Query 024087
Match_columns 272
No_of_seqs 267 out of 1647
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 17:59:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024087.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024087hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2nyi_A Unknown protein; protei 99.8 4.8E-19 1.6E-23 152.4 14.7 154 26-188 4-163 (195)
2 1u8s_A Glycine cleavage system 99.7 2.3E-17 7.8E-22 141.1 13.9 153 26-189 5-167 (192)
3 3p96_A Phosphoserine phosphata 98.9 5.6E-08 1.9E-12 91.4 16.8 132 26-164 11-150 (415)
4 2f06_A Conserved hypothetical 98.7 1.1E-06 3.8E-11 70.9 16.5 130 28-188 7-136 (144)
5 2nyi_A Unknown protein; protei 98.3 2.2E-06 7.6E-11 73.0 10.0 72 115-190 4-75 (195)
6 1zpv_A ACT domain protein; str 98.3 2.4E-06 8.2E-11 63.3 8.5 65 115-186 4-68 (91)
7 2ko1_A CTR148A, GTP pyrophosph 98.3 5.5E-06 1.9E-10 60.6 9.7 64 116-186 5-68 (88)
8 1u8s_A Glycine cleavage system 98.2 6.7E-06 2.3E-10 69.5 9.4 65 116-188 6-70 (192)
9 1zpv_A ACT domain protein; str 98.2 2.3E-05 7.8E-10 57.9 10.8 50 27-76 5-54 (91)
10 2re1_A Aspartokinase, alpha an 97.8 0.00039 1.3E-08 57.5 12.5 110 25-147 23-137 (167)
11 2ko1_A CTR148A, GTP pyrophosph 97.7 0.0004 1.4E-08 50.4 10.1 65 27-97 5-69 (88)
12 3obi_A Formyltetrahydrofolate 97.6 0.0033 1.1E-07 56.8 17.7 117 27-151 6-124 (288)
13 3o1l_A Formyltetrahydrofolate 97.6 0.0019 6.6E-08 58.7 16.1 49 26-74 21-71 (302)
14 3n0v_A Formyltetrahydrofolate 97.6 0.0036 1.2E-07 56.4 17.0 48 27-74 8-57 (286)
15 2dtj_A Aspartokinase; protein- 97.5 0.0042 1.4E-07 51.8 15.1 110 25-147 13-129 (178)
16 3lou_A Formyltetrahydrofolate 97.4 0.0055 1.9E-07 55.4 16.3 49 26-74 9-59 (292)
17 2f1f_A Acetolactate synthase i 97.4 0.00043 1.5E-08 57.6 8.2 66 117-190 4-71 (164)
18 3nrb_A Formyltetrahydrofolate 97.4 0.0061 2.1E-07 54.9 16.4 114 26-151 6-123 (287)
19 2dt9_A Aspartokinase; protein- 97.4 0.0011 3.7E-08 54.7 9.7 110 24-147 13-129 (167)
20 2jhe_A Transcription regulator 97.2 0.001 3.5E-08 54.1 8.0 59 118-186 2-60 (190)
21 3lou_A Formyltetrahydrofolate 97.2 0.00026 8.8E-09 64.2 4.3 37 115-151 9-45 (292)
22 2pc6_A Probable acetolactate s 97.1 0.0013 4.4E-08 54.8 7.9 66 117-190 5-72 (165)
23 3nrb_A Formyltetrahydrofolate 97.0 0.00061 2.1E-08 61.5 5.2 37 115-151 6-42 (287)
24 3p96_A Phosphoserine phosphata 97.0 0.0014 4.8E-08 61.2 7.7 48 115-162 11-58 (415)
25 3obi_A Formyltetrahydrofolate 97.0 0.0006 2.1E-08 61.6 4.9 37 115-151 5-41 (288)
26 3n0v_A Formyltetrahydrofolate 97.0 0.00064 2.2E-08 61.4 5.0 38 115-152 7-44 (286)
27 3o1l_A Formyltetrahydrofolate 96.9 0.0011 3.6E-08 60.4 5.7 38 115-152 21-58 (302)
28 2fgc_A Acetolactate synthase, 96.9 0.0034 1.2E-07 53.5 8.3 67 116-190 29-97 (193)
29 3s1t_A Aspartokinase; ACT doma 96.7 0.016 5.4E-07 48.6 10.9 111 25-148 14-131 (181)
30 1y7p_A Hypothetical protein AF 96.4 0.0051 1.8E-07 53.3 6.4 38 116-153 4-41 (223)
31 2f1f_A Acetolactate synthase i 96.2 0.018 6.3E-07 47.7 8.4 130 28-185 4-140 (164)
32 4go7_X Aspartokinase; transfer 96.2 0.015 5E-07 49.8 7.7 122 12-148 21-150 (200)
33 3ab4_A Aspartokinase; aspartat 96.1 0.16 5.5E-06 47.7 15.2 109 26-147 263-378 (421)
34 2pc6_A Probable acetolactate s 95.9 0.027 9.1E-07 46.7 8.2 130 28-185 5-141 (165)
35 1y7p_A Hypothetical protein AF 95.4 0.038 1.3E-06 47.8 7.1 48 27-74 4-56 (223)
36 2jhe_A Transcription regulator 95.1 0.04 1.4E-06 44.4 6.3 60 29-97 2-61 (190)
37 3c1m_A Probable aspartokinase; 95.0 0.24 8.3E-06 47.3 12.3 123 25-164 316-452 (473)
38 2f06_A Conserved hypothetical 94.9 0.083 2.8E-06 41.8 7.5 35 117-151 7-41 (144)
39 2fgc_A Acetolactate synthase, 94.8 0.18 6.3E-06 42.7 9.7 130 27-185 29-167 (193)
40 3l76_A Aspartokinase; alloster 94.3 0.52 1.8E-05 46.4 13.1 120 15-147 347-476 (600)
41 1sc6_A PGDH, D-3-phosphoglycer 93.2 0.21 7.2E-06 46.9 7.7 60 12-74 319-378 (404)
42 3k5p_A D-3-phosphoglycerate de 93.0 0.18 6E-06 47.7 6.8 59 12-72 330-388 (416)
43 1ygy_A PGDH, D-3-phosphoglycer 92.7 0.47 1.6E-05 45.9 9.6 64 113-182 451-516 (529)
44 2qmx_A Prephenate dehydratase; 92.6 0.48 1.7E-05 42.4 8.9 58 115-175 199-257 (283)
45 3tvi_A Aspartokinase; structur 92.4 0.72 2.5E-05 43.8 10.3 107 26-148 297-409 (446)
46 3luy_A Probable chorismate mut 91.9 1.1 3.8E-05 40.9 10.5 61 117-180 207-270 (329)
47 3l76_A Aspartokinase; alloster 91.9 5.8 0.0002 38.9 16.4 118 25-157 442-569 (600)
48 2qmw_A PDT, prephenate dehydra 91.7 0.54 1.9E-05 41.7 8.0 59 114-176 184-246 (267)
49 1sc6_A PGDH, D-3-phosphoglycer 91.6 0.4 1.4E-05 44.9 7.4 48 115-162 330-377 (404)
50 3mwb_A Prephenate dehydratase; 91.3 0.91 3.1E-05 41.2 9.1 59 115-176 200-260 (313)
51 3k5p_A D-3-phosphoglycerate de 90.5 1.9 6.6E-05 40.5 11.0 51 113-163 340-390 (416)
52 3mtj_A Homoserine dehydrogenas 89.6 0.5 1.7E-05 44.9 6.1 52 113-164 356-409 (444)
53 1ygy_A PGDH, D-3-phosphoglycer 89.5 2 7E-05 41.4 10.6 62 26-92 453-516 (529)
54 2cdq_A Aspartokinase; aspartat 86.9 2.3 8E-05 41.0 9.0 122 26-164 340-467 (510)
55 2re1_A Aspartokinase, alpha an 85.9 0.57 2E-05 38.1 3.6 38 112-149 21-59 (167)
56 2dt9_A Aspartokinase; protein- 81.2 0.98 3.4E-05 36.6 3.1 36 113-148 13-49 (167)
57 3mah_A Aspartokinase; aspartat 80.4 3.3 0.00011 33.0 6.1 98 26-147 17-120 (157)
58 1phz_A Protein (phenylalanine 78.1 2.3 7.9E-05 40.1 4.9 50 115-164 33-83 (429)
59 2dtj_A Aspartokinase; protein- 78.0 4.3 0.00015 33.2 6.1 41 112-152 11-52 (178)
60 4go7_X Aspartokinase; transfer 75.0 2.3 7.9E-05 35.9 3.7 38 110-147 29-67 (200)
61 3luy_A Probable chorismate mut 73.9 27 0.00094 31.6 10.8 51 36-88 217-268 (329)
62 2qmx_A Prephenate dehydratase; 72.3 8.6 0.00029 34.2 6.9 52 26-79 199-252 (283)
63 3g12_A Putative lactoylglutath 67.6 20 0.00068 26.6 7.3 49 26-81 66-115 (128)
64 3mwb_A Prephenate dehydratase; 66.5 11 0.00039 33.9 6.5 52 26-79 200-254 (313)
65 2qmw_A PDT, prephenate dehydra 66.0 12 0.00041 32.9 6.4 48 26-74 185-237 (267)
66 3s1t_A Aspartokinase; ACT doma 65.5 21 0.00071 29.2 7.5 71 13-96 86-159 (181)
67 3ab4_A Aspartokinase; aspartat 59.7 35 0.0012 31.5 8.8 37 115-151 263-300 (421)
68 3mtj_A Homoserine dehydrogenas 57.8 16 0.00055 34.5 6.1 50 26-75 358-409 (444)
69 1rwu_A Hypothetical UPF0250 pr 49.7 81 0.0028 23.8 8.1 66 25-97 34-102 (109)
70 3g12_A Putative lactoylglutath 47.4 61 0.0021 23.8 6.9 49 116-172 67-116 (128)
71 3mah_A Aspartokinase; aspartat 46.5 12 0.0004 29.7 2.7 47 114-164 16-65 (157)
72 1zhv_A Hypothetical protein AT 46.3 14 0.00049 29.0 3.2 44 116-164 62-108 (134)
73 3r6a_A Uncharacterized protein 42.3 74 0.0025 24.1 6.8 47 28-81 67-113 (144)
74 1ib8_A Conserved protein SP14. 40.0 1.3E+02 0.0045 24.1 8.2 95 40-151 14-111 (164)
75 1phz_A Protein (phenylalanine 38.6 34 0.0012 32.2 4.9 48 25-73 32-81 (429)
76 1zvp_A Hypothetical protein VC 36.5 41 0.0014 26.3 4.4 44 116-164 71-117 (133)
77 3tvi_A Aspartokinase; structur 36.5 1.5E+02 0.005 27.8 9.0 58 12-75 363-423 (446)
78 3kol_A Oxidoreductase, glyoxal 34.4 68 0.0023 23.6 5.4 39 40-81 108-146 (156)
79 4g6x_A Glyoxalase/bleomycin re 32.8 1.2E+02 0.0043 22.7 6.8 38 41-81 109-146 (155)
80 2i7r_A Conserved domain protei 30.2 1.2E+02 0.0042 21.2 6.0 49 27-81 64-112 (118)
81 3kol_A Oxidoreductase, glyoxal 30.0 67 0.0023 23.6 4.7 48 116-171 99-146 (156)
82 3e5d_A Putative glyoxalase I; 29.7 92 0.0032 21.9 5.3 39 41-81 85-123 (127)
83 3ghj_A Putative integron gene 29.1 93 0.0032 23.1 5.3 50 115-171 87-136 (141)
84 2j0w_A Lysine-sensitive aspart 27.7 28 0.00095 32.7 2.3 120 26-164 307-432 (449)
85 3r6a_A Uncharacterized protein 27.6 1.3E+02 0.0044 22.6 6.0 39 130-172 76-114 (144)
86 3c1m_A Probable aspartokinase; 27.6 73 0.0025 29.9 5.3 63 114-184 316-381 (473)
87 3sk2_A EHPR; antibiotic resist 27.4 1.1E+02 0.0039 22.1 5.5 51 27-81 73-126 (132)
88 2a4x_A Mitomycin-binding prote 27.1 1.4E+02 0.0047 21.7 6.0 53 26-81 71-123 (138)
89 2cdq_A Aspartokinase; aspartat 27.1 52 0.0018 31.5 4.2 69 113-186 338-410 (510)
90 3itw_A Protein TIOX; bleomycin 26.8 1.8E+02 0.0061 20.9 7.5 47 29-81 71-117 (137)
91 3rri_A Glyoxalase/bleomycin re 26.3 1.1E+02 0.0037 22.0 5.2 43 39-81 79-123 (135)
92 3m2o_A Glyoxalase/bleomycin re 26.3 1.1E+02 0.0038 23.4 5.4 47 29-81 93-139 (164)
93 3zw5_A Glyoxalase domain-conta 25.8 69 0.0024 23.9 4.0 42 129-171 100-142 (147)
94 3l7t_A SMU.1112C, putative unc 25.4 63 0.0021 22.9 3.6 49 27-81 82-130 (134)
95 2rbb_A Glyoxalase/bleomycin re 25.3 1.5E+02 0.0051 21.6 5.9 51 28-81 77-127 (141)
96 1f9z_A Glyoxalase I; beta-alph 25.0 1.8E+02 0.0063 20.5 7.6 51 26-81 71-121 (135)
97 3rri_A Glyoxalase/bleomycin re 24.6 1.1E+02 0.0038 22.0 4.9 44 128-172 79-124 (135)
98 3zw5_A Glyoxalase domain-conta 24.0 1.2E+02 0.0042 22.5 5.2 42 40-81 100-142 (147)
99 1tdj_A Biosynthetic threonine 23.9 2.3E+02 0.008 26.9 8.1 122 27-155 338-471 (514)
100 3ey7_A Biphenyl-2,3-DIOL 1,2-d 23.6 1.1E+02 0.0038 21.6 4.7 49 119-171 76-125 (133)
101 1ss4_A Glyoxalase family prote 23.2 92 0.0031 22.8 4.3 47 29-81 98-144 (153)
102 2p25_A Glyoxalase family prote 22.9 77 0.0026 22.2 3.6 47 29-81 76-122 (126)
103 2pjs_A AGR_C_3564P, uncharacte 22.2 1.4E+02 0.0049 20.7 5.0 39 41-81 75-113 (119)
104 3hdp_A Glyoxalase-I; glutathio 21.9 1.6E+02 0.0054 20.9 5.3 53 25-81 76-128 (133)
105 1zhv_A Hypothetical protein AT 21.8 60 0.0021 25.4 2.9 32 26-57 61-95 (134)
106 2rk9_A Glyoxalase/bleomycin re 21.8 2.4E+02 0.0081 20.6 6.7 48 30-81 77-130 (145)
107 3rhe_A NAD-dependent benzaldeh 21.3 1.5E+02 0.0051 22.3 5.2 51 27-81 68-118 (148)
108 1zvp_A Hypothetical protein VC 21.2 1.3E+02 0.0043 23.4 4.7 35 24-58 68-105 (133)
109 2qsw_A Methionine import ATP-b 21.1 1.2E+02 0.0042 21.7 4.4 37 127-164 37-73 (100)
110 2a4x_A Mitomycin-binding prote 20.4 1.8E+02 0.0063 21.0 5.5 50 118-171 74-123 (138)
111 3rmu_A Methylmalonyl-COA epime 20.2 58 0.002 23.1 2.4 51 27-81 78-129 (134)
No 1
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.80 E-value=4.8e-19 Score=152.42 Aligned_cols=154 Identities=18% Similarity=0.187 Sum_probs=115.2
Q ss_pred CeEEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEecC-CEEEEEEEEEcCCCCCCCcHHHHHHHHHHHhcccC---CC
Q 024087 26 DATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDG-GWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDAS---FA 101 (272)
Q Consensus 26 ~~t~V~V~s~DrpGLl~~v~~vL~d~gl~I~~A~I~T~g-g~~~dvF~V~d~~G~~~~~~~~~~~I~~aL~~~~~---~~ 101 (272)
..++|+|+|+|||||++.++++|+++|+||.+|++++.+ +++| .|.|..+.. ......+.|++.|..... +.
T Consensus 4 ~~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~~~~f~m-~~~v~~~~~---~~~~~~~~l~~~L~~~~~~~~~~ 79 (195)
T 2nyi_A 4 QSFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACLGGDFAM-IVLVSLNAK---DGKLIQSALESALPGFQISTRRA 79 (195)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEE-EEEEEESSS---SSHHHHHHHHHHSTTCEEEEEEC
T ss_pred eEEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEECCeEEE-EEEEEecCc---cchhHHHHHHHHHHHHHHhcCCe
Confidence 457999999999999999999999999999999999854 4555 788765421 222356778888865421 11
Q ss_pred CCccceeeeCCCCceeEEEEEcCCCcchHHHHHHHHHhCCCcEEEEEEEeeC--CeeEEEEEEEeCCCCCCCCCHHHHHH
Q 024087 102 PSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHN--DRAAAVVHVTDHSTGYAIKDPKRLST 179 (272)
Q Consensus 102 ~~~~~~v~~~~~~~~T~Iev~~~DRpGLL~~It~vL~~~g~~I~~A~i~T~g--~rv~dvFyVtd~~~G~~i~d~~~l~~ 179 (272)
...+.... ......++|+|.|+|||||+++|+++|+++|+||..++..|.+ ++..++||++. .-+.| ++.. +.
T Consensus 80 ~~~~~~~~-~~~~~~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~-~~~~~--~~~~-~~ 154 (195)
T 2nyi_A 80 SSVAERHV-SPDTREYELYVEGPDSEGIVEAVTAVLAKKGANIVELETETLPAPFAGFTLFRMGS-RVAFP--FPLY-QE 154 (195)
T ss_dssp CCC----C-CTTEEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEE-EEEEE--GGGH-HH
T ss_pred EEEEeCCc-CCCCcEEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceeeecccccCCCCeEEEEE-EEEcC--CCcc-HH
Confidence 11110001 3344678999999999999999999999999999999999998 77889999988 34444 2344 77
Q ss_pred HHHHhcccc
Q 024087 180 IKELLFNVL 188 (272)
Q Consensus 180 i~~~L~~~L 188 (272)
|++.|..+.
T Consensus 155 l~~~l~~~a 163 (195)
T 2nyi_A 155 VVTALSRVE 163 (195)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777777544
No 2
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.74 E-value=2.3e-17 Score=141.07 Aligned_cols=153 Identities=12% Similarity=0.125 Sum_probs=108.8
Q ss_pred CeEEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCCCcHHHHHHHHHHHhccc---CCCC
Q 024087 26 DATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDA---SFAP 102 (272)
Q Consensus 26 ~~t~V~V~s~DrpGLl~~v~~vL~d~gl~I~~A~I~T~gg~~~dvF~V~d~~G~~~~~~~~~~~I~~aL~~~~---~~~~ 102 (272)
...+|+|.|+||||++++++++|+++|+||.++++++.+|.+.-.+.|..+. ...+.|++.|.... .+..
T Consensus 5 ~~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~~~~f~~~~~v~~~~-------~~~~~l~~~L~~~~~~~~~~~ 77 (192)
T 1u8s_A 5 QHLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTLLMLISGSP-------SNITRVETTLPLLGQQHDLIT 77 (192)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEECH-------HHHHHHHHHHHHHHHHHTCEE
T ss_pred cEEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeecCCceEEEEEEecCC-------CCHHHHHHHHHHHHHhcCCEE
Confidence 3578999999999999999999999999999999998666666588886431 23345555544321 1100
Q ss_pred Cccceee---eCCCCceeEEEEEcCCCcchHHHHHHHHHhCCCcEEEEEEEeeCC----eeEEEEEEEeCCCCCCCCCHH
Q 024087 103 SLRSSVG---VMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND----RAAAVVHVTDHSTGYAIKDPK 175 (272)
Q Consensus 103 ~~~~~v~---~~~~~~~T~Iev~~~DRpGLL~~It~vL~~~g~~I~~A~i~T~g~----rv~dvFyVtd~~~G~~i~d~~ 175 (272)
... ... .......++|+|.|+||||++++|+.+|+++|+||..++..|.++ +..+.||++.. -+.| ++.
T Consensus 78 ~~~-~~~~~~~~~~~~~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~t~~~~~~~~~~~~F~~~~~-~~~~--~~~ 153 (192)
T 1u8s_A 78 MMK-RTSPHDHQTHAYTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAIS-ARVD--SGC 153 (192)
T ss_dssp EEE-EECCCCCCCCSEEEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEEE-EEEC--TTS
T ss_pred EEE-eCCCCCCccCCceEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhhcccCCccCCCCCEEEEEEE-EeCC--CCC
Confidence 000 000 123446789999999999999999999999999999999999984 68899999873 3333 233
Q ss_pred HHHHHHHHhccccc
Q 024087 176 RLSTIKELLFNVLR 189 (272)
Q Consensus 176 ~l~~i~~~L~~~L~ 189 (272)
.++.|++.|..+..
T Consensus 154 ~~~~l~~~l~~~~~ 167 (192)
T 1u8s_A 154 NLMQLQEEFDALCT 167 (192)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 45677787776544
No 3
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.88 E-value=5.6e-08 Score=91.44 Aligned_cols=132 Identities=13% Similarity=0.050 Sum_probs=91.6
Q ss_pred CeEEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCCCcHHHHHHHHHHHhcccC-CCCCc
Q 024087 26 DATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDAS-FAPSL 104 (272)
Q Consensus 26 ~~t~V~V~s~DrpGLl~~v~~vL~d~gl~I~~A~I~T~gg~~~dvF~V~d~~G~~~~~~~~~~~I~~aL~~~~~-~~~~~ 104 (272)
...+|+|.|+|||||.+.++++|+++|+||.++..+..+|+|.-...+.-+.+. .. .+.|++.|..... +..
T Consensus 11 ~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~~~~f~~~~~~~~~~~~-~~----~~~l~~~l~~~~~~~~~-- 83 (415)
T 3p96_A 11 VSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVIRHRLTLGVLVCCPADV-AD----GPALRHDVEAAIRKVGL-- 83 (415)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEETTEEEEEEEEEECHHH-HT----SHHHHHHHHHHHHHTTC--
T ss_pred CeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEECCEeEEEEEEEecCCc-CC----HHHHHHHHHHHHHHcCe--
Confidence 457899999999999999999999999999999999988877655555432211 11 1344444433210 010
Q ss_pred cceeee------CCCCceeEEEEEcCC-CcchHHHHHHHHHhCCCcEEEEEEEeeCCeeEEEEEEEe
Q 024087 105 RSSVGV------MPTEEHTSIEFTGTD-RPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164 (272)
Q Consensus 105 ~~~v~~------~~~~~~T~Iev~~~D-RpGLL~~It~vL~~~g~~I~~A~i~T~g~rv~dvFyVtd 164 (272)
...+.. .....+..+.|.+.| +||++.+|+.+|+++|+||.....-+......--|++.-
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~~~~~~~~~~~~v~~ 150 (415)
T 3p96_A 84 DVSIERSDDVPIIREPSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGVSDYPVIGLELRVSV 150 (415)
T ss_dssp EEEEEECSSSCSSCCCCSEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEEESSSSEEEEEEEEC
T ss_pred EEEEEECCcccccCCCCcEEEEEEeCCCCHHHHHHHHHHHHHcCCCccceeeccCCCceEEEEEeeC
Confidence 011110 133457899999999 999999999999999999988887774333333377743
No 4
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=98.69 E-value=1.1e-06 Score=70.92 Aligned_cols=130 Identities=18% Similarity=0.200 Sum_probs=83.4
Q ss_pred EEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCCCcHHHHHHHHHHHhcccCCCCCccce
Q 024087 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSS 107 (272)
Q Consensus 28 t~V~V~s~DrpGLl~~v~~vL~d~gl~I~~A~I~T~gg~~~dvF~V~d~~G~~~~~~~~~~~I~~aL~~~~~~~~~~~~~ 107 (272)
..++|..+|+||.++++++.|++.|+||..-.+.......+-.|.+. +. +..++.|..... ...
T Consensus 7 ~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~~~~~~~~~~--------d~---~~a~~~L~~~G~-----~v~ 70 (144)
T 2f06_A 7 KQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENADFGILRGIVS--------DP---DKAYKALKDNHF-----AVN 70 (144)
T ss_dssp EEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEES--------CH---HHHHHHHHHTTC-----CEE
T ss_pred EEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecCCCCEEEEEeC--------CH---HHHHHHHHHcCC-----eEe
Confidence 57888999999999999999999999999877753221111123321 11 233444443210 000
Q ss_pred eeeCCCCceeEEEEEcCCCcchHHHHHHHHHhCCCcEEEEEEEeeCCeeEEEEEEEeCCCCCCCCCHHHHHHHHHHhccc
Q 024087 108 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 187 (272)
Q Consensus 108 v~~~~~~~~T~Iev~~~DRpGLL~~It~vL~~~g~~I~~A~i~T~g~rv~dvFyVtd~~~G~~i~d~~~l~~i~~~L~~~ 187 (272)
...++-+..+|+||.+++|+++|++.|+||........+.+...+|-+.| .....+.|+++...+
T Consensus 71 -------~~svv~v~~~d~pGvla~i~~~L~~~~InI~~~~~~~~~~~~~~~i~~~d--------~~~A~~~L~~~g~~v 135 (144)
T 2f06_A 71 -------ITDVVGISCPNVPGALAKVLGFLSAEGVFIEYMYSFANNNVANVVIRPSN--------MDKCIEVLKEKKVDL 135 (144)
T ss_dssp -------EEEEEEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEESC--------HHHHHHHHHHTTCEE
T ss_pred -------eeeEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEEccCCcEEEEEEeCC--------HHHHHHHHHHcCCEE
Confidence 12367777889999999999999999999987765534556666554422 123345556554444
Q ss_pred c
Q 024087 188 L 188 (272)
Q Consensus 188 L 188 (272)
+
T Consensus 136 ~ 136 (144)
T 2f06_A 136 L 136 (144)
T ss_dssp E
T ss_pred e
Confidence 3
No 5
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=98.34 E-value=2.2e-06 Score=73.01 Aligned_cols=72 Identities=17% Similarity=0.192 Sum_probs=59.3
Q ss_pred ceeEEEEEcCCCcchHHHHHHHHHhCCCcEEEEEEEeeCCeeEEEEEEEeCCCCCCCCCHHHHHHHHHHhcccccC
Q 024087 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRG 190 (272)
Q Consensus 115 ~~T~Iev~~~DRpGLL~~It~vL~~~g~~I~~A~i~T~g~rv~dvFyVtd~~~G~~i~d~~~l~~i~~~L~~~L~~ 190 (272)
..++|.|.|+|||||++.|+.+|+++||||..|++.+..++..-.|.|.. . +. ..+.+++.|++.|..++..
T Consensus 4 ~~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~~~~f~m~~~v~~-~-~~--~~~~~~~~l~~~L~~~~~~ 75 (195)
T 2nyi_A 4 QSFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACLGGDFAMIVLVSL-N-AK--DGKLIQSALESALPGFQIS 75 (195)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEE-S-SS--SSHHHHHHHHHHSTTCEEE
T ss_pred eEEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEECCeEEEEEEEEe-c-Cc--cchhHHHHHHHHHHHHHHh
Confidence 35789999999999999999999999999999999998888777888875 3 22 2345678899999876643
No 6
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=98.32 E-value=2.4e-06 Score=63.30 Aligned_cols=65 Identities=14% Similarity=0.231 Sum_probs=48.3
Q ss_pred ceeEEEEEcCCCcchHHHHHHHHHhCCCcEEEEEEEeeCCeeEEEEEEEeCCCCCCCCCHHHHHHHHHHhcc
Q 024087 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFN 186 (272)
Q Consensus 115 ~~T~Iev~~~DRpGLL~~It~vL~~~g~~I~~A~i~T~g~rv~dvFyVtd~~~G~~i~d~~~l~~i~~~L~~ 186 (272)
..+.|.+.++||||+|++|+.+|+++|+||......+..+...-.+.+.- . + + ..++.|.+.|..
T Consensus 4 ~~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~~~~~~~i~v~~-~-~-~----~~l~~l~~~L~~ 68 (91)
T 1zpv_A 4 MKAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLDEYFTMMAVVSS-D-E-K----QDFTYLRNEFEA 68 (91)
T ss_dssp EEEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEE-S-S-C----CCHHHHHHHHHH
T ss_pred ceEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEcCEEEEEEEEEe-C-C-C----CCHHHHHHHHHH
Confidence 35689999999999999999999999999999999887765555554532 1 2 1 234556666654
No 7
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=98.28 E-value=5.5e-06 Score=60.58 Aligned_cols=64 Identities=16% Similarity=0.306 Sum_probs=49.1
Q ss_pred eeEEEEEcCCCcchHHHHHHHHHhCCCcEEEEEEEeeCCeeEEEEEEEeCCCCCCCCCHHHHHHHHHHhcc
Q 024087 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFN 186 (272)
Q Consensus 116 ~T~Iev~~~DRpGLL~~It~vL~~~g~~I~~A~i~T~g~rv~dvFyVtd~~~G~~i~d~~~l~~i~~~L~~ 186 (272)
.+.|.+.+.||||+|++|+++|++.|+||.+..+.+.++.+...|.+.- .+...++.+.++|..
T Consensus 5 ~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~~~~~~~~i~v~~-------~~~~~l~~l~~~L~~ 68 (88)
T 2ko1_A 5 LAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAKDGIFTCNLMIFV-------KNTDKLTTLMDKLRK 68 (88)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEECSSEEEEEEEEEE-------SSHHHHHHHHHHHTT
T ss_pred EEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEcCCEEEEEEEEEE-------CCHHHHHHHHHHHhc
Confidence 5689999999999999999999999999999999887764444443332 235566666666654
No 8
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=98.18 E-value=6.7e-06 Score=69.49 Aligned_cols=65 Identities=25% Similarity=0.468 Sum_probs=54.1
Q ss_pred eeEEEEEcCCCcchHHHHHHHHHhCCCcEEEEEEEeeCCeeEEEEEEEeCCCCCCCCCHHHHHHHHHHhcccc
Q 024087 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 188 (272)
Q Consensus 116 ~T~Iev~~~DRpGLL~~It~vL~~~g~~I~~A~i~T~g~rv~dvFyVtd~~~G~~i~d~~~l~~i~~~L~~~L 188 (272)
.++|.|.|+|||||++.|+.+|+++|+||..+.+.+..+...-.|.|.. . ....+.|++.|..++
T Consensus 6 ~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~~~~f~~~~~v~~-~-------~~~~~~l~~~L~~~~ 70 (192)
T 1u8s_A 6 HLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTLLMLISG-S-------PSNITRVETTLPLLG 70 (192)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEE-C-------HHHHHHHHHHHHHHH
T ss_pred EEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeecCCceEEEEEEec-C-------CCCHHHHHHHHHHHH
Confidence 5689999999999999999999999999999999998888777777765 2 135677777776544
No 9
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=98.16 E-value=2.3e-05 Score=57.90 Aligned_cols=50 Identities=20% Similarity=0.200 Sum_probs=43.8
Q ss_pred eEEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcC
Q 024087 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDC 76 (272)
Q Consensus 27 ~t~V~V~s~DrpGLl~~v~~vL~d~gl~I~~A~I~T~gg~~~dvF~V~d~ 76 (272)
...|+|.++||||++++++++|+++|+||.+....+.+|.+.-.+.+.-+
T Consensus 5 ~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~~~~~~~i~v~~~ 54 (91)
T 1zpv_A 5 KAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLDEYFTMMAVVSSD 54 (91)
T ss_dssp EEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEES
T ss_pred eEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEcCEEEEEEEEEeC
Confidence 46899999999999999999999999999999999877887767776433
No 10
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=97.77 E-value=0.00039 Score=57.50 Aligned_cols=110 Identities=16% Similarity=0.184 Sum_probs=74.4
Q ss_pred CCeEEEEEEe-cCCCcHHHHHHHHHHhCCceEEEEEEEe-cCCEEEEEEEEEcCCCCCCCcHHHHHHHHHHHhcccCCCC
Q 024087 25 ADATVIKVDS-VNKHGILLQVIQVLNDVNLVIKKAYISS-DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAP 102 (272)
Q Consensus 25 ~~~t~V~V~s-~DrpGLl~~v~~vL~d~gl~I~~A~I~T-~gg~~~dvF~V~d~~G~~~~~~~~~~~I~~aL~~~~~~~~ 102 (272)
++.+.|+|.+ +|+||.++++..+|++.|++|..-..+. .+|..--.|.|...+. ++..+.|..... ..
T Consensus 23 ~~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~s~~~~g~~~isf~v~~~~~---------~~a~~~l~~~~~-~l 92 (167)
T 2re1_A 23 KNQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPRGDY---------KQTLEILSERQD-SI 92 (167)
T ss_dssp CCCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEEC----CEEEEEEEECGGGH---------HHHHHHHHHSST-TT
T ss_pred CCEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEcCCCCCCeeEEEEEEechHH---------HHHHHHHHHHHH-Hc
Confidence 3678999985 9999999999999999999998766542 2454444566653211 222333433210 00
Q ss_pred CccceeeeCCCCceeEEEEEcCC---CcchHHHHHHHHHhCCCcEEEE
Q 024087 103 SLRSSVGVMPTEEHTSIEFTGTD---RPGLFSEVCAVLADLHCNVVNA 147 (272)
Q Consensus 103 ~~~~~v~~~~~~~~T~Iev~~~D---RpGLL~~It~vL~~~g~~I~~A 147 (272)
.. ..+. ...+...+.|.|.+ +||+++++.++|.+.|+||...
T Consensus 93 ~~-~~i~--~~~~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~i 137 (167)
T 2re1_A 93 GA-ASID--GDDTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMI 137 (167)
T ss_dssp TC-SEEE--EESSEEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCEE
T ss_pred CC-ceEE--ecCCEEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEEE
Confidence 01 1111 12356789999987 9999999999999999999884
No 11
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=97.68 E-value=0.0004 Score=50.39 Aligned_cols=65 Identities=14% Similarity=0.253 Sum_probs=49.4
Q ss_pred eEEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCCCcHHHHHHHHHHHhcc
Q 024087 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETD 97 (272)
Q Consensus 27 ~t~V~V~s~DrpGLl~~v~~vL~d~gl~I~~A~I~T~gg~~~dvF~V~d~~G~~~~~~~~~~~I~~aL~~~ 97 (272)
.+.|.|.++||||+|++++++|++.|+||....+.+.++.+...|.+.-. ++...+.+.+.|...
T Consensus 5 ~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~~~~~~~~i~v~~~------~~~~l~~l~~~L~~~ 69 (88)
T 2ko1_A 5 LAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAKDGIFTCNLMIFVK------NTDKLTTLMDKLRKV 69 (88)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEECSSEEEEEEEEEES------SHHHHHHHHHHHTTC
T ss_pred EEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEcCCEEEEEEEEEEC------CHHHHHHHHHHHhcC
Confidence 45788999999999999999999999999999998865555555555432 234556677777654
No 12
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=97.65 E-value=0.0033 Score=56.75 Aligned_cols=117 Identities=11% Similarity=0.089 Sum_probs=69.4
Q ss_pred eEEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEe--cCCEEEEEEEEEcCCCCCCCcHHHHHHHHHHHhcccCCCCCc
Q 024087 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS--DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSL 104 (272)
Q Consensus 27 ~t~V~V~s~DrpGLl~~v~~vL~d~gl~I~~A~I~T--~gg~~~dvF~V~d~~G~~~~~~~~~~~I~~aL~~~~~~~~~~ 104 (272)
..+++|.|+|||||.+++++.|+++|+||.+++.++ ..|+|.-...+.-+.+ ... .+.|++.|..... ..
T Consensus 6 ~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~-~~~----~~~L~~~f~~la~---~~ 77 (288)
T 3obi_A 6 QYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAAAK-VIP----LASLRTGFGVIAA---KF 77 (288)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEESSC-CCC----HHHHHHHHHHHHH---HT
T ss_pred eEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEcCCC-CCC----HHHHHHHHHHHHH---Hc
Confidence 468999999999999999999999999999999985 4677665555543332 222 2334444432210 01
Q ss_pred cceeeeCCCCceeEEEEEcCCCcchHHHHHHHHHhCCCcEEEEEEEe
Q 024087 105 RSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 151 (272)
Q Consensus 105 ~~~v~~~~~~~~T~Iev~~~DRpGLL~~It~vL~~~g~~I~~A~i~T 151 (272)
...+.+........|-|-..-+---|.+|-....+-.+++.-+-|-+
T Consensus 78 ~m~~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~~Vis 124 (288)
T 3obi_A 78 TMGWHMRDRETRRKVMLLVSQSDHCLADILYRWRVGDLHMIPTAIVS 124 (288)
T ss_dssp TCEEEEEETTSCEEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEE
T ss_pred CCEEEeeccCCCcEEEEEEcCCCCCHHHHHHHHHCCCCCeEEEEEEc
Confidence 11222211122223434344444567777777776666654444444
No 13
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=97.64 E-value=0.0019 Score=58.68 Aligned_cols=49 Identities=24% Similarity=0.354 Sum_probs=42.2
Q ss_pred CeEEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEec--CCEEEEEEEEE
Q 024087 26 DATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD--GGWFMDVFNVI 74 (272)
Q Consensus 26 ~~t~V~V~s~DrpGLl~~v~~vL~d~gl~I~~A~I~T~--gg~~~dvF~V~ 74 (272)
...+++|.|+|||||.+.+++.|+++|+||.+++.+++ .|+|.-...+.
T Consensus 21 ~~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~ 71 (302)
T 3o1l_A 21 RTFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIR 71 (302)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEE
T ss_pred ceEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEEe
Confidence 45789999999999999999999999999999999975 67776555554
No 14
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=97.58 E-value=0.0036 Score=56.43 Aligned_cols=48 Identities=13% Similarity=0.101 Sum_probs=40.7
Q ss_pred eEEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEe--cCCEEEEEEEEE
Q 024087 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS--DGGWFMDVFNVI 74 (272)
Q Consensus 27 ~t~V~V~s~DrpGLl~~v~~vL~d~gl~I~~A~I~T--~gg~~~dvF~V~ 74 (272)
..+++|.|+|||||.+.+++.|+++|+||.+++.++ ..|+|.-...+.
T Consensus 8 ~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~ 57 (286)
T 3n0v_A 8 TWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVEFR 57 (286)
T ss_dssp CEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEE
T ss_pred cEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCeeEEEEEEe
Confidence 478999999999999999999999999999999996 457665444444
No 15
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=97.49 E-value=0.0042 Score=51.79 Aligned_cols=110 Identities=16% Similarity=0.180 Sum_probs=73.8
Q ss_pred CCeEEEEE-EecCCCcHHHHHHHHHHhCCceEEEEEEEec---CCEEEEEEEEEcCCCCCCCcHHHHHHHHHHHhcccCC
Q 024087 25 ADATVIKV-DSVNKHGILLQVIQVLNDVNLVIKKAYISSD---GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASF 100 (272)
Q Consensus 25 ~~~t~V~V-~s~DrpGLl~~v~~vL~d~gl~I~~A~I~T~---gg~~~dvF~V~d~~G~~~~~~~~~~~I~~aL~~~~~~ 100 (272)
++.+.|+| ..+|+||.++++...|.+.|+||.--..++. +|..--.|.+... ..+...+.|.....
T Consensus 13 ~~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~~~~~~~~~~isf~v~~~---------d~~~a~~~l~~~~~- 82 (178)
T 2dtj_A 13 KSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPRS---------DGRRAMEILKKLQV- 82 (178)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCCCTTTCEEEEEEEEEHH---------HHHHHHHHHHTTTT-
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCCCCCCCCceEEEEEEccc---------cHHHHHHHHHHHHH-
Confidence 46888888 4699999999999999999999987665542 3322223666531 12333444544211
Q ss_pred CCCccceeeeCCCCceeEEEEEcC---CCcchHHHHHHHHHhCCCcEEEE
Q 024087 101 APSLRSSVGVMPTEEHTSIEFTGT---DRPGLFSEVCAVLADLHCNVVNA 147 (272)
Q Consensus 101 ~~~~~~~v~~~~~~~~T~Iev~~~---DRpGLL~~It~vL~~~g~~I~~A 147 (272)
.... ..+.. ..+...|.|.|. ++||+++++.++|++.|+||...
T Consensus 83 ~~~~-~~v~~--~~~~a~VsvVG~gm~~~~Gv~arif~aLa~~~InI~~i 129 (178)
T 2dtj_A 83 QGNW-TNVLY--DDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELI 129 (178)
T ss_dssp TTTC-SEEEE--ESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEE
T ss_pred hcCC-CeEEE--eCCeEEEEEEcCCcccCccHHHHHHHHHHHCCCCEEEE
Confidence 0011 11221 234667888886 89999999999999999999884
No 16
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=97.44 E-value=0.0055 Score=55.37 Aligned_cols=49 Identities=10% Similarity=0.104 Sum_probs=41.2
Q ss_pred CeEEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEe--cCCEEEEEEEEE
Q 024087 26 DATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS--DGGWFMDVFNVI 74 (272)
Q Consensus 26 ~~t~V~V~s~DrpGLl~~v~~vL~d~gl~I~~A~I~T--~gg~~~dvF~V~ 74 (272)
...+++|.|+|||||.+++++.|+++|+||.+++.++ ..|+|.-...+.
T Consensus 9 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~ 59 (292)
T 3lou_A 9 HQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSARFFVRCVFH 59 (292)
T ss_dssp CEEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEE
T ss_pred CcEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecCCCCceEEEEEEE
Confidence 3578999999999999999999999999999999996 457765444443
No 17
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=97.43 E-value=0.00043 Score=57.62 Aligned_cols=66 Identities=15% Similarity=0.235 Sum_probs=50.7
Q ss_pred eEEEEEcCCCcchHHHHHHHHHhCCCcEEEEEEEeeCC-eeEE-EEEEEeCCCCCCCCCHHHHHHHHHHhcccccC
Q 024087 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAA-VVHVTDHSTGYAIKDPKRLSTIKELLFNVLRG 190 (272)
Q Consensus 117 T~Iev~~~DRpGLL~~It~vL~~~g~~I~~A~i~T~g~-rv~d-vFyVtd~~~G~~i~d~~~l~~i~~~L~~~L~~ 190 (272)
..|.|...||||+|++|+.+|++.|+||.+..+.+..+ ...- +|-|.. +...+++|.++|.+....
T Consensus 4 ~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~~--------d~~~leqI~kqL~Kl~dV 71 (164)
T 2f1f_A 4 RILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVG--------DEKVLEQIEKQLHKLVDV 71 (164)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEES--------CHHHHHHHHHHHHHSTTE
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEec--------cHHHHHHHHHHHcCCCCE
Confidence 57899999999999999999999999999999875543 3333 344432 256788899998875543
No 18
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=97.43 E-value=0.0061 Score=54.95 Aligned_cols=114 Identities=11% Similarity=0.024 Sum_probs=66.6
Q ss_pred CeEEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEe--cCCEEEEEEEEEcCCCCCCCcHHHHHHHHHHHhcccCCCCC
Q 024087 26 DATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS--DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPS 103 (272)
Q Consensus 26 ~~t~V~V~s~DrpGLl~~v~~vL~d~gl~I~~A~I~T--~gg~~~dvF~V~d~~G~~~~~~~~~~~I~~aL~~~~~~~~~ 103 (272)
...+++|.|+|||||.+++++.|+++|+||.+++.++ ..|+|.-...+.. .+.. .+.|++.|..... .
T Consensus 6 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~-~~~~------~~~L~~~f~~la~---~ 75 (287)
T 3nrb_A 6 NQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSKFFMRVSVEI-PVAG------VNDFNSAFGKVVE---K 75 (287)
T ss_dssp TEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEEC-CC---------CHHHHHHHHHHG---G
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCeEEEEEEEEc-CCCC------HHHHHHHHHHHHH---H
Confidence 4578999999999999999999999999999999985 4677664444432 2211 1244444433210 0
Q ss_pred ccceeee--CCCCceeEEEEEcCCCcchHHHHHHHHHhCCCcEEEEEEEe
Q 024087 104 LRSSVGV--MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 151 (272)
Q Consensus 104 ~~~~v~~--~~~~~~T~Iev~~~DRpGLL~~It~vL~~~g~~I~~A~i~T 151 (272)
....+.+ .......++=+++.. --|.+|-....+-.+++.-+-|-+
T Consensus 76 ~~m~~~l~~~~~~~ri~vl~Sg~g--~nl~~ll~~~~~g~l~~~i~~Vis 123 (287)
T 3nrb_A 76 YNAEWWFRPRTDRKKVVIMVSKFD--HCLGDLLYRHRLGELDMEVVGIIS 123 (287)
T ss_dssp GTCEEEEEETTCCCEEEEEECSCC--HHHHHHHHHHHHTSSCCEEEEEEE
T ss_pred cCCeeEeeccCCCcEEEEEEeCCC--cCHHHHHHHHHCCCCCeEEEEEEe
Confidence 1112222 111223344444443 467777777766555544344444
No 19
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=97.35 E-value=0.0011 Score=54.71 Aligned_cols=110 Identities=13% Similarity=0.145 Sum_probs=73.8
Q ss_pred CCCeEEEEEEe-cCCCcHHHHHHHHHHhCCceEEEEEEEec---CCEEEEEEEEEcCCCCCCCcHHHHHHHHHHHhcccC
Q 024087 24 CADATVIKVDS-VNKHGILLQVIQVLNDVNLVIKKAYISSD---GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDAS 99 (272)
Q Consensus 24 ~~~~t~V~V~s-~DrpGLl~~v~~vL~d~gl~I~~A~I~T~---gg~~~dvF~V~d~~G~~~~~~~~~~~I~~aL~~~~~ 99 (272)
.++.+.|+|.+ +|+||.++++..+|.+.|+||.--..+.. .|..--.|.|...+. ++..+.|++ +.....
T Consensus 13 ~~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~q~~~~~~~g~~~isf~V~~~d~-----~~a~~~L~~-~~~~~~ 86 (167)
T 2dt9_A 13 DLDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGVPGHDPSRQQMAFTVKKDFA-----QEALEALEP-VLAEIG 86 (167)
T ss_dssp ECSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEEBCCCCSCTTEEEEEEEEEGGGH-----HHHHHHHHH-HHHHHC
T ss_pred eCCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEEcCCCCCCCCceEEEEEEehHHH-----HHHHHHHHH-HHHHhC
Confidence 34788888877 89999999999999999999987554422 344444577764221 122233333 211111
Q ss_pred CCCCccceeeeCCCCceeEEEEEcCC---CcchHHHHHHHHHhCCCcEEEE
Q 024087 100 FAPSLRSSVGVMPTEEHTSIEFTGTD---RPGLFSEVCAVLADLHCNVVNA 147 (272)
Q Consensus 100 ~~~~~~~~v~~~~~~~~T~Iev~~~D---RpGLL~~It~vL~~~g~~I~~A 147 (272)
. .+.. ..+...+.|.|.+ +||+++.+.++|++.|+||...
T Consensus 87 ----~--~v~~--~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~i 129 (167)
T 2dt9_A 87 ----G--EAIL--RPDIAKVSIVGVGLASTPEVPAKMFQAVASTGANIEMI 129 (167)
T ss_dssp ----C--EEEE--ECSEEEEEEEESSGGGSTHHHHHHHHHHHHTTCCCCEE
T ss_pred ----C--cEEE--eCCEEEEEEECCCcccCcCHHHHHHHHHHHCCCCEEEE
Confidence 1 1111 2346688899886 9999999999999999999443
No 20
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=97.21 E-value=0.001 Score=54.11 Aligned_cols=59 Identities=17% Similarity=0.111 Sum_probs=44.5
Q ss_pred EEEEEcCCCcchHHHHHHHHHhCCCcEEEEEEEeeCCeeEEEEEEEeCCCCCCCCCHHHHHHHHHHhcc
Q 024087 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFN 186 (272)
Q Consensus 118 ~Iev~~~DRpGLL~~It~vL~~~g~~I~~A~i~T~g~rv~dvFyVtd~~~G~~i~d~~~l~~i~~~L~~ 186 (272)
.|+|.+.||+|||++|+++|++.++||..+++.+.|. +|+.- + ..+...+..+...+..
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~~g~-----i~~~~-~----~~~~~~~~~L~~~l~~ 60 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPIGR-----IYLNF-A----ELEFESFSSLMAEIRR 60 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEETTTE-----EEEEE-C----CCCHHHHHHHHHHHHH
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEecCCE-----EEEEE-E----eCCHHHHHHHHHHHHc
Confidence 5899999999999999999999999999999977632 56654 2 2234455555555544
No 21
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=97.18 E-value=0.00026 Score=64.17 Aligned_cols=37 Identities=14% Similarity=0.306 Sum_probs=33.9
Q ss_pred ceeEEEEEcCCCcchHHHHHHHHHhCCCcEEEEEEEe
Q 024087 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 151 (272)
Q Consensus 115 ~~T~Iev~~~DRpGLL~~It~vL~~~g~~I~~A~i~T 151 (272)
..++|.+.|+||||+++.||.+|+++|+||..+.-.+
T Consensus 9 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~ 45 (292)
T 3lou_A 9 HQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFD 45 (292)
T ss_dssp CEEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CcEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEe
Confidence 4578999999999999999999999999999988765
No 22
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=97.14 E-value=0.0013 Score=54.76 Aligned_cols=66 Identities=11% Similarity=0.143 Sum_probs=50.8
Q ss_pred eEEEEEcCCCcchHHHHHHHHHhCCCcEEEEEEEeeC-Ce-eEEEEEEEeCCCCCCCCCHHHHHHHHHHhcccccC
Q 024087 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHN-DR-AAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRG 190 (272)
Q Consensus 117 T~Iev~~~DRpGLL~~It~vL~~~g~~I~~A~i~T~g-~r-v~dvFyVtd~~~G~~i~d~~~l~~i~~~L~~~L~~ 190 (272)
..|.+...||||+|++|+.+|++.|+||.+..+.+.. .. ..-+|-|.. +...+++|.++|.+....
T Consensus 5 ~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~--------d~~~leql~kQL~Kl~dV 72 (165)
T 2pc6_A 5 HIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNG--------PDEIVEQITKQLNKLIEV 72 (165)
T ss_dssp EEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEE--------CHHHHHHHHHHHHHSTTE
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEec--------cHHHHHHHHHHhcCCCCE
Confidence 4788999999999999999999999999999987544 23 333444433 256788899998875543
No 23
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=97.02 E-value=0.00061 Score=61.55 Aligned_cols=37 Identities=30% Similarity=0.482 Sum_probs=33.8
Q ss_pred ceeEEEEEcCCCcchHHHHHHHHHhCCCcEEEEEEEe
Q 024087 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 151 (272)
Q Consensus 115 ~~T~Iev~~~DRpGLL~~It~vL~~~g~~I~~A~i~T 151 (272)
..++|.+.|+||||+++.||.+|+++|+||..+.-.+
T Consensus 6 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~ 42 (287)
T 3nrb_A 6 NQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFN 42 (287)
T ss_dssp TEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeee
Confidence 4579999999999999999999999999999987754
No 24
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=97.00 E-value=0.0014 Score=61.17 Aligned_cols=48 Identities=27% Similarity=0.323 Sum_probs=40.9
Q ss_pred ceeEEEEEcCCCcchHHHHHHHHHhCCCcEEEEEEEeeCCeeEEEEEE
Q 024087 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHV 162 (272)
Q Consensus 115 ~~T~Iev~~~DRpGLL~~It~vL~~~g~~I~~A~i~T~g~rv~dvFyV 162 (272)
...+|.|.|+||||+++.|+.+|+++||||..+.-.+.+++..-...+
T Consensus 11 ~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~~~~f~~~~~~ 58 (415)
T 3p96_A 11 VSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVIRHRLTLGVLV 58 (415)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEETTEEEEEEEE
T ss_pred CeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEECCEeEEEEEE
Confidence 467999999999999999999999999999999988877765444444
No 25
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=96.99 E-value=0.0006 Score=61.60 Aligned_cols=37 Identities=22% Similarity=0.397 Sum_probs=33.6
Q ss_pred ceeEEEEEcCCCcchHHHHHHHHHhCCCcEEEEEEEe
Q 024087 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 151 (272)
Q Consensus 115 ~~T~Iev~~~DRpGLL~~It~vL~~~g~~I~~A~i~T 151 (272)
..++|.+.|+||||+++.||.+|+++|+||..+.-.+
T Consensus 5 ~~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~ 41 (288)
T 3obi_A 5 HQYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYN 41 (288)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeee
Confidence 3568999999999999999999999999999987754
No 26
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=96.99 E-value=0.00064 Score=61.39 Aligned_cols=38 Identities=13% Similarity=0.150 Sum_probs=34.2
Q ss_pred ceeEEEEEcCCCcchHHHHHHHHHhCCCcEEEEEEEee
Q 024087 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTH 152 (272)
Q Consensus 115 ~~T~Iev~~~DRpGLL~~It~vL~~~g~~I~~A~i~T~ 152 (272)
..++|.+.|+||||+++.||.+|+++|+||..+.-.+.
T Consensus 7 ~~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d 44 (286)
T 3n0v_A 7 DTWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDD 44 (286)
T ss_dssp CCEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred CcEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeecc
Confidence 35789999999999999999999999999999887653
No 27
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=96.90 E-value=0.0011 Score=60.42 Aligned_cols=38 Identities=18% Similarity=0.240 Sum_probs=34.5
Q ss_pred ceeEEEEEcCCCcchHHHHHHHHHhCCCcEEEEEEEee
Q 024087 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTH 152 (272)
Q Consensus 115 ~~T~Iev~~~DRpGLL~~It~vL~~~g~~I~~A~i~T~ 152 (272)
..++|.+.|+||||+++.||.+|+++|+||..+.-.+.
T Consensus 21 ~~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d 58 (302)
T 3o1l_A 21 RTFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSD 58 (302)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred ceEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEec
Confidence 35789999999999999999999999999999887754
No 28
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=96.89 E-value=0.0034 Score=53.46 Aligned_cols=67 Identities=13% Similarity=0.282 Sum_probs=50.6
Q ss_pred eeEEEEEcCCCcchHHHHHHHHHhCCCcEEEEEEE-eeCCeeEE-EEEEEeCCCCCCCCCHHHHHHHHHHhcccccC
Q 024087 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIW-THNDRAAA-VVHVTDHSTGYAIKDPKRLSTIKELLFNVLRG 190 (272)
Q Consensus 116 ~T~Iev~~~DRpGLL~~It~vL~~~g~~I~~A~i~-T~g~rv~d-vFyVtd~~~G~~i~d~~~l~~i~~~L~~~L~~ 190 (272)
...|.|...|+||.|++|+.+|++.|+||.+..+. |....... +|-|.. . ...+++|+++|..+...
T Consensus 29 ~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g-~-------e~~ieqL~kQL~KLidV 97 (193)
T 2fgc_A 29 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKG-D-------DKTIEQIEKQAYKLVEV 97 (193)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEE-C-------TTHHHHHHHHHTTSTTE
T ss_pred EEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEEC-C-------HHHHHHHHHHhcCcCce
Confidence 35899999999999999999999999999998886 44433333 344433 1 34678899999885543
No 29
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=96.67 E-value=0.016 Score=48.55 Aligned_cols=111 Identities=15% Similarity=0.233 Sum_probs=72.4
Q ss_pred CCeEEEEE-EecCCCcHHHHHHHHHHhCCceEEEEEEEe-c--CCEEEEEEEEEcCCCCCCCcHHHHHHHHHHHhcccCC
Q 024087 25 ADATVIKV-DSVNKHGILLQVIQVLNDVNLVIKKAYISS-D--GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASF 100 (272)
Q Consensus 25 ~~~t~V~V-~s~DrpGLl~~v~~vL~d~gl~I~~A~I~T-~--gg~~~dvF~V~d~~G~~~~~~~~~~~I~~aL~~~~~~ 100 (272)
++.+.|+| .-+|+||+++++..+|++.|++|.--..+. . .|..--.|.|...+..+ ..+.++.+.+.|..
T Consensus 14 ~~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~I~q~~s~~~~g~~~isftv~~~~~~~--a~~~L~~~~~el~~---- 87 (181)
T 3s1t_A 14 RSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRDVGPA--AVEKLDSLRNEIGF---- 87 (181)
T ss_dssp CSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCCEEECCCCTTTCEEEEEEEEETTTHHH--HHHHHHHTHHHHCC----
T ss_pred CCEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEEEEecCCcccCCccEEEEEEehhHHHH--HHHHHHHHHHhcCc----
Confidence 46677776 457999999999999999999997655432 2 56555567776432211 01122222222211
Q ss_pred CCCccceeeeCCCCceeEEEEEcC---CCcchHHHHHHHHHhCCCcEEEEE
Q 024087 101 APSLRSSVGVMPTEEHTSIEFTGT---DRPGLFSEVCAVLADLHCNVVNAE 148 (272)
Q Consensus 101 ~~~~~~~v~~~~~~~~T~Iev~~~---DRpGLL~~It~vL~~~g~~I~~A~ 148 (272)
..+.. ......|.+.|. ++||+.+.+.++|++.|+||....
T Consensus 88 -----~~v~~--~~~va~VsvVG~gm~~~~Gvaa~~f~aLa~~~InI~~Is 131 (181)
T 3s1t_A 88 -----SQLLY--DDHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS 131 (181)
T ss_dssp -----SEEEE--ESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred -----ceEEE--eCCEEEEEEEecccccCchHHHHHHHHHHHCCCcEEEEE
Confidence 11111 124557777766 899999999999999999998866
No 30
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=96.43 E-value=0.0051 Score=53.27 Aligned_cols=38 Identities=11% Similarity=0.286 Sum_probs=31.2
Q ss_pred eeEEEEEcCCCcchHHHHHHHHHhCCCcEEEEEEEeeC
Q 024087 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHN 153 (272)
Q Consensus 116 ~T~Iev~~~DRpGLL~~It~vL~~~g~~I~~A~i~T~g 153 (272)
...|++.+.||||+|++|+.+|+++++||...+..+..
T Consensus 4 ~VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~ 41 (223)
T 1y7p_A 4 LRGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIK 41 (223)
T ss_dssp CEEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECC
T ss_pred eEEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccc
Confidence 45789999999999999999999999999999998864
No 31
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=96.21 E-value=0.018 Score=47.66 Aligned_cols=130 Identities=14% Similarity=0.160 Sum_probs=78.3
Q ss_pred EEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEe-c-CCEEEEEEEEEcCCCCCCCcHHHHHHHHHHHhcccCCCCCcc
Q 024087 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS-D-GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLR 105 (272)
Q Consensus 28 t~V~V~s~DrpGLl~~v~~vL~d~gl~I~~A~I~T-~-gg~~~dvF~V~d~~G~~~~~~~~~~~I~~aL~~~~~~~~~~~ 105 (272)
..+.|...|+||+|++++++|++.|+||.+..+.. . .|...-+|.|. +. +..++.|.+.|......
T Consensus 4 ~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~---~d----~~~leqI~kqL~Kl~dV----- 71 (164)
T 2f1f_A 4 RILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTV---GD----EKVLEQIEKQLHKLVDV----- 71 (164)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEE---SC----HHHHHHHHHHHHHSTTE-----
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEe---cc----HHHHHHHHHHHcCCCCE-----
Confidence 46889999999999999999999999999998874 3 46666566665 22 45677777777764320
Q ss_pred cee-eeC----CCCceeEEEEEcCCCcchHHHHHHHHHhCCCcEEEEEEEeeCCeeEEEEEEEeCCCCCCCCCHHHHHHH
Q 024087 106 SSV-GVM----PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180 (272)
Q Consensus 106 ~~v-~~~----~~~~~T~Iev~~~DRpGLL~~It~vL~~~g~~I~~A~i~T~g~rv~dvFyVtd~~~G~~i~d~~~l~~i 180 (272)
..| ... -..+...+.|.+.. .--.+|.++..-.+..|... + .-.-++-+|+ ++++++.+
T Consensus 72 ~~V~r~~~~~~v~rEl~liKv~~~~--~~r~~i~~~~~~fra~ivdv-----~-~~~~~ie~tg--------~~~ki~~~ 135 (164)
T 2f1f_A 72 LRVSELGQGAHVEREIMLVKIQASG--YGRDEVKRNTEIFRGQIIDV-----T-PSLYTVQLAG--------TSGKLDAF 135 (164)
T ss_dssp EEEEEGGGSCEEEEEEEEEEEECCT--HHHHHHHHHHHHTTCEEEEE-----C-SSEEEEEEEE--------CHHHHHHH
T ss_pred EEEEEcCCcccceeEEEEEEEECCc--ccHHHHHHHHHHcCCEEEEE-----C-CCEEEEEEeC--------CHHHHHHH
Confidence 001 010 01234466666542 12345555555555555443 2 2233455665 25566655
Q ss_pred HHHhc
Q 024087 181 KELLF 185 (272)
Q Consensus 181 ~~~L~ 185 (272)
-+.|.
T Consensus 136 ~~~l~ 140 (164)
T 2f1f_A 136 LASIR 140 (164)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 55543
No 32
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=96.15 E-value=0.015 Score=49.76 Aligned_cols=122 Identities=16% Similarity=0.237 Sum_probs=75.1
Q ss_pred cCCCEEE-EEeCCCCCeEEEEEE-ecCCCcHHHHHHHHHHhCCceEEEEEEEe---cCCEEEEEEEEEcCCCCCCCcHHH
Q 024087 12 MNPPRVV-IDNNTCADATVIKVD-SVNKHGILLQVIQVLNDVNLVIKKAYISS---DGGWFMDVFNVIDCDGKKIRDKEV 86 (272)
Q Consensus 12 ~~~p~V~-i~n~~~~~~t~V~V~-s~DrpGLl~~v~~vL~d~gl~I~~A~I~T---~gg~~~dvF~V~d~~G~~~~~~~~ 86 (272)
|..|.|+ |. ..++.+.|+|. -+|+||+.+++..+|++.|+||---..++ .++...-.|.+...+..+ ..+.
T Consensus 21 mE~~vVtGIa--~~~~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~~~~~~~~sftv~~~d~~~--~~~~ 96 (200)
T 4go7_X 21 MEDPILTGVA--HDRSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRDVGPA--AVEK 96 (200)
T ss_dssp CCSCEEEEEE--EECSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEECCCCC--CCEEEEEEEEEGGGHHH--HHHH
T ss_pred cccCcEEEEE--ccCCEEEEEEecCCCCccHHHHHHHHHHHhCcceEEEeeccccccccceEEEEecchhhHHH--HHHH
Confidence 5555542 22 23467888886 48999999999999999999998654432 345555567776432110 0011
Q ss_pred HHHHHHHHhcccCCCCCccceeeeCCCCceeEEEEEc---CCCcchHHHHHHHHHhCCCcEEEEE
Q 024087 87 IDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTG---TDRPGLFSEVCAVLADLHCNVVNAE 148 (272)
Q Consensus 87 ~~~I~~aL~~~~~~~~~~~~~v~~~~~~~~T~Iev~~---~DRpGLL~~It~vL~~~g~~I~~A~ 148 (272)
++.+...+.. ..+.. ..+...|.+.| ..+||+.+.+.++|++.|+||..-.
T Consensus 97 l~~~~~~~~~---------~~v~~--~~~iakVSvVG~GM~~~~GVaak~F~aLa~~~INI~mIs 150 (200)
T 4go7_X 97 LDSLRNEIGF---------SQLLY--DDHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS 150 (200)
T ss_dssp HHTTHHHHCC---------SEEEE--ECCEEEEEEEEESCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred HHHHHhhhce---------eeEEE--ecCeeeeeeeccccccCCCcHHHHHHHHHHCCCCEEEEE
Confidence 1222222211 11111 12233455554 5899999999999999999998764
No 33
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=96.06 E-value=0.16 Score=47.71 Aligned_cols=109 Identities=18% Similarity=0.309 Sum_probs=72.5
Q ss_pred CeEEEEEE-ecCCCcHHHHHHHHHHhCCceEEEEEEEe-c--CCEEEEEEEEEcCCCCCCCcHHHHHHHHHHHhcccCCC
Q 024087 26 DATVIKVD-SVNKHGILLQVIQVLNDVNLVIKKAYISS-D--GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFA 101 (272)
Q Consensus 26 ~~t~V~V~-s~DrpGLl~~v~~vL~d~gl~I~~A~I~T-~--gg~~~dvF~V~d~~G~~~~~~~~~~~I~~aL~~~~~~~ 101 (272)
+.+.|+|. .+|+||.++++...|.+.|++|.--...| . .|...-.|.|...+. ++..+.|++ +.....
T Consensus 263 ~~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~s~~~~g~~~isf~v~~~~~-----~~a~~~l~~-~~~~~~-- 334 (421)
T 3ab4_A 263 SEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVFSVEDGTTDITFTCPRSDG-----RRAMEILKK-LQVQGN-- 334 (421)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECCCC--CCEEEEEEEEETTTH-----HHHHHHHHH-HHTTTT--
T ss_pred CEEEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccCccccCCcceEEEEEechhH-----HHHHHHHHH-HHHHcC--
Confidence 56778887 58999999999999999999998765544 2 454444577654211 122233333 222211
Q ss_pred CCccceeeeCCCCceeEEEEEcC---CCcchHHHHHHHHHhCCCcEEEE
Q 024087 102 PSLRSSVGVMPTEEHTSIEFTGT---DRPGLFSEVCAVLADLHCNVVNA 147 (272)
Q Consensus 102 ~~~~~~v~~~~~~~~T~Iev~~~---DRpGLL~~It~vL~~~g~~I~~A 147 (272)
. ..+.. ..+...+.|.|. ++||+++.+..+|.+.|+||...
T Consensus 335 --~-~~v~~--~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~i 378 (421)
T 3ab4_A 335 --W-TNVLY--DDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELI 378 (421)
T ss_dssp --C-SEEEE--ECCEEEEEEECGGGTSCTTHHHHHHHHHHHTTCCCCEE
T ss_pred --C-ceEEE--eCCeEEEEEEccCcccCccHHHHHHHHHHHCCCCEEEE
Confidence 0 11221 234557888875 89999999999999999999843
No 34
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=95.95 E-value=0.027 Score=46.72 Aligned_cols=130 Identities=11% Similarity=0.116 Sum_probs=79.3
Q ss_pred EEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEe-c-CCEEEEEEEEEcCCCCCCCcHHHHHHHHHHHhcccCCCCCcc
Q 024087 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS-D-GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLR 105 (272)
Q Consensus 28 t~V~V~s~DrpGLl~~v~~vL~d~gl~I~~A~I~T-~-gg~~~dvF~V~d~~G~~~~~~~~~~~I~~aL~~~~~~~~~~~ 105 (272)
..+.|...|+||+|++++++|++.|+||.+..+.. . .|..--+|.|.. . +..++.|.+.|....+.
T Consensus 5 ~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~---d----~~~leql~kQL~Kl~dV----- 72 (165)
T 2pc6_A 5 HIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNG---P----DEIVEQITKQLNKLIEV----- 72 (165)
T ss_dssp EEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEE---C----HHHHHHHHHHHHHSTTE-----
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEec---c----HHHHHHHHHHhcCCCCE-----
Confidence 46889999999999999999999999999998874 3 576665666652 1 45677787777764320
Q ss_pred cee-eeC----CCCceeEEEEEcCCCcchHHHHHHHHHhCCCcEEEEEEEeeCCeeEEEEEEEeCCCCCCCCCHHHHHHH
Q 024087 106 SSV-GVM----PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 180 (272)
Q Consensus 106 ~~v-~~~----~~~~~T~Iev~~~DRpGLL~~It~vL~~~g~~I~~A~i~T~g~rv~dvFyVtd~~~G~~i~d~~~l~~i 180 (272)
..| .+. -..+...+.|.+.. .--.+|.++..-.+..|.... .-.-++-+|. ++++++.+
T Consensus 73 ~~V~~~~~~~~v~rEl~liKv~~~~--~~r~~i~~~~~~fra~ivdv~------~~~~~ie~tg--------~~~ki~~~ 136 (165)
T 2pc6_A 73 VKLIDLSSEGYVERELMLVKVRAVG--KDREEMKRLADIFRGNIIDVT------NELYTIELTG--------TRSKLDGF 136 (165)
T ss_dssp EEEEEGGGSCEEEEEEEEEEEECCT--HHHHHHHHHHHHTTCEEEEEE------TTEEEEEEEE--------CHHHHHHH
T ss_pred EEEEEcCCcceeeeEEEEEEEeCCc--ccHHHHHHHHHHcCCEEEEEc------CCEEEEEEcC--------CHHHHHHH
Confidence 001 010 01234466666542 123556666555555555442 1233455665 25666655
Q ss_pred HHHhc
Q 024087 181 KELLF 185 (272)
Q Consensus 181 ~~~L~ 185 (272)
-+.|.
T Consensus 137 ~~~l~ 141 (165)
T 2pc6_A 137 LQAVD 141 (165)
T ss_dssp HHHSC
T ss_pred HHHhh
Confidence 55553
No 35
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=95.35 E-value=0.038 Score=47.84 Aligned_cols=48 Identities=17% Similarity=0.115 Sum_probs=36.1
Q ss_pred eEEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEec-----CCEEEEEEEEE
Q 024087 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD-----GGWFMDVFNVI 74 (272)
Q Consensus 27 ~t~V~V~s~DrpGLl~~v~~vL~d~gl~I~~A~I~T~-----gg~~~dvF~V~ 74 (272)
...+.|...||||+|++++.+|++++.||...+.+++ +|.+.-.+.+.
T Consensus 4 ~VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~kG~~ng~A~I~IEV~ 56 (223)
T 1y7p_A 4 LRGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIYFEIE 56 (223)
T ss_dssp CEEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECCSSTTTTEEEEEEEEC
T ss_pred eEEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccccCCcCCEEEEEEEEC
Confidence 3578899999999999999999999999999999984 46665444444
No 36
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=95.09 E-value=0.04 Score=44.43 Aligned_cols=60 Identities=10% Similarity=0.102 Sum_probs=43.7
Q ss_pred EEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCCCcHHHHHHHHHHHhcc
Q 024087 29 VIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETD 97 (272)
Q Consensus 29 ~V~V~s~DrpGLl~~v~~vL~d~gl~I~~A~I~T~gg~~~dvF~V~d~~G~~~~~~~~~~~I~~aL~~~ 97 (272)
.|.|.|.||+|++.+++++|++.++||....+.+. |. +++.-+. .+......|...+...
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~~-g~----i~~~~~~----~~~~~~~~L~~~l~~i 61 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPI-GR----IYLNFAE----LEFESFSSLMAEIRRI 61 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEETT-TE----EEEEECC----CCHHHHHHHHHHHHHS
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEecC-CE----EEEEEEe----CCHHHHHHHHHHHHcC
Confidence 47899999999999999999999999999999776 54 2222221 1223456666666554
No 37
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=94.95 E-value=0.24 Score=47.28 Aligned_cols=123 Identities=12% Similarity=0.205 Sum_probs=78.3
Q ss_pred CCeEEEEEEe---cCCCcHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCCCcHHHHHHHHHHH-------
Q 024087 25 ADATVIKVDS---VNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRL------- 94 (272)
Q Consensus 25 ~~~t~V~V~s---~DrpGLl~~v~~vL~d~gl~I~~A~I~T~gg~~~dvF~V~d~~G~~~~~~~~~~~I~~aL------- 94 (272)
++.+.|+|.+ .++||+++++..+|.+.|++|.--...+... --.|.|...+ .++..+.|++.+
T Consensus 316 ~~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~tse~--~Is~~V~~~d-----~~~a~~~L~~~l~~~~~~~ 388 (473)
T 3c1m_A 316 KNVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGSSET--NISLVVSEED-----VDKALKALKREFGDFGKKS 388 (473)
T ss_dssp EEEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEECCTTC--CEEEEEEGGG-----HHHHHHHHHHHHCC----C
T ss_pred CCeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEecCCCC--EEEEEEechH-----HHHHHHHHHHHHhhhcccc
Confidence 3677888886 6788999999999999999998776544322 2246665432 134556666655
Q ss_pred -hcccCCCCCccceeeeCCCCceeEEEEEcC---CCcchHHHHHHHHHhCCCcEEEEEEEeeCCeeEEEEEEEe
Q 024087 95 -ETDASFAPSLRSSVGVMPTEEHTSIEFTGT---DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164 (272)
Q Consensus 95 -~~~~~~~~~~~~~v~~~~~~~~T~Iev~~~---DRpGLL~~It~vL~~~g~~I~~A~i~T~g~rv~dvFyVtd 164 (272)
..... . ..+.. ..+...+.|.|. ++||.++.+.++|++.|+||.. .++|..-..+-+|.+
T Consensus 389 ~~~~~~----~-~~v~~--~~~~a~vsvVG~gm~~~~Gvaak~f~aL~~~~InI~m---isqgtSe~~Is~vV~ 452 (473)
T 3c1m_A 389 FLNNNL----I-RDVSV--DKDVCVISVVGAGMRGAKGIAGKIFTAVSESGANIKM---IAQGSSEVNISFVID 452 (473)
T ss_dssp TTSCCC----E-EEEEE--EEEEEEEEEECTTTTTCTTHHHHHHHHHHHHTCCCCE---EEESSCSSEEEEEEE
T ss_pred cccccc----c-ceEEE--eCCcEEEEEEecCCCCChhHHHHHHHHHHHCCCCEEE---EecCCCCceEEEEEc
Confidence 22100 0 01111 223557888886 5899999999999999999933 234433333334444
No 38
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=94.89 E-value=0.083 Score=41.83 Aligned_cols=35 Identities=23% Similarity=0.243 Sum_probs=31.6
Q ss_pred eEEEEEcCCCcchHHHHHHHHHhCCCcEEEEEEEe
Q 024087 117 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 151 (272)
Q Consensus 117 T~Iev~~~DRpGLL~~It~vL~~~g~~I~~A~i~T 151 (272)
..|.|..+|+||.|++|+.+|++.|+||....+..
T Consensus 7 ~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~ 41 (144)
T 2f06_A 7 KQLSIFLENKSGRLTEVTEVLAKENINLSALCIAE 41 (144)
T ss_dssp EEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred EEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEe
Confidence 47888899999999999999999999999887754
No 39
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=94.78 E-value=0.18 Score=42.69 Aligned_cols=130 Identities=16% Similarity=0.226 Sum_probs=82.0
Q ss_pred eEEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEE-e-cCCEEEEEEEEEcCCCCCCCcHHHHHHHHHHHhcccCCCCCc
Q 024087 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYIS-S-DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSL 104 (272)
Q Consensus 27 ~t~V~V~s~DrpGLl~~v~~vL~d~gl~I~~A~I~-T-~gg~~~dvF~V~d~~G~~~~~~~~~~~I~~aL~~~~~~~~~~ 104 (272)
.-.+.|...|+||.|++++++|+..|+||.+-.+. | +.|..--++.|... +...+.|.+.|..... .
T Consensus 29 ~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~-------e~~ieqL~kQL~KLid----V 97 (193)
T 2fgc_A 29 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGD-------DKTIEQIEKQAYKLVE----V 97 (193)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEEC-------TTHHHHHHHHHTTSTT----E
T ss_pred EEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECC-------HHHHHHHHHHhcCcCc----e
Confidence 35789999999999999999999999999998886 4 44655545666532 2356778877766422 0
Q ss_pred ccee-eeCC------CCceeEEEEEcCCCcchHHHHHHHHHhCCCcEEEEEEEeeCCeeEEEEEEEeCCCCCCCCCHHHH
Q 024087 105 RSSV-GVMP------TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 177 (272)
Q Consensus 105 ~~~v-~~~~------~~~~T~Iev~~~DRpGLL~~It~vL~~~g~~I~~A~i~T~g~rv~dvFyVtd~~~G~~i~d~~~l 177 (272)
..| .+.. ..+...+.|.+... -.+|.++..-.+..|.... .-.-++-+|. +++++
T Consensus 98 -ikV~dl~~~~~~~v~REl~LiKV~~~~~---r~ei~~i~~~fra~ivDv~------~~s~~iE~tG--------~~~ki 159 (193)
T 2fgc_A 98 -VKVTPIDPLPENRVEREMALIKVRFDED---KQEIFQLVEIFRGKIIDVS------REGAIIEITG--------ARSKV 159 (193)
T ss_dssp -EEEEECCSSGGGEEEEEEEEEEEECSSC---HHHHHHHHHHTTCEEEEEC------SSEEEEEEEE--------CHHHH
T ss_pred -EEEEEecCCCCccceeEEEEEEEeCCcC---HHHHHHHHHHcCCEEEEEc------CCEEEEEEcC--------CHHHH
Confidence 011 1111 11345677776542 6777777766666665542 2233455665 25666
Q ss_pred HHHHHHhc
Q 024087 178 STIKELLF 185 (272)
Q Consensus 178 ~~i~~~L~ 185 (272)
+.+-+.|.
T Consensus 160 ~a~i~~l~ 167 (193)
T 2fgc_A 160 EAFINLLP 167 (193)
T ss_dssp HHHHHHSC
T ss_pred HHHHHHhh
Confidence 66665554
No 40
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=94.30 E-value=0.52 Score=46.45 Aligned_cols=120 Identities=18% Similarity=0.272 Sum_probs=78.1
Q ss_pred CEEEEEeCCCCCeEEEEEEec---CCCcHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCCCcHHHHHHHH
Q 024087 15 PRVVIDNNTCADATVIKVDSV---NKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQ 91 (272)
Q Consensus 15 p~V~i~n~~~~~~t~V~V~s~---DrpGLl~~v~~vL~d~gl~I~~A~I~T~gg~~~dvF~V~d~~G~~~~~~~~~~~I~ 91 (272)
-.|.++ .+...|.|.+. .+||+.+++..+|.+.|+||.--. |..- -+ .|.|...+. ++..+.|.
T Consensus 347 ~~v~~~----~~~a~VsvVG~gm~~~~Gv~a~if~aL~~~~Ini~~is--tSe~-~I-s~vI~~~d~-----~~Av~aLh 413 (600)
T 3l76_A 347 AEIIVE----KGIAKIAIAGAGMIGRPGIAAKMFKTLADVGVNIEMIS--TSEV-KV-SCVIDQRDA-----DRAIAALS 413 (600)
T ss_dssp SEEEEE----CSEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCCCEEE--ECSS-EE-EEEEEGGGH-----HHHHHHHH
T ss_pred ceeEec----CCeEEEEEECCCcccCccHHHHHHHHHHhCCCcEEEEe--cCCC-EE-EEEEcHHHH-----HHHHHHHH
Confidence 355554 36899999987 689999999999999999997655 3222 22 355554321 23455566
Q ss_pred HHHhcccCCCCC------ccceeeeCCCCceeEEEEE-cCCCcchHHHHHHHHHhCCCcEEEE
Q 024087 92 QRLETDASFAPS------LRSSVGVMPTEEHTSIEFT-GTDRPGLFSEVCAVLADLHCNVVNA 147 (272)
Q Consensus 92 ~aL~~~~~~~~~------~~~~v~~~~~~~~T~Iev~-~~DRpGLL~~It~vL~~~g~~I~~A 147 (272)
+.+......+.+ .+.-.++....+.+.|.|. .+|+||+.++|...|++.|+||..-
T Consensus 414 ~~f~~~~t~~~~~~~~~~~~~v~Gia~~~~~a~i~i~~~~~~~g~~~~if~~La~~~I~vDmI 476 (600)
T 3l76_A 414 NAFGVTLSPPKNQTDTSHLPAVRGVALDQDQAQIAIRHVPDRPGMAAQLFTALAEANISVDMI 476 (600)
T ss_dssp HHTTCCBCCCCCCCC---CCSCCEEEEECSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCEE
T ss_pred HhhcccCCCccccccccccCceEEEEeeCCEEEEEEecCCCCccHHHHHHHHHHHcCCcEEEE
Confidence 666443110000 0111123344556677765 4899999999999999999999544
No 41
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=93.21 E-value=0.21 Score=46.87 Aligned_cols=60 Identities=15% Similarity=0.231 Sum_probs=48.2
Q ss_pred cCCCEEEEEeCCCCCeEEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEE
Q 024087 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVI 74 (272)
Q Consensus 12 ~~~p~V~i~n~~~~~~t~V~V~s~DrpGLl~~v~~vL~d~gl~I~~A~I~T~gg~~~dvF~V~ 74 (272)
.|.|.|.+... +...+.+.-.|+||.+..+..+|.++|+||...+..+.|+.++-++.|.
T Consensus 319 vn~p~~~~~~~---~~~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r~g~~A~~vidvD 378 (404)
T 1sc6_A 319 VNFPEVSLPLH---GGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDIE 378 (404)
T ss_dssp SSSCCCCCCCC---SSEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEECSSEEEEEEEEE
T ss_pred ecccccccCcC---CcceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccCCCCEEEEEEEcC
Confidence 45555543321 4567889999999999999999999999999999999999887666654
No 42
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=92.96 E-value=0.18 Score=47.68 Aligned_cols=59 Identities=22% Similarity=0.294 Sum_probs=48.3
Q ss_pred cCCCEEEEEeCCCCCeEEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEE
Q 024087 12 MNPPRVVIDNNTCADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFN 72 (272)
Q Consensus 12 ~~~p~V~i~n~~~~~~t~V~V~s~DrpGLl~~v~~vL~d~gl~I~~A~I~T~gg~~~dvF~ 72 (272)
.|-|.|.... ..+...|.+.-.|.||.|.++..+|++.|+||..-...|.|.+++-+.-
T Consensus 330 Vn~p~~~~~~--~~~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~~~~~~y~~~d 388 (416)
T 3k5p_A 330 VNFPQVQLPP--RPTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVGYLVME 388 (416)
T ss_dssp SSSCCCCCCC--CSSSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEE
T ss_pred eeCCCcCCCC--CCCceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccCCCceEEEEEE
Confidence 5666665532 3467899999999999999999999999999999998899888753333
No 43
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=92.70 E-value=0.47 Score=45.88 Aligned_cols=64 Identities=16% Similarity=0.264 Sum_probs=47.9
Q ss_pred CCceeEEEEEcCCCcchHHHHHHHHHhCCCcEEEEEEEeeC--CeeEEEEEEEeCCCCCCCCCHHHHHHHHH
Q 024087 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHN--DRAAAVVHVTDHSTGYAIKDPKRLSTIKE 182 (272)
Q Consensus 113 ~~~~T~Iev~~~DRpGLL~~It~vL~~~g~~I~~A~i~T~g--~rv~dvFyVtd~~~G~~i~d~~~l~~i~~ 182 (272)
...++.|-+.-.|+||.+..|+.+|.++|+||...++.... +.+.-++.+ | .++. ++.++.|++
T Consensus 451 ~~~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~v-d----~~~~-~~~l~~l~~ 516 (529)
T 1ygy_A 451 RAQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRL-D----QDVP-DDVRTAIAA 516 (529)
T ss_dssp ESCSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEE-S----SCCC-HHHHHHHHH
T ss_pred cCCccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEE-C----CCCC-HHHHHHHhc
Confidence 44577888889999999999999999999999999997654 334443433 2 3443 567777774
No 44
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=92.62 E-value=0.48 Score=42.38 Aligned_cols=58 Identities=17% Similarity=0.138 Sum_probs=46.2
Q ss_pred ceeEEEEEcCCCcchHHHHHHHHHhCCCcEEEEEEEeeCCe-eEEEEEEEeCCCCCCCCCHH
Q 024087 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR-AAAVVHVTDHSTGYAIKDPK 175 (272)
Q Consensus 115 ~~T~Iev~~~DRpGLL~~It~vL~~~g~~I~~A~i~T~g~r-v~dvFyVtd~~~G~~i~d~~ 175 (272)
..|.|-+..+|+||-|+++-.+|+.+|+|+.+.+-.-...+ ..-+|||.- .|.. .|+.
T Consensus 199 ~ktsl~f~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfvD~--eg~~-~d~~ 257 (283)
T 2qmx_A 199 QKTSIVFALPNEQGSLFRALATFALRGIDLTKIESRPSRKKAFEYLFYADF--IGHR-EDQN 257 (283)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTEEEEEEEE--ESCT-TSHH
T ss_pred ceEEEEEEcCCCCchHHHHHHHHHHcCCCeeEEEeeEcCCCCcceEEEEEE--ecCC-CcHH
Confidence 35677777789999999999999999999999998776655 778888854 4654 4443
No 45
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=92.42 E-value=0.72 Score=43.80 Aligned_cols=107 Identities=16% Similarity=0.299 Sum_probs=68.1
Q ss_pred CeEEEEEEe---cCCCcHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCCCcHHHHHHHHHHHhcccCCCC
Q 024087 26 DATVIKVDS---VNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAP 102 (272)
Q Consensus 26 ~~t~V~V~s---~DrpGLl~~v~~vL~d~gl~I~~A~I~T~gg~~~dvF~V~d~~G~~~~~~~~~~~I~~aL~~~~~~~~ 102 (272)
+.+.|+|.+ .+.||+++++..+|.+.|++|..- .+....+ .|.|...+-.+ ....+.+.+++.+...
T Consensus 297 ~~~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~i--~~~~~~i--s~~V~~~d~~~-~~~~~~~el~~~~~~~----- 366 (446)
T 3tvi_A 297 NFTVIAIEKALLNSEVGFCRKILSILEMYGVSFEHM--PSGVDSV--SLVIEDCKLDG-KCDKIIEEIKKQCNPD----- 366 (446)
T ss_dssp EEEEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEEB--CEETTEE--EEEEEHHHHTT-THHHHHHHHHHHSCCS-----
T ss_pred CEEEEEEEecCCCccHHHHHHHHHHHHHcCCcEEEE--ecCCCEE--EEEEecchHHH-HHHHHHHHHHHhcCCC-----
Confidence 566788886 589999999999999999999753 2322222 36665432111 0112333333332211
Q ss_pred CccceeeeCCCCceeEEEEEcC---CCcchHHHHHHHHHhCCCcEEEEE
Q 024087 103 SLRSSVGVMPTEEHTSIEFTGT---DRPGLFSEVCAVLADLHCNVVNAE 148 (272)
Q Consensus 103 ~~~~~v~~~~~~~~T~Iev~~~---DRpGLL~~It~vL~~~g~~I~~A~ 148 (272)
.+.. ..+...|.|.|. .+||+.+.+.++|++.|+||....
T Consensus 367 ----~v~v--~~~vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~mIs 409 (446)
T 3tvi_A 367 ----SIEI--HPNMALVATVGTGMAKTKGIANKIFTALSKENVNIRMID 409 (446)
T ss_dssp ----EEEE--EEEEEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEEEE
T ss_pred ----cEEE--eCCeEEEEEECCCccCChhHHHHHHHHHHHCCCCEEEEE
Confidence 1111 123557888876 589999999999999999997653
No 46
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=91.93 E-value=1.1 Score=40.90 Aligned_cols=61 Identities=15% Similarity=0.092 Sum_probs=43.9
Q ss_pred eEEEEEcC--CCcchHHHHHHHHHhCCCcEEEEEEEeeCCe-eEEEEEEEeCCCCCCCCCHHHHHHH
Q 024087 117 TSIEFTGT--DRPGLFSEVCAVLADLHCNVVNAEIWTHNDR-AAAVVHVTDHSTGYAIKDPKRLSTI 180 (272)
Q Consensus 117 T~Iev~~~--DRpGLL~~It~vL~~~g~~I~~A~i~T~g~r-v~dvFyVtd~~~G~~i~d~~~l~~i 180 (272)
+.+-+... |+||-|+++-.+|+.+|+|+.+.+-.....+ ..-+|||.- .|.. .|+...+.|
T Consensus 207 ts~i~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~--eg~~-~d~~v~~AL 270 (329)
T 3luy_A 207 ESVLTLIPLVTGPGVLANLLDVFRDAGLNMTSFISRPIKGRTGTYSFIVTL--DAAP-WEERFRDAL 270 (329)
T ss_dssp EEEEEEECSCCSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEEEEE--SSCT-TSHHHHHHH
T ss_pred eEEEEEecCCCCCCHHHHHHHHHHHCCcceEEEEeeECCCCCccEEEEEEE--eCCc-CCHHHHHHH
Confidence 44444444 7999999999999999999999998776665 567788754 4654 455433333
No 47
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=91.90 E-value=5.8 Score=38.91 Aligned_cols=118 Identities=17% Similarity=0.184 Sum_probs=74.7
Q ss_pred CCeEEEEEE-ecCCCcHHHHHHHHHHhCCceEEEEEEEe-c---CC--EEEEEEEEEcCCCCCCCcHHHHHHHHHHHhcc
Q 024087 25 ADATVIKVD-SVNKHGILLQVIQVLNDVNLVIKKAYISS-D---GG--WFMDVFNVIDCDGKKIRDKEVIDYIQQRLETD 97 (272)
Q Consensus 25 ~~~t~V~V~-s~DrpGLl~~v~~vL~d~gl~I~~A~I~T-~---gg--~~~dvF~V~d~~G~~~~~~~~~~~I~~aL~~~ 97 (272)
++.+.|+|. -+|+||+.+++.+.|++.|++|---..+. . +| ..--.|.|... ..+...+.|...
T Consensus 442 ~~~a~i~i~~~~~~~g~~~~if~~La~~~I~vDmI~q~~~~~~~~g~~~~~isftv~~~---------d~~~a~~~l~~~ 512 (600)
T 3l76_A 442 QDQAQIAIRHVPDRPGMAAQLFTALAEANISVDMIIQSQRCRINQGTPCRDIAFMVAEG---------DSSQAEAILQPL 512 (600)
T ss_dssp CSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCEEEEEEECCCSSSSCEEEEEEEEEHH---------HHHHHHHHHHHH
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHcCCcEEEEEecccccccCCCccceEEEEEeHH---------HHHHHHHHHHHH
Confidence 467778774 48999999999999999999995433332 1 24 33335776542 223334444332
Q ss_pred cCCCCCccceeeeCCCCceeEEEEEc---CCCcchHHHHHHHHHhCCCcEEEEEEEeeCCeeE
Q 024087 98 ASFAPSLRSSVGVMPTEEHTSIEFTG---TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAA 157 (272)
Q Consensus 98 ~~~~~~~~~~v~~~~~~~~T~Iev~~---~DRpGLL~~It~vL~~~g~~I~~A~i~T~g~rv~ 157 (272)
.. ... ...+.. ..+...|.+.| ..+||+.+.+.++|++.|+||.... |-.-+..
T Consensus 513 ~~-~~~-~~~v~~--~~~~akVSiVG~GM~~~~Gvaa~~f~aL~~~~Ini~mis--tSEi~Is 569 (600)
T 3l76_A 513 IK-DWL-DAAIVV--NKAIAKVSIVGSGMIGHPGVAAHFFAALAQENINIEMIA--TSEIKIS 569 (600)
T ss_dssp TT-TST-TCEEEE--ECCEEEEEEECGGGTTCTTHHHHHHHHHHTTTCCCCEEE--ECSSEEE
T ss_pred HH-hcC-CceEEE--eCCeEEEEEECcccccCccHHHHHHHHHHHCCCceEEEE--cCCceEE
Confidence 10 000 012222 23466788886 5999999999999999999997755 4443333
No 48
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=91.71 E-value=0.54 Score=41.70 Aligned_cols=59 Identities=20% Similarity=0.212 Sum_probs=46.1
Q ss_pred CceeEEEEEc---CCCcchHHHHHHHHHhCCCcEEEEEEEeeCCe-eEEEEEEEeCCCCCCCCCHHH
Q 024087 114 EEHTSIEFTG---TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR-AAAVVHVTDHSTGYAIKDPKR 176 (272)
Q Consensus 114 ~~~T~Iev~~---~DRpGLL~~It~vL~~~g~~I~~A~i~T~g~r-v~dvFyVtd~~~G~~i~d~~~ 176 (272)
...|.|-+.. .|+||-|+++-..|+.+|+|+.+.+-.....+ ..-.|||.- . .+.|+..
T Consensus 184 ~~ktsl~f~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~--e--~~~d~~v 246 (267)
T 2qmw_A 184 QNATSLMFLITPMHDKPGLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQA--D--SAITTDI 246 (267)
T ss_dssp SSCSEEEEEEEESSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTCEEEEEEE--S--CCSCHHH
T ss_pred CCeEEEEEEcCCCCCCcChHHHHHHHHHHcCCCeeEEEEeecCCCCccEEEEEEE--e--cCCcHHH
Confidence 3456777777 89999999999999999999999998776654 677888854 3 3455543
No 49
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=91.60 E-value=0.4 Score=44.94 Aligned_cols=48 Identities=15% Similarity=0.298 Sum_probs=41.9
Q ss_pred ceeEEEEEcCCCcchHHHHHHHHHhCCCcEEEEEEEeeCCeeEEEEEE
Q 024087 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHV 162 (272)
Q Consensus 115 ~~T~Iev~~~DRpGLL~~It~vL~~~g~~I~~A~i~T~g~rv~dvFyV 162 (272)
+...|-+.-.|+||.+..|+.+|.++|+||....+.+.|+.+.-++-+
T Consensus 330 ~~~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r~g~~A~~vidv 377 (404)
T 1sc6_A 330 GGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDI 377 (404)
T ss_dssp SSEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEECSSEEEEEEEE
T ss_pred CcceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccCCCCEEEEEEEc
Confidence 455677889999999999999999999999999999977777666655
No 50
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=91.25 E-value=0.91 Score=41.20 Aligned_cols=59 Identities=19% Similarity=0.254 Sum_probs=46.0
Q ss_pred ceeEEEEEcC-CCcchHHHHHHHHHhCCCcEEEEEEEeeCCe-eEEEEEEEeCCCCCCCCCHHH
Q 024087 115 EHTSIEFTGT-DRPGLFSEVCAVLADLHCNVVNAEIWTHNDR-AAAVVHVTDHSTGYAIKDPKR 176 (272)
Q Consensus 115 ~~T~Iev~~~-DRpGLL~~It~vL~~~g~~I~~A~i~T~g~r-v~dvFyVtd~~~G~~i~d~~~ 176 (272)
..|.|-+..+ |+||-|+++-.+|+.+|+|+.+.+-.-...+ ..-+|||.- .|.. .|+..
T Consensus 200 ~kTSl~f~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~--eg~~-~d~~v 260 (313)
T 3mwb_A 200 DKTTVVVPLPEDHPGALMEILDQFASRGVNLSRIESRPTGQYLGHYFFSIDA--DGHA-TDSRV 260 (313)
T ss_dssp EEEEEEEECSSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTSEEEEEEE--ESCT-TSHHH
T ss_pred CeEEEEEEeCCCCCCHHHHHHHHHHHCCccEEEEEEeecCCCCccEEEEEEE--eCCC-CcHHH
Confidence 4678888885 9999999999999999999999998766544 577888854 4654 45543
No 51
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=90.50 E-value=1.9 Score=40.53 Aligned_cols=51 Identities=18% Similarity=0.299 Sum_probs=44.4
Q ss_pred CCceeEEEEEcCCCcchHHHHHHHHHhCCCcEEEEEEEeeCCeeEEEEEEE
Q 024087 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT 163 (272)
Q Consensus 113 ~~~~T~Iev~~~DRpGLL~~It~vL~~~g~~I~~A~i~T~g~rv~dvFyVt 163 (272)
....+.|-+.-.|+||.|..|+.+|+++|+||..-...|.|+-+--++-|.
T Consensus 340 ~~~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~~~~~~y~~~d~~ 390 (416)
T 3k5p_A 340 RPTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVGYLVMEAD 390 (416)
T ss_dssp CSSSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEEC
T ss_pred CCCceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccCCCceEEEEEEec
Confidence 335679999999999999999999999999999999999998776666554
No 52
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=89.58 E-value=0.5 Score=44.93 Aligned_cols=52 Identities=15% Similarity=0.301 Sum_probs=37.3
Q ss_pred CCceeEEEEEcCCCcchHHHHHHHHHhCCCcEEEEEEEee--CCeeEEEEEEEe
Q 024087 113 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTH--NDRAAAVVHVTD 164 (272)
Q Consensus 113 ~~~~T~Iev~~~DRpGLL~~It~vL~~~g~~I~~A~i~T~--g~rv~dvFyVtd 164 (272)
....+-|.+...|+||.|++|+.+|.++|++|.+..=.-. ++..+.++.+|.
T Consensus 356 ~~~~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q~~~~~~~~~~~~v~~th 409 (444)
T 3mtj_A 356 VRTAYYLRLRAFDRPGVLADITRILADSSISIDAMVQKEPAEGEEQVDIILLTH 409 (444)
T ss_dssp CEEEEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEECC------CEEEEEEEC
T ss_pred cceeeEEEEEecCcccHHHHHHHHHHhcCCceeEEeecccccCCCCceEEEEec
Confidence 3446788999999999999999999999999988643211 112356677776
No 53
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=89.55 E-value=2 Score=41.36 Aligned_cols=62 Identities=16% Similarity=0.194 Sum_probs=48.0
Q ss_pred CeEEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEe--cCCEEEEEEEEEcCCCCCCCcHHHHHHHHH
Q 024087 26 DATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS--DGGWFMDVFNVIDCDGKKIRDKEVIDYIQQ 92 (272)
Q Consensus 26 ~~t~V~V~s~DrpGLl~~v~~vL~d~gl~I~~A~I~T--~gg~~~dvF~V~d~~G~~~~~~~~~~~I~~ 92 (272)
.+..+.+.-+|+||.+..+..+|.++|+||...++.. .+|.++-++.+.++ + +++..+.|++
T Consensus 453 ~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~vd~~----~-~~~~l~~l~~ 516 (529)
T 1ygy_A 453 QGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLDQD----V-PDDVRTAIAA 516 (529)
T ss_dssp CSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEESSC----C-CHHHHHHHHH
T ss_pred CccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEECCC----C-CHHHHHHHhc
Confidence 4567888999999999999999999999999999986 57777766665432 2 2446666654
No 54
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=86.89 E-value=2.3 Score=40.95 Aligned_cols=122 Identities=14% Similarity=0.213 Sum_probs=76.1
Q ss_pred CeEEEEEEe---cCCCcHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCCC-cHHHHHHHHHHHhcccCCC
Q 024087 26 DATVIKVDS---VNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIR-DKEVIDYIQQRLETDASFA 101 (272)
Q Consensus 26 ~~t~V~V~s---~DrpGLl~~v~~vL~d~gl~I~~A~I~T~gg~~~dvF~V~d~~G~~~~-~~~~~~~I~~aL~~~~~~~ 101 (272)
+.+.|+|.+ .++||+++++..+|.+.|++|..-. ++... -.|.|...+..... .++..+.+.+.|....
T Consensus 340 ~~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I~-sse~s---is~~v~~~~~~~~~~~~~~l~~~~~el~~~~--- 412 (510)
T 2cdq_A 340 NVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVVA-TSEVS---ISLTLDPSKLWSRELIQQELDHVVEELEKIA--- 412 (510)
T ss_dssp EEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEEE-EETTE---EEEEECCGGGSSSCCCHHHHHHHHHHHTTTS---
T ss_pred CeEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEEEE-eCCCe---EEEEEechHhhhhhHHHHHHHHHHHHhCCCC---
Confidence 567788886 6799999999999999999998763 22221 13555432211110 1234455555554311
Q ss_pred CCccceeeeCCCCceeEEEEEcC--CCcchHHHHHHHHHhCCCcEEEEEEEeeCCeeEEEEEEEe
Q 024087 102 PSLRSSVGVMPTEEHTSIEFTGT--DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164 (272)
Q Consensus 102 ~~~~~~v~~~~~~~~T~Iev~~~--DRpGLL~~It~vL~~~g~~I~~A~i~T~g~rv~dvFyVtd 164 (272)
.+.. ..+...|.+.|. ..||+.+.+..+|.+.|+||... +.|..-.++-+|.+
T Consensus 413 -----~v~~--~~~~a~VsiVG~m~~~~Gvaa~~f~aL~~~~InI~mI---sqGsSei~Is~vV~ 467 (510)
T 2cdq_A 413 -----VVNL--LKGRAIISLIGNVQHSSLILERAFHVLYTKGVNVQMI---SQGASKVNISFIVN 467 (510)
T ss_dssp -----EEEE--EEEEEEEEEEECGGGHHHHHHHHHHHHHHHTCCCSEE---EECTTCSEEEEEEE
T ss_pred -----eEEE--eCCcEEEEEEEECCCChhHHHHHHHHHHHCCCCEEEE---EecCCcceEEEEEe
Confidence 1111 123457777777 78999999999999999999765 34444334334444
No 55
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=85.88 E-value=0.57 Score=38.07 Aligned_cols=38 Identities=21% Similarity=0.318 Sum_probs=31.8
Q ss_pred CCCceeEEEEEc-CCCcchHHHHHHHHHhCCCcEEEEEE
Q 024087 112 PTEEHTSIEFTG-TDRPGLFSEVCAVLADLHCNVVNAEI 149 (272)
Q Consensus 112 ~~~~~T~Iev~~-~DRpGLL~~It~vL~~~g~~I~~A~i 149 (272)
...+.+.|.|.+ .|+||.+++|.++|+++|+||.....
T Consensus 21 ~~~~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~ 59 (167)
T 2re1_A 21 FDKNQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQ 59 (167)
T ss_dssp EECCCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEE
T ss_pred ecCCEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEc
Confidence 344567888885 89999999999999999999987654
No 56
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=81.16 E-value=0.98 Score=36.58 Aligned_cols=36 Identities=28% Similarity=0.396 Sum_probs=30.6
Q ss_pred CCceeEEEEEc-CCCcchHHHHHHHHHhCCCcEEEEE
Q 024087 113 TEEHTSIEFTG-TDRPGLFSEVCAVLADLHCNVVNAE 148 (272)
Q Consensus 113 ~~~~T~Iev~~-~DRpGLL~~It~vL~~~g~~I~~A~ 148 (272)
..+.+.|.|.+ +|+||.+++|..+|++.|+||....
T Consensus 13 ~~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~ 49 (167)
T 2dt9_A 13 DLDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMII 49 (167)
T ss_dssp ECSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEE
T ss_pred eCCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEE
Confidence 44567788876 8999999999999999999998754
No 57
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=80.45 E-value=3.3 Score=33.03 Aligned_cols=98 Identities=16% Similarity=0.135 Sum_probs=60.8
Q ss_pred CeEEEEEEe---cCCCcHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCCCcHHHHHHHHHHHhcccCCCC
Q 024087 26 DATVIKVDS---VNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAP 102 (272)
Q Consensus 26 ~~t~V~V~s---~DrpGLl~~v~~vL~d~gl~I~~A~I~T~gg~~~dvF~V~d~~G~~~~~~~~~~~I~~aL~~~~~~~~ 102 (272)
+.+.|+|.+ +++||..+++..+|++.|++|..-. +... --.|.|.+.+ ....+.+.|...
T Consensus 17 ~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~I~--~s~~--~Isf~v~~~~--------~~~~il~~l~~~----- 79 (157)
T 3mah_A 17 GITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDMVA--TSEV--GVSLTIDNDK--------NLPDIVRALSDI----- 79 (157)
T ss_dssp EEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSCEE--CCSS--EEEEEESCCT--------THHHHHHHHTTT-----
T ss_pred CEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEEEE--ecCC--EEEEEECChH--------HHHHHHHHHhcc-----
Confidence 678888885 4789999999999999999986443 2221 1235554321 112222333321
Q ss_pred CccceeeeCCCCceeEEEEEcC---CCcchHHHHHHHHHhCCCcEEEE
Q 024087 103 SLRSSVGVMPTEEHTSIEFTGT---DRPGLFSEVCAVLADLHCNVVNA 147 (272)
Q Consensus 103 ~~~~~v~~~~~~~~T~Iev~~~---DRpGLL~~It~vL~~~g~~I~~A 147 (272)
..+.. ..+...|.+.|. ++||+.+++..+|+ |+||...
T Consensus 80 ---~~v~~--~~~~a~vsvvG~gm~~~~gv~a~~f~aL~--~Ini~~i 120 (157)
T 3mah_A 80 ---GDVTV--DKDMVIICIVGDMEWDNVGFEARIINALK--GVPVRMI 120 (157)
T ss_dssp ---EEEEE--EEEEEEEEEEC------CCHHHHHHHTTT--TSCCSEE
T ss_pred ---CeEEE--eCCeEEEEEECCCcccCccHHHHHHHHhC--CCCeEEE
Confidence 11111 123457787775 68999999999999 8887764
No 58
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=78.10 E-value=2.3 Score=40.15 Aligned_cols=50 Identities=12% Similarity=0.097 Sum_probs=41.2
Q ss_pred ceeEEEEEcCCCcchHHHHHHHHHhCCCcEEEEEEEeeCC-eeEEEEEEEe
Q 024087 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTD 164 (272)
Q Consensus 115 ~~T~Iev~~~DRpGLL~~It~vL~~~g~~I~~A~i~T~g~-rv~dvFyVtd 164 (272)
..|.|-++.+|+||-|+++-.+|+.+|+|+.+.+.--... ...-.|||.-
T Consensus 33 dKTSLiFsl~n~pGAL~~~L~~Fa~~gINLTkIESRPsk~~~~eY~FfVD~ 83 (429)
T 1phz_A 33 GAISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFTYL 83 (429)
T ss_dssp CCEEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEEEEEECB
T ss_pred CeEEEEEEeCCCccHHHHHHHHHHHcCCceEEEEeeecCCCCccEEEEEEE
Confidence 4667777778999999999999999999999988866654 4677888843
No 59
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=78.04 E-value=4.3 Score=33.18 Aligned_cols=41 Identities=20% Similarity=0.204 Sum_probs=33.2
Q ss_pred CCCceeEEEEE-cCCCcchHHHHHHHHHhCCCcEEEEEEEee
Q 024087 112 PTEEHTSIEFT-GTDRPGLFSEVCAVLADLHCNVVNAEIWTH 152 (272)
Q Consensus 112 ~~~~~T~Iev~-~~DRpGLL~~It~vL~~~g~~I~~A~i~T~ 152 (272)
...+.+.|.|. ..|+||.+++|.++|++.|+||...-..+.
T Consensus 11 ~~~~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~~ 52 (178)
T 2dtj_A 11 TDKSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVS 52 (178)
T ss_dssp EECSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCC
T ss_pred ecCCEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 34456777774 689999999999999999999988765544
No 60
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=74.98 E-value=2.3 Score=35.93 Aligned_cols=38 Identities=24% Similarity=0.375 Sum_probs=30.8
Q ss_pred eCCCCceeEEEEEc-CCCcchHHHHHHHHHhCCCcEEEE
Q 024087 110 VMPTEEHTSIEFTG-TDRPGLFSEVCAVLADLHCNVVNA 147 (272)
Q Consensus 110 ~~~~~~~T~Iev~~-~DRpGLL~~It~vL~~~g~~I~~A 147 (272)
+....+.+.|.|.+ +|+||++++|..+|++.|+||..-
T Consensus 29 Ia~~~~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI 67 (200)
T 4go7_X 29 VAHDRSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMV 67 (200)
T ss_dssp EEEECSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCE
T ss_pred EEccCCEEEEEEecCCCCccHHHHHHHHHHHhCcceEEE
Confidence 33445566777764 799999999999999999999765
No 61
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=73.89 E-value=27 Score=31.57 Aligned_cols=51 Identities=20% Similarity=0.238 Sum_probs=34.1
Q ss_pred CCCcHHHHHHHHHHhCCceEEEEEEEe-cCCEEEEEEEEEcCCCCCCCcHHHHH
Q 024087 36 NKHGILLQVIQVLNDVNLVIKKAYISS-DGGWFMDVFNVIDCDGKKIRDKEVID 88 (272)
Q Consensus 36 DrpGLl~~v~~vL~d~gl~I~~A~I~T-~gg~~~dvF~V~d~~G~~~~~~~~~~ 88 (272)
|+||-|+++-+.|+..|+|..+-.-.- .++..--.|+| |.+|.. .++.+.+
T Consensus 217 ~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~Ffi-D~eg~~-~d~~v~~ 268 (329)
T 3luy_A 217 TGPGVLANLLDVFRDAGLNMTSFISRPIKGRTGTYSFIV-TLDAAP-WEERFRD 268 (329)
T ss_dssp CSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEEE-EESSCT-TSHHHHH
T ss_pred CCCCHHHHHHHHHHHCCcceEEEEeeECCCCCccEEEEE-EEeCCc-CCHHHHH
Confidence 799999999999999999998765442 33333335665 456653 3444333
No 62
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=72.27 E-value=8.6 Score=34.17 Aligned_cols=52 Identities=15% Similarity=0.151 Sum_probs=37.0
Q ss_pred CeEEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEe-c-CCEEEEEEEEEcCCCC
Q 024087 26 DATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS-D-GGWFMDVFNVIDCDGK 79 (272)
Q Consensus 26 ~~t~V~V~s~DrpGLl~~v~~vL~d~gl~I~~A~I~T-~-gg~~~dvF~V~d~~G~ 79 (272)
+.|-|.+..+|+||-|+++.+.|...|+|..+-.-.- . +-|-+ .|+|. .+|.
T Consensus 199 ~ktsl~f~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y-~FfvD-~eg~ 252 (283)
T 2qmx_A 199 QKTSIVFALPNEQGSLFRALATFALRGIDLTKIESRPSRKKAFEY-LFYAD-FIGH 252 (283)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTEE-EEEEE-EESC
T ss_pred ceEEEEEEcCCCCchHHHHHHHHHHcCCCeeEEEeeEcCCCCcce-EEEEE-EecC
Confidence 3566666668999999999999999999998765442 2 33444 46653 4554
No 63
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=67.65 E-value=20 Score=26.64 Aligned_cols=49 Identities=18% Similarity=0.106 Sum_probs=36.8
Q ss_pred CeEEEEEEecCCCcHHHHHHHHHHhCCce-EEEEEEEecCCEEEEEEEEEcCCCCCC
Q 024087 26 DATVIKVDSVNKHGILLQVIQVLNDVNLV-IKKAYISSDGGWFMDVFNVIDCDGKKI 81 (272)
Q Consensus 26 ~~t~V~V~s~DrpGLl~~v~~vL~d~gl~-I~~A~I~T~gg~~~dvF~V~d~~G~~~ 81 (272)
+.+.+.+...| +.++...|...|.. +...-.....|+. |++.|++|+.+
T Consensus 66 ~~~~l~f~v~d----vd~~~~~l~~~G~~~~~~~p~~~~~G~~---~~~~DPdGn~i 115 (128)
T 3g12_A 66 PSLQLGFQITD----LEKTVQELVKIPGAMCILDPTDMPDGKK---AIVLDPDGHSI 115 (128)
T ss_dssp CSEEEEEEESC----HHHHHHHHTTSTTCEEEEEEEECC-CEE---EEEECTTCCEE
T ss_pred CceEEEEEeCC----HHHHHHHHHHCCCceeccCceeCCCccE---EEEECCCCCEE
Confidence 45678888888 88899999999999 7765443444433 88999999964
No 64
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=66.51 E-value=11 Score=33.88 Aligned_cols=52 Identities=15% Similarity=0.238 Sum_probs=36.3
Q ss_pred CeEEEEEEec-CCCcHHHHHHHHHHhCCceEEEEEEEe--cCCEEEEEEEEEcCCCC
Q 024087 26 DATVIKVDSV-NKHGILLQVIQVLNDVNLVIKKAYISS--DGGWFMDVFNVIDCDGK 79 (272)
Q Consensus 26 ~~t~V~V~s~-DrpGLl~~v~~vL~d~gl~I~~A~I~T--~gg~~~dvF~V~d~~G~ 79 (272)
+.|-|.+..+ |+||-|+++.+.|...|+|..+-.-.- .+-|-+ .|+|. .+|.
T Consensus 200 ~kTSl~f~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y-~FfiD-~eg~ 254 (313)
T 3mwb_A 200 DKTTVVVPLPEDHPGALMEILDQFASRGVNLSRIESRPTGQYLGHY-FFSID-ADGH 254 (313)
T ss_dssp EEEEEEEECSSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTSE-EEEEE-EESC
T ss_pred CeEEEEEEeCCCCCCHHHHHHHHHHHCCccEEEEEEeecCCCCccE-EEEEE-EeCC
Confidence 4677777775 999999999999999999998655432 222333 35553 4454
No 65
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=65.96 E-value=12 Score=32.92 Aligned_cols=48 Identities=19% Similarity=0.111 Sum_probs=34.0
Q ss_pred CeEEEEEEe---cCCCcHHHHHHHHHHhCCceEEEEEEEe-cC-CEEEEEEEEE
Q 024087 26 DATVIKVDS---VNKHGILLQVIQVLNDVNLVIKKAYISS-DG-GWFMDVFNVI 74 (272)
Q Consensus 26 ~~t~V~V~s---~DrpGLl~~v~~vL~d~gl~I~~A~I~T-~g-g~~~dvF~V~ 74 (272)
+.|-|.+.. +|+||-|+++.+.|+..|+|..+-.-.- .+ -|-+ .|+|.
T Consensus 185 ~ktsl~f~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y-~FfiD 237 (267)
T 2qmw_A 185 NATSLMFLITPMHDKPGLLASVLNTFALFNINLSWIESRPLKTQLGMY-RFFVQ 237 (267)
T ss_dssp SCSEEEEEEEESSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTCE-EEEEE
T ss_pred CeEEEEEEcCCCCCCcChHHHHHHHHHHcCCCeeEEEEeecCCCCccE-EEEEE
Confidence 345555555 8999999999999999999998765442 22 2433 36654
No 66
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=65.45 E-value=21 Score=29.17 Aligned_cols=71 Identities=10% Similarity=0.090 Sum_probs=47.4
Q ss_pred CCCEEEEEeCCCCCeEEEEEEec---CCCcHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCCCcHHHHHH
Q 024087 13 NPPRVVIDNNTCADATVIKVDSV---NKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDY 89 (272)
Q Consensus 13 ~~p~V~i~n~~~~~~t~V~V~s~---DrpGLl~~v~~vL~d~gl~I~~A~I~T~gg~~~dvF~V~d~~G~~~~~~~~~~~ 89 (272)
..-.|.++ .+...|.|.+. +.||+.+++.++|.+.|+||.-.. +| .-.. .|.|...+. ++..+.
T Consensus 86 ~~~~v~~~----~~va~VsvVG~gm~~~~Gvaa~~f~aLa~~~InI~~Is-tS-ei~I--s~vV~~~d~-----~~Av~a 152 (181)
T 3s1t_A 86 GFSQLLYD----DHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS-TS-EIRI--SVLCRDTEL-----DKAVVA 152 (181)
T ss_dssp CCSEEEEE----SCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE-EE-TTEE--EEEEEGGGH-----HHHHHH
T ss_pred CcceEEEe----CCEEEEEEEecccccCchHHHHHHHHHHHCCCcEEEEE-cC-CCEE--EEEEeHHHH-----HHHHHH
Confidence 33456654 37889999887 799999999999999999998766 33 3222 255554322 234555
Q ss_pred HHHHHhc
Q 024087 90 IQQRLET 96 (272)
Q Consensus 90 I~~aL~~ 96 (272)
|.+++.-
T Consensus 153 LH~~f~l 159 (181)
T 3s1t_A 153 LHEAFGL 159 (181)
T ss_dssp HHHHHTC
T ss_pred HHHHHcC
Confidence 6666543
No 67
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=59.70 E-value=35 Score=31.53 Aligned_cols=37 Identities=22% Similarity=0.216 Sum_probs=30.2
Q ss_pred ceeEEEEE-cCCCcchHHHHHHHHHhCCCcEEEEEEEe
Q 024087 115 EHTSIEFT-GTDRPGLFSEVCAVLADLHCNVVNAEIWT 151 (272)
Q Consensus 115 ~~T~Iev~-~~DRpGLL~~It~vL~~~g~~I~~A~i~T 151 (272)
+.+.|.|. ..|+||.+++|.++|+++|+||......|
T Consensus 263 ~~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~ 300 (421)
T 3ab4_A 263 SEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNV 300 (421)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECC
T ss_pred CEEEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccC
Confidence 45567777 58999999999999999999998775433
No 68
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=57.84 E-value=16 Score=34.48 Aligned_cols=50 Identities=16% Similarity=0.334 Sum_probs=35.2
Q ss_pred CeEEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEec--CCEEEEEEEEEc
Q 024087 26 DATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSD--GGWFMDVFNVID 75 (272)
Q Consensus 26 ~~t~V~V~s~DrpGLl~~v~~vL~d~gl~I~~A~I~T~--gg~~~dvF~V~d 75 (272)
...-+.+...|+||.|++++++|.++|++|.+....-. ++....+..+++
T Consensus 358 ~~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q~~~~~~~~~~~~v~~th 409 (444)
T 3mtj_A 358 TAYYLRLRAFDRPGVLADITRILADSSISIDAMVQKEPAEGEEQVDIILLTH 409 (444)
T ss_dssp EEEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEECC------CEEEEEEEC
T ss_pred eeeEEEEEecCcccHHHHHHHHHHhcCCceeEEeecccccCCCCceEEEEec
Confidence 45577888999999999999999999999987654321 111245566665
No 69
>1rwu_A Hypothetical UPF0250 protein YBED; mixed alpha-beta fold, structural genomics, protein structure initiative, PSI; NMR {Escherichia coli} SCOP: d.58.54.1
Probab=49.73 E-value=81 Score=23.76 Aligned_cols=66 Identities=15% Similarity=0.126 Sum_probs=49.5
Q ss_pred CCeEEEEEEecCCCcHHHHHHHHHHhC---CceEEEEEEEecCCEEEEEEEEEcCCCCCCCcHHHHHHHHHHHhcc
Q 024087 25 ADATVIKVDSVNKHGILLQVIQVLNDV---NLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETD 97 (272)
Q Consensus 25 ~~~t~V~V~s~DrpGLl~~v~~vL~d~---gl~I~~A~I~T~gg~~~dvF~V~d~~G~~~~~~~~~~~I~~aL~~~ 97 (272)
+-.+.++|.+.+.+++...|..++..+ ++.+ ..+-++.|.+.--...|+ +.+++.+..|-++|...
T Consensus 34 Pc~y~~KvIG~a~~~~~~~V~~vv~~~~p~d~~~-~~r~Ss~GkY~Svtv~v~------v~S~eQv~aiY~~L~~~ 102 (109)
T 1rwu_A 34 PTPFTYKVMGQALPELVDQVVEVVQRHAPGDYTP-TVKPSSKGNYHSVSITIN------ATHIEQVETLYEELGKI 102 (109)
T ss_dssp CCCEEEEEEEECCTTHHHHHHHHHHHHSSSCCCE-EEEESSCSSEEEEEEEEC------CSSHHHHHHHHHHHSCS
T ss_pred CCCceEEEEEECcHHHHHHHHHHHHHhCCCCCCc-eecCCCCCeEEEEEEEEE------ECCHHHHHHHHHHHhcC
Confidence 346899999999999999999999988 7887 446666777665444443 34456778888888764
No 70
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=47.43 E-value=61 Score=23.78 Aligned_cols=49 Identities=16% Similarity=0.192 Sum_probs=34.5
Q ss_pred eeEEEEEcCCCcchHHHHHHHHHhCCCc-EEEEEEEeeCCeeEEEEEEEeCCCCCCCC
Q 024087 116 HTSIEFTGTDRPGLFSEVCAVLADLHCN-VVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172 (272)
Q Consensus 116 ~T~Iev~~~DRpGLL~~It~vL~~~g~~-I~~A~i~T~g~rv~dvFyVtd~~~G~~i~ 172 (272)
++.+-+...| +.+..+-|.++|+. +...-.....++ - ||+.| +.|+.|.
T Consensus 67 ~~~l~f~v~d----vd~~~~~l~~~G~~~~~~~p~~~~~G~--~-~~~~D-PdGn~ie 116 (128)
T 3g12_A 67 SLQLGFQITD----LEKTVQELVKIPGAMCILDPTDMPDGK--K-AIVLD-PDGHSIE 116 (128)
T ss_dssp SEEEEEEESC----HHHHHHHHTTSTTCEEEEEEEECC-CE--E-EEEEC-TTCCEEE
T ss_pred ceEEEEEeCC----HHHHHHHHHHCCCceeccCceeCCCcc--E-EEEEC-CCCCEEE
Confidence 4567777778 88999999999999 765333222222 2 89999 8898763
No 71
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=46.48 E-value=12 Score=29.72 Aligned_cols=47 Identities=9% Similarity=0.070 Sum_probs=33.6
Q ss_pred CceeEEEEEc---CCCcchHHHHHHHHHhCCCcEEEEEEEeeCCeeEEEEEEEe
Q 024087 114 EEHTSIEFTG---TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164 (272)
Q Consensus 114 ~~~T~Iev~~---~DRpGLL~~It~vL~~~g~~I~~A~i~T~g~rv~dvFyVtd 164 (272)
.+.+.|.|.+ .++||.+++|..+|++.|++|.... | ++ ..-.|+|.+
T Consensus 16 ~~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~I~--~-s~-~~Isf~v~~ 65 (157)
T 3mah_A 16 DGITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDMVA--T-SE-VGVSLTIDN 65 (157)
T ss_dssp EEEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSCEE--C-CS-SEEEEEESC
T ss_pred CCEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEEEE--e-cC-CEEEEEECC
Confidence 3456788874 4789999999999999999996543 3 22 234465644
No 72
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=46.34 E-value=14 Score=29.03 Aligned_cols=44 Identities=18% Similarity=0.292 Sum_probs=34.6
Q ss_pred eeEEEEEcC---CCcchHHHHHHHHHhCCCcEEEEEEEeeCCeeEEEEEEEe
Q 024087 116 HTSIEFTGT---DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164 (272)
Q Consensus 116 ~T~Iev~~~---DRpGLL~~It~vL~~~g~~I~~A~i~T~g~rv~dvFyVtd 164 (272)
.-.|.|.+. |-.|+++.|+..|++.|++|.. |+|+. .|.++|..
T Consensus 62 wr~i~v~~~l~~~~vGilA~is~pLA~agIsif~--iSty~---tD~IlVp~ 108 (134)
T 1zhv_A 62 WSCFKFQGPFAFDETGIVLSVISPLSTNGIGIFV--VSTFD---GDHLLVRS 108 (134)
T ss_dssp EEEEEECSCCCCSSCCHHHHHHHHHHTTTCCCEE--EECSS---CEEEEEEG
T ss_pred eEEEEEecCCCccHHHHHHHHHHHHHhCCCCeEE--EEecc---ccEEEEeH
Confidence 345666655 8899999999999999999875 56665 57788865
No 73
>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}
Probab=42.26 E-value=74 Score=24.07 Aligned_cols=47 Identities=19% Similarity=0.097 Sum_probs=34.2
Q ss_pred EEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCC
Q 024087 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKI 81 (272)
Q Consensus 28 t~V~V~s~DrpGLl~~v~~vL~d~gl~I~~A~I~T~gg~~~dvF~V~d~~G~~~ 81 (272)
.-+.+...| +.++...|...|+.|...-.....|+ .|++.|++|+.+
T Consensus 67 ~hl~f~V~d----~d~~~~~l~~~G~~v~~~p~~~~~G~---~~~~~DPdG~~i 113 (144)
T 3r6a_A 67 TQATFLVDS----LDKFKTFLEENGAEIIRGPSKVPTGR---NMTVRHSDGSVI 113 (144)
T ss_dssp CCEEEEESC----HHHHHHHHHHTTCEEEEEEEEETTEE---EEEEECTTSCEE
T ss_pred eEEEEEeCC----HHHHHHHHHHcCCEEecCCccCCCce---EEEEECCCCCEE
Confidence 334455555 67788899999999987765555553 478999999964
No 74
>1ib8_A Conserved protein SP14.3; nucleic acid binding protein, ribosomal protein, essential gene, structural genomics; NMR {Streptococcus pneumoniae} SCOP: b.38.2.1 d.52.4.1
Probab=39.97 E-value=1.3e+02 Score=24.06 Aligned_cols=95 Identities=13% Similarity=0.074 Sum_probs=54.6
Q ss_pred HHHHHHHHHHhCCceEEEEEEEec-CCEEEEEEEEEcCCCCCCCcHHHHHHHHHHHhcccCCCCCccceeeeCCCCceeE
Q 024087 40 ILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTS 118 (272)
Q Consensus 40 Ll~~v~~vL~d~gl~I~~A~I~T~-gg~~~dvF~V~d~~G~~~~~~~~~~~I~~aL~~~~~~~~~~~~~v~~~~~~~~T~ 118 (272)
+..-+..++.. |+.+.+..+... ++|.+-+|. -.+.|-.+ +-++.+-+.|.....-.. .++-...|.
T Consensus 14 v~~li~p~~~~-g~eLvdve~~~~g~~~~LrV~I-D~~~gi~l---ddC~~vSr~is~~LD~~~-------~d~i~~~Y~ 81 (164)
T 1ib8_A 14 VREVVEPVIEA-PFELVDIEYGKIGSDMILSIFV-DKPEGITL---NDTADLTEMISPVLDTIK-------PDPFPEQYF 81 (164)
T ss_dssp HHHHHHHHHCS-SSEEEEEEEEEETTEEEEEEEE-ECSSCCCH---HHHHHHHHHHGGGTTTCC-------SCCCCSCEE
T ss_pred HHHHHHHHHcC-CcEEEEEEEEecCCCcEEEEEE-ECCCCCCH---HHHHHHHHHHHHHhcccc-------ccCCCCCeE
Confidence 33445566667 999999999874 467776554 33444333 346666666666532000 023346789
Q ss_pred EEEEcC--CCcchHHHHHHHHHhCCCcEEEEEEEe
Q 024087 119 IEFTGT--DRPGLFSEVCAVLADLHCNVVNAEIWT 151 (272)
Q Consensus 119 Iev~~~--DRpGLL~~It~vL~~~g~~I~~A~i~T 151 (272)
|||+++ |||= ......-+-.|-. ++|.+
T Consensus 82 LEVSSPGldRpL--~~~~df~r~~G~~---V~V~l 111 (164)
T 1ib8_A 82 LEITSPGLERPL--KTKDAVAGAVGKY---IHVGL 111 (164)
T ss_dssp EEEECCSSSSCC--SSHHHHHHHCSEE---EEEEC
T ss_pred EEEeCCCCCCCC--CCHHHHHHhCCcE---EEEEE
Confidence 999965 7873 3333444444433 34555
No 75
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=38.60 E-value=34 Score=32.19 Aligned_cols=48 Identities=10% Similarity=0.075 Sum_probs=35.8
Q ss_pred CCeEEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEe--cCCEEEEEEEE
Q 024087 25 ADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS--DGGWFMDVFNV 73 (272)
Q Consensus 25 ~~~t~V~V~s~DrpGLl~~v~~vL~d~gl~I~~A~I~T--~gg~~~dvF~V 73 (272)
.+.|-|.+..+|+||-|+++.++|+..|+|+.+-.-.- .+.|-+ .|+|
T Consensus 32 ~dKTSLiFsl~n~pGAL~~~L~~Fa~~gINLTkIESRPsk~~~~eY-~FfV 81 (429)
T 1phz_A 32 NGAISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEY-EFFT 81 (429)
T ss_dssp SCCEEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEE-EEEE
T ss_pred CCeEEEEEEeCCCccHHHHHHHHHHHcCCceEEEEeeecCCCCccE-EEEE
Confidence 35677777779999999999999999999998655432 334544 3555
No 76
>1zvp_A Hypothetical protein VC0802; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 2.20A {Vibrio cholerae} SCOP: d.58.18.9 d.58.18.9
Probab=36.53 E-value=41 Score=26.30 Aligned_cols=44 Identities=18% Similarity=0.102 Sum_probs=33.2
Q ss_pred eeEEEEEc---CCCcchHHHHHHHHHhCCCcEEEEEEEeeCCeeEEEEEEEe
Q 024087 116 HTSIEFTG---TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164 (272)
Q Consensus 116 ~T~Iev~~---~DRpGLL~~It~vL~~~g~~I~~A~i~T~g~rv~dvFyVtd 164 (272)
.-.|.|.+ -|-.|+++.|+..|++.|++|.. |+|+. .|.++|..
T Consensus 71 wr~i~l~~~~~l~~vGi~a~is~~LA~agIsif~--iSty~---tDhIlVp~ 117 (133)
T 1zvp_A 71 FSLITLTVHSSLEAVGLTAAFATKLAEHGISANV--IAGYY---HDHIFVQK 117 (133)
T ss_dssp EEEEEEECCC--CCSCHHHHHHHHHHHTTCCCEE--EECSS---CEEEEEEG
T ss_pred eEEEEEeccCCccHHHHHHHHHHHHHhCCCCcEE--EEecc---ccEEEEeh
Confidence 33555554 59999999999999999999875 55655 57777754
No 77
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=36.53 E-value=1.5e+02 Score=27.78 Aligned_cols=58 Identities=17% Similarity=0.216 Sum_probs=41.6
Q ss_pred cCCCEEEEEeCCCCCeEEEEEEec---CCCcHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEc
Q 024087 12 MNPPRVVIDNNTCADATVIKVDSV---NKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVID 75 (272)
Q Consensus 12 ~~~p~V~i~n~~~~~~t~V~V~s~---DrpGLl~~v~~vL~d~gl~I~~A~I~T~gg~~~dvF~V~d 75 (272)
.++-.|.++. +...|.|.+. +.||+.+++..+|.+.|+||.--...|..-.. .|.|..
T Consensus 363 ~~~~~v~v~~----~vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~mIsqgtSei~I--s~vV~~ 423 (446)
T 3tvi_A 363 CNPDSIEIHP----NMALVATVGTGMAKTKGIANKIFTALSKENVNIRMIDQGSSEINV--IVGVET 423 (446)
T ss_dssp SCCSEEEEEE----EEEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEEEEECSCTTEE--EEEEEG
T ss_pred cCCCcEEEeC----CeEEEEEECCCccCChhHHHHHHHHHHHCCCCEEEEEecCCCceE--EEEEcH
Confidence 4444666654 6889999987 48999999999999999999866544433222 255554
No 78
>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}
Probab=34.38 E-value=68 Score=23.57 Aligned_cols=39 Identities=18% Similarity=0.279 Sum_probs=29.4
Q ss_pred HHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCC
Q 024087 40 ILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKI 81 (272)
Q Consensus 40 Ll~~v~~vL~d~gl~I~~A~I~T~gg~~~dvF~V~d~~G~~~ 81 (272)
=+..+...|...|+.+...-.....|+ .+++.|++|+.+
T Consensus 108 d~~~~~~~l~~~G~~~~~~~~~~~~g~---~~~~~DPdG~~i 146 (156)
T 3kol_A 108 LFDRAVTVIGENKIAIAHGPVTRPTGR---GVYFYDPDGFMI 146 (156)
T ss_dssp GHHHHHHHHHHTTCCEEEEEEEC-CCE---EEEEECTTSCEE
T ss_pred HHHHHHHHHHHCCCccccCceecCCcc---EEEEECCCCCEE
Confidence 477888889999999987655544554 578999999864
No 79
>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}
Probab=32.79 E-value=1.2e+02 Score=22.68 Aligned_cols=38 Identities=11% Similarity=-0.026 Sum_probs=29.0
Q ss_pred HHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCC
Q 024087 41 LLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKI 81 (272)
Q Consensus 41 l~~v~~vL~d~gl~I~~A~I~T~gg~~~dvF~V~d~~G~~~ 81 (272)
+..+...|...|..|...-....+|+. ++++||+|+.+
T Consensus 109 vda~~~~l~~~Gv~~~~~p~~~~~g~~---~~f~DPdGn~i 146 (155)
T 4g6x_A 109 IAAEYERLSALGVRFTQEPTDMGPVVT---AILDDTCGNLI 146 (155)
T ss_dssp HHHHHHHHHHTTCCEEEEEEECSSCEE---EEEECSSSCEE
T ss_pred hhhhhhHHhcCCcEEeeCCEEcCCeEE---EEEECCCCCEE
Confidence 567788899999999877655555654 56899999965
No 80
>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2
Probab=30.21 E-value=1.2e+02 Score=21.18 Aligned_cols=49 Identities=16% Similarity=0.231 Sum_probs=33.8
Q ss_pred eEEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCC
Q 024087 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKI 81 (272)
Q Consensus 27 ~t~V~V~s~DrpGLl~~v~~vL~d~gl~I~~A~I~T~gg~~~dvF~V~d~~G~~~ 81 (272)
...+.+...| +..+...|.+.|+.|...-.....| .-.+++.|++|+.+
T Consensus 64 ~~~~~~~v~d----~~~~~~~l~~~G~~~~~~~~~~~~g--~~~~~~~DPdG~~i 112 (118)
T 2i7r_A 64 GIIIHIEVED----VDQNYKRLNELGIKVLHGPTVTDWG--TESLLVQGPAGLVL 112 (118)
T ss_dssp CEEEEEECSC----HHHHHHHHHHHTCCEEEEEEECTTS--CEEEEEECGGGCEE
T ss_pred eEEEEEEECC----HHHHHHHHHHCCCceecCCccccCc--cEEEEEECCCccEE
Confidence 3456666665 7778888899999987654434333 22467899999864
No 81
>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}
Probab=30.01 E-value=67 Score=23.61 Aligned_cols=48 Identities=17% Similarity=0.302 Sum_probs=32.6
Q ss_pred eeEEEEEcCCCcchHHHHHHHHHhCCCcEEEEEEEeeCCeeEEEEEEEeCCCCCCC
Q 024087 116 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 171 (272)
Q Consensus 116 ~T~Iev~~~DRpGLL~~It~vL~~~g~~I~~A~i~T~g~rv~dvFyVtd~~~G~~i 171 (272)
+..++|...| +.++.+.|.+.|+.+...-....+++ .+|+.| ..|..|
T Consensus 99 h~~~~v~~~d----~~~~~~~l~~~G~~~~~~~~~~~~g~---~~~~~D-PdG~~i 146 (156)
T 3kol_A 99 HLAFDIDPQL----FDRAVTVIGENKIAIAHGPVTRPTGR---GVYFYD-PDGFMI 146 (156)
T ss_dssp EEEEECCGGG----HHHHHHHHHHTTCCEEEEEEEC-CCE---EEEEEC-TTSCEE
T ss_pred EEEEEecHHH----HHHHHHHHHHCCCccccCceecCCcc---EEEEEC-CCCCEE
Confidence 4455552223 77788889999999976654443332 789999 888876
No 82
>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}
Probab=29.72 E-value=92 Score=21.91 Aligned_cols=39 Identities=18% Similarity=0.244 Sum_probs=28.2
Q ss_pred HHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCC
Q 024087 41 LLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKI 81 (272)
Q Consensus 41 l~~v~~vL~d~gl~I~~A~I~T~gg~~~dvF~V~d~~G~~~ 81 (272)
+..+...|...|+.+...-.....|+ -.++++|++|+.+
T Consensus 85 v~~~~~~l~~~G~~~~~~~~~~~~g~--~~~~~~DPdG~~i 123 (127)
T 3e5d_A 85 VDELTEKLRQDGFAIAGEPRMTGDGY--YESVVLDPEGNRI 123 (127)
T ss_dssp HHHHHHHHHHTTCCEEEEEEECTTSC--EEEEEECTTSCEE
T ss_pred HHHHHHHHHHcCCeEecCcccCCCCc--EEEEEECCCCCEE
Confidence 66788889999999987644343442 2367899999864
No 83
>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}
Probab=29.13 E-value=93 Score=23.07 Aligned_cols=50 Identities=16% Similarity=0.148 Sum_probs=33.4
Q ss_pred ceeEEEEEcCCCcchHHHHHHHHHhCCCcEEEEEEEeeCCeeEEEEEEEeCCCCCCC
Q 024087 115 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 171 (272)
Q Consensus 115 ~~T~Iev~~~DRpGLL~~It~vL~~~g~~I~~A~i~T~g~rv~dvFyVtd~~~G~~i 171 (272)
.+..+.+...| +.++.+.|.+.|+.+........+ ....||+.| +.|..|
T Consensus 87 ~h~~~~v~~~d----ld~~~~~l~~~G~~~~~~~~~~~~--~~~~~~~~D-PdG~~i 136 (141)
T 3ghj_A 87 QHFSFRVEKSE----IEPLKKALESKGVSVHGPVNQEWM--QAVSLYFAD-PNGHAL 136 (141)
T ss_dssp CEEEEEECGGG----HHHHHHHHHHTTCCCEEEEEEGGG--TEEEEEEEC-TTCCEE
T ss_pred ceEEEEEeHHH----HHHHHHHHHHCCCeEeCCcccCCC--CceEEEEEC-CCCCEE
Confidence 35566664223 778888999999999833222222 245799999 888865
No 84
>2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A*
Probab=27.67 E-value=28 Score=32.74 Aligned_cols=120 Identities=17% Similarity=0.208 Sum_probs=70.3
Q ss_pred CeEEEEEEec---CCCcHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCCCcHHHHHHHHHHHhcccCCCC
Q 024087 26 DATVIKVDSV---NKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAP 102 (272)
Q Consensus 26 ~~t~V~V~s~---DrpGLl~~v~~vL~d~gl~I~~A~I~T~gg~~~dvF~V~d~~G~~~~~~~~~~~I~~aL~~~~~~~~ 102 (272)
+.+.|+|.+. +.+|+++++..+|.+.|++|..-. ++. . --.|.|...+...-......+.+.+.|....
T Consensus 307 ~~~~i~i~~~~m~~~~g~~~~if~~l~~~~i~vd~i~-ss~-~--sis~~v~~~~~~~~~~~~~~~~~~~el~~~~---- 378 (449)
T 2j0w_A 307 NQTLLTLHSLNMLHSRGFLAEVFGILARHNISVDLIT-TSE-V--SVALTLDTTGSTSTGDTLLTQSLLMELSALC---- 378 (449)
T ss_dssp EEEEEEECCCSCSCHHHHHHHHTTTTTTTTCCCSEEE-EET-T--EEEEEECCCCCSSTTCCSSCHHHHHHHHHHS----
T ss_pred CEEEEEEEecCCCCccCHHHHHHHHHHHcCCCEEEEE-eCC-C--eEEEEEeccccchhhHHHHHHHHHHHhccCC----
Confidence 5667777764 678999999999999999987655 222 1 1236665433211000112334444444211
Q ss_pred CccceeeeCCCCceeEEEEEcC---CCcchHHHHHHHHHhCCCcEEEEEEEeeCCeeEEEEEEEe
Q 024087 103 SLRSSVGVMPTEEHTSIEFTGT---DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164 (272)
Q Consensus 103 ~~~~~v~~~~~~~~T~Iev~~~---DRpGLL~~It~vL~~~g~~I~~A~i~T~g~rv~dvFyVtd 164 (272)
.+.. ..+...|.+.|. ..||+.+.+..+|.+ +||.. .++|..-.++-+|.+
T Consensus 379 ----~v~~--~~~~a~vsvVG~gm~~~~gv~~~~f~aL~~--ini~m---Isqg~Se~~Is~vV~ 432 (449)
T 2j0w_A 379 ----RVEV--EEGLALVALIGNDLSKACGVGKEVFGVLEP--FNIRM---ICYGASSHNLCFLVP 432 (449)
T ss_dssp ----CEEE--EEEEEEEEEEESSCTTSSSHHHHHHSSCTT--SCCCE---EEESSCTTEEEEEEE
T ss_pred ----eEEE--eCCeEEEEEECCCccccccHHHHHHHHHhC--CCeEE---EEecCCCcEEEEEEe
Confidence 1111 123457888887 589999999999976 66653 355544444444545
No 85
>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}
Probab=27.62 E-value=1.3e+02 Score=22.61 Aligned_cols=39 Identities=13% Similarity=0.176 Sum_probs=29.4
Q ss_pred HHHHHHHHHhCCCcEEEEEEEeeCCeeEEEEEEEeCCCCCCCC
Q 024087 130 FSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 172 (272)
Q Consensus 130 L~~It~vL~~~g~~I~~A~i~T~g~rv~dvFyVtd~~~G~~i~ 172 (272)
+.++.+.|.+.|+.+...-.....+ -.||+.| +.|..++
T Consensus 76 ~d~~~~~l~~~G~~v~~~p~~~~~G---~~~~~~D-PdG~~ie 114 (144)
T 3r6a_A 76 LDKFKTFLEENGAEIIRGPSKVPTG---RNMTVRH-SDGSVIE 114 (144)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEETTE---EEEEEEC-TTSCEEE
T ss_pred HHHHHHHHHHcCCEEecCCccCCCc---eEEEEEC-CCCCEEE
Confidence 7788889999999987765444333 3589999 8888773
No 86
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=27.61 E-value=73 Score=29.91 Aligned_cols=63 Identities=16% Similarity=0.208 Sum_probs=42.5
Q ss_pred CceeEEEEEc---CCCcchHHHHHHHHHhCCCcEEEEEEEeeCCeeEEEEEEEeCCCCCCCCCHHHHHHHHHHh
Q 024087 114 EEHTSIEFTG---TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 184 (272)
Q Consensus 114 ~~~T~Iev~~---~DRpGLL~~It~vL~~~g~~I~~A~i~T~g~rv~dvFyVtd~~~G~~i~d~~~l~~i~~~L 184 (272)
.+.+.|.|.+ .++||++++|..+|+++|+||....-.|. + ..-.|.|.. .. ..+.++.|++.+
T Consensus 316 ~~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~ts-e-~~Is~~V~~-~d-----~~~a~~~L~~~l 381 (473)
T 3c1m_A 316 KNVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGSS-E-TNISLVVSE-ED-----VDKALKALKREF 381 (473)
T ss_dssp EEEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEECCT-T-CCEEEEEEG-GG-----HHHHHHHHHHHH
T ss_pred CCeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEecCC-C-CEEEEEEec-hH-----HHHHHHHHHHHH
Confidence 4577888886 67899999999999999999977654332 2 333466644 11 134455666655
No 87
>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*
Probab=27.41 E-value=1.1e+02 Score=22.05 Aligned_cols=51 Identities=16% Similarity=0.122 Sum_probs=35.0
Q ss_pred eEEEEEEecCCCcHHHHHHHHHHh---CCceEEEEEEEecCCEEEEEEEEEcCCCCCC
Q 024087 27 ATVIKVDSVNKHGILLQVIQVLND---VNLVIKKAYISSDGGWFMDVFNVIDCDGKKI 81 (272)
Q Consensus 27 ~t~V~V~s~DrpGLl~~v~~vL~d---~gl~I~~A~I~T~gg~~~dvF~V~d~~G~~~ 81 (272)
...+.+...|. .-+.++...|.. .|+.|...-.....| -.|++.|++|+.+
T Consensus 73 ~~~~~~~v~~~-~dv~~~~~~l~~~~~~G~~~~~~p~~~~~g---~~~~~~DPdGn~i 126 (132)
T 3sk2_A 73 FSEIGIMLPTG-EDVDKLFNEWTKQKSHQIIVIKEPYTDVFG---RTFLISDPDGHII 126 (132)
T ss_dssp CEEEEEEESSH-HHHHHHHHHHHHCSSSCCEEEEEEEEETTE---EEEEEECTTCCEE
T ss_pred cceEEEEeCCH-HHHHHHHHHHHhhhcCCCEEeeCCcccCce---EEEEEECCCCCEE
Confidence 34456665553 346677788888 999998765444444 4588999999864
No 88
>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*
Probab=27.12 E-value=1.4e+02 Score=21.70 Aligned_cols=53 Identities=15% Similarity=0.001 Sum_probs=35.3
Q ss_pred CeEEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCC
Q 024087 26 DATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKI 81 (272)
Q Consensus 26 ~~t~V~V~s~DrpGLl~~v~~vL~d~gl~I~~A~I~T~gg~~~dvF~V~d~~G~~~ 81 (272)
+...+.+...++ .=+..+...|.+.|+.+...-.....| .-.++++|++|+.+
T Consensus 71 ~~~~l~f~v~~~-~dv~~~~~~l~~~G~~~~~~~~~~~~g--~~~~~~~DPdG~~i 123 (138)
T 2a4x_A 71 HRFAIAFEFPDT-ASVDKKYAELVDAGYEGHLKPWNAVWG--QRYAIVKDPDGNVV 123 (138)
T ss_dssp CSEEEEEECSSH-HHHHHHHHHHHHTTCCEEEEEEEETTT--EEEEEEECTTCCEE
T ss_pred CeEEEEEEeCCH-HHHHHHHHHHHHCCCceeeCCcccCCC--cEEEEEECCCCCEE
Confidence 445566665532 236777888899999988654444444 23578899999864
No 89
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=27.11 E-value=52 Score=31.47 Aligned_cols=69 Identities=14% Similarity=0.217 Sum_probs=44.0
Q ss_pred CCceeEEEEEc---CCCcchHHHHHHHHHhCCCcEEEEEEEeeCCeeEEEEEEEeCCCCCCCC-CHHHHHHHHHHhcc
Q 024087 113 TEEHTSIEFTG---TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK-DPKRLSTIKELLFN 186 (272)
Q Consensus 113 ~~~~T~Iev~~---~DRpGLL~~It~vL~~~g~~I~~A~i~T~g~rv~dvFyVtd~~~G~~i~-d~~~l~~i~~~L~~ 186 (272)
..+.+.|.|.+ .++||++++|..+|+++|++|.... | + ...-.|+|.. ....... ..+.++.+.+.|..
T Consensus 338 ~~~~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I~--s-s-e~sis~~v~~-~~~~~~~~~~~~l~~~~~el~~ 410 (510)
T 2cdq_A 338 KRNVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVVA--T-S-EVSISLTLDP-SKLWSRELIQQELDHVVEELEK 410 (510)
T ss_dssp EEEEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEEE--E-E-TTEEEEEECC-GGGSSSCCCHHHHHHHHHHHTT
T ss_pred cCCeEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEEEE--e-C-CCeEEEEEec-hHhhhhhHHHHHHHHHHHHhCC
Confidence 34577888886 6899999999999999999998873 2 1 2334466643 2111110 13455666655543
No 90
>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}
Probab=26.76 E-value=1.8e+02 Score=20.93 Aligned_cols=47 Identities=13% Similarity=0.020 Sum_probs=33.9
Q ss_pred EEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCC
Q 024087 29 VIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKI 81 (272)
Q Consensus 29 ~V~V~s~DrpGLl~~v~~vL~d~gl~I~~A~I~T~gg~~~dvF~V~d~~G~~~ 81 (272)
.+.+...| +..+...|...|..|...-.....|. -.|++.|++|+.+
T Consensus 71 ~~~~~v~d----v~~~~~~l~~~G~~~~~~~~~~~~g~--~~~~~~DPdG~~i 117 (137)
T 3itw_A 71 QVIVWVSD----VDEHFMRSTAAGADIVQPLQDKPWGL--RQYLVRDLEGHLW 117 (137)
T ss_dssp EEEEEESC----HHHHHHHHHHTTCEEEEEEEEETTTE--EEEEEECSSSCEE
T ss_pred EEEEEeCC----HHHHHHHHHHcCCeeccCccccCCCc--EEEEEECCCCCEE
Confidence 56666665 67778888999999887655554442 3578999999954
No 91
>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=26.26 E-value=1.1e+02 Score=22.03 Aligned_cols=43 Identities=9% Similarity=0.067 Sum_probs=30.9
Q ss_pred cHHHHHHHHHHhCCceEEEEEEEe-cC-CEEEEEEEEEcCCCCCC
Q 024087 39 GILLQVIQVLNDVNLVIKKAYISS-DG-GWFMDVFNVIDCDGKKI 81 (272)
Q Consensus 39 GLl~~v~~vL~d~gl~I~~A~I~T-~g-g~~~dvF~V~d~~G~~~ 81 (272)
.=+..+...|.+.|+.+...-... .+ .+..-.|++.|++|+.+
T Consensus 79 ~d~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~i 123 (135)
T 3rri_A 79 KHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLL 123 (135)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEE
T ss_pred HhHHHHHHHHHHcCCceecCcccccCCCCCceEEEEEECCCCCEE
Confidence 447888999999999998766553 11 12233688999999964
No 92
>3m2o_A Glyoxalase/bleomycin resistance protein; unknown function, structural genomics, putative glyoxylase/B resistance protein; HET: PG4; 1.35A {Rhodopseudomonas palustris} PDB: 3vcx_A*
Probab=26.25 E-value=1.1e+02 Score=23.36 Aligned_cols=47 Identities=17% Similarity=0.137 Sum_probs=32.2
Q ss_pred EEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCC
Q 024087 29 VIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKI 81 (272)
Q Consensus 29 ~V~V~s~DrpGLl~~v~~vL~d~gl~I~~A~I~T~gg~~~dvF~V~d~~G~~~ 81 (272)
.+.+...| +..+...|...|+.|...-.... |..-.|++.|++|+.+
T Consensus 93 ~l~~~v~d----vd~~~~~l~~~G~~~~~~~~~~~--~g~~~~~~~DPdG~~i 139 (164)
T 3m2o_A 93 ILNFEVDD----PDREYARLQQAGLPILLTLRDED--FGQRHFITADPNGVLI 139 (164)
T ss_dssp EEEEECSC----HHHHHHHHHHTTCCCSEEEEEC-----CEEEEEECTTCCEE
T ss_pred EEEEEECC----HHHHHHHHHHCCCceecCccccC--CCcEEEEEECCCCCEE
Confidence 46677766 88888899999998865433332 2233477999999954
No 93
>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}
Probab=25.79 E-value=69 Score=23.91 Aligned_cols=42 Identities=10% Similarity=0.079 Sum_probs=31.3
Q ss_pred hHHHHHHHHHhCCCcEEEEEEEeeCCe-eEEEEEEEeCCCCCCC
Q 024087 129 LFSEVCAVLADLHCNVVNAEIWTHNDR-AAAVVHVTDHSTGYAI 171 (272)
Q Consensus 129 LL~~It~vL~~~g~~I~~A~i~T~g~r-v~dvFyVtd~~~G~~i 171 (272)
=|.++.+.|.+.|+.+........+.+ ..-.||+.| +.|..|
T Consensus 100 dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~D-PdGn~i 142 (147)
T 3zw5_A 100 PLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRD-PDRNLI 142 (147)
T ss_dssp CHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEEC-TTCCEE
T ss_pred CHHHHHHHHHHcCCceeeCcccccCCCCceEEEEEEC-CCCCEE
Confidence 367788889999999987665544443 345789999 889876
No 94
>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}
Probab=25.41 E-value=63 Score=22.88 Aligned_cols=49 Identities=12% Similarity=0.069 Sum_probs=33.5
Q ss_pred eEEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCC
Q 024087 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKI 81 (272)
Q Consensus 27 ~t~V~V~s~DrpGLl~~v~~vL~d~gl~I~~A~I~T~gg~~~dvF~V~d~~G~~~ 81 (272)
..-+.+...| +.++...|...|+.+........+|. -.+++.|++|+.+
T Consensus 82 ~~~~~~~v~d----~~~~~~~l~~~G~~~~~~~~~~~~g~--~~~~~~DPdG~~i 130 (134)
T 3l7t_A 82 LRHLAFYVED----VEASRQELIALGIRVEEVRYDDYTGK--KMAFFFDPDGLPL 130 (134)
T ss_dssp EEEEEEECSC----HHHHHHHHHHHTCCCCCCEECTTSCC--EEEEEECTTCCEE
T ss_pred eEEEEEEECC----HHHHHHHHHhCCCcccceeccCCCce--EEEEEECCCCCEE
Confidence 3456666666 78888999999999864433323332 2478889999864
No 95
>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}
Probab=25.32 E-value=1.5e+02 Score=21.59 Aligned_cols=51 Identities=12% Similarity=0.021 Sum_probs=33.8
Q ss_pred EEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCC
Q 024087 28 TVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKI 81 (272)
Q Consensus 28 t~V~V~s~DrpGLl~~v~~vL~d~gl~I~~A~I~T~gg~~~dvF~V~d~~G~~~ 81 (272)
..+.+...|+ .=+.++...|.+.|+.+...-.....| .-.++++|++|+.+
T Consensus 77 ~~~~f~v~~~-~dv~~~~~~l~~~G~~~~~~~~~~~~g--~~~~~~~DPdG~~i 127 (141)
T 2rbb_A 77 FLLNFDVDTK-EAVDKLVPVAIAAGATLIKAPYETYYH--WYQAVLLDPERNVF 127 (141)
T ss_dssp EEEEEECSCH-HHHHHHHHHHHHTTCEEEEEEEECTTS--EEEEEEECTTSCEE
T ss_pred EEEEEEcCCH-HHHHHHHHHHHHcCCeEecCccccCCc--cEEEEEECCCCCEE
Confidence 3555555542 246778888999999987664433333 33578899999864
No 96
>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A
Probab=24.97 E-value=1.8e+02 Score=20.46 Aligned_cols=51 Identities=20% Similarity=0.095 Sum_probs=35.1
Q ss_pred CeEEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCC
Q 024087 26 DATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKI 81 (272)
Q Consensus 26 ~~t~V~V~s~DrpGLl~~v~~vL~d~gl~I~~A~I~T~gg~~~dvF~V~d~~G~~~ 81 (272)
+...+.+...| +.++...|...|+.+...-.....|.. -.+++.|++|+.+
T Consensus 71 ~~~~~~~~v~d----~~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~~DPdG~~i 121 (135)
T 1f9z_A 71 AYGHIALSVDN----AAEACEKIRQNGGNVTREAGPVKGGTT-VIAFVEDPDGYKI 121 (135)
T ss_dssp SEEEEEEECSC----HHHHHHHHHHTTCEEEEEEEECTTSCC-EEEEEECTTSCEE
T ss_pred CccEEEEEeCC----HHHHHHHHHHCCCEEecCCccCCCCce-eEEEEECCCCCEE
Confidence 44456777766 678889999999998875433443421 1367899999854
No 97
>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=24.64 E-value=1.1e+02 Score=21.98 Aligned_cols=44 Identities=5% Similarity=-0.009 Sum_probs=31.8
Q ss_pred chHHHHHHHHHhCCCcEEEEEEEe-eCCe-eEEEEEEEeCCCCCCCC
Q 024087 128 GLFSEVCAVLADLHCNVVNAEIWT-HNDR-AAAVVHVTDHSTGYAIK 172 (272)
Q Consensus 128 GLL~~It~vL~~~g~~I~~A~i~T-~g~r-v~dvFyVtd~~~G~~i~ 172 (272)
.=+.++.+.|.+.|+.+...-... .+.. ..-.||+.| +.|..|+
T Consensus 79 ~d~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~D-PdGn~ie 124 (135)
T 3rri_A 79 KHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLID-PSNNLLE 124 (135)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEEESTTSTTCEEEEEEEC-TTCCEEE
T ss_pred HhHHHHHHHHHHcCCceecCcccccCCCCCceEEEEEEC-CCCCEEE
Confidence 347888888999999997765553 2322 335799999 8898763
No 98
>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}
Probab=23.99 E-value=1.2e+02 Score=22.45 Aligned_cols=42 Identities=19% Similarity=0.127 Sum_probs=30.3
Q ss_pred HHHHHHHHHHhCCceEEEEEEEec-CCEEEEEEEEEcCCCCCC
Q 024087 40 ILLQVIQVLNDVNLVIKKAYISSD-GGWFMDVFNVIDCDGKKI 81 (272)
Q Consensus 40 Ll~~v~~vL~d~gl~I~~A~I~T~-gg~~~dvF~V~d~~G~~~ 81 (272)
=+.++...|...|+.|...-.... +....-.|++.|++|+.+
T Consensus 100 dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~i 142 (147)
T 3zw5_A 100 PLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLI 142 (147)
T ss_dssp CHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEE
T ss_pred CHHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEE
Confidence 477888899999999987655432 222334678999999864
No 99
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=23.88 E-value=2.3e+02 Score=26.94 Aligned_cols=122 Identities=16% Similarity=0.135 Sum_probs=76.0
Q ss_pred eEEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCCCcHHHHHHHHHHHhcccC----CCC
Q 024087 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKIRDKEVIDYIQQRLETDAS----FAP 102 (272)
Q Consensus 27 ~t~V~V~s~DrpGLl~~v~~vL~d~gl~I~~A~I~T~gg~~~dvF~V~d~~G~~~~~~~~~~~I~~aL~~~~~----~~~ 102 (272)
...+.|.-+||||-|.+++.+|. +-||.+-.=...+.....++....-.+. ++..+.|.+.|..... +..
T Consensus 338 ~~~~~v~~p~~pg~l~~~~~~l~--~~~i~~~~~~~~~~~~~~~~~~~e~~~~----~~~~~~~~~~l~~~g~~~~~~~~ 411 (514)
T 1tdj_A 338 EALLAVTIPEEKGSFLKFCQLLG--GRSVTEFNYRFADAKNACIFVGVRLSRG----LEERKEILQMLNDGGYSVVDLSD 411 (514)
T ss_dssp EEEEEEECCBSSSCSHHHHHTTS--SSEEEEEEEECCCSSBCEEEEEEECSST----HHHHHHHHHHHTSSSCEEETTSS
T ss_pred cccccccCCCCCchHHHHHHHhC--CCceEEEEeeccCCCeEEEEEEEEeCCc----HHHHHHHHHHHHhCCCCeEECCC
Confidence 35677888999999999999988 6777765432212112233443332221 3567788888876531 111
Q ss_pred ------CccceeeeC-C-CCceeEEEEEcCCCcchHHHHHHHHHhCCCcEEEEEEEeeCCe
Q 024087 103 ------SLRSSVGVM-P-TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 155 (272)
Q Consensus 103 ------~~~~~v~~~-~-~~~~T~Iev~~~DRpGLL~~It~vL~~~g~~I~~A~i~T~g~r 155 (272)
..+--|+-. + ..+.-+....=+.|||-|.+.-..|.. +-||.--+-..||..
T Consensus 412 ~~~~~~h~~~~~g~~~~~~~~e~~~~~~fpe~~gal~~fl~~~~~-~~~i~~~~yr~~g~~ 471 (514)
T 1tdj_A 412 DEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGT-YWNISLFHYRSHGTD 471 (514)
T ss_dssp CHHHHHTGGGTCCCCCSSCCCCEEEEEECCCCTTHHHHHHHHHCS-CCCCCEEECBCTTTC
T ss_pred CHHHHHHHHHhhCCcCccCCCceEEEEeCCCCCCHHHHHHHhcCC-CceEEEEeecCCCCC
Confidence 011112211 1 223456777799999999999988875 678888888888854
No 100
>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*
Probab=23.56 E-value=1.1e+02 Score=21.62 Aligned_cols=49 Identities=14% Similarity=0.209 Sum_probs=34.2
Q ss_pred EEEEcCCCcchHHHHHHHHHhCCCcEEEEEEEeeCC-eeEEEEEEEeCCCCCCC
Q 024087 119 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAI 171 (272)
Q Consensus 119 Iev~~~DRpGLL~~It~vL~~~g~~I~~A~i~T~g~-rv~dvFyVtd~~~G~~i 171 (272)
+-+...| =+.++.+.|.+.|+.+...-....+. ...-.||+.| +.|..+
T Consensus 76 ~~~~v~d---d~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~D-PdG~~i 125 (133)
T 3ey7_A 76 LCFITDT---VLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRD-PDGNLI 125 (133)
T ss_dssp EEEECSS---CHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEEC-TTCCEE
T ss_pred EEEEeCc---HHHHHHHHHHHCCCccccCCccccCCCCCeEEEEEEC-CCCCEE
Confidence 3444444 27888889999999998765444433 3446799999 788865
No 101
>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6
Probab=23.18 E-value=92 Score=22.79 Aligned_cols=47 Identities=6% Similarity=0.143 Sum_probs=33.2
Q ss_pred EEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCC
Q 024087 29 VIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKI 81 (272)
Q Consensus 29 ~V~V~s~DrpGLl~~v~~vL~d~gl~I~~A~I~T~gg~~~dvF~V~d~~G~~~ 81 (272)
-+.+...| +..+...|...|+.+...-.....|. -.+++.|++|+.+
T Consensus 98 hl~~~v~d----~~~~~~~l~~~G~~~~~~~~~~~~g~--~~~~~~DPdG~~i 144 (153)
T 1ss4_A 98 RVMFTVED----IDEMVSRLTKHGAELVGEVVQYENSY--RLCYIRGVEGILI 144 (153)
T ss_dssp EEEEEESC----HHHHHHHHHHTTCEESSCCEEETTTE--EEEEEECGGGCEE
T ss_pred EEEEEeCC----HHHHHHHHHHCCCeecCCCcccCCce--EEEEEECCCCCEE
Confidence 56666666 88899999999998865433333443 3477899999854
No 102
>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}
Probab=22.86 E-value=77 Score=22.21 Aligned_cols=47 Identities=17% Similarity=0.201 Sum_probs=31.4
Q ss_pred EEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCC
Q 024087 29 VIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKI 81 (272)
Q Consensus 29 ~V~V~s~DrpGLl~~v~~vL~d~gl~I~~A~I~T~gg~~~dvF~V~d~~G~~~ 81 (272)
-+.+...| +.++...|...|+.+.........|. -.+++.|++|+.+
T Consensus 76 ~~~~~v~d----~~~~~~~l~~~G~~~~~~~~~~~~g~--~~~~~~DPdG~~i 122 (126)
T 2p25_A 76 HLAFKVEH----IEEVIAFLNEQGIETEPLRVDDFTGK--KMTFFFDPDGLPL 122 (126)
T ss_dssp CEEEECSC----HHHHHHHHHHTTCCCCCCEECTTTCC--EEEEEECTTCCEE
T ss_pred EEEEEeCC----HHHHHHHHHHcCCccccccccCCCCc--EEEEEECCCCCEE
Confidence 45555555 67788899999998864332223342 3478899999864
No 103
>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2
Probab=22.20 E-value=1.4e+02 Score=20.71 Aligned_cols=39 Identities=21% Similarity=0.146 Sum_probs=28.1
Q ss_pred HHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCC
Q 024087 41 LLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKI 81 (272)
Q Consensus 41 l~~v~~vL~d~gl~I~~A~I~T~gg~~~dvF~V~d~~G~~~ 81 (272)
+.++...|...|+.+...-.....| .-.+++.|++|+.+
T Consensus 75 ~~~~~~~l~~~G~~~~~~~~~~~~g--~~~~~~~DPdG~~i 113 (119)
T 2pjs_A 75 FDEVHARILKAGLPIEYGPVTEAWG--VQRLFLRDPFGKLI 113 (119)
T ss_dssp HHHHHHHHHHTTCCCSEEEEECTTS--CEEEEEECTTSCEE
T ss_pred HHHHHHHHHHCCCccccCCccCCCc--cEEEEEECCCCCEE
Confidence 7788889999999987654333334 23478899999864
No 104
>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A
Probab=21.91 E-value=1.6e+02 Score=20.94 Aligned_cols=53 Identities=11% Similarity=-0.013 Sum_probs=0.0
Q ss_pred CCeEEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCC
Q 024087 25 ADATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKI 81 (272)
Q Consensus 25 ~~~t~V~V~s~DrpGLl~~v~~vL~d~gl~I~~A~I~T~gg~~~dvF~V~d~~G~~~ 81 (272)
.+..-|.+...| +..+...|.+.|+.+...-.-..+.+-.-.+++.|++|+.+
T Consensus 76 ~g~~hiaf~v~d----i~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~dPdG~~i 128 (133)
T 3hdp_A 76 STPYHICYEVED----IQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGLI 128 (133)
T ss_dssp CEEEEEEEEESC----HHHHHHHHTTTTEEEEEEEEEEGGGTTEEEEEEEETTTEEE
T ss_pred CceEEEEEEcCC----HHHHHHHHHHcCCccccCCeecccCCCceEEEEECCCceEE
No 105
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=21.82 E-value=60 Score=25.36 Aligned_cols=32 Identities=25% Similarity=0.303 Sum_probs=27.0
Q ss_pred CeEEEEEEec---CCCcHHHHHHHHHHhCCceEEE
Q 024087 26 DATVIKVDSV---NKHGILLQVIQVLNDVNLVIKK 57 (272)
Q Consensus 26 ~~t~V~V~s~---DrpGLl~~v~~vL~d~gl~I~~ 57 (272)
++-.++|.++ |-.|+++.++..|++.|+.|+-
T Consensus 61 ~wr~i~v~~~l~~~~vGilA~is~pLA~agIsif~ 95 (134)
T 1zhv_A 61 GWSCFKFQGPFAFDETGIVLSVISPLSTNGIGIFV 95 (134)
T ss_dssp EEEEEEECSCCCCSSCCHHHHHHHHHHTTTCCCEE
T ss_pred CeEEEEEecCCCccHHHHHHHHHHHHHhCCCCeEE
Confidence 5667777665 7889999999999999999874
No 106
>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}
Probab=21.78 E-value=2.4e+02 Score=20.57 Aligned_cols=48 Identities=21% Similarity=0.108 Sum_probs=32.8
Q ss_pred EEEEecCCCcHHHHHHHHHHh-CCceEEEEEEEec-----CCEEEEEEEEEcCCCCCC
Q 024087 30 IKVDSVNKHGILLQVIQVLND-VNLVIKKAYISSD-----GGWFMDVFNVIDCDGKKI 81 (272)
Q Consensus 30 V~V~s~DrpGLl~~v~~vL~d-~gl~I~~A~I~T~-----gg~~~dvF~V~d~~G~~~ 81 (272)
+.+...| +.++...|.. .|+.|...-..+. .++..-.|++.|++|+.+
T Consensus 77 ~~~~v~d----vd~~~~~l~~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~DPdG~~i 130 (145)
T 2rk9_A 77 FQWDVID----IEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGYLF 130 (145)
T ss_dssp EEEECSC----HHHHHHHHHHHHGGGEEEEEEEEEC-----CCEEEEEEEECTTCCEE
T ss_pred EEEEECC----HHHHHHHHHhhCCCeEecCccccccccCCCCCcceEEEEECCCCCEE
Confidence 6666665 6677788888 9999876543321 234445688999999864
No 107
>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}
Probab=21.26 E-value=1.5e+02 Score=22.25 Aligned_cols=51 Identities=14% Similarity=0.176 Sum_probs=35.2
Q ss_pred eEEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEecCCEEEEEEEEEcCCCCCC
Q 024087 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISSDGGWFMDVFNVIDCDGKKI 81 (272)
Q Consensus 27 ~t~V~V~s~DrpGLl~~v~~vL~d~gl~I~~A~I~T~gg~~~dvF~V~d~~G~~~ 81 (272)
...+.+...|. .-+..+...|...|+.|...-.....| -.|+++|++|+.+
T Consensus 68 ~~~l~f~v~d~-~dvd~~~~~l~~~G~~i~~~p~~~~~G---~~~~~~DPdG~~i 118 (148)
T 3rhe_A 68 GMELSFQVNSN-EMVDEIHRQWSDKEISIIQPPTQMDFG---YTFVGVDPDEHRL 118 (148)
T ss_dssp CEEEEEECSCH-HHHHHHHHHHHHTTCCEEEEEEEETTE---EEEEEECTTCCEE
T ss_pred eEEEEEEcCCH-HHHHHHHHHHHhCCCEEEeCCeecCCC---cEEEEECCCCCEE
Confidence 44555555552 347778888899999998765444444 3578899999954
No 108
>1zvp_A Hypothetical protein VC0802; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 2.20A {Vibrio cholerae} SCOP: d.58.18.9 d.58.18.9
Probab=21.21 E-value=1.3e+02 Score=23.44 Aligned_cols=35 Identities=11% Similarity=0.127 Sum_probs=28.9
Q ss_pred CCCeEEEEEEe---cCCCcHHHHHHHHHHhCCceEEEE
Q 024087 24 CADATVIKVDS---VNKHGILLQVIQVLNDVNLVIKKA 58 (272)
Q Consensus 24 ~~~~t~V~V~s---~DrpGLl~~v~~vL~d~gl~I~~A 58 (272)
+.++..+++.+ -|-.|+++.++..|++.|+.|+--
T Consensus 68 ~~~wr~i~l~~~~~l~~vGi~a~is~~LA~agIsif~i 105 (133)
T 1zvp_A 68 SALFSLITLTVHSSLEAVGLTAAFATKLAEHGISANVI 105 (133)
T ss_dssp CSCEEEEEEECCC--CCSCHHHHHHHHHHHTTCCCEEE
T ss_pred CCCeEEEEEeccCCccHHHHHHHHHHHHHhCCCCcEEE
Confidence 45777888866 689999999999999999999843
No 109
>2qsw_A Methionine import ATP-binding protein METN 2; ABC transporter, structural genomics, APC87322.1, PSI-2, protein structure initiative; 1.50A {Enterococcus faecalis} SCOP: d.58.18.13
Probab=21.07 E-value=1.2e+02 Score=21.71 Aligned_cols=37 Identities=8% Similarity=0.166 Sum_probs=31.5
Q ss_pred cchHHHHHHHHHhCCCcEEEEEEEeeCCeeEEEEEEEe
Q 024087 127 PGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 164 (272)
Q Consensus 127 pGLL~~It~vL~~~g~~I~~A~i~T~g~rv~dvFyVtd 164 (272)
..+++++++.+ ...+||..|.|...+++....+.|.=
T Consensus 37 ~pvis~l~~~~-~v~vnIl~g~i~~i~~~~~G~L~v~l 73 (100)
T 2qsw_A 37 LPIISHIVQEY-QVEVSIIQGNIQQTKQGAVGSLYIQL 73 (100)
T ss_dssp SCHHHHHHHHH-TCEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred chHHHHHHHHh-CCCEEEEEeeceEcCCeeEEEEEEEE
Confidence 56888888877 57899999999999999988888864
No 110
>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*
Probab=20.37 E-value=1.8e+02 Score=20.96 Aligned_cols=50 Identities=18% Similarity=0.084 Sum_probs=31.9
Q ss_pred EEEEEcCCCcchHHHHHHHHHhCCCcEEEEEEEeeCCeeEEEEEEEeCCCCCCC
Q 024087 118 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 171 (272)
Q Consensus 118 ~Iev~~~DRpGLL~~It~vL~~~g~~I~~A~i~T~g~rv~dvFyVtd~~~G~~i 171 (272)
.|-+...++.. +.++.+.|.+.|+.+...-.....+ .-.+|++| ..|..+
T Consensus 74 ~l~f~v~~~~d-v~~~~~~l~~~G~~~~~~~~~~~~g--~~~~~~~D-PdG~~i 123 (138)
T 2a4x_A 74 AIAFEFPDTAS-VDKKYAELVDAGYEGHLKPWNAVWG--QRYAIVKD-PDGNVV 123 (138)
T ss_dssp EEEEECSSHHH-HHHHHHHHHHTTCCEEEEEEEETTT--EEEEEEEC-TTCCEE
T ss_pred EEEEEeCCHHH-HHHHHHHHHHCCCceeeCCcccCCC--cEEEEEEC-CCCCEE
Confidence 44455543222 6677788889999987653332222 45689999 788876
No 111
>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0
Probab=20.17 E-value=58 Score=23.07 Aligned_cols=51 Identities=14% Similarity=0.132 Sum_probs=34.0
Q ss_pred eEEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEe-cCCEEEEEEEEEcCCCCCC
Q 024087 27 ATVIKVDSVNKHGILLQVIQVLNDVNLVIKKAYISS-DGGWFMDVFNVIDCDGKKI 81 (272)
Q Consensus 27 ~t~V~V~s~DrpGLl~~v~~vL~d~gl~I~~A~I~T-~gg~~~dvF~V~d~~G~~~ 81 (272)
..-+.+...| +.++...|...|+.+....... .+|+.+-.|+++|++|+.+
T Consensus 78 ~~hi~~~v~d----~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~DPdG~~i 129 (134)
T 3rmu_A 78 MHHICIEVDN----INAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLV 129 (134)
T ss_dssp EEEEEEEESC----HHHHHHHHHHTTCTTBCCCCEECTTSSEEEEECSCSSCCSCE
T ss_pred ceEEEEEcCC----HHHHHHHHHHcCCcccCCCcccCCCCceEEEEecCCCCcEEE
Confidence 3556666666 7788999999999986653333 3454443344589999864
Done!