +VTD TG I
Sbjct: 853 SDDYTVVEITGLDRPGLLFDLTRAISTLNLNIGSAHITTFGEKVVDVFYVTD-LTGQKIA 911
Query: 173 DPKRLSTIKELLFNVLRGYDDF 194
+ R I+E L + G D
Sbjct: 912 NIGRQEIIRERLEAAVGGNVDM 933
>gi|329847428|ref|ZP_08262456.1| protein-P-II uridylyltransferase [Asticcacaulis biprosthecum C19]
gi|328842491|gb|EGF92060.1| protein-P-II uridylyltransferase [Asticcacaulis biprosthecum C19]
Length = 948
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 24/182 (13%)
Query: 26 DATVIKVDSVNKHGILLQVIQVLNDV--NLVIKKAYISSDGGWFMDVFNVIDCDGKKIR- 82
+AT + + ++ G+ + + ++ N+V + + SS G +DVF V D G
Sbjct: 745 NATAFSISADDRPGLFADLSRAFANMGGNVVGAQVFTSSSGH-ALDVFYVQDSQGLPFGH 803
Query: 83 -DKEVIDYIQQRLETDA-----------SFAPSLRSSVGVMPT--------EEHTSIEFT 122
D + + +Q+LE A S ++ + PT T IE +
Sbjct: 804 DDAQRMKQAEQQLEQAALGHLPPPVAYRSALAGRTAAFAIAPTVAFDDASKANATIIEVS 863
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
G DRPGL +++ V+A L ++ +A I + +RA +VTDH + ++ K+
Sbjct: 864 GRDRPGLLADLVDVMARLRMDIASAHIDCYGERAVDAFYVTDHFKKSQLTAGQKQVLKKQ 923
Query: 183 LL 184
LL
Sbjct: 924 LL 925
>gi|406895502|gb|EKD40049.1| hypothetical protein ACD_75C00195G0001, partial [uncultured
bacterium]
Length = 651
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
+VVIDN + +VI+V + + G L + Q + D L I KAYI+++ +DVF V
Sbjct: 562 ASKVVIDNKSSEMYSVIEVYAADLPGQLYHITQAMADFGLNIHKAYIATEVEQLIDVFYV 621
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
+D G+K+ D++ + Q L
Sbjct: 622 LDSRGRKLVDEDFRHEVTQGL 642
Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 79/198 (39%), Gaps = 24/198 (12%)
Query: 16 RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG-GWFMDVFNVI 74
R ++ + DA + + +V++ G+L ++ V+ NL + KA I + G +DV +V
Sbjct: 451 RSLVLASETEDAWQLLIMTVDRPGLLAKICGVMALNNLTVVKAQIFTWADGTVVDVIDVR 510
Query: 75 DCDGKKIRDK------EVIDY-IQQRLETDASFAPSLRSSVGV----------------M 111
DG +K E +D I+ R+ L S G
Sbjct: 511 SMDGLSFAEKGWRSLNEQLDLAIEHRMGLSHRLYRKLSSGYGRRSQMVGEVASKVVIDNK 570
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 171
+E ++ IE D PG + +AD N+ A I T ++ V +V D +
Sbjct: 571 SSEMYSVIEVYAADLPGQLYHITQAMADFGLNIHKAYIATEVEQLIDVFYVLDSRGRKLV 630
Query: 172 KDPKRLSTIKELLFNVLR 189
+ R + LL ++ R
Sbjct: 631 DEDFRHEVTQGLLHSIGR 648
>gi|125540993|gb|EAY87388.1| hypothetical protein OsI_08795 [Oryza sativa Indica Group]
Length = 223
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 48/115 (41%), Gaps = 17/115 (14%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGV-------MP 112
I SDG WF+ + + T AS S R S+G+ M
Sbjct: 58 IWSDGRWFIRSWTSSMSPTASVASSP----------TTASSPTSSRLSLGMWNGPTRPMA 107
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
E T++E TG R GL SEV AVLAD+ C VV W H ++ + + T
Sbjct: 108 LEGLTALELTGAGRTGLISEVFAVLADMDCGVVEGRAWMHRVHLGCLIFLRNEET 162
>gi|359483492|ref|XP_002273615.2| PREDICTED: glycogen phosphorylase 1-like [Vitis vinifera]
Length = 981
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 78/177 (44%), Gaps = 21/177 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V +D D+T + + NK G+L + +V + L I KA + +G +F F V
Sbjct: 65 PTVTVDAAVSTDSTSFVIRARNKIGLLQVITRVFKVLGLHIDKATVEFEGDFFTQKFFVT 124
Query: 75 DCDGKKIRDKEVIDYIQQRL----------ETDASFAPSLRSSV----GVMPTEEHTSIE 120
D G+KI D+E +D I + L T+ S PS R V G+ P + +
Sbjct: 125 DSHGRKIEDQENLDRITKALLEAIDGGGGWGTETSVGPSTRGIVVRRAGLGPKPQAERM- 183
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
F DR L ++ ++ D+ + + H+ R + D + KDPKRL
Sbjct: 184 FALMDR-FLSNDPVSLQKDILDHAL-----AHSVRDRLIERWHDTQQYFKRKDPKRL 234
>gi|338999274|ref|ZP_08637924.1| PII uridylyl-transferase [Halomonas sp. TD01]
gi|338763838|gb|EGP18820.1| PII uridylyl-transferase [Halomonas sp. TD01]
Length = 891
Score = 50.8 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 21/161 (13%)
Query: 48 LNDVNLVIKKAYI-SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL--ETD------- 97
+ + L I A I +S W ++ F V+D G+ IRD E I+ +++ L E D
Sbjct: 730 MEQLGLSIHDARIATSHNDWTLNTFIVLDHYGQPIRDPEHIEEMRRHLVEELDDPDDYPE 789
Query: 98 ----------ASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNA 147
F + P E T +E T DRPGL + V + + + A
Sbjct: 790 IVTRHTPRQLKHFKVPTEVVIEQDPANERTLLELTAPDRPGLLARVGRIFMEQDIALSAA 849
Query: 148 EIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+I T +R V +T + G + DP+R ++E L VL
Sbjct: 850 KIATLGERVEDVFFITTKA-GEPLTDPERQQQLRERLIEVL 889
>gi|152988175|ref|YP_001346865.1| PII uridylyl-transferase [Pseudomonas aeruginosa PA7]
gi|166990444|sp|A6V1D0.1|GLND_PSEA7 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|150963333|gb|ABR85358.1| protein-P-II uridylyltransferase [Pseudomonas aeruginosa PA7]
Length = 900
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 32/194 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + + I + + ++H + ++ +NL I+ A I+S + +D
Sbjct: 689 PLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDT 748
Query: 71 FNVIDCDGKKIRD----------------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG I + K DY IQ+R+ +FAP + S
Sbjct: 749 YIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIST 808
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ + + +E DRPGL + + + D +V NA+I T +R V ++TD +
Sbjct: 809 DAL--RQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITD-ARN 865
Query: 169 YAIKDP---KRLST 179
+ DP KRL
Sbjct: 866 QPLADPDLCKRLQA 879
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I + +V++V + ++ G+L ++ + D +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
++ A I++ G DVF + D + + D ++ +Q L
Sbjct: 841 SVQNAKIATLGERVEDVFYITDARNQPLADPDLCKRLQAAL 881
>gi|398349930|ref|YP_006395394.1| [protein-PII] uridylyltransferase GlnD [Sinorhizobium fredii USDA
257]
gi|390125256|gb|AFL48637.1| [protein-PII] uridylyltransferase GlnD [Sinorhizobium fredii USDA
257]
Length = 971
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I N TVI+V+ +++ G+L +V VL+D++L I A+I++ G +D F V
Sbjct: 853 PEVTISNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVT 912
Query: 75 DCDGKKIRDKEVIDYIQQRLET 96
D G KI ++ I RL+
Sbjct: 913 DLVGAKITNENRQANIAARLKA 934
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 62/130 (47%), Gaps = 5/130 (3%)
Query: 78 GKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVL 137
G+K R EVI + + +F + ++ + + T IE G DR GL SEV AVL
Sbjct: 828 GRK-RLPEVIASRTRARKRSKAFTVTPEVTISNTLSNKFTVIEVEGLDRTGLLSEVTAVL 886
Query: 138 ADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKA 197
+DL ++ +A I T ++ +VTD G I + R + I L VL G D +
Sbjct: 887 SDLSLDIASAHITTFGEKVIDTFYVTD-LVGAKITNENRQANIAARLKAVLAGEVDEARE 945
Query: 198 KTSLSPPGIM 207
+ P GI+
Sbjct: 946 RM---PSGII 952
>gi|296448846|ref|ZP_06890683.1| UTP-GlnB uridylyltransferase, GlnD [Methylosinus trichosporium
OB3b]
gi|296253644|gb|EFH00834.1| UTP-GlnB uridylyltransferase, GlnD [Methylosinus trichosporium
OB3b]
Length = 896
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 30/211 (14%)
Query: 5 YAKLIRRMN----PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQ---VLNDVNLVIKK 57
+A+L+R +N P +D +T + A + V + H LL +I + N+V
Sbjct: 669 HARLLRELNNAQAPLATTVDLDTKSGAVELTVVA-QDHRRLLSIIAGACAASGANIVDAH 727
Query: 58 AYISSDGGWFMDVFNV----IDCDGKKIRDKEVIDYIQQRL--ETDASFAPSLRSS---- 107
+ ++DG +F +D D + R + V DYI++ L E S A + RS+
Sbjct: 728 IFTTADGLALDTIFFSRAFPLDEDETR-RARRVADYIEKALRGEIAISEAVAARSAKDRS 786
Query: 108 --VGVMP--------TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAA 157
+ P + T IE +G DR GL ++ +++L+ N+ +A I T +RA
Sbjct: 787 LAFDIAPDIVIDNSFSNVATVIEVSGLDRVGLLFDLTNAISNLNLNIGSAHIVTFGERAV 846
Query: 158 AVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+VTD TG I R +TIK L V
Sbjct: 847 DSFYVTD-LTGGKILSASRQATIKRQLLEVF 876
>gi|331006419|ref|ZP_08329722.1| (Protein-PII) uridylyltransferase [gamma proteobacterium IMCC1989]
gi|330419719|gb|EGG94082.1| (Protein-PII) uridylyltransferase [gamma proteobacterium IMCC1989]
Length = 905
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 26/185 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS--DGGWFMD 69
P V+I +++ T I + + K I +L+ NL I+ A I S G MD
Sbjct: 695 PLVIISDSSVLGEHAVTQIFIRADLKQNIFAATTTILDHFNLNIQSAQIHSATSSGHTMD 754
Query: 70 VFNVIDCDGKKI-RDKEVI------------------DYIQQRLETDAS-FAPSLRSSVG 109
F V+D D I ++ E++ D I++R+ F+ R+S+
Sbjct: 755 TFYVLDQDDLPIGQNPEIVTQIIDLLLEEFSIADKYSDIIKRRIPRQLKYFSAPTRTSIH 814
Query: 110 VMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
+ E+T +E DRPG + + +L + + +V A+I T +R + +TD + G
Sbjct: 815 NDISNEYTVLEVISPDRPGFLARLARILVEYNIELVTAKITTLGERVEDIFFITD-ADGN 873
Query: 170 AIKDP 174
+ DP
Sbjct: 874 PLSDP 878
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 53/103 (51%), Gaps = 9/103 (8%)
Query: 3 DEYAKLIRR---------MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y+ +I+R P R I N+ + TV++V S ++ G L ++ ++L + N+
Sbjct: 788 DKYSDIIKRRIPRQLKYFSAPTRTSIHNDISNEYTVLEVISPDRPGFLARLARILVEYNI 847
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLET 96
+ A I++ G D+F + D DG + D + + +Q + T
Sbjct: 848 ELVTAKITTLGERVEDIFFITDADGNPLSDPALCEQLQHAICT 890
>gi|407972980|ref|ZP_11153893.1| PII uridylyl-transferase [Nitratireductor indicus C115]
gi|407431751|gb|EKF44422.1| PII uridylyl-transferase [Nitratireductor indicus C115]
Length = 932
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 85 EVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNV 144
E+I+ + + +F R +G + + +E G DRPGL SE+ L+DL ++
Sbjct: 813 EIIEKRARPRRSTRAFRVEPRVEIGNALSNRFSVVEIKGLDRPGLLSELTETLSDLSLDI 872
Query: 145 VNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+A I T ++ +VTD TG I P RL I L L
Sbjct: 873 ASAHITTFGEKVIDTFYVTD-LTGQKIVSPDRLDAICRALLETL 915
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I N +V+++ +++ G+L ++ + L+D++L I A+I++ G +D F V
Sbjct: 832 PRVEIGNALSNRFSVVEIKGLDRPGLLSELTETLSDLSLDIASAHITTFGEKVIDTFYVT 891
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G+KI + +D I + L
Sbjct: 892 DLTGQKIVSPDRLDAICRAL 911
>gi|325578503|ref|ZP_08148603.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae ATCC
33392]
gi|325159739|gb|EGC71869.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae ATCC
33392]
Length = 861
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 33/196 (16%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVID 75
V I N + T I V ++ + +V+ + I A I +SD G+ D F + +
Sbjct: 675 VKISNRFSSGGTEIFVYCPDQANLFNKVVSTIGAKKFSIHDAQILTSDDGYVFDSFIITE 734
Query: 76 CDGKKIRDKEVIDYIQQRLET------------DASFAPSLRSSVGVMPTE--------- 114
+G+ +R + ++ LET SFA + + + T+
Sbjct: 735 LNGELVRSER-----RRELETVLTSVLLGEKLPSMSFANNRQLQHFTVKTDVRFLKETKK 789
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
EHT +E D+PGL +++ + +L N+ NA+I T ++A +T+ G A+ +
Sbjct: 790 EHTELEVVALDKPGLLAQISQIFTELKLNICNAKITTVGEKAEDFFILTN-EKGIALTEE 848
Query: 175 KRLSTIKELLFNVLRG 190
+R LL NVL G
Sbjct: 849 ER-----GLLENVLYG 859
>gi|452878644|ref|ZP_21955838.1| PII uridylyl-transferase [Pseudomonas aeruginosa VRFPA01]
gi|452184717|gb|EME11735.1| PII uridylyl-transferase [Pseudomonas aeruginosa VRFPA01]
Length = 900
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 32/194 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + + I + + ++H + ++ +NL I+ A I+S + +D
Sbjct: 689 PLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDT 748
Query: 71 FNVIDCDGKKIRD----------------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG I + K DY IQ+R+ +FAP + S
Sbjct: 749 YIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIST 808
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ + + +E DRPGL + + + D +V NA+I T +R V ++TD +
Sbjct: 809 DAL--RQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITD-ARN 865
Query: 169 YAIKDP---KRLST 179
+ DP KRL
Sbjct: 866 QPLADPDLCKRLQA 879
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I + +V++V + ++ G+L ++ + D +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
++ A I++ G DVF + D + + D ++ +Q L
Sbjct: 841 SVQNAKIATLGERVEDVFYITDARNQPLADPDLCKRLQAAL 881
>gi|296387835|ref|ZP_06877310.1| PII uridylyl-transferase [Pseudomonas aeruginosa PAb1]
gi|416873843|ref|ZP_11917746.1| PII uridylyl-transferase [Pseudomonas aeruginosa 152504]
gi|334844257|gb|EGM22834.1| PII uridylyl-transferase [Pseudomonas aeruginosa 152504]
Length = 900
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 32/194 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + + I + + ++H + ++ +NL I+ A I+S + +D
Sbjct: 689 PLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDT 748
Query: 71 FNVIDCDGKKIRD----------------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG I + K DY IQ+R+ +FAP + S
Sbjct: 749 YIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIST 808
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ + + +E DRPGL + + + D +V NA+I T +R V ++TD +
Sbjct: 809 DAL--RQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITD-ARN 865
Query: 169 YAIKDP---KRLST 179
+ DP KRL
Sbjct: 866 QPLADPDLCKRLQA 879
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I + +V++V + ++ G+L ++ + D +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
++ A I++ G DVF + D + + D ++ +Q L
Sbjct: 841 SVQNAKIATLGERVEDVFYITDARNQPLADPDLCKRLQAAL 881
>gi|116051655|ref|YP_789506.1| PII uridylyl-transferase [Pseudomonas aeruginosa UCBPP-PA14]
gi|421173104|ref|ZP_15630858.1| PII uridylyl-transferase [Pseudomonas aeruginosa CI27]
gi|122260798|sp|Q02RD0.1|GLND_PSEAB RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|115586876|gb|ABJ12891.1| protein-P-II uridylyltransferase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|404536405|gb|EKA46045.1| PII uridylyl-transferase [Pseudomonas aeruginosa CI27]
Length = 900
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 32/194 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + + I + + ++H + ++ +NL I+ A I+S + +D
Sbjct: 689 PLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDT 748
Query: 71 FNVIDCDGKKIRD----------------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG I + K DY IQ+R+ +FAP + S
Sbjct: 749 YIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIST 808
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ + + +E DRPGL + + + D +V NA+I T +R V ++TD +
Sbjct: 809 DAL--RQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITD-ARN 865
Query: 169 YAIKDP---KRLST 179
+ DP KRL
Sbjct: 866 QPLADPDLCKRLQA 879
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I + +V++V + ++ G+L ++ + D +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
++ A I++ G DVF + D + + D ++ +Q L
Sbjct: 841 SVQNAKIATLGERVEDVFYITDARNQPLADPDLCKRLQAAL 881
>gi|313109063|ref|ZP_07795035.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa 39016]
gi|386067693|ref|YP_005982997.1| PII uridylyl-transferase [Pseudomonas aeruginosa NCGM2.S1]
gi|392982618|ref|YP_006481205.1| PII uridylyl-transferase [Pseudomonas aeruginosa DK2]
gi|419754750|ref|ZP_14281108.1| PII uridylyl-transferase [Pseudomonas aeruginosa PADK2_CF510]
gi|310881537|gb|EFQ40131.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa 39016]
gi|348036252|dbj|BAK91612.1| PII uridylyl-transferase [Pseudomonas aeruginosa NCGM2.S1]
gi|384398568|gb|EIE44973.1| PII uridylyl-transferase [Pseudomonas aeruginosa PADK2_CF510]
gi|392318123|gb|AFM63503.1| PII uridylyl-transferase [Pseudomonas aeruginosa DK2]
Length = 900
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 32/194 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + + I + + ++H + ++ +NL I+ A I+S + +D
Sbjct: 689 PLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDT 748
Query: 71 FNVIDCDGKKIRD----------------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG I + K DY IQ+R+ +FAP + S
Sbjct: 749 YIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIST 808
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ + + +E DRPGL + + + D +V NA+I T +R V ++TD +
Sbjct: 809 DAL--RQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITD-ARN 865
Query: 169 YAIKDP---KRLST 179
+ DP KRL
Sbjct: 866 QPLADPDLCKRLQA 879
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I + +V++V + ++ G+L ++ + D +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
++ A I++ G DVF + D + + D ++ +Q L
Sbjct: 841 SVQNAKIATLGERVEDVFYITDARNQPLADPDLCKRLQAAL 881
>gi|227820619|ref|YP_002824589.1| PII uridylyl-transferase [Sinorhizobium fredii NGR234]
gi|227339618|gb|ACP23836.1| [Protein-PII] uridylyltransferase [Sinorhizobium fredii NGR234]
Length = 965
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I N TVI+V+ +++ G+L ++ VL+D++L I A+I++ G +D F V
Sbjct: 847 PEVTISNTLSNKFTVIEVEGLDRTGLLSEITAVLSDLSLDIASAHITTFGEKVIDTFYVT 906
Query: 75 DCDGKKIRDKEVIDYIQQRLET 96
D G KI ++ I RL+
Sbjct: 907 DLVGAKITNENRQGNIAARLKA 928
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 5/130 (3%)
Query: 78 GKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVL 137
G+K R EVI + + +F + ++ + + T IE G DR GL SE+ AVL
Sbjct: 822 GRK-RLPEVIASRTRAKKRSKAFTVTPEVTISNTLSNKFTVIEVEGLDRTGLLSEITAVL 880
Query: 138 ADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKA 197
+DL ++ +A I T ++ +VTD G I + R I L VL G D +
Sbjct: 881 SDLSLDIASAHITTFGEKVIDTFYVTD-LVGAKITNENRQGNIAARLKAVLAGEVDEARE 939
Query: 198 KTSLSPPGIM 207
+ P GI+
Sbjct: 940 RM---PSGII 946
>gi|384248969|gb|EIE22452.1| glycoside hydrolase [Coccomyxa subellipsoidea C-169]
Length = 938
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 56/115 (48%), Gaps = 7/115 (6%)
Query: 19 IDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVIDCD 77
DNNT DATV+ + ++H +LL++ LN + L + A I SSD G +DVF V + +
Sbjct: 99 FDNNTDPDATVVTITGPDQHNLLLRLTAALNSMGLNVVSASISSSDDGTVLDVFRVTNSE 158
Query: 78 GKKIRDKEVIDYIQQRLETDASFAPSLRSS----VGVMPTEEHTSIEFTGTDRPG 128
+K+ + + LE A A S RSS G P E G+ R G
Sbjct: 159 DQKVPEDSWDGVRESVLEMLA--ASSSRSSKPAIFGAAPAPEEQQRRPLGSAREG 211
>gi|389792807|ref|ZP_10195989.1| (protein-PII) uridylyltransferase [Rhodanobacter fulvus Jip2]
gi|388435671|gb|EIL92568.1| (protein-PII) uridylyltransferase [Rhodanobacter fulvus Jip2]
Length = 877
Score = 50.4 bits (119), Expect = 7e-04, Method: Composition-based stats.
Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 20/179 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V + + +T + V + ++ G+ V +L+ + + +A I SS G MD F +
Sbjct: 684 PLVAVHPMSVRGSTELFVCTPDRDGLFASVTAMLDRLRFSVMEARILSSPKGMAMDTFLL 743
Query: 74 IDCDGKK----IRDKEVIDYIQQRLETDASFAPSLRS------------SVGVMPTEEHT 117
++ D ++ +R +E+ +Q+ L PS RS + + T
Sbjct: 744 LEADSQQPANTVRAEELQQRLQRALTLSTGVQPSKRSMSRHQRHFQTAPKISFDDAGDRT 803
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST---GYAIKD 173
+ GTDRPGL + V V+ D V +A I T +R ++D G A++D
Sbjct: 804 QLALVGTDRPGLLAAVAQVILDAGARVHDARIATFGERVEDFFLLSDRHNAPLGPALRD 862
>gi|107103172|ref|ZP_01367090.1| hypothetical protein PaerPA_01004241 [Pseudomonas aeruginosa PACS2]
gi|218890117|ref|YP_002438981.1| PII uridylyl-transferase [Pseudomonas aeruginosa LESB58]
gi|416854831|ref|ZP_11911161.1| PII uridylyl-transferase [Pseudomonas aeruginosa 138244]
gi|420138143|ref|ZP_14646084.1| PII uridylyl-transferase [Pseudomonas aeruginosa CIG1]
gi|421158549|ref|ZP_15617797.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 25324]
gi|421179178|ref|ZP_15636774.1| PII uridylyl-transferase [Pseudomonas aeruginosa E2]
gi|424939528|ref|ZP_18355291.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa NCMG1179]
gi|226723946|sp|B7V7F5.1|GLND_PSEA8 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|218770340|emb|CAW26105.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa LESB58]
gi|334843580|gb|EGM22167.1| PII uridylyl-transferase [Pseudomonas aeruginosa 138244]
gi|346055974|dbj|GAA15857.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa NCMG1179]
gi|403249126|gb|EJY62641.1| PII uridylyl-transferase [Pseudomonas aeruginosa CIG1]
gi|404547421|gb|EKA56419.1| PII uridylyl-transferase [Pseudomonas aeruginosa E2]
gi|404549490|gb|EKA58348.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 25324]
gi|453047335|gb|EME95049.1| PII uridylyl-transferase [Pseudomonas aeruginosa PA21_ST175]
Length = 900
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 32/194 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + + I + + ++H + ++ +NL I+ A I+S + +D
Sbjct: 689 PLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDT 748
Query: 71 FNVIDCDGKKIRD----------------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG I + K DY IQ+R+ +FAP + S
Sbjct: 749 YIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIST 808
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ + + +E DRPGL + + + D +V NA+I T +R V ++TD +
Sbjct: 809 DAL--RQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITD-ARN 865
Query: 169 YAIKDP---KRLST 179
+ DP KRL
Sbjct: 866 QPLADPDLCKRLQA 879
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I + +V++V + ++ G+L ++ + D +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
++ A I++ G DVF + D + + D ++ +Q L
Sbjct: 841 SVQNAKIATLGERVEDVFYITDARNQPLADPDLCKRLQAAL 881
>gi|15598854|ref|NP_252348.1| PII uridylyl-transferase [Pseudomonas aeruginosa PAO1]
gi|254236571|ref|ZP_04929894.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa C3719]
gi|254242355|ref|ZP_04935677.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa 2192]
gi|355639998|ref|ZP_09051488.1| uridylyltransferase [Pseudomonas sp. 2_1_26]
gi|386057355|ref|YP_005973877.1| PII uridylyl-transferase [Pseudomonas aeruginosa M18]
gi|418586107|ref|ZP_13150153.1| PII uridylyl-transferase [Pseudomonas aeruginosa MPAO1/P1]
gi|418589465|ref|ZP_13153387.1| PII uridylyl-transferase [Pseudomonas aeruginosa MPAO1/P2]
gi|421152533|ref|ZP_15612113.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 14886]
gi|421166110|ref|ZP_15624378.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 700888]
gi|421518201|ref|ZP_15964875.1| PII uridylyl-transferase [Pseudomonas aeruginosa PAO579]
gi|451987762|ref|ZP_21935914.1| [Protein-PII] uridylyltransferase [Pseudomonas aeruginosa 18A]
gi|12230934|sp|Q9Z9H0.2|GLND_PSEAE RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|9949819|gb|AAG07046.1|AE004785_10 protein-PII uridylyltransferase [Pseudomonas aeruginosa PAO1]
gi|126168502|gb|EAZ54013.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa C3719]
gi|126195733|gb|EAZ59796.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa 2192]
gi|347303661|gb|AEO73775.1| PII uridylyl-transferase [Pseudomonas aeruginosa M18]
gi|354831518|gb|EHF15530.1| uridylyltransferase [Pseudomonas sp. 2_1_26]
gi|375043781|gb|EHS36397.1| PII uridylyl-transferase [Pseudomonas aeruginosa MPAO1/P1]
gi|375051699|gb|EHS44165.1| PII uridylyl-transferase [Pseudomonas aeruginosa MPAO1/P2]
gi|404347683|gb|EJZ74032.1| PII uridylyl-transferase [Pseudomonas aeruginosa PAO579]
gi|404525293|gb|EKA35569.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 14886]
gi|404539087|gb|EKA48592.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 700888]
gi|451754521|emb|CCQ88437.1| [Protein-PII] uridylyltransferase [Pseudomonas aeruginosa 18A]
Length = 900
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 32/194 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + + I + + ++H + ++ +NL I+ A I+S + +D
Sbjct: 689 PLVLIKETTQREFESGSQIFIYAADQHDFFAVTVAAMDQLNLSIQDARIITSTSQFTLDT 748
Query: 71 FNVIDCDGKKIRD----------------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG I + K DY IQ+R+ +FAP + S
Sbjct: 749 YIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVTIST 808
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ + + +E DRPGL + + + D +V NA+I T +R V ++TD +
Sbjct: 809 DAL--RQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITD-ARN 865
Query: 169 YAIKDP---KRLST 179
+ DP KRL
Sbjct: 866 QPLADPDLCKRLQA 879
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I + +V++V + ++ G+L ++ + D +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISTDALRQVSVLEVIAPDRPGLLARIGGIFLDFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
++ A I++ G DVF + D + + D ++ +Q L
Sbjct: 841 SVQNAKIATLGERVEDVFYITDARNQPLADPDLCKRLQAAL 881
>gi|182680031|ref|YP_001834177.1| PII uridylyl-transferase [Beijerinckia indica subsp. indica ATCC
9039]
gi|182635914|gb|ACB96688.1| UTP-GlnB uridylyltransferase, GlnD [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 953
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V IDN+ + TVI+V +++ G+L + ++L+ NL I A+I + G +DVF V
Sbjct: 853 PEVSIDNSLSSRFTVIEVSGLDRTGLLYDLTRILSKANLNIGSAHIVTFGERVVDVFYVT 912
Query: 75 DCDGKKI 81
D G KI
Sbjct: 913 DLHGAKI 919
>gi|299132879|ref|ZP_07026074.1| UTP-GlnB uridylyltransferase, GlnD [Afipia sp. 1NLS2]
gi|298593016|gb|EFI53216.1| UTP-GlnB uridylyltransferase, GlnD [Afipia sp. 1NLS2]
Length = 961
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
+T IE TG DRPGL ++ ++ L N+ +A + T +R V +VTD G I P
Sbjct: 880 YTVIEVTGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVTD-LMGAQITAPT 938
Query: 176 RLSTIKELLFNVLRGYDDFR 195
R + IK L ++L D R
Sbjct: 939 RQAAIKRALVHLLANPDTTR 958
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P VVI+N TVI+V +++ G+L Q+ ++ ++L I A++++ G DVF V
Sbjct: 868 PEVVINNQWSDVYTVIEVTGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVT 927
Query: 75 DCDGKKI 81
D G +I
Sbjct: 928 DLMGAQI 934
>gi|261211379|ref|ZP_05925667.1| [Protein-PII] uridylyltransferase [Vibrio sp. RC341]
gi|260839334|gb|EEX65960.1| [Protein-PII] uridylyltransferase [Vibrio sp. RC341]
Length = 876
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 86/183 (46%), Gaps = 18/183 (9%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
+ P V++ T + V + ++ + V+ L+ NL + A I +S G+ +D F
Sbjct: 677 SKPLVLLSKKATRGGTEVFVYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTF 736
Query: 72 NVIDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE-- 114
V+D +G+ I R + +I ++ LE A P +++ V +PT+
Sbjct: 737 MVLDQNGQAIEEDRHQALIRHLVHVLEDGRPTTLKARRIPRNLQHFKVKTQVDFLPTKSK 796
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+ T +E D PGL + V A A+L+ ++ A+I T +RA + +T+ +D
Sbjct: 797 KRTLMELVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTNSQGARLNEDE 856
Query: 175 KRL 177
++L
Sbjct: 857 EQL 859
>gi|307104916|gb|EFN53167.1| hypothetical protein CHLNCDRAFT_136962 [Chlorella variabilis]
Length = 262
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 35/209 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN-- 72
P V IDN + AT++ V+ ++ G LL I L + L I++A + SD V +
Sbjct: 46 PVVKIDNESDPFATIVSVEYGDRLGELLDTIASLKALGLNIRRAKLKSDREHKFYVTDMR 105
Query: 73 -----VIDCDGKKIRDKEVIDYIQQRLETDASFA---PSLRSSV---------------G 109
V ++IR + + +Q E+ A P+ R +V G
Sbjct: 106 TSEKVVRSAKLEEIRLTILQNLLQFHPESGEQLAWGTPAARQAVVTRDIDPTAPLGAKRG 165
Query: 110 VM--------PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH 161
+ PT H+ + DRPGL +++ VL D++ NVV+AE+ T A +
Sbjct: 166 ISTQIEVREHPTGTHSVLLVNTLDRPGLLTDIVRVLKDVNLNVVSAEVDTIGRNAMDRFN 225
Query: 162 VTDHSTGYAIKDPKRLSTIKELLFNVLRG 190
+T H G + DP T+ L + + +G
Sbjct: 226 ITYH--GEPLSDPMCQLTVNALQYYLSQG 252
>gi|325109443|ref|YP_004270511.1| UTP-GlnB uridylyltransferase, GlnD [Planctomyces brasiliensis DSM
5305]
gi|324969711|gb|ADY60489.1| UTP-GlnB uridylyltransferase, GlnD [Planctomyces brasiliensis DSM
5305]
Length = 888
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 48/79 (60%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDC 76
VVIDN+T + AT++ V + ++ G+L + + + D++L + A I++ +DVF V D
Sbjct: 794 VVIDNDTSSQATIVDVFAHDRAGLLFTISKAIYDLDLSVTLARITTHVDQVVDVFYVTDL 853
Query: 77 DGKKIRDKEVIDYIQQRLE 95
DG KI D+ I+ R++
Sbjct: 854 DGNKILDEYSRKAIRDRVQ 872
>gi|77457326|ref|YP_346831.1| PII uridylyl-transferase [Pseudomonas fluorescens Pf0-1]
gi|398976829|ref|ZP_10686639.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM25]
gi|91206750|sp|Q3KHB4.1|GLND_PSEPF RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|77381329|gb|ABA72842.1| uridylyltransferase [Pseudomonas fluorescens Pf0-1]
gi|398138712|gb|EJM27726.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM25]
Length = 900
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG K+IRD + DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPVRVKQIRDGLTEALRNPADYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E T DRPGL + V + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELTAPDRPGLLARVGGIFLEFDLSLQNAKIATLGERVEDVFFITD-AHN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 866 QPLSDPLLCSRLQDAIVEQL 885
>gi|390436901|ref|ZP_10225439.1| PII uridylyl-transferase [Pantoea agglomerans IG1]
Length = 884
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 20/167 (11%)
Query: 8 LIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGW 66
L+ + P V++ T I + S ++ + V L+ NL + A I +S G
Sbjct: 682 LVHDLKKPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGM 741
Query: 67 FMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDASFAP-------------SLRSSVGV 110
MD F V++ DG + R +I ++Q + T + +AP S+ + V
Sbjct: 742 AMDTFIVLEPDGSPLSPDRHPMIIQALEQAI-TQSEWAPPRTRRPSAKLRHFSVDTEVNF 800
Query: 111 MPT--EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+PT + + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 801 LPTHTDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGER 847
>gi|406833391|ref|ZP_11092985.1| protein-P-II uridylyltransferase [Schlesneria paludicola DSM 18645]
Length = 915
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P RVV+DN + TVI V + ++ G+L + + L + NL + A I++ +DVF V
Sbjct: 820 PMRVVVDNESSDRYTVIDVFAHDRPGLLYVITRTLYEQNLSVALAKIATHFDQVLDVFFV 879
Query: 74 IDCDGKKIRDKE 85
+ DG+K+RD E
Sbjct: 880 TESDGRKVRDGE 891
Score = 42.4 bits (98), Expect = 0.22, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 8/112 (7%)
Query: 93 RLETDASFAP----SLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAE 148
R A+ P +R V ++ +T I+ DRPGL + L + + +V A+
Sbjct: 806 RFSVHATSGPVSDLPMRVVVDNESSDRYTVIDVFAHDRPGLLYVITRTLYEQNLSVALAK 865
Query: 149 IWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTS 200
I TH D+ V VT+ S G ++D +RL ++++ L L+ DF K+ +
Sbjct: 866 IATHFDQVLDVFFVTE-SDGRKVRDGERLKSLRDFLTLQLQ---DFEKSAAT 913
>gi|404317041|ref|ZP_10964974.1| PII uridylyl-transferase [Ochrobactrum anthropi CTS-325]
Length = 934
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 99 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 158
+F R + + + T IE G DRPGL SE+ +++DL ++ +A I T ++
Sbjct: 829 AFKVEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVID 888
Query: 159 VVHVTDHSTGYAIKDPKRLSTIKELLFNVLRG 190
+VTD G+ I + R I+ L VL G
Sbjct: 889 SFYVTD-LVGHKISNATRQGNIRRKLLGVLSG 919
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIRRKL 913
>gi|153007502|ref|YP_001368717.1| PII uridylyl-transferase [Ochrobactrum anthropi ATCC 49188]
gi|166232253|sp|A6WV84.1|GLND_OCHA4 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|151559390|gb|ABS12888.1| metal dependent phosphohydrolase [Ochrobactrum anthropi ATCC 49188]
Length = 934
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I + R
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKISNATR 905
Query: 177 LSTIKELLFNVLRG 190
I+ L VL G
Sbjct: 906 QGNIRRKLLGVLSG 919
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIRRKL 913
>gi|149190035|ref|ZP_01868312.1| PII uridylyl-transferase [Vibrio shilonii AK1]
gi|148836065|gb|EDL53025.1| PII uridylyl-transferase [Vibrio shilonii AK1]
Length = 874
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 18/172 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ N T + V ++ + V+ L+ N + A I +S G+ +D F V
Sbjct: 679 PLVLMSKNATRGGTEVFVYCQDQPALFATVVAELDRRNFNVHDAQIMTSKDGFVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQRLE------TDASFAP------SLRSSVGVMPTE--EH 116
+D G I R VI ++ LE AP ++++ V +PT+ +
Sbjct: 739 LDQHGDAIDVERHSAVIKHLVHVLEDGRPTRVKTRRAPRNLKHFNVKTQVDFLPTKGKKR 798
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E D PGL ++V A A L N+ A+I T +RA + +T + G
Sbjct: 799 TLMELVALDAPGLLAKVGATFAQLGVNLHAAKITTIGERAEDLFILTSATGG 850
>gi|403713835|ref|ZP_10939894.1| PII uridylyltransferase [Kineosphaera limosa NBRC 100340]
gi|403211941|dbj|GAB94577.1| PII uridylyltransferase [Kineosphaera limosa NBRC 100340]
Length = 792
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 15/154 (9%)
Query: 25 ADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDK 84
D +++V + ++ G+ VL L +++A +S+D G +D ++V G + D+
Sbjct: 615 GDGQLVEVVAPDRVGLFADTAGVLAAHGLSVRRARLSTDDGIAIDHWHVESPSGARA-DR 673
Query: 85 EVIDYIQQRLETD--ASFAPSLRSSVGV----------MP--TEEHTSIEFTGTDRPGLF 130
E ++ RL + AP R V V +P + T +E TDRPGL
Sbjct: 674 EALERAMLRLRSGDRRGLAPLSRRPVPVPDAPVTRALLVPDAAADATVLELRATDRPGLL 733
Query: 131 SEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+V LA L +V +A + T+ +A V++T+
Sbjct: 734 HDVGRCLAQLTVSVRSAHVATYCGQAVDTVYLTE 767
>gi|409435802|ref|ZP_11263010.1| (Protein-PII) uridylyltransferase [Rhizobium mesoamericanum
STM3625]
gi|408752560|emb|CCM74157.1| (Protein-PII) uridylyltransferase [Rhizobium mesoamericanum
STM3625]
Length = 969
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 849 PPSVNISNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 908
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G+KI I RL+
Sbjct: 909 TDLVGQKISGDSKRSNITARLKA 931
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD D KR
Sbjct: 863 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISGDSKR 922
Query: 177 LSTIKELLFNVLRGYDDFRKAKTS--LSPP 204
+ L + D+ R+ S ++PP
Sbjct: 923 SNITARLKAVMAEEQDELRERMPSGIIAPP 952
>gi|372276073|ref|ZP_09512109.1| PII uridylyl-transferase [Pantoea sp. SL1_M5]
Length = 884
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 20/167 (11%)
Query: 8 LIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGW 66
L+ + P V++ T I + S ++ + V L+ NL + A I +S G
Sbjct: 682 LVHDLKKPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGM 741
Query: 67 FMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDASFAP-------------SLRSSVGV 110
MD F V++ DG + R +I ++Q + T + +AP S+ + V
Sbjct: 742 AMDTFIVLEPDGSPLSPDRHPMIIQALEQAI-TQSEWAPPRTRRPSAKLRHFSVDTEVNF 800
Query: 111 MPT--EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+PT + + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 801 LPTHTDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGER 847
>gi|254417899|ref|ZP_05031623.1| protein-P-II uridylyltransferase [Brevundimonas sp. BAL3]
gi|196184076|gb|EDX79052.1| protein-P-II uridylyltransferase [Brevundimonas sp. BAL3]
Length = 900
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 46/184 (25%), Positives = 87/184 (47%), Gaps = 23/184 (12%)
Query: 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG-GWFMDVFNVIDCDG------K 79
AT I + + ++ G+ + Q + + + A +++ G +DVF V D G +
Sbjct: 677 ATEISIAAADRPGLFADLAQTMAALGADVTDARVATTSEGVVLDVFRVQDGAGLPYGQAE 736
Query: 80 KIRDKEVIDYIQQ--RLETDASFAPS-----LRSSVGVMP--------TEEHTSIEFTGT 124
R K ++D +++ R E S AP+ +++ V P +E T +E +G
Sbjct: 737 PRRLKALVDALEKAARGEGRISKAPAPAGNARKAAFEVRPVVMVDHHASETATVVEVSGA 796
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
DRPGL + + V +D N+ +A + ++ +RA +V D G I +R++ ++ L
Sbjct: 797 DRPGLLAALSRVFSDEGLNIRSAHVASYGERAVDSFYVVD-GKGRKITSEQRIAELRTAL 855
Query: 185 FNVL 188
VL
Sbjct: 856 EAVL 859
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 49/81 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V++D++ ATV++V ++ G+L + +V +D L I+ A+++S G +D F V+
Sbjct: 776 PVVMVDHHASETATVVEVSGADRPGLLAALSRVFSDEGLNIRSAHVASYGERAVDSFYVV 835
Query: 75 DCDGKKIRDKEVIDYIQQRLE 95
D G+KI ++ I ++ LE
Sbjct: 836 DGKGRKITSEQRIAELRTALE 856
>gi|104783197|ref|YP_609695.1| PII uridylyl-transferase [Pseudomonas entomophila L48]
gi|122402173|sp|Q1I624.1|GLND_PSEE4 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|95112184|emb|CAK16911.1| putative [Protein-PII] uridylyltransferase (PII
uridylyl-transferase) (Uridylyl removing enzyme) (UTase)
[Pseudomonas entomophila L48]
Length = 900
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 86/200 (43%), Gaps = 25/200 (12%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + + +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMAQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVIDYIQQRLETDASFAPSLR-------------SSVGVMP 112
+ V+D DG I D K++ D + + L T + ++ V ++
Sbjct: 749 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRTPEDYPAIIQRRVPRQLKHFDFPPQVTILN 808
Query: 113 TEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPVTILEITAPDRPGLLARIGRIFLEFDISLQNAKIATLGERVEDVFFITD-ADNQP 867
Query: 171 IKDPKRLSTIKELLFNVLRG 190
+ DP+ S ++E + L+
Sbjct: 868 LSDPQLCSRLQEAIIQQLQA 887
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 46/79 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+ T++++ + ++ G+L ++ ++ + ++ ++ A I++ G DVF +
Sbjct: 801 PPQVTILNDAQRPVTILEITAPDRPGLLARIGRIFLEFDISLQNAKIATLGERVEDVFFI 860
Query: 74 IDCDGKKIRDKEVIDYIQQ 92
D D + + D ++ +Q+
Sbjct: 861 TDADNQPLSDPQLCSRLQE 879
>gi|407070690|ref|ZP_11101528.1| PII uridylyl-transferase [Vibrio cyclitrophicus ZF14]
Length = 873
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 20/181 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS-SDG 64
L+R +P P V+I T + V ++ + V+ L+ N + A + S
Sbjct: 670 LLRLEDPSQPLVLISKKATRGGTEVFVYCKDQAALFATVVAELDRRNFNVHDAQVMVSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRL------ETDASFAP------SLRSSVG 109
G +D F V+D GK I R K V ++ L + P +++ V
Sbjct: 730 GHVLDTFIVLDQHGKAIDEARHKAVAKHLVHVLADGRPTKIKTRRTPRNLQHFKVKTLVE 789
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ +HT +E D PGL +EV A A+L N+ A+I T +RA + +T +
Sbjct: 790 FLPTKSKKHTLMELRALDTPGLLAEVGATFAELDINLHGAKITTIGERAEDLFILTSDAG 849
Query: 168 G 168
G
Sbjct: 850 G 850
>gi|421082948|ref|ZP_15543827.1| Protein-P-II uridylyltransferase [Pectobacterium wasabiae CFBP
3304]
gi|401702174|gb|EJS92418.1| Protein-P-II uridylyltransferase [Pectobacterium wasabiae CFBP
3304]
Length = 903
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 87/191 (45%), Gaps = 23/191 (12%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
N P V+I + T I + S ++ + V L+ NL + A I +S G MD F
Sbjct: 703 NKPLVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTF 762
Query: 72 NVIDCDGKKI-RDKEVIDYIQQRLETDASF-----------APSLR-----SSVGVMPT- 113
V++ DG + +D+ + I+Q LE + +P LR + V +PT
Sbjct: 763 IVLEPDGSPLAQDRH--EMIRQALEQSLTHRHYQHPRVRRPSPKLRHFSVPTEVNFLPTH 820
Query: 114 -EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ + +E + D+PGL + + + ADL+ ++ A I T +R + + D S A+K
Sbjct: 821 TDRRSYMELSALDQPGLLARIGEIFADLNLSLHGARISTIGERVEDLFILAD-SDRRALK 879
Query: 173 DPKRLSTIKEL 183
RL + L
Sbjct: 880 PDLRLKLQERL 890
>gi|260772220|ref|ZP_05881136.1| [Protein-PII] uridylyltransferase [Vibrio metschnikovii CIP 69.14]
gi|260611359|gb|EEX36562.1| [Protein-PII] uridylyltransferase [Vibrio metschnikovii CIP 69.14]
Length = 881
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 93/194 (47%), Gaps = 24/194 (12%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V+I T + V + ++ + V+ L+ NL + A I +S G+ +D F V
Sbjct: 679 PLVLISKKATRGGTEVFVYTKDQPALFATVVAELDRRNLNVHDAQIMTSKDGYVLDTFMV 738
Query: 74 IDCDGKKI---RDKEVIDYIQQ--------RLETD------ASFAPSLRSSVGVMPTE-- 114
+D +G+ I R +I ++ RL+T F ++R+ V +PT+
Sbjct: 739 LDHNGQAIEENRHHALIKHLTHVLTDGRPTRLKTRRIPRNLQHF--TVRTQVDFLPTKSK 796
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+ T +E D PGL + + A A+L+ ++ A+I T +RA + +T+ G + D
Sbjct: 797 KRTLMELVALDTPGLLATIGATFAELNLDLHGAKITTLGERAEDLFILTNQQ-GAKLTDQ 855
Query: 175 KRLSTIKELLFNVL 188
++ + ++E L + +
Sbjct: 856 EQ-NALRERLIDTI 868
>gi|430001964|emb|CCF17744.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Rhizobium sp.]
Length = 946
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V++ N TV++V+ +++ G+L ++ VL D++L I A I++ G +D F V
Sbjct: 825 PPSVILSNGLSNKFTVVEVECLDRPGLLAEITAVLADLSLDIHSARITTFGEKVIDTFYV 884
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G KI ++ I RL+
Sbjct: 885 TDLLGTKITNENRQGNISARLKA 907
Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 102 PSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH 161
PS+ S G+ + + T +E DRPGL +E+ AVLADL ++ +A I T ++ +
Sbjct: 826 PSVILSNGL--SNKFTVVEVECLDRPGLLAEITAVLADLSLDIHSARITTFGEKVIDTFY 883
Query: 162 VTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
VTD G I + R I L V+ +D + S P GI+
Sbjct: 884 VTD-LLGTKITNENRQGNISARLKAVMAEQEDELR---SGMPSGII 925
>gi|56459955|ref|YP_155236.1| UTP:GlnB (protein PII) uridylyltransferase [Idiomarina loihiensis
L2TR]
gi|81170618|sp|Q5QXT0.1|GLND_IDILO RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|56178965|gb|AAV81687.1| UTP:GlnB (protein PII) uridylyltransferase [Idiomarina loihiensis
L2TR]
Length = 879
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 91/193 (47%), Gaps = 22/193 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P ++I + T + + + + V VL+ L I A I ++ G+ MD F V
Sbjct: 687 PLILIGDENNYGTTELFIYHHEEGHLFASVAGVLDSQQLNILDAQILATRDGFVMDTFVV 746
Query: 74 IDCDGKKIRD--------KEVIDYIQQRLETDASFAP--------SLRSSVGVMPTEEH- 116
+ DGK + + ++++D + +R+ ++ P S+ + V +P++ H
Sbjct: 747 LQRDGKPLTEPHRIEEVKQQLLDVLHKRIPVPSTKRPLSRRMKNFSVATEVTFIPSKHHG 806
Query: 117 -TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHV-TDHSTGYAIKDP 174
T+ E DRPGL +++ A+L + ++ A+I T ++A + V T+ T + K
Sbjct: 807 RTTFELVTLDRPGLIAKLAAILQQQNVILLAAKITTIGEQAEDLFIVTTEQQTALSDKQK 866
Query: 175 KRLST--IKELLF 185
K L IK+L F
Sbjct: 867 KTLKAKIIKDLEF 879
>gi|405377530|ref|ZP_11031471.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF142]
gi|397325967|gb|EJJ30291.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF142]
Length = 963
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVAITNSLSNKFTVIEVECLDRPGLLSEMTAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 908 TDLVGQKI 915
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD D KR
Sbjct: 862 TVIEVECLDRPGLLSEMTAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISGDSKR 921
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
+ + + D+ R+ P GI+
Sbjct: 922 ANITARMKAVMAEEQDELRER----MPSGII 948
>gi|402824693|ref|ZP_10874039.1| PII uridylyl-transferase [Sphingomonas sp. LH128]
gi|402261772|gb|EJU11789.1| PII uridylyl-transferase [Sphingomonas sp. LH128]
Length = 917
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV+ DN TV+++++ ++ +L ++ L + L++ A+I++ G D F V
Sbjct: 824 PRVLFDNKASNRFTVVEINARDRPALLNRLAHALFESKLMVHSAHIATYGERAADTFYVT 883
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVG 109
D G+KI I I++RL +A+ PSL +V
Sbjct: 884 DLLGEKITAAPRIKAIERRL-LEATSEPSLEEAVA 917
>gi|399035066|ref|ZP_10732590.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF122]
gi|398067164|gb|EJL58707.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF122]
Length = 969
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 849 PPSVNISNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 908
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G+KI I RL+
Sbjct: 909 TDLVGQKISGDSKRSNITARLKA 931
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD D KR
Sbjct: 863 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISGDSKR 922
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
+ L + D+ R+ P GI+
Sbjct: 923 SNITARLKAVMAEEQDELRERM----PSGII 949
>gi|418296832|ref|ZP_12908675.1| PII uridylyl-transferase [Agrobacterium tumefaciens CCNWGS0286]
gi|355539007|gb|EHH08249.1| PII uridylyl-transferase [Agrobacterium tumefaciens CCNWGS0286]
Length = 942
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V+I N TVI+V+ +++ G+L + V+ D++L I A I++ G +D F V
Sbjct: 826 PPSVIISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYV 885
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G+K+ + I QRL+
Sbjct: 886 TDLFGQKVTNDNRQASIAQRLKA 908
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 92 QRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 151
+R ++ + PS+ S G+ + + T IE DRPGL +++ AV+ADL ++ +A I T
Sbjct: 817 RRKKSAFTIPPSVIISNGL--SNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITT 874
Query: 152 HNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDD 193
++ +VTD G + + R ++I + L V+ +D
Sbjct: 875 FGEKVIDTFYVTD-LFGQKVTNDNRQASIAQRLKAVMSEQED 915
>gi|424915802|ref|ZP_18339166.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|392851978|gb|EJB04499.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 968
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 908 TDLVGQKI 915
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD
Sbjct: 862 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTD 909
>gi|424888942|ref|ZP_18312545.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2012]
gi|393174491|gb|EJC74535.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2012]
Length = 968
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 908 TDLVGQKI 915
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD D KR
Sbjct: 862 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISGDSKR 921
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
+ + + D+ R+ P GI+
Sbjct: 922 ANITARMKAVMAEEEDELRERM----PSGII 948
>gi|407695749|ref|YP_006820537.1| protein-P-II uridylyltransferase [Alcanivorax dieselolei B5]
gi|407253087|gb|AFT70194.1| Protein-P-II uridylyltransferase [Alcanivorax dieselolei B5]
Length = 902
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 46/81 (56%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P +VVI N+ D TV+ + ++++ G+L + ++ L+++ A I++ G DVF V
Sbjct: 805 PTQVVISNDIVNDRTVVDIHTLDRPGLLAHIGRIFVQFELLVQNARIATLGERVEDVFFV 864
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D +G + D E+ ++Q L
Sbjct: 865 TDLNGDPVSDPELCQHLQDTL 885
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 83/209 (39%), Gaps = 29/209 (13%)
Query: 8 LIRRMNP--PRVVIDNNTCADATV-----IKVDSVNKHGILLQVIQVLNDVNLVIKKA-Y 59
L+ R NP P V+I N I + + + + + L+ + L I A
Sbjct: 682 LLGRPNPEDPLVLIRENQMGQGQTEGGSQIFIYTPDTQNLFAATVNALDSLGLTIMDARI 741
Query: 60 ISSDGGWFMDVFNVIDCDGKKIRDK-EVIDYIQQRLETDASFAPSLRSSVGV-------- 110
I+S G+ +D + V+D G I D I++I+Q L ++V
Sbjct: 742 ITSADGFSLDTYIVLDEHGTPIGDDWPRIEHIRQTLTETLKHPEKFGTTVSRRMPRRHKH 801
Query: 111 --MPTE---------EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAV 159
+PT+ + T ++ DRPGL + + + V NA I T +R V
Sbjct: 802 FDVPTQVVISNDIVNDRTVVDIHTLDRPGLLAHIGRIFVQFELLVQNARIATLGERVEDV 861
Query: 160 VHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
VTD G + DP+ +++ L L
Sbjct: 862 FFVTD-LNGDPVSDPELCQHLQDTLMQEL 889
>gi|209547642|ref|YP_002279559.1| PII uridylyl-transferase [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209533398|gb|ACI53333.1| UTP-GlnB uridylyltransferase, GlnD [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 968
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 908 TDLVGQKI 915
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD
Sbjct: 862 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTD 909
>gi|407791701|ref|ZP_11138781.1| PII uridylyl-transferase [Gallaecimonas xiamenensis 3-C-1]
gi|407199178|gb|EKE69199.1| PII uridylyl-transferase [Gallaecimonas xiamenensis 3-C-1]
Length = 856
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 46/189 (24%), Positives = 80/189 (42%), Gaps = 37/189 (19%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V + +T T + V + ++ + + VL+ NL I A + +S GW +D V
Sbjct: 665 PLVKLSKHTTRGGTELFVYTRDRAQLFACIASVLDGKNLSINDAQVMTSKDGWALDSLVV 724
Query: 74 IDCDGKKIRDKEVIDYIQQRLE--------------------------TDASFAPSLRSS 107
++ DG + + ++ +E TD +F PS R
Sbjct: 725 VERDGSPVESPSRVQSTRRAIEKALLQAKFPKPVQRPLPRQLKPFQVSTDVTFLPSSR-- 782
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+ T +EFT DRPGL ++V V A+ ++ A+I T +RA +T +
Sbjct: 783 -------KQTLVEFTALDRPGLLAQVGQVFAEQDISLKAAKITTIGERAEDFFILTTMA- 834
Query: 168 GYAIKDPKR 176
G A+ D ++
Sbjct: 835 GEALTDQQQ 843
>gi|424879748|ref|ZP_18303380.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WU95]
gi|392516111|gb|EIW40843.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WU95]
Length = 968
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 908 TDLVGQKI 915
Score = 43.5 bits (101), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD D KR
Sbjct: 862 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISGDSKR 921
Query: 177 LSTIKELLFNVLRGYDDFRK---------AKTSLSPPG 205
+ + + D+ R+ A T+ +PP
Sbjct: 922 ANITARMKAVMAEEEDELRERMPSGIIAPAATARTPPA 959
>gi|417110224|ref|ZP_11963559.1| [protein-PII] uridylyltransferase protein [Rhizobium etli CNPAF512]
gi|327188578|gb|EGE55788.1| [protein-PII] uridylyltransferase protein [Rhizobium etli CNPAF512]
Length = 968
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 908 TDLVGQKI 915
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD
Sbjct: 862 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTD 909
>gi|312113912|ref|YP_004011508.1| UTP-GlnB uridylyltransferase, GlnD [Rhodomicrobium vannielii ATCC
17100]
gi|311219041|gb|ADP70409.1| UTP-GlnB uridylyltransferase, GlnD [Rhodomicrobium vannielii ATCC
17100]
Length = 917
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 43/71 (60%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP +VIDN + TVI+V ++++ G+L + + +D+ L I A+I++ G +DVF V
Sbjct: 831 PPDIVIDNTASQETTVIEVHALDRPGLLYDLARCFDDLGLDIASAHIATFGEKAVDVFYV 890
Query: 74 IDCDGKKIRDK 84
+K+ D+
Sbjct: 891 TGPGKQKVTDE 901
>gi|224109552|ref|XP_002315234.1| predicted protein [Populus trichocarpa]
gi|222864274|gb|EEF01405.1| predicted protein [Populus trichocarpa]
Length = 423
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 7/142 (4%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD--GGWFMDVFNVI 74
V +DN T++++ V++ G+ ++++ D+N+ + SS G MD+F V
Sbjct: 243 VTVDNLLSPAHTLLQIQCVDQKGLFYDILRISKDLNIQVAYGRFSSSIKGYRNMDLF-VQ 301
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFS 131
DGKKI D +++D + RL+ + P P E +E G RP +F
Sbjct: 302 QTDGKKILDPKLLDNLCSRLKEEM-LHPLRVIITNRGPDTELLVANPVELCGKGRPRVFY 360
Query: 132 EVCAVLADLHCNVVNAEIWTHN 153
+V L L + +AEI H+
Sbjct: 361 DVTLALKKLGICIFSAEIGRHS 382
Score = 37.0 bits (84), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 77/192 (40%), Gaps = 32/192 (16%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI-- 74
++ N+ D T++ V+ +K G+ + +++ + L I +A +DG W V V+
Sbjct: 10 LIQQGNSPHDPTIVTVNCPDKSGLGCDLCRIILEFGLHITRADFQTDGKWCYIVLWVVQL 69
Query: 75 --------DCDGKKIRDKEVID------YIQQRLETDASFAPSLRSSVGVMPTEEHTSIE 120
D D K R V Y Q+L +S APS+ ++
Sbjct: 70 QHSNLLRLDWDSLKNRLLRVSPPCLTPLYYDQKL-NGSSAAPSV------------YLLK 116
Query: 121 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPKRLST 179
F DR GL +V VL +L + ++ T D + + +TD K KR
Sbjct: 117 FCCVDRKGLLHDVTEVLTELEFTIQRLKVMTTPDGKVVDLFFITDGRELLHTK--KRRDD 174
Query: 180 IKELLFNVLRGY 191
L++V R Y
Sbjct: 175 TCRYLYDVFREY 186
>gi|116250174|ref|YP_766012.1| PII uridylyl-transferase [Rhizobium leguminosarum bv. viciae 3841]
gi|6572661|gb|AAF17352.1|AF155830_1 putative uridylyltransferase/uridylyl-removing enzyme [Rhizobium
leguminosarum bv. viciae]
gi|115254822|emb|CAK05896.1| putative [Protein-PII] uridylyltransferase [Rhizobium leguminosarum
bv. viciae 3841]
Length = 968
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 908 TDLVGQKI 915
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD D KR
Sbjct: 862 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISGDSKR 921
Query: 177 LSTIKELLFNVLRGYDDFRK---------AKTSLSPPG 205
+ + + D+ R+ A T+ +PP
Sbjct: 922 ANITARMKAVMAEEEDELRERMPSGIIAPAATARTPPA 959
>gi|227114685|ref|ZP_03828341.1| PII uridylyl-transferase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 937
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 19/190 (10%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P V+I + T I + S ++ + V L+ NL + A I +S G MD
Sbjct: 736 VNKPLVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 795
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASF--------APSLR-----SSVGVMPT-- 113
F V++ DG + E+I + ++ T + +P LR + V +PT
Sbjct: 796 FIVLEPDGSPLAQDRHEMIRHALEQALTHRHYQHPRVRRPSPKLRHFSVPTEVNFLPTHT 855
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
+ + +E + D+PGL + + + ADL+ ++ A I T +R + + D S A+K
Sbjct: 856 DRRSYMELSALDQPGLLARIGEIFADLNLSLHGARISTIGERVEDLFILAD-SDRRALKP 914
Query: 174 PKRLSTIKEL 183
RL + L
Sbjct: 915 DLRLKLQERL 924
>gi|255556900|ref|XP_002519483.1| amino acid binding protein, putative [Ricinus communis]
gi|223541346|gb|EEF42897.1| amino acid binding protein, putative [Ricinus communis]
Length = 409
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 14/184 (7%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDVFNVI 74
V +DN+ T++++ + G+L +++ L D N+ I + I +D+F ++
Sbjct: 232 VTMDNSLSPGHTLVQIACQDHKGLLYDIMRTLKDYNIKISYGRFSIKQRRNCEIDLF-IV 290
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFS 131
DGKKI D + RLE + P + V P E +E +G RP +F
Sbjct: 291 QADGKKIVDPSKQGALCSRLEMEL-LRPLRVAVVSRGPDIELLVANPVELSGNGRPLVFH 349
Query: 132 EVCAVLADLHCNVVNAEI--WTHNDRAAAVVHV-TDHSTGYAIKDPKRLSTIKELLFNVL 188
++ L L + +AEI DR V V D G ++ P+ S I+E ++N+L
Sbjct: 350 DITLALKMLSTGIFSAEIRRCMIGDREYEVYRVLLDEGEGLSV--PR--SKIQERVWNML 405
Query: 189 RGYD 192
G+D
Sbjct: 406 MGWD 409
>gi|424898000|ref|ZP_18321574.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|393182227|gb|EJC82266.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2297]
Length = 968
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 908 TDLVGQKI 915
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD
Sbjct: 862 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTD 909
>gi|15964149|ref|NP_384502.1| PII uridylyl-transferase [Sinorhizobium meliloti 1021]
gi|334314799|ref|YP_004547418.1| UTP-GlnB uridylyltransferase GlnD [Sinorhizobium meliloti AK83]
gi|384528136|ref|YP_005712224.1| UTP-GlnB uridylyltransferase, GlnD [Sinorhizobium meliloti BL225C]
gi|384534494|ref|YP_005718579.1| protein GlnD [Sinorhizobium meliloti SM11]
gi|407719238|ref|YP_006838900.1| PII uridylyl-transferase [Sinorhizobium meliloti Rm41]
gi|418400279|ref|ZP_12973821.1| PII uridylyl-transferase [Sinorhizobium meliloti CCNWSX0020]
gi|433612182|ref|YP_007188980.1| [Protein-PII] uridylyltransferase [Sinorhizobium meliloti GR4]
gi|7387710|sp|P56884.1|GLND_RHIME RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|7188745|gb|AAF37852.1|AF227730_2 uridylyltransferase [Sinorhizobium meliloti]
gi|15073325|emb|CAC41833.1| Protein-PII uridylyltransferase [Sinorhizobium meliloti 1021]
gi|333810312|gb|AEG02981.1| UTP-GlnB uridylyltransferase, GlnD [Sinorhizobium meliloti BL225C]
gi|334093793|gb|AEG51804.1| UTP-GlnB uridylyltransferase, GlnD [Sinorhizobium meliloti AK83]
gi|336031386|gb|AEH77318.1| GlnD [Sinorhizobium meliloti SM11]
gi|359505748|gb|EHK78268.1| PII uridylyl-transferase [Sinorhizobium meliloti CCNWSX0020]
gi|407317470|emb|CCM66074.1| PII uridylyl-transferase [Sinorhizobium meliloti Rm41]
gi|429550372|gb|AGA05381.1| [Protein-PII] uridylyltransferase [Sinorhizobium meliloti GR4]
Length = 949
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I N TVI+V+ +++ G+L +V VL+D++L I A+I++ G +D F V
Sbjct: 831 PEVTISNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVT 890
Query: 75 DCDGKKI 81
D G KI
Sbjct: 891 DLVGSKI 897
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE G DR GL SEV AVL+DL ++ +A I T ++ +VTD G I R
Sbjct: 844 TVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTD-LVGSKITSENR 902
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
I L VL G D + + P GI+
Sbjct: 903 QMNIAARLKAVLAGEVDEARERM---PSGII 930
>gi|424873391|ref|ZP_18297053.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
viciae WSM1455]
gi|393169092|gb|EJC69139.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
viciae WSM1455]
Length = 968
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 908 TDLVGQKI 915
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD D KR
Sbjct: 862 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISGDSKR 921
Query: 177 LSTIKELLFNVLRGYDDFRK---------AKTSLSPPG 205
+ + + D+ R+ A T+ +PP
Sbjct: 922 ANITARMRAVMAEEEDELRERMPSGIIAPAATARTPPA 959
>gi|190890057|ref|YP_001976599.1| PII uridylyl-transferase [Rhizobium etli CIAT 652]
gi|190695336|gb|ACE89421.1| [protein-PII] uridylyltransferase protein [Rhizobium etli CIAT 652]
Length = 968
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 908 TDLVGQKI 915
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD
Sbjct: 862 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTD 909
>gi|402490590|ref|ZP_10837379.1| PII uridylyl-transferase [Rhizobium sp. CCGE 510]
gi|401810616|gb|EJT02989.1| PII uridylyl-transferase [Rhizobium sp. CCGE 510]
Length = 968
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 908 TDLVGQKI 915
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD
Sbjct: 862 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTD 909
>gi|421588176|ref|ZP_16033492.1| PII uridylyl-transferase, partial [Rhizobium sp. Pop5]
gi|403707146|gb|EJZ22223.1| PII uridylyl-transferase, partial [Rhizobium sp. Pop5]
Length = 899
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 779 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 838
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 839 TDLVGQKI 846
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD D KR
Sbjct: 793 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISGDSKR 852
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
+ L + D+ R+ P GI+
Sbjct: 853 ANITARLKAVMAEEEDELRERM----PSGII 879
>gi|241202799|ref|YP_002973895.1| PII uridylyl-transferase [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240856689|gb|ACS54356.1| UTP-GlnB uridylyltransferase, GlnD [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 968
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 848 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 907
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 908 TDLVGQKI 915
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD
Sbjct: 862 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTD 909
>gi|218508896|ref|ZP_03506774.1| PII uridylyl-transferase [Rhizobium etli Brasil 5]
Length = 227
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 108 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 167
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 168 TDLVGQKI 175
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 9/98 (9%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD D KR
Sbjct: 122 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISGDSKR 181
Query: 177 LSTIKELLFNVLRGYDDFRK---------AKTSLSPPG 205
+ + + D+ R+ A T SPP
Sbjct: 182 ANITARMKAVMAEEEDELRERMPSGIIAPAATRTSPPA 219
>gi|83945035|ref|ZP_00957401.1| PII uridylyl-transferase [Oceanicaulis sp. HTCC2633]
gi|83851817|gb|EAP89672.1| PII uridylyl-transferase [Oceanicaulis sp. HTCC2633]
Length = 938
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 32/194 (16%)
Query: 27 ATVIKVDSVNKHGILLQVIQVLN--DVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDK 84
AT + V + ++H + + L+ N+V + +SDG F DVF V + GK
Sbjct: 730 ATEVMVLTPDRHALFADIAGALSREGANVVGAQVTTTSDGRAF-DVFYVQEQGGKPFGWS 788
Query: 85 EVIDYIQQRLET-------------------------DASFAPSLRSSVGVMPTEEHTSI 119
+ YIQ RL +A+F + ++ + +++ I
Sbjct: 789 D--SYIQDRLRDAVQSAAEHGLSSKDARPMLKPLRRREAAFTVTPSVNLDLEASDDALVI 846
Query: 120 EFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLST 179
E TG DRPGL + L+D+ ++ A I + +RA +VT++ G+ RL+
Sbjct: 847 EATGRDRPGLLHALAKTLSDIGLSLEAARIDGYGERAVDTFYVTEN--GHKPSGDARLAG 904
Query: 180 IKELLFNVLRGYDD 193
IK L NVL G ++
Sbjct: 905 IKVHLMNVLAGAEE 918
>gi|409426404|ref|ZP_11260959.1| PII uridylyl-transferase [Pseudomonas sp. HYS]
Length = 899
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 29/201 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 747
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG K+IRD + DY IQ+R+ +FAP + ++
Sbjct: 748 YIVLDNDGDSIGDNPVRVKQIRDGLTDALRNPDDYPTIIQRRVPRQLKHFTFAPQV--TI 805
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 806 HNDAQRPVTILELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-ADN 864
Query: 169 YAIKDPKRLSTIKELLFNVLR 189
+ DP+ S +++ + LR
Sbjct: 865 LPLSDPQLCSRLQDAIVEQLR 885
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ T++++ + ++ G+L ++ ++ + +L
Sbjct: 780 DDYPTIIQRRVPRQLKHFTFAPQVTIHNDAQRPVTILELSAPDRPGLLARIGKIFLEFDL 839
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D D + D ++ +Q
Sbjct: 840 SLQNAKIATLGERVEDVFFITDADNLPLSDPQLCSRLQ 877
>gi|398864639|ref|ZP_10620171.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM78]
gi|398244757|gb|EJN30296.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM78]
Length = 900
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG K+IRD + DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E T DRPGL + V + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELTAPDRPGLLARVGTIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 866 QPLSDPLLCSRLQDAIVEQL 885
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L +V + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELTAPDRPGLLARVGTIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D + + + D + +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSRLQ 878
>gi|86356044|ref|YP_467936.1| PII uridylyl-transferase [Rhizobium etli CFN 42]
gi|86280146|gb|ABC89209.1| [protein-PII] uridylyltransferase protein [Rhizobium etli CFN 42]
Length = 944
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 824 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 883
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 884 TDLVGQKI 891
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD D KR
Sbjct: 838 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISGDSKR 897
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
+ + + D+ R+ P GI+
Sbjct: 898 ANITARMKAVMAEEQDELRERM----PSGII 924
>gi|224056635|ref|XP_002298947.1| predicted protein [Populus trichocarpa]
gi|222846205|gb|EEE83752.1| predicted protein [Populus trichocarpa]
Length = 413
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 12/181 (6%)
Query: 19 IDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDV-FNVIDCD 77
+DN+ T++++ + G+L +++ L D N+ I S + G D+ ++ D
Sbjct: 237 MDNSLSPGHTLVQIVCQDHKGLLYDIMRTLKDYNIQISYGRFSMNHGRACDIDLFLVQTD 296
Query: 78 GKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFSEVC 134
GKKI D + RLE + P ++V P E +E +G RP +F ++
Sbjct: 297 GKKIVDPRKQKALSSRLEMEL-VRPLRVATVSRGPDTELLVANPVELSGKGRPLVFHDIT 355
Query: 135 AVLADLHCNVVNAEIWTH--NDRAAAVVHV-TDHSTGYAIKDPKRLSTIKELLFNVLRGY 191
L L+ + +AEI DR V V D G A+ P+ S I++ ++ +L G+
Sbjct: 356 LALKMLNTCIFSAEIRRRMIGDREFEVYRVLLDEGEGLAV--PR--SKIEKQVWKMLMGW 411
Query: 192 D 192
+
Sbjct: 412 E 412
>gi|218782918|ref|YP_002434236.1| UTP-GlnB uridylyltransferase, GlnD [Desulfatibacillum alkenivorans
AK-01]
gi|218764302|gb|ACL06768.1| UTP-GlnB uridylyltransferase, GlnD [Desulfatibacillum alkenivorans
AK-01]
Length = 893
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
DD A +RR RV +DN++ T+++V + ++ G+L ++ L L I A I+
Sbjct: 772 DDNSASALRR---ERVSVDNDSSGFFTIVEVIAYDQLGLLYKITDALYRCGLDIWVAKIA 828
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQR-LET 96
+ +DVF V D DG+K+ E +D I+Q LET
Sbjct: 829 TKADQVVDVFYVRDFDGQKVDSPESVDAIKQTVLET 864
>gi|12229842|sp|Q9RAE4.2|GLND_RHILV RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
Length = 944
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N+ TVI+V+ +++ G+L ++ VL+D++L I+ A I++ G +D F V
Sbjct: 824 PPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYV 883
Query: 74 IDCDGKKI 81
D G+KI
Sbjct: 884 TDLVGQKI 891
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD D KR
Sbjct: 838 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISGDSKR 897
Query: 177 LSTIKELLFNVLRGYDDFRK---------AKTSLSPPG 205
+ + + D+ R+ A T+ +PP
Sbjct: 898 ANITARMKAVMAEEEDELRERMPSGIIAPAATARTPPA 935
>gi|421617884|ref|ZP_16058866.1| PII uridylyl-transferase [Pseudomonas stutzeri KOS6]
gi|409780129|gb|EKN59772.1| PII uridylyl-transferase [Pseudomonas stutzeri KOS6]
Length = 900
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+T T++++ + ++ G+L +V Q+ D +L ++ A I++ G DVF V
Sbjct: 801 PPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFV 860
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D D + + D + +QQ L
Sbjct: 861 TDADNQPLSDPQFCLRLQQAL 881
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 25/211 (11%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDT 748
Query: 71 FNVIDCDGKKI-----RDKEV--------------IDYIQQRLETDAS-FAPSLRSSVGV 110
+ V+D DG I R +E+ + IQ+R+ FA + ++
Sbjct: 749 YIVLDADGSPIGNNPERIEEIRNGLITALRNPDDYLTIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
T +E DRPGL + V + D +V NA+I T +R V VTD +
Sbjct: 809 DTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTD-ADNQP 867
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
+ DP+ +++ L L+ ++ + + +S+
Sbjct: 868 LSDPQFCLRLQQALVKELQQENEQQPSPSSI 898
>gi|398795140|ref|ZP_10555055.1| (protein-PII) uridylyltransferase [Pantoea sp. YR343]
gi|398206971|gb|EJM93727.1| (protein-PII) uridylyltransferase [Pantoea sp. YR343]
Length = 884
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 73/171 (42%), Gaps = 18/171 (10%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P V++ T I + S ++ + V L+ NL + A I +S G MD
Sbjct: 686 LNKPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 745
Query: 71 FNVIDCDGKKI---RDKEVIDYIQQRLETDASFAPSLR------------SSVGVMPT-- 113
F V++ DG + R +I ++Q + + P R + V +PT
Sbjct: 746 FIVLEPDGSPLAADRHPLIIQALEQAITQNEWVPPRTRRQSARLKHFSVDTEVNFLPTHT 805
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ + +E D+PGL + V V ADL ++ A I T +R + + D
Sbjct: 806 DRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILAD 856
>gi|238792757|ref|ZP_04636388.1| [Protein-PII] uridylyltransferase [Yersinia intermedia ATCC 29909]
gi|238727865|gb|EEQ19388.1| [Protein-PII] uridylyltransferase [Yersinia intermedia ATCC 29909]
Length = 880
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 18/168 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ + T I + S ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 685 PLVLVSHQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 744
Query: 74 IDCDGKKI-RDKE-VIDYIQQRLETDASF--------APSLR-----SSVGVMPT--EEH 116
++ DG + +D+ +I + ++ T ++ +P LR + +PT E
Sbjct: 745 LEPDGSPLAQDRHPIISHALEQAMTQPNYQHPRVRRLSPKLRHFSVPTETNFLPTHNERR 804
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T +E D+PGL + V + ADL ++ +A I T +R + + D
Sbjct: 805 TYLELIALDQPGLLARVGGIFADLGLSLHSARITTIGERVEDLFVLAD 852
>gi|448748399|ref|ZP_21730033.1| Protein-PII uridylyltransferase [Halomonas titanicae BH1]
gi|445564020|gb|ELY20152.1| Protein-PII uridylyltransferase [Halomonas titanicae BH1]
Length = 891
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 21/161 (13%)
Query: 48 LNDVNLVIKKAYI-SSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL--ETD------- 97
+ + L I A I +S W ++ F V+D G+ IRD I+ +++ L E D
Sbjct: 730 MEQLGLSIHDARIATSHNDWTLNTFIVLDNHGQPIRDPGHIEEMRRHLVEELDDPDDYPD 789
Query: 98 ----------ASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNA 147
F + P E T +E T DRPGL + V + + ++ A
Sbjct: 790 IVTRHTPRQLKHFKVPTEVLIEQDPANERTLLELTAPDRPGLLARVGRIFMEQDISLSAA 849
Query: 148 EIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+I T +R V +T + G + DP+R ++E L VL
Sbjct: 850 KIATLGERVEDVFFITTKA-GEPLTDPERQQQLRERLIEVL 889
>gi|398830549|ref|ZP_10588735.1| (protein-PII) uridylyltransferase [Phyllobacterium sp. YR531]
gi|398213986|gb|EJN00570.1| (protein-PII) uridylyltransferase [Phyllobacterium sp. YR531]
Length = 937
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 49/80 (61%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ V++D++L I A++++ G +DVF V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGVLSEITGVISDLSLDIASAHVTTFGEKVIDVFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G +I + I+++L
Sbjct: 894 DLVGHQITNTTRQSRIRKKL 913
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 99 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 158
+F + R + + + T IE G DRPG+ SE+ V++DL ++ +A + T ++
Sbjct: 829 AFKITPRVEINNTLSNKFTVIEVEGLDRPGVLSEITGVISDLSLDIASAHVTTFGEKVID 888
Query: 159 VVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
V +VTD G+ I + R S I++ L +
Sbjct: 889 VFYVTD-LVGHQITNTTRQSRIRKKLLALF 917
>gi|238751453|ref|ZP_04612945.1| [Protein-PII] uridylyltransferase [Yersinia rohdei ATCC 43380]
gi|238710320|gb|EEQ02546.1| [Protein-PII] uridylyltransferase [Yersinia rohdei ATCC 43380]
Length = 892
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 20/169 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V+I T I + S ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 697 PLVLISRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 756
Query: 74 IDCDGKKI-RDKEVI--DYIQQRLETDASF--------APSLR-----SSVGVMPT--EE 115
++ DG + +D+ I D +QQ + T ++ +P LR + +PT E
Sbjct: 757 LEPDGSPLAQDRHPIIRDALQQAM-TQPNYQHPRVRRLSPKLRHFSVPTETNYLPTHNER 815
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T +E D+PGL + V + ADL ++ +A I T +R + + D
Sbjct: 816 RTYLELIALDQPGLLARVGEIFADLGLSLHSARITTIGERVEDLFVLAD 864
>gi|344339494|ref|ZP_08770423.1| UTP-GlnB uridylyltransferase, GlnD [Thiocapsa marina 5811]
gi|343800798|gb|EGV18743.1| UTP-GlnB uridylyltransferase, GlnD [Thiocapsa marina 5811]
Length = 886
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 69/157 (43%), Gaps = 20/157 (12%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P VVI T T I + + ++ + ++ +L+ V L I A I +++GG ++ + V
Sbjct: 688 PLVVIRPVTARGGTEIFIYTTDRANLFGRITALLDQVGLNIMDARILTTEGGMAVNTYQV 747
Query: 74 IDCDGKKIRDKEVIDYIQQRLETDAS--------FAPSLRSSVGVMPTE----------- 114
+D DG I D ++ I+ L D + A S+ PTE
Sbjct: 748 LDQDGSPIHDTLRMEEIRSCLVADLAEDAGEEIQVARSMPRRHRYFPTETRVTFSTDEPN 807
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 151
T + DRPGL +EV AV + + NA+I T
Sbjct: 808 RRTIMRLATLDRPGLLAEVGAVFQECGIRLQNAKIAT 844
>gi|420241261|ref|ZP_14745409.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF080]
gi|398072002|gb|EJL63238.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF080]
Length = 945
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V++ N TVI+V+ +++ G+L + VL D++L I A I++ G +D F V
Sbjct: 826 PPSVILSNGLSNKFTVIEVECLDRTGLLADITAVLADLSLDIHSARITTFGEKVIDTFYV 885
Query: 74 IDCDGKKIRDKEVIDYIQQRLETDASFAP-SLRSSVGVMPT 113
D G+K+ ++ I RL+ S LRS MPT
Sbjct: 886 TDLVGQKVVNENRQGNIAARLKAVMSEQEDELRSG---MPT 923
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 9/132 (6%)
Query: 78 GKKIRDKEVIDYIQQRLETDASFA--PSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCA 135
GKK R EVI + + + +F PS+ S G+ + + T IE DR GL +++ A
Sbjct: 802 GKK-RLPEVIATRAKSRKRNKTFTIPPSVILSNGL--SNKFTVIEVECLDRTGLLADITA 858
Query: 136 VLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFR 195
VLADL ++ +A I T ++ +VTD G + + R I L V+ +D
Sbjct: 859 VLADLSLDIHSARITTFGEKVIDTFYVTD-LVGQKVVNENRQGNIAARLKAVMSEQEDEL 917
Query: 196 KAKTSLSPPGIM 207
+ S P GI+
Sbjct: 918 R---SGMPTGII 926
>gi|117928771|ref|YP_873322.1| PII uridylyl-transferase [Acidothermus cellulolyticus 11B]
gi|117649234|gb|ABK53336.1| metal dependent phosphohydrolase [Acidothermus cellulolyticus 11B]
Length = 771
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP VV+ ADATV +V + ++ G+L + ++L+D L ++ A + + G +DVF V
Sbjct: 683 PPPVVLLPAASADATVFEVRAHDRPGLLFTIARILSDHGLDVRLAQVETLGADAVDVFYV 742
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D GK + + + +++ LET
Sbjct: 743 TDTAGKPL-SEAAAEEVRRALET 764
>gi|452747344|ref|ZP_21947141.1| PII uridylyl-transferase [Pseudomonas stutzeri NF13]
gi|452008865|gb|EME01101.1| PII uridylyl-transferase [Pseudomonas stutzeri NF13]
Length = 900
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
Query: 3 DEYAKLIRR---------MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R PP+V I N+T T++++ + ++ G+L +V Q+ D +L
Sbjct: 781 DDYLTIIQRRVPRQLKHFAFPPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
++ A I++ G DVF V D D + + D + +QQ L
Sbjct: 841 SVQNAKIATLGERVEDVFFVTDADNQPLSDPQFCLRLQQAL 881
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 25/211 (11%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDT 748
Query: 71 FNVIDCDGKKI-----RDKEV--------------IDYIQQRLETDAS-FAPSLRSSVGV 110
+ V+D DG I R +E+ + IQ+R+ FA + ++
Sbjct: 749 YIVLDADGSPIGNNPERIEEIRSGLIAALRNPDDYLTIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
T +E DRPGL + V + D +V NA+I T +R V VTD +
Sbjct: 809 DTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTD-ADNQP 867
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
+ DP+ +++ L L+ ++ + + +S+
Sbjct: 868 LSDPQFCLRLQQALVKELQQENEQQPSPSSI 898
>gi|431927945|ref|YP_007240979.1| (protein-PII) uridylyltransferase [Pseudomonas stutzeri RCH2]
gi|431826232|gb|AGA87349.1| (protein-PII) uridylyltransferase [Pseudomonas stutzeri RCH2]
Length = 900
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+T T++++ + ++ G+L +V Q+ D +L ++ A I++ G DVF V
Sbjct: 801 PPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFV 860
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D D + + D + +QQ L
Sbjct: 861 TDADNQPLSDPQFCLRLQQAL 881
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 90/211 (42%), Gaps = 25/211 (11%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDT 748
Query: 71 FNVIDCDGKKI-RDKEVID------------------YIQQRLETDAS-FAPSLRSSVGV 110
+ V+D DG I + E ID IQ+R+ FA + ++
Sbjct: 749 YIVLDADGSPIGNNPERIDEIRKGLIAALRNPDDYLTIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
T +E DRPGL + V + D +V NA+I T +R V VTD +
Sbjct: 809 DTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTD-ADNQP 867
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
+ DP+ +++ L L+ ++ + + +S+
Sbjct: 868 LSDPQFCLRLQQALIKELQQENEQQPSPSSI 898
>gi|352086340|ref|ZP_08953881.1| UTP-GlnB uridylyltransferase, GlnD [Rhodanobacter sp. 2APBS1]
gi|351679639|gb|EHA62776.1| UTP-GlnB uridylyltransferase, GlnD [Rhodanobacter sp. 2APBS1]
Length = 877
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 29/173 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL-VIKKAYISSDGGWFMDVFNV 73
P V + + +T + V + ++ G+ V VL+ + V++ +SS G +D F +
Sbjct: 684 PLVAVHPLSVRGSTELFVYTPDRDGLFATVTAVLDRLRFSVMESRILSSPTGMALDTFLL 743
Query: 74 IDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTE------------------- 114
+D D ++ + +QQRL+ +L S GV P++
Sbjct: 744 LDADSQQPVSAARAEELQQRLQR------ALVQSAGVQPSKRGLSRHQKHFQMTPQISFH 797
Query: 115 ---EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T + GTDRPGL + V V+ V +A I T +R +TD
Sbjct: 798 AAGDRTQLALVGTDRPGLLAAVAQVMLATGVRVHDARIATFGERVEDFFQLTD 850
>gi|319789629|ref|YP_004151262.1| UTP-GlnB uridylyltransferase, GlnD [Thermovibrio ammonificans HB-1]
gi|317114131|gb|ADU96621.1| UTP-GlnB uridylyltransferase, GlnD [Thermovibrio ammonificans HB-1]
Length = 874
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Query: 7 KLIRRMNP---PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD 63
K RR P +V +DN T T+++V + ++ G+L + +VL + +++A I+++
Sbjct: 776 KTFRRSVPLPETKVKVDNETSDKYTIVEVSTHDRLGVLYTITKVLLEEQTRLRRAIITTE 835
Query: 64 GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAP 102
G +D F + D D KK+ D + + I++R+ S P
Sbjct: 836 GNRVIDSFYITDMDYKKVTDPQKLLRIKERIVEALSPKP 874
>gi|114327079|ref|YP_744236.1| PII uridylyl-transferase [Granulibacter bethesdensis CGDNIH1]
gi|114315253|gb|ABI61313.1| [protein-PII] uridylyltransferase [Granulibacter bethesdensis
CGDNIH1]
Length = 963
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ HT +E G DRPGL ++ A +A + +A I T+ RA V +V D G ++
Sbjct: 864 SHTHTVLEVNGRDRPGLMHDIAAAIAQQGLQIASAHITTYGVRAVDVFYVKD-VFGLKVE 922
Query: 173 DPKRLSTIKELLFNVLRGYDD 193
+ ++L+ +++ L L DD
Sbjct: 923 NERKLAKLRQALLGALTSPDD 943
Score = 46.6 bits (109), Expect = 0.010, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 46/81 (56%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRVV+DN+ TV++V+ ++ G++ + + L I A+I++ G +DVF V
Sbjct: 854 PPRVVVDNHASHTHTVLEVNGRDRPGLMHDIAAAIAQQGLQIASAHITTYGVRAVDVFYV 913
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ ++ + ++Q L
Sbjct: 914 KDVFGLKVENERKLAKLRQAL 934
>gi|392420714|ref|YP_006457318.1| PII uridylyl-transferase [Pseudomonas stutzeri CCUG 29243]
gi|390982902|gb|AFM32895.1| PII uridylyl-transferase [Pseudomonas stutzeri CCUG 29243]
Length = 900
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+T T++++ + ++ G+L +V Q+ D +L ++ A I++ G DVF V
Sbjct: 801 PPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFV 860
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D D + + D + +QQ L
Sbjct: 861 TDADNQPLSDPQFCLRLQQAL 881
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 25/211 (11%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDT 748
Query: 71 FNVIDCDGKKI-----RDKEV--------------IDYIQQRLETDAS-FAPSLRSSVGV 110
+ V+D DG I R +E+ + IQ+R+ FA + ++
Sbjct: 749 YIVLDADGSPIGNNPKRIEEIRSGLIAALRNPDDYLTIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
T +E DRPGL + V + D +V NA+I T +R V VTD +
Sbjct: 809 DTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTD-ADNQP 867
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
+ DP+ +++ L L+ ++ + + +S+
Sbjct: 868 LSDPQFCLRLQQALVKELQQENEQQPSPSSI 898
>gi|389798397|ref|ZP_10201414.1| PII uridylyl-transferase [Rhodanobacter sp. 116-2]
gi|388445005|gb|EIM01093.1| PII uridylyl-transferase [Rhodanobacter sp. 116-2]
Length = 863
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 29/173 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL-VIKKAYISSDGGWFMDVFNV 73
P V + + +T + V + ++ G+ V VL+ + V++ +SS G +D F +
Sbjct: 670 PLVAVHPLSVRGSTELFVYTPDRDGLFATVTAVLDRLRFSVMESRILSSPTGMALDTFLL 729
Query: 74 IDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTE------------------- 114
+D D ++ + +QQRL+ +L S GV P++
Sbjct: 730 LDADSQQPVSAARAEELQQRLQR------ALVQSAGVQPSKRGLSRHQKHFQMTPQISFH 783
Query: 115 ---EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ T + GTDRPGL + V V+ V +A I T +R +TD
Sbjct: 784 AAGDRTQLALVGTDRPGLLAAVAQVMLATGVRVHDARIATFGERVEDFFQLTD 836
>gi|110636357|ref|YP_676565.1| PII uridylyl-transferase [Chelativorans sp. BNC1]
gi|110287341|gb|ABG65400.1| UTP-GlnB uridylyltransferase, GlnD [Chelativorans sp. BNC1]
Length = 912
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Query: 85 EVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNV 144
EVI+ + +F R+ V + + IE DRPGL SEV +VL+DL ++
Sbjct: 792 EVIEKRTKPRRGTKAFRIEPRADVRNALSNRFSVIEIECLDRPGLLSEVTSVLSDLSLDI 851
Query: 145 VNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+A I T ++ +VTD TG + +P RL I+ L +
Sbjct: 852 ASAHITTFGEKVIDTFYVTD-LTGSKVDNPDRLEVIRRELIETI 894
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 52/93 (55%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PR + N +VI+++ +++ G+L +V VL+D++L I A+I++ G +D F V
Sbjct: 811 PRADVRNALSNRFSVIEIECLDRPGLLSEVTSVLSDLSLDIASAHITTFGEKVIDTFYVT 870
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSS 107
D G K+ + + ++ I++ L P R++
Sbjct: 871 DLTGSKVDNPDRLEVIRRELIETIENGPPRRNN 903
>gi|190149913|ref|YP_001968438.1| uridylyltransferase [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|307263237|ref|ZP_07544857.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|189915044|gb|ACE61296.1| uridylyltransferase [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|306871454|gb|EFN03178.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 850
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 20/168 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ N AT I + ++ + L++ Q+L+ + I A I +S G +D F V
Sbjct: 659 PLVLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDSFIV 718
Query: 74 IDCDGKKIRDKEVIDYIQQRLET------------------DASFAPSLRSSVGVMPTEE 115
+ +GK + + + I+Q LE SF + +
Sbjct: 719 TELNGKPLEEMRC-EQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLADSQQN 777
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT 163
T+ E DR GL + V +V L N+VNA+I T +R VT
Sbjct: 778 RTAFELFTLDREGLLARVSSVFNQLGLNLVNAKITTIGERVEDFFVVT 825
>gi|146281909|ref|YP_001172062.1| PII uridylyl-transferase [Pseudomonas stutzeri A1501]
gi|339493516|ref|YP_004713809.1| PII uridylyl-transferase [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
gi|386020180|ref|YP_005938204.1| PII uridylyl-transferase [Pseudomonas stutzeri DSM 4166]
gi|189041209|sp|A4VJR9.1|GLND_PSEU5 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|145570114|gb|ABP79220.1| protein-PII uridylyltransferase [Pseudomonas stutzeri A1501]
gi|327480152|gb|AEA83462.1| PII uridylyl-transferase [Pseudomonas stutzeri DSM 4166]
gi|338800888|gb|AEJ04720.1| PII uridylyl-transferase [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
Length = 900
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+T T++++ + ++ G+L +V Q+ D +L ++ A I++ G DVF V
Sbjct: 801 PPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFV 860
Query: 74 IDCDGKKIRDKEVIDYIQQ 92
D D + + D ++ +QQ
Sbjct: 861 TDADNQPLSDPQLCLRLQQ 879
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 91/211 (43%), Gaps = 25/211 (11%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDT 748
Query: 71 FNVIDCDGKKI-----RDKEV--------------IDYIQQRLETDAS-FAPSLRSSVGV 110
+ V++ DG I R +E+ + IQ+R+ FA + ++
Sbjct: 749 YIVLEADGSPIGNNPERIEEIRSGLIAALRNPDDYLTIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
T +E DRPGL + V + D +V NA+I T +R V VTD +
Sbjct: 809 DTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTD-ADNQP 867
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
+ DP+ +++ + L+ ++ + + +S+
Sbjct: 868 LSDPQLCLRLQQAIIKELQQENEQQPSPSSI 898
>gi|150395259|ref|YP_001325726.1| PII uridylyl-transferase [Sinorhizobium medicae WSM419]
gi|166232254|sp|A6U5G1.1|GLND_SINMW RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|150026774|gb|ABR58891.1| metal dependent phosphohydrolase [Sinorhizobium medicae WSM419]
Length = 949
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I N TVI+V+ +++ G+L +V VL+D++L I A+I++ G +D F V
Sbjct: 831 PEVTISNALSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVT 890
Query: 75 DCDGKKI 81
D G KI
Sbjct: 891 DLVGSKI 897
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 62/138 (44%), Gaps = 12/138 (8%)
Query: 78 GKKIRD-----KEVIDYIQQRLETDA---SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGL 129
GK I D K++ D I R + +F + ++ + + T IE G DR GL
Sbjct: 797 GKLIEDVLSGRKKLPDVIASRTRSKKRSRAFTVTPEVTISNALSNKFTVIEVEGLDRTGL 856
Query: 130 FSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLR 189
SEV AVL+DL ++ +A I T ++ +VTD G I R I L VL
Sbjct: 857 LSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTD-LVGSKITSENRQMNIAARLKAVLA 915
Query: 190 GYDDFRKAKTSLSPPGIM 207
G D + + P GI+
Sbjct: 916 GEVDEARERM---PSGII 930
>gi|168031081|ref|XP_001768050.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680688|gb|EDQ67122.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 219
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 41/217 (18%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG-GWFMDVFNV 73
P V+ID + A+AT++++ ++ G LL I+ L D+ L + + ++++G F V
Sbjct: 7 PIVLIDQESDAEATIVEISFGDRLGALLDTIKALKDLGLNVIRGVVTTEGPNLRRKKFLV 66
Query: 74 IDCD-GKKIRDKEVIDYIQ---------------QRLETDASFAPS---------LRSSV 108
D KK+ D E+++ I+ ++L +F + + + V
Sbjct: 67 TRLDNNKKVEDPELLEAIRLTIINNLLQYHPESGEQLAMGVAFGENPPKKEIDVDVATHV 126
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND------RAAAVVHV 162
V + + DRPGL E+ V+ D+ V +AEI T D A +V
Sbjct: 127 TVTREGSRSLLSVETADRPGLLLEILKVICDISIYVESAEIDTEADFLHFGLVAKDKFYV 186
Query: 163 TDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
T H + +++E+L N LR Y R+ +T
Sbjct: 187 TYHGEVLS-------KSMEEVLTNALRYY--LRRPET 214
>gi|419801642|ref|ZP_14326857.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae HK262]
gi|419844393|ref|ZP_14367684.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae
HK2019]
gi|385193249|gb|EIF40627.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae HK262]
gi|386417518|gb|EIJ31997.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae
HK2019]
Length = 861
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 85/196 (43%), Gaps = 33/196 (16%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVID 75
V I N T I V ++ + +V+ + I A I +SD G+ D F + +
Sbjct: 675 VKISNRFSNGGTEIFVYCPDQANLFNKVVSTIGAKKFSIHDAQILTSDDGYVFDNFIITE 734
Query: 76 CDGKKIRDKEVIDYIQQRLET------------DASFAPSLRSSVGVMPTE--------- 114
+G+ +R + ++ LET SFA + + + T+
Sbjct: 735 LNGELVRSER-----RRELETVLTSVLLGEKLPSMSFANNRQLQHFTVKTDVRFLKETKK 789
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
EHT +E D+PGL +++ + +L N+ NA+I T ++A +T+ G A+ +
Sbjct: 790 EHTELEVVALDKPGLLAQISQIFTELKLNICNAKITTVGEKAEDFFILTN-EKGIALTEE 848
Query: 175 KRLSTIKELLFNVLRG 190
+R LL NVL G
Sbjct: 849 ER-----GLLENVLYG 859
>gi|149185003|ref|ZP_01863320.1| PII uridylyl-transferase [Erythrobacter sp. SD-21]
gi|148831114|gb|EDL49548.1| PII uridylyl-transferase [Erythrobacter sp. SD-21]
Length = 919
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV+ DN TVI+V++ ++ +L ++ +VL + LV+ A+I+ G +D F V
Sbjct: 825 PRVLFDNKASNRFTVIEVNARDRPALLNRLARVLFESRLVVHSAHITHYGERAVDTFYVT 884
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G K+ E D ++ RL
Sbjct: 885 DLTGGKLAGGERQDRLEARL 904
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 69/164 (42%), Gaps = 22/164 (13%)
Query: 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVIDCDGKKIRD-- 83
AT++ V + + G+ ++ ++ I A I +S GW +D F V D G R+
Sbjct: 726 ATLVTVIASDHPGLFYRIAGGIHLAGGNIIDARIHTSRTGWALDNFLVQDPHGAPFREEQ 785
Query: 84 ------KEVIDYIQQRLETDASFA----PSLRS-SVGVMP--------TEEHTSIEFTGT 124
K + D + R++ A P RS + V P + T IE
Sbjct: 786 QLERLKKSIADALANRIDLTPKLAQRPLPHSRSKAFDVSPRVLFDNKASNRFTVIEVNAR 845
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
DRP L + + VL + V +A I + +RA +VTD + G
Sbjct: 846 DRPALLNRLARVLFESRLVVHSAHITHYGERAVDTFYVTDLTGG 889
>gi|52425360|ref|YP_088497.1| PII uridylyl-transferase [Mannheimia succiniciproducens MBEL55E]
gi|81170622|sp|Q65SZ8.1|GLND_MANSM RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|52307412|gb|AAU37912.1| GlnD protein [Mannheimia succiniciproducens MBEL55E]
Length = 875
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 90/184 (48%), Gaps = 18/184 (9%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVID 75
V I N A T + + ++ + L+V+ + + L I A I +S G+ D F V +
Sbjct: 688 VKISNRFSAGGTEVFIYCKDRPNLFLKVVAAIGNKKLSIHDAQIITSLDGYAFDSFIVTE 747
Query: 76 CDG-------KKIRDKEVIDYIQ-------QRLETDASFAPSLRSSVGVMPTEE--HTSI 119
DG +++ +K +I+ + Q E ++++ V + TE+ HT +
Sbjct: 748 LDGSLLKFDRRRVLEKAIINSLNSNELTKLQGSENHKLQHFNVKTEVRFLNTEKTTHTEM 807
Query: 120 EFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLST 179
E D+ GL ++V V ++L+ ++ NA+I T ++A +T+ + G A+ + +R S
Sbjct: 808 ELFTLDKAGLLADVSLVFSELNLSIQNAKITTIGEKAQDFFILTN-AKGEALSERERQSL 866
Query: 180 IKEL 183
++L
Sbjct: 867 SEKL 870
>gi|378824627|ref|YP_005187359.1| PII uridylyl-transferase [Sinorhizobium fredii HH103]
gi|365177679|emb|CCE94534.1| PII uridylyl-transferase [Sinorhizobium fredii HH103]
Length = 971
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V + N TVI+V+ +++ G+L +V VL+D++L I A+I++ G +D F V
Sbjct: 853 PEVTLSNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVT 912
Query: 75 DCDGKKIRDKEVIDYIQQRLET 96
D G KI ++ I RL+
Sbjct: 913 DLVGAKITNENRQINIAARLKA 934
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE G DR GL SEV AVL+DL ++ +A I T ++ +VTD G I + R
Sbjct: 866 TVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTD-LVGAKITNENR 924
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
I L VL G D + + P GI+
Sbjct: 925 QINIAARLKAVLAGEVDEARERM---PSGII 952
>gi|238784877|ref|ZP_04628877.1| [Protein-PII] uridylyltransferase [Yersinia bercovieri ATCC 43970]
gi|238714194|gb|EEQ06206.1| [Protein-PII] uridylyltransferase [Yersinia bercovieri ATCC 43970]
Length = 892
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 18/168 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ + T I + S ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 697 PLVLVSHQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFVV 756
Query: 74 IDCDGKKI-RDKE-VIDYIQQRLETDASF--------APSLR-----SSVGVMPT--EEH 116
++ DG + +D+ +I + ++ T ++ +P LR + +PT E
Sbjct: 757 LEPDGSPLAQDRHPIISHALEQAMTQPNYQHPRVRRLSPKLRHFSVPTETNFLPTHNERR 816
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T +E D+PGL + V + ADL ++ +A I T +R + + D
Sbjct: 817 TYLELIALDQPGLLARVGEIFADLGLSLHSARITTIGERVEDLFVLAD 864
>gi|291286752|ref|YP_003503568.1| UTP-GlnB uridylyltransferase, GlnD [Denitrovibrio acetiphilus DSM
12809]
gi|290883912|gb|ADD67612.1| UTP-GlnB uridylyltransferase, GlnD [Denitrovibrio acetiphilus DSM
12809]
Length = 863
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 16 RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVID 75
++V DN+ + T++ + + ++ G+L +++ N L +++A IS+D +D F ++D
Sbjct: 776 KIVFDNDVSTNYTIVDIYAKDRIGLLYDILRSFNKQELNVERAKISTDVDRVVDSFYLVD 835
Query: 76 CDGKKIRDKEVIDYIQ----QRLETDA 98
GKKI D+ V+D I+ + +ETD
Sbjct: 836 KHGKKITDQRVLDNIRGELSKEIETDT 862
>gi|436841087|ref|YP_007325465.1| [Protein-PII] uridylyltransferase [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
gi|432169993|emb|CCO23364.1| [Protein-PII] uridylyltransferase [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
Length = 843
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P ++ IDN + T+++V + ++ GIL + + + +N+ I+ A IS+ G DVF++
Sbjct: 753 PTQISIDNESSETYTLLEVITGDRSGILYDMASLFSRMNVDIRMARISTTGQSVFDVFHI 812
Query: 74 IDCDGKKIRDKEVIDYIQQRLE 95
+G KI+DKE + + LE
Sbjct: 813 ESPEGGKIKDKEHANELVSALE 834
>gi|159184269|ref|NP_353378.2| uridylyltransferase/uridylyl-removing enzyme UTase [Agrobacterium
fabrum str. C58]
gi|22256761|sp|Q8UIF1.1|GLND_AGRT5 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|159139596|gb|AAK86163.2| uridylyltransferase/uridylyl-removing enzyme UTase [Agrobacterium
fabrum str. C58]
Length = 942
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N TVI+V+ +++ G+L + V+ D++L I A I++ G +D F V
Sbjct: 826 PPSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYV 885
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G+K+ + I QRL+
Sbjct: 886 TDLFGQKVTNDNRQASIAQRLKA 908
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 92 QRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 151
+R ++ + PS+ S G+ + + T IE DRPGL +++ AV+ADL ++ +A I T
Sbjct: 817 RRKKSAFTIPPSVTISNGL--SNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITT 874
Query: 152 HNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDD 193
++ +VTD G + + R ++I + L V+ +D
Sbjct: 875 FGEKVIDTFYVTD-LFGQKVTNDNRQASIAQRLKAVMSEQED 915
>gi|335033078|ref|ZP_08526450.1| PII uridylyl-transferase [Agrobacterium sp. ATCC 31749]
gi|333795754|gb|EGL67079.1| PII uridylyl-transferase [Agrobacterium sp. ATCC 31749]
Length = 942
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N TVI+V+ +++ G+L + V+ D++L I A I++ G +D F V
Sbjct: 826 PPSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYV 885
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G+K+ + I QRL+
Sbjct: 886 TDLFGQKVTNDNRQASIAQRLKA 908
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 92 QRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 151
+R ++ + PS+ S G+ + + T IE DRPGL +++ AV+ADL ++ +A I T
Sbjct: 817 RRKKSAFTIPPSVTISNGL--SNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITT 874
Query: 152 HNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDD 193
++ +VTD G + + R ++I + L V+ +D
Sbjct: 875 FGEKVIDTFYVTD-LFGQKVTNDNRQASIAQRLKAVMSEQED 915
>gi|242280894|ref|YP_002993023.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio salexigens DSM
2638]
gi|242123788|gb|ACS81484.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio salexigens DSM
2638]
Length = 845
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 6 AKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
AK + P R+ +DN++ A+ T+I+V + ++ GIL ++ +N+ ++ A IS+ G
Sbjct: 749 AKSVPSRVPTRISVDNDSSAECTLIEVITQDRSGILYDMVASFARMNINLRMARISTTGE 808
Query: 66 WFMDVFNVIDCDGKKIRD----KEVIDYIQQRL 94
DVF+V +G +I D +E+I ++ L
Sbjct: 809 SVFDVFHVEGPEGGRIEDHIHLRELISALEYSL 841
>gi|238796605|ref|ZP_04640112.1| [Protein-PII] uridylyltransferase [Yersinia mollaretii ATCC 43969]
gi|238719583|gb|EEQ11392.1| [Protein-PII] uridylyltransferase [Yersinia mollaretii ATCC 43969]
Length = 892
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 18/168 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ + T I + S ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 697 PLVLVSHQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFVV 756
Query: 74 IDCDGKKI-RDKE-VIDYIQQRLETDASF--------APSLR-----SSVGVMPT--EEH 116
++ DG + +D+ +I + ++ T ++ +P LR + +PT E
Sbjct: 757 LEPDGSPLAQDRHPIISHALEQAMTQPNYQHPRVRRLSPKLRHFSVPTETNFLPTHNERR 816
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T +E D+PGL + V + ADL ++ +A I T +R + + D
Sbjct: 817 TYLELIALDQPGLLARVGEIFADLGLSLHSARITTIGERVEDLFVLAD 864
>gi|398801948|ref|ZP_10561179.1| (protein-PII) uridylyltransferase [Pantoea sp. GM01]
gi|398090630|gb|EJL81097.1| (protein-PII) uridylyltransferase [Pantoea sp. GM01]
Length = 884
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 18/171 (10%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P V++ T I + S ++ + V L+ NL + A I +S G MD
Sbjct: 686 LNKPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 745
Query: 71 FNVIDCDGKKI---RDKEVIDYIQQRLETDASFAPSLR------------SSVGVMPT-- 113
F V++ DG + R +I ++Q + P R + V +PT
Sbjct: 746 FIVLEPDGSPLAADRHPLIIQALEQAITQTEWVPPRTRRQSARLKHFSVDTEVNFLPTHT 805
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ + +E D+PGL + V V ADL ++ A I T +R + + D
Sbjct: 806 DRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILAD 856
>gi|426407999|ref|YP_007028098.1| PII uridylyl-transferase [Pseudomonas sp. UW4]
gi|426266216|gb|AFY18293.1| PII uridylyl-transferase [Pseudomonas sp. UW4]
Length = 900
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVID--------------YIQQRLETDA---SFAPSLRSSV 108
+ V+D DG I D K++ D IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIRDGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-AHN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 866 QPLSDPLLCSRLQDAIVEQL 885
>gi|398881660|ref|ZP_10636645.1| UTP:GlnB (protein PII) uridylyltransferase, partial [Pseudomonas
sp. GM60]
gi|398200795|gb|EJM87697.1| UTP:GlnB (protein PII) uridylyltransferase, partial [Pseudomonas
sp. GM60]
Length = 216
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 29/201 (14%)
Query: 14 PPRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMD 69
PP V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 4 PPLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLD 63
Query: 70 VFNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLRSS 107
+ V+D DG K+IR+ + DY IQ+R+ +FAP + +
Sbjct: 64 TYIVLDTDGDSIGDNPARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV--T 121
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+ T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 122 IHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-AN 180
Query: 168 GYAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 181 NQPLSDPLLCSRLQDAIVEQL 201
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 97 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDL 156
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D + + + D + +Q
Sbjct: 157 SLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSRLQ 194
>gi|424909280|ref|ZP_18332657.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
viciae USDA 2370]
gi|392845311|gb|EJA97833.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
viciae USDA 2370]
Length = 942
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N TVI+V+ +++ G+L + V+ D++L I A I++ G +D F V
Sbjct: 826 PPSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYV 885
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G+K+ + I QRL+
Sbjct: 886 TDLFGQKVTNDNRQASIAQRLKA 908
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 99 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 158
+ PS+ S G+ + + T IE DRPGL +++ AV+ADL ++ +A I T ++
Sbjct: 824 TIPPSVTISNGL--SNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVID 881
Query: 159 VVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDD 193
+VTD G + + R ++I + L V+ +D
Sbjct: 882 TFYVTD-LFGQKVTNDNRQASIAQRLKAVMSEQED 915
>gi|365858204|ref|ZP_09398157.1| protein-P-II uridylyltransferase [Acetobacteraceae bacterium
AT-5844]
gi|363714593|gb|EHL98089.1| protein-P-II uridylyltransferase [Acetobacteraceae bacterium
AT-5844]
Length = 932
Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ HT IE G DRPGL ++ A +++ + +A I T+ RA V +V D G I+
Sbjct: 848 SNTHTVIELNGRDRPGLLHDMTAAISEQGLQIASAHITTYGVRAVDVFYVKD-VFGLKIE 906
Query: 173 DPKRLSTIKELLFNVL 188
+ ++L++++E L L
Sbjct: 907 NERKLASLREALLAAL 922
Score = 44.3 bits (103), Expect = 0.056, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 47/81 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P RVVIDN+ TVI+++ ++ G+L + +++ L I A+I++ G +DVF V
Sbjct: 838 PGRVVIDNHASNTHTVIELNGRDRPGLLHDMTAAISEQGLQIASAHITTYGVRAVDVFYV 897
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G KI ++ + +++ L
Sbjct: 898 KDVFGLKIENERKLASLREAL 918
Score = 42.7 bits (99), Expect = 0.17, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Query: 95 ETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTH-N 153
E +A+ AP L S V+ T + TD PGLFS + LA ++V+A I T N
Sbjct: 720 EAEATGAP-LTVSTRVLEARSVTEVTVYVTDHPGLFSRIAGALAVAGASIVDARIHTMTN 778
Query: 154 DRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRG 190
RA V D + G A P +L+ + L+ L G
Sbjct: 779 GRALDTFWVQD-AQGGAFDSPHKLARLSVLIEQALSG 814
>gi|290957105|ref|YP_003488287.1| protein P-II uridylyltransferase [Streptomyces scabiei 87.22]
gi|260646631|emb|CBG69728.1| putative protein P-II uridylyltransferase [Streptomyces scabiei
87.22]
Length = 816
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV + ATVI+V + + G+L ++ + L D +L ++ A++S+ G +D F V
Sbjct: 731 PPRVTVAAAASRHATVIEVRAQDAPGLLHRIGRALEDAHLRVRSAHVSTLGANAVDAFYV 790
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
DG + E ++ ET
Sbjct: 791 TGTDGAPLPGDEAASVARKLEET 813
>gi|90580969|ref|ZP_01236770.1| PII uridylyl-transferase [Photobacterium angustum S14]
gi|90437847|gb|EAS63037.1| PII uridylyl-transferase [Vibrio angustum S14]
Length = 873
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 18/190 (9%)
Query: 6 AKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
A L + P +++ T + V S +K + V+ L+ NL + A I +S
Sbjct: 672 ALLTHDHDKPLILLSKKATRGGTEVFVYSKDKAKLFAIVVSELDKKNLSVHDAQIMNSKD 731
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRL-----ETDASFAP------SLRSSVGV 110
G+ +D F V+D +GK I R + + + L E AP ++++ V
Sbjct: 732 GYTLDTFMVLDPNGKAINENRHTTIRRTLTKALTVMKSERKIRRAPRKLLHFNVKTKVSF 791
Query: 111 MPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAA-AVVHVTDHST 167
+PT+ + T +E D PGL ++V AV A+ + ++ A+I T +RA + V D
Sbjct: 792 LPTKTGKKTMMELVALDMPGLLAKVGAVFAEHNISLQAAKITTIGERAEDFFILVNDQGC 851
Query: 168 GYAIKDPKRL 177
+++ K L
Sbjct: 852 NLSVEQQKVL 861
>gi|121998250|ref|YP_001003037.1| metal dependent phosphohydrolase [Halorhodospira halophila SL1]
gi|121589655|gb|ABM62235.1| metal dependent phosphohydrolase [Halorhodospira halophila SL1]
Length = 889
Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 21/169 (12%)
Query: 40 ILLQVIQVLNDVNLVIKKA-YISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL---- 94
+ + + L+ + L I+ A I++DGG+ +D + V++ G +++ ++ ++Q L
Sbjct: 715 LFARCVWALDRLGLSIQDARVITTDGGFTLDSYRVLEQHGAPPSEEQRLEEVRQALAAAA 774
Query: 95 -ETDASFAP----------SLRSSVGVM----PTEEHTSIEFTGTDRPGLFSEVCAVLAD 139
E AP R+ + P T +E DRPGL + V +
Sbjct: 775 AEQGPPPAPVARHIPRQLQHFRTETQIHFTDDPDNHRTVVELITADRPGLLARVGKAFSG 834
Query: 140 LHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
V NA+I T +RA V +TD G ++ P + ++E L+ +L
Sbjct: 835 CGVRVKNAKIATMGERAEDVFFITD-DQGQPLRLPVQYRCVREALYELL 882
>gi|145635426|ref|ZP_01791127.1| PII uridylyl-transferase [Haemophilus influenzae PittAA]
gi|145267300|gb|EDK07303.1| PII uridylyl-transferase [Haemophilus influenzae PittAA]
Length = 157
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 36/152 (23%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPT-- 113
I++ G+ D F + + +G E++++ ++R E + + +L+S ++ + P
Sbjct: 14 ITTQDGYVFDSFIITELNG------ELVEFDRRR-ELEQALTVALQSKKLPALSITPNRQ 66
Query: 114 -----------------EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+EHT +E D+PGL ++V + +L+ N++NA+I T ++A
Sbjct: 67 LQHFTVQTDVRFLHENKKEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKA 126
Query: 157 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+T+ G A+ +R E+L NVL
Sbjct: 127 EDFFILTNQF-GQALDSQQR-----EILRNVL 152
>gi|398873974|ref|ZP_10629217.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM74]
gi|398197674|gb|EJM84649.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM74]
Length = 900
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG K+IR+ + DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 866 QPLSDPLLCSRLQDAIVEQL 885
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D + + + D + +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSRLQ 878
>gi|408787213|ref|ZP_11198944.1| PII uridylyl-transferase [Rhizobium lupini HPC(L)]
gi|408486844|gb|EKJ95167.1| PII uridylyl-transferase [Rhizobium lupini HPC(L)]
Length = 942
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V I N TVI+V+ +++ G+L + V+ D++L I A I++ G +D F V
Sbjct: 826 PPSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYV 885
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G+K+ + I QRL+
Sbjct: 886 TDLFGQKVTNDNRQASIAQRLKA 908
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 99 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 158
+ PS+ S G+ + + T IE DRPGL +++ AV+ADL ++ +A I T ++
Sbjct: 824 TIPPSVTISNGL--SNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVID 881
Query: 159 VVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDD 193
+VTD G + + R ++I + L V+ +D
Sbjct: 882 TFYVTD-LFGQKVTNDNRQASIAQRLKAVMSEQED 915
>gi|408373493|ref|ZP_11171189.1| PII uridylyl-transferase [Alcanivorax hongdengensis A-11-3]
gi|407766661|gb|EKF75102.1| PII uridylyl-transferase [Alcanivorax hongdengensis A-11-3]
Length = 887
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P RVVI N+ D T + + ++++ G+L + ++ L+++ A I++ G DVF +
Sbjct: 796 PTRVVISNDLTNDRTAVDIQTLDRPGLLAHIGRIFMRFELLVQNARIATLGEKAEDVFFI 855
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D +G+ + D + +QQ L
Sbjct: 856 TDLNGEPVSDPALCQQLQQTL 876
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 87/207 (42%), Gaps = 27/207 (13%)
Query: 8 LIRRMNP--PRVVI---DNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YIS 61
L++R P P V+I + A + I + + + + + L+ + L I A I+
Sbjct: 675 LLQRDTPDDPLVLIRESSQSVLAGGSQIFIYTPDTRNLFSATVNALDSLGLTIMDARIIT 734
Query: 62 SDGGWFMDVFNVIDCDGKKI-----RDKEVIDYIQQRLETDASFAPSL------------ 104
S G+ +D + V+D G I R +++ + + L+ FA ++
Sbjct: 735 SADGFSLDTYIVLDEHGTPIGEDLARIEQIRKTLTETLKHPERFATTVSRRMPRRNKHFD 794
Query: 105 ---RSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH 161
R + T + T+++ DRPGL + + + V NA I T ++A V
Sbjct: 795 VPTRVVISNDLTNDRTAVDIQTLDRPGLLAHIGRIFMRFELLVQNARIATLGEKAEDVFF 854
Query: 162 VTDHSTGYAIKDPKRLSTIKELLFNVL 188
+TD + G + DP +++ L L
Sbjct: 855 ITDLN-GEPVSDPALCQQLQQTLIQEL 880
>gi|384247953|gb|EIE21438.1| hypothetical protein COCSUDRAFT_53990 [Coccomyxa subellipsoidea
C-169]
Length = 290
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 36/186 (19%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V IDN ATV+ ++ ++ G LL I L ++ L I++A I + G + F +
Sbjct: 77 PIVKIDNQHDPFATVVTIEFGDRLGQLLDTIAALKNLKLNIRRAKIKAGAG--ANKFYIT 134
Query: 75 DC-DGKKIRDKEVIDYIQQRL---------ETDASFA----------------------P 102
D +KI ++ I+ + E+ A+ P
Sbjct: 135 DALTSEKILKSARLEEIRLTIFNNLLKYHPESGAAIGWGASASPVTEADPLHPLGTRDTP 194
Query: 103 SLRSSVGVMPTEE--HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVV 160
+++SV V E H+ + DRPGL +++ L D+ NV++AE+ T A
Sbjct: 195 KIKTSVEVSEEESGTHSKVSIRTRDRPGLLTDIVHTLKDISVNVISAEVDTEGPVAKDEF 254
Query: 161 HVTDHS 166
+VT H
Sbjct: 255 YVTYHG 260
>gi|296282185|ref|ZP_06860183.1| PII uridylyl-transferase [Citromicrobium bathyomarinum JL354]
Length = 922
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 23/180 (12%)
Query: 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVIDCDGKKIRDKE 85
AT++ V + + GI +++ ++ V I A I ++ G+ +D F V D G+ + +
Sbjct: 729 ATLVTVIAADHPGIFMRIAGAIHLVGGNIIDARIHTTRTGYAVDNFLVQDPLGRPFGEDD 788
Query: 86 VIDYIQQR----LETDASFAPSL------RSSVG---VMP--------TEEHTSIEFTGT 124
+ I++ L P L R G V P + T IE
Sbjct: 789 QLARIERSIADGLTGGVQLVPKLAKRPLPRRGAGAFEVQPFVAFDNDASHRFTVIEVGAR 848
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
DRP L + + L + H + +A I + +RAA +VTD TG I DP RL ++ L
Sbjct: 849 DRPALLNRLARALFEQHAMIRSAHITHYGERAADTFYVTD-LTGDKITDPGRLEALRAAL 907
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V DN+ TVI+V + ++ +L ++ + L + + +I+ A+I+ G D F V
Sbjct: 828 PFVAFDNDASHRFTVIEVGARDRPALLNRLARALFEQHAMIRSAHITHYGERAADTFYVT 887
Query: 75 DCDGKKIRDKEVIDYIQQRLETDAS 99
D G KI D ++ ++ L AS
Sbjct: 888 DLTGDKITDPGRLEALRAALSDAAS 912
>gi|456388589|gb|EMF54029.1| glnD protein [Streptomyces bottropensis ATCC 25435]
Length = 816
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV + ATVI+V + + G+L ++ + L D +L ++ A++S+ G +D F V
Sbjct: 731 PPRVTVAPAASRHATVIEVRAQDAPGLLHRIGRALEDAHLRVRSAHVSTLGANAVDAFYV 790
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
DG + E ++ ET
Sbjct: 791 TGTDGAPLPGDEAASVARKLEET 813
>gi|50119969|ref|YP_049136.1| PII uridylyl-transferase [Pectobacterium atrosepticum SCRI1043]
gi|81170615|sp|Q6D8E5.1|GLND_ERWCT RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|49610495|emb|CAG73940.1| [protein-PII] uridylyltransferase [Pectobacterium atrosepticum
SCRI1043]
Length = 904
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 19/189 (10%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVF 71
N P V+I + T I + S ++ + V L+ NL + A I +S G MD F
Sbjct: 704 NKPLVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTF 763
Query: 72 NVIDCDGKKIRD--KEVIDYIQQRLETDASF--------APSLR-----SSVGVMPT--E 114
V++ DG + E+I + ++ T + +P LR + V +PT +
Sbjct: 764 IVLEPDGSPLAQDRHEMIRHALEQALTQRHYQHPRVRRTSPKLRHFSVPTEVNFLPTHTD 823
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+ +E + D+PGL + + + +DL+ ++ A I T +R + + D S A+K
Sbjct: 824 RRSYMELSALDQPGLLARIGEIFSDLNLSLHGARISTIGERVEDLFILAD-SDRRALKPE 882
Query: 175 KRLSTIKEL 183
RL + L
Sbjct: 883 LRLKLQERL 891
>gi|170768427|ref|ZP_02902880.1| protein-P-II uridylyltransferase [Escherichia albertii TW07627]
gi|170122531|gb|EDS91462.1| protein-P-II uridylyltransferase [Escherichia albertii TW07627]
Length = 890
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + +VI Y +++ T +++ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSTDRHDVIRYGLEQVLTQSTWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
E + +E D+PGL ++V + ADL ++ A I T +R
Sbjct: 812 ERKSFLELIALDQPGLLAQVGKIFADLGISLHGARITTIGER 853
>gi|238759952|ref|ZP_04621106.1| [Protein-PII] uridylyltransferase [Yersinia aldovae ATCC 35236]
gi|238701859|gb|EEP94422.1| [Protein-PII] uridylyltransferase [Yersinia aldovae ATCC 35236]
Length = 764
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 75/168 (44%), Gaps = 18/168 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ T I + S ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 569 PLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 628
Query: 74 IDCDGKKI-RDKE-VIDYIQQRLETDASFAP-------------SLRSSVGVMPT--EEH 116
++ DG + +D+ +I Q+ T ++ P S+ + +PT E
Sbjct: 629 LEPDGSPLAQDRHPIIRQALQQAMTQPNYQPPRVRRLSPKLRHFSVPTEANFLPTHNERR 688
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T +E D+PGL + V + ADL ++ +A I T +R + + D
Sbjct: 689 TYLELIALDQPGLLARVGEIFADLGLSLHSARITTIGERVEDLFVLAD 736
>gi|146308076|ref|YP_001188541.1| PII uridylyl-transferase [Pseudomonas mendocina ymp]
gi|421503969|ref|ZP_15950913.1| PII uridylyl-transferase [Pseudomonas mendocina DLHK]
gi|166990445|sp|A4XWU3.1|GLND_PSEMY RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|145576277|gb|ABP85809.1| metal dependent phosphohydrolase [Pseudomonas mendocina ymp]
gi|400345070|gb|EJO93436.1| PII uridylyl-transferase [Pseudomonas mendocina DLHK]
Length = 899
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 83/194 (42%), Gaps = 29/194 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDT 748
Query: 71 FNVIDCDGKKIRDK-------------------EVIDYIQQRLETDA---SFAPSLRSSV 108
+ V+D DG I D E IQ+R+ +FAP + ++
Sbjct: 749 YVVLDADGGSIGDNPARIKQIREGLIEALKNPDEYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E T DRPGL + + + + ++ NA+I T +R V VTD +
Sbjct: 807 HNDAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFVTD-ANN 865
Query: 169 YAIKDPKRLSTIKE 182
+ DP+ + ++E
Sbjct: 866 QPLSDPELCARLQE 879
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
DEY +I+R P P+V I N+ T++++ + ++ G+L ++ ++ + +L
Sbjct: 781 DEYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF V D + + + D E+ +Q+
Sbjct: 841 SLQNAKIATLGERVEDVFFVTDANNQPLSDPELCARLQE 879
>gi|398846487|ref|ZP_10603457.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM84]
gi|398252519|gb|EJN37706.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM84]
Length = 900
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 86/200 (43%), Gaps = 25/200 (12%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVIDYIQQRLETDASFAPSLRSSVGV------MPTE----- 114
+ V+D DG I D K++ D + + L + ++ V P +
Sbjct: 749 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFNFPPQVTILN 808
Query: 115 ----EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRQVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITD-ADNQP 867
Query: 171 IKDPKRLSTIKELLFNVLRG 190
+ DP+ S ++E + L+
Sbjct: 868 LSDPQLCSRLQEAIVQQLQA 887
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 46/79 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+ T++++ + ++ G+L ++ ++ + +L ++ A I++ G DVF +
Sbjct: 801 PPQVTILNDAQRQVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 74 IDCDGKKIRDKEVIDYIQQ 92
D D + + D ++ +Q+
Sbjct: 861 TDADNQPLSDPQLCSRLQE 879
>gi|284104807|ref|ZP_06386156.1| metal dependent phosphohydrolase [Candidatus Poribacteria sp.
WGA-A3]
gi|283830186|gb|EFC34444.1| metal dependent phosphohydrolase [Candidatus Poribacteria sp.
WGA-A3]
Length = 911
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%)
Query: 11 RMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDV 70
R + V IDN T TVI V + +K G+L ++ + L D+ L + A I + +DV
Sbjct: 814 RRHRTEVKIDNETSDHFTVIDVFADDKQGLLHEIAKTLYDLGLSVHSAKIGTRLDQVVDV 873
Query: 71 FNVIDCDGKKIRDKEVIDYIQQRLE 95
F V + +G+K+ + + IQ RL+
Sbjct: 874 FYVTERNGRKVEEARTCESIQARLQ 898
>gi|385872915|gb|AFI91435.1| [Protein-PII] uridylyltransferase [Pectobacterium sp. SCC3193]
Length = 903
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 23/189 (12%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V+I + T I + S ++ + V L+ NL + A I +S G MD F V
Sbjct: 705 PLVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIV 764
Query: 74 IDCDGKKI-RDKEVIDYIQQRLETDASF-----------APSLR-----SSVGVMPT--E 114
++ DG + +D+ + I+Q LE + +P LR + V +PT +
Sbjct: 765 LEPDGSPLAQDRH--EMIRQALEQSLTHRHYQHPRVRRPSPKLRHFSVPTEVNFLPTHTD 822
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+ +E + D+PGL + + + ADL+ ++ A I T +R + + D S A+K
Sbjct: 823 RRSYMELSALDQPGLLARIGEIFADLNLSLHGARISTIGERVEDLFILAD-SDRRALKPD 881
Query: 175 KRLSTIKEL 183
RL + L
Sbjct: 882 LRLKLQERL 890
>gi|261822601|ref|YP_003260707.1| PII uridylyl-transferase [Pectobacterium wasabiae WPP163]
gi|261606614|gb|ACX89100.1| UTP-GlnB uridylyltransferase, GlnD [Pectobacterium wasabiae WPP163]
Length = 903
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 23/189 (12%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V+I + T I + S ++ + V L+ NL + A I +S G MD F V
Sbjct: 705 PLVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIV 764
Query: 74 IDCDGKKI-RDKEVIDYIQQRLETDASF-----------APSLR-----SSVGVMPT--E 114
++ DG + +D+ + I+Q LE + +P LR + V +PT +
Sbjct: 765 LEPDGSPLAQDRH--EMIRQALEQSLTHRHYQHPRVRRPSPKLRHFSVPTEVNFLPTHTD 822
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
+ +E + D+PGL + + + ADL+ ++ A I T +R + + D S A+K
Sbjct: 823 RRSYMELSALDQPGLLARIGEIFADLNLSLHGARISTIGERVEDLFILAD-SDRRALKPD 881
Query: 175 KRLSTIKEL 183
RL + L
Sbjct: 882 LRLKLQERL 890
>gi|114562446|ref|YP_749959.1| PII uridylyl-transferase [Shewanella frigidimarina NCIMB 400]
gi|114333739|gb|ABI71121.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella frigidimarina NCIMB
400]
Length = 857
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 87/190 (45%), Gaps = 20/190 (10%)
Query: 6 AKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
A L + P V++ +T T + V S +K + V+ VL++ N+ + A I +S
Sbjct: 654 AILKHHHDEPLVLMSKHTTRGGTELFVYSKDKPKLFATVMTVLDNKNINVHDANIMTSKD 713
Query: 65 GWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETD-ASFAPSL---------------RSSV 108
+ +D F +++ DG+ I I I++ LE AS P L + V
Sbjct: 714 NYALDTFVILEQDGEPIIQLSRIQSIRKALEKALASENPKLPKFRKLARIMKPFNVATHV 773
Query: 109 GVMPTEEHTS--IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
+P+ H + +E D PGL ++V L + ++ A+I T +RA + +
Sbjct: 774 SFLPSARHGTSMMELITLDTPGLLAKVGDTLYRCNVTLLAAKITTIGERAEDFF-ILQNQ 832
Query: 167 TGYAIKDPKR 176
+G A+ +P++
Sbjct: 833 SGTALDEPQQ 842
>gi|329891103|ref|ZP_08269446.1| protein-P-II uridylyltransferase [Brevundimonas diminuta ATCC
11568]
gi|328846404|gb|EGF95968.1| protein-P-II uridylyltransferase [Brevundimonas diminuta ATCC
11568]
Length = 812
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 15/124 (12%)
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG--Y 169
P E + DRPGLF+++ A L+ +VV A + T +D A V G Y
Sbjct: 585 PLESTARVAVAARDRPGLFADLAATLSMAGADVVGARLATADDGMALDVFEIQDGAGEPY 644
Query: 170 AIKDPKRLST-IKELLFNVLRGYDDFRKAKTS-LSPPGIMNRERRLHQIMFDDRDYERVE 227
++P+RL+ +K + VL+G A+TS L PP + R + +FD R R++
Sbjct: 645 GGREPRRLAILVKAMERAVLKG------ARTSTLEPPRVSAR-----RAVFDVRPVVRID 693
Query: 228 KAVG 231
G
Sbjct: 694 ADTG 697
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 42/77 (54%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V ID +T A VI+V ++ G+L + + ++ + A+++S G +D F +
Sbjct: 688 PVVRIDADTGTSAVVIEVSGADRPGLLADLARTISAHGYSTRSAHVASFGERAVDGFYIT 747
Query: 75 DCDGKKIRDKEVIDYIQ 91
D DG+K + K ++ ++
Sbjct: 748 DADGRKPKSKARLEALK 764
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 96/235 (40%), Gaps = 37/235 (15%)
Query: 30 IKVDSVNKHGILLQVIQVLNDVNL-VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKE--- 85
+ V + ++ G+ + L+ V+ ++D G +DVF + D G+ +E
Sbjct: 592 VAVAARDRPGLFADLAATLSMAGADVVGARLATADDGMALDVFEIQDGAGEPYGGREPRR 651
Query: 86 --VIDYIQQRLETDASFAPSL--------RSSVGVMP-----TEEHTS---IEFTGTDRP 127
++ +R + +L R+ V P + TS IE +G DRP
Sbjct: 652 LAILVKAMERAVLKGARTSTLEPPRVSARRAVFDVRPVVRIDADTGTSAVVIEVSGADRP 711
Query: 128 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 187
GL +++ ++ + +A + + +RA ++TD + G K RL +K L V
Sbjct: 712 GLLADLARTISAHGYSTRSAHVASFGERAVDGFYITD-ADGRKPKSKARLEALKVDLLEV 770
Query: 188 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQT 242
L +T P G RR+ + RD +E A+GR SS PQ
Sbjct: 771 L--------DRTLQGPAG-----RRIVPVRASVRDVSDLEGALGR-SPVSSGPQA 811
>gi|397687902|ref|YP_006525221.1| PII uridylyl-transferase [Pseudomonas stutzeri DSM 10701]
gi|395809458|gb|AFN78863.1| PII uridylyl-transferase [Pseudomonas stutzeri DSM 10701]
Length = 900
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 48/81 (59%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+T T+I+V + ++ G+L ++ Q+ + +L ++ A I++ G DVF V
Sbjct: 801 PPQVTIHNDTQRPQTIIEVIAPDRPGLLARIGQLFLEFDLSVQNAKIATMGERVEDVFFV 860
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
+ D + + D ++ +QQ L
Sbjct: 861 TNADNQPLSDLQLCTQLQQAL 881
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 90/212 (42%), Gaps = 27/212 (12%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQHEFEGGTQIFIYAADQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDGKKI-RDKEVIDYIQQRLETDA--------------------SFAPSLRSSVG 109
+ V+D DG I D E I I+Q L T+A FA + ++
Sbjct: 749 YIVLDADGAPIGNDPERIQEIRQGL-TEALRNPEDYLTIIKRHVPRQLKHFAFPPQVTIH 807
Query: 110 VMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
T IE DRPGL + + + + +V NA+I T +R V VT+ +
Sbjct: 808 NDTQRPQTIIEVIAPDRPGLLARIGQLFLEFDLSVQNAKIATMGERVEDVFFVTN-ADNQ 866
Query: 170 AIKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 201
+ D + + +++ L L ++ + + +S+
Sbjct: 867 PLSDLQLCTQLQQALVKQLSQENEHQPSPSSI 898
>gi|322831586|ref|YP_004211613.1| UTP-GlnB uridylyltransferase, GlnD [Rahnella sp. Y9602]
gi|384256700|ref|YP_005400634.1| PII uridylyl-transferase [Rahnella aquatilis HX2]
gi|321166787|gb|ADW72486.1| UTP-GlnB uridylyltransferase, GlnD [Rahnella sp. Y9602]
gi|380752676|gb|AFE57067.1| PII uridylyl-transferase [Rahnella aquatilis HX2]
Length = 896
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 69/158 (43%), Gaps = 17/158 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ T I + S ++ + V L+ NL I A I ++ G MD F V
Sbjct: 702 PLVLVSRQATRGGTEIFIWSPDRPYLFATVAGELDRRNLSIHDAQIFTNRDGMAMDTFIV 761
Query: 74 IDCDGKKIRD--KEVIDYIQQRLETDASFAP------------SLRSSVGVMPT--EEHT 117
++ DG + E I Y ++ T A P S+++ V +PT + T
Sbjct: 762 LEPDGSPLAQDRHEAIRYALEQSMTQAYQPPRARRPSPKLRHFSVQTEVSFLPTHTDRRT 821
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+E D+PGL + V V +DL ++ A I T +R
Sbjct: 822 YMELVSLDQPGLLARVGEVFSDLGLSLHGARISTIGER 859
>gi|387892452|ref|YP_006322749.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens A506]
gi|387162642|gb|AFJ57841.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens A506]
Length = 900
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 31/188 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLR-SS 107
+ V+D DG KKIR+ + DY IQ+R+ +FAP + S+
Sbjct: 749 YIVLDTDGDSIGDNPARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
P T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPV---TVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITD-AD 864
Query: 168 GYAIKDPK 175
+ DP+
Sbjct: 865 NQPLSDPQ 872
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEV 86
++ A I++ G DVF + D D + + D ++
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSDPQL 873
>gi|157376295|ref|YP_001474895.1| PII uridylyl-transferase [Shewanella sediminis HAW-EB3]
gi|157318669|gb|ABV37767.1| (Protein-PII) uridylyltransferase [Shewanella sediminis HAW-EB3]
Length = 859
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 78/170 (45%), Gaps = 19/170 (11%)
Query: 6 AKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
A L + + P V+I +T T + + +K + V+ VL++ N+ + +A I +S
Sbjct: 654 AILKHKQDEPLVLISKHTTRGGTELFIYGKDKPKLFTTVMAVLDNKNINVHEAGIMASKD 713
Query: 65 GWFMDVFNVIDCDGKKI----RDKEVIDYIQQRLETDASFAPSL------------RSSV 108
+ +D F +++ DG + R + + + + L +D S P R+ V
Sbjct: 714 QYVLDSFVILEQDGSPVSRVSRIQALRKTLIKALNSDTSKLPKFKKLSRKMKPFRVRTQV 773
Query: 109 GVMPTEEHTS--IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+P+ H + +E D PGL ++V +L ++ A+I T +RA
Sbjct: 774 NFLPSRRHGTSMMELIALDSPGLLAKVGDILYRCQLKLLAAKITTIGERA 823
>gi|398917470|ref|ZP_10658173.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM49]
gi|398172864|gb|EJM60716.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM49]
Length = 900
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVID--------------YIQQRLETDA---SFAPSLRSSV 108
+ V+D DG I D K++ D IQ+R+ +FAP + ++
Sbjct: 749 YIVLDADGDSIGDNPARVKQIRDGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 866 QPLSDPLLCSRLQDAIVEQL 885
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DNYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELTAPDRPGLLARIGTIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D + + + D + +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSRLQ 878
>gi|395648131|ref|ZP_10435981.1| PII uridylyl-transferase [Pseudomonas extremaustralis 14-3 substr.
14-3b]
Length = 900
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 31/201 (15%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLR-SS 107
+ V+D +G KKIR+ + DY IQ+R+ +FAP + S+
Sbjct: 749 YIVLDTEGESIGDNPARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
P T +E + DRPGL + V + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPV---TVLELSAPDRPGLLARVGGIFLEFDLSLQNAKIATLGERVEDVFFITD-AD 864
Query: 168 GYAIKDPKRLSTIKELLFNVL 188
+ DP+ ++E + L
Sbjct: 865 NQPLSDPELCRRLQEAIVQQL 885
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L +V + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPDRPGLLARVGGIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF + D D + + D E+ +Q+
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSDPELCRRLQE 879
>gi|444309189|ref|ZP_21144829.1| PII uridylyl-transferase [Ochrobactrum intermedium M86]
gi|443487580|gb|ELT50342.1| PII uridylyl-transferase [Ochrobactrum intermedium M86]
Length = 934
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I + R
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKISNATR 905
Query: 177 LSTIKELLFNVL 188
I+ L VL
Sbjct: 906 QGNIRRKLLGVL 917
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTFSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIRRKL 913
>gi|302542214|ref|ZP_07294556.1| protein-P-II uridylyltransferase [Streptomyces hygroscopicus ATCC
53653]
gi|302459832|gb|EFL22925.1| protein-P-II uridylyltransferase [Streptomyces himastatinicus ATCC
53653]
Length = 448
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 5 YAKLIRRMN----PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
Y K RR PPRV I + ATVI+V + + G+L ++ + L L ++ A++
Sbjct: 351 YRKYPRRRGVHAPPPRVTIAPGSSQLATVIEVRAQDIPGLLHRIGRALEAAGLTVRSAHV 410
Query: 61 SSDGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRL 94
S+ G +D F V D G + R EV ++Q L
Sbjct: 411 STLGANAVDAFYVTDPTGAPLAPMRAAEVAREVEQAL 447
>gi|148259925|ref|YP_001234052.1| PII uridylyl-transferase [Acidiphilium cryptum JF-5]
gi|338981069|ref|ZP_08632305.1| [Protein-PII] uridylyltransferase [Acidiphilium sp. PM]
gi|146401606|gb|ABQ30133.1| metal dependent phosphohydrolase [Acidiphilium cryptum JF-5]
gi|338208035|gb|EGO95934.1| [Protein-PII] uridylyltransferase [Acidiphilium sp. PM]
Length = 938
Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 46/81 (56%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRVV+DN+ TVI+V+ ++ G+L V + L I A+I++ G +DVF V
Sbjct: 843 PPRVVVDNSASNRHTVIEVNGRDRPGLLHDVTAAITSQGLQIASAHITTYGVRAVDVFYV 902
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K++++ + ++ L
Sbjct: 903 KDVFGLKVQNERKLAQLRSAL 923
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ HT IE G DRPGL +V A + + +A I T+ RA V +V D G ++
Sbjct: 853 SNRHTVIEVNGRDRPGLLHDVTAAITSQGLQIASAHITTYGVRAVDVFYVKD-VFGLKVQ 911
Query: 173 DPKRLSTIKELLFNVLRG 190
+ ++L+ ++ L L G
Sbjct: 912 NERKLAQLRSALIEALAG 929
>gi|326403121|ref|YP_004283202.1| PII uridylyl-transferase [Acidiphilium multivorum AIU301]
gi|325049982|dbj|BAJ80320.1| PII uridylyl-transferase [Acidiphilium multivorum AIU301]
Length = 938
Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 46/81 (56%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRVV+DN+ TVI+V+ ++ G+L V + L I A+I++ G +DVF V
Sbjct: 843 PPRVVVDNSASNRHTVIEVNGRDRPGLLHDVTAAITSQGLQIASAHITTYGVRAVDVFYV 902
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K++++ + ++ L
Sbjct: 903 KDVFGLKVQNERKLAQLRSAL 923
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+ HT IE G DRPGL +V A + + +A I T+ RA V +V D G ++
Sbjct: 853 SNRHTVIEVNGRDRPGLLHDVTAAITSQGLQIASAHITTYGVRAVDVFYVKD-VFGLKVQ 911
Query: 173 DPKRLSTIKELLFNVLRG 190
+ ++L+ ++ L L G
Sbjct: 912 NERKLAQLRSALIEALAG 929
>gi|170723245|ref|YP_001750933.1| PII uridylyl-transferase [Pseudomonas putida W619]
gi|229487482|sp|B1JBR2.1|GLND_PSEPW RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|169761248|gb|ACA74564.1| UTP-GlnB uridylyltransferase, GlnD [Pseudomonas putida W619]
Length = 900
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 25/200 (12%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVIDYIQQRLETDASFAPSLR-------------SSVGVMP 112
+ V+D DG I D K++ D + + L + ++ V ++
Sbjct: 749 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFNFPPQVTILN 808
Query: 113 TEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRAVTILEITAPDRPGLLARIGRIFLEFDLSLQNAKIATLGERVEDVFFITD-ADNQP 867
Query: 171 IKDPKRLSTIKELLFNVLRG 190
+ DP+ S ++E + L+
Sbjct: 868 LSDPQLCSRLQEAIVQQLQA 887
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 46/79 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+ T++++ + ++ G+L ++ ++ + +L ++ A I++ G DVF +
Sbjct: 801 PPQVTILNDAQRAVTILEITAPDRPGLLARIGRIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 74 IDCDGKKIRDKEVIDYIQQ 92
D D + + D ++ +Q+
Sbjct: 861 TDADNQPLSDPQLCSRLQE 879
>gi|388543702|ref|ZP_10146992.1| PII uridylyl-transferase [Pseudomonas sp. M47T1]
gi|388278259|gb|EIK97831.1| PII uridylyl-transferase [Pseudomonas sp. M47T1]
Length = 900
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVID--------------YIQQRLETDA---SFAPSLRSSV 108
+ V+D DG I D KE+ D IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGGSIGDNPVRVKEIRDGLAEALRNPDDYPNIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTILELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-ADN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP+ S +++ + + L
Sbjct: 866 QPLSDPQLCSRLQDAIVDHL 885
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ T++++ + ++ G+L ++ ++ + +L
Sbjct: 781 DDYPNIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTILELSAPDRPGLLARIGKIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D D + + D ++ +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSRLQ 878
>gi|440737197|ref|ZP_20916770.1| PII uridylyl-transferase [Pseudomonas fluorescens BRIP34879]
gi|440382379|gb|ELQ18883.1| PII uridylyl-transferase [Pseudomonas fluorescens BRIP34879]
Length = 897
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 31/188 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLR-SS 107
+ V+D +G KKIRD + DY IQ+R+ +FAP + S+
Sbjct: 749 YIVLDTEGESIGDNPARVKKIRDGLTDALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
P T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPV---TVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITD-AD 864
Query: 168 GYAIKDPK 175
+ DP+
Sbjct: 865 NQPLSDPE 872
Score = 43.5 bits (101), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D D + + D E+ +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSDPELCRRLQ 878
>gi|388471183|ref|ZP_10145392.1| protein-P-II uridylyltransferase [Pseudomonas synxantha BG33R]
gi|388007880|gb|EIK69146.1| protein-P-II uridylyltransferase [Pseudomonas synxantha BG33R]
Length = 900
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 31/188 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLR-SS 107
+ V+D DG KKIR+ + DY IQ+R+ +FAP + S+
Sbjct: 749 YIVLDTDGDSIGDNPARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
P T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPV---TVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITD-AD 864
Query: 168 GYAIKDPK 175
+ DP+
Sbjct: 865 NQPLSDPE 872
Score = 43.5 bits (101), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D D + + D E+ +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSDPELCRRLQ 878
>gi|408483321|ref|ZP_11189540.1| PII uridylyl-transferase [Pseudomonas sp. R81]
Length = 356
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 31/201 (15%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 145 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 204
Query: 71 FNVIDCDG----------KKIRD---------KEVIDYIQQRLETDA---SFAPSLR-SS 107
+ V+D DG KKIR+ E IQ+R+ +FAP + S+
Sbjct: 205 YIVLDTDGDSIGDNPARVKKIREGLTEALRNPDEYPTIIQRRVPRQLKHFAFAPQVTISN 264
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
P T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 265 DAQRPV---TVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITD-AD 320
Query: 168 GYAIKDPKRLSTIKELLFNVL 188
+ DP+ ++E + L
Sbjct: 321 NQPLSDPELCLRLQEAIVQQL 341
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
DEY +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 237 DEYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDL 296
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF + D D + + D E+ +Q+
Sbjct: 297 SLQNAKIATLGERVEDVFFITDADNQPLSDPELCLRLQE 335
>gi|447915634|ref|YP_007396202.1| PII uridylyl-transferase [Pseudomonas poae RE*1-1-14]
gi|445199497|gb|AGE24706.1| PII uridylyl-transferase [Pseudomonas poae RE*1-1-14]
Length = 897
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 31/188 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLR-SS 107
+ V+D +G KKIRD + DY IQ+R+ +FAP + S+
Sbjct: 749 YIVLDTEGESIGDNPARVKKIRDGLTDALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
P T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPV---TVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITD-AD 864
Query: 168 GYAIKDPK 175
+ DP+
Sbjct: 865 NQPLSDPE 872
Score = 43.5 bits (101), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D D + + D E+ +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSDPELCRRLQ 878
>gi|345430299|ref|YP_004823420.1| uridylyltransferase [Haemophilus parainfluenzae T3T1]
gi|301156363|emb|CBW15834.1| uridylyltransferase [Haemophilus parainfluenzae T3T1]
Length = 861
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 80/184 (43%), Gaps = 32/184 (17%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVID 75
V I N + T I V ++ + +V+ + I A I +SD G+ D F + +
Sbjct: 675 VKISNRFSSGGTEIFVYCPDQANLFNKVVSTIGAKKFSIHDAQILTSDDGYVFDSFIITE 734
Query: 76 CDGKKIRDKEVIDYIQQRLETDA--------------SFAPSLRSSVGVMPTE------- 114
+G+ +R ++R E +A SFA + + + T+
Sbjct: 735 LNGELVRS-------ERRRELEAVLTSVLLGEKLPSVSFANNRQLQHFTVKTDVRFLKET 787
Query: 115 --EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
EHT +E D+PGL +++ + +L N+ NA+I T ++A +T+ G A+
Sbjct: 788 KKEHTELEIVALDKPGLLAQISQIFTELKLNICNAKITTVGEKAEDFFILTNEK-GTALT 846
Query: 173 DPKR 176
+ +R
Sbjct: 847 EEER 850
>gi|114321016|ref|YP_742699.1| UTP-GlnB uridylyltransferase, GlnD [Alkalilimnicola ehrlichii
MLHE-1]
gi|114227410|gb|ABI57209.1| UTP-GlnB uridylyltransferase, GlnD [Alkalilimnicola ehrlichii
MLHE-1]
Length = 894
Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 78/169 (46%), Gaps = 21/169 (12%)
Query: 40 ILLQVIQVLNDVNLVIKKA-YISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLET-- 96
+ + + L+ + L I+ A I++D G+ +D + V++ +G+ + D+ + +RL T
Sbjct: 718 VFARTVSTLDRLGLNIQDARIITTDQGYTLDSYLVLEDNGEPVTDEGRCREMVERLRTSL 777
Query: 97 -DASFAPSL-------RSSVGVMPTE---------EHTSIEFTGTDRPGLFSEVCAVLAD 139
DA P L R PT+ + T +E DRPGL ++V +
Sbjct: 778 ADAHRPPDLAEHRLPRRLKHFSTPTQINFSTDGPNQRTVLELITGDRPGLLAQVGQAFSQ 837
Query: 140 LHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+ NA+I T +RA V +TD + DP + ++++L + L
Sbjct: 838 CRVKLKNAKIATIGERAEDVFFITD-DQDEPLADPVQFRCLRDVLSDCL 885
>gi|224117840|ref|XP_002317681.1| predicted protein [Populus trichocarpa]
gi|222860746|gb|EEE98293.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 85/183 (46%), Gaps = 14/183 (7%)
Query: 18 VIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDVFNVID 75
++DN T++++ + G+L +++ L D N+ I + YI +D+F ++
Sbjct: 235 IMDNLLSPAHTLVQIVCQDHKGLLYDIMRTLKDYNIQISYGRFYIKHRRTCEIDLF-IMQ 293
Query: 76 CDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFSE 132
DGKKI D + RLE + P + V P E +E +G RP +F +
Sbjct: 294 ADGKKIVDPNKQKALSSRLEMEL-VRPLRVAVVSRGPDTELMVANPVELSGKGRPLVFHD 352
Query: 133 VCAVLADLHCNVVNAEIWTH--NDRAAAVVHV-TDHSTGYAIKDPKRLSTIKELLFNVLR 189
+ L L+ + +AEI DR V V D G A+ P+R I+E ++ +L
Sbjct: 353 ITLALTMLNSCIFSAEIRRRMIGDREFEVYRVLLDEGEGLAV--PRR--KIEEQVWKMLM 408
Query: 190 GYD 192
G++
Sbjct: 409 GWE 411
>gi|304396642|ref|ZP_07378523.1| UTP-GlnB uridylyltransferase, GlnD [Pantoea sp. aB]
gi|304356151|gb|EFM20517.1| UTP-GlnB uridylyltransferase, GlnD [Pantoea sp. aB]
Length = 884
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 8 LIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGW 66
L+ + P V++ T I + S ++ + V L+ NL + A I +S G
Sbjct: 682 LVHDLKKPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGM 741
Query: 67 FMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDASFAP-------------SLRSSVGV 110
MD F V++ DG + R +I ++Q + T + + P S+ + V
Sbjct: 742 AMDTFIVLEPDGSPLSPDRHPMIIQALEQAI-TQSDWVPPRTRRPSAKLRHFSVDTEVNF 800
Query: 111 MPT--EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+PT + + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 801 LPTHTDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGER 847
>gi|423690335|ref|ZP_17664855.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens SS101]
gi|388002188|gb|EIK63517.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens SS101]
Length = 900
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 31/188 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLR-SS 107
+ V+D DG KKIR+ + DY IQ+R+ +FAP + S+
Sbjct: 749 YIVLDTDGDSIGDNPARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
P T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPV---TVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITD-AD 864
Query: 168 GYAIKDPK 175
+ DP+
Sbjct: 865 NQPLSDPE 872
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEV 86
++ A I++ G DVF + D D + + D E+
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSDPEL 873
>gi|239830994|ref|ZP_04679323.1| protein-P-II uridylyltransferase [Ochrobactrum intermedium LMG
3301]
gi|239823261|gb|EEQ94829.1| protein-P-II uridylyltransferase [Ochrobactrum intermedium LMG
3301]
Length = 969
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I + R
Sbjct: 882 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKISNATR 940
Query: 177 LSTIKELLFNVL 188
I+ L VL
Sbjct: 941 QGNIRRKLLGVL 952
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 869 PRVEINNTFSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 928
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 929 DLVGHKISNATRQGNIRRKL 948
>gi|152978704|ref|YP_001344333.1| PII uridylyl-transferase [Actinobacillus succinogenes 130Z]
gi|150840427|gb|ABR74398.1| metal dependent phosphohydrolase [Actinobacillus succinogenes 130Z]
Length = 858
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 17/165 (10%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNVID 75
V I N T + + ++ + +V+ + L I A IS+ G+ +D F V +
Sbjct: 667 VKISNRFSQGGTEVFLYCRDQAQLFHKVVTTIGAKKLSIHSAQISTSLDGYVLDTFVVTE 726
Query: 76 CDG---KKIRDKEVIDYIQQRLETDASFAPS-----------LRSSVGVMPTEE--HTSI 119
+G K R +E+ I + L + + +++ V + TE+ HT +
Sbjct: 727 LNGALLKSDRRRELERAITEALTYAENLKRATLHNHKLQPFHVKTEVRFLNTEKETHTEM 786
Query: 120 EFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
E D+ GL +EV + DL+ N++NA+I T ++A +T+
Sbjct: 787 ELVALDKAGLLAEVSQIFGDLNLNLLNAKITTTGEKAEDFFRLTN 831
>gi|398965080|ref|ZP_10680746.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM30]
gi|398147534|gb|EJM36238.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM30]
Length = 900
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG K+IRD + DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDNDGESIGDNPTRIKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITD-AHN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 866 QPLSDPLLCSRLQDAIVEQL 885
>gi|304312446|ref|YP_003812044.1| PII uridylyl-transferase [gamma proteobacterium HdN1]
gi|301798179|emb|CBL46401.1| PII uridylyl-transferase (Uridylyl-removing enzyme) [gamma
proteobacterium HdN1]
Length = 902
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 79/185 (42%), Gaps = 21/185 (11%)
Query: 20 DNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDVFNVIDCDG 78
D AT + + + + + + L +NL I A I++ + +D + +++ G
Sbjct: 711 DERKYQGATQVFIYAKDAPNLFAATVAALTQLNLTIADARIITAANQYTLDTYVIMEEGG 770
Query: 79 KKIRDKEVIDYIQQRLET---------DASFAPSLRSSVGVMPTEE----------HTSI 119
+ D+ I+ I ++L T D P R+ E T +
Sbjct: 771 AAVVDETRIEQIARKLRTTLADPTRFPDIVHRPLPRALKHFRVATEITLANDLDSRATVL 830
Query: 120 EFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLST 179
+ T DRPGL +E+ + + A+I T +RA V ++TD + G + DP+ +T
Sbjct: 831 DITTLDRPGLLAEIGKIFVASGVLIQGAKIATFGERAEDVFYITD-TNGEMLHDPEFCAT 889
Query: 180 IKELL 184
+KE L
Sbjct: 890 LKERL 894
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 46/78 (58%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDC 76
+ + N+ + ATV+ + ++++ G+L ++ ++ ++I+ A I++ G DVF + D
Sbjct: 817 ITLANDLDSRATVLDITTLDRPGLLAEIGKIFVASGVLIQGAKIATFGERAEDVFYITDT 876
Query: 77 DGKKIRDKEVIDYIQQRL 94
+G+ + D E +++RL
Sbjct: 877 NGEMLHDPEFCATLKERL 894
>gi|89075422|ref|ZP_01161839.1| PII uridylyl-transferase [Photobacterium sp. SKA34]
gi|89048838|gb|EAR54408.1| PII uridylyl-transferase [Photobacterium sp. SKA34]
Length = 873
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 17/168 (10%)
Query: 6 AKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
A L + P +++ T + V S +K + V+ L+ NL + A I +S
Sbjct: 672 ALLTHDHDKPLILLSKKATRGGTEVFVYSKDKIKLFAIVVSELDKKNLSVHDAQIMNSKD 731
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRL-----ETDASFAP------SLRSSVGV 110
G+ +D F V+D +GK I R + + + L E AP ++++ V
Sbjct: 732 GYTLDTFMVLDPNGKAINENRHTTIRRTLTKALTVMKSERKIRRAPRKLLHFNVKTKVSF 791
Query: 111 MPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+PT+ + T +E D PGL ++V AV A+ + ++ A+I T +RA
Sbjct: 792 LPTKTGKKTMMELVALDMPGLLAKVGAVFAEHNISLQAAKITTIGERA 839
>gi|224105273|ref|XP_002333837.1| predicted protein [Populus trichocarpa]
gi|222838705|gb|EEE77070.1| predicted protein [Populus trichocarpa]
Length = 411
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 85/183 (46%), Gaps = 14/183 (7%)
Query: 18 VIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDVFNVID 75
++DN T++++ + G+L +++ L D N+ I + YI +D+F ++
Sbjct: 234 IMDNLLSPAHTLVQIVCQDHKGLLYDIMRTLKDYNIQISYGRFYIKHRRTCEIDLF-IMQ 292
Query: 76 CDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFSE 132
DGKKI D + RLE + P + V P E +E +G RP +F +
Sbjct: 293 ADGKKIVDPNKQKALSSRLEMEL-VRPLRVAVVSRGPDTELMVANPVELSGKGRPLVFHD 351
Query: 133 VCAVLADLHCNVVNAEIWTH--NDRAAAVVHV-TDHSTGYAIKDPKRLSTIKELLFNVLR 189
+ L L+ + +AEI DR V V D G A+ P+R I+E ++ +L
Sbjct: 352 ITLALTMLNSCIFSAEIRRRMIGDREFEVYRVLLDEGEGLAV--PRR--KIEEQVWKMLM 407
Query: 190 GYD 192
G++
Sbjct: 408 GWE 410
>gi|330504246|ref|YP_004381115.1| PII uridylyl-transferase [Pseudomonas mendocina NK-01]
gi|328918532|gb|AEB59363.1| PII uridylyl-transferase [Pseudomonas mendocina NK-01]
Length = 898
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V++ T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLMKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG ++IR+ K DY IQ+R+ +FAP + ++
Sbjct: 749 YVVLDADGGSIGNNPARIQQIREGLIEALKNPDDYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E T DRPGL + + + + ++ NA+I T +R V +TD G
Sbjct: 807 HNDAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFITD-DKG 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP+ + ++E + L
Sbjct: 866 QPLSDPEFCARLQEAIIAKL 885
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ T++++ + ++ G+L ++ ++ + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF + D G+ + D E +Q+
Sbjct: 841 SLQNAKIATLGERVEDVFFITDDKGQPLSDPEFCARLQE 879
>gi|238754810|ref|ZP_04616161.1| [Protein-PII] uridylyltransferase [Yersinia ruckeri ATCC 29473]
gi|238706970|gb|EEP99336.1| [Protein-PII] uridylyltransferase [Yersinia ruckeri ATCC 29473]
Length = 892
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 18/159 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ T I + S ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 697 PLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 756
Query: 74 IDCDGKKI-RDKE-VIDYIQQRLETDASF--------APSLR-----SSVGVMPT--EEH 116
++ DG + +D+ VI + ++ T ++ +P LR + V +PT E
Sbjct: 757 LEPDGSPLAQDRHSVIRHALEQAMTQPNYQHPRVRRLSPKLRHFSVPTEVNFLPTHTERR 816
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ +E D+PGL + V + ADL ++ +A I T +R
Sbjct: 817 SYLELIALDQPGLLARVGEIFADLGLSLHSARITTIGER 855
>gi|116747933|ref|YP_844620.1| metal dependent phosphohydrolase [Syntrophobacter fumaroxidans
MPOB]
gi|116696997|gb|ABK16185.1| metal dependent phosphohydrolase [Syntrophobacter fumaroxidans
MPOB]
Length = 864
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 49/84 (58%)
Query: 11 RMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDV 70
R P +V++DN + A T+++V +V++ G+L + + L ++ + I A I++ DV
Sbjct: 769 RTAPSQVLVDNQSSAMYTILEVYTVDRVGLLYTIGRTLFELQIRISVAKITTKIDQVADV 828
Query: 71 FNVIDCDGKKIRDKEVIDYIQQRL 94
F V G+K+ D E ID +++ L
Sbjct: 829 FYVRTHQGEKVSDPEQIDELKRAL 852
>gi|308185738|ref|YP_003929869.1| protein PII uridylyltransferase [Pantoea vagans C9-1]
gi|308056248|gb|ADO08420.1| protein PII uridylyltransferase [Pantoea vagans C9-1]
Length = 884
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 8 LIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGW 66
L+ + P V++ T I + S ++ + V L+ NL + A I +S G
Sbjct: 682 LVHDLKKPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGM 741
Query: 67 FMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDASFAP-------------SLRSSVGV 110
MD F V++ DG + R +I ++Q + T + + P S+ + V
Sbjct: 742 AMDTFIVLEPDGSPLSPDRHPMIIQALEQAI-TQSDWVPPRTRRPSAKLRHFSVDTEVNF 800
Query: 111 MPT--EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+PT + + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 801 LPTHTDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGER 847
>gi|398998506|ref|ZP_10701279.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM21]
gi|398120211|gb|EJM09878.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM21]
Length = 900
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVID--------------YIQQRLETDA---SFAPSLRSSV 108
+ V+D DG I D K++ + IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIREGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELTAPDRPGLLARIGTIFLEFDLSLKNAKIATLGERVEDVFFITD-ANN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ + DP S +++ + + L
Sbjct: 866 HQLSDPLLCSRLQDAIVDQL 885
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DNYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELTAPDRPGLLARIGTIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
+K A I++ G DVF + D + ++ D + +Q
Sbjct: 841 SLKNAKIATLGERVEDVFFITDANNHQLSDPLLCSRLQ 878
>gi|212722976|ref|NP_001132108.1| uncharacterized protein LOC100193524 [Zea mays]
gi|413941849|gb|AFW74498.1| hypothetical protein ZEAMMB73_599986 [Zea mays]
Length = 215
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 86/186 (46%), Gaps = 17/186 (9%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDVFNVI 74
V +DN+ + T+I++ + G+L +++ + D N+ + + Y S +G +D+F V
Sbjct: 36 VTMDNSLSSVHTLIQIQCGDHKGLLYDIMRTVKDGNIQVSYGRFYASQNGRCEIDLFAV- 94
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFS 131
DGKKI D+ + RL + P + V P E +E +G RP +F
Sbjct: 95 QSDGKKILDQHRQRALCCRLRMEL-LRPLRVALVNRGPDTELLVANPVEVSGKGRPLVFY 153
Query: 132 EVCAVLADLHCNVVNAEIWTH--NDRAAAVVHV---TDHSTGYAIKDPKRLSTIKELLFN 186
++ L +L + AEI H DR V + +H A++ S I + + N
Sbjct: 154 DITLALKNLQKRIFLAEIGRHVVEDREWEVYRLHFGEEHELSSALR-----SKIVDEVTN 208
Query: 187 VLRGYD 192
+L G+D
Sbjct: 209 MLMGWD 214
>gi|167032157|ref|YP_001667388.1| PII uridylyl-transferase [Pseudomonas putida GB-1]
gi|189041208|sp|B0KS97.1|GLND_PSEPG RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|166858645|gb|ABY97052.1| UTP-GlnB uridylyltransferase, GlnD [Pseudomonas putida GB-1]
Length = 900
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 25/200 (12%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVIDYIQQRLETDASFAPSLR-------------SSVGVMP 112
+ V+D DG I D K++ D + + L + ++ V ++
Sbjct: 749 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFDFPPQVTILN 808
Query: 113 TEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITD-ADNQP 867
Query: 171 IKDPKRLSTIKELLFNVLRG 190
+ DP+ S ++E + L+
Sbjct: 868 LSDPQLCSRLQEAIVQQLQA 887
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 46/79 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+ T++++ + ++ G+L ++ ++ + +L ++ A I++ G DVF +
Sbjct: 801 PPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 74 IDCDGKKIRDKEVIDYIQQ 92
D D + + D ++ +Q+
Sbjct: 861 TDADNQPLSDPQLCSRLQE 879
>gi|26988321|ref|NP_743746.1| PII uridylyl-transferase [Pseudomonas putida KT2440]
gi|386013537|ref|YP_005931814.1| protein GlnD [Pseudomonas putida BIRD-1]
gi|38257489|sp|Q88MI2.1|GLND_PSEPK RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|24983069|gb|AAN67210.1|AE016348_2 protein-pII uridylyltransferase [Pseudomonas putida KT2440]
gi|313500243|gb|ADR61609.1| GlnD [Pseudomonas putida BIRD-1]
Length = 900
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 25/200 (12%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVIDYIQQRLETDASFAPSLR-------------SSVGVMP 112
+ V+D DG I D K++ D + + L + ++ V ++
Sbjct: 749 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFDFPPQVTILN 808
Query: 113 TEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITD-ADNQP 867
Query: 171 IKDPKRLSTIKELLFNVLRG 190
+ DP+ S ++E + L+
Sbjct: 868 LSDPQLCSRLQEAIVQQLQA 887
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 46/79 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+ T++++ + ++ G+L ++ ++ + +L ++ A I++ G DVF +
Sbjct: 801 PPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 74 IDCDGKKIRDKEVIDYIQQ 92
D D + + D ++ +Q+
Sbjct: 861 TDADNQPLSDPQLCSRLQE 879
>gi|399519985|ref|ZP_10760776.1| protein-P-II uridylyltransferase [Pseudomonas pseudoalcaligenes
CECT 5344]
gi|399112382|emb|CCH37335.1| protein-P-II uridylyltransferase [Pseudomonas pseudoalcaligenes
CECT 5344]
Length = 897
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 88/194 (45%), Gaps = 29/194 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V++ T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLMKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG ++IR+ K DY IQ+R+ +FAP + ++
Sbjct: 749 YVVLDADGGSIGNNPARIQQIREGLIEALKNPDDYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E T DRPGL + + + + ++ NA+I T +R V +TD G
Sbjct: 807 HNDAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFITD-DKG 865
Query: 169 YAIKDPKRLSTIKE 182
+ DP+ + ++E
Sbjct: 866 QPLSDPELCARLQE 879
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 59/113 (52%), Gaps = 12/113 (10%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ T++++ + ++ G+L ++ ++ + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ---RLETDASFAPS 103
++ A I++ G DVF + D G+ + D E+ +Q+ R ++ S P+
Sbjct: 841 SLQNAKIATLGERVEDVFFITDDKGQPLSDPELCARLQETIVRRLSEPSIQPA 893
>gi|386826231|ref|ZP_10113338.1| (protein-PII) uridylyltransferase [Beggiatoa alba B18LD]
gi|386427115|gb|EIJ40943.1| (protein-PII) uridylyltransferase [Beggiatoa alba B18LD]
Length = 899
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 79/193 (40%), Gaps = 22/193 (11%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDVFNVID 75
+V++ + +T V + + + ++ L + I AYI F M F+V++
Sbjct: 691 LVMERHNTQGSTEFTVFAHERDSLFAEITYFLEQQGITIVDAYIIPTQSEFTMAGFSVLE 750
Query: 76 CDGKKIRDKEVIDYIQQRL------ETDASFAPSLRS-----SVGVMPTE---------E 115
G +I D+E ++ I Q L +T F P R +PT +
Sbjct: 751 ESGAEIHDQERVEEILQALKDALSRDTSVPFYPINRRIPRQVKYFTVPTRITFTQDRGND 810
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
HT +E TDRPGL S + + + A I T R V +TD + + +
Sbjct: 811 HTILEVITTDRPGLLSRIAQAFVNCDVRLKKANIATLGSRVEDVFFITDRNN-HLLYSSD 869
Query: 176 RLSTIKELLFNVL 188
+L ++E L VL
Sbjct: 870 QLDALREELSMVL 882
Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 44/81 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P R+ + D T+++V + ++ G+L ++ Q + ++ +KKA I++ G DVF +
Sbjct: 798 PTRITFTQDRGNDHTILEVITTDRPGLLSRIAQAFVNCDVRLKKANIATLGSRVEDVFFI 857
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D + + + +D +++ L
Sbjct: 858 TDRNNHLLYSSDQLDALREEL 878
>gi|414884706|tpg|DAA60720.1| TPA: hypothetical protein ZEAMMB73_962452 [Zea mays]
Length = 418
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 86/186 (46%), Gaps = 17/186 (9%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDVFNVI 74
V +DN+ + T+I++ + G+L +++ + D N+ + + Y S +G +D+F V
Sbjct: 239 VTMDNSLSSVHTLIQIQCGDHKGLLYDIMRTVKDGNIQVSYGRFYASQNGRCEIDLFAV- 297
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFS 131
DGKKI D+ + RL + P + V P E +E +G RP +F
Sbjct: 298 QSDGKKILDQHRQRALCCRLRMEL-LRPLRVALVNRGPDTELLVANPVEVSGKGRPLVFY 356
Query: 132 EVCAVLADLHCNVVNAEIWTH--NDRAAAVVHV---TDHSTGYAIKDPKRLSTIKELLFN 186
++ L +L + AEI H DR V + +H A++ S I + + N
Sbjct: 357 DITLALKNLQKRIFLAEIGRHVVEDREWEVYRLHFGEEHELSSALR-----SKIVDEVTN 411
Query: 187 VLRGYD 192
+L G+D
Sbjct: 412 MLMGWD 417
>gi|339486111|ref|YP_004700639.1| PII uridylyl-transferase [Pseudomonas putida S16]
gi|338836954|gb|AEJ11759.1| PII uridylyl-transferase [Pseudomonas putida S16]
Length = 897
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 25/200 (12%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 686 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 745
Query: 71 FNVIDCDGKKIRD-----KEVIDYIQQRLETDASFAPSLR-------------SSVGVMP 112
+ V+D DG I D K++ D + + L + ++ V ++
Sbjct: 746 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFDFPPQVTILN 805
Query: 113 TEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 806 DAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITD-ADNQP 864
Query: 171 IKDPKRLSTIKELLFNVLRG 190
+ DP+ S ++E + L+
Sbjct: 865 LSDPQLCSRLQEAIVQQLQA 884
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 46/79 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+ T++++ + ++ G+L ++ ++ + +L ++ A I++ G DVF +
Sbjct: 798 PPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 857
Query: 74 IDCDGKKIRDKEVIDYIQQ 92
D D + + D ++ +Q+
Sbjct: 858 TDADNQPLSDPQLCSRLQE 876
>gi|418295712|ref|ZP_12907562.1| PII uridylyl-transferase [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
gi|379067045|gb|EHY79788.1| PII uridylyl-transferase [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
Length = 900
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 25/199 (12%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDT 748
Query: 71 FNVIDCDGKKI-----RDKEV--------------IDYIQQRLETDAS-FAPSLRSSVGV 110
+ V+D DG I R +E+ ++ IQ+R+ FA + ++
Sbjct: 749 YIVLDVDGSPIGNNPERIEEIRRGLITALRNPDDYLNIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
T +E DRPGL + V + D +V NA+I T +R V VTD +
Sbjct: 809 DTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTD-AHNQP 867
Query: 171 IKDPKRLSTIKELLFNVLR 189
+ DP+ +++ L L+
Sbjct: 868 LSDPQFCLRLQQALVKELQ 886
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 3 DEYAKLIRR---------MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R PP+V I N+T T++++ + ++ G+L +V Q+ D +L
Sbjct: 781 DDYLNIIQRRVPRQLKHFAFPPQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
++ A I++ G DVF V D + + D + +QQ L
Sbjct: 841 SVQNAKIATLGERVEDVFFVTDAHNQPLSDPQFCLRLQQAL 881
>gi|110834002|ref|YP_692861.1| PII uridylyl-transferase [Alcanivorax borkumensis SK2]
gi|110647113|emb|CAL16589.1| protein-pII uridylyltransferase [Alcanivorax borkumensis SK2]
Length = 890
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query: 3 DEYAKLIRRMNPPR---------VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D YA + R P R VVI N+ D T + + ++++ G+L + ++ +
Sbjct: 778 DRYASTVSRRMPRRNKHFDVPTQVVISNDIVNDRTAVDIQTLDRPGLLAHIGRIFMRFEI 837
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETD 97
+++ A I++ G DVF + D DG+ + D + +QQ L+ +
Sbjct: 838 LVQNARIATLGERAEDVFFITDLDGEPVSDPTLCQELQQTLKQE 881
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 85/203 (41%), Gaps = 27/203 (13%)
Query: 8 LIRRMNP--PRVVI---DNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YIS 61
L+ R +P P V+I + A + I + + + + + ++ + L I A I+
Sbjct: 677 LLDREDPEDPLVLIRESSQSVLAGGSQIFIYTPDTRNLFSATVNAIDSLGLTIMDARIIT 736
Query: 62 SDGGWFMDVFNVIDCDGKKI-RDKEVIDYIQQRLETDASFAPSLRSSVGV---------- 110
S G+ +D + V+D G I D I+ I++ L + S+V
Sbjct: 737 SVDGFSLDTYIVLDEQGTPIGEDWARIEQIRKTLTETLKYPDRYASTVSRRMPRRNKHFD 796
Query: 111 MPTE---------EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH 161
+PT+ + T+++ DRPGL + + + V NA I T +RA V
Sbjct: 797 VPTQVVISNDIVNDRTAVDIQTLDRPGLLAHIGRIFMRFEILVQNARIATLGERAEDVFF 856
Query: 162 VTDHSTGYAIKDPKRLSTIKELL 184
+TD G + DP +++ L
Sbjct: 857 ITDLD-GEPVSDPTLCQELQQTL 878
>gi|431801156|ref|YP_007228059.1| PII uridylyl-transferase [Pseudomonas putida HB3267]
gi|430791921|gb|AGA72116.1| PII uridylyl-transferase [Pseudomonas putida HB3267]
Length = 900
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 25/200 (12%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVIDYIQQRLETDASFAPSLR-------------SSVGVMP 112
+ V+D DG I D K++ D + + L + ++ V ++
Sbjct: 749 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFDFPPQVTILN 808
Query: 113 TEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITD-ADNQP 867
Query: 171 IKDPKRLSTIKELLFNVLRG 190
+ DP+ S ++E + L+
Sbjct: 868 LSDPQLCSRLQEAIVQQLQA 887
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 46/79 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+ T++++ + ++ G+L ++ ++ + +L ++ A I++ G DVF +
Sbjct: 801 PPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 74 IDCDGKKIRDKEVIDYIQQ 92
D D + + D ++ +Q+
Sbjct: 861 TDADNQPLSDPQLCSRLQE 879
>gi|409393661|ref|ZP_11244961.1| PII uridylyl-transferase [Pseudomonas sp. Chol1]
gi|409393804|ref|ZP_11245087.1| PII uridylyl-transferase [Pseudomonas sp. Chol1]
gi|409121642|gb|EKM97708.1| PII uridylyl-transferase [Pseudomonas sp. Chol1]
gi|409121803|gb|EKM97865.1| PII uridylyl-transferase [Pseudomonas sp. Chol1]
Length = 900
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 79/188 (42%), Gaps = 27/188 (14%)
Query: 13 NPPRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-M 68
N P V+I T + T I + + ++H + ++ +NL I A I + F +
Sbjct: 687 NGPLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTL 746
Query: 69 DVFNVIDCDGKKIRD-KEVIDYIQQRLETDA--------------------SFAPSLRSS 107
D + V+D DG I D +E I+ I+Q L DA FA + +
Sbjct: 747 DTYIVLDADGTPIGDNRERIEEIRQGL-IDAVRNPDEYLTIIQRHVPRQLKHFAFPPQVT 805
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+ T IE DRPGL + V + +V NA+I T +R V VT+ +
Sbjct: 806 IHNDTQRPQTIIEIIAPDRPGLLARVGQLFLAFDLSVQNAKIATLGERVEDVFFVTN-AD 864
Query: 168 GYAIKDPK 175
+ DP+
Sbjct: 865 NQPLSDPQ 872
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 3 DEYAKLIRR---------MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
DEY +I+R PP+V I N+T T+I++ + ++ G+L +V Q+ +L
Sbjct: 781 DEYLTIIQRHVPRQLKHFAFPPQVTIHNDTQRPQTIIEIIAPDRPGLLARVGQLFLAFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEV 86
++ A I++ G DVF V + D + + D ++
Sbjct: 841 SVQNAKIATLGERVEDVFFVTNADNQPLSDPQL 873
>gi|254501628|ref|ZP_05113779.1| protein-P-II uridylyltransferase [Labrenzia alexandrii DFL-11]
gi|222437699|gb|EEE44378.1| protein-P-II uridylyltransferase [Labrenzia alexandrii DFL-11]
Length = 945
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 47/78 (60%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDC 76
V+++N D TV++V +++ G+L + + + +NL I A+IS+ G +DVF V D
Sbjct: 843 VLLNNTLSDDYTVLEVSGLDRPGLLYDLTRSIATLNLNIGSAHISTFGEKVVDVFYVTDL 902
Query: 77 DGKKIRDKEVIDYIQQRL 94
G+KI + + I++RL
Sbjct: 903 TGQKIANIGRQEIIRERL 920
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++++T +E +G DRPGL ++ +A L+ N+ +A I T ++ V +VTD TG I
Sbjct: 850 SDDYTVLEVSGLDRPGLLYDLTRSIATLNLNIGSAHISTFGEKVVDVFYVTD-LTGQKIA 908
Query: 173 DPKRLSTIKELLFNVLRG 190
+ R I+E L + G
Sbjct: 909 NIGRQEIIRERLSAAVEG 926
>gi|395445036|ref|YP_006385289.1| PII uridylyl-transferase [Pseudomonas putida ND6]
gi|388559033|gb|AFK68174.1| PII uridylyl-transferase [Pseudomonas putida ND6]
Length = 897
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 25/200 (12%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 686 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 745
Query: 71 FNVIDCDGKKIRD-----KEVIDYIQQRLETDASFAPSLR-------------SSVGVMP 112
+ V+D DG I D K++ D + + L + ++ V ++
Sbjct: 746 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFDFPPQVTILN 805
Query: 113 TEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 806 DAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITD-ADNQP 864
Query: 171 IKDPKRLSTIKELLFNVLRG 190
+ DP+ S ++E + L+
Sbjct: 865 LSDPQLCSRLQEAIVQQLQA 884
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 46/79 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+ T++++ + ++ G+L ++ ++ + +L ++ A I++ G DVF +
Sbjct: 798 PPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 857
Query: 74 IDCDGKKIRDKEVIDYIQQ 92
D D + + D ++ +Q+
Sbjct: 858 TDADNQPLSDPQLCSRLQE 876
>gi|389683284|ref|ZP_10174616.1| protein-P-II uridylyltransferase [Pseudomonas chlororaphis O6]
gi|388552797|gb|EIM16058.1| protein-P-II uridylyltransferase [Pseudomonas chlororaphis O6]
Length = 900
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 92/219 (42%), Gaps = 34/219 (15%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDAS-FAPSLRSSVGV 110
+ V+D DG K+IRD + DY IQ+R+ FA + ++
Sbjct: 749 YIVLDNDGGSIGNNPQRVKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-ANNQQ 867
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNR 209
+ DP+ S +++ + L S PP + R
Sbjct: 868 LSDPQLCSRLQDAIVEQL---------SVSHEPPTALTR 897
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRR---------MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R PP+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFPPQVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D + +++ D ++ +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDANNQQLSDPQLCSRLQ 878
>gi|255585359|ref|XP_002533376.1| amino acid binding protein, putative [Ricinus communis]
gi|223526783|gb|EEF29007.1| amino acid binding protein, putative [Ricinus communis]
Length = 413
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 83/188 (44%), Gaps = 14/188 (7%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDV 70
NP V +DN T+++ + G++ +++ L D N+ I + Y + G +D+
Sbjct: 232 NPVSVSMDNTLSRSHTLLQFLCKDHKGLMYDIMRTLKDYNIQISYGRFYATPKGHCEVDL 291
Query: 71 FNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRP 127
F ++ DGKKI D D + RL + P + V P E +E + RP
Sbjct: 292 F-IMQADGKKIIDSYKQDALCSRLRMEL-LRPLRVAVVSRGPDTELLVANPVELSERGRP 349
Query: 128 GLFSEVCAVLADLHCNVVNAEIWTH--NDRAAAVVHV-TDHSTGYAIKDPKRLSTIKELL 184
+F ++ L L+ + + EI H +DR V + D G+ + K I+E +
Sbjct: 350 LVFYDITLALKILNTRIFSVEIGRHMIHDREWEVYRILLDEGDGFTVPRNK----IEESV 405
Query: 185 FNVLRGYD 192
L G+D
Sbjct: 406 RKRLMGWD 413
>gi|118591469|ref|ZP_01548866.1| PII uridylyl-transferase [Stappia aggregata IAM 12614]
gi|118435797|gb|EAV42441.1| PII uridylyl-transferase [Stappia aggregata IAM 12614]
Length = 944
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
++++T +E +G DRPGL ++ +A L+ N+ +A I T ++ V +VTD TG I
Sbjct: 849 SDDYTVLEISGLDRPGLLYDLTRSIATLNLNIGSAHISTFGEKVVDVFYVTD-LTGQKIA 907
Query: 173 DPKRLSTIKELLFNVLRGY 191
+ R I+E L + + G+
Sbjct: 908 NIGRQEIIRERLADAVEGH 926
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDC 76
V+++N D TV+++ +++ G+L + + + +NL I A+IS+ G +DVF V D
Sbjct: 842 VLVNNALSDDYTVLEISGLDRPGLLYDLTRSIATLNLNIGSAHISTFGEKVVDVFYVTDL 901
Query: 77 DGKKIRDKEVIDYIQQRL 94
G+KI + + I++RL
Sbjct: 902 TGQKIANIGRQEIIRERL 919
>gi|432552204|ref|ZP_19788938.1| [protein-PII] uridylyltransferase [Escherichia coli KTE47]
gi|431087903|gb|ELD93824.1| [protein-PII] uridylyltransferase [Escherichia coli KTE47]
Length = 890
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ PRV++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPRVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLIQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|306842568|ref|ZP_07475219.1| protein-P-II uridylyltransferase [Brucella sp. BO2]
gi|306287424|gb|EFM58904.1| protein-P-II uridylyltransferase [Brucella sp. BO2]
Length = 858
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 99 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 158
+F R + + + T IE G DRPGL SE+ +++DL ++ +A I T ++
Sbjct: 753 AFKVEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVID 812
Query: 159 VVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+VTD G+ I + R IK L +L
Sbjct: 813 SFYVTD-LVGHKISNATRQGNIKRKLLALL 841
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 758 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 817
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 818 DLVGHKISNATRQGNIKRKL 837
>gi|148549394|ref|YP_001269496.1| PII uridylyl-transferase [Pseudomonas putida F1]
gi|397695319|ref|YP_006533200.1| [Protein-PII] uridylyltransferase [Pseudomonas putida DOT-T1E]
gi|421522651|ref|ZP_15969292.1| PII uridylyl-transferase [Pseudomonas putida LS46]
gi|166990446|sp|A5W852.1|GLND_PSEP1 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|148513452|gb|ABQ80312.1| metal dependent phosphohydrolase [Pseudomonas putida F1]
gi|397332049|gb|AFO48408.1| [Protein-PII] uridylyltransferase [Pseudomonas putida DOT-T1E]
gi|402753751|gb|EJX14244.1| PII uridylyl-transferase [Pseudomonas putida LS46]
Length = 900
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 25/200 (12%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVIDYIQQRLETDASFAPSLR-------------SSVGVMP 112
+ V+D DG I D K++ D + + L + ++ V ++
Sbjct: 749 YIVLDNDGGSIGDNPQRVKQIRDGLTEALRNPEDYPTIIQRRVPRQLKHFDFPPQVTILN 808
Query: 113 TEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITD-ADNQP 867
Query: 171 IKDPKRLSTIKELLFNVLRG 190
+ DP+ S ++E + L+
Sbjct: 868 LSDPQLCSRLQEAIVQQLQA 887
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 46/79 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+ T++++ + ++ G+L ++ ++ + +L ++ A I++ G DVF +
Sbjct: 801 PPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 74 IDCDGKKIRDKEVIDYIQQ 92
D D + + D ++ +Q+
Sbjct: 861 TDADNQPLSDPQLCSRLQE 879
>gi|265983322|ref|ZP_06096057.1| uridylyltransferase [Brucella sp. 83/13]
gi|306839592|ref|ZP_07472396.1| protein-P-II uridylyltransferase [Brucella sp. NF 2653]
gi|264661914|gb|EEZ32175.1| uridylyltransferase [Brucella sp. 83/13]
gi|306405290|gb|EFM61565.1| protein-P-II uridylyltransferase [Brucella sp. NF 2653]
Length = 934
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 99 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 158
+F R + + + T IE G DRPGL SE+ +++DL ++ +A I T ++
Sbjct: 829 AFKVEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVID 888
Query: 159 VVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+VTD G+ I + R IK L +L
Sbjct: 889 SFYVTD-LVGHKISNATRQGNIKRKLLALL 917
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
>gi|307129818|ref|YP_003881834.1| uridylyltransferase/uridylyl-removing enzyme [Dickeya dadantii
3937]
gi|306527347|gb|ADM97277.1| uridylyltransferase/uridylyl-removing enzyme [Dickeya dadantii
3937]
Length = 893
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 18/171 (10%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P V+I + T I + S ++ + V L+ NL + A I +S G MD
Sbjct: 693 VNKPMVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 752
Query: 71 FNVIDCDGKKI---RDKEVIDYIQQRLETDASFAPSLR------------SSVGVMPT-- 113
F V++ DG + R + I+Q L P +R + VG +PT
Sbjct: 753 FIVLEPDGSPLAPDRHDMIRHAIEQALTQRDYQHPRVRRPSSRLRHFSVPTEVGFLPTHT 812
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ + +E D+PGL + V V ADL+ ++ A I T +R + + D
Sbjct: 813 DRRSYMELIALDQPGLLARVGEVFADLNLSLHGARISTIGERVEDLFILAD 863
>gi|261324258|ref|ZP_05963455.1| uridylyltransferase [Brucella neotomae 5K33]
gi|261300238|gb|EEY03735.1| uridylyltransferase [Brucella neotomae 5K33]
Length = 934
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 99 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 158
+F R + + + T IE G DRPGL SE+ +++DL ++ +A I T ++
Sbjct: 829 AFKVEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVID 888
Query: 159 VVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+VTD G+ I + R IK L +L
Sbjct: 889 SFYVTD-LVGHKISNATRQGNIKRKLLALL 917
>gi|265987872|ref|ZP_06100429.1| uridylyltransferase [Brucella pinnipedialis M292/94/1]
gi|264660069|gb|EEZ30330.1| uridylyltransferase [Brucella pinnipedialis M292/94/1]
Length = 934
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 99 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 158
+F R + + + T IE G DRPGL SE+ +++DL ++ +A I T ++
Sbjct: 829 AFKVEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVID 888
Query: 159 VVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+VTD G+ I + R IK L +L
Sbjct: 889 SFYVTD-LVGHKISNATRQGNIKRKLLALL 917
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
>gi|261316802|ref|ZP_05955999.1| uridylyltransferase [Brucella pinnipedialis B2/94]
gi|340789768|ref|YP_004755232.1| PII uridylyl-transferase [Brucella pinnipedialis B2/94]
gi|261296025|gb|EEX99521.1| uridylyltransferase [Brucella pinnipedialis B2/94]
gi|340558226|gb|AEK53464.1| PII uridylyl-transferase [Brucella pinnipedialis B2/94]
Length = 934
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 99 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 158
+F R + + + T IE G DRPGL SE+ +++DL ++ +A I T ++
Sbjct: 829 AFKVEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVID 888
Query: 159 VVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+VTD G+ I + R IK L +L
Sbjct: 889 SFYVTD-LVGHKISNATRQGNIKRKLLALL 917
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
>gi|225851679|ref|YP_002731912.1| PII uridylyl-transferase [Brucella melitensis ATCC 23457]
gi|256264811|ref|ZP_05467343.1| uridylyltransferase [Brucella melitensis bv. 2 str. 63/9]
gi|384210514|ref|YP_005599596.1| protein-P-II uridylyltransferase [Brucella melitensis M5-90]
gi|384407618|ref|YP_005596239.1| PII uridylyl-transferase [Brucella melitensis M28]
gi|384444233|ref|YP_005602952.1| protein-P-II uridylyltransferase [Brucella melitensis NI]
gi|254798829|sp|C0RGK0.1|GLND_BRUMB RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|225640044|gb|ACN99957.1| protein-P-II uridylyltransferase [Brucella melitensis ATCC 23457]
gi|263095221|gb|EEZ18890.1| uridylyltransferase [Brucella melitensis bv. 2 str. 63/9]
gi|326408165|gb|ADZ65230.1| PII uridylyl-transferase [Brucella melitensis M28]
gi|326537877|gb|ADZ86092.1| protein-P-II uridylyltransferase [Brucella melitensis M5-90]
gi|349742229|gb|AEQ07772.1| protein-P-II uridylyltransferase [Brucella melitensis NI]
Length = 934
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 99 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 158
+F R + + + T IE G DRPGL SE+ +++DL ++ +A I T ++
Sbjct: 829 AFKVEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVID 888
Query: 159 VVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+VTD G+ I + R IK L +L
Sbjct: 889 SFYVTD-LVGHKISNATRQGNIKRKLLALL 917
>gi|162451413|ref|YP_001613780.1| protein-PII uridylyltransferase [Sorangium cellulosum So ce56]
gi|161161995|emb|CAN93300.1| probable protein-PII uridylyltransferase [Sorangium cellulosum So
ce56]
Length = 953
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 102 PSLRSSVGVMP-TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVV 160
P +R+ + + HT IE DRPGL + L L ++ A+I T R A V
Sbjct: 857 PKVRTQISIDDRASHHTVIEVLTRDRPGLLFAISDALYQLGLSISVAKINTEGTRVADVF 916
Query: 161 HVTDHSTGYAIKDPKRLSTIKELLFNVLRGYD 192
+V+D + G I + KR ++E L VL+G D
Sbjct: 917 YVSD-ADGTKIANGKRTQEVEERLHAVLQGLD 947
Score = 40.8 bits (94), Expect = 0.68, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVI 87
TVI+V + ++ G+L + L + L I A I+++G DVF V D DG KI + +
Sbjct: 873 TVIEVLTRDRPGLLFAISDALYQLGLSISVAKINTEGTRVADVFYVSDADGTKIANGKRT 932
Query: 88 DYIQQRL 94
+++RL
Sbjct: 933 QEVEERL 939
>gi|148560425|ref|YP_001258178.1| PII uridylyl-transferase [Brucella ovis ATCC 25840]
gi|166226141|sp|A5VN81.1|GLND_BRUO2 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|148371682|gb|ABQ61661.1| protein-P-II uridylyltransferase [Brucella ovis ATCC 25840]
Length = 934
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 99 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 158
+F R + + + T IE G DRPGL SE+ +++DL ++ +A I T ++
Sbjct: 829 AFKVEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVID 888
Query: 159 VVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+VTD G+ I + R IK L +L
Sbjct: 889 SFYVTD-LVGHKISNATRQGNIKRKLLALL 917
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
>gi|260885020|ref|ZP_05896634.1| uridylyltransferase [Brucella abortus bv. 9 str. C68]
gi|297247538|ref|ZP_06931256.1| protein-P-II uridylyltransferase [Brucella abortus bv. 5 str.
B3196]
gi|260874548|gb|EEX81617.1| uridylyltransferase [Brucella abortus bv. 9 str. C68]
gi|297174707|gb|EFH34054.1| protein-P-II uridylyltransferase [Brucella abortus bv. 5 str.
B3196]
Length = 934
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 99 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 158
+F R + + + T IE G DRPGL SE+ +++DL ++ +A I T ++
Sbjct: 829 AFKVEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVID 888
Query: 159 VVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+VTD G+ I + R IK L +L
Sbjct: 889 SFYVTD-LVGHKISNATRQGNIKRKLLALL 917
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
>gi|254429939|ref|ZP_05043646.1| protein-P-II uridylyltransferase [Alcanivorax sp. DG881]
gi|196196108|gb|EDX91067.1| protein-P-II uridylyltransferase [Alcanivorax sp. DG881]
Length = 890
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query: 3 DEYAKLIRRMNPPR---------VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D YA + R P R VVI N+ D T + + ++++ G+L + ++ +
Sbjct: 778 DRYATTVSRRMPRRNKHFDVPTQVVISNDIVNDRTAVDIQTLDRPGLLAHIGRIFMRFEI 837
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETD 97
+++ A I++ G DVF + D DG+ + D + +QQ L+ +
Sbjct: 838 LVQNARIATLGERAEDVFFITDLDGEPVSDPTLCQELQQTLKQE 881
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 85/203 (41%), Gaps = 27/203 (13%)
Query: 8 LIRRMNP--PRVVI---DNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YIS 61
L+ R +P P V+I + A + I + + + + + L+ + L I A I+
Sbjct: 677 LLDREDPDDPLVLIRESSQSVLAGGSQIFIYTPDTRNLFSATVNALDSLGLTIMDARIIT 736
Query: 62 SDGGWFMDVFNVIDCDGKKI-RDKEVIDYIQQRLETDASFAPSLRSSVGV---------- 110
S G+ +D + V+D G I D I+ I++ L + ++V
Sbjct: 737 SVDGFSLDTYIVLDEHGTPIGEDWARIEQIRKTLTETLKYPDRYATTVSRRMPRRNKHFD 796
Query: 111 MPTE---------EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH 161
+PT+ + T+++ DRPGL + + + V NA I T +RA V
Sbjct: 797 VPTQVVISNDIVNDRTAVDIQTLDRPGLLAHIGRIFMRFEILVQNARIATLGERAEDVFF 856
Query: 162 VTDHSTGYAIKDPKRLSTIKELL 184
+TD G + DP +++ L
Sbjct: 857 ITDLD-GEPVSDPTLCQELQQTL 878
>gi|163842415|ref|YP_001626819.1| PII uridylyl-transferase [Brucella suis ATCC 23445]
gi|189041205|sp|B0CIQ3.1|GLND_BRUSI RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|163673138|gb|ABY37249.1| protein-P-II uridylyltransferase [Brucella suis ATCC 23445]
Length = 934
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 99 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 158
+F R + + + T IE G DRPGL SE+ +++DL ++ +A I T ++
Sbjct: 829 AFKVEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVID 888
Query: 159 VVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+VTD G+ I + R IK L +L
Sbjct: 889 SFYVTD-LVGHKISNATRQGNIKRKLLALL 917
>gi|449484539|ref|XP_004156910.1| PREDICTED: LOW QUALITY PROTEIN: glycogen phosphorylase 1-like
[Cucumis sativus]
Length = 954
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P + +DN+ D+T + + N+ G+L + +V + L I KA + +G +F F V
Sbjct: 61 PTISVDNSEEDDSTAFVIRARNRIGLLQVITRVFKVLGLSIDKATVEFEGEYFTKTFFVS 120
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + E ID I++ L
Sbjct: 121 DSHGNKIENLESIDRIKKAL 140
>gi|17988087|ref|NP_540721.1| PII uridylyl-transferase [Brucella melitensis bv. 1 str. 16M]
gi|62289122|ref|YP_220915.1| PII uridylyl-transferase [Brucella abortus bv. 1 str. 9-941]
gi|82699061|ref|YP_413635.1| PII uridylyl-transferase [Brucella melitensis biovar Abortus 2308]
gi|189023397|ref|YP_001934165.1| PII uridylyl-transferase [Brucella abortus S19]
gi|225626684|ref|ZP_03784723.1| protein-P-II uridylyltransferase [Brucella ceti str. Cudo]
gi|237814613|ref|ZP_04593611.1| protein-P-II uridylyltransferase [Brucella abortus str. 2308 A]
gi|260546419|ref|ZP_05822159.1| uridylyltransferase [Brucella abortus NCTC 8038]
gi|260563217|ref|ZP_05833703.1| uridylyltransferase [Brucella melitensis bv. 1 str. 16M]
gi|260756000|ref|ZP_05868348.1| uridylyltransferase [Brucella abortus bv. 6 str. 870]
gi|260759224|ref|ZP_05871572.1| uridylyltransferase [Brucella abortus bv. 4 str. 292]
gi|260760946|ref|ZP_05873289.1| uridylyltransferase [Brucella abortus bv. 2 str. 86/8/59]
gi|261215276|ref|ZP_05929557.1| uridylyltransferase [Brucella abortus bv. 3 str. Tulya]
gi|261221372|ref|ZP_05935653.1| uridylyltransferase [Brucella ceti B1/94]
gi|261314640|ref|ZP_05953837.1| uridylyltransferase [Brucella pinnipedialis M163/99/10]
gi|261759259|ref|ZP_06002968.1| uridylyltransferase [Brucella sp. F5/99]
gi|265992346|ref|ZP_06104903.1| uridylyltransferase [Brucella melitensis bv. 1 str. Rev.1]
gi|265994089|ref|ZP_06106646.1| uridylyltransferase [Brucella melitensis bv. 3 str. Ether]
gi|265997332|ref|ZP_06109889.1| uridylyltransferase [Brucella ceti M490/95/1]
gi|376271945|ref|YP_005150523.1| uridylyltransferase [Brucella abortus A13334]
gi|423167714|ref|ZP_17154417.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI435a]
gi|423169910|ref|ZP_17156585.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI474]
gi|423175099|ref|ZP_17161768.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI486]
gi|423178050|ref|ZP_17164695.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI488]
gi|423179343|ref|ZP_17165984.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI010]
gi|423182473|ref|ZP_17169110.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI016]
gi|423186584|ref|ZP_17173198.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI021]
gi|423190978|ref|ZP_17177586.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI259]
gi|22256763|sp|Q8YES3.1|GLND_BRUME RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|75497477|sp|Q57FN0.1|GLND_BRUAB RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|91206741|sp|Q2YNZ1.1|GLND_BRUA2 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|238689407|sp|B2S8D8.1|GLND_BRUA1 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|17983838|gb|AAL52985.1| [protein-pii] uridylyltransferase [Brucella melitensis bv. 1 str.
16M]
gi|62195254|gb|AAX73554.1| [protein-pII] uridylyltransferase, hypothetical [Brucella abortus
bv. 1 str. 9-941]
gi|82615162|emb|CAJ10099.1| Amino acid-binding ACT:Metal dependent phosphohydrolase, HD
region:Metal-dependent phosphohydrolase, HD region
[Brucella melitensis biovar Abortus 2308]
gi|189018969|gb|ACD71691.1| PII uridylyl-transferase [Brucella abortus S19]
gi|225618341|gb|EEH15384.1| protein-P-II uridylyltransferase [Brucella ceti str. Cudo]
gi|237789450|gb|EEP63660.1| protein-P-II uridylyltransferase [Brucella abortus str. 2308 A]
gi|260096526|gb|EEW80402.1| uridylyltransferase [Brucella abortus NCTC 8038]
gi|260153233|gb|EEW88325.1| uridylyltransferase [Brucella melitensis bv. 1 str. 16M]
gi|260669542|gb|EEX56482.1| uridylyltransferase [Brucella abortus bv. 4 str. 292]
gi|260671378|gb|EEX58199.1| uridylyltransferase [Brucella abortus bv. 2 str. 86/8/59]
gi|260676108|gb|EEX62929.1| uridylyltransferase [Brucella abortus bv. 6 str. 870]
gi|260916883|gb|EEX83744.1| uridylyltransferase [Brucella abortus bv. 3 str. Tulya]
gi|260919956|gb|EEX86609.1| uridylyltransferase [Brucella ceti B1/94]
gi|261303666|gb|EEY07163.1| uridylyltransferase [Brucella pinnipedialis M163/99/10]
gi|261739243|gb|EEY27239.1| uridylyltransferase [Brucella sp. F5/99]
gi|262551800|gb|EEZ07790.1| uridylyltransferase [Brucella ceti M490/95/1]
gi|262765070|gb|EEZ10991.1| uridylyltransferase [Brucella melitensis bv. 3 str. Ether]
gi|263003412|gb|EEZ15705.1| uridylyltransferase [Brucella melitensis bv. 1 str. Rev.1]
gi|363399551|gb|AEW16521.1| uridylyltransferase [Brucella abortus A13334]
gi|374537330|gb|EHR08843.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI486]
gi|374541148|gb|EHR12647.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI435a]
gi|374542146|gb|EHR13635.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI474]
gi|374547534|gb|EHR18988.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI488]
gi|374550862|gb|EHR22297.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI010]
gi|374551319|gb|EHR22753.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI016]
gi|374553668|gb|EHR25082.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI259]
gi|374558263|gb|EHR29657.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI021]
Length = 934
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 99 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 158
+F R + + + T IE G DRPGL SE+ +++DL ++ +A I T ++
Sbjct: 829 AFKVEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVID 888
Query: 159 VVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+VTD G+ I + R IK L +L
Sbjct: 889 SFYVTD-LVGHKISNATRQGNIKRKLLALL 917
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
>gi|261218146|ref|ZP_05932427.1| uridylyltransferase [Brucella ceti M13/05/1]
gi|261321007|ref|ZP_05960204.1| uridylyltransferase [Brucella ceti M644/93/1]
gi|260923235|gb|EEX89803.1| uridylyltransferase [Brucella ceti M13/05/1]
gi|261293697|gb|EEX97193.1| uridylyltransferase [Brucella ceti M644/93/1]
Length = 934
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 99 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 158
+F R + + + T IE G DRPGL SE+ +++DL ++ +A I T ++
Sbjct: 829 AFKVEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVID 888
Query: 159 VVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+VTD G+ I + R IK L +L
Sbjct: 889 SFYVTD-LVGHKISNATRQGNIKRKLLALL 917
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
>gi|161618133|ref|YP_001592020.1| PII uridylyl-transferase [Brucella canis ATCC 23365]
gi|376275082|ref|YP_005115521.1| protein-P-II uridylyltransferase [Brucella canis HSK A52141]
gi|161334944|gb|ABX61249.1| protein-P-II uridylyltransferase [Brucella canis ATCC 23365]
gi|363403649|gb|AEW13944.1| protein-P-II uridylyltransferase [Brucella canis HSK A52141]
Length = 934
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 99 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 158
+F R + + + T IE G DRPGL SE+ +++DL ++ +A I T ++
Sbjct: 829 AFKVEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVID 888
Query: 159 VVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+VTD G+ I + R IK L +L
Sbjct: 889 SFYVTD-LVGHKISNATRQGNIKRKLLALL 917
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
>gi|261756034|ref|ZP_05999743.1| uridylyltransferase [Brucella suis bv. 3 str. 686]
gi|261745787|gb|EEY33713.1| uridylyltransferase [Brucella suis bv. 3 str. 686]
Length = 675
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 575 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 634
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 635 DLVGHKISNATRQGNIKRKL 654
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I + R
Sbjct: 588 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKISNATR 646
Query: 177 LSTIKELLFNVL 188
IK L +L
Sbjct: 647 QGNIKRKLLALL 658
>gi|357510825|ref|XP_003625701.1| hypothetical protein MTR_7g102330 [Medicago truncatula]
gi|355500716|gb|AES81919.1| hypothetical protein MTR_7g102330 [Medicago truncatula]
Length = 405
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 9/153 (5%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD--GGWFMDVFNVI 74
+V+DN T++++ + G+L +++ L D N+ I S G +D+F ++
Sbjct: 228 IVMDNTLSPAHTLVQIMCQDHKGLLYDIMRTLKDFNIQISYGRFSKKPRGKCEIDLF-IM 286
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFS 131
DGKKI D + + RL+T+ P + V P + +E +G RP +F
Sbjct: 287 QVDGKKIVDPSKKESLSSRLKTEL-LRPLRVAVVSRGPDTQLLVANPVELSGKGRPLVFY 345
Query: 132 EVCAVLADLHCNVVNAEIWTH--NDRAAAVVHV 162
++ L L + +AE+ H DR V V
Sbjct: 346 DITLALKMLGLCIFSAEVGRHVIGDRECEVYRV 378
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 78/179 (43%), Gaps = 24/179 (13%)
Query: 25 ADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDK 84
+ T+I V+ +K G+ + +++ +L I +A +S+DG W VF V+ ++K
Sbjct: 18 GETTIITVNCPDKTGLGSDLCRIILLFHLTILRADVSTDGKWCYIVFWVVG------KEK 71
Query: 85 EVIDYIQQRLETDASFAPSLRSSVGV---------MPTEEHTSIEFTGTDRPGLFSEVCA 135
+++RL + P+ S+ G + ++F DR GL +V
Sbjct: 72 TRWSLLKKRL---IAACPTCSSASGFSYFCSDLQNQKPPDVFLLKFCCKDRKGLLHDVTE 128
Query: 136 VLADLHCNVVNAEIWTHND-RAAAVVHVTD-----HSTGYAIKDPKRLSTIKELLFNVL 188
VL +L + ++ T D + + +TD H+ ++L+T+ E F +
Sbjct: 129 VLCELELTIKKVKVSTTPDGKVLDLFFITDTRELLHTEKRKDDTIEKLTTVLEDFFTTI 187
>gi|260567217|ref|ZP_05837687.1| uridylyltransferase [Brucella suis bv. 4 str. 40]
gi|260156735|gb|EEW91815.1| uridylyltransferase [Brucella suis bv. 4 str. 40]
Length = 934
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 99 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 158
+F R + + + T IE G DRPGL SE+ +++DL ++ +A I T ++
Sbjct: 829 AFKVEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVID 888
Query: 159 VVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+VTD G+ I + R IK L +L
Sbjct: 889 SFYVTD-LVGHKISNATRQGNIKRKLLALL 917
>gi|256368608|ref|YP_003106114.1| PII uridylyl-transferase [Brucella microti CCM 4915]
gi|255998766|gb|ACU47165.1| protein-P-II uridylyl-transferase [Brucella microti CCM 4915]
Length = 934
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 99 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 158
+F R + + + T IE G DRPGL SE+ +++DL ++ +A I T ++
Sbjct: 829 AFKVEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVID 888
Query: 159 VVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+VTD G+ I + R IK L +L
Sbjct: 889 SFYVTD-LVGHKISNATRQGNIKRKLLALL 917
>gi|449457765|ref|XP_004146618.1| PREDICTED: glycogen phosphorylase 1-like [Cucumis sativus]
Length = 954
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P + +DN+ D+T + + N+ G+L + +V + L I KA + +G +F F V
Sbjct: 61 PTISVDNSEEDDSTAFVIRARNRIGLLQVITRVFKVLGLSIDKATVEFEGEYFTKTFFVS 120
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + E ID I++ L
Sbjct: 121 DSHGNKIENLESIDRIKKAL 140
>gi|23501056|ref|NP_697183.1| PII uridylyl-transferase [Brucella suis 1330]
gi|376279844|ref|YP_005153850.1| PII uridylyl-transferase [Brucella suis VBI22]
gi|384223838|ref|YP_005615002.1| PII uridylyl-transferase [Brucella suis 1330]
gi|30173076|sp|Q8G312.1|GLND_BRUSU RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|23346922|gb|AAN29098.1| [protein-pII] uridylyltransferase, putative [Brucella suis 1330]
gi|343382018|gb|AEM17510.1| PII uridylyl-transferase [Brucella suis 1330]
gi|358257443|gb|AEU05178.1| PII uridylyl-transferase [Brucella suis VBI22]
Length = 934
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 99 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 158
+F R + + + T IE G DRPGL SE+ +++DL ++ +A I T ++
Sbjct: 829 AFKVEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVID 888
Query: 159 VVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+VTD G+ I + R IK L +L
Sbjct: 889 SFYVTD-LVGHKISNATRQGNIKRKLLALL 917
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
>gi|398957202|ref|ZP_10677152.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM33]
gi|398148649|gb|EJM37319.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM33]
Length = 900
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVID--------------YIQQRLETDA---SFAPSLRSSV 108
+ V+D DG I D K++ D IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIRDGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-AHN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 866 QPLSDPLLCSRLQDAIVEQL 885
>gi|306844413|ref|ZP_07477003.1| protein-P-II uridylyltransferase [Brucella inopinata BO1]
gi|306275226|gb|EFM56976.1| protein-P-II uridylyltransferase [Brucella inopinata BO1]
Length = 934
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I + R
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKISNATR 905
Query: 177 LSTIKELLFNVL 188
IK L +L
Sbjct: 906 QGNIKRKLLALL 917
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
>gi|229588801|ref|YP_002870920.1| PII uridylyl-transferase [Pseudomonas fluorescens SBW25]
gi|259492003|sp|C3K5E4.1|GLND_PSEFS RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|229360667|emb|CAY47525.1| uridylyltransferase [Pseudomonas fluorescens SBW25]
Length = 900
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 31/188 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRDKEVI----------------DY---IQQRLETDA---SFAPSLR-SS 107
+ V+D +G+ I D V DY IQ+R+ +FAP + S+
Sbjct: 749 YIVLDTEGESIGDNPVRVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
P T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPV---TVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITD-AD 864
Query: 168 GYAIKDPK 175
+ DP+
Sbjct: 865 NQPLSDPE 872
Score = 43.5 bits (101), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D D + + D E+ +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSDPELCRRLQ 878
>gi|261751472|ref|ZP_05995181.1| uridylyltransferase [Brucella suis bv. 5 str. 513]
gi|261741225|gb|EEY29151.1| uridylyltransferase [Brucella suis bv. 5 str. 513]
Length = 935
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ +++ G+L ++ +++D++L I A+I++ G +D F V
Sbjct: 835 PRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 894
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 895 DLVGHKISNATRQGNIKRKL 914
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 99 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 158
+F R + + + T IE G DRPGL SE+ +++DL ++ +A I T ++
Sbjct: 830 AFKVEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVID 889
Query: 159 VVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+VTD G+ I + R IK L +L
Sbjct: 890 SFYVTD-LVGHKISNATRQGNIKRKLLALL 918
>gi|254482871|ref|ZP_05096108.1| protein-P-II uridylyltransferase [marine gamma proteobacterium
HTCC2148]
gi|214036952|gb|EEB77622.1| protein-P-II uridylyltransferase [marine gamma proteobacterium
HTCC2148]
Length = 880
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 86/188 (45%), Gaps = 23/188 (12%)
Query: 16 RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVI 74
R +D+N A+ T I + + + + ++ L ++L I A I +++ G +D F V+
Sbjct: 683 RSSLDSN-VANTTQIFIHARSHAQLFSRICAQLEQLDLSIHDARIYNANDGMTLDTFFVL 741
Query: 75 DCDGKKI-RDKEVIDYIQQRL-----ETD--------------ASFAPSLRSSVGVMPTE 114
DGK I D I++I++ L +TD SF+ +++ V +
Sbjct: 742 GSDGKSIAEDSTRINHIREHLSLTLSDTDNARDIVQRRTPRAKKSFSVPTETAMAVDEVK 801
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
++ +E DRPGL + + + + + A+I T +R V +TD + I DP
Sbjct: 802 NYSVLEIATPDRPGLLARIGRIFVEYDIELQAAKIQTLGERVEDVFFITD-AKQQPITDP 860
Query: 175 KRLSTIKE 182
+ I++
Sbjct: 861 ELCEAIQQ 868
>gi|366159388|ref|ZP_09459250.1| PII uridylyl-transferase [Escherichia sp. TW09308]
Length = 890
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSTDRHEVIRFGLEQILTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|325278101|ref|ZP_08143616.1| PII uridylyl-transferase [Pseudomonas sp. TJI-51]
gi|324096767|gb|EGB95098.1| PII uridylyl-transferase [Pseudomonas sp. TJI-51]
Length = 900
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 87/200 (43%), Gaps = 25/200 (12%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVIDYIQQRLETDASFAPSLR-------------SSVGVMP 112
+ V+D DG I D +++ D + + L ++ ++ V ++
Sbjct: 749 YIVLDNDGGSIGDNPQRVRQIRDGLSEALRNPENYPTIIQRRVPRQLKHFDFPPQVTILN 808
Query: 113 TEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+ T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITD-ADNQP 867
Query: 171 IKDPKRLSTIKELLFNVLRG 190
+ DP+ S ++E + L+
Sbjct: 868 LSDPQLCSRLQEAIVQQLQA 887
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 46/79 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+ T++++ + ++ G+L ++ ++ + +L ++ A I++ G DVF +
Sbjct: 801 PPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFI 860
Query: 74 IDCDGKKIRDKEVIDYIQQ 92
D D + + D ++ +Q+
Sbjct: 861 TDADNQPLSDPQLCSRLQE 879
>gi|148982220|ref|ZP_01816649.1| PII uridylyl-transferase [Vibrionales bacterium SWAT-3]
gi|145960611|gb|EDK25963.1| PII uridylyl-transferase [Vibrionales bacterium SWAT-3]
Length = 873
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 80/181 (44%), Gaps = 20/181 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L+R +P P V+I T + V ++ + V+ L+ N + A + +S
Sbjct: 670 LLRLEDPSQPLVLISKKATRGGTEVFVYCKDQAALFATVVAELDRRNFNVHDAQVMASKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRL------ETDASFAP------SLRSSVG 109
G +D F V+D GK I R K V ++ L + P +++ V
Sbjct: 730 GHVLDTFIVLDQHGKAIDEARHKAVAKHLTHVLADGRPTKIKTRRTPRNLQHFKVKTLVE 789
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ + T +E D PGL ++V A A+L N+ A+I T +RA + +T +
Sbjct: 790 FLPTKSKKRTLMELRALDTPGLLAQVGATFAELGINLHGAKITTIGERAEDLFILTSDTG 849
Query: 168 G 168
G
Sbjct: 850 G 850
>gi|386265651|ref|YP_005829143.1| PII uridylyl-transferase [Haemophilus influenzae R2846]
gi|309972887|gb|ADO96088.1| PII uridylyl-transferase [Haemophilus influenzae R2846]
Length = 863
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 72/145 (49%), Gaps = 22/145 (15%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDA----SFAPSLRSSVGVMP 112
I++ G+ D F + + +G+ + R +E+ + L+++ S P+ + ++
Sbjct: 720 ITTQDGYVFDSFIITELNGELVEFDRRRELEQALTLALQSEKLPALSITPNRQLQHFIVQ 779
Query: 113 TE---------EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT 163
T+ EHT +E D+PGL ++V + +L+ N++NA+I T ++A +T
Sbjct: 780 TDVRFLHENKKEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILT 839
Query: 164 DHSTGYAIKDPKRLSTIKELLFNVL 188
+ G A+ +R E+L NVL
Sbjct: 840 NQ-FGQALDSQQR-----EILRNVL 858
>gi|399006249|ref|ZP_10708777.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM17]
gi|398122708|gb|EJM12294.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM17]
Length = 900
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 92/219 (42%), Gaps = 34/219 (15%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETD-ASFAPSLRSSVGV 110
+ V+D DG K+IRD + DY IQ+R+ FA + ++
Sbjct: 749 YIVLDNDGGSIGNNPQRVKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-AHNQQ 867
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNR 209
+ DP+ S +++ + L S PP + R
Sbjct: 868 LSDPQLCSRLQDAIVEQL---------SVSQEPPTALTR 897
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRR---------MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R PP+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFPPQVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D +++ D ++ +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDAHNQQLSDPQLCSRLQ 878
>gi|417844793|ref|ZP_12490832.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M21639]
gi|341956273|gb|EGT82703.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M21639]
Length = 863
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 75/152 (49%), Gaps = 36/152 (23%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPT-- 113
I++ G+ D F + + +G E++++ ++R E + + +L+S ++ +MP
Sbjct: 720 ITTQDGYVFDSFIITELNG------ELVEFDRRR-ELEQALTLALQSEKLPALSIMPNRQ 772
Query: 114 -----------------EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+EHT +E D+PGL ++V + ++L+ N++NA+I T ++A
Sbjct: 773 LQHFIVQTDVRFLHENKKEHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKA 832
Query: 157 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+T+ G A+ +R E+L NVL
Sbjct: 833 EDFFILTNQ-FGQALDSQQR-----EILRNVL 858
>gi|218698586|ref|YP_002406215.1| PII uridylyl-transferase [Escherichia coli IAI39]
gi|226723941|sp|B7NIC8.1|GLND_ECO7I RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|218368572|emb|CAR16309.1| uridylyltransferase [Escherichia coli IAI39]
Length = 890
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIQFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|186896425|ref|YP_001873537.1| PII uridylyl-transferase [Yersinia pseudotuberculosis PB1/+]
gi|186699451|gb|ACC90080.1| UTP-GlnB uridylyltransferase, GlnD [Yersinia pseudotuberculosis
PB1/+]
Length = 912
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 19/160 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ T I + S ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 716 PLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 775
Query: 74 IDCDGKKI---RDKEVIDYIQQRL-ETDASFAPSLR------------SSVGVMPT--EE 115
++ DG + R + +QQ + +D P +R + +PT E
Sbjct: 776 LEPDGSPLAQDRHPIISHALQQAINRSDYQHPPRVRRLSPKLRHFSVPTEANFLPTHNER 835
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
T +E D+PGL + V + ADL ++ +A I T +R
Sbjct: 836 RTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGER 875
>gi|443469603|ref|ZP_21059757.1| Protein-PII uridylyltransferase [Pseudomonas pseudoalcaligenes
KF707]
gi|442899055|gb|ELS25586.1| Protein-PII uridylyltransferase [Pseudomonas pseudoalcaligenes
KF707]
Length = 900
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 80/187 (42%), Gaps = 25/187 (13%)
Query: 13 NPPRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFM 68
N P V+I + AT I + + ++H + ++ +NL I A I+S + +
Sbjct: 687 NDPLVLIKETAQREFEGATQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTL 746
Query: 69 DVFNVIDCDGKKIRD----------------KEVIDY---IQQRLETDAS-FAPSLRSSV 108
D + V+D DG +I D K DY IQ+R+ FA + ++
Sbjct: 747 DTYIVLDADGGRIGDNPARIREIREGLIDALKNPDDYPAIIQRRVPRQLKHFAFPPQVTI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E DRPGL + + + + ++ NA+I T +R V VTD +
Sbjct: 807 SNDAQRPVTVLELIAPDRPGLLARIGRIFLEFDLSLQNAKIATLGERVEDVFFVTD-ANN 865
Query: 169 YAIKDPK 175
+ DP+
Sbjct: 866 QPLSDPE 872
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 56/108 (51%), Gaps = 9/108 (8%)
Query: 3 DEYAKLIRR---------MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R PP+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 781 DDYPAIIQRRVPRQLKHFAFPPQVTISNDAQRPVTVLELIAPDRPGLLARIGRIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFA 101
++ A I++ G DVF V D + + + D E+ +Q + + S A
Sbjct: 841 SLQNAKIATLGERVEDVFFVTDANNQPLSDPELCRRLQDAIVSQLSQA 888
>gi|317046980|ref|YP_004114628.1| UTP-GlnB uridylyltransferase, GlnD [Pantoea sp. At-9b]
gi|316948597|gb|ADU68072.1| UTP-GlnB uridylyltransferase, GlnD [Pantoea sp. At-9b]
Length = 884
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 20/163 (12%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I +S G MD
Sbjct: 686 LSKPLVLVSPQATRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 745
Query: 71 FNVIDCDGKKI---RDKEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT- 113
F V++ DG + R +I ++Q + T + P S+ + V +PT
Sbjct: 746 FIVLEPDGSPLAADRHPMIIQALEQAI-TQTQWVPPRARRQSSRLKHFSVETEVNFLPTH 804
Query: 114 -EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 805 TDRRSYLELIALDQPGLLARVGEVFADLGVSLHGARISTIGER 847
>gi|22127015|ref|NP_670438.1| PII uridylyl-transferase [Yersinia pestis KIM10+]
gi|45442577|ref|NP_994116.1| PII uridylyl-transferase [Yersinia pestis biovar Microtus str.
91001]
gi|149366957|ref|ZP_01888990.1| [protein-PII] uridylyltransferase [Yersinia pestis CA88-4125]
gi|167468856|ref|ZP_02333560.1| PII uridylyl-transferase [Yersinia pestis FV-1]
gi|170023313|ref|YP_001719818.1| PII uridylyl-transferase [Yersinia pseudotuberculosis YPIII]
gi|218928210|ref|YP_002346085.1| PII uridylyl-transferase [Yersinia pestis CO92]
gi|21960062|gb|AAM86689.1|AE013914_9 protein PII [Yersinia pestis KIM10+]
gi|45437442|gb|AAS62993.1| [protein-PII] uridylyltransferase [Yersinia pestis biovar Microtus
str. 91001]
gi|115346821|emb|CAL19707.1| [protein-PII] uridylyltransferase [Yersinia pestis CO92]
gi|149290571|gb|EDM40647.1| [protein-PII] uridylyltransferase [Yersinia pestis CA88-4125]
gi|169749847|gb|ACA67365.1| UTP-GlnB uridylyltransferase, GlnD [Yersinia pseudotuberculosis
YPIII]
Length = 912
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 19/160 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ T I + S ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 716 PLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 775
Query: 74 IDCDGKKI---RDKEVIDYIQQRL-ETDASFAPSLR------------SSVGVMPT--EE 115
++ DG + R + +QQ + +D P +R + +PT E
Sbjct: 776 LEPDGSPLAQDRHPIISHALQQAINRSDYQHPPRVRRLSPKLRHFSVPTEANFLPTHNER 835
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
T +E D+PGL + V + ADL ++ +A I T +R
Sbjct: 836 RTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGER 875
>gi|383649266|ref|ZP_09959672.1| PII uridylyl-transferase [Streptomyces chartreusis NRRL 12338]
Length = 815
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV + ATVI+V S + G+L ++ + L D +++++ A++S+ G +D F V
Sbjct: 730 PPRVSVHPAASRLATVIEVRSQDAPGLLFRIGRALEDASVLVRSAHVSTLGANAVDAFYV 789
Query: 74 IDCDGKKIRDKEVIDYIQQRLE 95
+G + E + + ++LE
Sbjct: 790 TGPEGAPLPGDEA-ESVARKLE 810
>gi|417858727|ref|ZP_12503784.1| PII uridylyl-transferase [Agrobacterium tumefaciens F2]
gi|338824731|gb|EGP58698.1| PII uridylyl-transferase [Agrobacterium tumefaciens F2]
Length = 942
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V+I N TVI+V+ +++ G+L + V+ D++L I A I++ G +D F V
Sbjct: 826 PPSVIISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYV 885
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G+K+ + I RL+
Sbjct: 886 TDLFGQKVTNDNRQASIATRLKA 908
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 92 QRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 151
+R ++ + PS+ S G+ + + T IE DRPGL +++ AV+ADL ++ +A I T
Sbjct: 817 RRKKSAFTIPPSVIISNGL--SNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITT 874
Query: 152 HNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDD 193
++ +VTD G + + R ++I L V+ +D
Sbjct: 875 FGEKVIDTFYVTD-LFGQKVTNDNRQASIATRLKAVMSEQED 915
>gi|325291780|ref|YP_004277644.1| protein PII uridylyltransferase [Agrobacterium sp. H13-3]
gi|418407873|ref|ZP_12981190.1| PII uridylyl-transferase [Agrobacterium tumefaciens 5A]
gi|325059633|gb|ADY63324.1| protein PII uridylyltransferase [Agrobacterium sp. H13-3]
gi|358005859|gb|EHJ98184.1| PII uridylyl-transferase [Agrobacterium tumefaciens 5A]
Length = 942
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP V+I N TVI+V+ +++ G+L + V+ D++L I A I++ G +D F V
Sbjct: 826 PPSVIISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYV 885
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G+K+ + I RL+
Sbjct: 886 TDLFGQKVTNDNRQASIATRLKA 908
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 92 QRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 151
+R ++ + PS+ S G+ + + T IE DRPGL +++ AV+ADL ++ +A I T
Sbjct: 817 RRKKSAFTIPPSVIISNGL--SNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITT 874
Query: 152 HNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDD 193
++ +VTD G + + R ++I L V+ +D
Sbjct: 875 FGEKVIDTFYVTD-LFGQKVTNDNRQASIATRLKAVMSEQED 915
>gi|424512908|emb|CCO66492.1| predicted protein [Bathycoccus prasinos]
Length = 250
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 89/216 (41%), Gaps = 49/216 (22%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V+IDN + AT+++++ +K G L + + ++ L I +A I+ + F V
Sbjct: 35 PKVIIDNLSDPLATILEIEFGDKLGELADTCEAIRNLGLDISRAEITESN---QNRFYVT 91
Query: 75 D--CDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVG-------------------VMPT 113
D K + D Q L T + P + V V PT
Sbjct: 92 DHQSSEKITASARLEDLRQTVLTTMCYYHPEAQEFVQQTARNSKPYEVADDAETEYVTPT 151
Query: 114 EEH-----TSIEFTG-------------TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
++ T I T TDRPGL SE+ VL DL+ NVV AEI T
Sbjct: 152 KKKRQIVPTRITVTSVSNGTKSKLLIETTDRPGLLSEIVRVLKDLNLNVVQAEIDTIGAA 211
Query: 156 AAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGY 191
A + T H G A+ D +++L+ N L+ Y
Sbjct: 212 AVDTMLCTYH--GKALND-----NMEQLVVNTLQYY 240
>gi|224109832|ref|XP_002315327.1| predicted protein [Populus trichocarpa]
gi|222864367|gb|EEF01498.1| predicted protein [Populus trichocarpa]
Length = 411
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 84/188 (44%), Gaps = 14/188 (7%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDV 70
NP V +DN T+I++ + G+ +++ L D ++ I + + + G +D+
Sbjct: 230 NPVSVTVDNTFSPSHTLIQILCKDHKGLSYDIMRTLKDYHIQISYGRFFANRKGNCEVDL 289
Query: 71 FNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRP 127
F ++ DGKKI D + + RL + P + V P E +E +G RP
Sbjct: 290 F-LMQADGKKIVDPNKQNALCSRLRMEL-LRPVRLAVVSRGPDTELLVANPVELSGRGRP 347
Query: 128 GLFSEVCAVLADLHCNVVNAEIWTH--NDRAAAVVHV-TDHSTGYAIKDPKRLSTIKELL 184
+F ++ L L+ + + EI H +DR V + D G + K I+E +
Sbjct: 348 LVFHDITLALKTLNTRIFSVEIGRHMIHDREWEVYRILLDEGDGLPVSRNK----IEEGV 403
Query: 185 FNVLRGYD 192
VL G++
Sbjct: 404 RKVLMGWE 411
>gi|108806513|ref|YP_650429.1| PII uridylyl-transferase [Yersinia pestis Antiqua]
gi|108813119|ref|YP_648886.1| PII uridylyl-transferase [Yersinia pestis Nepal516]
gi|145598953|ref|YP_001163029.1| PII uridylyl-transferase [Yersinia pestis Pestoides F]
gi|153946912|ref|YP_001399995.1| PII uridylyl-transferase [Yersinia pseudotuberculosis IP 31758]
gi|162421348|ref|YP_001607773.1| PII uridylyl-transferase [Yersinia pestis Angola]
gi|165927056|ref|ZP_02222888.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165939842|ref|ZP_02228382.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Orientalis
str. IP275]
gi|166011922|ref|ZP_02232820.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166211324|ref|ZP_02237359.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Antiqua
str. B42003004]
gi|167399773|ref|ZP_02305291.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167419478|ref|ZP_02311231.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167425260|ref|ZP_02317013.1| protein-P-II uridylyltransferase [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|229837749|ref|ZP_04457909.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
Pestoides A]
gi|229840971|ref|ZP_04461130.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229843072|ref|ZP_04463222.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
biovar Orientalis str. India 195]
gi|229903561|ref|ZP_04518674.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
Nepal516]
gi|270487342|ref|ZP_06204416.1| protein-P-II uridylyltransferase [Yersinia pestis KIM D27]
gi|294503059|ref|YP_003567121.1| (protein-PII) uridylyltransferase [Yersinia pestis Z176003]
gi|384121499|ref|YP_005504119.1| (protein-PII) uridylyltransferase [Yersinia pestis D106004]
gi|384125673|ref|YP_005508287.1| (protein-PII) uridylyltransferase [Yersinia pestis D182038]
gi|384141091|ref|YP_005523793.1| PII uridylyl-transferase [Yersinia pestis A1122]
gi|384413672|ref|YP_005623034.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
biovar Medievalis str. Harbin 35]
gi|420545665|ref|ZP_15043744.1| protein-P-II uridylyltransferase [Yersinia pestis PY-01]
gi|420550968|ref|ZP_15048489.1| protein-P-II uridylyltransferase [Yersinia pestis PY-02]
gi|420556475|ref|ZP_15053365.1| protein-P-II uridylyltransferase [Yersinia pestis PY-03]
gi|420562065|ref|ZP_15058261.1| protein-P-II uridylyltransferase [Yersinia pestis PY-04]
gi|420567089|ref|ZP_15062800.1| protein-P-II uridylyltransferase [Yersinia pestis PY-05]
gi|420572758|ref|ZP_15067950.1| protein-P-II uridylyltransferase [Yersinia pestis PY-06]
gi|420578086|ref|ZP_15072772.1| protein-P-II uridylyltransferase [Yersinia pestis PY-07]
gi|420583421|ref|ZP_15077624.1| protein-P-II uridylyltransferase [Yersinia pestis PY-08]
gi|420588573|ref|ZP_15082266.1| protein-P-II uridylyltransferase [Yersinia pestis PY-09]
gi|420593889|ref|ZP_15087058.1| protein-P-II uridylyltransferase [Yersinia pestis PY-10]
gi|420599592|ref|ZP_15092159.1| protein-P-II uridylyltransferase [Yersinia pestis PY-11]
gi|420605051|ref|ZP_15097038.1| protein-P-II uridylyltransferase [Yersinia pestis PY-12]
gi|420610412|ref|ZP_15101885.1| protein-P-II uridylyltransferase [Yersinia pestis PY-13]
gi|420615712|ref|ZP_15106577.1| protein-P-II uridylyltransferase [Yersinia pestis PY-14]
gi|420621124|ref|ZP_15111351.1| protein-P-II uridylyltransferase [Yersinia pestis PY-15]
gi|420626166|ref|ZP_15115918.1| protein-P-II uridylyltransferase [Yersinia pestis PY-16]
gi|420636457|ref|ZP_15125179.1| protein-P-II uridylyltransferase [Yersinia pestis PY-25]
gi|420642053|ref|ZP_15130233.1| protein-P-II uridylyltransferase [Yersinia pestis PY-29]
gi|420647183|ref|ZP_15134929.1| protein-P-II uridylyltransferase [Yersinia pestis PY-32]
gi|420652835|ref|ZP_15140002.1| protein-P-II uridylyltransferase [Yersinia pestis PY-34]
gi|420658345|ref|ZP_15144958.1| protein-P-II uridylyltransferase [Yersinia pestis PY-36]
gi|420663678|ref|ZP_15149726.1| protein-P-II uridylyltransferase [Yersinia pestis PY-42]
gi|420668650|ref|ZP_15154232.1| protein-P-II uridylyltransferase [Yersinia pestis PY-45]
gi|420673944|ref|ZP_15159049.1| protein-P-II uridylyltransferase [Yersinia pestis PY-46]
gi|420679489|ref|ZP_15164079.1| protein-P-II uridylyltransferase [Yersinia pestis PY-47]
gi|420684734|ref|ZP_15168782.1| protein-P-II uridylyltransferase [Yersinia pestis PY-48]
gi|420689909|ref|ZP_15173366.1| protein-P-II uridylyltransferase [Yersinia pestis PY-52]
gi|420695728|ref|ZP_15178458.1| protein-P-II uridylyltransferase [Yersinia pestis PY-53]
gi|420701095|ref|ZP_15183052.1| protein-P-II uridylyltransferase [Yersinia pestis PY-54]
gi|420707106|ref|ZP_15187933.1| protein-P-II uridylyltransferase [Yersinia pestis PY-55]
gi|420712418|ref|ZP_15192723.1| protein-P-II uridylyltransferase [Yersinia pestis PY-56]
gi|420717821|ref|ZP_15197459.1| protein-P-II uridylyltransferase [Yersinia pestis PY-58]
gi|420723425|ref|ZP_15202276.1| protein-P-II uridylyltransferase [Yersinia pestis PY-59]
gi|420729057|ref|ZP_15207305.1| protein-P-II uridylyltransferase [Yersinia pestis PY-60]
gi|420734102|ref|ZP_15211856.1| protein-P-II uridylyltransferase [Yersinia pestis PY-61]
gi|420739572|ref|ZP_15216786.1| protein-P-II uridylyltransferase [Yersinia pestis PY-63]
gi|420744908|ref|ZP_15221485.1| protein-P-II uridylyltransferase [Yersinia pestis PY-64]
gi|420750699|ref|ZP_15226436.1| protein-P-II uridylyltransferase [Yersinia pestis PY-65]
gi|420755963|ref|ZP_15231009.1| protein-P-II uridylyltransferase [Yersinia pestis PY-66]
gi|420761839|ref|ZP_15235802.1| protein-P-II uridylyltransferase [Yersinia pestis PY-71]
gi|420767061|ref|ZP_15240513.1| protein-P-II uridylyltransferase [Yersinia pestis PY-72]
gi|420772050|ref|ZP_15244994.1| protein-P-II uridylyltransferase [Yersinia pestis PY-76]
gi|420777488|ref|ZP_15249858.1| protein-P-II uridylyltransferase [Yersinia pestis PY-88]
gi|420782988|ref|ZP_15254671.1| protein-P-II uridylyltransferase [Yersinia pestis PY-89]
gi|420788341|ref|ZP_15259387.1| protein-P-II uridylyltransferase [Yersinia pestis PY-90]
gi|420793815|ref|ZP_15264328.1| protein-P-II uridylyltransferase [Yersinia pestis PY-91]
gi|420798934|ref|ZP_15268933.1| protein-P-II uridylyltransferase [Yersinia pestis PY-92]
gi|420804282|ref|ZP_15273744.1| protein-P-II uridylyltransferase [Yersinia pestis PY-93]
gi|420809549|ref|ZP_15278518.1| protein-P-II uridylyltransferase [Yersinia pestis PY-94]
gi|420815238|ref|ZP_15283613.1| protein-P-II uridylyltransferase [Yersinia pestis PY-95]
gi|420820411|ref|ZP_15288296.1| protein-P-II uridylyltransferase [Yersinia pestis PY-96]
gi|420825508|ref|ZP_15292851.1| protein-P-II uridylyltransferase [Yersinia pestis PY-98]
gi|420831275|ref|ZP_15298064.1| protein-P-II uridylyltransferase [Yersinia pestis PY-99]
gi|420836129|ref|ZP_15302443.1| protein-P-II uridylyltransferase [Yersinia pestis PY-100]
gi|420841271|ref|ZP_15307101.1| protein-P-II uridylyltransferase [Yersinia pestis PY-101]
gi|420846889|ref|ZP_15312173.1| protein-P-II uridylyltransferase [Yersinia pestis PY-102]
gi|420857822|ref|ZP_15321636.1| protein-P-II uridylyltransferase [Yersinia pestis PY-113]
gi|421762492|ref|ZP_16199289.1| PII uridylyl-transferase [Yersinia pestis INS]
gi|21362571|sp|Q8ZH68.2|GLND_YERPE RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|122980003|sp|Q1CFE4.1|GLND_YERPN RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|123072950|sp|Q1CAN8.1|GLND_YERPA RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|166232257|sp|A4TL94.1|GLND_YERPP RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|166990448|sp|A7FFG7.1|GLND_YERP3 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|238687289|sp|A9R397.1|GLND_YERPG RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|108776767|gb|ABG19286.1| (protein-PII) uridylyltransferase [Yersinia pestis Nepal516]
gi|108778426|gb|ABG12484.1| (protein-PII) uridylyltransferase [Yersinia pestis Antiqua]
gi|145210649|gb|ABP40056.1| (protein-PII) uridylyltransferase [Yersinia pestis Pestoides F]
gi|152958407|gb|ABS45868.1| protein-P-II uridylyltransferase [Yersinia pseudotuberculosis IP
31758]
gi|162354163|gb|ABX88111.1| protein-P-II uridylyltransferase [Yersinia pestis Angola]
gi|165912245|gb|EDR30882.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Orientalis
str. IP275]
gi|165920952|gb|EDR38176.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165989188|gb|EDR41489.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166207095|gb|EDR51575.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Antiqua
str. B42003004]
gi|166962219|gb|EDR58240.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167050481|gb|EDR61889.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167055660|gb|EDR65444.1| protein-P-II uridylyltransferase [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|229679331|gb|EEO75434.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
Nepal516]
gi|229689948|gb|EEO82007.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
biovar Orientalis str. India 195]
gi|229697337|gb|EEO87384.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229704126|gb|EEO91138.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
Pestoides A]
gi|262361095|gb|ACY57816.1| (protein-PII) uridylyltransferase [Yersinia pestis D106004]
gi|262365337|gb|ACY61894.1| (protein-PII) uridylyltransferase [Yersinia pestis D182038]
gi|270335846|gb|EFA46623.1| protein-P-II uridylyltransferase [Yersinia pestis KIM D27]
gi|294353518|gb|ADE63859.1| (protein-PII) uridylyltransferase [Yersinia pestis Z176003]
gi|320014176|gb|ADV97747.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
biovar Medievalis str. Harbin 35]
gi|342856220|gb|AEL74773.1| PII uridylyl-transferase [Yersinia pestis A1122]
gi|391429975|gb|EIQ91756.1| protein-P-II uridylyltransferase [Yersinia pestis PY-01]
gi|391431125|gb|EIQ92735.1| protein-P-II uridylyltransferase [Yersinia pestis PY-02]
gi|391433526|gb|EIQ94853.1| protein-P-II uridylyltransferase [Yersinia pestis PY-03]
gi|391446182|gb|EIR06245.1| protein-P-II uridylyltransferase [Yersinia pestis PY-04]
gi|391446790|gb|EIR06785.1| protein-P-II uridylyltransferase [Yersinia pestis PY-05]
gi|391450718|gb|EIR10319.1| protein-P-II uridylyltransferase [Yersinia pestis PY-06]
gi|391462288|gb|EIR20815.1| protein-P-II uridylyltransferase [Yersinia pestis PY-07]
gi|391463605|gb|EIR21997.1| protein-P-II uridylyltransferase [Yersinia pestis PY-08]
gi|391465595|gb|EIR23774.1| protein-P-II uridylyltransferase [Yersinia pestis PY-09]
gi|391479011|gb|EIR35853.1| protein-P-II uridylyltransferase [Yersinia pestis PY-10]
gi|391480139|gb|EIR36844.1| protein-P-II uridylyltransferase [Yersinia pestis PY-11]
gi|391480383|gb|EIR37060.1| protein-P-II uridylyltransferase [Yersinia pestis PY-12]
gi|391494241|gb|EIR49495.1| protein-P-II uridylyltransferase [Yersinia pestis PY-13]
gi|391495407|gb|EIR50510.1| protein-P-II uridylyltransferase [Yersinia pestis PY-15]
gi|391498131|gb|EIR52924.1| protein-P-II uridylyltransferase [Yersinia pestis PY-14]
gi|391510216|gb|EIR63773.1| protein-P-II uridylyltransferase [Yersinia pestis PY-16]
gi|391515089|gb|EIR68138.1| protein-P-II uridylyltransferase [Yersinia pestis PY-25]
gi|391525731|gb|EIR77846.1| protein-P-II uridylyltransferase [Yersinia pestis PY-29]
gi|391528582|gb|EIR80384.1| protein-P-II uridylyltransferase [Yersinia pestis PY-34]
gi|391529444|gb|EIR81128.1| protein-P-II uridylyltransferase [Yersinia pestis PY-32]
gi|391542257|gb|EIR92732.1| protein-P-II uridylyltransferase [Yersinia pestis PY-36]
gi|391544003|gb|EIR94268.1| protein-P-II uridylyltransferase [Yersinia pestis PY-42]
gi|391544974|gb|EIR95120.1| protein-P-II uridylyltransferase [Yersinia pestis PY-45]
gi|391559083|gb|EIS07898.1| protein-P-II uridylyltransferase [Yersinia pestis PY-46]
gi|391559648|gb|EIS08382.1| protein-P-II uridylyltransferase [Yersinia pestis PY-47]
gi|391561235|gb|EIS09787.1| protein-P-II uridylyltransferase [Yersinia pestis PY-48]
gi|391574272|gb|EIS21199.1| protein-P-II uridylyltransferase [Yersinia pestis PY-52]
gi|391574858|gb|EIS21685.1| protein-P-II uridylyltransferase [Yersinia pestis PY-53]
gi|391586651|gb|EIS31929.1| protein-P-II uridylyltransferase [Yersinia pestis PY-55]
gi|391587211|gb|EIS32406.1| protein-P-II uridylyltransferase [Yersinia pestis PY-54]
gi|391590188|gb|EIS34972.1| protein-P-II uridylyltransferase [Yersinia pestis PY-56]
gi|391603614|gb|EIS46779.1| protein-P-II uridylyltransferase [Yersinia pestis PY-60]
gi|391603932|gb|EIS47047.1| protein-P-II uridylyltransferase [Yersinia pestis PY-58]
gi|391605164|gb|EIS48082.1| protein-P-II uridylyltransferase [Yersinia pestis PY-59]
gi|391617994|gb|EIS59482.1| protein-P-II uridylyltransferase [Yersinia pestis PY-61]
gi|391618549|gb|EIS59951.1| protein-P-II uridylyltransferase [Yersinia pestis PY-63]
gi|391625563|gb|EIS66037.1| protein-P-II uridylyltransferase [Yersinia pestis PY-64]
gi|391629625|gb|EIS69527.1| protein-P-II uridylyltransferase [Yersinia pestis PY-65]
gi|391641029|gb|EIS79505.1| protein-P-II uridylyltransferase [Yersinia pestis PY-71]
gi|391643627|gb|EIS81779.1| protein-P-II uridylyltransferase [Yersinia pestis PY-72]
gi|391643718|gb|EIS81855.1| protein-P-II uridylyltransferase [Yersinia pestis PY-66]
gi|391653265|gb|EIS90247.1| protein-P-II uridylyltransferase [Yersinia pestis PY-76]
gi|391659125|gb|EIS95461.1| protein-P-II uridylyltransferase [Yersinia pestis PY-88]
gi|391664031|gb|EIS99803.1| protein-P-II uridylyltransferase [Yersinia pestis PY-89]
gi|391666070|gb|EIT01582.1| protein-P-II uridylyltransferase [Yersinia pestis PY-90]
gi|391672015|gb|EIT06896.1| protein-P-II uridylyltransferase [Yersinia pestis PY-91]
gi|391684241|gb|EIT17939.1| protein-P-II uridylyltransferase [Yersinia pestis PY-93]
gi|391685591|gb|EIT19109.1| protein-P-II uridylyltransferase [Yersinia pestis PY-92]
gi|391686547|gb|EIT19957.1| protein-P-II uridylyltransferase [Yersinia pestis PY-94]
gi|391698275|gb|EIT30597.1| protein-P-II uridylyltransferase [Yersinia pestis PY-95]
gi|391701914|gb|EIT33863.1| protein-P-II uridylyltransferase [Yersinia pestis PY-96]
gi|391702855|gb|EIT34691.1| protein-P-II uridylyltransferase [Yersinia pestis PY-98]
gi|391712365|gb|EIT43251.1| protein-P-II uridylyltransferase [Yersinia pestis PY-99]
gi|391718715|gb|EIT48932.1| protein-P-II uridylyltransferase [Yersinia pestis PY-100]
gi|391719043|gb|EIT49220.1| protein-P-II uridylyltransferase [Yersinia pestis PY-101]
gi|391729901|gb|EIT58834.1| protein-P-II uridylyltransferase [Yersinia pestis PY-102]
gi|391736472|gb|EIT64490.1| protein-P-II uridylyltransferase [Yersinia pestis PY-113]
gi|411176698|gb|EKS46713.1| PII uridylyl-transferase [Yersinia pestis INS]
Length = 893
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 19/160 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ T I + S ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 697 PLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 756
Query: 74 IDCDGKKI---RDKEVIDYIQQRL-ETDASFAPSLR------------SSVGVMPT--EE 115
++ DG + R + +QQ + +D P +R + +PT E
Sbjct: 757 LEPDGSPLAQDRHPIISHALQQAINRSDYQHPPRVRRLSPKLRHFSVPTEANFLPTHNER 816
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
T +E D+PGL + V + ADL ++ +A I T +R
Sbjct: 817 RTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGER 856
>gi|308270950|emb|CBX27560.1| hypothetical protein N47_H23820 [uncultured Desulfobacterium sp.]
Length = 407
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
D L RM+ ++ IDNN+ + T+I+V S + G+L ++ L L IK A I++
Sbjct: 310 DHKPPLTSRMH--KINIDNNSSSFFTIIEVFSYDFPGLLYKITNALFSCRLDIKLAKIAT 367
Query: 63 DGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
+DVF V+D DG+K+ KE + I+
Sbjct: 368 KVDQVVDVFYVMDFDGQKVDSKERVSLIE 396
>gi|54310086|ref|YP_131106.1| PII uridylyl-transferase [Photobacterium profundum SS9]
gi|81170624|sp|Q6LN22.1|GLND_PHOPR RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|46914525|emb|CAG21304.1| putative protein-P-II uridylyltransferase [Photobacterium profundum
SS9]
Length = 874
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 17/168 (10%)
Query: 6 AKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
A L + P +++ T + V + +K + V+ L+ NL + A I +S
Sbjct: 673 ALLTHDHDKPLILLSKKATRGGTEVFVYNKDKAKLFAIVVSELDKKNLSVHDAQIMNSKD 732
Query: 65 GWFMDVFNVIDCDGKKI--------RDKEVIDYIQQRLETDASFAP------SLRSSVGV 110
G+ +D F V+D GK I R V + + E AP ++++ V
Sbjct: 733 GYTLDTFMVLDPSGKTIPENRHNTIRRALVNALTKMKSERKNKRAPRKLMHFNVKTQVDF 792
Query: 111 MPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+PT+ + T++E D PGL + + AV A ++ A+I T +RA
Sbjct: 793 LPTKTGKKTTMELIALDTPGLLARIGAVFAKQKVSLQAAKITTIGERA 840
>gi|420852309|ref|ZP_15316947.1| protein-P-II uridylyltransferase, partial [Yersinia pestis PY-103]
gi|391732820|gb|EIT61338.1| protein-P-II uridylyltransferase, partial [Yersinia pestis PY-103]
Length = 891
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 19/160 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ T I + S ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 697 PLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 756
Query: 74 IDCDGKKI---RDKEVIDYIQQRL-ETDASFAPSLR------------SSVGVMPT--EE 115
++ DG + R + +QQ + +D P +R + +PT E
Sbjct: 757 LEPDGSPLAQDRHPIISHALQQAINRSDYQHPPRVRRLSPKLRHFSVPTEANFLPTHNER 816
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
T +E D+PGL + V + ADL ++ +A I T +R
Sbjct: 817 RTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGER 856
>gi|312959390|ref|ZP_07773907.1| uridylyltransferase [Pseudomonas fluorescens WH6]
gi|311286107|gb|EFQ64671.1| uridylyltransferase [Pseudomonas fluorescens WH6]
Length = 900
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 31/201 (15%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLR-SS 107
+ V+D +G KKIR+ + DY IQ+R+ +FAP + S+
Sbjct: 749 YIVLDTEGESIGDNPARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVTISN 808
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
P T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPV---TVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITD-AD 864
Query: 168 GYAIKDPKRLSTIKELLFNVL 188
+ DP+ ++E + L
Sbjct: 865 NQPLSDPELCLRLQEAIVQQL 885
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF + D D + + D E+ +Q+
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSDPELCLRLQE 879
>gi|315497085|ref|YP_004085889.1| utp-glnb uridylyltransferase, glnd [Asticcacaulis excentricus CB
48]
gi|315415097|gb|ADU11738.1| UTP-GlnB uridylyltransferase, GlnD [Asticcacaulis excentricus CB
48]
Length = 959
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 84/211 (39%), Gaps = 38/211 (18%)
Query: 22 NTCADATVIKVDSVNKHGILLQVIQVLNDVNL-VIKKAYISSDGGWFMDVFNVIDCDGKK 80
+T +A + ++ G+ + + ++ V+ +S +DVF V D GK
Sbjct: 752 DTTRNAACFCITGPDRPGLFADLARCFTNLGANVVGAQVFTSTTAQALDVFYVQDTQGKP 811
Query: 81 IR--DKEVIDYIQQRLET---DASFAPSLRSSV--------GVMPT--------EEHTSI 119
D I +++ LE + AP + ++ + PT + T I
Sbjct: 812 FGHDDPGRIRQMEKALEKAVGGEAAAPLIHKAINAHRTAAFAIAPTVVFDDESNPQMTII 871
Query: 120 EFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLST 179
E +G DRPGL ++V +VLA + +A I + +RA +V DH T + +R
Sbjct: 872 EVSGRDRPGLLADVASVLARARLDTASAHIDCYGERAVDAFYVVDHFTRKQLTKAQR--- 928
Query: 180 IKELLFNVLRGYDDFRKAKTS-LSPPGIMNR 209
D +A T L PP NR
Sbjct: 929 ------------DKVHRALTEVLDPPSAPNR 947
>gi|51597320|ref|YP_071511.1| PII uridylyl-transferase [Yersinia pseudotuberculosis IP 32953]
gi|81638764|sp|Q667I7.1|GLND_YERPS RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|51590602|emb|CAH22243.1| [protein-PII] uridylyltransferase [Yersinia pseudotuberculosis IP
32953]
Length = 893
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 19/160 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ T I + S ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 697 PLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 756
Query: 74 IDCDGKKI---RDKEVIDYIQQRL-ETDASFAPSLR------------SSVGVMPT--EE 115
++ DG + R + +QQ + +D P +R + +PT E
Sbjct: 757 LEPDGSPLAQDRHPIISHALQQAINRSDYQHPPRVRRLSPKLRHFSVPTEANFLPTHNER 816
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
T +E D+PGL + V + ADL ++ +A I T +R
Sbjct: 817 RTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGER 856
>gi|283781890|ref|YP_003372645.1| UTP-GlnB uridylyltransferase, GlnD [Pirellula staleyi DSM 6068]
gi|283440343|gb|ADB18785.1| UTP-GlnB uridylyltransferase, GlnD [Pirellula staleyi DSM 6068]
Length = 885
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P RV DNNT T++ V + ++ G+L + + L ++ L + A I + +DVF V
Sbjct: 795 PTRVSFDNNTAERFTIVAVFAYDRMGLLYTITRALFELELSVSIAKIGTHLDQVVDVFYV 854
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
G KI D++ ++ I+ +L
Sbjct: 855 TTLGGAKIVDEKRLEEIRAKL 875
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 84/210 (40%), Gaps = 32/210 (15%)
Query: 9 IRRMNPPRVVIDNNTCADATVIKV-----DSVNKHGILLQVIQVLNDVNLVIKKAYISSD 63
+R+++P V + A+ V++ D + GI ++ L+ I A I++
Sbjct: 672 LRKLSPSDAVAWSKYQAERNVVEYAVGTYDQITP-GIFHKLTGALSSQRQQILSAEINTL 730
Query: 64 G-GWFMDVFNVIDCDGKKI----RDKEVIDYIQQRLETDASFAPSLR-----------SS 107
G +D F V D D R +EV ++Q L T + P+ R S
Sbjct: 731 ADGLVLDRFYVQDRDYSGAPPENRRQEVCRALEQALTTASQGEPTFRRTWQDRSQATDSR 790
Query: 108 VGVMPT---------EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 158
+PT E T + DR GL + L +L +V A+I TH D+
Sbjct: 791 AQHLPTRVSFDNNTAERFTIVAVFAYDRMGLLYTITRALFELELSVSIAKIGTHLDQVVD 850
Query: 159 VVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
V +VT G I D KRL I+ L +
Sbjct: 851 VFYVTTLG-GAKIVDEKRLEEIRAKLLAAI 879
>gi|425897799|ref|ZP_18874390.1| protein-P-II uridylyltransferase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397892389|gb|EJL08867.1| protein-P-II uridylyltransferase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 900
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 92/219 (42%), Gaps = 34/219 (15%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETD-ASFAPSLRSSVGV 110
+ V+D DG K+IRD + DY IQ+R+ FA + ++
Sbjct: 749 YIVLDNDGGSIGNNPQRVKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 809 DAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-AHNQQ 867
Query: 171 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNR 209
+ DP+ S +++ + L S PP + R
Sbjct: 868 LSDPQLCSRLQDAIVEQL---------SVSHEPPTALTR 897
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRR---------MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R PP+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFPPQVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D +++ D ++ +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDAHNQQLSDPQLCSRLQ 878
>gi|451947389|ref|YP_007467984.1| (protein-PII) uridylyltransferase [Desulfocapsa sulfexigens DSM
10523]
gi|451906737|gb|AGF78331.1| (protein-PII) uridylyltransferase [Desulfocapsa sulfexigens DSM
10523]
Length = 855
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
N RVV+DN + TV++V S + G L ++ Q L D + I +A+I+++ +DVF
Sbjct: 764 NEIRVVVDNKASDNYTVVEVYSDDSPGQLYRITQTLADFGINIYRAFIATEVEQLIDVFY 823
Query: 73 VIDCDGKKIRDKEVI 87
V+D +KI + I
Sbjct: 824 VLDSQQEKIVEPAFI 838
>gi|420631353|ref|ZP_15120613.1| protein-P-II uridylyltransferase [Yersinia pestis PY-19]
gi|391510963|gb|EIR64418.1| protein-P-II uridylyltransferase [Yersinia pestis PY-19]
Length = 893
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 19/169 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ T I + S ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 697 PLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 756
Query: 74 IDCDGKKI-RDKE-VIDYIQQRLETDASFAP--------------SLRSSVGVMPT--EE 115
++ DG + +D+ +I + Q+ + + P S+ + +PT E
Sbjct: 757 LEPDGSPLAQDRHPIISHALQQAINRSDYQPPPRVRRLSPKLRHFSVPTEANFLPTHNER 816
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T +E D+PGL + V + ADL ++ +A I T +R + + D
Sbjct: 817 RTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGERVEDLFVLAD 865
>gi|429330794|ref|ZP_19211576.1| PII uridylyl-transferase [Pseudomonas putida CSV86]
gi|428764574|gb|EKX86707.1| PII uridylyl-transferase [Pseudomonas putida CSV86]
Length = 900
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 89/211 (42%), Gaps = 32/211 (15%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 748
Query: 71 FNVIDCDGKKI-----RDKEVIDYIQQRLETDASFAPSL--------------RSSVGVM 111
+ V+D DG I R K++ D + L + PS+ V ++
Sbjct: 749 YIVLDNDGGSIGNNPQRVKQIRDGLSDALRNPDDY-PSIIHRRVPRQLKHFAFPPQVTIL 807
Query: 112 PTEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 169
+ T +E DRPGL + + + D ++ NA+I T +R V +TD +
Sbjct: 808 NDAQRPVTILELIAPDRPGLLARIGKIFLDFDLSLQNAKIATLGERVEDVFFITD-ADNQ 866
Query: 170 AIKDPKRLSTIKELLFNVLR-----GYDDFR 195
+ DP+ S +++ + LR G + FR
Sbjct: 867 PLSDPQLCSRLQDAIVEQLRVDQASGTESFR 897
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+ T++++ + ++ G+L ++ ++ D +L ++ A I++ G DVF +
Sbjct: 801 PPQVTILNDAQRPVTILELIAPDRPGLLARIGKIFLDFDLSLQNAKIATLGERVEDVFFI 860
Query: 74 IDCDGKKIRDKEVI----DYIQQRLETD-ASFAPSLRSSV 108
D D + + D ++ D I ++L D AS S R ++
Sbjct: 861 TDADNQPLSDPQLCSRLQDAIVEQLRVDQASGTESFRLTI 900
>gi|432375091|ref|ZP_19618114.1| [protein-PII] uridylyltransferase [Escherichia coli KTE11]
gi|430892349|gb|ELC14841.1| [protein-PII] uridylyltransferase [Escherichia coli KTE11]
Length = 890
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSTDRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|307245459|ref|ZP_07527547.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307254413|ref|ZP_07536251.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307258872|ref|ZP_07540604.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306853800|gb|EFM86017.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306862712|gb|EFM94668.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306867223|gb|EFM99079.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 850
Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 48/193 (24%), Positives = 78/193 (40%), Gaps = 22/193 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDVFNV 73
P V++ N AT I + ++ + L++ Q+L+ + I A I+S G +D F V
Sbjct: 659 PLVLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDSFIV 718
Query: 74 IDCDGKKIRDKEVIDYIQQRLET------------------DASFAPSLRSSVGVMPTEE 115
+ +GK + + + I+Q LE SF + +
Sbjct: 719 TELNGKPLEEMRC-EQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLADSQQN 777
Query: 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
T+ E DR GL + V +V L N+VNA+I T +R VT + D K
Sbjct: 778 RTAFELFTLDREGLLARVSSVFNQLGLNLVNAKITTIGERVEDFFVVTTQQ--HQALDDK 835
Query: 176 RLSTIKELLFNVL 188
+K L + L
Sbjct: 836 AQKALKSALLDEL 848
>gi|326523227|dbj|BAJ88654.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 445
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 5/145 (3%)
Query: 9 IRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFM 68
++++ + DN+ T++++ V++ G+L +++ L D N+ + SD F
Sbjct: 254 MKKVQKATINFDNSLSPAHTLLQILCVDQKGLLYDMLRTLKDCNIKVTYGRFWSDKKGFR 313
Query: 69 DV-FNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGT 124
+V + DGKK+ D E D ++ R+ ++ P V P E +E +G
Sbjct: 314 EVDLFIKQADGKKVIDPEKQDALRSRMRSEM-LHPLRVMIVNRGPDTELLVANPVELSGK 372
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEI 149
RP +F + L L + +AEI
Sbjct: 373 GRPRVFYDATLALKALGICIFSAEI 397
>gi|260866316|ref|YP_003232718.1| uridylyltransferase [Escherichia coli O111:H- str. 11128]
gi|415823979|ref|ZP_11512354.1| protein-P-II uridylyltransferase [Escherichia coli OK1180]
gi|417190934|ref|ZP_12013530.1| protein-P-II uridylyltransferase [Escherichia coli 4.0522]
gi|417216630|ref|ZP_12023302.1| protein-P-II uridylyltransferase [Escherichia coli JB1-95]
gi|417589786|ref|ZP_12240507.1| protein-P-II uridylyltransferase [Escherichia coli 2534-86]
gi|419195124|ref|ZP_13738539.1| protein-P-II uridylyltransferase [Escherichia coli DEC8A]
gi|419201288|ref|ZP_13744520.1| protein-P-II uridylyltransferase [Escherichia coli DEC8B]
gi|419219379|ref|ZP_13762340.1| protein-P-II uridylyltransferase [Escherichia coli DEC8E]
gi|419891816|ref|ZP_14411857.1| PII uridylyl-transferase [Escherichia coli O111:H8 str. CVM9570]
gi|419893446|ref|ZP_14413430.1| PII uridylyl-transferase [Escherichia coli O111:H8 str. CVM9574]
gi|420087276|ref|ZP_14599247.1| PII uridylyl-transferase [Escherichia coli O111:H8 str. CVM9602]
gi|420092445|ref|ZP_14604147.1| PII uridylyl-transferase [Escherichia coli O111:H8 str. CVM9634]
gi|424774770|ref|ZP_18201780.1| PII uridylyl-transferase [Escherichia coli O111:H8 str.
CFSAN001632]
gi|257762672|dbj|BAI34167.1| uridylyltransferase [Escherichia coli O111:H- str. 11128]
gi|323176480|gb|EFZ62072.1| protein-P-II uridylyltransferase [Escherichia coli OK1180]
gi|345346144|gb|EGW78480.1| protein-P-II uridylyltransferase [Escherichia coli 2534-86]
gi|378054638|gb|EHW16916.1| protein-P-II uridylyltransferase [Escherichia coli DEC8A]
gi|378058195|gb|EHW20415.1| protein-P-II uridylyltransferase [Escherichia coli DEC8B]
gi|378073885|gb|EHW35930.1| protein-P-II uridylyltransferase [Escherichia coli DEC8E]
gi|386191906|gb|EIH80647.1| protein-P-II uridylyltransferase [Escherichia coli 4.0522]
gi|386193492|gb|EIH87776.1| protein-P-II uridylyltransferase [Escherichia coli JB1-95]
gi|388348835|gb|EIL14403.1| PII uridylyl-transferase [Escherichia coli O111:H8 str. CVM9570]
gi|388367380|gb|EIL31064.1| PII uridylyl-transferase [Escherichia coli O111:H8 str. CVM9574]
gi|394393526|gb|EJE70211.1| PII uridylyl-transferase [Escherichia coli O111:H8 str. CVM9602]
gi|394400463|gb|EJE76377.1| PII uridylyl-transferase [Escherichia coli O111:H8 str. CVM9634]
gi|421933626|gb|EKT91413.1| PII uridylyl-transferase [Escherichia coli O111:H8 str.
CFSAN001632]
Length = 890
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|432677762|ref|ZP_19913192.1| [protein-PII] uridylyltransferase [Escherichia coli KTE142]
gi|431207944|gb|ELF06174.1| [protein-PII] uridylyltransferase [Escherichia coli KTE142]
Length = 890
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|432452920|ref|ZP_19695167.1| [protein-PII] uridylyltransferase [Escherichia coli KTE193]
gi|433031572|ref|ZP_20219397.1| [protein-PII] uridylyltransferase [Escherichia coli KTE112]
gi|430975514|gb|ELC92409.1| [protein-PII] uridylyltransferase [Escherichia coli KTE193]
gi|431561507|gb|ELI34876.1| [protein-PII] uridylyltransferase [Escherichia coli KTE112]
Length = 890
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|326526393|dbj|BAJ97213.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 446
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 5/145 (3%)
Query: 9 IRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFM 68
++++ + DN+ T++++ V++ G+L +++ L D N+ + SD F
Sbjct: 255 MKKVQKATINFDNSLSPAHTLLQILCVDQKGLLYDMLRTLKDCNIKVTYGRFWSDKKGFR 314
Query: 69 DV-FNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGT 124
+V + DGKK+ D E D ++ R+ ++ P V P E +E +G
Sbjct: 315 EVDLFIKQADGKKVIDPEKQDALRSRMRSEM-LHPLRVMIVNRGPDTELLVANPVELSGK 373
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEI 149
RP +F + L L + +AEI
Sbjct: 374 GRPRVFYDATLALKALGICIFSAEI 398
>gi|157157798|ref|YP_001461336.1| PII uridylyl-transferase [Escherichia coli E24377A]
gi|166990442|sp|A7ZHQ7.1|GLND_ECO24 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|157079828|gb|ABV19536.1| protein-P-II uridylyltransferase [Escherichia coli E24377A]
Length = 890
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|450185103|ref|ZP_21888950.1| PII uridylyl-transferase [Escherichia coli SEPT362]
gi|449325373|gb|EMD15280.1| PII uridylyl-transferase [Escherichia coli SEPT362]
Length = 890
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|432777050|ref|ZP_20011306.1| [protein-PII] uridylyltransferase [Escherichia coli KTE59]
gi|432825646|ref|ZP_20059303.1| [protein-PII] uridylyltransferase [Escherichia coli KTE123]
gi|431331684|gb|ELG18930.1| [protein-PII] uridylyltransferase [Escherichia coli KTE59]
gi|431375030|gb|ELG60374.1| [protein-PII] uridylyltransferase [Escherichia coli KTE123]
Length = 890
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|417229422|ref|ZP_12031008.1| protein-P-II uridylyltransferase [Escherichia coli 5.0959]
gi|386205912|gb|EII10418.1| protein-P-II uridylyltransferase [Escherichia coli 5.0959]
Length = 890
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|417126665|ref|ZP_11974219.1| protein-P-II uridylyltransferase [Escherichia coli 97.0246]
gi|386144915|gb|EIG91379.1| protein-P-II uridylyltransferase [Escherichia coli 97.0246]
Length = 890
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|417584985|ref|ZP_12235768.1| protein-P-II uridylyltransferase [Escherichia coli STEC_C165-02]
gi|345342348|gb|EGW74744.1| protein-P-II uridylyltransferase [Escherichia coli STEC_C165-02]
Length = 890
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|222154992|ref|YP_002555131.1| [Protein-PII] uridylyltransferase [Escherichia coli LF82]
gi|306815233|ref|ZP_07449382.1| PII uridylyl-transferase [Escherichia coli NC101]
gi|387615514|ref|YP_006118536.1| PII uridylyl-transferase [Escherichia coli O83:H1 str. NRG 857C]
gi|419699096|ref|ZP_14226719.1| PII uridylyl-transferase [Escherichia coli SCI-07]
gi|422380522|ref|ZP_16460700.1| protein-P-II uridylyltransferase [Escherichia coli MS 57-2]
gi|432384723|ref|ZP_19627636.1| [protein-PII] uridylyltransferase [Escherichia coli KTE15]
gi|432385552|ref|ZP_19628454.1| [protein-PII] uridylyltransferase [Escherichia coli KTE16]
gi|432430327|ref|ZP_19672777.1| [protein-PII] uridylyltransferase [Escherichia coli KTE187]
gi|432512364|ref|ZP_19749611.1| [protein-PII] uridylyltransferase [Escherichia coli KTE224]
gi|432609872|ref|ZP_19846048.1| [protein-PII] uridylyltransferase [Escherichia coli KTE72]
gi|432644575|ref|ZP_19880382.1| [protein-PII] uridylyltransferase [Escherichia coli KTE86]
gi|432654209|ref|ZP_19889931.1| [protein-PII] uridylyltransferase [Escherichia coli KTE93]
gi|432697473|ref|ZP_19932649.1| [protein-PII] uridylyltransferase [Escherichia coli KTE169]
gi|432744092|ref|ZP_19978801.1| [protein-PII] uridylyltransferase [Escherichia coli KTE43]
gi|432842428|ref|ZP_20075856.1| [protein-PII] uridylyltransferase [Escherichia coli KTE141]
gi|432902467|ref|ZP_20112215.1| [protein-PII] uridylyltransferase [Escherichia coli KTE194]
gi|432941861|ref|ZP_20139359.1| [protein-PII] uridylyltransferase [Escherichia coli KTE183]
gi|432970303|ref|ZP_20159185.1| [protein-PII] uridylyltransferase [Escherichia coli KTE207]
gi|432983889|ref|ZP_20172631.1| [protein-PII] uridylyltransferase [Escherichia coli KTE215]
gi|433037092|ref|ZP_20224720.1| [protein-PII] uridylyltransferase [Escherichia coli KTE113]
gi|433081071|ref|ZP_20267551.1| [protein-PII] uridylyltransferase [Escherichia coli KTE133]
gi|433099705|ref|ZP_20285826.1| [protein-PII] uridylyltransferase [Escherichia coli KTE145]
gi|433142665|ref|ZP_20327851.1| [protein-PII] uridylyltransferase [Escherichia coli KTE168]
gi|433191488|ref|ZP_20375555.1| [protein-PII] uridylyltransferase [Escherichia coli KTE88]
gi|433196736|ref|ZP_20380674.1| [protein-PII] uridylyltransferase [Escherichia coli KTE94]
gi|433206337|ref|ZP_20390046.1| [protein-PII] uridylyltransferase [Escherichia coli KTE97]
gi|222031997|emb|CAP74736.1| [Protein-PII] uridylyltransferase [Escherichia coli LF82]
gi|305850895|gb|EFM51350.1| PII uridylyl-transferase [Escherichia coli NC101]
gi|312944775|gb|ADR25602.1| PII uridylyl-transferase [Escherichia coli O83:H1 str. NRG 857C]
gi|324008262|gb|EGB77481.1| protein-P-II uridylyltransferase [Escherichia coli MS 57-2]
gi|380349738|gb|EIA38003.1| PII uridylyl-transferase [Escherichia coli SCI-07]
gi|430901946|gb|ELC23842.1| [protein-PII] uridylyltransferase [Escherichia coli KTE15]
gi|430911080|gb|ELC32378.1| [protein-PII] uridylyltransferase [Escherichia coli KTE16]
gi|430957633|gb|ELC76285.1| [protein-PII] uridylyltransferase [Escherichia coli KTE187]
gi|431045494|gb|ELD55727.1| [protein-PII] uridylyltransferase [Escherichia coli KTE224]
gi|431152503|gb|ELE53454.1| [protein-PII] uridylyltransferase [Escherichia coli KTE72]
gi|431185579|gb|ELE85308.1| [protein-PII] uridylyltransferase [Escherichia coli KTE86]
gi|431196257|gb|ELE95202.1| [protein-PII] uridylyltransferase [Escherichia coli KTE93]
gi|431247662|gb|ELF41883.1| [protein-PII] uridylyltransferase [Escherichia coli KTE169]
gi|431296465|gb|ELF86177.1| [protein-PII] uridylyltransferase [Escherichia coli KTE43]
gi|431398196|gb|ELG81619.1| [protein-PII] uridylyltransferase [Escherichia coli KTE141]
gi|431438596|gb|ELH19970.1| [protein-PII] uridylyltransferase [Escherichia coli KTE194]
gi|431456462|gb|ELH36806.1| [protein-PII] uridylyltransferase [Escherichia coli KTE183]
gi|431487745|gb|ELH67389.1| [protein-PII] uridylyltransferase [Escherichia coli KTE207]
gi|431507955|gb|ELH86237.1| [protein-PII] uridylyltransferase [Escherichia coli KTE215]
gi|431557200|gb|ELI30974.1| [protein-PII] uridylyltransferase [Escherichia coli KTE113]
gi|431607323|gb|ELI76693.1| [protein-PII] uridylyltransferase [Escherichia coli KTE133]
gi|431624028|gb|ELI92652.1| [protein-PII] uridylyltransferase [Escherichia coli KTE145]
gi|431668045|gb|ELJ34621.1| [protein-PII] uridylyltransferase [Escherichia coli KTE168]
gi|431699557|gb|ELJ64562.1| [protein-PII] uridylyltransferase [Escherichia coli KTE88]
gi|431726634|gb|ELJ90442.1| [protein-PII] uridylyltransferase [Escherichia coli KTE94]
gi|431733936|gb|ELJ97339.1| [protein-PII] uridylyltransferase [Escherichia coli KTE97]
Length = 890
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|417844045|ref|ZP_12490108.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M21127]
gi|341947997|gb|EGT74636.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M21127]
Length = 863
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 73/145 (50%), Gaps = 22/145 (15%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDA----SFAPSLRSSVGVMP 112
I++ G+ D F + + +G+ + R +E+ + L+++ S AP+ + +
Sbjct: 720 ITTQDGYVFDSFIITELNGELVEFDRRRELEQALTVALQSEKLPALSIAPNRQLQHFTVQ 779
Query: 113 TE---------EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT 163
T+ EHT +E D+PGL ++V + ++L+ N++NA+I T ++A +T
Sbjct: 780 TDVRFLHENKKEHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILT 839
Query: 164 DHSTGYAIKDPKRLSTIKELLFNVL 188
+ G A+ +R E+L NVL
Sbjct: 840 NQ-FGQALDSQQR-----EILRNVL 858
>gi|332160590|ref|YP_004297167.1| PII uridylyl-transferase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325664820|gb|ADZ41464.1| PII uridylyl-transferase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330859596|emb|CBX69936.1| [Protein-PII] uridylyltransferase [Yersinia enterocolitica W22703]
Length = 892
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 18/168 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ T I + ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 697 PLVLVSRQATRGGTEIFIWCPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 756
Query: 74 IDCDGKKI---RDKEVIDYIQQRLETD-------ASFAPSLR-----SSVGVMPT--EEH 116
++ DG + R +I +QQ + +P LR + +PT E
Sbjct: 757 LEPDGSPLAQDRHPIIIHALQQAMTRQNYQHPRVRRLSPKLRHFSVPTETNFLPTHNERR 816
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T +E D+PGL + V + ADL ++ +A I T +R + + D
Sbjct: 817 TYLELIALDQPGLLARVGDIFADLGLSLHSARITTIGERVEDLFVLAD 864
>gi|193067726|ref|ZP_03048693.1| protein-P-II uridylyltransferase [Escherichia coli E110019]
gi|260853377|ref|YP_003227268.1| PII uridylyl-transferase [Escherichia coli O26:H11 str. 11368]
gi|300824110|ref|ZP_07104230.1| protein-P-II uridylyltransferase [Escherichia coli MS 119-7]
gi|307311386|ref|ZP_07591028.1| UTP-GlnB uridylyltransferase, GlnD [Escherichia coli W]
gi|331666408|ref|ZP_08367289.1| protein-P-II uridylyltransferase [Escherichia coli TA271]
gi|331680746|ref|ZP_08381405.1| protein-P-II uridylyltransferase [Escherichia coli H591]
gi|378714495|ref|YP_005279388.1| UTP-GlnB uridylyltransferase, GlnD [Escherichia coli KO11FL]
gi|386607468|ref|YP_006122954.1| uridylyltransferase [Escherichia coli W]
gi|386698665|ref|YP_006162502.1| PII uridylyl-transferase [Escherichia coli KO11FL]
gi|386707895|ref|YP_006171616.1| PII uridylyl-transferase [Escherichia coli W]
gi|415780886|ref|ZP_11490673.1| protein-P-II uridylyltransferase [Escherichia coli EPECa14]
gi|417225071|ref|ZP_12028362.1| protein-P-II uridylyltransferase [Escherichia coli 96.154]
gi|417268668|ref|ZP_12056028.1| protein-P-II uridylyltransferase [Escherichia coli 3.3884]
gi|417295368|ref|ZP_12082621.1| protein-P-II uridylyltransferase [Escherichia coli 900105 (10e)]
gi|417600429|ref|ZP_12251016.1| protein-P-II uridylyltransferase [Escherichia coli STEC_94C]
gi|419207117|ref|ZP_13750248.1| protein-P-II uridylyltransferase [Escherichia coli DEC8C]
gi|419213540|ref|ZP_13756575.1| protein-P-II uridylyltransferase [Escherichia coli DEC8D]
gi|419224812|ref|ZP_13767707.1| protein-P-II uridylyltransferase [Escherichia coli DEC9A]
gi|419230692|ref|ZP_13773488.1| protein-P-II uridylyltransferase [Escherichia coli DEC9B]
gi|419235978|ref|ZP_13778731.1| protein-P-II uridylyltransferase [Escherichia coli DEC9C]
gi|419241565|ref|ZP_13784217.1| protein-P-II uridylyltransferase [Escherichia coli DEC9D]
gi|419246969|ref|ZP_13789588.1| protein-P-II uridylyltransferase [Escherichia coli DEC9E]
gi|419252804|ref|ZP_13795356.1| protein-P-II uridylyltransferase [Escherichia coli DEC10A]
gi|419258747|ref|ZP_13801211.1| protein-P-II uridylyltransferase [Escherichia coli DEC10B]
gi|419264574|ref|ZP_13806964.1| protein-P-II uridylyltransferase [Escherichia coli DEC10C]
gi|419270350|ref|ZP_13812685.1| protein-P-II uridylyltransferase [Escherichia coli DEC10D]
gi|419281797|ref|ZP_13824022.1| protein-P-II uridylyltransferase [Escherichia coli DEC10F]
gi|419875702|ref|ZP_14397527.1| PII uridylyl-transferase [Escherichia coli O111:H11 str. CVM9534]
gi|419880111|ref|ZP_14401520.1| PII uridylyl-transferase [Escherichia coli O111:H11 str. CVM9545]
gi|419904656|ref|ZP_14423647.1| PII uridylyl-transferase [Escherichia coli O26:H11 str. CVM9942]
gi|419906045|ref|ZP_14424979.1| UTP-GlnB uridylyltransferase, GlnD [Escherichia coli O26:H11 str.
CVM10026]
gi|419929371|ref|ZP_14447046.1| PII uridylyl-transferase [Escherichia coli 541-1]
gi|420100304|ref|ZP_14611484.1| PII uridylyl-transferase [Escherichia coli O111:H11 str. CVM9455]
gi|420105948|ref|ZP_14616380.1| PII uridylyl-transferase [Escherichia coli O111:H11 str. CVM9553]
gi|420113080|ref|ZP_14622845.1| PII uridylyl-transferase [Escherichia coli O26:H11 str. CVM10021]
gi|420119492|ref|ZP_14628768.1| PII uridylyl-transferase [Escherichia coli O26:H11 str. CVM10030]
gi|420125531|ref|ZP_14634333.1| PII uridylyl-transferase [Escherichia coli O26:H11 str. CVM10224]
gi|420132862|ref|ZP_14641165.1| PII uridylyl-transferase [Escherichia coli O26:H11 str. CVM9952]
gi|422776804|ref|ZP_16830458.1| protein-P-II uridylyltransferase [Escherichia coli H120]
gi|423709887|ref|ZP_17684241.1| [protein-PII] uridylyltransferase [Escherichia coli B799]
gi|424746707|ref|ZP_18174929.1| PII uridylyl-transferase [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424756654|ref|ZP_18184460.1| PII uridylyl-transferase [Escherichia coli O111:H11 str.
CFSAN001630]
gi|425376906|ref|ZP_18761338.1| protein-P-II uridylyltransferase [Escherichia coli EC1865]
gi|432379782|ref|ZP_19622757.1| [protein-PII] uridylyltransferase [Escherichia coli KTE12]
gi|432752992|ref|ZP_19987563.1| [protein-PII] uridylyltransferase [Escherichia coli KTE29]
gi|432833267|ref|ZP_20066816.1| [protein-PII] uridylyltransferase [Escherichia coli KTE136]
gi|192959138|gb|EDV89574.1| protein-P-II uridylyltransferase [Escherichia coli E110019]
gi|257752026|dbj|BAI23528.1| uridylyltransferase [Escherichia coli O26:H11 str. 11368]
gi|300523387|gb|EFK44456.1| protein-P-II uridylyltransferase [Escherichia coli MS 119-7]
gi|306908365|gb|EFN38863.1| UTP-GlnB uridylyltransferase, GlnD [Escherichia coli W]
gi|315059385|gb|ADT73712.1| uridylyltransferase [Escherichia coli W]
gi|323157997|gb|EFZ44099.1| protein-P-II uridylyltransferase [Escherichia coli EPECa14]
gi|323380056|gb|ADX52324.1| UTP-GlnB uridylyltransferase, GlnD [Escherichia coli KO11FL]
gi|323945641|gb|EGB41690.1| protein-P-II uridylyltransferase [Escherichia coli H120]
gi|331066619|gb|EGI38496.1| protein-P-II uridylyltransferase [Escherichia coli TA271]
gi|331072209|gb|EGI43545.1| protein-P-II uridylyltransferase [Escherichia coli H591]
gi|345354587|gb|EGW86808.1| protein-P-II uridylyltransferase [Escherichia coli STEC_94C]
gi|378064659|gb|EHW26819.1| protein-P-II uridylyltransferase [Escherichia coli DEC8C]
gi|378070155|gb|EHW32238.1| protein-P-II uridylyltransferase [Escherichia coli DEC8D]
gi|378083212|gb|EHW45147.1| protein-P-II uridylyltransferase [Escherichia coli DEC9A]
gi|378083559|gb|EHW45491.1| protein-P-II uridylyltransferase [Escherichia coli DEC9B]
gi|378091386|gb|EHW53217.1| protein-P-II uridylyltransferase [Escherichia coli DEC9C]
gi|378095870|gb|EHW57652.1| protein-P-II uridylyltransferase [Escherichia coli DEC9D]
gi|378103985|gb|EHW65647.1| protein-P-II uridylyltransferase [Escherichia coli DEC9E]
gi|378108908|gb|EHW70520.1| protein-P-II uridylyltransferase [Escherichia coli DEC10A]
gi|378118769|gb|EHW80271.1| protein-P-II uridylyltransferase [Escherichia coli DEC10B]
gi|378120188|gb|EHW81669.1| protein-P-II uridylyltransferase [Escherichia coli DEC10C]
gi|378122094|gb|EHW83538.1| protein-P-II uridylyltransferase [Escherichia coli DEC10D]
gi|378141397|gb|EHX02614.1| protein-P-II uridylyltransferase [Escherichia coli DEC10F]
gi|383390192|gb|AFH15150.1| PII uridylyl-transferase [Escherichia coli KO11FL]
gi|383403587|gb|AFH09830.1| PII uridylyl-transferase [Escherichia coli W]
gi|385705105|gb|EIG42172.1| [protein-PII] uridylyltransferase [Escherichia coli B799]
gi|386200119|gb|EIH99110.1| protein-P-II uridylyltransferase [Escherichia coli 96.154]
gi|386227473|gb|EII54829.1| protein-P-II uridylyltransferase [Escherichia coli 3.3884]
gi|386260987|gb|EIJ16455.1| protein-P-II uridylyltransferase [Escherichia coli 900105 (10e)]
gi|388347920|gb|EIL13567.1| PII uridylyl-transferase [Escherichia coli O111:H11 str. CVM9534]
gi|388367120|gb|EIL30815.1| PII uridylyl-transferase [Escherichia coli O26:H11 str. CVM9942]
gi|388369919|gb|EIL33485.1| PII uridylyl-transferase [Escherichia coli O111:H11 str. CVM9545]
gi|388379975|gb|EIL42601.1| UTP-GlnB uridylyltransferase, GlnD [Escherichia coli O26:H11 str.
CVM10026]
gi|388403398|gb|EIL63925.1| PII uridylyl-transferase [Escherichia coli 541-1]
gi|394394956|gb|EJE71472.1| PII uridylyl-transferase [Escherichia coli O26:H11 str. CVM10224]
gi|394412966|gb|EJE87052.1| PII uridylyl-transferase [Escherichia coli O26:H11 str. CVM10021]
gi|394417696|gb|EJE91413.1| PII uridylyl-transferase [Escherichia coli O111:H11 str. CVM9553]
gi|394421011|gb|EJE94506.1| PII uridylyl-transferase [Escherichia coli O111:H11 str. CVM9455]
gi|394427722|gb|EJF00375.1| PII uridylyl-transferase [Escherichia coli O26:H11 str. CVM9952]
gi|394431367|gb|EJF03575.1| PII uridylyl-transferase [Escherichia coli O26:H11 str. CVM10030]
gi|408311107|gb|EKJ28119.1| protein-P-II uridylyltransferase [Escherichia coli EC1865]
gi|421947724|gb|EKU04787.1| PII uridylyl-transferase [Escherichia coli O26:H11 str.
CFSAN001629]
gi|421949576|gb|EKU06510.1| PII uridylyl-transferase [Escherichia coli O111:H11 str.
CFSAN001630]
gi|430894391|gb|ELC16680.1| [protein-PII] uridylyltransferase [Escherichia coli KTE12]
gi|431291650|gb|ELF82153.1| [protein-PII] uridylyltransferase [Escherichia coli KTE29]
gi|431389366|gb|ELG73079.1| [protein-PII] uridylyltransferase [Escherichia coli KTE136]
Length = 890
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|432944731|ref|ZP_20141141.1| [protein-PII] uridylyltransferase [Escherichia coli KTE196]
gi|433041661|ref|ZP_20229200.1| [protein-PII] uridylyltransferase [Escherichia coli KTE117]
gi|431464662|gb|ELH44781.1| [protein-PII] uridylyltransferase [Escherichia coli KTE196]
gi|431561306|gb|ELI34690.1| [protein-PII] uridylyltransferase [Escherichia coli KTE117]
Length = 890
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|432763449|ref|ZP_19997906.1| [protein-PII] uridylyltransferase [Escherichia coli KTE48]
gi|431314524|gb|ELG02476.1| [protein-PII] uridylyltransferase [Escherichia coli KTE48]
Length = 890
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|419921797|ref|ZP_14439833.1| PII uridylyl-transferase [Escherichia coli 541-15]
gi|388397206|gb|EIL58235.1| PII uridylyl-transferase [Escherichia coli 541-15]
Length = 890
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|417839977|ref|ZP_12486136.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M19107]
gi|341951103|gb|EGT77683.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M19107]
Length = 863
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 73/145 (50%), Gaps = 22/145 (15%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDA----SFAPSLRSSVGVMP 112
I++ G+ D F + + +G+ + R +E+ + L+++ S AP+ + +
Sbjct: 720 ITTQDGYVFDSFIITELNGELVEFDRRRELEQALTLALQSEKLPALSIAPNRQLQHFTVQ 779
Query: 113 TE---------EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT 163
T+ EHT +E D+PGL ++V + ++L+ N++NA+I T ++A +T
Sbjct: 780 TDVRFLHENKKEHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILT 839
Query: 164 DHSTGYAIKDPKRLSTIKELLFNVL 188
+ G A+ +R E+L NVL
Sbjct: 840 NQ-FGQALDSQQR-----EILRNVL 858
>gi|422783064|ref|ZP_16835848.1| protein-P-II uridylyltransferase [Escherichia coli TW10509]
gi|323975666|gb|EGB70762.1| protein-P-II uridylyltransferase [Escherichia coli TW10509]
Length = 890
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|322419213|ref|YP_004198436.1| metal dependent phosphohydrolase [Geobacter sp. M18]
gi|320125600|gb|ADW13160.1| metal dependent phosphohydrolase [Geobacter sp. M18]
Length = 894
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P RV IDN +D TVI + + +K G+L + L + L I + IS+ DVF V
Sbjct: 808 PARVEIDNEVSSDYTVIDIYAHDKVGLLYSITSTLTRLGLYIGVSKISTKVDQVADVFYV 867
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G+KI + ++ I++ L
Sbjct: 868 KDIFGQKISEPAKLEEIRKEL 888
>gi|170683624|ref|YP_001742294.1| PII uridylyl-transferase [Escherichia coli SMS-3-5]
gi|226723944|sp|B1LGW8.1|GLND_ECOSM RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|170521342|gb|ACB19520.1| protein-P-II uridylyltransferase [Escherichia coli SMS-3-5]
Length = 890
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|329296138|ref|ZP_08253474.1| PII uridylyl-transferase [Plautia stali symbiont]
Length = 880
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 69/162 (42%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I +S G MD
Sbjct: 682 LSKPLVLVSPQATRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 741
Query: 71 FNVIDCDGKKI---RDKEVIDYIQQRLETDASFAPSLR------------SSVGVMPT-- 113
F V++ DG + R +I ++Q + P R + V +PT
Sbjct: 742 FIVLEPDGSPLAPDRHPLIIQALEQAITQTQWVPPRTRRPSSRLKHFSVDTEVNFLPTHT 801
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 802 DRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGER 843
>gi|415814269|ref|ZP_11505889.1| protein-P-II uridylyltransferase [Escherichia coli LT-68]
gi|323170957|gb|EFZ56606.1| protein-P-II uridylyltransferase [Escherichia coli LT-68]
Length = 890
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|301025953|ref|ZP_07189437.1| protein-P-II uridylyltransferase [Escherichia coli MS 69-1]
gi|419918944|ref|ZP_14437116.1| PII uridylyl-transferase [Escherichia coli KD2]
gi|432546483|ref|ZP_19783295.1| [protein-PII] uridylyltransferase [Escherichia coli KTE236]
gi|432546888|ref|ZP_19783688.1| [protein-PII] uridylyltransferase [Escherichia coli KTE237]
gi|432625132|ref|ZP_19861131.1| [protein-PII] uridylyltransferase [Escherichia coli KTE76]
gi|300395752|gb|EFJ79290.1| protein-P-II uridylyltransferase [Escherichia coli MS 69-1]
gi|388389015|gb|EIL50558.1| PII uridylyl-transferase [Escherichia coli KD2]
gi|431068265|gb|ELD76770.1| [protein-PII] uridylyltransferase [Escherichia coli KTE236]
gi|431086700|gb|ELD92722.1| [protein-PII] uridylyltransferase [Escherichia coli KTE237]
gi|431153198|gb|ELE54117.1| [protein-PII] uridylyltransferase [Escherichia coli KTE76]
Length = 890
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|123443487|ref|YP_001007460.1| PII uridylyl-transferase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|420259722|ref|ZP_14762421.1| PII uridylyl-transferase [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|166232256|sp|A1JP85.1|GLND_YERE8 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|122090448|emb|CAL13316.1| [protein-PII] uridylyltransferase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|404512815|gb|EKA26651.1| PII uridylyl-transferase [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 892
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 18/168 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ T I + ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 697 PLVLVSRQATRGGTEIFIWCPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 756
Query: 74 IDCDGKKI---RDKEVIDYIQQRLETD-------ASFAPSLR-----SSVGVMPT--EEH 116
++ DG + R +I +QQ + +P LR + +PT E
Sbjct: 757 LEPDGSPLAQDRHPIIIHALQQAMTRQNYQHPRVRRLSPKLRHFSVPTETNFLPTHNERR 816
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T +E D+PGL + V + ADL ++ +A I T +R + + D
Sbjct: 817 TYLELIALDQPGLLARVGDIFADLGLSLHSARITTIGERVEDLFVLAD 864
>gi|110804219|ref|YP_687739.1| PII uridylyl-transferase [Shigella flexneri 5 str. 8401]
gi|424836686|ref|ZP_18261323.1| PII uridylyl-transferase [Shigella flexneri 5a str. M90T]
gi|123343151|sp|Q0T842.1|GLND_SHIF8 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|110613767|gb|ABF02434.1| protein PII [Shigella flexneri 5 str. 8401]
gi|383465738|gb|EID60759.1| PII uridylyl-transferase [Shigella flexneri 5a str. M90T]
Length = 890
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|110640386|ref|YP_668114.1| PII uridylyl-transferase [Escherichia coli 536]
gi|191172779|ref|ZP_03034316.1| protein-P-II uridylyltransferase [Escherichia coli F11]
gi|300984846|ref|ZP_07177135.1| protein-P-II uridylyltransferase [Escherichia coli MS 200-1]
gi|386617672|ref|YP_006137252.1| Uridylyltransferase [Escherichia coli NA114]
gi|387828235|ref|YP_003348172.1| uridylyltransferase [Escherichia coli SE15]
gi|417287717|ref|ZP_12075003.1| protein-P-II uridylyltransferase [Escherichia coli TW07793]
gi|419912658|ref|ZP_14431106.1| PII uridylyl-transferase [Escherichia coli KD1]
gi|422376522|ref|ZP_16456773.1| protein-P-II uridylyltransferase [Escherichia coli MS 60-1]
gi|432396021|ref|ZP_19638814.1| [protein-PII] uridylyltransferase [Escherichia coli KTE25]
gi|432405054|ref|ZP_19647778.1| [protein-PII] uridylyltransferase [Escherichia coli KTE28]
gi|432420290|ref|ZP_19662849.1| [protein-PII] uridylyltransferase [Escherichia coli KTE178]
gi|432469088|ref|ZP_19711151.1| [protein-PII] uridylyltransferase [Escherichia coli KTE205]
gi|432469499|ref|ZP_19711555.1| [protein-PII] uridylyltransferase [Escherichia coli KTE206]
gi|432498466|ref|ZP_19740247.1| [protein-PII] uridylyltransferase [Escherichia coli KTE216]
gi|432557197|ref|ZP_19793891.1| [protein-PII] uridylyltransferase [Escherichia coli KTE49]
gi|432581359|ref|ZP_19817777.1| [protein-PII] uridylyltransferase [Escherichia coli KTE57]
gi|432692854|ref|ZP_19928074.1| [protein-PII] uridylyltransferase [Escherichia coli KTE162]
gi|432709012|ref|ZP_19944081.1| [protein-PII] uridylyltransferase [Escherichia coli KTE6]
gi|432721767|ref|ZP_19956696.1| [protein-PII] uridylyltransferase [Escherichia coli KTE17]
gi|432726177|ref|ZP_19961066.1| [protein-PII] uridylyltransferase [Escherichia coli KTE18]
gi|432730888|ref|ZP_19965749.1| [protein-PII] uridylyltransferase [Escherichia coli KTE45]
gi|432739945|ref|ZP_19974668.1| [protein-PII] uridylyltransferase [Escherichia coli KTE23]
gi|432762439|ref|ZP_19996903.1| [protein-PII] uridylyltransferase [Escherichia coli KTE46]
gi|432800494|ref|ZP_20034485.1| [protein-PII] uridylyltransferase [Escherichia coli KTE84]
gi|432892742|ref|ZP_20104909.1| [protein-PII] uridylyltransferase [Escherichia coli KTE165]
gi|432917154|ref|ZP_20121825.1| [protein-PII] uridylyltransferase [Escherichia coli KTE173]
gi|432924449|ref|ZP_20126736.1| [protein-PII] uridylyltransferase [Escherichia coli KTE175]
gi|432979554|ref|ZP_20168342.1| [protein-PII] uridylyltransferase [Escherichia coli KTE211]
gi|432989111|ref|ZP_20177784.1| [protein-PII] uridylyltransferase [Escherichia coli KTE217]
gi|433071078|ref|ZP_20257795.1| [protein-PII] uridylyltransferase [Escherichia coli KTE129]
gi|433076325|ref|ZP_20262905.1| [protein-PII] uridylyltransferase [Escherichia coli KTE131]
gi|433095047|ref|ZP_20281273.1| [protein-PII] uridylyltransferase [Escherichia coli KTE139]
gi|433104350|ref|ZP_20290375.1| [protein-PII] uridylyltransferase [Escherichia coli KTE148]
gi|433109346|ref|ZP_20295230.1| [protein-PII] uridylyltransferase [Escherichia coli KTE150]
gi|433118644|ref|ZP_20304367.1| [protein-PII] uridylyltransferase [Escherichia coli KTE157]
gi|433181608|ref|ZP_20365920.1| [protein-PII] uridylyltransferase [Escherichia coli KTE85]
gi|123148412|sp|Q0TLG6.1|GLND_ECOL5 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|110341978|gb|ABG68215.1| [protein-PII] uridylyltransferase [Escherichia coli 536]
gi|190906929|gb|EDV66531.1| protein-P-II uridylyltransferase [Escherichia coli F11]
gi|281177392|dbj|BAI53722.1| uridylyltransferase [Escherichia coli SE15]
gi|300306607|gb|EFJ61127.1| protein-P-II uridylyltransferase [Escherichia coli MS 200-1]
gi|324012180|gb|EGB81399.1| protein-P-II uridylyltransferase [Escherichia coli MS 60-1]
gi|333968173|gb|AEG34978.1| Uridylyltransferase [Escherichia coli NA114]
gi|386248502|gb|EII94674.1| protein-P-II uridylyltransferase [Escherichia coli TW07793]
gi|388391192|gb|EIL52665.1| PII uridylyl-transferase [Escherichia coli KD1]
gi|430919043|gb|ELC39994.1| [protein-PII] uridylyltransferase [Escherichia coli KTE25]
gi|430933279|gb|ELC53690.1| [protein-PII] uridylyltransferase [Escherichia coli KTE28]
gi|430947878|gb|ELC67566.1| [protein-PII] uridylyltransferase [Escherichia coli KTE178]
gi|430988222|gb|ELD04722.1| [protein-PII] uridylyltransferase [Escherichia coli KTE205]
gi|431001477|gb|ELD17060.1| [protein-PII] uridylyltransferase [Escherichia coli KTE206]
gi|431032911|gb|ELD45617.1| [protein-PII] uridylyltransferase [Escherichia coli KTE216]
gi|431094815|gb|ELE00444.1| [protein-PII] uridylyltransferase [Escherichia coli KTE49]
gi|431123119|gb|ELE25862.1| [protein-PII] uridylyltransferase [Escherichia coli KTE57]
gi|431237874|gb|ELF32856.1| [protein-PII] uridylyltransferase [Escherichia coli KTE162]
gi|431252733|gb|ELF46247.1| [protein-PII] uridylyltransferase [Escherichia coli KTE6]
gi|431268980|gb|ELF60341.1| [protein-PII] uridylyltransferase [Escherichia coli KTE17]
gi|431277425|gb|ELF68439.1| [protein-PII] uridylyltransferase [Escherichia coli KTE18]
gi|431278902|gb|ELF69875.1| [protein-PII] uridylyltransferase [Escherichia coli KTE45]
gi|431287317|gb|ELF78135.1| [protein-PII] uridylyltransferase [Escherichia coli KTE23]
gi|431302391|gb|ELF91577.1| [protein-PII] uridylyltransferase [Escherichia coli KTE46]
gi|431351390|gb|ELG38177.1| [protein-PII] uridylyltransferase [Escherichia coli KTE84]
gi|431426163|gb|ELH08208.1| [protein-PII] uridylyltransferase [Escherichia coli KTE165]
gi|431448439|gb|ELH29156.1| [protein-PII] uridylyltransferase [Escherichia coli KTE173]
gi|431450090|gb|ELH30582.1| [protein-PII] uridylyltransferase [Escherichia coli KTE175]
gi|431498504|gb|ELH77690.1| [protein-PII] uridylyltransferase [Escherichia coli KTE211]
gi|431500011|gb|ELH79028.1| [protein-PII] uridylyltransferase [Escherichia coli KTE217]
gi|431595627|gb|ELI65620.1| [protein-PII] uridylyltransferase [Escherichia coli KTE129]
gi|431603319|gb|ELI72745.1| [protein-PII] uridylyltransferase [Escherichia coli KTE131]
gi|431620785|gb|ELI89612.1| [protein-PII] uridylyltransferase [Escherichia coli KTE139]
gi|431633508|gb|ELJ01788.1| [protein-PII] uridylyltransferase [Escherichia coli KTE150]
gi|431634794|gb|ELJ03015.1| [protein-PII] uridylyltransferase [Escherichia coli KTE148]
gi|431650467|gb|ELJ17788.1| [protein-PII] uridylyltransferase [Escherichia coli KTE157]
gi|431712755|gb|ELJ77033.1| [protein-PII] uridylyltransferase [Escherichia coli KTE85]
Length = 890
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|82542766|ref|YP_406713.1| PII uridylyl-transferase [Shigella boydii Sb227]
gi|157159632|ref|YP_001456950.1| PII uridylyl-transferase [Escherichia coli HS]
gi|191166326|ref|ZP_03028158.1| protein-P-II uridylyltransferase [Escherichia coli B7A]
gi|193063184|ref|ZP_03044275.1| protein-P-II uridylyltransferase [Escherichia coli E22]
gi|194428269|ref|ZP_03060811.1| protein-P-II uridylyltransferase [Escherichia coli B171]
gi|209917357|ref|YP_002291441.1| PII uridylyl-transferase [Escherichia coli SE11]
gi|218552746|ref|YP_002385659.1| PII uridylyl-transferase [Escherichia coli IAI1]
gi|218693631|ref|YP_002401298.1| PII uridylyl-transferase [Escherichia coli 55989]
gi|260842399|ref|YP_003220177.1| uridylyltransferase [Escherichia coli O103:H2 str. 12009]
gi|293418053|ref|ZP_06660675.1| P-II uridylyltransferase [Escherichia coli B185]
gi|293476824|ref|ZP_06665232.1| protein-P-II uridylyltransferase [Escherichia coli B088]
gi|300816207|ref|ZP_07096430.1| protein-P-II uridylyltransferase [Escherichia coli MS 107-1]
gi|300901986|ref|ZP_07120013.1| protein-P-II uridylyltransferase [Escherichia coli MS 84-1]
gi|300923041|ref|ZP_07139108.1| protein-P-II uridylyltransferase [Escherichia coli MS 182-1]
gi|301305303|ref|ZP_07211399.1| protein-P-II uridylyltransferase [Escherichia coli MS 124-1]
gi|301330035|ref|ZP_07222719.1| protein-P-II uridylyltransferase [Escherichia coli MS 78-1]
gi|309796344|ref|ZP_07690753.1| protein-P-II uridylyltransferase [Escherichia coli MS 145-7]
gi|331651072|ref|ZP_08352100.1| protein-P-II uridylyltransferase [Escherichia coli M718]
gi|332282841|ref|ZP_08395254.1| uridylyltransferase [Shigella sp. D9]
gi|407467621|ref|YP_006785937.1| PII uridylyl-transferase [Escherichia coli O104:H4 str.
2009EL-2071]
gi|407483662|ref|YP_006780811.1| PII uridylyl-transferase [Escherichia coli O104:H4 str. 2011C-3493]
gi|410484202|ref|YP_006771748.1| PII uridylyl-transferase [Escherichia coli O104:H4 str.
2009EL-2050]
gi|415801931|ref|ZP_11499822.1| protein-P-II uridylyltransferase [Escherichia coli E128010]
gi|415832528|ref|ZP_11517955.1| protein-P-II uridylyltransferase [Escherichia coli OK1357]
gi|415864366|ref|ZP_11537460.1| protein-P-II uridylyltransferase [Escherichia coli MS 85-1]
gi|415877377|ref|ZP_11543554.1| protein-P-II uridylyltransferase [Escherichia coli MS 79-10]
gi|416274879|ref|ZP_11643840.1| PII uridylyl-transferase [Shigella dysenteriae CDC 74-1112]
gi|416294321|ref|ZP_11650806.1| PII uridylyl-transferase [Shigella flexneri CDC 796-83]
gi|416342928|ref|ZP_11676932.1| PII uridylyl-transferase [Escherichia coli EC4100B]
gi|417134649|ref|ZP_11979434.1| protein-P-II uridylyltransferase [Escherichia coli 5.0588]
gi|417151596|ref|ZP_11991123.1| protein-P-II uridylyltransferase [Escherichia coli 1.2264]
gi|417152570|ref|ZP_11991361.1| protein-P-II uridylyltransferase [Escherichia coli 96.0497]
gi|417168471|ref|ZP_12000922.1| protein-P-II uridylyltransferase [Escherichia coli 99.0741]
gi|417174527|ref|ZP_12004323.1| protein-P-II uridylyltransferase [Escherichia coli 3.2608]
gi|417181828|ref|ZP_12008664.1| protein-P-II uridylyltransferase [Escherichia coli 93.0624]
gi|417244406|ref|ZP_12038416.1| protein-P-II uridylyltransferase [Escherichia coli 9.0111]
gi|417252574|ref|ZP_12044333.1| protein-P-II uridylyltransferase [Escherichia coli 4.0967]
gi|417273890|ref|ZP_12061235.1| protein-P-II uridylyltransferase [Escherichia coli 2.4168]
gi|417579384|ref|ZP_12230210.1| protein-P-II uridylyltransferase [Escherichia coli STEC_B2F1]
gi|417595014|ref|ZP_12245690.1| protein-P-II uridylyltransferase [Escherichia coli 3030-1]
gi|417606095|ref|ZP_12256628.1| protein-P-II uridylyltransferase [Escherichia coli STEC_DG131-3]
gi|417621396|ref|ZP_12271727.1| protein-P-II uridylyltransferase [Escherichia coli STEC_H.1.8]
gi|417637433|ref|ZP_12287614.1| protein-P-II uridylyltransferase [Escherichia coli TX1999]
gi|417665235|ref|ZP_12314804.1| protein-P-II uridylyltransferase [Escherichia coli STEC_O31]
gi|417680443|ref|ZP_12329830.1| protein-P-II uridylyltransferase [Shigella boydii 3594-74]
gi|417803508|ref|ZP_12450548.1| PII uridylyl-transferase [Escherichia coli O104:H4 str. LB226692]
gi|417831269|ref|ZP_12477797.1| PII uridylyl-transferase [Escherichia coli O104:H4 str. 01-09591]
gi|417864311|ref|ZP_12509357.1| glnD [Escherichia coli O104:H4 str. C227-11]
gi|419168136|ref|ZP_13712537.1| protein-P-II uridylyltransferase [Escherichia coli DEC7A]
gi|419179187|ref|ZP_13722814.1| protein-P-II uridylyltransferase [Escherichia coli DEC7C]
gi|419184646|ref|ZP_13728172.1| protein-P-II uridylyltransferase [Escherichia coli DEC7D]
gi|419189914|ref|ZP_13733387.1| protein-P-II uridylyltransferase [Escherichia coli DEC7E]
gi|419276270|ref|ZP_13818542.1| protein-P-II uridylyltransferase [Escherichia coli DEC10E]
gi|419287677|ref|ZP_13829796.1| protein-P-II uridylyltransferase [Escherichia coli DEC11A]
gi|419292975|ref|ZP_13835037.1| protein-P-II uridylyltransferase [Escherichia coli DEC11B]
gi|419304672|ref|ZP_13846589.1| protein-P-II uridylyltransferase [Escherichia coli DEC11D]
gi|419309707|ref|ZP_13851586.1| protein-P-II uridylyltransferase [Escherichia coli DEC11E]
gi|419315010|ref|ZP_13856843.1| protein-P-II uridylyltransferase [Escherichia coli DEC12A]
gi|419320807|ref|ZP_13862552.1| protein-P-II uridylyltransferase [Escherichia coli DEC12B]
gi|419327009|ref|ZP_13868646.1| protein-P-II uridylyltransferase [Escherichia coli DEC12C]
gi|419332426|ref|ZP_13873993.1| protein-P-II uridylyltransferase [Escherichia coli DEC12D]
gi|419338178|ref|ZP_13879669.1| protein-P-II uridylyltransferase [Escherichia coli DEC12E]
gi|419343833|ref|ZP_13885219.1| protein-P-II uridylyltransferase [Escherichia coli DEC13A]
gi|419348254|ref|ZP_13889609.1| protein-P-II uridylyltransferase [Escherichia coli DEC13B]
gi|419353157|ref|ZP_13894445.1| protein-P-II uridylyltransferase [Escherichia coli DEC13C]
gi|419358502|ref|ZP_13899734.1| protein-P-II uridylyltransferase [Escherichia coli DEC13D]
gi|419363522|ref|ZP_13904706.1| protein-P-II uridylyltransferase [Escherichia coli DEC13E]
gi|419368445|ref|ZP_13909579.1| protein-P-II uridylyltransferase [Escherichia coli DEC14A]
gi|419373603|ref|ZP_13914665.1| protein-P-II uridylyltransferase [Escherichia coli DEC14B]
gi|419379028|ref|ZP_13920011.1| protein-P-II uridylyltransferase [Escherichia coli DEC14C]
gi|419384286|ref|ZP_13925194.1| protein-P-II uridylyltransferase [Escherichia coli DEC14D]
gi|419389581|ref|ZP_13930424.1| protein-P-II uridylyltransferase [Escherichia coli DEC15A]
gi|419394753|ref|ZP_13935541.1| protein-P-II uridylyltransferase [Escherichia coli DEC15B]
gi|419400145|ref|ZP_13940880.1| protein-P-II uridylyltransferase [Escherichia coli DEC15C]
gi|419410476|ref|ZP_13951155.1| protein-P-II uridylyltransferase [Escherichia coli DEC15D]
gi|419410794|ref|ZP_13951471.1| protein-P-II uridylyltransferase [Escherichia coli DEC15E]
gi|419804906|ref|ZP_14330055.1| protein-P-II uridylyltransferase [Escherichia coli AI27]
gi|419865209|ref|ZP_14387598.1| PII uridylyl-transferase [Escherichia coli O103:H25 str. CVM9340]
gi|419870122|ref|ZP_14392259.1| PII uridylyl-transferase [Escherichia coli O103:H2 str. CVM9450]
gi|419951487|ref|ZP_14467678.1| PII uridylyl-transferase [Escherichia coli CUMT8]
gi|420323822|ref|ZP_14825612.1| protein-P-II uridylyltransferase [Shigella flexneri CCH060]
gi|420334427|ref|ZP_14836050.1| protein-P-II uridylyltransferase [Shigella flexneri K-315]
gi|420351040|ref|ZP_14852243.1| protein-P-II uridylyltransferase [Shigella boydii 4444-74]
gi|420383805|ref|ZP_14883197.1| protein-P-II uridylyltransferase [Escherichia coli EPECa12]
gi|420389496|ref|ZP_14888770.1| protein-P-II uridylyltransferase [Escherichia coli EPEC C342-62]
gi|421680885|ref|ZP_16120727.1| protein-P-II uridylyltransferase [Shigella flexneri 1485-80]
gi|422354200|ref|ZP_16434942.1| protein-P-II uridylyltransferase [Escherichia coli MS 117-3]
gi|422761843|ref|ZP_16815601.1| protein-P-II uridylyltransferase [Escherichia coli E1167]
gi|422957493|ref|ZP_16969707.1| [protein-PII] uridylyltransferase [Escherichia coli H494]
gi|422990869|ref|ZP_16981640.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
C227-11]
gi|422992809|ref|ZP_16983573.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
C236-11]
gi|422998018|ref|ZP_16988774.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
09-7901]
gi|423006502|ref|ZP_16997246.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
04-8351]
gi|423008124|ref|ZP_16998862.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-3677]
gi|423022310|ref|ZP_17013013.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4404]
gi|423027465|ref|ZP_17018158.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4522]
gi|423033302|ref|ZP_17023986.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4623]
gi|423036168|ref|ZP_17026842.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4632 C1]
gi|423041288|ref|ZP_17031955.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4632 C2]
gi|423047974|ref|ZP_17038631.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4632 C3]
gi|423056512|ref|ZP_17045317.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4632 C4]
gi|423058523|ref|ZP_17047319.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4632 C5]
gi|425420765|ref|ZP_18802009.1| protein-P-II uridylyltransferase [Escherichia coli 0.1288]
gi|427803239|ref|ZP_18970306.1| protein PII [Escherichia coli chi7122]
gi|427807844|ref|ZP_18974909.1| protein PII; uridylyltransferase acts on regulator of glnA
[Escherichia coli]
gi|429722367|ref|ZP_19257266.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429774445|ref|ZP_19306449.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02030]
gi|429779705|ref|ZP_19311661.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02033-1]
gi|429783760|ref|ZP_19315674.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02092]
gi|429789098|ref|ZP_19320974.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02093]
gi|429795328|ref|ZP_19327155.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02281]
gi|429801254|ref|ZP_19333033.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02318]
gi|429804886|ref|ZP_19336634.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02913]
gi|429809697|ref|ZP_19341400.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-03439]
gi|429815457|ref|ZP_19347117.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-04080]
gi|429820668|ref|ZP_19352283.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-03943]
gi|429906719|ref|ZP_19372689.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429910914|ref|ZP_19376871.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-9941]
gi|429916754|ref|ZP_19382695.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429921792|ref|ZP_19387714.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429927609|ref|ZP_19393516.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429931542|ref|ZP_19397438.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429938085|ref|ZP_19403966.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429938800|ref|ZP_19404674.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429946441|ref|ZP_19412297.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429949089|ref|ZP_19414937.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429957356|ref|ZP_19423185.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec12-0466]
gi|432479490|ref|ZP_19721456.1| [protein-PII] uridylyltransferase [Escherichia coli KTE210]
gi|432808799|ref|ZP_20042709.1| [protein-PII] uridylyltransferase [Escherichia coli KTE91]
gi|432812316|ref|ZP_20046166.1| [protein-PII] uridylyltransferase [Escherichia coli KTE101]
gi|432830141|ref|ZP_20063751.1| [protein-PII] uridylyltransferase [Escherichia coli KTE135]
gi|432856975|ref|ZP_20084226.1| [protein-PII] uridylyltransferase [Escherichia coli KTE144]
gi|432932426|ref|ZP_20132328.1| [protein-PII] uridylyltransferase [Escherichia coli KTE184]
gi|432966307|ref|ZP_20155227.1| [protein-PII] uridylyltransferase [Escherichia coli KTE203]
gi|433128453|ref|ZP_20313941.1| [protein-PII] uridylyltransferase [Escherichia coli KTE163]
gi|433133354|ref|ZP_20318740.1| [protein-PII] uridylyltransferase [Escherichia coli KTE166]
gi|433191955|ref|ZP_20375988.1| [protein-PII] uridylyltransferase [Escherichia coli KTE90]
gi|443616178|ref|YP_007380034.1| PII uridylyl-transferase [Escherichia coli APEC O78]
gi|450209540|ref|ZP_21893955.1| PII uridylyl-transferase [Escherichia coli O08]
gi|91206755|sp|Q325X3.1|GLND_SHIBS RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|166990443|sp|A7ZWB3.1|GLND_ECOHS RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|226723942|sp|B7M1A6.1|GLND_ECO8A RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|238057816|sp|B6HZE1.1|GLND_ECOSE RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|254798832|sp|B7LGM7.1|GLND_ECO55 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|81244177|gb|ABB64885.1| protein PII [Shigella boydii Sb227]
gi|157065312|gb|ABV04567.1| protein-P-II uridylyltransferase [Escherichia coli HS]
gi|190903577|gb|EDV63294.1| protein-P-II uridylyltransferase [Escherichia coli B7A]
gi|192931092|gb|EDV83695.1| protein-P-II uridylyltransferase [Escherichia coli E22]
gi|194413644|gb|EDX29924.1| protein-P-II uridylyltransferase [Escherichia coli B171]
gi|209910616|dbj|BAG75690.1| uridylyltransferase [Escherichia coli SE11]
gi|218350363|emb|CAU96046.1| uridylyltransferase [Escherichia coli 55989]
gi|218359514|emb|CAQ97052.1| uridylyltransferase [Escherichia coli IAI1]
gi|257757546|dbj|BAI29043.1| uridylyltransferase [Escherichia coli O103:H2 str. 12009]
gi|291321277|gb|EFE60719.1| protein-P-II uridylyltransferase [Escherichia coli B088]
gi|291430771|gb|EFF03769.1| P-II uridylyltransferase [Escherichia coli B185]
gi|300405872|gb|EFJ89410.1| protein-P-II uridylyltransferase [Escherichia coli MS 84-1]
gi|300420668|gb|EFK03979.1| protein-P-II uridylyltransferase [Escherichia coli MS 182-1]
gi|300531414|gb|EFK52476.1| protein-P-II uridylyltransferase [Escherichia coli MS 107-1]
gi|300839408|gb|EFK67168.1| protein-P-II uridylyltransferase [Escherichia coli MS 124-1]
gi|300843946|gb|EFK71706.1| protein-P-II uridylyltransferase [Escherichia coli MS 78-1]
gi|308120048|gb|EFO57310.1| protein-P-II uridylyltransferase [Escherichia coli MS 145-7]
gi|315254969|gb|EFU34937.1| protein-P-II uridylyltransferase [Escherichia coli MS 85-1]
gi|320173353|gb|EFW48556.1| PII uridylyl-transferase [Shigella dysenteriae CDC 74-1112]
gi|320186587|gb|EFW61312.1| PII uridylyl-transferase [Shigella flexneri CDC 796-83]
gi|320200309|gb|EFW74895.1| PII uridylyl-transferase [Escherichia coli EC4100B]
gi|323160215|gb|EFZ46174.1| protein-P-II uridylyltransferase [Escherichia coli E128010]
gi|323181673|gb|EFZ67087.1| protein-P-II uridylyltransferase [Escherichia coli OK1357]
gi|324017826|gb|EGB87045.1| protein-P-II uridylyltransferase [Escherichia coli MS 117-3]
gi|324118286|gb|EGC12181.1| protein-P-II uridylyltransferase [Escherichia coli E1167]
gi|331051526|gb|EGI23575.1| protein-P-II uridylyltransferase [Escherichia coli M718]
gi|332098788|gb|EGJ03748.1| protein-P-II uridylyltransferase [Shigella boydii 3594-74]
gi|332105193|gb|EGJ08539.1| uridylyltransferase [Shigella sp. D9]
gi|340736138|gb|EGR65188.1| PII uridylyl-transferase [Escherichia coli O104:H4 str. 01-09591]
gi|340742054|gb|EGR76195.1| PII uridylyl-transferase [Escherichia coli O104:H4 str. LB226692]
gi|341917600|gb|EGT67215.1| glnD [Escherichia coli O104:H4 str. C227-11]
gi|342928012|gb|EGU96734.1| protein-P-II uridylyltransferase [Escherichia coli MS 79-10]
gi|345344682|gb|EGW77047.1| protein-P-II uridylyltransferase [Escherichia coli STEC_B2F1]
gi|345363226|gb|EGW95369.1| protein-P-II uridylyltransferase [Escherichia coli 3030-1]
gi|345366263|gb|EGW98355.1| protein-P-II uridylyltransferase [Escherichia coli STEC_DG131-3]
gi|345387158|gb|EGX16986.1| protein-P-II uridylyltransferase [Escherichia coli STEC_H.1.8]
gi|345395753|gb|EGX25491.1| protein-P-II uridylyltransferase [Escherichia coli TX1999]
gi|354859368|gb|EHF19816.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
04-8351]
gi|354859855|gb|EHF20302.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
C227-11]
gi|354866552|gb|EHF26975.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
C236-11]
gi|354876886|gb|EHF37246.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
09-7901]
gi|354881895|gb|EHF42223.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4404]
gi|354884993|gb|EHF45304.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-3677]
gi|354886440|gb|EHF46727.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4522]
gi|354889956|gb|EHF50203.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4623]
gi|354902156|gb|EHF62278.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4632 C1]
gi|354905482|gb|EHF65565.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4632 C2]
gi|354907989|gb|EHF68045.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4632 C3]
gi|354910260|gb|EHF70288.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4632 C4]
gi|354918461|gb|EHF78417.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-4632 C5]
gi|371598110|gb|EHN86924.1| [protein-PII] uridylyltransferase [Escherichia coli H494]
gi|378019418|gb|EHV82249.1| protein-P-II uridylyltransferase [Escherichia coli DEC7A]
gi|378028734|gb|EHV91351.1| protein-P-II uridylyltransferase [Escherichia coli DEC7C]
gi|378034273|gb|EHV96839.1| protein-P-II uridylyltransferase [Escherichia coli DEC7D]
gi|378043362|gb|EHW05798.1| protein-P-II uridylyltransferase [Escherichia coli DEC7E]
gi|378134831|gb|EHW96146.1| protein-P-II uridylyltransferase [Escherichia coli DEC10E]
gi|378136644|gb|EHW97935.1| protein-P-II uridylyltransferase [Escherichia coli DEC11A]
gi|378147747|gb|EHX08893.1| protein-P-II uridylyltransferase [Escherichia coli DEC11B]
gi|378154326|gb|EHX15402.1| protein-P-II uridylyltransferase [Escherichia coli DEC11D]
gi|378161916|gb|EHX22885.1| protein-P-II uridylyltransferase [Escherichia coli DEC11E]
gi|378176010|gb|EHX36818.1| protein-P-II uridylyltransferase [Escherichia coli DEC12B]
gi|378176507|gb|EHX37313.1| protein-P-II uridylyltransferase [Escherichia coli DEC12A]
gi|378177547|gb|EHX38338.1| protein-P-II uridylyltransferase [Escherichia coli DEC12C]
gi|378190837|gb|EHX51415.1| protein-P-II uridylyltransferase [Escherichia coli DEC13A]
gi|378192309|gb|EHX52872.1| protein-P-II uridylyltransferase [Escherichia coli DEC12D]
gi|378193927|gb|EHX54450.1| protein-P-II uridylyltransferase [Escherichia coli DEC12E]
gi|378205645|gb|EHX66055.1| protein-P-II uridylyltransferase [Escherichia coli DEC13B]
gi|378208604|gb|EHX68985.1| protein-P-II uridylyltransferase [Escherichia coli DEC13D]
gi|378209586|gb|EHX69955.1| protein-P-II uridylyltransferase [Escherichia coli DEC13C]
gi|378220379|gb|EHX80640.1| protein-P-II uridylyltransferase [Escherichia coli DEC13E]
gi|378223387|gb|EHX83611.1| protein-P-II uridylyltransferase [Escherichia coli DEC14A]
gi|378227565|gb|EHX87735.1| protein-P-II uridylyltransferase [Escherichia coli DEC14B]
gi|378235053|gb|EHX95126.1| protein-P-II uridylyltransferase [Escherichia coli DEC14C]
gi|378237817|gb|EHX97835.1| protein-P-II uridylyltransferase [Escherichia coli DEC14D]
gi|378246188|gb|EHY06120.1| protein-P-II uridylyltransferase [Escherichia coli DEC15A]
gi|378249941|gb|EHY09850.1| protein-P-II uridylyltransferase [Escherichia coli DEC15D]
gi|378252378|gb|EHY12269.1| protein-P-II uridylyltransferase [Escherichia coli DEC15C]
gi|378252436|gb|EHY12326.1| protein-P-II uridylyltransferase [Escherichia coli DEC15B]
gi|378261804|gb|EHY21595.1| protein-P-II uridylyltransferase [Escherichia coli DEC15E]
gi|384472082|gb|EIE56144.1| protein-P-II uridylyltransferase [Escherichia coli AI27]
gi|386152503|gb|EIH03792.1| protein-P-II uridylyltransferase [Escherichia coli 5.0588]
gi|386159787|gb|EIH21601.1| protein-P-II uridylyltransferase [Escherichia coli 1.2264]
gi|386169294|gb|EIH35802.1| protein-P-II uridylyltransferase [Escherichia coli 96.0497]
gi|386170519|gb|EIH42572.1| protein-P-II uridylyltransferase [Escherichia coli 99.0741]
gi|386177219|gb|EIH54698.1| protein-P-II uridylyltransferase [Escherichia coli 3.2608]
gi|386184817|gb|EIH67553.1| protein-P-II uridylyltransferase [Escherichia coli 93.0624]
gi|386211071|gb|EII21541.1| protein-P-II uridylyltransferase [Escherichia coli 9.0111]
gi|386216505|gb|EII32994.1| protein-P-II uridylyltransferase [Escherichia coli 4.0967]
gi|386234072|gb|EII66052.1| protein-P-II uridylyltransferase [Escherichia coli 2.4168]
gi|388338103|gb|EIL04580.1| PII uridylyl-transferase [Escherichia coli O103:H25 str. CVM9340]
gi|388340278|gb|EIL06525.1| PII uridylyl-transferase [Escherichia coli O103:H2 str. CVM9450]
gi|388414448|gb|EIL74405.1| PII uridylyl-transferase [Escherichia coli CUMT8]
gi|391257697|gb|EIQ16807.1| protein-P-II uridylyltransferase [Shigella flexneri CCH060]
gi|391268604|gb|EIQ27529.1| protein-P-II uridylyltransferase [Shigella flexneri K-315]
gi|391289874|gb|EIQ48358.1| protein-P-II uridylyltransferase [Shigella boydii 4444-74]
gi|391310154|gb|EIQ67810.1| protein-P-II uridylyltransferase [Escherichia coli EPECa12]
gi|391315729|gb|EIQ73253.1| protein-P-II uridylyltransferase [Escherichia coli EPEC C342-62]
gi|397787170|gb|EJK97999.1| protein-P-II uridylyltransferase [Escherichia coli STEC_O31]
gi|404342120|gb|EJZ68510.1| protein-P-II uridylyltransferase [Shigella flexneri 1485-80]
gi|406779364|gb|AFS58788.1| PII uridylyl-transferase [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407055959|gb|AFS76010.1| PII uridylyl-transferase [Escherichia coli O104:H4 str. 2011C-3493]
gi|407063656|gb|AFS84703.1| PII uridylyl-transferase [Escherichia coli O104:H4 str.
2009EL-2071]
gi|408348565|gb|EKJ62661.1| protein-P-II uridylyltransferase [Escherichia coli 0.1288]
gi|412961421|emb|CCK45326.1| protein PII [Escherichia coli chi7122]
gi|412968023|emb|CCJ42636.1| protein PII; uridylyltransferase acts on regulator of glnA
[Escherichia coli]
gi|429352495|gb|EKY89210.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02030]
gi|429353551|gb|EKY90259.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02033-1]
gi|429354049|gb|EKY90754.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02092]
gi|429367539|gb|EKZ04133.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02093]
gi|429368691|gb|EKZ05277.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02281]
gi|429370917|gb|EKZ07480.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02318]
gi|429383291|gb|EKZ19752.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-02913]
gi|429386140|gb|EKZ22590.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-03439]
gi|429387053|gb|EKZ23498.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-03943]
gi|429398313|gb|EKZ34656.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
11-04080]
gi|429400029|gb|EKZ36347.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429400363|gb|EKZ36680.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429411454|gb|EKZ47664.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429413026|gb|EKZ49216.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429420078|gb|EKZ56212.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429423940|gb|EKZ60047.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429430097|gb|EKZ66164.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429436039|gb|EKZ72056.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429443223|gb|EKZ79176.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429445645|gb|EKZ81586.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429452114|gb|EKZ88001.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec12-0466]
gi|429456965|gb|EKZ92808.1| [protein-PII] uridylyltransferase [Escherichia coli O104:H4 str.
Ec11-9941]
gi|431011628|gb|ELD25703.1| [protein-PII] uridylyltransferase [Escherichia coli KTE210]
gi|431352022|gb|ELG38808.1| [protein-PII] uridylyltransferase [Escherichia coli KTE91]
gi|431358419|gb|ELG45077.1| [protein-PII] uridylyltransferase [Escherichia coli KTE101]
gi|431380806|gb|ELG65445.1| [protein-PII] uridylyltransferase [Escherichia coli KTE135]
gi|431395483|gb|ELG78995.1| [protein-PII] uridylyltransferase [Escherichia coli KTE144]
gi|431457436|gb|ELH37775.1| [protein-PII] uridylyltransferase [Escherichia coli KTE184]
gi|431475668|gb|ELH55472.1| [protein-PII] uridylyltransferase [Escherichia coli KTE203]
gi|431652347|gb|ELJ19501.1| [protein-PII] uridylyltransferase [Escherichia coli KTE163]
gi|431663924|gb|ELJ30676.1| [protein-PII] uridylyltransferase [Escherichia coli KTE166]
gi|431723777|gb|ELJ87722.1| [protein-PII] uridylyltransferase [Escherichia coli KTE90]
gi|443420686|gb|AGC85590.1| PII uridylyl-transferase [Escherichia coli APEC O78]
gi|449323625|gb|EMD13578.1| PII uridylyl-transferase [Escherichia coli O08]
Length = 890
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|444978323|ref|ZP_21295331.1| protein-P-II uridylyltransferase [Escherichia coli ATCC 700728]
gi|444601109|gb|ELV75918.1| protein-P-II uridylyltransferase [Escherichia coli ATCC 700728]
Length = 890
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|433547816|ref|ZP_20503867.1| [Protein-PII] uridylyltransferase [Yersinia enterocolitica IP
10393]
gi|431791242|emb|CCO66907.1| [Protein-PII] uridylyltransferase [Yersinia enterocolitica IP
10393]
Length = 892
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 18/168 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ T I + ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 697 PLVLVSRQATRGGTEIFIWCPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 756
Query: 74 IDCDGKKI---RDKEVIDYIQQRLETD-------ASFAPSLR-----SSVGVMPT--EEH 116
++ DG + R +I +QQ + +P LR + +PT E
Sbjct: 757 LEPDGSPLAQDRHPIIIHALQQAMTRQNYQHPRVRRLSPKLRHFSVPTETNFLPTHNERR 816
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T +E D+PGL + V + ADL ++ +A I T +R + + D
Sbjct: 817 TYLELIALDQPGLLARVGDIFADLGLSLHSARITTIGERVEDLFVLAD 864
>gi|425286680|ref|ZP_18677634.1| protein-P-II uridylyltransferase [Escherichia coli 3006]
gi|408219791|gb|EKI43909.1| protein-P-II uridylyltransferase [Escherichia coli 3006]
Length = 890
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|417632087|ref|ZP_12282313.1| protein-P-II uridylyltransferase [Escherichia coli STEC_MHI813]
gi|345368238|gb|EGX00245.1| protein-P-II uridylyltransferase [Escherichia coli STEC_MHI813]
Length = 890
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|300938573|ref|ZP_07153307.1| protein-P-II uridylyltransferase [Escherichia coli MS 21-1]
gi|432678579|ref|ZP_19913984.1| [protein-PII] uridylyltransferase [Escherichia coli KTE143]
gi|300456486|gb|EFK19979.1| protein-P-II uridylyltransferase [Escherichia coli MS 21-1]
gi|431225535|gb|ELF22735.1| [protein-PII] uridylyltransferase [Escherichia coli KTE143]
Length = 890
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|291280989|ref|YP_003497807.1| [protein-PII] uridylyltransferase [Escherichia coli O55:H7 str.
CB9615]
gi|290760862|gb|ADD54823.1| [Protein-PII] uridylyltransferase [Escherichia coli O55:H7 str.
CB9615]
Length = 831
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 633 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 692
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 693 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 752
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 753 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 794
>gi|218703421|ref|YP_002410940.1| PII uridylyl-transferase [Escherichia coli UMN026]
gi|293403236|ref|ZP_06647333.1| PII uridylyl-transferase [Escherichia coli FVEC1412]
gi|293408259|ref|ZP_06652099.1| hypothetical protein ECEG_03193 [Escherichia coli B354]
gi|298378771|ref|ZP_06988655.1| uridylyltransferase [Escherichia coli FVEC1302]
gi|300900796|ref|ZP_07118939.1| protein-P-II uridylyltransferase [Escherichia coli MS 198-1]
gi|331661541|ref|ZP_08362465.1| protein-P-II uridylyltransferase [Escherichia coli TA143]
gi|331681552|ref|ZP_08382189.1| protein-P-II uridylyltransferase [Escherichia coli H299]
gi|387605642|ref|YP_006094498.1| [protein-PII] uridylyltransferase [Escherichia coli 042]
gi|419935229|ref|ZP_14452314.1| PII uridylyl-transferase [Escherichia coli 576-1]
gi|432351799|ref|ZP_19595112.1| [protein-PII] uridylyltransferase [Escherichia coli KTE2]
gi|432400245|ref|ZP_19643006.1| [protein-PII] uridylyltransferase [Escherichia coli KTE26]
gi|432429276|ref|ZP_19671742.1| [protein-PII] uridylyltransferase [Escherichia coli KTE181]
gi|432464018|ref|ZP_19706138.1| [protein-PII] uridylyltransferase [Escherichia coli KTE204]
gi|432474162|ref|ZP_19716179.1| [protein-PII] uridylyltransferase [Escherichia coli KTE208]
gi|432492469|ref|ZP_19734314.1| [protein-PII] uridylyltransferase [Escherichia coli KTE213]
gi|432520814|ref|ZP_19757985.1| [protein-PII] uridylyltransferase [Escherichia coli KTE228]
gi|432540988|ref|ZP_19777868.1| [protein-PII] uridylyltransferase [Escherichia coli KTE235]
gi|432614969|ref|ZP_19851106.1| [protein-PII] uridylyltransferase [Escherichia coli KTE75]
gi|432634611|ref|ZP_19870518.1| [protein-PII] uridylyltransferase [Escherichia coli KTE80]
gi|432644202|ref|ZP_19880016.1| [protein-PII] uridylyltransferase [Escherichia coli KTE83]
gi|432664322|ref|ZP_19899924.1| [protein-PII] uridylyltransferase [Escherichia coli KTE116]
gi|432768974|ref|ZP_20003353.1| [protein-PII] uridylyltransferase [Escherichia coli KTE50]
gi|432773317|ref|ZP_20007619.1| [protein-PII] uridylyltransferase [Escherichia coli KTE54]
gi|432837725|ref|ZP_20071221.1| [protein-PII] uridylyltransferase [Escherichia coli KTE140]
gi|432883856|ref|ZP_20099059.1| [protein-PII] uridylyltransferase [Escherichia coli KTE158]
gi|432909723|ref|ZP_20116996.1| [protein-PII] uridylyltransferase [Escherichia coli KTE190]
gi|432958894|ref|ZP_20149752.1| [protein-PII] uridylyltransferase [Escherichia coli KTE202]
gi|433017139|ref|ZP_20205415.1| [protein-PII] uridylyltransferase [Escherichia coli KTE105]
gi|433051380|ref|ZP_20238629.1| [protein-PII] uridylyltransferase [Escherichia coli KTE122]
gi|433061373|ref|ZP_20248347.1| [protein-PII] uridylyltransferase [Escherichia coli KTE125]
gi|433066286|ref|ZP_20253141.1| [protein-PII] uridylyltransferase [Escherichia coli KTE128]
gi|433157103|ref|ZP_20341986.1| [protein-PII] uridylyltransferase [Escherichia coli KTE177]
gi|433176526|ref|ZP_20361006.1| [protein-PII] uridylyltransferase [Escherichia coli KTE82]
gi|433201606|ref|ZP_20385423.1| [protein-PII] uridylyltransferase [Escherichia coli KTE95]
gi|226723943|sp|B7N834.1|GLND_ECOLU RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|218430518|emb|CAR11384.1| uridylyltransferase [Escherichia coli UMN026]
gi|284919942|emb|CBG32997.1| [protein-PII] uridylyltransferase [Escherichia coli 042]
gi|291430151|gb|EFF03165.1| PII uridylyl-transferase [Escherichia coli FVEC1412]
gi|291472510|gb|EFF14992.1| hypothetical protein ECEG_03193 [Escherichia coli B354]
gi|298281105|gb|EFI22606.1| uridylyltransferase [Escherichia coli FVEC1302]
gi|300355714|gb|EFJ71584.1| protein-P-II uridylyltransferase [Escherichia coli MS 198-1]
gi|331061456|gb|EGI33419.1| protein-P-II uridylyltransferase [Escherichia coli TA143]
gi|331081773|gb|EGI52934.1| protein-P-II uridylyltransferase [Escherichia coli H299]
gi|388404967|gb|EIL65406.1| PII uridylyl-transferase [Escherichia coli 576-1]
gi|430881378|gb|ELC04632.1| [protein-PII] uridylyltransferase [Escherichia coli KTE2]
gi|430930360|gb|ELC50861.1| [protein-PII] uridylyltransferase [Escherichia coli KTE26]
gi|430948458|gb|ELC68046.1| [protein-PII] uridylyltransferase [Escherichia coli KTE181]
gi|430983321|gb|ELC99984.1| [protein-PII] uridylyltransferase [Escherichia coli KTE204]
gi|431011853|gb|ELD25927.1| [protein-PII] uridylyltransferase [Escherichia coli KTE208]
gi|431014221|gb|ELD27930.1| [protein-PII] uridylyltransferase [Escherichia coli KTE213]
gi|431046197|gb|ELD56316.1| [protein-PII] uridylyltransferase [Escherichia coli KTE228]
gi|431065143|gb|ELD73920.1| [protein-PII] uridylyltransferase [Escherichia coli KTE235]
gi|431158678|gb|ELE59276.1| [protein-PII] uridylyltransferase [Escherichia coli KTE75]
gi|431165463|gb|ELE65816.1| [protein-PII] uridylyltransferase [Escherichia coli KTE80]
gi|431176083|gb|ELE76069.1| [protein-PII] uridylyltransferase [Escherichia coli KTE83]
gi|431205361|gb|ELF03854.1| [protein-PII] uridylyltransferase [Escherichia coli KTE116]
gi|431320132|gb|ELG07780.1| [protein-PII] uridylyltransferase [Escherichia coli KTE50]
gi|431321827|gb|ELG09427.1| [protein-PII] uridylyltransferase [Escherichia coli KTE54]
gi|431392556|gb|ELG76129.1| [protein-PII] uridylyltransferase [Escherichia coli KTE140]
gi|431420782|gb|ELH03058.1| [protein-PII] uridylyltransferase [Escherichia coli KTE158]
gi|431448773|gb|ELH29486.1| [protein-PII] uridylyltransferase [Escherichia coli KTE190]
gi|431483389|gb|ELH63081.1| [protein-PII] uridylyltransferase [Escherichia coli KTE202]
gi|431538071|gb|ELI14176.1| [protein-PII] uridylyltransferase [Escherichia coli KTE105]
gi|431576473|gb|ELI49160.1| [protein-PII] uridylyltransferase [Escherichia coli KTE122]
gi|431589652|gb|ELI60866.1| [protein-PII] uridylyltransferase [Escherichia coli KTE125]
gi|431593148|gb|ELI63712.1| [protein-PII] uridylyltransferase [Escherichia coli KTE128]
gi|431683272|gb|ELJ48910.1| [protein-PII] uridylyltransferase [Escherichia coli KTE177]
gi|431711703|gb|ELJ76016.1| [protein-PII] uridylyltransferase [Escherichia coli KTE82]
gi|431727332|gb|ELJ91092.1| [protein-PII] uridylyltransferase [Escherichia coli KTE95]
Length = 890
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|91209236|ref|YP_539222.1| PII uridylyl-transferase [Escherichia coli UTI89]
gi|117622452|ref|YP_851365.1| PII uridylyl-transferase [Escherichia coli APEC O1]
gi|218557108|ref|YP_002390021.1| PII uridylyl-transferase [Escherichia coli S88]
gi|237704326|ref|ZP_04534807.1| uridylyltransferase [Escherichia sp. 3_2_53FAA]
gi|386597917|ref|YP_006099423.1| protein-P-II uridylyltransferase [Escherichia coli IHE3034]
gi|386607259|ref|YP_006113559.1| PII uridylyl-transferase [Escherichia coli UM146]
gi|417082474|ref|ZP_11950808.1| PII uridylyl-transferase [Escherichia coli cloneA_i1]
gi|419942398|ref|ZP_14459001.1| PII uridylyl-transferase [Escherichia coli HM605]
gi|422360935|ref|ZP_16441563.1| protein-P-II uridylyltransferase [Escherichia coli MS 110-3]
gi|422750443|ref|ZP_16804353.1| protein-P-II uridylyltransferase [Escherichia coli H252]
gi|422756508|ref|ZP_16810331.1| protein-P-II uridylyltransferase [Escherichia coli H263]
gi|422839832|ref|ZP_16887803.1| uridylyltransferase [Escherichia coli H397]
gi|432356526|ref|ZP_19599774.1| [protein-PII] uridylyltransferase [Escherichia coli KTE4]
gi|432366024|ref|ZP_19609159.1| [protein-PII] uridylyltransferase [Escherichia coli KTE5]
gi|432572060|ref|ZP_19808554.1| [protein-PII] uridylyltransferase [Escherichia coli KTE55]
gi|432586496|ref|ZP_19822869.1| [protein-PII] uridylyltransferase [Escherichia coli KTE58]
gi|432596065|ref|ZP_19832355.1| [protein-PII] uridylyltransferase [Escherichia coli KTE62]
gi|432757681|ref|ZP_19992215.1| [protein-PII] uridylyltransferase [Escherichia coli KTE22]
gi|432790750|ref|ZP_20024871.1| [protein-PII] uridylyltransferase [Escherichia coli KTE65]
gi|432819517|ref|ZP_20053232.1| [protein-PII] uridylyltransferase [Escherichia coli KTE118]
gi|433003708|ref|ZP_20192147.1| [protein-PII] uridylyltransferase [Escherichia coli KTE227]
gi|433010915|ref|ZP_20199320.1| [protein-PII] uridylyltransferase [Escherichia coli KTE229]
gi|433152302|ref|ZP_20337276.1| [protein-PII] uridylyltransferase [Escherichia coli KTE176]
gi|433161948|ref|ZP_20346718.1| [protein-PII] uridylyltransferase [Escherichia coli KTE179]
gi|433166883|ref|ZP_20351569.1| [protein-PII] uridylyltransferase [Escherichia coli KTE180]
gi|122424959|sp|Q1RG23.1|GLND_ECOUT RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|166226149|sp|A1A7L1.1|GLND_ECOK1 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|226723940|sp|B7MBE8.1|GLND_ECO45 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|91070810|gb|ABE05691.1| [protein-PII] uridylyltransferase [Escherichia coli UTI89]
gi|115511576|gb|ABI99650.1| PII uridylyl-transferase [Escherichia coli APEC O1]
gi|218363877|emb|CAR01541.1| uridylyltransferase [Escherichia coli S88]
gi|226902238|gb|EEH88497.1| uridylyltransferase [Escherichia sp. 3_2_53FAA]
gi|294490561|gb|ADE89317.1| protein-P-II uridylyltransferase [Escherichia coli IHE3034]
gi|307629743|gb|ADN74047.1| PII uridylyl-transferase [Escherichia coli UM146]
gi|315285236|gb|EFU44681.1| protein-P-II uridylyltransferase [Escherichia coli MS 110-3]
gi|323950834|gb|EGB46711.1| protein-P-II uridylyltransferase [Escherichia coli H252]
gi|323955128|gb|EGB50903.1| protein-P-II uridylyltransferase [Escherichia coli H263]
gi|355353444|gb|EHG02611.1| PII uridylyl-transferase [Escherichia coli cloneA_i1]
gi|371608316|gb|EHN96872.1| uridylyltransferase [Escherichia coli H397]
gi|388422960|gb|EIL82509.1| PII uridylyl-transferase [Escherichia coli HM605]
gi|430880117|gb|ELC03438.1| [protein-PII] uridylyltransferase [Escherichia coli KTE4]
gi|430881131|gb|ELC04393.1| [protein-PII] uridylyltransferase [Escherichia coli KTE5]
gi|431111787|gb|ELE15678.1| [protein-PII] uridylyltransferase [Escherichia coli KTE55]
gi|431124397|gb|ELE27043.1| [protein-PII] uridylyltransferase [Escherichia coli KTE58]
gi|431134661|gb|ELE36610.1| [protein-PII] uridylyltransferase [Escherichia coli KTE62]
gi|431297582|gb|ELF87232.1| [protein-PII] uridylyltransferase [Escherichia coli KTE22]
gi|431333762|gb|ELG20947.1| [protein-PII] uridylyltransferase [Escherichia coli KTE65]
gi|431371276|gb|ELG57061.1| [protein-PII] uridylyltransferase [Escherichia coli KTE118]
gi|431518659|gb|ELH96113.1| [protein-PII] uridylyltransferase [Escherichia coli KTE227]
gi|431519127|gb|ELH96579.1| [protein-PII] uridylyltransferase [Escherichia coli KTE229]
gi|431679116|gb|ELJ45032.1| [protein-PII] uridylyltransferase [Escherichia coli KTE176]
gi|431693339|gb|ELJ58755.1| [protein-PII] uridylyltransferase [Escherichia coli KTE179]
gi|431695148|gb|ELJ60484.1| [protein-PII] uridylyltransferase [Escherichia coli KTE180]
Length = 890
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|422834457|ref|ZP_16882519.1| uridylyltransferase [Escherichia coli E101]
gi|371601977|gb|EHN90696.1| uridylyltransferase [Escherichia coli E101]
Length = 890
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|420378472|ref|ZP_14877976.1| protein-P-II uridylyltransferase [Shigella dysenteriae 225-75]
gi|391307413|gb|EIQ65146.1| protein-P-II uridylyltransferase [Shigella dysenteriae 225-75]
Length = 831
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 633 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 692
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 693 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 752
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 753 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 794
>gi|386311543|ref|YP_006007599.1| [protein-PII] uridylyltransferase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|318606932|emb|CBY28430.1| [protein-PII] uridylyltransferase [Yersinia enterocolitica subsp.
palearctica Y11]
Length = 892
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 18/168 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ T I + ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 697 PLVLVSRQATRGGTEIFICCPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 756
Query: 74 IDCDGKKI---RDKEVIDYIQQRLETD-------ASFAPSLR-----SSVGVMPT--EEH 116
++ DG + R +I +QQ + +P LR + +PT E
Sbjct: 757 LEPDGSPLAQDRHPIIIHALQQAMTRQNYQHPRVRRLSPKLRHFSVPTETNFLPTHNERR 816
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T +E D+PGL + V + ADL ++ +A I T +R + + D
Sbjct: 817 TYLELIALDQPGLLARVGDIFADLGLSLHSARITTIGERVEDLFVLAD 864
>gi|331671675|ref|ZP_08372473.1| protein-P-II uridylyltransferase [Escherichia coli TA280]
gi|331071520|gb|EGI42877.1| protein-P-II uridylyltransferase [Escherichia coli TA280]
Length = 890
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|432390060|ref|ZP_19632926.1| [protein-PII] uridylyltransferase [Escherichia coli KTE21]
gi|432717179|ref|ZP_19952183.1| [protein-PII] uridylyltransferase [Escherichia coli KTE9]
gi|432791392|ref|ZP_20025489.1| [protein-PII] uridylyltransferase [Escherichia coli KTE78]
gi|432797362|ref|ZP_20031391.1| [protein-PII] uridylyltransferase [Escherichia coli KTE79]
gi|432818386|ref|ZP_20052113.1| [protein-PII] uridylyltransferase [Escherichia coli KTE115]
gi|430923673|gb|ELC44408.1| [protein-PII] uridylyltransferase [Escherichia coli KTE21]
gi|431267300|gb|ELF58818.1| [protein-PII] uridylyltransferase [Escherichia coli KTE9]
gi|431343060|gb|ELG30030.1| [protein-PII] uridylyltransferase [Escherichia coli KTE78]
gi|431346576|gb|ELG33481.1| [protein-PII] uridylyltransferase [Escherichia coli KTE79]
gi|431359375|gb|ELG46020.1| [protein-PII] uridylyltransferase [Escherichia coli KTE115]
Length = 890
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|420369740|ref|ZP_14870415.1| HD domain protein, partial [Shigella flexneri 1235-66]
gi|391320953|gb|EIQ77726.1| HD domain protein, partial [Shigella flexneri 1235-66]
Length = 549
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 351 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 410
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 411 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 470
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 471 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 512
>gi|386622578|ref|YP_006142306.1| uridylyltransferase [Escherichia coli O7:K1 str. CE10]
gi|349736316|gb|AEQ11022.1| uridylyltransferase [Escherichia coli O7:K1 str. CE10]
Length = 890
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|238787238|ref|ZP_04631037.1| [Protein-PII] uridylyltransferase [Yersinia frederiksenii ATCC
33641]
gi|238724500|gb|EEQ16141.1| [Protein-PII] uridylyltransferase [Yersinia frederiksenii ATCC
33641]
Length = 892
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 18/168 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V+I T I + S ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 697 PLVLISRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 756
Query: 74 IDCDGKKI-RDKE-VIDYIQQRLETDASFA-PSLR------------SSVGVMPT--EEH 116
++ DG + +D+ +I + Q+ T ++ P +R + +PT E
Sbjct: 757 LEPDGSPLAQDRHPIIRHALQQAMTRTNYQHPRVRRLSSKLRHFSVPTETNFLPTHNERR 816
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T +E D+PGL + V + ADL ++ +A I T +R + + D
Sbjct: 817 TYLELIALDQPGLLARVGEIFADLGLSLHSARITTIGERVEDLFVLAD 864
>gi|338741595|ref|YP_004678557.1| [protein-PII] uridylyltransferase [Hyphomicrobium sp. MC1]
gi|337762158|emb|CCB67993.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Hyphomicrobium sp.
MC1]
Length = 932
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 48/82 (58%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P VVI+N TV++V ++ G+L ++ L+D++L I A++++ G +DVF V
Sbjct: 835 PEVVINNALSDRLTVLEVSGRDRPGLLYELTSALSDLSLDISSAHVTTFGEKAVDVFYVT 894
Query: 75 DCDGKKIRDKEVIDYIQQRLET 96
D GK++ ++ ++ RL +
Sbjct: 895 DLLGKQVINETRQATLRSRLRS 916
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +E +G DRPGL E+ + L+DL ++ +A + T ++A V +VTD G + + R
Sbjct: 848 TVLEVSGRDRPGLLYELTSALSDLSLDISSAHVTTFGEKAVDVFYVTD-LLGKQVINETR 906
Query: 177 LSTIKELLFNVL 188
+T++ L ++L
Sbjct: 907 QATLRSRLRSIL 918
>gi|331645309|ref|ZP_08346420.1| protein-P-II uridylyltransferase [Escherichia coli M605]
gi|417660799|ref|ZP_12310380.1| [Protein-P2] uridylyltransferase [Escherichia coli AA86]
gi|330910017|gb|EGH38527.1| [Protein-P2] uridylyltransferase [Escherichia coli AA86]
gi|331046066|gb|EGI18185.1| protein-P-II uridylyltransferase [Escherichia coli M605]
Length = 890
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|170021480|ref|YP_001726434.1| PII uridylyl-transferase [Escherichia coli ATCC 8739]
gi|194439141|ref|ZP_03071223.1| protein-P-II uridylyltransferase [Escherichia coli 101-1]
gi|251783726|ref|YP_002998030.1| uridylyl-removing enzyme / uridylyltransferase [Escherichia coli
BL21(DE3)]
gi|253774806|ref|YP_003037637.1| PII uridylyl-transferase [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254160286|ref|YP_003043394.1| PII uridylyl-transferase [Escherichia coli B str. REL606]
gi|254287089|ref|YP_003052837.1| PII uridylyl-transferase [Escherichia coli BL21(DE3)]
gi|300932120|ref|ZP_07147406.1| protein-P-II uridylyltransferase [Escherichia coli MS 187-1]
gi|312970266|ref|ZP_07784448.1| protein-P-II uridylyltransferase [Escherichia coli 1827-70]
gi|422788402|ref|ZP_16841139.1| protein-P-II uridylyltransferase [Escherichia coli H489]
gi|442597817|ref|ZP_21015595.1| [Protein-PII] uridylyltransferase [Escherichia coli O5:K4(L):H4
str. ATCC 23502]
gi|189041206|sp|B1IQH4.1|GLND_ECOLC RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|169756408|gb|ACA79107.1| UTP-GlnB uridylyltransferase, GlnD [Escherichia coli ATCC 8739]
gi|194421960|gb|EDX37965.1| protein-P-II uridylyltransferase [Escherichia coli 101-1]
gi|242375999|emb|CAQ30681.1| uridylyl-removing enzyme / uridylyltransferase [Escherichia coli
BL21(DE3)]
gi|253325850|gb|ACT30452.1| UTP-GlnB uridylyltransferase, GlnD [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253972187|gb|ACT37858.1| PII uridylyl-transferase [Escherichia coli B str. REL606]
gi|253976396|gb|ACT42066.1| PII uridylyl-transferase [Escherichia coli BL21(DE3)]
gi|300460131|gb|EFK23624.1| protein-P-II uridylyltransferase [Escherichia coli MS 187-1]
gi|310337764|gb|EFQ02875.1| protein-P-II uridylyltransferase [Escherichia coli 1827-70]
gi|323959927|gb|EGB55574.1| protein-P-II uridylyltransferase [Escherichia coli H489]
gi|441653482|emb|CCQ03811.1| [Protein-PII] uridylyltransferase [Escherichia coli O5:K4(L):H4
str. ATCC 23502]
Length = 890
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGNPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|429064588|ref|ZP_19128488.1| protein-P-II uridylyltransferase [Escherichia coli 99.0672]
gi|427337371|gb|EKW98289.1| protein-P-II uridylyltransferase [Escherichia coli 99.0672]
Length = 890
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|418039549|ref|ZP_12677811.1| protein-P-II uridylyltransferase [Escherichia coli W26]
gi|383477532|gb|EID69449.1| protein-P-II uridylyltransferase [Escherichia coli W26]
Length = 802
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 604 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 663
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 664 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 723
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 724 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 765
>gi|238763982|ref|ZP_04624938.1| [Protein-PII] uridylyltransferase [Yersinia kristensenii ATCC
33638]
gi|238697799|gb|EEP90560.1| [Protein-PII] uridylyltransferase [Yersinia kristensenii ATCC
33638]
Length = 892
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 71/168 (42%), Gaps = 18/168 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNV 73
P V++ T I + ++ + V+ L+ NL + A I ++ G MD F V
Sbjct: 697 PLVLVSRQATRGGTEIFIWCPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIV 756
Query: 74 IDCDGKKI---RDKEVIDYIQQRLETDASFAPSLR------------SSVGVMPT--EEH 116
++ DG + R +I +QQ + P +R + +PT E
Sbjct: 757 LEPDGSPLAQDRHPIIIHALQQAMTRQNYQHPRVRRISPKLRHFSVPTETNFLPTHNERR 816
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
T +E D+PGL + V + ADL ++ +A I T +R + + D
Sbjct: 817 TYLELIALDQPGLLARVGDIFADLGLSLHSARITTIGERVEDLFVLAD 864
>gi|197106924|ref|YP_002132301.1| PII uridylyl-transferase [Phenylobacterium zucineum HLK1]
gi|238690153|sp|B4RC79.1|GLND_PHEZH RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|196480344|gb|ACG79872.1| protein-P-II uridylyltransferase [Phenylobacterium zucineum HLK1]
Length = 938
Score = 46.6 bits (109), Expect = 0.010, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 39/69 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V++DN +TV++ ++ G+L + + ++D L I A+I G +D F V+
Sbjct: 831 PAVMLDNEASETSTVVEASGRDRPGLLAALARTISDAGLSILSAHIDGYGERAVDAFYVV 890
Query: 75 DCDGKKIRD 83
D DG+K+ D
Sbjct: 891 DADGRKLTD 899
Score = 40.0 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 59/137 (43%), Gaps = 22/137 (16%)
Query: 61 SSDGGWFMDVFNVIDCDGKKI--RDKEVIDYIQQRLETDASFAPSLR-----------SS 107
+S G +DVF V D G+ D + + + L A P R ++
Sbjct: 767 TSRAGQALDVFYVQDASGQPFGSHDPRALARLAETLACAARGEPVAREPRKPQDLGRTAA 826
Query: 108 VGVMP--------TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAV 159
+ P +E T +E +G DRPGL + + ++D ++++A I + +RA
Sbjct: 827 FAITPAVMLDNEASETSTVVEASGRDRPGLLAALARTISDAGLSILSAHIDGYGERAVDA 886
Query: 160 VHVTDHSTGYAIKDPKR 176
+V D + G + D ++
Sbjct: 887 FYVVD-ADGRKLTDARK 902
>gi|194433447|ref|ZP_03065726.1| protein-P-II uridylyltransferase [Shigella dysenteriae 1012]
gi|416284601|ref|ZP_11647351.1| PII uridylyl-transferase [Shigella boydii ATCC 9905]
gi|417670845|ref|ZP_12320347.1| protein-P-II uridylyltransferase [Shigella dysenteriae 155-74]
gi|417687946|ref|ZP_12337198.1| protein-P-II uridylyltransferase [Shigella boydii 5216-82]
gi|420345258|ref|ZP_14846693.1| protein-P-II uridylyltransferase [Shigella boydii 965-58]
gi|194418375|gb|EDX34465.1| protein-P-II uridylyltransferase [Shigella dysenteriae 1012]
gi|320179908|gb|EFW54852.1| PII uridylyl-transferase [Shigella boydii ATCC 9905]
gi|332095208|gb|EGJ00237.1| protein-P-II uridylyltransferase [Shigella boydii 5216-82]
gi|332098225|gb|EGJ03198.1| protein-P-II uridylyltransferase [Shigella dysenteriae 155-74]
gi|391277041|gb|EIQ35802.1| protein-P-II uridylyltransferase [Shigella boydii 965-58]
Length = 890
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|422971431|ref|ZP_16974706.1| [protein-PII] uridylyltransferase [Escherichia coli TA124]
gi|371598780|gb|EHN87575.1| [protein-PII] uridylyltransferase [Escherichia coli TA124]
Length = 890
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|300919730|ref|ZP_07136216.1| protein-P-II uridylyltransferase [Escherichia coli MS 115-1]
gi|432529467|ref|ZP_19766525.1| [protein-PII] uridylyltransferase [Escherichia coli KTE233]
gi|432532380|ref|ZP_19769388.1| [protein-PII] uridylyltransferase [Escherichia coli KTE234]
gi|300413230|gb|EFJ96540.1| protein-P-II uridylyltransferase [Escherichia coli MS 115-1]
gi|431057805|gb|ELD67223.1| [protein-PII] uridylyltransferase [Escherichia coli KTE233]
gi|431064861|gb|ELD73719.1| [protein-PII] uridylyltransferase [Escherichia coli KTE234]
Length = 890
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|226494031|ref|NP_001150201.1| LOC100283831 [Zea mays]
gi|195637534|gb|ACG38235.1| amino acid binding protein [Zea mays]
gi|414589018|tpg|DAA39589.1| TPA: amino acid binding protein [Zea mays]
Length = 433
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 7/141 (4%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDVFNVI 74
V +DN+ T+I++ + G+L V++++ D N+ I + Y S +G +D+F V
Sbjct: 255 VTMDNSLSPAHTLIQIQCGDHKGLLYDVMRIVKDCNIQISYGRFYASQNGRCEIDLFAV- 313
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFS 131
DGKKI D+ + RL + P + V P E +E +G RP +F
Sbjct: 314 QSDGKKILDQHRQRALCCRLRMELR-RPLHVALVNRGPDTELLVANPVEVSGKGRPLVFY 372
Query: 132 EVCAVLADLHCNVVNAEIWTH 152
++ L +L + AEI H
Sbjct: 373 DITLALKNLQRRIFLAEIGRH 393
>gi|441145462|ref|ZP_20963771.1| PII uridylyl-transferase [Streptomyces rimosus subsp. rimosus ATCC
10970]
gi|440621082|gb|ELQ84103.1| PII uridylyl-transferase [Streptomyces rimosus subsp. rimosus ATCC
10970]
Length = 749
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 2 DDEYAKLIRRMN--PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAY 59
+ YA+ R + PPRV + + ATVI+V + + G+L ++ + L + ++ A+
Sbjct: 650 EQAYARRSRGVQAPPPRVTVAPGSSQSATVIEVRAQDAQGLLHRIGRALEAAGVTVRSAH 709
Query: 60 ISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
+S+ G +D F V G+ + D + Q
Sbjct: 710 VSTLGANAVDAFYVTTEKGEPLPDAAATEVAQ 741
>gi|15799849|ref|NP_285861.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. EDL933]
gi|15829423|ref|NP_308196.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. Sakai]
gi|168751385|ref|ZP_02776407.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4113]
gi|168755779|ref|ZP_02780786.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4401]
gi|168764327|ref|ZP_02789334.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4501]
gi|168770361|ref|ZP_02795368.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4486]
gi|168777003|ref|ZP_02802010.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4196]
gi|168782058|ref|ZP_02807065.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4076]
gi|168789275|ref|ZP_02814282.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC869]
gi|168802321|ref|ZP_02827328.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC508]
gi|195938152|ref|ZP_03083534.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. EC4024]
gi|208807602|ref|ZP_03249939.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4206]
gi|208814167|ref|ZP_03255496.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4045]
gi|208819098|ref|ZP_03259418.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4042]
gi|209399551|ref|YP_002268774.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. EC4115]
gi|217325875|ref|ZP_03441959.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
TW14588]
gi|254791300|ref|YP_003076137.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. TW14359]
gi|261226921|ref|ZP_05941202.1| uridylyltransferase/uridylyl-removing enzyme [Escherichia coli
O157:H7 str. FRIK2000]
gi|261255325|ref|ZP_05947858.1| uridylyltransferase/uridylyl-removing enzyme [Escherichia coli
O157:H7 str. FRIK966]
gi|387505094|ref|YP_006157350.1| PII uridylyl-transferase [Escherichia coli O55:H7 str. RM12579]
gi|387880725|ref|YP_006311027.1| PII uridylyl-transferase [Escherichia coli Xuzhou21]
gi|416314050|ref|ZP_11658508.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. 1044]
gi|416318952|ref|ZP_11661504.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. EC1212]
gi|416325842|ref|ZP_11666166.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. 1125]
gi|416777817|ref|ZP_11875457.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. G5101]
gi|416790006|ref|ZP_11880902.1| PII uridylyl-transferase [Escherichia coli O157:H- str. 493-89]
gi|416795821|ref|ZP_11883363.1| PII uridylyl-transferase [Escherichia coli O157:H- str. H 2687]
gi|416807850|ref|ZP_11888189.1| PII uridylyl-transferase [Escherichia coli O55:H7 str. 3256-97]
gi|416818999|ref|ZP_11893069.1| PII uridylyl-transferase [Escherichia coli O55:H7 str. USDA 5905]
gi|416828336|ref|ZP_11897935.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. LSU-61]
gi|419048381|ref|ZP_13595306.1| protein-P-II uridylyltransferase [Escherichia coli DEC3A]
gi|419048741|ref|ZP_13595662.1| protein-P-II uridylyltransferase [Escherichia coli DEC3B]
gi|419054817|ref|ZP_13601678.1| protein-P-II uridylyltransferase [Escherichia coli DEC3C]
gi|419060372|ref|ZP_13607160.1| protein-P-II uridylyltransferase [Escherichia coli DEC3D]
gi|419066204|ref|ZP_13612894.1| protein-P-II uridylyltransferase [Escherichia coli DEC3E]
gi|419073004|ref|ZP_13618580.1| protein-P-II uridylyltransferase [Escherichia coli DEC3F]
gi|419078439|ref|ZP_13623927.1| protein-P-II uridylyltransferase [Escherichia coli DEC4A]
gi|419084088|ref|ZP_13629507.1| protein-P-II uridylyltransferase [Escherichia coli DEC4B]
gi|419090146|ref|ZP_13635468.1| protein-P-II uridylyltransferase [Escherichia coli DEC4C]
gi|419101488|ref|ZP_13646669.1| protein-P-II uridylyltransferase [Escherichia coli DEC4D]
gi|419101726|ref|ZP_13646895.1| protein-P-II uridylyltransferase [Escherichia coli DEC4E]
gi|419112831|ref|ZP_13657869.1| protein-P-II uridylyltransferase [Escherichia coli DEC4F]
gi|419112988|ref|ZP_13658024.1| protein-P-II uridylyltransferase [Escherichia coli DEC5A]
gi|419118495|ref|ZP_13663483.1| protein-P-II uridylyltransferase [Escherichia coli DEC5B]
gi|419124056|ref|ZP_13668966.1| protein-P-II uridylyltransferase [Escherichia coli DEC5C]
gi|419129732|ref|ZP_13674589.1| protein-P-II uridylyltransferase [Escherichia coli DEC5D]
gi|420267202|ref|ZP_14769613.1| protein-P-II uridylyltransferase [Escherichia coli PA22]
gi|420273138|ref|ZP_14775473.1| protein-P-II uridylyltransferase [Escherichia coli PA40]
gi|420283589|ref|ZP_14785814.1| protein-P-II uridylyltransferase [Escherichia coli TW06591]
gi|420284494|ref|ZP_14786714.1| protein-P-II uridylyltransferase [Escherichia coli TW10246]
gi|420290188|ref|ZP_14792357.1| protein-P-II uridylyltransferase [Escherichia coli TW11039]
gi|420295910|ref|ZP_14798008.1| protein-P-II uridylyltransferase [Escherichia coli TW09109]
gi|420301646|ref|ZP_14803681.1| protein-P-II uridylyltransferase [Escherichia coli TW10119]
gi|420307199|ref|ZP_14809175.1| protein-P-II uridylyltransferase [Escherichia coli EC1738]
gi|420312798|ref|ZP_14814713.1| protein-P-II uridylyltransferase [Escherichia coli EC1734]
gi|421810312|ref|ZP_16246132.1| protein-P-II uridylyltransferase [Escherichia coli 8.0416]
gi|421816385|ref|ZP_16251958.1| protein-P-II uridylyltransferase [Escherichia coli 10.0821]
gi|421821778|ref|ZP_16257223.1| protein-P-II uridylyltransferase [Escherichia coli FRIK920]
gi|421828531|ref|ZP_16263863.1| protein-P-II uridylyltransferase [Escherichia coli PA7]
gi|423652531|ref|ZP_17627935.1| protein-P-II uridylyltransferase [Escherichia coli PA31]
gi|424074927|ref|ZP_17812319.1| protein-P-II uridylyltransferase [Escherichia coli FDA505]
gi|424081177|ref|ZP_17818084.1| protein-P-II uridylyltransferase [Escherichia coli FDA517]
gi|424087853|ref|ZP_17824155.1| protein-P-II uridylyltransferase [Escherichia coli FRIK1996]
gi|424094063|ref|ZP_17829876.1| protein-P-II uridylyltransferase [Escherichia coli FRIK1985]
gi|424100476|ref|ZP_17835685.1| protein-P-II uridylyltransferase [Escherichia coli FRIK1990]
gi|424107301|ref|ZP_17841922.1| protein-P-II uridylyltransferase [Escherichia coli 93-001]
gi|424113274|ref|ZP_17847473.1| protein-P-II uridylyltransferase [Escherichia coli PA3]
gi|424119403|ref|ZP_17853162.1| protein-P-II uridylyltransferase [Escherichia coli PA5]
gi|424125620|ref|ZP_17858862.1| protein-P-II uridylyltransferase [Escherichia coli PA9]
gi|424131627|ref|ZP_17864483.1| protein-P-II uridylyltransferase [Escherichia coli PA10]
gi|424138240|ref|ZP_17870582.1| protein-P-II uridylyltransferase [Escherichia coli PA14]
gi|424144694|ref|ZP_17876502.1| protein-P-II uridylyltransferase [Escherichia coli PA15]
gi|424150840|ref|ZP_17882146.1| protein-P-II uridylyltransferase [Escherichia coli PA24]
gi|424260192|ref|ZP_17893128.1| protein-P-II uridylyltransferase [Escherichia coli PA25]
gi|424260877|ref|ZP_17893463.1| protein-P-II uridylyltransferase [Escherichia coli PA28]
gi|424417115|ref|ZP_17899235.1| protein-P-II uridylyltransferase [Escherichia coli PA32]
gi|424453238|ref|ZP_17904825.1| protein-P-II uridylyltransferase [Escherichia coli PA33]
gi|424459517|ref|ZP_17910525.1| protein-P-II uridylyltransferase [Escherichia coli PA39]
gi|424465979|ref|ZP_17916216.1| protein-P-II uridylyltransferase [Escherichia coli PA41]
gi|424472579|ref|ZP_17922291.1| protein-P-II uridylyltransferase [Escherichia coli PA42]
gi|424478549|ref|ZP_17927838.1| protein-P-II uridylyltransferase [Escherichia coli TW07945]
gi|424484575|ref|ZP_17933494.1| protein-P-II uridylyltransferase [Escherichia coli TW09098]
gi|424490668|ref|ZP_17939142.1| protein-P-II uridylyltransferase [Escherichia coli TW09195]
gi|424497789|ref|ZP_17945112.1| protein-P-II uridylyltransferase [Escherichia coli EC4203]
gi|424504035|ref|ZP_17950860.1| protein-P-II uridylyltransferase [Escherichia coli EC4196]
gi|424510277|ref|ZP_17956580.1| protein-P-II uridylyltransferase [Escherichia coli TW14313]
gi|424517858|ref|ZP_17962332.1| protein-P-II uridylyltransferase [Escherichia coli TW14301]
gi|424523686|ref|ZP_17967753.1| protein-P-II uridylyltransferase [Escherichia coli EC4421]
gi|424529892|ref|ZP_17973561.1| protein-P-II uridylyltransferase [Escherichia coli EC4422]
gi|424535863|ref|ZP_17979171.1| protein-P-II uridylyltransferase [Escherichia coli EC4013]
gi|424541751|ref|ZP_17984636.1| protein-P-II uridylyltransferase [Escherichia coli EC4402]
gi|424548076|ref|ZP_17990338.1| protein-P-II uridylyltransferase [Escherichia coli EC4439]
gi|424554365|ref|ZP_17996133.1| protein-P-II uridylyltransferase [Escherichia coli EC4436]
gi|424560711|ref|ZP_18002037.1| protein-P-II uridylyltransferase [Escherichia coli EC4437]
gi|424566721|ref|ZP_18007687.1| protein-P-II uridylyltransferase [Escherichia coli EC4448]
gi|424572919|ref|ZP_18013390.1| protein-P-II uridylyltransferase [Escherichia coli EC1845]
gi|424584747|ref|ZP_18024367.1| protein-P-II uridylyltransferase [Escherichia coli EC1863]
gi|425095561|ref|ZP_18498621.1| protein-P-II uridylyltransferase [Escherichia coli 3.4870]
gi|425101644|ref|ZP_18504332.1| protein-P-II uridylyltransferase [Escherichia coli 5.2239]
gi|425107502|ref|ZP_18509787.1| protein-P-II uridylyltransferase [Escherichia coli 6.0172]
gi|425123314|ref|ZP_18524929.1| protein-P-II uridylyltransferase [Escherichia coli 8.0586]
gi|425129340|ref|ZP_18530483.1| protein-P-II uridylyltransferase [Escherichia coli 8.2524]
gi|425135682|ref|ZP_18536451.1| protein-P-II uridylyltransferase [Escherichia coli 10.0833]
gi|425141628|ref|ZP_18541960.1| protein-P-II uridylyltransferase [Escherichia coli 10.0869]
gi|425147906|ref|ZP_18547843.1| protein-P-II uridylyltransferase [Escherichia coli 88.0221]
gi|425153520|ref|ZP_18553107.1| protein-P-II uridylyltransferase [Escherichia coli PA34]
gi|425159981|ref|ZP_18559191.1| protein-P-II uridylyltransferase [Escherichia coli FDA506]
gi|425165496|ref|ZP_18564339.1| protein-P-II uridylyltransferase [Escherichia coli FDA507]
gi|425171783|ref|ZP_18570220.1| protein-P-II uridylyltransferase [Escherichia coli FDA504]
gi|425177585|ref|ZP_18575672.1| protein-P-II uridylyltransferase [Escherichia coli FRIK1999]
gi|425183809|ref|ZP_18581469.1| protein-P-II uridylyltransferase [Escherichia coli FRIK1997]
gi|425190542|ref|ZP_18587701.1| protein-P-II uridylyltransferase [Escherichia coli NE1487]
gi|425196839|ref|ZP_18593531.1| protein-P-II uridylyltransferase [Escherichia coli NE037]
gi|425203537|ref|ZP_18599699.1| protein-P-II uridylyltransferase [Escherichia coli FRIK2001]
gi|425209312|ref|ZP_18605084.1| protein-P-II uridylyltransferase [Escherichia coli PA4]
gi|425215349|ref|ZP_18610703.1| protein-P-II uridylyltransferase [Escherichia coli PA23]
gi|425221916|ref|ZP_18616811.1| protein-P-II uridylyltransferase [Escherichia coli PA49]
gi|425228167|ref|ZP_18622599.1| protein-P-II uridylyltransferase [Escherichia coli PA45]
gi|425234467|ref|ZP_18628461.1| protein-P-II uridylyltransferase [Escherichia coli TT12B]
gi|425240444|ref|ZP_18634113.1| protein-P-II uridylyltransferase [Escherichia coli MA6]
gi|425246522|ref|ZP_18639761.1| protein-P-II uridylyltransferase [Escherichia coli 5905]
gi|425252312|ref|ZP_18645231.1| protein-P-II uridylyltransferase [Escherichia coli CB7326]
gi|425258646|ref|ZP_18651051.1| protein-P-II uridylyltransferase [Escherichia coli EC96038]
gi|425264761|ref|ZP_18656717.1| protein-P-II uridylyltransferase [Escherichia coli 5412]
gi|425292144|ref|ZP_18682782.1| protein-P-II uridylyltransferase [Escherichia coli PA38]
gi|425308922|ref|ZP_18698434.1| protein-P-II uridylyltransferase [Escherichia coli EC1735]
gi|425314850|ref|ZP_18703968.1| protein-P-II uridylyltransferase [Escherichia coli EC1736]
gi|425320927|ref|ZP_18709647.1| protein-P-II uridylyltransferase [Escherichia coli EC1737]
gi|425327087|ref|ZP_18715359.1| protein-P-II uridylyltransferase [Escherichia coli EC1846]
gi|425333276|ref|ZP_18721045.1| protein-P-II uridylyltransferase [Escherichia coli EC1847]
gi|425339695|ref|ZP_18726976.1| protein-P-II uridylyltransferase [Escherichia coli EC1848]
gi|425345573|ref|ZP_18732421.1| protein-P-II uridylyltransferase [Escherichia coli EC1849]
gi|425351789|ref|ZP_18738210.1| protein-P-II uridylyltransferase [Escherichia coli EC1850]
gi|425357774|ref|ZP_18743788.1| protein-P-II uridylyltransferase [Escherichia coli EC1856]
gi|425363888|ref|ZP_18749490.1| protein-P-II uridylyltransferase [Escherichia coli EC1862]
gi|425370323|ref|ZP_18755329.1| protein-P-II uridylyltransferase [Escherichia coli EC1864]
gi|425389175|ref|ZP_18772709.1| protein-P-II uridylyltransferase [Escherichia coli EC1866]
gi|425389820|ref|ZP_18773315.1| protein-P-II uridylyltransferase [Escherichia coli EC1868]
gi|425395943|ref|ZP_18779023.1| protein-P-II uridylyltransferase [Escherichia coli EC1869]
gi|425408099|ref|ZP_18790291.1| protein-P-II uridylyltransferase [Escherichia coli EC1870]
gi|425408474|ref|ZP_18790663.1| protein-P-II uridylyltransferase [Escherichia coli NE098]
gi|425414743|ref|ZP_18796414.1| protein-P-II uridylyltransferase [Escherichia coli FRIK523]
gi|425425892|ref|ZP_18806977.1| protein-P-II uridylyltransferase [Escherichia coli 0.1304]
gi|428944524|ref|ZP_19017216.1| protein-P-II uridylyltransferase [Escherichia coli 88.1467]
gi|428950698|ref|ZP_19022879.1| protein-P-II uridylyltransferase [Escherichia coli 88.1042]
gi|428956545|ref|ZP_19028293.1| protein-P-II uridylyltransferase [Escherichia coli 89.0511]
gi|428962912|ref|ZP_19034133.1| protein-P-II uridylyltransferase [Escherichia coli 90.0091]
gi|428968975|ref|ZP_19039642.1| protein-P-II uridylyltransferase [Escherichia coli 90.0039]
gi|428975386|ref|ZP_19045597.1| protein-P-II uridylyltransferase [Escherichia coli 90.2281]
gi|428981202|ref|ZP_19050973.1| protein-P-II uridylyltransferase [Escherichia coli 93.0055]
gi|428987500|ref|ZP_19056827.1| protein-P-II uridylyltransferase [Escherichia coli 93.0056]
gi|428993311|ref|ZP_19062255.1| protein-P-II uridylyltransferase [Escherichia coli 94.0618]
gi|428999401|ref|ZP_19067951.1| protein-P-II uridylyltransferase [Escherichia coli 95.0183]
gi|429005639|ref|ZP_19073608.1| protein-P-II uridylyltransferase [Escherichia coli 95.1288]
gi|429012001|ref|ZP_19079290.1| protein-P-II uridylyltransferase [Escherichia coli 95.0943]
gi|429018224|ref|ZP_19085040.1| protein-P-II uridylyltransferase [Escherichia coli 96.0428]
gi|429023882|ref|ZP_19090333.1| protein-P-II uridylyltransferase [Escherichia coli 96.0427]
gi|429030186|ref|ZP_19096095.1| protein-P-II uridylyltransferase [Escherichia coli 96.0939]
gi|429036339|ref|ZP_19101818.1| protein-P-II uridylyltransferase [Escherichia coli 96.0932]
gi|429042371|ref|ZP_19107409.1| protein-P-II uridylyltransferase [Escherichia coli 96.0107]
gi|429048143|ref|ZP_19112811.1| protein-P-II uridylyltransferase [Escherichia coli 97.0003]
gi|429053506|ref|ZP_19118022.1| protein-P-II uridylyltransferase [Escherichia coli 97.1742]
gi|429059207|ref|ZP_19123377.1| protein-P-II uridylyltransferase [Escherichia coli 97.0007]
gi|429071207|ref|ZP_19134575.1| protein-P-II uridylyltransferase [Escherichia coli 99.0678]
gi|429076437|ref|ZP_19139667.1| protein-P-II uridylyltransferase [Escherichia coli 99.0713]
gi|429823649|ref|ZP_19355206.1| protein-P-II uridylyltransferase [Escherichia coli 96.0109]
gi|429830020|ref|ZP_19360937.1| protein-P-II uridylyltransferase [Escherichia coli 97.0010]
gi|444922365|ref|ZP_21242129.1| protein-P-II uridylyltransferase [Escherichia coli 09BKT078844]
gi|444928682|ref|ZP_21247854.1| protein-P-II uridylyltransferase [Escherichia coli 99.0814]
gi|444934081|ref|ZP_21253045.1| protein-P-II uridylyltransferase [Escherichia coli 99.0815]
gi|444939649|ref|ZP_21258319.1| protein-P-II uridylyltransferase [Escherichia coli 99.0816]
gi|444945199|ref|ZP_21263637.1| protein-P-II uridylyltransferase [Escherichia coli 99.0839]
gi|444950772|ref|ZP_21269016.1| protein-P-II uridylyltransferase [Escherichia coli 99.0848]
gi|444956246|ref|ZP_21274270.1| protein-P-II uridylyltransferase [Escherichia coli 99.1753]
gi|444961561|ref|ZP_21279334.1| protein-P-II uridylyltransferase [Escherichia coli 99.1775]
gi|444967308|ref|ZP_21284794.1| protein-P-II uridylyltransferase [Escherichia coli 99.1793]
gi|444972814|ref|ZP_21290118.1| protein-P-II uridylyltransferase [Escherichia coli 99.1805]
gi|444988886|ref|ZP_21305637.1| protein-P-II uridylyltransferase [Escherichia coli PA19]
gi|444994199|ref|ZP_21310810.1| protein-P-II uridylyltransferase [Escherichia coli PA13]
gi|444999715|ref|ZP_21316190.1| protein-P-II uridylyltransferase [Escherichia coli PA2]
gi|445005176|ref|ZP_21321530.1| protein-P-II uridylyltransferase [Escherichia coli PA47]
gi|445010355|ref|ZP_21326561.1| protein-P-II uridylyltransferase [Escherichia coli PA48]
gi|445016118|ref|ZP_21332179.1| protein-P-II uridylyltransferase [Escherichia coli PA8]
gi|445021590|ref|ZP_21337524.1| protein-P-II uridylyltransferase [Escherichia coli 7.1982]
gi|445026833|ref|ZP_21342622.1| protein-P-II uridylyltransferase [Escherichia coli 99.1781]
gi|445032307|ref|ZP_21347945.1| protein-P-II uridylyltransferase [Escherichia coli 99.1762]
gi|445038003|ref|ZP_21353486.1| protein-P-II uridylyltransferase [Escherichia coli PA35]
gi|445043174|ref|ZP_21358523.1| protein-P-II uridylyltransferase [Escherichia coli 3.4880]
gi|445048826|ref|ZP_21364009.1| protein-P-II uridylyltransferase [Escherichia coli 95.0083]
gi|445054446|ref|ZP_21369408.1| protein-P-II uridylyltransferase [Escherichia coli 99.0670]
gi|452969988|ref|ZP_21968215.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. EC4009]
gi|21362567|sp|Q8X8Y6.1|GLND_ECO57 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|238057815|sp|B5Z0E5.1|GLND_ECO5E RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|12512889|gb|AAG54469.1|AE005192_11 protein PII; uridylyltransferase acts on regulator of glnA
[Escherichia coli O157:H7 str. EDL933]
gi|13359625|dbj|BAB33592.1| protein PII-uridylyltransferase [Escherichia coli O157:H7 str.
Sakai]
gi|187767697|gb|EDU31541.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4196]
gi|188014575|gb|EDU52697.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4113]
gi|189000436|gb|EDU69422.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4076]
gi|189357031|gb|EDU75450.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4401]
gi|189360712|gb|EDU79131.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4486]
gi|189365647|gb|EDU84063.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4501]
gi|189371115|gb|EDU89531.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC869]
gi|189375685|gb|EDU94101.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC508]
gi|208727403|gb|EDZ77004.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4206]
gi|208735444|gb|EDZ84131.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4045]
gi|208739221|gb|EDZ86903.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4042]
gi|209160951|gb|ACI38384.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
EC4115]
gi|209745874|gb|ACI71244.1| protein PII-uridylyltransferase [Escherichia coli]
gi|209745876|gb|ACI71245.1| protein PII-uridylyltransferase [Escherichia coli]
gi|209745878|gb|ACI71246.1| protein PII-uridylyltransferase [Escherichia coli]
gi|209745880|gb|ACI71247.1| protein PII-uridylyltransferase [Escherichia coli]
gi|209745882|gb|ACI71248.1| protein PII-uridylyltransferase [Escherichia coli]
gi|217322096|gb|EEC30520.1| protein-P-II uridylyltransferase [Escherichia coli O157:H7 str.
TW14588]
gi|254590700|gb|ACT70061.1| uridylyltransferase/uridylyl-removing enzyme [Escherichia coli
O157:H7 str. TW14359]
gi|320190308|gb|EFW64958.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. EC1212]
gi|320639973|gb|EFX09558.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. G5101]
gi|320644743|gb|EFX13787.1| PII uridylyl-transferase [Escherichia coli O157:H- str. 493-89]
gi|320652899|gb|EFX21137.1| PII uridylyl-transferase [Escherichia coli O157:H- str. H 2687]
gi|320658287|gb|EFX26016.1| PII uridylyl-transferase [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320663597|gb|EFX30881.1| PII uridylyl-transferase [Escherichia coli O55:H7 str. USDA 5905]
gi|320668910|gb|EFX35705.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. LSU-61]
gi|326339779|gb|EGD63587.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. 1044]
gi|326345114|gb|EGD68857.1| PII uridylyl-transferase [Escherichia coli O157:H7 str. 1125]
gi|374357088|gb|AEZ38795.1| PII uridylyl-transferase [Escherichia coli O55:H7 str. RM12579]
gi|377887402|gb|EHU51879.1| protein-P-II uridylyltransferase [Escherichia coli DEC3A]
gi|377902935|gb|EHU67234.1| protein-P-II uridylyltransferase [Escherichia coli DEC3B]
gi|377915444|gb|EHU79553.1| protein-P-II uridylyltransferase [Escherichia coli DEC3C]
gi|377919721|gb|EHU83759.1| protein-P-II uridylyltransferase [Escherichia coli DEC3D]
gi|377921265|gb|EHU85265.1| protein-P-II uridylyltransferase [Escherichia coli DEC3E]
gi|377933579|gb|EHU97423.1| protein-P-II uridylyltransferase [Escherichia coli DEC3F]
gi|377934957|gb|EHU98782.1| protein-P-II uridylyltransferase [Escherichia coli DEC4A]
gi|377936044|gb|EHU99838.1| protein-P-II uridylyltransferase [Escherichia coli DEC4D]
gi|377941318|gb|EHV05060.1| protein-P-II uridylyltransferase [Escherichia coli DEC4B]
gi|377950853|gb|EHV14474.1| protein-P-II uridylyltransferase [Escherichia coli DEC4C]
gi|377951904|gb|EHV15512.1| protein-P-II uridylyltransferase [Escherichia coli DEC4F]
gi|377955947|gb|EHV19499.1| protein-P-II uridylyltransferase [Escherichia coli DEC4E]
gi|377966841|gb|EHV30251.1| protein-P-II uridylyltransferase [Escherichia coli DEC5A]
gi|377974726|gb|EHV38053.1| protein-P-II uridylyltransferase [Escherichia coli DEC5B]
gi|377982977|gb|EHV46227.1| protein-P-II uridylyltransferase [Escherichia coli DEC5D]
gi|377983775|gb|EHV47017.1| protein-P-II uridylyltransferase [Escherichia coli DEC5C]
gi|386794183|gb|AFJ27217.1| PII uridylyl-transferase [Escherichia coli Xuzhou21]
gi|390651635|gb|EIN29906.1| protein-P-II uridylyltransferase [Escherichia coli FRIK1996]
gi|390654242|gb|EIN32295.1| protein-P-II uridylyltransferase [Escherichia coli FDA517]
gi|390654536|gb|EIN32582.1| protein-P-II uridylyltransferase [Escherichia coli FDA505]
gi|390670999|gb|EIN47487.1| protein-P-II uridylyltransferase [Escherichia coli 93-001]
gi|390674921|gb|EIN51086.1| protein-P-II uridylyltransferase [Escherichia coli FRIK1990]
gi|390676333|gb|EIN52439.1| protein-P-II uridylyltransferase [Escherichia coli FRIK1985]
gi|390690037|gb|EIN64939.1| protein-P-II uridylyltransferase [Escherichia coli PA3]
gi|390693832|gb|EIN68449.1| protein-P-II uridylyltransferase [Escherichia coli PA9]
gi|390694794|gb|EIN69352.1| protein-P-II uridylyltransferase [Escherichia coli PA5]
gi|390709617|gb|EIN82699.1| protein-P-II uridylyltransferase [Escherichia coli PA10]
gi|390712068|gb|EIN85026.1| protein-P-II uridylyltransferase [Escherichia coli PA15]
gi|390715192|gb|EIN88059.1| protein-P-II uridylyltransferase [Escherichia coli PA14]
gi|390716663|gb|EIN89458.1| protein-P-II uridylyltransferase [Escherichia coli PA25]
gi|390721591|gb|EIN94285.1| protein-P-II uridylyltransferase [Escherichia coli PA22]
gi|390734882|gb|EIO06311.1| protein-P-II uridylyltransferase [Escherichia coli PA24]
gi|390738332|gb|EIO09550.1| protein-P-II uridylyltransferase [Escherichia coli PA28]
gi|390753226|gb|EIO22949.1| protein-P-II uridylyltransferase [Escherichia coli PA31]
gi|390753625|gb|EIO23302.1| protein-P-II uridylyltransferase [Escherichia coli PA32]
gi|390758169|gb|EIO27637.1| protein-P-II uridylyltransferase [Escherichia coli PA33]
gi|390763427|gb|EIO32676.1| protein-P-II uridylyltransferase [Escherichia coli PA40]
gi|390777307|gb|EIO45151.1| protein-P-II uridylyltransferase [Escherichia coli PA41]
gi|390778256|gb|EIO46014.1| protein-P-II uridylyltransferase [Escherichia coli TW06591]
gi|390781190|gb|EIO48874.1| protein-P-II uridylyltransferase [Escherichia coli PA42]
gi|390788086|gb|EIO55556.1| protein-P-II uridylyltransferase [Escherichia coli PA39]
gi|390796282|gb|EIO63558.1| protein-P-II uridylyltransferase [Escherichia coli TW10246]
gi|390802914|gb|EIO69943.1| protein-P-II uridylyltransferase [Escherichia coli TW11039]
gi|390812279|gb|EIO78962.1| protein-P-II uridylyltransferase [Escherichia coli TW07945]
gi|390812708|gb|EIO79384.1| protein-P-II uridylyltransferase [Escherichia coli TW09109]
gi|390820239|gb|EIO86545.1| protein-P-II uridylyltransferase [Escherichia coli TW10119]
gi|390824961|gb|EIO90910.1| protein-P-II uridylyltransferase [Escherichia coli TW09098]
gi|390838045|gb|EIP02363.1| protein-P-II uridylyltransferase [Escherichia coli EC4203]
gi|390841069|gb|EIP05040.1| protein-P-II uridylyltransferase [Escherichia coli EC4196]
gi|390845173|gb|EIP08851.1| protein-P-II uridylyltransferase [Escherichia coli TW09195]
gi|390856528|gb|EIP19108.1| protein-P-II uridylyltransferase [Escherichia coli TW14301]
gi|390861560|gb|EIP23808.1| protein-P-II uridylyltransferase [Escherichia coli EC4421]
gi|390862622|gb|EIP24797.1| protein-P-II uridylyltransferase [Escherichia coli TW14313]
gi|390872591|gb|EIP33880.1| protein-P-II uridylyltransferase [Escherichia coli EC4422]
gi|390877801|gb|EIP38696.1| protein-P-II uridylyltransferase [Escherichia coli EC4013]
gi|390887310|gb|EIP47294.1| protein-P-II uridylyltransferase [Escherichia coli EC4402]
gi|390888990|gb|EIP48772.1| protein-P-II uridylyltransferase [Escherichia coli EC4439]
gi|390896384|gb|EIP55774.1| protein-P-II uridylyltransferase [Escherichia coli EC4436]
gi|390904305|gb|EIP63301.1| protein-P-II uridylyltransferase [Escherichia coli EC1738]
gi|390912550|gb|EIP71202.1| protein-P-II uridylyltransferase [Escherichia coli EC4437]
gi|390912650|gb|EIP71296.1| protein-P-II uridylyltransferase [Escherichia coli EC1734]
gi|390914290|gb|EIP72834.1| protein-P-II uridylyltransferase [Escherichia coli EC1863]
gi|390917730|gb|EIP76147.1| protein-P-II uridylyltransferase [Escherichia coli EC4448]
gi|390926737|gb|EIP84296.1| protein-P-II uridylyltransferase [Escherichia coli EC1845]
gi|408073657|gb|EKH07966.1| protein-P-II uridylyltransferase [Escherichia coli PA7]
gi|408077392|gb|EKH11600.1| protein-P-II uridylyltransferase [Escherichia coli FRIK920]
gi|408087405|gb|EKH20854.1| protein-P-II uridylyltransferase [Escherichia coli PA34]
gi|408092009|gb|EKH25208.1| protein-P-II uridylyltransferase [Escherichia coli FDA506]
gi|408097749|gb|EKH30632.1| protein-P-II uridylyltransferase [Escherichia coli FDA507]
gi|408103931|gb|EKH36260.1| protein-P-II uridylyltransferase [Escherichia coli FDA504]
gi|408111360|gb|EKH43111.1| protein-P-II uridylyltransferase [Escherichia coli FRIK1999]
gi|408117467|gb|EKH48652.1| protein-P-II uridylyltransferase [Escherichia coli FRIK1997]
gi|408123163|gb|EKH53965.1| protein-P-II uridylyltransferase [Escherichia coli NE1487]
gi|408131280|gb|EKH61322.1| protein-P-II uridylyltransferase [Escherichia coli NE037]
gi|408133082|gb|EKH62999.1| protein-P-II uridylyltransferase [Escherichia coli FRIK2001]
gi|408142179|gb|EKH71560.1| protein-P-II uridylyltransferase [Escherichia coli PA4]
gi|408151000|gb|EKH79518.1| protein-P-II uridylyltransferase [Escherichia coli PA23]
gi|408154563|gb|EKH82894.1| protein-P-II uridylyltransferase [Escherichia coli PA49]
gi|408159791|gb|EKH87843.1| protein-P-II uridylyltransferase [Escherichia coli PA45]
gi|408168055|gb|EKH95508.1| protein-P-II uridylyltransferase [Escherichia coli TT12B]
gi|408173843|gb|EKI00846.1| protein-P-II uridylyltransferase [Escherichia coli MA6]
gi|408175504|gb|EKI02406.1| protein-P-II uridylyltransferase [Escherichia coli 5905]
gi|408188031|gb|EKI13920.1| protein-P-II uridylyltransferase [Escherichia coli CB7326]
gi|408193763|gb|EKI19281.1| protein-P-II uridylyltransferase [Escherichia coli 5412]
gi|408194083|gb|EKI19583.1| protein-P-II uridylyltransferase [Escherichia coli EC96038]
gi|408234524|gb|EKI57537.1| protein-P-II uridylyltransferase [Escherichia coli PA38]
gi|408240846|gb|EKI63497.1| protein-P-II uridylyltransferase [Escherichia coli EC1735]
gi|408250307|gb|EKI72167.1| protein-P-II uridylyltransferase [Escherichia coli EC1736]
gi|408254650|gb|EKI76153.1| protein-P-II uridylyltransferase [Escherichia coli EC1737]
gi|408260953|gb|EKI82002.1| protein-P-II uridylyltransferase [Escherichia coli EC1846]
gi|408269563|gb|EKI89808.1| protein-P-II uridylyltransferase [Escherichia coli EC1847]
gi|408271476|gb|EKI91603.1| protein-P-II uridylyltransferase [Escherichia coli EC1848]
gi|408280437|gb|EKI99989.1| protein-P-II uridylyltransferase [Escherichia coli EC1849]
gi|408286292|gb|EKJ05220.1| protein-P-II uridylyltransferase [Escherichia coli EC1850]
gi|408289580|gb|EKJ08338.1| protein-P-II uridylyltransferase [Escherichia coli EC1856]
gi|408301855|gb|EKJ19416.1| protein-P-II uridylyltransferase [Escherichia coli EC1862]
gi|408302059|gb|EKJ19608.1| protein-P-II uridylyltransferase [Escherichia coli EC1864]
gi|408303283|gb|EKJ20749.1| protein-P-II uridylyltransferase [Escherichia coli EC1866]
gi|408319622|gb|EKJ35744.1| protein-P-II uridylyltransferase [Escherichia coli EC1868]
gi|408320284|gb|EKJ36387.1| protein-P-II uridylyltransferase [Escherichia coli EC1870]
gi|408332525|gb|EKJ47560.1| protein-P-II uridylyltransferase [Escherichia coli EC1869]
gi|408338451|gb|EKJ53099.1| protein-P-II uridylyltransferase [Escherichia coli NE098]
gi|408351201|gb|EKJ64992.1| protein-P-II uridylyltransferase [Escherichia coli FRIK523]
gi|408353692|gb|EKJ67187.1| protein-P-II uridylyltransferase [Escherichia coli 0.1304]
gi|408560616|gb|EKK36879.1| protein-P-II uridylyltransferase [Escherichia coli 5.2239]
gi|408560969|gb|EKK37217.1| protein-P-II uridylyltransferase [Escherichia coli 3.4870]
gi|408561585|gb|EKK37788.1| protein-P-II uridylyltransferase [Escherichia coli 6.0172]
gi|408586234|gb|EKK61017.1| protein-P-II uridylyltransferase [Escherichia coli 8.0586]
gi|408592166|gb|EKK66559.1| protein-P-II uridylyltransferase [Escherichia coli 8.2524]
gi|408593917|gb|EKK68225.1| protein-P-II uridylyltransferase [Escherichia coli 10.0833]
gi|408605669|gb|EKK79163.1| protein-P-II uridylyltransferase [Escherichia coli 10.0869]
gi|408606378|gb|EKK79825.1| protein-P-II uridylyltransferase [Escherichia coli 8.0416]
gi|408613536|gb|EKK86824.1| protein-P-II uridylyltransferase [Escherichia coli 88.0221]
gi|408618379|gb|EKK91466.1| protein-P-II uridylyltransferase [Escherichia coli 10.0821]
gi|427215872|gb|EKV85038.1| protein-P-II uridylyltransferase [Escherichia coli 88.1042]
gi|427219314|gb|EKV88283.1| protein-P-II uridylyltransferase [Escherichia coli 89.0511]
gi|427219563|gb|EKV88525.1| protein-P-II uridylyltransferase [Escherichia coli 88.1467]
gi|427235292|gb|EKW02914.1| protein-P-II uridylyltransferase [Escherichia coli 90.0039]
gi|427235357|gb|EKW02978.1| protein-P-II uridylyltransferase [Escherichia coli 90.2281]
gi|427238019|gb|EKW05541.1| protein-P-II uridylyltransferase [Escherichia coli 90.0091]
gi|427252399|gb|EKW18888.1| protein-P-II uridylyltransferase [Escherichia coli 93.0056]
gi|427254222|gb|EKW20590.1| protein-P-II uridylyltransferase [Escherichia coli 93.0055]
gi|427255280|gb|EKW21551.1| protein-P-II uridylyltransferase [Escherichia coli 94.0618]
gi|427271746|gb|EKW36537.1| protein-P-II uridylyltransferase [Escherichia coli 95.0943]
gi|427272295|gb|EKW37048.1| protein-P-II uridylyltransferase [Escherichia coli 95.0183]
gi|427278543|gb|EKW43000.1| protein-P-II uridylyltransferase [Escherichia coli 95.1288]
gi|427287297|gb|EKW51065.1| protein-P-II uridylyltransferase [Escherichia coli 96.0428]
gi|427293426|gb|EKW56680.1| protein-P-II uridylyltransferase [Escherichia coli 96.0427]
gi|427295005|gb|EKW58159.1| protein-P-II uridylyltransferase [Escherichia coli 96.0939]
gi|427305704|gb|EKW68298.1| protein-P-II uridylyltransferase [Escherichia coli 97.0003]
gi|427307887|gb|EKW70311.1| protein-P-II uridylyltransferase [Escherichia coli 96.0932]
gi|427312425|gb|EKW74581.1| protein-P-II uridylyltransferase [Escherichia coli 96.0107]
gi|427322870|gb|EKW84491.1| protein-P-II uridylyltransferase [Escherichia coli 97.1742]
gi|427323590|gb|EKW85151.1| protein-P-II uridylyltransferase [Escherichia coli 97.0007]
gi|427335512|gb|EKW96542.1| protein-P-II uridylyltransferase [Escherichia coli 99.0713]
gi|427335913|gb|EKW96942.1| protein-P-II uridylyltransferase [Escherichia coli 99.0678]
gi|429260852|gb|EKY44383.1| protein-P-II uridylyltransferase [Escherichia coli 96.0109]
gi|429262277|gb|EKY45620.1| protein-P-II uridylyltransferase [Escherichia coli 97.0010]
gi|444543492|gb|ELV22754.1| protein-P-II uridylyltransferase [Escherichia coli 99.0814]
gi|444552195|gb|ELV30038.1| protein-P-II uridylyltransferase [Escherichia coli 09BKT078844]
gi|444552585|gb|ELV30372.1| protein-P-II uridylyltransferase [Escherichia coli 99.0815]
gi|444566164|gb|ELV43000.1| protein-P-II uridylyltransferase [Escherichia coli 99.0839]
gi|444568464|gb|ELV45139.1| protein-P-II uridylyltransferase [Escherichia coli 99.0816]
gi|444573014|gb|ELV49415.1| protein-P-II uridylyltransferase [Escherichia coli 99.0848]
gi|444583654|gb|ELV59350.1| protein-P-II uridylyltransferase [Escherichia coli 99.1753]
gi|444586558|gb|ELV62056.1| protein-P-II uridylyltransferase [Escherichia coli 99.1775]
gi|444587278|gb|ELV62748.1| protein-P-II uridylyltransferase [Escherichia coli 99.1793]
gi|444610051|gb|ELV84487.1| protein-P-II uridylyltransferase [Escherichia coli 99.1805]
gi|444616172|gb|ELV90342.1| protein-P-II uridylyltransferase [Escherichia coli PA13]
gi|444616580|gb|ELV90742.1| protein-P-II uridylyltransferase [Escherichia coli PA19]
gi|444625216|gb|ELV99087.1| protein-P-II uridylyltransferase [Escherichia coli PA2]
gi|444633759|gb|ELW07262.1| protein-P-II uridylyltransferase [Escherichia coli PA48]
gi|444634084|gb|ELW07575.1| protein-P-II uridylyltransferase [Escherichia coli PA47]
gi|444639386|gb|ELW12705.1| protein-P-II uridylyltransferase [Escherichia coli PA8]
gi|444649181|gb|ELW22087.1| protein-P-II uridylyltransferase [Escherichia coli 7.1982]
gi|444651343|gb|ELW24152.1| protein-P-II uridylyltransferase [Escherichia coli 99.1781]
gi|444655369|gb|ELW27988.1| protein-P-II uridylyltransferase [Escherichia coli 99.1762]
gi|444664547|gb|ELW36735.1| protein-P-II uridylyltransferase [Escherichia coli PA35]
gi|444668830|gb|ELW40830.1| protein-P-II uridylyltransferase [Escherichia coli 3.4880]
gi|444673729|gb|ELW45355.1| protein-P-II uridylyltransferase [Escherichia coli 95.0083]
gi|444675171|gb|ELW46652.1| protein-P-II uridylyltransferase [Escherichia coli 99.0670]
Length = 890
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|422333327|ref|ZP_16414338.1| [protein-PII] uridylyltransferase [Escherichia coli 4_1_47FAA]
gi|373245842|gb|EHP65307.1| [protein-PII] uridylyltransferase [Escherichia coli 4_1_47FAA]
Length = 890
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|422830331|ref|ZP_16878490.1| uridylyltransferase [Escherichia coli B093]
gi|371605323|gb|EHN93940.1| uridylyltransferase [Escherichia coli B093]
Length = 890
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|442590844|ref|ZP_21009599.1| [Protein-PII] uridylyltransferase [Escherichia coli O10:K5(L):H4
str. ATCC 23506]
gi|441608848|emb|CCP95512.1| [Protein-PII] uridylyltransferase [Escherichia coli O10:K5(L):H4
str. ATCC 23506]
Length = 890
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGNPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|432858470|ref|ZP_20084966.1| [protein-PII] uridylyltransferase [Escherichia coli KTE146]
gi|431408713|gb|ELG91896.1| [protein-PII] uridylyltransferase [Escherichia coli KTE146]
Length = 890
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|422768421|ref|ZP_16822146.1| protein-P-II uridylyltransferase [Escherichia coli E1520]
gi|323935006|gb|EGB31379.1| protein-P-II uridylyltransferase [Escherichia coli E1520]
Length = 890
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|194693448|gb|ACF80808.1| unknown [Zea mays]
Length = 178
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 85/184 (46%), Gaps = 17/184 (9%)
Query: 19 IDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDVFNVIDC 76
+DN+ + T+I++ + G+L +++ + D N+ + + Y S +G +D+F V
Sbjct: 1 MDNSLSSVHTLIQIQCGDHKGLLYDIMRTVKDGNIQVSYGRFYASQNGRCEIDLFAV-QS 59
Query: 77 DGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFSEV 133
DGKKI D+ + RL + P + V P E +E +G RP +F ++
Sbjct: 60 DGKKILDQHRQRALCCRLRMEL-LRPLRVALVNRGPDTELLVANPVEVSGKGRPLVFYDI 118
Query: 134 CAVLADLHCNVVNAEIWTH--NDRAAAVVHV---TDHSTGYAIKDPKRLSTIKELLFNVL 188
L +L + AEI H DR V + +H A++ S I + + N+L
Sbjct: 119 TLALKNLQKRIFLAEIGRHVVEDREWEVYRLHFGEEHELSSALR-----SKIVDEVTNML 173
Query: 189 RGYD 192
G+D
Sbjct: 174 MGWD 177
>gi|444983645|ref|ZP_21300521.1| protein-P-II uridylyltransferase [Escherichia coli PA11]
gi|444601441|gb|ELV76248.1| protein-P-II uridylyltransferase [Escherichia coli PA11]
Length = 890
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|24111602|ref|NP_706112.1| PII uridylyl-transferase [Shigella flexneri 2a str. 301]
gi|30061724|ref|NP_835895.1| PII uridylyl-transferase [Shigella flexneri 2a str. 2457T]
gi|384541737|ref|YP_005725798.1| uridylyltransferase [Shigella flexneri 2002017]
gi|415859696|ref|ZP_11533895.1| protein-P-II uridylyltransferase [Shigella flexneri 2a str. 2457T]
gi|417699829|ref|ZP_12348977.1| protein-P-II uridylyltransferase [Shigella flexneri K-218]
gi|417705659|ref|ZP_12354734.1| protein-P-II uridylyltransferase [Shigella flexneri VA-6]
gi|417721147|ref|ZP_12370001.1| protein-P-II uridylyltransferase [Shigella flexneri K-304]
gi|417726512|ref|ZP_12375262.1| protein-P-II uridylyltransferase [Shigella flexneri K-671]
gi|417731647|ref|ZP_12380321.1| protein-P-II uridylyltransferase [Shigella flexneri 2747-71]
gi|417737000|ref|ZP_12385613.1| protein-P-II uridylyltransferase [Shigella flexneri 4343-70]
gi|417741650|ref|ZP_12390206.1| protein-P-II uridylyltransferase [Shigella flexneri 2930-71]
gi|417826180|ref|ZP_12472762.1| protein-P-II uridylyltransferase [Shigella flexneri J1713]
gi|420318640|ref|ZP_14820500.1| protein-P-II uridylyltransferase [Shigella flexneri 2850-71]
gi|420329325|ref|ZP_14831042.1| protein-P-II uridylyltransferase [Shigella flexneri K-1770]
gi|420339634|ref|ZP_14841171.1| protein-P-II uridylyltransferase [Shigella flexneri K-404]
gi|52000967|sp|Q83MD4.1|GLND_SHIFL RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|24050368|gb|AAN41819.1| PII-uridylyltransferase [Shigella flexneri 2a str. 301]
gi|30039966|gb|AAP15700.1| PII-uridylyltransferase [Shigella flexneri 2a str. 2457T]
gi|281599521|gb|ADA72505.1| uridylyltransferase [Shigella flexneri 2002017]
gi|313646774|gb|EFS11233.1| protein-P-II uridylyltransferase [Shigella flexneri 2a str. 2457T]
gi|332762039|gb|EGJ92310.1| protein-P-II uridylyltransferase [Shigella flexneri 2747-71]
gi|332762169|gb|EGJ92438.1| protein-P-II uridylyltransferase [Shigella flexneri 4343-70]
gi|332765013|gb|EGJ95241.1| protein-P-II uridylyltransferase [Shigella flexneri K-671]
gi|332768668|gb|EGJ98848.1| protein-P-II uridylyltransferase [Shigella flexneri 2930-71]
gi|333009087|gb|EGK28543.1| protein-P-II uridylyltransferase [Shigella flexneri K-218]
gi|333010660|gb|EGK30093.1| protein-P-II uridylyltransferase [Shigella flexneri VA-6]
gi|333022204|gb|EGK41443.1| protein-P-II uridylyltransferase [Shigella flexneri K-304]
gi|335578367|gb|EGM63585.1| protein-P-II uridylyltransferase [Shigella flexneri J1713]
gi|391255483|gb|EIQ14631.1| protein-P-II uridylyltransferase [Shigella flexneri 2850-71]
gi|391260951|gb|EIQ20001.1| protein-P-II uridylyltransferase [Shigella flexneri K-1770]
gi|391275177|gb|EIQ33970.1| protein-P-II uridylyltransferase [Shigella flexneri K-404]
Length = 890
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|188492984|ref|ZP_03000254.1| protein-P-II uridylyltransferase [Escherichia coli 53638]
gi|404373478|ref|ZP_10978741.1| [protein-PII] uridylyltransferase [Escherichia sp. 1_1_43]
gi|432368158|ref|ZP_19611266.1| [protein-PII] uridylyltransferase [Escherichia coli KTE10]
gi|432483808|ref|ZP_19725737.1| [protein-PII] uridylyltransferase [Escherichia coli KTE212]
gi|432668988|ref|ZP_19904543.1| [protein-PII] uridylyltransferase [Escherichia coli KTE119]
gi|432879422|ref|ZP_20096449.1| [protein-PII] uridylyltransferase [Escherichia coli KTE154]
gi|433171932|ref|ZP_20356502.1| [protein-PII] uridylyltransferase [Escherichia coli KTE232]
gi|188488183|gb|EDU63286.1| protein-P-II uridylyltransferase [Escherichia coli 53638]
gi|226840692|gb|EEH72694.1| [protein-PII] uridylyltransferase [Escherichia sp. 1_1_43]
gi|430889819|gb|ELC12479.1| [protein-PII] uridylyltransferase [Escherichia coli KTE10]
gi|431020033|gb|ELD33424.1| [protein-PII] uridylyltransferase [Escherichia coli KTE212]
gi|431214693|gb|ELF12447.1| [protein-PII] uridylyltransferase [Escherichia coli KTE119]
gi|431415220|gb|ELG97770.1| [protein-PII] uridylyltransferase [Escherichia coli KTE154]
gi|431697236|gb|ELJ62381.1| [protein-PII] uridylyltransferase [Escherichia coli KTE232]
Length = 890
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|419937859|ref|ZP_14454705.1| PII uridylyl-transferase [Escherichia coli 75]
gi|388411398|gb|EIL71579.1| PII uridylyl-transferase [Escherichia coli 75]
Length = 890
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGNPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|432684046|ref|ZP_19919369.1| [protein-PII] uridylyltransferase [Escherichia coli KTE156]
gi|431225964|gb|ELF23150.1| [protein-PII] uridylyltransferase [Escherichia coli KTE156]
Length = 890
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGNPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|74310787|ref|YP_309206.1| PII uridylyl-transferase [Shigella sonnei Ss046]
gi|383176774|ref|YP_005454779.1| PII uridylyl-transferase [Shigella sonnei 53G]
gi|414574356|ref|ZP_11431571.1| protein-P-II uridylyltransferase [Shigella sonnei 3233-85]
gi|415849980|ref|ZP_11527012.1| protein-P-II uridylyltransferase [Shigella sonnei 53G]
gi|418261635|ref|ZP_12883590.1| protein-P-II uridylyltransferase [Shigella sonnei str. Moseley]
gi|420356739|ref|ZP_14857764.1| protein-P-II uridylyltransferase [Shigella sonnei 3226-85]
gi|420361706|ref|ZP_14862638.1| protein-P-II uridylyltransferase [Shigella sonnei 4822-66]
gi|91206757|sp|Q3Z5J1.1|GLND_SHISS RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|73854264|gb|AAZ86971.1| protein PII [Shigella sonnei Ss046]
gi|323165867|gb|EFZ51649.1| protein-P-II uridylyltransferase [Shigella sonnei 53G]
gi|391290049|gb|EIQ48525.1| protein-P-II uridylyltransferase [Shigella sonnei 3226-85]
gi|391290241|gb|EIQ48716.1| protein-P-II uridylyltransferase [Shigella sonnei 3233-85]
gi|391297289|gb|EIQ55343.1| protein-P-II uridylyltransferase [Shigella sonnei 4822-66]
gi|397903467|gb|EJL19764.1| protein-P-II uridylyltransferase [Shigella sonnei str. Moseley]
Length = 890
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|26246113|ref|NP_752152.1| PII uridylyl-transferase [Escherichia coli CFT073]
gi|227884920|ref|ZP_04002725.1| PII uridylyl-transferase [Escherichia coli 83972]
gi|301049922|ref|ZP_07196845.1| protein-P-II uridylyltransferase [Escherichia coli MS 185-1]
gi|386627688|ref|YP_006147408.1| PII uridylyl-transferase [Escherichia coli str. 'clone D i2']
gi|386632608|ref|YP_006152327.1| PII uridylyl-transferase [Escherichia coli str. 'clone D i14']
gi|386637525|ref|YP_006104323.1| [protein-PII] uridylyltransferase [Escherichia coli ABU 83972]
gi|432410168|ref|ZP_19652855.1| [protein-PII] uridylyltransferase [Escherichia coli KTE39]
gi|432434715|ref|ZP_19677126.1| [protein-PII] uridylyltransferase [Escherichia coli KTE188]
gi|432493994|ref|ZP_19735816.1| [protein-PII] uridylyltransferase [Escherichia coli KTE214]
gi|432510399|ref|ZP_19749259.1| [protein-PII] uridylyltransferase [Escherichia coli KTE220]
gi|432522308|ref|ZP_19759453.1| [protein-PII] uridylyltransferase [Escherichia coli KTE230]
gi|432567039|ref|ZP_19803571.1| [protein-PII] uridylyltransferase [Escherichia coli KTE53]
gi|432591169|ref|ZP_19827502.1| [protein-PII] uridylyltransferase [Escherichia coli KTE60]
gi|432606032|ref|ZP_19842232.1| [protein-PII] uridylyltransferase [Escherichia coli KTE67]
gi|432649536|ref|ZP_19885306.1| [protein-PII] uridylyltransferase [Escherichia coli KTE87]
gi|432782054|ref|ZP_20016241.1| [protein-PII] uridylyltransferase [Escherichia coli KTE63]
gi|432976871|ref|ZP_20165698.1| [protein-PII] uridylyltransferase [Escherichia coli KTE209]
gi|432993923|ref|ZP_20182544.1| [protein-PII] uridylyltransferase [Escherichia coli KTE218]
gi|432998341|ref|ZP_20186891.1| [protein-PII] uridylyltransferase [Escherichia coli KTE223]
gi|433085818|ref|ZP_20272228.1| [protein-PII] uridylyltransferase [Escherichia coli KTE137]
gi|433114103|ref|ZP_20299928.1| [protein-PII] uridylyltransferase [Escherichia coli KTE153]
gi|433123764|ref|ZP_20309363.1| [protein-PII] uridylyltransferase [Escherichia coli KTE160]
gi|433137833|ref|ZP_20323127.1| [protein-PII] uridylyltransferase [Escherichia coli KTE167]
gi|433147585|ref|ZP_20332672.1| [protein-PII] uridylyltransferase [Escherichia coli KTE174]
gi|433211085|ref|ZP_20394709.1| [protein-PII] uridylyltransferase [Escherichia coli KTE99]
gi|442607303|ref|ZP_21022080.1| [Protein-PII] uridylyltransferase [Escherichia coli Nissle 1917]
gi|30173020|sp|Q8CY19.1|GLND_ECOL6 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|26106510|gb|AAN78696.1|AE016755_196 [Protein-PII] uridylyltransferase [Escherichia coli CFT073]
gi|227838058|gb|EEJ48524.1| PII uridylyl-transferase [Escherichia coli 83972]
gi|300298324|gb|EFJ54709.1| protein-P-II uridylyltransferase [Escherichia coli MS 185-1]
gi|307552017|gb|ADN44792.1| [protein-PII] uridylyltransferase [Escherichia coli ABU 83972]
gi|355418587|gb|AER82784.1| PII uridylyl-transferase [Escherichia coli str. 'clone D i2']
gi|355423507|gb|AER87703.1| PII uridylyl-transferase [Escherichia coli str. 'clone D i14']
gi|430938887|gb|ELC59112.1| [protein-PII] uridylyltransferase [Escherichia coli KTE39]
gi|430968200|gb|ELC85433.1| [protein-PII] uridylyltransferase [Escherichia coli KTE188]
gi|431029768|gb|ELD42799.1| [protein-PII] uridylyltransferase [Escherichia coli KTE214]
gi|431032542|gb|ELD45252.1| [protein-PII] uridylyltransferase [Escherichia coli KTE220]
gi|431055648|gb|ELD65187.1| [protein-PII] uridylyltransferase [Escherichia coli KTE230]
gi|431103618|gb|ELE08261.1| [protein-PII] uridylyltransferase [Escherichia coli KTE53]
gi|431133730|gb|ELE35697.1| [protein-PII] uridylyltransferase [Escherichia coli KTE60]
gi|431142300|gb|ELE44050.1| [protein-PII] uridylyltransferase [Escherichia coli KTE67]
gi|431194822|gb|ELE94037.1| [protein-PII] uridylyltransferase [Escherichia coli KTE87]
gi|431332947|gb|ELG20168.1| [protein-PII] uridylyltransferase [Escherichia coli KTE63]
gi|431483829|gb|ELH63518.1| [protein-PII] uridylyltransferase [Escherichia coli KTE209]
gi|431511661|gb|ELH89792.1| [protein-PII] uridylyltransferase [Escherichia coli KTE218]
gi|431516152|gb|ELH93766.1| [protein-PII] uridylyltransferase [Escherichia coli KTE223]
gi|431610721|gb|ELI80006.1| [protein-PII] uridylyltransferase [Escherichia coli KTE137]
gi|431637630|gb|ELJ05685.1| [protein-PII] uridylyltransferase [Escherichia coli KTE153]
gi|431650976|gb|ELJ18283.1| [protein-PII] uridylyltransferase [Escherichia coli KTE160]
gi|431665866|gb|ELJ32575.1| [protein-PII] uridylyltransferase [Escherichia coli KTE167]
gi|431679248|gb|ELJ45161.1| [protein-PII] uridylyltransferase [Escherichia coli KTE174]
gi|431736508|gb|ELJ99833.1| [protein-PII] uridylyltransferase [Escherichia coli KTE99]
gi|441711443|emb|CCQ08057.1| [Protein-PII] uridylyltransferase [Escherichia coli Nissle 1917]
Length = 890
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LGKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|301028658|ref|ZP_07191881.1| protein-P-II uridylyltransferase [Escherichia coli MS 196-1]
gi|423700948|ref|ZP_17675407.1| [protein-PII] uridylyltransferase [Escherichia coli H730]
gi|433046216|ref|ZP_20233660.1| [protein-PII] uridylyltransferase [Escherichia coli KTE120]
gi|299878327|gb|EFI86538.1| protein-P-II uridylyltransferase [Escherichia coli MS 196-1]
gi|385713648|gb|EIG50579.1| [protein-PII] uridylyltransferase [Escherichia coli H730]
gi|431574060|gb|ELI46845.1| [protein-PII] uridylyltransferase [Escherichia coli KTE120]
Length = 890
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGNPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|452853079|ref|YP_007494763.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio piezophilus]
gi|451896733|emb|CCH49612.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio piezophilus]
Length = 867
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 9 IRRMNP---PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
++R P P V IDN+ TVI+V + ++ G L + + L +++L I A I++ G
Sbjct: 771 MKRPGPRLRPIVTIDNSASDFYTVIEVAATDRTGFLFDMARTLANLSLSIHLAKITTIKG 830
Query: 66 WFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
D+F++ D +G K+ D + + + L
Sbjct: 831 RAADIFHIRDTEGGKLTDSARLQAVHEAL 859
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 79/186 (42%), Gaps = 27/186 (14%)
Query: 25 ADAT-VIKVDSVNKHGILLQVIQVL--NDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKI 81
AD T + + +++ G+ + L + +N++ + DG +DVF V +
Sbjct: 677 ADGTYTLTIAALDSPGLFATIAGALALHGLNILAADIFTWKDGT-AVDVFTVGEPPENLF 735
Query: 82 ------RDKEVIDY-------IQQRLE-------TDASFAPSLRSSVGV--MPTEEHTSI 119
R K I Y I+ RLE T P LR V + ++ +T I
Sbjct: 736 PHEVWARVKRSIGYARVGKLDIESRLEDRRNSPLTMKRPGPRLRPIVTIDNSASDFYTVI 795
Query: 120 EFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLST 179
E TDR G ++ LA+L ++ A+I T RAA + H+ D + G + D RL
Sbjct: 796 EVAATDRTGFLFDMARTLANLSLSIHLAKITTIKGRAADIFHIRD-TEGGKLTDSARLQA 854
Query: 180 IKELLF 185
+ E L
Sbjct: 855 VHEALL 860
>gi|433090513|ref|ZP_20276826.1| [protein-PII] uridylyltransferase [Escherichia coli KTE138]
gi|431616286|gb|ELI85353.1| [protein-PII] uridylyltransferase [Escherichia coli KTE138]
Length = 890
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQAMRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|432600676|ref|ZP_19836932.1| [protein-PII] uridylyltransferase [Escherichia coli KTE66]
gi|431144715|gb|ELE46409.1| [protein-PII] uridylyltransferase [Escherichia coli KTE66]
Length = 890
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|425303678|ref|ZP_18693493.1| protein-P-II uridylyltransferase [Escherichia coli N1]
gi|408232729|gb|EKI55897.1| protein-P-II uridylyltransferase [Escherichia coli N1]
Length = 890
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGNPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|395500382|ref|ZP_10431961.1| PII uridylyl-transferase [Pseudomonas sp. PAMC 25886]
Length = 900
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 88/201 (43%), Gaps = 31/201 (15%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRDK-EVIDYIQQRLETDA----------------------SFAPSLRSS 107
+ V+D +G+ I D E + I++ L TDA +FAP + +
Sbjct: 749 YIVLDTEGESIGDNPERVKKIRKGL-TDALRNPDDYPTIIQRRVPRQLKHFAFAPEV--T 805
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+ T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 806 IHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-AD 864
Query: 168 GYAIKDPKRLSTIKELLFNVL 188
+ DP+ ++E + L
Sbjct: 865 NQPLSDPELCRRLQEAIVQQL 885
Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPEVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF + D D + + D E+ +Q+
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSDPELCRRLQE 879
>gi|218688042|ref|YP_002396254.1| PII uridylyl-transferase [Escherichia coli ED1a]
gi|254798833|sp|B7MP27.1|GLND_ECO81 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|218425606|emb|CAR06392.1| uridylyltransferase [Escherichia coli ED1a]
Length = 890
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LGKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|226945943|ref|YP_002801016.1| PII uridylyl-transferase [Azotobacter vinelandii DJ]
gi|548353|sp|P36223.1|GLND_AZOVI RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|259492000|sp|C1DSU8.1|GLND_AZOVD RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|39257|emb|CAA42173.1| uridylyl transferase [Azotobacter vinelandii]
gi|226720870|gb|ACO80041.1| protein-P-II uridylyltransferase [Azotobacter vinelandii DJ]
Length = 899
Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 31/188 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + AT I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGATQIFIYAPDQHDFFAVTVAAMDQLNLSIHDARVITSTSQFTLDT 748
Query: 71 FNVIDCDGKKI-----RDKEV-----------IDY---IQQRLETDA---SFAPSLR-SS 107
+ V+D DG I R +E+ DY IQ+R+ +FAP + +
Sbjct: 749 YIVLDADGGSIGNNPARIQEIRQGLVEALRNPADYPTIIQRRVPRQLKHFAFAPQVTIQN 808
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+ P T +E DRPGL + + + D ++ NA+I T +R V VTD +
Sbjct: 809 DALRPV---TILEIIAPDRPGLLARIGKIFLDFDLSLQNAKIATLGERVEDVFFVTD-AH 864
Query: 168 GYAIKDPK 175
+ DP+
Sbjct: 865 NQPLSDPE 872
Score = 41.6 bits (96), Expect = 0.33, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 56/114 (49%), Gaps = 14/114 (12%)
Query: 4 EYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLV 54
+Y +I+R P P+V I N+ T++++ + ++ G+L ++ ++ D +L
Sbjct: 782 DYPTIIQRRVPRQLKHFAFAPQVTIQNDALRPVTILEIIAPDRPGLLARIGKIFLDFDLS 841
Query: 55 IKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ-----QRLETDASFAPS 103
++ A I++ G DVF V D + + D E+ +Q Q + D+ PS
Sbjct: 842 LQNAKIATLGERVEDVFFVTDAHNQPLSDPELCARLQLAIAEQLADGDSYIQPS 895
>gi|418252904|ref|ZP_12878326.1| protein-P-II uridylyltransferase [Shigella flexneri 6603-63]
gi|397901971|gb|EJL18307.1| protein-P-II uridylyltransferase [Shigella flexneri 6603-63]
Length = 890
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|419140131|ref|ZP_13684915.1| protein-P-II uridylyltransferase [Escherichia coli DEC5E]
gi|377978929|gb|EHV42208.1| protein-P-II uridylyltransferase [Escherichia coli DEC5E]
Length = 890
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|154254033|ref|YP_001414857.1| PII uridylyl-transferase [Parvibaculum lavamentivorans DS-1]
gi|154157983|gb|ABS65200.1| metal dependent phosphohydrolase [Parvibaculum lavamentivorans
DS-1]
Length = 931
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V IDN+ D TVI+V+ +++ G++ + + L + L I A+I++ G +DVF V
Sbjct: 826 PQVFIDNDASDDYTVIEVNGLDRPGLVHALSRALFHLGLTIGSAHITTYGERAVDVFYVK 885
Query: 75 DCDGKKI 81
D G K+
Sbjct: 886 DVIGHKV 892
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%)
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 171
PT + T + D PGLF+ A L N+V+A+I+T D A + G AI
Sbjct: 723 PTRDVTQLTLYTQDHPGLFARFAGACAALGMNIVDAKIFTTRDGMALDMLWVQDPEGLAI 782
Query: 172 KDPKRLSTIKELLFNVLRG 190
+ +R+ ++E++ VL G
Sbjct: 783 SEQRRIIRLEEMIRKVLSG 801
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 96/223 (43%), Gaps = 29/223 (13%)
Query: 3 DEYAKLIRRMN--PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLN--DVNLVIKKA 58
+ +A+LI+ P ++ + D T + + + + G+ + +N+V K
Sbjct: 701 ERHARLIQGAGEEPLTILAEPEPTRDVTQLTLYTQDHPGLFARFAGACAALGMNIVDAKI 760
Query: 59 YISSDGGWFMDVFNVIDCDGKKIRDKEVI----DYIQQRLETDASFAPSLRSS------- 107
+ + DG +D+ V D +G I ++ I + I++ L + S ++ S
Sbjct: 761 FTTRDG-MALDMLWVQDPEGLAISEQRRIIRLEEMIRKVLSGEISAPDAIESRTRRERRA 819
Query: 108 --VGVMP--------TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAA 157
V P ++++T IE G DRPGL + L L + +A I T+ +RA
Sbjct: 820 EAFSVAPQVFIDNDASDDYTVIEVNGLDRPGLVHALSRALFHLGLTIGSAHITTYGERAV 879
Query: 158 AVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTS 200
V +V D G+ + + + ++ L L D +KA+ +
Sbjct: 880 DVFYVKD-VIGHKVTNANKKKAVERHLLEAL--ADPMKKARPA 919
>gi|146155|gb|AAA23878.1| uridylyl transferase [Escherichia coli]
Length = 890
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGNPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|187731963|ref|YP_001878968.1| PII uridylyl-transferase [Shigella boydii CDC 3083-94]
gi|238689498|sp|B2U309.1|GLND_SHIB3 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|187428955|gb|ACD08229.1| protein-P-II uridylyltransferase [Shigella boydii CDC 3083-94]
Length = 890
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGNPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|415777475|ref|ZP_11488704.1| protein-P-II uridylyltransferase [Escherichia coli 3431]
gi|315616350|gb|EFU96968.1| protein-P-II uridylyltransferase [Escherichia coli 3431]
Length = 890
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGNPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|300993612|ref|ZP_07180468.1| protein-P-II uridylyltransferase [Escherichia coli MS 45-1]
gi|422362645|ref|ZP_16443206.1| protein-P-II uridylyltransferase [Escherichia coli MS 153-1]
gi|432454944|ref|ZP_19697156.1| [protein-PII] uridylyltransferase [Escherichia coli KTE201]
gi|433056492|ref|ZP_20243593.1| [protein-PII] uridylyltransferase [Escherichia coli KTE124]
gi|300406535|gb|EFJ90073.1| protein-P-II uridylyltransferase [Escherichia coli MS 45-1]
gi|315294610|gb|EFU53957.1| protein-P-II uridylyltransferase [Escherichia coli MS 153-1]
gi|430986877|gb|ELD03443.1| [protein-PII] uridylyltransferase [Escherichia coli KTE201]
gi|431575432|gb|ELI48167.1| [protein-PII] uridylyltransferase [Escherichia coli KTE124]
Length = 890
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LGKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|253687335|ref|YP_003016525.1| UTP-GlnB uridylyltransferase, GlnD [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|259492002|sp|C6DAI1.1|GLND_PECCP RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|251753913|gb|ACT11989.1| UTP-GlnB uridylyltransferase, GlnD [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 904
Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats.
Identities = 53/199 (26%), Positives = 93/199 (46%), Gaps = 20/199 (10%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P V+I + T I + S ++ + V L+ NL + A I +S G MD
Sbjct: 703 VNKPLVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 762
Query: 71 FNVIDCDGKKI-RDK-EVIDYIQQRLETDASF--------APSLR-----SSVGVMPT-- 113
F V++ DG + +D+ E+I + ++ T + +P LR + V +PT
Sbjct: 763 FIVLEPDGSPLAQDRHEMIRHALEQALTQRHYQHPRVRRPSPKLRHFSVPTEVNFLPTHT 822
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
+ + +E + D+PGL + + + ADL+ ++ A I T +R + + D S A+K
Sbjct: 823 DRRSYMELSALDQPGLLARIGEIFADLNLSLHGARISTIGERVEDLFILAD-SDRRALKP 881
Query: 174 PKRLSTIKELLFNVLRGYD 192
RL ++E L L D
Sbjct: 882 ELRLK-LQERLTEALNPND 899
>gi|16128160|ref|NP_414709.1| uridylyltransferase [Escherichia coli str. K-12 substr. MG1655]
gi|170079803|ref|YP_001729123.1| PII uridylyl-transferase [Escherichia coli str. K-12 substr. DH10B]
gi|238899565|ref|YP_002925361.1| PII uridylyl-transferase [Escherichia coli BW2952]
gi|300949802|ref|ZP_07163775.1| protein-P-II uridylyltransferase [Escherichia coli MS 116-1]
gi|300956049|ref|ZP_07168375.1| protein-P-II uridylyltransferase [Escherichia coli MS 175-1]
gi|301646488|ref|ZP_07246365.1| protein-P-II uridylyltransferase [Escherichia coli MS 146-1]
gi|331640621|ref|ZP_08341769.1| protein-P-II uridylyltransferase [Escherichia coli H736]
gi|386279211|ref|ZP_10056899.1| [protein-PII] uridylyltransferase [Escherichia sp. 4_1_40B]
gi|386596940|ref|YP_006093340.1| UTP-GlnB uridylyltransferase, GlnD [Escherichia coli DH1]
gi|386612330|ref|YP_006131996.1| PII uridylyltransferase GlnD [Escherichia coli UMNK88]
gi|387610639|ref|YP_006113755.1| [protein-PII] uridylyltransferase [Escherichia coli ETEC H10407]
gi|387619934|ref|YP_006127561.1| PII uridylyl-transferase [Escherichia coli DH1]
gi|388476285|ref|YP_488469.1| uridylyltransferase [Escherichia coli str. K-12 substr. W3110]
gi|417260536|ref|ZP_12048034.1| protein-P-II uridylyltransferase [Escherichia coli 2.3916]
gi|417279585|ref|ZP_12066891.1| protein-P-II uridylyltransferase [Escherichia coli 3.2303]
gi|417293130|ref|ZP_12080410.1| protein-P-II uridylyltransferase [Escherichia coli B41]
gi|417611177|ref|ZP_12261653.1| protein-P-II uridylyltransferase [Escherichia coli STEC_EH250]
gi|417616506|ref|ZP_12266945.1| protein-P-II uridylyltransferase [Escherichia coli G58-1]
gi|417632645|ref|ZP_12282868.1| protein-P-II uridylyltransferase [Escherichia coli STEC_S1191]
gi|417944187|ref|ZP_12587431.1| PII uridylyl-transferase [Escherichia coli XH140A]
gi|417975923|ref|ZP_12616719.1| PII uridylyl-transferase [Escherichia coli XH001]
gi|418301053|ref|ZP_12912847.1| protein-P-II uridylyltransferase [Escherichia coli UMNF18]
gi|418959616|ref|ZP_13511514.1| protein-P-II uridylyltransferase [Escherichia coli J53]
gi|419140536|ref|ZP_13685295.1| protein-P-II uridylyltransferase [Escherichia coli DEC6A]
gi|419146108|ref|ZP_13690806.1| protein-P-II uridylyltransferase [Escherichia coli DEC6B]
gi|419152007|ref|ZP_13696599.1| protein-P-II uridylyltransferase [Escherichia coli DEC6C]
gi|419157423|ref|ZP_13701954.1| protein-P-II uridylyltransferase [Escherichia coli DEC6D]
gi|419162429|ref|ZP_13706910.1| protein-P-II uridylyltransferase [Escherichia coli DEC6E]
gi|419173552|ref|ZP_13717414.1| protein-P-II uridylyltransferase [Escherichia coli DEC7B]
gi|419812929|ref|ZP_14337789.1| PII uridylyl-transferase [Escherichia coli O32:H37 str. P4]
gi|422772911|ref|ZP_16826597.1| protein-P-II uridylyltransferase [Escherichia coli E482]
gi|422792818|ref|ZP_16845517.1| protein-P-II uridylyltransferase [Escherichia coli TA007]
gi|422816182|ref|ZP_16864397.1| [protein-PII] uridylyltransferase [Escherichia coli M919]
gi|425113487|ref|ZP_18515342.1| protein-P-II uridylyltransferase [Escherichia coli 8.0566]
gi|425118238|ref|ZP_18519992.1| protein-P-II uridylyltransferase [Escherichia coli 8.0569]
gi|425270875|ref|ZP_18662400.1| protein-P-II uridylyltransferase [Escherichia coli TW15901]
gi|425281498|ref|ZP_18672629.1| protein-P-II uridylyltransferase [Escherichia coli TW00353]
gi|432415118|ref|ZP_19657753.1| [protein-PII] uridylyltransferase [Escherichia coli KTE44]
gi|432578879|ref|ZP_19815315.1| [protein-PII] uridylyltransferase [Escherichia coli KTE56]
gi|432625725|ref|ZP_19861714.1| [protein-PII] uridylyltransferase [Escherichia coli KTE77]
gi|432635485|ref|ZP_19871375.1| [protein-PII] uridylyltransferase [Escherichia coli KTE81]
gi|432689950|ref|ZP_19925204.1| [protein-PII] uridylyltransferase [Escherichia coli KTE161]
gi|432702709|ref|ZP_19937841.1| [protein-PII] uridylyltransferase [Escherichia coli KTE171]
gi|432735630|ref|ZP_19970422.1| [protein-PII] uridylyltransferase [Escherichia coli KTE42]
gi|432952823|ref|ZP_20145566.1| [protein-PII] uridylyltransferase [Escherichia coli KTE197]
gi|450238435|ref|ZP_21898863.1| PII uridylyl-transferase [Escherichia coli S17]
gi|544396|sp|P27249.2|GLND_ECOLI RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|229487473|sp|B1XD36.1|GLND_ECODH RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|259492001|sp|C4ZRQ9.1|GLND_ECOBW RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|1552744|gb|AAB08596.1| PII uridylyl-transferase [Escherichia coli]
gi|1786363|gb|AAC73278.1| uridylyltransferase [Escherichia coli str. K-12 substr. MG1655]
gi|85674365|dbj|BAE76045.1| uridylyltransferase [Escherichia coli str. K12 substr. W3110]
gi|169887638|gb|ACB01345.1| uridylyltransferase/uridylyl-removing enzyme [Escherichia coli str.
K-12 substr. DH10B]
gi|238863774|gb|ACR65772.1| uridylyltransferase [Escherichia coli BW2952]
gi|260450629|gb|ACX41051.1| UTP-GlnB uridylyltransferase, GlnD [Escherichia coli DH1]
gi|300317113|gb|EFJ66897.1| protein-P-II uridylyltransferase [Escherichia coli MS 175-1]
gi|300450800|gb|EFK14420.1| protein-P-II uridylyltransferase [Escherichia coli MS 116-1]
gi|301075314|gb|EFK90120.1| protein-P-II uridylyltransferase [Escherichia coli MS 146-1]
gi|309700375|emb|CBI99663.1| [protein-PII] uridylyltransferase [Escherichia coli ETEC H10407]
gi|315134857|dbj|BAJ42016.1| PII uridylyl-transferase [Escherichia coli DH1]
gi|323939958|gb|EGB36156.1| protein-P-II uridylyltransferase [Escherichia coli E482]
gi|323970646|gb|EGB65902.1| protein-P-II uridylyltransferase [Escherichia coli TA007]
gi|331040367|gb|EGI12574.1| protein-P-II uridylyltransferase [Escherichia coli H736]
gi|332341499|gb|AEE54833.1| PII uridylyltransferase GlnD [Escherichia coli UMNK88]
gi|339413151|gb|AEJ54823.1| protein-P-II uridylyltransferase [Escherichia coli UMNF18]
gi|342364015|gb|EGU28118.1| PII uridylyl-transferase [Escherichia coli XH140A]
gi|344194321|gb|EGV48395.1| PII uridylyl-transferase [Escherichia coli XH001]
gi|345367151|gb|EGW99238.1| protein-P-II uridylyltransferase [Escherichia coli STEC_EH250]
gi|345383640|gb|EGX13513.1| protein-P-II uridylyltransferase [Escherichia coli G58-1]
gi|345391442|gb|EGX21232.1| protein-P-II uridylyltransferase [Escherichia coli STEC_S1191]
gi|359331025|dbj|BAL37472.1| uridylyltransferase [Escherichia coli str. K-12 substr. MDS42]
gi|378000719|gb|EHV63785.1| protein-P-II uridylyltransferase [Escherichia coli DEC6A]
gi|378002544|gb|EHV65595.1| protein-P-II uridylyltransferase [Escherichia coli DEC6B]
gi|378004131|gb|EHV67160.1| protein-P-II uridylyltransferase [Escherichia coli DEC6C]
gi|378015589|gb|EHV78483.1| protein-P-II uridylyltransferase [Escherichia coli DEC6D]
gi|378017577|gb|EHV80449.1| protein-P-II uridylyltransferase [Escherichia coli DEC6E]
gi|378039043|gb|EHW01548.1| protein-P-II uridylyltransferase [Escherichia coli DEC7B]
gi|384377837|gb|EIE35730.1| protein-P-II uridylyltransferase [Escherichia coli J53]
gi|385154228|gb|EIF16244.1| PII uridylyl-transferase [Escherichia coli O32:H37 str. P4]
gi|385540581|gb|EIF87402.1| [protein-PII] uridylyltransferase [Escherichia coli M919]
gi|386123800|gb|EIG72389.1| [protein-PII] uridylyltransferase [Escherichia sp. 4_1_40B]
gi|386225694|gb|EII48019.1| protein-P-II uridylyltransferase [Escherichia coli 2.3916]
gi|386237684|gb|EII74628.1| protein-P-II uridylyltransferase [Escherichia coli 3.2303]
gi|386252702|gb|EIJ02393.1| protein-P-II uridylyltransferase [Escherichia coli B41]
gi|408200406|gb|EKI25587.1| protein-P-II uridylyltransferase [Escherichia coli TW15901]
gi|408206721|gb|EKI31493.1| protein-P-II uridylyltransferase [Escherichia coli TW00353]
gi|408573865|gb|EKK49671.1| protein-P-II uridylyltransferase [Escherichia coli 8.0566]
gi|408574454|gb|EKK50224.1| protein-P-II uridylyltransferase [Escherichia coli 8.0569]
gi|430944543|gb|ELC64636.1| [protein-PII] uridylyltransferase [Escherichia coli KTE44]
gi|431109835|gb|ELE13785.1| [protein-PII] uridylyltransferase [Escherichia coli KTE56]
gi|431166077|gb|ELE66404.1| [protein-PII] uridylyltransferase [Escherichia coli KTE77]
gi|431174751|gb|ELE74787.1| [protein-PII] uridylyltransferase [Escherichia coli KTE81]
gi|431232623|gb|ELF28289.1| [protein-PII] uridylyltransferase [Escherichia coli KTE161]
gi|431248110|gb|ELF42319.1| [protein-PII] uridylyltransferase [Escherichia coli KTE171]
gi|431287901|gb|ELF78687.1| [protein-PII] uridylyltransferase [Escherichia coli KTE42]
gi|431472548|gb|ELH52436.1| [protein-PII] uridylyltransferase [Escherichia coli KTE197]
gi|449325750|gb|EMD15652.1| PII uridylyl-transferase [Escherichia coli S17]
Length = 890
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGNPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|449533134|ref|XP_004173532.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like, partial [Cucumis sativus]
Length = 224
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 68/138 (49%), Gaps = 20/138 (14%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ DATV+++ ++ G LL + L ++ L + KA + D + F++
Sbjct: 86 PIVIIDQDSDQDATVVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNRFSIT 145
Query: 75 DCD-GKKIRDKEVID---------YIQQRLETDASFAPSLRSSVGVMPTEE--------H 116
D G+K+ D E+++ IQ E+ A A + ++ GV+P ++ H
Sbjct: 146 KADTGRKVDDPELLEAIRLTIINNLIQYHPESSAQLA--MGAAFGVVPPKQQVDVDIATH 203
Query: 117 TSIEFTGTDRPGLFSEVC 134
+++ G DR L+ E
Sbjct: 204 INVQDDGPDRSLLYVETA 221
>gi|432562087|ref|ZP_19798720.1| [protein-PII] uridylyltransferase [Escherichia coli KTE51]
gi|431101050|gb|ELE06019.1| [protein-PII] uridylyltransferase [Escherichia coli KTE51]
Length = 890
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGNPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|399003066|ref|ZP_10705737.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM18]
gi|398123470|gb|EJM13019.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM18]
Length = 900
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 87/200 (43%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVID--------------YIQQRLETDA---SFAPSLRSSV 108
+ V+D DG I D K++ D IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIRDGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 866 QPLSDPLLCSRLQDAIVEQL 885
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DNYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D + + + D + +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSRLQ 878
>gi|395794807|ref|ZP_10474124.1| PII uridylyl-transferase [Pseudomonas sp. Ag1]
gi|395341076|gb|EJF72900.1| PII uridylyl-transferase [Pseudomonas sp. Ag1]
Length = 900
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 88/201 (43%), Gaps = 31/201 (15%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRDK-EVIDYIQQRLETDA----------------------SFAPSLRSS 107
+ V+D +G+ I D E + I++ L TDA +FAP + +
Sbjct: 749 YIVLDTEGESIGDNPERVKKIRKGL-TDALRNPDDYPTIIQRRVPRQLKHFAFAPEV--T 805
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+ T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 806 IHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-AD 864
Query: 168 GYAIKDPKRLSTIKELLFNVL 188
+ DP+ ++E + L
Sbjct: 865 NQPLSDPELCRRLQEAIVQQL 885
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPEVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF + D D + + D E+ +Q+
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSDPELCRRLQE 879
>gi|209695853|ref|YP_002263783.1| PII uridylyl-transferase [Aliivibrio salmonicida LFI1238]
gi|208009806|emb|CAQ80113.1| [protein-PII] uridylyltransferase [Aliivibrio salmonicida LFI1238]
Length = 883
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 85/189 (44%), Gaps = 19/189 (10%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVID 75
++I N T I V S ++ + V L+ ++ I A I SS G+ +D F V+D
Sbjct: 691 ILISKNATRGGTEIFVYSKDQAHLFATVAAELDRRSITIYDAQIMSSKDGYALDTFIVLD 750
Query: 76 CDGKKI---RDKEVIDYIQQ-RLETDASFAPSLR-----------SSVGVMPTE--EHTS 118
+ I R + +ID + LET + + R + + +PT+ + T
Sbjct: 751 QNDDPIDEERQQLLIDQLYAVELETQDTHIRTRRPPRQLQHFTVKTRMEFLPTKTGKRTL 810
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
+EF D PGL + V A A L N+ A+I T +RA + +T TG + D K+
Sbjct: 811 MEFVALDTPGLLATVGATFARLGVNLHAAKITTIGERAEDLFILTS-ETGGRLDDEKQAE 869
Query: 179 TIKELLFNV 187
L+ NV
Sbjct: 870 LKIALIKNV 878
>gi|421143790|ref|ZP_15603722.1| PII uridylyl-transferase [Pseudomonas fluorescens BBc6R8]
gi|404505051|gb|EKA19089.1| PII uridylyl-transferase [Pseudomonas fluorescens BBc6R8]
Length = 900
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 88/201 (43%), Gaps = 31/201 (15%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRDK-EVIDYIQQRLETDA----------------------SFAPSLRSS 107
+ V+D +G+ I D E + I++ L TDA +FAP + +
Sbjct: 749 YIVLDTEGESIGDNPERVKKIRKGL-TDALRNPDDYPTIIQRRVPRQLKHFAFAPEV--T 805
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+ T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 806 IHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-AD 864
Query: 168 GYAIKDPKRLSTIKELLFNVL 188
+ DP+ ++E + L
Sbjct: 865 NQPLSDPELCRRLQEAIVQQL 885
Score = 43.5 bits (101), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPEVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF + D D + + D E+ +Q+
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNQPLSDPELCRRLQE 879
>gi|295687464|ref|YP_003591157.1| UTP-Glnb uridylyltransferase GlnD [Caulobacter segnis ATCC 21756]
gi|295429367|gb|ADG08539.1| UTP-GlnB uridylyltransferase, GlnD [Caulobacter segnis ATCC 21756]
Length = 940
Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V +DN+ DATV++ ++ G+L + + L D L I+ A+I G +D F V
Sbjct: 834 PSVTVDNDASDDATVVEASGRDRPGLLHALAKSLADSGLSIQSAHIDGYGERAVDAFYVQ 893
Query: 75 DCDGKKIRDKEVIDYIQ----QRLETDASFAPSLR 105
G+KI + I+ ++ LE + + AP+ R
Sbjct: 894 TAQGEKITETRRINALKADLLDALEQNEAGAPAAR 928
Score = 38.5 bits (88), Expect = 3.3, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172
+++ T +E +G DRPGL + LAD ++ +A I + +RA +V + G I
Sbjct: 843 SDDATVVEASGRDRPGLLHALAKSLADSGLSIQSAHIDGYGERAVDAFYVQT-AQGEKIT 901
Query: 173 DPKRLSTIKELLFNVL 188
+ +R++ +K L + L
Sbjct: 902 ETRRINALKADLLDAL 917
>gi|163757730|ref|ZP_02164819.1| PII uridylyl-transferase [Hoeflea phototrophica DFL-43]
gi|162285232|gb|EDQ35514.1| PII uridylyl-transferase [Hoeflea phototrophica DFL-43]
Length = 953
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V I N TVI+++ +++ G+L ++ VL+D++L I A+I++ G +D F V
Sbjct: 834 PQVTISNALSNKFTVIELECLDRPGLLSEITSVLSDLSLDIASAHITTFGEKVVDTFYVR 893
Query: 75 DCDGKKIRDKEVIDYIQQRLET 96
D G KI ++ I RL+
Sbjct: 894 DLVGMKITNENRQTNIVARLKA 915
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE DRPGL SE+ +VL+DL ++ +A I T ++ +V D G I + R
Sbjct: 847 TVIELECLDRPGLLSEITSVLSDLSLDIASAHITTFGEKVVDTFYVRD-LVGMKITNENR 905
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 207
+ I L VL DD + + PPG++
Sbjct: 906 QTNIVARLKAVLAKEDDELRDQM---PPGMI 933
>gi|417142937|ref|ZP_11985318.1| protein-P-II uridylyltransferase [Escherichia coli 97.0259]
gi|417306695|ref|ZP_12093583.1| [Protein-PII] uridylyltransferase [Escherichia coli PCN033]
gi|432872709|ref|ZP_20092525.1| [protein-PII] uridylyltransferase [Escherichia coli KTE147]
gi|338771740|gb|EGP26472.1| [Protein-PII] uridylyltransferase [Escherichia coli PCN033]
gi|386154962|gb|EIH11320.1| protein-P-II uridylyltransferase [Escherichia coli 97.0259]
gi|431406054|gb|ELG89286.1| [protein-PII] uridylyltransferase [Escherichia coli KTE147]
Length = 890
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVSAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|269101937|ref|ZP_06154634.1| [Protein-PII] uridylyltransferase [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268161835|gb|EEZ40331.1| [Protein-PII] uridylyltransferase [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 873
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 17/159 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P ++I T + V S +K + V+ L+ NL + A I +S G+ +D F V
Sbjct: 680 PLILISKKPTRGGTEVFVYSKDKAKLFAIVVAELDKKNLSVHDAQIMNSKDGYTLDTFMV 739
Query: 74 IDCDGKKIRDKE--VIDYIQQRLETDASFAP------------SLRSSVGVMPTE--EHT 117
+D +GK I + VI ++ T+ F ++++ V + T+ + T
Sbjct: 740 LDPNGKAISENRHAVISKALKKALTEMKFERKKRRTRRQLLHFNVKTRVDFLATKNGKKT 799
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+E D PGL + V +V A+ + ++ A+I T +RA
Sbjct: 800 MVELVALDTPGLLATVGSVFANQNLSLQAAKITTIGERA 838
>gi|410089166|ref|ZP_11285792.1| PII uridylyl-transferase [Pseudomonas viridiflava UASWS0038]
gi|409763453|gb|EKN48413.1| PII uridylyl-transferase [Pseudomonas viridiflava UASWS0038]
Length = 899
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 87/200 (43%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 748
Query: 71 FNVIDCDGKKIRDKEVI----------------DY---IQQRLETDA---SFAPSLRSSV 108
+ V+D +G I D V DY I++R+ +FAP + ++
Sbjct: 749 YIVLDNEGGSIGDNPVRVQEIREGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-ADN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ + DP+ S ++E + L
Sbjct: 866 HPLSDPQLCSRLQEAIIKQL 885
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 781 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF + D D + D ++ +Q+
Sbjct: 841 SLQNAKIATLGERVEDVFFITDADNHPLSDPQLCSRLQE 879
>gi|320352506|ref|YP_004193845.1| UTP-GlnB uridylyltransferase, GlnD [Desulfobulbus propionicus DSM
2032]
gi|320121008|gb|ADW16554.1| UTP-GlnB uridylyltransferase, GlnD [Desulfobulbus propionicus DSM
2032]
Length = 872
Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 41/79 (51%)
Query: 16 RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVID 75
+VVIDN T T+++V + L + Q L D L I +A I+++ +DVF V
Sbjct: 768 KVVIDNQTSHQYTIVEVYGADSRSTLYHLTQTLADFGLAIHRARIATEVEQLIDVFYVRT 827
Query: 76 CDGKKIRDKEVIDYIQQRL 94
G K+ D E +D ++ L
Sbjct: 828 QAGDKLTDVEAMDKVRLTL 846
>gi|86139310|ref|ZP_01057880.1| PII uridylyl-transferase [Roseobacter sp. MED193]
gi|85824154|gb|EAQ44359.1| PII uridylyl-transferase [Roseobacter sp. MED193]
Length = 937
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L N+ I A I++ G +D F V
Sbjct: 844 PTHITFDNEGSEIYTIIEVDTRDRTGLLYDLARTLAGANVYIANAVIATYGEQVVDTFYV 903
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K K D+++++L
Sbjct: 904 KDMFGLKYHSKSKQDFLERKL 924
>gi|432711854|ref|ZP_19946908.1| [protein-PII] uridylyltransferase [Escherichia coli KTE8]
gi|431260398|gb|ELF52496.1| [protein-PII] uridylyltransferase [Escherichia coli KTE8]
Length = 890
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + E+I + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEIIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|421775131|ref|ZP_16211741.1| protein-P-II uridylyltransferase [Escherichia coli AD30]
gi|408459563|gb|EKJ83344.1| protein-P-II uridylyltransferase [Escherichia coli AD30]
Length = 890
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGNPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGRIFADLGISLHGARITTIGER 853
>gi|398877479|ref|ZP_10632624.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM67]
gi|398202374|gb|EJM89220.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM67]
Length = 900
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG K+IR+ + DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 866 QPLSDPLLCSRLQDAIVEQL 885
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D + + + D + +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSRLQ 878
>gi|218195969|gb|EEC78396.1| hypothetical protein OsI_18182 [Oryza sativa Indica Group]
Length = 457
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 65/145 (44%), Gaps = 5/145 (3%)
Query: 9 IRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFM 68
++R+ + DN T+++++ ++ G+L +++ + D ++ + SD F
Sbjct: 252 MKRVQKATINFDNTLSPAHTLLQINCADQKGLLYDILRTMKDCSIQVTYGRFWSDKKGFR 311
Query: 69 DV-FNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGT 124
+V + DGKKI D E D + RL ++ P V P E +E +G
Sbjct: 312 EVDLFIKQADGKKIIDPEKQDVLSSRLRSEM-LHPLRVMIVNRGPDVELLVANPVELSGK 370
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEI 149
RP +F + L L + +AEI
Sbjct: 371 GRPRVFYDATFALKALGICIFSAEI 395
>gi|124360724|gb|ABN08701.1| Amino acid-binding ACT [Medicago truncatula]
Length = 328
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%)
Query: 19 IDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDG 78
++N+T ++T + + NK G+L + +V + L I KA + +G +F F V D G
Sbjct: 53 VENSTSDNSTAFLIRARNKIGLLQIITRVFKILGLTIDKATVEFEGDYFTKKFFVTDSHG 112
Query: 79 KKIRDKEVIDYIQQRL 94
KI D E ++ I++ L
Sbjct: 113 NKIEDDENLERIKRAL 128
>gi|170727622|ref|YP_001761648.1| PII uridylyl-transferase [Shewanella woodyi ATCC 51908]
gi|169812969|gb|ACA87553.1| UTP-GlnB uridylyltransferase, GlnD [Shewanella woodyi ATCC 51908]
Length = 859
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 73/178 (41%), Gaps = 35/178 (19%)
Query: 6 AKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
A L + P V+I +T T + + +K + V+ VL++ N+ + A + +S
Sbjct: 654 AILKHKQTEPLVLISKHTTRGGTELFIYGQDKPKLFATVMAVLDNKNIDVHDATVMASKD 713
Query: 65 GWFMDVFNVIDCDGKKIRDKEVIDYIQQRL--------------------------ETDA 98
G+ +D F +++ DG + I +++ L T
Sbjct: 714 GYVLDSFVILEQDGTPVSQISRIQSLRKALIKALNSDTAKLPKFKKLSRQMKPFNVPTRV 773
Query: 99 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
SF PS RSS +M E D PGL ++V +L ++ A+I T +RA
Sbjct: 774 SFLPSRRSSTSMM--------ELIALDSPGLLAKVGDILYRCQIRLLAAKITTIGERA 823
>gi|398907733|ref|ZP_10654028.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM50]
gi|398171049|gb|EJM58964.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM50]
Length = 900
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG K+IR+ + DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 866 QPLSDPLLCSRLQDAIVEQL 885
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D + + + D + +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSRLQ 878
>gi|87307240|ref|ZP_01089385.1| uridylyltransferase/uridylyl-removing enzyme glnD [Blastopirellula
marina DSM 3645]
gi|87289980|gb|EAQ81869.1| uridylyltransferase/uridylyl-removing enzyme glnD [Blastopirellula
marina DSM 3645]
Length = 882
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 101/225 (44%), Gaps = 40/225 (17%)
Query: 3 DEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKH-----GILLQVIQVLNDVNLVIKK 57
DE A+L +++ + AD VI++ +V H G+ ++ ++ + + I
Sbjct: 662 DELAQL-QKLPVEGAFVSTTYLADHDVIEI-TVGTHEQVVPGVFHRIAGAVSSLRMSILS 719
Query: 58 AYISSDG-GWFMDVFNVIDCDGKKIRDKEVIDYIQQRLE------TDASFAPSLRS---- 106
A I++ G +D F VID + E +D + +++ DA P+ RS
Sbjct: 720 AEINTLADGLVLDRFYVIDQESSGEPAAERMDDLATKIKKMVLDKNDAP--PNFRSRWTS 777
Query: 107 -------SVGVMPTE---------EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIW 150
V V+PTE + + +E +R GL + + L +V A+I
Sbjct: 778 KASRTAAHVQVLPTEVKIDNGTSEQFSIVEVFAHNRVGLLYAISRAIFQLGLSVSIAKIA 837
Query: 151 THNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFR 195
TH D+ V +V+D + G I+D +RL I+E L + + D+FR
Sbjct: 838 THLDQVVDVFYVSDEA-GEKIEDEQRLQEIREHLIDAV---DEFR 878
>gi|222629957|gb|EEE62089.1| hypothetical protein OsJ_16873 [Oryza sativa Japonica Group]
Length = 443
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 65/145 (44%), Gaps = 5/145 (3%)
Query: 9 IRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFM 68
++R+ + DN T+++++ ++ G+L +++ + D ++ + SD F
Sbjct: 252 MKRVQKATINFDNTLSPAHTLLQINCADQKGLLYDILRTMKDCSIQVTYGRFWSDKKGFR 311
Query: 69 DV-FNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGT 124
+V + DGKKI D E D + RL ++ P V P E +E +G
Sbjct: 312 EVDLFIKQADGKKIIDPEKQDVLSSRLRSEM-LHPLRVMIVNRGPDVELLVANPVELSGK 370
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEI 149
RP +F + L L + +AEI
Sbjct: 371 GRPRVFYDATFALKALGICIFSAEI 395
>gi|49393|emb|CAA79887.1| PII Uridylyl-transferase [Escherichia coli]
Length = 890
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQRTRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGNPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|398936503|ref|ZP_10667004.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM41(2012)]
gi|398167815|gb|EJM55852.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM41(2012)]
Length = 900
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG K+IR+ + DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPTRVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 866 QPLSDPLLCSRLQDAIVEQL 885
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D + + + D + +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSRLQ 878
>gi|262044764|ref|ZP_06017810.1| uridylyltransferase, partial [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259037876|gb|EEW39101.1| uridylyltransferase [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
Length = 230
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P +++ + T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 32 LNKPMILLSSQATRGGTEIFIWSPDRPYLFAAVCGELDRRNLSVHDAQIFTTRDGMAMDT 91
Query: 71 FNVIDCDGKKIRDKEVIDYIQQRLE---TDASFAP-------------SLRSSVGVMPT- 113
F V++ DG + + + I+Q LE T S+ P S+ + V +PT
Sbjct: 92 FIVLEPDGSPL-SADRHEAIRQGLEQTITQRSWQPPAPRRQAAKLRHFSVDTEVNFLPTH 150
Query: 114 -EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 151 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGER 193
>gi|413917417|gb|AFW57349.1| hypothetical protein ZEAMMB73_563855 [Zea mays]
gi|413917418|gb|AFW57350.1| hypothetical protein ZEAMMB73_563855 [Zea mays]
Length = 210
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNK 37
DDEY K I+ MNPPRV IDN +C A VI +SV++
Sbjct: 24 DDEYQKFIQNMNPPRVTIDNTSCPSAIVIH-ESVHR 58
>gi|227326535|ref|ZP_03830559.1| PII uridylyl-transferase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 904
Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats.
Identities = 53/199 (26%), Positives = 93/199 (46%), Gaps = 20/199 (10%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P V+I + T I + S ++ + V L+ NL + A I +S G MD
Sbjct: 703 VNKPLVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 762
Query: 71 FNVIDCDGKKI-RDK-EVIDYIQQRLETDASF--------APSLR-----SSVGVMPT-- 113
F V++ DG + +D+ E+I + ++ T + +P LR + V +PT
Sbjct: 763 FIVLEPDGSPLAQDRHEMIRHALEQALTHRHYQHPRVRRPSPKLRHFSVPTEVNFLPTHT 822
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
+ + +E + D+PGL + + + ADL+ ++ A I T +R + + D S A+K
Sbjct: 823 DRRSYMELSALDQPGLLARIGEIFADLNLSLHGARISTIGERVEDLFILAD-SDRRALKP 881
Query: 174 PKRLSTIKELLFNVLRGYD 192
RL ++E L L D
Sbjct: 882 DLRLK-LQERLTEALNPND 899
>gi|271963324|ref|YP_003337520.1| (protein-PII) uridylyltransferase [Streptosporangium roseum DSM
43021]
gi|270506499|gb|ACZ84777.1| (Protein-PII) uridylyltransferase [Streptosporangium roseum DSM
43021]
Length = 761
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 43/73 (58%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVF 71
+ PPRV + ++ ATV++V + ++ G+L ++ + D L ++ A + + G +DVF
Sbjct: 674 VAPPRVTLVDDASNTATVVEVRAHDRPGLLWRIGRAFGDCGLDVRAARVETLGAEAVDVF 733
Query: 72 NVIDCDGKKIRDK 84
V+D G+ + D+
Sbjct: 734 YVVDRAGRPLTDE 746
>gi|90413527|ref|ZP_01221518.1| PII uridylyl-transferase [Photobacterium profundum 3TCK]
gi|90325459|gb|EAS41942.1| PII uridylyl-transferase [Photobacterium profundum 3TCK]
Length = 874
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 75/168 (44%), Gaps = 17/168 (10%)
Query: 6 AKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
A L + P +++ T + V + +K + V+ L+ NL + A I +S
Sbjct: 673 ALLTHDHDKPLILLSKKATRGGTEVFVYNKDKAKLFAIVVSELDKKNLSVHDAQIMNSKD 732
Query: 65 GWFMDVFNVIDCDGKKI--------RDKEVIDYIQQRLETDASFAP------SLRSSVGV 110
G+ +D F V+D G+ I R V + + E AP ++++ V
Sbjct: 733 GYTLDTFMVLDPSGQAIPENRHNTIRRALVNALTKMKSERKNKRAPRKLMHFNVKTQVDF 792
Query: 111 MPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+PT+ + T++E D PGL + + AV A ++ A+I T +RA
Sbjct: 793 LPTKTGKKTTMELIALDTPGLLARIGAVFAKQKVSLQAAKITTIGERA 840
>gi|378977073|ref|YP_005225214.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|402782334|ref|YP_006637880.1| [protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|421913573|ref|ZP_16343250.1| [Protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|421919192|ref|ZP_16348698.1| [Protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|428148700|ref|ZP_18996553.1| [Protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
gi|364516484|gb|AEW59612.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|402543196|gb|AFQ67345.1| [Protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|410112518|emb|CCM85875.1| [Protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|410118484|emb|CCM91323.1| [Protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|427541341|emb|CCM92691.1| [Protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
Length = 867
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P +++ + T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 669 LNKPMILLSSQATRGGTEIFIWSPDRPYLFAAVCGELDRRNLSVHDAQIFTTRDGMAMDT 728
Query: 71 FNVIDCDGKKIRDKEVIDYIQQRLE---TDASFAP-------------SLRSSVGVMPT- 113
F V++ DG + + + I+Q LE T S+ P S+ + V +PT
Sbjct: 729 FIVLEPDGSPL-SADRHEAIRQGLEQTITQRSWQPPAPRRQAAKLRHFSVDTEVNFLPTH 787
Query: 114 -EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 788 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGER 830
>gi|452751845|ref|ZP_21951590.1| [Protein-PII] uridylyltransferase [alpha proteobacterium JLT2015]
gi|451961064|gb|EMD83475.1| [Protein-PII] uridylyltransferase [alpha proteobacterium JLT2015]
Length = 908
Score = 45.8 bits (107), Expect = 0.017, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 46/80 (57%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV++ N TVI+V++ ++ G+L +++ L D + I A+I++ G +D F +
Sbjct: 815 PRVLVQPNASNRFTVIEVNAADRPGLLYALLRTLFDAKVTIHSAHITTYGERAVDTFYMT 874
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G+K+ + + ++ RL
Sbjct: 875 DLTGQKLDGSQRLKGLETRL 894
Score = 42.0 bits (97), Expect = 0.27, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 5/120 (4%)
Query: 72 NVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMP--TEEHTSIEFTGTDRPGL 129
++ D K+R +E + Q+ L + A +++ V V P + T IE DRPGL
Sbjct: 783 SIADVLAGKVRLRE--ELAQRPLPQRRADAFAVQPRVLVQPNASNRFTVIEVNAADRPGL 840
Query: 130 FSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLR 189
+ L D + +A I T+ +RA ++TD TG + +RL ++ L N ++
Sbjct: 841 LYALLRTLFDAKVTIHSAHITTYGERAVDTFYMTD-LTGQKLDGSQRLKGLETRLLNAVK 899
>gi|145629183|ref|ZP_01784982.1| PII uridylyl-transferase [Haemophilus influenzae 22.1-21]
gi|144978686|gb|EDJ88409.1| PII uridylyl-transferase [Haemophilus influenzae 22.1-21]
Length = 863
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 71/145 (48%), Gaps = 22/145 (15%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDA----SFAPSLRSSVGVMP 112
I++ G+ D F + + +G+ + R +E+ + L+++ S P+ + +
Sbjct: 720 ITTQDGYVFDSFIITELNGELVEFDRRRELEQALTVALQSEKLPALSITPNRQLQHFTVQ 779
Query: 113 TE---------EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT 163
T+ EHT +E D+PGL ++V + +L+ N++NA+I T ++A +T
Sbjct: 780 TDVRFLHENKKEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILT 839
Query: 164 DHSTGYAIKDPKRLSTIKELLFNVL 188
+ G A+ +R E+L NVL
Sbjct: 840 NQ-FGQALDSQQR-----EILRNVL 858
>gi|238893163|ref|YP_002917897.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|330001644|ref|ZP_08304070.1| protein-P-II uridylyltransferase [Klebsiella sp. MS 92-3]
gi|386033242|ref|YP_005953155.1| PII uridylyl-transferase [Klebsiella pneumoniae KCTC 2242]
gi|419975543|ref|ZP_14490952.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|419981409|ref|ZP_14496685.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|419986654|ref|ZP_14501784.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|419992331|ref|ZP_14507288.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|419998633|ref|ZP_14513418.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|420004521|ref|ZP_14519157.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|420010288|ref|ZP_14524763.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|420016399|ref|ZP_14530691.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|420021806|ref|ZP_14535982.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|420027326|ref|ZP_14541320.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|420033248|ref|ZP_14547055.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|420038706|ref|ZP_14552350.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|420044836|ref|ZP_14558312.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|420050742|ref|ZP_14564038.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|420056029|ref|ZP_14569190.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|420060976|ref|ZP_14573970.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|420067686|ref|ZP_14580476.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|420072904|ref|ZP_14585537.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|420078757|ref|ZP_14591211.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|424829043|ref|ZP_18253771.1| protein-P-II uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|425078298|ref|ZP_18481401.1| [protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425079945|ref|ZP_18483042.1| [protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|425088930|ref|ZP_18492023.1| [protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|425090064|ref|ZP_18493149.1| [protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|428931636|ref|ZP_19005229.1| PII uridylyl-transferase [Klebsiella pneumoniae JHCK1]
gi|428940394|ref|ZP_19013479.1| PII uridylyl-transferase [Klebsiella pneumoniae VA360]
gi|449058387|ref|ZP_21736596.1| PII uridylyl-transferase [Klebsiella pneumoniae hvKP1]
gi|238545479|dbj|BAH61830.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|328537586|gb|EGF63806.1| protein-P-II uridylyltransferase [Klebsiella sp. MS 92-3]
gi|339760370|gb|AEJ96590.1| PII uridylyl-transferase [Klebsiella pneumoniae KCTC 2242]
gi|397342764|gb|EJJ35920.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|397343243|gb|EJJ36392.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|397347338|gb|EJJ40446.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|397359874|gb|EJJ52561.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|397361256|gb|EJJ53921.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|397365516|gb|EJJ58139.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|397374980|gb|EJJ67288.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|397379053|gb|EJJ71253.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|397386391|gb|EJJ78474.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|397393624|gb|EJJ85377.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|397395588|gb|EJJ87293.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|397403997|gb|EJJ95529.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|397410579|gb|EJK01856.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|397411053|gb|EJK02318.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|397421045|gb|EJK12081.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|397427733|gb|EJK18495.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|397432077|gb|EJK22742.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|397438573|gb|EJK29065.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|397444465|gb|EJK34740.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|405590159|gb|EKB63693.1| [protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405600068|gb|EKB73235.1| [protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|405606870|gb|EKB79840.1| [protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|405614628|gb|EKB87327.1| [protein-PII] uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|414706460|emb|CCN28164.1| protein-P-II uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|426302350|gb|EKV64555.1| PII uridylyl-transferase [Klebsiella pneumoniae VA360]
gi|426307908|gb|EKV69981.1| PII uridylyl-transferase [Klebsiella pneumoniae JHCK1]
gi|448875381|gb|EMB10400.1| PII uridylyl-transferase [Klebsiella pneumoniae hvKP1]
Length = 887
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P +++ + T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 689 LNKPMILLSSQATRGGTEIFIWSPDRPYLFAAVCGELDRRNLSVHDAQIFTTRDGMAMDT 748
Query: 71 FNVIDCDGKKIRDKEVIDYIQQRLE---TDASFAP-------------SLRSSVGVMPT- 113
F V++ DG + + + I+Q LE T S+ P S+ + V +PT
Sbjct: 749 FIVLEPDGSPL-SADRHEAIRQGLEQTITQRSWQPPAPRRQAAKLRHFSVDTEVNFLPTH 807
Query: 114 -EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 808 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGER 850
>gi|365142822|ref|ZP_09347861.1| [protein-PII] uridylyltransferase [Klebsiella sp. 4_1_44FAA]
gi|363651116|gb|EHL90197.1| [protein-PII] uridylyltransferase [Klebsiella sp. 4_1_44FAA]
Length = 887
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P +++ + T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 689 LNKPMILLSSQATRGGTEIFIWSPDRPYLFAAVCGELDRRNLSVHDAQIFTTRDGMAMDT 748
Query: 71 FNVIDCDGKKIRDKEVIDYIQQRLE---TDASFAP-------------SLRSSVGVMPT- 113
F V++ DG + + + I+Q LE T S+ P S+ + V +PT
Sbjct: 749 FIVLEPDGSPL-SADRHEAIRQGLEQTITQRSWQPPAPRRQAAKLRHFSVDTEVNFLPTH 807
Query: 114 -EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 808 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGER 850
>gi|126732334|ref|ZP_01748134.1| PII uridylyl-transferase [Sagittula stellata E-37]
gi|126707203|gb|EBA06269.1| PII uridylyl-transferase [Sagittula stellata E-37]
Length = 896
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 3 DEYAKLIRRMN-PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
D+Y K R P + DN T+I+VD+ ++ +L + +VL N+ I A I+
Sbjct: 791 DKYKKRERAFKVPTHITFDNEGSEIFTIIEVDTRDRPSLLYDLARVLASQNIYIASAVIA 850
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
+ G +D F V D G K+ K D I+++L
Sbjct: 851 TYGEQVVDTFYVKDMFGLKLHSKTKRDLIEKKL 883
>gi|152968761|ref|YP_001333870.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|424935000|ref|ZP_18353372.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KpQ3]
gi|150953610|gb|ABR75640.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|407809187|gb|EKF80438.1| PII uridylyl-transferase [Klebsiella pneumoniae subsp. pneumoniae
KpQ3]
Length = 887
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P +++ + T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 689 LNKPMILLSSQATRGGTEIFIWSPDRPYLFAAVCGELDRRNLSVHDAQIFTTRDGMAMDT 748
Query: 71 FNVIDCDGKKIRDKEVIDYIQQRLE---TDASFAP-------------SLRSSVGVMPT- 113
F V++ DG + + + I+Q LE T S+ P S+ + V +PT
Sbjct: 749 FIVLEPDGSPL-SADRHEAIRQGLEQTITQRSWQPPAPRRQAAKLRHFSVDTEVNFLPTH 807
Query: 114 -EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 808 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGER 850
>gi|145633652|ref|ZP_01789379.1| PII uridylyl-transferase [Haemophilus influenzae 3655]
gi|229845252|ref|ZP_04465385.1| PII uridylyl-transferase [Haemophilus influenzae 6P18H1]
gi|144985529|gb|EDJ92345.1| PII uridylyl-transferase [Haemophilus influenzae 3655]
gi|229811847|gb|EEP47543.1| PII uridylyl-transferase [Haemophilus influenzae 6P18H1]
Length = 863
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 36/152 (23%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPT-- 113
I++ G+ D F + + +G E++++ ++R E + + +L+S ++ + P
Sbjct: 720 ITTQDGYVFDSFIITELNG------ELVEFDRRR-ELEQALTVALQSKKLPALSITPNRQ 772
Query: 114 -----------------EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+EHT +E D+PGL ++V + +L+ N++NA+I T ++A
Sbjct: 773 LQHFTVQTDVRFLHENKKEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKA 832
Query: 157 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+T+ G A+ +R E+L NVL
Sbjct: 833 EDFFILTNQ-FGQALDSQQR-----EILRNVL 858
>gi|419761889|ref|ZP_14288140.1| protein-P-II uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|397745430|gb|EJK92637.1| protein-P-II uridylyltransferase [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
Length = 887
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P +++ + T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 689 LNKPMILLSSQATRGGTEIFIWSPDRPYLFAAVCGELDRRNLSVHDAQIFTTRDGMAMDT 748
Query: 71 FNVIDCDGKKIRDKEVIDYIQQRLE---TDASFAP-------------SLRSSVGVMPT- 113
F V++ DG + + + I+Q LE T S+ P S+ + V +PT
Sbjct: 749 FIVLEPDGSPL-SADRHEAIRQGLEQTITQRSWQPPAPRRQAAKLRHFSVDTEVNFLPTH 807
Query: 114 -EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 808 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGER 850
>gi|217978933|ref|YP_002363080.1| PII uridylyl-transferase [Methylocella silvestris BL2]
gi|217504309|gb|ACK51718.1| UTP-GlnB uridylyltransferase, GlnD [Methylocella silvestris BL2]
Length = 937
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T +E +G DRPGL ++ +++L N+ +A I T ++AA V +V+D+ G I +P R
Sbjct: 853 TVVEVSGLDRPGLLFDLTTAISELDLNIGSAHIATFGEKAADVFYVSDNE-GTKITEPVR 911
Query: 177 LSTIKELLFNVL 188
++ + ++
Sbjct: 912 QEAVRRKILHIF 923
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 41/69 (59%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V +DN+ TV++V +++ G+L + +++++L I A+I++ G DVF V
Sbjct: 840 PEVTLDNSLSNRFTVVEVSGLDRPGLLFDLTTAISELDLNIGSAHIATFGEKAADVFYVS 899
Query: 75 DCDGKKIRD 83
D +G KI +
Sbjct: 900 DNEGTKITE 908
>gi|319896795|ref|YP_004134989.1| uridylyltransferase [Haemophilus influenzae F3031]
gi|317432298|emb|CBY80651.1| uridylyltransferase [Haemophilus influenzae F3031]
Length = 863
Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats.
Identities = 36/145 (24%), Positives = 72/145 (49%), Gaps = 22/145 (15%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDA----SFAPSLRSSVGVMP 112
I++ G+ D F + + +G+ + R +E+ + L+++ S P+ + ++
Sbjct: 720 ITTQDGYVFDSFIITELNGELVEFDRRRELEQALTVALQSEKLPALSITPNRQLQHFIVQ 779
Query: 113 TE---------EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT 163
T+ EHT +E D+PGL ++V + +L+ N++NA+I T ++A +T
Sbjct: 780 TDVRFLHENKKEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILT 839
Query: 164 DHSTGYAIKDPKRLSTIKELLFNVL 188
+ G A+ +R E+L NVL
Sbjct: 840 NQ-FGQALDSQQR-----EILRNVL 858
>gi|222640166|gb|EEE68298.1| hypothetical protein OsJ_26556 [Oryza sativa Japonica Group]
Length = 280
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 89/203 (43%), Gaps = 33/203 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG-GWFMDVFNV 73
P+V+ID ++ DAT++++ ++ G LL + L ++ L + KA + D G + +
Sbjct: 74 PKVIIDQDSDPDATIVEITLGDRLGDLLDTMNALKNLGLNVVKASVCLDSTGKHIKLAIT 133
Query: 74 IDCDGKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMPTEEHTSIEFT---- 122
G+KI + E+++ ++ + +AS +L ++ G P E ++
Sbjct: 134 KLSTGRKIGEPELLEAVRLTIINNMIQYHPEASSQLALGATFGPEPPTELVDVDIATHID 193
Query: 123 --------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
DRPGL ++ ++ D++ V + E T A A HV+
Sbjct: 194 IYDDGPDRSLLVVETADRPGLLVDLVKIIDDINITVQSGEFDTEGLLAKAKFHVS----- 248
Query: 169 YAIKDPKRLSTIKELLFNVLRGY 191
+ + ++++L N LR +
Sbjct: 249 --YRGKPLIKALQQVLANSLRYF 269
>gi|223939705|ref|ZP_03631578.1| UTP-GlnB uridylyltransferase, GlnD [bacterium Ellin514]
gi|223891662|gb|EEF58150.1| UTP-GlnB uridylyltransferase, GlnD [bacterium Ellin514]
Length = 925
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P ++ DN T T I+V++ ++ G+L + + L ++ L I A I ++ G +D F V
Sbjct: 838 PTQLHFDNETSESRTAIEVETEDRIGLLYAISEALAELELNISAAKIVTEKGAAIDTFYV 897
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
+ DG KI D ++++++
Sbjct: 898 NELDGSKILDPGRQSFVERKI 918
>gi|330445143|ref|ZP_08308795.1| protein-P-II uridylyltransferase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489334|dbj|GAA03292.1| protein-P-II uridylyltransferase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 873
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 19/160 (11%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P +++ T + V S +K + V+ L+ NL + A I +S G+ +D F V
Sbjct: 681 PLILLSKKATRGGTEVFVYSKDKAKLFAIVVSELDKKNLSVHDAQIMNSKDGYTLDTFMV 740
Query: 74 IDCDGKKIRDKEVIDYIQQRLETDASFAPSLR---------------SSVGVMPTE--EH 116
+D +GK I + I++ L + S R + V +PT+ +
Sbjct: 741 LDPNGKAINENRHTT-IRRALTKALTVMKSERKIRRAPRKLLHFNVPTEVSFLPTKTGKK 799
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
T +E D PGL ++V +V A+ + ++ A+I T +RA
Sbjct: 800 TMMELVALDMPGLLAKVGSVFAEHNVSLQAAKITTIGERA 839
>gi|345849786|ref|ZP_08802793.1| PII uridylyl-transferase [Streptomyces zinciresistens K42]
gi|345638767|gb|EGX60267.1| PII uridylyl-transferase [Streptomyces zinciresistens K42]
Length = 815
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 42/83 (50%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV + ATVI+V + + G+L ++ + L D + ++ A+ + G +D F V
Sbjct: 730 PPRVSVHPAASRQATVIEVRAQDAPGLLFRIGRALEDAGVRVRSAHAGTLGANAVDAFYV 789
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
+G + +E + ++ ET
Sbjct: 790 TGPEGAPLPGEEAVSVARKLEET 812
>gi|187608845|sp|P83643.2|UP12_ORYSI RecName: Full=Unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic; Flags: Precursor
gi|187663980|sp|Q0J709.2|UP12_ORYSJ RecName: Full=Unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic; Flags: Precursor
Length = 283
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 89/203 (43%), Gaps = 33/203 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG-GWFMDVFNV 73
P+V+ID ++ DAT++++ ++ G LL + L ++ L + KA + D G + +
Sbjct: 77 PKVIIDQDSDPDATIVEITLGDRLGDLLDTMNALKNLGLNVVKASVCLDSTGKHIKLAIT 136
Query: 74 IDCDGKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMPTEEHTSIEFT---- 122
G+KI + E+++ ++ + +AS +L ++ G P E ++
Sbjct: 137 KLSTGRKIGEPELLEAVRLTIINNMIQYHPEASSQLALGATFGPEPPTELVDVDIATHID 196
Query: 123 --------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
DRPGL ++ ++ D++ V + E T A A HV+
Sbjct: 197 IYDDGPDRSLLVVETADRPGLLVDLVKIIDDINITVQSGEFDTEGLLAKAKFHVS----- 251
Query: 169 YAIKDPKRLSTIKELLFNVLRGY 191
+ + ++++L N LR +
Sbjct: 252 --YRGKPLIKALQQVLANSLRYF 272
>gi|251790747|ref|YP_003005468.1| PII uridylyl-transferase [Dickeya zeae Ech1591]
gi|247539368|gb|ACT07989.1| UTP-GlnB uridylyltransferase, GlnD [Dickeya zeae Ech1591]
Length = 893
Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 73/168 (43%), Gaps = 18/168 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V+I + T I + S ++ + V L+ NL + A I +S G MD F V
Sbjct: 696 PMVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIV 755
Query: 74 IDCDGKKI---RDKEVIDYIQQRLETDASFAPSLR------------SSVGVMPT--EEH 116
++ DG + R + I+Q L P +R + VG +PT +
Sbjct: 756 LEPDGSPLAPDRHDMIRHAIEQALTQRDYQHPRVRRPSSRLRHFSVPTEVGFLPTHNDRR 815
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ +E D+PGL + V V ADL+ ++ A I T +R + + D
Sbjct: 816 SYMELVALDQPGLLARVGEVFADLNLSLHGARISTIGERVEDLFILAD 863
>gi|443623838|ref|ZP_21108327.1| putative protein-P-II uridylyltransferase [Streptomyces
viridochromogenes Tue57]
gi|443342703|gb|ELS56856.1| putative protein-P-II uridylyltransferase [Streptomyces
viridochromogenes Tue57]
Length = 815
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 44/83 (53%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV + ATVI+V + + G+L ++ + L D ++ ++ A++S+ G +D F V
Sbjct: 730 PPRVSVHPAASRLATVIEVRAQDAPGLLFRIGRALEDASVRVRSAHVSTLGANAVDAFYV 789
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
+G + +E ++ ET
Sbjct: 790 TGPEGAPLPSEEAASVARKLEET 812
>gi|417949099|ref|ZP_12592238.1| PII uridylyl-transferase [Vibrio splendidus ATCC 33789]
gi|342808707|gb|EGU43851.1| PII uridylyl-transferase [Vibrio splendidus ATCC 33789]
Length = 873
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 20/181 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDG 64
L+R +P P V+I T + V ++ + V+ L+ N + A + +S
Sbjct: 670 LLRLEDPSQPLVLISKKATRGGTEVFVYCKDQAALFATVVAELDRRNFNVHDAQVMASKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRL------ETDASFAP------SLRSSVG 109
G +D F V+D G I R K V ++ L + P +++ V
Sbjct: 730 GHVLDTFIVLDQHGNAIDEARHKAVAKHLTHVLADGRPTKVKTRRTPRNLQHFKVKTLVE 789
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ + T +E D PGL ++V A A+L N+ A+I T +RA + +T +
Sbjct: 790 FLPTKSKKRTLMELRALDTPGLLAQVGATFAELGINLHGAKITTIGERAEDLFILTSDTG 849
Query: 168 G 168
G
Sbjct: 850 G 850
>gi|218200735|gb|EEC83162.1| hypothetical protein OsI_28383 [Oryza sativa Indica Group]
Length = 280
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 89/203 (43%), Gaps = 33/203 (16%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG-GWFMDVFNV 73
P+V+ID ++ DAT++++ ++ G LL + L ++ L + KA + D G + +
Sbjct: 74 PKVIIDQDSDPDATIVEITLGDRLGDLLDTMNALKNLGLNVVKASVCLDSTGKHIKLAIT 133
Query: 74 IDCDGKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMPTEEHTSIEFT---- 122
G+KI + E+++ ++ + +AS +L ++ G P E ++
Sbjct: 134 KLSTGRKIGEPELLEAVRLTIINNMIQYHPEASSQLALGATFGPEPPTELVDVDIATHID 193
Query: 123 --------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
DRPGL ++ ++ D++ V + E T A A HV+
Sbjct: 194 IYDDGPDRSLLVVETADRPGLLVDLVKIIDDINITVQSGEFDTEGLLAKAKFHVS----- 248
Query: 169 YAIKDPKRLSTIKELLFNVLRGY 191
+ + ++++L N LR +
Sbjct: 249 --YRGKPLIKALQQVLANSLRYF 269
>gi|413917416|gb|AFW57348.1| hypothetical protein ZEAMMB73_563855 [Zea mays]
Length = 165
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 21/29 (72%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVI 30
DDEY K I+ MNPPRV IDN +C A VI
Sbjct: 24 DDEYQKFIQNMNPPRVTIDNTSCPSAIVI 52
>gi|59712571|ref|YP_205347.1| PII uridylyl-transferase [Vibrio fischeri ES114]
gi|62906877|sp|Q9XC07.2|GLND_VIBF1 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|59480672|gb|AAW86459.1| uridylyltransferase [Vibrio fischeri ES114]
Length = 873
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 85/191 (44%), Gaps = 19/191 (9%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVID 75
++I N T I V S ++ + V L+ ++ I A + SS G+ +D F V+D
Sbjct: 681 ILISKNASRGGTEIFVYSKDQPHLFATVAAELDRRSITIYDAQVMSSKDGYALDTFMVLD 740
Query: 76 CDGKKI---RDKEVIDYIQQ-RLETDASFAPSLR-----------SSVGVMPTE--EHTS 118
+ I R + +ID + +L A+ + R + + +PT+ + T
Sbjct: 741 QNDDPIDEERQQRLIDQLYDVKLNDQATHIKTRRPPRQLQHFNVKTRMEFLPTKTGKRTL 800
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
+EF D PGL + V A A L N+ A+I T +RA + +T G + D K+
Sbjct: 801 MEFVALDTPGLLATVGATFAQLGINLHAAKITTIGERAEDLFILTS-DVGGRLDDEKQAE 859
Query: 179 TIKELLFNVLR 189
L+ NV R
Sbjct: 860 LELALVKNVAR 870
>gi|238009308|gb|ACR35689.1| unknown [Zea mays]
Length = 155
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 21/29 (72%)
Query: 2 DDEYAKLIRRMNPPRVVIDNNTCADATVI 30
DDEY K I+ MNPPRV IDN +C A VI
Sbjct: 24 DDEYQKFIQNMNPPRVTIDNTSCPSAIVI 52
>gi|407366174|ref|ZP_11112706.1| PII uridylyl-transferase [Pseudomonas mandelii JR-1]
Length = 900
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 83/186 (44%), Gaps = 29/186 (15%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLRSSV 108
+ V+D DG K+IR+ + DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 865
Query: 169 YAIKDP 174
+ DP
Sbjct: 866 QPLSDP 871
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRD 83
++ A I++ G DVF + D + + + D
Sbjct: 841 SLQNAKIATLGERVEDVFFITDANNQPLSD 870
>gi|255074903|ref|XP_002501126.1| predicted protein [Micromonas sp. RCC299]
gi|226516389|gb|ACO62384.1| predicted protein [Micromonas sp. RCC299]
Length = 246
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 91/218 (41%), Gaps = 42/218 (19%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+IDN + ATV+ V + G LL ++ L + L + +A ++ D + F V
Sbjct: 34 PVVLIDNRSDPLATVVSVQFSDVLGQLLDTVESLKALGLNVSRAEVTGDENP--NKFYVT 91
Query: 75 DC-DGKKIRDKEVIDYI---------------QQRLETDASFAPSLR----SSVGVMP-- 112
D +K+ E I+ I +Q E P R + +G P
Sbjct: 92 DAATSEKVVKSEQIENIRMAIINNMLYYHPESKQYFEGGTVDMPGNRDVDANPLGARPRG 151
Query: 113 -TEEHTSIEFTGT----------DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH 161
+IE G DRPGL ++ L DL NVV+AEI T +A+ V+
Sbjct: 152 KVATKVTIEAMGAARSRLIVETADRPGLLVDIVRTLKDLSLNVVSAEIDTIGPKASDTVY 211
Query: 162 VTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKT 199
+T G A+ ++ EL+ N L Y ++ +T
Sbjct: 212 LTYR--GAALN-----PSMNELVVNALTYYLSKKEVET 242
>gi|206579824|ref|YP_002240345.1| PII uridylyl-transferase [Klebsiella pneumoniae 342]
gi|206568882|gb|ACI10658.1| protein-P-II uridylyltransferase [Klebsiella pneumoniae 342]
Length = 887
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 20/163 (12%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P +++ + T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 689 LNKPMILLSSQATRGGTEIFIWSPDRPYLFAAVCGELDRRNLSVHDAQIFTTRDGMAMDT 748
Query: 71 FNVIDCDGKKIRDKEVIDYIQQRLE---TDASFAP-------------SLRSSVGVMPT- 113
F V++ DG + + D I+ LE T S+ P S+ + V +PT
Sbjct: 749 FIVLEPDGSPL-SADRHDAIRHGLEQTITQRSWEPPAPRRQAAKLRHFSVPTEVNFLPTH 807
Query: 114 -EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 808 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGER 850
>gi|288937051|ref|YP_003441110.1| UTP-GlnB uridylyltransferase, GlnD [Klebsiella variicola At-22]
gi|290512472|ref|ZP_06551838.1| protein-P-II uridylyltransferase [Klebsiella sp. 1_1_55]
gi|288891760|gb|ADC60078.1| UTP-GlnB uridylyltransferase, GlnD [Klebsiella variicola At-22]
gi|289774813|gb|EFD82815.1| protein-P-II uridylyltransferase [Klebsiella sp. 1_1_55]
Length = 887
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 20/163 (12%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P +++ + T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 689 LNKPMILLSSQATRGGTEIFIWSPDRPYLFAAVCGELDRRNLSVHDAQIFTTRDGMAMDT 748
Query: 71 FNVIDCDGKKIRDKEVIDYIQQRLE---TDASFAP-------------SLRSSVGVMPT- 113
F V++ DG + + D I+ LE T S+ P S+ + V +PT
Sbjct: 749 FIVLEPDGSPL-SADRHDAIRHGLEQTITQRSWEPPAPRRQAAKLRHFSVPTEVNFLPTH 807
Query: 114 -EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 808 TDRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGER 850
>gi|425298339|ref|ZP_18688397.1| protein-P-II uridylyltransferase [Escherichia coli 07798]
gi|408222086|gb|EKI45993.1| protein-P-II uridylyltransferase [Escherichia coli 07798]
Length = 890
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ + I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGSRITTIGER 853
>gi|398984036|ref|ZP_10690345.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM24]
gi|399011339|ref|ZP_10713671.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM16]
gi|398118081|gb|EJM07821.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM16]
gi|398156153|gb|EJM44577.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM24]
Length = 900
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRDK------------EVI----DY---IQQRLETDA---SFAPSLRSSV 108
+ V+D +G+ I D E + DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDNEGESIGDNPARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITD-AHN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 866 QPLSDPLLCSRLQDAIVEQL 885
>gi|159484292|ref|XP_001700192.1| predicted protein [Chlamydomonas reinhardtii]
gi|158272508|gb|EDO98307.1| predicted protein [Chlamydomonas reinhardtii]
Length = 273
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 89/206 (43%), Gaps = 40/206 (19%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V IDN ATV+ V+ K+ LL + L ++ L I++A IS DG VF +
Sbjct: 67 PTVKIDNVVDPFATVLTVEFGEKNVELLDAVSALKNLGLNIRRATIS-DGST---VFYIT 122
Query: 75 DCD-GKKIRDKEVIDYIQQRL---------ETDASFAPSLRSS------VGVMPTEEHTS 118
D D +KI ++ I+ + E +FA ++ +G T+
Sbjct: 123 DADTSEKIVKSARLEDIRMTILNSLVDKFPEVGEAFASGSKTDSEPNKVLGTRRRVVQTT 182
Query: 119 IEFT-------------GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 165
I+ T +DRPGL ++ VL D++ NVV+AEI T A +T H
Sbjct: 183 IDVTEAKNGVCSLLRIVTSDRPGLLVDIVRVLKDINLNVVSAEIETEGPLAKDEFFITYH 242
Query: 166 STGYAIKDPKRLSTIKELLFNVLRGY 191
G + P + L+ N L+ Y
Sbjct: 243 --GEPLNSP-----MVTLVTNALQYY 261
>gi|399071685|ref|ZP_10750077.1| (protein-PII) uridylyltransferase [Caulobacter sp. AP07]
gi|398043201|gb|EJL36128.1| (protein-PII) uridylyltransferase [Caulobacter sp. AP07]
Length = 962
Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P VV+DN +ATV++ ++ G+L + + L D L I+ A+I G +D F V
Sbjct: 856 PTVVVDNEASNEATVVEASGRDRPGLLQALARTLADNGLSIQSAHIDGYGERAVDAFYVQ 915
Query: 75 DCDGKKIRDKEVIDYIQ----QRLETDASFAPSLR 105
+G K+ D + ++ LE + + APS R
Sbjct: 916 TSEGGKLADVRKVTTLKADLLAALEQNEAGAPSTR 950
Score = 43.1 bits (100), Expect = 0.12, Method: Composition-based stats.
Identities = 45/187 (24%), Positives = 81/187 (43%), Gaps = 25/187 (13%)
Query: 25 ADATVIKVDSVNKHGILLQVIQVLNDV--NLVIKKAYISSDGGWFMDVFNVIDCDGKKI- 81
A+A I V + ++ G+ + ++ + N+V + + S G +DVF+V D G +
Sbjct: 755 ANAAEIVVAAKDRRGLFADLALAISSLGGNVVGARVFTSRQGQ-ALDVFHVQDVTGAPLG 813
Query: 82 -RDKEVIDYIQQRLETDASFAP-----------SLRSSVGVMPT--------EEHTSIEF 121
+ + + LE P S ++ + PT E T +E
Sbjct: 814 CENPRALRRMADALEAAGRGEPLVMEPRRGGEQSRTAAFSIAPTVVVDNEASNEATVVEA 873
Query: 122 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 181
+G DRPGL + LAD ++ +A I + +RA +V S G + D ++++T+K
Sbjct: 874 SGRDRPGLLQALARTLADNGLSIQSAHIDGYGERAVDAFYVQT-SEGGKLADVRKVTTLK 932
Query: 182 ELLFNVL 188
L L
Sbjct: 933 ADLLAAL 939
>gi|326386427|ref|ZP_08208050.1| PII uridylyl-transferase [Novosphingobium nitrogenifigens DSM
19370]
gi|326209088|gb|EGD59882.1| PII uridylyl-transferase [Novosphingobium nitrogenifigens DSM
19370]
Length = 916
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ DN TVI+V ++++ +L + + L + L++ A+I++ G +D F V
Sbjct: 824 PIVIFDNKASDRFTVIEVGALDRPALLSSLARALFEARLIVYSAHIATYGERAVDTFYVT 883
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G+KI + + I++RL
Sbjct: 884 DILGEKITSESRLRSIERRL 903
>gi|145641019|ref|ZP_01796600.1| PII uridylyl-transferase [Haemophilus influenzae R3021]
gi|145274180|gb|EDK14045.1| PII uridylyl-transferase [Haemophilus influenzae 22.4-21]
Length = 131
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 59/120 (49%), Gaps = 30/120 (25%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPT-- 113
I++ G+ D F + + +G E++++ ++R E + + +L+S ++ + P
Sbjct: 14 ITTQDGYVFDSFIITELNG------ELVEFDRRR-ELEQALTVALQSEKLPALSITPNRQ 66
Query: 114 -----------------EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+EHT +E D+PGL ++V + +L+ N++NA+I T ++A
Sbjct: 67 LQHFTVQTDVRFLHENKKEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKA 126
>gi|398851998|ref|ZP_10608670.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM80]
gi|398245286|gb|EJN30809.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM80]
Length = 900
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRDK------------EVI----DY---IQQRLETDA---SFAPSLRSSV 108
+ V+D +G+ I D E + DY IQ+R+ +FAP + ++
Sbjct: 749 YIVLDNEGESIGDNPTRVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITD-AHN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 866 QPLSDPLLCSRLQDAIVEQL 885
>gi|242240399|ref|YP_002988580.1| PII uridylyl-transferase [Dickeya dadantii Ech703]
gi|242132456|gb|ACS86758.1| UTP-GlnB uridylyltransferase, GlnD [Dickeya dadantii Ech703]
Length = 890
Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats.
Identities = 45/171 (26%), Positives = 74/171 (43%), Gaps = 18/171 (10%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P V+I + T I + S ++ + V L+ NL + A I +S G MD
Sbjct: 693 VNKPLVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 752
Query: 71 FNVIDCDGKKI---RDKEVIDYIQQRLETDASFAPSLR------------SSVGVMPT-- 113
F V++ DG + R + I+Q L P +R + V +PT
Sbjct: 753 FIVLEPDGNPLAPDRHDMIRHAIEQALTQRDYQHPRIRRPSPKLRHFSVPTEVSFLPTHT 812
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
+ + +E D+PGL + V V ADL+ ++ A I T +R + + D
Sbjct: 813 DRRSYMELIALDQPGLLARVGEVFADLNLSLHGARISTIGERVEDLFILAD 863
>gi|159045373|ref|YP_001534167.1| PII uridylyl-transferase [Dinoroseobacter shibae DFL 12]
gi|157913133|gb|ABV94566.1| [Protein-PII] uridylyltransferase [Dinoroseobacter shibae DFL 12]
Length = 943
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++ G+L + + L D N+ + A I++ G +D F V
Sbjct: 850 PTSISFDNEGSEIYTLIEVDTRDRPGLLFDLAKALADANIYVASAQIATYGAQVVDTFYV 909
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ + I++RL
Sbjct: 910 KDMFGLKLHGEAKQRTIEKRL 930
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 82/186 (44%), Gaps = 31/186 (16%)
Query: 6 AKLIRRMNPPRVVIDNNTCADATVIKVD-SVNKH-GILLQVIQVLNDV--NLVIKKAYIS 61
A L+R + +V +D AD V +V ++ H GI ++ L V N+V + Y +
Sbjct: 730 AHLLRGIEDDQVRLDLTLDADRDVTRVSFAMADHPGIFARLAGALALVGANVVDARTYTT 789
Query: 62 SDGGWFMDVFNVIDCDGK-----------KIRDK----EVI--------DYIQQRLETDA 98
DG + F V D DGK K+ DK EV+ D +++R DA
Sbjct: 790 KDG-YVTACFWVQDADGKPYDESRLPRLRKMIDKTLSGEVVTSQALVSKDKVKKR---DA 845
Query: 99 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 158
F S +E +T IE DRPGL ++ LAD + V +A+I T+ +
Sbjct: 846 QFRFPTSISFDNEGSEIYTLIEVDTRDRPGLLFDLAKALADANIYVASAQIATYGAQVVD 905
Query: 159 VVHVTD 164
+V D
Sbjct: 906 TFYVKD 911
>gi|291280233|ref|YP_003497068.1| protein-P-II uridylyltransferase [Deferribacter desulfuricans SSM1]
gi|290754935|dbj|BAI81312.1| protein-P-II uridylyltransferase [Deferribacter desulfuricans SSM1]
Length = 853
Score = 45.4 bits (106), Expect = 0.026, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 44/75 (58%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDC 76
V DN ++ TVI V + +K G+L +++ V D+ + ++KA IS+D +D F V D
Sbjct: 772 VEFDNEISSNYTVIDVFTEDKIGLLYKILSVFEDLGINVQKAKISTDVDRVVDSFYVTDK 831
Query: 77 DGKKIRDKEVIDYIQ 91
+ KI ++ ID I+
Sbjct: 832 NYHKITEQTFIDKIK 846
>gi|419839139|ref|ZP_14362557.1| protein-P-II uridylyltransferase [Haemophilus haemolyticus HK386]
gi|386909850|gb|EIJ74514.1| protein-P-II uridylyltransferase [Haemophilus haemolyticus HK386]
Length = 863
Score = 45.4 bits (106), Expect = 0.026, Method: Composition-based stats.
Identities = 36/145 (24%), Positives = 72/145 (49%), Gaps = 22/145 (15%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDA----SFAPSLRSSVGVMP 112
I++ G+ D F + + +G+ + R +E+ + L+++ S P+ + +
Sbjct: 720 ITAQDGYVFDSFIITELNGELVEFDRRRELEQALTLALQSEKLPALSITPNRQLQHFTVQ 779
Query: 113 TE---------EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT 163
T+ EHT +E D+PGL ++V + ++L+ N++NA+I T ++A +T
Sbjct: 780 TDVRFLHENKKEHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILT 839
Query: 164 DHSTGYAIKDPKRLSTIKELLFNVL 188
+ G A+ +R E+L NVL
Sbjct: 840 NQ-FGQALDSQQR-----EILRNVL 858
>gi|383936728|ref|ZP_09990149.1| [protein-PII] uridylyltransferase [Rheinheimera nanhaiensis E407-8]
gi|383702156|dbj|GAB60240.1| [protein-PII] uridylyltransferase [Rheinheimera nanhaiensis E407-8]
Length = 874
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%)
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 171
P T + D+P LF+ + A L N+ +A+I T+ D A V G A+
Sbjct: 686 PIRGGTQVFIYTKDQPKLFARLVAALDSKKVNIFDAQIMTNKDGYAMDTFVILEQNGEAV 745
Query: 172 KDPKRLSTIKELLFNVLRGYDDFRKAKTSLS 202
P R +IK L + G D + KT LS
Sbjct: 746 NSPSRQQSIKRALELYIAGKPDLSRQKTKLS 776
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 71/170 (41%), Gaps = 21/170 (12%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG- 64
++R NP P V+I T + + + ++ + +++ L+ + I A I ++
Sbjct: 669 ILRHKNPDEPLVLISKAPIRGGTQVFIYTKDQPKLFARLVAALDSKKVNIFDAQIMTNKD 728
Query: 65 GWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSS----------------V 108
G+ MD F +++ +G+ + I++ LE + P L V
Sbjct: 729 GYAMDTFVILEQNGEAVNSPSRQQSIKRALELYIAGKPDLSRQKTKLSRQMRQFNVPPKV 788
Query: 109 GVMP--TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+P T + T IE D PGL + + V N+ A+I T +RA
Sbjct: 789 VFLPGNTSKRTMIELAALDTPGLLANIGEVFQRCDVNIHAAKITTIGERA 838
>gi|374623042|ref|ZP_09695559.1| (Protein-PII) uridylyltransferase [Ectothiorhodospira sp. PHS-1]
gi|373942160|gb|EHQ52705.1| (Protein-PII) uridylyltransferase [Ectothiorhodospira sp. PHS-1]
Length = 898
Score = 45.4 bits (106), Expect = 0.026, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 96 TDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
T SF P +P T + + DRPGL S + VL D V NA+I T ++
Sbjct: 805 TQVSFDP--------LPHHNRTVLSISTADRPGLLSRIGIVLMDCGVKVYNAKIATAGEQ 856
Query: 156 AAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLR 189
A V +VT+ + I+DP+R I + L L+
Sbjct: 857 ADDVFYVTELND-QPIQDPERRQLITDRLREALQ 889
>gi|343518734|ref|ZP_08755723.1| ACT domain protein [Haemophilus pittmaniae HK 85]
gi|343393398|gb|EGV05954.1| ACT domain protein [Haemophilus pittmaniae HK 85]
Length = 124
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 174
EHT +E D+PGL +++ + ADL N+ NA+I T ++A +T+ + G A+
Sbjct: 52 EHTELELVALDKPGLLAQISQIFADLALNLRNAKITTVGEKAEDFFILTN-AQGQALSAE 110
Query: 175 KRLSTIKELLFNVL 188
+R + ++L+ L
Sbjct: 111 ER-QQLADVLYRAL 123
>gi|398782192|ref|ZP_10546010.1| PII uridylyl-transferase [Streptomyces auratus AGR0001]
gi|396996929|gb|EJJ07908.1| PII uridylyl-transferase [Streptomyces auratus AGR0001]
Length = 836
Score = 45.4 bits (106), Expect = 0.028, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV + ATVI+V + + HG+L ++ + L + ++ A+IS+ G +D F V
Sbjct: 752 PPRVSAVTGSSRTATVIEVRAQDAHGLLHRIGRALETAGVAVRSAHISTLGANAVDAFYV 811
Query: 74 IDCDGKKI 81
D DG+ +
Sbjct: 812 TDPDGEPL 819
>gi|423686744|ref|ZP_17661552.1| PII uridylyl-transferase [Vibrio fischeri SR5]
gi|371494812|gb|EHN70410.1| PII uridylyl-transferase [Vibrio fischeri SR5]
Length = 873
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 85/191 (44%), Gaps = 19/191 (9%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVID 75
++I N T I V S ++ + V L+ ++ I A + SS G+ +D F V+D
Sbjct: 681 ILISKNASRGGTEIFVYSKDQPHLFATVAAELDRRSITIYDAQVMSSKDGYALDTFMVLD 740
Query: 76 CDGKKI---RDKEVIDYIQQ-RLETDASFAPSLR-----------SSVGVMPTE--EHTS 118
+ I R + +ID + +L A+ + R + + +PT+ + T
Sbjct: 741 QNDDPIDEERQQRLIDQLYDVKLNDQATHIKTRRPPRQLQHFNVKTRMEFLPTKTGKRTL 800
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
+EF D PGL + V A A L N+ A+I T +RA + +T G + D K+
Sbjct: 801 MEFVALDTPGLLATVGATFAQLGINLHAAKITTIGERAEDLFILTS-DVGGRLDDDKQAE 859
Query: 179 TIKELLFNVLR 189
L+ NV R
Sbjct: 860 LELALVKNVAR 870
>gi|399064503|ref|ZP_10747442.1| (protein-PII) uridylyltransferase [Novosphingobium sp. AP12]
gi|398030747|gb|EJL24152.1| (protein-PII) uridylyltransferase [Novosphingobium sp. AP12]
Length = 917
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 46/85 (54%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV+ DN TV++V+S ++ +L ++ L + L++ A+I++ G D F V
Sbjct: 824 PRVLFDNKASNRFTVVEVNSRDRPALLNRLAHALFESKLMVHSAHIATYGERAADTFYVT 883
Query: 75 DCDGKKIRDKEVIDYIQQRLETDAS 99
D G+K+ + +++RL AS
Sbjct: 884 DLLGEKLTATPRLKALERRLLEAAS 908
>gi|82775557|ref|YP_401904.1| PII uridylyl-transferase [Shigella dysenteriae Sd197]
gi|309787161|ref|ZP_07681773.1| protein-P-II uridylyltransferase [Shigella dysenteriae 1617]
gi|91206756|sp|Q32JU2.1|GLND_SHIDS RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|81239705|gb|ABB60415.1| protein PII [Shigella dysenteriae Sd197]
gi|308924739|gb|EFP70234.1| protein-P-II uridylyltransferase [Shigella dysenteriae 1617]
Length = 890
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + ++ D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLDLIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|398858407|ref|ZP_10614097.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM79]
gi|398239133|gb|EJN24848.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM79]
Length = 900
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 87/200 (43%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVID--------------YIQQRLETDA---SFAPSLRSSV 108
+ V+D DG I D K++ + IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIREGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 866 QPLSDPLLCSRLQDAIVEQL 885
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DNYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D + + + D + +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSRLQ 878
>gi|455651557|gb|EMF30283.1| PII uridylyl-transferase [Streptomyces gancidicus BKS 13-15]
Length = 808
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV + ATVI+V + + G+L ++ + L D + ++ A++S+ G +D F V
Sbjct: 723 PPRVTVAPAASRHATVIEVRAQDAPGLLFRIGRALEDAGVRVRSAHVSTLGANAVDAFYV 782
Query: 74 IDCDGKKIRDKEVIDYIQQRLE 95
G + +E + + ++LE
Sbjct: 783 TQERGVPLPGEEAV-AVARKLE 803
>gi|416895514|ref|ZP_11925415.1| protein-P-II uridylyltransferase [Escherichia coli STEC_7v]
gi|417112331|ref|ZP_11964454.1| protein-P-II uridylyltransferase [Escherichia coli 1.2741]
gi|422802518|ref|ZP_16851011.1| protein-P-II uridylyltransferase [Escherichia coli M863]
gi|323964941|gb|EGB60407.1| protein-P-II uridylyltransferase [Escherichia coli M863]
gi|327255145|gb|EGE66748.1| protein-P-II uridylyltransferase [Escherichia coli STEC_7v]
gi|386143115|gb|EIG84251.1| protein-P-II uridylyltransferase [Escherichia coli 1.2741]
Length = 890
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + +VI + +++ T +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHDVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|197118260|ref|YP_002138687.1| GlnB (protein PII) uridylyltransferase, GlnD [Geobacter
bemidjiensis Bem]
gi|197087620|gb|ACH38891.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter bemidjiensis Bem]
Length = 894
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P RV IDN +D TVI + + +K G+L + L + L I + IS+ DVF V
Sbjct: 808 PARVEIDNEVSSDYTVIDIYAHDKIGLLYGITSTLTRLGLYIGVSKISTKVDQVADVFYV 867
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G+KI + ++ I++ L
Sbjct: 868 KDIFGQKIMNPGKLEEIRKEL 888
>gi|398843542|ref|ZP_10600681.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM102]
gi|398102080|gb|EJL92269.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM102]
Length = 900
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 87/200 (43%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 689 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDT 748
Query: 71 FNVIDCDGKKIRD-----KEVID--------------YIQQRLETDA---SFAPSLRSSV 108
+ V+D DG I D K++ + IQ+R+ +FAP + ++
Sbjct: 749 YIVLDTDGDSIGDNPARVKQIREGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQV--TI 806
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 807 HNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 865
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP S +++ + L
Sbjct: 866 QPLSDPLLCSRLQDAIVEQL 885
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D Y +I+R P P+V I N+ TV+++ + ++ G+L ++ + + +L
Sbjct: 781 DNYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D + + + D + +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSRLQ 878
>gi|427409438|ref|ZP_18899640.1| protein-P-II uridylyltransferase [Sphingobium yanoikuyae ATCC
51230]
gi|425711571|gb|EKU74586.1| protein-P-II uridylyltransferase [Sphingobium yanoikuyae ATCC
51230]
Length = 918
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+IDN TVI+V++ ++ +L + L + + A++++ G +D F V
Sbjct: 824 PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVT 883
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI K + +++RL
Sbjct: 884 DLLGGKIESKARLQTLERRL 903
>gi|217073346|gb|ACJ85032.1| unknown [Medicago truncatula]
Length = 214
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 59/112 (52%), Gaps = 12/112 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+ID ++ DATV+++ ++ G LL + L ++ L + KA + D + F++
Sbjct: 84 PIVIIDQDSDPDATVVEITFGDRLGALLDAMNALKNLGLNVVKASVCLDSSGKHNKFSIT 143
Query: 75 DCD-GKKIRDKEVIDYIQQRL---------ETDASFAPSLRSSVGVMPTEEH 116
D G+K+ D E+++ I+ + E+ A A L ++ G++P +E
Sbjct: 144 KADTGRKVEDPELLEAIRLTILNNMITYHPESSAQLA--LGAAFGLVPPKEQ 193
>gi|381199347|ref|ZP_09906497.1| PII uridylyl-transferase [Sphingobium yanoikuyae XLDN2-5]
Length = 920
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+IDN TVI+V++ ++ +L + L + + A++++ G +D F V
Sbjct: 826 PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVT 885
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI K + +++RL
Sbjct: 886 DLLGGKIESKARLQTLERRL 905
>gi|254510379|ref|ZP_05122446.1| protein-P-II uridylyltransferase [Rhodobacteraceae bacterium KLH11]
gi|221534090|gb|EEE37078.1| protein-P-II uridylyltransferase [Rhodobacteraceae bacterium KLH11]
Length = 919
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 3 DEYAKLIRRMN-PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
D+ K R N P + DN T+I+VD+ ++ G+L + + L D N+ I A I+
Sbjct: 814 DKIKKRERAFNVPTHITFDNEGSEIYTIIEVDTRDRPGLLYDLTRTLADANVYIANAVIA 873
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLET 96
+ G +D F V D G K + + ++ +L T
Sbjct: 874 TYGEQVVDTFYVKDMFGLKYHSESKLRGLEAKLRT 908
Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 23/148 (15%)
Query: 39 GILLQVIQVLNDV--NLVIKKAYISSDGGWFMDVFNVIDCDG---KKIRDKEVIDYIQQR 93
GI ++ L V N+V ++Y + DG + D F V D +G + R + I +
Sbjct: 741 GIFARIAGALALVGANVVDARSYTTKDG-YVTDAFWVQDAEGHPFEAARLPRLTQMIHKT 799
Query: 94 LETDASFAPSLRSSVGV--------MPT---------EEHTSIEFTGTDRPGLFSEVCAV 136
L+ + +L+S + +PT E +T IE DRPGL ++
Sbjct: 800 LKGEVVAREALKSRDKIKKRERAFNVPTHITFDNEGSEIYTIIEVDTRDRPGLLYDLTRT 859
Query: 137 LADLHCNVVNAEIWTHNDRAAAVVHVTD 164
LAD + + NA I T+ ++ +V D
Sbjct: 860 LADANVYIANAVIATYGEQVVDTFYVKD 887
>gi|381405610|ref|ZP_09930294.1| PII uridylyl-transferase [Pantoea sp. Sc1]
gi|380738809|gb|EIB99872.1| PII uridylyl-transferase [Pantoea sp. Sc1]
Length = 884
Score = 45.1 bits (105), Expect = 0.034, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 8 LIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGW 66
L+ + P V++ T I + S ++ + V L+ NL + A I +S G
Sbjct: 682 LVHDLKKPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGM 741
Query: 67 FMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDASFAP-------------SLRSSVGV 110
MD F V++ DG + R +I ++Q + T + + P S+ + V
Sbjct: 742 AMDTFIVLEPDGSPLSPDRHPMIIQALEQAI-TQSQWVPPRTRRPSAKLRHFSVDTEVNF 800
Query: 111 MPT--EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+PT + + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 801 LPTHTDRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGER 847
>gi|378768474|ref|YP_005196947.1| UTP-GlnB uridylyltransferase, GlnD [Pantoea ananatis LMG 5342]
gi|365187960|emb|CCF10910.1| UTP-GlnB uridylyltransferase, GlnD [Pantoea ananatis LMG 5342]
Length = 882
Score = 45.1 bits (105), Expect = 0.034, Method: Composition-based stats.
Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P V++ T I + S ++ + V L+ NL + A I +S G MD
Sbjct: 684 LNQPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 743
Query: 71 FNVIDCDGKKI---RDKEVIDYIQQRLETDASFAPSLR------------SSVGVMPT-- 113
F V++ DG + R +I ++Q + P R + V +PT
Sbjct: 744 FIVLEPDGSPLSPDRHAMIIQALEQAITQREWVPPRTRRQAARLKHFSVDTEVNFLPTHT 803
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 804 DRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGER 845
>gi|386014735|ref|YP_005933012.1| protein-PII uridylyltransferase GlnD [Pantoea ananatis AJ13355]
gi|327392794|dbj|BAK10216.1| protein-PII uridylyltransferase GlnD [Pantoea ananatis AJ13355]
Length = 882
Score = 45.1 bits (105), Expect = 0.034, Method: Composition-based stats.
Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P V++ T I + S ++ + V L+ NL + A I +S G MD
Sbjct: 684 LNQPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 743
Query: 71 FNVIDCDGKKI---RDKEVIDYIQQRLETDASFAPSLR------------SSVGVMPT-- 113
F V++ DG + R +I ++Q + P R + V +PT
Sbjct: 744 FIVLEPDGSPLSPDRHAMIIQALEQAITQREWVPPRTRRQAARLKHFSVDTEVNFLPTHT 803
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 804 DRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGER 845
>gi|86146892|ref|ZP_01065211.1| PII uridylyl-transferase [Vibrio sp. MED222]
gi|85835344|gb|EAQ53483.1| PII uridylyl-transferase [Vibrio sp. MED222]
Length = 873
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 20/181 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS-SDG 64
L+R +P P V+I T + V ++ + V+ L+ N + A + S
Sbjct: 670 LLRLEDPSQPLVLISKKATRGGTEVFVYCKDQAALFATVVAELDRRNFNVHDAQVMVSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRL------ETDASFAP------SLRSSVG 109
G +D F V+D G+ I R K V ++ L + P +++ V
Sbjct: 730 GHVLDTFIVLDQHGEAIDEARHKAVAKHLTHVLADGRPTKIKTRRTPRNLQHFKVKTRVE 789
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ + T +E D PGL ++V A A+L N+ A+I T +RA + +T +
Sbjct: 790 FLPTKSKKRTLMELRALDTPGLLAQVGATFAELDINLHGAKITTIGERAEDLFILTSDAG 849
Query: 168 G 168
G
Sbjct: 850 G 850
>gi|357446731|ref|XP_003593641.1| Phosphorylase [Medicago truncatula]
gi|355482689|gb|AES63892.1| Phosphorylase [Medicago truncatula]
Length = 1055
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%)
Query: 19 IDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDG 78
++N+T ++T + + NK G+L + +V + L I KA + +G +F F V D G
Sbjct: 53 VENSTSDNSTAFLIRARNKIGLLQIITRVFKILGLTIDKATVEFEGDYFTKKFFVTDSHG 112
Query: 79 KKIRDKEVIDYIQQRL 94
KI D E ++ I++ L
Sbjct: 113 NKIEDDENLERIKRAL 128
>gi|291616343|ref|YP_003519085.1| GlnD [Pantoea ananatis LMG 20103]
gi|386080595|ref|YP_005994120.1| protein-PII uridylyltransferase GlnD [Pantoea ananatis PA13]
gi|291151373|gb|ADD75957.1| GlnD [Pantoea ananatis LMG 20103]
gi|354989776|gb|AER33900.1| protein-PII uridylyltransferase GlnD [Pantoea ananatis PA13]
Length = 882
Score = 45.1 bits (105), Expect = 0.036, Method: Composition-based stats.
Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
+N P V++ T I + S ++ + V L+ NL + A I +S G MD
Sbjct: 684 LNQPLVLVSPQATRGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDT 743
Query: 71 FNVIDCDGKKI---RDKEVIDYIQQRLETDASFAPSLR------------SSVGVMPT-- 113
F V++ DG + R +I ++Q + P R + V +PT
Sbjct: 744 FIVLEPDGSPLSPDRHAMIIQALEQAITQREWVPPRTRRQAARLKHFSVDTEVNFLPTHT 803
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 804 DRRSYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGER 845
>gi|197335381|ref|YP_002156792.1| PII uridylyl-transferase [Vibrio fischeri MJ11]
gi|238690251|sp|B5F9X8.1|GLND_VIBFM RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|197316871|gb|ACH66318.1| protein-P-II uridylyltransferase [Vibrio fischeri MJ11]
Length = 873
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 85/191 (44%), Gaps = 19/191 (9%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVID 75
++I N T I V S ++ + V L+ ++ I A + SS G+ +D F V+D
Sbjct: 681 ILISKNASRGGTEIFVYSKDQPHLFATVAAELDRRSITIYDAQVMSSKDGYALDTFMVLD 740
Query: 76 CDGKKI---RDKEVIDYIQQ-RLETDASFAPSLR-----------SSVGVMPTE--EHTS 118
+ I R + +ID + +L A+ + R + + +PT+ + T
Sbjct: 741 QNDDPIDEERQQRLIDQLYDVKLNDQATHIKTRRPPRQLQHFNVKTRMEFLPTKTGKRTL 800
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
+EF D PGL + V A A L N+ A+I T +RA + +T G + D K+
Sbjct: 801 MEFVALDTPGLLATVGATFAQLGINLHAAKITTIGERAEDLFILTS-DVGGRLDDDKQAE 859
Query: 179 TIKELLFNVLR 189
L+ NV R
Sbjct: 860 LEIALVKNVAR 870
>gi|119386663|ref|YP_917718.1| PII uridylyl-transferase [Paracoccus denitrificans PD1222]
gi|119377258|gb|ABL72022.1| metal dependent phosphohydrolase [Paracoccus denitrificans PD1222]
Length = 936
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P V DN TVI+VD+ ++ G+L + + L D ++ I A I++ G +D F V
Sbjct: 834 PTHVTFDNEASDVYTVIEVDTRDRPGLLYDLTRTLADNHIQIASAVIATFGAQVVDTFYV 893
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ + + +++RL
Sbjct: 894 KDMFGLKLHQPQRREALEKRL 914
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 87/212 (41%), Gaps = 26/212 (12%)
Query: 16 RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDV--NLVIKKAYISSDGGWFMDVFNV 73
R + +T DAT + GI ++ L V N+V + Y + DG + VF +
Sbjct: 726 RTDLHPDTDRDATRAAFVLADHPGIFSRMAGALALVGANIVDARTYTTKDG-FATAVFWL 784
Query: 74 IDCDGKKI---RDKEVIDYIQQRLETD----ASFA----PSLRSSVGVMPT--------- 113
D DG R + IQ+ L+ + + A P R + PT
Sbjct: 785 QDADGHPYAADRLPRLRTMIQRTLKGEIVAREALAGRDKPKKREAAFRFPTHVTFDNEAS 844
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
+ +T IE DRPGL ++ LAD H + +A I T + +V D G +
Sbjct: 845 DVYTVIEVDTRDRPGLLYDLTRTLADNHIQIASAVIATFGAQVVDTFYVKD-MFGLKLHQ 903
Query: 174 PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPG 205
P+R +++ L ++ + +A+ + P G
Sbjct: 904 PQRREALEKRLRQAIK--EGVERAERAERPSG 933
>gi|374986229|ref|YP_004961724.1| PII uridylyl-transferase [Streptomyces bingchenggensis BCW-1]
gi|297156881|gb|ADI06593.1| PII uridylyl-transferase [Streptomyces bingchenggensis BCW-1]
Length = 883
Score = 45.1 bits (105), Expect = 0.036, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 5 YAKLIRRMN----PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
Y K RR PPRV + + ATVI+V + + G+L ++ + L D + ++ A++
Sbjct: 785 YRKYPRRRGVHAPPPRVTVAPGSSQLATVIEVRAQDAPGLLHRIGRALEDAGVTVRSAHV 844
Query: 61 SSDGGWFMDVFNVIDCDG---KKIRDKEVIDYIQQRL 94
S+ G +D F V D G + +R EV +++ L
Sbjct: 845 STLGANAVDAFYVTDASGAPLQPMRAAEVAKEVERTL 881
>gi|94500620|ref|ZP_01307150.1| PII uridylyl-transferase [Oceanobacter sp. RED65]
gi|94427175|gb|EAT12155.1| PII uridylyl-transferase [Oceanobacter sp. RED65]
Length = 896
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 81/184 (44%), Gaps = 25/184 (13%)
Query: 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDVFNVIDCDGKKIRDKE 85
AT I + ++ + + L+ ++L I+ A I+S +D + V+D +G I D
Sbjct: 706 ATQIFIYMKDQPHLFAAMTAALDQLHLNIQDARIITSANNNALDTYVVLDENGDSITDPL 765
Query: 86 VIDYIQQRLETDAS---------------------FAPSLRSSVGVMPTEEHTSIEFTGT 124
++ IQ LE S F P+ + + P + T +E
Sbjct: 766 RLEKIQSTLEEALSNPESFPNLIQRRTSRQLKQFEFEPT--AFISNDPYSKRTLLEVIAP 823
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
DRPGL + + + D + ++ A+I T +R + ++TD + G I DP+ +++ +
Sbjct: 824 DRPGLLARMGKLFMDYNLSLETAKIMTEVERIDDIFYITD-ANGDPISDPEFCMELQQAV 882
Query: 185 FNVL 188
N L
Sbjct: 883 VNAL 886
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 47/108 (43%), Gaps = 11/108 (10%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
E T I D+P LF+ + A L LH N+ +A I T + A +V G +I D
Sbjct: 704 EGATQIFIYMKDQPHLFAAMTAALDQLHLNIQDARIITSANNNALDTYVVLDENGDSITD 763
Query: 174 PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNR--ERRLHQIMFD 219
P RL I+ L L + F P ++ R R+L Q F+
Sbjct: 764 PLRLEKIQSTLEEALSNPESF---------PNLIQRRTSRQLKQFEFE 802
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 49/94 (52%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P I N+ + T+++V + ++ G+L ++ ++ D NL ++ A I ++ D+F +
Sbjct: 803 PTAFISNDPYSKRTLLEVIAPDRPGLLARMGKLFMDYNLSLETAKIMTEVERIDDIFYIT 862
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSV 108
D +G I D E +QQ + S L++S+
Sbjct: 863 DANGDPISDPEFCMELQQAVVNALSDQLELQASL 896
>gi|294851544|ref|ZP_06792217.1| protein-P-II uridylyltransferase [Brucella sp. NVSL 07-0026]
gi|294820133|gb|EFG37132.1| protein-P-II uridylyltransferase [Brucella sp. NVSL 07-0026]
Length = 934
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 98 ASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAA 157
+F R + + + T IE G D PGL SE+ +++DL ++ +A I T +++
Sbjct: 828 GAFKVEPRVEINNTLSNKFTVIEVEGLDLPGLLSELTGLISDLSLDIASAHITTFSEKVI 887
Query: 158 AVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+VTD G+ I + R IK L +L
Sbjct: 888 DSFYVTD-LVGHKISNATRQGNIKRKLLALL 917
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
PRV I+N TVI+V+ ++ G+L ++ +++D++L I A+I++ +D F V
Sbjct: 834 PRVEINNTLSNKFTVIEVEGLDLPGLLSELTGLISDLSLDIASAHITTFSEKVIDSFYVT 893
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + I+++L
Sbjct: 894 DLVGHKISNATRQGNIKRKL 913
>gi|218710320|ref|YP_002417941.1| PII uridylyl-transferase [Vibrio splendidus LGP32]
gi|254798834|sp|B7VIS0.1|GLND_VIBSL RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|218323339|emb|CAV19516.1| [Protein-PII] uridylyltransferase [Vibrio splendidus LGP32]
Length = 873
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 20/181 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS-SDG 64
L+R +P P V+I T + V ++ + V+ L+ N + A + S
Sbjct: 670 LLRLEDPSQPLVLISKKATRGGTEVFVYCKDQAALFATVVAELDRRNFNVHDAQVMVSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRL------ETDASFAP------SLRSSVG 109
G +D F V+D G+ I R K V ++ L + P +++ V
Sbjct: 730 GHVLDTFIVLDQHGEAIDEARHKAVAKHLTHVLADGRPTKIKTRRTPRNLQHFKVKTRVE 789
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ + T +E D PGL ++V A A+L N+ A+I T +RA + +T +
Sbjct: 790 FLPTKSKKRTLMELRALDTPGLLAQVGATFAELDINLHGAKITTIGERAEDLFILTSDAG 849
Query: 168 G 168
G
Sbjct: 850 G 850
>gi|356546627|ref|XP_003541726.1| PREDICTED: glycogen phosphorylase 1-like [Glycine max]
Length = 983
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%)
Query: 19 IDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDG 78
+DN+ AD+T + + N+ G+L + +V + L + +A + +G +F+ F V D G
Sbjct: 63 VDNSDSADSTAFVIRARNQIGLLQVITRVFKVLGLTVDRATVEFEGDFFVKTFFVTDSHG 122
Query: 79 KKIRDKEVIDYIQQRL 94
KI D + + I++ L
Sbjct: 123 NKIEDSDSLQRIKRAL 138
>gi|5051976|gb|AAD38384.1|AF152563_1 uridylyl-transferase [Vibrio fischeri ES114]
Length = 873
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 19/191 (9%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVID 75
++I N T I V S ++ + V L+ ++ I A + SS G+ +D F V+D
Sbjct: 681 ILISKNASRGGTEIFVYSKDQPHLFATVAAELDRRSITIYDAQVMSSKDGYALDTFMVLD 740
Query: 76 CDGKKI---RDKEVIDYIQQ-RLETDASFAPSLR-----------SSVGVMPTE--EHTS 118
+ I R + +ID + +L A+ + R + +PT+ + T
Sbjct: 741 QNDDPIDEERQQRLIDQLYDVKLNDQATHIKTRRPPRQLQHFNVKXRMEFLPTKTGKRTL 800
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
+EF D PGL + V A A L N+ A+I T +RA + +T G + D K+
Sbjct: 801 MEFVALDTPGLLATVGATFAQLGINLHAAKITTIGERAEDLFILTS-DVGGRLDDEKQAE 859
Query: 179 TIKELLFNVLR 189
L+ NV R
Sbjct: 860 LELALVKNVAR 870
>gi|423118754|ref|ZP_17106438.1| [protein-PII] uridylyltransferase [Klebsiella oxytoca 10-5246]
gi|376400820|gb|EHT13431.1| [protein-PII] uridylyltransferase [Klebsiella oxytoca 10-5246]
Length = 887
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P +++ + T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 689 LSKPMILLSSQATRGGTEIFIWSPDRPYLFAAVCGELDRRNLSVHDAQIFTTRDGMAMDT 748
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + E+I + ++ T S+ P S+ + V +PT
Sbjct: 749 FIVLEPDGSPLSADRHEMIRHGLEQTITQRSWQPPAPRRQAAKLRHFSVVTEVNFLPTHT 808
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V V ADL+ ++ A I T +R
Sbjct: 809 DRKSFLELIALDQPGLLARVGQVFADLNISLHGARITTIGER 850
>gi|114770139|ref|ZP_01447677.1| PII uridylyl-transferase [Rhodobacterales bacterium HTCC2255]
gi|114548976|gb|EAU51859.1| PII uridylyl-transferase [alpha proteobacterium HTCC2255]
Length = 931
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+I+VD+ ++H +L + + L + N+ I A I++ G +DVF V
Sbjct: 838 PTDITFDNQGSDIYTIIEVDTRDRHSLLFDLTRTLANANIQIASAVIATYGAQAVDVFYV 897
Query: 74 IDCDGKKIRDKEVIDYIQQRLE 95
D G KI + I+ +L+
Sbjct: 898 KDMIGLKITSENKQQIIKGKLQ 919
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 11/109 (10%)
Query: 92 QRLETDASFA-PSLRSSVGVMPTEEH---------TSIEFTGTDRPGLFSEVCAVLADLH 141
Q L+T+ F +L ++G E H T +F D PG+FS + +A +
Sbjct: 707 QGLDTNTQFIFANLFKNLGSKKIESHFEVDQDRDATRAQFVMQDHPGIFSRLTGAIALAN 766
Query: 142 CNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRG 190
NV++A +T +D A V + G D +L +K+L+ L G
Sbjct: 767 ANVIDARTYTTSDGYATPVFWIQDNDGKPF-DFSKLGKLKKLIDQTLAG 814
>gi|302835559|ref|XP_002949341.1| hypothetical protein VOLCADRAFT_89705 [Volvox carteri f.
nagariensis]
gi|300265643|gb|EFJ49834.1| hypothetical protein VOLCADRAFT_89705 [Volvox carteri f.
nagariensis]
Length = 1009
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDC 76
V +DNN+ + TVI V + NK G+L + + D+ + + KA + D D F V
Sbjct: 72 VFVDNNSDTNFTVINVQAANKPGLLTAITALFRDIGVDVGKAVVDGDENKINDTFYVRTL 131
Query: 77 DGKKIRDKEVIDYIQ 91
G K+ D + D ++
Sbjct: 132 TGGKLSDDKAADAVR 146
>gi|88706585|ref|ZP_01104288.1| [Protein-PII] uridylyltransferase [Congregibacter litoralis KT71]
gi|88699081|gb|EAQ96197.1| [Protein-PII] uridylyltransferase [Congregibacter litoralis KT71]
Length = 892
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 25/174 (14%)
Query: 15 PRVVIDN---NTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA--YISSDGGWFMD 69
P V++ N ++ A+ T I + + G + L ++L I A Y SDG +D
Sbjct: 691 PLVLVRNGVESSVANTTQIFIYARFDIGAFSRTCSRLEQLDLSIHDARIYHGSDG-MSLD 749
Query: 70 VFNVIDCDGKKIRDKEVIDYIQQRLE------TDASFAPS-------------LRSSVGV 110
+ V+D G + D E + +I L T+A+F PS +++ +
Sbjct: 750 TYFVLDSSGNAVEDVERLRHITSYLSDKLSPTTNANFIPSRLTPRRVRSFCLATETNMRI 809
Query: 111 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164
P E + +E DRPGL + + V + A+I T +R V VTD
Sbjct: 810 DPVREVSVLEVISLDRPGLLARIGEVFVEFGVICEAAKIQTLGERVEDVFFVTD 863
>gi|333983340|ref|YP_004512550.1| UTP-GlnB uridylyltransferase, GlnD [Methylomonas methanica MC09]
gi|333807381|gb|AEG00051.1| UTP-GlnB uridylyltransferase, GlnD [Methylomonas methanica MC09]
Length = 881
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 22/173 (12%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDVFNV 73
P V++ T + I V + N+ I L+ + L I A I+++ + ++ F V
Sbjct: 685 PLVLLRPQTQRGSAEIFVYTRNEAQIFSICTATLDHLGLTILDARIITTEDQYVLNSFQV 744
Query: 74 IDCDGKKI----RDKEVIDYIQQRL--------------ETDASFAPSLRSSVGVM--PT 113
++ G+ I R+ + D ++Q L A P + +SV + P
Sbjct: 745 LEQSGEAINDLYREIHICDTLRQGLINKKANSSKNIHKQSRQARHFP-IETSVTFLDNPL 803
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 166
+HT+IE TDR GL S + L ++ +A+I T RA + +VTD +
Sbjct: 804 SKHTTIELITTDRAGLLSTIGKAFTKLDIHLHDAKITTIGSRAEDMFYVTDQN 856
>gi|215485328|ref|YP_002327759.1| PII uridylyl-transferase [Escherichia coli O127:H6 str. E2348/69]
gi|419016662|ref|ZP_13563990.1| protein-P-II uridylyltransferase [Escherichia coli DEC1E]
gi|419022252|ref|ZP_13569501.1| protein-P-II uridylyltransferase [Escherichia coli DEC2A]
gi|419032752|ref|ZP_13579853.1| protein-P-II uridylyltransferase [Escherichia coli DEC2D]
gi|254798831|sp|B7UIL2.1|GLND_ECO27 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|215263400|emb|CAS07720.1| uridylyltransferase [Escherichia coli O127:H6 str. E2348/69]
gi|377867869|gb|EHU32623.1| protein-P-II uridylyltransferase [Escherichia coli DEC1E]
gi|377869335|gb|EHU34052.1| protein-P-II uridylyltransferase [Escherichia coli DEC2A]
gi|377884683|gb|EHU49191.1| protein-P-II uridylyltransferase [Escherichia coli DEC2D]
Length = 890
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLIQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|402820021|ref|ZP_10869588.1| hypothetical protein IMCC14465_08220 [alpha proteobacterium
IMCC14465]
gi|402510764|gb|EJW21026.1| hypothetical protein IMCC14465_08220 [alpha proteobacterium
IMCC14465]
Length = 973
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 6 AKLIRRMNPPRVV----IDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS 61
A RR+N ++V IDN+ + +TVI+V +++ G+L + + L ++N+ I A
Sbjct: 846 APFSRRVNAFKLVNNVMIDNDVSSHSTVIEVSGLDRPGLLYALAKTLFNLNVTIVSARAV 905
Query: 62 SDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLE 95
+ G +DVF V D G+K+ K + I L+
Sbjct: 906 TFGERAVDVFYVQDLTGEKVTRKSKLTAIMDSLQ 939
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T IE +G DRPGL + L +L+ +V+A T +RA V +V D TG + +
Sbjct: 872 TVIEVSGLDRPGLLYALAKTLFNLNVTIVSARAVTFGERAVDVFYVQD-LTGEKVTRKSK 930
Query: 177 LSTIKELLFNVLRGYD 192
L+ I + L VL D
Sbjct: 931 LTAIMDSLQMVLTNQD 946
>gi|416334595|ref|ZP_11671428.1| PII uridylyl-transferase [Escherichia coli WV_060327]
gi|432439502|ref|ZP_19681867.1| [protein-PII] uridylyltransferase [Escherichia coli KTE189]
gi|432444625|ref|ZP_19686936.1| [protein-PII] uridylyltransferase [Escherichia coli KTE191]
gi|433012340|ref|ZP_20200729.1| [protein-PII] uridylyltransferase [Escherichia coli KTE104]
gi|433026535|ref|ZP_20214489.1| [protein-PII] uridylyltransferase [Escherichia coli KTE106]
gi|433325052|ref|ZP_20402269.1| PII uridylyl-transferase [Escherichia coli J96]
gi|320196957|gb|EFW71578.1| PII uridylyl-transferase [Escherichia coli WV_060327]
gi|430969910|gb|ELC87003.1| [protein-PII] uridylyltransferase [Escherichia coli KTE189]
gi|430976737|gb|ELC93595.1| [protein-PII] uridylyltransferase [Escherichia coli KTE191]
gi|431527962|gb|ELI04676.1| [protein-PII] uridylyltransferase [Escherichia coli KTE106]
gi|431536909|gb|ELI13065.1| [protein-PII] uridylyltransferase [Escherichia coli KTE104]
gi|432346601|gb|ELL41082.1| PII uridylyl-transferase [Escherichia coli J96]
Length = 890
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLIQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|312966302|ref|ZP_07780528.1| protein-P-II uridylyltransferase [Escherichia coli 2362-75]
gi|417753991|ref|ZP_12402088.1| protein-P-II uridylyltransferase [Escherichia coli DEC2B]
gi|418995194|ref|ZP_13542814.1| protein-P-II uridylyltransferase [Escherichia coli DEC1A]
gi|419000333|ref|ZP_13547899.1| protein-P-II uridylyltransferase [Escherichia coli DEC1B]
gi|419005890|ref|ZP_13553348.1| protein-P-II uridylyltransferase [Escherichia coli DEC1C]
gi|419027145|ref|ZP_13574349.1| protein-P-II uridylyltransferase [Escherichia coli DEC2C]
gi|419037927|ref|ZP_13584990.1| protein-P-II uridylyltransferase [Escherichia coli DEC2E]
gi|312289545|gb|EFR17439.1| protein-P-II uridylyltransferase [Escherichia coli 2362-75]
gi|377850561|gb|EHU15523.1| protein-P-II uridylyltransferase [Escherichia coli DEC1A]
gi|377851631|gb|EHU16576.1| protein-P-II uridylyltransferase [Escherichia coli DEC1C]
gi|377854394|gb|EHU19272.1| protein-P-II uridylyltransferase [Escherichia coli DEC1B]
gi|377880921|gb|EHU45487.1| protein-P-II uridylyltransferase [Escherichia coli DEC2B]
gi|377886381|gb|EHU50863.1| protein-P-II uridylyltransferase [Escherichia coli DEC2C]
gi|377899435|gb|EHU63783.1| protein-P-II uridylyltransferase [Escherichia coli DEC2E]
Length = 890
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLIQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|145637873|ref|ZP_01793519.1| PII uridylyl-transferase [Haemophilus influenzae PittHH]
gi|145268943|gb|EDK08900.1| PII uridylyl-transferase [Haemophilus influenzae PittHH]
Length = 123
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
+EHT +E D+ GL ++V + DL+ N++NA+I T ++A +T+ G A+
Sbjct: 50 KEHTEMELVALDKAGLLAQVSQIFTDLNLNLLNAKITTVGEKAEDFFILTNQ-FGQALDS 108
Query: 174 PKRLSTIKELLFNVL 188
+R E+L NVL
Sbjct: 109 QQR-----EILRNVL 118
>gi|145639126|ref|ZP_01794733.1| PII uridylyl-transferase [Haemophilus influenzae PittII]
gi|145271688|gb|EDK11598.1| PII uridylyl-transferase [Haemophilus influenzae PittII]
gi|309750707|gb|ADO80691.1| PII uridylyl-transferase [Haemophilus influenzae R2866]
Length = 863
Score = 44.7 bits (104), Expect = 0.043, Method: Composition-based stats.
Identities = 36/145 (24%), Positives = 71/145 (48%), Gaps = 22/145 (15%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKI---RDKEVIDYIQQRLETDA----SFAPSLRSSVGVMP 112
I++ G+ D F + + +G+ + R +E+ + L+++ S P+ + +
Sbjct: 720 ITTQDGYVFDSFIITELNGELVEFDRRRELEQALTVALQSEKLPALSITPNRQLQHFTVQ 779
Query: 113 TE---------EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT 163
T+ EHT +E D+PGL ++V + +L+ N++NA+I T ++A +T
Sbjct: 780 TDVRFLHENKKEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILT 839
Query: 164 DHSTGYAIKDPKRLSTIKELLFNVL 188
+ G A+ +R E+L NVL
Sbjct: 840 NQ-FGQALDSQQR-----EILRNVL 858
>gi|336310906|ref|ZP_08565875.1| [Protein-PII] uridylyltransferase [Shewanella sp. HN-41]
gi|335865586|gb|EGM70602.1| [Protein-PII] uridylyltransferase [Shewanella sp. HN-41]
Length = 860
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 91/200 (45%), Gaps = 21/200 (10%)
Query: 10 RRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFM 68
++ + P V++ +T T + V ++ + V+ VL++ N+ + A I +S + +
Sbjct: 657 KQQDEPLVLVSKHTTRGGTELFVYCQDRPKLFATVMAVLDNKNINVHDANIMTSKDNYAL 716
Query: 69 DVFNVIDCDGKKIRDKEVIDYIQQRLE----TDASFAPSLR------------SSVGVMP 112
D F +++ DG+ + I I++ LE +D+ P R + V +
Sbjct: 717 DTFVILEQDGEPVSQLSRIQSIRKALEKALSSDSPKLPRFRKLSRKMKPFNVPTQVSFLE 776
Query: 113 TEEHTS--IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 170
+ H + +E D PGL ++V + + ++ A+I T +RA + + G
Sbjct: 777 SSRHGTSMMELIALDTPGLLAKVGDIFYRCNTTLLAAKITTIGERAEDFFMLQTND-GLQ 835
Query: 171 IKDPKRLSTIKELLFNVLRG 190
+ + + +T++E L + LR
Sbjct: 836 LNETQE-NTLREALISALRA 854
>gi|84394416|ref|ZP_00993133.1| PII uridylyl-transferase [Vibrio splendidus 12B01]
gi|84374949|gb|EAP91879.1| PII uridylyl-transferase [Vibrio splendidus 12B01]
Length = 873
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 20/181 (11%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS-SDG 64
L+R +P P V+I T + V ++ + V+ L+ N + A + S
Sbjct: 670 LLRLEDPSQPLVLISQKATRGGTEVFVYCKDQAALFATVVAELDRRNFNVHDAQVMVSKD 729
Query: 65 GWFMDVFNVIDCDGKKI---RDKEVIDYIQQRL------ETDASFAP------SLRSSVG 109
G +D F V+D G+ I R K V ++ L + P +++ V
Sbjct: 730 GHVLDTFIVLDQHGEAIDEARHKAVAKHLTHVLADGRPTKIKTRRTPRNLQHFKVKTLVE 789
Query: 110 VMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+PT+ + T +E D PGL ++V A A+L N+ A+I T +RA + +T +
Sbjct: 790 FLPTKSKKRTLMELRALDTPGLLAQVGATFAELDINLHGAKITTIGERAEDLFILTSDAG 849
Query: 168 G 168
G
Sbjct: 850 G 850
>gi|419011724|ref|ZP_13559094.1| protein-P-II uridylyltransferase [Escherichia coli DEC1D]
gi|377865258|gb|EHU30050.1| protein-P-II uridylyltransferase [Escherichia coli DEC1D]
Length = 890
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLIQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|70728556|ref|YP_258305.1| PII uridylyl-transferase [Pseudomonas protegens Pf-5]
gi|81170625|sp|Q4KHH8.1|GLND_PSEF5 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|68342855|gb|AAY90461.1| protein-P-II uridylyltransferase [Pseudomonas protegens Pf-5]
Length = 900
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 83/186 (44%), Gaps = 28/186 (15%)
Query: 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDVFNVIDCDGKKI-RDK 84
T I + + ++H + ++ +NL I A I + F +D + V+D DG+ I +
Sbjct: 704 GTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDNDGESIGNNP 763
Query: 85 EVIDYIQQRLETDA----------------------SFAPSLRSSVGVMPTEEHTSIEFT 122
+ ++ I++ L TDA +FAP + ++ T +E +
Sbjct: 764 QRVEQIRKGL-TDALRNPDDYPTIIQRRVPRQLKHFAFAPEV--TIHNDAQRPVTVLELS 820
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
DRPGL + + + + ++ NA+I T +R V +TD + + DP+ S +++
Sbjct: 821 APDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-AHNQPLSDPQLCSRLQD 879
Query: 183 LLFNVL 188
+ L
Sbjct: 880 AIVEQL 885
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 781 DDYPTIIQRRVPRQLKHFAFAPEVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDL 840
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91
++ A I++ G DVF + D + + D ++ +Q
Sbjct: 841 SLQNAKIATLGERVEDVFFITDAHNQPLSDPQLCSRLQ 878
>gi|331661238|ref|ZP_08362170.1| protein-P-II uridylyltransferase [Escherichia coli TA206]
gi|415837508|ref|ZP_11519582.1| protein-P-II uridylyltransferase [Escherichia coli RN587/1]
gi|417284779|ref|ZP_12072074.1| protein-P-II uridylyltransferase [Escherichia coli 3003]
gi|422367557|ref|ZP_16447992.1| protein-P-II uridylyltransferase [Escherichia coli MS 16-3]
gi|425276040|ref|ZP_18667395.1| protein-P-II uridylyltransferase [Escherichia coli ARS4.2123]
gi|432896838|ref|ZP_20107932.1| [protein-PII] uridylyltransferase [Escherichia coli KTE192]
gi|433027185|ref|ZP_20215065.1| [protein-PII] uridylyltransferase [Escherichia coli KTE109]
gi|315300706|gb|EFU59933.1| protein-P-II uridylyltransferase [Escherichia coli MS 16-3]
gi|323190434|gb|EFZ75709.1| protein-P-II uridylyltransferase [Escherichia coli RN587/1]
gi|331052280|gb|EGI24319.1| protein-P-II uridylyltransferase [Escherichia coli TA206]
gi|386242988|gb|EII84723.1| protein-P-II uridylyltransferase [Escherichia coli 3003]
gi|408207591|gb|EKI32312.1| protein-P-II uridylyltransferase [Escherichia coli ARS4.2123]
gi|431430982|gb|ELH12761.1| [protein-PII] uridylyltransferase [Escherichia coli KTE192]
gi|431546902|gb|ELI21289.1| [protein-PII] uridylyltransferase [Escherichia coli KTE109]
Length = 890
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGSPLSADRHEVIRFGLEQVLIQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|224054817|ref|XP_002298369.1| predicted protein [Populus trichocarpa]
gi|222845627|gb|EEE83174.1| predicted protein [Populus trichocarpa]
Length = 417
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 9/146 (6%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS--SDGGWFMDVFNVI 74
V+IDN+ T+++V V+ G+L V++ L D N+ I S ++G +D+F +
Sbjct: 237 VMIDNSLSPAHTLLQVHCVDHKGLLYDVMRTLKDCNIQIAYGRFSLVTNGHRDLDLF-IQ 295
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFS 131
DGKKI D E + RL+ + P P E +E +G RP +F
Sbjct: 296 QKDGKKIVDPEKQSALCFRLKVEM-LHPLRVVIANRGPDTELLVANPVELSGKGRPRVFY 354
Query: 132 EVCAVLADLHCNVVNAEI--WTHNDR 155
++ L L + +AEI ++ +DR
Sbjct: 355 DITHALKALGICIFSAEIGRYSTSDR 380
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 63/147 (42%), Gaps = 16/147 (10%)
Query: 25 ADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDK 84
D VI V+ +K G+ + V+ D L I K +S+DG W V V+ IR
Sbjct: 18 GDPHVITVNCPDKTGLACDIFHVILDYGLYITKGDVSTDGKWCYIVLWVVPHSRSIIR-- 75
Query: 85 EVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTS------IEFTGTDRPGLFSEVCAVLA 138
+++ RL S PS SV ++ + ++F DR GL +V VL
Sbjct: 76 --WTHLKNRL---LSVCPS--CSVSFYWNQQQSKSCPVYLLKFFSLDRKGLLHDVNQVLC 128
Query: 139 DLHCNVVNAEIWTHND-RAAAVVHVTD 164
+L + ++ T D R + VTD
Sbjct: 129 ELELTIQRVKVTTTPDGRVLDLFFVTD 155
>gi|148264430|ref|YP_001231136.1| metal dependent phosphohydrolase [Geobacter uraniireducens Rf4]
gi|146397930|gb|ABQ26563.1| metal dependent phosphohydrolase [Geobacter uraniireducens Rf4]
Length = 898
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P RV IDN AD TVI + + +K G+L ++ L ++ L I + +S+ DVF V
Sbjct: 810 PTRVEIDNEVSADYTVIDIYTHDKVGLLYRITSTLTELGLYIGVSKVSTKVDQVADVFYV 869
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ + ++ I+ L
Sbjct: 870 KDIFGHKLLGGDKLEEIRIHL 890
>gi|422645648|ref|ZP_16708783.1| PII uridylyl-transferase [Pseudomonas syringae pv. maculicola str.
ES4326]
gi|330959197|gb|EGH59457.1| PII uridylyl-transferase [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 898
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 84/200 (42%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 688 PLVLIKETTYREFDGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 747
Query: 71 FNVIDCDGKKI-----RDKEVIDYIQQRLET-----------------DASFAPSLRSSV 108
+ V+D +G I R +++ D + + L +FAP + ++
Sbjct: 748 YIVLDHEGGSIGNNPERIQDIRDGLTEALHNPDDYPTIIKRRVPRQLKHFAFAPQV--TI 805
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E DRPGL + V + + ++ NA+I T +R V +TD +
Sbjct: 806 HNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 864
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP+ S ++E + L
Sbjct: 865 QPLSDPQLCSQLQEAIVKQL 884
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 56/109 (51%), Gaps = 9/109 (8%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L +V ++ + +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDL 839
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAP 102
++ A I++ G DVF + D + + + D ++ +Q+ + S P
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSQLQEAIVKQLSVNP 888
>gi|297827181|ref|XP_002881473.1| hypothetical protein ARALYDRAFT_482665 [Arabidopsis lyrata subsp.
lyrata]
gi|297327312|gb|EFH57732.1| hypothetical protein ARALYDRAFT_482665 [Arabidopsis lyrata subsp.
lyrata]
Length = 411
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 18/186 (9%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG--WFMDVFNVI 74
+ +DN + T+I + + G+L +++ D N+ I + G +D+F ++
Sbjct: 234 ITVDNLLSSAHTLIHITCQDHKGLLYDIMRTFKDFNIQISYGRFTIKRGRNCEIDLF-IV 292
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVM---PTEE---HTSIEFTGTDRPG 128
DG+KI D ++ + RL A LR V +M P E +E +G RP
Sbjct: 293 QSDGRKILDSSKLNALITRLR--AELQQPLR--VVMMNRGPDTELLVTNPVELSGKGRPQ 348
Query: 129 LFSEVCAVLADLHCNVVNAEIWTH--NDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFN 186
+F ++ L ++ + +AEI H DR V V + ++ P+ S I+E ++N
Sbjct: 349 VFHDIALALKKINTCIFSAEIGRHVTGDREWEVYKVLINEED-SLPIPR--SKIEEEVWN 405
Query: 187 VLRGYD 192
L G++
Sbjct: 406 TLMGWE 411
>gi|85710052|ref|ZP_01041117.1| PII uridylyl-transferase [Erythrobacter sp. NAP1]
gi|85688762|gb|EAQ28766.1| PII uridylyl-transferase [Erythrobacter sp. NAP1]
Length = 924
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P+V DN+ TVI+V + ++ +L ++ L NL+++ A+I++ G D F V
Sbjct: 830 PQVNFDNSASNHFTVIEVTARDRPALLNRLAHALYKANLIVQSAHITAYGESAADTFYVT 889
Query: 75 DCDGKKIRDKEVIDYIQQRLETDAS 99
D G K+ E + I+ L AS
Sbjct: 890 DLTGSKVTAPERLAEIEASLLDAAS 914
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 23/183 (12%)
Query: 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVIDCDGKKIRDKE 85
AT++ V + + G+ ++ ++ I A I ++ G+ +D F V D K R++
Sbjct: 731 ATLVSVIAADHPGLFYRIAGGIHLAGANIIDARIHTALNGYAIDNFLVQDLHAKPFREET 790
Query: 86 VIDYIQQ----RLETDASFAPSLRS---------SVGVMP--------TEEHTSIEFTGT 124
I ++Q L P L + + V P + T IE T
Sbjct: 791 QIARLKQGIRDALLAQVELVPKLAARPLAHSRAKAFAVAPQVNFDNSASNHFTVIEVTAR 850
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184
DRP L + + L + V +A I + + AA +VTD TG + P+RL+ I+ L
Sbjct: 851 DRPALLNRLAHALYKANLIVQSAHITAYGESAADTFYVTD-LTGSKVTAPERLAEIEASL 909
Query: 185 FNV 187
+
Sbjct: 910 LDA 912
>gi|289626037|ref|ZP_06458991.1| PII uridylyl-transferase [Pseudomonas syringae pv. aesculi str.
NCPPB 3681]
gi|289651446|ref|ZP_06482789.1| PII uridylyl-transferase [Pseudomonas syringae pv. aesculi str.
2250]
gi|422582741|ref|ZP_16657874.1| PII uridylyl-transferase [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|298157152|gb|EFH98240.1| [Protein-PII] uridylyltransferase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|330867581|gb|EGH02290.1| PII uridylyl-transferase [Pseudomonas syringae pv. aesculi str.
0893_23]
Length = 898
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 90/210 (42%), Gaps = 36/210 (17%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 747
Query: 71 FNVIDCDGKKIRDK-EVIDYIQQRLETDA----------------------SFAPSLRSS 107
+ V+D +G I D E + I+ L T+A +FAP + +
Sbjct: 748 YIVLDNEGGSIGDNPERVQEIRNGL-TEALRNPDDYPTIIKRRVPRQLKHFAFAPQV--T 804
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+ T +E DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 805 IHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-AN 863
Query: 168 GYAIKDPKRLST-----IKELLFNVLRGYD 192
+ + DP+ S +K+L N G+D
Sbjct: 864 NHPLSDPQLCSQLQDAIVKQLSVNSEPGHD 893
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 839
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ----QRLETDASFAPSLRSSV 108
++ A I++ G DVF + D + + D ++ +Q ++L ++ LR S+
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQLQDAIVKQLSVNSEPGHDLRISI 898
>gi|94496584|ref|ZP_01303160.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Sphingomonas sp.
SKA58]
gi|94423944|gb|EAT08969.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Sphingomonas sp.
SKA58]
Length = 920
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+IDN TVI+V++ ++ +L + L + + A++++ G +D F +
Sbjct: 826 PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYIT 885
Query: 75 DCDGKKIRDKEVIDYIQQRLETDAS 99
D G KI K + +++RL A
Sbjct: 886 DLIGGKIESKARLQTLERRLLAAAG 910
>gi|71735709|ref|YP_275980.1| PII uridylyl-transferase [Pseudomonas syringae pv. phaseolicola
1448A]
gi|416025723|ref|ZP_11569371.1| PII uridylyl-transferase [Pseudomonas syringae pv. glycinea str.
race 4]
gi|91206748|sp|Q48F57.1|GLND_PSE14 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|71556262|gb|AAZ35473.1| protein-P-II uridylyltransferase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320329606|gb|EFW85595.1| PII uridylyl-transferase [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 898
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 90/210 (42%), Gaps = 36/210 (17%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 747
Query: 71 FNVIDCDGKKIRDK-EVIDYIQQRLETDA----------------------SFAPSLRSS 107
+ V+D +G I D E + I+ L T+A +FAP + +
Sbjct: 748 YIVLDNEGGSIGDNPERVQEIRNGL-TEALRNPDDYPTIIKRRVPRQLKHFAFAPQV--T 804
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+ T +E DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 805 IHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-AN 863
Query: 168 GYAIKDPKRLST-----IKELLFNVLRGYD 192
+ + DP+ S +K+L N G+D
Sbjct: 864 NHPLSDPQLCSQLQDAIVKQLSVNSEPGHD 893
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 839
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ----QRLETDASFAPSLRSSV 108
++ A I++ G DVF + D + + D ++ +Q ++L ++ LR S+
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQLQDAIVKQLSVNSEPGHDLRISI 898
>gi|408376881|ref|ZP_11174484.1| PII uridylyl-transferase [Agrobacterium albertimagni AOL15]
gi|407748840|gb|EKF60353.1| PII uridylyl-transferase [Agrobacterium albertimagni AOL15]
Length = 941
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I N TVI+V+ +++ G+L ++ VL+D++L I A I++ G +D F V
Sbjct: 827 PDVRISNALSNKFTVIEVECLDRIGLLAEITAVLSDLSLDIHSARITTFGEKVIDTFYVT 886
Query: 75 DCDGKKIRDKEVIDYIQQRLE 95
D G+K+ ++ I RL+
Sbjct: 887 DLVGQKVTNENRQVNIANRLK 907
>gi|432659433|ref|ZP_19895098.1| [protein-PII] uridylyltransferase [Escherichia coli KTE111]
gi|431204255|gb|ELF02828.1| [protein-PII] uridylyltransferase [Escherichia coli KTE111]
Length = 890
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P V++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 692 LSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 751
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + EVI + +++ +S+ P ++ + V +PT
Sbjct: 752 FIVLEPDGNPLSADRHEVIRFGLEQVLKQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHT 811
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V + ADL ++ A I T +R
Sbjct: 812 DRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|115461707|ref|NP_001054453.1| Os05g0113000 [Oryza sativa Japonica Group]
gi|45680438|gb|AAS75239.1| unknown protein [Oryza sativa Japonica Group]
gi|113578004|dbj|BAF16367.1| Os05g0113000 [Oryza sativa Japonica Group]
gi|215695065|dbj|BAG90256.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 458
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 67/151 (44%), Gaps = 5/151 (3%)
Query: 9 IRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFM 68
++R+ + DN T+++++ ++ G+L +++ + D ++ + SD F
Sbjct: 253 MKRVQKATINFDNTLSPAHTLLQINCADQKGLLYDILRTMKDCSIQVTYGRFWSDKKGFR 312
Query: 69 DV-FNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGT 124
+V + DGKKI D E D + RL ++ P V P E +E +G
Sbjct: 313 EVDLFIKQADGKKIIDPEKQDVLSSRLRSEM-LHPLRVMIVNRGPDVELLVANPVELSGK 371
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
RP +F + L L + + I +++R
Sbjct: 372 GRPRVFYDATFALKALGICIFSVRITEYSER 402
>gi|302770887|ref|XP_002968862.1| hypothetical protein SELMODRAFT_270752 [Selaginella moellendorffii]
gi|300163367|gb|EFJ29978.1| hypothetical protein SELMODRAFT_270752 [Selaginella moellendorffii]
Length = 406
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 9/146 (6%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS----SDGGWFMDV 70
PRV ID+ T++++ ++ G+L ++VL D N + +S G +D+
Sbjct: 226 PRVTIDDLLSPAHTLLQISCRDRKGLLYDCLRVLKDFNYQVAYGRLSMSTIDKGRGEIDL 285
Query: 71 FNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRP 127
F + DG+K+ D E + +R+ D + P + + P E T IE +G RP
Sbjct: 286 F-ITQADGRKLVDPEKQKALCERVVRDVA-NPLWVTVLPRGPDSELFVATPIELSGKGRP 343
Query: 128 GLFSEVCAVLADLHCNVVNAEIWTHN 153
+ +V L L + A+I H
Sbjct: 344 RVLYDVTLALKMLDVCIFQADIGRHT 369
>gi|118579771|ref|YP_901021.1| UTP-GlnB uridylyltransferase GlnD [Pelobacter propionicus DSM 2379]
gi|118502481|gb|ABK98963.1| UTP-GlnB uridylyltransferase, GlnD [Pelobacter propionicus DSM
2379]
Length = 905
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P R+ DN TVI + + +K G+L + L + L I + IS+ DVF V
Sbjct: 817 PTRIDFDNQVSEGYTVIDIYTHDKVGLLYLITSTLTQLGLYIGVSKISTKVDQVADVFYV 876
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G KI D+ ++ +++RL++
Sbjct: 877 RDIFGHKIMDEAKLESVRERLKS 899
>gi|302784674|ref|XP_002974109.1| hypothetical protein SELMODRAFT_173843 [Selaginella moellendorffii]
gi|300158441|gb|EFJ25064.1| hypothetical protein SELMODRAFT_173843 [Selaginella moellendorffii]
Length = 406
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 9/145 (6%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS----SDGGWFMDV 70
PRV ID+ T++++ ++ G+L ++VL D N + +S G +D+
Sbjct: 226 PRVTIDDLLSPAHTLLQISCRDRKGLLYDCLRVLKDFNYQVAYGRLSMSTIDKGRGEIDL 285
Query: 71 FNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRP 127
F + DG+K+ D E + +R+ D + P + + P E T IE +G RP
Sbjct: 286 F-ITQADGRKLVDPEKQKALCERVVRDVA-NPLWVTVLPRGPDSELFVATPIELSGKGRP 343
Query: 128 GLFSEVCAVLADLHCNVVNAEIWTH 152
+ +V L L + A+I H
Sbjct: 344 RVLYDVTLALKMLDVCIFQADIGRH 368
>gi|261856728|ref|YP_003264011.1| UTP-GlnB uridylyltransferase, GlnD [Halothiobacillus neapolitanus
c2]
gi|261837197|gb|ACX96964.1| UTP-GlnB uridylyltransferase, GlnD [Halothiobacillus neapolitanus
c2]
Length = 863
Score = 44.3 bits (103), Expect = 0.050, Method: Composition-based stats.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 29/197 (14%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS--------DGGW 66
P + I N DA I V + N HG +++ L+ L ++ A ++ +
Sbjct: 661 PVLWISNTPDQDAIQILVLTENSHGQFARIVTELDRSGLNVQSANMTVITPTAAHLEKRA 720
Query: 67 FMDVFNVIDCDGKKIRDKEVIDYIQQRLE-----TDASF------APSLRSSVGVMPT-- 113
+ F + +G ++ D +D ++ RL TDA+ +P +S+ V
Sbjct: 721 LFEFFILDQHNGARL-DHWSLDMLRTRLRDRLQSTDAARTRIHRRSPPQLASIDVATQIQ 779
Query: 114 --EEH----TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+H T I+ DRPGL +++ ADL ++ +A + T +R +V +
Sbjct: 780 FLSDHRRGRTEIQIITKDRPGLLADITTAFADLDISLNHARVSTLGERVEDAFYVVERQ- 838
Query: 168 GYAIKDPKRLSTIKELL 184
G+A+ PKR + I+ L
Sbjct: 839 GHAVDSPKRCAEIEAAL 855
>gi|419955546|ref|ZP_14471672.1| PII uridylyl-transferase, partial [Pseudomonas stutzeri TS44]
gi|387967587|gb|EIK51886.1| PII uridylyl-transferase, partial [Pseudomonas stutzeri TS44]
Length = 114
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 43/73 (58%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PP+V I N+T T+I++ + ++ G+L +V Q+ +L ++ A I++ G DVF V
Sbjct: 15 PPQVTIHNDTQRPQTIIEIIAPDRPGLLARVGQLFLAFDLSVQNAKIATLGERVEDVFFV 74
Query: 74 IDCDGKKIRDKEV 86
+ D + + D ++
Sbjct: 75 TNADNQPLSDPQL 87
>gi|422594799|ref|ZP_16669089.1| PII uridylyl-transferase [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|330985106|gb|EGH83209.1| PII uridylyl-transferase [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 898
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 90/210 (42%), Gaps = 36/210 (17%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 747
Query: 71 FNVIDCDGKKIRDK-EVIDYIQQRLETDA----------------------SFAPSLRSS 107
+ V+D +G I D E + I+ L T+A +FAP + +
Sbjct: 748 YIVLDNEGGSIGDNPERVQEIRNGL-TEALRNPDDYPTIIKRRVPRQLKHFAFAPQV--T 804
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+ T +E DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 805 IHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-AN 863
Query: 168 GYAIKDPKRLST-----IKELLFNVLRGYD 192
+ + DP+ S +K+L N G+D
Sbjct: 864 NHPLSDPQLCSQLQDAIVKQLSVNSEPGHD 893
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 839
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ----QRLETDASFAPSLRSSV 108
++ A I++ G DVF + D + + D ++ +Q ++L ++ LR S+
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQLQDAIVKQLSVNSEPGHDLRISI 898
>gi|119774274|ref|YP_927014.1| PII uridylyl-transferase [Shewanella amazonensis SB2B]
gi|119766774|gb|ABL99344.1| (Protein-PII) uridylyltransferase [Shewanella amazonensis SB2B]
Length = 856
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 21/200 (10%)
Query: 8 LIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGW 66
L R + P V+I +T T + V +K + V+ VL++ N+ + A + +S +
Sbjct: 654 LKHRQDEPLVLISKHTTRGGTELFVYCRDKPKLFATVMAVLDNKNINVHDATVMTSKDNY 713
Query: 67 FMDVFNVIDCDGKKIRDKEVIDYIQQRLETD-ASFAP---------------SLRSSVGV 110
+D F +++ DG+ + I I++ LE AS P ++ + V
Sbjct: 714 ALDSFVILEQDGEPLMQLSRIQSIRKGLEKALASENPRPTKFRKLSRKMKPFNVPTQVSF 773
Query: 111 MPTEEHTS--IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
+P H + +E D PGL + V + ++ A+I T +RA V + G
Sbjct: 774 LPGSRHGTSMMELIALDMPGLLARVGDIFYRCEITLLAAKITTIGERAEDFF-VLQTNDG 832
Query: 169 YAIKDPKRLSTIKELLFNVL 188
A+ D ++ +KE L + L
Sbjct: 833 QALSDEEQ-RRLKEALVSAL 851
>gi|416018072|ref|ZP_11565073.1| PII uridylyl-transferase [Pseudomonas syringae pv. glycinea str.
B076]
gi|320323122|gb|EFW79211.1| PII uridylyl-transferase [Pseudomonas syringae pv. glycinea str.
B076]
Length = 898
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 89/209 (42%), Gaps = 34/209 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 747
Query: 71 FNVIDCDGKKI-----RDKEVIDYIQQRLET-----------------DASFAPSLRSSV 108
+ V+D +G I R +E+ + + + L +FAP + ++
Sbjct: 748 YIVLDNEGGSIGDNPERAQEIRNGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQV--TI 805
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 806 HNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 864
Query: 169 YAIKDPKRLST-----IKELLFNVLRGYD 192
+ + DP+ S +K+L N G+D
Sbjct: 865 HPLSDPQLCSQLQDAIVKQLSVNSEPGHD 893
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 839
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ----QRLETDASFAPSLRSSV 108
++ A I++ G DVF + D + + D ++ +Q ++L ++ LR S+
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQLQDAIVKQLSVNSEPGHDLRISI 898
>gi|262196341|ref|YP_003267550.1| UTP-GlnB uridylyltransferase, GlnD [Haliangium ochraceum DSM 14365]
gi|262079688|gb|ACY15657.1| UTP-GlnB uridylyltransferase, GlnD [Haliangium ochraceum DSM 14365]
Length = 916
Score = 44.3 bits (103), Expect = 0.056, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDC 76
+ IDN+ ADATVI V + ++ G+L + + L+D L I + +S+ G D+F V+
Sbjct: 831 IRIDNSASADATVIDVLTQDRVGVLHAISRTLSDFGLDIHLSKVSTQGEQVADIFYVVST 890
Query: 77 DG-KKIRDKEVIDYIQQRLE 95
+K+ D I ++ RL+
Sbjct: 891 STQRKLEDDSAIADLELRLQ 910
>gi|424815079|ref|ZP_18240230.1| PII uridylyl-transferase [Escherichia fergusonii ECD227]
gi|325496099|gb|EGC93958.1| PII uridylyl-transferase [Escherichia fergusonii ECD227]
Length = 890
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 18/157 (11%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVID 75
V++ + T I + S ++ + V L+ NL + A I ++ G MD F V++
Sbjct: 697 VLLSPHATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLE 756
Query: 76 CDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT--EEHTS 118
DG + EVI + +++ T +S+ P ++ + V +PT + +
Sbjct: 757 PDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHTDRKSF 816
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+E D+PGL + V + ADL ++ A I T +R
Sbjct: 817 LELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|297202641|ref|ZP_06920038.1| PII uridylyl-transferase [Streptomyces sviceus ATCC 29083]
gi|297148159|gb|EDY57250.2| PII uridylyl-transferase [Streptomyces sviceus ATCC 29083]
Length = 292
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P RV + ATVI+V + + G+L ++ + L D + ++ A++S+ G +D F V
Sbjct: 207 PARVTVAGAASRHATVIEVRAQDAPGLLFRIGRALEDAGVRMRSAHVSTLGANAVDAFYV 266
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
D G + E ++ ET
Sbjct: 267 TDGKGAPLGAGEAASVARKLEET 289
>gi|224100951|ref|XP_002312081.1| predicted protein [Populus trichocarpa]
gi|222851901|gb|EEE89448.1| predicted protein [Populus trichocarpa]
Length = 421
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 10/149 (6%)
Query: 13 NPPR---VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD--GGWF 67
PP+ V +DN T++++ V++ G+ +++ D+N+ + SS G
Sbjct: 234 TPPKKAIVTVDNLLSPAHTLLQIQCVDQKGLFYDILRTSKDLNIQVAYGRFSSSIKGYHN 293
Query: 68 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGT 124
MD+ + DGKKI D E++ RL+ + P P E +E G
Sbjct: 294 MDLL-IRQTDGKKIVDPELLANTCSRLKEEM-LHPLRVIITNRGPDTELLVANPVELCGK 351
Query: 125 DRPGLFSEVCAVLADLHCNVVNAEIWTHN 153
RP +F +V L L + +AEI H+
Sbjct: 352 GRPRVFYDVTLTLKKLGICIFSAEIGRHS 380
>gi|449449320|ref|XP_004142413.1| PREDICTED: uncharacterized protein LOC101203151 [Cucumis sativus]
gi|449487252|ref|XP_004157538.1| PREDICTED: uncharacterized protein LOC101230856 [Cucumis sativus]
Length = 412
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 7/141 (4%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIK--KAYISSDGGWFMDVFNVI 74
V IDN+ TVI++ ++ G++ +++ L D N+ + + +++S G +++F +
Sbjct: 236 VSIDNSISRSHTVIQLLCLDHKGLMYDIMRTLKDYNIQVSYGRFHLNSKGKCDIELFT-M 294
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFS 131
DG KI D + + RL + + P + V P E +E +G RP +F
Sbjct: 295 QSDGCKIVDPNKKNALCSRLRMELT-RPLRAAVVSRGPDTELLVANPVELSGRGRPLVFH 353
Query: 132 EVCAVLADLHCNVVNAEIWTH 152
++ L L+ ++ + EI H
Sbjct: 354 DITLALKQLNMSIFSVEIGRH 374
>gi|384253079|gb|EIE26554.1| starch phosphorylase [Coccomyxa subellipsoidea C-169]
Length = 963
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDC 76
V IDN +D TV+ + N+ G+L + D+ L + KA + G +D F +
Sbjct: 24 VSIDNAQDSDFTVVTISGFNRPGLLTSISGTFRDLGLDVGKAEVDGSNGRVLDKFFITAL 83
Query: 77 DGKKIRDKEVIDYIQQRLE 95
G K+ D + ID ++ LE
Sbjct: 84 GGGKVTDPKDIDKLRASLE 102
>gi|373468040|ref|ZP_09559325.1| protein-P-II uridylyltransferase [Haemophilus sp. oral taxon 851
str. F0397]
gi|371756913|gb|EHO45715.1| protein-P-II uridylyltransferase [Haemophilus sp. oral taxon 851
str. F0397]
Length = 863
Score = 44.3 bits (103), Expect = 0.059, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 74/152 (48%), Gaps = 36/152 (23%)
Query: 60 ISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPT-- 113
I++ G+ D F + + +G E++++ ++R E + + SL+S ++ + P
Sbjct: 720 ITTQDGYVFDSFIITEFNG------ELVEFDRRR-ELEQALTVSLQSEKLPALSITPNRQ 772
Query: 114 -----------------EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+EHT +E D+PG+ ++V + ++L+ N++NA+I T ++A
Sbjct: 773 LQHFTVQTDVRFLHENKKEHTEMELVALDKPGVLAQVSQIFSELNLNLLNAKITTVGEKA 832
Query: 157 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
+T+ G A+ +R E+L NVL
Sbjct: 833 EDFFILTNQ-FGQALDSQQR-----EILRNVL 858
>gi|218547622|ref|YP_002381413.1| PII uridylyl-transferase [Escherichia fergusonii ATCC 35469]
gi|226723945|sp|B7LWA6.1|GLND_ESCF3 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|218355163|emb|CAQ87770.1| uridylyltransferase [Escherichia fergusonii ATCC 35469]
Length = 890
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 18/157 (11%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVID 75
V++ + T I + S ++ + V L+ NL + A I ++ G MD F V++
Sbjct: 697 VLLSPHATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLE 756
Query: 76 CDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT--EEHTS 118
DG + EVI + +++ T +S+ P ++ + V +PT + +
Sbjct: 757 PDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHTDRKSF 816
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+E D+PGL + V + ADL ++ A I T +R
Sbjct: 817 LELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|407799900|ref|ZP_11146768.1| PII uridylyl-transferase [Oceaniovalibus guishaninsula JLT2003]
gi|407057892|gb|EKE43860.1| PII uridylyl-transferase [Oceaniovalibus guishaninsula JLT2003]
Length = 930
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 176
T I F +D PG+FS + LA + NVV+A +T D A V G+ DP +
Sbjct: 740 TRICFALSDHPGIFSRLAGALALVGANVVDARTYTSKDGYATAVFWVQDGDGHPY-DPHK 798
Query: 177 LSTIKELLFNVLRG 190
L ++ + +LRG
Sbjct: 799 LPRLRGTIGKILRG 812
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+++VD+ ++ G+L + + L ++ I A I++ G +D F V
Sbjct: 836 PTSIAFDNEGSEIYTIVEVDTRDRPGLLYDLTRTLAIAHISISSAVIATYGAQVVDTFYV 895
Query: 74 IDCDGKKI 81
D G KI
Sbjct: 896 KDMFGLKI 903
>gi|422806611|ref|ZP_16855042.1| protein-P-II uridylyltransferase [Escherichia fergusonii B253]
gi|324112422|gb|EGC06399.1| protein-P-II uridylyltransferase [Escherichia fergusonii B253]
Length = 890
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 18/157 (11%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVID 75
V++ + T I + S ++ + V L+ NL + A I ++ G MD F V++
Sbjct: 697 VLLSPHATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLE 756
Query: 76 CDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT--EEHTS 118
DG + EVI + +++ T +S+ P ++ + V +PT + +
Sbjct: 757 PDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHTDRKSF 816
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+E D+PGL + V + ADL ++ A I T +R
Sbjct: 817 LELIALDQPGLLARVGKIFADLGISLHGARITTIGER 853
>gi|84686319|ref|ZP_01014214.1| PII uridylyl-transferase [Maritimibacter alkaliphilus HTCC2654]
gi|84665846|gb|EAQ12321.1| PII uridylyl-transferase [Rhodobacterales bacterium HTCC2654]
Length = 927
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 80/197 (40%), Gaps = 23/197 (11%)
Query: 16 RVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDV--NLVIKKAYISSDGGWFMDVFNV 73
R+ + + DAT + GI ++ L V N+V + Y + DG W VF V
Sbjct: 726 RIGLTQDHDRDATRAAFVLADHPGIFSRLAGALALVGANVVDARTYTTKDG-WATAVFWV 784
Query: 74 IDCDGKKIRD---KEVIDYIQQRLETDASFAPSLRS--------SVGVMPT--------- 113
D DG D K + D I + L +++S +PT
Sbjct: 785 QDHDGHPFEDIKLKRLEDMIHKTLSGKVIARDAMKSRDKMKKREKAFTVPTNITFDNDGS 844
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 173
+ +T IE DRPGL ++ LAD H + +A I T+ ++ +V D D
Sbjct: 845 DIYTMIEVDTRDRPGLLYDLTRTLADNHVYIASAVIATYGEQVVDTFYVKDMFGLKFFSD 904
Query: 174 PKRLSTIKELLFNVLRG 190
K S K+L +++G
Sbjct: 905 AKMKSLEKKLREAIVKG 921
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN+ T+I+VD+ ++ G+L + + L D ++ I A I++ G +D F V
Sbjct: 834 PTNITFDNDGSDIYTMIEVDTRDRPGLLYDLTRTLADNHVYIASAVIATYGEQVVDTFYV 893
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K + ++++L
Sbjct: 894 KDMFGLKFFSDAKMKSLEKKL 914
>gi|429202687|ref|ZP_19194057.1| protein-P-II uridylyltransferase [Streptomyces ipomoeae 91-03]
gi|428661779|gb|EKX61265.1| protein-P-II uridylyltransferase [Streptomyces ipomoeae 91-03]
Length = 684
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 42/83 (50%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
PPRV + ATVI+V + + G+L ++ + L + ++ A++S+ G +D F V
Sbjct: 599 PPRVTVAAAASRHATVIEVRAQDAPGLLHRIGRALEGAGVRVRSAHVSTLGANAVDAFYV 658
Query: 74 IDCDGKKIRDKEVIDYIQQRLET 96
+ G + +E ++ ET
Sbjct: 659 VGAKGAPLPGEEAAAVARKLEET 681
>gi|294085165|ref|YP_003551925.1| UTP:GlnB (protein PII) uridylyltransferase [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292664740|gb|ADE39841.1| UTP:GlnB (protein PII) uridylyltransferase [Candidatus
Puniceispirillum marinum IMCC1322]
Length = 972
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 7 KLIRRMN-PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGG 65
K IRR PPRV++ NN +VI+V+ + G L ++ + + + L I+ + IS+ G
Sbjct: 863 KRIRRFPVPPRVLLSNNISKTHSVIEVNGRDFPGFLHKITRCMVGLGLQIQSSSISTYGE 922
Query: 66 WFMDVFNVIDCDGKKIRDKEVIDYIQQRL 94
+DVF V D G +I ++ +I+ L
Sbjct: 923 RVVDVFYVKDIFGLQILNERRQQHIRNAL 951
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 79/190 (41%), Gaps = 24/190 (12%)
Query: 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS-DGGWFMDVFNVIDCDGKKIRDKE 85
AT + V +V+ G+ ++ + V + I A I++ G +DVF + D + + D
Sbjct: 772 ATEMTVITVDDPGLFSRIAGAVAAVGVNIASARITTCSDGTVLDVFYLQTIDNQVVDDAA 831
Query: 86 VI----DYIQQRLETDASFAPSLRSSVGVMP------------------TEEHTSIEFTG 123
++ D++ + A +L + P ++ H+ IE G
Sbjct: 832 LLTRIRDFVTKAAVGKMRIADALSARWQQTPKRIRRFPVPPRVLLSNNISKTHSVIEVNG 891
Query: 124 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 183
D PG ++ + L + ++ I T+ +R V +V D G I + +R I+
Sbjct: 892 RDFPGFLHKITRCMVGLGLQIQSSSISTYGERVVDVFYVKD-IFGLQILNERRQQHIRNA 950
Query: 184 LFNVLRGYDD 193
L VL+ D+
Sbjct: 951 LLAVLQASDE 960
>gi|294676023|ref|YP_003576638.1| PII uridylyl-transferase [Rhodobacter capsulatus SB 1003]
gi|294474843|gb|ADE84231.1| PII uridylyl-transferase [Rhodobacter capsulatus SB 1003]
Length = 920
Score = 43.9 bits (102), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P + DN T+++VD+ ++ G+L + + L N+ I A I++ G +D F V
Sbjct: 826 PTHITFDNEGSDIYTIVEVDTRDRPGLLYDLTRALASSNIYIASAVIATYGAQVVDTFYV 885
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ + + +++RL
Sbjct: 886 KDMFGLKLHSGQRQESLEKRL 906
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 96 TDASFAPSLRS------SVGVMPTEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNA 147
T A FA LR + + P +H T F +D PG+FS + LA + NVV+A
Sbjct: 701 THAIFAEMLRGLGDDEIRIDLDPDLDHDATRAAFALSDHPGIFSRLAGALALVGANVVDA 760
Query: 148 EIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRG 190
+T D A V S G+ + K L ++ ++ L+G
Sbjct: 761 RTYTSKDGYATAVFWVQDSEGHPYEATK-LPRLRGMIEKTLKG 802
>gi|453052437|gb|EME99919.1| PII uridylyl-transferase [Streptomyces mobaraensis NBRC 13819 = DSM
40847]
Length = 793
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 5 YAKLIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS 62
YA R + P P V + + DATV++V + + G+L ++ + L + ++ A++S+
Sbjct: 700 YAGRRRALPPAAPSVSVCDGGSHDATVLEVRAEDAPGLLYRIGRALEGAGVWVRSAHVST 759
Query: 63 DGGWFMDVFNVIDCDGKKIRDK-EVIDYIQQRL 94
G +D F V DG +R +V + +++ L
Sbjct: 760 LGASVVDAFYVTGVDGVPLRGAGDVAEAVERAL 792
>gi|32472257|ref|NP_865251.1| uridylyltransferase/uridylyl-removing enzyme glnD [Rhodopirellula
baltica SH 1]
gi|417301637|ref|ZP_12088784.1| protein-P-II uridylyltransferase [Rhodopirellula baltica WH47]
gi|440715491|ref|ZP_20896036.1| protein-P-II uridylyltransferase [Rhodopirellula baltica SWK14]
gi|32443493|emb|CAD72935.1| uridylyltransferase/uridylyl-removing enzyme glnD [Rhodopirellula
baltica SH 1]
gi|327542055|gb|EGF28552.1| protein-P-II uridylyltransferase [Rhodopirellula baltica WH47]
gi|436439516|gb|ELP32943.1| protein-P-II uridylyltransferase [Rhodopirellula baltica SWK14]
Length = 883
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 80/187 (42%), Gaps = 26/187 (13%)
Query: 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG-GWFMDVFNVIDCDGKK----IR 82
T++ + G+ ++ + L I +A + + G D F V D + K+ R
Sbjct: 694 TIVLRQGERRVGVFARITAAFSACGLSIMRANVETVGEDLLWDQFWVNDPELKQRQPESR 753
Query: 83 DKEVIDYIQQRLETDASFAPSLR-----------SSVGVMPT---------EEHTSIEFT 122
+EV + + L+ S P+ R SSV ++PT + T +
Sbjct: 754 IEEVCRVVTKALDDPDSVMPTPRRVWQTQGAKEPSSVLLLPTKVLFDNDTFDHQTILSMF 813
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
DRP L S++ L+ L + A+I TH D+ A V +VT+ G I D R TI+
Sbjct: 814 TYDRPSLLSDISGTLSQLDVVIQFAKIDTHLDQIADVFYVTN-PDGSPITDSDRQETIRN 872
Query: 183 LLFNVLR 189
L + +R
Sbjct: 873 ALVDAVR 879
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 43/81 (53%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P +V+ DN+T T++ + + ++ +L + L+ +++VI+ A I + DVF V
Sbjct: 794 PTKVLFDNDTFDHQTILSMFTYDRPSLLSDISGTLSQLDVVIQFAKIDTHLDQIADVFYV 853
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
+ DG I D + + I+ L
Sbjct: 854 TNPDGSPITDSDRQETIRNAL 874
>gi|398382543|ref|ZP_10540628.1| (protein-PII) uridylyltransferase [Sphingobium sp. AP49]
gi|397726649|gb|EJK87082.1| (protein-PII) uridylyltransferase [Sphingobium sp. AP49]
Length = 920
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 42/80 (52%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V+IDN TVI+V++ ++ +L + L + + A++++ G +D F V
Sbjct: 826 PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVT 885
Query: 75 DCDGKKIRDKEVIDYIQQRL 94
D G KI + + +++RL
Sbjct: 886 DLLGGKIESRARLQTLERRL 905
>gi|356558203|ref|XP_003547397.1| PREDICTED: uncharacterized protein LOC100793459 [Glycine max]
Length = 424
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 67/148 (45%), Gaps = 7/148 (4%)
Query: 11 RMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF--M 68
++ V +DN+ T++++ + G+L +++ L D+N+ I S + + +
Sbjct: 238 KLKKTNVTMDNSLSPAHTLVQIRCADHKGLLYDIMRTLKDLNMKISYGRFSPNSMGYRDL 297
Query: 69 DVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTD 125
D+F + DGKKI D E + RL+ + P P E +E +G
Sbjct: 298 DIF-IQQKDGKKILDPEKQSALCSRLKQEM-LHPLRVIIANRGPDTELLVANPVELSGMG 355
Query: 126 RPGLFSEVCAVLADLHCNVVNAEIWTHN 153
RP +F +V L + V +AE+ H+
Sbjct: 356 RPRVFYDVTFALKTVGICVFSAEVGRHS 383
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 13/151 (8%)
Query: 22 NTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKI 81
N D +I V+ +K G+ + +++ D L I K +S+DG W V VI +
Sbjct: 19 NKPGDPFIITVNCPDKTGLACDICRIILDFGLCIAKGDVSTDGVWCYIVLWVIP---YSV 75
Query: 82 RDKEVIDY--IQQRLETDASFAPSLRSSVGVMPTEEHTS----IEFTGTDRPGLFSEVCA 135
Y +++RL+ P +S V+ +S ++F DR GL +V
Sbjct: 76 LLPMSCSYLILKERLQ---KICPPCLASFYVIQQPSRSSPVYLLKFCCLDRKGLLHDVTK 132
Query: 136 VLADLHCNVVNAEIWTHND-RAAAVVHVTDH 165
VL++L + ++ T D R + VTD+
Sbjct: 133 VLSELELTIQKVKVTTTPDGRVLDLFFVTDN 163
>gi|404493132|ref|YP_006717238.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Pelobacter carbinolicus DSM 2380]
gi|77545196|gb|ABA88758.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Pelobacter carbinolicus DSM 2380]
Length = 906
Score = 43.9 bits (102), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P RV IDN D TV+ V + ++ G+L ++ + L D+ L + A IS+ D F V
Sbjct: 817 PSRVDIDNEVSQDYTVLDVFTHDEVGVLYRICRTLRDLGLYLGVAKISTKVDQVADTFYV 876
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D +KI D + ++ ++ +L
Sbjct: 877 KDIFSQKITDPDRMEEVRSQL 897
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%)
Query: 112 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 171
P +T + D PGLF+ + V+A N+ A+I+T D A + +GYA
Sbjct: 713 PDGFYTQLTIVTHDMPGLFTMITGVMAAYGINIFGAQIFTQRDGTAFDILQVKGPSGYAD 772
Query: 172 KDPKRLSTIKELLFNVLRG 190
++ T++E L V+ G
Sbjct: 773 ATSEKWRTVEESLLAVIEG 791
>gi|421611743|ref|ZP_16052875.1| protein-P-II uridylyltransferase [Rhodopirellula baltica SH28]
gi|408497456|gb|EKK01983.1| protein-P-II uridylyltransferase [Rhodopirellula baltica SH28]
Length = 883
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 80/187 (42%), Gaps = 26/187 (13%)
Query: 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG-GWFMDVFNVIDCDGKK----IR 82
T++ + G+ ++ + L I +A + + G D F V D + K+ R
Sbjct: 694 TIVLRQGERRVGVFARITAAFSACGLSIMRANVETVGEDLLWDQFWVNDPELKQRQPESR 753
Query: 83 DKEVIDYIQQRLETDASFAPSLR-----------SSVGVMPT---------EEHTSIEFT 122
+EV + + L+ S P+ R SSV ++PT + T +
Sbjct: 754 IEEVCRVVTKALDDPDSVMPTPRRVWQTQGAKEPSSVLLLPTKVLFDNDTFDHQTILSMF 813
Query: 123 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182
DRP L S++ L+ L + A+I TH D+ A V +VT+ G I D R TI+
Sbjct: 814 TYDRPSLLSDISGTLSQLDVVIQFAKIDTHLDQIADVFYVTN-PDGSPITDSDRQETIRN 872
Query: 183 LLFNVLR 189
L + +R
Sbjct: 873 ALVDAVR 879
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 43/81 (53%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P +V+ DN+T T++ + + ++ +L + L+ +++VI+ A I + DVF V
Sbjct: 794 PTKVLFDNDTFDHQTILSMFTYDRPSLLSDISGTLSQLDVVIQFAKIDTHLDQIADVFYV 853
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
+ DG I D + + I+ L
Sbjct: 854 TNPDGSPITDSDRQETIRNAL 874
>gi|16124269|ref|NP_418833.1| PII uridylyl-transferase [Caulobacter crescentus CB15]
gi|221232952|ref|YP_002515388.1| PII uridylyl-transferase [Caulobacter crescentus NA1000]
gi|22256766|sp|Q9AC53.1|GLND_CAUCR RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|254798830|sp|B8GWX0.1|GLND_CAUCN RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|13421101|gb|AAK22001.1| [protein-pII] uridylyltransferase [Caulobacter crescentus CB15]
gi|220962124|gb|ACL93480.1| protein-PII uridylyltransferase [Caulobacter crescentus NA1000]
Length = 940
Score = 43.9 bits (102), Expect = 0.072, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 37/69 (53%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V IDN+ DATV++ ++ G+L + + L D L I+ A+I G +D F V
Sbjct: 834 PSVTIDNDASNDATVVEASGRDRPGLLHALAKTLADSALSIQSAHIDGYGERAVDAFYVQ 893
Query: 75 DCDGKKIRD 83
+G K+ D
Sbjct: 894 TTEGGKVTD 902
>gi|237800142|ref|ZP_04588603.1| PII uridylyl-transferase [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331022999|gb|EGI03056.1| PII uridylyl-transferase [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 898
Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 86/201 (42%), Gaps = 31/201 (15%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 747
Query: 71 FNVIDCDGKKI-RDKEVIDYIQQRLETDA----------------------SFAPSLRSS 107
+ V+D +G I + E I I++ L T+A +FAP + +
Sbjct: 748 YIVLDHEGGSIGNNPERIQDIREGL-TEALHNPDDYPTIIKRRVPRQLKHFAFAPQV--T 804
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+ T +E DRPGL + V + + ++ NA+I T +R V +TD +
Sbjct: 805 IHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITD-AN 863
Query: 168 GYAIKDPKRLSTIKELLFNVL 188
+ DP+ S ++E + L
Sbjct: 864 NQPLSDPQLCSRLQEAIVKQL 884
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 61/119 (51%), Gaps = 13/119 (10%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L +V ++ + +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDL 839
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ----RLETDASFAPSLRSSV 108
++ A I++ G DVF + D + + + D ++ +Q+ +L ++ LR S+
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSRLQEAIVKQLSVNSDTGGDLRISI 898
>gi|111220372|ref|YP_711166.1| PII uridylyl-transferase [Frankia alni ACN14a]
gi|111147904|emb|CAJ59569.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl removing enzyme) (UTase) [Frankia alni ACN14a]
Length = 800
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 13 NPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72
PP+V+ D+ TV++V + ++ G+L ++++ L+++ L + A +++ G +D F
Sbjct: 681 GPPQVIFDDG-LGSTTVLEVRAPDRAGVLFRIVRALSELRLDVATAIVATLGLDVVDAFY 739
Query: 73 VIDCDGKKIRD 83
V + DG+ + D
Sbjct: 740 VQEADGRPVAD 750
>gi|383188836|ref|YP_005198964.1| (protein-PII) uridylyltransferase [Rahnella aquatilis CIP 78.65 =
ATCC 33071]
gi|371587094|gb|AEX50824.1| (protein-PII) uridylyltransferase [Rahnella aquatilis CIP 78.65 =
ATCC 33071]
Length = 896
Score = 43.9 bits (102), Expect = 0.074, Method: Composition-based stats.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 17/158 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P V++ T I + S ++ + V L+ NL I A I ++ G MD F V
Sbjct: 702 PLVLVSRQATRGGTEIFIWSPDRPYLFATVAGELDRRNLSIHDAQIFTNRDGMAMDTFIV 761
Query: 74 IDCDGKKI-RDK-EVIDYIQQRLETDASFAP------------SLRSSVGVMPT--EEHT 117
++ DG + +D+ E I Y ++ T A P S+++ V +PT + T
Sbjct: 762 LEPDGSPLAQDRHEAIRYALEQSMTQAYQPPRARRPSPKLRHFSVQTEVSFLPTHTDRRT 821
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+E D+PGL + + V +DL ++ A I T +R
Sbjct: 822 YMELVALDQPGLLARIGEVFSDLGLSLHGARISTIGER 859
>gi|422297483|ref|ZP_16385118.1| (protein-PII) uridylyltransferase [Pseudomonas avellanae BPIC 631]
gi|407991091|gb|EKG33029.1| (protein-PII) uridylyltransferase [Pseudomonas avellanae BPIC 631]
Length = 788
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 84/200 (42%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 578 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 637
Query: 71 FNVIDCDGKKI-----RDKEVIDYIQQRLET-----------------DASFAPSLRSSV 108
+ V+D +G I R +++ D + + L +FAP + ++
Sbjct: 638 YIVLDHEGGSIGNNPERIQDIRDGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQV--TI 695
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 696 HNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 754
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP+ S ++E + L
Sbjct: 755 QPLSDPQLCSQLQEAIVKQL 774
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 61/119 (51%), Gaps = 13/119 (10%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 670 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 729
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ----RLETDASFAPSLRSSV 108
++ A I++ G DVF + D + + + D ++ +Q+ +L ++ LR S+
Sbjct: 730 SLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSQLQEAIVKQLSVNSEPGGDLRISI 788
>gi|255575072|ref|XP_002528441.1| amino acid binding protein, putative [Ricinus communis]
gi|223532117|gb|EEF33924.1| amino acid binding protein, putative [Ricinus communis]
Length = 420
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 7/144 (4%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD--GGWFMDVFNVI 74
V +DNN T++++ +++ G+ +++ D N+ + SS G MD+F +
Sbjct: 240 VTVDNNMSPAHTLLQLKCIDQKGLFYDILRTSKDCNIRVAYGRFSSSLKGYRNMDLF-IQ 298
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFS 131
DGKKI D + + RL+ + P P E +E +G RP +F
Sbjct: 299 QTDGKKIMDPKHQLMLCSRLKAEM-LRPFRVIIANRGPDTELLVANPVELSGKGRPRVFY 357
Query: 132 EVCAVLADLHCNVVNAEIWTHNDR 155
+V L L + +AEI H+ +
Sbjct: 358 DVTLALKTLGICIFSAEIARHSTQ 381
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 66/146 (45%), Gaps = 11/146 (7%)
Query: 25 ADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDK 84
D TV+ V+ ++ G+ + +++ + L I +A S+DG W VF V+ K
Sbjct: 19 GDPTVVTVNCPDQAGLGCDLCRIILEFGLSISRADFSTDGRWCYIVFWVVP---HSTSHK 75
Query: 85 EVIDYIQQRLETDA-----SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLAD 139
D ++ RL + F +S+V +P+ ++F DR GL +V +L +
Sbjct: 76 VNWDSLKNRLSCASPPCLGPFYFDQKSNVTSVPS--LYLLKFCFVDRKGLLHDVAKILTE 133
Query: 140 LHCNVVNAEIWTHND-RAAAVVHVTD 164
L + ++ T D + + +TD
Sbjct: 134 LEFTIQRVKVMTTPDGKVVDLFFITD 159
>gi|422657758|ref|ZP_16720197.1| PII uridylyl-transferase [Pseudomonas syringae pv. lachrymans str.
M302278]
gi|331016365|gb|EGH96421.1| PII uridylyl-transferase [Pseudomonas syringae pv. lachrymans str.
M302278]
Length = 898
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 84/200 (42%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 747
Query: 71 FNVIDCDGKKI-----RDKEVIDYIQQRLET-----------------DASFAPSLRSSV 108
+ V+D +G I R +++ D + + L +FAP + ++
Sbjct: 748 YIVLDHEGGSIGNNPERIQDIRDGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQV--TI 805
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 806 HNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 864
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP+ S ++E + L
Sbjct: 865 QPLSDPQLCSQLQEAIVKQL 884
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 839
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF + D + + + D ++ +Q+
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSQLQE 878
>gi|304320147|ref|YP_003853790.1| PII uridylyl-transferase [Parvularcula bermudensis HTCC2503]
gi|303299050|gb|ADM08649.1| PII uridylyl-transferase [Parvularcula bermudensis HTCC2503]
Length = 872
Score = 43.9 bits (102), Expect = 0.077, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 178
+E DRPGL + LA++ ++ A + T+ RA ++ D + GY I+DP+R+
Sbjct: 802 VEVETRDRPGLLHLLAVSLAEIGVDIEFALVATYGHRAVDTFYLQD-APGYKIEDPRRIE 860
Query: 179 TIKELLFNVLRGYDD 193
IK +LR DD
Sbjct: 861 AIKR---GLLRALDD 872
>gi|356533259|ref|XP_003535183.1| PREDICTED: uncharacterized protein LOC100789465 [Glycine max]
Length = 411
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 83/184 (45%), Gaps = 14/184 (7%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD--GGWFMDVFNVI 74
+ +DN T++++ + G+L +++ L D N+ I ++ G +D+F ++
Sbjct: 234 ITMDNLLSPAHTLVQIMCQDHKGLLYDIMRTLKDYNIQISYGRFTTKPRGKCEIDLF-IM 292
Query: 75 DCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGTDRPGLFS 131
DGKKI D + + RL + P + V P E +E +G RP +F
Sbjct: 293 QADGKKIVDPNKQNSLSSRLRMEL-LRPLRVAIVSRGPDTELLVSNPVELSGKGRPLVFY 351
Query: 132 EVCAVLADLHCNVVNAEIWTH--NDRAAAVVHV-TDHSTGYAIKDPKRLSTIKELLFNVL 188
++ L L + +A+I H DR V + D G ++ K ++E ++ +L
Sbjct: 352 DITLALKMLDTCIFSAKIGRHLIGDREWEVYRILLDEGEGLSVPRNK----VEEGVWKML 407
Query: 189 RGYD 192
G++
Sbjct: 408 MGWE 411
>gi|224028845|gb|ACN33498.1| unknown [Zea mays]
gi|413950198|gb|AFW82847.1| hypothetical protein ZEAMMB73_547714 [Zea mays]
Length = 516
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 15/146 (10%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVI--------KKAYIS--SDGGW 66
V DN+ T++++ ++ G++ +++ + D N+ I KK S S G
Sbjct: 325 VNFDNSLSPAHTLVQIVCADQKGLIYDILRTMKDCNIQIFYGRFRSDKKGSASKGSSGCR 384
Query: 67 FMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTG 123
+D+F V DGKK+ D D ++ RL ++ + P VG P E +E +G
Sbjct: 385 EVDLF-VKQVDGKKVTDPAKQDALRSRLRSE-TLHPLRVMVVGRGPDTELLVANPVEASG 442
Query: 124 TDRPGLFSEVCAVLADLHCNVVNAEI 149
RP +F + L L + +AEI
Sbjct: 443 KGRPRVFYDATLALKALGICIFSAEI 468
>gi|441506204|ref|ZP_20988180.1| uridylyltransferase protein-PII [Photobacterium sp. AK15]
gi|441426152|gb|ELR63638.1| uridylyltransferase protein-PII [Photobacterium sp. AK15]
Length = 872
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 70/159 (44%), Gaps = 17/159 (10%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNV 73
P +++ T + V +K + V+ L+ NL + A I +S G+ +D F V
Sbjct: 680 PLILLSKKPTRGGTEVFVYCQDKTKLFAIVVSELDKKNLSVHDAQIMTSKDGYALDTFMV 739
Query: 74 IDCDGK--------KIRDKEVIDYIQQRLETDASFAP------SLRSSVGVMPTE--EHT 117
+D GK +R + Q + E P ++++ V +PT+ + T
Sbjct: 740 LDPSGKALNEGRHNSVRRALIKALTQMKSERKKKRPPRKLLHFNVKTRVDFLPTKTGKKT 799
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+E D PGL + V +V A + ++ A+I T +RA
Sbjct: 800 MMELVALDMPGLLARVGSVFARQNISLQAAKITTIGERA 838
>gi|379709769|ref|YP_005264974.1| GTP pyrophosphokinase [Nocardia cyriacigeorgica GUH-2]
gi|374847268|emb|CCF64338.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((p)ppGpp synthetase) [Nocardia
cyriacigeorgica GUH-2]
Length = 803
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177
+I+ DR L S+V VLAD N+++A + TH DR A+ T + + DPK L
Sbjct: 727 AIQIEALDRTRLLSDVTKVLADEKVNILSASVATHGDR-VAISKFT-----FEMGDPKHL 780
Query: 178 STIKELLFNVLRGYDDFR 195
I ++ NV YD +R
Sbjct: 781 GHILNVVRNVEGVYDVYR 798
>gi|28868738|ref|NP_791357.1| [protein-pII] uridylyltransferase [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213969116|ref|ZP_03397255.1| [protein-pII] uridylyltransferase [Pseudomonas syringae pv. tomato
T1]
gi|301383989|ref|ZP_07232407.1| PII uridylyl-transferase [Pseudomonas syringae pv. tomato Max13]
gi|302061957|ref|ZP_07253498.1| PII uridylyl-transferase [Pseudomonas syringae pv. tomato K40]
gi|302134052|ref|ZP_07260042.1| PII uridylyl-transferase [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|38257473|sp|Q886P5.1|GLND_PSESM RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|28851977|gb|AAO55052.1| [protein-pII] uridylyltransferase [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213926114|gb|EEB59670.1| [protein-pII] uridylyltransferase [Pseudomonas syringae pv. tomato
T1]
Length = 898
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 84/200 (42%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 747
Query: 71 FNVIDCDGKKI-----RDKEVIDYIQQRLET-----------------DASFAPSLRSSV 108
+ V+D +G I R +++ D + + L +FAP + ++
Sbjct: 748 YIVLDHEGGSIGNNPERIQDIRDGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQV--TI 805
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 806 HNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 864
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP+ S ++E + L
Sbjct: 865 QPLSDPQLCSQLQEAIVKQL 884
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 839
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF + D + + + D ++ +Q+
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSQLQE 878
>gi|413950195|gb|AFW82844.1| hypothetical protein ZEAMMB73_547714 [Zea mays]
Length = 441
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 15/146 (10%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVI--------KKAYIS--SDGGW 66
V DN+ T++++ ++ G++ +++ + D N+ I KK S S G
Sbjct: 250 VNFDNSLSPAHTLVQIVCADQKGLIYDILRTMKDCNIQIFYGRFRSDKKGSASKGSSGCR 309
Query: 67 FMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTG 123
+D+F V DGKK+ D D ++ RL ++ + P VG P E +E +G
Sbjct: 310 EVDLF-VKQVDGKKVTDPAKQDALRSRLRSE-TLHPLRVMVVGRGPDTELLVANPVEASG 367
Query: 124 TDRPGLFSEVCAVLADLHCNVVNAEI 149
RP +F + L L + +AEI
Sbjct: 368 KGRPRVFYDATLALKALGICIFSAEI 393
>gi|395785698|ref|ZP_10465426.1| protein-P-II uridylyltransferase [Bartonella tamiae Th239]
gi|423717410|ref|ZP_17691600.1| protein-P-II uridylyltransferase [Bartonella tamiae Th307]
gi|395424156|gb|EJF90343.1| protein-P-II uridylyltransferase [Bartonella tamiae Th239]
gi|395427625|gb|EJF93716.1| protein-P-II uridylyltransferase [Bartonella tamiae Th307]
Length = 927
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 25/161 (15%)
Query: 51 VNLVIKKAYISSDGGWFMDVFNV-----IDCDGKKIRDKEVIDYIQQRLETD-------A 98
N+V + + +SDG +D+ + D D K R + V + I+Q L+ A
Sbjct: 760 ANIVDAQIFTTSDGR-ALDIILIKRAFDFDEDETK-RARRVKEIIEQALKGTIRLPDEIA 817
Query: 99 SFAPSLRSS--VGVMPT--------EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAE 148
AP R+ V PT E + IE DRPGL S++ L+DL ++ +A
Sbjct: 818 RHAPPKRTRKIFDVTPTVEINNDLSETFSVIEVKSMDRPGLLSDLTKTLSDLSLDIASAH 877
Query: 149 IWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLR 189
I T ++A +V D G+ + +P+R + I L ++++
Sbjct: 878 ITTFGEKAIDSFYVRD-LIGHKLTNPQRQTRICHKLLSIVQ 917
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 43/71 (60%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P V I+N+ +VI+V S+++ G+L + + L+D++L I A+I++ G +D F V
Sbjct: 833 PTVEINNDLSETFSVIEVKSMDRPGLLSDLTKTLSDLSLDIASAHITTFGEKAIDSFYVR 892
Query: 75 DCDGKKIRDKE 85
D G K+ + +
Sbjct: 893 DLIGHKLTNPQ 903
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 105 RSSVGVMPT----EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVV 160
++S+ +M T E+ T I D P L S + A N+V+A+I+T +D A +
Sbjct: 719 KTSLSIMMTPRASEDVTEITLLAPDHPRLLSIITGACAAAGANIVDAQIFTTSDGRALDI 778
Query: 161 HVTDHSTGYAIKDPKRLSTIKELLFNVLRG 190
+ + + + KR +KE++ L+G
Sbjct: 779 ILIKRAFDFDEDETKRARRVKEIIEQALKG 808
>gi|212557763|gb|ACJ30217.1| Protein-P-II uridylyltransferase [Shewanella piezotolerans WP3]
Length = 851
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 19/159 (11%)
Query: 17 VVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDVFNVID 75
V+I +T T + + +K + V+ +L++ N+ + A I +S + +D F +++
Sbjct: 663 VLISKHTTRGGTELFIYGKDKPKLFATVMAILDNKNINVHDATIMNSKDNYALDSFVILE 722
Query: 76 CDGKKIRDKEVIDYIQQRL----ETDASFAPSLR------------SSVGVMPTEEHTS- 118
DGK + I I++ L +D + P R + V PT H +
Sbjct: 723 QDGKPVSQLSRIQGIKKTLIKALSSDTAKLPKFRNLSRKMKPFKVATQVSFPPTRRHGTS 782
Query: 119 -IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+E D PGL + + VL ++ A+I T +RA
Sbjct: 783 MMELIALDAPGLLARIGEVLFRCEVRLLAAKITTIGERA 821
>gi|449017425|dbj|BAM80827.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 291
Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 71/167 (42%), Gaps = 29/167 (17%)
Query: 15 PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74
P + DN + AT + V ++ G+L + L + L I++A + G D F V
Sbjct: 82 PSITADNESQYYATRLVVTCRDRKGLLSDLTDALKSIGLQIRRAVARTKDGIASDEFFVT 141
Query: 75 DCDGKKIRDKEVIDYIQQRLE----TDASFAPSLRSSVGVMP------------------ 112
DG ++ D + +D ++Q L+ T P +++ +P
Sbjct: 142 R-DGSQLSDTD-LDAVEQALQPVMGTSGPTCPVPQNTERRLPAPQSPVRFVDHNRGVHVY 199
Query: 113 -----TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND 154
++ +T+I DRP L +E+ VL +L N+ A + T+ D
Sbjct: 200 VDNHASQHYTTITVNAPDRPNLLNEIIDVLHELELNITFACLSTYAD 246
>gi|385808872|ref|YP_005845268.1| PII family uridylyltransferase [Ignavibacterium album JCM 16511]
gi|383800920|gb|AFH48000.1| PII family uridylyltransferase [Ignavibacterium album JCM 16511]
Length = 856
Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 7/106 (6%)
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA-VVHVTDHSTGYAIK 172
+++T+I D P L S++C VLA N+ +A+I+T D +VTD T I
Sbjct: 667 DDYTNITIITKDFPALLSKLCGVLAINDANIHDAKIFTRKDGIVIDTFNVTDFRTHKKI- 725
Query: 173 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMF 218
DP + I+ L L GY + K + L +R +RL Q +F
Sbjct: 726 DPSKYQKIENDLTKALTGYLEVNKEVSMLK-----SRWKRLEQKLF 766
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 7 KLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGW 66
KL +R +V DN+ T+I V S ++ G L + + ++++ LVI A IS+ G
Sbjct: 764 KLFKRSGQVKVSFDNH--ERYTIIDVFSPDRLGFLYHITRKMSELGLVIHFAKISTKGDD 821
Query: 67 FMDVFNVIDCDGKKIR-------DKEVIDYIQQRL 94
+D F V++ GKKI +E+I+ I+Q L
Sbjct: 822 IVDSFYVLNQSGKKISPSDQAFIKEELINTIEQIL 856
>gi|372271448|ref|ZP_09507496.1| PII uridylyl-transferase [Marinobacterium stanieri S30]
Length = 884
Score = 43.5 bits (101), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 44/79 (55%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P R+ I N+ TV+++ + ++ G+L ++ ++ + ++ ++KA ISS G D F +
Sbjct: 795 PTRMTISNDPVVQQTVLEIITPDRPGLLARIGRIFVEFDISVRKAKISSIGERVEDFFFI 854
Query: 74 IDCDGKKIRDKEVIDYIQQ 92
D + I D E+ +QQ
Sbjct: 855 TDSQNQPISDPELCRELQQ 873
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 71/170 (41%), Gaps = 22/170 (12%)
Query: 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDVFNVIDCDGKKIRDK- 84
AT I + S + + + ++ +NL I+ A I +D G ++ + V+ D + + +
Sbjct: 698 ATEIFIYSEDLPTLFPATVAAMDQLNLNIQDARIILTDHGRTLNTYTVLTDDNQPLSENP 757
Query: 85 EVIDYIQQRLETDAS-------------------FAPSLRSSVGVMPTEEHTSIEFTGTD 125
E + +IQQ L + F R ++ P + T +E D
Sbjct: 758 EYLAHIQQHLTEELDDPEDYPDIIQRRVPRQLKLFTTPTRMTISNDPVVQQTVLEIITPD 817
Query: 126 RPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 175
RPGL + + + + +V A+I + +R +TD S I DP+
Sbjct: 818 RPGLLARIGRIFVEFDISVRKAKISSIGERVEDFFFITD-SQNQPISDPE 866
>gi|257487087|ref|ZP_05641128.1| PII uridylyl-transferase, partial [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
Length = 403
Score = 43.5 bits (101), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 90/210 (42%), Gaps = 36/210 (17%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 193 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 252
Query: 71 FNVIDCDGKKIRDK-EVIDYIQQRLETDA----------------------SFAPSLRSS 107
+ V+D +G I D E + I+ L T+A +FAP + +
Sbjct: 253 YIVLDNEGGSIGDNPERVQEIRNGL-TEALRNPDDYPTIIKRRVPRQLKHFAFAPQV--T 309
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+ T +E DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 310 IHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-AN 368
Query: 168 GYAIKDPKRLST-----IKELLFNVLRGYD 192
+ + DP+ S +K+L N G+D
Sbjct: 369 NHPLSDPQLCSQLQDAIVKQLSVNSEPGHD 398
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 285 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 344
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ----QRLETDASFAPSLRSSV 108
++ A I++ G DVF + D + + D ++ +Q ++L ++ LR S+
Sbjct: 345 SLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQLQDAIVKQLSVNSEPGHDLRISI 403
>gi|358448298|ref|ZP_09158802.1| PII uridylyl-transferase [Marinobacter manganoxydans MnI7-9]
gi|357227395|gb|EHJ05856.1| PII uridylyl-transferase [Marinobacter manganoxydans MnI7-9]
Length = 881
Score = 43.5 bits (101), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P V N+T TV++V + ++ G+L ++ QVL + + + A I++ G DVF V
Sbjct: 793 PTEVTFSNDTINQRTVMEVITPDRPGLLARIGQVLLEHRVRLSNAKIATLGERVEDVFFV 852
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G+ IR+ V +QQ L
Sbjct: 853 TDEHGEPIREPAVCQALQQDL 873
Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 22/163 (13%)
Query: 47 VLNDVNLVIKKAYISS-DGGWFMDVFNVIDCDGKKI------RDKEVIDYIQQRLETDAS 99
VL +NL I A ISS +G + + + V+D G+ + +++ + I++ + D
Sbjct: 716 VLEQLNLNIVDARISSSEGPYSISSYVVLDEKGQPLGIDPARKERVRLRLIEELDDPDDY 775
Query: 100 FAPSLRSSVGVM-----PTE---------EHTSIEFTGTDRPGLFSEVCAVLADLHCNVV 145
R + + PTE + T +E DRPGL + + VL + +
Sbjct: 776 PDIIHRRTPRQLKHFAFPTEVTFSNDTINQRTVMEVITPDRPGLLARIGQVLLEHRVRLS 835
Query: 146 NAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188
NA+I T +R V VTD G I++P +++ L +L
Sbjct: 836 NAKIATLGERVEDVFFVTDEH-GEPIREPAVCQALQQDLCKML 877
>gi|336248809|ref|YP_004592519.1| PII uridylyl-transferase [Enterobacter aerogenes KCTC 2190]
gi|334734865|gb|AEG97240.1| PII uridylyl-transferase [Enterobacter aerogenes KCTC 2190]
Length = 887
Score = 43.5 bits (101), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P +++ + T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 689 LSKPMILLSSRATRGGTEIFIWSPDRPYLFAAVCGELDRRNLSVHDAQIFTTRDGMAMDT 748
Query: 71 FNVIDCDGKKIRD--KEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG + E I + ++ T S+ P S+ + V +PT
Sbjct: 749 FIVLEPDGSPLSADRHEAIRHGLEQTITQRSWEPPAPRRQAAKLRHFSVATEVNFLPTHT 808
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ + +E D+PGL + V V ADL ++ A I T +R
Sbjct: 809 DRKSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGER 850
>gi|253700950|ref|YP_003022139.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter sp. M21]
gi|251775800|gb|ACT18381.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter sp. M21]
Length = 894
Score = 43.5 bits (101), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%)
Query: 14 PPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNV 73
P RV IDN +D TVI + + +K G+L + L + L I + IS+ DVF V
Sbjct: 808 PARVEIDNEVSSDYTVIDIYAHDKIGLLYAITSTLTRLGLYIGVSKISTKVDQVADVFYV 867
Query: 74 IDCDGKKIRDKEVIDYIQQRL 94
D G K+ + ++ I++ L
Sbjct: 868 KDIFGAKVMNPVKLEEIRKEL 888
>gi|336317530|ref|ZP_08572382.1| (protein-PII) uridylyltransferase [Rheinheimera sp. A13L]
gi|335878152|gb|EGM76099.1| (protein-PII) uridylyltransferase [Rheinheimera sp. A13L]
Length = 874
Score = 43.5 bits (101), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 77/170 (45%), Gaps = 21/170 (12%)
Query: 8 LIRRMNP--PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG- 64
++R +P P V++D +T + + + ++ + ++ L+ + I A I ++
Sbjct: 669 ILRHKDPDEPLVLVDKTPFRGSTQVFIYTPDQDNLFAHLVAALDSKKVNIFDAQIMTNKD 728
Query: 65 GWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSL-----RSSVGVMP------- 112
G+ MD F V++ +G+ + + +++ LET S P L R S + P
Sbjct: 729 GYAMDTFVVLEQNGEPVTSPSRLQSLKRALETYISGKPELSRGKPRLSRQMRPFNIAPKV 788
Query: 113 ------TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 156
+ T +E T D PGL +++ +V ++ A+I T ++A
Sbjct: 789 VFIPGANKHRTMVEITALDMPGLLADIGSVFQQCEISIHAAKITTIGEKA 838
>gi|422651057|ref|ZP_16713856.1| PII uridylyl-transferase [Pseudomonas syringae pv. actinidiae str.
M302091]
gi|330964139|gb|EGH64399.1| PII uridylyl-transferase [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 898
Score = 43.5 bits (101), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 84/200 (42%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 747
Query: 71 FNVIDCDGKKI-----RDKEVIDYIQQRLET-----------------DASFAPSLRSSV 108
+ V+D +G I R +++ D + + L +FAP + ++
Sbjct: 748 YIVLDHEGGSIGNNPERIQDIRDGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQV--TI 805
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 806 HNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 864
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP+ S ++E + L
Sbjct: 865 QPLSDPQLCSLLQEAIVKQL 884
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 839
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF + D + + + D ++ +Q+
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSLLQE 878
>gi|317152370|ref|YP_004120418.1| protein-P-II uridylyltransferase [Desulfovibrio aespoeensis Aspo-2]
gi|316942621|gb|ADU61672.1| protein-P-II uridylyltransferase [Desulfovibrio aespoeensis Aspo-2]
Length = 873
Score = 43.5 bits (101), Expect = 0.090, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 101 APSLRSSVGV--MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 158
AP LR V V ++ T +E DR G ++ L+ ++ A+I T RAA
Sbjct: 782 APRLRPIVTVDNQGSDFFTLVEVAAPDRIGFLHDMARTLSGHGLSIHIAKITTIKGRAAD 841
Query: 159 VVHVTDHSTGYAIKDPKRLSTIKELLFN 186
+ HV DH TG + DP+R+ T++ L +
Sbjct: 842 IFHVRDH-TGAKLTDPERIETLRRDLLH 868
>gi|395233825|ref|ZP_10412063.1| PII uridylyl-transferase [Enterobacter sp. Ag1]
gi|394731681|gb|EJF31410.1| PII uridylyl-transferase [Enterobacter sp. Ag1]
Length = 886
Score = 43.5 bits (101), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI-SSDGGWFMDV 70
++ P +++ T I + S ++ + V L+ NL + A I ++ G MD
Sbjct: 689 LSQPMILLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDT 748
Query: 71 FNVIDCDGK--KIRDKEVIDYIQQRLETDASFAP-------------SLRSSVGVMPT-- 113
F V++ DG I +I + ++ T ++ P ++ + V +PT
Sbjct: 749 FIVLEPDGSPLSIDRHNIIRHSLEQAITQTTWQPPQPRRQSAKLRHFTVDTEVNFLPTHT 808
Query: 114 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155
+ T +E D+PGL + V V ADL ++ A I T +R
Sbjct: 809 DRRTFLELIALDQPGLLARVGEVFADLGISLYGARITTIGER 850
>gi|301058658|ref|ZP_07199659.1| protein-P-II uridylyltransferase [delta proteobacterium NaphS2]
gi|300447222|gb|EFK10986.1| protein-P-II uridylyltransferase [delta proteobacterium NaphS2]
Length = 878
Score = 43.5 bits (101), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 1 MDDEYAKLIRRMNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYI 60
+D EY + + P+++++N T+I+V + N+ G+L + + L ++ L I+ A I
Sbjct: 783 LDSEY----KPSHAPKILVNNRASDFFTLIEVFADNRVGLLYDITRTLFELGLDIRIAKI 838
Query: 61 SSDGGWFMDVFNVIDCDGKKIRDKE 85
++ DVF V D +G+K+ D++
Sbjct: 839 ATKADQVADVFYVRDLEGQKVEDEK 863
Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Query: 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA-VVHVTDHS-TGYAIKDPKR 176
I F DRPG+FS + VLA NVV A I+T D + T H+ +A++ K+
Sbjct: 696 ITFMSKDRPGIFSRMAGVLAINRINVVAANIYTWGDGTVVDIFKATPHADRHHALEVWKK 755
Query: 177 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERR 212
+ E +V RG + P I++ E +
Sbjct: 756 VQKDAE---DVFRGNLSLEDRLKEKAKPSILDSEYK 788
>gi|422628315|ref|ZP_16693524.1| PII uridylyl-transferase, partial [Pseudomonas syringae pv. pisi
str. 1704B]
gi|330936832|gb|EGH40981.1| PII uridylyl-transferase [Pseudomonas syringae pv. pisi str. 1704B]
Length = 623
Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 61/119 (51%), Gaps = 13/119 (10%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L +V ++ + +L
Sbjct: 505 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDL 564
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRD----KEVIDYIQQRLETDASFAPSLRSSV 108
++ A I++ G DVF + D + + D +++ D I Q+L ++ LR S+
Sbjct: 565 SLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQLQDEIVQQLSVNSEQGGDLRISI 623
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 82/188 (43%), Gaps = 31/188 (16%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKA-YISSDGGWFMDV 70
P V+I T + T I + + ++H + ++ +NL I A I+S + +D
Sbjct: 413 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDT 472
Query: 71 FNVIDCDGKKI-RDKEVIDYIQQRLETDA----------------------SFAPSLRSS 107
+ V+D +G I + E I I++ L T+A +FAP + +
Sbjct: 473 YIVLDHEGGSIGNNPERIQDIREGL-TEALRNPDDYPTIIKRRVPRQLKHFAFAPQV--T 529
Query: 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 167
+ T +E DRPGL + V + + ++ NA+I T +R V +TD +
Sbjct: 530 IHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITD-AN 588
Query: 168 GYAIKDPK 175
+ + DP+
Sbjct: 589 NHPLSDPQ 596
>gi|422587022|ref|ZP_16661693.1| PII uridylyl-transferase [Pseudomonas syringae pv. morsprunorum
str. M302280]
gi|330872741|gb|EGH06890.1| PII uridylyl-transferase [Pseudomonas syringae pv. morsprunorum
str. M302280]
Length = 898
Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 84/200 (42%), Gaps = 29/200 (14%)
Query: 15 PRVVIDNNTCAD---ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWF-MDV 70
P V+I T + T I + + ++H + ++ +NL I A I + F +D
Sbjct: 688 PLVLIKETTQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDT 747
Query: 71 FNVIDCDGKKI-----RDKEVIDYIQQRLET-----------------DASFAPSLRSSV 108
+ V+D +G I R +++ D + + L +FAP + ++
Sbjct: 748 YIVLDHEGGSIGNNPERIQDIRDGLTEALRNPDDYPTIIKRRVPRQLKHFAFAPQV--TI 805
Query: 109 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 168
T +E DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 806 HNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-ANN 864
Query: 169 YAIKDPKRLSTIKELLFNVL 188
+ DP+ S ++E + L
Sbjct: 865 QPLSDPQLCSLLQEAIVKQL 884
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 3 DEYAKLIRRMNP---------PRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNL 53
D+Y +I+R P P+V I N+ TV+++ + ++ G+L ++ ++ + +L
Sbjct: 780 DDYPTIIKRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDL 839
Query: 54 VIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92
++ A I++ G DVF + D + + + D ++ +Q+
Sbjct: 840 SLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSLLQE 878
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.136 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,249,645,505
Number of Sequences: 23463169
Number of extensions: 167868851
Number of successful extensions: 376848
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 802
Number of HSP's that attempted gapping in prelim test: 373176
Number of HSP's gapped (non-prelim): 3594
length of query: 272
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 132
effective length of database: 9,074,351,707
effective search space: 1197814425324
effective search space used: 1197814425324
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 75 (33.5 bits)